###################################
385 groups of orthologs
445 in-paralogs from P.kodakaraensis
642 in-paralogs from T.rubripes
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 758 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:758 T.rubripes:66

Q5JE32              	100.00%		H2TAU8              	100.00%
Bootstrap support for Q5JE32 as seed ortholog is 100%.
Bootstrap support for H2TAU8 as seed ortholog is 83%.

Group of orthologs #2. Best score 671 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:671 T.rubripes:275

Q5JE33              	100.00%		H2U2N2              	100.00%
Bootstrap support for Q5JE33 as seed ortholog is 100%.
Bootstrap support for H2U2N2 as seed ortholog is 100%.

Group of orthologs #3. Best score 566 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:566 T.rubripes:35

Q5JE98              	100.00%		H2V8H7              	100.00%
Q9V2X2              	55.57%		
Bootstrap support for Q5JE98 as seed ortholog is 100%.
Bootstrap support for H2V8H7 as seed ortholog is 86%.

Group of orthologs #4. Best score 545 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:545 T.rubripes:545

Q5JIG4              	100.00%		H2SCQ9              	100.00%
Bootstrap support for Q5JIG4 as seed ortholog is 100%.
Bootstrap support for H2SCQ9 as seed ortholog is 100%.

Group of orthologs #5. Best score 543 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:543 T.rubripes:438

Q5JIR3              	100.00%		H2RQI3              	100.00%
Bootstrap support for Q5JIR3 as seed ortholog is 100%.
Bootstrap support for H2RQI3 as seed ortholog is 100%.

Group of orthologs #6. Best score 543 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:543 T.rubripes:276

Q5JIS8              	100.00%		H2UBG3              	100.00%
Bootstrap support for Q5JIS8 as seed ortholog is 100%.
Bootstrap support for H2UBG3 as seed ortholog is 100%.

Group of orthologs #7. Best score 542 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:542 T.rubripes:431

Q5JDX6              	100.00%		H2V6N6              	100.00%
Bootstrap support for Q5JDX6 as seed ortholog is 100%.
Bootstrap support for H2V6N6 as seed ortholog is 100%.

Group of orthologs #8. Best score 540 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:540 T.rubripes:540

Q5JGF1              	100.00%		H2TJ57              	100.00%
Bootstrap support for Q5JGF1 as seed ortholog is 100%.
Bootstrap support for H2TJ57 as seed ortholog is 100%.

Group of orthologs #9. Best score 528 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:528 T.rubripes:186

Q5JJ31              	100.00%		H2SY47              	100.00%
Bootstrap support for Q5JJ31 as seed ortholog is 100%.
Bootstrap support for H2SY47 as seed ortholog is 99%.

Group of orthologs #10. Best score 512 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:512 T.rubripes:350

Q5JDF4              	100.00%		H2UBY6              	100.00%
                    	       		H2S842              	44.25%
Bootstrap support for Q5JDF4 as seed ortholog is 100%.
Bootstrap support for H2UBY6 as seed ortholog is 100%.

Group of orthologs #11. Best score 468 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:468 T.rubripes:305

Q8NKR7              	100.00%		H2SKD0              	100.00%
Bootstrap support for Q8NKR7 as seed ortholog is 100%.
Bootstrap support for H2SKD0 as seed ortholog is 100%.

Group of orthologs #12. Best score 465 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:465 T.rubripes:316

Q5JIR2              	100.00%		H2VEU6              	100.00%
Bootstrap support for Q5JIR2 as seed ortholog is 100%.
Bootstrap support for H2VEU6 as seed ortholog is 100%.

Group of orthologs #13. Best score 459 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:459 T.rubripes:459

Q5JCZ1              	100.00%		H2TJF4              	100.00%
Bootstrap support for Q5JCZ1 as seed ortholog is 100%.
Bootstrap support for H2TJF4 as seed ortholog is 100%.

Group of orthologs #14. Best score 451 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:451 T.rubripes:159

Q5JFZ4              	100.00%		H2SKS4              	100.00%
                    	       		H2U6U7              	82.67%
                    	       		H2SNC1              	81.21%
                    	       		H2SIC4              	77.24%
                    	       		H2TDB3              	47.81%
Bootstrap support for Q5JFZ4 as seed ortholog is 100%.
Bootstrap support for H2SKS4 as seed ortholog is 99%.

Group of orthologs #15. Best score 449 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:449 T.rubripes:151

Q5JFZ3              	100.00%		H2V9Q6              	100.00%
                    	       		H2UYE7              	12.18%
Bootstrap support for Q5JFZ3 as seed ortholog is 100%.
Bootstrap support for H2V9Q6 as seed ortholog is 99%.

Group of orthologs #16. Best score 444 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:444 T.rubripes:444

Q5JEV6              	100.00%		H2TDQ9              	100.00%
                    	       		H2UN91              	69.16%
                    	       		H2RJX4              	44.63%
                    	       		H2RQ53              	29.67%
Bootstrap support for Q5JEV6 as seed ortholog is 100%.
Bootstrap support for H2TDQ9 as seed ortholog is 100%.

Group of orthologs #17. Best score 416 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:416 T.rubripes:110

O93623              	100.00%		H2SKL8              	100.00%
                    	       		H2U3D9              	71.60%
Bootstrap support for O93623 as seed ortholog is 100%.
Bootstrap support for H2SKL8 as seed ortholog is 97%.

Group of orthologs #18. Best score 416 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:416 T.rubripes:416

Q5JIP3              	100.00%		H2S4G6              	100.00%
Bootstrap support for Q5JIP3 as seed ortholog is 100%.
Bootstrap support for H2S4G6 as seed ortholog is 100%.

Group of orthologs #19. Best score 394 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:394 T.rubripes:1

Q52500              	100.00%		H2RM91              	100.00%
P61111              	72.12%		
Bootstrap support for Q52500 as seed ortholog is 100%.
Bootstrap support for H2RM91 as seed ortholog is 49%.
Alternative seed ortholog is P53451 (1 bits away from this cluster)

Group of orthologs #20. Best score 385 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:272 T.rubripes:1

Q5JJA2              	100.00%		H2UGU6              	100.00%
                    	       		H2TNH5              	37.84%
Bootstrap support for Q5JJA2 as seed ortholog is 100%.
Bootstrap support for H2UGU6 as seed ortholog is 56%.
Alternative seed ortholog is H2SX53 (1 bits away from this cluster)

Group of orthologs #21. Best score 384 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:384 T.rubripes:2

Q5JGE5              	100.00%		H2SIJ9              	100.00%
Bootstrap support for Q5JGE5 as seed ortholog is 100%.
Bootstrap support for H2SIJ9 as seed ortholog is 46%.
Alternative seed ortholog is H2TNQ1 (2 bits away from this cluster)

Group of orthologs #22. Best score 380 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:380 T.rubripes:380

Q5JID8              	100.00%		H2V721              	100.00%
Bootstrap support for Q5JID8 as seed ortholog is 100%.
Bootstrap support for H2V721 as seed ortholog is 100%.

Group of orthologs #23. Best score 379 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:379 T.rubripes:204

Q5JDZ7              	100.00%		H2ULD7              	100.00%
Bootstrap support for Q5JDZ7 as seed ortholog is 100%.
Bootstrap support for H2ULD7 as seed ortholog is 99%.

Group of orthologs #24. Best score 369 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:369 T.rubripes:15

Q5JHS5              	100.00%		H2SMC5              	100.00%
Bootstrap support for Q5JHS5 as seed ortholog is 100%.
Bootstrap support for H2SMC5 as seed ortholog is 66%.
Alternative seed ortholog is H2TF38 (15 bits away from this cluster)

Group of orthologs #25. Best score 366 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:366 T.rubripes:366

Q5JH71              	100.00%		H2RK26              	100.00%
                    	       		H2S5J5              	63.20%
Bootstrap support for Q5JH71 as seed ortholog is 100%.
Bootstrap support for H2RK26 as seed ortholog is 100%.

Group of orthologs #26. Best score 360 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:360 T.rubripes:360

Q5JJC8              	100.00%		H2SY48              	100.00%
Bootstrap support for Q5JJC8 as seed ortholog is 100%.
Bootstrap support for H2SY48 as seed ortholog is 100%.

Group of orthologs #27. Best score 352 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:352 T.rubripes:218

Q5JDL3              	100.00%		H2S2P6              	100.00%
Bootstrap support for Q5JDL3 as seed ortholog is 100%.
Bootstrap support for H2S2P6 as seed ortholog is 100%.

Group of orthologs #28. Best score 342 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:342 T.rubripes:19

Q5JD45              	100.00%		H2TAW5              	100.00%
Bootstrap support for Q5JD45 as seed ortholog is 100%.
Bootstrap support for H2TAW5 as seed ortholog is 59%.
Alternative seed ortholog is H2SLN7 (19 bits away from this cluster)

Group of orthologs #29. Best score 328 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:328 T.rubripes:328

Q5JED2              	100.00%		H2S0Z2              	100.00%
                    	       		H2T1G2              	21.42%
                    	       		H2TA81              	12.57%
Bootstrap support for Q5JED2 as seed ortholog is 100%.
Bootstrap support for H2S0Z2 as seed ortholog is 100%.

Group of orthologs #30. Best score 321 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:321 T.rubripes:97

Q5JHP3              	100.00%		H2SXG0              	100.00%
Bootstrap support for Q5JHP3 as seed ortholog is 100%.
Bootstrap support for H2SXG0 as seed ortholog is 99%.

Group of orthologs #31. Best score 317 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:317 T.rubripes:317

Q5JFN4              	100.00%		H2UTF0              	100.00%
Bootstrap support for Q5JFN4 as seed ortholog is 100%.
Bootstrap support for H2UTF0 as seed ortholog is 100%.

Group of orthologs #32. Best score 316 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:316 T.rubripes:5

Q5JIT1              	100.00%		H2T086              	100.00%
Bootstrap support for Q5JIT1 as seed ortholog is 100%.
Bootstrap support for H2T086 as seed ortholog is 47%.
Alternative seed ortholog is H2SYP6 (5 bits away from this cluster)

Group of orthologs #33. Best score 305 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:305 T.rubripes:261

Q5JEP3              	100.00%		H2TG51              	100.00%
Bootstrap support for Q5JEP3 as seed ortholog is 100%.
Bootstrap support for H2TG51 as seed ortholog is 100%.

Group of orthologs #34. Best score 305 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:305 T.rubripes:189

Q5JJ98              	100.00%		H2TIK3              	100.00%
Bootstrap support for Q5JJ98 as seed ortholog is 100%.
Bootstrap support for H2TIK3 as seed ortholog is 99%.

Group of orthologs #35. Best score 302 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:302 T.rubripes:302

Q76I93              	100.00%		H2U592              	100.00%
                    	       		H2SF71              	78.14%
                    	       		H2UME8              	52.78%
Bootstrap support for Q76I93 as seed ortholog is 100%.
Bootstrap support for H2U592 as seed ortholog is 100%.

Group of orthologs #36. Best score 300 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:300 T.rubripes:201

Q5JEW3              	100.00%		H2S9R4              	100.00%
Bootstrap support for Q5JEW3 as seed ortholog is 100%.
Bootstrap support for H2S9R4 as seed ortholog is 100%.

Group of orthologs #37. Best score 296 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:296 T.rubripes:296

Q5JIQ2              	100.00%		H2UGF7              	100.00%
Bootstrap support for Q5JIQ2 as seed ortholog is 100%.
Bootstrap support for H2UGF7 as seed ortholog is 100%.

Group of orthologs #38. Best score 296 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:296 T.rubripes:296

Q5JIF8              	100.00%		H2V6U3              	100.00%
Bootstrap support for Q5JIF8 as seed ortholog is 100%.
Bootstrap support for H2V6U3 as seed ortholog is 100%.

Group of orthologs #39. Best score 295 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:295 T.rubripes:73

Q5JFK3              	100.00%		H2S719              	100.00%
Bootstrap support for Q5JFK3 as seed ortholog is 100%.
Bootstrap support for H2S719 as seed ortholog is 90%.

Group of orthologs #40. Best score 291 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:291 T.rubripes:291

Q5JJH1              	100.00%		H2TCB5              	100.00%
Bootstrap support for Q5JJH1 as seed ortholog is 100%.
Bootstrap support for H2TCB5 as seed ortholog is 100%.

Group of orthologs #41. Best score 285 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:285 T.rubripes:56

Q5JGN7              	100.00%		P49696              	100.00%
                    	       		H2U2K8              	73.16%
                    	       		H2SJN8              	25.70%
Bootstrap support for Q5JGN7 as seed ortholog is 100%.
Bootstrap support for P49696 as seed ortholog is 80%.

Group of orthologs #42. Best score 285 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:285 T.rubripes:73

Q5JE75              	100.00%		H2SYX1              	100.00%
Bootstrap support for Q5JE75 as seed ortholog is 100%.
Bootstrap support for H2SYX1 as seed ortholog is 93%.

Group of orthologs #43. Best score 283 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:204 T.rubripes:167

Q5JET4              	100.00%		H2V2Q5              	100.00%
                    	       		H2SD86              	11.76%
Bootstrap support for Q5JET4 as seed ortholog is 100%.
Bootstrap support for H2V2Q5 as seed ortholog is 100%.

Group of orthologs #44. Best score 276 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:276 T.rubripes:81

Q5JFM0              	100.00%		H2TMF1              	100.00%
                    	       		H2U9T6              	76.35%
Bootstrap support for Q5JFM0 as seed ortholog is 100%.
Bootstrap support for H2TMF1 as seed ortholog is 98%.

Group of orthologs #45. Best score 274 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:274 T.rubripes:274

Q5JEY0              	100.00%		H2U821              	100.00%
Bootstrap support for Q5JEY0 as seed ortholog is 100%.
Bootstrap support for H2U821 as seed ortholog is 100%.

Group of orthologs #46. Best score 273 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:273 T.rubripes:131

Q5JHX1              	100.00%		H2T819              	100.00%
Bootstrap support for Q5JHX1 as seed ortholog is 100%.
Bootstrap support for H2T819 as seed ortholog is 99%.

Group of orthologs #47. Best score 270 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 T.rubripes:81

Q5JEZ2              	100.00%		H2TGU6              	100.00%
                    	       		H2SQ52              	38.93%
Bootstrap support for Q5JEZ2 as seed ortholog is 99%.
Bootstrap support for H2TGU6 as seed ortholog is 99%.

Group of orthologs #48. Best score 270 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:126 T.rubripes:270

Q5JHX4              	100.00%		H2V0J4              	100.00%
                    	       		H2T574              	38.68%
Bootstrap support for Q5JHX4 as seed ortholog is 99%.
Bootstrap support for H2V0J4 as seed ortholog is 100%.

Group of orthologs #49. Best score 262 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:262 T.rubripes:190

Q5JGN0              	100.00%		H2U529              	100.00%
Bootstrap support for Q5JGN0 as seed ortholog is 100%.
Bootstrap support for H2U529 as seed ortholog is 100%.

Group of orthologs #50. Best score 259 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:259 T.rubripes:212

Q5JF43              	100.00%		H2TSE3              	100.00%
Bootstrap support for Q5JF43 as seed ortholog is 100%.
Bootstrap support for H2TSE3 as seed ortholog is 100%.

