###################################
345 groups of orthologs
406 in-paralogs from P.kodakaraensis
1213 in-paralogs from T.vaginalis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 739 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:739 T.vaginalis:96

Q5JE32              	100.00%		A2E7H8              	100.00%
Bootstrap support for Q5JE32 as seed ortholog is 100%.
Bootstrap support for A2E7H8 as seed ortholog is 91%.

Group of orthologs #2. Best score 598 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:598 T.vaginalis:221

Q5JE33              	100.00%		A2DKT1              	100.00%
Bootstrap support for Q5JE33 as seed ortholog is 100%.
Bootstrap support for A2DKT1 as seed ortholog is 99%.

Group of orthologs #3. Best score 564 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:564 T.vaginalis:215

Q9V2X2              	100.00%		A2EP65              	100.00%
Q5JE98              	51.70%		
Bootstrap support for Q9V2X2 as seed ortholog is 100%.
Bootstrap support for A2EP65 as seed ortholog is 100%.

Group of orthologs #4. Best score 554 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:554 T.vaginalis:554

Q5JIR3              	100.00%		A2ED49              	100.00%
Bootstrap support for Q5JIR3 as seed ortholog is 100%.
Bootstrap support for A2ED49 as seed ortholog is 100%.

Group of orthologs #5. Best score 544 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:544 T.vaginalis:544

Q5JIR2              	100.00%		A2ES57              	100.00%
                    	       		A2F133              	100.00%
Bootstrap support for Q5JIR2 as seed ortholog is 100%.
Bootstrap support for A2ES57 as seed ortholog is 100%.
Bootstrap support for A2F133 as seed ortholog is 100%.

Group of orthologs #6. Best score 527 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:527 T.vaginalis:446

Q5JDX6              	100.00%		A2DCI8              	100.00%
Bootstrap support for Q5JDX6 as seed ortholog is 100%.
Bootstrap support for A2DCI8 as seed ortholog is 100%.

Group of orthologs #7. Best score 471 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:471 T.vaginalis:471

Q5JJ31              	100.00%		A2FF46              	100.00%
Bootstrap support for Q5JJ31 as seed ortholog is 100%.
Bootstrap support for A2FF46 as seed ortholog is 100%.

Group of orthologs #8. Best score 467 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:467 T.vaginalis:158

Q5JCZ1              	100.00%		A2EGQ0              	100.00%
                    	       		A2FSC4              	22.93%
                    	       		A2FD12              	22.18%
Bootstrap support for Q5JCZ1 as seed ortholog is 100%.
Bootstrap support for A2EGQ0 as seed ortholog is 99%.

Group of orthologs #9. Best score 449 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:449 T.vaginalis:204

Q5JFZ3              	100.00%		A2ER26              	100.00%
                    	       		A2ECS2              	89.91%
Bootstrap support for Q5JFZ3 as seed ortholog is 100%.
Bootstrap support for A2ER26 as seed ortholog is 99%.

Group of orthologs #10. Best score 438 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:438 T.vaginalis:161

Q5JFZ4              	100.00%		A2DSF6              	100.00%
                    	       		A2DD88              	18.20%
Bootstrap support for Q5JFZ4 as seed ortholog is 100%.
Bootstrap support for A2DSF6 as seed ortholog is 99%.

Group of orthologs #11. Best score 430 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:430 T.vaginalis:333

Q5JGC7              	100.00%		A2DJ14              	100.00%
                    	       		A2G150              	85.96%
                    	       		A2GCZ6              	82.16%
                    	       		A2F6B9              	81.29%
                    	       		A2EAJ8              	80.41%
Bootstrap support for Q5JGC7 as seed ortholog is 100%.
Bootstrap support for A2DJ14 as seed ortholog is 100%.

Group of orthologs #12. Best score 411 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:411 T.vaginalis:411

Q5JIP3              	100.00%		A2E0C1              	100.00%
Bootstrap support for Q5JIP3 as seed ortholog is 100%.
Bootstrap support for A2E0C1 as seed ortholog is 100%.

Group of orthologs #13. Best score 410 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:410 T.vaginalis:410

Q8NKR7              	100.00%		A2EIB0              	100.00%
Bootstrap support for Q8NKR7 as seed ortholog is 100%.
Bootstrap support for A2EIB0 as seed ortholog is 100%.

Group of orthologs #14. Best score 398 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:398 T.vaginalis:398

Q5JIL7              	100.00%		A2EVS2              	100.00%
Bootstrap support for Q5JIL7 as seed ortholog is 100%.
Bootstrap support for A2EVS2 as seed ortholog is 100%.

Group of orthologs #15. Best score 396 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:276 T.vaginalis:34

Q5JJA2              	100.00%		A2DSN1              	100.00%
                    	       		A2DUX0              	18.02%
Bootstrap support for Q5JJA2 as seed ortholog is 99%.
Bootstrap support for A2DSN1 as seed ortholog is 62%.
Alternative seed ortholog is A2DTP6 (34 bits away from this cluster)

Group of orthologs #16. Best score 383 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:383 T.vaginalis:34

P61111              	100.00%		A2F520              	100.00%
Q52500              	71.39%		
Bootstrap support for P61111 as seed ortholog is 100%.
Bootstrap support for A2F520 as seed ortholog is 79%.

Group of orthologs #17. Best score 379 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:379 T.vaginalis:379

Q5JJ43              	100.00%		A2DI13              	100.00%
Bootstrap support for Q5JJ43 as seed ortholog is 100%.
Bootstrap support for A2DI13 as seed ortholog is 100%.

Group of orthologs #18. Best score 369 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:369 T.vaginalis:21

Q5JGE5              	100.00%		A2FVZ4              	100.00%
Bootstrap support for Q5JGE5 as seed ortholog is 100%.
Bootstrap support for A2FVZ4 as seed ortholog is 71%.
Alternative seed ortholog is A2E2N8 (21 bits away from this cluster)

Group of orthologs #19. Best score 360 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:360 T.vaginalis:198

O93623              	100.00%		A2GDR8              	100.00%
Bootstrap support for O93623 as seed ortholog is 100%.
Bootstrap support for A2GDR8 as seed ortholog is 99%.

Group of orthologs #20. Best score 357 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:357 T.vaginalis:196

Q5JEV6              	100.00%		A2E9S4              	100.00%
                    	       		A2ELB9              	44.37%
                    	       		A2EP01              	43.39%
                    	       		A2EFN8              	41.76%
                    	       		A2EBB4              	35.56%
                    	       		Q5EFD8              	34.58%
                    	       		A2E269              	34.26%
Bootstrap support for Q5JEV6 as seed ortholog is 100%.
Bootstrap support for A2E9S4 as seed ortholog is 100%.

Group of orthologs #21. Best score 347 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:347 T.vaginalis:6

Q5JHS5              	100.00%		A2F7I0              	100.00%
Bootstrap support for Q5JHS5 as seed ortholog is 100%.
Bootstrap support for A2F7I0 as seed ortholog is 56%.
Alternative seed ortholog is A2F9G0 (6 bits away from this cluster)

Group of orthologs #22. Best score 337 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:337 T.vaginalis:259

Q5JF49              	100.00%		A2FGU9              	100.00%
Bootstrap support for Q5JF49 as seed ortholog is 100%.
Bootstrap support for A2FGU9 as seed ortholog is 100%.

Group of orthologs #23. Best score 333 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:333 T.vaginalis:333

Q5JDL3              	100.00%		A2DTI7              	100.00%
Bootstrap support for Q5JDL3 as seed ortholog is 100%.
Bootstrap support for A2DTI7 as seed ortholog is 100%.

Group of orthologs #24. Best score 330 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:330 T.vaginalis:330

Q5JH71              	100.00%		A2DZU8              	100.00%
                    	       		A2FNJ6              	76.04%
                    	       		A2G3K2              	11.17%
Bootstrap support for Q5JH71 as seed ortholog is 100%.
Bootstrap support for A2DZU8 as seed ortholog is 100%.

Group of orthologs #25. Best score 330 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:330 T.vaginalis:18

Q5JIT1              	100.00%		A2DCM5              	100.00%
Bootstrap support for Q5JIT1 as seed ortholog is 100%.
Bootstrap support for A2DCM5 as seed ortholog is 64%.
Alternative seed ortholog is A2DN04 (18 bits away from this cluster)

Group of orthologs #26. Best score 324 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:324 T.vaginalis:324

Q5JJC8              	100.00%		A2FQ92              	100.00%
                    	       		A2E0A3              	71.32%
                    	       		A2F1E7              	15.53%
Bootstrap support for Q5JJC8 as seed ortholog is 100%.
Bootstrap support for A2FQ92 as seed ortholog is 100%.

Group of orthologs #27. Best score 319 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:319 T.vaginalis:153

Q5JHG5              	100.00%		A2DUA9              	100.00%
Bootstrap support for Q5JHG5 as seed ortholog is 100%.
Bootstrap support for A2DUA9 as seed ortholog is 100%.

Group of orthologs #28. Best score 310 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:310 T.vaginalis:310

Q76I93              	100.00%		A2FQR3              	100.00%
                    	       		A2DP65              	63.99%
Bootstrap support for Q76I93 as seed ortholog is 100%.
Bootstrap support for A2FQR3 as seed ortholog is 100%.

Group of orthologs #29. Best score 302 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:302 T.vaginalis:302

Q5JIQ2              	100.00%		Q5S7T0              	100.00%
                    	       		A2DV30              	36.12%
Bootstrap support for Q5JIQ2 as seed ortholog is 100%.
Bootstrap support for Q5S7T0 as seed ortholog is 100%.

Group of orthologs #30. Best score 294 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:294 T.vaginalis:294

Q5JD45              	100.00%		A2ECS1              	100.00%
Bootstrap support for Q5JD45 as seed ortholog is 100%.
Bootstrap support for A2ECS1 as seed ortholog is 100%.

Group of orthologs #31. Best score 292 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:292 T.vaginalis:292

Q5JED2              	100.00%		A2DVT9              	100.00%
                    	       		A2E342              	100.00%
Bootstrap support for Q5JED2 as seed ortholog is 100%.
Bootstrap support for A2DVT9 as seed ortholog is 100%.
Bootstrap support for A2E342 as seed ortholog is 100%.

Group of orthologs #32. Best score 284 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:284 T.vaginalis:284

Q5JFJ2              	100.00%		A2FJ94              	100.00%
Bootstrap support for Q5JFJ2 as seed ortholog is 100%.
Bootstrap support for A2FJ94 as seed ortholog is 100%.

Group of orthologs #33. Best score 279 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:192 T.vaginalis:279

Q5JET4              	100.00%		A2FXT7              	100.00%
                    	       		A2FY08              	19.78%
Bootstrap support for Q5JET4 as seed ortholog is 100%.
Bootstrap support for A2FXT7 as seed ortholog is 100%.

Group of orthologs #34. Best score 279 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:279 T.vaginalis:279

Q5JEW3              	100.00%		A2D8I5              	100.00%
Bootstrap support for Q5JEW3 as seed ortholog is 100%.
Bootstrap support for A2D8I5 as seed ortholog is 100%.

Group of orthologs #35. Best score 278 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:278 T.vaginalis:278

Q5JHC1              	100.00%		A2FRT6              	100.00%
Bootstrap support for Q5JHC1 as seed ortholog is 100%.
Bootstrap support for A2FRT6 as seed ortholog is 100%.

Group of orthologs #36. Best score 271 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:271 T.vaginalis:271

Q5JJE8              	100.00%		A2F410              	100.00%
Bootstrap support for Q5JJE8 as seed ortholog is 100%.
Bootstrap support for A2F410 as seed ortholog is 100%.

Group of orthologs #37. Best score 265 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:265 T.vaginalis:265

Q5JE75              	100.00%		A2FSM1              	100.00%
                    	       		A2ERB4              	95.77%
Bootstrap support for Q5JE75 as seed ortholog is 100%.
Bootstrap support for A2FSM1 as seed ortholog is 100%.

Group of orthologs #38. Best score 259 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:259 T.vaginalis:174

Q68BJ6              	100.00%		A2E501              	100.00%
Q68BJ7              	14.95%		A2EV45              	87.50%
Q6I7B6              	10.12%		
Bootstrap support for Q68BJ6 as seed ortholog is 100%.
Bootstrap support for A2E501 as seed ortholog is 99%.

Group of orthologs #39. Best score 259 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:259 T.vaginalis:259

Q5JEY0              	100.00%		A2DTB8              	100.00%
Bootstrap support for Q5JEY0 as seed ortholog is 100%.
Bootstrap support for A2DTB8 as seed ortholog is 100%.

Group of orthologs #40. Best score 253 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:141 T.vaginalis:151

Q5JJB1              	100.00%		A2FKG4              	100.00%
                    	       		A2FRL9              	71.84%
                    	       		A2DD58              	66.79%
Bootstrap support for Q5JJB1 as seed ortholog is 99%.
Bootstrap support for A2FKG4 as seed ortholog is 99%.

Group of orthologs #41. Best score 253 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:253 T.vaginalis:253

Q76KA7              	100.00%		A2FR77              	100.00%
Bootstrap support for Q76KA7 as seed ortholog is 100%.
Bootstrap support for A2FR77 as seed ortholog is 100%.

Group of orthologs #42. Best score 252 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:252 T.vaginalis:252

Q5JID8              	100.00%		A2EVF8              	100.00%
Bootstrap support for Q5JID8 as seed ortholog is 100%.
Bootstrap support for A2EVF8 as seed ortholog is 100%.

Group of orthologs #43. Best score 248 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:248 T.vaginalis:248

Q5JGN7              	100.00%		A2ECW1              	100.00%
                    	       		A2E0F1              	58.26%
                    	       		A2EA89              	46.87%
Bootstrap support for Q5JGN7 as seed ortholog is 100%.
Bootstrap support for A2ECW1 as seed ortholog is 100%.

Group of orthologs #44. Best score 244 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:136 T.vaginalis:140

Q5JI16              	100.00%		A2EUY0              	100.00%
                    	       		A2G3U5              	94.60%
Bootstrap support for Q5JI16 as seed ortholog is 99%.
Bootstrap support for A2EUY0 as seed ortholog is 99%.

Group of orthologs #45. Best score 243 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:243 T.vaginalis:243

Q6F494              	100.00%		A2E4A4              	100.00%
                    	       		A2EYV2              	99.61%
                    	       		A2ED62              	98.23%
                    	       		A2FLL6              	96.37%
                    	       		A2EKU1              	95.68%
                    	       		A2DSJ5              	43.96%
                    	       		A2ETS2              	35.92%
Bootstrap support for Q6F494 as seed ortholog is 100%.
Bootstrap support for A2E4A4 as seed ortholog is 100%.

Group of orthologs #46. Best score 242 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:242 T.vaginalis:242

Q5JI60              	100.00%		A2EUJ7              	100.00%
Bootstrap support for Q5JI60 as seed ortholog is 100%.
Bootstrap support for A2EUJ7 as seed ortholog is 100%.

Group of orthologs #47. Best score 239 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:239 T.vaginalis:239

Q5JHC6              	100.00%		A2EVG1              	100.00%
Bootstrap support for Q5JHC6 as seed ortholog is 100%.
Bootstrap support for A2EVG1 as seed ortholog is 100%.

Group of orthologs #48. Best score 237 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:237 T.vaginalis:92

Q5JEZ2              	100.00%		A2FHI8              	100.00%
Q5JF48              	5.19%		
Bootstrap support for Q5JEZ2 as seed ortholog is 100%.
Bootstrap support for A2FHI8 as seed ortholog is 99%.

Group of orthologs #49. Best score 235 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:169 T.vaginalis:126

Q5JJ98              	100.00%		A2DYR1              	100.00%
                    	       		A2G193              	40.93%
                    	       		A2EWH8              	6.68%
Bootstrap support for Q5JJ98 as seed ortholog is 100%.
Bootstrap support for A2DYR1 as seed ortholog is 99%.

Group of orthologs #50. Best score 235 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:235 T.vaginalis:36

P77933              	100.00%		A2DDR9              	100.00%
Bootstrap support for P77933 as seed ortholog is 100%.
Bootstrap support for A2DDR9 as seed ortholog is 92%.

Group of orthologs #51. Best score 233 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:233 T.vaginalis:233

Q5JH48              	100.00%		A2FEV4              	100.00%
                    	       		O15565              	59.68%
Bootstrap support for Q5JH48 as seed ortholog is 100%.
Bootstrap support for A2FEV4 as seed ortholog is 100%.

Group of orthologs #52. Best score 233 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:233 T.vaginalis:117

Q5JH16              	100.00%		A2EZH8              	100.00%
Bootstrap support for Q5JH16 as seed ortholog is 100%.
Bootstrap support for A2EZH8 as seed ortholog is 99%.

Group of orthologs #53. Best score 232 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:160 T.vaginalis:134

Q52428              	100.00%		A2DLE4              	100.00%
Bootstrap support for Q52428 as seed ortholog is 99%.
Bootstrap support for A2DLE4 as seed ortholog is 99%.

Group of orthologs #54. Best score 232 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:232 T.vaginalis:232

Q76KA8              	100.00%		A2DJE6              	100.00%
Bootstrap support for Q76KA8 as seed ortholog is 100%.
Bootstrap support for A2DJE6 as seed ortholog is 100%.

