###################################
382 groups of orthologs
434 in-paralogs from P.kodakaraensis
625 in-paralogs from T.nigroviridis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 838 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:838 T.nigroviridis:107

Q5JE32              	100.00%		H3CH30              	100.00%
Bootstrap support for Q5JE32 as seed ortholog is 100%.
Bootstrap support for H3CH30 as seed ortholog is 93%.

Group of orthologs #2. Best score 677 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:677 T.nigroviridis:338

Q5JE33              	100.00%		H3CXP9              	100.00%
Bootstrap support for Q5JE33 as seed ortholog is 100%.
Bootstrap support for H3CXP9 as seed ortholog is 100%.

Group of orthologs #3. Best score 638 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:638 T.nigroviridis:181

Q5JE98              	100.00%		H3DD70              	100.00%
Q9V2X2              	52.04%		
Bootstrap support for Q5JE98 as seed ortholog is 100%.
Bootstrap support for H3DD70 as seed ortholog is 99%.

Group of orthologs #4. Best score 574 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:574 T.nigroviridis:469

Q5JIR3              	100.00%		H3CXD7              	100.00%
Bootstrap support for Q5JIR3 as seed ortholog is 100%.
Bootstrap support for H3CXD7 as seed ortholog is 100%.

Group of orthologs #5. Best score 566 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:566 T.nigroviridis:417

Q5JIR2              	100.00%		H3CJW0              	100.00%
                    	       		H3D7W5              	75.81%
Bootstrap support for Q5JIR2 as seed ortholog is 100%.
Bootstrap support for H3CJW0 as seed ortholog is 100%.

Group of orthologs #6. Best score 552 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:552 T.nigroviridis:280

Q5JIS8              	100.00%		H3CMG9              	100.00%
Bootstrap support for Q5JIS8 as seed ortholog is 100%.
Bootstrap support for H3CMG9 as seed ortholog is 100%.

Group of orthologs #7. Best score 550 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:550 T.nigroviridis:468

Q5JDX6              	100.00%		H3CGA4              	100.00%
Bootstrap support for Q5JDX6 as seed ortholog is 100%.
Bootstrap support for H3CGA4 as seed ortholog is 100%.

Group of orthologs #8. Best score 540 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:540 T.nigroviridis:540

Q5JIG4              	100.00%		H3CWC8              	100.00%
Bootstrap support for Q5JIG4 as seed ortholog is 100%.
Bootstrap support for H3CWC8 as seed ortholog is 100%.

Group of orthologs #9. Best score 539 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:539 T.nigroviridis:370

Q5JDF4              	100.00%		H3C316              	100.00%
                    	       		H3CU51              	39.92%
Bootstrap support for Q5JDF4 as seed ortholog is 100%.
Bootstrap support for H3C316 as seed ortholog is 100%.

Group of orthologs #10. Best score 533 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:533 T.nigroviridis:533

Q5JGF1              	100.00%		H3CWR0              	100.00%
Bootstrap support for Q5JGF1 as seed ortholog is 100%.
Bootstrap support for H3CWR0 as seed ortholog is 100%.

Group of orthologs #11. Best score 525 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:525 T.nigroviridis:189

Q5JJ31              	100.00%		H3DBG3              	100.00%
Bootstrap support for Q5JJ31 as seed ortholog is 100%.
Bootstrap support for H3DBG3 as seed ortholog is 99%.

Group of orthologs #12. Best score 457 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:457 T.nigroviridis:457

Q5JCZ1              	100.00%		H3C9W2              	100.00%
Bootstrap support for Q5JCZ1 as seed ortholog is 100%.
Bootstrap support for H3C9W2 as seed ortholog is 100%.

Group of orthologs #13. Best score 453 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:453 T.nigroviridis:163

Q5JFZ4              	100.00%		H3CA98              	100.00%
                    	       		H3CA99              	65.90%
                    	       		H3CAA0              	65.13%
                    	       		H3CWS6              	64.93%
                    	       		H3DIC9              	45.47%
Bootstrap support for Q5JFZ4 as seed ortholog is 100%.
Bootstrap support for H3CA98 as seed ortholog is 99%.

Group of orthologs #14. Best score 450 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:370 T.nigroviridis:450

Q5JEV6              	100.00%		Q4RXG6              	100.00%
                    	       		H3CIH8              	70.22%
                    	       		H3CCD8              	61.99%
                    	       		H3CAK5              	32.45%
Bootstrap support for Q5JEV6 as seed ortholog is 100%.
Bootstrap support for Q4RXG6 as seed ortholog is 100%.

Group of orthologs #15. Best score 431 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:431 T.nigroviridis:283

Q8NKR7              	100.00%		H3DLI2              	100.00%
Bootstrap support for Q8NKR7 as seed ortholog is 100%.
Bootstrap support for H3DLI2 as seed ortholog is 100%.

Group of orthologs #16. Best score 418 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:418 T.nigroviridis:418

Q5JIP3              	100.00%		H3DPB7              	100.00%
Bootstrap support for Q5JIP3 as seed ortholog is 100%.
Bootstrap support for H3DPB7 as seed ortholog is 100%.

Group of orthologs #17. Best score 411 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:411 T.nigroviridis:104

O93623              	100.00%		H3CY30              	100.00%
                    	       		H3DKE5              	64.33%
Bootstrap support for O93623 as seed ortholog is 100%.
Bootstrap support for H3CY30 as seed ortholog is 96%.

Group of orthologs #18. Best score 394 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:394 T.nigroviridis:10

Q5JJA2              	100.00%		H3CQJ0              	100.00%
Bootstrap support for Q5JJA2 as seed ortholog is 100%.
Bootstrap support for H3CQJ0 as seed ortholog is 60%.
Alternative seed ortholog is H3DC94 (10 bits away from this cluster)

Group of orthologs #19. Best score 392 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:392 T.nigroviridis:23

Q52500              	100.00%		Q4SMY2              	100.00%
P61111              	100.00%		Q4T8U5              	100.00%
                    	       		H3CG97              	100.00%
Bootstrap support for Q52500 as seed ortholog is 100%.
Bootstrap support for P61111 as seed ortholog is 100%.
Bootstrap support for Q4SMY2 as seed ortholog is 71%.
Alternative seed ortholog is H3D8I7 (23 bits away from this cluster)
Bootstrap support for Q4T8U5 as seed ortholog is 72%.
Alternative seed ortholog is H3D8I7 (23 bits away from this cluster)
Bootstrap support for H3CG97 as seed ortholog is 64%.
Alternative seed ortholog is H3D8I7 (23 bits away from this cluster)

Group of orthologs #20. Best score 392 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:392 T.nigroviridis:392

Q5JGE5              	100.00%		Q4SLD9              	100.00%
Bootstrap support for Q5JGE5 as seed ortholog is 100%.
Bootstrap support for Q4SLD9 as seed ortholog is 100%.

Group of orthologs #21. Best score 382 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:382 T.nigroviridis:382

Q5JID8              	100.00%		H3D5C4              	100.00%
Bootstrap support for Q5JID8 as seed ortholog is 100%.
Bootstrap support for H3D5C4 as seed ortholog is 100%.

Group of orthologs #22. Best score 381 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:381 T.nigroviridis:225

Q5JDZ7              	100.00%		H3CNM9              	100.00%
Bootstrap support for Q5JDZ7 as seed ortholog is 100%.
Bootstrap support for H3CNM9 as seed ortholog is 99%.

Group of orthologs #23. Best score 370 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:370 T.nigroviridis:370

Q5JH71              	100.00%		H3CYS8              	100.00%
                    	       		H3CBE4              	56.28%
Bootstrap support for Q5JH71 as seed ortholog is 100%.
Bootstrap support for H3CYS8 as seed ortholog is 100%.

Group of orthologs #24. Best score 369 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:369 T.nigroviridis:15

Q5JHS5              	100.00%		H3DNK8              	100.00%
Bootstrap support for Q5JHS5 as seed ortholog is 100%.
Bootstrap support for H3DNK8 as seed ortholog is 64%.
Alternative seed ortholog is H3CI49 (15 bits away from this cluster)

Group of orthologs #25. Best score 357 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:176 T.nigroviridis:357

Q5JJC8              	100.00%		H3CA69              	100.00%
Bootstrap support for Q5JJC8 as seed ortholog is 100%.
Bootstrap support for H3CA69 as seed ortholog is 100%.

Group of orthologs #26. Best score 354 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:354 T.nigroviridis:119

Q5JFZ3              	100.00%		H3CZ59              	100.00%
                    	       		H3CIF0              	12.69%
Bootstrap support for Q5JFZ3 as seed ortholog is 100%.
Bootstrap support for H3CZ59 as seed ortholog is 93%.

Group of orthologs #27. Best score 349 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:349 T.nigroviridis:215

Q5JDL3              	100.00%		Q4T3B4              	100.00%
Bootstrap support for Q5JDL3 as seed ortholog is 100%.
Bootstrap support for Q4T3B4 as seed ortholog is 100%.

Group of orthologs #28. Best score 344 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:344 T.nigroviridis:281

Q5JD45              	100.00%		H3CGN6              	100.00%
Bootstrap support for Q5JD45 as seed ortholog is 100%.
Bootstrap support for H3CGN6 as seed ortholog is 100%.

Group of orthologs #29. Best score 337 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:337 T.nigroviridis:12

Q5JIT1              	100.00%		H3CSW2              	100.00%
Bootstrap support for Q5JIT1 as seed ortholog is 100%.
Bootstrap support for H3CSW2 as seed ortholog is 60%.
Alternative seed ortholog is H3DJD9 (12 bits away from this cluster)

Group of orthologs #30. Best score 332 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:332 T.nigroviridis:332

Q5JED2              	100.00%		H3CM65              	100.00%
                    	       		H3DMF5              	20.44%
                    	       		H3DCE5              	19.71%
Bootstrap support for Q5JED2 as seed ortholog is 100%.
Bootstrap support for H3CM65 as seed ortholog is 100%.

Group of orthologs #31. Best score 318 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:318 T.nigroviridis:318

Q5JFN4              	100.00%		Q4RKX4              	100.00%
Bootstrap support for Q5JFN4 as seed ortholog is 100%.
Bootstrap support for Q4RKX4 as seed ortholog is 100%.

Group of orthologs #32. Best score 305 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:305 T.nigroviridis:305

Q5JEP3              	100.00%		H3DIS3              	100.00%
Bootstrap support for Q5JEP3 as seed ortholog is 100%.
Bootstrap support for H3DIS3 as seed ortholog is 100%.

Group of orthologs #33. Best score 301 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:301 T.nigroviridis:207

Q5JEW3              	100.00%		Q4SY05              	100.00%
Bootstrap support for Q5JEW3 as seed ortholog is 100%.
Bootstrap support for Q4SY05 as seed ortholog is 100%.

Group of orthologs #34. Best score 299 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:299 T.nigroviridis:185

Q5JJ98              	100.00%		H3DIS1              	100.00%
Bootstrap support for Q5JJ98 as seed ortholog is 100%.
Bootstrap support for H3DIS1 as seed ortholog is 99%.

Group of orthologs #35. Best score 296 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:296 T.nigroviridis:74

Q5JFK3              	100.00%		H3DF65              	100.00%
Bootstrap support for Q5JFK3 as seed ortholog is 100%.
Bootstrap support for H3DF65 as seed ortholog is 88%.

Group of orthologs #36. Best score 295 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:295 T.nigroviridis:66

Q5JGN7              	100.00%		H3C5W5              	100.00%
                    	       		H3CRE9              	100.00%
Bootstrap support for Q5JGN7 as seed ortholog is 100%.
Bootstrap support for H3C5W5 as seed ortholog is 82%.
Bootstrap support for H3CRE9 as seed ortholog is 81%.

Group of orthologs #37. Best score 290 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:290 T.nigroviridis:290

Q5JJH1              	100.00%		H3CNR7              	100.00%
Bootstrap support for Q5JJH1 as seed ortholog is 100%.
Bootstrap support for H3CNR7 as seed ortholog is 100%.

Group of orthologs #38. Best score 289 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:207 T.nigroviridis:182

Q5JET4              	100.00%		H3D5W7              	100.00%
                    	       		H3DPE0              	9.66%
Bootstrap support for Q5JET4 as seed ortholog is 100%.
Bootstrap support for H3D5W7 as seed ortholog is 100%.

Group of orthologs #39. Best score 287 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:287 T.nigroviridis:287

Q76I93              	100.00%		H3C338              	100.00%
                    	       		Q4SNA4              	53.21%
Bootstrap support for Q76I93 as seed ortholog is 100%.
Bootstrap support for H3C338 as seed ortholog is 100%.

Group of orthologs #40. Best score 286 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:286 T.nigroviridis:79

Q5JE75              	100.00%		Q4TDL9              	100.00%
Bootstrap support for Q5JE75 as seed ortholog is 100%.
Bootstrap support for Q4TDL9 as seed ortholog is 95%.

Group of orthologs #41. Best score 272 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:128 T.nigroviridis:272

Q5JHX4              	100.00%		H3BYG0              	100.00%
                    	       		H3CUP5              	41.67%
Bootstrap support for Q5JHX4 as seed ortholog is 99%.
Bootstrap support for H3BYG0 as seed ortholog is 100%.

Group of orthologs #42. Best score 272 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:272 T.nigroviridis:76

Q5JFM0              	100.00%		H3D3A4              	100.00%
                    	       		H3DKS6              	77.79%
Bootstrap support for Q5JFM0 as seed ortholog is 100%.
Bootstrap support for H3D3A4 as seed ortholog is 98%.

Group of orthologs #43. Best score 272 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:159 T.nigroviridis:272

Q5JI16              	100.00%		H3D8R8              	100.00%
Bootstrap support for Q5JI16 as seed ortholog is 99%.
Bootstrap support for H3D8R8 as seed ortholog is 100%.

Group of orthologs #44. Best score 271 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:199 T.nigroviridis:66

Q5JHC1              	100.00%		H3C920              	100.00%
Bootstrap support for Q5JHC1 as seed ortholog is 99%.
Bootstrap support for H3C920 as seed ortholog is 92%.

Group of orthologs #45. Best score 269 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:269 T.nigroviridis:133

Q5JHX1              	100.00%		H3CW61              	100.00%
Bootstrap support for Q5JHX1 as seed ortholog is 100%.
Bootstrap support for H3CW61 as seed ortholog is 99%.

Group of orthologs #46. Best score 264 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:199 T.nigroviridis:89

Q52428              	100.00%		H3D084              	100.00%
Bootstrap support for Q52428 as seed ortholog is 100%.
Bootstrap support for H3D084 as seed ortholog is 97%.

Group of orthologs #47. Best score 259 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:259 T.nigroviridis:26

Q5JFZ6              	100.00%		H3CB69              	100.00%
                    	       		H3CPM8              	39.53%
                    	       		H3CQV7              	28.98%
Bootstrap support for Q5JFZ6 as seed ortholog is 100%.
Bootstrap support for H3CB69 as seed ortholog is 74%.
Alternative seed ortholog is H3CL71 (26 bits away from this cluster)

Group of orthologs #48. Best score 259 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:118 T.nigroviridis:74

Q5JEZ2              	100.00%		H3D9N7              	100.00%
                    	       		Q4RK97              	39.84%
Bootstrap support for Q5JEZ2 as seed ortholog is 99%.
Bootstrap support for H3D9N7 as seed ortholog is 98%.

