###################################
366 groups of orthologs
432 in-paralogs from P.kodakaraensis
658 in-paralogs from S.scrofa
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 842 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:842 S.scrofa:306

Q5JE32              	100.00%		I3LGP4              	100.00%
Bootstrap support for Q5JE32 as seed ortholog is 100%.
Bootstrap support for I3LGP4 as seed ortholog is 100%.

Group of orthologs #2. Best score 675 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:675 S.scrofa:43

Q5JE33              	100.00%		I3LJR4              	100.00%
Bootstrap support for Q5JE33 as seed ortholog is 100%.
Bootstrap support for I3LJR4 as seed ortholog is 75%.

Group of orthologs #3. Best score 639 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:639 S.scrofa:170

Q5JE98              	100.00%		P03974              	100.00%
Q9V2X2              	51.99%		F1SIH8              	99.27%
Bootstrap support for Q5JE98 as seed ortholog is 100%.
Bootstrap support for P03974 as seed ortholog is 99%.

Group of orthologs #4. Best score 571 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:571 S.scrofa:422

Q5JIR2              	100.00%		F1RMZ8              	100.00%
                    	       		F1SLE5              	54.50%
Bootstrap support for Q5JIR2 as seed ortholog is 100%.
Bootstrap support for F1RMZ8 as seed ortholog is 100%.

Group of orthologs #5. Best score 569 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:569 S.scrofa:436

Q5JIR3              	100.00%		Q29048              	100.00%
Bootstrap support for Q5JIR3 as seed ortholog is 100%.
Bootstrap support for Q29048 as seed ortholog is 100%.

Group of orthologs #6. Best score 557 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:557 S.scrofa:396

Q5JIS8              	100.00%		P79384              	100.00%
Bootstrap support for Q5JIS8 as seed ortholog is 100%.
Bootstrap support for P79384 as seed ortholog is 100%.

Group of orthologs #7. Best score 551 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:551 S.scrofa:551

Q5JGF1              	100.00%		F1SF78              	100.00%
                    	       		F1SQS3              	17.74%
Bootstrap support for Q5JGF1 as seed ortholog is 100%.
Bootstrap support for F1SF78 as seed ortholog is 100%.

Group of orthologs #8. Best score 531 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:531 S.scrofa:531

Q5JIG4              	100.00%		Q8MI68              	100.00%
Bootstrap support for Q5JIG4 as seed ortholog is 100%.
Bootstrap support for Q8MI68 as seed ortholog is 100%.

Group of orthologs #9. Best score 528 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:528 S.scrofa:441

Q5JDX6              	100.00%		F1RS49              	100.00%
Bootstrap support for Q5JDX6 as seed ortholog is 100%.
Bootstrap support for F1RS49 as seed ortholog is 100%.

Group of orthologs #10. Best score 523 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:523 S.scrofa:352

Q5JDF4              	100.00%		F1RPH3              	100.00%
Bootstrap support for Q5JDF4 as seed ortholog is 100%.
Bootstrap support for F1RPH3 as seed ortholog is 100%.

Group of orthologs #11. Best score 462 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:462 S.scrofa:380

Q8NKR7              	100.00%		F1RM15              	100.00%
Bootstrap support for Q8NKR7 as seed ortholog is 100%.
Bootstrap support for F1RM15 as seed ortholog is 100%.

Group of orthologs #12. Best score 462 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:462 S.scrofa:138

Q5JJ31              	100.00%		F1SUF6              	100.00%
Bootstrap support for Q5JJ31 as seed ortholog is 100%.
Bootstrap support for F1SUF6 as seed ortholog is 98%.

Group of orthologs #13. Best score 458 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:458 S.scrofa:458

Q5JCZ1              	100.00%		F2Z5V0              	100.00%
Bootstrap support for Q5JCZ1 as seed ortholog is 100%.
Bootstrap support for F2Z5V0 as seed ortholog is 100%.

Group of orthologs #14. Best score 457 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:457 S.scrofa:219

Q5JFZ3              	100.00%		I3LII3              	100.00%
                    	       		F1RQZ9              	13.74%
Bootstrap support for Q5JFZ3 as seed ortholog is 100%.
Bootstrap support for I3LII3 as seed ortholog is 99%.

Group of orthologs #15. Best score 447 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:447 S.scrofa:157

Q5JFZ4              	100.00%		Q0PY11              	100.00%
                    	       		F1STM4              	79.34%
                    	       		F1STN7              	79.13%
Bootstrap support for Q5JFZ4 as seed ortholog is 100%.
Bootstrap support for Q0PY11 as seed ortholog is 99%.

Group of orthologs #16. Best score 440 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:361 S.scrofa:303

Q5JEV6              	100.00%		Q1KYT0              	100.00%
                    	       		I3LCN1              	64.86%
                    	       		I3LK59              	12.50%
Bootstrap support for Q5JEV6 as seed ortholog is 100%.
Bootstrap support for Q1KYT0 as seed ortholog is 100%.

Group of orthologs #17. Best score 415 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:415 S.scrofa:113

O93623              	100.00%		K7GRB9              	100.00%
                    	       		F1RVC1              	78.21%
Bootstrap support for O93623 as seed ortholog is 100%.
Bootstrap support for K7GRB9 as seed ortholog is 97%.

Group of orthologs #18. Best score 408 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:408 S.scrofa:42

Q5JJA2              	100.00%		I3LMC6              	100.00%
                    	       		F1SM58              	32.82%
                    	       		F1SJW1              	20.91%
Bootstrap support for Q5JJA2 as seed ortholog is 100%.
Bootstrap support for I3LMC6 as seed ortholog is 74%.
Alternative seed ortholog is F1SH51 (42 bits away from this cluster)

Group of orthologs #19. Best score 404 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:334 S.scrofa:404

Q5JH71              	100.00%		F1SPM6              	100.00%
                    	       		F1S5Q1              	55.84%
Bootstrap support for Q5JH71 as seed ortholog is 100%.
Bootstrap support for F1SPM6 as seed ortholog is 100%.

Group of orthologs #20. Best score 394 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:394 S.scrofa:24

Q52500              	100.00%		F1SQN1              	100.00%
P61111              	72.12%		
Bootstrap support for Q52500 as seed ortholog is 100%.
Bootstrap support for F1SQN1 as seed ortholog is 73%.
Alternative seed ortholog is F1SB63 (24 bits away from this cluster)

Group of orthologs #21. Best score 392 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:392 S.scrofa:392

Q5JID8              	100.00%		F1SII4              	100.00%
Bootstrap support for Q5JID8 as seed ortholog is 100%.
Bootstrap support for F1SII4 as seed ortholog is 100%.

Group of orthologs #22. Best score 391 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:391 S.scrofa:23

Q5JGE5              	100.00%		F1RIP4              	100.00%
Bootstrap support for Q5JGE5 as seed ortholog is 100%.
Bootstrap support for F1RIP4 as seed ortholog is 69%.
Alternative seed ortholog is I3L742 (23 bits away from this cluster)

Group of orthologs #23. Best score 375 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:375 S.scrofa:375

Q5JGR9              	100.00%		F1STE8              	100.00%
Bootstrap support for Q5JGR9 as seed ortholog is 100%.
Bootstrap support for F1STE8 as seed ortholog is 100%.

Group of orthologs #24. Best score 370 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:370 S.scrofa:234

Q5JDL3              	100.00%		I3L7F7              	100.00%
                    	       		I3LUM9              	50.26%
Bootstrap support for Q5JDL3 as seed ortholog is 100%.
Bootstrap support for I3L7F7 as seed ortholog is 100%.

Group of orthologs #25. Best score 366 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:366 S.scrofa:11

Q5JHS5              	100.00%		P62197              	100.00%
Bootstrap support for Q5JHS5 as seed ortholog is 100%.
Bootstrap support for P62197 as seed ortholog is 62%.
Alternative seed ortholog is F2Z5J1 (11 bits away from this cluster)

Group of orthologs #26. Best score 364 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:364 S.scrofa:364

Q5JJC8              	100.00%		F2Z5M9              	100.00%
Bootstrap support for Q5JJC8 as seed ortholog is 100%.
Bootstrap support for F2Z5M9 as seed ortholog is 100%.

Group of orthologs #27. Best score 363 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:363 S.scrofa:363

Q5JDZ7              	100.00%		I3LCC2              	100.00%
Bootstrap support for Q5JDZ7 as seed ortholog is 100%.
Bootstrap support for I3LCC2 as seed ortholog is 100%.

Group of orthologs #28. Best score 342 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:342 S.scrofa:209

Q5JJ98              	100.00%		F1SI11              	100.00%
Bootstrap support for Q5JJ98 as seed ortholog is 100%.
Bootstrap support for F1SI11 as seed ortholog is 99%.