Group of orthologs #55. Best score 231 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:231 T.vaginalis:231

Q5JDJ0              	100.00%		A2D873              	100.00%
                    	       		A2DD62              	100.00%
                    	       		A2DYM3              	100.00%
                    	       		A2F9N0              	100.00%
Bootstrap support for Q5JDJ0 as seed ortholog is 100%.
Bootstrap support for A2D873 as seed ortholog is 100%.
Bootstrap support for A2DD62 as seed ortholog is 100%.
Bootstrap support for A2DYM3 as seed ortholog is 100%.
Bootstrap support for A2F9N0 as seed ortholog is 100%.

Group of orthologs #56. Best score 228 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:228 T.vaginalis:228

Q5JIK4              	100.00%		Q8IEV3              	100.00%
                    	       		A2F9L1              	69.87%
                    	       		A2DSU2              	38.18%
                    	       		A2F960              	24.94%
                    	       		A2EJA0              	16.88%
Bootstrap support for Q5JIK4 as seed ortholog is 100%.
Bootstrap support for Q8IEV3 as seed ortholog is 100%.

Group of orthologs #57. Best score 226 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:226 T.vaginalis:11

Q5JFZ6              	100.00%		A2DES1              	100.00%
Bootstrap support for Q5JFZ6 as seed ortholog is 100%.
Bootstrap support for A2DES1 as seed ortholog is 62%.
Alternative seed ortholog is A2DP01 (11 bits away from this cluster)

Group of orthologs #58. Best score 225 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:225 T.vaginalis:225

Q5JGQ1              	100.00%		A2DFI7              	100.00%
                    	       		A2EEC2              	94.42%
                    	       		A2E4Y2              	54.40%
                    	       		A2GQS3              	37.90%
                    	       		A2DIG6              	25.93%
                    	       		A2DI26              	12.16%
                    	       		A2G0Z4              	6.45%
                    	       		A2G010              	6.20%
                    	       		A2G0W0              	5.77%
Bootstrap support for Q5JGQ1 as seed ortholog is 100%.
Bootstrap support for A2DFI7 as seed ortholog is 100%.

Group of orthologs #59. Best score 223 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:223 T.vaginalis:158

Q5JGQ7              	100.00%		A2FCT1              	100.00%
                    	       		A2FTR3              	9.54%
Bootstrap support for Q5JGQ7 as seed ortholog is 100%.
Bootstrap support for A2FCT1 as seed ortholog is 100%.

Group of orthologs #60. Best score 222 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:222 T.vaginalis:222

Q5JF17              	100.00%		A2EXW4              	100.00%
Bootstrap support for Q5JF17 as seed ortholog is 100%.
Bootstrap support for A2EXW4 as seed ortholog is 100%.

Group of orthologs #61. Best score 216 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:216 T.vaginalis:216

Q5JDH2              	100.00%		A2E6Z8              	100.00%
Bootstrap support for Q5JDH2 as seed ortholog is 100%.
Bootstrap support for A2E6Z8 as seed ortholog is 100%.

Group of orthologs #62. Best score 215 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:215 T.vaginalis:131

Q5JGN0              	100.00%		A2GNP0              	100.00%
Bootstrap support for Q5JGN0 as seed ortholog is 100%.
Bootstrap support for A2GNP0 as seed ortholog is 99%.

Group of orthologs #63. Best score 214 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:214 T.vaginalis:214

Q5JI21              	100.00%		A2FDP9              	100.00%
Bootstrap support for Q5JI21 as seed ortholog is 100%.
Bootstrap support for A2FDP9 as seed ortholog is 100%.

Group of orthologs #64. Best score 212 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:83 T.vaginalis:212

Q5JDV2              	100.00%		A2F8L5              	100.00%
                    	       		A2FGP1              	26.45%
Bootstrap support for Q5JDV2 as seed ortholog is 95%.
Bootstrap support for A2F8L5 as seed ortholog is 100%.

Group of orthologs #65. Best score 211 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:211 T.vaginalis:13

Q5JFK3              	100.00%		A2FI53              	100.00%
Bootstrap support for Q5JFK3 as seed ortholog is 100%.
Bootstrap support for A2FI53 as seed ortholog is 61%.
Alternative seed ortholog is A2EAT3 (13 bits away from this cluster)

Group of orthologs #66. Best score 211 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:211 T.vaginalis:92

Q5JEP3              	100.00%		A2FUT1              	100.00%
Bootstrap support for Q5JEP3 as seed ortholog is 100%.
Bootstrap support for A2FUT1 as seed ortholog is 98%.

Group of orthologs #67. Best score 209 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:209 T.vaginalis:71

Q5JHP3              	100.00%		A2DYJ7              	100.00%
Bootstrap support for Q5JHP3 as seed ortholog is 100%.
Bootstrap support for A2DYJ7 as seed ortholog is 97%.

Group of orthologs #68. Best score 208 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:208 T.vaginalis:208

Q5JDJ5              	100.00%		A2DDJ3              	100.00%
Bootstrap support for Q5JDJ5 as seed ortholog is 100%.
Bootstrap support for A2DDJ3 as seed ortholog is 100%.

Group of orthologs #69. Best score 206 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:206 T.vaginalis:206

Q9HHC4              	100.00%		A2DFX6              	100.00%
Bootstrap support for Q9HHC4 as seed ortholog is 100%.
Bootstrap support for A2DFX6 as seed ortholog is 100%.

Group of orthologs #70. Best score 205 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:205 T.vaginalis:205

Q877I0              	100.00%		A2DYC4              	100.00%
                    	       		A2E0R0              	88.81%
Bootstrap support for Q877I0 as seed ortholog is 100%.
Bootstrap support for A2DYC4 as seed ortholog is 100%.

Group of orthologs #71. Best score 204 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:204 T.vaginalis:204

Q5JFN1              	100.00%		A2E9S9              	100.00%
                    	       		A2DXE8              	44.13%
Bootstrap support for Q5JFN1 as seed ortholog is 100%.
Bootstrap support for A2E9S9 as seed ortholog is 100%.

Group of orthologs #72. Best score 203 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:203 T.vaginalis:203

Q5JGK6              	100.00%		A2EPZ2              	100.00%
Bootstrap support for Q5JGK6 as seed ortholog is 100%.
Bootstrap support for A2EPZ2 as seed ortholog is 100%.

Group of orthologs #73. Best score 201 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:201 T.vaginalis:201

Q5JE24              	100.00%		A2DNF5              	100.00%
                    	       		A2FIZ8              	81.16%
                    	       		A2FIV5              	12.80%
Bootstrap support for Q5JE24 as seed ortholog is 100%.
Bootstrap support for A2DNF5 as seed ortholog is 100%.

Group of orthologs #74. Best score 200 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:200 T.vaginalis:200

Q5JGF4              	100.00%		A2DY82              	100.00%
Bootstrap support for Q5JGF4 as seed ortholog is 100%.
Bootstrap support for A2DY82 as seed ortholog is 100%.

Group of orthologs #75. Best score 199 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:199 T.vaginalis:199

Q5JJH1              	100.00%		A2DFU8              	100.00%
                    	       		A2FWH4              	100.00%
                    	       		A2ESE6              	99.61%
                    	       		A2DZB2              	99.47%
                    	       		A2DH65              	99.34%
Bootstrap support for Q5JJH1 as seed ortholog is 100%.
Bootstrap support for A2DFU8 as seed ortholog is 100%.
Bootstrap support for A2FWH4 as seed ortholog is 100%.

Group of orthologs #76. Best score 197 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:197 T.vaginalis:123

Q5JDV8              	100.00%		A2DQ43              	100.00%
Bootstrap support for Q5JDV8 as seed ortholog is 100%.
Bootstrap support for A2DQ43 as seed ortholog is 99%.

Group of orthologs #77. Best score 197 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:197 T.vaginalis:197

Q5JF74              	100.00%		A2EHQ0              	100.00%
Bootstrap support for Q5JF74 as seed ortholog is 100%.
Bootstrap support for A2EHQ0 as seed ortholog is 100%.

Group of orthologs #78. Best score 195 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:195 T.vaginalis:195

Q5JF06              	100.00%		A2EAE3              	100.00%
Bootstrap support for Q5JF06 as seed ortholog is 100%.
Bootstrap support for A2EAE3 as seed ortholog is 100%.

Group of orthologs #79. Best score 191 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:191 T.vaginalis:104

Q5JH96              	100.00%		A2E1B9              	100.00%
                    	       		A2FEA7              	20.87%
Bootstrap support for Q5JH96 as seed ortholog is 100%.
Bootstrap support for A2E1B9 as seed ortholog is 98%.

Group of orthologs #80. Best score 186 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:186 T.vaginalis:186

Q5JDI0              	100.00%		A2DAA4              	100.00%
                    	       		A2E1Z6              	99.26%
                    	       		A2E4D0              	98.70%
Bootstrap support for Q5JDI0 as seed ortholog is 100%.
Bootstrap support for A2DAA4 as seed ortholog is 100%.

Group of orthologs #81. Best score 183 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:93 T.vaginalis:31

Q5JDD8              	100.00%		A2D9M0              	100.00%
                    	       		A2FTU7              	30.37%
                    	       		A2F0N4              	6.28%
Bootstrap support for Q5JDD8 as seed ortholog is 99%.
Bootstrap support for A2D9M0 as seed ortholog is 80%.

Group of orthologs #82. Best score 182 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:182 T.vaginalis:182

Q5JIG7              	100.00%		A2DLF4              	100.00%
                    	       		A2F093              	97.84%
Bootstrap support for Q5JIG7 as seed ortholog is 100%.
Bootstrap support for A2DLF4 as seed ortholog is 100%.

Group of orthologs #83. Best score 182 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:182 T.vaginalis:182

Q5JH24              	100.00%		A2D958              	100.00%
Bootstrap support for Q5JH24 as seed ortholog is 100%.
Bootstrap support for A2D958 as seed ortholog is 100%.

Group of orthologs #84. Best score 178 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:178 T.vaginalis:60

Q5JE76              	100.00%		A2DHC0              	100.00%
                    	       		A2D8M7              	43.19%
                    	       		A2F3P9              	22.46%
                    	       		A2FMT2              	12.17%
                    	       		A2EK23              	6.09%
                    	       		A2E874              	5.07%
Bootstrap support for Q5JE76 as seed ortholog is 100%.
Bootstrap support for A2DHC0 as seed ortholog is 95%.

Group of orthologs #85. Best score 178 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:178 T.vaginalis:178

Q5JIM2              	100.00%		A2EJM3              	100.00%
Bootstrap support for Q5JIM2 as seed ortholog is 100%.
Bootstrap support for A2EJM3 as seed ortholog is 100%.

Group of orthologs #86. Best score 176 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:176 T.vaginalis:60

Q5JGT0              	100.00%		A2E0R2              	100.00%
Q5JIW7              	74.87%		A2ELU8              	69.99%
Bootstrap support for Q5JGT0 as seed ortholog is 100%.
Bootstrap support for A2E0R2 as seed ortholog is 89%.

Group of orthologs #87. Best score 176 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:37 T.vaginalis:176

Q5JI15              	100.00%		A2F7I7              	100.00%
Bootstrap support for Q5JI15 as seed ortholog is 86%.
Bootstrap support for A2F7I7 as seed ortholog is 100%.

Group of orthologs #88. Best score 176 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:176 T.vaginalis:2

Q5JIU9              	100.00%		A2FT79              	100.00%
Bootstrap support for Q5JIU9 as seed ortholog is 100%.
Bootstrap support for A2FT79 as seed ortholog is 50%.
Alternative seed ortholog is A2DTN3 (2 bits away from this cluster)

Group of orthologs #89. Best score 172 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:172 T.vaginalis:172

Q5JF63              	100.00%		A2FA72              	100.00%
Bootstrap support for Q5JF63 as seed ortholog is 100%.
Bootstrap support for A2FA72 as seed ortholog is 100%.

Group of orthologs #90. Best score 169 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:169 T.vaginalis:49

Q5JGV6              	100.00%		A2EUT9              	100.00%
                    	       		A2DUA0              	19.82%
                    	       		A2D9Y6              	17.09%
                    	       		A2EB56              	16.24%
                    	       		A2ER07              	13.32%
                    	       		A2DLF9              	8.64%
Bootstrap support for Q5JGV6 as seed ortholog is 100%.
Bootstrap support for A2EUT9 as seed ortholog is 81%.

Group of orthologs #91. Best score 169 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:169 T.vaginalis:32

Q5JER0              	100.00%		A2DIY8              	100.00%
Q5JHB4              	10.38%		A2EKZ9              	87.17%
Bootstrap support for Q5JER0 as seed ortholog is 100%.
Bootstrap support for A2DIY8 as seed ortholog is 78%.

Group of orthologs #92. Best score 169 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:169 T.vaginalis:169

Q5JCY1              	100.00%		A2DK37              	100.00%
                    	       		A2DQV1              	44.46%
Bootstrap support for Q5JCY1 as seed ortholog is 100%.
Bootstrap support for A2DK37 as seed ortholog is 100%.

Group of orthologs #93. Best score 166 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:166 T.vaginalis:166

Q5JJG8              	100.00%		A2DDJ7              	100.00%
                    	       		A2E8B4              	100.00%
                    	       		A2EHK3              	100.00%
                    	       		A2FV16              	100.00%
                    	       		A2FAK9              	90.45%
Bootstrap support for Q5JJG8 as seed ortholog is 100%.
Bootstrap support for A2DDJ7 as seed ortholog is 100%.
Bootstrap support for A2E8B4 as seed ortholog is 100%.
Bootstrap support for A2EHK3 as seed ortholog is 100%.
Bootstrap support for A2FV16 as seed ortholog is 100%.

Group of orthologs #94. Best score 166 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:166 T.vaginalis:166

Q5JGD1              	100.00%		A2F078              	100.00%
                    	       		A2E8I5              	33.87%
                    	       		A2DA39              	32.55%
                    	       		A2DKI5              	32.55%
Bootstrap support for Q5JGD1 as seed ortholog is 100%.
Bootstrap support for A2F078 as seed ortholog is 100%.

Group of orthologs #95. Best score 166 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:166 T.vaginalis:166

O59650              	100.00%		A2G1Y8              	100.00%
                    	       		A2D8B4              	96.75%
                    	       		A2DWI3              	96.21%
                    	       		A2FCY9              	95.66%
Bootstrap support for O59650 as seed ortholog is 100%.
Bootstrap support for A2G1Y8 as seed ortholog is 100%.

Group of orthologs #96. Best score 165 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:165 T.vaginalis:165

Q5JJF3              	100.00%		A2E264              	100.00%
                    	       		A2EJP5              	100.00%
                    	       		A2EVR5              	100.00%
                    	       		A2FWM0              	100.00%
                    	       		Q76KS8              	100.00%
Bootstrap support for Q5JJF3 as seed ortholog is 100%.
Bootstrap support for A2E264 as seed ortholog is 100%.
Bootstrap support for A2EJP5 as seed ortholog is 100%.
Bootstrap support for A2EVR5 as seed ortholog is 100%.
Bootstrap support for A2FWM0 as seed ortholog is 100%.
Bootstrap support for Q76KS8 as seed ortholog is 100%.

Group of orthologs #97. Best score 165 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:165 T.vaginalis:165

Q5JH43              	100.00%		A2DUS0              	100.00%
                    	       		A2ECR7              	98.47%
Bootstrap support for Q5JH43 as seed ortholog is 100%.
Bootstrap support for A2DUS0 as seed ortholog is 100%.

Group of orthologs #98. Best score 164 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:164 T.vaginalis:88

Q5JFN0              	100.00%		A2E6B9              	100.00%
                    	       		A2E0W9              	13.43%
Bootstrap support for Q5JFN0 as seed ortholog is 100%.
Bootstrap support for A2E6B9 as seed ortholog is 98%.

Group of orthologs #99. Best score 163 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:163 T.vaginalis:163

Q5JDF4              	100.00%		A2FSW9              	100.00%
                    	       		A2DSU9              	41.90%
                    	       		A2E1G4              	37.73%
                    	       		A2FJ70              	27.69%
                    	       		A2E3V9              	26.42%
                    	       		A2DY32              	25.88%
                    	       		A2FF20              	25.15%
                    	       		A2DIF5              	24.12%
                    	       		A2FJ90              	10.04%
                    	       		A2DYG8              	9.31%
Bootstrap support for Q5JDF4 as seed ortholog is 100%.
Bootstrap support for A2FSW9 as seed ortholog is 100%.

Group of orthologs #100. Best score 158 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:158 T.vaginalis:158

Q5JIB3              	100.00%		A2FQY9              	100.00%
                    	       		A2FDH4              	46.31%
Bootstrap support for Q5JIB3 as seed ortholog is 100%.
Bootstrap support for A2FQY9 as seed ortholog is 100%.

Group of orthologs #101. Best score 158 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:158 T.vaginalis:61

Q5JEM6              	100.00%		A2DP66              	100.00%
Bootstrap support for Q5JEM6 as seed ortholog is 100%.
Bootstrap support for A2DP66 as seed ortholog is 94%.