Group of orthologs #49. Best score 255 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:255 T.nigroviridis:255

O59650              	100.00%		H3D758              	100.00%
                    	       		H3CID6              	81.19%
Bootstrap support for O59650 as seed ortholog is 100%.
Bootstrap support for H3D758 as seed ortholog is 100%.

Group of orthologs #50. Best score 251 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:251 T.nigroviridis:251

Q5JEY0              	100.00%		H3CCA8              	100.00%
Bootstrap support for Q5JEY0 as seed ortholog is 100%.
Bootstrap support for H3CCA8 as seed ortholog is 100%.

Group of orthologs #51. Best score 250 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:250 T.nigroviridis:250

Q5JF43              	100.00%		H3D981              	100.00%
Bootstrap support for Q5JF43 as seed ortholog is 100%.
Bootstrap support for H3D981 as seed ortholog is 100%.

Group of orthologs #52. Best score 243 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:243 T.nigroviridis:243

Q5JGK6              	100.00%		H3CCP7              	100.00%
Bootstrap support for Q5JGK6 as seed ortholog is 100%.
Bootstrap support for H3CCP7 as seed ortholog is 100%.

Group of orthologs #53. Best score 243 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:243 T.nigroviridis:243

Q5JHC6              	100.00%		H3DF39              	100.00%
Bootstrap support for Q5JHC6 as seed ortholog is 100%.
Bootstrap support for H3DF39 as seed ortholog is 100%.

Group of orthologs #54. Best score 240 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:240 T.nigroviridis:126

Q5JCX7              	100.00%		H3CX69              	100.00%
                    	       		H3CI52              	38.16%
Bootstrap support for Q5JCX7 as seed ortholog is 100%.
Bootstrap support for H3CX69 as seed ortholog is 100%.

Group of orthologs #55. Best score 235 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:235 T.nigroviridis:235

Q76KA7              	100.00%		H3D9Y4              	100.00%
Bootstrap support for Q76KA7 as seed ortholog is 100%.
Bootstrap support for H3D9Y4 as seed ortholog is 100%.

Group of orthologs #56. Best score 234 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:80 T.nigroviridis:51

Q5JGC4              	100.00%		H3DHP8              	100.00%
Bootstrap support for Q5JGC4 as seed ortholog is 99%.
Bootstrap support for H3DHP8 as seed ortholog is 96%.

Group of orthologs #57. Best score 233 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:233 T.nigroviridis:233

Q5JE24              	100.00%		H3CL93              	100.00%
Bootstrap support for Q5JE24 as seed ortholog is 100%.
Bootstrap support for H3CL93 as seed ortholog is 100%.

Group of orthologs #58. Best score 231 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:231 T.nigroviridis:6

Q5JJ64              	100.00%		H3BZX9              	100.00%
                    	       		H3CS25              	23.94%
Bootstrap support for Q5JJ64 as seed ortholog is 100%.
Bootstrap support for H3BZX9 as seed ortholog is 45%.
Alternative seed ortholog is H3DMX5 (6 bits away from this cluster)

Group of orthologs #59. Best score 231 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:231 T.nigroviridis:231

Q5JDJ5              	100.00%		H3DIP3              	100.00%
Bootstrap support for Q5JDJ5 as seed ortholog is 100%.
Bootstrap support for H3DIP3 as seed ortholog is 100%.

Group of orthologs #60. Best score 229 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:229 T.nigroviridis:229

Q5JI40              	100.00%		H3C245              	100.00%
Bootstrap support for Q5JI40 as seed ortholog is 100%.
Bootstrap support for H3C245 as seed ortholog is 100%.

Group of orthologs #61. Best score 227 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:227 T.nigroviridis:227

Q5JGQ7              	100.00%		Q4TBL7              	100.00%
                    	       		H3CUP7              	39.84%
Bootstrap support for Q5JGQ7 as seed ortholog is 100%.
Bootstrap support for Q4TBL7 as seed ortholog is 100%.

Group of orthologs #62. Best score 224 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:224 T.nigroviridis:2

Q5JHP3              	100.00%		H3CWE5              	100.00%
                    	       		H3DGV4              	62.47%
Bootstrap support for Q5JHP3 as seed ortholog is 100%.
Bootstrap support for H3CWE5 as seed ortholog is 47%.
Alternative seed ortholog is H3CJG0 (2 bits away from this cluster)

Group of orthologs #63. Best score 224 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:224 T.nigroviridis:157

Q5JDH2              	100.00%		H3CI86              	100.00%
Bootstrap support for Q5JDH2 as seed ortholog is 100%.
Bootstrap support for H3CI86 as seed ortholog is 100%.

Group of orthologs #64. Best score 217 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:217 T.nigroviridis:42

Q5JG59              	100.00%		H3CIK1              	100.00%
                    	       		H3DJE1              	10.55%
                    	       		Q4RR92              	7.88%
                    	       		H3CNB8              	7.03%
                    	       		H3CM10              	6.47%
                    	       		Q4SZC3              	5.91%
                    	       		H3CLV3              	5.91%
Bootstrap support for Q5JG59 as seed ortholog is 100%.
Bootstrap support for H3CIK1 as seed ortholog is 83%.

Group of orthologs #65. Best score 217 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:217 T.nigroviridis:217

Q5JH24              	100.00%		H3D4E7              	100.00%
                    	       		H3C2X6              	11.01%
Bootstrap support for Q5JH24 as seed ortholog is 100%.
Bootstrap support for H3D4E7 as seed ortholog is 100%.

Group of orthologs #66. Best score 216 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:216 T.nigroviridis:216

Q6F494              	100.00%		H3DJD4              	100.00%
                    	       		H3CIG8              	58.01%
Bootstrap support for Q6F494 as seed ortholog is 100%.
Bootstrap support for H3DJD4 as seed ortholog is 100%.

Group of orthologs #67. Best score 215 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:215 T.nigroviridis:146

Q5JFW3              	100.00%		H3DQ20              	100.00%
Bootstrap support for Q5JFW3 as seed ortholog is 100%.
Bootstrap support for H3DQ20 as seed ortholog is 99%.

Group of orthologs #68. Best score 213 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:213 T.nigroviridis:213

Q76KA8              	100.00%		H3CSC6              	100.00%
Bootstrap support for Q76KA8 as seed ortholog is 100%.
Bootstrap support for H3CSC6 as seed ortholog is 100%.

Group of orthologs #69. Best score 211 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:211 T.nigroviridis:211

Q5JGV6              	100.00%		H3CJF1              	100.00%
                    	       		H3DKC6              	9.68%
Bootstrap support for Q5JGV6 as seed ortholog is 100%.
Bootstrap support for H3CJF1 as seed ortholog is 100%.

Group of orthologs #70. Best score 211 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:211 T.nigroviridis:99

Q5JEK8              	100.00%		H3CAN5              	100.00%
Bootstrap support for Q5JEK8 as seed ortholog is 100%.
Bootstrap support for H3CAN5 as seed ortholog is 98%.

Group of orthologs #71. Best score 209 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:209 T.nigroviridis:209

Q5JFN1              	100.00%		Q4S9B4              	100.00%
Bootstrap support for Q5JFN1 as seed ortholog is 100%.
Bootstrap support for Q4S9B4 as seed ortholog is 100%.

Group of orthologs #72. Best score 208 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:208 T.nigroviridis:208

Q5JD37              	100.00%		H3DK42              	100.00%
                    	       		H3D431              	53.96%
Bootstrap support for Q5JD37 as seed ortholog is 100%.
Bootstrap support for H3DK42 as seed ortholog is 100%.

Group of orthologs #73. Best score 207 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:207 T.nigroviridis:207

Q5JDJ0              	100.00%		H3DKX4              	100.00%
                    	       		H3D119              	71.84%
Bootstrap support for Q5JDJ0 as seed ortholog is 100%.
Bootstrap support for H3DKX4 as seed ortholog is 100%.

Group of orthologs #74. Best score 205 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:205 T.nigroviridis:73

Q5JEW1              	100.00%		H3CPZ4              	100.00%
Q5JGG6              	13.65%		H3CYT8              	9.56%
                    	       		H3C919              	5.28%
Bootstrap support for Q5JEW1 as seed ortholog is 100%.
Bootstrap support for H3CPZ4 as seed ortholog is 92%.

Group of orthologs #75. Best score 205 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:205 T.nigroviridis:81

Q5JFN0              	100.00%		H3CZA5              	100.00%
Bootstrap support for Q5JFN0 as seed ortholog is 100%.
Bootstrap support for H3CZA5 as seed ortholog is 99%.

Group of orthologs #76. Best score 205 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:205 T.nigroviridis:127

Q5JJ82              	100.00%		H3D6C5              	100.00%
Bootstrap support for Q5JJ82 as seed ortholog is 100%.
Bootstrap support for H3D6C5 as seed ortholog is 99%.

Group of orthologs #77. Best score 203 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:203 T.nigroviridis:203

Q5JGG5              	100.00%		H3CQD9              	100.00%
                    	       		H3DH22              	57.81%
                    	       		H3CTQ3              	39.35%
                    	       		H3CZF8              	35.02%
                    	       		H3D875              	30.80%
                    	       		H3C249              	15.30%
Bootstrap support for Q5JGG5 as seed ortholog is 100%.
Bootstrap support for H3CQD9 as seed ortholog is 100%.

Group of orthologs #78. Best score 203 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:203 T.nigroviridis:121

Q5JIQ0              	100.00%		H3CGK0              	100.00%
Bootstrap support for Q5JIQ0 as seed ortholog is 100%.
Bootstrap support for H3CGK0 as seed ortholog is 99%.

Group of orthologs #79. Best score 203 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:203 T.nigroviridis:25

Q5JIU9              	100.00%		H3DCN4              	100.00%
Bootstrap support for Q5JIU9 as seed ortholog is 100%.
Bootstrap support for H3DCN4 as seed ortholog is 75%.

Group of orthologs #80. Best score 202 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:57 T.nigroviridis:202

Q5JGG2              	100.00%		H3CDX4              	100.00%
Bootstrap support for Q5JGG2 as seed ortholog is 92%.
Bootstrap support for H3CDX4 as seed ortholog is 100%.

Group of orthologs #81. Best score 201 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:201 T.nigroviridis:51

Q5JE76              	100.00%		H3DC07              	100.00%
                    	       		H3CAJ3              	72.54%
                    	       		Q4T5A1              	13.50%
                    	       		H3DJT3              	10.76%
                    	       		H3CTW0              	10.07%
Bootstrap support for Q5JE76 as seed ortholog is 100%.
Bootstrap support for H3DC07 as seed ortholog is 91%.

Group of orthologs #82. Best score 201 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:201 T.nigroviridis:100

Q5JG47              	100.00%		H3D444              	100.00%
Bootstrap support for Q5JG47 as seed ortholog is 100%.
Bootstrap support for H3D444 as seed ortholog is 99%.

Group of orthologs #83. Best score 201 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:201 T.nigroviridis:149

Q5JGF4              	100.00%		Q4SNJ7              	100.00%
Bootstrap support for Q5JGF4 as seed ortholog is 100%.
Bootstrap support for Q4SNJ7 as seed ortholog is 99%.

Group of orthologs #84. Best score 199 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:199 T.nigroviridis:199

Q5JJ43              	100.00%		H3CQM3              	100.00%
Bootstrap support for Q5JJ43 as seed ortholog is 100%.
Bootstrap support for H3CQM3 as seed ortholog is 100%.

Group of orthologs #85. Best score 198 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:115 T.nigroviridis:22

Q5JDD8              	100.00%		H3CP24              	100.00%
Bootstrap support for Q5JDD8 as seed ortholog is 99%.
Bootstrap support for H3CP24 as seed ortholog is 72%.
Alternative seed ortholog is H3D5I6 (22 bits away from this cluster)

Group of orthologs #86. Best score 197 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:197 T.nigroviridis:197

Q5JGE1              	100.00%		H3D3H9              	100.00%
Bootstrap support for Q5JGE1 as seed ortholog is 100%.
Bootstrap support for H3D3H9 as seed ortholog is 100%.

Group of orthologs #87. Best score 196 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:124 T.nigroviridis:116

Q5JF51              	100.00%		H3BXF4              	100.00%
Q5JHU0              	25.99%		H3D8B7              	40.81%
Bootstrap support for Q5JF51 as seed ortholog is 99%.
Bootstrap support for H3BXF4 as seed ortholog is 99%.

Group of orthologs #88. Best score 196 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:196 T.nigroviridis:196

Q5JH48              	100.00%		H3CYS0              	100.00%
Bootstrap support for Q5JH48 as seed ortholog is 100%.
Bootstrap support for H3CYS0 as seed ortholog is 100%.

Group of orthologs #89. Best score 189 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:189 T.nigroviridis:189

Q5JID0              	100.00%		H3CQP4              	100.00%
                    	       		H3CWY8              	47.66%
                    	       		H3D1D4              	24.79%
                    	       		H3CNC2              	23.95%
                    	       		H3C9D6              	22.99%
                    	       		H3CEG4              	22.75%
                    	       		H3CHW1              	22.40%
                    	       		H3CHL5              	21.20%
                    	       		H3CBF0              	20.60%
                    	       		H3DBP4              	15.09%
Bootstrap support for Q5JID0 as seed ortholog is 100%.
Bootstrap support for H3CQP4 as seed ortholog is 100%.

Group of orthologs #90. Best score 186 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:186 T.nigroviridis:63

Q5JHT1              	100.00%		H3BWC3              	100.00%
                    	       		H3CWZ2              	30.44%
Bootstrap support for Q5JHT1 as seed ortholog is 100%.
Bootstrap support for H3BWC3 as seed ortholog is 96%.

Group of orthologs #91. Best score 186 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:140 T.nigroviridis:146

Q5JFM8              	100.00%		H3CC58              	100.00%
Bootstrap support for Q5JFM8 as seed ortholog is 99%.
Bootstrap support for H3CC58 as seed ortholog is 99%.

Group of orthologs #92. Best score 185 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:185 T.nigroviridis:185

Q5JFV8              	100.00%		Q4SM08              	100.00%
                    	       		H3D0K2              	17.69%
                    	       		H3DCA0              	15.70%
Bootstrap support for Q5JFV8 as seed ortholog is 100%.
Bootstrap support for Q4SM08 as seed ortholog is 100%.

Group of orthologs #93. Best score 184 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:184 T.nigroviridis:184

Q5JF06              	100.00%		H3CL90              	100.00%
                    	       		H3CNM2              	52.41%
Bootstrap support for Q5JF06 as seed ortholog is 100%.
Bootstrap support for H3CL90 as seed ortholog is 100%.

Group of orthologs #94. Best score 183 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:183 T.nigroviridis:183

Q5JIL7              	100.00%		H3CEF1              	100.00%
Bootstrap support for Q5JIL7 as seed ortholog is 100%.
Bootstrap support for H3CEF1 as seed ortholog is 100%.

Group of orthologs #95. Best score 179 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:179 T.nigroviridis:179

Q5JFE7              	100.00%		H3CGK5              	100.00%
Bootstrap support for Q5JFE7 as seed ortholog is 100%.
Bootstrap support for H3CGK5 as seed ortholog is 100%.