Group of orthologs #29. Best score 339 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:339 S.scrofa:339

Q5JED2              	100.00%		Q710C4              	100.00%
                    	       		F1SQY7              	45.52%
                    	       		F1S610              	20.71%
                    	       		F1SMQ4              	19.96%
Bootstrap support for Q5JED2 as seed ortholog is 100%.
Bootstrap support for Q710C4 as seed ortholog is 100%.

Group of orthologs #30. Best score 334 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:334 S.scrofa:334

Q5JD45              	100.00%		F1RYA3              	100.00%
Bootstrap support for Q5JD45 as seed ortholog is 100%.
Bootstrap support for F1RYA3 as seed ortholog is 100%.

Group of orthologs #31. Best score 330 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:330 S.scrofa:39

Q5JIT1              	100.00%		F1SPF3              	100.00%
Bootstrap support for Q5JIT1 as seed ortholog is 100%.
Bootstrap support for F1SPF3 as seed ortholog is 74%.
Alternative seed ortholog is I3L7E5 (39 bits away from this cluster)

Group of orthologs #32. Best score 314 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:314 S.scrofa:314

Q5JIQ2              	100.00%		F1RVN1              	100.00%
Bootstrap support for Q5JIQ2 as seed ortholog is 100%.
Bootstrap support for F1RVN1 as seed ortholog is 100%.

Group of orthologs #33. Best score 309 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:309 S.scrofa:309

Q5JFN4              	100.00%		F1RTV1              	100.00%
Bootstrap support for Q5JFN4 as seed ortholog is 100%.
Bootstrap support for F1RTV1 as seed ortholog is 100%.

Group of orthologs #34. Best score 309 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:309 S.scrofa:309

Q5JFK3              	100.00%		F1RY71              	100.00%
Bootstrap support for Q5JFK3 as seed ortholog is 100%.
Bootstrap support for F1RY71 as seed ortholog is 100%.

Group of orthologs #35. Best score 309 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:309 S.scrofa:210

Q5JEW3              	100.00%		F1S8H4              	100.00%
Bootstrap support for Q5JEW3 as seed ortholog is 100%.
Bootstrap support for F1S8H4 as seed ortholog is 100%.

Group of orthologs #36. Best score 307 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:307 S.scrofa:73

Q5JHP3              	100.00%		F1SKL8              	100.00%
Bootstrap support for Q5JHP3 as seed ortholog is 100%.
Bootstrap support for F1SKL8 as seed ortholog is 97%.

Group of orthologs #37. Best score 302 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:302 S.scrofa:302

Q5JEP3              	100.00%		F1SAP4              	100.00%
Bootstrap support for Q5JEP3 as seed ortholog is 100%.
Bootstrap support for F1SAP4 as seed ortholog is 100%.

Group of orthologs #38. Best score 297 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:297 S.scrofa:297

Q76I93              	100.00%		F1SHL9              	100.00%
                    	       		I3LAK4              	44.89%
Bootstrap support for Q76I93 as seed ortholog is 100%.
Bootstrap support for F1SHL9 as seed ortholog is 100%.

Group of orthologs #39. Best score 295 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:295 S.scrofa:295

Q5JIF8              	100.00%		F1RUV5              	100.00%
Bootstrap support for Q5JIF8 as seed ortholog is 100%.
Bootstrap support for F1RUV5 as seed ortholog is 100%.

Group of orthologs #40. Best score 295 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:295 S.scrofa:177

Q5JE75              	100.00%		F1S5Z3              	100.00%
Bootstrap support for Q5JE75 as seed ortholog is 100%.
Bootstrap support for F1S5Z3 as seed ortholog is 99%.

Group of orthologs #41. Best score 293 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:293 S.scrofa:293

Q5JJH1              	100.00%		F2Z5D0              	100.00%
                    	       		I3LD13              	86.36%
                    	       		I3LB49              	54.73%
Bootstrap support for Q5JJH1 as seed ortholog is 100%.
Bootstrap support for F2Z5D0 as seed ortholog is 100%.

Group of orthologs #42. Best score 283 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:150 S.scrofa:283

Q5JHX4              	100.00%		I3L7K6              	100.00%
Bootstrap support for Q5JHX4 as seed ortholog is 99%.
Bootstrap support for I3L7K6 as seed ortholog is 100%.

Group of orthologs #43. Best score 280 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:198 S.scrofa:175

Q5JET4              	100.00%		F1SKQ1              	100.00%
                    	       		B0M1M6              	14.65%
Bootstrap support for Q5JET4 as seed ortholog is 100%.
Bootstrap support for F1SKQ1 as seed ortholog is 100%.

Group of orthologs #44. Best score 277 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:168 S.scrofa:277

Q5JI16              	100.00%		O19072              	100.00%
Bootstrap support for Q5JI16 as seed ortholog is 100%.
Bootstrap support for O19072 as seed ortholog is 100%.

Group of orthologs #45. Best score 274 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:274 S.scrofa:84

Q5JFM0              	100.00%		F1SML7              	100.00%
                    	       		F1SKI5              	64.10%
Bootstrap support for Q5JFM0 as seed ortholog is 100%.
Bootstrap support for F1SML7 as seed ortholog is 99%.

Group of orthologs #46. Best score 269 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:269 S.scrofa:45

Q5JHC1              	100.00%		F1S1X3              	100.00%
Bootstrap support for Q5JHC1 as seed ortholog is 100%.
Bootstrap support for F1S1X3 as seed ortholog is 84%.

Group of orthologs #47. Best score 268 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:268 S.scrofa:24

Q5JFZ6              	100.00%		A6M931              	100.00%
                    	       		A6M930              	51.11%
                    	       		A6M928              	50.18%
                    	       		I3LLD5              	47.42%
Bootstrap support for Q5JFZ6 as seed ortholog is 100%.
Bootstrap support for A6M931 as seed ortholog is 76%.

Group of orthologs #48. Best score 267 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:267 S.scrofa:57

Q5JGN7              	100.00%		F1RU69              	100.00%
                    	       		Q767M3              	99.22%
Bootstrap support for Q5JGN7 as seed ortholog is 100%.
Bootstrap support for F1RU69 as seed ortholog is 80%.

Group of orthologs #49. Best score 265 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:265 S.scrofa:265

Q5JEY0              	100.00%		F1SEX8              	100.00%
Bootstrap support for Q5JEY0 as seed ortholog is 100%.
Bootstrap support for F1SEX8 as seed ortholog is 100%.

Group of orthologs #50. Best score 263 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:197 S.scrofa:83

Q52428              	100.00%		F1S0D9              	100.00%
Bootstrap support for Q52428 as seed ortholog is 100%.
Bootstrap support for F1S0D9 as seed ortholog is 97%.

Group of orthologs #51. Best score 263 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:263 S.scrofa:120

Q5JHX1              	100.00%		F1RUG0              	100.00%
Bootstrap support for Q5JHX1 as seed ortholog is 100%.
Bootstrap support for F1RUG0 as seed ortholog is 99%.

Group of orthologs #52. Best score 263 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:263 S.scrofa:263

O59650              	100.00%		F1SEN2              	100.00%
Bootstrap support for O59650 as seed ortholog is 100%.
Bootstrap support for F1SEN2 as seed ortholog is 100%.

Group of orthologs #53. Best score 259 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:259 S.scrofa:259

Q5JGN0              	100.00%		F1RKS3              	100.00%
Bootstrap support for Q5JGN0 as seed ortholog is 100%.
Bootstrap support for F1RKS3 as seed ortholog is 100%.

Group of orthologs #54. Best score 255 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:255 S.scrofa:255

Q5JJE8              	100.00%		F1RZ24              	100.00%
Bootstrap support for Q5JJE8 as seed ortholog is 100%.
Bootstrap support for F1RZ24 as seed ortholog is 100%.

Group of orthologs #55. Best score 254 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:254 S.scrofa:254

Q5JGK6              	100.00%		F2Z505              	100.00%
Bootstrap support for Q5JGK6 as seed ortholog is 100%.
Bootstrap support for F2Z505 as seed ortholog is 100%.

Group of orthologs #56. Best score 247 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:247 S.scrofa:55

Q5JGC4              	100.00%		A5GFY8              	100.00%
Bootstrap support for Q5JGC4 as seed ortholog is 100%.
Bootstrap support for A5GFY8 as seed ortholog is 97%.

Group of orthologs #57. Best score 246 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:246 S.scrofa:246

Q5JI40              	100.00%		Q8MIQ9              	100.00%
                    	       		F1RQJ7              	79.85%
Bootstrap support for Q5JI40 as seed ortholog is 100%.
Bootstrap support for Q8MIQ9 as seed ortholog is 100%.

Group of orthologs #58. Best score 243 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:243 S.scrofa:243

Q5JHC6              	100.00%		F1SGS7              	100.00%
Bootstrap support for Q5JHC6 as seed ortholog is 100%.
Bootstrap support for F1SGS7 as seed ortholog is 100%.

