###################################
355 groups of orthologs
423 in-paralogs from P.kodakaraensis
473 in-paralogs from T.rubrum
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 782 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:782 T.rubrum:51

Q5JE32              	100.00%		F2STE4              	100.00%
Bootstrap support for Q5JE32 as seed ortholog is 100%.
Bootstrap support for F2STE4 as seed ortholog is 74%.
Alternative seed ortholog is F2SPY7 (51 bits away from this cluster)

Group of orthologs #2. Best score 707 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:707 T.rubrum:291

Q5JE33              	100.00%		F2SXT8              	100.00%
Bootstrap support for Q5JE33 as seed ortholog is 100%.
Bootstrap support for F2SXT8 as seed ortholog is 100%.

Group of orthologs #3. Best score 609 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:609 T.rubrum:167

Q5JE98              	100.00%		F2SS16              	100.00%
Q9V2X2              	53.53%		
Bootstrap support for Q5JE98 as seed ortholog is 100%.
Bootstrap support for F2SS16 as seed ortholog is 99%.

Group of orthologs #4. Best score 559 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:559 T.rubrum:417

Q5JIR2              	100.00%		F2SKS3              	100.00%
Bootstrap support for Q5JIR2 as seed ortholog is 100%.
Bootstrap support for F2SKS3 as seed ortholog is 100%.

Group of orthologs #5. Best score 550 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:550 T.rubrum:447

Q5JIR3              	100.00%		F2SYU1              	100.00%
Bootstrap support for Q5JIR3 as seed ortholog is 100%.
Bootstrap support for F2SYU1 as seed ortholog is 100%.

Group of orthologs #6. Best score 536 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:536 T.rubrum:203

Q5JJ31              	100.00%		F2SMH0              	100.00%
Bootstrap support for Q5JJ31 as seed ortholog is 100%.
Bootstrap support for F2SMH0 as seed ortholog is 99%.

Group of orthologs #7. Best score 509 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:509 T.rubrum:364

Q5JDX6              	100.00%		F2SRP0              	100.00%
Bootstrap support for Q5JDX6 as seed ortholog is 100%.
Bootstrap support for F2SRP0 as seed ortholog is 100%.

Group of orthologs #8. Best score 495 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:495 T.rubrum:154

Q5JDF4              	100.00%		F2SY86              	100.00%
Bootstrap support for Q5JDF4 as seed ortholog is 100%.
Bootstrap support for F2SY86 as seed ortholog is 97%.

Group of orthologs #9. Best score 462 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:462 T.rubrum:462

Q5JGF1              	100.00%		F2SUS3              	100.00%
Bootstrap support for Q5JGF1 as seed ortholog is 100%.
Bootstrap support for F2SUS3 as seed ortholog is 100%.

Group of orthologs #10. Best score 455 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:455 T.rubrum:186

Q5JFZ4              	100.00%		F2SBY9              	100.00%
Bootstrap support for Q5JFZ4 as seed ortholog is 100%.
Bootstrap support for F2SBY9 as seed ortholog is 99%.

Group of orthologs #11. Best score 451 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:305 T.rubrum:451

Q9YGB0              	100.00%		F2SKS5              	100.00%
Bootstrap support for Q9YGB0 as seed ortholog is 100%.
Bootstrap support for F2SKS5 as seed ortholog is 100%.

Group of orthologs #12. Best score 445 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:332 T.rubrum:445

Q5JEV6              	100.00%		F2SH28              	100.00%
Bootstrap support for Q5JEV6 as seed ortholog is 100%.
Bootstrap support for F2SH28 as seed ortholog is 100%.

Group of orthologs #13. Best score 431 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:431 T.rubrum:294

Q8NKR7              	100.00%		F2SF18              	100.00%
Bootstrap support for Q8NKR7 as seed ortholog is 100%.
Bootstrap support for F2SF18 as seed ortholog is 99%.

Group of orthologs #14. Best score 416 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:416 T.rubrum:416

Q5JIP3              	100.00%		F2SPQ6              	100.00%
Bootstrap support for Q5JIP3 as seed ortholog is 100%.
Bootstrap support for F2SPQ6 as seed ortholog is 100%.

Group of orthologs #15. Best score 405 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:405 T.rubrum:37

P61111              	100.00%		F2SMK7              	100.00%
Q52500              	70.40%		
Bootstrap support for P61111 as seed ortholog is 100%.
Bootstrap support for F2SMK7 as seed ortholog is 83%.

Group of orthologs #16. Best score 403 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:403 T.rubrum:22

Q5JJA2              	100.00%		F2SL70              	100.00%
Bootstrap support for Q5JJA2 as seed ortholog is 100%.
Bootstrap support for F2SL70 as seed ortholog is 56%.
Alternative seed ortholog is F2SI67 (22 bits away from this cluster)

Group of orthologs #17. Best score 370 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:370 T.rubrum:20

O93623              	100.00%		F2SIN1              	100.00%
Bootstrap support for O93623 as seed ortholog is 100%.
Bootstrap support for F2SIN1 as seed ortholog is 71%.
Alternative seed ortholog is F2SXH8 (20 bits away from this cluster)

Group of orthologs #18. Best score 366 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:366 T.rubrum:366

Q5JID8              	100.00%		F2SMP0              	100.00%
Bootstrap support for Q5JID8 as seed ortholog is 100%.
Bootstrap support for F2SMP0 as seed ortholog is 100%.

Group of orthologs #19. Best score 366 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:366 T.rubrum:7

Q5JGE5              	100.00%		F2SX80              	100.00%
Bootstrap support for Q5JGE5 as seed ortholog is 100%.
Bootstrap support for F2SX80 as seed ortholog is 59%.
Alternative seed ortholog is F2SQ22 (7 bits away from this cluster)

Group of orthologs #20. Best score 362 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:362 T.rubrum:1

Q5JHS5              	100.00%		F2SH24              	100.00%
Bootstrap support for Q5JHS5 as seed ortholog is 100%.
Bootstrap support for F2SH24 as seed ortholog is 51%.
Alternative seed ortholog is F2T172 (1 bits away from this cluster)

Group of orthologs #21. Best score 358 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:358 T.rubrum:132

Q5JFZ3              	100.00%		F2SQR4              	100.00%
                    	       		F2SIK5              	15.31%
                    	       		F2T102              	9.06%
Bootstrap support for Q5JFZ3 as seed ortholog is 100%.
Bootstrap support for F2SQR4 as seed ortholog is 99%.

Group of orthologs #22. Best score 343 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:343 T.rubrum:198

Q5JDL3              	100.00%		F2SGV0              	100.00%
Bootstrap support for Q5JDL3 as seed ortholog is 100%.
Bootstrap support for F2SGV0 as seed ortholog is 100%.

Group of orthologs #23. Best score 339 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:339 T.rubrum:15

Q5JIT1              	100.00%		F2SJT0              	100.00%
Bootstrap support for Q5JIT1 as seed ortholog is 100%.
Bootstrap support for F2SJT0 as seed ortholog is 71%.
Alternative seed ortholog is F2SR09 (15 bits away from this cluster)

Group of orthologs #24. Best score 338 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:338 T.rubrum:338

Q5JJC8              	100.00%		F2SYS3              	100.00%
Bootstrap support for Q5JJC8 as seed ortholog is 100%.
Bootstrap support for F2SYS3 as seed ortholog is 100%.

Group of orthologs #25. Best score 334 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:334 T.rubrum:184

Q5JDZ7              	100.00%		F2SP39              	100.00%
                    	       		F2T185              	36.91%
Bootstrap support for Q5JDZ7 as seed ortholog is 100%.
Bootstrap support for F2SP39 as seed ortholog is 99%.

Group of orthologs #26. Best score 327 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:327 T.rubrum:327

Q5JH71              	100.00%		F2SHE6              	100.00%
Bootstrap support for Q5JH71 as seed ortholog is 100%.
Bootstrap support for F2SHE6 as seed ortholog is 100%.

Group of orthologs #27. Best score 326 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:326 T.rubrum:326

Q5JFR1              	100.00%		F2SYZ7              	100.00%
Bootstrap support for Q5JFR1 as seed ortholog is 100%.
Bootstrap support for F2SYZ7 as seed ortholog is 100%.

Group of orthologs #28. Best score 325 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:325 T.rubrum:125

Q5JGN7              	100.00%		F2SIT7              	100.00%
Bootstrap support for Q5JGN7 as seed ortholog is 100%.
Bootstrap support for F2SIT7 as seed ortholog is 96%.

Group of orthologs #29. Best score 297 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:297 T.rubrum:297

Q5JFM1              	100.00%		F2SCL5              	100.00%
Bootstrap support for Q5JFM1 as seed ortholog is 100%.
Bootstrap support for F2SCL5 as seed ortholog is 100%.

Group of orthologs #30. Best score 292 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:292 T.rubrum:292

Q5JIF8              	100.00%		F2SGS7              	100.00%
Bootstrap support for Q5JIF8 as seed ortholog is 100%.
Bootstrap support for F2SGS7 as seed ortholog is 100%.

Group of orthologs #31. Best score 291 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:291 T.rubrum:217

Q5JEW3              	100.00%		F2SVJ8              	100.00%
Bootstrap support for Q5JEW3 as seed ortholog is 100%.
Bootstrap support for F2SVJ8 as seed ortholog is 100%.

Group of orthologs #32. Best score 289 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:289 T.rubrum:240

Q5JEP3              	100.00%		F2SZJ6              	100.00%
Bootstrap support for Q5JEP3 as seed ortholog is 100%.
Bootstrap support for F2SZJ6 as seed ortholog is 100%.

Group of orthologs #33. Best score 285 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:285 T.rubrum:285

Q5JGX6              	100.00%		F2SSG6              	100.00%
Bootstrap support for Q5JGX6 as seed ortholog is 100%.
Bootstrap support for F2SSG6 as seed ortholog is 100%.

Group of orthologs #34. Best score 284 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:284 T.rubrum:131

Q5JHC1              	100.00%		F2SQV4              	100.00%
Bootstrap support for Q5JHC1 as seed ortholog is 100%.
Bootstrap support for F2SQV4 as seed ortholog is 99%.

Group of orthologs #35. Best score 278 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:278 T.rubrum:103

Q5JE75              	100.00%		F2SNG0              	100.00%
Bootstrap support for Q5JE75 as seed ortholog is 100%.
Bootstrap support for F2SNG0 as seed ortholog is 98%.

Group of orthologs #36. Best score 278 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:278 T.rubrum:278

Q76I93              	100.00%		F2STM3              	100.00%
Bootstrap support for Q76I93 as seed ortholog is 100%.
Bootstrap support for F2STM3 as seed ortholog is 100%.

Group of orthologs #37. Best score 274 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:274 T.rubrum:171

Q5JF49              	100.00%		F2SGL1              	100.00%
Bootstrap support for Q5JF49 as seed ortholog is 100%.
Bootstrap support for F2SGL1 as seed ortholog is 100%.

Group of orthologs #38. Best score 270 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:270 T.rubrum:159

Q5JFK3              	100.00%		F2SIA2              	100.00%
Bootstrap support for Q5JFK3 as seed ortholog is 100%.
Bootstrap support for F2SIA2 as seed ortholog is 99%.

Group of orthologs #39. Best score 269 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:99 T.rubrum:269

Q5JHX4              	100.00%		F2T1B7              	100.00%
                    	       		F2SJG4              	11.28%
Bootstrap support for Q5JHX4 as seed ortholog is 99%.
Bootstrap support for F2T1B7 as seed ortholog is 100%.

Group of orthologs #40. Best score 268 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:268 T.rubrum:174

Q5JJE8              	100.00%		F2SND0              	100.00%
Bootstrap support for Q5JJE8 as seed ortholog is 100%.
Bootstrap support for F2SND0 as seed ortholog is 100%.

Group of orthologs #41. Best score 267 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:267 T.rubrum:211

Q5JFM0              	100.00%		F2SWC7              	100.00%
Bootstrap support for Q5JFM0 as seed ortholog is 100%.
Bootstrap support for F2SWC7 as seed ortholog is 100%.

Group of orthologs #42. Best score 265 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:265 T.rubrum:265

Q5JEY0              	100.00%		F2SNB4              	100.00%
Bootstrap support for Q5JEY0 as seed ortholog is 100%.
Bootstrap support for F2SNB4 as seed ortholog is 100%.

Group of orthologs #43. Best score 265 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:265 T.rubrum:265

Q5JIQ2              	100.00%		F2SXB0              	100.00%
Bootstrap support for Q5JIQ2 as seed ortholog is 100%.
Bootstrap support for F2SXB0 as seed ortholog is 100%.

Group of orthologs #44. Best score 261 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:167 T.rubrum:261

Q5JET4              	100.00%		F2SU81              	100.00%
                    	       		F2SRN2              	7.62%
Bootstrap support for Q5JET4 as seed ortholog is 99%.
Bootstrap support for F2SU81 as seed ortholog is 100%.

Group of orthologs #45. Best score 255 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:255 T.rubrum:12

Q5JFZ6              	100.00%		F2T0N9              	100.00%
                    	       		F2SYT9              	58.93%
Bootstrap support for Q5JFZ6 as seed ortholog is 100%.
Bootstrap support for F2T0N9 as seed ortholog is 39%.
Alternative seed ortholog is F2SET1 (12 bits away from this cluster)

Group of orthologs #46. Best score 245 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:245 T.rubrum:245

Q9HHC4              	100.00%		F2SK94              	100.00%
                    	       		F2SEK8              	8.47%
Bootstrap support for Q9HHC4 as seed ortholog is 100%.
Bootstrap support for F2SK94 as seed ortholog is 100%.