Group of orthologs #96. Best score 178 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:178 T.nigroviridis:112

Q5JIR6              	100.00%		H3CSX5              	100.00%
Bootstrap support for Q5JIR6 as seed ortholog is 100%.
Bootstrap support for H3CSX5 as seed ortholog is 99%.

Group of orthologs #97. Best score 178 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:178 T.nigroviridis:178

P77933              	100.00%		H3D242              	100.00%
Bootstrap support for P77933 as seed ortholog is 100%.
Bootstrap support for H3D242 as seed ortholog is 100%.

Group of orthologs #98. Best score 178 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:178 T.nigroviridis:102

Q5JF38              	100.00%		H3D1Q6              	100.00%
Bootstrap support for Q5JF38 as seed ortholog is 100%.
Bootstrap support for H3D1Q6 as seed ortholog is 99%.

Group of orthologs #99. Best score 177 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:177 T.nigroviridis:177

Q5JH43              	100.00%		Q4SGI0              	100.00%
Bootstrap support for Q5JH43 as seed ortholog is 100%.
Bootstrap support for Q4SGI0 as seed ortholog is 100%.

Group of orthologs #100. Best score 175 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:175 T.nigroviridis:68

Q5JGD1              	100.00%		H3BYG8              	100.00%
                    	       		H3D560              	67.00%
Bootstrap support for Q5JGD1 as seed ortholog is 100%.
Bootstrap support for H3BYG8 as seed ortholog is 96%.

Group of orthologs #101. Best score 175 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:175 T.nigroviridis:99

Q5JJF3              	100.00%		H3CQ87              	100.00%
Bootstrap support for Q5JJF3 as seed ortholog is 100%.
Bootstrap support for H3CQ87 as seed ortholog is 100%.

Group of orthologs #102. Best score 175 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:175 T.nigroviridis:175

Q5JG03              	100.00%		Q4RKM7              	100.00%
Bootstrap support for Q5JG03 as seed ortholog is 100%.
Bootstrap support for Q4RKM7 as seed ortholog is 100%.

Group of orthologs #103. Best score 174 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:174 T.nigroviridis:95

Q5JGS4              	100.00%		H3CAA7              	100.00%
Bootstrap support for Q5JGS4 as seed ortholog is 100%.
Bootstrap support for H3CAA7 as seed ortholog is 99%.

Group of orthologs #104. Best score 171 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:171 T.nigroviridis:117

Q5JGN1              	100.00%		H3CNC7              	100.00%
P58109              	57.83%		
Bootstrap support for Q5JGN1 as seed ortholog is 100%.
Bootstrap support for H3CNC7 as seed ortholog is 99%.

Group of orthologs #105. Best score 171 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:171 T.nigroviridis:171

Q5JIG7              	100.00%		H3CQC0              	100.00%
Bootstrap support for Q5JIG7 as seed ortholog is 100%.
Bootstrap support for H3CQC0 as seed ortholog is 100%.

Group of orthologs #106. Best score 170 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:170 T.nigroviridis:170

Q5JDG3              	100.00%		H3CHM0              	100.00%
Bootstrap support for Q5JDG3 as seed ortholog is 100%.
Bootstrap support for H3CHM0 as seed ortholog is 100%.

Group of orthologs #107. Best score 169 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:98 T.nigroviridis:36

Q5JE21              	100.00%		H3CTV1              	100.00%
Bootstrap support for Q5JE21 as seed ortholog is 98%.
Bootstrap support for H3CTV1 as seed ortholog is 80%.

Group of orthologs #108. Best score 165 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:165 T.nigroviridis:165

Q5JF26              	100.00%		H3BZS9              	100.00%
Q5JGM9              	18.95%		
Bootstrap support for Q5JF26 as seed ortholog is 100%.
Bootstrap support for H3BZS9 as seed ortholog is 100%.

Group of orthologs #109. Best score 165 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:165 T.nigroviridis:12

Q5JIB3              	100.00%		H3CJ04              	100.00%
Bootstrap support for Q5JIB3 as seed ortholog is 100%.
Bootstrap support for H3CJ04 as seed ortholog is 44%.
Alternative seed ortholog is H3DN92 (12 bits away from this cluster)

Group of orthologs #110. Best score 165 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:165 T.nigroviridis:165

Q5JEP5              	100.00%		H3DD41              	100.00%
Bootstrap support for Q5JEP5 as seed ortholog is 100%.
Bootstrap support for H3DD41 as seed ortholog is 100%.

Group of orthologs #111. Best score 164 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:164 T.nigroviridis:54

Q5JI69              	100.00%		H3CVH9              	100.00%
Bootstrap support for Q5JI69 as seed ortholog is 100%.
Bootstrap support for H3CVH9 as seed ortholog is 90%.

Group of orthologs #112. Best score 163 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:163 T.nigroviridis:163

Q5JDV8              	100.00%		H3C7X4              	100.00%
Q5JIM8              	10.84%		
Bootstrap support for Q5JDV8 as seed ortholog is 100%.
Bootstrap support for H3C7X4 as seed ortholog is 100%.

Group of orthologs #113. Best score 163 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:163 T.nigroviridis:20

Q5JIR7              	100.00%		H3CG73              	100.00%
Bootstrap support for Q5JIR7 as seed ortholog is 100%.
Bootstrap support for H3CG73 as seed ortholog is 74%.
Alternative seed ortholog is H3CD88 (20 bits away from this cluster)

Group of orthologs #114. Best score 161 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:30 T.nigroviridis:38

Q5JIE4              	100.00%		H3D8P7              	100.00%
Bootstrap support for Q5JIE4 as seed ortholog is 78%.
Bootstrap support for H3D8P7 as seed ortholog is 85%.

Group of orthologs #115. Best score 161 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:161 T.nigroviridis:161

Q5JFG9              	100.00%		Q4RVM5              	100.00%
Bootstrap support for Q5JFG9 as seed ortholog is 100%.
Bootstrap support for Q4RVM5 as seed ortholog is 100%.

Group of orthologs #116. Best score 160 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:49 T.nigroviridis:73

Q5JI97              	100.00%		H3DJE4              	100.00%
                    	       		H3D087              	6.35%
Bootstrap support for Q5JI97 as seed ortholog is 86%.
Bootstrap support for H3DJE4 as seed ortholog is 99%.

Group of orthologs #117. Best score 159 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:159 T.nigroviridis:40

Q5JF69              	100.00%		H3CWK0              	100.00%
                    	       		H3C0X3              	28.49%
                    	       		H3C771              	28.19%
                    	       		H3D169              	27.96%
                    	       		H3DBM4              	26.84%
                    	       		Q4RQS5              	18.78%
                    	       		H3D2V4              	13.03%
                    	       		H3CTK4              	11.32%
Bootstrap support for Q5JF69 as seed ortholog is 100%.
Bootstrap support for H3CWK0 as seed ortholog is 83%.

Group of orthologs #118. Best score 159 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:159 T.nigroviridis:159

Q5JDV2              	100.00%		H3C7Z5              	100.00%
                    	       		H3C8B4              	8.38%
Bootstrap support for Q5JDV2 as seed ortholog is 100%.
Bootstrap support for H3C7Z5 as seed ortholog is 100%.

Group of orthologs #119. Best score 159 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:159 T.nigroviridis:159

Q5JH96              	100.00%		H3DA69              	100.00%
                    	       		H3DPG5              	9.10%
Bootstrap support for Q5JH96 as seed ortholog is 100%.
Bootstrap support for H3DA69 as seed ortholog is 100%.

Group of orthologs #120. Best score 159 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:159 T.nigroviridis:159

Q5JFX8              	100.00%		H3DP28              	100.00%
Bootstrap support for Q5JFX8 as seed ortholog is 100%.
Bootstrap support for H3DP28 as seed ortholog is 100%.

Group of orthologs #121. Best score 159 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:159 T.nigroviridis:159

Q5JJG1              	100.00%		Q4TBS0              	100.00%
Bootstrap support for Q5JJG1 as seed ortholog is 100%.
Bootstrap support for Q4TBS0 as seed ortholog is 100%.

Group of orthologs #122. Best score 158 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:158 T.nigroviridis:158

Q5JIE6              	100.00%		H3CZM5              	100.00%
                    	       		H3DHY0              	100.00%
                    	       		H3DJA4              	69.28%
Bootstrap support for Q5JIE6 as seed ortholog is 100%.
Bootstrap support for H3CZM5 as seed ortholog is 100%.
Bootstrap support for H3DHY0 as seed ortholog is 100%.

Group of orthologs #123. Best score 157 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:157 T.nigroviridis:84

Q5JGN0              	100.00%		H3CB72              	100.00%
Bootstrap support for Q5JGN0 as seed ortholog is 100%.
Bootstrap support for H3CB72 as seed ortholog is 98%.

Group of orthologs #124. Best score 157 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:157 T.nigroviridis:157

Q5JHN5              	100.00%		H3CU19              	100.00%
Bootstrap support for Q5JHN5 as seed ortholog is 100%.
Bootstrap support for H3CU19 as seed ortholog is 100%.

Group of orthologs #125. Best score 156 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:156 T.nigroviridis:92

Q5JE20              	100.00%		H3C9J8              	100.00%
Bootstrap support for Q5JE20 as seed ortholog is 100%.
Bootstrap support for H3C9J8 as seed ortholog is 99%.

Group of orthologs #126. Best score 155 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:155 T.nigroviridis:8

Q9HHC4              	100.00%		H3CYB9              	100.00%
Bootstrap support for Q9HHC4 as seed ortholog is 100%.
Bootstrap support for H3CYB9 as seed ortholog is 48%.
Alternative seed ortholog is H3BZA6 (8 bits away from this cluster)

Group of orthologs #127. Best score 154 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:154 T.nigroviridis:154

Q5JH26              	100.00%		H3CYY4              	100.00%
Bootstrap support for Q5JH26 as seed ortholog is 100%.
Bootstrap support for H3CYY4 as seed ortholog is 100%.

Group of orthologs #128. Best score 153 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:153 T.nigroviridis:153

Q5JJG8              	100.00%		H3DKX6              	100.00%
Bootstrap support for Q5JJG8 as seed ortholog is 100%.
Bootstrap support for H3DKX6 as seed ortholog is 100%.

Group of orthologs #129. Best score 152 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:152 T.nigroviridis:81

Q5JEQ6              	100.00%		H3DL06              	100.00%
Q5JJB8              	25.59%		
Bootstrap support for Q5JEQ6 as seed ortholog is 100%.
Bootstrap support for H3DL06 as seed ortholog is 98%.

Group of orthologs #130. Best score 152 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:152 T.nigroviridis:152

Q5JDB4              	100.00%		H3CRI4              	100.00%
Bootstrap support for Q5JDB4 as seed ortholog is 100%.
Bootstrap support for H3CRI4 as seed ortholog is 100%.

Group of orthologs #131. Best score 152 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:152 T.nigroviridis:152

Q5JIM2              	100.00%		H3DPY4              	100.00%
Bootstrap support for Q5JIM2 as seed ortholog is 100%.
Bootstrap support for H3DPY4 as seed ortholog is 100%.

Group of orthologs #132. Best score 151 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:151 T.nigroviridis:151

Q5JDI0              	100.00%		H3CSM9              	100.00%
Bootstrap support for Q5JDI0 as seed ortholog is 100%.
Bootstrap support for H3CSM9 as seed ortholog is 100%.

Group of orthologs #133. Best score 151 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:151 T.nigroviridis:151

Q5JFR0              	100.00%		Q4RLG4              	100.00%
Bootstrap support for Q5JFR0 as seed ortholog is 100%.
Bootstrap support for Q4RLG4 as seed ortholog is 100%.

Group of orthologs #134. Best score 150 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:150 T.nigroviridis:150

Q5JEZ9              	100.00%		H3DNF2              	100.00%
Q5JH45              	5.54%		H3C9C5              	23.13%
                    	       		H3BZ95              	22.20%
                    	       		H3DJZ2              	16.67%
                    	       		H3CSU7              	16.28%
                    	       		H3D2Q9              	14.56%
                    	       		H3BWW1              	11.84%
                    	       		Q4RI78              	8.96%
                    	       		H3DAL2              	5.45%
Bootstrap support for Q5JEZ9 as seed ortholog is 100%.
Bootstrap support for H3DNF2 as seed ortholog is 100%.

Group of orthologs #135. Best score 150 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:150 T.nigroviridis:40

Q5JH16              	100.00%		H3DKM7              	100.00%
Bootstrap support for Q5JH16 as seed ortholog is 100%.
Bootstrap support for H3DKM7 as seed ortholog is 79%.

Group of orthologs #136. Best score 149 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:149 T.nigroviridis:149

Q5JGH7              	100.00%		H3DG60              	100.00%
                    	       		H3CQA0              	5.16%
Bootstrap support for Q5JGH7 as seed ortholog is 100%.
Bootstrap support for H3DG60 as seed ortholog is 100%.

Group of orthologs #137. Best score 149 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:149 T.nigroviridis:149

Q5JCX3              	100.00%		H3CB09              	100.00%
Bootstrap support for Q5JCX3 as seed ortholog is 100%.
Bootstrap support for H3CB09 as seed ortholog is 100%.

Group of orthologs #138. Best score 149 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:149 T.nigroviridis:90

Q5JFK1              	100.00%		H3CNC1              	100.00%
Bootstrap support for Q5JFK1 as seed ortholog is 100%.
Bootstrap support for H3CNC1 as seed ortholog is 98%.

Group of orthologs #139. Best score 149 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:149 T.nigroviridis:82

Q5JI54              	100.00%		H3DD91              	100.00%
Bootstrap support for Q5JI54 as seed ortholog is 100%.
Bootstrap support for H3DD91 as seed ortholog is 99%.

Group of orthologs #140. Best score 146 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:13 T.nigroviridis:146

Q5JIG1              	100.00%		H3CWT8              	100.00%
Q5JIN8              	6.77%		
Bootstrap support for Q5JIG1 as seed ortholog is 66%.
Alternative seed ortholog is Q5JIG9 (13 bits away from this cluster)
Bootstrap support for H3CWT8 as seed ortholog is 100%.

Group of orthologs #141. Best score 146 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:146 T.nigroviridis:146

Q5JJG0              	100.00%		H3CB17              	100.00%
Bootstrap support for Q5JJG0 as seed ortholog is 100%.
Bootstrap support for H3CB17 as seed ortholog is 100%.

Group of orthologs #142. Best score 145 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:145 T.nigroviridis:76

Q5JGR7              	100.00%		H3CBV8              	100.00%
                    	       		H3D1Z0              	40.85%
                    	       		H3DNN7              	18.29%
Bootstrap support for Q5JGR7 as seed ortholog is 100%.
Bootstrap support for H3CBV8 as seed ortholog is 99%.

Group of orthologs #143. Best score 145 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:145 T.nigroviridis:145

Q5JDV1              	100.00%		H3CGI8              	100.00%
Bootstrap support for Q5JDV1 as seed ortholog is 100%.
Bootstrap support for H3CGI8 as seed ortholog is 100%.