Group of orthologs #51. Best score 258 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:199 T.rubripes:90

Q52428              	100.00%		H2TDG2              	100.00%
Bootstrap support for Q52428 as seed ortholog is 100%.
Bootstrap support for H2TDG2 as seed ortholog is 98%.

Group of orthologs #52. Best score 256 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:256 T.rubripes:21

Q5JFZ6              	100.00%		H2TWV1              	100.00%
                    	       		H2SMS0              	48.78%
                    	       		H2RXZ9              	46.17%
Bootstrap support for Q5JFZ6 as seed ortholog is 100%.
Bootstrap support for H2TWV1 as seed ortholog is 69%.
Alternative seed ortholog is H2UFU0 (21 bits away from this cluster)

Group of orthologs #53. Best score 256 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:153 T.rubripes:256

Q5JI16              	100.00%		H2TY28              	100.00%
Bootstrap support for Q5JI16 as seed ortholog is 99%.
Bootstrap support for H2TY28 as seed ortholog is 100%.

Group of orthologs #54. Best score 255 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:255 T.rubripes:181

Q5JJE8              	100.00%		H2SDK7              	100.00%
Bootstrap support for Q5JJE8 as seed ortholog is 100%.
Bootstrap support for H2SDK7 as seed ortholog is 100%.

Group of orthologs #55. Best score 252 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:252 T.rubripes:252

O59650              	100.00%		H2S9M4              	100.00%
                    	       		H2RKQ7              	80.81%
Bootstrap support for O59650 as seed ortholog is 100%.
Bootstrap support for H2S9M4 as seed ortholog is 100%.

Group of orthologs #56. Best score 249 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:249 T.rubripes:249

Q5JI40              	100.00%		H2TDY4              	100.00%
Bootstrap support for Q5JI40 as seed ortholog is 100%.
Bootstrap support for H2TDY4 as seed ortholog is 100%.

Group of orthologs #57. Best score 248 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:248 T.rubripes:41

Q5JJ64              	100.00%		H2SCC1              	100.00%
                    	       		H2V9I4              	100.00%
                    	       		H2UBY9              	73.08%
                    	       		H2TG60              	46.23%
                    	       		H2S3T9              	44.86%
                    	       		H2SWJ0              	16.95%
Bootstrap support for Q5JJ64 as seed ortholog is 100%.
Bootstrap support for H2SCC1 as seed ortholog is 83%.
Bootstrap support for H2V9I4 as seed ortholog is 84%.

Group of orthologs #58. Best score 248 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:248 T.rubripes:248

Q5JGK6              	100.00%		H2RQE4              	100.00%
Bootstrap support for Q5JGK6 as seed ortholog is 100%.
Bootstrap support for H2RQE4 as seed ortholog is 100%.

Group of orthologs #59. Best score 248 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:248 T.rubripes:248

Q5JHC6              	100.00%		H2V3D5              	100.00%
Bootstrap support for Q5JHC6 as seed ortholog is 100%.
Bootstrap support for H2V3D5 as seed ortholog is 100%.

Group of orthologs #60. Best score 242 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:91 T.rubripes:116

Q5JCX7              	100.00%		H2SMY8              	100.00%
                    	       		H2UJH4              	52.13%
Bootstrap support for Q5JCX7 as seed ortholog is 99%.
Bootstrap support for H2SMY8 as seed ortholog is 100%.

Group of orthologs #61. Best score 240 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:240 T.rubripes:240

Q5JE24              	100.00%		H2SSS8              	100.00%
                    	       		H2SPY9              	9.19%
Bootstrap support for Q5JE24 as seed ortholog is 100%.
Bootstrap support for H2SSS8 as seed ortholog is 100%.

Group of orthologs #62. Best score 228 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:228 T.rubripes:228

Q5JDJ5              	100.00%		H2U7X5              	100.00%
Bootstrap support for Q5JDJ5 as seed ortholog is 100%.
Bootstrap support for H2U7X5 as seed ortholog is 100%.

Group of orthologs #63. Best score 227 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:227 T.rubripes:227

Q76KA7              	100.00%		H2TGM2              	100.00%
Bootstrap support for Q76KA7 as seed ortholog is 100%.
Bootstrap support for H2TGM2 as seed ortholog is 100%.

Group of orthologs #64. Best score 226 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:226 T.rubripes:226

Q5JGQ7              	100.00%		H2RTJ2              	100.00%
                    	       		H2TJR7              	39.47%
Bootstrap support for Q5JGQ7 as seed ortholog is 100%.
Bootstrap support for H2RTJ2 as seed ortholog is 100%.

Group of orthologs #65. Best score 222 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:222 T.rubripes:43

Q5JG59              	100.00%		H2TXN8              	100.00%
                    	       		H2T8G6              	7.66%
                    	       		H2V8Z1              	6.84%
                    	       		H2UWM8              	6.70%
                    	       		H2SQT5              	5.47%
Bootstrap support for Q5JG59 as seed ortholog is 100%.
Bootstrap support for H2TXN8 as seed ortholog is 82%.

Group of orthologs #66. Best score 222 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:222 T.rubripes:222

Q5JD37              	100.00%		H2SNL2              	100.00%
                    	       		H2T649              	62.77%
Bootstrap support for Q5JD37 as seed ortholog is 100%.
Bootstrap support for H2SNL2 as seed ortholog is 100%.

Group of orthologs #67. Best score 222 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:222 T.rubripes:146

Q5JFW3              	100.00%		H2TK85              	100.00%
Bootstrap support for Q5JFW3 as seed ortholog is 100%.
Bootstrap support for H2TK85 as seed ortholog is 99%.

Group of orthologs #68. Best score 217 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:217 T.rubripes:217

Q5JF74              	100.00%		H2SWN9              	100.00%
Bootstrap support for Q5JF74 as seed ortholog is 100%.
Bootstrap support for H2SWN9 as seed ortholog is 100%.

Group of orthologs #69. Best score 216 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:216 T.rubripes:150

Q5JDH2              	100.00%		H2UFK7              	100.00%
Bootstrap support for Q5JDH2 as seed ortholog is 100%.
Bootstrap support for H2UFK7 as seed ortholog is 100%.

Group of orthologs #70. Best score 215 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:171 T.rubripes:215

Q5JH24              	100.00%		H2SLJ0              	100.00%
                    	       		H2UF31              	11.79%
Bootstrap support for Q5JH24 as seed ortholog is 99%.
Bootstrap support for H2SLJ0 as seed ortholog is 100%.

Group of orthologs #71. Best score 212 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:212 T.rubripes:212

Q76KA8              	100.00%		H2TQ63              	100.00%
Bootstrap support for Q76KA8 as seed ortholog is 100%.
Bootstrap support for H2TQ63 as seed ortholog is 100%.

Group of orthologs #72. Best score 212 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:212 T.rubripes:108

Q5JHC1              	100.00%		H2UCD0              	100.00%
Bootstrap support for Q5JHC1 as seed ortholog is 100%.
Bootstrap support for H2UCD0 as seed ortholog is 99%.

Group of orthologs #73. Best score 209 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:209 T.rubripes:137

Q5JGG6              	100.00%		H2TXV0              	100.00%
Q5JEW1              	13.60%		H2RNB0              	9.51%
                    	       		H2SLT9              	9.25%
Bootstrap support for Q5JGG6 as seed ortholog is 100%.
Bootstrap support for H2TXV0 as seed ortholog is 99%.

Group of orthologs #74. Best score 209 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:209 T.rubripes:209

Q5JFN1              	100.00%		H2SDJ0              	100.00%
Bootstrap support for Q5JFN1 as seed ortholog is 100%.
Bootstrap support for H2SDJ0 as seed ortholog is 100%.

Group of orthologs #75. Best score 208 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:208 T.rubripes:208

Q5JDJ0              	100.00%		H2STL6              	100.00%
                    	       		H2RJI8              	70.84%
Bootstrap support for Q5JDJ0 as seed ortholog is 100%.
Bootstrap support for H2STL6 as seed ortholog is 100%.

Group of orthologs #76. Best score 206 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:206 T.rubripes:206

Q6F494              	100.00%		H2T7A2              	100.00%
                    	       		H2SFB2              	58.49%
Bootstrap support for Q6F494 as seed ortholog is 100%.
Bootstrap support for H2T7A2 as seed ortholog is 100%.

Group of orthologs #77. Best score 204 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:204 T.rubripes:204

Q5JGG5              	100.00%		H2TG93              	100.00%
                    	       		H2V098              	56.56%
                    	       		H2SRS9              	37.33%
                    	       		H2S7P1              	36.83%
                    	       		H2SW79              	36.32%
                    	       		H2SXI8              	35.81%
                    	       		H2RWM5              	35.71%
Bootstrap support for Q5JGG5 as seed ortholog is 100%.
Bootstrap support for H2TG93 as seed ortholog is 100%.

Group of orthologs #78. Best score 204 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:58 T.rubripes:204

Q5JGG2              	100.00%		H2TZM1              	100.00%
Bootstrap support for Q5JGG2 as seed ortholog is 91%.
Bootstrap support for H2TZM1 as seed ortholog is 100%.

Group of orthologs #79. Best score 203 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:203 T.rubripes:132

Q5JGF4              	100.00%		H2S9W7              	100.00%
Bootstrap support for Q5JGF4 as seed ortholog is 100%.
Bootstrap support for H2S9W7 as seed ortholog is 99%.

Group of orthologs #80. Best score 203 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:203 T.rubripes:125

Q5JJ82              	100.00%		H2V9C5              	100.00%
Bootstrap support for Q5JJ82 as seed ortholog is 100%.
Bootstrap support for H2V9C5 as seed ortholog is 99%.

Group of orthologs #81. Best score 202 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:202 T.rubripes:161

Q5JFM8              	100.00%		H2RZM0              	100.00%
Bootstrap support for Q5JFM8 as seed ortholog is 100%.
Bootstrap support for H2RZM0 as seed ortholog is 99%.

Group of orthologs #82. Best score 202 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:202 T.rubripes:31

Q5JEP5              	100.00%		H2SRW8              	100.00%
Bootstrap support for Q5JEP5 as seed ortholog is 100%.
Bootstrap support for H2SRW8 as seed ortholog is 89%.

Group of orthologs #83. Best score 200 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:200 T.rubripes:200

Q5JID0              	100.00%		H2RMZ7              	100.00%
                    	       		H2T723              	37.98%
                    	       		H2S1S0              	35.02%
                    	       		H2S815              	31.57%
                    	       		H2RPC2              	31.57%
                    	       		H2U7Z2              	30.70%
                    	       		H2TTB9              	29.84%
                    	       		H2SMU9              	25.65%
                    	       		H2S2K3              	25.52%
                    	       		H2TS31              	22.56%
Bootstrap support for Q5JID0 as seed ortholog is 100%.
Bootstrap support for H2RMZ7 as seed ortholog is 100%.

Group of orthologs #84. Best score 197 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:197 T.rubripes:197

Q5JJ43              	100.00%		H2SJW2              	100.00%
Bootstrap support for Q5JJ43 as seed ortholog is 100%.
Bootstrap support for H2SJW2 as seed ortholog is 100%.

Group of orthologs #85. Best score 196 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:196 T.rubripes:196

Q5JGE1              	100.00%		H2SZG2              	100.00%
Bootstrap support for Q5JGE1 as seed ortholog is 100%.
Bootstrap support for H2SZG2 as seed ortholog is 100%.

Group of orthologs #86. Best score 195 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:195 T.rubripes:60

Q5JE76              	100.00%		H2TK57              	100.00%
                    	       		H2SWN0              	46.12%
                    	       		H2V8M7              	7.29%
                    	       		H2S5W7              	7.17%
                    	       		H2RJF6              	6.21%
                    	       		H2UWP5              	5.73%
Bootstrap support for Q5JE76 as seed ortholog is 100%.
Bootstrap support for H2TK57 as seed ortholog is 95%.

Group of orthologs #87. Best score 195 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:195 T.rubripes:195

Q5JH48              	100.00%		H2V5J5              	100.00%
Bootstrap support for Q5JH48 as seed ortholog is 100%.
Bootstrap support for H2V5J5 as seed ortholog is 100%.

Group of orthologs #88. Best score 194 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:194 T.rubripes:15

Q5JIU9              	100.00%		H2TBN4              	100.00%
Bootstrap support for Q5JIU9 as seed ortholog is 100%.
Bootstrap support for H2TBN4 as seed ortholog is 53%.
Alternative seed ortholog is H2V726 (15 bits away from this cluster)

Group of orthologs #89. Best score 193 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:127 T.rubripes:107

Q5JF51              	100.00%		H2VCW0              	100.00%
Q5JHU0              	26.37%		H2U5V1              	47.00%
Bootstrap support for Q5JF51 as seed ortholog is 99%.
Bootstrap support for H2VCW0 as seed ortholog is 99%.

Group of orthologs #90. Best score 193 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:193 T.rubripes:71

Q5JFN0              	100.00%		H2UQL9              	100.00%
                    	       		H2SI87              	18.90%
Bootstrap support for Q5JFN0 as seed ortholog is 100%.
Bootstrap support for H2UQL9 as seed ortholog is 99%.

Group of orthologs #91. Best score 192 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:192 T.rubripes:84

Q5JEK8              	100.00%		H2T404              	100.00%
Bootstrap support for Q5JEK8 as seed ortholog is 100%.
Bootstrap support for H2T404 as seed ortholog is 96%.

Group of orthologs #92. Best score 192 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:192 T.rubripes:192

Q5JIM2              	100.00%		P70076              	100.00%
Bootstrap support for Q5JIM2 as seed ortholog is 100%.
Bootstrap support for P70076 as seed ortholog is 100%.

Group of orthologs #93. Best score 190 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:190 T.rubripes:61

Q5JHT1              	100.00%		H2UTR2              	100.00%
                    	       		H2UTP5              	90.11%
                    	       		H2SHE4              	28.79%
Bootstrap support for Q5JHT1 as seed ortholog is 100%.
Bootstrap support for H2UTR2 as seed ortholog is 95%.

Group of orthologs #94. Best score 187 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:187 T.rubripes:106

Q5JIQ0              	100.00%		H2TBR2              	100.00%
Bootstrap support for Q5JIQ0 as seed ortholog is 100%.
Bootstrap support for H2TBR2 as seed ortholog is 99%.

Group of orthologs #95. Best score 186 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:186 T.rubripes:186

Q5JF06              	100.00%		H2SAC2              	100.00%
                    	       		H2S3L0              	52.26%
Bootstrap support for Q5JF06 as seed ortholog is 100%.
Bootstrap support for H2SAC2 as seed ortholog is 100%.

Group of orthologs #96. Best score 185 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:185 T.rubripes:185

Q5JFV8              	100.00%		H2U4N3              	100.00%
                    	       		H2UKV3              	17.58%
                    	       		H2UNL9              	14.74%
Bootstrap support for Q5JFV8 as seed ortholog is 100%.
Bootstrap support for H2U4N3 as seed ortholog is 100%.

Group of orthologs #97. Best score 185 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:75 T.rubripes:9

Q5JDD8              	100.00%		H2S6F4              	100.00%
Bootstrap support for Q5JDD8 as seed ortholog is 99%.
Bootstrap support for H2S6F4 as seed ortholog is 57%.
Alternative seed ortholog is H2UJQ1 (9 bits away from this cluster)

Group of orthologs #98. Best score 183 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:183 T.rubripes:183

Q5JIL7              	100.00%		H2RPT7              	100.00%
                    	       		H2U9V7              	34.69%
Bootstrap support for Q5JIL7 as seed ortholog is 100%.
Bootstrap support for H2RPT7 as seed ortholog is 100%.