Group of orthologs #102. Best score 157 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:157 T.vaginalis:157

Q5JEZ9              	100.00%		A2FZA2              	100.00%
                    	       		A2EXR9              	64.38%
                    	       		A2FZ99              	48.46%
                    	       		A2GEK8              	39.77%
                    	       		A2DGJ2              	37.16%
                    	       		A2DZG5              	36.20%
                    	       		A2DEW5              	34.27%
                    	       		A2FIU8              	33.98%
                    	       		A2EII1              	33.78%
                    	       		A2DVE9              	32.92%
                    	       		A2D7Z2              	31.47%
                    	       		A2FBL3              	30.31%
                    	       		A2DL12              	30.21%
                    	       		A2F6E0              	25.58%
                    	       		A2DKG1              	25.10%
                    	       		A2G1G1              	20.75%
                    	       		A2FBV4              	19.59%
                    	       		A2GG94              	15.83%
                    	       		A2F318              	14.96%
                    	       		A2E808              	14.67%
                    	       		A2FZA1              	14.09%
                    	       		A2FZ98              	13.51%
                    	       		A2DXR7              	13.32%
                    	       		A2DKG0              	13.22%
                    	       		A2EJ73              	13.13%
                    	       		A2EXS0              	12.74%
                    	       		A2DZC8              	12.07%
                    	       		A2GEK7              	12.07%
                    	       		A2GDH3              	10.33%
                    	       		A2EB14              	10.23%
                    	       		A2EFV2              	8.98%
                    	       		A2G1W9              	7.43%
Bootstrap support for Q5JEZ9 as seed ortholog is 100%.
Bootstrap support for A2FZA2 as seed ortholog is 100%.

Group of orthologs #103. Best score 156 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:156 T.vaginalis:156

Q5JIA4              	100.00%		A2EIG0              	100.00%
Bootstrap support for Q5JIA4 as seed ortholog is 100%.
Bootstrap support for A2EIG0 as seed ortholog is 100%.

Group of orthologs #104. Best score 151 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:53 T.vaginalis:151

Q5JI97              	100.00%		A2EDD6              	100.00%
                    	       		A2DIH3              	53.86%
                    	       		A2G1C4              	18.49%
Bootstrap support for Q5JI97 as seed ortholog is 90%.
Bootstrap support for A2EDD6 as seed ortholog is 100%.

Group of orthologs #105. Best score 151 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:151 T.vaginalis:151

Q5JGH7              	100.00%		A2G8P4              	100.00%
Bootstrap support for Q5JGH7 as seed ortholog is 100%.
Bootstrap support for A2G8P4 as seed ortholog is 100%.

Group of orthologs #106. Best score 148 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:148 T.vaginalis:101

Q5JIH2              	100.00%		A2G6F4              	100.00%
                    	       		A2FNK5              	73.03%
                    	       		A2FW10              	68.29%
Bootstrap support for Q5JIH2 as seed ortholog is 100%.
Bootstrap support for A2G6F4 as seed ortholog is 99%.

Group of orthologs #107. Best score 148 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:148 T.vaginalis:148

Q5JI54              	100.00%		A2EVN6              	100.00%
Bootstrap support for Q5JI54 as seed ortholog is 100%.
Bootstrap support for A2EVN6 as seed ortholog is 100%.

Group of orthologs #108. Best score 147 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:147 T.vaginalis:147

Q5JHS7              	100.00%		A2FAB3              	100.00%
Bootstrap support for Q5JHS7 as seed ortholog is 100%.
Bootstrap support for A2FAB3 as seed ortholog is 100%.

Group of orthologs #109. Best score 146 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:146 T.vaginalis:146

Q5JHP2              	100.00%		A2E870              	100.00%
Bootstrap support for Q5JHP2 as seed ortholog is 100%.
Bootstrap support for A2E870 as seed ortholog is 100%.

Group of orthologs #110. Best score 145 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:145 T.vaginalis:145

Q5JIY3              	100.00%		A2F2T3              	100.00%
                    	       		A2F5T3              	90.42%
                    	       		A2G3K3              	88.32%
                    	       		A2DX41              	26.05%
Bootstrap support for Q5JIY3 as seed ortholog is 100%.
Bootstrap support for A2F2T3 as seed ortholog is 100%.

Group of orthologs #111. Best score 145 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:100 T.vaginalis:71

Q5JHM0              	100.00%		A2ETD5              	100.00%
Q5JJC2              	6.79%		
Bootstrap support for Q5JHM0 as seed ortholog is 99%.
Bootstrap support for A2ETD5 as seed ortholog is 97%.

Group of orthologs #112. Best score 144 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:100 T.vaginalis:77

Q5JIJ0              	100.00%		Q95WG9              	100.00%
                    	       		A2DHK3              	59.08%
Bootstrap support for Q5JIJ0 as seed ortholog is 99%.
Bootstrap support for Q95WG9 as seed ortholog is 96%.

Group of orthologs #113. Best score 143 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:143 T.vaginalis:43

Q5JJ45              	100.00%		A2FUN7              	100.00%
                    	       		A2GCR2              	11.24%
                    	       		A2DFS6              	6.97%
Bootstrap support for Q5JJ45 as seed ortholog is 100%.
Bootstrap support for A2FUN7 as seed ortholog is 91%.

Group of orthologs #114. Best score 143 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:2 T.vaginalis:39

Q5JJ05              	100.00%		A2DII1              	100.00%
Bootstrap support for Q5JJ05 as seed ortholog is 49%.
Alternative seed ortholog is Q5JIE4 (2 bits away from this cluster)
Bootstrap support for A2DII1 as seed ortholog is 83%.

Group of orthologs #115. Best score 142 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:79 T.vaginalis:95

Q5JE21              	100.00%		A2FY82              	100.00%
                    	       		A2DJA3              	69.84%
                    	       		A2GAH8              	69.60%
                    	       		A2E7I0              	52.58%
                    	       		A2E3X7              	48.47%
                    	       		A2EMD3              	48.47%
Bootstrap support for Q5JE21 as seed ortholog is 94%.
Bootstrap support for A2FY82 as seed ortholog is 97%.

Group of orthologs #116. Best score 142 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:142 T.vaginalis:142

Q5JJD2              	100.00%		A2DNB0              	100.00%
                    	       		A2EFE7              	100.00%
                    	       		A2FCK1              	100.00%
                    	       		A2FLG0              	100.00%
Bootstrap support for Q5JJD2 as seed ortholog is 100%.
Bootstrap support for A2DNB0 as seed ortholog is 100%.
Bootstrap support for A2EFE7 as seed ortholog is 100%.
Bootstrap support for A2FCK1 as seed ortholog is 100%.
Bootstrap support for A2FLG0 as seed ortholog is 100%.

Group of orthologs #117. Best score 142 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:142 T.vaginalis:142

Q5JEX8              	100.00%		A2F859              	100.00%
Bootstrap support for Q5JEX8 as seed ortholog is 100%.
Bootstrap support for A2F859 as seed ortholog is 100%.

Group of orthologs #118. Best score 141 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:141 T.vaginalis:141

Q5JFH7              	100.00%		A2F811              	100.00%
Q5JEW2              	30.72%		
Q5JIA8              	30.45%		
Q5JEN7              	29.65%		
Q5JEY6              	29.65%		
Bootstrap support for Q5JFH7 as seed ortholog is 100%.
Bootstrap support for A2F811 as seed ortholog is 100%.

Group of orthologs #119. Best score 141 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:141 T.vaginalis:141

Q5JEX7              	100.00%		A2DZD8              	100.00%
Bootstrap support for Q5JEX7 as seed ortholog is 100%.
Bootstrap support for A2DZD8 as seed ortholog is 100%.

Group of orthologs #120. Best score 139 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:63 T.vaginalis:72

Q5JHU0              	100.00%		A2EIU6              	100.00%
Q5JF51              	32.10%		A2EI95              	90.24%
Bootstrap support for Q5JHU0 as seed ortholog is 94%.
Bootstrap support for A2EIU6 as seed ortholog is 95%.

Group of orthologs #121. Best score 139 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:139 T.vaginalis:139

Q5JE20              	100.00%		A2D895              	100.00%
Bootstrap support for Q5JE20 as seed ortholog is 100%.
Bootstrap support for A2D895 as seed ortholog is 100%.

Group of orthologs #122. Best score 139 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:139 T.vaginalis:139

Q5JDZ7              	100.00%		A2DQL6              	100.00%
Bootstrap support for Q5JDZ7 as seed ortholog is 100%.
Bootstrap support for A2DQL6 as seed ortholog is 100%.

Group of orthologs #123. Best score 138 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:138 T.vaginalis:138

Q5JHP1              	100.00%		A2G4Z2              	100.00%
                    	       		A2DH92              	10.15%
                    	       		A2E9V5              	10.09%
Bootstrap support for Q5JHP1 as seed ortholog is 100%.
Bootstrap support for A2G4Z2 as seed ortholog is 100%.

Group of orthologs #124. Best score 137 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:137 T.vaginalis:137

Q5JJG0              	100.00%		A2DBB7              	100.00%
                    	       		A2ECC6              	100.00%
                    	       		A2FC75              	100.00%
Bootstrap support for Q5JJG0 as seed ortholog is 100%.
Bootstrap support for A2DBB7 as seed ortholog is 100%.
Bootstrap support for A2ECC6 as seed ortholog is 100%.
Bootstrap support for A2FC75 as seed ortholog is 100%.

Group of orthologs #125. Best score 137 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:137 T.vaginalis:137

Q5JG59              	100.00%		A2FBP0              	100.00%
Bootstrap support for Q5JG59 as seed ortholog is 100%.
Bootstrap support for A2FBP0 as seed ortholog is 100%.

Group of orthologs #126. Best score 136 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:136 T.vaginalis:136

Q5JHT1              	100.00%		A2E938              	100.00%
Bootstrap support for Q5JHT1 as seed ortholog is 100%.
Bootstrap support for A2E938 as seed ortholog is 100%.

Group of orthologs #127. Best score 134 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:134 T.vaginalis:134

Q5JE04              	100.00%		A2DFZ5              	100.00%
                    	       		A2E4S6              	96.84%
                    	       		A2FPT8              	96.44%
Bootstrap support for Q5JE04 as seed ortholog is 100%.
Bootstrap support for A2DFZ5 as seed ortholog is 100%.

Group of orthologs #128. Best score 134 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:134 T.vaginalis:134

Q5JGE1              	100.00%		A2EKJ5              	100.00%
Bootstrap support for Q5JGE1 as seed ortholog is 100%.
Bootstrap support for A2EKJ5 as seed ortholog is 100%.

Group of orthologs #129. Best score 133 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 T.vaginalis:53

Q5JDD3              	100.00%		A2DZX8              	100.00%
Q5JCX0              	17.54%		A2FSI1              	46.12%
Q5JGV1              	14.11%		A2FIZ1              	38.79%
Q5JIN8              	13.31%		A2EUC5              	38.08%
Q5JIB0              	12.10%		A2F5D5              	37.66%
Q5JDQ2              	11.90%		A2FTE1              	37.24%
Q5JG38              	11.49%		A2DUV5              	36.95%
                    	       		A2FB01              	35.40%
                    	       		A2GKT4              	29.06%
                    	       		A2F8U5              	24.26%
                    	       		A2DVC3              	21.30%
                    	       		A2FU48              	20.87%
                    	       		A2FNL8              	13.12%
                    	       		A2GU30              	11.85%
Bootstrap support for Q5JDD3 as seed ortholog is 95%.
Bootstrap support for A2DZX8 as seed ortholog is 96%.

Group of orthologs #130. Best score 133 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:133 T.vaginalis:24

Q5JHR7              	100.00%		A2EWL7              	100.00%
                    	       		A2EKA7              	93.91%
                    	       		A2FQA9              	38.94%
Bootstrap support for Q5JHR7 as seed ortholog is 100%.
Bootstrap support for A2EWL7 as seed ortholog is 64%.
Alternative seed ortholog is A2E0R3 (24 bits away from this cluster)

Group of orthologs #131. Best score 133 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:133 T.vaginalis:80

Q5JI98              	100.00%		A2E4U5              	100.00%
                    	       		A2F2J3              	72.96%
Bootstrap support for Q5JI98 as seed ortholog is 100%.
Bootstrap support for A2E4U5 as seed ortholog is 99%.

Group of orthologs #132. Best score 132 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:132 T.vaginalis:132

Q5JH18              	100.00%		A2G9E0              	100.00%
                    	       		A2DSX4              	75.34%
Bootstrap support for Q5JH18 as seed ortholog is 100%.
Bootstrap support for A2G9E0 as seed ortholog is 100%.

Group of orthologs #133. Best score 132 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:132 T.vaginalis:33

Q5JI09              	100.00%		A2G4I3              	100.00%
Bootstrap support for Q5JI09 as seed ortholog is 100%.
Bootstrap support for A2G4I3 as seed ortholog is 91%.

Group of orthologs #134. Best score 129 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:129 T.vaginalis:43

Q5JH68              	100.00%		A2FQ69              	100.00%
                    	       		A2FYU1              	100.00%
Bootstrap support for Q5JH68 as seed ortholog is 100%.
Bootstrap support for A2FQ69 as seed ortholog is 90%.
Bootstrap support for A2FYU1 as seed ortholog is 91%.

Group of orthologs #135. Best score 129 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:129 T.vaginalis:129

Q5JIT6              	100.00%		A2DHS6              	100.00%
Bootstrap support for Q5JIT6 as seed ortholog is 100%.
Bootstrap support for A2DHS6 as seed ortholog is 100%.

Group of orthologs #136. Best score 128 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:128 T.vaginalis:128

Q5JHF7              	100.00%		A2ELU0              	100.00%
Q5JE68              	35.61%		A2FNS0              	6.30%
Bootstrap support for Q5JHF7 as seed ortholog is 100%.
Bootstrap support for A2ELU0 as seed ortholog is 100%.

Group of orthologs #137. Best score 127 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:127 T.vaginalis:127

Q5JE78              	100.00%		A2G1C0              	100.00%
                    	       		A2DUR7              	68.80%
                    	       		A2ETN2              	34.64%
Bootstrap support for Q5JE78 as seed ortholog is 100%.
Bootstrap support for A2G1C0 as seed ortholog is 100%.

Group of orthologs #138. Best score 126 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:126 T.vaginalis:126

Q5JGJ4              	100.00%		A2F127              	100.00%
                    	       		A2E469              	97.78%
                    	       		A2D9L2              	96.67%
                    	       		A2E8S6              	96.11%
Bootstrap support for Q5JGJ4 as seed ortholog is 100%.
Bootstrap support for A2F127 as seed ortholog is 100%.

Group of orthologs #139. Best score 125 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:37 T.vaginalis:50

Q5JIG9              	100.00%		A2DNW8              	100.00%
Q5JG70              	18.83%		A2DNW6              	71.19%
Q5JFR9              	10.73%		A2F5R9              	54.32%
Q5JDA7              	6.78%		A2F5D6              	43.90%
                    	       		A2DUV6              	39.64%
                    	       		A2E762              	25.93%
                    	       		A2ERI5              	25.65%
                    	       		A2FPE3              	17.83%
                    	       		A2DJ85              	13.03%
Bootstrap support for Q5JIG9 as seed ortholog is 90%.
Bootstrap support for A2DNW8 as seed ortholog is 96%.

Group of orthologs #140. Best score 125 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:125 T.vaginalis:125

Q5JEK8              	100.00%		A2EA56              	100.00%
                    	       		A2F5V1              	89.72%
                    	       		A2EFL5              	86.14%
                    	       		A2ENA7              	72.13%
Bootstrap support for Q5JEK8 as seed ortholog is 100%.
Bootstrap support for A2EA56 as seed ortholog is 100%.

Group of orthologs #141. Best score 125 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:125 T.vaginalis:125

Q5JIF4              	100.00%		A2FSX7              	100.00%
                    	       		A2F2I8              	60.59%
Bootstrap support for Q5JIF4 as seed ortholog is 100%.
Bootstrap support for A2FSX7 as seed ortholog is 100%.

Group of orthologs #142. Best score 125 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:125 T.vaginalis:125

Q5JJG6              	100.00%		A2D8G1              	100.00%
Bootstrap support for Q5JJG6 as seed ortholog is 100%.
Bootstrap support for A2D8G1 as seed ortholog is 100%.

Group of orthologs #143. Best score 124 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:124 T.vaginalis:124

Q5JIZ7              	100.00%		A2DFV0              	100.00%
                    	       		A2GMG5              	94.16%
                    	       		A2EI82              	93.94%
                    	       		A2EUZ5              	92.21%
                    	       		A2EQY3              	90.48%
                    	       		A2E119              	89.61%
                    	       		A2FS17              	48.92%
                    	       		A2FS16              	38.10%
Bootstrap support for Q5JIZ7 as seed ortholog is 100%.
Bootstrap support for A2DFV0 as seed ortholog is 100%.

Group of orthologs #144. Best score 124 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:124 T.vaginalis:43

Q5JEX2              	100.00%		A2E5G6              	100.00%
                    	       		A2EP77              	98.17%
Bootstrap support for Q5JEX2 as seed ortholog is 100%.
Bootstrap support for A2E5G6 as seed ortholog is 92%.

Group of orthologs #145. Best score 124 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:124 T.vaginalis:124

Q5JJG1              	100.00%		A2EA92              	100.00%
                    	       		A2E7L8              	96.85%
Bootstrap support for Q5JJG1 as seed ortholog is 100%.
Bootstrap support for A2EA92 as seed ortholog is 100%.

Group of orthologs #146. Best score 123 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:123 T.vaginalis:123

Q5JJF1              	100.00%		A2E0E1              	100.00%
                    	       		A2DTR8              	99.47%
Bootstrap support for Q5JJF1 as seed ortholog is 100%.
Bootstrap support for A2E0E1 as seed ortholog is 100%.

Group of orthologs #147. Best score 122 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:122 T.vaginalis:58

Q5JHJ6              	100.00%		A2F8P6              	100.00%
                    	       		A2G725              	49.58%
                    	       		A2FE71              	39.35%
                    	       		A2EB51              	14.56%
                    	       		A2FSI2              	14.03%
                    	       		A2DIH4              	10.55%
Bootstrap support for Q5JHJ6 as seed ortholog is 100%.
Bootstrap support for A2F8P6 as seed ortholog is 98%.