Group of orthologs #144. Best score 145 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:145 T.nigroviridis:4

Q5JIH2              	100.00%		H3CGK4              	100.00%
Bootstrap support for Q5JIH2 as seed ortholog is 100%.
Bootstrap support for H3CGK4 as seed ortholog is 70%.
Alternative seed ortholog is H3CZJ3 (4 bits away from this cluster)

Group of orthologs #145. Best score 144 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:144 T.nigroviridis:64

Q5JJ45              	100.00%		H3D5U3              	100.00%
                    	       		H3DH18              	25.16%
Bootstrap support for Q5JJ45 as seed ortholog is 100%.
Bootstrap support for H3D5U3 as seed ortholog is 96%.

Group of orthologs #146. Best score 143 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:143 T.nigroviridis:103

Q5JF63              	100.00%		H3CV18              	100.00%
Bootstrap support for Q5JF63 as seed ortholog is 100%.
Bootstrap support for H3CV18 as seed ortholog is 99%.

Group of orthologs #147. Best score 143 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:143 T.nigroviridis:143

Q5JDH3              	100.00%		H3D0G4              	100.00%
Bootstrap support for Q5JDH3 as seed ortholog is 100%.
Bootstrap support for H3D0G4 as seed ortholog is 100%.

Group of orthologs #148. Best score 143 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:143 T.nigroviridis:50

Q5JFM9              	100.00%		H3DFZ4              	100.00%
Bootstrap support for Q5JFM9 as seed ortholog is 100%.
Bootstrap support for H3DFZ4 as seed ortholog is 92%.

Group of orthologs #149. Best score 143 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:143 T.nigroviridis:143

Q5JIB9              	100.00%		Q4RG23              	100.00%
Bootstrap support for Q5JIB9 as seed ortholog is 100%.
Bootstrap support for Q4RG23 as seed ortholog is 100%.

Group of orthologs #150. Best score 139 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:139 T.nigroviridis:65

Q5JFG2              	100.00%		H3CDP4              	100.00%
Q5JFG7              	54.93%		
Bootstrap support for Q5JFG2 as seed ortholog is 100%.
Bootstrap support for H3CDP4 as seed ortholog is 85%.

Group of orthologs #151. Best score 139 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:139 T.nigroviridis:139

Q5JGJ4              	100.00%		Q4T9W7              	100.00%
Bootstrap support for Q5JGJ4 as seed ortholog is 100%.
Bootstrap support for Q4T9W7 as seed ortholog is 100%.

Group of orthologs #152. Best score 138 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:138 T.nigroviridis:138

Q5JGC8              	100.00%		H3DEV3              	100.00%
                    	       		H3D2Z9              	68.97%
                    	       		H3CRK0              	40.01%
Bootstrap support for Q5JGC8 as seed ortholog is 100%.
Bootstrap support for H3DEV3 as seed ortholog is 100%.

Group of orthologs #153. Best score 137 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:137 T.nigroviridis:66

Q5JH36              	100.00%		H3D0A0              	100.00%
Bootstrap support for Q5JH36 as seed ortholog is 100%.
Bootstrap support for H3D0A0 as seed ortholog is 99%.

Group of orthologs #154. Best score 137 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:137 T.nigroviridis:6

Q5JH68              	100.00%		H3D185              	100.00%
Bootstrap support for Q5JH68 as seed ortholog is 100%.
Bootstrap support for H3D185 as seed ortholog is 60%.
Alternative seed ortholog is H3DL75 (6 bits away from this cluster)

Group of orthologs #155. Best score 137 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:137 T.nigroviridis:57

Q5JEX2              	100.00%		H3DHL2              	100.00%
Bootstrap support for Q5JEX2 as seed ortholog is 100%.
Bootstrap support for H3DHL2 as seed ortholog is 99%.

Group of orthologs #156. Best score 136 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:136 T.nigroviridis:136

Q5JGB4              	100.00%		H3CZ89              	100.00%
Bootstrap support for Q5JGB4 as seed ortholog is 100%.
Bootstrap support for H3CZ89 as seed ortholog is 100%.

Group of orthologs #157. Best score 135 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:135 T.nigroviridis:135

Q5JHP2              	100.00%		Q4SG11              	100.00%
Bootstrap support for Q5JHP2 as seed ortholog is 100%.
Bootstrap support for Q4SG11 as seed ortholog is 100%.

Group of orthologs #158. Best score 133 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:133 T.nigroviridis:133

Q5JHF7              	100.00%		H3DH79              	100.00%
Q5JE68              	35.16%		H3CTA3              	17.73%
Bootstrap support for Q5JHF7 as seed ortholog is 100%.
Bootstrap support for H3DH79 as seed ortholog is 100%.

Group of orthologs #159. Best score 133 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:133 T.nigroviridis:133

Q5JJG3              	100.00%		Q4S7R4              	100.00%
Bootstrap support for Q5JJG3 as seed ortholog is 100%.
Bootstrap support for Q4S7R4 as seed ortholog is 100%.

Group of orthologs #160. Best score 131 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:131 T.nigroviridis:131

Q5JJF1              	100.00%		H3CBA4              	100.00%
Bootstrap support for Q5JJF1 as seed ortholog is 100%.
Bootstrap support for H3CBA4 as seed ortholog is 100%.

Group of orthologs #161. Best score 130 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:130 T.nigroviridis:130

Q5JJG4              	100.00%		H3CJ80              	100.00%
Bootstrap support for Q5JJG4 as seed ortholog is 100%.
Bootstrap support for H3CJ80 as seed ortholog is 100%.

Group of orthologs #162. Best score 129 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:129 T.nigroviridis:129

Q5JJF8              	100.00%		H3D928              	100.00%
Bootstrap support for Q5JJF8 as seed ortholog is 100%.
Bootstrap support for H3D928 as seed ortholog is 100%.

Group of orthologs #163. Best score 129 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:129 T.nigroviridis:129

Q5JE70              	100.00%		H3DJP1              	100.00%
Bootstrap support for Q5JE70 as seed ortholog is 100%.
Bootstrap support for H3DJP1 as seed ortholog is 100%.

Group of orthologs #164. Best score 128 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:128 T.nigroviridis:128

Q5JF27              	100.00%		H3CKV5              	100.00%
Q5JFZ0              	10.30%		
Bootstrap support for Q5JF27 as seed ortholog is 100%.
Bootstrap support for H3CKV5 as seed ortholog is 100%.

Group of orthologs #165. Best score 128 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:34 T.nigroviridis:38

Q5JHE3              	100.00%		H3D8K6              	100.00%
                    	       		H3C2M5              	80.68%
Bootstrap support for Q5JHE3 as seed ortholog is 87%.
Bootstrap support for H3D8K6 as seed ortholog is 90%.

Group of orthologs #166. Best score 127 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:127 T.nigroviridis:127

Q5JDK2              	100.00%		H3BX90              	100.00%
                    	       		H3DEK5              	51.91%
                    	       		H3CP37              	39.49%
                    	       		H3C3B2              	37.83%
                    	       		H3CKV9              	37.24%
                    	       		H3DBG0              	36.95%
                    	       		H3DEM3              	35.78%
                    	       		H3CGR3              	35.68%
                    	       		H3D502              	35.39%
                    	       		H3DB52              	34.80%
                    	       		H3DKK7              	34.02%
                    	       		H3C4F5              	33.63%
                    	       		H3CH97              	33.63%
                    	       		H3D0D1              	32.84%
                    	       		H3D9T8              	32.06%
                    	       		H3DB66              	32.06%
                    	       		H3DB51              	31.77%
                    	       		H3C2N5              	31.48%
                    	       		H3CPB3              	31.28%
                    	       		H3DAM3              	31.18%
                    	       		H3CRA5              	30.30%
                    	       		H3DAX5              	26.49%
                    	       		H3C9J7              	25.61%
                    	       		H3DNN5              	24.14%
                    	       		H3D2K3              	24.05%
                    	       		H3DB67              	23.26%
                    	       		H3D885              	22.87%
                    	       		H3D284              	22.68%
                    	       		H3CF08              	21.99%
                    	       		H3CV15              	21.70%
                    	       		H3D9W6              	20.72%
                    	       		H3D5M5              	20.43%
                    	       		H3CAR5              	18.48%
Bootstrap support for Q5JDK2 as seed ortholog is 100%.
Bootstrap support for H3BX90 as seed ortholog is 100%.

Group of orthologs #167. Best score 127 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:127 T.nigroviridis:71

Q5JIE9              	100.00%		H3D399              	100.00%
Bootstrap support for Q5JIE9 as seed ortholog is 100%.
Bootstrap support for H3D399 as seed ortholog is 97%.

Group of orthologs #168. Best score 127 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:127 T.nigroviridis:127

Q5JDI4              	100.00%		H3DCS6              	100.00%
Bootstrap support for Q5JDI4 as seed ortholog is 100%.
Bootstrap support for H3DCS6 as seed ortholog is 100%.

Group of orthologs #169. Best score 126 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:126 T.nigroviridis:126

Q5JJ59              	100.00%		H3CPU3              	100.00%
Q5JID9              	5.93%		
Bootstrap support for Q5JJ59 as seed ortholog is 100%.
Bootstrap support for H3CPU3 as seed ortholog is 100%.

Group of orthologs #170. Best score 126 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:126 T.nigroviridis:126

Q5JF75              	100.00%		H3CES6              	100.00%
Bootstrap support for Q5JF75 as seed ortholog is 100%.
Bootstrap support for H3CES6 as seed ortholog is 100%.

Group of orthologs #171. Best score 126 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:9 T.nigroviridis:126

Q5JGG0              	100.00%		H3CXW7              	100.00%
Bootstrap support for Q5JGG0 as seed ortholog is 64%.
Alternative seed ortholog is Q5JHU7 (9 bits away from this cluster)
Bootstrap support for H3CXW7 as seed ortholog is 100%.

Group of orthologs #172. Best score 125 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:125 T.nigroviridis:125

Q5JG15              	100.00%		H3BWN6              	100.00%
Bootstrap support for Q5JG15 as seed ortholog is 100%.
Bootstrap support for H3BWN6 as seed ortholog is 100%.

Group of orthologs #173. Best score 125 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:125 T.nigroviridis:125

Q5JIP8              	100.00%		H3CH45              	100.00%
Bootstrap support for Q5JIP8 as seed ortholog is 100%.
Bootstrap support for H3CH45 as seed ortholog is 100%.

Group of orthologs #174. Best score 125 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:31 T.nigroviridis:50

Q5JFS0              	100.00%		H3D4F6              	100.00%
Bootstrap support for Q5JFS0 as seed ortholog is 78%.
Bootstrap support for H3D4F6 as seed ortholog is 90%.

Group of orthologs #175. Best score 124 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 T.nigroviridis:15

Q5JF30              	100.00%		H3CR00              	100.00%
Bootstrap support for Q5JF30 as seed ortholog is 99%.
Bootstrap support for H3CR00 as seed ortholog is 70%.
Alternative seed ortholog is Q4S7T1 (15 bits away from this cluster)

Group of orthologs #176. Best score 124 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:124 T.nigroviridis:40

Q5JCY9              	100.00%		H3CV39              	100.00%
Bootstrap support for Q5JCY9 as seed ortholog is 100%.
Bootstrap support for H3CV39 as seed ortholog is 84%.

Group of orthologs #177. Best score 124 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:124 T.nigroviridis:124

Q5JDP5              	100.00%		H3D390              	100.00%
Bootstrap support for Q5JDP5 as seed ortholog is 100%.
Bootstrap support for H3D390 as seed ortholog is 100%.

Group of orthologs #178. Best score 124 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:124 T.nigroviridis:124

Q5JDV9              	100.00%		H3D7Y2              	100.00%
Bootstrap support for Q5JDV9 as seed ortholog is 100%.
Bootstrap support for H3D7Y2 as seed ortholog is 100%.

Group of orthologs #179. Best score 123 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 T.nigroviridis:17

Q5JIX4              	100.00%		H3DDS7              	100.00%
Bootstrap support for Q5JIX4 as seed ortholog is 96%.
Bootstrap support for H3DDS7 as seed ortholog is 69%.
Alternative seed ortholog is Q4RIV5 (17 bits away from this cluster)

Group of orthologs #180. Best score 122 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:122 T.nigroviridis:55

Q5JJ91              	100.00%		H3CC73              	100.00%
Bootstrap support for Q5JJ91 as seed ortholog is 100%.
Bootstrap support for H3CC73 as seed ortholog is 88%.

Group of orthologs #181. Best score 122 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:122 T.nigroviridis:122

Q5JJC6              	100.00%		H3DEN0              	100.00%
Bootstrap support for Q5JJC6 as seed ortholog is 100%.
Bootstrap support for H3DEN0 as seed ortholog is 100%.

Group of orthologs #182. Best score 121 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:121 T.nigroviridis:121

Q5JDB6              	100.00%		H3DMC6              	100.00%
                    	       		H3DEW1              	6.92%
Bootstrap support for Q5JDB6 as seed ortholog is 100%.
Bootstrap support for H3DMC6 as seed ortholog is 100%.

Group of orthologs #183. Best score 121 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:60 T.nigroviridis:25

Q5JEU9              	100.00%		H3CZ90              	100.00%
Bootstrap support for Q5JEU9 as seed ortholog is 96%.
Bootstrap support for H3CZ90 as seed ortholog is 75%.

Group of orthologs #184. Best score 120 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:120 T.nigroviridis:120

Q52366              	100.00%		H3C315              	100.00%
                    	       		Q4TBU5              	49.59%
Bootstrap support for Q52366 as seed ortholog is 100%.
Bootstrap support for H3C315 as seed ortholog is 100%.

Group of orthologs #185. Best score 119 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:119 T.nigroviridis:119

Q5JGT2              	100.00%		H3D8S5              	100.00%
Q5JI45              	39.12%		
Bootstrap support for Q5JGT2 as seed ortholog is 100%.
Bootstrap support for H3D8S5 as seed ortholog is 100%.

Group of orthologs #186. Best score 119 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:119 T.nigroviridis:119

Q5JFL7              	100.00%		H3CZV5              	100.00%
Bootstrap support for Q5JFL7 as seed ortholog is 100%.
Bootstrap support for H3CZV5 as seed ortholog is 100%.

Group of orthologs #187. Best score 119 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:119 T.nigroviridis:119

Q5JEM6              	100.00%		H3DDP9              	100.00%
Bootstrap support for Q5JEM6 as seed ortholog is 100%.
Bootstrap support for H3DDP9 as seed ortholog is 100%.

Group of orthologs #188. Best score 118 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:118 T.nigroviridis:23

Q5JFD8              	100.00%		H3C6F1              	100.00%
                    	       		H3CUQ3              	53.40%
                    	       		H3DKW5              	48.38%
                    	       		H3DAJ5              	38.35%
Bootstrap support for Q5JFD8 as seed ortholog is 100%.
Bootstrap support for H3C6F1 as seed ortholog is 62%.
Alternative seed ortholog is H3BYH7 (23 bits away from this cluster)

Group of orthologs #189. Best score 118 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:118 T.nigroviridis:118

Q5JDS2              	100.00%		H3DQ98              	100.00%
                    	       		Q4RSZ3              	50.63%
                    	       		H3CUN1              	48.75%
                    	       		H3D9P0              	44.92%
Bootstrap support for Q5JDS2 as seed ortholog is 100%.
Bootstrap support for H3DQ98 as seed ortholog is 100%.

Group of orthologs #190. Best score 118 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:118 T.nigroviridis:118

Q5JIA2              	100.00%		H3DLD1              	100.00%
Bootstrap support for Q5JIA2 as seed ortholog is 100%.
Bootstrap support for H3DLD1 as seed ortholog is 100%.