Group of orthologs #47. Best score 243 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:243 T.rubrum:243

Q5JIS8              	100.00%		F2SMY2              	100.00%
Bootstrap support for Q5JIS8 as seed ortholog is 100%.
Bootstrap support for F2SMY2 as seed ortholog is 100%.

Group of orthologs #48. Best score 242 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:242 T.rubrum:242

Q5JJ43              	100.00%		F2SNS6              	100.00%
Bootstrap support for Q5JJ43 as seed ortholog is 100%.
Bootstrap support for F2SNS6 as seed ortholog is 100%.

Group of orthologs #49. Best score 237 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:237 T.rubrum:237

Q5JIA4              	100.00%		F2SJT7              	100.00%
Bootstrap support for Q5JIA4 as seed ortholog is 100%.
Bootstrap support for F2SJT7 as seed ortholog is 100%.

Group of orthologs #50. Best score 237 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:237 T.rubrum:237

Q5JED2              	100.00%		F2T0V4              	100.00%
Bootstrap support for Q5JED2 as seed ortholog is 100%.
Bootstrap support for F2T0V4 as seed ortholog is 100%.

Group of orthologs #51. Best score 235 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:235 T.rubrum:235

Q5JHC6              	100.00%		F2SUN9              	100.00%
Bootstrap support for Q5JHC6 as seed ortholog is 100%.
Bootstrap support for F2SUN9 as seed ortholog is 100%.

Group of orthologs #52. Best score 235 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:235 T.rubrum:28

Q5JH16              	100.00%		F2SWT9              	100.00%
Bootstrap support for Q5JH16 as seed ortholog is 100%.
Bootstrap support for F2SWT9 as seed ortholog is 71%.
Alternative seed ortholog is F2SFE9 (28 bits away from this cluster)

Group of orthologs #53. Best score 231 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:231 T.rubrum:231

Q5JGK6              	100.00%		F2SND5              	100.00%
Bootstrap support for Q5JGK6 as seed ortholog is 100%.
Bootstrap support for F2SND5 as seed ortholog is 100%.

Group of orthologs #54. Best score 228 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:228 T.rubrum:24

Q5JFW3              	100.00%		F2SKC5              	100.00%
Bootstrap support for Q5JFW3 as seed ortholog is 100%.
Bootstrap support for F2SKC5 as seed ortholog is 70%.
Alternative seed ortholog is F2SQI2 (24 bits away from this cluster)

Group of orthologs #55. Best score 227 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:105 T.rubrum:227

Q5JDF6              	100.00%		F2SK91              	100.00%
Bootstrap support for Q5JDF6 as seed ortholog is 99%.
Bootstrap support for F2SK91 as seed ortholog is 100%.

Group of orthologs #56. Best score 226 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:226 T.rubrum:226

Q5JGN0              	100.00%		F2SHJ8              	100.00%
Bootstrap support for Q5JGN0 as seed ortholog is 100%.
Bootstrap support for F2SHJ8 as seed ortholog is 100%.

Group of orthologs #57. Best score 226 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:226 T.rubrum:226

Q9YGB3              	100.00%		F2SF13              	100.00%
Bootstrap support for Q9YGB3 as seed ortholog is 100%.
Bootstrap support for F2SF13 as seed ortholog is 100%.

Group of orthologs #58. Best score 225 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:225 T.rubrum:225

Q5JCY6              	100.00%		F2SM44              	100.00%
Bootstrap support for Q5JCY6 as seed ortholog is 100%.
Bootstrap support for F2SM44 as seed ortholog is 100%.

Group of orthologs #59. Best score 225 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:75 T.rubrum:225

Q5JGG2              	100.00%		F2SV10              	100.00%
Bootstrap support for Q5JGG2 as seed ortholog is 96%.
Bootstrap support for F2SV10 as seed ortholog is 100%.

Group of orthologs #60. Best score 223 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:109 T.rubrum:157

Q5JF43              	100.00%		F2SHF1              	100.00%
Bootstrap support for Q5JF43 as seed ortholog is 99%.
Bootstrap support for F2SHF1 as seed ortholog is 99%.

Group of orthologs #61. Best score 222 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:222 T.rubrum:222

Q76KA7              	100.00%		F2SBK0              	100.00%
Bootstrap support for Q76KA7 as seed ortholog is 100%.
Bootstrap support for F2SBK0 as seed ortholog is 100%.

Group of orthologs #62. Best score 222 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:222 T.rubrum:3

Q5JHP3              	100.00%		F2SPM8              	100.00%
Bootstrap support for Q5JHP3 as seed ortholog is 100%.
Bootstrap support for F2SPM8 as seed ortholog is 50%.
Alternative seed ortholog is F2SV78 (3 bits away from this cluster)

Group of orthologs #63. Best score 222 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:222 T.rubrum:222

Q5JJH1              	100.00%		F2SYZ3              	100.00%
Bootstrap support for Q5JJH1 as seed ortholog is 100%.
Bootstrap support for F2SYZ3 as seed ortholog is 100%.

Group of orthologs #64. Best score 221 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:77 T.rubrum:22

Q5JGC4              	100.00%		F2SKM6              	100.00%
Q5JEZ2              	7.38%		
Bootstrap support for Q5JGC4 as seed ortholog is 98%.
Bootstrap support for F2SKM6 as seed ortholog is 77%.

Group of orthologs #65. Best score 220 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:220 T.rubrum:220

Q5JF13              	100.00%		F2ST02              	100.00%
Bootstrap support for Q5JF13 as seed ortholog is 100%.
Bootstrap support for F2ST02 as seed ortholog is 100%.

Group of orthologs #66. Best score 220 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:134 T.rubrum:220

Q5JI16              	100.00%		F2SYF6              	100.00%
Bootstrap support for Q5JI16 as seed ortholog is 99%.
Bootstrap support for F2SYF6 as seed ortholog is 100%.

Group of orthologs #67. Best score 217 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:217 T.rubrum:96

Q52428              	100.00%		F2SEN6              	100.00%
                    	       		F2SVA9              	13.10%
Bootstrap support for Q52428 as seed ortholog is 100%.
Bootstrap support for F2SEN6 as seed ortholog is 98%.

Group of orthologs #68. Best score 215 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:215 T.rubrum:32

Q5JG59              	100.00%		F2SWI9              	100.00%
                    	       		F2SGQ1              	26.77%
                    	       		F2SCC2              	10.61%
                    	       		F2SSQ6              	10.26%
Bootstrap support for Q5JG59 as seed ortholog is 100%.
Bootstrap support for F2SWI9 as seed ortholog is 76%.

Group of orthologs #69. Best score 215 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:215 T.rubrum:215

Q5JH37              	100.00%		F2SKW5              	100.00%
Bootstrap support for Q5JH37 as seed ortholog is 100%.
Bootstrap support for F2SKW5 as seed ortholog is 100%.

Group of orthologs #70. Best score 215 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:215 T.rubrum:215

Q5JFT4              	100.00%		F2SYA1              	100.00%
Bootstrap support for Q5JFT4 as seed ortholog is 100%.
Bootstrap support for F2SYA1 as seed ortholog is 100%.

Group of orthologs #71. Best score 212 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:212 T.rubrum:144

Q5JD92              	100.00%		F2SC34              	100.00%
Bootstrap support for Q5JD92 as seed ortholog is 100%.
Bootstrap support for F2SC34 as seed ortholog is 99%.

Group of orthologs #72. Best score 212 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:212 T.rubrum:212

Q5JGF4              	100.00%		F2SQ81              	100.00%
Bootstrap support for Q5JGF4 as seed ortholog is 100%.
Bootstrap support for F2SQ81 as seed ortholog is 100%.

Group of orthologs #73. Best score 210 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:210 T.rubrum:41

Q5JGG6              	100.00%		F2SS96              	100.00%
Q5JEW1              	13.47%		
Bootstrap support for Q5JGG6 as seed ortholog is 100%.
Bootstrap support for F2SS96 as seed ortholog is 83%.

Group of orthologs #74. Best score 207 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:207 T.rubrum:207

Q5JDJ0              	100.00%		F2SLR2              	100.00%
Bootstrap support for Q5JDJ0 as seed ortholog is 100%.
Bootstrap support for F2SLR2 as seed ortholog is 100%.

Group of orthologs #75. Best score 203 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:203 T.rubrum:143

Q5JGQ7              	100.00%		F2SFT9              	100.00%
                    	       		F2SPT7              	31.30%
Bootstrap support for Q5JGQ7 as seed ortholog is 100%.
Bootstrap support for F2SFT9 as seed ortholog is 99%.

Group of orthologs #76. Best score 203 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:203 T.rubrum:11

Q5JFV8              	100.00%		F2STM1              	100.00%
Bootstrap support for Q5JFV8 as seed ortholog is 100%.
Bootstrap support for F2STM1 as seed ortholog is 55%.
Alternative seed ortholog is F2SZ44 (11 bits away from this cluster)

Group of orthologs #77. Best score 203 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:203 T.rubrum:203

Q5JFN1              	100.00%		F2SWR3              	100.00%
Bootstrap support for Q5JFN1 as seed ortholog is 100%.
Bootstrap support for F2SWR3 as seed ortholog is 100%.

Group of orthologs #78. Best score 200 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:200 T.rubrum:200

Q5JDV8              	100.00%		F2SQC6              	100.00%
Bootstrap support for Q5JDV8 as seed ortholog is 100%.
Bootstrap support for F2SQC6 as seed ortholog is 100%.

Group of orthologs #79. Best score 197 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:197 T.rubrum:197

Q76KA8              	100.00%		F2SWC4              	100.00%
Bootstrap support for Q76KA8 as seed ortholog is 100%.
Bootstrap support for F2SWC4 as seed ortholog is 100%.

Group of orthologs #80. Best score 195 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:195 T.rubrum:195

Q5JDE9              	100.00%		F2SQC7              	100.00%
Bootstrap support for Q5JDE9 as seed ortholog is 100%.
Bootstrap support for F2SQC7 as seed ortholog is 100%.

Group of orthologs #81. Best score 195 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:195 T.rubrum:195

Q5JFV5              	100.00%		F2SX31              	100.00%
Bootstrap support for Q5JFV5 as seed ortholog is 100%.
Bootstrap support for F2SX31 as seed ortholog is 100%.

Group of orthologs #82. Best score 195 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:195 T.rubrum:195

Q5JFE7              	100.00%		F2SY00              	100.00%
Bootstrap support for Q5JFE7 as seed ortholog is 100%.
Bootstrap support for F2SY00 as seed ortholog is 100%.

Group of orthologs #83. Best score 194 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:194 T.rubrum:194

Q5JIL7              	100.00%		F2SIM2              	100.00%
Bootstrap support for Q5JIL7 as seed ortholog is 100%.
Bootstrap support for F2SIM2 as seed ortholog is 100%.

Group of orthologs #84. Best score 193 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:91 T.rubrum:17

Q5JDD8              	100.00%		F2SLM8              	100.00%
Bootstrap support for Q5JDD8 as seed ortholog is 99%.
Bootstrap support for F2SLM8 as seed ortholog is 64%.
Alternative seed ortholog is F2SGJ4 (17 bits away from this cluster)

Group of orthologs #85. Best score 193 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:193 T.rubrum:193

Q5JFP1              	100.00%		F2SVR8              	100.00%
Bootstrap support for Q5JFP1 as seed ortholog is 100%.
Bootstrap support for F2SVR8 as seed ortholog is 100%.

Group of orthologs #86. Best score 192 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:192 T.rubrum:7

Q5JIU9              	100.00%		F2SN68              	100.00%
Bootstrap support for Q5JIU9 as seed ortholog is 100%.
Bootstrap support for F2SN68 as seed ortholog is 61%.
Alternative seed ortholog is F2SLU8 (7 bits away from this cluster)

Group of orthologs #87. Best score 190 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:190 T.rubrum:21

Q5JH48              	100.00%		F2ST28              	100.00%
                    	       		F2SIY0              	6.29%
Bootstrap support for Q5JH48 as seed ortholog is 100%.
Bootstrap support for F2ST28 as seed ortholog is 67%.
Alternative seed ortholog is F2SZ06 (21 bits away from this cluster)

Group of orthologs #88. Best score 190 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:190 T.rubrum:143

Q5JIK4              	100.00%		F2SY49              	100.00%
Bootstrap support for Q5JIK4 as seed ortholog is 100%.
Bootstrap support for F2SY49 as seed ortholog is 99%.

Group of orthologs #89. Best score 189 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:189 T.rubrum:90

Q5JDH2              	100.00%		F2SPN5              	100.00%
Bootstrap support for Q5JDH2 as seed ortholog is 100%.
Bootstrap support for F2SPN5 as seed ortholog is 99%.

Group of orthologs #90. Best score 188 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:188 T.rubrum:188

Q5JF74              	100.00%		F2SFW8              	100.00%
Bootstrap support for Q5JF74 as seed ortholog is 100%.
Bootstrap support for F2SFW8 as seed ortholog is 100%.

Group of orthologs #91. Best score 184 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:85 T.rubrum:184

Q5JGV6              	100.00%		F2SUD6              	100.00%
Bootstrap support for Q5JGV6 as seed ortholog is 90%.
Bootstrap support for F2SUD6 as seed ortholog is 100%.