Group of orthologs #99. Best score 182 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:182 T.rubripes:109

Q5JF38              	100.00%		H2RQI7              	100.00%
Bootstrap support for Q5JF38 as seed ortholog is 100%.
Bootstrap support for H2RQI7 as seed ortholog is 99%.

Group of orthologs #100. Best score 181 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:181 T.rubripes:107

Q5JDV8              	100.00%		H2UWQ7              	100.00%
Q5JIM8              	7.50%		
Bootstrap support for Q5JDV8 as seed ortholog is 100%.
Bootstrap support for H2UWQ7 as seed ortholog is 99%.

Group of orthologs #101. Best score 180 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:180 T.rubripes:58

Q5JIR6              	100.00%		H2TS96              	100.00%
Bootstrap support for Q5JIR6 as seed ortholog is 100%.
Bootstrap support for H2TS96 as seed ortholog is 97%.

Group of orthologs #102. Best score 178 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:178 T.rubripes:178

P77933              	100.00%		H2SW10              	100.00%
                    	       		H2S107              	10.97%
Bootstrap support for P77933 as seed ortholog is 100%.
Bootstrap support for H2SW10 as seed ortholog is 100%.

Group of orthologs #103. Best score 178 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:178 T.rubripes:69

Q5JG47              	100.00%		H2U3N7              	100.00%
Bootstrap support for Q5JG47 as seed ortholog is 100%.
Bootstrap support for H2U3N7 as seed ortholog is 97%.

Group of orthologs #104. Best score 177 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:177 T.rubripes:73

Q5JGD1              	100.00%		H2UN41              	100.00%
                    	       		H2V2J3              	70.98%
Bootstrap support for Q5JGD1 as seed ortholog is 100%.
Bootstrap support for H2UN41 as seed ortholog is 97%.

Group of orthologs #105. Best score 177 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:177 T.rubripes:30

Q5JIB3              	100.00%		H2RZG9              	100.00%
Bootstrap support for Q5JIB3 as seed ortholog is 100%.
Bootstrap support for H2RZG9 as seed ortholog is 73%.
Alternative seed ortholog is H2TQN6 (30 bits away from this cluster)

Group of orthologs #106. Best score 177 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:177 T.rubripes:177

Q5JH43              	100.00%		H2TCD8              	100.00%
Bootstrap support for Q5JH43 as seed ortholog is 100%.
Bootstrap support for H2TCD8 as seed ortholog is 100%.

Group of orthologs #107. Best score 176 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:176 T.rubripes:176

Q5JFE7              	100.00%		H2TI80              	100.00%
Bootstrap support for Q5JFE7 as seed ortholog is 100%.
Bootstrap support for H2TI80 as seed ortholog is 100%.

Group of orthologs #108. Best score 175 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:175 T.rubripes:175

Q5JDV2              	100.00%		H2T1R1              	100.00%
                    	       		H2TGQ0              	32.15%
Bootstrap support for Q5JDV2 as seed ortholog is 100%.
Bootstrap support for H2T1R1 as seed ortholog is 100%.

Group of orthologs #109. Best score 175 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:175 T.rubripes:175

Q5JJF3              	100.00%		H2T170              	100.00%
Bootstrap support for Q5JJF3 as seed ortholog is 100%.
Bootstrap support for H2T170 as seed ortholog is 100%.

Group of orthologs #110. Best score 173 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:173 T.rubripes:173

Q5JIG7              	100.00%		H2SMR8              	100.00%
Bootstrap support for Q5JIG7 as seed ortholog is 100%.
Bootstrap support for H2SMR8 as seed ortholog is 100%.

Group of orthologs #111. Best score 170 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:170 T.rubripes:110

Q5JGN1              	100.00%		H2RYC8              	100.00%
P58109              	57.93%		
Bootstrap support for Q5JGN1 as seed ortholog is 100%.
Bootstrap support for H2RYC8 as seed ortholog is 99%.

Group of orthologs #112. Best score 170 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:107 T.rubripes:28

Q5JE21              	100.00%		H2SMI4              	100.00%
Bootstrap support for Q5JE21 as seed ortholog is 99%.
Bootstrap support for H2SMI4 as seed ortholog is 72%.
Alternative seed ortholog is H2TVB7 (28 bits away from this cluster)

Group of orthologs #113. Best score 170 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:170 T.rubripes:170

Q5JG03              	100.00%		H2UIM4              	100.00%
Bootstrap support for Q5JG03 as seed ortholog is 100%.
Bootstrap support for H2UIM4 as seed ortholog is 100%.

Group of orthologs #114. Best score 168 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:168 T.rubripes:168

Q5JDG3              	100.00%		H2TCG8              	100.00%
Bootstrap support for Q5JDG3 as seed ortholog is 100%.
Bootstrap support for H2TCG8 as seed ortholog is 100%.

Group of orthologs #115. Best score 165 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:165 T.rubripes:96

Q5JFW9              	100.00%		H2TJ59              	100.00%
                    	       		H2UA73              	56.70%
Bootstrap support for Q5JFW9 as seed ortholog is 100%.
Bootstrap support for H2TJ59 as seed ortholog is 99%.

Group of orthologs #116. Best score 165 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:93 T.rubripes:165

Q5JEW7              	100.00%		H2T814              	100.00%
Bootstrap support for Q5JEW7 as seed ortholog is 99%.
Bootstrap support for H2T814 as seed ortholog is 100%.

Group of orthologs #117. Best score 164 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:164 T.rubripes:96

Q5JEQ6              	100.00%		H2SA69              	100.00%
Q5JJB8              	23.18%		
Bootstrap support for Q5JEQ6 as seed ortholog is 100%.
Bootstrap support for H2SA69 as seed ortholog is 99%.

Group of orthologs #118. Best score 164 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:164 T.rubripes:164

Q5JFX8              	100.00%		H2V735              	100.00%
Bootstrap support for Q5JFX8 as seed ortholog is 100%.
Bootstrap support for H2V735 as seed ortholog is 100%.

Group of orthologs #119. Best score 163 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:163 T.rubripes:14

Q5JIR7              	100.00%		H2SBH9              	100.00%
Bootstrap support for Q5JIR7 as seed ortholog is 100%.
Bootstrap support for H2SBH9 as seed ortholog is 68%.
Alternative seed ortholog is H2T827 (14 bits away from this cluster)

Group of orthologs #120. Best score 163 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:163 T.rubripes:163

Q5JHN5              	100.00%		H2T5J0              	100.00%
Bootstrap support for Q5JHN5 as seed ortholog is 100%.
Bootstrap support for H2T5J0 as seed ortholog is 100%.

Group of orthologs #121. Best score 163 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:163 T.rubripes:9

Q9HHC4              	100.00%		H2TKB5              	100.00%
Bootstrap support for Q9HHC4 as seed ortholog is 100%.
Bootstrap support for H2TKB5 as seed ortholog is 57%.
Alternative seed ortholog is H2TRP4 (9 bits away from this cluster)

Group of orthologs #122. Best score 160 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:160 T.rubripes:75

Q5JI54              	100.00%		H2TCD9              	100.00%
Bootstrap support for Q5JI54 as seed ortholog is 100%.
Bootstrap support for H2TCD9 as seed ortholog is 98%.

Group of orthologs #123. Best score 159 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:159 T.rubripes:159

Q5JIE6              	100.00%		H2UD20              	100.00%
                    	       		H2RQH1              	68.78%
                    	       		H2S3P4              	48.35%
Bootstrap support for Q5JIE6 as seed ortholog is 100%.
Bootstrap support for H2UD20 as seed ortholog is 100%.

Group of orthologs #124. Best score 159 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:159 T.rubripes:159

Q5JJG1              	100.00%		H2SGK1              	100.00%
Bootstrap support for Q5JJG1 as seed ortholog is 100%.
Bootstrap support for H2SGK1 as seed ortholog is 100%.

Group of orthologs #125. Best score 159 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:159 T.rubripes:159

Q5JGH7              	100.00%		H2V8R4              	100.00%
Bootstrap support for Q5JGH7 as seed ortholog is 100%.
Bootstrap support for H2V8R4 as seed ortholog is 100%.

Group of orthologs #126. Best score 158 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:158 T.rubripes:36

Q5JF69              	100.00%		H2T042              	100.00%
                    	       		H2UTG5              	28.51%
                    	       		H2RNC1              	26.46%
                    	       		H2SHG1              	26.46%
                    	       		H2SDC6              	24.98%
                    	       		H2UHZ7              	21.55%
                    	       		H2RXJ2              	15.04%
                    	       		H2SQX5              	13.35%
Bootstrap support for Q5JF69 as seed ortholog is 100%.
Bootstrap support for H2T042 as seed ortholog is 81%.

Group of orthologs #127. Best score 158 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:158 T.rubripes:158

Q5JCX3              	100.00%		H2SI84              	100.00%
Bootstrap support for Q5JCX3 as seed ortholog is 100%.
Bootstrap support for H2SI84 as seed ortholog is 100%.

Group of orthologs #128. Best score 158 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:158 T.rubripes:158

Q5JDI0              	100.00%		H2UKK3              	100.00%
Bootstrap support for Q5JDI0 as seed ortholog is 100%.
Bootstrap support for H2UKK3 as seed ortholog is 100%.

Group of orthologs #129. Best score 157 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:157 T.rubripes:157

Q5JIW4              	100.00%		H2S089              	100.00%
Q5JI77              	5.93%		
Bootstrap support for Q5JIW4 as seed ortholog is 100%.
Bootstrap support for H2S089 as seed ortholog is 100%.

Group of orthologs #130. Best score 157 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:157 T.rubripes:157

Q5JJD2              	100.00%		H2SEM4              	100.00%
Bootstrap support for Q5JJD2 as seed ortholog is 100%.
Bootstrap support for H2SEM4 as seed ortholog is 100%.

Group of orthologs #131. Best score 155 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:48 T.rubripes:91

Q5JI97              	100.00%		H2SLH0              	100.00%
                    	       		H2TH32              	7.38%
Bootstrap support for Q5JI97 as seed ortholog is 85%.
Bootstrap support for H2SLH0 as seed ortholog is 98%.

Group of orthologs #132. Best score 155 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:155 T.rubripes:155

Q5JE04              	100.00%		H2RSR8              	100.00%
Bootstrap support for Q5JE04 as seed ortholog is 100%.
Bootstrap support for H2RSR8 as seed ortholog is 100%.

Group of orthologs #133. Best score 154 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:154 T.rubripes:154

Q5JHS7              	100.00%		H2TW71              	100.00%
Bootstrap support for Q5JHS7 as seed ortholog is 100%.
Bootstrap support for H2TW71 as seed ortholog is 100%.

Group of orthologs #134. Best score 154 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:154 T.rubripes:154

Q5JDV1              	100.00%		H2UYK4              	100.00%
Bootstrap support for Q5JDV1 as seed ortholog is 100%.
Bootstrap support for H2UYK4 as seed ortholog is 100%.

Group of orthologs #135. Best score 153 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:153 T.rubripes:48

Q5JH68              	100.00%		H2TQ17              	100.00%
                    	       		H2VE60              	33.89%
Bootstrap support for Q5JH68 as seed ortholog is 100%.
Bootstrap support for H2TQ17 as seed ortholog is 93%.

Group of orthologs #136. Best score 153 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:153 T.rubripes:153

Q5JJG8              	100.00%		H2SWH7              	100.00%
Bootstrap support for Q5JJG8 as seed ortholog is 100%.
Bootstrap support for H2SWH7 as seed ortholog is 100%.

Group of orthologs #137. Best score 152 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:152 T.rubripes:152

Q5JFR0              	100.00%		H2RUI0              	100.00%
Bootstrap support for Q5JFR0 as seed ortholog is 100%.
Bootstrap support for H2RUI0 as seed ortholog is 100%.

Group of orthologs #138. Best score 150 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:150 T.rubripes:26

Q5JIH2              	100.00%		H2VA88              	100.00%
Bootstrap support for Q5JIH2 as seed ortholog is 100%.
Bootstrap support for H2VA88 as seed ortholog is 56%.
Alternative seed ortholog is H2SRN1 (26 bits away from this cluster)

Group of orthologs #139. Best score 149 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:149 T.rubripes:149

Q5JJG0              	100.00%		H2T6H0              	100.00%
Bootstrap support for Q5JJG0 as seed ortholog is 100%.
Bootstrap support for H2T6H0 as seed ortholog is 100%.

Group of orthologs #140. Best score 149 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:149 T.rubripes:83

Q5JFG9              	100.00%		H2U339              	100.00%
Bootstrap support for Q5JFG9 as seed ortholog is 100%.
Bootstrap support for H2U339 as seed ortholog is 99%.

Group of orthologs #141. Best score 148 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:32 T.rubripes:148

Q5JIN8              	100.00%		H2S080              	100.00%
Q5JDQ2              	29.08%		
Q5JCX0              	29.08%		
Q5JIB0              	28.19%		
Q5JDD3              	11.41%		
Q5JG70              	9.84%		
Q5JDA7              	8.95%		
Q5JIG9              	8.50%		
Bootstrap support for Q5JIN8 as seed ortholog is 82%.
Bootstrap support for H2S080 as seed ortholog is 100%.

Group of orthologs #142. Best score 148 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:148 T.rubripes:71

Q5JJ45              	100.00%		H2V259              	100.00%
                    	       		H2V0P2              	25.88%
Bootstrap support for Q5JJ45 as seed ortholog is 100%.
Bootstrap support for H2V259 as seed ortholog is 99%.

Group of orthologs #143. Best score 148 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:148 T.rubripes:66

Q5JFK1              	100.00%		H2U634              	100.00%
Bootstrap support for Q5JFK1 as seed ortholog is 100%.
Bootstrap support for H2U634 as seed ortholog is 97%.

Group of orthologs #144. Best score 146 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:146 T.rubripes:146

Q5JH96              	100.00%		H2T012              	100.00%
                    	       		H2UNJ8              	5.29%
Bootstrap support for Q5JH96 as seed ortholog is 100%.
Bootstrap support for H2T012 as seed ortholog is 100%.

Group of orthologs #145. Best score 146 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:39 T.rubripes:106

Q5JIG1              	100.00%		H2TXW4              	100.00%
Bootstrap support for Q5JIG1 as seed ortholog is 91%.
Bootstrap support for H2TXW4 as seed ortholog is 99%.

Group of orthologs #146. Best score 146 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:146 T.rubripes:44

Q5JI69              	100.00%		H2V504              	100.00%
Bootstrap support for Q5JI69 as seed ortholog is 100%.
Bootstrap support for H2V504 as seed ortholog is 84%.

Group of orthologs #147. Best score 145 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:145 T.rubripes:76

Q5JFG2              	100.00%		H2TGG3              	100.00%
Q5JFG7              	54.50%		
Bootstrap support for Q5JFG2 as seed ortholog is 100%.
Bootstrap support for H2TGG3 as seed ortholog is 89%.