Group of orthologs #191. Best score 117 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:117 T.nigroviridis:117

Q5JD70              	100.00%		H3BX02              	100.00%
Q5JHN7              	6.68%		
Bootstrap support for Q5JD70 as seed ortholog is 100%.
Bootstrap support for H3BX02 as seed ortholog is 100%.

Group of orthologs #192. Best score 117 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:117 T.nigroviridis:117

Q5JIQ1              	100.00%		H3DBL1              	100.00%
Bootstrap support for Q5JIQ1 as seed ortholog is 100%.
Bootstrap support for H3DBL1 as seed ortholog is 100%.

Group of orthologs #193. Best score 116 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:116 T.nigroviridis:116

Q5JI34              	100.00%		H3C2W0              	100.00%
                    	       		H3CY22              	65.54%
                    	       		H3CJS5              	59.25%
                    	       		H3BYC3              	8.59%
                    	       		H3C5F2              	8.52%
                    	       		H3D9X1              	7.86%
                    	       		H3C1J1              	7.38%
Bootstrap support for Q5JI34 as seed ortholog is 100%.
Bootstrap support for H3C2W0 as seed ortholog is 100%.

Group of orthologs #194. Best score 115 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:115 T.nigroviridis:43

Q76CZ2              	100.00%		H3D801              	100.00%
Bootstrap support for Q76CZ2 as seed ortholog is 100%.
Bootstrap support for H3D801 as seed ortholog is 88%.

Group of orthologs #195. Best score 115 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:115 T.nigroviridis:115

Q5JDA8              	100.00%		H3DIN1              	100.00%
Bootstrap support for Q5JDA8 as seed ortholog is 100%.
Bootstrap support for H3DIN1 as seed ortholog is 100%.

Group of orthologs #196. Best score 114 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:114 T.nigroviridis:114

O52958              	100.00%		H3CSB0              	100.00%
                    	       		H3D931              	30.54%
                    	       		H3D212              	24.32%
Bootstrap support for O52958 as seed ortholog is 100%.
Bootstrap support for H3CSB0 as seed ortholog is 100%.

Group of orthologs #197. Best score 114 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:114 T.nigroviridis:114

Q5JE04              	100.00%		H3C4B5              	100.00%
Bootstrap support for Q5JE04 as seed ortholog is 100%.
Bootstrap support for H3C4B5 as seed ortholog is 100%.

Group of orthologs #198. Best score 114 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:114 T.nigroviridis:114

Q5JDI6              	100.00%		H3CC96              	100.00%
Bootstrap support for Q5JDI6 as seed ortholog is 100%.
Bootstrap support for H3CC96 as seed ortholog is 100%.

Group of orthologs #199. Best score 114 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:114 T.nigroviridis:52

Q5JDZ9              	100.00%		H3D7L8              	100.00%
Bootstrap support for Q5JDZ9 as seed ortholog is 100%.
Bootstrap support for H3D7L8 as seed ortholog is 96%.

Group of orthologs #200. Best score 113 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:113 T.nigroviridis:113

Q5JIJ0              	100.00%		H3CE72              	100.00%
                    	       		H3CNW5              	8.65%
Bootstrap support for Q5JIJ0 as seed ortholog is 100%.
Bootstrap support for H3CE72 as seed ortholog is 100%.

Group of orthologs #201. Best score 113 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:113 T.nigroviridis:113

Q5JEZ6              	100.00%		H3CDT1              	100.00%
Bootstrap support for Q5JEZ6 as seed ortholog is 100%.
Bootstrap support for H3CDT1 as seed ortholog is 100%.

Group of orthologs #202. Best score 113 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:113 T.nigroviridis:113

Q5JDI9              	100.00%		H3CPY0              	100.00%
Bootstrap support for Q5JDI9 as seed ortholog is 100%.
Bootstrap support for H3CPY0 as seed ortholog is 100%.

Group of orthologs #203. Best score 113 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:113 T.nigroviridis:113

Q5JE74              	100.00%		H3D989              	100.00%
Bootstrap support for Q5JE74 as seed ortholog is 100%.
Bootstrap support for H3D989 as seed ortholog is 100%.

Group of orthologs #204. Best score 112 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:112 T.nigroviridis:112

Q5JGC7              	100.00%		H3CEM1              	100.00%
                    	       		H3CN33              	64.08%
                    	       		H3C4J8              	51.60%
Bootstrap support for Q5JGC7 as seed ortholog is 100%.
Bootstrap support for H3CEM1 as seed ortholog is 100%.

Group of orthologs #205. Best score 112 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:112 T.nigroviridis:112

Q5JFJ9              	100.00%		H3CFB0              	100.00%
                    	       		Q4SIB6              	31.36%
Bootstrap support for Q5JFJ9 as seed ortholog is 100%.
Bootstrap support for H3CFB0 as seed ortholog is 100%.

Group of orthologs #206. Best score 112 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:66 T.nigroviridis:112

Q5JFV4              	100.00%		H3DFW3              	100.00%
Bootstrap support for Q5JFV4 as seed ortholog is 98%.
Bootstrap support for H3DFW3 as seed ortholog is 100%.

Group of orthologs #207. Best score 112 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:112 T.nigroviridis:50

Q5JGJ2              	100.00%		Q4JQH7              	100.00%
Bootstrap support for Q5JGJ2 as seed ortholog is 100%.
Bootstrap support for Q4JQH7 as seed ortholog is 94%.

Group of orthologs #208. Best score 111 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:111 T.nigroviridis:20

Q5JDJ9              	100.00%		H3CR86              	100.00%
                    	       		H3DLF2              	40.59%
                    	       		H3CNG3              	22.00%
Bootstrap support for Q5JDJ9 as seed ortholog is 100%.
Bootstrap support for H3CR86 as seed ortholog is 76%.

Group of orthologs #209. Best score 111 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:111 T.nigroviridis:111

Q5JJF9              	100.00%		H3DI59              	100.00%
Bootstrap support for Q5JJF9 as seed ortholog is 100%.
Bootstrap support for H3DI59 as seed ortholog is 100%.

Group of orthologs #210. Best score 110 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:110 T.nigroviridis:26

Q5JIB6              	100.00%		H3CHN3              	100.00%
Q5JH42              	21.12%		
Bootstrap support for Q5JIB6 as seed ortholog is 100%.
Bootstrap support for H3CHN3 as seed ortholog is 76%.

Group of orthologs #211. Best score 110 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:110 T.nigroviridis:110

Q5JDB8              	100.00%		H3C6E4              	100.00%
Bootstrap support for Q5JDB8 as seed ortholog is 100%.
Bootstrap support for H3C6E4 as seed ortholog is 100%.

Group of orthologs #212. Best score 109 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:109 T.nigroviridis:109

Q5JFW5              	100.00%		H3D969              	100.00%
                    	       		H3CWM1              	80.08%
                    	       		H3CS27              	21.40%
Bootstrap support for Q5JFW5 as seed ortholog is 100%.
Bootstrap support for H3D969 as seed ortholog is 100%.

Group of orthologs #213. Best score 109 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:109 T.nigroviridis:109

O74035              	100.00%		H3CG04              	100.00%
Bootstrap support for O74035 as seed ortholog is 100%.
Bootstrap support for H3CG04 as seed ortholog is 100%.

Group of orthologs #214. Best score 108 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:108 T.nigroviridis:108

Q5JER5              	100.00%		H3D8T3              	100.00%
Bootstrap support for Q5JER5 as seed ortholog is 100%.
Bootstrap support for H3D8T3 as seed ortholog is 100%.

Group of orthologs #215. Best score 107 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:107 T.nigroviridis:107

Q5JI74              	100.00%		H3CCJ2              	100.00%
Bootstrap support for Q5JI74 as seed ortholog is 100%.
Bootstrap support for H3CCJ2 as seed ortholog is 100%.

Group of orthologs #216. Best score 107 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:107 T.nigroviridis:107

Q5JDR5              	100.00%		H3CJP3              	100.00%
Bootstrap support for Q5JDR5 as seed ortholog is 100%.
Bootstrap support for H3CJP3 as seed ortholog is 100%.

Group of orthologs #217. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 T.nigroviridis:38

Q5JI09              	100.00%		H3DD71              	100.00%
                    	       		H3CZP2              	49.91%
                    	       		H3DME1              	32.98%
                    	       		H3BWX8              	26.63%
                    	       		H3CTV0              	25.57%
                    	       		H3DME2              	23.63%
                    	       		H3D8J7              	17.64%
                    	       		H3CBC9              	16.58%
Bootstrap support for Q5JI09 as seed ortholog is 100%.
Bootstrap support for H3DD71 as seed ortholog is 84%.

Group of orthologs #218. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 T.nigroviridis:106

Q5JEW5              	100.00%		H3D004              	100.00%
                    	       		H3D1D1              	52.76%
Bootstrap support for Q5JEW5 as seed ortholog is 100%.
Bootstrap support for H3D004 as seed ortholog is 100%.

Group of orthologs #219. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 T.nigroviridis:106

Q5JH82              	100.00%		H3D4Z8              	100.00%
Bootstrap support for Q5JH82 as seed ortholog is 100%.
Bootstrap support for H3D4Z8 as seed ortholog is 100%.

Group of orthologs #220. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 T.nigroviridis:106

Q5JIR1              	100.00%		H3D3V2              	100.00%
Bootstrap support for Q5JIR1 as seed ortholog is 100%.
Bootstrap support for H3D3V2 as seed ortholog is 100%.

Group of orthologs #221. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 T.nigroviridis:106

Q5JET7              	100.00%		H3DFJ5              	100.00%
Bootstrap support for Q5JET7 as seed ortholog is 100%.
Bootstrap support for H3DFJ5 as seed ortholog is 100%.

Group of orthologs #222. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 T.nigroviridis:106

Q5JFN5              	100.00%		H3DJU8              	100.00%
Bootstrap support for Q5JFN5 as seed ortholog is 100%.
Bootstrap support for H3DJU8 as seed ortholog is 100%.

Group of orthologs #223. Best score 105 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:105 T.nigroviridis:105

Q5JET2              	100.00%		H3CLC8              	100.00%
Bootstrap support for Q5JET2 as seed ortholog is 100%.
Bootstrap support for H3CLC8 as seed ortholog is 100%.

Group of orthologs #224. Best score 104 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:104 T.nigroviridis:104

Q5JHU9              	100.00%		Q4JQH8              	100.00%
Q5JGJ3              	10.02%		
Q5JDL7              	8.56%		
Bootstrap support for Q5JHU9 as seed ortholog is 100%.
Bootstrap support for Q4JQH8 as seed ortholog is 100%.

Group of orthologs #225. Best score 104 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:104 T.nigroviridis:104

Q5JIQ8              	100.00%		H3D5P5              	100.00%
Bootstrap support for Q5JIQ8 as seed ortholog is 100%.
Bootstrap support for H3D5P5 as seed ortholog is 100%.

Group of orthologs #226. Best score 104 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:104 T.nigroviridis:104

Q5JEI4              	100.00%		H3DHI5              	100.00%
Bootstrap support for Q5JEI4 as seed ortholog is 100%.
Bootstrap support for H3DHI5 as seed ortholog is 100%.

Group of orthologs #227. Best score 102 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:102 T.nigroviridis:33

Q5JI15              	100.00%		H3DIA1              	100.00%
Q5JEW7              	10.75%		
Bootstrap support for Q5JI15 as seed ortholog is 100%.
Bootstrap support for H3DIA1 as seed ortholog is 89%.

Group of orthologs #228. Best score 102 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:102 T.nigroviridis:102

Q5JH35              	100.00%		H3C3Z9              	100.00%
Bootstrap support for Q5JH35 as seed ortholog is 100%.
Bootstrap support for H3C3Z9 as seed ortholog is 100%.

Group of orthologs #229. Best score 102 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:102 T.nigroviridis:102

Q5JEX8              	100.00%		H3CAD4              	100.00%
Bootstrap support for Q5JEX8 as seed ortholog is 100%.
Bootstrap support for H3CAD4 as seed ortholog is 100%.

Group of orthologs #230. Best score 102 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:102 T.nigroviridis:102

Q5JEB7              	100.00%		H3D035              	100.00%
Bootstrap support for Q5JEB7 as seed ortholog is 100%.
Bootstrap support for H3D035 as seed ortholog is 100%.

Group of orthologs #231. Best score 102 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:102 T.nigroviridis:102

Q5JJE2              	100.00%		H3D535              	100.00%
Bootstrap support for Q5JJE2 as seed ortholog is 100%.
Bootstrap support for H3D535 as seed ortholog is 100%.

Group of orthologs #232. Best score 101 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:101 T.nigroviridis:101

Q5JGT4              	100.00%		H3CAX9              	100.00%
Bootstrap support for Q5JGT4 as seed ortholog is 100%.
Bootstrap support for H3CAX9 as seed ortholog is 100%.

Group of orthologs #233. Best score 101 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:101 T.nigroviridis:101

Q5JJG7              	100.00%		H3CND4              	100.00%
Bootstrap support for Q5JJG7 as seed ortholog is 100%.
Bootstrap support for H3CND4 as seed ortholog is 100%.

Group of orthologs #234. Best score 101 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:101 T.nigroviridis:101

Q5JJF4              	100.00%		Q4SK90              	100.00%
Bootstrap support for Q5JJF4 as seed ortholog is 100%.
Bootstrap support for Q4SK90 as seed ortholog is 100%.

Group of orthologs #235. Best score 100 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:100 T.nigroviridis:100

Q5JGI1              	100.00%		H3CJ82              	100.00%
Bootstrap support for Q5JGI1 as seed ortholog is 100%.
Bootstrap support for H3CJ82 as seed ortholog is 100%.

Group of orthologs #236. Best score 98 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:98 T.nigroviridis:98

Q5JDH4              	100.00%		Q4SJL7              	100.00%
Bootstrap support for Q5JDH4 as seed ortholog is 100%.
Bootstrap support for Q4SJL7 as seed ortholog is 100%.

Group of orthologs #237. Best score 97 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:97 T.nigroviridis:97

Q5JFV6              	100.00%		H3D5X8              	100.00%
                    	       		H3CI89              	7.52%
Bootstrap support for Q5JFV6 as seed ortholog is 100%.
Bootstrap support for H3D5X8 as seed ortholog is 100%.

Group of orthologs #238. Best score 97 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:97 T.nigroviridis:1

Q5JGK8              	100.00%		H3CMD4              	100.00%
Bootstrap support for Q5JGK8 as seed ortholog is 100%.
Bootstrap support for H3CMD4 as seed ortholog is 47%.
Alternative seed ortholog is H3CHS3 (1 bits away from this cluster)

Group of orthologs #239. Best score 96 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:96 T.nigroviridis:96

Q5JGQ5              	8.58%		H3DFK3              	100.00%
Q5JIE2              	100.00%		H3DFK6              	100.00%
Q5JGQ4              	7.46%		H3DFK5              	89.17%
                    	       		H3C2J9              	84.56%
                    	       		H3DFL1              	77.42%
                    	       		H3DFK7              	76.27%
                    	       		H3C2P8              	58.29%
                    	       		H3DFK9              	50.92%
                    	       		H3DFK8              	50.40%
                    	       		H3CJD9              	47.93%
                    	       		H3CG75              	47.21%
                    	       		H3DFF6              	35.60%
                    	       		H3DFK4              	31.45%
                    	       		H3DFL2              	30.30%
                    	       		H3CJD8              	27.65%
Bootstrap support for Q5JIE2 as seed ortholog is 100%.
Bootstrap support for H3DFK3 as seed ortholog is 100%.
Bootstrap support for H3DFK6 as seed ortholog is 100%.