Group of orthologs #92. Best score 183 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:183 T.rubrum:111

Q5JEQ6              	100.00%		F2SDQ6              	100.00%
Q5JJB8              	19.03%		
Bootstrap support for Q5JEQ6 as seed ortholog is 100%.
Bootstrap support for F2SDQ6 as seed ortholog is 99%.

Group of orthologs #93. Best score 183 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:183 T.rubrum:183

Q5JIE6              	100.00%		F2SXX6              	100.00%
                    	       		F2SXX4              	43.86%
Bootstrap support for Q5JIE6 as seed ortholog is 100%.
Bootstrap support for F2SXX6 as seed ortholog is 100%.

Group of orthologs #94. Best score 181 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:181 T.rubrum:181

Q5JF06              	100.00%		F2SEC6              	100.00%
                    	       		F2SCV9              	53.29%
Bootstrap support for Q5JF06 as seed ortholog is 100%.
Bootstrap support for F2SEC6 as seed ortholog is 100%.

Group of orthologs #95. Best score 181 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:181 T.rubrum:181

P77933              	100.00%		F2SRU9              	100.00%
Bootstrap support for P77933 as seed ortholog is 100%.
Bootstrap support for F2SRU9 as seed ortholog is 100%.

Group of orthologs #96. Best score 178 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:178 T.rubrum:84

Q5JFN0              	100.00%		F2SE60              	100.00%
                    	       		F2SEA3              	16.63%
Bootstrap support for Q5JFN0 as seed ortholog is 100%.
Bootstrap support for F2SE60 as seed ortholog is 99%.

Group of orthologs #97. Best score 177 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:177 T.rubrum:75

Q5JF51              	100.00%		F2SX98              	100.00%
Q5JHU0              	28.33%		
Q5JE21              	11.83%		
Bootstrap support for Q5JF51 as seed ortholog is 100%.
Bootstrap support for F2SX98 as seed ortholog is 96%.

Group of orthologs #98. Best score 177 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:177 T.rubrum:177

Q5JIG7              	100.00%		F2SRN7              	100.00%
Bootstrap support for Q5JIG7 as seed ortholog is 100%.
Bootstrap support for F2SRN7 as seed ortholog is 100%.

Group of orthologs #99. Best score 177 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:177 T.rubrum:177

Q5JH24              	100.00%		F2T054              	100.00%
Bootstrap support for Q5JH24 as seed ortholog is 100%.
Bootstrap support for F2T054 as seed ortholog is 100%.

Group of orthologs #100. Best score 174 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:174 T.rubrum:174

Q5JGH7              	100.00%		F2SLC7              	100.00%
                    	       		F2SGA4              	26.84%
Bootstrap support for Q5JGH7 as seed ortholog is 100%.
Bootstrap support for F2SLC7 as seed ortholog is 100%.

Group of orthologs #101. Best score 174 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:174 T.rubrum:129

Q5JGS4              	100.00%		F2T0V7              	100.00%
Q5JCX7              	5.00%		
Bootstrap support for Q5JGS4 as seed ortholog is 100%.
Bootstrap support for F2T0V7 as seed ortholog is 99%.

Group of orthologs #102. Best score 173 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:173 T.rubrum:101

Q5JF38              	100.00%		F2SSE0              	100.00%
Bootstrap support for Q5JF38 as seed ortholog is 100%.
Bootstrap support for F2SSE0 as seed ortholog is 99%.

Group of orthologs #103. Best score 173 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:173 T.rubrum:173

Q5JH43              	100.00%		F2STK3              	100.00%
Bootstrap support for Q5JH43 as seed ortholog is 100%.
Bootstrap support for F2STK3 as seed ortholog is 100%.

Group of orthologs #104. Best score 172 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:172 T.rubrum:172

Q5JE24              	100.00%		F2SZF7              	100.00%
Q6F598              	5.94%		F2SEP2              	39.30%
Bootstrap support for Q5JE24 as seed ortholog is 100%.
Bootstrap support for F2SZF7 as seed ortholog is 100%.

Group of orthologs #105. Best score 171 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:171 T.rubrum:171

Q5JH96              	100.00%		F2SY13              	100.00%
Bootstrap support for Q5JH96 as seed ortholog is 100%.
Bootstrap support for F2SY13 as seed ortholog is 100%.

Group of orthologs #106. Best score 169 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:169 T.rubrum:169

Q5JJF3              	100.00%		F2SCI0              	100.00%
Bootstrap support for Q5JJF3 as seed ortholog is 100%.
Bootstrap support for F2SCI0 as seed ortholog is 100%.

Group of orthologs #107. Best score 168 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:168 T.rubrum:168

Q5JGE1              	100.00%		F2SXE7              	100.00%
Bootstrap support for Q5JGE1 as seed ortholog is 100%.
Bootstrap support for F2SXE7 as seed ortholog is 100%.

Group of orthologs #108. Best score 167 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:167 T.rubrum:97

Q5JGD1              	100.00%		F2SNT2              	100.00%
                    	       		F2SY67              	36.32%
Bootstrap support for Q5JGD1 as seed ortholog is 100%.
Bootstrap support for F2SNT2 as seed ortholog is 99%.

Group of orthologs #109. Best score 166 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:166 T.rubrum:166

Q5JIB3              	100.00%		F2T139              	100.00%
Bootstrap support for Q5JIB3 as seed ortholog is 100%.
Bootstrap support for F2T139 as seed ortholog is 100%.

Group of orthologs #110. Best score 165 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:165 T.rubrum:165

Q5JFV6              	100.00%		F2SVJ7              	100.00%
Bootstrap support for Q5JFV6 as seed ortholog is 100%.
Bootstrap support for F2SVJ7 as seed ortholog is 100%.

Group of orthologs #111. Best score 164 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:164 T.rubrum:46

Q5JE76              	100.00%		F2SEC2              	100.00%
Bootstrap support for Q5JE76 as seed ortholog is 100%.
Bootstrap support for F2SEC2 as seed ortholog is 90%.

Group of orthologs #112. Best score 164 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:164 T.rubrum:164

Q5JE20              	100.00%		F2SL98              	100.00%
Bootstrap support for Q5JE20 as seed ortholog is 100%.
Bootstrap support for F2SL98 as seed ortholog is 100%.

Group of orthologs #113. Best score 164 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:164 T.rubrum:51

Q5JJ82              	100.00%		F2SX55              	100.00%
Bootstrap support for Q5JJ82 as seed ortholog is 100%.
Bootstrap support for F2SX55 as seed ortholog is 88%.

Group of orthologs #114. Best score 163 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:163 T.rubrum:114

Q5JJD2              	100.00%		F2SEB1              	100.00%
Bootstrap support for Q5JJD2 as seed ortholog is 100%.
Bootstrap support for F2SEB1 as seed ortholog is 99%.

Group of orthologs #115. Best score 161 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:161 T.rubrum:161

Q5JDJ5              	100.00%		F2SJT8              	100.00%
Bootstrap support for Q5JDJ5 as seed ortholog is 100%.
Bootstrap support for F2SJT8 as seed ortholog is 100%.

Group of orthologs #116. Best score 160 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:160 T.rubrum:81

Q5JFX8              	100.00%		F2SJ90              	100.00%
Bootstrap support for Q5JFX8 as seed ortholog is 100%.
Bootstrap support for F2SJ90 as seed ortholog is 88%.

Group of orthologs #117. Best score 160 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:160 T.rubrum:4

Q5JEP5              	100.00%		F2T0N7              	100.00%
Bootstrap support for Q5JEP5 as seed ortholog is 100%.
Bootstrap support for F2T0N7 as seed ortholog is 53%.
Alternative seed ortholog is F2SHD1 (4 bits away from this cluster)

Group of orthologs #118. Best score 159 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:159 T.rubrum:159

Q5JFG9              	100.00%		F2SC27              	100.00%
Bootstrap support for Q5JFG9 as seed ortholog is 100%.
Bootstrap support for F2SC27 as seed ortholog is 100%.

Group of orthologs #119. Best score 158 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:158 T.rubrum:158

Q5JIM2              	100.00%		F2SY60              	100.00%
Bootstrap support for Q5JIM2 as seed ortholog is 100%.
Bootstrap support for F2SY60 as seed ortholog is 100%.

Group of orthologs #120. Best score 157 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:157 T.rubrum:157

Q5JEZ9              	100.00%		F2SVA7              	100.00%
                    	       		F2SF91              	5.29%
Bootstrap support for Q5JEZ9 as seed ortholog is 100%.
Bootstrap support for F2SVA7 as seed ortholog is 100%.

Group of orthologs #121. Best score 157 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:157 T.rubrum:157

Q877I0              	100.00%		F2SHA2              	100.00%
Bootstrap support for Q877I0 as seed ortholog is 100%.
Bootstrap support for F2SHA2 as seed ortholog is 100%.

Group of orthologs #122. Best score 157 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:157 T.rubrum:157

Q5JJG8              	100.00%		F2STR8              	100.00%
Bootstrap support for Q5JJG8 as seed ortholog is 100%.
Bootstrap support for F2STR8 as seed ortholog is 100%.

Group of orthologs #123. Best score 153 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:153 T.rubrum:153

Q5JJG1              	100.00%		F2SGS5              	100.00%
Bootstrap support for Q5JJG1 as seed ortholog is 100%.
Bootstrap support for F2SGS5 as seed ortholog is 100%.

Group of orthologs #124. Best score 152 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:152 T.rubrum:26

Q5JH68              	100.00%		F2SU25              	100.00%
Bootstrap support for Q5JH68 as seed ortholog is 100%.
Bootstrap support for F2SU25 as seed ortholog is 81%.

Group of orthologs #125. Best score 151 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:151 T.rubrum:65

O08467              	100.00%		F2SBR3              	100.00%
Bootstrap support for O08467 as seed ortholog is 100%.
Bootstrap support for F2SBR3 as seed ortholog is 91%.

Group of orthologs #126. Best score 151 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:151 T.rubrum:151

Q5JJG0              	100.00%		F2SGZ6              	100.00%
Bootstrap support for Q5JJG0 as seed ortholog is 100%.
Bootstrap support for F2SGZ6 as seed ortholog is 100%.

Group of orthologs #127. Best score 151 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:151 T.rubrum:151

Q5JDI0              	100.00%		F2SNJ7              	100.00%
Bootstrap support for Q5JDI0 as seed ortholog is 100%.
Bootstrap support for F2SNJ7 as seed ortholog is 100%.

Group of orthologs #128. Best score 149 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:149 T.rubrum:149

O59650              	100.00%		F2SNS1              	100.00%
Bootstrap support for O59650 as seed ortholog is 100%.
Bootstrap support for F2SNS1 as seed ortholog is 100%.

Group of orthologs #129. Best score 148 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:148 T.rubrum:148

Q5JFN2              	100.00%		F2SU43              	100.00%
Bootstrap support for Q5JFN2 as seed ortholog is 100%.
Bootstrap support for F2SU43 as seed ortholog is 100%.

Group of orthologs #130. Best score 148 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:148 T.rubrum:148

Q5JE04              	100.00%		F2SWW9              	100.00%
Bootstrap support for Q5JE04 as seed ortholog is 100%.
Bootstrap support for F2SWW9 as seed ortholog is 100%.

Group of orthologs #131. Best score 148 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:148 T.rubrum:148

Q5JGJ4              	100.00%		F2SUX9              	100.00%
Bootstrap support for Q5JGJ4 as seed ortholog is 100%.
Bootstrap support for F2SUX9 as seed ortholog is 100%.

Group of orthologs #132. Best score 147 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:147 T.rubrum:147

Q5JI54              	100.00%		F2SJQ4              	100.00%
Bootstrap support for Q5JI54 as seed ortholog is 100%.
Bootstrap support for F2SJQ4 as seed ortholog is 100%.

Group of orthologs #133. Best score 147 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:147 T.rubrum:81

Q5JFK1              	100.00%		F2SYN4              	100.00%
Bootstrap support for Q5JFK1 as seed ortholog is 100%.
Bootstrap support for F2SYN4 as seed ortholog is 96%.

Group of orthologs #134. Best score 146 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:146 T.rubrum:19

Q5JFM8              	100.00%		F2SQ62              	100.00%
                    	       		F2SDJ7              	19.85%
Bootstrap support for Q5JFM8 as seed ortholog is 100%.
Bootstrap support for F2SQ62 as seed ortholog is 62%.
Alternative seed ortholog is F2SZQ2 (19 bits away from this cluster)

Group of orthologs #135. Best score 146 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:146 T.rubrum:12

Q5JI69              	100.00%		F2SU48              	100.00%
                    	       		F2SWQ0              	7.88%
Bootstrap support for Q5JI69 as seed ortholog is 100%.
Bootstrap support for F2SU48 as seed ortholog is 63%.
Alternative seed ortholog is F2STK1 (12 bits away from this cluster)

Group of orthologs #136. Best score 146 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:146 T.rubrum:40

Q5JG47              	100.00%		F2SM50              	100.00%
Bootstrap support for Q5JG47 as seed ortholog is 100%.
Bootstrap support for F2SM50 as seed ortholog is 81%.

Group of orthologs #137. Best score 144 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:144 T.rubrum:144

Q5JGM9              	100.00%		F2SHZ1              	100.00%
Q5JF26              	21.71%		
Bootstrap support for Q5JGM9 as seed ortholog is 100%.
Bootstrap support for F2SHZ1 as seed ortholog is 100%.