Group of orthologs #59. Best score 240 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:240 S.scrofa:91

Q9HHC4              	100.00%		F1RL99              	100.00%
Bootstrap support for Q9HHC4 as seed ortholog is 100%.
Bootstrap support for F1RL99 as seed ortholog is 95%.

Group of orthologs #60. Best score 240 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:240 S.scrofa:240

Q5JF43              	100.00%		F1SD78              	100.00%
Bootstrap support for Q5JF43 as seed ortholog is 100%.
Bootstrap support for F1SD78 as seed ortholog is 100%.

Group of orthologs #61. Best score 235 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:235 S.scrofa:235

Q76KA8              	100.00%		F1SD97              	100.00%
Bootstrap support for Q76KA8 as seed ortholog is 100%.
Bootstrap support for F1SD97 as seed ortholog is 100%.

Group of orthologs #62. Best score 230 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:230 S.scrofa:230

P77933              	100.00%		F1RH32              	100.00%
Bootstrap support for P77933 as seed ortholog is 100%.
Bootstrap support for F1RH32 as seed ortholog is 100%.

Group of orthologs #63. Best score 230 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:230 S.scrofa:230

Q5JDJ5              	100.00%		F1SHY2              	100.00%
Bootstrap support for Q5JDJ5 as seed ortholog is 100%.
Bootstrap support for F1SHY2 as seed ortholog is 100%.

Group of orthologs #64. Best score 229 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:229 S.scrofa:157

Q5JEQ6              	100.00%		F1SNK3              	100.00%
Q5JJB8              	6.86%		
Bootstrap support for Q5JEQ6 as seed ortholog is 100%.
Bootstrap support for F1SNK3 as seed ortholog is 99%.

Group of orthologs #65. Best score 229 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:229 S.scrofa:154

Q5JFW3              	100.00%		F1SDP3              	100.00%
Bootstrap support for Q5JFW3 as seed ortholog is 100%.
Bootstrap support for F1SDP3 as seed ortholog is 99%.

Group of orthologs #66. Best score 226 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:226 S.scrofa:226

Q5JD37              	100.00%		P23687              	100.00%
Bootstrap support for Q5JD37 as seed ortholog is 100%.
Bootstrap support for P23687 as seed ortholog is 100%.

Group of orthologs #67. Best score 223 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:223 S.scrofa:25

Q5JJ64              	100.00%		F1SH33              	100.00%
                    	       		F1SH45              	13.50%
Bootstrap support for Q5JJ64 as seed ortholog is 100%.
Bootstrap support for F1SH33 as seed ortholog is 74%.
Alternative seed ortholog is F1SCE3 (25 bits away from this cluster)

Group of orthologs #68. Best score 223 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:223 S.scrofa:223

Q5JDH2              	100.00%		F2Z567              	100.00%
Bootstrap support for Q5JDH2 as seed ortholog is 100%.
Bootstrap support for F2Z567 as seed ortholog is 100%.

Group of orthologs #69. Best score 219 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:219 S.scrofa:219

Q5JF74              	100.00%		F1S754              	100.00%
Bootstrap support for Q5JF74 as seed ortholog is 100%.
Bootstrap support for F1S754 as seed ortholog is 100%.

Group of orthologs #70. Best score 218 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:171 S.scrofa:135

Q5JH24              	100.00%		F1RJE8              	100.00%
                    	       		I3LKR1              	11.42%
Bootstrap support for Q5JH24 as seed ortholog is 99%.
Bootstrap support for F1RJE8 as seed ortholog is 99%.

Group of orthologs #71. Best score 216 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:216 S.scrofa:152

Q5JCX7              	100.00%		F1RS27              	100.00%
                    	       		F1SMD7              	20.06%
                    	       		F1S6A2              	12.03%
Bootstrap support for Q5JCX7 as seed ortholog is 100%.
Bootstrap support for F1RS27 as seed ortholog is 100%.

Group of orthologs #72. Best score 216 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:216 S.scrofa:216

Q6F494              	100.00%		C5I4T6              	100.00%
                    	       		A5GFS4              	64.87%
Bootstrap support for Q6F494 as seed ortholog is 100%.
Bootstrap support for C5I4T6 as seed ortholog is 100%.

Group of orthologs #73. Best score 212 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:212 S.scrofa:42

Q5JG59              	100.00%		F1RUE3              	100.00%
                    	       		F1ST54              	5.68%
                    	       		F1S232              	5.34%
                    	       		F1SG41              	5.10%
Bootstrap support for Q5JG59 as seed ortholog is 100%.
Bootstrap support for F1RUE3 as seed ortholog is 82%.

Group of orthologs #74. Best score 212 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:212 S.scrofa:212

Q5JFN1              	100.00%		I3L5T3              	100.00%
                    	       		F1RR91              	54.55%
Bootstrap support for Q5JFN1 as seed ortholog is 100%.
Bootstrap support for I3L5T3 as seed ortholog is 100%.

Group of orthologs #75. Best score 212 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:127 S.scrofa:212

Q5JGQ7              	100.00%		F1RPB7              	100.00%
Bootstrap support for Q5JGQ7 as seed ortholog is 99%.
Bootstrap support for F1RPB7 as seed ortholog is 100%.

Group of orthologs #76. Best score 210 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:69 S.scrofa:210

Q5JGG2              	100.00%		F1S1A8              	100.00%
Bootstrap support for Q5JGG2 as seed ortholog is 94%.
Bootstrap support for F1S1A8 as seed ortholog is 100%.

Group of orthologs #77. Best score 210 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:210 S.scrofa:131

Q5JJ82              	100.00%		F1SUB2              	100.00%
Bootstrap support for Q5JJ82 as seed ortholog is 100%.
Bootstrap support for F1SUB2 as seed ortholog is 99%.

Group of orthologs #78. Best score 208 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:208 S.scrofa:208

Q5JH48              	100.00%		Q19QT7              	100.00%
Bootstrap support for Q5JH48 as seed ortholog is 100%.
Bootstrap support for Q19QT7 as seed ortholog is 100%.

Group of orthologs #79. Best score 206 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:206 S.scrofa:206

Q5JIM2              	100.00%		F1RGD9              	100.00%
                    	       		F1RGD8              	67.29%
Bootstrap support for Q5JIM2 as seed ortholog is 100%.
Bootstrap support for F1RGD9 as seed ortholog is 100%.

Group of orthologs #80. Best score 205 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:205 S.scrofa:100

Q5JEK8              	100.00%		F1RVY7              	100.00%
Bootstrap support for Q5JEK8 as seed ortholog is 100%.
Bootstrap support for F1RVY7 as seed ortholog is 99%.

Group of orthologs #81. Best score 202 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:202 S.scrofa:202

Q5JGV6              	100.00%		F1RVE2              	100.00%
Bootstrap support for Q5JGV6 as seed ortholog is 100%.
Bootstrap support for F1RVE2 as seed ortholog is 100%.

Group of orthologs #82. Best score 201 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:201 S.scrofa:201

Q5JGG5              	100.00%		I3LCS3              	100.00%
                    	       		I3LAB9              	27.37%
                    	       		I3LC59              	5.18%
Bootstrap support for Q5JGG5 as seed ortholog is 100%.
Bootstrap support for I3LCS3 as seed ortholog is 100%.

Group of orthologs #83. Best score 200 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:200 S.scrofa:200

Q5JID0              	100.00%		F1S763              	100.00%
                    	       		F1SAN3              	31.47%
                    	       		F1SNA0              	31.14%
                    	       		F1SHF9              	25.78%
                    	       		F1SK41              	25.45%
                    	       		F1RM08              	16.41%
Bootstrap support for Q5JID0 as seed ortholog is 100%.
Bootstrap support for F1S763 as seed ortholog is 100%.

Group of orthologs #84. Best score 200 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:200 S.scrofa:200

Q5JIG7              	100.00%		Q6RI85              	100.00%
                    	       		Q7SIB7              	85.62%
Bootstrap support for Q5JIG7 as seed ortholog is 100%.
Bootstrap support for Q6RI85 as seed ortholog is 100%.

Group of orthologs #85. Best score 199 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:199 S.scrofa:137

Q5JGF4              	100.00%		I3LJ02              	100.00%
                    	       		I3LJI6              	91.78%
Bootstrap support for Q5JGF4 as seed ortholog is 100%.
Bootstrap support for I3LJ02 as seed ortholog is 99%.

Group of orthologs #86. Best score 198 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:198 S.scrofa:64

Q5JEW1              	100.00%		F1SND2              	100.00%
Q5JGG6              	14.51%		F1S421              	7.41%
Bootstrap support for Q5JEW1 as seed ortholog is 100%.
Bootstrap support for F1SND2 as seed ortholog is 91%.