Group of orthologs #240. Best score 96 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:96 T.nigroviridis:7

Q5JIL6              	100.00%		H3CVL7              	100.00%
                    	       		H3CG74              	37.49%
                    	       		H3CWW8              	36.10%
                    	       		H3D7A0              	33.70%
                    	       		H3CU00              	33.70%
                    	       		H3CW83              	33.33%
                    	       		H3DMA6              	33.06%
                    	       		H3D797              	31.67%
                    	       		H3D7A1              	29.82%
                    	       		H3D798              	25.67%
                    	       		H3D799              	19.30%
Bootstrap support for Q5JIL6 as seed ortholog is 100%.
Bootstrap support for H3CVL7 as seed ortholog is 61%.
Alternative seed ortholog is H3CAJ4 (7 bits away from this cluster)

Group of orthologs #241. Best score 96 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:96 T.nigroviridis:96

Q5JH18              	100.00%		Q4SFP9              	100.00%
                    	       		H3D766              	78.16%
                    	       		H3DPT3              	77.91%
Bootstrap support for Q5JH18 as seed ortholog is 100%.
Bootstrap support for Q4SFP9 as seed ortholog is 100%.

Group of orthologs #242. Best score 96 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:96 T.nigroviridis:96

Q5JF32              	100.00%		H3DD39              	100.00%
Q5JFD3              	45.05%		
Bootstrap support for Q5JF32 as seed ortholog is 100%.
Bootstrap support for H3DD39 as seed ortholog is 100%.

Group of orthologs #243. Best score 96 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:96 T.nigroviridis:96

Q5JG02              	100.00%		H3C428              	100.00%
Bootstrap support for Q5JG02 as seed ortholog is 100%.
Bootstrap support for H3C428 as seed ortholog is 100%.

Group of orthologs #244. Best score 95 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:40 T.nigroviridis:45

Q5JHY2              	100.00%		H3DKS8              	100.00%
Q5JGP4              	100.00%		H3DFC3              	100.00%
                    	       		H3DEP3              	40.98%
Bootstrap support for Q5JHY2 as seed ortholog is 84%.
Bootstrap support for Q5JGP4 as seed ortholog is 75%.
Bootstrap support for H3DKS8 as seed ortholog is 89%.
Bootstrap support for H3DFC3 as seed ortholog is 78%.

Group of orthologs #245. Best score 95 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:95 T.nigroviridis:31

Q5JHS6              	100.00%		H3CLY6              	100.00%
                    	       		H3CT24              	42.91%
Bootstrap support for Q5JHS6 as seed ortholog is 100%.
Bootstrap support for H3CLY6 as seed ortholog is 78%.

Group of orthologs #246. Best score 95 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:95 T.nigroviridis:95

Q5JHR7              	100.00%		H3CJN9              	100.00%
Bootstrap support for Q5JHR7 as seed ortholog is 100%.
Bootstrap support for H3CJN9 as seed ortholog is 100%.

Group of orthologs #247. Best score 95 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:95 T.nigroviridis:14

Q5JHL8              	100.00%		H3DJY7              	100.00%
Bootstrap support for Q5JHL8 as seed ortholog is 100%.
Bootstrap support for H3DJY7 as seed ortholog is 70%.
Alternative seed ortholog is H3D9G3 (14 bits away from this cluster)

Group of orthologs #248. Best score 95 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:95 T.nigroviridis:95

Q5JIV0              	100.00%		Q4RFU2              	100.00%
Bootstrap support for Q5JIV0 as seed ortholog is 100%.
Bootstrap support for Q4RFU2 as seed ortholog is 100%.

Group of orthologs #249. Best score 94 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:94 T.nigroviridis:94

Q5JI20              	100.00%		H3DHA8              	100.00%
                    	       		H3CXG9              	47.00%
                    	       		H3D9H7              	44.44%
                    	       		H3DQV8              	43.44%
                    	       		H3CVW4              	28.89%
                    	       		H3CSM5              	28.44%
                    	       		H3DPW3              	23.56%
                    	       		H3C5T5              	7.67%
Bootstrap support for Q5JI20 as seed ortholog is 100%.
Bootstrap support for H3DHA8 as seed ortholog is 100%.

Group of orthologs #250. Best score 94 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:94 T.nigroviridis:94

Q5JH39              	100.00%		H3CPI9              	100.00%
                    	       		H3CPJ9              	53.08%
                    	       		H3CAI0              	48.23%
Bootstrap support for Q5JH39 as seed ortholog is 100%.
Bootstrap support for H3CPI9 as seed ortholog is 100%.

Group of orthologs #251. Best score 94 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:94 T.nigroviridis:94

Q5JEE1              	100.00%		H3DIX2              	100.00%
                    	       		H3DP75              	60.27%
Bootstrap support for Q5JEE1 as seed ortholog is 100%.
Bootstrap support for H3DIX2 as seed ortholog is 100%.

Group of orthologs #252. Best score 94 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:94 T.nigroviridis:27

Q5JIA1              	100.00%		H3CA52              	100.00%
Bootstrap support for Q5JIA1 as seed ortholog is 100%.
Bootstrap support for H3CA52 as seed ortholog is 81%.

Group of orthologs #253. Best score 93 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:93 T.nigroviridis:93

Q5JIZ7              	100.00%		H3D8S9              	100.00%
                    	       		H3CSA6              	61.02%
Bootstrap support for Q5JIZ7 as seed ortholog is 100%.
Bootstrap support for H3D8S9 as seed ortholog is 100%.

Group of orthologs #254. Best score 92 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:92 T.nigroviridis:92

O08467              	100.00%		H3CC80              	100.00%
Bootstrap support for O08467 as seed ortholog is 100%.
Bootstrap support for H3CC80 as seed ortholog is 100%.

Group of orthologs #255. Best score 92 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:92 T.nigroviridis:92

Q5JGT7              	100.00%		H3D962              	100.00%
Bootstrap support for Q5JGT7 as seed ortholog is 100%.
Bootstrap support for H3D962 as seed ortholog is 100%.

Group of orthologs #256. Best score 92 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:92 T.nigroviridis:92

Q5JGZ7              	100.00%		Q4REF0              	100.00%
Bootstrap support for Q5JGZ7 as seed ortholog is 100%.
Bootstrap support for Q4REF0 as seed ortholog is 100%.

Group of orthologs #257. Best score 91 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:91 T.nigroviridis:91

Q5JES6              	100.00%		H3CCI3              	100.00%
Q5JFK6              	17.68%		
Bootstrap support for Q5JES6 as seed ortholog is 100%.
Bootstrap support for H3CCI3 as seed ortholog is 100%.

Group of orthologs #258. Best score 91 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:91 T.nigroviridis:91

Q5JFZ5              	100.00%		H3BYH5              	100.00%
Bootstrap support for Q5JFZ5 as seed ortholog is 100%.
Bootstrap support for H3BYH5 as seed ortholog is 100%.

Group of orthologs #259. Best score 90 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:90 T.nigroviridis:29

Q5JJB9              	100.00%		H3DH84              	100.00%
                    	       		H3CPJ1              	47.54%
Bootstrap support for Q5JJB9 as seed ortholog is 100%.
Bootstrap support for H3DH84 as seed ortholog is 56%.
Alternative seed ortholog is H3D762 (29 bits away from this cluster)

Group of orthologs #260. Best score 90 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:4 T.nigroviridis:90

Q5JJ24              	100.00%		H3C3T4              	100.00%
Bootstrap support for Q5JJ24 as seed ortholog is 56%.
Alternative seed ortholog is Q5JHS2 (4 bits away from this cluster)
Bootstrap support for H3C3T4 as seed ortholog is 100%.

Group of orthologs #261. Best score 90 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:90 T.nigroviridis:6

Q5JI92              	100.00%		H3CE76              	100.00%
Bootstrap support for Q5JI92 as seed ortholog is 100%.
Bootstrap support for H3CE76 as seed ortholog is 54%.
Alternative seed ortholog is H3CH66 (6 bits away from this cluster)

Group of orthologs #262. Best score 90 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:90 T.nigroviridis:90

Q877I0              	100.00%		H3CP47              	100.00%
Bootstrap support for Q877I0 as seed ortholog is 100%.
Bootstrap support for H3CP47 as seed ortholog is 100%.

Group of orthologs #263. Best score 90 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:90 T.nigroviridis:90

Q5JGR3              	100.00%		Q4S4J7              	100.00%
Bootstrap support for Q5JGR3 as seed ortholog is 100%.
Bootstrap support for Q4S4J7 as seed ortholog is 100%.

Group of orthologs #264. Best score 89 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:89 T.nigroviridis:32

Q5JFZ8              	100.00%		H3CFW6              	100.00%
Bootstrap support for Q5JFZ8 as seed ortholog is 100%.
Bootstrap support for H3CFW6 as seed ortholog is 82%.

Group of orthologs #265. Best score 89 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:89 T.nigroviridis:4

Q5JFI2              	100.00%		H3DEW3              	100.00%
Bootstrap support for Q5JFI2 as seed ortholog is 100%.
Bootstrap support for H3DEW3 as seed ortholog is 53%.
Alternative seed ortholog is Q4SFA0 (4 bits away from this cluster)

Group of orthologs #266. Best score 89 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:89 T.nigroviridis:89

Q5JEH9              	100.00%		H3DJS4              	100.00%
Bootstrap support for Q5JEH9 as seed ortholog is 100%.
Bootstrap support for H3DJS4 as seed ortholog is 100%.

Group of orthologs #267. Best score 88 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:88 T.nigroviridis:88

Q5JGH6              	100.00%		Q4JQI7              	100.00%
Q5JIL2              	11.59%		H3BYA1              	17.30%
Bootstrap support for Q5JGH6 as seed ortholog is 100%.
Bootstrap support for Q4JQI7 as seed ortholog is 100%.

Group of orthologs #268. Best score 88 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:88 T.nigroviridis:88

Q5JDV0              	100.00%		H3CT23              	100.00%
Bootstrap support for Q5JDV0 as seed ortholog is 100%.
Bootstrap support for H3CT23 as seed ortholog is 100%.

Group of orthologs #269. Best score 88 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:88 T.nigroviridis:88

Q5JD92              	100.00%		H3DHS4              	100.00%
Bootstrap support for Q5JD92 as seed ortholog is 100%.
Bootstrap support for H3DHS4 as seed ortholog is 100%.

Group of orthologs #270. Best score 88 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:88 T.nigroviridis:88

Q5JJG5              	100.00%		Q4RJZ1              	100.00%
Bootstrap support for Q5JJG5 as seed ortholog is 100%.
Bootstrap support for Q4RJZ1 as seed ortholog is 100%.

Group of orthologs #271. Best score 87 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:87 T.nigroviridis:87

Q5JIF4              	100.00%		H3D3C7              	100.00%
Bootstrap support for Q5JIF4 as seed ortholog is 100%.
Bootstrap support for H3D3C7 as seed ortholog is 100%.

Group of orthologs #272. Best score 87 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:87 T.nigroviridis:87

Q5JGM0              	100.00%		H3DN08              	100.00%
Bootstrap support for Q5JGM0 as seed ortholog is 100%.
Bootstrap support for H3DN08 as seed ortholog is 100%.

Group of orthologs #273. Best score 86 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 T.nigroviridis:14

Q68BJ6              	100.00%		H3DL71              	100.00%
                    	       		H3DJQ0              	60.76%
                    	       		H3CQY9              	55.72%
Bootstrap support for Q68BJ6 as seed ortholog is 100%.
Bootstrap support for H3DL71 as seed ortholog is 60%.
Alternative seed ortholog is H3CJC9 (14 bits away from this cluster)

Group of orthologs #274. Best score 86 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 T.nigroviridis:34

Q5JH34              	100.00%		H3CCQ6              	100.00%
Bootstrap support for Q5JH34 as seed ortholog is 100%.
Bootstrap support for H3CCQ6 as seed ortholog is 81%.

Group of orthologs #275. Best score 86 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 T.nigroviridis:86

Q5JE01              	100.00%		H3DEN1              	100.00%
Bootstrap support for Q5JE01 as seed ortholog is 100%.
Bootstrap support for H3DEN1 as seed ortholog is 100%.

Group of orthologs #276. Best score 86 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 T.nigroviridis:86

Q5JEX4              	100.00%		Q4TB40              	100.00%
Bootstrap support for Q5JEX4 as seed ortholog is 100%.
Bootstrap support for Q4TB40 as seed ortholog is 100%.

Group of orthologs #277. Best score 86 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 T.nigroviridis:86

Q5JGM4              	100.00%		Q4T8S6              	100.00%
Bootstrap support for Q5JGM4 as seed ortholog is 100%.
Bootstrap support for Q4T8S6 as seed ortholog is 100%.

Group of orthologs #278. Best score 85 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:85 T.nigroviridis:85

Q5JF42              	100.00%		H3D7D3              	100.00%
Bootstrap support for Q5JF42 as seed ortholog is 100%.
Bootstrap support for H3D7D3 as seed ortholog is 100%.

Group of orthologs #279. Best score 84 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:84 T.nigroviridis:84

Q5JCY8              	100.00%		H3DJC0              	100.00%
Bootstrap support for Q5JCY8 as seed ortholog is 100%.
Bootstrap support for H3DJC0 as seed ortholog is 100%.

Group of orthologs #280. Best score 83 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:83 T.nigroviridis:83

Q5JDH9              	100.00%		H3D293              	100.00%
Bootstrap support for Q5JDH9 as seed ortholog is 100%.
Bootstrap support for H3D293 as seed ortholog is 100%.

Group of orthologs #281. Best score 83 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:83 T.nigroviridis:83

Q5JH93              	100.00%		Q4S1I6              	100.00%
Bootstrap support for Q5JH93 as seed ortholog is 100%.
Bootstrap support for Q4S1I6 as seed ortholog is 100%.

Group of orthologs #282. Best score 82 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:82 T.nigroviridis:82

Q5JI44              	100.00%		H3CRI5              	100.00%
Bootstrap support for Q5JI44 as seed ortholog is 100%.
Bootstrap support for H3CRI5 as seed ortholog is 100%.

Group of orthologs #283. Best score 81 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:39 T.nigroviridis:11

Q5JJE5              	100.00%		H3CT20              	100.00%
                    	       		H3DFN3              	72.15%
Bootstrap support for Q5JJE5 as seed ortholog is 91%.
Bootstrap support for H3CT20 as seed ortholog is 64%.
Alternative seed ortholog is H3CS57 (11 bits away from this cluster)

Group of orthologs #284. Best score 81 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:81 T.nigroviridis:81

Q5JIU6              	100.00%		H3C5S7              	100.00%
Bootstrap support for Q5JIU6 as seed ortholog is 100%.
Bootstrap support for H3C5S7 as seed ortholog is 100%.