Group of orthologs #148. Best score 144 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:144 T.rubripes:68

Q5JGR7              	100.00%		H2SQ34              	100.00%
                    	       		H2RP06              	33.75%
                    	       		H2SGD2              	30.00%
                    	       		H2SJJ0              	16.25%
Bootstrap support for Q5JGR7 as seed ortholog is 100%.
Bootstrap support for H2SQ34 as seed ortholog is 99%.

Group of orthologs #149. Best score 144 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:144 T.rubripes:144

Q5JGC8              	100.00%		H2RZC5              	100.00%
                    	       		H2S6G0              	68.46%
                    	       		H2UN28              	39.59%
Bootstrap support for Q5JGC8 as seed ortholog is 100%.
Bootstrap support for H2RZC5 as seed ortholog is 100%.

Group of orthologs #150. Best score 143 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:143 T.rubripes:143

Q5JDR5              	100.00%		H2U1Y4              	100.00%
                    	       		H2V4T0              	32.49%
Bootstrap support for Q5JDR5 as seed ortholog is 100%.
Bootstrap support for H2U1Y4 as seed ortholog is 100%.

Group of orthologs #151. Best score 143 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:143 T.rubripes:143

Q5JDH3              	100.00%		H2TID9              	100.00%
Bootstrap support for Q5JDH3 as seed ortholog is 100%.
Bootstrap support for H2TID9 as seed ortholog is 100%.

Group of orthologs #152. Best score 143 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:143 T.rubripes:102

Q5JF63              	100.00%		H2UGK5              	100.00%
Bootstrap support for Q5JF63 as seed ortholog is 100%.
Bootstrap support for H2UGK5 as seed ortholog is 99%.

Group of orthologs #153. Best score 142 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:142 T.rubripes:142

Q5JIF4              	100.00%		H2SVT9              	100.00%
Bootstrap support for Q5JIF4 as seed ortholog is 100%.
Bootstrap support for H2SVT9 as seed ortholog is 100%.

Group of orthologs #154. Best score 141 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:141 T.rubripes:141

Q5JEZ9              	100.00%		H2T6Q7              	100.00%
Q5JH45              	100.00%		H2SYI9              	100.00%
                    	       		H2S548              	25.10%
                    	       		H2S8Y0              	22.18%
                    	       		H2STX6              	21.64%
                    	       		H2TQ14              	16.02%
                    	       		H2TDD8              	7.64%
                    	       		H2TBY5              	5.56%
Bootstrap support for Q5JEZ9 as seed ortholog is 100%.
Bootstrap support for Q5JH45 as seed ortholog is 100%.
Bootstrap support for H2T6Q7 as seed ortholog is 100%.
Bootstrap support for H2SYI9 as seed ortholog is 100%.

Group of orthologs #155. Best score 141 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:141 T.rubripes:68

Q5JH36              	100.00%		H2UUC0              	100.00%
Bootstrap support for Q5JH36 as seed ortholog is 100%.
Bootstrap support for H2UUC0 as seed ortholog is 98%.

Group of orthologs #156. Best score 140 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:140 T.rubripes:140

Q5JGB4              	100.00%		H2TU48              	100.00%
Bootstrap support for Q5JGB4 as seed ortholog is 100%.
Bootstrap support for H2TU48 as seed ortholog is 100%.

Group of orthologs #157. Best score 139 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:139 T.rubripes:139

Q5JDH5              	100.00%		H2SQQ0              	100.00%
Bootstrap support for Q5JDH5 as seed ortholog is 100%.
Bootstrap support for H2SQQ0 as seed ortholog is 100%.

Group of orthologs #158. Best score 139 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:139 T.rubripes:139

Q5JIB9              	100.00%		H2SP26              	100.00%
Bootstrap support for Q5JIB9 as seed ortholog is 100%.
Bootstrap support for H2SP26 as seed ortholog is 100%.

Group of orthologs #159. Best score 139 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:139 T.rubripes:139

Q5JGJ4              	100.00%		H2UMT6              	100.00%
Bootstrap support for Q5JGJ4 as seed ortholog is 100%.
Bootstrap support for H2UMT6 as seed ortholog is 100%.

Group of orthologs #160. Best score 138 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:138 T.rubripes:138

Q5JDI4              	100.00%		H2SYT1              	100.00%
Bootstrap support for Q5JDI4 as seed ortholog is 100%.
Bootstrap support for H2SYT1 as seed ortholog is 100%.

Group of orthologs #161. Best score 136 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:136 T.rubripes:136

Q5JJG6              	100.00%		H2TZ30              	100.00%
Bootstrap support for Q5JJG6 as seed ortholog is 100%.
Bootstrap support for H2TZ30 as seed ortholog is 100%.

Group of orthologs #162. Best score 135 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:135 T.rubripes:135

Q5JJF1              	100.00%		H2UB41              	100.00%
Bootstrap support for Q5JJF1 as seed ortholog is 100%.
Bootstrap support for H2UB41 as seed ortholog is 100%.

Group of orthologs #163. Best score 134 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:134 T.rubripes:134

Q5JDP5              	100.00%		H2V8F8              	100.00%
Q5JDB4              	9.29%		
Bootstrap support for Q5JDP5 as seed ortholog is 100%.
Bootstrap support for H2V8F8 as seed ortholog is 100%.

Group of orthologs #164. Best score 134 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:134 T.rubripes:54

Q5JEX2              	100.00%		H2TAT4              	100.00%
Bootstrap support for Q5JEX2 as seed ortholog is 100%.
Bootstrap support for H2TAT4 as seed ortholog is 99%.

Group of orthologs #165. Best score 134 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:134 T.rubripes:134

Q5JJG4              	100.00%		H2TEV3              	100.00%
Bootstrap support for Q5JJG4 as seed ortholog is 100%.
Bootstrap support for H2TEV3 as seed ortholog is 100%.

Group of orthologs #166. Best score 134 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:134 T.rubripes:134

Q5JE70              	100.00%		H2U8I3              	100.00%
Bootstrap support for Q5JE70 as seed ortholog is 100%.
Bootstrap support for H2U8I3 as seed ortholog is 100%.

Group of orthologs #167. Best score 133 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:133 T.rubripes:133

Q5JJG3              	100.00%		H2U053              	100.00%
Bootstrap support for Q5JJG3 as seed ortholog is 100%.
Bootstrap support for H2U053 as seed ortholog is 100%.

Group of orthologs #168. Best score 132 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:132 T.rubripes:51

Q5JCY9              	100.00%		H2TYJ5              	100.00%
Q5JI15              	13.16%		
Bootstrap support for Q5JCY9 as seed ortholog is 100%.
Bootstrap support for H2TYJ5 as seed ortholog is 88%.

Group of orthologs #169. Best score 129 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:129 T.rubripes:129

Q5JDK2              	100.00%		H2UUZ3              	100.00%
                    	       		H2RMJ1              	34.93%
                    	       		H2U5Y0              	27.87%
                    	       		H2TS04              	27.20%
                    	       		H2SL71              	26.87%
                    	       		H2SBB6              	26.53%
                    	       		H2TJP2              	25.80%
                    	       		H2UKU9              	25.67%
                    	       		H2T644              	25.47%
                    	       		H2RL80              	25.47%
                    	       		H2UF89              	25.40%
                    	       		H2S5Y8              	24.73%
                    	       		H2TCM5              	24.07%
                    	       		H2RL74              	23.93%
                    	       		H2U120              	23.67%
                    	       		H2SFS4              	23.53%
                    	       		H2UNR1              	22.87%
                    	       		H2SPI6              	22.73%
                    	       		H2S405              	22.60%
                    	       		H2UQ59              	22.47%
                    	       		H2S3B4              	21.80%
                    	       		H2T4U0              	21.13%
                    	       		H2RYX2              	20.40%
                    	       		H2S5R6              	20.27%
                    	       		H2UT23              	20.27%
                    	       		H2RYD4              	20.20%
                    	       		H2USA0              	20.00%
                    	       		H2S5Y4              	18.80%
                    	       		H2U3E3              	18.27%
                    	       		H2TT77              	18.20%
                    	       		H2T4N5              	17.47%
                    	       		H2SKA2              	17.20%
                    	       		H2UWK5              	16.87%
                    	       		H2UJW5              	16.53%
                    	       		H2T1A7              	15.80%
                    	       		H2SBM3              	9.73%
                    	       		H2RS14              	9.00%
Bootstrap support for Q5JDK2 as seed ortholog is 100%.
Bootstrap support for H2UUZ3 as seed ortholog is 100%.

Group of orthologs #170. Best score 129 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:129 T.rubripes:129

Q5JF27              	100.00%		H2S1R4              	100.00%
Q5JFZ0              	10.17%		H2RRL9              	78.67%
                    	       		H2RSR9              	58.12%
                    	       		H2RZX8              	54.48%
Bootstrap support for Q5JF27 as seed ortholog is 100%.
Bootstrap support for H2S1R4 as seed ortholog is 100%.

Group of orthologs #171. Best score 129 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:37 T.rubripes:13

Q5JHE3              	100.00%		H2RWM3              	100.00%
                    	       		H2VC78              	95.91%
                    	       		H2TDB8              	85.82%
Bootstrap support for Q5JHE3 as seed ortholog is 87%.
Bootstrap support for H2RWM3 as seed ortholog is 65%.
Alternative seed ortholog is H2UZ17 (13 bits away from this cluster)

Group of orthologs #172. Best score 129 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:129 T.rubripes:129

Q5JHP2              	100.00%		H2RJE4              	100.00%
Bootstrap support for Q5JHP2 as seed ortholog is 100%.
Bootstrap support for H2RJE4 as seed ortholog is 100%.

Group of orthologs #173. Best score 129 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:79 T.rubripes:16

Q5JF30              	100.00%		H2TA57              	100.00%
Bootstrap support for Q5JF30 as seed ortholog is 99%.
Bootstrap support for H2TA57 as seed ortholog is 71%.
Alternative seed ortholog is H2SYI2 (16 bits away from this cluster)

Group of orthologs #174. Best score 129 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:129 T.rubripes:129

Q5JJF8              	100.00%		H2U7C4              	100.00%
Bootstrap support for Q5JJF8 as seed ortholog is 100%.
Bootstrap support for H2U7C4 as seed ortholog is 100%.

Group of orthologs #175. Best score 128 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:128 T.rubripes:128

Q5JDV9              	100.00%		H2SIL8              	100.00%
Bootstrap support for Q5JDV9 as seed ortholog is 100%.
Bootstrap support for H2SIL8 as seed ortholog is 100%.

Group of orthologs #176. Best score 126 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:126 T.rubripes:126

Q5JJ59              	100.00%		H2T4F3              	100.00%
Q5JID9              	5.93%		
Bootstrap support for Q5JJ59 as seed ortholog is 100%.
Bootstrap support for H2T4F3 as seed ortholog is 100%.

Group of orthologs #177. Best score 125 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:125 T.rubripes:125

Q5JHF7              	100.00%		H2UCA1              	100.00%
Q5JE68              	35.88%		H2T6Y7              	17.40%
Bootstrap support for Q5JHF7 as seed ortholog is 100%.
Bootstrap support for H2UCA1 as seed ortholog is 100%.

Group of orthologs #178. Best score 124 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:9 T.rubripes:124

Q5JGG0              	100.00%		H2S712              	100.00%
Bootstrap support for Q5JGG0 as seed ortholog is 66%.
Alternative seed ortholog is Q5JHU7 (9 bits away from this cluster)
Bootstrap support for H2S712 as seed ortholog is 100%.

Group of orthologs #179. Best score 124 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:124 T.rubripes:30

Q5JIE4              	100.00%		H2SDY8              	100.00%
Bootstrap support for Q5JIE4 as seed ortholog is 100%.
Bootstrap support for H2SDY8 as seed ortholog is 77%.

Group of orthologs #180. Best score 123 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:123 T.rubripes:123

Q5JIA2              	100.00%		H2SM67              	100.00%
Bootstrap support for Q5JIA2 as seed ortholog is 100%.
Bootstrap support for H2SM67 as seed ortholog is 100%.

Group of orthologs #181. Best score 123 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:123 T.rubripes:63

Q5JIE9              	100.00%		H2TH79              	100.00%
Bootstrap support for Q5JIE9 as seed ortholog is 100%.
Bootstrap support for H2TH79 as seed ortholog is 96%.

Group of orthologs #182. Best score 121 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:121 T.rubripes:121

Q5JEM6              	100.00%		H2V5N3              	100.00%
Bootstrap support for Q5JEM6 as seed ortholog is 100%.
Bootstrap support for H2V5N3 as seed ortholog is 100%.

Group of orthologs #183. Best score 120 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:120 T.rubripes:120

Q52366              	100.00%		H2SZ73              	100.00%
                    	       		Q6SJ94              	46.14%
Bootstrap support for Q52366 as seed ortholog is 100%.
Bootstrap support for H2SZ73 as seed ortholog is 100%.

Group of orthologs #184. Best score 120 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:65 T.rubripes:31

Q5JEU9              	100.00%		H2TUV9              	100.00%
                    	       		H2SD88              	10.57%
Bootstrap support for Q5JEU9 as seed ortholog is 96%.
Bootstrap support for H2TUV9 as seed ortholog is 78%.

Group of orthologs #185. Best score 119 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:119 T.rubripes:37

Q5JJC6              	100.00%		H2UNX7              	100.00%
Bootstrap support for Q5JJC6 as seed ortholog is 100%.
Bootstrap support for H2UNX7 as seed ortholog is 94%.

Group of orthologs #186. Best score 118 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:118 T.rubripes:118

O52958              	100.00%		H2TMA8              	100.00%
                    	       		H2UFJ0              	89.35%
                    	       		H2U9E3              	28.90%
                    	       		H2S547              	25.86%
Bootstrap support for O52958 as seed ortholog is 100%.
Bootstrap support for H2TMA8 as seed ortholog is 100%.

Group of orthologs #187. Best score 118 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:118 T.rubripes:118

Q5JDS2              	100.00%		H2UPV5              	100.00%
                    	       		H2SIU7              	88.54%
                    	       		H2SIZ2              	49.68%
                    	       		H2TBU8              	46.71%
Bootstrap support for Q5JDS2 as seed ortholog is 100%.
Bootstrap support for H2UPV5 as seed ortholog is 100%.

Group of orthologs #188. Best score 117 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:117 T.rubripes:117

Q5JH18              	100.00%		H2SV21              	100.00%
                    	       		H2UAU5              	79.54%
                    	       		H2T3Z8              	72.84%
Bootstrap support for Q5JH18 as seed ortholog is 100%.
Bootstrap support for H2SV21 as seed ortholog is 100%.

Group of orthologs #189. Best score 117 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:117 T.rubripes:117

Q5JD70              	100.00%		H2TS57              	100.00%
Q5JHN7              	6.68%		
Bootstrap support for Q5JD70 as seed ortholog is 100%.
Bootstrap support for H2TS57 as seed ortholog is 100%.

Group of orthologs #190. Best score 117 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:117 T.rubripes:117

Q5JDB6              	100.00%		H2UZ86              	100.00%
                    	       		H2V0V7              	6.11%
Bootstrap support for Q5JDB6 as seed ortholog is 100%.
Bootstrap support for H2UZ86 as seed ortholog is 100%.

Group of orthologs #191. Best score 117 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:117 T.rubripes:117

Q5JEZ6              	100.00%		H2S3S4              	100.00%
Bootstrap support for Q5JEZ6 as seed ortholog is 100%.
Bootstrap support for H2S3S4 as seed ortholog is 100%.