Group of orthologs #138. Best score 144 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:144 T.rubrum:144

Q5JIW4              	100.00%		F2SZ19              	100.00%
Q5JI77              	8.37%		
Bootstrap support for Q5JIW4 as seed ortholog is 100%.
Bootstrap support for F2SZ19 as seed ortholog is 100%.

Group of orthologs #139. Best score 144 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:144 T.rubrum:144

Q5JGR7              	100.00%		F2SNP8              	100.00%
Bootstrap support for Q5JGR7 as seed ortholog is 100%.
Bootstrap support for F2SNP8 as seed ortholog is 100%.

Group of orthologs #140. Best score 141 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:141 T.rubrum:141

Q5JJG6              	100.00%		F2SD20              	100.00%
Bootstrap support for Q5JJG6 as seed ortholog is 100%.
Bootstrap support for F2SD20 as seed ortholog is 100%.

Group of orthologs #141. Best score 139 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:139 T.rubrum:139

Q5JGN1              	100.00%		F2SF70              	100.00%
P58109              	60.85%		
Bootstrap support for Q5JGN1 as seed ortholog is 100%.
Bootstrap support for F2SF70 as seed ortholog is 100%.

Group of orthologs #142. Best score 139 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:139 T.rubrum:139

Q5JD25              	100.00%		F2SKX8              	100.00%
Bootstrap support for Q5JD25 as seed ortholog is 100%.
Bootstrap support for F2SKX8 as seed ortholog is 100%.

Group of orthologs #143. Best score 138 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:138 T.rubrum:138

Q5JDV1              	100.00%		F2SQ73              	100.00%
Bootstrap support for Q5JDV1 as seed ortholog is 100%.
Bootstrap support for F2SQ73 as seed ortholog is 100%.

Group of orthologs #144. Best score 137 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:137 T.rubrum:137

Q5JDI4              	100.00%		F2SLC4              	100.00%
Bootstrap support for Q5JDI4 as seed ortholog is 100%.
Bootstrap support for F2SLC4 as seed ortholog is 100%.

Group of orthologs #145. Best score 137 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:137 T.rubrum:66

Q5JIR7              	100.00%		F2SK42              	100.00%
Bootstrap support for Q5JIR7 as seed ortholog is 100%.
Bootstrap support for F2SK42 as seed ortholog is 99%.

Group of orthologs #146. Best score 136 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:136 T.rubrum:136

Q5JIF4              	100.00%		F2SE96              	100.00%
Bootstrap support for Q5JIF4 as seed ortholog is 100%.
Bootstrap support for F2SE96 as seed ortholog is 100%.

Group of orthologs #147. Best score 134 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:134 T.rubrum:134

Q5JGZ7              	100.00%		F2SQN3              	100.00%
Bootstrap support for Q5JGZ7 as seed ortholog is 100%.
Bootstrap support for F2SQN3 as seed ortholog is 100%.

Group of orthologs #148. Best score 133 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:133 T.rubrum:133

Q5JDH5              	100.00%		F2SBK1              	100.00%
Bootstrap support for Q5JDH5 as seed ortholog is 100%.
Bootstrap support for F2SBK1 as seed ortholog is 100%.

Group of orthologs #149. Best score 133 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:133 T.rubrum:133

Q5JFU6              	100.00%		F2SXZ8              	100.00%
Bootstrap support for Q5JFU6 as seed ortholog is 100%.
Bootstrap support for F2SXZ8 as seed ortholog is 100%.

Group of orthologs #150. Best score 132 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:132 T.rubrum:132

Q5JE94              	100.00%		F2SJE5              	100.00%
Bootstrap support for Q5JE94 as seed ortholog is 100%.
Bootstrap support for F2SJE5 as seed ortholog is 100%.

Group of orthologs #151. Best score 130 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:130 T.rubrum:130

Q5JDH3              	100.00%		F2SIW9              	100.00%
Bootstrap support for Q5JDH3 as seed ortholog is 100%.
Bootstrap support for F2SIW9 as seed ortholog is 100%.

Group of orthologs #152. Best score 130 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:130 T.rubrum:130

Q5JFR0              	100.00%		F2SHU1              	100.00%
Bootstrap support for Q5JFR0 as seed ortholog is 100%.
Bootstrap support for F2SHU1 as seed ortholog is 100%.

Group of orthologs #153. Best score 129 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:129 T.rubrum:129

Q5JD52              	100.00%		F2SMH6              	100.00%
Bootstrap support for Q5JD52 as seed ortholog is 100%.
Bootstrap support for F2SMH6 as seed ortholog is 100%.

Group of orthologs #154. Best score 129 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:129 T.rubrum:44

Q5JJB1              	100.00%		F2SKM5              	100.00%
Bootstrap support for Q5JJB1 as seed ortholog is 100%.
Bootstrap support for F2SKM5 as seed ortholog is 88%.

Group of orthologs #155. Best score 128 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:128 T.rubrum:128

Q5JDE4              	100.00%		F2SIQ8              	100.00%
Bootstrap support for Q5JDE4 as seed ortholog is 100%.
Bootstrap support for F2SIQ8 as seed ortholog is 100%.

Group of orthologs #156. Best score 128 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:128 T.rubrum:128

Q5JDG3              	100.00%		F2SZF1              	100.00%
Bootstrap support for Q5JDG3 as seed ortholog is 100%.
Bootstrap support for F2SZF1 as seed ortholog is 100%.

Group of orthologs #157. Best score 128 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:128 T.rubrum:128

Q5JJF1              	100.00%		F2T0B4              	100.00%
Bootstrap support for Q5JJF1 as seed ortholog is 100%.
Bootstrap support for F2T0B4 as seed ortholog is 100%.

Group of orthologs #158. Best score 127 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:18 T.rubrum:127

Q5JES4              	100.00%		F2SF43              	100.00%
Bootstrap support for Q5JES4 as seed ortholog is 70%.
Alternative seed ortholog is Q5JJ47 (18 bits away from this cluster)
Bootstrap support for F2SF43 as seed ortholog is 100%.

Group of orthologs #159. Best score 127 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:127 T.rubrum:127

Q5JJG3              	100.00%		F2SZX0              	100.00%
Bootstrap support for Q5JJG3 as seed ortholog is 100%.
Bootstrap support for F2SZX0 as seed ortholog is 100%.

Group of orthologs #160. Best score 126 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:126 T.rubrum:80

Q5JF69              	100.00%		F2SQT8              	100.00%
                    	       		F2SKF6              	36.17%
                    	       		F2T1C4              	36.05%
                    	       		F2SFI7              	30.08%
                    	       		F2SCN7              	25.95%
                    	       		F2SZ31              	25.41%
                    	       		F2T1A4              	24.36%
                    	       		F2SST6              	16.15%
                    	       		F2SMZ6              	12.14%
Bootstrap support for Q5JF69 as seed ortholog is 100%.
Bootstrap support for F2SQT8 as seed ortholog is 99%.

Group of orthologs #161. Best score 126 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:126 T.rubrum:126

O52958              	100.00%		F2SEA6              	100.00%
                    	       		F2SX86              	24.44%
                    	       		F2SM10              	22.32%
Bootstrap support for O52958 as seed ortholog is 100%.
Bootstrap support for F2SEA6 as seed ortholog is 100%.

Group of orthologs #162. Best score 126 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:126 T.rubrum:126

Q5JFU8              	100.00%		F2SNZ6              	100.00%
Bootstrap support for Q5JFU8 as seed ortholog is 100%.
Bootstrap support for F2SNZ6 as seed ortholog is 100%.

Group of orthologs #163. Best score 126 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:126 T.rubrum:126

Q5JER7              	100.00%		F2SWS7              	100.00%
Bootstrap support for Q5JER7 as seed ortholog is 100%.
Bootstrap support for F2SWS7 as seed ortholog is 100%.

Group of orthologs #164. Best score 126 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:56 T.rubrum:126

Q5JI97              	100.00%		F2SXH4              	100.00%
Bootstrap support for Q5JI97 as seed ortholog is 95%.
Bootstrap support for F2SXH4 as seed ortholog is 100%.

Group of orthologs #165. Best score 125 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:125 T.rubrum:69

Q5JET7              	100.00%		F2SKC2              	100.00%
Bootstrap support for Q5JET7 as seed ortholog is 100%.
Bootstrap support for F2SKC2 as seed ortholog is 95%.

Group of orthologs #166. Best score 124 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:53 T.rubrum:3

Q5JIX4              	100.00%		F2SBR2              	100.00%
                    	       		F2SQR6              	5.18%
Bootstrap support for Q5JIX4 as seed ortholog is 91%.
Bootstrap support for F2SBR2 as seed ortholog is 52%.
Alternative seed ortholog is F2SZ26 (3 bits away from this cluster)

Group of orthologs #167. Best score 124 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:124 T.rubrum:124

Q5JHP2              	100.00%		F2SL24              	100.00%
Bootstrap support for Q5JHP2 as seed ortholog is 100%.
Bootstrap support for F2SL24 as seed ortholog is 100%.

Group of orthologs #168. Best score 124 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:69 T.rubrum:124

Q5JHS7              	100.00%		F2SV69              	100.00%
Bootstrap support for Q5JHS7 as seed ortholog is 97%.
Bootstrap support for F2SV69 as seed ortholog is 100%.

Group of orthologs #169. Best score 123 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:5 T.rubrum:123

P58502              	100.00%		F2SLX7              	100.00%
                    	       		F2ST98              	54.23%
                    	       		F2SM94              	37.32%
                    	       		F2SK47              	36.76%
                    	       		F2SH33              	34.79%
                    	       		F2T063              	34.23%
                    	       		F2SZN8              	30.70%
                    	       		F2SIM7              	27.89%
                    	       		F2STD7              	27.89%
                    	       		F2SN26              	19.30%
                    	       		F2SIX4              	19.01%
                    	       		F2T0C0              	11.55%
Bootstrap support for P58502 as seed ortholog is 55%.
Alternative seed ortholog is Q5JEH9 (5 bits away from this cluster)
Bootstrap support for F2SLX7 as seed ortholog is 100%.

Group of orthologs #170. Best score 123 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:55 T.rubrum:123

Q5JGT2              	100.00%		F2T079              	100.00%
Q5JI45              	38.73%		
Bootstrap support for Q5JGT2 as seed ortholog is 89%.
Bootstrap support for F2T079 as seed ortholog is 100%.

Group of orthologs #171. Best score 123 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:123 T.rubrum:123

Q5JJ45              	100.00%		F2T0Q8              	100.00%
Bootstrap support for Q5JJ45 as seed ortholog is 100%.
Bootstrap support for F2T0Q8 as seed ortholog is 100%.

Group of orthologs #172. Best score 122 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:122 T.rubrum:122

Q5JDR5              	100.00%		F2SCM2              	100.00%
                    	       		F2SNA0              	23.70%
                    	       		F2SRB9              	23.00%
Bootstrap support for Q5JDR5 as seed ortholog is 100%.
Bootstrap support for F2SCM2 as seed ortholog is 100%.

Group of orthologs #173. Best score 122 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:122 T.rubrum:122

Q5JJC6              	100.00%		F2SGS0              	100.00%
Bootstrap support for Q5JJC6 as seed ortholog is 100%.
Bootstrap support for F2SGS0 as seed ortholog is 100%.

Group of orthologs #174. Best score 119 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:119 T.rubrum:119

Q5JF30              	100.00%		F2SSQ0              	100.00%
Bootstrap support for Q5JF30 as seed ortholog is 100%.
Bootstrap support for F2SSQ0 as seed ortholog is 100%.

Group of orthologs #175. Best score 117 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:117 T.rubrum:117

Q5JGT4              	100.00%		F2T1B1              	100.00%
Bootstrap support for Q5JGT4 as seed ortholog is 100%.
Bootstrap support for F2T1B1 as seed ortholog is 100%.

Group of orthologs #176. Best score 116 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:116 T.rubrum:116

Q5JFR2              	100.00%		F2SK70              	100.00%
Bootstrap support for Q5JFR2 as seed ortholog is 100%.
Bootstrap support for F2SK70 as seed ortholog is 100%.

Group of orthologs #177. Best score 116 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:116 T.rubrum:68

Q5JF63              	100.00%		F2SME1              	100.00%
Bootstrap support for Q5JF63 as seed ortholog is 100%.
Bootstrap support for F2SME1 as seed ortholog is 94%.

Group of orthologs #178. Best score 116 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:116 T.rubrum:116

Q5JEW5              	100.00%		F2SQ46              	100.00%
Bootstrap support for Q5JEW5 as seed ortholog is 100%.
Bootstrap support for F2SQ46 as seed ortholog is 100%.

Group of orthologs #179. Best score 116 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:116 T.rubrum:116

Q5JJG4              	100.00%		F2SLI2              	100.00%
Bootstrap support for Q5JJG4 as seed ortholog is 100%.
Bootstrap support for F2SLI2 as seed ortholog is 100%.

Group of orthologs #180. Best score 115 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:115 T.rubrum:53

Q5JJF2              	100.00%		F2SGW9              	100.00%
Bootstrap support for Q5JJF2 as seed ortholog is 100%.
Bootstrap support for F2SGW9 as seed ortholog is 98%.

Group of orthologs #181. Best score 114 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:114 T.rubrum:114

Q5JGG0              	100.00%		F2SNY9              	100.00%
                    	       		F2SM17              	15.91%
Bootstrap support for Q5JGG0 as seed ortholog is 100%.
Bootstrap support for F2SNY9 as seed ortholog is 100%.