Group of orthologs #87. Best score 197 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:197 S.scrofa:77

Q5JFN0              	100.00%		F1S895              	100.00%
                    	       		I3LB64              	100.00%
                    	       		I3LDD2              	13.14%
Bootstrap support for Q5JFN0 as seed ortholog is 100%.
Bootstrap support for F1S895 as seed ortholog is 98%.
Bootstrap support for I3LB64 as seed ortholog is 98%.

Group of orthologs #88. Best score 197 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:197 S.scrofa:3

Q5JEZ2              	100.00%		F1ST73              	100.00%
Q5JF48              	13.36%		
Bootstrap support for Q5JEZ2 as seed ortholog is 100%.
Bootstrap support for F1ST73 as seed ortholog is 53%.
Alternative seed ortholog is F1RZA1 (3 bits away from this cluster)

Group of orthologs #89. Best score 194 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:194 S.scrofa:15

Q5JIU9              	100.00%		F1SBA5              	100.00%
                    	       		I3LVJ7              	48.30%
Bootstrap support for Q5JIU9 as seed ortholog is 100%.
Bootstrap support for F1SBA5 as seed ortholog is 59%.
Alternative seed ortholog is F2Z5K2 (15 bits away from this cluster)

Group of orthologs #90. Best score 191 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:191 S.scrofa:57

Q5JE76              	100.00%		F1RST8              	100.00%
                    	       		F1S7T6              	33.54%
                    	       		I3LS61              	8.54%
                    	       		I3LL27              	6.53%
                    	       		F1SMW4              	5.78%
Bootstrap support for Q5JE76 as seed ortholog is 100%.
Bootstrap support for F1RST8 as seed ortholog is 95%.

Group of orthologs #91. Best score 190 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:190 S.scrofa:190

Q5JFE7              	100.00%		F1S569              	100.00%
Bootstrap support for Q5JFE7 as seed ortholog is 100%.
Bootstrap support for F1S569 as seed ortholog is 100%.

Group of orthologs #92. Best score 186 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:186 S.scrofa:103

Q5JIQ0              	100.00%		F1S564              	100.00%
Bootstrap support for Q5JIQ0 as seed ortholog is 100%.
Bootstrap support for F1S564 as seed ortholog is 99%.

Group of orthologs #93. Best score 185 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:185 S.scrofa:185

Q5JE24              	100.00%		F1RL05              	100.00%
Q6F598              	5.41%		
Bootstrap support for Q5JE24 as seed ortholog is 100%.
Bootstrap support for F1RL05 as seed ortholog is 100%.

Group of orthologs #94. Best score 184 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:184 S.scrofa:78

Q5JIR6              	100.00%		F1RSL0              	100.00%
Bootstrap support for Q5JIR6 as seed ortholog is 100%.
Bootstrap support for F1RSL0 as seed ortholog is 99%.

Group of orthologs #95. Best score 180 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:180 S.scrofa:180

Q5JH43              	100.00%		I3LK33              	100.00%
                    	       		P79324              	56.80%
                    	       		I3LS62              	30.00%
                    	       		I3L623              	26.00%
Bootstrap support for Q5JH43 as seed ortholog is 100%.
Bootstrap support for I3LK33 as seed ortholog is 100%.

Group of orthologs #96. Best score 180 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:129 S.scrofa:77

Q5JF51              	100.00%		F1S4D5              	100.00%
Q5JHU0              	27.97%		F1RR62              	39.43%
Bootstrap support for Q5JF51 as seed ortholog is 99%.
Bootstrap support for F1S4D5 as seed ortholog is 96%.

Group of orthologs #97. Best score 180 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:180 S.scrofa:180

Q5JFM8              	100.00%		F1RIZ5              	100.00%
Bootstrap support for Q5JFM8 as seed ortholog is 100%.
Bootstrap support for F1RIZ5 as seed ortholog is 100%.

Group of orthologs #98. Best score 179 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:80 S.scrofa:179

Q5JDD8              	100.00%		I3LTH4              	100.00%
                    	       		I3LI48              	49.37%
                    	       		F1RG29              	20.59%
Bootstrap support for Q5JDD8 as seed ortholog is 99%.
Bootstrap support for I3LTH4 as seed ortholog is 100%.

Group of orthologs #99. Best score 178 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:178 S.scrofa:113

Q5JF38              	100.00%		D2KPI8              	100.00%
Bootstrap support for Q5JF38 as seed ortholog is 100%.
Bootstrap support for D2KPI8 as seed ortholog is 99%.

Group of orthologs #100. Best score 178 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:178 S.scrofa:178

Q5JG03              	100.00%		F1RS52              	100.00%
Bootstrap support for Q5JG03 as seed ortholog is 100%.
Bootstrap support for F1RS52 as seed ortholog is 100%.

Group of orthologs #101. Best score 176 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:176 S.scrofa:90

Q5JGS4              	100.00%		F1SIH5              	100.00%
Bootstrap support for Q5JGS4 as seed ortholog is 100%.
Bootstrap support for F1SIH5 as seed ortholog is 99%.

Group of orthologs #102. Best score 176 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:176 S.scrofa:176

Q76KA7              	100.00%		F1SR70              	100.00%
Bootstrap support for Q76KA7 as seed ortholog is 100%.
Bootstrap support for F1SR70 as seed ortholog is 100%.

Group of orthologs #103. Best score 175 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:175 S.scrofa:175

Q5JHT1              	100.00%		F1RPW8              	100.00%
Bootstrap support for Q5JHT1 as seed ortholog is 100%.
Bootstrap support for F1RPW8 as seed ortholog is 100%.

Group of orthologs #104. Best score 172 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:172 S.scrofa:172

Q5JF06              	100.00%		F1SL74              	100.00%
Bootstrap support for Q5JF06 as seed ortholog is 100%.
Bootstrap support for F1SL74 as seed ortholog is 100%.

Group of orthologs #105. Best score 172 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:172 S.scrofa:172

Q5JEP5              	100.00%		F1SU52              	100.00%
Bootstrap support for Q5JEP5 as seed ortholog is 100%.
Bootstrap support for F1SU52 as seed ortholog is 100%.

Group of orthologs #106. Best score 172 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:172 S.scrofa:172

Q5JGD1              	100.00%		I3LSP1              	100.00%
Bootstrap support for Q5JGD1 as seed ortholog is 100%.
Bootstrap support for I3LSP1 as seed ortholog is 100%.

Group of orthologs #107. Best score 169 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:169 S.scrofa:169

Q5JIL7              	100.00%		F1RQT7              	100.00%
                    	       		F1S431              	32.44%
Bootstrap support for Q5JIL7 as seed ortholog is 100%.
Bootstrap support for F1RQT7 as seed ortholog is 100%.

Group of orthologs #108. Best score 169 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:169 S.scrofa:109

Q5JGN1              	100.00%		F2Z5J6              	100.00%
P58109              	58.03%		
Bootstrap support for Q5JGN1 as seed ortholog is 100%.
Bootstrap support for F2Z5J6 as seed ortholog is 99%.

Group of orthologs #109. Best score 168 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:168 S.scrofa:104

Q5JFW9              	100.00%		I3L954              	100.00%
                    	       		I3LCX0              	66.52%
                    	       		A8U4R4              	61.74%
Bootstrap support for Q5JFW9 as seed ortholog is 100%.
Bootstrap support for I3L954 as seed ortholog is 99%.

Group of orthologs #110. Best score 168 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:56 S.scrofa:168

Q5JEW7              	100.00%		F1RWA0              	100.00%
Bootstrap support for Q5JEW7 as seed ortholog is 91%.
Bootstrap support for F1RWA0 as seed ortholog is 100%.

Group of orthologs #111. Best score 167 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:167 S.scrofa:167

Q5JHS7              	100.00%		F1RNT7              	100.00%
Bootstrap support for Q5JHS7 as seed ortholog is 100%.
Bootstrap support for F1RNT7 as seed ortholog is 100%.

Group of orthologs #112. Best score 165 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 S.scrofa:64

Q5JI97              	100.00%		P0C5I2              	100.00%
                    	       		I3LUP1              	6.77%
Bootstrap support for Q5JI97 as seed ortholog is 90%.
Bootstrap support for P0C5I2 as seed ortholog is 94%.

Group of orthologs #113. Best score 164 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:164 S.scrofa:164

Q5JIE6              	100.00%		A4Z6H0              	100.00%
                    	       		A4Z6H1              	70.94%
                    	       		I3L878              	35.08%
Bootstrap support for Q5JIE6 as seed ortholog is 100%.
Bootstrap support for A4Z6H0 as seed ortholog is 100%.