Group of orthologs #192. Best score 117 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:117 T.rubripes:38

Q5JG15              	100.00%		H2SY27              	100.00%
Bootstrap support for Q5JG15 as seed ortholog is 100%.
Bootstrap support for H2SY27 as seed ortholog is 89%.

Group of orthologs #193. Best score 117 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:117 T.rubripes:52

Q5JFS0              	100.00%		H2T809              	100.00%
Bootstrap support for Q5JFS0 as seed ortholog is 100%.
Bootstrap support for H2T809 as seed ortholog is 91%.

Group of orthologs #194. Best score 117 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:117 T.rubripes:117

Q5JIQ1              	100.00%		H2T792              	100.00%
Bootstrap support for Q5JIQ1 as seed ortholog is 100%.
Bootstrap support for H2T792 as seed ortholog is 100%.

Group of orthologs #195. Best score 117 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:117 T.rubripes:49

Q76CZ2              	100.00%		H2TP86              	100.00%
Bootstrap support for Q76CZ2 as seed ortholog is 100%.
Bootstrap support for H2TP86 as seed ortholog is 92%.

Group of orthologs #196. Best score 117 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:117 T.rubripes:117

Q5JJF9              	100.00%		H2TQK1              	100.00%
Bootstrap support for Q5JJF9 as seed ortholog is 100%.
Bootstrap support for H2TQK1 as seed ortholog is 100%.

Group of orthologs #197. Best score 117 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:117 T.rubripes:117

Q5JFL7              	100.00%		H2VD87              	100.00%
Bootstrap support for Q5JFL7 as seed ortholog is 100%.
Bootstrap support for H2VD87 as seed ortholog is 100%.

Group of orthologs #198. Best score 116 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:116 T.rubripes:116

Q5JGT2              	100.00%		H2TTP4              	100.00%
Q5JI45              	39.40%		
Bootstrap support for Q5JGT2 as seed ortholog is 100%.
Bootstrap support for H2TTP4 as seed ortholog is 100%.

Group of orthologs #199. Best score 116 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:116 T.rubripes:116

Q5JHL2              	100.00%		H2RPG5              	100.00%
Bootstrap support for Q5JHL2 as seed ortholog is 100%.
Bootstrap support for H2RPG5 as seed ortholog is 100%.

Group of orthologs #200. Best score 116 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:116 T.rubripes:57

Q5JJF2              	100.00%		H2UUL1              	100.00%
Bootstrap support for Q5JJF2 as seed ortholog is 100%.
Bootstrap support for H2UUL1 as seed ortholog is 99%.

Group of orthologs #201. Best score 116 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:116 T.rubripes:116

Q5JDI9              	100.00%		H2VCV0              	100.00%
Bootstrap support for Q5JDI9 as seed ortholog is 100%.
Bootstrap support for H2VCV0 as seed ortholog is 100%.

Group of orthologs #202. Best score 115 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:115 T.rubripes:115

Q5JDB8              	100.00%		H2T7W9              	100.00%
Bootstrap support for Q5JDB8 as seed ortholog is 100%.
Bootstrap support for H2T7W9 as seed ortholog is 100%.

Group of orthologs #203. Best score 115 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:115 T.rubripes:115

Q5JDP7              	100.00%		H2V928              	100.00%
Bootstrap support for Q5JDP7 as seed ortholog is 100%.
Bootstrap support for H2V928 as seed ortholog is 100%.

Group of orthologs #204. Best score 114 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:114 T.rubripes:114

Q5JIJ0              	100.00%		H2T2U6              	100.00%
                    	       		H2V0R3              	9.40%
Bootstrap support for Q5JIJ0 as seed ortholog is 100%.
Bootstrap support for H2T2U6 as seed ortholog is 100%.

Group of orthologs #205. Best score 114 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:114 T.rubripes:51

Q5JDZ9              	100.00%		H2VDX0              	100.00%
Q5JFM9              	5.18%		
Bootstrap support for Q5JDZ9 as seed ortholog is 100%.
Bootstrap support for H2VDX0 as seed ortholog is 99%.

Group of orthologs #206. Best score 114 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:114 T.rubripes:114

Q5JDI6              	100.00%		H2RYB3              	100.00%
Bootstrap support for Q5JDI6 as seed ortholog is 100%.
Bootstrap support for H2RYB3 as seed ortholog is 100%.

Group of orthologs #207. Best score 114 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:114 T.rubripes:114

Q5JI74              	100.00%		H2UPR6              	100.00%
Bootstrap support for Q5JI74 as seed ortholog is 100%.
Bootstrap support for H2UPR6 as seed ortholog is 100%.

Group of orthologs #208. Best score 113 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:113 T.rubripes:113

Q5JI34              	100.00%		H2TUM7              	100.00%
                    	       		H2S681              	72.14%
                    	       		H2SQ02              	69.54%
                    	       		H2T9Q4              	9.55%
                    	       		H2S6P8              	8.15%
                    	       		H2RSR3              	7.08%
                    	       		H2U2J8              	7.08%
Bootstrap support for Q5JI34 as seed ortholog is 100%.
Bootstrap support for H2TUM7 as seed ortholog is 100%.

Group of orthologs #209. Best score 113 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:113 T.rubripes:113

Q5JET2              	100.00%		H2SP67              	100.00%
Bootstrap support for Q5JET2 as seed ortholog is 100%.
Bootstrap support for H2SP67 as seed ortholog is 100%.

Group of orthologs #210. Best score 112 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:112 T.rubripes:112

Q5JFV4              	100.00%		H2UV54              	100.00%
Bootstrap support for Q5JFV4 as seed ortholog is 100%.
Bootstrap support for H2UV54 as seed ortholog is 100%.

Group of orthologs #211. Best score 111 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:111 T.rubripes:26

Q5JDJ9              	100.00%		H2RWR2              	100.00%
                    	       		H2UAV9              	19.73%
Bootstrap support for Q5JDJ9 as seed ortholog is 100%.
Bootstrap support for H2RWR2 as seed ortholog is 87%.

Group of orthologs #212. Best score 111 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:111 T.rubripes:111

Q5JIR1              	100.00%		H2V9W9              	100.00%
Bootstrap support for Q5JIR1 as seed ortholog is 100%.
Bootstrap support for H2V9W9 as seed ortholog is 100%.

Group of orthologs #213. Best score 110 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:110 T.rubripes:20

Q5JFD8              	100.00%		H2T5T5              	100.00%
                    	       		H2S7P8              	57.39%
                    	       		H2TSN4              	50.75%
                    	       		H2SCV4              	45.69%
                    	       		H2TPZ0              	44.03%
                    	       		H2TVI8              	38.74%
Bootstrap support for Q5JFD8 as seed ortholog is 100%.
Bootstrap support for H2T5T5 as seed ortholog is 68%.
Alternative seed ortholog is H2SHT4 (20 bits away from this cluster)

Group of orthologs #214. Best score 110 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:110 T.rubripes:9

Q5JHU9              	100.00%		Q8HCV5              	100.00%
Q5JGJ2              	16.67%		
Q5JGJ3              	9.41%		
Q5JDL7              	7.94%		
Bootstrap support for Q5JHU9 as seed ortholog is 100%.
Bootstrap support for Q8HCV5 as seed ortholog is 65%.
Alternative seed ortholog is Q8HCV6 (9 bits away from this cluster)

Group of orthologs #215. Best score 110 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:110 T.rubripes:110

Q5JE74              	100.00%		H2TF85              	100.00%
Bootstrap support for Q5JE74 as seed ortholog is 100%.
Bootstrap support for H2TF85 as seed ortholog is 100%.

Group of orthologs #216. Best score 109 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:109 T.rubripes:109

Q5JGT4              	100.00%		H2RJB3              	100.00%
Bootstrap support for Q5JGT4 as seed ortholog is 100%.
Bootstrap support for H2RJB3 as seed ortholog is 100%.

Group of orthologs #217. Best score 109 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:109 T.rubripes:109

Q5JD59              	100.00%		H2S9X4              	100.00%
Bootstrap support for Q5JD59 as seed ortholog is 100%.
Bootstrap support for H2S9X4 as seed ortholog is 100%.

Group of orthologs #218. Best score 109 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:109 T.rubripes:109

Q5JET7              	100.00%		H2SBJ0              	100.00%
Bootstrap support for Q5JET7 as seed ortholog is 100%.
Bootstrap support for H2SBJ0 as seed ortholog is 100%.

Group of orthologs #219. Best score 108 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:108 T.rubripes:108

Q5JH16              	100.00%		H2UQM1              	100.00%
Bootstrap support for Q5JH16 as seed ortholog is 100%.
Bootstrap support for H2UQM1 as seed ortholog is 100%.

Group of orthologs #220. Best score 107 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:107 T.rubripes:46

Q5JI09              	100.00%		H2V1K0              	100.00%
                    	       		H2V1H3              	52.47%
                    	       		H2UYA3              	37.48%
                    	       		H2V8F4              	34.92%
                    	       		H2V0T0              	34.07%
                    	       		H2SNP4              	27.77%
                    	       		H2SUK7              	11.93%
Bootstrap support for Q5JI09 as seed ortholog is 100%.
Bootstrap support for H2V1K0 as seed ortholog is 84%.

Group of orthologs #221. Best score 107 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:107 T.rubripes:107

Q5JEB7              	100.00%		H2UKJ6              	100.00%
Bootstrap support for Q5JEB7 as seed ortholog is 100%.
Bootstrap support for H2UKJ6 as seed ortholog is 100%.

Group of orthologs #222. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 T.rubripes:106

Q5JEI4              	100.00%		H2TWW0              	100.00%
Bootstrap support for Q5JEI4 as seed ortholog is 100%.
Bootstrap support for H2TWW0 as seed ortholog is 100%.

Group of orthologs #223. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 T.rubripes:106

Q5JFN5              	100.00%		H2UTP7              	100.00%
Bootstrap support for Q5JFN5 as seed ortholog is 100%.
Bootstrap support for H2UTP7 as seed ortholog is 100%.

Group of orthologs #224. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 T.rubripes:106

Q5JIQ8              	100.00%		H2UZJ4              	100.00%
Bootstrap support for Q5JIQ8 as seed ortholog is 100%.
Bootstrap support for H2UZJ4 as seed ortholog is 100%.

Group of orthologs #225. Best score 105 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:105 T.rubripes:105

Q5JJ91              	100.00%		H2TVH1              	100.00%
Bootstrap support for Q5JJ91 as seed ortholog is 100%.
Bootstrap support for H2TVH1 as seed ortholog is 100%.

Group of orthologs #226. Best score 104 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:104 T.rubripes:104

Q5JH39              	100.00%		H2RMT0              	100.00%
                    	       		H2RJC9              	53.07%
                    	       		H2T5Q7              	48.80%
Bootstrap support for Q5JH39 as seed ortholog is 100%.
Bootstrap support for H2RMT0 as seed ortholog is 100%.

Group of orthologs #227. Best score 104 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:104 T.rubripes:104

Q5JEX8              	100.00%		H2T0P5              	100.00%
                    	       		H2UZ08              	100.00%
Bootstrap support for Q5JEX8 as seed ortholog is 100%.
Bootstrap support for H2T0P5 as seed ortholog is 100%.
Bootstrap support for H2UZ08 as seed ortholog is 100%.

Group of orthologs #228. Best score 104 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:104 T.rubripes:104

O74035              	100.00%		H2RJ01              	100.00%
Bootstrap support for O74035 as seed ortholog is 100%.
Bootstrap support for H2RJ01 as seed ortholog is 100%.

Group of orthologs #229. Best score 104 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:104 T.rubripes:104

Q5JH82              	100.00%		H2SES3              	100.00%
Bootstrap support for Q5JH82 as seed ortholog is 100%.
Bootstrap support for H2SES3 as seed ortholog is 100%.

Group of orthologs #230. Best score 103 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:103 T.rubripes:103

Q5JI20              	100.00%		H2URM4              	100.00%
                    	       		H2URB1              	34.52%
                    	       		H2UL35              	19.74%
                    	       		H2S3M1              	19.21%
                    	       		H2V0A8              	18.28%
                    	       		H2TBG1              	16.37%
                    	       		H2V2N8              	14.46%
Bootstrap support for Q5JI20 as seed ortholog is 100%.
Bootstrap support for H2URM4 as seed ortholog is 100%.

Group of orthologs #231. Best score 103 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:103 T.rubripes:17

Q5JGK8              	100.00%		H2SPI9              	100.00%
Bootstrap support for Q5JGK8 as seed ortholog is 100%.
Bootstrap support for H2SPI9 as seed ortholog is 69%.
Alternative seed ortholog is H2V8I6 (17 bits away from this cluster)

Group of orthologs #232. Best score 103 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:103 T.rubripes:103

Q5JGI1              	100.00%		H2TGT7              	100.00%
Bootstrap support for Q5JGI1 as seed ortholog is 100%.
Bootstrap support for H2TGT7 as seed ortholog is 100%.

Group of orthologs #233. Best score 103 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:103 T.rubripes:103

Q5JGN5              	100.00%		H2TYD0              	100.00%
Bootstrap support for Q5JGN5 as seed ortholog is 100%.
Bootstrap support for H2TYD0 as seed ortholog is 100%.

Group of orthologs #234. Best score 103 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:103 T.rubripes:103

Q5JH35              	100.00%		H2UWL3              	100.00%
Bootstrap support for Q5JH35 as seed ortholog is 100%.
Bootstrap support for H2UWL3 as seed ortholog is 100%.

Group of orthologs #235. Best score 102 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:102 T.rubripes:4

Q5JJF4              	100.00%		H2SFB7              	100.00%
Bootstrap support for Q5JJF4 as seed ortholog is 100%.
Bootstrap support for H2SFB7 as seed ortholog is 54%.
Alternative seed ortholog is H2SSB1 (4 bits away from this cluster)

Group of orthologs #236. Best score 102 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:102 T.rubripes:102

Q5JJE2              	100.00%		H2UAH8              	100.00%
Bootstrap support for Q5JJE2 as seed ortholog is 100%.
Bootstrap support for H2UAH8 as seed ortholog is 100%.

Group of orthologs #237. Best score 102 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:102 T.rubripes:102

Q5JFJ9              	100.00%		H2V715              	100.00%
Bootstrap support for Q5JFJ9 as seed ortholog is 100%.
Bootstrap support for H2V715 as seed ortholog is 100%.

Group of orthologs #238. Best score 101 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:101 T.rubripes:101

Q5JEW5              	100.00%		H2RNY1              	100.00%
                    	       		H2SG23              	54.30%
Bootstrap support for Q5JEW5 as seed ortholog is 100%.
Bootstrap support for H2RNY1 as seed ortholog is 100%.

Group of orthologs #239. Best score 101 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:101 T.rubripes:101

Q5JGT7              	100.00%		H2U878              	100.00%
Bootstrap support for Q5JGT7 as seed ortholog is 100%.
Bootstrap support for H2U878 as seed ortholog is 100%.

Group of orthologs #240. Best score 100 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:100 T.rubripes:100

Q5JHR7              	100.00%		H2V4U0              	100.00%
Bootstrap support for Q5JHR7 as seed ortholog is 100%.
Bootstrap support for H2V4U0 as seed ortholog is 100%.