Group of orthologs #148. Best score 120 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:120 T.vaginalis:35

Q5JJC1              	100.00%		A2EU62              	100.00%
                    	       		A2E7Y6              	68.27%
Bootstrap support for Q5JJC1 as seed ortholog is 100%.
Bootstrap support for A2EU62 as seed ortholog is 85%.

Group of orthologs #149. Best score 119 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:119 T.vaginalis:119

Q5JDP7              	100.00%		A2DMU5              	100.00%
Bootstrap support for Q5JDP7 as seed ortholog is 100%.
Bootstrap support for A2DMU5 as seed ortholog is 100%.

Group of orthologs #150. Best score 119 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:119 T.vaginalis:119

Q5JJF8              	100.00%		A2DP51              	100.00%
Bootstrap support for Q5JJF8 as seed ortholog is 100%.
Bootstrap support for A2DP51 as seed ortholog is 100%.

Group of orthologs #151. Best score 118 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:57 T.vaginalis:118

Q5JF30              	100.00%		Q6UJG4              	100.00%
                    	       		Q8IEV2              	96.95%
                    	       		A2ESJ9              	87.80%
                    	       		A2GAU8              	80.68%
                    	       		A2DXW7              	80.00%
                    	       		A2G9K3              	72.54%
                    	       		A2FEE9              	63.39%
                    	       		A2EFN5              	25.76%
Bootstrap support for Q5JF30 as seed ortholog is 98%.
Bootstrap support for Q6UJG4 as seed ortholog is 100%.

Group of orthologs #152. Best score 118 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:118 T.vaginalis:118

Q5JF27              	100.00%		A2GCQ3              	100.00%
Q5JFZ0              	11.54%		A2EI16              	44.24%
                    	       		A2F5V7              	42.67%
                    	       		A2E4P3              	41.49%
Bootstrap support for Q5JF27 as seed ortholog is 100%.
Bootstrap support for A2GCQ3 as seed ortholog is 100%.

Group of orthologs #153. Best score 118 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:118 T.vaginalis:4

Q5JIB6              	100.00%		A2ERR1              	100.00%
Q5JH42              	20.00%		A2DDA5              	23.04%
Bootstrap support for Q5JIB6 as seed ortholog is 100%.
Bootstrap support for A2ERR1 as seed ortholog is 52%.
Alternative seed ortholog is A2EWP7 (4 bits away from this cluster)

Group of orthologs #154. Best score 118 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:118 T.vaginalis:118

Q5JJG3              	100.00%		A2E211              	100.00%
                    	       		A2DLW4              	94.33%
Bootstrap support for Q5JJG3 as seed ortholog is 100%.
Bootstrap support for A2E211 as seed ortholog is 100%.

Group of orthologs #155. Best score 118 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:118 T.vaginalis:118

Q5JDB6              	100.00%		A2FUM2              	100.00%
                    	       		A2EJH2              	32.37%
Bootstrap support for Q5JDB6 as seed ortholog is 100%.
Bootstrap support for A2FUM2 as seed ortholog is 100%.

Group of orthologs #156. Best score 118 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:118 T.vaginalis:118

Q5JH79              	100.00%		A2DEN7              	100.00%
Bootstrap support for Q5JH79 as seed ortholog is 100%.
Bootstrap support for A2DEN7 as seed ortholog is 100%.

Group of orthologs #157. Best score 118 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:118 T.vaginalis:118

Q5JFV8              	100.00%		A2DQ35              	100.00%
Bootstrap support for Q5JFV8 as seed ortholog is 100%.
Bootstrap support for A2DQ35 as seed ortholog is 100%.

Group of orthologs #158. Best score 118 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:118 T.vaginalis:118

Q5JJC6              	100.00%		A2E1U7              	100.00%
Bootstrap support for Q5JJC6 as seed ortholog is 100%.
Bootstrap support for A2E1U7 as seed ortholog is 100%.

Group of orthologs #159. Best score 118 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:118 T.vaginalis:118

Q5JD73              	100.00%		A2EEP6              	100.00%
Bootstrap support for Q5JD73 as seed ortholog is 100%.
Bootstrap support for A2EEP6 as seed ortholog is 100%.

Group of orthologs #160. Best score 117 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:117 T.vaginalis:117

Q5JDH5              	100.00%		A2DIM3              	100.00%
Bootstrap support for Q5JDH5 as seed ortholog is 100%.
Bootstrap support for A2DIM3 as seed ortholog is 100%.

Group of orthologs #161. Best score 116 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:23 T.vaginalis:29

Q5JFJ1              	100.00%		A2GNF3              	100.00%
Q5JF59              	39.22%		A2FXZ5              	75.61%
Q5JJ54              	27.51%		A2F8U6              	67.19%
Q5JEB0              	24.91%		A2EN45              	57.54%
Q5JG78              	17.66%		A2FTE0              	41.75%
Bootstrap support for Q5JFJ1 as seed ortholog is 79%.
Bootstrap support for A2GNF3 as seed ortholog is 83%.

Group of orthologs #162. Best score 116 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:116 T.vaginalis:116

Q5JHZ0              	100.00%		Q6XKE2              	100.00%
Bootstrap support for Q5JHZ0 as seed ortholog is 100%.
Bootstrap support for Q6XKE2 as seed ortholog is 100%.

Group of orthologs #163. Best score 114 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:114 T.vaginalis:60

Q5JJF2              	100.00%		A2EQ46              	100.00%
                    	       		A2DNY3              	99.21%
                    	       		A2EWU2              	98.81%
                    	       		A2F6E3              	98.02%
                    	       		A2GB88              	98.02%
Bootstrap support for Q5JJF2 as seed ortholog is 100%.
Bootstrap support for A2EQ46 as seed ortholog is 99%.

Group of orthologs #164. Best score 114 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:114 T.vaginalis:114

Q5JD70              	100.00%		A2E5K9              	100.00%
Q5JHN7              	7.20%		
Q5JEI4              	5.35%		
Bootstrap support for Q5JD70 as seed ortholog is 100%.
Bootstrap support for A2E5K9 as seed ortholog is 100%.

Group of orthologs #165. Best score 113 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:113 T.vaginalis:113

Q5JDI6              	100.00%		A2FVZ6              	100.00%
                    	       		A2E3X8              	97.50%
                    	       		A2DFF0              	96.25%
                    	       		A2F3X9              	96.25%
                    	       		A2F421              	87.81%
Bootstrap support for Q5JDI6 as seed ortholog is 100%.
Bootstrap support for A2FVZ6 as seed ortholog is 100%.

Group of orthologs #166. Best score 113 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:113 T.vaginalis:113

Q5JFM7              	100.00%		A2DCU6              	100.00%
Bootstrap support for Q5JFM7 as seed ortholog is 100%.
Bootstrap support for A2DCU6 as seed ortholog is 100%.

Group of orthologs #167. Best score 112 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:112 T.vaginalis:112

Q5JIZ5              	100.00%		A2E7K1              	100.00%
                    	       		A2E584              	19.31%
                    	       		A2F5H0              	12.62%
                    	       		A2EDZ8              	11.68%
                    	       		A2DAQ7              	8.34%
                    	       		A2DAQ6              	7.24%
                    	       		A2EEV4              	6.69%
                    	       		A2GCL5              	6.25%
Bootstrap support for Q5JIZ5 as seed ortholog is 100%.
Bootstrap support for A2E7K1 as seed ortholog is 100%.

Group of orthologs #168. Best score 112 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:112 T.vaginalis:112

Q5JF32              	100.00%		A2F7D4              	100.00%
Q5JFD3              	42.66%		A2DQV2              	11.81%
Bootstrap support for Q5JF32 as seed ortholog is 100%.
Bootstrap support for A2F7D4 as seed ortholog is 100%.

Group of orthologs #169. Best score 111 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:111 T.vaginalis:111

Q5JDH3              	100.00%		A2DVD8              	100.00%
Bootstrap support for Q5JDH3 as seed ortholog is 100%.
Bootstrap support for A2DVD8 as seed ortholog is 100%.

Group of orthologs #170. Best score 111 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:60 T.vaginalis:111

Q5JEU9              	100.00%		A2FF61              	100.00%
Bootstrap support for Q5JEU9 as seed ortholog is 96%.
Bootstrap support for A2FF61 as seed ortholog is 100%.

Group of orthologs #171. Best score 110 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:110 T.vaginalis:29

Q5JGI1              	100.00%		A2FAS2              	100.00%
Bootstrap support for Q5JGI1 as seed ortholog is 100%.
Bootstrap support for A2FAS2 as seed ortholog is 73%.
Alternative seed ortholog is A2F106 (29 bits away from this cluster)

Group of orthologs #172. Best score 109 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:6 T.vaginalis:109

Q5JJ24              	100.00%		A2DZE8              	100.00%
                    	       		A2DSR8              	81.55%
                    	       		A2E3C6              	62.92%
                    	       		A2ELE6              	54.24%
                    	       		A2EK20              	46.86%
Bootstrap support for Q5JJ24 as seed ortholog is 45%.
Alternative seed ortholog is Q5JCY5 (6 bits away from this cluster)
Bootstrap support for A2DZE8 as seed ortholog is 100%.

Group of orthologs #173. Best score 109 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:109 T.vaginalis:109

Q5JH28              	100.00%		A2DNX2              	100.00%
Bootstrap support for Q5JH28 as seed ortholog is 100%.
Bootstrap support for A2DNX2 as seed ortholog is 100%.

Group of orthologs #174. Best score 109 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:4 T.vaginalis:109

Q5JFY9              	100.00%		A2EM36              	100.00%
Bootstrap support for Q5JFY9 as seed ortholog is 53%.
Alternative seed ortholog is Q5JJ48 (4 bits away from this cluster)
Bootstrap support for A2EM36 as seed ortholog is 100%.

Group of orthologs #175. Best score 109 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:109 T.vaginalis:109

Q5JGT4              	100.00%		A2ET54              	100.00%
Bootstrap support for Q5JGT4 as seed ortholog is 100%.
Bootstrap support for A2ET54 as seed ortholog is 100%.

Group of orthologs #176. Best score 108 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:108 T.vaginalis:108

Q5JI34              	100.00%		A2EDH3              	100.00%
                    	       		A2FMI5              	68.36%
Bootstrap support for Q5JI34 as seed ortholog is 100%.
Bootstrap support for A2EDH3 as seed ortholog is 100%.

Group of orthologs #177. Best score 108 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:108 T.vaginalis:108

Q5JD58              	100.00%		A2DE84              	100.00%
Bootstrap support for Q5JD58 as seed ortholog is 100%.
Bootstrap support for A2DE84 as seed ortholog is 100%.

Group of orthologs #178. Best score 108 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:108 T.vaginalis:39

Q5JIB9              	100.00%		A2DEQ3              	100.00%
Bootstrap support for Q5JIB9 as seed ortholog is 100%.
Bootstrap support for A2DEQ3 as seed ortholog is 87%.

Group of orthologs #179. Best score 108 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:108 T.vaginalis:108

Q5JJF4              	100.00%		A2F4R6              	100.00%
Bootstrap support for Q5JJF4 as seed ortholog is 100%.
Bootstrap support for A2F4R6 as seed ortholog is 100%.

Group of orthologs #180. Best score 107 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:107 T.vaginalis:107

Q5JE74              	100.00%		A2DS55              	100.00%
                    	       		A2DNH5              	62.37%
Bootstrap support for Q5JE74 as seed ortholog is 100%.
Bootstrap support for A2DS55 as seed ortholog is 100%.

Group of orthologs #181. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 T.vaginalis:106

Q5JJC3              	100.00%		A2DDC6              	100.00%
                    	       		A2DWN3              	30.41%
                    	       		A2FL46              	16.53%
Bootstrap support for Q5JJC3 as seed ortholog is 100%.
Bootstrap support for A2DDC6 as seed ortholog is 100%.

Group of orthologs #182. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 T.vaginalis:106

Q5JJG7              	100.00%		A2DNM5              	100.00%
                    	       		A2DPX6              	100.00%
                    	       		A2FL91              	99.40%
Bootstrap support for Q5JJG7 as seed ortholog is 100%.
Bootstrap support for A2DNM5 as seed ortholog is 100%.
Bootstrap support for A2DPX6 as seed ortholog is 100%.

Group of orthologs #183. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 T.vaginalis:106

Q5JI50              	100.00%		A2DP52              	100.00%
Bootstrap support for Q5JI50 as seed ortholog is 100%.
Bootstrap support for A2DP52 as seed ortholog is 100%.

Group of orthologs #184. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 T.vaginalis:106

Q5JIR1              	100.00%		A2DY20              	100.00%
Bootstrap support for Q5JIR1 as seed ortholog is 100%.
Bootstrap support for A2DY20 as seed ortholog is 100%.

Group of orthologs #185. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 T.vaginalis:106

Q5JEB7              	100.00%		A2EW86              	100.00%
Bootstrap support for Q5JEB7 as seed ortholog is 100%.
Bootstrap support for A2EW86 as seed ortholog is 100%.

Group of orthologs #186. Best score 104 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:104 T.vaginalis:36

Q5JH36              	100.00%		A2EES5              	100.00%
                    	       		A2FVM1              	98.85%
                    	       		A2DHM5              	71.76%
                    	       		A2E744              	60.50%
                    	       		A2EQM0              	58.59%
                    	       		A2E2B6              	25.95%
Bootstrap support for Q5JH36 as seed ortholog is 100%.
Bootstrap support for A2EES5 as seed ortholog is 79%.

Group of orthologs #187. Best score 103 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:103 T.vaginalis:14

Q5JG47              	100.00%		A2DP91              	100.00%
                    	       		A2DZ01              	30.18%
Bootstrap support for Q5JG47 as seed ortholog is 100%.
Bootstrap support for A2DP91 as seed ortholog is 66%.
Alternative seed ortholog is A2F8E1 (14 bits away from this cluster)

Group of orthologs #188. Best score 103 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:103 T.vaginalis:103

Q5JGC2              	100.00%		A2G0I0              	100.00%
                    	       		A2H0N5              	25.50%
Bootstrap support for Q5JGC2 as seed ortholog is 100%.
Bootstrap support for A2G0I0 as seed ortholog is 100%.

Group of orthologs #189. Best score 102 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:102 T.vaginalis:102

Q5JJ59              	100.00%		A2G1R7              	100.00%
Q5JID9              	7.74%		A2DS34              	61.39%
                    	       		A2EKB4              	59.00%
                    	       		A2G0M2              	58.46%
                    	       		A2DS33              	48.59%
Bootstrap support for Q5JJ59 as seed ortholog is 100%.
Bootstrap support for A2G1R7 as seed ortholog is 100%.

Group of orthologs #190. Best score 102 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:102 T.vaginalis:102

Q5JGN5              	100.00%		A2EN51              	100.00%
                    	       		A2F2M0              	77.50%
                    	       		A2DDV9              	76.50%
                    	       		A2EG54              	75.50%
Bootstrap support for Q5JGN5 as seed ortholog is 100%.
Bootstrap support for A2EN51 as seed ortholog is 100%.

Group of orthologs #191. Best score 102 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:102 T.vaginalis:102

Q5JEW5              	100.00%		A2EED9              	100.00%
                    	       		A2EKA5              	31.64%
Bootstrap support for Q5JEW5 as seed ortholog is 100%.
Bootstrap support for A2EED9 as seed ortholog is 100%.

Group of orthologs #192. Best score 102 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:102 T.vaginalis:102

Q5JGC8              	100.00%		A2F347              	100.00%
Bootstrap support for Q5JGC8 as seed ortholog is 100%.
Bootstrap support for A2F347 as seed ortholog is 100%.

Group of orthologs #193. Best score 101 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:101 T.vaginalis:101

Q5JJE2              	100.00%		A2D919              	100.00%
                    	       		A2DIE4              	98.32%
Bootstrap support for Q5JJE2 as seed ortholog is 100%.
Bootstrap support for A2D919 as seed ortholog is 100%.

Group of orthologs #194. Best score 101 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:101 T.vaginalis:101

O74035              	100.00%		A2DUE3              	100.00%
Bootstrap support for O74035 as seed ortholog is 100%.
Bootstrap support for A2DUE3 as seed ortholog is 100%.

Group of orthologs #195. Best score 100 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:100 T.vaginalis:100

Q5JJF6              	100.00%		A2D7V7              	100.00%
                    	       		A2DS53              	100.00%
                    	       		A2EA49              	100.00%
                    	       		A2FVM3              	100.00%
                    	       		A2DGT9              	97.99%
                    	       		A2DZ26              	88.26%
                    	       		A2DSP8              	84.23%
Bootstrap support for Q5JJF6 as seed ortholog is 100%.
Bootstrap support for A2D7V7 as seed ortholog is 100%.
Bootstrap support for A2DS53 as seed ortholog is 100%.
Bootstrap support for A2EA49 as seed ortholog is 100%.
Bootstrap support for A2FVM3 as seed ortholog is 100%.

Group of orthologs #196. Best score 100 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:100 T.vaginalis:51

Q5JEZ6              	100.00%		A2ETZ0              	100.00%
                    	       		A2FVM4              	100.00%
Bootstrap support for Q5JEZ6 as seed ortholog is 100%.
Bootstrap support for A2ETZ0 as seed ortholog is 94%.
Bootstrap support for A2FVM4 as seed ortholog is 93%.

Group of orthologs #197. Best score 100 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:100 T.vaginalis:26

Q5JI92              	100.00%		A2EY58              	100.00%
Bootstrap support for Q5JI92 as seed ortholog is 100%.
Bootstrap support for A2EY58 as seed ortholog is 76%.