Group of orthologs #114. Best score 163 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:163 S.scrofa:163

Q5JF26              	100.00%		F1SA44              	100.00%
Q5JGM9              	19.22%		
Bootstrap support for Q5JF26 as seed ortholog is 100%.
Bootstrap support for F1SA44 as seed ortholog is 100%.

Group of orthologs #115. Best score 163 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:163 S.scrofa:163

Q5JH26              	100.00%		A2TLM1              	100.00%
Bootstrap support for Q5JH26 as seed ortholog is 100%.
Bootstrap support for A2TLM1 as seed ortholog is 100%.

Group of orthologs #116. Best score 163 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:163 S.scrofa:163

Q5JDI0              	100.00%		F1SJJ5              	100.00%
Bootstrap support for Q5JDI0 as seed ortholog is 100%.
Bootstrap support for F1SJJ5 as seed ortholog is 100%.

Group of orthologs #117. Best score 163 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:26 S.scrofa:15

Q5JIE4              	100.00%		F1SU22              	100.00%
Bootstrap support for Q5JIE4 as seed ortholog is 76%.
Bootstrap support for F1SU22 as seed ortholog is 66%.
Alternative seed ortholog is F1RP60 (15 bits away from this cluster)

Group of orthologs #118. Best score 163 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:163 S.scrofa:163

Q5JI54              	100.00%		I3LLW6              	100.00%
Bootstrap support for Q5JI54 as seed ortholog is 100%.
Bootstrap support for I3LLW6 as seed ortholog is 100%.

Group of orthologs #119. Best score 161 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:161 S.scrofa:161

Q5JFG9              	100.00%		I3LPB8              	100.00%
Bootstrap support for Q5JFG9 as seed ortholog is 100%.
Bootstrap support for I3LPB8 as seed ortholog is 100%.

Group of orthologs #120. Best score 161 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:161 S.scrofa:161

Q5JJG1              	100.00%		Q29205              	100.00%
Bootstrap support for Q5JJG1 as seed ortholog is 100%.
Bootstrap support for Q29205 as seed ortholog is 100%.

Group of orthologs #121. Best score 160 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:160 S.scrofa:81

Q5JEZ9              	100.00%		A5D9J7              	100.00%
                    	       		I3LED8              	23.73%
                    	       		A5D9J3              	20.20%
                    	       		I3LMV8              	13.78%
                    	       		F1RG41              	10.88%
Bootstrap support for Q5JEZ9 as seed ortholog is 100%.
Bootstrap support for A5D9J7 as seed ortholog is 95%.

Group of orthologs #122. Best score 160 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:160 S.scrofa:160

Q5JFX8              	100.00%		Q0QF01              	100.00%
                    	       		I3LS54              	81.14%
Bootstrap support for Q5JFX8 as seed ortholog is 100%.
Bootstrap support for Q0QF01 as seed ortholog is 100%.

Group of orthologs #123. Best score 160 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:83 S.scrofa:8

Q5JE21              	100.00%		F1S3D1              	100.00%
Bootstrap support for Q5JE21 as seed ortholog is 97%.
Bootstrap support for F1S3D1 as seed ortholog is 56%.
Alternative seed ortholog is F1RP04 (8 bits away from this cluster)

Group of orthologs #124. Best score 160 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:160 S.scrofa:160

Q5JDB6              	100.00%		F1SGY7              	100.00%
Bootstrap support for Q5JDB6 as seed ortholog is 100%.
Bootstrap support for F1SGY7 as seed ortholog is 100%.

Group of orthologs #125. Best score 160 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:160 S.scrofa:160

Q5JGX5              	100.00%		F1SMN8              	100.00%
Bootstrap support for Q5JGX5 as seed ortholog is 100%.
Bootstrap support for F1SMN8 as seed ortholog is 100%.

Group of orthologs #126. Best score 157 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:157 S.scrofa:157

Q5JJD2              	100.00%		Q4GWZ2              	100.00%
                    	       		F1SJR1              	63.68%
                    	       		F1S1E3              	48.21%
                    	       		I3LIK7              	29.15%
                    	       		I3L6M5              	22.42%
Bootstrap support for Q5JJD2 as seed ortholog is 100%.
Bootstrap support for Q4GWZ2 as seed ortholog is 100%.

Group of orthologs #127. Best score 156 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:156 S.scrofa:156

Q5JE20              	100.00%		Q6SA96              	100.00%
                    	       		F2Z512              	97.81%
Bootstrap support for Q5JE20 as seed ortholog is 100%.
Bootstrap support for Q6SA96 as seed ortholog is 100%.

Group of orthologs #128. Best score 155 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:155 S.scrofa:18

Q5JIB3              	100.00%		F1SD98              	100.00%
                    	       		I3LQ55              	40.75%
Bootstrap support for Q5JIB3 as seed ortholog is 100%.
Bootstrap support for F1SD98 as seed ortholog is 61%.
Alternative seed ortholog is I3LG35 (18 bits away from this cluster)

Group of orthologs #129. Best score 154 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:154 S.scrofa:154

Q5JDV2              	100.00%		F1SJJ3              	100.00%
Q5JDT7              	5.36%		F1S5B1              	20.48%
                    	       		F1RSR6              	11.54%
Bootstrap support for Q5JDV2 as seed ortholog is 100%.
Bootstrap support for F1SJJ3 as seed ortholog is 100%.

Group of orthologs #130. Best score 154 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:154 S.scrofa:154

Q5JFR0              	100.00%		I3LK75              	100.00%
                    	       		I3LTJ9              	87.93%
Bootstrap support for Q5JFR0 as seed ortholog is 100%.
Bootstrap support for I3LK75 as seed ortholog is 100%.

Group of orthologs #131. Best score 154 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:154 S.scrofa:45

Q5JDG3              	100.00%		I3LIR4              	100.00%
Bootstrap support for Q5JDG3 as seed ortholog is 100%.
Bootstrap support for I3LIR4 as seed ortholog is 84%.

Group of orthologs #132. Best score 153 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:153 S.scrofa:153

Q5JE04              	100.00%		F2Z5E6              	100.00%
Bootstrap support for Q5JE04 as seed ortholog is 100%.
Bootstrap support for F2Z5E6 as seed ortholog is 100%.

Group of orthologs #133. Best score 150 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:150 S.scrofa:150

Q5JJG0              	100.00%		F1RQ91              	100.00%
                    	       		F1SNP4              	25.84%
Bootstrap support for Q5JJG0 as seed ortholog is 100%.
Bootstrap support for F1RQ91 as seed ortholog is 100%.

Group of orthologs #134. Best score 148 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:148 S.scrofa:81

Q5JGR7              	100.00%		Q2EN76              	100.00%
                    	       		F6PVJ7              	81.10%
                    	       		F1RG17              	45.12%
                    	       		F1RGV5              	23.17%
Bootstrap support for Q5JGR7 as seed ortholog is 100%.
Bootstrap support for Q2EN76 as seed ortholog is 99%.

Group of orthologs #135. Best score 148 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:148 S.scrofa:5

Q5JIR7              	100.00%		F1S1T6              	100.00%
Bootstrap support for Q5JIR7 as seed ortholog is 100%.
Bootstrap support for F1S1T6 as seed ortholog is 40%.
Alternative seed ortholog is K7GN91 (5 bits away from this cluster)

Group of orthologs #136. Best score 148 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:148 S.scrofa:148

Q5JIB9              	100.00%		F2Z5N9              	100.00%
Bootstrap support for Q5JIB9 as seed ortholog is 100%.
Bootstrap support for F2Z5N9 as seed ortholog is 100%.

Group of orthologs #137. Best score 147 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:147 S.scrofa:147

Q5JGH7              	100.00%		F1S0G2              	100.00%
Bootstrap support for Q5JGH7 as seed ortholog is 100%.
Bootstrap support for F1S0G2 as seed ortholog is 100%.

Group of orthologs #138. Best score 146 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:27 S.scrofa:146

Q5JES4              	100.00%		A5GFZ5              	100.00%
Bootstrap support for Q5JES4 as seed ortholog is 79%.
Bootstrap support for A5GFZ5 as seed ortholog is 100%.

Group of orthologs #139. Best score 146 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:146 S.scrofa:146

Q5JDV1              	100.00%		F1S3U0              	100.00%
Bootstrap support for Q5JDV1 as seed ortholog is 100%.
Bootstrap support for F1S3U0 as seed ortholog is 100%.

Group of orthologs #140. Best score 146 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:146 S.scrofa:146

Q5JGE1              	100.00%		F1STT4              	100.00%
Bootstrap support for Q5JGE1 as seed ortholog is 100%.
Bootstrap support for F1STT4 as seed ortholog is 100%.

Group of orthologs #141. Best score 145 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:145 S.scrofa:145

Q5JDV8              	100.00%		F1RP87              	100.00%
Q5JIM8              	13.95%		
Bootstrap support for Q5JDV8 as seed ortholog is 100%.
Bootstrap support for F1RP87 as seed ortholog is 100%.