Group of orthologs #241. Best score 99 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:99 T.rubripes:99

Q5JF32              	100.00%		H2UI14              	100.00%
Q5JFD3              	44.62%		
Bootstrap support for Q5JF32 as seed ortholog is 100%.
Bootstrap support for H2UI14 as seed ortholog is 100%.

Group of orthologs #242. Best score 99 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:99 T.rubripes:15

Q5JIB6              	100.00%		H2RRC6              	100.00%
Bootstrap support for Q5JIB6 as seed ortholog is 100%.
Bootstrap support for H2RRC6 as seed ortholog is 64%.
Alternative seed ortholog is H2RRT8 (15 bits away from this cluster)

Group of orthologs #243. Best score 99 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:99 T.rubripes:38

Q5JJB9              	100.00%		H2S9E9              	100.00%
Bootstrap support for Q5JJB9 as seed ortholog is 100%.
Bootstrap support for H2S9E9 as seed ortholog is 78%.

Group of orthologs #244. Best score 99 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:99 T.rubripes:99

Q5JJG7              	100.00%		H2SH26              	100.00%
Bootstrap support for Q5JJG7 as seed ortholog is 100%.
Bootstrap support for H2SH26 as seed ortholog is 100%.

Group of orthologs #245. Best score 98 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:98 T.rubripes:53

Q5JHY2              	100.00%		H2UUI7              	100.00%
                    	       		H2U0H0              	53.61%
                    	       		H2UVF4              	39.59%
Bootstrap support for Q5JHY2 as seed ortholog is 100%.
Bootstrap support for H2UUI7 as seed ortholog is 90%.

Group of orthologs #246. Best score 98 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:98 T.rubripes:29

Q5JH42              	100.00%		H2T0Z1              	100.00%
Bootstrap support for Q5JH42 as seed ortholog is 100%.
Bootstrap support for H2T0Z1 as seed ortholog is 80%.

Group of orthologs #247. Best score 98 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:98 T.rubripes:98

Q5JGZ7              	100.00%		H2TJ50              	100.00%
Bootstrap support for Q5JGZ7 as seed ortholog is 100%.
Bootstrap support for H2TJ50 as seed ortholog is 100%.

Group of orthologs #248. Best score 98 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:98 T.rubripes:98

Q5JDH4              	100.00%		H2VEX5              	100.00%
Bootstrap support for Q5JDH4 as seed ortholog is 100%.
Bootstrap support for H2VEX5 as seed ortholog is 100%.

Group of orthologs #249. Best score 97 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:97 T.rubripes:97

Q5JFV6              	100.00%		H2V309              	100.00%
                    	       		H2SWW6              	5.73%
Bootstrap support for Q5JFV6 as seed ortholog is 100%.
Bootstrap support for H2V309 as seed ortholog is 100%.

Group of orthologs #250. Best score 97 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:97 T.rubripes:30

Q5JIA1              	100.00%		H2SCP0              	100.00%
Bootstrap support for Q5JIA1 as seed ortholog is 100%.
Bootstrap support for H2SCP0 as seed ortholog is 84%.

Group of orthologs #251. Best score 96 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:96 T.rubripes:16

Q5JHL8              	100.00%		H2T133              	100.00%
Bootstrap support for Q5JHL8 as seed ortholog is 100%.
Bootstrap support for H2T133 as seed ortholog is 73%.
Alternative seed ortholog is H2UH66 (16 bits away from this cluster)

Group of orthologs #252. Best score 95 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:9 T.rubripes:95

Q5JJ24              	100.00%		H2RT67              	100.00%
Bootstrap support for Q5JJ24 as seed ortholog is 61%.
Alternative seed ortholog is Q5JHS2 (9 bits away from this cluster)
Bootstrap support for H2RT67 as seed ortholog is 100%.

Group of orthologs #253. Best score 94 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:94 T.rubripes:94

Q5JGQ4              	100.00%		H2S573              	100.00%
Q5JIE2              	100.00%		H2SFM7              	100.00%
Q5JGQ5              	54.85%		H2RKF4              	86.99%
                    	       		H2RPT9              	76.45%
                    	       		H2VAB4              	64.95%
                    	       		H2RR29              	47.48%
                    	       		H2RJH7              	35.52%
                    	       		H2RSL5              	32.00%
                    	       		H2RVD1              	29.44%
                    	       		H2RQF9              	22.03%
                    	       		H2V405              	18.71%
Bootstrap support for Q5JGQ4 as seed ortholog is 100%.
Bootstrap support for Q5JIE2 as seed ortholog is 100%.
Bootstrap support for H2S573 as seed ortholog is 100%.
Bootstrap support for H2SFM7 as seed ortholog is 100%.

Group of orthologs #254. Best score 94 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:94 T.rubripes:4

Q5JIL6              	100.00%		H2V4M7              	100.00%
                    	       		H2SE71              	38.03%
                    	       		H2S3U2              	36.00%
                    	       		H2S8R5              	35.54%
                    	       		H2U1A2              	35.27%
                    	       		H2UZP6              	31.58%
                    	       		H2RR27              	31.40%
                    	       		H2RQZ8              	31.22%
                    	       		H2T8L8              	30.85%
                    	       		H2RRG7              	30.48%
                    	       		H2S935              	29.19%
Bootstrap support for Q5JIL6 as seed ortholog is 100%.
Bootstrap support for H2V4M7 as seed ortholog is 57%.
Alternative seed ortholog is H2SYH0 (4 bits away from this cluster)

Group of orthologs #255. Best score 94 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:94 T.rubripes:94

Q5JFK6              	100.00%		H2SPA5              	100.00%
Q5JES6              	18.21%		
Bootstrap support for Q5JFK6 as seed ortholog is 100%.
Bootstrap support for H2SPA5 as seed ortholog is 100%.

Group of orthologs #256. Best score 94 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:94 T.rubripes:94

Q5JJ02              	100.00%		H2TPM0              	100.00%
Bootstrap support for Q5JJ02 as seed ortholog is 100%.
Bootstrap support for H2TPM0 as seed ortholog is 100%.

Group of orthologs #257. Best score 93 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:93 T.rubripes:93

Q5JIV0              	100.00%		H2UW24              	100.00%
Bootstrap support for Q5JIV0 as seed ortholog is 100%.
Bootstrap support for H2UW24 as seed ortholog is 100%.

Group of orthologs #258. Best score 93 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:93 T.rubripes:93

Q5JG02              	100.00%		H2V4U8              	100.00%
Bootstrap support for Q5JG02 as seed ortholog is 100%.
Bootstrap support for H2V4U8 as seed ortholog is 100%.

Group of orthologs #259. Best score 92 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:92 T.rubripes:92

Q5JJF6              	100.00%		H2T936              	100.00%
Bootstrap support for Q5JJF6 as seed ortholog is 100%.
Bootstrap support for H2T936 as seed ortholog is 100%.

Group of orthologs #260. Best score 91 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:91 T.rubripes:37

Q5JDV0              	100.00%		H2SPA7              	100.00%
                    	       		H2SMH0              	36.93%
                    	       		H2RNS5              	27.87%
Bootstrap support for Q5JDV0 as seed ortholog is 100%.
Bootstrap support for H2SPA7 as seed ortholog is 88%.

Group of orthologs #261. Best score 91 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:91 T.rubripes:91

Q5JFZ5              	100.00%		H2S781              	100.00%
Bootstrap support for Q5JFZ5 as seed ortholog is 100%.
Bootstrap support for H2S781 as seed ortholog is 100%.

Group of orthologs #262. Best score 91 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:91 T.rubripes:91

Q5JDH1              	100.00%		H2V3G3              	100.00%
Bootstrap support for Q5JDH1 as seed ortholog is 100%.
Bootstrap support for H2V3G3 as seed ortholog is 100%.

Group of orthologs #263. Best score 91 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:91 T.rubripes:91

Q5JD92              	100.00%		H2V7G4              	100.00%
Bootstrap support for Q5JD92 as seed ortholog is 100%.
Bootstrap support for H2V7G4 as seed ortholog is 100%.

Group of orthologs #264. Best score 90 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:90 T.rubripes:15

Q5JGR3              	100.00%		H2V135              	100.00%
Bootstrap support for Q5JGR3 as seed ortholog is 100%.
Bootstrap support for H2V135 as seed ortholog is 86%.

Group of orthologs #265. Best score 89 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:89 T.rubripes:89

Q5JJ28              	100.00%		H2T1X3              	100.00%
Bootstrap support for Q5JJ28 as seed ortholog is 100%.
Bootstrap support for H2T1X3 as seed ortholog is 100%.

Group of orthologs #266. Best score 89 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:89 T.rubripes:89

Q5JJG5              	100.00%		H2TGX4              	100.00%
Bootstrap support for Q5JJG5 as seed ortholog is 100%.
Bootstrap support for H2TGX4 as seed ortholog is 100%.

Group of orthologs #267. Best score 88 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:88 T.rubripes:30

Q5JFZ8              	100.00%		H2V079              	100.00%
Q5JGP4              	21.45%		
Bootstrap support for Q5JFZ8 as seed ortholog is 100%.
Bootstrap support for H2V079 as seed ortholog is 82%.

Group of orthologs #268. Best score 88 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:88 T.rubripes:41

O08467              	100.00%		H2TC29              	100.00%
Bootstrap support for O08467 as seed ortholog is 100%.
Bootstrap support for H2TC29 as seed ortholog is 83%.

Group of orthologs #269. Best score 88 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:88 T.rubripes:88

Q5JCY8              	100.00%		H2U0H5              	100.00%
Bootstrap support for Q5JCY8 as seed ortholog is 100%.
Bootstrap support for H2U0H5 as seed ortholog is 100%.

Group of orthologs #270. Best score 87 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:87 T.rubripes:87

Q5JGC7              	100.00%		H2U7U1              	100.00%
                    	       		H2RKV8              	47.00%
                    	       		H2U395              	42.66%
Bootstrap support for Q5JGC7 as seed ortholog is 100%.
Bootstrap support for H2U7U1 as seed ortholog is 100%.

Group of orthologs #271. Best score 86 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 T.rubripes:86

Q5JGH6              	100.00%		Q8HCW5              	100.00%
Q5JIL2              	11.94%		
Bootstrap support for Q5JGH6 as seed ortholog is 100%.
Bootstrap support for Q8HCW5 as seed ortholog is 100%.

Group of orthologs #272. Best score 86 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 T.rubripes:86

Q5JEL5              	100.00%		H2RJH6              	100.00%
Bootstrap support for Q5JEL5 as seed ortholog is 100%.
Bootstrap support for H2RJH6 as seed ortholog is 100%.

Group of orthologs #273. Best score 86 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 T.rubripes:86

Q5JEE1              	100.00%		H2RSL9              	100.00%
Bootstrap support for Q5JEE1 as seed ortholog is 100%.
Bootstrap support for H2RSL9 as seed ortholog is 100%.

Group of orthologs #274. Best score 86 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 T.rubripes:86

Q5JEX4              	100.00%		H2T3B8              	100.00%
Bootstrap support for Q5JEX4 as seed ortholog is 100%.
Bootstrap support for H2T3B8 as seed ortholog is 100%.

Group of orthologs #275. Best score 86 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 T.rubripes:86

Q877I0              	100.00%		H2U341              	100.00%
Bootstrap support for Q877I0 as seed ortholog is 100%.
Bootstrap support for H2U341 as seed ortholog is 100%.

Group of orthologs #276. Best score 86 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 T.rubripes:86

Q5JGM4              	100.00%		H2UNW7              	100.00%
Bootstrap support for Q5JGM4 as seed ortholog is 100%.
Bootstrap support for H2UNW7 as seed ortholog is 100%.

Group of orthologs #277. Best score 85 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:85 T.rubripes:16

Q5JH34              	100.00%		H2TXU3              	100.00%
Bootstrap support for Q5JH34 as seed ortholog is 100%.
Bootstrap support for H2TXU3 as seed ortholog is 81%.

Group of orthologs #278. Best score 85 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:85 T.rubripes:4

Q5JI92              	100.00%		H2U851              	100.00%
Bootstrap support for Q5JI92 as seed ortholog is 100%.
Bootstrap support for H2U851 as seed ortholog is 55%.
Alternative seed ortholog is H2RY29 (4 bits away from this cluster)

Group of orthologs #279. Best score 84 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:84 T.rubripes:2

Q68BJ7              	33.17%		H2RUJ3              	100.00%
Q68BJ6              	100.00%		H2VDZ6              	100.00%
Q6I7B6              	29.38%		H2UG44              	67.59%
Bootstrap support for Q68BJ6 as seed ortholog is 100%.
Bootstrap support for H2RUJ3 as seed ortholog is 42%.
Alternative seed ortholog is H2ULH9 (2 bits away from this cluster)
Bootstrap support for H2VDZ6 as seed ortholog is 46%.
Alternative seed ortholog is H2ULH9 (2 bits away from this cluster)

Group of orthologs #280. Best score 84 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:84 T.rubripes:84

Q5JH93              	100.00%		H2S9P1              	100.00%
Bootstrap support for Q5JH93 as seed ortholog is 100%.
Bootstrap support for H2S9P1 as seed ortholog is 100%.

Group of orthologs #281. Best score 84 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:84 T.rubripes:84

Q5JGS7              	100.00%		H2T538              	100.00%
Bootstrap support for Q5JGS7 as seed ortholog is 100%.
Bootstrap support for H2T538 as seed ortholog is 100%.

Group of orthologs #282. Best score 83 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:83 T.rubripes:83

Q5JFI2              	100.00%		H2SKE2              	100.00%
                    	       		H2SW40              	86.41%
                    	       		H2SS20              	46.09%
                    	       		H2T596              	27.72%
Bootstrap support for Q5JFI2 as seed ortholog is 100%.
Bootstrap support for H2SKE2 as seed ortholog is 100%.

Group of orthologs #283. Best score 83 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:83 T.rubripes:83

Q5JDH9              	100.00%		H2UH24              	100.00%
Bootstrap support for Q5JDH9 as seed ortholog is 100%.
Bootstrap support for H2UH24 as seed ortholog is 100%.

Group of orthologs #284. Best score 82 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:82 T.rubripes:82

Q5JI44              	100.00%		H2RW68              	100.00%
Bootstrap support for Q5JI44 as seed ortholog is 100%.
Bootstrap support for H2RW68 as seed ortholog is 100%.

Group of orthologs #285. Best score 82 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:82 T.rubripes:82

Q5JGM0              	100.00%		H2SWZ1              	100.00%
Bootstrap support for Q5JGM0 as seed ortholog is 100%.
Bootstrap support for H2SWZ1 as seed ortholog is 100%.

Group of orthologs #286. Best score 80 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:80 T.rubripes:80

Q5JJC3              	100.00%		H2RJK4              	100.00%
Bootstrap support for Q5JJC3 as seed ortholog is 100%.
Bootstrap support for H2RJK4 as seed ortholog is 100%.

Group of orthologs #287. Best score 80 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:80 T.rubripes:80

Q5JIX8              	100.00%		H2UCN4              	100.00%
Bootstrap support for Q5JIX8 as seed ortholog is 100%.
Bootstrap support for H2UCN4 as seed ortholog is 100%.

Group of orthologs #288. Best score 80 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:80 T.rubripes:80

Q5JIU6              	100.00%		H2UQ00              	100.00%
Bootstrap support for Q5JIU6 as seed ortholog is 100%.
Bootstrap support for H2UQ00 as seed ortholog is 100%.