Group of orthologs #182. Best score 114 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:114 T.rubrum:114

Q5JIA2              	100.00%		F2SNT5              	100.00%
Bootstrap support for Q5JIA2 as seed ortholog is 100%.
Bootstrap support for F2SNT5 as seed ortholog is 100%.

Group of orthologs #183. Best score 113 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:113 T.rubrum:113

Q5JJ50              	100.00%		F2SJ10              	100.00%
Bootstrap support for Q5JJ50 as seed ortholog is 100%.
Bootstrap support for F2SJ10 as seed ortholog is 100%.

Group of orthologs #184. Best score 113 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:113 T.rubrum:113

Q5JJG7              	100.00%		F2SP81              	100.00%
Bootstrap support for Q5JJG7 as seed ortholog is 100%.
Bootstrap support for F2SP81 as seed ortholog is 100%.

Group of orthologs #185. Best score 112 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:112 T.rubrum:112

Q5JFJ9              	100.00%		F2SRG7              	100.00%
Bootstrap support for Q5JFJ9 as seed ortholog is 100%.
Bootstrap support for F2SRG7 as seed ortholog is 100%.

Group of orthologs #186. Best score 112 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:112 T.rubrum:13

Q5JHN1              	100.00%		F2SY91              	100.00%
Bootstrap support for Q5JHN1 as seed ortholog is 100%.
Bootstrap support for F2SY91 as seed ortholog is 95%.

Group of orthologs #187. Best score 111 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:111 T.rubrum:111

Q5JEX8              	100.00%		F2SG28              	100.00%
                    	       		F2SNE7              	38.60%
Bootstrap support for Q5JEX8 as seed ortholog is 100%.
Bootstrap support for F2SG28 as seed ortholog is 100%.

Group of orthologs #188. Best score 111 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:111 T.rubrum:111

Q5JD35              	100.00%		F2SES9              	100.00%
Bootstrap support for Q5JD35 as seed ortholog is 100%.
Bootstrap support for F2SES9 as seed ortholog is 100%.

Group of orthologs #189. Best score 111 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:111 T.rubrum:111

Q5JGC7              	100.00%		F2SMF6              	100.00%
Bootstrap support for Q5JGC7 as seed ortholog is 100%.
Bootstrap support for F2SMF6 as seed ortholog is 100%.

Group of orthologs #190. Best score 111 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:111 T.rubrum:2

Q5JHT1              	100.00%		F2SLX5              	100.00%
Bootstrap support for Q5JHT1 as seed ortholog is 100%.
Bootstrap support for F2SLX5 as seed ortholog is 85%.

Group of orthologs #191. Best score 111 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:111 T.rubrum:34

Q5JIB6              	100.00%		F2SM46              	100.00%
Bootstrap support for Q5JIB6 as seed ortholog is 100%.
Bootstrap support for F2SM46 as seed ortholog is 83%.

Group of orthologs #192. Best score 110 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:110 T.rubrum:110

Q5JIQ1              	100.00%		F2SJT5              	100.00%
Bootstrap support for Q5JIQ1 as seed ortholog is 100%.
Bootstrap support for F2SJT5 as seed ortholog is 100%.

Group of orthologs #193. Best score 110 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:110 T.rubrum:49

Q5JJF8              	100.00%		F2SWA5              	100.00%
Bootstrap support for Q5JJF8 as seed ortholog is 100%.
Bootstrap support for F2SWA5 as seed ortholog is 98%.

Group of orthologs #194. Best score 109 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:109 T.rubrum:109

Q5JHF7              	100.00%		F2SR97              	100.00%
Q5JE68              	37.28%		
Bootstrap support for Q5JHF7 as seed ortholog is 100%.
Bootstrap support for F2SR97 as seed ortholog is 100%.

Group of orthologs #195. Best score 109 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:109 T.rubrum:109

Q5JE49              	100.00%		F2SC00              	100.00%
Bootstrap support for Q5JE49 as seed ortholog is 100%.
Bootstrap support for F2SC00 as seed ortholog is 100%.

Group of orthologs #196. Best score 109 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:109 T.rubrum:109

Q5JFL7              	100.00%		F2SZB4              	100.00%
Bootstrap support for Q5JFL7 as seed ortholog is 100%.
Bootstrap support for F2SZB4 as seed ortholog is 100%.

Group of orthologs #197. Best score 109 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:109 T.rubrum:109

Q5JH26              	100.00%		F2T0G5              	100.00%
Bootstrap support for Q5JH26 as seed ortholog is 100%.
Bootstrap support for F2T0G5 as seed ortholog is 100%.

Group of orthologs #198. Best score 108 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:108 T.rubrum:57

Q5JJ05              	100.00%		F2SQY7              	100.00%
Q5JIE4              	6.67%		
Bootstrap support for Q5JJ05 as seed ortholog is 100%.
Bootstrap support for F2SQY7 as seed ortholog is 93%.

Group of orthologs #199. Best score 107 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:107 T.rubrum:107

Q5JDI6              	100.00%		F2SJU3              	100.00%
Bootstrap support for Q5JDI6 as seed ortholog is 100%.
Bootstrap support for F2SJU3 as seed ortholog is 100%.

Group of orthologs #200. Best score 107 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:107 T.rubrum:24

Q5JFS0              	100.00%		F2SQT1              	100.00%
Bootstrap support for Q5JFS0 as seed ortholog is 100%.
Bootstrap support for F2SQT1 as seed ortholog is 71%.
Alternative seed ortholog is F2SVY6 (24 bits away from this cluster)

Group of orthologs #201. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 T.rubrum:106

Q5JGC8              	100.00%		F2SEP8              	100.00%
                    	       		F2SZT2              	16.53%
Bootstrap support for Q5JGC8 as seed ortholog is 100%.
Bootstrap support for F2SEP8 as seed ortholog is 100%.

Group of orthologs #202. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 T.rubrum:106

Q5JIB9              	100.00%		F2SUT5              	100.00%
Bootstrap support for Q5JIB9 as seed ortholog is 100%.
Bootstrap support for F2SUT5 as seed ortholog is 100%.

Group of orthologs #203. Best score 104 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:104 T.rubrum:43

Q5JI09              	100.00%		F2SXR0              	100.00%
                    	       		F2SN66              	28.74%
                    	       		F2SJD2              	20.97%
                    	       		F2SG92              	19.03%
                    	       		F2SGE2              	17.86%
                    	       		F2STH2              	14.95%
                    	       		F2SUT8              	11.84%
                    	       		F2SU06              	8.93%
Bootstrap support for Q5JI09 as seed ortholog is 100%.
Bootstrap support for F2SXR0 as seed ortholog is 88%.

Group of orthologs #204. Best score 104 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:104 T.rubrum:104

Q5JDQ6              	100.00%		F2SZ90              	100.00%
                    	       		F2SJ17              	28.41%
Bootstrap support for Q5JDQ6 as seed ortholog is 100%.
Bootstrap support for F2SZ90 as seed ortholog is 100%.

Group of orthologs #205. Best score 104 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:104 T.rubrum:104

Q5JJF9              	100.00%		F2SCD3              	100.00%
Bootstrap support for Q5JJF9 as seed ortholog is 100%.
Bootstrap support for F2SCD3 as seed ortholog is 100%.

Group of orthologs #206. Best score 104 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:104 T.rubrum:56

Q5JH35              	100.00%		F2SZL7              	100.00%
Bootstrap support for Q5JH35 as seed ortholog is 100%.
Bootstrap support for F2SZL7 as seed ortholog is 97%.

Group of orthologs #207. Best score 103 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:103 T.rubrum:20

Q5JDJ9              	100.00%		F2SKX5              	100.00%
Q5JHL8              	23.10%		
Bootstrap support for Q5JDJ9 as seed ortholog is 100%.
Bootstrap support for F2SKX5 as seed ortholog is 81%.

Group of orthologs #208. Best score 103 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:103 T.rubrum:103

Q5JJE2              	100.00%		F2SCH8              	100.00%
Bootstrap support for Q5JJE2 as seed ortholog is 100%.
Bootstrap support for F2SCH8 as seed ortholog is 100%.

Group of orthologs #209. Best score 102 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:102 T.rubrum:102

Q5JGK8              	100.00%		F2SCF9              	100.00%
                    	       		F2SBX8              	13.84%
                    	       		F2SYM0              	12.09%
Bootstrap support for Q5JGK8 as seed ortholog is 100%.
Bootstrap support for F2SCF9 as seed ortholog is 100%.

Group of orthologs #210. Best score 102 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:102 T.rubrum:42

Q5JJ91              	100.00%		F2SEE2              	100.00%
Bootstrap support for Q5JJ91 as seed ortholog is 100%.
Bootstrap support for F2SEE2 as seed ortholog is 82%.

Group of orthologs #211. Best score 102 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:102 T.rubrum:102

Q5JGN5              	100.00%		F2SUU0              	100.00%
Bootstrap support for Q5JGN5 as seed ortholog is 100%.
Bootstrap support for F2SUU0 as seed ortholog is 100%.

Group of orthologs #212. Best score 102 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:102 T.rubrum:46

Q5JIT6              	100.00%		F2SWE6              	100.00%
Bootstrap support for Q5JIT6 as seed ortholog is 100%.
Bootstrap support for F2SWE6 as seed ortholog is 89%.

Group of orthologs #213. Best score 100 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:100 T.rubrum:100

Q5JEZ6              	100.00%		F2SC84              	100.00%
Bootstrap support for Q5JEZ6 as seed ortholog is 100%.
Bootstrap support for F2SC84 as seed ortholog is 100%.

Group of orthologs #214. Best score 100 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:100 T.rubrum:100

Q5JI91              	100.00%		F2SL53              	100.00%
Bootstrap support for Q5JI91 as seed ortholog is 100%.
Bootstrap support for F2SL53 as seed ortholog is 100%.

Group of orthologs #215. Best score 97 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:97 T.rubrum:49

Q5JH42              	100.00%		F2SWY7              	100.00%
                    	       		F2SCT6              	19.78%
Bootstrap support for Q5JH42 as seed ortholog is 100%.
Bootstrap support for F2SWY7 as seed ortholog is 87%.

Group of orthologs #216. Best score 96 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:96 T.rubrum:96

Q5JD31              	100.00%		F2SHE5              	100.00%
Bootstrap support for Q5JD31 as seed ortholog is 100%.
Bootstrap support for F2SHE5 as seed ortholog is 100%.

Group of orthologs #217. Best score 96 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:96 T.rubrum:35

Q5JIR6              	100.00%		F2SWD9              	100.00%
Bootstrap support for Q5JIR6 as seed ortholog is 100%.
Bootstrap support for F2SWD9 as seed ortholog is 86%.

Group of orthologs #218. Best score 95 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:95 T.rubrum:95

Q5JIZ7              	100.00%		F2SCU1              	100.00%
                    	       		F2SN50              	11.39%
                    	       		F2SJ62              	7.63%
Bootstrap support for Q5JIZ7 as seed ortholog is 100%.
Bootstrap support for F2SCU1 as seed ortholog is 100%.

Group of orthologs #219. Best score 95 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:95 T.rubrum:95

Q5JI98              	100.00%		F2SWS0              	100.00%
Bootstrap support for Q5JI98 as seed ortholog is 100%.
Bootstrap support for F2SWS0 as seed ortholog is 100%.

Group of orthologs #220. Best score 94 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:94 T.rubrum:94

Q5JIR1              	100.00%		F2SV48              	100.00%
Bootstrap support for Q5JIR1 as seed ortholog is 100%.
Bootstrap support for F2SV48 as seed ortholog is 100%.

Group of orthologs #221. Best score 93 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:93 T.rubrum:45

Q5JEU9              	100.00%		F2SFJ4              	100.00%
Bootstrap support for Q5JEU9 as seed ortholog is 100%.
Bootstrap support for F2SFJ4 as seed ortholog is 91%.

Group of orthologs #222. Best score 91 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:91 T.rubrum:91

Q5JI34              	100.00%		F2SR11              	100.00%
                    	       		F2SLG4              	26.45%
                    	       		F2SKA8              	17.34%
Bootstrap support for Q5JI34 as seed ortholog is 100%.
Bootstrap support for F2SR11 as seed ortholog is 100%.

Group of orthologs #223. Best score 91 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:91 T.rubrum:91

Q5JH36              	100.00%		F2SUF2              	100.00%
Bootstrap support for Q5JH36 as seed ortholog is 100%.
Bootstrap support for F2SUF2 as seed ortholog is 100%.

Group of orthologs #224. Best score 90 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:90 T.rubrum:90

Q5JF32              	100.00%		F2STG3              	100.00%
Q5JFD3              	45.90%		
Bootstrap support for Q5JF32 as seed ortholog is 100%.
Bootstrap support for F2STG3 as seed ortholog is 100%.

Group of orthologs #225. Best score 90 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:90 T.rubrum:90

Q5JH18              	100.00%		F2SP76              	100.00%
Bootstrap support for Q5JH18 as seed ortholog is 100%.
Bootstrap support for F2SP76 as seed ortholog is 100%.

Group of orthologs #226. Best score 89 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:89 T.rubrum:13

Q76CZ2              	100.00%		F2SHH8              	100.00%
Bootstrap support for Q76CZ2 as seed ortholog is 100%.
Bootstrap support for F2SHH8 as seed ortholog is 67%.
Alternative seed ortholog is F2SPB7 (13 bits away from this cluster)

Group of orthologs #227. Best score 88 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:88 T.rubrum:88

Q5JGM4              	100.00%		F2SNG8              	100.00%
Bootstrap support for Q5JGM4 as seed ortholog is 100%.
Bootstrap support for F2SNG8 as seed ortholog is 100%.