Group of orthologs #198. Best score 100 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:100 T.vaginalis:100

Q5JJ91              	100.00%		A2FTP3              	100.00%
Bootstrap support for Q5JJ91 as seed ortholog is 100%.
Bootstrap support for A2FTP3 as seed ortholog is 100%.

Group of orthologs #199. Best score 100 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:100 T.vaginalis:100

Q5JIQ1              	100.00%		Q5S7S9              	100.00%
Bootstrap support for Q5JIQ1 as seed ortholog is 100%.
Bootstrap support for Q5S7S9 as seed ortholog is 100%.

Group of orthologs #200. Best score 99 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:99 T.vaginalis:31

Q5JI40              	100.00%		A2DQH1              	100.00%
                    	       		A2DFU1              	66.16%
                    	       		A2FRL3              	41.46%
Bootstrap support for Q5JI40 as seed ortholog is 100%.
Bootstrap support for A2DQH1 as seed ortholog is 77%.

Group of orthologs #201. Best score 99 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:99 T.vaginalis:99

Q5JFW3              	100.00%		A2GPY4              	100.00%
Q5JEW1              	15.14%		
Q5JGG6              	11.59%		
Bootstrap support for Q5JFW3 as seed ortholog is 100%.
Bootstrap support for A2GPY4 as seed ortholog is 100%.

Group of orthologs #202. Best score 99 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:99 T.vaginalis:99

Q52366              	100.00%		A2DQT7              	100.00%
                    	       		A2G4N7              	100.00%
Bootstrap support for Q52366 as seed ortholog is 100%.
Bootstrap support for A2DQT7 as seed ortholog is 100%.
Bootstrap support for A2G4N7 as seed ortholog is 100%.

Group of orthologs #203. Best score 99 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:99 T.vaginalis:13

Q5JDJ9              	100.00%		A2E7Z2              	100.00%
Bootstrap support for Q5JDJ9 as seed ortholog is 100%.
Bootstrap support for A2E7Z2 as seed ortholog is 69%.
Alternative seed ortholog is A2F8W4 (13 bits away from this cluster)

Group of orthologs #204. Best score 98 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:98 T.vaginalis:26

Q5JIV0              	100.00%		A2ES02              	100.00%
Bootstrap support for Q5JIV0 as seed ortholog is 100%.
Bootstrap support for A2ES02 as seed ortholog is 86%.

Group of orthologs #205. Best score 96 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:96 T.vaginalis:17

Q5JHL8              	100.00%		A2F716              	100.00%
Bootstrap support for Q5JHL8 as seed ortholog is 100%.
Bootstrap support for A2F716 as seed ortholog is 73%.
Alternative seed ortholog is A2GAM9 (17 bits away from this cluster)

Group of orthologs #206. Best score 94 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:94 T.vaginalis:94

Q5JFZ8              	100.00%		A2DBA4              	100.00%
Q5JGP4              	20.82%		A2F0F6              	87.46%
Q5JJB9              	15.25%		
Q5JHY2              	12.60%		
Bootstrap support for Q5JFZ8 as seed ortholog is 100%.
Bootstrap support for A2DBA4 as seed ortholog is 100%.

Group of orthologs #207. Best score 94 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:94 T.vaginalis:94

Q5JI69              	100.00%		A2F0T6              	100.00%
                    	       		A2EU60              	97.92%
                    	       		A2DJ40              	81.10%
Bootstrap support for Q5JI69 as seed ortholog is 100%.
Bootstrap support for A2F0T6 as seed ortholog is 100%.

Group of orthologs #208. Best score 94 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:94 T.vaginalis:94

Q5JG53              	100.00%		A2FC71              	100.00%
                    	       		A2FP34              	5.97%
Bootstrap support for Q5JG53 as seed ortholog is 100%.
Bootstrap support for A2FC71 as seed ortholog is 100%.

Group of orthologs #209. Best score 92 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:92 T.vaginalis:92

Q5JFW5              	100.00%		A2DTK2              	100.00%
                    	       		A2EU21              	97.44%
Bootstrap support for Q5JFW5 as seed ortholog is 100%.
Bootstrap support for A2DTK2 as seed ortholog is 100%.

Group of orthologs #210. Best score 92 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:92 T.vaginalis:28

Q5JIA1              	100.00%		A2D842              	100.00%
Bootstrap support for Q5JIA1 as seed ortholog is 100%.
Bootstrap support for A2D842 as seed ortholog is 84%.

Group of orthologs #211. Best score 91 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:91 T.vaginalis:91

Q5JFI2              	100.00%		A2E273              	100.00%
                    	       		A2D8N0              	57.09%
                    	       		A2D935              	53.88%
                    	       		A2FCD5              	52.14%
                    	       		A2DE79              	50.53%
                    	       		A2DYU2              	48.40%
                    	       		A2FDZ0              	48.13%
                    	       		A2DIM8              	47.73%
                    	       		A2ERJ2              	47.06%
Bootstrap support for Q5JFI2 as seed ortholog is 100%.
Bootstrap support for A2E273 as seed ortholog is 100%.

Group of orthologs #212. Best score 91 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:91 T.vaginalis:91

Q5JD59              	100.00%		A2DAD4              	100.00%
                    	       		A2F015              	28.29%
Bootstrap support for Q5JD59 as seed ortholog is 100%.
Bootstrap support for A2DAD4 as seed ortholog is 100%.

Group of orthologs #213. Best score 91 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:91 T.vaginalis:50

Q5JH35              	100.00%		A2DCH7              	100.00%
                    	       		O96517              	99.71%
Bootstrap support for Q5JH35 as seed ortholog is 100%.
Bootstrap support for A2DCH7 as seed ortholog is 98%.

Group of orthologs #214. Best score 91 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:91 T.vaginalis:91

Q5JJF9              	100.00%		A2DKF2              	100.00%
                    	       		A2DCS2              	51.40%
Bootstrap support for Q5JJF9 as seed ortholog is 100%.
Bootstrap support for A2DKF2 as seed ortholog is 100%.

Group of orthologs #215. Best score 91 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:91 T.vaginalis:91

Q5JJ65              	100.00%		A2DV55              	100.00%
Bootstrap support for Q5JJ65 as seed ortholog is 100%.
Bootstrap support for A2DV55 as seed ortholog is 100%.

Group of orthologs #216. Best score 90 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:90 T.vaginalis:28

Q5JGR3              	100.00%		A2E9R8              	100.00%
Bootstrap support for Q5JGR3 as seed ortholog is 100%.
Bootstrap support for A2E9R8 as seed ortholog is 94%.

Group of orthologs #217. Best score 89 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:89 T.vaginalis:36

Q5JDG9              	100.00%		A2FTQ2              	100.00%
                    	       		A2G4T2              	100.00%
Bootstrap support for Q5JDG9 as seed ortholog is 100%.
Bootstrap support for A2FTQ2 as seed ortholog is 81%.
Bootstrap support for A2G4T2 as seed ortholog is 84%.

Group of orthologs #218. Best score 89 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:89 T.vaginalis:29

Q5JFJ9              	100.00%		A2G8D9              	100.00%
Bootstrap support for Q5JFJ9 as seed ortholog is 100%.
Bootstrap support for A2G8D9 as seed ortholog is 88%.

Group of orthologs #219. Best score 88 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:88 T.vaginalis:88

Q5JDM6              	100.00%		A2EJJ0              	100.00%
                    	       		A2DEM7              	99.03%
Bootstrap support for Q5JDM6 as seed ortholog is 100%.
Bootstrap support for A2EJJ0 as seed ortholog is 100%.

Group of orthologs #220. Best score 88 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:88 T.vaginalis:88

Q5JJ82              	100.00%		A2DC49              	100.00%
Bootstrap support for Q5JJ82 as seed ortholog is 100%.
Bootstrap support for A2DC49 as seed ortholog is 100%.

Group of orthologs #221. Best score 87 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:87 T.vaginalis:87

Q5JH34              	100.00%		A2EXM6              	100.00%
                    	       		A2DDH0              	97.79%
                    	       		A2DIZ2              	96.02%
                    	       		A2DB09              	94.25%
Bootstrap support for Q5JH34 as seed ortholog is 100%.
Bootstrap support for A2EXM6 as seed ortholog is 100%.

Group of orthologs #222. Best score 87 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:87 T.vaginalis:87

Q5JDS2              	100.00%		A2FED9              	100.00%
                    	       		A2E854              	34.44%
                    	       		A2FCD4              	34.44%
Bootstrap support for Q5JDS2 as seed ortholog is 100%.
Bootstrap support for A2FED9 as seed ortholog is 100%.

Group of orthologs #223. Best score 87 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:87 T.vaginalis:87

Q5JDH9              	100.00%		A2DHU8              	100.00%
                    	       		A2FXW4              	100.00%
Bootstrap support for Q5JDH9 as seed ortholog is 100%.
Bootstrap support for A2DHU8 as seed ortholog is 100%.
Bootstrap support for A2FXW4 as seed ortholog is 100%.

Group of orthologs #224. Best score 87 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:87 T.vaginalis:4

Q5JH21              	100.00%		A2GK91              	100.00%
Bootstrap support for Q5JH21 as seed ortholog is 100%.
Bootstrap support for A2GK91 as seed ortholog is 54%.
Alternative seed ortholog is A2FDJ5 (4 bits away from this cluster)

Group of orthologs #225. Best score 86 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 T.vaginalis:86

Q5JFZ5              	100.00%		A2DGQ4              	100.00%
                    	       		A2EK65              	100.00%
                    	       		A2FDE0              	100.00%
Bootstrap support for Q5JFZ5 as seed ortholog is 100%.
Bootstrap support for A2DGQ4 as seed ortholog is 100%.
Bootstrap support for A2EK65 as seed ortholog is 100%.
Bootstrap support for A2FDE0 as seed ortholog is 100%.

Group of orthologs #226. Best score 86 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 T.vaginalis:86

Q5JGM7              	100.00%		A2ED65              	100.00%
                    	       		A2EJC2              	87.41%
                    	       		A2FPM4              	66.43%
Bootstrap support for Q5JGM7 as seed ortholog is 100%.
Bootstrap support for A2ED65 as seed ortholog is 100%.

Group of orthologs #227. Best score 86 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 T.vaginalis:86

Q5JHC0              	100.00%		A2FMJ1              	100.00%
                    	       		A2DZV5              	69.60%
                    	       		A2E5L2              	69.20%
Bootstrap support for Q5JHC0 as seed ortholog is 100%.
Bootstrap support for A2FMJ1 as seed ortholog is 100%.

Group of orthologs #228. Best score 86 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 T.vaginalis:86

Q5JE34              	100.00%		A2DXG9              	100.00%
                    	       		A2FYC2              	100.00%
Bootstrap support for Q5JE34 as seed ortholog is 100%.
Bootstrap support for A2DXG9 as seed ortholog is 100%.
Bootstrap support for A2FYC2 as seed ortholog is 100%.

Group of orthologs #229. Best score 85 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:85 T.vaginalis:85

Q5JFY8              	100.00%		A2DX03              	100.00%
                    	       		A2FLV6              	62.10%
                    	       		A2DJY1              	11.02%
                    	       		A2FNK4              	11.02%
                    	       		A2DXP6              	5.91%
Bootstrap support for Q5JFY8 as seed ortholog is 100%.
Bootstrap support for A2DX03 as seed ortholog is 100%.

Group of orthologs #230. Best score 85 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:85 T.vaginalis:85

Q5JFM9              	100.00%		A2D876              	100.00%
Q5JF43              	11.29%		
Bootstrap support for Q5JFM9 as seed ortholog is 100%.
Bootstrap support for A2D876 as seed ortholog is 100%.

Group of orthologs #231. Best score 84 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:84 T.vaginalis:84

Q5JDW2              	100.00%		A2DCQ8              	100.00%
                    	       		A2DEN5              	85.45%
                    	       		A2FJ34              	57.34%
                    	       		A2DFJ1              	57.09%
                    	       		A2E9G8              	47.39%
Bootstrap support for Q5JDW2 as seed ortholog is 100%.
Bootstrap support for A2DCQ8 as seed ortholog is 100%.

Group of orthologs #232. Best score 84 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:84 T.vaginalis:84

Q5JED0              	100.00%		A2D969              	100.00%
Bootstrap support for Q5JED0 as seed ortholog is 100%.
Bootstrap support for A2D969 as seed ortholog is 100%.

Group of orthologs #233. Best score 83 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:83 T.vaginalis:83

Q5JIE9              	100.00%		A2DUL1              	100.00%
                    	       		A2G9X0              	31.06%
                    	       		A2E414              	14.02%
                    	       		A2FIE6              	13.64%
                    	       		A2FQQ2              	13.64%
                    	       		A2D9W5              	6.44%
                    	       		A2EAU8              	6.25%
                    	       		A2E6H5              	5.11%
Bootstrap support for Q5JIE9 as seed ortholog is 100%.
Bootstrap support for A2DUL1 as seed ortholog is 100%.

Group of orthologs #234. Best score 83 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:83 T.vaginalis:83

Q5JI42              	100.00%		A2GG34              	100.00%
                    	       		A2DEK5              	98.44%
Bootstrap support for Q5JI42 as seed ortholog is 100%.
Bootstrap support for A2GG34 as seed ortholog is 100%.

Group of orthologs #235. Best score 83 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:83 T.vaginalis:83

Q5JHD2              	100.00%		A2FJB3              	100.00%
Bootstrap support for Q5JHD2 as seed ortholog is 100%.
Bootstrap support for A2FJB3 as seed ortholog is 100%.

Group of orthologs #236. Best score 82 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:82 T.vaginalis:82

Q5JHV7              	100.00%		A2FNC5              	100.00%
                    	       		A2E8U8              	95.40%
                    	       		A2EML6              	87.20%
                    	       		A2EXA6              	62.60%
Bootstrap support for Q5JHV7 as seed ortholog is 100%.
Bootstrap support for A2FNC5 as seed ortholog is 100%.

Group of orthologs #237. Best score 82 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:82 T.vaginalis:82

Q5JIT0              	100.00%		A2DED8              	100.00%
Bootstrap support for Q5JIT0 as seed ortholog is 100%.
Bootstrap support for A2DED8 as seed ortholog is 100%.

Group of orthologs #238. Best score 82 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:32 T.vaginalis:82

Q5JEL3              	100.00%		A2DZ51              	100.00%
Bootstrap support for Q5JEL3 as seed ortholog is 95%.
Bootstrap support for A2DZ51 as seed ortholog is 100%.

Group of orthologs #239. Best score 82 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:82 T.vaginalis:82

Q5JGK8              	100.00%		A2E8E5              	100.00%
Bootstrap support for Q5JGK8 as seed ortholog is 100%.
Bootstrap support for A2E8E5 as seed ortholog is 100%.

Group of orthologs #240. Best score 81 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:81 T.vaginalis:81

Q5JE70              	100.00%		A2EZ45              	100.00%
                    	       		A2EX68              	25.77%
                    	       		A2DA23              	15.97%
                    	       		A2FAK6              	11.41%
                    	       		A2FFB6              	10.34%
Bootstrap support for Q5JE70 as seed ortholog is 100%.
Bootstrap support for A2EZ45 as seed ortholog is 100%.

Group of orthologs #241. Best score 81 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:81 T.vaginalis:29

Q5JH94              	100.00%		A2F737              	100.00%
                    	       		A2DT69              	10.32%
Bootstrap support for Q5JH94 as seed ortholog is 100%.
Bootstrap support for A2F737 as seed ortholog is 70%.
Alternative seed ortholog is A2DAB8 (29 bits away from this cluster)

Group of orthologs #242. Best score 81 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:81 T.vaginalis:31

Q5JG15              	100.00%		A2F8Q0              	100.00%
                    	       		A2F104              	55.41%
Bootstrap support for Q5JG15 as seed ortholog is 100%.
Bootstrap support for A2F8Q0 as seed ortholog is 85%.

Group of orthologs #243. Best score 80 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:80 T.vaginalis:38

Q5JH93              	100.00%		A2E0Y1              	100.00%
                    	       		A2G1B5              	60.96%
                    	       		A2EER7              	29.28%
Bootstrap support for Q5JH93 as seed ortholog is 100%.
Bootstrap support for A2E0Y1 as seed ortholog is 85%.

Group of orthologs #244. Best score 80 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:80 T.vaginalis:80

Q5JG26              	100.00%		A2DYU1              	100.00%
Bootstrap support for Q5JG26 as seed ortholog is 100%.
Bootstrap support for A2DYU1 as seed ortholog is 100%.

Group of orthologs #245. Best score 80 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:80 T.vaginalis:80

Q5JHE8              	100.00%		A2EH29              	100.00%
Bootstrap support for Q5JHE8 as seed ortholog is 100%.
Bootstrap support for A2EH29 as seed ortholog is 100%.

Group of orthologs #246. Best score 80 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:80 T.vaginalis:80

Q5JII2              	100.00%		A2GHR1              	100.00%
Bootstrap support for Q5JII2 as seed ortholog is 100%.
Bootstrap support for A2GHR1 as seed ortholog is 100%.

Group of orthologs #247. Best score 79 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:79 T.vaginalis:79

Q76CZ2              	100.00%		A2DRR1              	100.00%
                    	       		A2E130              	53.79%
                    	       		A2EN50              	24.45%
Bootstrap support for Q76CZ2 as seed ortholog is 100%.
Bootstrap support for A2DRR1 as seed ortholog is 100%.