Group of orthologs #142. Best score 145 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:145 S.scrofa:145

Q5JDH3              	100.00%		P62844              	100.00%
Bootstrap support for Q5JDH3 as seed ortholog is 100%.
Bootstrap support for P62844 as seed ortholog is 100%.

Group of orthologs #143. Best score 144 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:144 S.scrofa:144

Q5JFV8              	100.00%		F1S297              	100.00%
                    	       		I3L8X0              	25.75%
Bootstrap support for Q5JFV8 as seed ortholog is 100%.
Bootstrap support for F1S297 as seed ortholog is 100%.

Group of orthologs #144. Best score 144 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:144 S.scrofa:31

Q5JFG2              	100.00%		F1S6H4              	100.00%
Q5JFG7              	54.57%		
Bootstrap support for Q5JFG2 as seed ortholog is 100%.
Bootstrap support for F1S6H4 as seed ortholog is 62%.
Alternative seed ortholog is F1S430 (31 bits away from this cluster)

Group of orthologs #145. Best score 144 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:144 S.scrofa:144

Q5JFL7              	100.00%		I3L712              	100.00%
Bootstrap support for Q5JFL7 as seed ortholog is 100%.
Bootstrap support for I3L712 as seed ortholog is 100%.

Group of orthologs #146. Best score 143 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:143 S.scrofa:67

Q5JEX2              	100.00%		A5GFZ6              	100.00%
Bootstrap support for Q5JEX2 as seed ortholog is 100%.
Bootstrap support for A5GFZ6 as seed ortholog is 98%.

Group of orthologs #147. Best score 141 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 S.scrofa:141

Q5JDP5              	100.00%		F1RKB6              	100.00%
Q5JDB4              	8.45%		
Q5JI15              	6.08%		
Bootstrap support for Q5JDP5 as seed ortholog is 90%.
Bootstrap support for F1RKB6 as seed ortholog is 100%.

Group of orthologs #148. Best score 139 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:139 S.scrofa:139

Q5JIF4              	100.00%		F2Z5J4              	100.00%
Bootstrap support for Q5JIF4 as seed ortholog is 100%.
Bootstrap support for F2Z5J4 as seed ortholog is 100%.

Group of orthologs #149. Best score 139 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:139 S.scrofa:139

Q5JJG4              	100.00%		I3LP78              	100.00%
Bootstrap support for Q5JJG4 as seed ortholog is 100%.
Bootstrap support for I3LP78 as seed ortholog is 100%.

Group of orthologs #150. Best score 139 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:139 S.scrofa:72

Q5JH36              	100.00%		Q29214              	100.00%
Bootstrap support for Q5JH36 as seed ortholog is 100%.
Bootstrap support for Q29214 as seed ortholog is 99%.

Group of orthologs #151. Best score 138 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:138 S.scrofa:138

Q5JF63              	100.00%		I3L5T8              	100.00%
Bootstrap support for Q5JF63 as seed ortholog is 100%.
Bootstrap support for I3L5T8 as seed ortholog is 100%.

Group of orthologs #152. Best score 138 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:138 S.scrofa:138

Q5JDH5              	100.00%		Q0Z8U2              	100.00%
Bootstrap support for Q5JDH5 as seed ortholog is 100%.
Bootstrap support for Q0Z8U2 as seed ortholog is 100%.

Group of orthologs #153. Best score 137 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:137 S.scrofa:41

Q5JH68              	100.00%		F1SK45              	100.00%
                    	       		I3LSI3              	5.94%
Bootstrap support for Q5JH68 as seed ortholog is 100%.
Bootstrap support for F1SK45 as seed ortholog is 89%.

Group of orthologs #154. Best score 136 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:136 S.scrofa:136

Q5JJF8              	100.00%		P62831              	100.00%
Bootstrap support for Q5JJF8 as seed ortholog is 100%.
Bootstrap support for P62831 as seed ortholog is 100%.

Group of orthologs #155. Best score 135 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:29 S.scrofa:68

Q5JIG9              	100.00%		I3L9I3              	100.00%
Q5JDD3              	100.00%		I3LKH9              	100.00%
Q5JCX0              	19.96%		K7GNJ3              	7.19%
Q5JG70              	17.27%		
Q5JGV1              	16.63%		
Q5JIN8              	15.85%		
Q5JIB0              	14.68%		
Q5JDQ2              	14.48%		
Q5JG38              	14.09%		
Q5JFR9              	9.02%		
Q5JDA7              	8.41%		
Q5JIG1              	5.09%		
Bootstrap support for Q5JIG9 as seed ortholog is 85%.
Bootstrap support for Q5JDD3 as seed ortholog is 63%.
Alternative seed ortholog is Q5JEB0 (29 bits away from this cluster)
Bootstrap support for I3L9I3 as seed ortholog is 98%.
Bootstrap support for I3LKH9 as seed ortholog is 91%.

Group of orthologs #156. Best score 135 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:135 S.scrofa:135

Q5JJG6              	100.00%		F2Z546              	100.00%
                    	       		F1SB89              	62.30%
Bootstrap support for Q5JJG6 as seed ortholog is 100%.
Bootstrap support for F2Z546 as seed ortholog is 100%.

Group of orthologs #157. Best score 134 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:134 S.scrofa:134

Q5JHP2              	100.00%		F1RSR4              	100.00%
Bootstrap support for Q5JHP2 as seed ortholog is 100%.
Bootstrap support for F1RSR4 as seed ortholog is 100%.

Group of orthologs #158. Best score 134 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:55 S.scrofa:37

Q5JHE3              	100.00%		Q8WNV7              	100.00%
Bootstrap support for Q5JHE3 as seed ortholog is 95%.
Bootstrap support for Q8WNV7 as seed ortholog is 88%.

Group of orthologs #159. Best score 133 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:133 S.scrofa:133

Q5JF27              	100.00%		I3LSQ7              	100.00%
Q5JFZ0              	9.66%		
Bootstrap support for Q5JF27 as seed ortholog is 100%.
Bootstrap support for I3LSQ7 as seed ortholog is 100%.

Group of orthologs #160. Best score 133 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:133 S.scrofa:133

Q5JJF1              	100.00%		P62272              	100.00%
Bootstrap support for Q5JJF1 as seed ortholog is 100%.
Bootstrap support for P62272 as seed ortholog is 100%.

Group of orthologs #161. Best score 132 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:132 S.scrofa:36

Q5JFK1              	100.00%		F1S762              	100.00%
Bootstrap support for Q5JFK1 as seed ortholog is 100%.
Bootstrap support for F1S762 as seed ortholog is 95%.

Group of orthologs #162. Best score 132 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:80 S.scrofa:24

Q5JF30              	100.00%		Q9TSX9              	100.00%
Bootstrap support for Q5JF30 as seed ortholog is 99%.
Bootstrap support for Q9TSX9 as seed ortholog is 80%.

Group of orthologs #163. Best score 131 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:131 S.scrofa:45

Q5JFI2              	100.00%		F1S1J4              	100.00%
                    	       		I3LM52              	56.89%
                    	       		F1RXT2              	9.52%
                    	       		I3LKB5              	5.85%
Bootstrap support for Q5JFI2 as seed ortholog is 100%.
Bootstrap support for F1S1J4 as seed ortholog is 88%.

Group of orthologs #164. Best score 131 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:131 S.scrofa:131

Q5JDR5              	100.00%		I3LFR7              	100.00%
                    	       		I3LBY7              	64.86%
                    	       		P22412              	30.34%
Bootstrap support for Q5JDR5 as seed ortholog is 100%.
Bootstrap support for I3LFR7 as seed ortholog is 100%.

Group of orthologs #165. Best score 131 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:131 S.scrofa:76

Q5JIE9              	100.00%		B8XSJ9              	100.00%
Bootstrap support for Q5JIE9 as seed ortholog is 100%.
Bootstrap support for B8XSJ9 as seed ortholog is 98%.

Group of orthologs #166. Best score 131 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:131 S.scrofa:131

Q5JJC6              	100.00%		F1RIS8              	100.00%
Bootstrap support for Q5JJC6 as seed ortholog is 100%.
Bootstrap support for F1RIS8 as seed ortholog is 100%.

Group of orthologs #167. Best score 131 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:131 S.scrofa:131

Q5JDI4              	100.00%		F1SHW5              	100.00%
Bootstrap support for Q5JDI4 as seed ortholog is 100%.
Bootstrap support for F1SHW5 as seed ortholog is 100%.

Group of orthologs #168. Best score 131 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:31 S.scrofa:63

Q5JFS0              	100.00%		F1SUU6              	100.00%
Bootstrap support for Q5JFS0 as seed ortholog is 79%.
Bootstrap support for F1SUU6 as seed ortholog is 94%.