Group of orthologs #289. Best score 80 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:80 T.rubripes:80

Q5JE49              	100.00%		H2V9Z7              	100.00%
Bootstrap support for Q5JE49 as seed ortholog is 100%.
Bootstrap support for H2V9Z7 as seed ortholog is 100%.

Group of orthologs #290. Best score 79 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:79 T.rubripes:79

Q5JIY3              	100.00%		H2SFF9              	100.00%
                    	       		H2U683              	54.97%
Bootstrap support for Q5JIY3 as seed ortholog is 100%.
Bootstrap support for H2SFF9 as seed ortholog is 100%.

Group of orthologs #291. Best score 79 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:79 T.rubripes:79

Q5JG26              	100.00%		H2S4U4              	100.00%
Bootstrap support for Q5JG26 as seed ortholog is 100%.
Bootstrap support for H2S4U4 as seed ortholog is 100%.

Group of orthologs #292. Best score 79 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:79 T.rubripes:79

Q5JHS0              	100.00%		H2TSR3              	100.00%
Bootstrap support for Q5JHS0 as seed ortholog is 100%.
Bootstrap support for H2TSR3 as seed ortholog is 100%.

Group of orthologs #293. Best score 78 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:6 T.rubripes:78

Q5JJ26              	100.00%		H2SG43              	100.00%
                    	       		H2U8Z1              	58.61%
Bootstrap support for Q5JJ26 as seed ortholog is 68%.
Alternative seed ortholog is Q5JGQ0 (6 bits away from this cluster)
Bootstrap support for H2SG43 as seed ortholog is 100%.

Group of orthologs #294. Best score 78 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:21 T.rubripes:7

Q5JJE5              	100.00%		H2STU6              	100.00%
                    	       		H2SRY8              	52.83%
Bootstrap support for Q5JJE5 as seed ortholog is 76%.
Bootstrap support for H2STU6 as seed ortholog is 59%.
Alternative seed ortholog is H2UX80 (7 bits away from this cluster)

Group of orthologs #295. Best score 78 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:78 T.rubripes:78

Q5JH26              	100.00%		H2S9R5              	100.00%
Bootstrap support for Q5JH26 as seed ortholog is 100%.
Bootstrap support for H2S9R5 as seed ortholog is 100%.

Group of orthologs #296. Best score 77 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:77 T.rubripes:77

Q5JDG1              	100.00%		H2SEF0              	100.00%
Bootstrap support for Q5JDG1 as seed ortholog is 100%.
Bootstrap support for H2SEF0 as seed ortholog is 100%.

Group of orthologs #297. Best score 76 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:76 T.rubripes:76

Q5JH60              	100.00%		H2UHE2              	100.00%
Bootstrap support for Q5JH60 as seed ortholog is 100%.
Bootstrap support for H2UHE2 as seed ortholog is 100%.

Group of orthologs #298. Best score 75 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:75 T.rubripes:75

Q5JJC9              	100.00%		H2V520              	100.00%
Bootstrap support for Q5JJC9 as seed ortholog is 100%.
Bootstrap support for H2V520 as seed ortholog is 100%.

Group of orthologs #299. Best score 74 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 T.rubripes:74

Q5JIK4              	100.00%		H2UI13              	100.00%
Q5JGT0              	7.86%		H2UF25              	19.78%
                    	       		H2RLP7              	19.46%
Bootstrap support for Q5JIK4 as seed ortholog is 100%.
Bootstrap support for H2UI13 as seed ortholog is 100%.

Group of orthologs #300. Best score 74 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 T.rubripes:74

Q5JIM5              	100.00%		H2V4I1              	100.00%
Q5JIM4              	35.89%		
Q5JI36              	22.26%		
Q5JJ83              	11.91%		
Bootstrap support for Q5JIM5 as seed ortholog is 100%.
Bootstrap support for H2V4I1 as seed ortholog is 100%.

Group of orthologs #301. Best score 74 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 T.rubripes:74

Q5JF42              	100.00%		H2RMY6              	100.00%
Bootstrap support for Q5JF42 as seed ortholog is 100%.
Bootstrap support for H2RMY6 as seed ortholog is 100%.

Group of orthologs #302. Best score 74 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 T.rubripes:74

Q5JH21              	100.00%		H2TXQ6              	100.00%
Bootstrap support for Q5JH21 as seed ortholog is 100%.
Bootstrap support for H2TXQ6 as seed ortholog is 100%.

Group of orthologs #303. Best score 73 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:73 T.rubripes:73

Q5JDC4              	100.00%		H2SU42              	100.00%
Bootstrap support for Q5JDC4 as seed ortholog is 100%.
Bootstrap support for H2SU42 as seed ortholog is 100%.

Group of orthologs #304. Best score 73 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:73 T.rubripes:25

Q5JHP6              	100.00%		H2UR05              	100.00%
Bootstrap support for Q5JHP6 as seed ortholog is 100%.
Bootstrap support for H2UR05 as seed ortholog is 80%.

Group of orthologs #305. Best score 72 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:72 T.rubripes:72

Q5JHC0              	100.00%		H2UB86              	100.00%
Q5JHG7              	6.22%		
Bootstrap support for Q5JHC0 as seed ortholog is 100%.
Bootstrap support for H2UB86 as seed ortholog is 100%.

Group of orthologs #306. Best score 72 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:72 T.rubripes:72

Q5JE35              	100.00%		H2UMT1              	100.00%
Bootstrap support for Q5JE35 as seed ortholog is 100%.
Bootstrap support for H2UMT1 as seed ortholog is 100%.

Group of orthologs #307. Best score 71 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:71 T.rubripes:71

Q5JJC1              	100.00%		H2UD86              	100.00%
                    	       		H2SWA5              	60.39%
Bootstrap support for Q5JJC1 as seed ortholog is 100%.
Bootstrap support for H2UD86 as seed ortholog is 100%.

Group of orthologs #308. Best score 71 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:71 T.rubripes:11

Q5JF34              	100.00%		H2TZ33              	100.00%
Bootstrap support for Q5JF34 as seed ortholog is 100%.
Bootstrap support for H2TZ33 as seed ortholog is 63%.
Alternative seed ortholog is H2RKA8 (11 bits away from this cluster)

Group of orthologs #309. Best score 70 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:70 T.rubripes:70

Q5JDM6              	100.00%		H2S6T9              	100.00%
Bootstrap support for Q5JDM6 as seed ortholog is 100%.
Bootstrap support for H2S6T9 as seed ortholog is 100%.

Group of orthologs #310. Best score 70 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:70 T.rubripes:70

Q5JGN3              	100.00%		H2VB72              	100.00%
Bootstrap support for Q5JGN3 as seed ortholog is 100%.
Bootstrap support for H2VB72 as seed ortholog is 100%.

Group of orthologs #311. Best score 69 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:21 T.rubripes:69

Q5JG46              	100.00%		H2SXX8              	100.00%
Q5JD61              	5.24%		
Bootstrap support for Q5JG46 as seed ortholog is 74%.
Alternative seed ortholog is Q5JJ85 (21 bits away from this cluster)
Bootstrap support for H2SXX8 as seed ortholog is 100%.

Group of orthologs #312. Best score 69 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:69 T.rubripes:69

Q5JDS0              	100.00%		H2TV58              	100.00%
                    	       		H2S2M4              	77.05%
Bootstrap support for Q5JDS0 as seed ortholog is 100%.
Bootstrap support for H2TV58 as seed ortholog is 100%.

Group of orthologs #313. Best score 68 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:68 T.rubripes:68

Q5JI42              	100.00%		H2TZY2              	100.00%
                    	       		H2TY85              	57.87%
                    	       		H2S6Z8              	50.39%
Bootstrap support for Q5JI42 as seed ortholog is 100%.
Bootstrap support for H2TZY2 as seed ortholog is 100%.

Group of orthologs #314. Best score 67 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:67 T.rubripes:67

Q5JII2              	100.00%		H2V4V0              	100.00%
                    	       		H2UHX9              	67.10%
                    	       		H2U914              	36.81%
Bootstrap support for Q5JII2 as seed ortholog is 100%.
Bootstrap support for H2V4V0 as seed ortholog is 100%.

Group of orthologs #315. Best score 66 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:66 T.rubripes:9

Q5JHM0              	100.00%		H2S5K2              	100.00%
Q5JJC2              	17.34%		
Bootstrap support for Q5JHM0 as seed ortholog is 100%.
Bootstrap support for H2S5K2 as seed ortholog is 43%.
Alternative seed ortholog is H2TMC5 (9 bits away from this cluster)

Group of orthologs #316. Best score 66 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:66 T.rubripes:11

Q5JFY8              	100.00%		H2RQ47              	100.00%
Bootstrap support for Q5JFY8 as seed ortholog is 100%.
Bootstrap support for H2RQ47 as seed ortholog is 61%.
Alternative seed ortholog is H2SMC7 (11 bits away from this cluster)

Group of orthologs #317. Best score 66 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:66 T.rubripes:66

Q5JHT3              	100.00%		H2TI11              	100.00%
Bootstrap support for Q5JHT3 as seed ortholog is 100%.
Bootstrap support for H2TI11 as seed ortholog is 100%.

Group of orthologs #318. Best score 66 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:66 T.rubripes:23

Q8X268              	100.00%		H2US52              	100.00%
Bootstrap support for Q8X268 as seed ortholog is 100%.
Bootstrap support for H2US52 as seed ortholog is 63%.
Alternative seed ortholog is H2U4H1 (23 bits away from this cluster)

Group of orthologs #319. Best score 65 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:65 T.rubripes:65

Q5JFW0              	100.00%		H2UII0              	100.00%
Bootstrap support for Q5JFW0 as seed ortholog is 100%.
Bootstrap support for H2UII0 as seed ortholog is 100%.

Group of orthologs #320. Best score 65 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:65 T.rubripes:65

Q5JE20              	100.00%		H2V5E9              	100.00%
Bootstrap support for Q5JE20 as seed ortholog is 100%.
Bootstrap support for H2V5E9 as seed ortholog is 100%.

Group of orthologs #321. Best score 64 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:64 T.rubripes:64

Q5JFH7              	100.00%		H2RN09              	100.00%
Q5JEW2              	37.15%		
Q5JIA8              	36.91%		
Q5JEN7              	36.19%		
Q5JEY6              	36.19%		
Bootstrap support for Q5JFH7 as seed ortholog is 100%.
Bootstrap support for H2RN09 as seed ortholog is 100%.

Group of orthologs #322. Best score 64 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:64 T.rubripes:64

Q5JJG9              	100.00%		H2RTQ6              	100.00%
                    	       		H2T2T9              	39.22%
Bootstrap support for Q5JJG9 as seed ortholog is 100%.
Bootstrap support for H2RTQ6 as seed ortholog is 100%.

Group of orthologs #323. Best score 63 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:63 T.rubripes:63

Q5JGZ3              	100.00%		H2SL40              	100.00%
Q5JGZ2              	100.00%		H2SZF7              	100.00%
Bootstrap support for Q5JGZ3 as seed ortholog is 100%.
Bootstrap support for Q5JGZ2 as seed ortholog is 100%.
Bootstrap support for H2SL40 as seed ortholog is 100%.
Bootstrap support for H2SZF7 as seed ortholog is 100%.

Group of orthologs #324. Best score 63 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:63 T.rubripes:63

Q5JE39              	100.00%		H2UTE9              	100.00%
Q5JD05              	15.46%		H2TFE8              	15.52%
Bootstrap support for Q5JE39 as seed ortholog is 100%.
Bootstrap support for H2UTE9 as seed ortholog is 100%.

Group of orthologs #325. Best score 63 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:63 T.rubripes:63

Q5JI47              	100.00%		H2SE11              	100.00%
Bootstrap support for Q5JI47 as seed ortholog is 100%.
Bootstrap support for H2SE11 as seed ortholog is 100%.

Group of orthologs #326. Best score 63 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:63 T.rubripes:63

Q5JHS3              	100.00%		H2UZY0              	100.00%
Bootstrap support for Q5JHS3 as seed ortholog is 100%.
Bootstrap support for H2UZY0 as seed ortholog is 100%.

Group of orthologs #327. Best score 62 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:62 T.rubripes:62

Q5JE10              	100.00%		H2UWZ3              	100.00%
                    	       		H2RMA6              	18.75%
                    	       		H2RNP0              	17.81%
                    	       		H2U4Q2              	15.80%
Bootstrap support for Q5JE10 as seed ortholog is 100%.
Bootstrap support for H2UWZ3 as seed ortholog is 100%.

Group of orthologs #328. Best score 62 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:7 T.rubripes:62

Q5JIE3              	100.00%		H2SYT7              	100.00%
Bootstrap support for Q5JIE3 as seed ortholog is 62%.
Alternative seed ortholog is Q5JE63 (7 bits away from this cluster)
Bootstrap support for H2SYT7 as seed ortholog is 100%.

Group of orthologs #329. Best score 62 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:62 T.rubripes:4

Q5JH80              	100.00%		H2U3S9              	100.00%
Bootstrap support for Q5JH80 as seed ortholog is 100%.
Bootstrap support for H2U3S9 as seed ortholog is 52%.
Alternative seed ortholog is H2SDD7 (4 bits away from this cluster)

Group of orthologs #330. Best score 61 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 T.rubripes:61

Q5JDG6              	100.00%		H2RIS1              	100.00%
Bootstrap support for Q5JDG6 as seed ortholog is 100%.
Bootstrap support for H2RIS1 as seed ortholog is 100%.

Group of orthologs #331. Best score 61 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 T.rubripes:61

Q5JGR4              	100.00%		H2TER7              	100.00%
Bootstrap support for Q5JGR4 as seed ortholog is 100%.
Bootstrap support for H2TER7 as seed ortholog is 100%.

Group of orthologs #332. Best score 61 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 T.rubripes:61

Q5JJH0              	100.00%		H2TF36              	100.00%
Bootstrap support for Q5JJH0 as seed ortholog is 100%.
Bootstrap support for H2TF36 as seed ortholog is 100%.

Group of orthologs #333. Best score 60 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:60 T.rubripes:1

Q5JF76              	100.00%		H2TAI6              	100.00%
                    	       		H2VA85              	51.15%
Bootstrap support for Q5JF76 as seed ortholog is 100%.
Bootstrap support for H2TAI6 as seed ortholog is 49%.
Alternative seed ortholog is H2U7B3 (1 bits away from this cluster)

Group of orthologs #334. Best score 60 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:4 T.rubripes:13

Q5JDG9              	100.00%		H2SRH7              	100.00%
Bootstrap support for Q5JDG9 as seed ortholog is 74%.
Alternative seed ortholog is Q5JEK6 (4 bits away from this cluster)
Bootstrap support for H2SRH7 as seed ortholog is 65%.
Alternative seed ortholog is H2UKE8 (13 bits away from this cluster)

Group of orthologs #335. Best score 60 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:60 T.rubripes:60

Q5JEE0              	100.00%		H2USD2              	100.00%
Bootstrap support for Q5JEE0 as seed ortholog is 100%.
Bootstrap support for H2USD2 as seed ortholog is 100%.

Group of orthologs #336. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 T.rubripes:59

Q5JJ13              	100.00%		H2TVI6              	100.00%
Q5JJ46              	8.13%		
Q5JIA3              	6.06%		
Q5JJ23              	6.06%		
Bootstrap support for Q5JJ13 as seed ortholog is 100%.
Bootstrap support for H2TVI6 as seed ortholog is 100%.