Group of orthologs #248. Best score 79 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:79 T.vaginalis:79

O52958              	100.00%		A2FWD0              	100.00%
                    	       		A2FVB9              	56.61%
                    	       		A2FHP9              	39.33%
Bootstrap support for O52958 as seed ortholog is 100%.
Bootstrap support for A2FWD0 as seed ortholog is 100%.

Group of orthologs #249. Best score 79 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:79 T.vaginalis:79

Q5JGR7              	100.00%		A2G4P3              	100.00%
                    	       		A2DTU7              	98.50%
                    	       		A2DED9              	95.00%
Bootstrap support for Q5JGR7 as seed ortholog is 100%.
Bootstrap support for A2G4P3 as seed ortholog is 100%.

Group of orthologs #250. Best score 78 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:78 T.vaginalis:78

Q5JJG4              	100.00%		A2DDT1              	100.00%
                    	       		A2GN76              	100.00%
Bootstrap support for Q5JJG4 as seed ortholog is 100%.
Bootstrap support for A2DDT1 as seed ortholog is 100%.
Bootstrap support for A2GN76 as seed ortholog is 100%.

Group of orthologs #251. Best score 78 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:78 T.vaginalis:78

Q8X268              	100.00%		A2FI93              	100.00%
                    	       		A2EZV2              	63.52%
Bootstrap support for Q8X268 as seed ortholog is 100%.
Bootstrap support for A2FI93 as seed ortholog is 100%.

Group of orthologs #252. Best score 77 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:77 T.vaginalis:77

Q5JF11              	100.00%		A2DB89              	100.00%
                    	       		A2FWF9              	51.26%
                    	       		A2DIF8              	50.31%
                    	       		A2FWG0              	50.00%
                    	       		A2EHC4              	44.34%
                    	       		A2EYD9              	34.91%
Bootstrap support for Q5JF11 as seed ortholog is 100%.
Bootstrap support for A2DB89 as seed ortholog is 100%.

Group of orthologs #253. Best score 77 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:77 T.vaginalis:77

Q5JE01              	100.00%		A2DCY1              	100.00%
Bootstrap support for Q5JE01 as seed ortholog is 100%.
Bootstrap support for A2DCY1 as seed ortholog is 100%.

Group of orthologs #254. Best score 77 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:77 T.vaginalis:25

Q5JF34              	100.00%		A2EBM6              	100.00%
Bootstrap support for Q5JF34 as seed ortholog is 100%.
Bootstrap support for A2EBM6 as seed ortholog is 80%.

Group of orthologs #255. Best score 76 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:76 T.vaginalis:76

Q5JER1              	100.00%		A2DKL5              	100.00%
                    	       		A2DTG7              	44.09%
                    	       		A2FMC7              	35.65%
                    	       		A2DE53              	18.14%
Bootstrap support for Q5JER1 as seed ortholog is 100%.
Bootstrap support for A2DKL5 as seed ortholog is 100%.

Group of orthologs #256. Best score 76 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:76 T.vaginalis:76

Q5JE49              	100.00%		A2E7K3              	100.00%
Bootstrap support for Q5JE49 as seed ortholog is 100%.
Bootstrap support for A2E7K3 as seed ortholog is 100%.

Group of orthologs #257. Best score 75 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:75 T.vaginalis:75

Q5JJG5              	100.00%		A2F2J0              	100.00%
                    	       		A2G5E4              	97.97%
                    	       		A2G442              	76.14%
                    	       		A2F2J1              	72.59%
                    	       		A2E1R6              	17.26%
Bootstrap support for Q5JJG5 as seed ortholog is 100%.
Bootstrap support for A2F2J0 as seed ortholog is 100%.

Group of orthologs #258. Best score 75 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:75 T.vaginalis:75

Q5JHM5              	100.00%		A2D8W3              	100.00%
                    	       		A2DUX8              	20.05%
Bootstrap support for Q5JHM5 as seed ortholog is 100%.
Bootstrap support for A2D8W3 as seed ortholog is 100%.

Group of orthologs #259. Best score 75 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:75 T.vaginalis:75

Q5JI47              	100.00%		A2EHP1              	100.00%
Bootstrap support for Q5JI47 as seed ortholog is 100%.
Bootstrap support for A2EHP1 as seed ortholog is 100%.

Group of orthologs #260. Best score 74 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 T.vaginalis:21

Q5JIR7              	100.00%		A2DPV1              	100.00%
Q5JIR6              	100.00%		
Bootstrap support for Q5JIR7 as seed ortholog is 100%.
Bootstrap support for Q5JIR6 as seed ortholog is 100%.
Bootstrap support for A2DPV1 as seed ortholog is 71%.
Alternative seed ortholog is A2F1F8 (21 bits away from this cluster)

Group of orthologs #261. Best score 74 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 T.vaginalis:74

Q5JDZ9              	100.00%		A2D744              	100.00%
Bootstrap support for Q5JDZ9 as seed ortholog is 100%.
Bootstrap support for A2D744 as seed ortholog is 100%.

Group of orthologs #262. Best score 74 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 T.vaginalis:74

Q5JIR5              	100.00%		A2DKL3              	100.00%
Bootstrap support for Q5JIR5 as seed ortholog is 100%.
Bootstrap support for A2DKL3 as seed ortholog is 100%.

Group of orthologs #263. Best score 74 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 T.vaginalis:3

Q5JF76              	100.00%		A2GD32              	100.00%
Bootstrap support for Q5JF76 as seed ortholog is 100%.
Bootstrap support for A2GD32 as seed ortholog is 48%.
Alternative seed ortholog is A2EC75 (3 bits away from this cluster)

Group of orthologs #264. Best score 73 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:73 T.vaginalis:73

Q5JH08              	100.00%		A2ESX0              	100.00%
Q5JGZ1              	8.65%		A2EQA2              	48.89%
                    	       		A2FQN8              	27.70%
                    	       		A2D7Z3              	25.62%
                    	       		A2ET44              	21.98%
                    	       		A2ELX9              	21.72%
                    	       		A2EFC7              	20.94%
                    	       		A2E5N1              	20.42%
                    	       		A2EBU6              	19.12%
                    	       		A2FW93              	16.51%
                    	       		A2FAB7              	15.86%
Bootstrap support for Q5JH08 as seed ortholog is 100%.
Bootstrap support for A2ESX0 as seed ortholog is 100%.

Group of orthologs #265. Best score 73 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:73 T.vaginalis:17

Q5JHP6              	100.00%		A2EGN6              	100.00%
Bootstrap support for Q5JHP6 as seed ortholog is 100%.
Bootstrap support for A2EGN6 as seed ortholog is 75%.

Group of orthologs #266. Best score 73 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:73 T.vaginalis:73

Q5JH82              	100.00%		A2FYE0              	100.00%
Bootstrap support for Q5JH82 as seed ortholog is 100%.
Bootstrap support for A2FYE0 as seed ortholog is 100%.

Group of orthologs #267. Best score 72 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:72 T.vaginalis:72

Q5JGQ4              	100.00%		A2EIJ4              	100.00%
Q5JGQ5              	100.00%		A2FAK4              	100.00%
Q5JIE2              	10.97%		A2EZN8              	59.01%
                    	       		A2FGE4              	57.93%
                    	       		A2DNA1              	51.21%
                    	       		A2E1D3              	49.46%
                    	       		A2EWC7              	38.22%
                    	       		A2FV32              	37.91%
                    	       		A2FFY4              	36.67%
                    	       		A2FXA9              	35.33%
                    	       		A2DDU3              	35.08%
                    	       		A2FFX5              	34.61%
                    	       		A2EHC1              	34.09%
                    	       		A2E1Q1              	33.57%
                    	       		A2EAZ0              	33.57%
                    	       		A2G3A3              	33.57%
                    	       		A2EXN4              	31.92%
                    	       		A2DXT7              	29.44%
                    	       		A2DA86              	26.76%
                    	       		A2DQX7              	25.00%
                    	       		A2G6W9              	24.59%
                    	       		A2E1I5              	23.55%
                    	       		A2DYA5              	23.12%
                    	       		A2F4C7              	21.64%
                    	       		A2F6Y0              	20.25%
                    	       		A2F072              	19.35%
                    	       		A2EI88              	17.61%
                    	       		A2FNV3              	17.61%
                    	       		A2DRU2              	15.99%
                    	       		A2EWC8              	15.59%
                    	       		A2FPB3              	14.36%
                    	       		A2DZ48              	14.05%
                    	       		A2ELR3              	13.58%
                    	       		A2EYU5              	13.58%
                    	       		A2DFC0              	12.63%
                    	       		A2DZE0              	12.63%
                    	       		A2DRX2              	10.75%
                    	       		A2FGS0              	9.92%
                    	       		A2E001              	9.68%
                    	       		A2DFA1              	9.27%
                    	       		A2EWC4              	8.33%
                    	       		A2DTK5              	8.06%
                    	       		A2EF22              	7.93%
Bootstrap support for Q5JGQ4 as seed ortholog is 100%.
Bootstrap support for Q5JGQ5 as seed ortholog is 100%.
Bootstrap support for A2EIJ4 as seed ortholog is 100%.
Bootstrap support for A2FAK4 as seed ortholog is 100%.

Group of orthologs #268. Best score 72 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:72 T.vaginalis:72

P58502              	100.00%		A2GHA6              	100.00%
Q5JEH9              	6.68%		A2DFX3              	14.30%
                    	       		A2G0M3              	13.68%
                    	       		A2EQC7              	13.33%
                    	       		A2FW24              	13.24%
                    	       		A2FFV0              	12.80%
                    	       		A2FA02              	12.44%
                    	       		A2EAC5              	12.09%
                    	       		A2DLL7              	10.94%
                    	       		A2DMC5              	9.97%
Bootstrap support for P58502 as seed ortholog is 100%.
Bootstrap support for A2GHA6 as seed ortholog is 100%.

Group of orthologs #269. Best score 71 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:71 T.vaginalis:71

Q5JGN3              	100.00%		A2D8K0              	100.00%
                    	       		A2FDZ3              	54.11%
Bootstrap support for Q5JGN3 as seed ortholog is 100%.
Bootstrap support for A2D8K0 as seed ortholog is 100%.

Group of orthologs #270. Best score 71 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:71 T.vaginalis:71

Q5JIU7              	100.00%		A2E0S0              	100.00%
Q5JI19              	16.06%		
Bootstrap support for Q5JIU7 as seed ortholog is 100%.
Bootstrap support for A2E0S0 as seed ortholog is 100%.

Group of orthologs #271. Best score 71 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:71 T.vaginalis:71

Q5JCY8              	100.00%		A2F1C4              	100.00%
Bootstrap support for Q5JCY8 as seed ortholog is 100%.
Bootstrap support for A2F1C4 as seed ortholog is 100%.

Group of orthologs #272. Best score 70 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:70 T.vaginalis:70

Q5JDH4              	100.00%		A2DM53              	100.00%
Bootstrap support for Q5JDH4 as seed ortholog is 100%.
Bootstrap support for A2DM53 as seed ortholog is 100%.

Group of orthologs #273. Best score 69 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:69 T.vaginalis:69

Q5JGN1              	100.00%		A2D806              	100.00%
P58109              	66.15%		
Bootstrap support for Q5JGN1 as seed ortholog is 100%.
Bootstrap support for A2D806 as seed ortholog is 100%.

Group of orthologs #274. Best score 69 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:69 T.vaginalis:69

O74023              	100.00%		A2EGA1              	100.00%
Bootstrap support for O74023 as seed ortholog is 100%.
Bootstrap support for A2EGA1 as seed ortholog is 100%.

Group of orthologs #275. Best score 69 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:69 T.vaginalis:69

Q5JF03              	100.00%		A2EQG0              	100.00%
Bootstrap support for Q5JF03 as seed ortholog is 100%.
Bootstrap support for A2EQG0 as seed ortholog is 100%.

Group of orthologs #276. Best score 68 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:68 T.vaginalis:68

Q5JDH1              	100.00%		A2DIF2              	100.00%
                    	       		A2DIW1              	100.00%
                    	       		A2DUV8              	100.00%
                    	       		A2DW98              	100.00%
                    	       		A2DBI3              	95.67%
Bootstrap support for Q5JDH1 as seed ortholog is 100%.
Bootstrap support for A2DIF2 as seed ortholog is 100%.
Bootstrap support for A2DIW1 as seed ortholog is 100%.
Bootstrap support for A2DUV8 as seed ortholog is 100%.
Bootstrap support for A2DW98 as seed ortholog is 100%.

Group of orthologs #277. Best score 68 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:68 T.vaginalis:68

Q8X270              	100.00%		A2E6A0              	100.00%
                    	       		A2E639              	30.42%
                    	       		A2F8F0              	28.52%
                    	       		A2FHE7              	27.76%
                    	       		A2E026              	7.86%
Bootstrap support for Q8X270 as seed ortholog is 100%.
Bootstrap support for A2E6A0 as seed ortholog is 100%.

Group of orthologs #278. Best score 68 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:68 T.vaginalis:68

Q5JE35              	100.00%		A2E6Z9              	100.00%
                    	       		A2DH05              	95.36%
                    	       		A2D8A9              	92.72%
Bootstrap support for Q5JE35 as seed ortholog is 100%.
Bootstrap support for A2E6Z9 as seed ortholog is 100%.

Group of orthologs #279. Best score 68 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:68 T.vaginalis:68

Q5JJ72              	100.00%		A2G330              	100.00%
Bootstrap support for Q5JJ72 as seed ortholog is 100%.
Bootstrap support for A2G330 as seed ortholog is 100%.

Group of orthologs #280. Best score 67 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:67 T.vaginalis:67

Q5JIX5              	100.00%		A2DLU0              	100.00%
Bootstrap support for Q5JIX5 as seed ortholog is 100%.
Bootstrap support for A2DLU0 as seed ortholog is 100%.

Group of orthologs #281. Best score 67 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:67 T.vaginalis:67

Q5JHS3              	100.00%		A2EGJ9              	100.00%
Bootstrap support for Q5JHS3 as seed ortholog is 100%.
Bootstrap support for A2EGJ9 as seed ortholog is 100%.

Group of orthologs #282. Best score 66 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:66 T.vaginalis:66

Q5JIU3              	100.00%		A2FLA5              	100.00%
O07835              	38.43%		A2FLR6              	97.70%
                    	       		A2EXN1              	33.00%
                    	       		A2F855              	32.82%
                    	       		A2EDY6              	32.82%
                    	       		Q27088              	32.65%
                    	       		A2F2U9              	31.41%
Bootstrap support for Q5JIU3 as seed ortholog is 100%.
Bootstrap support for A2FLA5 as seed ortholog is 100%.

Group of orthologs #283. Best score 66 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:66 T.vaginalis:66

Q5JH09              	100.00%		A2FPV1              	100.00%
                    	       		A2DI06              	72.06%
                    	       		A2E256              	69.12%
                    	       		A2FUC9              	63.97%
                    	       		A2DQV0              	36.76%
                    	       		A2DXP9              	36.76%
                    	       		A2EIR1              	36.03%
Bootstrap support for Q5JH09 as seed ortholog is 100%.
Bootstrap support for A2FPV1 as seed ortholog is 100%.

Group of orthologs #284. Best score 66 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:6 T.vaginalis:7

Q5JHE3              	100.00%		A2E0P5              	100.00%
Q5JF02              	13.06%		
Bootstrap support for Q5JHE3 as seed ortholog is 56%.
Alternative seed ortholog is Q5JJE5 (6 bits away from this cluster)
Bootstrap support for A2E0P5 as seed ortholog is 63%.
Alternative seed ortholog is A2FTC7 (7 bits away from this cluster)

Group of orthologs #285. Best score 65 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:65 T.vaginalis:65

Q5JH23              	100.00%		A2FVQ7              	100.00%
                    	       		A2EWT8              	39.02%
                    	       		A2DUF4              	25.26%
                    	       		A2F745              	25.09%
                    	       		A2FNJ7              	24.91%
                    	       		A2F0D2              	24.56%
                    	       		A2F740              	24.39%
                    	       		A2G2E3              	23.69%
                    	       		A2EX45              	23.00%
                    	       		A2ES03              	20.91%
                    	       		A2FUR1              	20.91%
                    	       		A2EVB2              	19.16%
                    	       		A2DY49              	17.42%
                    	       		A2DBL3              	15.33%
                    	       		A2EVM2              	13.94%
Bootstrap support for Q5JH23 as seed ortholog is 100%.
Bootstrap support for A2FVQ7 as seed ortholog is 100%.

Group of orthologs #286. Best score 65 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:65 T.vaginalis:65

Q5JGR4              	100.00%		A2DQN8              	100.00%
                    	       		A2FIQ8              	100.00%
Bootstrap support for Q5JGR4 as seed ortholog is 100%.
Bootstrap support for A2DQN8 as seed ortholog is 100%.
Bootstrap support for A2FIQ8 as seed ortholog is 100%.

Group of orthologs #287. Best score 65 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:65 T.vaginalis:65

Q5JET2              	100.00%		A2EKH1              	100.00%
                    	       		A2FU77              	39.30%
Bootstrap support for Q5JET2 as seed ortholog is 100%.
Bootstrap support for A2EKH1 as seed ortholog is 100%.

Group of orthologs #288. Best score 65 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:65 T.vaginalis:65

Q5JE51              	100.00%		A2DAI6              	100.00%
Bootstrap support for Q5JE51 as seed ortholog is 100%.
Bootstrap support for A2DAI6 as seed ortholog is 100%.