Group of orthologs #228. Best score 87 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:87 T.rubrum:87

Q5JJB9              	100.00%		F2SZT0              	100.00%
Q5JFZ8              	100.00%		F2SI59              	100.00%
Q5JHY2              	13.52%		
Bootstrap support for Q5JJB9 as seed ortholog is 100%.
Bootstrap support for Q5JFZ8 as seed ortholog is 100%.
Bootstrap support for F2SZT0 as seed ortholog is 100%.
Bootstrap support for F2SI59 as seed ortholog is 100%.

Group of orthologs #229. Best score 87 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:87 T.rubrum:87

Q5JEX4              	100.00%		F2SIQ7              	100.00%
Bootstrap support for Q5JEX4 as seed ortholog is 100%.
Bootstrap support for F2SIQ7 as seed ortholog is 100%.

Group of orthologs #230. Best score 87 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:87 T.rubrum:87

Q5JJ64              	100.00%		F2SFZ1              	100.00%
Bootstrap support for Q5JJ64 as seed ortholog is 100%.
Bootstrap support for F2SFZ1 as seed ortholog is 100%.

Group of orthologs #231. Best score 86 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 T.rubrum:86

Q5JJF6              	100.00%		F2SFG9              	100.00%
Bootstrap support for Q5JJF6 as seed ortholog is 100%.
Bootstrap support for F2SFG9 as seed ortholog is 100%.

Group of orthologs #232. Best score 86 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 T.rubrum:86

Q5JEB7              	100.00%		F2SS54              	100.00%
Bootstrap support for Q5JEB7 as seed ortholog is 100%.
Bootstrap support for F2SS54 as seed ortholog is 100%.

Group of orthologs #233. Best score 86 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 T.rubrum:86

Q5JGR3              	100.00%		F2SR22              	100.00%
Bootstrap support for Q5JGR3 as seed ortholog is 100%.
Bootstrap support for F2SR22 as seed ortholog is 100%.

Group of orthologs #234. Best score 85 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:85 T.rubrum:85

Q5JJF4              	100.00%		F2SKJ0              	100.00%
Bootstrap support for Q5JJF4 as seed ortholog is 100%.
Bootstrap support for F2SKJ0 as seed ortholog is 100%.

Group of orthologs #235. Best score 85 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:85 T.rubrum:85

Q5JDH9              	100.00%		F2STM7              	100.00%
Bootstrap support for Q5JDH9 as seed ortholog is 100%.
Bootstrap support for F2STM7 as seed ortholog is 100%.

Group of orthologs #236. Best score 85 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:85 T.rubrum:85

Q5JDB8              	100.00%		F2SX29              	100.00%
Bootstrap support for Q5JDB8 as seed ortholog is 100%.
Bootstrap support for F2SX29 as seed ortholog is 100%.

Group of orthologs #237. Best score 85 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:85 T.rubrum:24

Q5JH34              	100.00%		F2SUM4              	100.00%
Bootstrap support for Q5JH34 as seed ortholog is 100%.
Bootstrap support for F2SUM4 as seed ortholog is 84%.

Group of orthologs #238. Best score 85 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:85 T.rubrum:85

Q5JG19              	100.00%		F2SYI8              	100.00%
Bootstrap support for Q5JG19 as seed ortholog is 100%.
Bootstrap support for F2SYI8 as seed ortholog is 100%.

Group of orthologs #239. Best score 85 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:85 T.rubrum:85

Q5JIS3              	100.00%		F2SW06              	100.00%
Bootstrap support for Q5JIS3 as seed ortholog is 100%.
Bootstrap support for F2SW06 as seed ortholog is 100%.

Group of orthologs #240. Best score 84 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:84 T.rubrum:84

Q5JD58              	100.00%		F2SUJ2              	100.00%
                    	       		F2STG6              	14.52%
Bootstrap support for Q5JD58 as seed ortholog is 100%.
Bootstrap support for F2SUJ2 as seed ortholog is 100%.

Group of orthologs #241. Best score 84 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:84 T.rubrum:84

Q5JFZ5              	100.00%		F2SI64              	100.00%
Bootstrap support for Q5JFZ5 as seed ortholog is 100%.
Bootstrap support for F2SI64 as seed ortholog is 100%.

Group of orthologs #242. Best score 84 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:84 T.rubrum:84

Q5JDH4              	100.00%		F2SWQ3              	100.00%
Bootstrap support for Q5JDH4 as seed ortholog is 100%.
Bootstrap support for F2SWQ3 as seed ortholog is 100%.

Group of orthologs #243. Best score 84 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:84 T.rubrum:84

Q5JJB4              	100.00%		F2SR53              	100.00%
Bootstrap support for Q5JJB4 as seed ortholog is 100%.
Bootstrap support for F2SR53 as seed ortholog is 100%.

Group of orthologs #244. Best score 83 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:34 T.rubrum:11

Q5JJE5              	100.00%		F2SKY6              	100.00%
                    	       		F2T1A5              	33.95%
Bootstrap support for Q5JJE5 as seed ortholog is 89%.
Bootstrap support for F2SKY6 as seed ortholog is 62%.
Alternative seed ortholog is F2SWP7 (11 bits away from this cluster)

Group of orthologs #245. Best score 82 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:82 T.rubrum:8

Q68BJ6              	100.00%		F2SF75              	100.00%
Q68BJ7              	33.33%		
Q6I7B6              	29.55%		
Bootstrap support for Q68BJ6 as seed ortholog is 100%.
Bootstrap support for F2SF75 as seed ortholog is 53%.
Alternative seed ortholog is F2SI61 (8 bits away from this cluster)

Group of orthologs #246. Best score 82 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:82 T.rubrum:82

Q5JFT0              	100.00%		F2SPP1              	100.00%
Bootstrap support for Q5JFT0 as seed ortholog is 100%.
Bootstrap support for F2SPP1 as seed ortholog is 100%.

Group of orthologs #247. Best score 82 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:82 T.rubrum:82

Q5JHT0              	100.00%		F2T1C6              	100.00%
Bootstrap support for Q5JHT0 as seed ortholog is 100%.
Bootstrap support for F2T1C6 as seed ortholog is 100%.

Group of orthologs #248. Best score 81 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:81 T.rubrum:81

Q5JGQ6              	100.00%		F2SNG5              	100.00%
Bootstrap support for Q5JGQ6 as seed ortholog is 100%.
Bootstrap support for F2SNG5 as seed ortholog is 100%.

Group of orthologs #249. Best score 81 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:81 T.rubrum:81

Q5JJG5              	100.00%		F2SRS0              	100.00%
Bootstrap support for Q5JJG5 as seed ortholog is 100%.
Bootstrap support for F2SRS0 as seed ortholog is 100%.

Group of orthologs #250. Best score 80 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:80 T.rubrum:33

Q5JEE1              	100.00%		F2SIJ0              	100.00%
Bootstrap support for Q5JEE1 as seed ortholog is 100%.
Bootstrap support for F2SIJ0 as seed ortholog is 88%.

Group of orthologs #251. Best score 80 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:80 T.rubrum:80

Q5JIQ8              	100.00%		F2SYY5              	100.00%
Bootstrap support for Q5JIQ8 as seed ortholog is 100%.
Bootstrap support for F2SYY5 as seed ortholog is 100%.

Group of orthologs #252. Best score 79 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:79 T.rubrum:9

Q5JDW2              	100.00%		F2SZR0              	100.00%
Q5JIH2              	5.68%		
Bootstrap support for Q5JDW2 as seed ortholog is 100%.
Bootstrap support for F2SZR0 as seed ortholog is 74%.
Alternative seed ortholog is F2SVC3 (9 bits away from this cluster)

Group of orthologs #253. Best score 79 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:79 T.rubrum:1

Q5JIA1              	100.00%		F2T0F3              	100.00%
                    	       		F2SRK6              	13.31%
Bootstrap support for Q5JIA1 as seed ortholog is 100%.
Bootstrap support for F2T0F3 as seed ortholog is 45%.
Alternative seed ortholog is F2SXJ9 (1 bits away from this cluster)

Group of orthologs #254. Best score 79 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:79 T.rubrum:79

Q5JIR5              	100.00%		F2SHW4              	100.00%
Bootstrap support for Q5JIR5 as seed ortholog is 100%.
Bootstrap support for F2SHW4 as seed ortholog is 100%.

Group of orthologs #255. Best score 79 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:79 T.rubrum:79

Q5JH53              	100.00%		F2SYQ7              	100.00%
Bootstrap support for Q5JH53 as seed ortholog is 100%.
Bootstrap support for F2SYQ7 as seed ortholog is 100%.

Group of orthologs #256. Best score 78 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:3 T.rubrum:78

Q5JHE4              	100.00%		F2SCI8              	100.00%
Bootstrap support for Q5JHE4 as seed ortholog is 61%.
Alternative seed ortholog is Q5JG52 (3 bits away from this cluster)
Bootstrap support for F2SCI8 as seed ortholog is 100%.

Group of orthologs #257. Best score 78 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:78 T.rubrum:17

Q5JHP6              	100.00%		F2SE19              	100.00%
Bootstrap support for Q5JHP6 as seed ortholog is 100%.
Bootstrap support for F2SE19 as seed ortholog is 72%.
Alternative seed ortholog is F2SUE5 (17 bits away from this cluster)

Group of orthologs #258. Best score 77 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:77 T.rubrum:23

Q5JF59              	100.00%		F2SD74              	100.00%
Q5JFJ1              	100.00%		
Q5JJ54              	34.94%		
Q5JEB0              	29.98%		
Q5JG78              	23.22%		
Q5JIG9              	10.63%		
Q5JHD4              	10.23%		
Q5JJ96              	10.14%		
Q5JEP9              	9.71%		
Q5JDD3              	9.18%		
Q5JIN8              	9.02%		
Q5JE43              	9.01%		
Q5JEM4              	8.86%		
Q5JG70              	7.89%		
Q5JDA7              	7.73%		
Q5JIB0              	7.57%		
Q5JDQ2              	7.41%		
Q5JGD3              	7.28%		
Q5JJ95              	7.28%		
Q5JDU2              	6.76%		
Q5JGV1              	6.76%		
Q5JH77              	6.59%		
Q5JHJ6              	6.28%		
Q5JCX0              	5.20%		
Bootstrap support for Q5JF59 as seed ortholog is 100%.
Bootstrap support for Q5JFJ1 as seed ortholog is 100%.
Bootstrap support for F2SD74 as seed ortholog is 80%.

Group of orthologs #259. Best score 77 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:77 T.rubrum:77

Q5JFR6              	100.00%		F2SGB5              	100.00%
Bootstrap support for Q5JFR6 as seed ortholog is 100%.
Bootstrap support for F2SGB5 as seed ortholog is 100%.

Group of orthologs #260. Best score 76 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:76 T.rubrum:76

Q5JDH1              	100.00%		F2SND9              	100.00%
Bootstrap support for Q5JDH1 as seed ortholog is 100%.
Bootstrap support for F2SND9 as seed ortholog is 100%.

Group of orthologs #261. Best score 76 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:76 T.rubrum:76

Q5JF76              	100.00%		F2SPI1              	100.00%
Bootstrap support for Q5JF76 as seed ortholog is 100%.
Bootstrap support for F2SPI1 as seed ortholog is 100%.

Group of orthologs #262. Best score 76 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:76 T.rubrum:76

Q5JDM6              	100.00%		F2SRY3              	100.00%
Bootstrap support for Q5JDM6 as seed ortholog is 100%.
Bootstrap support for F2SRY3 as seed ortholog is 100%.

Group of orthologs #263. Best score 76 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:76 T.rubrum:76

Q5JHF4              	100.00%		F2SQ87              	100.00%
Bootstrap support for Q5JHF4 as seed ortholog is 100%.
Bootstrap support for F2SQ87 as seed ortholog is 100%.

Group of orthologs #264. Best score 76 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:76 T.rubrum:76

Q5JE35              	100.00%		F2SUI1              	100.00%
Bootstrap support for Q5JE35 as seed ortholog is 100%.
Bootstrap support for F2SUI1 as seed ortholog is 100%.

Group of orthologs #265. Best score 76 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:76 T.rubrum:76

Q5JIB2              	100.00%		F2SZP7              	100.00%
Bootstrap support for Q5JIB2 as seed ortholog is 100%.
Bootstrap support for F2SZP7 as seed ortholog is 100%.

Group of orthologs #266. Best score 75 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:75 T.rubrum:75

Q5JFG1              	100.00%		F2SIG6              	100.00%
                    	       		F2SC66              	31.25%
                    	       		F2SGC1              	14.00%
                    	       		F2SC03              	11.57%
Bootstrap support for Q5JFG1 as seed ortholog is 100%.
Bootstrap support for F2SIG6 as seed ortholog is 100%.

Group of orthologs #267. Best score 75 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:75 T.rubrum:75

Q5JET2              	100.00%		F2SHP1              	100.00%
                    	       		F2SRJ6              	5.26%
Bootstrap support for Q5JET2 as seed ortholog is 100%.
Bootstrap support for F2SHP1 as seed ortholog is 100%.

Group of orthologs #268. Best score 75 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:75 T.rubrum:75

Q5JHB4              	100.00%		F2SSH1              	100.00%
Q5JER0              	22.51%		
Bootstrap support for Q5JHB4 as seed ortholog is 100%.
Bootstrap support for F2SSH1 as seed ortholog is 100%.