Group of orthologs #169. Best score 130 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 S.scrofa:130

Q5JGC8              	100.00%		F1SP18              	100.00%
                    	       		F1RZ96              	71.52%
                    	       		I3LDF6              	52.03%
Bootstrap support for Q5JGC8 as seed ortholog is 94%.
Bootstrap support for F1SP18 as seed ortholog is 100%.

Group of orthologs #170. Best score 128 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:128 S.scrofa:128

Q5JEM6              	100.00%		F1SFG2              	100.00%
                    	       		I7GF95              	5.62%
Bootstrap support for Q5JEM6 as seed ortholog is 100%.
Bootstrap support for F1SFG2 as seed ortholog is 100%.

Group of orthologs #171. Best score 128 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:128 S.scrofa:128

Q5JEZ6              	100.00%		F1SBF6              	100.00%
Bootstrap support for Q5JEZ6 as seed ortholog is 100%.
Bootstrap support for F1SBF6 as seed ortholog is 100%.

Group of orthologs #172. Best score 128 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:128 S.scrofa:128

Q5JE70              	100.00%		I3LGH2              	100.00%
Bootstrap support for Q5JE70 as seed ortholog is 100%.
Bootstrap support for I3LGH2 as seed ortholog is 100%.

Group of orthologs #173. Best score 126 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:126 S.scrofa:126

Q5JDI9              	100.00%		F1RR63              	100.00%
Bootstrap support for Q5JDI9 as seed ortholog is 100%.
Bootstrap support for F1RR63 as seed ortholog is 100%.

Group of orthologs #174. Best score 125 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:125 S.scrofa:22

Q5JF69              	100.00%		F1SC09              	100.00%
                    	       		F1SBY9              	50.30%
                    	       		I3LV60              	48.96%
                    	       		F1SBZ0              	40.37%
                    	       		F1S1W2              	38.99%
Bootstrap support for Q5JF69 as seed ortholog is 100%.
Bootstrap support for F1SC09 as seed ortholog is 75%.

Group of orthologs #175. Best score 125 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:125 S.scrofa:73

Q5JG15              	100.00%		F1S2W4              	100.00%
Bootstrap support for Q5JG15 as seed ortholog is 100%.
Bootstrap support for F1S2W4 as seed ortholog is 99%.

Group of orthologs #176. Best score 124 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:124 S.scrofa:58

Q5JI09              	100.00%		P80276              	100.00%
                    	       		P82125              	52.07%
                    	       		Q2TJA5              	39.10%
                    	       		P50578              	38.91%
                    	       		F1RYV6              	32.89%
                    	       		F1RYU4              	31.58%
                    	       		F1RYV5              	24.81%
                    	       		F1SNJ5              	12.03%
Bootstrap support for Q5JI09 as seed ortholog is 100%.
Bootstrap support for P80276 as seed ortholog is 82%.

Group of orthologs #177. Best score 124 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:124 S.scrofa:29

Q5JHU9              	100.00%		Q9TDR1              	100.00%
Q5JGJ2              	15.32%		
Q5JGJ3              	7.95%		
Q5JDL7              	6.45%		
Bootstrap support for Q5JHU9 as seed ortholog is 100%.
Bootstrap support for Q9TDR1 as seed ortholog is 77%.

Group of orthologs #178. Best score 124 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 S.scrofa:124

Q5JGT2              	100.00%		F1SQU5              	100.00%
Q5JI45              	38.63%		
Bootstrap support for Q5JGT2 as seed ortholog is 89%.
Bootstrap support for F1SQU5 as seed ortholog is 100%.

Group of orthologs #179. Best score 124 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:124 S.scrofa:43

Q5JJ45              	100.00%		F1RFA5              	100.00%
Bootstrap support for Q5JJ45 as seed ortholog is 100%.
Bootstrap support for F1RFA5 as seed ortholog is 89%.

Group of orthologs #180. Best score 124 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:124 S.scrofa:124

Q5JGI1              	100.00%		I3LIM2              	100.00%
Bootstrap support for Q5JGI1 as seed ortholog is 100%.
Bootstrap support for I3LIM2 as seed ortholog is 100%.

Group of orthologs #181. Best score 123 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:123 S.scrofa:123

Q5JDB8              	100.00%		F1S227              	100.00%
Bootstrap support for Q5JDB8 as seed ortholog is 100%.
Bootstrap support for F1S227 as seed ortholog is 100%.

Group of orthologs #182. Best score 123 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:9 S.scrofa:123

Q5JGG0              	100.00%		I3LHL4              	100.00%
Bootstrap support for Q5JGG0 as seed ortholog is 65%.
Alternative seed ortholog is Q5JHU7 (9 bits away from this cluster)
Bootstrap support for I3LHL4 as seed ortholog is 100%.

Group of orthologs #183. Best score 122 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:122 S.scrofa:122

O52958              	100.00%		F1SG10              	100.00%
                    	       		F2Z572              	96.61%
                    	       		F1RWP0              	28.29%
                    	       		F1SB18              	28.09%
Bootstrap support for O52958 as seed ortholog is 100%.
Bootstrap support for F1SG10 as seed ortholog is 100%.

Group of orthologs #184. Best score 121 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:121 S.scrofa:121

Q5JI34              	100.00%		Q9GKE7              	100.00%
                    	       		F1RIY2              	76.19%
                    	       		I3LMX7              	10.43%
                    	       		F1RG09              	10.29%
                    	       		F1RF80              	9.50%
                    	       		F1SRV8              	8.06%
Bootstrap support for Q5JI34 as seed ortholog is 100%.
Bootstrap support for Q9GKE7 as seed ortholog is 100%.

Group of orthologs #185. Best score 121 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:121 S.scrofa:121

Q5JIA2              	100.00%		D0G0C6              	100.00%
Bootstrap support for Q5JIA2 as seed ortholog is 100%.
Bootstrap support for D0G0C6 as seed ortholog is 100%.

Group of orthologs #186. Best score 121 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:121 S.scrofa:121

Q5JIP8              	100.00%		F1RTZ1              	100.00%
Bootstrap support for Q5JIP8 as seed ortholog is 100%.
Bootstrap support for F1RTZ1 as seed ortholog is 100%.

Group of orthologs #187. Best score 121 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:121 S.scrofa:121

O74035              	100.00%		F1SDX8              	100.00%
Bootstrap support for O74035 as seed ortholog is 100%.
Bootstrap support for F1SDX8 as seed ortholog is 100%.

Group of orthologs #188. Best score 120 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:120 S.scrofa:120

Q5JIQ1              	100.00%		F1SM98              	100.00%
Bootstrap support for Q5JIQ1 as seed ortholog is 100%.
Bootstrap support for F1SM98 as seed ortholog is 100%.

Group of orthologs #189. Best score 119 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:75 S.scrofa:70

Q5JIH2              	100.00%		F1S270              	100.00%
                    	       		I3LTT3              	34.96%
                    	       		I3LSC3              	15.28%
                    	       		F1SN56              	6.83%
Bootstrap support for Q5JIH2 as seed ortholog is 98%.
Bootstrap support for F1S270 as seed ortholog is 98%.

Group of orthologs #190. Best score 119 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:119 S.scrofa:119

Q52366              	100.00%		I3L7Z5              	100.00%
                    	       		F1SSN6              	49.65%
Bootstrap support for Q52366 as seed ortholog is 100%.
Bootstrap support for I3L7Z5 as seed ortholog is 100%.

Group of orthologs #191. Best score 119 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:119 S.scrofa:119

Q5JET2              	100.00%		F1RXE3              	100.00%
Bootstrap support for Q5JET2 as seed ortholog is 100%.
Bootstrap support for F1RXE3 as seed ortholog is 100%.

Group of orthologs #192. Best score 118 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:118 S.scrofa:118

Q5JH18              	100.00%		F1RQQ8              	100.00%
                    	       		F1SFF8              	81.45%
                    	       		F1RQQ7              	69.37%
Bootstrap support for Q5JH18 as seed ortholog is 100%.
Bootstrap support for F1RQQ8 as seed ortholog is 100%.

Group of orthologs #193. Best score 118 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:118 S.scrofa:118

Q5JD70              	100.00%		I3L8T3              	100.00%
Q5JHN7              	6.51%		
Bootstrap support for Q5JD70 as seed ortholog is 100%.
Bootstrap support for I3L8T3 as seed ortholog is 100%.

Group of orthologs #194. Best score 118 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:60 S.scrofa:12

Q5JIX4              	100.00%		Q9XT00              	100.00%
Bootstrap support for Q5JIX4 as seed ortholog is 97%.
Bootstrap support for Q9XT00 as seed ortholog is 50%.
Alternative seed ortholog is I3LHC8 (12 bits away from this cluster)

Group of orthologs #195. Best score 117 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:117 S.scrofa:117

Q5JJG8              	100.00%		I3LJ87              	100.00%
                    	       		F1S275              	67.57%
Bootstrap support for Q5JJG8 as seed ortholog is 100%.
Bootstrap support for I3LJ87 as seed ortholog is 100%.