Group of orthologs #289. Best score 65 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:65 T.vaginalis:65

Q5JJC9              	100.00%		A2DSN4              	100.00%
Bootstrap support for Q5JJC9 as seed ortholog is 100%.
Bootstrap support for A2DSN4 as seed ortholog is 100%.

Group of orthologs #290. Best score 64 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:64 T.vaginalis:64

Q5JH80              	100.00%		A2F7I8              	100.00%
Bootstrap support for Q5JH80 as seed ortholog is 100%.
Bootstrap support for A2F7I8 as seed ortholog is 100%.

Group of orthologs #291. Best score 63 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:63 T.vaginalis:63

Q5JG48              	100.00%		A2FBT6              	100.00%
                    	       		A2D794              	42.29%
                    	       		A2F7A5              	37.49%
                    	       		A2FN59              	33.37%
                    	       		A2DX44              	30.29%
                    	       		A2FZQ2              	30.17%
                    	       		A2EQD1              	29.49%
                    	       		A2D8L6              	29.03%
                    	       		A2DVJ1              	28.57%
                    	       		A2DH42              	27.54%
                    	       		A2DL88              	26.63%
                    	       		A2DWG0              	24.57%
                    	       		A2E0Y4              	24.23%
                    	       		A2EQ35              	24.23%
                    	       		A2E9G4              	24.11%
                    	       		A2EJ34              	23.77%
                    	       		A2DHJ2              	23.66%
                    	       		A2ENA8              	23.43%
                    	       		A2ET77              	23.20%
                    	       		A2EEY9              	22.97%
                    	       		A2DR17              	22.51%
                    	       		A2E4I1              	21.60%
                    	       		A2DGC3              	19.66%
                    	       		A2FV35              	18.74%
                    	       		A2DV68              	18.74%
                    	       		A2FB61              	16.57%
Bootstrap support for Q5JG48 as seed ortholog is 100%.
Bootstrap support for A2FBT6 as seed ortholog is 100%.

Group of orthologs #292. Best score 62 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:62 T.vaginalis:62

Q5JDR9              	100.00%		A2E709              	100.00%
Bootstrap support for Q5JDR9 as seed ortholog is 100%.
Bootstrap support for A2E709 as seed ortholog is 100%.

Group of orthologs #293. Best score 61 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 T.vaginalis:61

Q5JFS1              	100.00%		A2FFW8              	100.00%
                    	       		A2F4T2              	73.17%
                    	       		A2DIZ5              	32.25%
                    	       		A2EPW2              	14.63%
Bootstrap support for Q5JFS1 as seed ortholog is 100%.
Bootstrap support for A2FFW8 as seed ortholog is 100%.

Group of orthologs #294. Best score 61 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 T.vaginalis:61

Q5JI71              	100.00%		A2DP85              	100.00%
                    	       		A2DVU6              	87.42%
                    	       		A2ECM3              	57.20%
Bootstrap support for Q5JI71 as seed ortholog is 100%.
Bootstrap support for A2DP85 as seed ortholog is 100%.

Group of orthologs #295. Best score 61 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 T.vaginalis:61

Q5JFK1              	100.00%		A2DM80              	100.00%
                    	       		A2E932              	83.62%
Bootstrap support for Q5JFK1 as seed ortholog is 100%.
Bootstrap support for A2DM80 as seed ortholog is 100%.

Group of orthologs #296. Best score 61 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 T.vaginalis:61

Q5JG02              	100.00%		A2E293              	100.00%
                    	       		A2DM71              	8.58%
Bootstrap support for Q5JG02 as seed ortholog is 100%.
Bootstrap support for A2E293 as seed ortholog is 100%.

Group of orthologs #297. Best score 60 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:60 T.vaginalis:60

Q5JGM4              	100.00%		A2FDS0              	100.00%
                    	       		A2FWR9              	100.00%
                    	       		A2DSV0              	99.77%
                    	       		A2G9Z8              	96.55%
Bootstrap support for Q5JGM4 as seed ortholog is 100%.
Bootstrap support for A2FDS0 as seed ortholog is 100%.
Bootstrap support for A2FWR9 as seed ortholog is 100%.

Group of orthologs #298. Best score 60 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:60 T.vaginalis:60

Q5JF66              	100.00%		A2E378              	100.00%
Bootstrap support for Q5JF66 as seed ortholog is 100%.
Bootstrap support for A2E378 as seed ortholog is 100%.

Group of orthologs #299. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 T.vaginalis:59

Q5JGZ3              	100.00%		A2F4M8              	100.00%
Q5JGZ2              	6.00%		A2DIH7              	19.41%
                    	       		A2EQA1              	7.41%
Bootstrap support for Q5JGZ3 as seed ortholog is 100%.
Bootstrap support for A2F4M8 as seed ortholog is 100%.

Group of orthologs #300. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 T.vaginalis:59

Q5JIE1              	100.00%		A2DIN6              	100.00%
                    	       		A2F8Y8              	98.39%
Bootstrap support for Q5JIE1 as seed ortholog is 100%.
Bootstrap support for A2DIN6 as seed ortholog is 100%.

Group of orthologs #301. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 T.vaginalis:59

Q5JDA3              	100.00%		A2EGR6              	100.00%
Bootstrap support for Q5JDA3 as seed ortholog is 100%.
Bootstrap support for A2EGR6 as seed ortholog is 100%.

Group of orthologs #302. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 T.vaginalis:59

Q5JDG1              	100.00%		A2EJC9              	100.00%
Bootstrap support for Q5JDG1 as seed ortholog is 100%.
Bootstrap support for A2EJC9 as seed ortholog is 100%.

Group of orthologs #303. Best score 58 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:58 T.vaginalis:58

Q5JFU6              	100.00%		A2DB48              	100.00%
Q5JI23              	5.31%		A2EE15              	100.00%
                    	       		A2DIT9              	96.40%
Bootstrap support for Q5JFU6 as seed ortholog is 100%.
Bootstrap support for A2DB48 as seed ortholog is 100%.
Bootstrap support for A2EE15 as seed ortholog is 100%.

Group of orthologs #304. Best score 58 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:58 T.vaginalis:58

Q5JJG9              	100.00%		A2F592              	100.00%
                    	       		A2EMI2              	91.50%
Bootstrap support for Q5JJG9 as seed ortholog is 100%.
Bootstrap support for A2F592 as seed ortholog is 100%.

Group of orthologs #305. Best score 58 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:58 T.vaginalis:9

Q5JDB8              	100.00%		A2DF04              	100.00%
Bootstrap support for Q5JDB8 as seed ortholog is 100%.
Bootstrap support for A2DF04 as seed ortholog is 68%.
Alternative seed ortholog is A2E781 (9 bits away from this cluster)

Group of orthologs #306. Best score 57 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:57 T.vaginalis:57

Q5JG46              	100.00%		A2DZV6              	100.00%
                    	       		A2E383              	28.54%
                    	       		A2E222              	25.51%
                    	       		A2EZW3              	23.48%
                    	       		A2EUY2              	13.89%
Bootstrap support for Q5JG46 as seed ortholog is 100%.
Bootstrap support for A2DZV6 as seed ortholog is 100%.

Group of orthologs #307. Best score 57 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:57 T.vaginalis:57

Q5JDS0              	100.00%		A2FGN9              	100.00%
                    	       		A2DHG9              	16.48%
                    	       		A2EK66              	12.85%
                    	       		A2FZ87              	11.73%
Bootstrap support for Q5JDS0 as seed ortholog is 100%.
Bootstrap support for A2FGN9 as seed ortholog is 100%.

Group of orthologs #308. Best score 57 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:57 T.vaginalis:57

Q5JFK7              	100.00%		A2FTB2              	100.00%
                    	       		A2G8Q7              	32.56%
Bootstrap support for Q5JFK7 as seed ortholog is 100%.
Bootstrap support for A2FTB2 as seed ortholog is 100%.

Group of orthologs #309. Best score 56 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:56 T.vaginalis:56

Q5JHQ2              	100.00%		A2EQY4              	100.00%
Q5JGN8              	6.23%		A2F2A3              	22.83%
                    	       		A2FPX1              	21.09%
                    	       		A2EDP7              	19.85%
                    	       		A2FNV4              	13.65%
                    	       		A2FNP4              	11.91%
                    	       		A2DHN8              	11.91%
                    	       		A2E6W3              	11.17%
                    	       		A2DMN7              	8.19%
                    	       		A2DBL7              	7.94%
                    	       		A2EF78              	7.69%
                    	       		A2FTV4              	6.45%
Bootstrap support for Q5JHQ2 as seed ortholog is 100%.
Bootstrap support for A2EQY4 as seed ortholog is 100%.

Group of orthologs #310. Best score 56 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:56 T.vaginalis:56

Q5JDC7              	100.00%		A2DKP4              	100.00%
                    	       		A2DPS3              	100.00%
                    	       		A2DQS7              	100.00%
                    	       		A2ETR2              	100.00%
Bootstrap support for Q5JDC7 as seed ortholog is 100%.
Bootstrap support for A2DKP4 as seed ortholog is 100%.
Bootstrap support for A2DPS3 as seed ortholog is 100%.
Bootstrap support for A2DQS7 as seed ortholog is 100%.
Bootstrap support for A2ETR2 as seed ortholog is 100%.

Group of orthologs #311. Best score 56 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:15 T.vaginalis:56

Q5JDC4              	100.00%		A2ELH2              	100.00%
                    	       		A2DB84              	25.16%
                    	       		A2EQH5              	22.93%
Bootstrap support for Q5JDC4 as seed ortholog is 69%.
Alternative seed ortholog is Q5JIT3 (15 bits away from this cluster)
Bootstrap support for A2ELH2 as seed ortholog is 100%.

Group of orthologs #312. Best score 56 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:56 T.vaginalis:56

Q5JFY7              	100.00%		A2EY89              	100.00%
                    	       		A2EZM9              	18.18%
Bootstrap support for Q5JFY7 as seed ortholog is 100%.
Bootstrap support for A2EY89 as seed ortholog is 100%.

Group of orthologs #313. Best score 56 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:56 T.vaginalis:56

Q5JH78              	100.00%		A2F1G9              	100.00%
Bootstrap support for Q5JH78 as seed ortholog is 100%.
Bootstrap support for A2F1G9 as seed ortholog is 100%.

Group of orthologs #314. Best score 54 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:54 T.vaginalis:54

Q5JHR1              	100.00%		A2ES70              	100.00%
Q5JFH5              	100.00%		A2EID0              	100.00%
                    	       		A2EJ55              	100.00%
                    	       		A2F3W8              	34.38%
Bootstrap support for Q5JHR1 as seed ortholog is 100%.
Bootstrap support for Q5JFH5 as seed ortholog is 100%.
Bootstrap support for A2ES70 as seed ortholog is 100%.
Bootstrap support for A2EID0 as seed ortholog is 100%.
Bootstrap support for A2EJ55 as seed ortholog is 100%.

Group of orthologs #315. Best score 54 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:54 T.vaginalis:54

Q5JIY8              	100.00%		A2F0H5              	100.00%
                    	       		A2FYE6              	100.00%
                    	       		A2FUM8              	98.23%
Bootstrap support for Q5JIY8 as seed ortholog is 100%.
Bootstrap support for A2F0H5 as seed ortholog is 100%.
Bootstrap support for A2FYE6 as seed ortholog is 100%.

Group of orthologs #316. Best score 53 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:53 T.vaginalis:53

Q5JD61              	100.00%		A2EFS8              	100.00%
Q5JEG7              	100.00%		A2FEM3              	100.00%
Q5JJ85              	5.21%		A2EXA3              	46.52%
                    	       		A2F4H7              	35.57%
                    	       		A2E3S6              	32.48%
                    	       		A2EBK2              	31.84%
                    	       		A2ESH7              	31.54%
                    	       		A2EDM2              	31.31%
                    	       		A2EVG6              	31.31%
                    	       		A2DZF8              	30.37%
                    	       		A2DGS2              	30.14%
                    	       		A2FHQ8              	29.21%
                    	       		A2FDX7              	28.97%
                    	       		A2E6J3              	27.80%
                    	       		A2GCZ8              	26.62%
                    	       		A2FP64              	12.62%
Bootstrap support for Q5JD61 as seed ortholog is 100%.
Bootstrap support for Q5JEG7 as seed ortholog is 100%.
Bootstrap support for A2EFS8 as seed ortholog is 100%.
Bootstrap support for A2FEM3 as seed ortholog is 100%.

Group of orthologs #317. Best score 53 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:53 T.vaginalis:53

Q5JJ13              	100.00%		A2FJW8              	100.00%
Q5JGT2              	9.95%		
Q5JJ46              	9.00%		
Q5JIA3              	6.95%		
Q5JJ23              	6.95%		
Q5JI45              	6.32%		
Bootstrap support for Q5JJ13 as seed ortholog is 100%.
Bootstrap support for A2FJW8 as seed ortholog is 100%.

Group of orthologs #318. Best score 53 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:53 T.vaginalis:53

Q5JFS0              	100.00%		A2FNL2              	100.00%
Q5JI38              	14.46%		A2FCU7              	42.00%
Bootstrap support for Q5JFS0 as seed ortholog is 100%.
Bootstrap support for A2FNL2 as seed ortholog is 100%.

Group of orthologs #319. Best score 53 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:53 T.vaginalis:53

Q5JE48              	100.00%		A2EP66              	100.00%
                    	       		A2E9S7              	65.60%
Bootstrap support for Q5JE48 as seed ortholog is 100%.
Bootstrap support for A2EP66 as seed ortholog is 100%.

Group of orthologs #320. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 T.vaginalis:8

Q5JFV4              	100.00%		A2FH21              	100.00%
                    	       		A2DU28              	54.82%
                    	       		A2GB50              	46.18%
                    	       		A2EPP9              	29.24%
                    	       		A2FNR9              	19.27%
                    	       		A2DR67              	15.61%
Bootstrap support for Q5JFV4 as seed ortholog is 100%.
Bootstrap support for A2FH21 as seed ortholog is 54%.
Alternative seed ortholog is A2EIQ8 (8 bits away from this cluster)

Group of orthologs #321. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 T.vaginalis:10

Q5JFF9              	100.00%		A2FWK6              	100.00%
                    	       		A2DS62              	67.62%
                    	       		A2FFY2              	29.18%
                    	       		A2ECH4              	10.68%
Bootstrap support for Q5JFF9 as seed ortholog is 100%.
Bootstrap support for A2FWK6 as seed ortholog is 66%.
Alternative seed ortholog is A2EGT3 (10 bits away from this cluster)

Group of orthologs #322. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 T.vaginalis:52

Q5JG27              	100.00%		A2ELT6              	100.00%
Bootstrap support for Q5JG27 as seed ortholog is 100%.
Bootstrap support for A2ELT6 as seed ortholog is 100%.

Group of orthologs #323. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 T.vaginalis:52

Q5JDW9              	100.00%		A2FQ77              	100.00%
Bootstrap support for Q5JDW9 as seed ortholog is 100%.
Bootstrap support for A2FQ77 as seed ortholog is 100%.

Group of orthologs #324. Best score 51 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:51 T.vaginalis:51

Q5JEA0              	100.00%		A2EJL4              	100.00%
                    	       		A2FKF2              	77.11%
                    	       		A2FKC5              	19.88%
Bootstrap support for Q5JEA0 as seed ortholog is 100%.
Bootstrap support for A2EJL4 as seed ortholog is 100%.

Group of orthologs #325. Best score 51 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:7 T.vaginalis:0

Q5JIX4              	100.00%		A2EK04              	100.00%
Bootstrap support for Q5JIX4 as seed ortholog is 54%.
Alternative seed ortholog is Q5JJE5 (7 bits away from this cluster)
Bootstrap support for A2EK04 as seed ortholog is 49%.
Alternative seed ortholog is A2E8N7 (0 bits away from this cluster)

Group of orthologs #326. Best score 50 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:50 T.vaginalis:50

Q5JE50              	100.00%		A2DGQ3              	100.00%
                    	       		A2FBZ2              	100.00%
                    	       		A2DB88              	96.92%
                    	       		A2FM73              	96.15%
Bootstrap support for Q5JE50 as seed ortholog is 100%.
Bootstrap support for A2DGQ3 as seed ortholog is 100%.
Bootstrap support for A2FBZ2 as seed ortholog is 100%.

Group of orthologs #327. Best score 50 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:50 T.vaginalis:50

Q5JHT3              	100.00%		A2EJQ9              	100.00%
                    	       		A2DNA3              	29.63%
Bootstrap support for Q5JHT3 as seed ortholog is 100%.
Bootstrap support for A2EJQ9 as seed ortholog is 100%.

Group of orthologs #328. Best score 50 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:50 T.vaginalis:50

Q5JFL6              	100.00%		A2FZ93              	100.00%
                    	       		A2F2P2              	87.19%
Bootstrap support for Q5JFL6 as seed ortholog is 100%.
Bootstrap support for A2FZ93 as seed ortholog is 100%.

Group of orthologs #329. Best score 50 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:50 T.vaginalis:50

Q5JJG2              	100.00%		A2DYA8              	100.00%
Bootstrap support for Q5JJG2 as seed ortholog is 100%.
Bootstrap support for A2DYA8 as seed ortholog is 100%.

Group of orthologs #330. Best score 50 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:50 T.vaginalis:50

Q5JGF3              	100.00%		A2E1L5              	100.00%
Bootstrap support for Q5JGF3 as seed ortholog is 100%.
Bootstrap support for A2E1L5 as seed ortholog is 100%.