Group of orthologs #269. Best score 74 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 T.rubrum:74

Q5JHY3              	100.00%		F2SGE3              	100.00%
Q5JII8              	31.67%		F2SXW0              	20.26%
                    	       		F2SQ51              	16.45%
                    	       		F2SJK9              	16.35%
                    	       		F2SSS4              	13.34%
                    	       		F2SFW9              	8.63%
Bootstrap support for Q5JHY3 as seed ortholog is 100%.
Bootstrap support for F2SGE3 as seed ortholog is 100%.

Group of orthologs #270. Best score 74 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 T.rubrum:74

Q5JGC2              	100.00%		F2SH78              	100.00%
Bootstrap support for Q5JGC2 as seed ortholog is 100%.
Bootstrap support for F2SH78 as seed ortholog is 100%.

Group of orthologs #271. Best score 74 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 T.rubrum:74

Q5JI44              	100.00%		F2SHJ7              	100.00%
Bootstrap support for Q5JI44 as seed ortholog is 100%.
Bootstrap support for F2SHJ7 as seed ortholog is 100%.

Group of orthologs #272. Best score 74 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 T.rubrum:74

Q5JJC9              	100.00%		F2SI72              	100.00%
Bootstrap support for Q5JJC9 as seed ortholog is 100%.
Bootstrap support for F2SI72 as seed ortholog is 100%.

Group of orthologs #273. Best score 74 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 T.rubrum:74

Q5JGS7              	100.00%		F2SY81              	100.00%
Bootstrap support for Q5JGS7 as seed ortholog is 100%.
Bootstrap support for F2SY81 as seed ortholog is 100%.

Group of orthologs #274. Best score 73 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:73 T.rubrum:73

Q5JGQ5              	100.00%		F2SI23              	100.00%
Q5JGQ4              	56.02%		
Q5JIE2              	10.76%		
Bootstrap support for Q5JGQ5 as seed ortholog is 100%.
Bootstrap support for F2SI23 as seed ortholog is 100%.

Group of orthologs #275. Best score 73 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:73 T.rubrum:73

Q5JFW9              	100.00%		F2SL22              	100.00%
                    	       		F2T135              	15.93%
Bootstrap support for Q5JFW9 as seed ortholog is 100%.
Bootstrap support for F2SL22 as seed ortholog is 100%.

Group of orthologs #276. Best score 72 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:72 T.rubrum:72

Q5JDZ1              	100.00%		F2SCS9              	100.00%
Bootstrap support for Q5JDZ1 as seed ortholog is 100%.
Bootstrap support for F2SCS9 as seed ortholog is 100%.

Group of orthologs #277. Best score 71 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:71 T.rubrum:71

Q5JHC8              	100.00%		F2STD5              	100.00%
                    	       		F2SJ89              	23.78%
Bootstrap support for Q5JHC8 as seed ortholog is 100%.
Bootstrap support for F2STD5 as seed ortholog is 100%.

Group of orthologs #278. Best score 71 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:71 T.rubrum:71

Q5JG26              	100.00%		F2SNE6              	100.00%
Bootstrap support for Q5JG26 as seed ortholog is 100%.
Bootstrap support for F2SNE6 as seed ortholog is 100%.

Group of orthologs #279. Best score 70 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:70 T.rubrum:70

Q5JFN5              	100.00%		F2SH09              	100.00%
Q5JD27              	10.72%		
Bootstrap support for Q5JFN5 as seed ortholog is 100%.
Bootstrap support for F2SH09 as seed ortholog is 100%.

Group of orthologs #280. Best score 70 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:70 T.rubrum:70

Q5JIY3              	100.00%		F2T0R6              	100.00%
Bootstrap support for Q5JIY3 as seed ortholog is 100%.
Bootstrap support for F2T0R6 as seed ortholog is 100%.

Group of orthologs #281. Best score 69 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:69 T.rubrum:69

Q5JIJ0              	100.00%		F2SJ59              	100.00%
                    	       		F2SJE0              	36.00%
                    	       		F2SW54              	8.10%
Bootstrap support for Q5JIJ0 as seed ortholog is 100%.
Bootstrap support for F2SJ59 as seed ortholog is 100%.

Group of orthologs #282. Best score 69 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:69 T.rubrum:69

Q5JEM6              	100.00%		F2SZA9              	100.00%
Bootstrap support for Q5JEM6 as seed ortholog is 100%.
Bootstrap support for F2SZA9 as seed ortholog is 100%.

Group of orthologs #283. Best score 68 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:68 T.rubrum:68

Q5JGM0              	100.00%		F2SGE4              	100.00%
Bootstrap support for Q5JGM0 as seed ortholog is 100%.
Bootstrap support for F2SGE4 as seed ortholog is 100%.

Group of orthologs #284. Best score 68 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:68 T.rubrum:68

O74035              	100.00%		F2SU13              	100.00%
Bootstrap support for O74035 as seed ortholog is 100%.
Bootstrap support for F2SU13 as seed ortholog is 100%.

Group of orthologs #285. Best score 68 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:68 T.rubrum:68

Q5JHS3              	100.00%		F2SQ89              	100.00%
Bootstrap support for Q5JHS3 as seed ortholog is 100%.
Bootstrap support for F2SQ89 as seed ortholog is 100%.

Group of orthologs #286. Best score 67 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:67 T.rubrum:67

Q5JGP4              	100.00%		F2SS89              	100.00%
                    	       		F2SFH1              	36.80%
                    	       		F2SD06              	35.19%
Bootstrap support for Q5JGP4 as seed ortholog is 100%.
Bootstrap support for F2SS89 as seed ortholog is 100%.

Group of orthologs #287. Best score 67 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:67 T.rubrum:67

Q5JH60              	100.00%		F2SD46              	100.00%
Q5JJ48              	5.11%		
Bootstrap support for Q5JH60 as seed ortholog is 100%.
Bootstrap support for F2SD46 as seed ortholog is 100%.

Group of orthologs #288. Best score 67 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:67 T.rubrum:67

Q5JHC0              	100.00%		F2ST56              	100.00%
Q5JHG7              	6.65%		
Bootstrap support for Q5JHC0 as seed ortholog is 100%.
Bootstrap support for F2ST56 as seed ortholog is 100%.

Group of orthologs #289. Best score 67 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:67 T.rubrum:67

Q5JGR4              	100.00%		F2SGB4              	100.00%
Bootstrap support for Q5JGR4 as seed ortholog is 100%.
Bootstrap support for F2SGB4 as seed ortholog is 100%.

Group of orthologs #290. Best score 67 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:67 T.rubrum:67

Q5JDC4              	100.00%		F2SL94              	100.00%
Bootstrap support for Q5JDC4 as seed ortholog is 100%.
Bootstrap support for F2SL94 as seed ortholog is 100%.

Group of orthologs #291. Best score 66 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:66 T.rubrum:66

Q5JDV0              	100.00%		F2SXK5              	100.00%
                    	       		F2SMW8              	19.83%
                    	       		F2SDG3              	7.38%
Bootstrap support for Q5JDV0 as seed ortholog is 100%.
Bootstrap support for F2SXK5 as seed ortholog is 100%.

Group of orthologs #292. Best score 66 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:66 T.rubrum:66

Q5JEK8              	100.00%		F2SEX9              	100.00%
Bootstrap support for Q5JEK8 as seed ortholog is 100%.
Bootstrap support for F2SEX9 as seed ortholog is 100%.

Group of orthologs #293. Best score 66 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:66 T.rubrum:66

Q5JGN3              	100.00%		F2SH80              	100.00%
Bootstrap support for Q5JGN3 as seed ortholog is 100%.
Bootstrap support for F2SH80 as seed ortholog is 100%.

Group of orthologs #294. Best score 65 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:65 T.rubrum:4

Q5JHS6              	100.00%		F2SKZ7              	100.00%
                    	       		F2SWD1              	41.27%
                    	       		F2SF98              	37.53%
                    	       		F2SLS8              	32.92%
                    	       		F2SWB9              	23.44%
                    	       		F2SKR5              	21.82%
                    	       		F2SHV1              	20.32%
                    	       		F2SHC4              	20.20%
                    	       		F2SUE4              	19.70%
                    	       		F2SD04              	16.33%
                    	       		F2SJP2              	16.21%
                    	       		F2SM53              	13.97%
                    	       		F2SQL0              	12.59%
                    	       		F2SUC5              	12.47%
                    	       		F2SK85              	12.22%
                    	       		F2SEQ6              	12.09%
                    	       		F2SLJ9              	11.10%
                    	       		F2T1D9              	8.73%
Bootstrap support for Q5JHS6 as seed ortholog is 100%.
Bootstrap support for F2SKZ7 as seed ortholog is 65%.
Alternative seed ortholog is F2SS47 (4 bits away from this cluster)

Group of orthologs #295. Best score 65 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:65 T.rubrum:65

Q5JFI2              	100.00%		F2SWE7              	100.00%
                    	       		F2SWA6              	36.84%
Bootstrap support for Q5JFI2 as seed ortholog is 100%.
Bootstrap support for F2SWE7 as seed ortholog is 100%.

Group of orthologs #296. Best score 65 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:65 T.rubrum:65

Q5JDS0              	100.00%		F2SE12              	100.00%
Bootstrap support for Q5JDS0 as seed ortholog is 100%.
Bootstrap support for F2SE12 as seed ortholog is 100%.

Group of orthologs #297. Best score 65 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:65 T.rubrum:65

Q5JH21              	100.00%		F2SNP3              	100.00%
Bootstrap support for Q5JH21 as seed ortholog is 100%.
Bootstrap support for F2SNP3 as seed ortholog is 100%.

Group of orthologs #298. Best score 65 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:65 T.rubrum:65

Q5JI42              	100.00%		F2SQN5              	100.00%
Bootstrap support for Q5JI42 as seed ortholog is 100%.
Bootstrap support for F2SQN5 as seed ortholog is 100%.

Group of orthologs #299. Best score 65 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:65 T.rubrum:65

Q5JH93              	100.00%		F2T151              	100.00%
Bootstrap support for Q5JH93 as seed ortholog is 100%.
Bootstrap support for F2T151 as seed ortholog is 100%.

Group of orthologs #300. Best score 64 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:64 T.rubrum:9

Q5JFY8              	100.00%		F2T0X9              	100.00%
Bootstrap support for Q5JFY8 as seed ortholog is 100%.
Bootstrap support for F2T0X9 as seed ortholog is 60%.
Alternative seed ortholog is F2SEY1 (9 bits away from this cluster)

Group of orthologs #301. Best score 63 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:63 T.rubrum:63

Q5JHM7              	100.00%		F2SN75              	100.00%
Q5JEC0              	32.23%		
Bootstrap support for Q5JHM7 as seed ortholog is 100%.
Bootstrap support for F2SN75 as seed ortholog is 100%.

Group of orthologs #302. Best score 63 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:63 T.rubrum:63

Q5JIC4              	100.00%		F2SEX4              	100.00%
Bootstrap support for Q5JIC4 as seed ortholog is 100%.
Bootstrap support for F2SEX4 as seed ortholog is 100%.

Group of orthologs #303. Best score 62 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:62 T.rubrum:62

Q5JE51              	100.00%		F2SD38              	100.00%
Bootstrap support for Q5JE51 as seed ortholog is 100%.
Bootstrap support for F2SD38 as seed ortholog is 100%.

Group of orthologs #304. Best score 62 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:62 T.rubrum:62

Q5JJH0              	100.00%		F2SHM5              	100.00%
Bootstrap support for Q5JJH0 as seed ortholog is 100%.
Bootstrap support for F2SHM5 as seed ortholog is 100%.

Group of orthologs #305. Best score 62 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:62 T.rubrum:62

Q5JIQ0              	100.00%		F2SJ15              	100.00%
Bootstrap support for Q5JIQ0 as seed ortholog is 100%.
Bootstrap support for F2SJ15 as seed ortholog is 100%.

Group of orthologs #306. Best score 62 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:62 T.rubrum:62

Q5JHH1              	100.00%		F2SP55              	100.00%
Bootstrap support for Q5JHH1 as seed ortholog is 100%.
Bootstrap support for F2SP55 as seed ortholog is 100%.

Group of orthologs #307. Best score 61 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 T.rubrum:61

Q5JFG7              	100.00%		F2SEV6              	100.00%
Q5JFG2              	100.00%		F2SCG6              	100.00%
                    	       		F2SYJ9              	17.18%
                    	       		F2SQ98              	11.50%
                    	       		F2SSJ2              	7.44%
Bootstrap support for Q5JFG7 as seed ortholog is 100%.
Bootstrap support for Q5JFG2 as seed ortholog is 100%.
Bootstrap support for F2SEV6 as seed ortholog is 100%.
Bootstrap support for F2SCG6 as seed ortholog is 100%.

Group of orthologs #308. Best score 61 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 T.rubrum:61

Q5JFY9              	100.00%		F2SH22              	100.00%
Bootstrap support for Q5JFY9 as seed ortholog is 100%.
Bootstrap support for F2SH22 as seed ortholog is 100%.

Group of orthologs #309. Best score 61 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 T.rubrum:61

Q5JH80              	100.00%		F2SHD5              	100.00%
Bootstrap support for Q5JH80 as seed ortholog is 100%.
Bootstrap support for F2SHD5 as seed ortholog is 100%.

Group of orthologs #310. Best score 61 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 T.rubrum:61

Q5JJ26              	100.00%		F2SIZ8              	100.00%
Bootstrap support for Q5JJ26 as seed ortholog is 100%.
Bootstrap support for F2SIZ8 as seed ortholog is 100%.