Group of orthologs #285. Best score 81 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:81 T.nigroviridis:81

Q5JGS7              	100.00%		H3D4C1              	100.00%
Bootstrap support for Q5JGS7 as seed ortholog is 100%.
Bootstrap support for H3D4C1 as seed ortholog is 100%.

Group of orthologs #286. Best score 81 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:81 T.nigroviridis:81

Q5JE49              	100.00%		Q4S739              	100.00%
Bootstrap support for Q5JE49 as seed ortholog is 100%.
Bootstrap support for Q4S739 as seed ortholog is 100%.

Group of orthologs #287. Best score 80 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:80 T.nigroviridis:10

Q5JHP6              	100.00%		Q4SD17              	100.00%
Bootstrap support for Q5JHP6 as seed ortholog is 100%.
Bootstrap support for Q4SD17 as seed ortholog is 67%.
Alternative seed ortholog is H3C9Q8 (10 bits away from this cluster)

Group of orthologs #288. Best score 79 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:79 T.nigroviridis:79

Q5JJC3              	100.00%		H3DGW0              	100.00%
Bootstrap support for Q5JJC3 as seed ortholog is 100%.
Bootstrap support for H3DGW0 as seed ortholog is 100%.

Group of orthologs #289. Best score 78 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:78 T.nigroviridis:19

Q5JHM0              	100.00%		H3CEC2              	100.00%
Q5JJC2              	15.89%		
Bootstrap support for Q5JHM0 as seed ortholog is 100%.
Bootstrap support for H3CEC2 as seed ortholog is 69%.
Alternative seed ortholog is Q4RN61 (19 bits away from this cluster)

Group of orthologs #290. Best score 78 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:78 T.nigroviridis:78

Q5JI47              	100.00%		H3CMA6              	100.00%
                    	       		Q4STI0              	55.92%
Bootstrap support for Q5JI47 as seed ortholog is 100%.
Bootstrap support for H3CMA6 as seed ortholog is 100%.

Group of orthologs #291. Best score 77 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:77 T.nigroviridis:77

Q5JIY3              	100.00%		H3DL02              	100.00%
                    	       		H3CT97              	54.20%
Bootstrap support for Q5JIY3 as seed ortholog is 100%.
Bootstrap support for H3DL02 as seed ortholog is 100%.

Group of orthologs #292. Best score 77 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:77 T.nigroviridis:77

Q5JEL5              	100.00%		H3CXV4              	100.00%
Bootstrap support for Q5JEL5 as seed ortholog is 100%.
Bootstrap support for H3CXV4 as seed ortholog is 100%.

Group of orthologs #293. Best score 76 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:76 T.nigroviridis:76

Q5JIX8              	100.00%		H3CSA5              	100.00%
Bootstrap support for Q5JIX8 as seed ortholog is 100%.
Bootstrap support for H3CSA5 as seed ortholog is 100%.

Group of orthologs #294. Best score 76 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:76 T.nigroviridis:76

Q5JDG1              	100.00%		H3D1B9              	100.00%
Bootstrap support for Q5JDG1 as seed ortholog is 100%.
Bootstrap support for H3D1B9 as seed ortholog is 100%.

Group of orthologs #295. Best score 76 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:76 T.nigroviridis:76

Q5JG26              	100.00%		Q4SDG2              	100.00%
Bootstrap support for Q5JG26 as seed ortholog is 100%.
Bootstrap support for Q4SDG2 as seed ortholog is 100%.

Group of orthologs #296. Best score 75 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:75 T.nigroviridis:75

Q5JJ26              	100.00%		H3D8I3              	100.00%
                    	       		H3CLW3              	78.08%
Bootstrap support for Q5JJ26 as seed ortholog is 100%.
Bootstrap support for H3D8I3 as seed ortholog is 100%.

Group of orthologs #297. Best score 74 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 T.nigroviridis:74

Q5JIM5              	100.00%		H3CVP0              	100.00%
Q5JIM4              	35.89%		
Q5JI36              	22.26%		
Q5JJ83              	11.91%		
Bootstrap support for Q5JIM5 as seed ortholog is 100%.
Bootstrap support for H3CVP0 as seed ortholog is 100%.

Group of orthologs #298. Best score 74 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 T.nigroviridis:74

Q5JJ48              	100.00%		H3DB38              	100.00%
Bootstrap support for Q5JJ48 as seed ortholog is 100%.
Bootstrap support for H3DB38 as seed ortholog is 100%.

Group of orthologs #299. Best score 74 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 T.nigroviridis:14

Q5JF34              	100.00%		Q4RHC2              	100.00%
Bootstrap support for Q5JF34 as seed ortholog is 100%.
Bootstrap support for Q4RHC2 as seed ortholog is 67%.
Alternative seed ortholog is Q4S925 (14 bits away from this cluster)

Group of orthologs #300. Best score 73 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:73 T.nigroviridis:73

Q5JDC4              	100.00%		H3D4C5              	100.00%
Bootstrap support for Q5JDC4 as seed ortholog is 100%.
Bootstrap support for H3D4C5 as seed ortholog is 100%.

Group of orthologs #301. Best score 72 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:72 T.nigroviridis:72

Q5JE35              	100.00%		H3C3E9              	100.00%
Bootstrap support for Q5JE35 as seed ortholog is 100%.
Bootstrap support for H3C3E9 as seed ortholog is 100%.

Group of orthologs #302. Best score 72 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:72 T.nigroviridis:72

Q5JH21              	100.00%		H3CC71              	100.00%
Bootstrap support for Q5JH21 as seed ortholog is 100%.
Bootstrap support for H3CC71 as seed ortholog is 100%.

Group of orthologs #303. Best score 71 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:71 T.nigroviridis:71

Q5JDS0              	100.00%		H3CTR1              	100.00%
                    	       		Q4SAA3              	76.50%
Bootstrap support for Q5JDS0 as seed ortholog is 100%.
Bootstrap support for H3CTR1 as seed ortholog is 100%.

Group of orthologs #304. Best score 71 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:71 T.nigroviridis:71

Q5JHC0              	100.00%		H3CYM5              	100.00%
Q5JHG7              	6.31%		
Bootstrap support for Q5JHC0 as seed ortholog is 100%.
Bootstrap support for H3CYM5 as seed ortholog is 100%.

Group of orthologs #305. Best score 71 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:22 T.nigroviridis:71

Q5JG46              	100.00%		H3CAK9              	100.00%
Bootstrap support for Q5JG46 as seed ortholog is 76%.
Bootstrap support for H3CAK9 as seed ortholog is 100%.

Group of orthologs #306. Best score 71 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:71 T.nigroviridis:71

Q8X268              	100.00%		H3D657              	100.00%
Bootstrap support for Q8X268 as seed ortholog is 100%.
Bootstrap support for H3D657 as seed ortholog is 100%.

Group of orthologs #307. Best score 70 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:70 T.nigroviridis:70

Q5JDM6              	100.00%		H3CR46              	100.00%
Bootstrap support for Q5JDM6 as seed ortholog is 100%.
Bootstrap support for H3CR46 as seed ortholog is 100%.

Group of orthologs #308. Best score 69 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:69 T.nigroviridis:69

Q5JIK4              	100.00%		H3DE66              	100.00%
Q5JGT0              	8.64%		
Q5JIW7              	5.25%		
Bootstrap support for Q5JIK4 as seed ortholog is 100%.
Bootstrap support for H3DE66 as seed ortholog is 100%.

Group of orthologs #309. Best score 68 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:68 T.nigroviridis:68

Q5JII2              	100.00%		H3D0P3              	100.00%
                    	       		Q4T4T6              	69.73%
Bootstrap support for Q5JII2 as seed ortholog is 100%.
Bootstrap support for H3D0P3 as seed ortholog is 100%.

Group of orthologs #310. Best score 68 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:68 T.nigroviridis:68

Q6I7B6              	100.00%		H3D026              	100.00%
Q68BJ7              	33.37%		
Bootstrap support for Q6I7B6 as seed ortholog is 100%.
Bootstrap support for H3D026 as seed ortholog is 100%.

Group of orthologs #311. Best score 68 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:68 T.nigroviridis:68

Q5JJC1              	100.00%		H3DM24              	100.00%
                    	       		H3DGE5              	62.32%
Bootstrap support for Q5JJC1 as seed ortholog is 100%.
Bootstrap support for H3DM24 as seed ortholog is 100%.

Group of orthologs #312. Best score 67 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:67 T.nigroviridis:7

Q5JFY8              	100.00%		H3CX00              	100.00%
Bootstrap support for Q5JFY8 as seed ortholog is 100%.
Bootstrap support for H3CX00 as seed ortholog is 56%.
Alternative seed ortholog is H3CRC0 (7 bits away from this cluster)

Group of orthologs #313. Best score 67 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:67 T.nigroviridis:16

Q8X270              	100.00%		Q4REG4              	100.00%
Bootstrap support for Q8X270 as seed ortholog is 100%.
Bootstrap support for Q4REG4 as seed ortholog is 81%.

Group of orthologs #314. Best score 66 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:66 T.nigroviridis:66

Q5JF76              	100.00%		Q4SKK0              	100.00%
                    	       		H3CV89              	52.39%
Bootstrap support for Q5JF76 as seed ortholog is 100%.
Bootstrap support for Q4SKK0 as seed ortholog is 100%.

Group of orthologs #315. Best score 66 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:66 T.nigroviridis:66

Q5JGN3              	100.00%		H3CV74              	100.00%
Bootstrap support for Q5JGN3 as seed ortholog is 100%.
Bootstrap support for H3CV74 as seed ortholog is 100%.

Group of orthologs #316. Best score 66 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:66 T.nigroviridis:66

Q5JHS3              	100.00%		H3D2G0              	100.00%
Bootstrap support for Q5JHS3 as seed ortholog is 100%.
Bootstrap support for H3D2G0 as seed ortholog is 100%.

Group of orthologs #317. Best score 65 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:65 T.nigroviridis:65

Q5JFW9              	100.00%		H3CN45              	100.00%
                    	       		Q4STM3              	16.15%
Bootstrap support for Q5JFW9 as seed ortholog is 100%.
Bootstrap support for H3CN45 as seed ortholog is 100%.

Group of orthologs #318. Best score 65 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:65 T.nigroviridis:65

Q5JFW0              	100.00%		H3CNX6              	100.00%
Bootstrap support for Q5JFW0 as seed ortholog is 100%.
Bootstrap support for H3CNX6 as seed ortholog is 100%.

Group of orthologs #319. Best score 65 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:13 T.nigroviridis:65

Q5JIE3              	100.00%		H3DAQ6              	100.00%
Bootstrap support for Q5JIE3 as seed ortholog is 71%.
Alternative seed ortholog is Q5JE63 (13 bits away from this cluster)
Bootstrap support for H3DAQ6 as seed ortholog is 100%.

Group of orthologs #320. Best score 64 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:64 T.nigroviridis:64

Q5JFH7              	100.00%		H3CAD0              	100.00%
Q5JEW2              	37.15%		
Q5JIA8              	36.91%		
Q5JEN7              	36.19%		
Q5JEY6              	36.19%		
Bootstrap support for Q5JFH7 as seed ortholog is 100%.
Bootstrap support for H3CAD0 as seed ortholog is 100%.

Group of orthologs #321. Best score 64 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:64 T.nigroviridis:64

Q5JE39              	100.00%		H3CSP7              	100.00%
Q5JD05              	15.36%		H3DJZ8              	15.88%
Bootstrap support for Q5JE39 as seed ortholog is 100%.
Bootstrap support for H3CSP7 as seed ortholog is 100%.

Group of orthologs #322. Best score 64 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:64 T.nigroviridis:64

Q5JI42              	100.00%		H3CXQ3              	100.00%
                    	       		Q4TBZ1              	100.00%
                    	       		H3CMF9              	54.91%
Bootstrap support for Q5JI42 as seed ortholog is 100%.
Bootstrap support for H3CXQ3 as seed ortholog is 100%.
Bootstrap support for Q4TBZ1 as seed ortholog is 100%.

Group of orthologs #323. Best score 64 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:64 T.nigroviridis:64

Q5JDG6              	100.00%		H3DNA9              	100.00%
                    	       		H3D7F5              	21.03%
Bootstrap support for Q5JDG6 as seed ortholog is 100%.
Bootstrap support for H3DNA9 as seed ortholog is 100%.

Group of orthologs #324. Best score 64 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:64 T.nigroviridis:64

Q5JHT3              	100.00%		H3C0R0              	100.00%
Bootstrap support for Q5JHT3 as seed ortholog is 100%.
Bootstrap support for H3C0R0 as seed ortholog is 100%.

Group of orthologs #325. Best score 64 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:64 T.nigroviridis:64

Q5JJH0              	100.00%		H3D8A1              	100.00%
Bootstrap support for Q5JJH0 as seed ortholog is 100%.
Bootstrap support for H3D8A1 as seed ortholog is 100%.

Group of orthologs #326. Best score 64 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:64 T.nigroviridis:64

Q5JJF6              	100.00%		Q4RMB7              	100.00%
Bootstrap support for Q5JJF6 as seed ortholog is 100%.
Bootstrap support for Q4RMB7 as seed ortholog is 100%.

Group of orthologs #327. Best score 63 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:63 T.nigroviridis:63

Q5JEE0              	100.00%		H3DPM8              	100.00%
Bootstrap support for Q5JEE0 as seed ortholog is 100%.
Bootstrap support for H3DPM8 as seed ortholog is 100%.

Group of orthologs #328. Best score 62 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:62 T.nigroviridis:62

Q5JE10              	100.00%		H3D130              	100.00%
                    	       		H3CWD3              	22.92%
                    	       		H3BZW7              	19.19%
                    	       		H3D9U1              	16.34%
                    	       		H3DG56              	12.50%
Bootstrap support for Q5JE10 as seed ortholog is 100%.
Bootstrap support for H3D130 as seed ortholog is 100%.

Group of orthologs #329. Best score 62 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:62 T.nigroviridis:62

Q5JJ13              	100.00%		H3DM02              	100.00%
Q5JJ46              	7.69%		
Q5JIA3              	5.61%		
Q5JJ23              	5.61%		
Bootstrap support for Q5JJ13 as seed ortholog is 100%.
Bootstrap support for H3DM02 as seed ortholog is 100%.

Group of orthologs #330. Best score 61 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 T.nigroviridis:61

Q5JG68              	100.00%		H3DAQ1              	100.00%
                    	       		H3DAQ0              	54.67%
Bootstrap support for Q5JG68 as seed ortholog is 100%.
Bootstrap support for H3DAQ1 as seed ortholog is 100%.

Group of orthologs #331. Best score 61 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 T.nigroviridis:61

Q5JJG9              	100.00%		Q4SMV9              	100.00%
                    	       		H3DQT9              	23.47%
Bootstrap support for Q5JJG9 as seed ortholog is 100%.
Bootstrap support for Q4SMV9 as seed ortholog is 100%.

Group of orthologs #332. Best score 61 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 T.nigroviridis:61

Q5JE55              	100.00%		H3CSG2              	100.00%
Bootstrap support for Q5JE55 as seed ortholog is 100%.
Bootstrap support for H3CSG2 as seed ortholog is 100%.

Group of orthologs #333. Best score 61 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 T.nigroviridis:61

Q5JGR4              	100.00%		Q4SBM8              	100.00%
Bootstrap support for Q5JGR4 as seed ortholog is 100%.
Bootstrap support for Q4SBM8 as seed ortholog is 100%.