Group of orthologs #331. Best score 49 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:49 T.vaginalis:49

Q5JJF5              	100.00%		A2DYP9              	100.00%
                    	       		A2D7Q5              	93.60%
                    	       		A2EGC6              	92.99%
                    	       		A2EBQ2              	92.99%
                    	       		A2G2I2              	90.24%
Bootstrap support for Q5JJF5 as seed ortholog is 100%.
Bootstrap support for A2DYP9 as seed ortholog is 100%.

Group of orthologs #332. Best score 49 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:49 T.vaginalis:49

Q5JJD0              	100.00%		A2DSU3              	100.00%
                    	       		A2E3F1              	100.00%
                    	       		A2FZ94              	100.00%
Bootstrap support for Q5JJD0 as seed ortholog is 100%.
Bootstrap support for A2DSU3 as seed ortholog is 100%.
Bootstrap support for A2E3F1 as seed ortholog is 100%.
Bootstrap support for A2FZ94 as seed ortholog is 100%.

Group of orthologs #333. Best score 47 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:47 T.vaginalis:1

Q5JCX9              	100.00%		A2DZ34              	100.00%
                    	       		A2DUI1              	47.72%
                    	       		A2FGI6              	34.65%
                    	       		A2G054              	31.00%
                    	       		A2FZU5              	28.88%
                    	       		A2FJG3              	28.57%
                    	       		A2ESW6              	6.08%
Bootstrap support for Q5JCX9 as seed ortholog is 100%.
Bootstrap support for A2DZ34 as seed ortholog is 49%.
Alternative seed ortholog is A2EIQ8 (1 bits away from this cluster)

Group of orthologs #334. Best score 47 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:47 T.vaginalis:47

Q5JDL4              	100.00%		A2DQG6              	100.00%
Bootstrap support for Q5JDL4 as seed ortholog is 100%.
Bootstrap support for A2DQG6 as seed ortholog is 100%.

Group of orthologs #335. Best score 47 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:47 T.vaginalis:47

Q5JE88              	100.00%		A2DQ63              	100.00%
Bootstrap support for Q5JE88 as seed ortholog is 100%.
Bootstrap support for A2DQ63 as seed ortholog is 100%.

Group of orthologs #336. Best score 46 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:46 T.vaginalis:46

Q5JHM7              	100.00%		A2F8P7              	100.00%
Q5JEC0              	100.00%		A2EK92              	100.00%
Bootstrap support for Q5JHM7 as seed ortholog is 100%.
Bootstrap support for Q5JEC0 as seed ortholog is 100%.
Bootstrap support for A2F8P7 as seed ortholog is 100%.
Bootstrap support for A2EK92 as seed ortholog is 100%.

Group of orthologs #337. Best score 46 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:46 T.vaginalis:46

Q5JD52              	100.00%		A2FGX0              	100.00%
                    	       		A2F2D7              	62.27%
                    	       		A2G3I4              	58.24%
Bootstrap support for Q5JD52 as seed ortholog is 100%.
Bootstrap support for A2FGX0 as seed ortholog is 100%.

Group of orthologs #338. Best score 46 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:46 T.vaginalis:46

Q5JIX8              	100.00%		A2ECU9              	100.00%
Bootstrap support for Q5JIX8 as seed ortholog is 100%.
Bootstrap support for A2ECU9 as seed ortholog is 100%.

Group of orthologs #339. Best score 45 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:45 T.vaginalis:45

Q5JJF0              	100.00%		A2FAI4              	100.00%
                    	       		A2G5Z9              	41.71%
                    	       		A2FAE3              	20.44%
Bootstrap support for Q5JJF0 as seed ortholog is 100%.
Bootstrap support for A2FAI4 as seed ortholog is 100%.

Group of orthologs #340. Best score 45 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:45 T.vaginalis:2

Q5JDF3              	100.00%		A2EHE0              	100.00%
                    	       		A2FJ33              	70.06%
Bootstrap support for Q5JDF3 as seed ortholog is 100%.
Bootstrap support for A2EHE0 as seed ortholog is 52%.
Alternative seed ortholog is A2FWW5 (2 bits away from this cluster)

Group of orthologs #341. Best score 45 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:45 T.vaginalis:45

Q5JED8              	100.00%		A2FEZ1              	100.00%
                    	       		A2FXA0              	26.93%
Bootstrap support for Q5JED8 as seed ortholog is 100%.
Bootstrap support for A2FEZ1 as seed ortholog is 100%.

Group of orthologs #342. Best score 44 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:44 T.vaginalis:44

Q5JEL5              	100.00%		A2EQH9              	100.00%
Bootstrap support for Q5JEL5 as seed ortholog is 100%.
Bootstrap support for A2EQH9 as seed ortholog is 100%.

Group of orthologs #343. Best score 43 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:43 T.vaginalis:43

Q5JEB9              	100.00%		A2F1W8              	100.00%
                    	       		A2DMZ1              	34.72%
                    	       		Q4G2C1              	31.11%
                    	       		A2F6R3              	27.78%
                    	       		A2E312              	24.44%
                    	       		Q4G2C2              	23.06%
                    	       		A2FUW5              	22.78%
                    	       		A2FH53              	22.22%
                    	       		A2EQ49              	19.72%
                    	       		Q4G2C0              	19.44%
                    	       		A2FKV0              	17.50%
                    	       		Q4G2B9              	17.50%
                    	       		A2F4Z4              	16.67%
                    	       		A2DRK7              	16.39%
                    	       		Q4G2B8              	16.11%
                    	       		A2EEL9              	15.56%
                    	       		A2G473              	15.28%
                    	       		Q4G2D3              	15.00%
                    	       		Q4G2A9              	15.00%
                    	       		A2DTT5              	15.00%
                    	       		A2EMB9              	15.00%
                    	       		A2GJW9              	14.72%
                    	       		A2EWV7              	14.17%
                    	       		Q4G288              	14.17%
                    	       		A2EWA5              	13.61%
                    	       		A2FEU4              	13.61%
                    	       		Q4G2C9              	13.33%
                    	       		A2G4K9              	13.33%
                    	       		A2DSR0              	12.78%
                    	       		A2ESK3              	12.78%
                    	       		Q4FIE5              	12.78%
                    	       		A2E9I9              	12.78%
                    	       		A2F5C1              	12.78%
                    	       		A2G3I9              	12.78%
                    	       		A2EVE6              	12.50%
                    	       		A2ESY7              	12.50%
                    	       		A2FSZ4              	12.50%
                    	       		A2D7C1              	12.22%
                    	       		Q4G291              	12.22%
                    	       		Q4G294              	12.22%
                    	       		A2EAU9              	11.94%
                    	       		Q4FIE1              	11.94%
                    	       		A2E8Q4              	11.94%
                    	       		A2EXV3              	11.94%
                    	       		Q4FIE4              	11.94%
                    	       		A2DYD3              	11.94%
                    	       		A2F731              	11.94%
                    	       		A2FVW8              	11.94%
                    	       		A2D8H5              	11.67%
                    	       		A2DWL9              	11.67%
                    	       		A2E5I7              	11.67%
                    	       		A2EL65              	11.67%
                    	       		A2FHX4              	11.67%
                    	       		A2E2M2              	11.39%
                    	       		A2EZ62              	11.39%
                    	       		A2FHI9              	11.39%
                    	       		Q4G2B3              	11.39%
                    	       		A2DFV5              	11.39%
                    	       		A2G845              	11.39%
                    	       		Q4G2A8              	11.39%
                    	       		Q4G2B2              	11.39%
                    	       		Q4FID5              	11.11%
                    	       		A2EDH4              	11.11%
                    	       		A2EPF4              	11.11%
                    	       		Q4FID4              	11.11%
                    	       		A2DJA8              	10.83%
                    	       		A2DLU9              	10.83%
                    	       		A2DWQ3              	10.83%
                    	       		A2FYN2              	10.83%
                    	       		Q4G2B5              	10.83%
                    	       		Q4FID7              	10.83%
                    	       		A2ECK7              	10.83%
                    	       		Q4G295              	10.83%
                    	       		Q4G296              	10.83%
                    	       		A2D8H9              	10.56%
                    	       		A2EF89              	10.56%
                    	       		A2EX52              	10.56%
                    	       		Q4G2A5              	10.56%
                    	       		Q4G2D0              	10.56%
                    	       		A2DC15              	10.56%
                    	       		Q4G2A4              	10.56%
                    	       		A2ESW8              	10.56%
                    	       		Q4FIE6              	10.56%
                    	       		Q4G298              	10.56%
                    	       		A2DJK8              	10.28%
                    	       		A2DY65              	10.28%
                    	       		A2EKA1              	10.28%
                    	       		A2EKN4              	10.28%
                    	       		A2FAP9              	10.28%
                    	       		A2FDY9              	10.28%
                    	       		A2FJ75              	10.28%
                    	       		Q4FID6              	10.28%
                    	       		A2FFY5              	10.28%
                    	       		Q4G2C5              	10.28%
                    	       		A2DXC2              	10.00%
                    	       		A2FIJ0              	10.00%
                    	       		A2FJT3              	10.00%
                    	       		A2FYW2              	10.00%
                    	       		Q4G290              	10.00%
                    	       		Q4G2C4              	10.00%
                    	       		A2DIT5              	10.00%
                    	       		A2E9N3              	10.00%
                    	       		Q4G2C6              	10.00%
                    	       		A2DRV6              	10.00%
                    	       		A2E5L9              	10.00%
                    	       		A2F1X0              	10.00%
                    	       		A2F446              	10.00%
                    	       		A2FJT8              	10.00%
                    	       		A2FW27              	10.00%
                    	       		Q4G2A7              	10.00%
                    	       		A2DMY4              	9.72%
                    	       		A2FE96              	9.72%
                    	       		A2FI73              	9.72%
                    	       		A2E0I5              	9.72%
                    	       		A2EE72              	9.72%
                    	       		A2F6B8              	9.72%
                    	       		A2FBE2              	9.72%
                    	       		A2GBJ0              	9.72%
                    	       		Q4G2B1              	9.72%
                    	       		Q4G2B6              	9.72%
                    	       		A2DKL4              	9.44%
                    	       		A2DW43              	9.44%
                    	       		A2E8I0              	9.44%
                    	       		A2ECH8              	9.44%
                    	       		A2EW65              	9.44%
                    	       		A2F5P5              	9.44%
                    	       		A2GDY7              	9.44%
                    	       		A2DL60              	9.44%
                    	       		A2EU59              	9.44%
                    	       		A2FJF4              	9.44%
                    	       		A2FNU5              	9.44%
                    	       		A2FVK0              	9.44%
                    	       		A2FXZ3              	9.44%
                    	       		Q4FID9              	9.44%
                    	       		Q4G2B0              	9.44%
                    	       		A2DC35              	9.44%
                    	       		A2DQW8              	9.44%
                    	       		A2DUM9              	9.44%
                    	       		A2E9S2              	9.44%
                    	       		A2EI68              	9.44%
                    	       		A2FMB2              	9.44%
                    	       		A2FSW8              	9.44%
                    	       		A2HCS5              	9.44%
                    	       		A2DCC5              	9.17%
                    	       		A2DU69              	9.17%
                    	       		A2E625              	9.17%
                    	       		A2E8M0              	9.17%
                    	       		A2F128              	9.17%
                    	       		A2GDJ2              	9.17%
                    	       		Q4G2D2              	9.17%
                    	       		A2D8F3              	9.17%
                    	       		A2DJF6              	9.17%
                    	       		A2FRN3              	9.17%
                    	       		A2FYF0              	9.17%
                    	       		Q3YE90              	9.17%
                    	       		Q4FIE3              	9.17%
                    	       		Q4G292              	9.17%
                    	       		A2DAD5              	9.17%
                    	       		A2DC18              	9.17%
                    	       		A2EE95              	9.17%
                    	       		A2EWE4              	9.17%
                    	       		Q4G2D1              	9.17%
                    	       		A2DL05              	8.89%
                    	       		A2DXY3              	8.89%
                    	       		Q4FIE2              	8.89%
                    	       		Q4G289              	8.89%
                    	       		Q4G293              	8.89%
                    	       		Q4G2A0              	8.89%
                    	       		A2DTP5              	8.89%
                    	       		A2DZJ4              	8.89%
                    	       		A2EI96              	8.89%
                    	       		A2DJT9              	8.61%
                    	       		A2E5E2              	8.61%
                    	       		A2FWF3              	8.61%
                    	       		A2G2G1              	8.61%
                    	       		Q4FID8              	8.61%
                    	       		A2DNW2              	8.61%
                    	       		A2ELG5              	8.61%
                    	       		A2F5E2              	8.61%
                    	       		A2F797              	8.61%
                    	       		A2FQ27              	8.61%
                    	       		A2FYL0              	8.61%
                    	       		A2GZN9              	8.61%
                    	       		A2ES63              	8.61%
                    	       		A2F3B3              	8.61%
                    	       		A2G1A1              	8.61%
                    	       		A2G412              	8.61%
                    	       		Q4G2A6              	8.61%
                    	       		Q3YE89              	8.33%
                    	       		A2DUT4              	8.33%
                    	       		A2EEB3              	8.33%
                    	       		A2EGH0              	8.33%
                    	       		A2ESY6              	8.06%
                    	       		Q4G2C3              	8.06%
                    	       		Q4G2C8              	8.06%
                    	       		Q4G2D6              	8.06%
                    	       		A2DFV6              	8.06%
                    	       		A2DYG4              	8.06%
                    	       		A2E0C0              	8.06%
                    	       		A2E9E6              	8.06%
                    	       		A2EJU0              	8.06%
                    	       		A2EWS4              	8.06%
                    	       		A2G3A8              	8.06%
                    	       		A2GIP9              	8.06%
                    	       		Q4G2C7              	8.06%
                    	       		A2D874              	8.06%
                    	       		A2E4A1              	8.06%
                    	       		A2EWL6              	8.06%
                    	       		A2FR00              	8.06%
                    	       		A2FV67              	7.78%
                    	       		A2D8P5              	7.78%
                    	       		A2DV63              	7.78%
                    	       		A2E7L0              	7.78%
                    	       		A2FSA5              	7.78%
                    	       		A2G3Z0              	7.78%
                    	       		A2DQG8              	7.78%
                    	       		A2EII0              	7.78%
                    	       		A2EX11              	7.78%
                    	       		A2FWD3              	7.78%
                    	       		Q4FIE8              	7.78%
                    	       		Q4G2A2              	7.78%
                    	       		A2E9D3              	7.50%
                    	       		A2EYR4              	7.50%
                    	       		A2FQ53              	7.50%
                    	       		A2FXD4              	7.50%
                    	       		Q4G297              	7.50%
                    	       		A2F926              	7.50%
                    	       		A2FN85              	7.50%
                    	       		A2DAY7              	7.22%
                    	       		A2DNV2              	7.22%
                    	       		A2DPD6              	7.22%
                    	       		A2ELV0              	7.22%
                    	       		Q4FIE0              	7.22%
                    	       		Q4G299              	7.22%
                    	       		A2DAL1              	7.22%
                    	       		A2DWP5              	7.22%
                    	       		A2EDH5              	7.22%
                    	       		A2D7W8              	7.22%
                    	       		A2E1J0              	7.22%
                    	       		A2F278              	7.22%
                    	       		A2DI65              	6.94%
                    	       		A2EA53              	6.94%
                    	       		A2EV06              	6.94%
                    	       		A2EVR7              	6.94%
                    	       		A2FQU7              	6.94%
                    	       		Q4G2D4              	6.94%
                    	       		Q4FIE7              	6.94%
                    	       		A2EQP4              	6.67%
                    	       		A2EPG3              	6.67%
                    	       		A2FZ42              	6.67%
                    	       		A2F905              	6.67%
                    	       		A2FV17              	6.67%
                    	       		A2G189              	6.67%
                    	       		A2FTT1              	6.39%
                    	       		A2D9E3              	6.39%
                    	       		A2E4Y3              	6.39%
                    	       		A2G974              	6.39%
                    	       		A2GGN6              	6.39%
                    	       		Q4G2A1              	6.39%
                    	       		A2DXB8              	6.11%
                    	       		A2E3Q3              	6.11%
                    	       		A2FBG0              	6.11%
                    	       		A2DX20              	6.11%
                    	       		A2FVD4              	6.11%
                    	       		A2DZN5              	5.83%
                    	       		A2EVM8              	5.83%
                    	       		A2GEQ6              	5.83%
                    	       		A2EJI6              	5.83%
                    	       		A2EX28              	5.83%
                    	       		Q4G2D5              	5.83%
                    	       		A2E619              	5.83%
                    	       		A2G4Z9              	5.83%
                    	       		A2DX66              	5.56%
                    	       		A2DZ39              	5.28%
                    	       		A2G8R9              	5.00%
                    	       		A2DLV9              	5.00%
                    	       		A2E2M1              	5.00%
                    	       		A2E4D7              	5.00%
                    	       		A2DE26              	5.00%
                    	       		A2E4C7              	5.00%
Bootstrap support for Q5JEB9 as seed ortholog is 100%.
Bootstrap support for A2F1W8 as seed ortholog is 100%.

Group of orthologs #344. Best score 42 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:42 T.vaginalis:42

Q5JFQ4              	100.00%		A2GIP8              	100.00%
                    	       		A2FH79              	56.72%
Bootstrap support for Q5JFQ4 as seed ortholog is 100%.
Bootstrap support for A2GIP8 as seed ortholog is 100%.

Group of orthologs #345. Best score 42 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:42 T.vaginalis:42

Q5JHP5              	100.00%		A2EQ54              	100.00%
Bootstrap support for Q5JHP5 as seed ortholog is 100%.
Bootstrap support for A2EQ54 as seed ortholog is 100%.