Group of orthologs #311. Best score 61 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 T.rubrum:61

Q5JJG9              	100.00%		F2SJJ7              	100.00%
Bootstrap support for Q5JJG9 as seed ortholog is 100%.
Bootstrap support for F2SJJ7 as seed ortholog is 100%.

Group of orthologs #312. Best score 60 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:60 T.rubrum:60

Q5JG48              	100.00%		F2SYH0              	100.00%
                    	       		F2SN15              	5.67%
Bootstrap support for Q5JG48 as seed ortholog is 100%.
Bootstrap support for F2SYH0 as seed ortholog is 100%.

Group of orthologs #313. Best score 60 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:60 T.rubrum:17

Q5JIY4              	100.00%		F2SJ50              	100.00%
Bootstrap support for Q5JIY4 as seed ortholog is 100%.
Bootstrap support for F2SJ50 as seed ortholog is 73%.
Alternative seed ortholog is F2SIY1 (17 bits away from this cluster)

Group of orthologs #314. Best score 60 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:60 T.rubrum:60

Q5JH52              	100.00%		F2SNE3              	100.00%
Bootstrap support for Q5JH52 as seed ortholog is 100%.
Bootstrap support for F2SNE3 as seed ortholog is 100%.

Group of orthologs #315. Best score 60 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:60 T.rubrum:60

Q5JG15              	100.00%		F2SYH5              	100.00%
Bootstrap support for Q5JG15 as seed ortholog is 100%.
Bootstrap support for F2SYH5 as seed ortholog is 100%.

Group of orthologs #316. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 T.rubrum:3

Q5JF34              	100.00%		F2SBZ0              	100.00%
Bootstrap support for Q5JF34 as seed ortholog is 100%.
Bootstrap support for F2SBZ0 as seed ortholog is 41%.
Alternative seed ortholog is F2SK76 (3 bits away from this cluster)

Group of orthologs #317. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 T.rubrum:59

O74023              	100.00%		F2SI57              	100.00%
Bootstrap support for O74023 as seed ortholog is 100%.
Bootstrap support for F2SI57 as seed ortholog is 100%.

Group of orthologs #318. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 T.rubrum:59

Q5JJG2              	100.00%		F2SHR9              	100.00%
Bootstrap support for Q5JJG2 as seed ortholog is 100%.
Bootstrap support for F2SHR9 as seed ortholog is 100%.

Group of orthologs #319. Best score 58 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:58 T.rubrum:58

Q5JI15              	100.00%		F2T074              	100.00%
Q5JCY9              	24.60%		
Q5JDP5              	22.83%		
Q5JEW7              	17.70%		
Q5JDB4              	13.98%		
Bootstrap support for Q5JI15 as seed ortholog is 100%.
Bootstrap support for F2T074 as seed ortholog is 100%.

Group of orthologs #320. Best score 57 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:57 T.rubrum:57

Q5JFS7              	100.00%		F2SSU3              	100.00%
Q5JF29              	34.90%		
Bootstrap support for Q5JFS7 as seed ortholog is 100%.
Bootstrap support for F2SSU3 as seed ortholog is 100%.

Group of orthologs #321. Best score 57 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:57 T.rubrum:57

Q5JJ79              	100.00%		F2SM12              	100.00%
Bootstrap support for Q5JJ79 as seed ortholog is 100%.
Bootstrap support for F2SM12 as seed ortholog is 100%.

Group of orthologs #322. Best score 56 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:56 T.rubrum:56

Q5JH78              	100.00%		F2SE77              	100.00%
Bootstrap support for Q5JH78 as seed ortholog is 100%.
Bootstrap support for F2SE77 as seed ortholog is 100%.

Group of orthologs #323. Best score 56 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:56 T.rubrum:56

Q5JDL4              	100.00%		F2T154              	100.00%
Bootstrap support for Q5JDL4 as seed ortholog is 100%.
Bootstrap support for F2T154 as seed ortholog is 100%.

Group of orthologs #324. Best score 55 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:55 T.rubrum:55

Q5JE78              	100.00%		F2SIU2              	100.00%
Bootstrap support for Q5JE78 as seed ortholog is 100%.
Bootstrap support for F2SIU2 as seed ortholog is 100%.

Group of orthologs #325. Best score 55 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:55 T.rubrum:55

Q5JIE1              	100.00%		F2SGY9              	100.00%
Bootstrap support for Q5JIE1 as seed ortholog is 100%.
Bootstrap support for F2SGY9 as seed ortholog is 100%.

Group of orthologs #326. Best score 54 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:54 T.rubrum:2

Q5JIE9              	100.00%		F2SVJ2              	100.00%
                    	       		F2SNG9              	38.14%
Bootstrap support for Q5JIE9 as seed ortholog is 100%.
Bootstrap support for F2SVJ2 as seed ortholog is 59%.
Alternative seed ortholog is F2SD36 (2 bits away from this cluster)

Group of orthologs #327. Best score 54 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:54 T.rubrum:54

Q5JIU7              	100.00%		F2SXP2              	100.00%
Q5JI19              	21.43%		
Bootstrap support for Q5JIU7 as seed ortholog is 100%.
Bootstrap support for F2SXP2 as seed ortholog is 100%.

Group of orthologs #328. Best score 54 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:54 T.rubrum:54

Q5JIY8              	100.00%		F2SU76              	100.00%
Bootstrap support for Q5JIY8 as seed ortholog is 100%.
Bootstrap support for F2SU76 as seed ortholog is 100%.

Group of orthologs #329. Best score 54 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:54 T.rubrum:54

Q5JGT6              	100.00%		F2T1C3              	100.00%
Bootstrap support for Q5JGT6 as seed ortholog is 100%.
Bootstrap support for F2T1C3 as seed ortholog is 100%.

Group of orthologs #330. Best score 53 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:53 T.rubrum:53

Q8NKS4              	100.00%		F2SL72              	100.00%
Q5JJ90              	12.12%		F2STJ1              	19.75%
Bootstrap support for Q8NKS4 as seed ortholog is 100%.
Bootstrap support for F2SL72 as seed ortholog is 100%.

Group of orthologs #331. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 T.rubrum:52

Q5JJ42              	100.00%		F2ST88              	100.00%
Q5JEY7              	6.13%		
Bootstrap support for Q5JJ42 as seed ortholog is 100%.
Bootstrap support for F2ST88 as seed ortholog is 100%.

Group of orthologs #332. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 T.rubrum:52

Q5JE50              	100.00%		F2SHB1              	100.00%
Bootstrap support for Q5JE50 as seed ortholog is 100%.
Bootstrap support for F2SHB1 as seed ortholog is 100%.

Group of orthologs #333. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 T.rubrum:52

Q5JI92              	100.00%		F2SEA9              	100.00%
Bootstrap support for Q5JI92 as seed ortholog is 100%.
Bootstrap support for F2SEA9 as seed ortholog is 100%.

Group of orthologs #334. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 T.rubrum:52

Q5JDG7              	100.00%		F2SJY5              	100.00%
Bootstrap support for Q5JDG7 as seed ortholog is 100%.
Bootstrap support for F2SJY5 as seed ortholog is 100%.

Group of orthologs #335. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 T.rubrum:52

Q5JH82              	100.00%		F2SMQ6              	100.00%
Bootstrap support for Q5JH82 as seed ortholog is 100%.
Bootstrap support for F2SMQ6 as seed ortholog is 100%.

Group of orthologs #336. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 T.rubrum:52

Q5JI46              	100.00%		F2SS31              	100.00%
Bootstrap support for Q5JI46 as seed ortholog is 100%.
Bootstrap support for F2SS31 as seed ortholog is 100%.

Group of orthologs #337. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 T.rubrum:6

Q5JIE0              	100.00%		F2SSD7              	100.00%
Bootstrap support for Q5JIE0 as seed ortholog is 100%.
Bootstrap support for F2SSD7 as seed ortholog is 63%.
Alternative seed ortholog is F2SHN3 (6 bits away from this cluster)

Group of orthologs #338. Best score 50 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:50 T.rubrum:50

Q5JJF5              	100.00%		F2SNY5              	100.00%
Bootstrap support for Q5JJF5 as seed ortholog is 100%.
Bootstrap support for F2SNY5 as seed ortholog is 100%.

Group of orthologs #339. Best score 50 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:50 T.rubrum:50

Q5JJD9              	100.00%		F2SU94              	100.00%
Bootstrap support for Q5JJD9 as seed ortholog is 100%.
Bootstrap support for F2SU94 as seed ortholog is 100%.

Group of orthologs #340. Best score 49 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:49 T.rubrum:49

Q5JIP5              	100.00%		F2SF27              	100.00%
Bootstrap support for Q5JIP5 as seed ortholog is 100%.
Bootstrap support for F2SF27 as seed ortholog is 100%.

Group of orthologs #341. Best score 48 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:48 T.rubrum:48

Q5JJC2              	100.00%		F2SK86              	100.00%
Q5JHM0              	20.90%		F2SMB6              	13.81%
Bootstrap support for Q5JJC2 as seed ortholog is 100%.
Bootstrap support for F2SK86 as seed ortholog is 100%.

Group of orthologs #342. Best score 47 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:47 T.rubrum:47

Q5JFL6              	100.00%		F2SF72              	100.00%
                    	       		F2SG11              	32.16%
Bootstrap support for Q5JFL6 as seed ortholog is 100%.
Bootstrap support for F2SF72 as seed ortholog is 100%.

Group of orthologs #343. Best score 47 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:47 T.rubrum:47

Q5JEA3              	100.00%		F2SS49              	100.00%
Bootstrap support for Q5JEA3 as seed ortholog is 100%.
Bootstrap support for F2SS49 as seed ortholog is 100%.

Group of orthologs #344. Best score 47 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:47 T.rubrum:47

Q5JH10              	100.00%		F2SY61              	100.00%
Bootstrap support for Q5JH10 as seed ortholog is 100%.
Bootstrap support for F2SY61 as seed ortholog is 100%.

Group of orthologs #345. Best score 46 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:46 T.rubrum:46

Q5JG68              	100.00%		F2SEV5              	100.00%
Bootstrap support for Q5JG68 as seed ortholog is 100%.
Bootstrap support for F2SEV5 as seed ortholog is 100%.

Group of orthologs #346. Best score 46 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:46 T.rubrum:46

Q5JEL5              	100.00%		F2SKP9              	100.00%
Bootstrap support for Q5JEL5 as seed ortholog is 100%.
Bootstrap support for F2SKP9 as seed ortholog is 100%.

Group of orthologs #347. Best score 46 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:46 T.rubrum:46

Q5JHT3              	100.00%		F2T0S7              	100.00%
Bootstrap support for Q5JHT3 as seed ortholog is 100%.
Bootstrap support for F2T0S7 as seed ortholog is 100%.

Group of orthologs #348. Best score 45 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:45 T.rubrum:45

Q5JIX8              	100.00%		F2SJW4              	100.00%
Q5JJF0              	8.33%		
Bootstrap support for Q5JIX8 as seed ortholog is 100%.
Bootstrap support for F2SJW4 as seed ortholog is 100%.

Group of orthologs #349. Best score 44 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:44 T.rubrum:44

Q5JG46              	100.00%		F2SCS2              	100.00%
Q5JD61              	10.56%		
Q5JEG7              	8.31%		
Q5JJ85              	5.62%		
Bootstrap support for Q5JG46 as seed ortholog is 100%.
Bootstrap support for F2SCS2 as seed ortholog is 100%.

Group of orthologs #350. Best score 44 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:44 T.rubrum:44

Q5JED4              	100.00%		F2SPW4              	100.00%
Bootstrap support for Q5JED4 as seed ortholog is 100%.
Bootstrap support for F2SPW4 as seed ortholog is 100%.

Group of orthologs #351. Best score 44 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:44 T.rubrum:44

Q5JFQ4              	100.00%		F2T0A1              	100.00%
Bootstrap support for Q5JFQ4 as seed ortholog is 100%.
Bootstrap support for F2T0A1 as seed ortholog is 100%.

Group of orthologs #352. Best score 43 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:43 T.rubrum:43

Q5JI60              	100.00%		F2SGD9              	100.00%
Bootstrap support for Q5JI60 as seed ortholog is 100%.
Bootstrap support for F2SGD9 as seed ortholog is 100%.

Group of orthologs #353. Best score 42 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:42 T.rubrum:42

Q5JGN8              	100.00%		F2SET5              	100.00%
Q5JHQ2              	8.46%		F2SD60              	34.03%
Bootstrap support for Q5JGN8 as seed ortholog is 100%.
Bootstrap support for F2SET5 as seed ortholog is 100%.

Group of orthologs #354. Best score 42 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:42 T.rubrum:42

Q5JE88              	100.00%		F2SVP7              	100.00%
Bootstrap support for Q5JE88 as seed ortholog is 100%.
Bootstrap support for F2SVP7 as seed ortholog is 100%.

Group of orthologs #355. Best score 41 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:41 T.rubrum:41

Q5JF36              	100.00%		F2STT3              	100.00%
                    	       		F2SFG0              	45.38%
                    	       		F2SFH0              	9.75%
                    	       		F2ST62              	8.40%
                    	       		F2SUW4              	8.07%
                    	       		F2SY56              	6.05%
Bootstrap support for Q5JF36 as seed ortholog is 100%.
Bootstrap support for F2STT3 as seed ortholog is 100%.