Group of orthologs #334. Best score 60 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:60 T.nigroviridis:60

Q5JGZ3              	100.00%		H3D1Z4              	100.00%
Q5JGZ2              	5.79%		H3CDY3              	39.35%
Bootstrap support for Q5JGZ3 as seed ortholog is 100%.
Bootstrap support for H3D1Z4 as seed ortholog is 100%.

Group of orthologs #335. Best score 60 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:60 T.nigroviridis:60

Q5JJ61              	100.00%		H3D241              	100.00%
                    	       		H3CP60              	72.28%
Bootstrap support for Q5JJ61 as seed ortholog is 100%.
Bootstrap support for H3D241 as seed ortholog is 100%.

Group of orthologs #336. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 T.nigroviridis:59

Q5JHS0              	100.00%		H3CYY7              	100.00%
Bootstrap support for Q5JHS0 as seed ortholog is 100%.
Bootstrap support for H3CYY7 as seed ortholog is 100%.

Group of orthologs #337. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 T.nigroviridis:59

Q5JE51              	100.00%		H3DE84              	100.00%
Bootstrap support for Q5JE51 as seed ortholog is 100%.
Bootstrap support for H3DE84 as seed ortholog is 100%.

Group of orthologs #338. Best score 58 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:58 T.nigroviridis:58

Q5JIY8              	100.00%		H3BY52              	100.00%
Bootstrap support for Q5JIY8 as seed ortholog is 100%.
Bootstrap support for H3BY52 as seed ortholog is 100%.

Group of orthologs #339. Best score 58 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:58 T.nigroviridis:58

Q5JJF5              	100.00%		H3CRL7              	100.00%
Bootstrap support for Q5JJF5 as seed ortholog is 100%.
Bootstrap support for H3CRL7 as seed ortholog is 100%.

Group of orthologs #340. Best score 58 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:58 T.nigroviridis:58

Q5JEM0              	100.00%		H3DAW4              	100.00%
Bootstrap support for Q5JEM0 as seed ortholog is 100%.
Bootstrap support for H3DAW4 as seed ortholog is 100%.

Group of orthologs #341. Best score 57 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:57 T.nigroviridis:57

Q5JIE1              	100.00%		H3CLU8              	100.00%
Bootstrap support for Q5JIE1 as seed ortholog is 100%.
Bootstrap support for H3CLU8 as seed ortholog is 100%.

Group of orthologs #342. Best score 56 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:56 T.nigroviridis:56

Q5JGT6              	100.00%		H3C3K7              	100.00%
Bootstrap support for Q5JGT6 as seed ortholog is 100%.
Bootstrap support for H3C3K7 as seed ortholog is 100%.

Group of orthologs #343. Best score 56 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:56 T.nigroviridis:56

Q5JE86              	100.00%		H3D996              	100.00%
Bootstrap support for Q5JE86 as seed ortholog is 100%.
Bootstrap support for H3D996 as seed ortholog is 100%.

Group of orthologs #344. Best score 56 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:56 T.nigroviridis:56

Q5JDG7              	100.00%		H3DJ47              	100.00%
Bootstrap support for Q5JDG7 as seed ortholog is 100%.
Bootstrap support for H3DJ47 as seed ortholog is 100%.

Group of orthologs #345. Best score 55 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:55 T.nigroviridis:55

Q5JF49              	100.00%		Q4RJ32              	100.00%
Bootstrap support for Q5JF49 as seed ortholog is 100%.
Bootstrap support for Q4RJ32 as seed ortholog is 100%.

Group of orthologs #346. Best score 55 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:55 T.nigroviridis:55

Q5JGM7              	100.00%		Q4RX41              	100.00%
Bootstrap support for Q5JGM7 as seed ortholog is 100%.
Bootstrap support for Q4RX41 as seed ortholog is 100%.

Group of orthologs #347. Best score 54 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:54 T.nigroviridis:54

Q5JEN3              	100.00%		H3C2C4              	100.00%
                    	       		H3DAT0              	20.00%
                    	       		Q4SH08              	18.67%
                    	       		H3CUY9              	16.89%
                    	       		Q4SZQ5              	16.89%
Bootstrap support for Q5JEN3 as seed ortholog is 100%.
Bootstrap support for H3C2C4 as seed ortholog is 100%.

Group of orthologs #348. Best score 54 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:54 T.nigroviridis:54

Q5JIL1              	100.00%		Q4S3J4              	100.00%
Q5JGG3              	10.98%		
Bootstrap support for Q5JIL1 as seed ortholog is 100%.
Bootstrap support for Q4S3J4 as seed ortholog is 100%.

Group of orthologs #349. Best score 54 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:54 T.nigroviridis:54

Q5JDR9              	100.00%		H3DN72              	100.00%
Bootstrap support for Q5JDR9 as seed ortholog is 100%.
Bootstrap support for H3DN72 as seed ortholog is 100%.

Group of orthologs #350. Best score 54 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:54 T.nigroviridis:54

Q5JH80              	100.00%		Q4SGE5              	100.00%
Bootstrap support for Q5JH80 as seed ortholog is 100%.
Bootstrap support for Q4SGE5 as seed ortholog is 100%.

Group of orthologs #351. Best score 54 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:54 T.nigroviridis:54

Q5JFX3              	100.00%		Q4T8R7              	100.00%
Bootstrap support for Q5JFX3 as seed ortholog is 100%.
Bootstrap support for Q4T8R7 as seed ortholog is 100%.

Group of orthologs #352. Best score 53 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:53 T.nigroviridis:53

Q5JGN8              	100.00%		H3CU15              	100.00%
Q5JHQ2              	6.22%		
Bootstrap support for Q5JGN8 as seed ortholog is 100%.
Bootstrap support for H3CU15 as seed ortholog is 100%.

Group of orthologs #353. Best score 53 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:53 T.nigroviridis:53

Q5JIU7              	100.00%		Q4SQJ1              	100.00%
                    	       		H3DDR0              	50.00%
Bootstrap support for Q5JIU7 as seed ortholog is 100%.
Bootstrap support for Q4SQJ1 as seed ortholog is 100%.

Group of orthologs #354. Best score 53 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:53 T.nigroviridis:53

Q5JDB1              	100.00%		H3DII7              	100.00%
Bootstrap support for Q5JDB1 as seed ortholog is 100%.
Bootstrap support for H3DII7 as seed ortholog is 100%.

Group of orthologs #355. Best score 53 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:53 T.nigroviridis:53

Q5JE65              	100.00%		Q4SSZ9              	100.00%
Bootstrap support for Q5JE65 as seed ortholog is 100%.
Bootstrap support for Q4SSZ9 as seed ortholog is 100%.

Group of orthologs #356. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 T.nigroviridis:52

Q5JJ66              	100.00%		H3CKQ0              	100.00%
Q5JJ71              	5.75%		H3D003              	11.11%
Bootstrap support for Q5JJ66 as seed ortholog is 100%.
Bootstrap support for H3CKQ0 as seed ortholog is 100%.

Group of orthologs #357. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 T.nigroviridis:52

Q5JDC7              	100.00%		H3CW12              	100.00%
                    	       		H3CAG3              	90.95%
Bootstrap support for Q5JDC7 as seed ortholog is 100%.
Bootstrap support for H3CW12 as seed ortholog is 100%.

Group of orthologs #358. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 T.nigroviridis:52

Q5JF78              	100.00%		H3DKZ5              	100.00%
Bootstrap support for Q5JF78 as seed ortholog is 100%.
Bootstrap support for H3DKZ5 as seed ortholog is 100%.

Group of orthologs #359. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 T.nigroviridis:52

Q5JH78              	100.00%		Q4SZY2              	100.00%
Bootstrap support for Q5JH78 as seed ortholog is 100%.
Bootstrap support for Q4SZY2 as seed ortholog is 100%.

Group of orthologs #360. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 T.nigroviridis:52

Q5JJG2              	100.00%		Q4SC00              	100.00%
Bootstrap support for Q5JJG2 as seed ortholog is 100%.
Bootstrap support for Q4SC00 as seed ortholog is 100%.

Group of orthologs #361. Best score 51 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:51 T.nigroviridis:9

Q8NKS4              	100.00%		H3CUZ0              	100.00%
Q5JJ90              	12.43%		
Bootstrap support for Q8NKS4 as seed ortholog is 100%.
Bootstrap support for H3CUZ0 as seed ortholog is 57%.
Alternative seed ortholog is Q4S5D5 (9 bits away from this cluster)

Group of orthologs #362. Best score 51 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:51 T.nigroviridis:5

Q5JDG9              	100.00%		H3DN54              	100.00%
Bootstrap support for Q5JDG9 as seed ortholog is 100%.
Bootstrap support for H3DN54 as seed ortholog is 55%.
Alternative seed ortholog is H3CJ60 (5 bits away from this cluster)

Group of orthologs #363. Best score 50 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:50 T.nigroviridis:50

Q5JGZ1              	100.00%		H3DBQ5              	100.00%
Q5JFS5              	100.00%		H3CBT0              	100.00%
Q5JDF8              	12.12%		H3DNG9              	72.08%
Q5JH08              	10.91%		
Bootstrap support for Q5JGZ1 as seed ortholog is 100%.
Bootstrap support for Q5JFS5 as seed ortholog is 100%.
Bootstrap support for H3DBQ5 as seed ortholog is 100%.
Bootstrap support for H3CBT0 as seed ortholog is 100%.

Group of orthologs #364. Best score 50 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:50 T.nigroviridis:50

Q5JFE3              	100.00%		H3C0Z2              	100.00%
Bootstrap support for Q5JFE3 as seed ortholog is 100%.
Bootstrap support for H3C0Z2 as seed ortholog is 100%.

Group of orthologs #365. Best score 50 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:50 T.nigroviridis:50

Q5JI19              	100.00%		H3CD34              	100.00%
Bootstrap support for Q5JI19 as seed ortholog is 100%.
Bootstrap support for H3CD34 as seed ortholog is 100%.

Group of orthologs #366. Best score 50 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:50 T.nigroviridis:50

Q5JDA4              	100.00%		H3CYC3              	100.00%
Bootstrap support for Q5JDA4 as seed ortholog is 100%.
Bootstrap support for H3CYC3 as seed ortholog is 100%.

Group of orthologs #367. Best score 50 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:50 T.nigroviridis:50

Q5JD73              	100.00%		H3DPD3              	100.00%
Bootstrap support for Q5JD73 as seed ortholog is 100%.
Bootstrap support for H3DPD3 as seed ortholog is 100%.

Group of orthologs #368. Best score 49 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:49 T.nigroviridis:2

Q5JIE0              	100.00%		Q4SYV4              	100.00%
Bootstrap support for Q5JIE0 as seed ortholog is 100%.
Bootstrap support for Q4SYV4 as seed ortholog is 64%.
Alternative seed ortholog is H3D557 (2 bits away from this cluster)

Group of orthologs #369. Best score 48 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:48 T.nigroviridis:48

Q5JG48              	100.00%		H3CV83              	100.00%
                    	       		H3CV87              	37.27%
                    	       		H3DIY5              	11.70%
                    	       		Q4T7D3              	6.54%
                    	       		H3C7X7              	6.31%
                    	       		H3DGG1              	6.19%
                    	       		H3DAV1              	5.85%
Bootstrap support for Q5JG48 as seed ortholog is 100%.
Bootstrap support for H3CV83 as seed ortholog is 100%.

Group of orthologs #370. Best score 48 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:48 T.nigroviridis:48

Q5JIR4              	100.00%		H3CCG2              	100.00%
Bootstrap support for Q5JIR4 as seed ortholog is 100%.
Bootstrap support for H3CCG2 as seed ortholog is 100%.

Group of orthologs #371. Best score 47 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:47 T.nigroviridis:47

Q5JGF8              	100.00%		H3DAS6              	100.00%
                    	       		H3DCP3              	78.62%
                    	       		H3DDX8              	66.73%
Bootstrap support for Q5JGF8 as seed ortholog is 100%.
Bootstrap support for H3DAS6 as seed ortholog is 100%.

Group of orthologs #372. Best score 47 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:47 T.nigroviridis:47

Q5JE50              	100.00%		Q4SM10              	100.00%
                    	       		H3DLT8              	83.46%
Bootstrap support for Q5JE50 as seed ortholog is 100%.
Bootstrap support for Q4SM10 as seed ortholog is 100%.

Group of orthologs #373. Best score 47 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:47 T.nigroviridis:47

Q5JFQ4              	100.00%		H3DFF1              	100.00%
Bootstrap support for Q5JFQ4 as seed ortholog is 100%.
Bootstrap support for H3DFF1 as seed ortholog is 100%.

Group of orthologs #374. Best score 46 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:46 T.nigroviridis:46

Q5JJF7              	100.00%		Q4RGD3              	100.00%
Bootstrap support for Q5JJF7 as seed ortholog is 100%.
Bootstrap support for Q4RGD3 as seed ortholog is 100%.

Group of orthologs #375. Best score 45 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:45 T.nigroviridis:45

Q5JH23              	100.00%		Q4REF8              	100.00%
                    	       		H3D765              	33.12%
Bootstrap support for Q5JH23 as seed ortholog is 100%.
Bootstrap support for Q4REF8 as seed ortholog is 100%.

Group of orthologs #376. Best score 45 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:45 T.nigroviridis:45

Q5JDA5              	100.00%		H3BY79              	100.00%
Bootstrap support for Q5JDA5 as seed ortholog is 100%.
Bootstrap support for H3BY79 as seed ortholog is 100%.

Group of orthologs #377. Best score 44 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:44 T.nigroviridis:44

Q5JHR1              	100.00%		H3CQ52              	100.00%
Q5JFH5              	11.60%		
Bootstrap support for Q5JHR1 as seed ortholog is 100%.
Bootstrap support for H3CQ52 as seed ortholog is 100%.

Group of orthologs #378. Best score 44 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:44 T.nigroviridis:44

Q5JIR5              	100.00%		H3CLJ2              	100.00%
Bootstrap support for Q5JIR5 as seed ortholog is 100%.
Bootstrap support for H3CLJ2 as seed ortholog is 100%.

Group of orthologs #379. Best score 43 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:43 T.nigroviridis:43

Q5JJE4              	100.00%		H3CV33              	100.00%
Bootstrap support for Q5JJE4 as seed ortholog is 100%.
Bootstrap support for H3CV33 as seed ortholog is 100%.

Group of orthologs #380. Best score 43 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:43 T.nigroviridis:43

Q5JE88              	100.00%		Q4TAB3              	100.00%
Bootstrap support for Q5JE88 as seed ortholog is 100%.
Bootstrap support for Q4TAB3 as seed ortholog is 100%.

Group of orthologs #381. Best score 41 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:41 T.nigroviridis:41

Q5JJ22              	100.00%		H3D9A5              	100.00%
Q5JHB8              	7.54%		
Bootstrap support for Q5JJ22 as seed ortholog is 100%.
Bootstrap support for H3D9A5 as seed ortholog is 100%.

Group of orthologs #382. Best score 40 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:40 T.nigroviridis:40

Q5JDL4              	100.00%		Q4RLT9              	100.00%
Bootstrap support for Q5JDL4 as seed ortholog is 100%.
Bootstrap support for Q4RLT9 as seed ortholog is 100%.