Group of orthologs #337. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 T.rubripes:59

Q5JE51              	100.00%		H2U0Z1              	100.00%
                    	       		P61486              	100.00%
Bootstrap support for Q5JE51 as seed ortholog is 100%.
Bootstrap support for H2U0Z1 as seed ortholog is 100%.
Bootstrap support for P61486 as seed ortholog is 100%.

Group of orthologs #338. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 T.rubripes:59

Q8NKS4              	100.00%		H2UTQ2              	100.00%
Q5JJ90              	11.17%		
Bootstrap support for Q8NKS4 as seed ortholog is 100%.
Bootstrap support for H2UTQ2 as seed ortholog is 100%.

Group of orthologs #339. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 T.rubripes:59

Q5JJ72              	100.00%		H2RL95              	100.00%
Bootstrap support for Q5JJ72 as seed ortholog is 100%.
Bootstrap support for H2RL95 as seed ortholog is 100%.

Group of orthologs #340. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 T.rubripes:59

Q5JEM0              	100.00%		H2SDM6              	100.00%
Bootstrap support for Q5JEM0 as seed ortholog is 100%.
Bootstrap support for H2SDM6 as seed ortholog is 100%.

Group of orthologs #341. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 T.rubripes:59

Q5JE55              	100.00%		H2SH40              	100.00%
Bootstrap support for Q5JE55 as seed ortholog is 100%.
Bootstrap support for H2SH40 as seed ortholog is 100%.

Group of orthologs #342. Best score 58 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:58 T.rubripes:58

Q5JJA4              	100.00%		H2TS43              	100.00%
                    	       		H2SML8              	19.63%
                    	       		H2VDY1              	13.68%
                    	       		H2TKH5              	10.39%
                    	       		H2UDG5              	10.13%
Bootstrap support for Q5JJA4 as seed ortholog is 100%.
Bootstrap support for H2TS43 as seed ortholog is 100%.

Group of orthologs #343. Best score 58 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:58 T.rubripes:58

Q5JH94              	100.00%		H2TDY0              	100.00%
                    	       		H2U3W7              	25.23%
                    	       		H2URI4              	23.78%
Bootstrap support for Q5JH94 as seed ortholog is 100%.
Bootstrap support for H2TDY0 as seed ortholog is 100%.

Group of orthologs #344. Best score 58 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:58 T.rubripes:58

Q5JIY8              	100.00%		H2SW49              	100.00%
                    	       		O42387              	100.00%
Bootstrap support for Q5JIY8 as seed ortholog is 100%.
Bootstrap support for H2SW49 as seed ortholog is 100%.
Bootstrap support for O42387 as seed ortholog is 100%.

Group of orthologs #345. Best score 57 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:57 T.rubripes:8

Q5JIU7              	100.00%		H2TJM3              	100.00%
Q5JI19              	20.53%		
Bootstrap support for Q5JIU7 as seed ortholog is 100%.
Bootstrap support for H2TJM3 as seed ortholog is 74%.
Alternative seed ortholog is H2RMK1 (8 bits away from this cluster)

Group of orthologs #346. Best score 57 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:57 T.rubripes:1

Q5JIY4              	100.00%		H2SAS7              	100.00%
Bootstrap support for Q5JIY4 as seed ortholog is 100%.
Bootstrap support for H2SAS7 as seed ortholog is 51%.
Alternative seed ortholog is H2S053 (1 bits away from this cluster)

Group of orthologs #347. Best score 57 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:57 T.rubripes:57

Q5JJF5              	100.00%		H2USG6              	100.00%
Bootstrap support for Q5JJF5 as seed ortholog is 100%.
Bootstrap support for H2USG6 as seed ortholog is 100%.

Group of orthologs #348. Best score 57 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:57 T.rubripes:57

Q5JDG7              	100.00%		H2VC87              	100.00%
Bootstrap support for Q5JDG7 as seed ortholog is 100%.
Bootstrap support for H2VC87 as seed ortholog is 100%.

Group of orthologs #349. Best score 57 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:57 T.rubripes:57

Q5JIE1              	100.00%		H2VAM2              	100.00%
Bootstrap support for Q5JIE1 as seed ortholog is 100%.
Bootstrap support for H2VAM2 as seed ortholog is 100%.

Group of orthologs #350. Best score 56 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:56 T.rubripes:56

Q5JGM7              	100.00%		H2UPU7              	100.00%
Bootstrap support for Q5JGM7 as seed ortholog is 100%.
Bootstrap support for H2UPU7 as seed ortholog is 100%.

Group of orthologs #351. Best score 56 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:56 T.rubripes:56

Q5JF49              	100.00%		H2VE84              	100.00%
Bootstrap support for Q5JF49 as seed ortholog is 100%.
Bootstrap support for H2VE84 as seed ortholog is 100%.

Group of orthologs #352. Best score 55 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:55 T.rubripes:55

Q5JFG1              	100.00%		H2RVV5              	100.00%
Q5JHT0              	100.00%		
Bootstrap support for Q5JFG1 as seed ortholog is 100%.
Bootstrap support for Q5JHT0 as seed ortholog is 100%.
Bootstrap support for H2RVV5 as seed ortholog is 100%.

Group of orthologs #353. Best score 55 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:55 T.rubripes:55

Q5JDA5              	100.00%		H2SVV8              	100.00%
Bootstrap support for Q5JDA5 as seed ortholog is 100%.
Bootstrap support for H2SVV8 as seed ortholog is 100%.

Group of orthologs #354. Best score 54 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:54 T.rubripes:54

Q5JIL1              	100.00%		H2UDI6              	100.00%
Q5JGG3              	10.98%		
Bootstrap support for Q5JIL1 as seed ortholog is 100%.
Bootstrap support for H2UDI6 as seed ortholog is 100%.

Group of orthologs #355. Best score 54 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:54 T.rubripes:54

Q5JE86              	100.00%		H2T3A0              	100.00%
Bootstrap support for Q5JE86 as seed ortholog is 100%.
Bootstrap support for H2T3A0 as seed ortholog is 100%.

Group of orthologs #356. Best score 54 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:54 T.rubripes:54

Q5JGT6              	100.00%		H2TRP9              	100.00%
Bootstrap support for Q5JGT6 as seed ortholog is 100%.
Bootstrap support for H2TRP9 as seed ortholog is 100%.

Group of orthologs #357. Best score 54 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:54 T.rubripes:54

Q5JDR9              	100.00%		H2ULM8              	100.00%
Bootstrap support for Q5JDR9 as seed ortholog is 100%.
Bootstrap support for H2ULM8 as seed ortholog is 100%.

Group of orthologs #358. Best score 54 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:54 T.rubripes:54

Q5JFE3              	100.00%		H2URP2              	100.00%
Bootstrap support for Q5JFE3 as seed ortholog is 100%.
Bootstrap support for H2URP2 as seed ortholog is 100%.

Group of orthologs #359. Best score 53 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:53 T.rubripes:4

Q5JGZ1              	100.00%		H2T893              	100.00%
Q5JH08              	10.60%		H2RS88              	70.89%
                    	       		H2TYP5              	66.67%
Bootstrap support for Q5JGZ1 as seed ortholog is 100%.
Bootstrap support for H2T893 as seed ortholog is 54%.
Alternative seed ortholog is H2RQ67 (4 bits away from this cluster)

Group of orthologs #360. Best score 53 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:53 T.rubripes:53

Q5JHQ2              	100.00%		H2TQC1              	100.00%
Q5JGN8              	6.93%		H2T1Q3              	65.41%
                    	       		H2UK55              	28.32%
Bootstrap support for Q5JHQ2 as seed ortholog is 100%.
Bootstrap support for H2TQC1 as seed ortholog is 100%.

Group of orthologs #361. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 T.rubripes:52

Q5JJ66              	100.00%		H2SWN1              	100.00%
Q5JJ71              	5.75%		H2RPQ7              	11.63%
Bootstrap support for Q5JJ66 as seed ortholog is 100%.
Bootstrap support for H2SWN1 as seed ortholog is 100%.

Group of orthologs #362. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 T.rubripes:52

Q5JJG2              	100.00%		H2U2R8              	100.00%
Bootstrap support for Q5JJG2 as seed ortholog is 100%.
Bootstrap support for H2U2R8 as seed ortholog is 100%.

Group of orthologs #363. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 T.rubripes:52

Q5JE65              	100.00%		H2V4D5              	100.00%
Bootstrap support for Q5JE65 as seed ortholog is 100%.
Bootstrap support for H2V4D5 as seed ortholog is 100%.

Group of orthologs #364. Best score 51 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:51 T.rubripes:51

Q5JH78              	100.00%		H2SXU5              	100.00%
Bootstrap support for Q5JH78 as seed ortholog is 100%.
Bootstrap support for H2SXU5 as seed ortholog is 100%.

Group of orthologs #365. Best score 50 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:50 T.rubripes:50

Q5JEN3              	100.00%		H2S3V5              	100.00%
                    	       		H2U4X5              	100.00%
                    	       		H2SFL7              	70.45%
                    	       		H2VCN2              	28.98%
                    	       		H2UU08              	26.96%
                    	       		H2U054              	11.36%
Bootstrap support for Q5JEN3 as seed ortholog is 100%.
Bootstrap support for H2S3V5 as seed ortholog is 100%.
Bootstrap support for H2U4X5 as seed ortholog is 100%.

Group of orthologs #366. Best score 50 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:50 T.rubripes:8

Q8X270              	100.00%		H2TS85              	100.00%
                    	       		H2TBC2              	74.20%
                    	       		H2U3E0              	58.28%
Bootstrap support for Q8X270 as seed ortholog is 100%.
Bootstrap support for H2TS85 as seed ortholog is 63%.
Alternative seed ortholog is P0C599 (8 bits away from this cluster)

Group of orthologs #367. Best score 50 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:50 T.rubripes:50

Q5JDA4              	100.00%		H2TNT1              	100.00%
Bootstrap support for Q5JDA4 as seed ortholog is 100%.
Bootstrap support for H2TNT1 as seed ortholog is 100%.

Group of orthologs #368. Best score 49 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:49 T.rubripes:49

Q5JE50              	100.00%		H2TXE2              	100.00%
Bootstrap support for Q5JE50 as seed ortholog is 100%.
Bootstrap support for H2TXE2 as seed ortholog is 100%.

Group of orthologs #369. Best score 49 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:49 T.rubripes:2

Q5JIE0              	100.00%		H2UUG4              	100.00%
Bootstrap support for Q5JIE0 as seed ortholog is 100%.
Bootstrap support for H2UUG4 as seed ortholog is 61%.
Alternative seed ortholog is H2UMQ7 (2 bits away from this cluster)

Group of orthologs #370. Best score 48 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:48 T.rubripes:48

Q5JIR4              	100.00%		H2RMX7              	100.00%
Bootstrap support for Q5JIR4 as seed ortholog is 100%.
Bootstrap support for H2RMX7 as seed ortholog is 100%.

Group of orthologs #371. Best score 47 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:47 T.rubripes:47

Q5JGF8              	100.00%		H2U2L1              	100.00%
                    	       		H2SKV7              	69.21%
                    	       		H2V6I7              	67.91%
                    	       		H2T2J6              	60.62%
Bootstrap support for Q5JGF8 as seed ortholog is 100%.
Bootstrap support for H2U2L1 as seed ortholog is 100%.

Group of orthologs #372. Best score 47 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:47 T.rubripes:47

Q5JD73              	100.00%		H2S7S1              	100.00%
Bootstrap support for Q5JD73 as seed ortholog is 100%.
Bootstrap support for H2S7S1 as seed ortholog is 100%.

Group of orthologs #373. Best score 46 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:46 T.rubripes:46

Q5JJF7              	100.00%		H2SQU6              	100.00%
Bootstrap support for Q5JJF7 as seed ortholog is 100%.
Bootstrap support for H2SQU6 as seed ortholog is 100%.

Group of orthologs #374. Best score 45 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:45 T.rubripes:45

Q5JIR5              	100.00%		H2RM42              	100.00%
Bootstrap support for Q5JIR5 as seed ortholog is 100%.
Bootstrap support for H2RM42 as seed ortholog is 100%.

Group of orthologs #375. Best score 45 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:45 T.rubripes:45

Q5JGE0              	100.00%		H2TI94              	100.00%
Bootstrap support for Q5JGE0 as seed ortholog is 100%.
Bootstrap support for H2TI94 as seed ortholog is 100%.

Group of orthologs #376. Best score 44 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:44 T.rubripes:44

Q5JH23              	100.00%		H2T920              	100.00%
                    	       		H2ST11              	39.34%
Bootstrap support for Q5JH23 as seed ortholog is 100%.
Bootstrap support for H2T920 as seed ortholog is 100%.

Group of orthologs #377. Best score 44 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:44 T.rubripes:44

Q5JHR1              	100.00%		H2UYS8              	100.00%
Q5JFH5              	11.60%		
Bootstrap support for Q5JHR1 as seed ortholog is 100%.
Bootstrap support for H2UYS8 as seed ortholog is 100%.

Group of orthologs #378. Best score 44 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:44 T.rubripes:44

Q5JE48              	100.00%		H2SGL9              	100.00%
Bootstrap support for Q5JE48 as seed ortholog is 100%.
Bootstrap support for H2SGL9 as seed ortholog is 100%.

Group of orthologs #379. Best score 44 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:44 T.rubripes:44

Q5JFL6              	100.00%		H2TS58              	100.00%
Bootstrap support for Q5JFL6 as seed ortholog is 100%.
Bootstrap support for H2TS58 as seed ortholog is 100%.

Group of orthologs #380. Best score 44 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:44 T.rubripes:44

Q5JHG0              	100.00%		H2UX72              	100.00%
Bootstrap support for Q5JHG0 as seed ortholog is 100%.
Bootstrap support for H2UX72 as seed ortholog is 100%.

Group of orthologs #381. Best score 43 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:43 T.rubripes:43

Q5JE88              	100.00%		H2RNK5              	100.00%
Bootstrap support for Q5JE88 as seed ortholog is 100%.
Bootstrap support for H2RNK5 as seed ortholog is 100%.

Group of orthologs #382. Best score 43 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:43 T.rubripes:43

Q5JJE4              	100.00%		H2UAE0              	100.00%
Bootstrap support for Q5JJE4 as seed ortholog is 100%.
Bootstrap support for H2UAE0 as seed ortholog is 100%.

Group of orthologs #383. Best score 42 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:42 T.rubripes:42

Q5JFK7              	100.00%		H2RYS9              	100.00%
Bootstrap support for Q5JFK7 as seed ortholog is 100%.
Bootstrap support for H2RYS9 as seed ortholog is 100%.

Group of orthologs #384. Best score 42 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:42 T.rubripes:42

Q5JG60              	100.00%		H2T6P9              	100.00%
Bootstrap support for Q5JG60 as seed ortholog is 100%.
Bootstrap support for H2T6P9 as seed ortholog is 100%.

Group of orthologs #385. Best score 40 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:40 T.rubripes:40

Q5JDL4              	100.00%		H2URA8              	100.00%
Bootstrap support for Q5JDL4 as seed ortholog is 100%.
Bootstrap support for H2URA8 as seed ortholog is 100%.