Group of orthologs #196. Best score 115 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:115 S.scrofa:115

Q5JJF9              	100.00%		I3L7Y1              	100.00%
                    	       		F2Z5N5              	98.29%
                    	       		I3LHP3              	50.29%
Bootstrap support for Q5JJF9 as seed ortholog is 100%.
Bootstrap support for I3L7Y1 as seed ortholog is 100%.

Group of orthologs #197. Best score 115 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:27 S.scrofa:115

Q5JFN5              	100.00%		F1RTV5              	100.00%
Bootstrap support for Q5JFN5 as seed ortholog is 80%.
Bootstrap support for F1RTV5 as seed ortholog is 100%.

Group of orthologs #198. Best score 115 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:115 S.scrofa:45

Q76CZ2              	100.00%		F1RTW8              	100.00%
Bootstrap support for Q76CZ2 as seed ortholog is 100%.
Bootstrap support for F1RTW8 as seed ortholog is 93%.

Group of orthologs #199. Best score 115 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:115 S.scrofa:115

Q5JDP7              	100.00%		I3LFW4              	100.00%
Bootstrap support for Q5JDP7 as seed ortholog is 100%.
Bootstrap support for I3LFW4 as seed ortholog is 100%.

Group of orthologs #200. Best score 114 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:114 S.scrofa:114

Q5JE74              	100.00%		F1RFB3              	100.00%
Bootstrap support for Q5JE74 as seed ortholog is 100%.
Bootstrap support for F1RFB3 as seed ortholog is 100%.

Group of orthologs #201. Best score 114 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:114 S.scrofa:11

Q5JG47              	100.00%		F1RJK2              	100.00%
Bootstrap support for Q5JG47 as seed ortholog is 100%.
Bootstrap support for F1RJK2 as seed ortholog is 60%.
Alternative seed ortholog is F1S7P1 (11 bits away from this cluster)

Group of orthologs #202. Best score 112 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:112 S.scrofa:112

Q5JDS2              	100.00%		F1S0R1              	100.00%
                    	       		F1SNJ8              	56.55%
                    	       		F1RFL9              	45.96%
                    	       		F1RVP8              	37.87%
Bootstrap support for Q5JDS2 as seed ortholog is 100%.
Bootstrap support for F1S0R1 as seed ortholog is 100%.

Group of orthologs #203. Best score 112 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:112 S.scrofa:44

Q5JI69              	100.00%		F1S0Y8              	100.00%
                    	       		F1S0C1              	57.10%
                    	       		F1S0Z0              	46.53%
                    	       		I3LDJ8              	30.06%
Bootstrap support for Q5JI69 as seed ortholog is 100%.
Bootstrap support for F1S0Y8 as seed ortholog is 86%.

Group of orthologs #204. Best score 112 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:112 S.scrofa:112

Q5JDI6              	100.00%		F1SI10              	100.00%
                    	       		Q29195              	94.97%
Bootstrap support for Q5JDI6 as seed ortholog is 100%.
Bootstrap support for F1SI10 as seed ortholog is 100%.

Group of orthologs #205. Best score 110 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:110 S.scrofa:23

Q5JDJ9              	100.00%		F1S9C9              	100.00%
                    	       		F1S9F7              	44.79%
                    	       		F1S9C7              	27.25%
Bootstrap support for Q5JDJ9 as seed ortholog is 100%.
Bootstrap support for F1S9C9 as seed ortholog is 84%.

Group of orthologs #206. Best score 109 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:109 S.scrofa:109

Q5JDK2              	100.00%		F1SQA4              	100.00%
                    	       		I3LR93              	46.75%
                    	       		F1SK80              	44.97%
                    	       		I3L6B0              	42.39%
                    	       		F1SPI3              	40.52%
                    	       		F1RF13              	37.49%
                    	       		F1RL70              	36.95%
                    	       		F1SFY9              	36.78%
                    	       		F1S024              	35.17%
                    	       		F1RN70              	34.64%
                    	       		I3LKJ8              	33.93%
                    	       		F1S2B0              	33.93%
                    	       		F1S025              	23.95%
                    	       		F1S028              	22.97%
                    	       		F1S617              	21.82%
                    	       		I3LUD9              	16.47%
                    	       		I3L6B4              	15.58%
                    	       		F1RYN4              	13.62%
Bootstrap support for Q5JDK2 as seed ortholog is 100%.
Bootstrap support for F1SQA4 as seed ortholog is 100%.

Group of orthologs #207. Best score 108 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:108 S.scrofa:108

Q5JHF7              	100.00%		F1RHM9              	100.00%
Q5JE68              	37.36%		F1S1L6              	14.88%
Bootstrap support for Q5JHF7 as seed ortholog is 100%.
Bootstrap support for F1RHM9 as seed ortholog is 100%.

Group of orthologs #208. Best score 108 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:108 S.scrofa:108

Q5JE01              	100.00%		F1RIS6              	100.00%
Bootstrap support for Q5JE01 as seed ortholog is 100%.
Bootstrap support for F1RIS6 as seed ortholog is 100%.

Group of orthologs #209. Best score 108 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:108 S.scrofa:59

O08467              	100.00%		F1RX87              	100.00%
Bootstrap support for O08467 as seed ortholog is 100%.
Bootstrap support for F1RX87 as seed ortholog is 89%.

Group of orthologs #210. Best score 107 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:107 S.scrofa:16

Q5JEU9              	100.00%		F1SKY2              	100.00%
                    	       		F1S194              	11.61%
Bootstrap support for Q5JEU9 as seed ortholog is 100%.
Bootstrap support for F1SKY2 as seed ortholog is 64%.
Alternative seed ortholog is F1RL41 (16 bits away from this cluster)

Group of orthologs #211. Best score 107 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:107 S.scrofa:43

Q5JJF2              	100.00%		I3LEX0              	100.00%
                    	       		Q29197              	43.12%
Bootstrap support for Q5JJF2 as seed ortholog is 100%.
Bootstrap support for I3LEX0 as seed ortholog is 94%.

Group of orthologs #212. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 S.scrofa:37

Q5JDZ9              	100.00%		F1RFL6              	100.00%
Q5JFM9              	6.93%		
Bootstrap support for Q5JDZ9 as seed ortholog is 100%.
Bootstrap support for F1RFL6 as seed ortholog is 91%.

Group of orthologs #213. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 S.scrofa:106

Q5JGJ4              	100.00%		P62279              	100.00%
                    	       		I3L7A9              	55.96%
Bootstrap support for Q5JGJ4 as seed ortholog is 100%.
Bootstrap support for P62279 as seed ortholog is 100%.

Group of orthologs #214. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 S.scrofa:106

Q5JIR1              	100.00%		F1SA40              	100.00%
Bootstrap support for Q5JIR1 as seed ortholog is 100%.
Bootstrap support for F1SA40 as seed ortholog is 100%.

Group of orthologs #215. Best score 105 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:105 S.scrofa:30

Q5JFD8              	100.00%		Q5FY69              	100.00%
Q5JIL6              	16.89%		F1S6E1              	56.75%
                    	       		A8I1B9              	51.06%
                    	       		P31636              	48.12%
                    	       		I3LKT6              	48.12%
                    	       		P26429              	46.74%
                    	       		I3LI77              	45.09%
                    	       		I3LG72              	29.38%
Bootstrap support for Q5JFD8 as seed ortholog is 100%.
Bootstrap support for Q5FY69 as seed ortholog is 76%.

Group of orthologs #216. Best score 105 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:105 S.scrofa:105

Q5JGC7              	100.00%		Q29558              	100.00%
                    	       		F1STS4              	71.17%
                    	       		F1RPN9              	51.99%
Bootstrap support for Q5JGC7 as seed ortholog is 100%.
Bootstrap support for Q29558 as seed ortholog is 100%.

Group of orthologs #217. Best score 104 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:104 S.scrofa:104

Q5JGN5              	100.00%		F1RGG1              	100.00%
                    	       		Q29308              	89.42%
                    	       		I3LQK3              	84.66%
Bootstrap support for Q5JGN5 as seed ortholog is 100%.
Bootstrap support for F1RGG1 as seed ortholog is 100%.

Group of orthologs #218. Best score 104 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:104 S.scrofa:104

Q5JET7              	100.00%		F1RHH2              	100.00%
                    	       		I3LA23              	90.33%
Bootstrap support for Q5JET7 as seed ortholog is 100%.
Bootstrap support for F1RHH2 as seed ortholog is 100%.

Group of orthologs #219. Best score 104 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:104 S.scrofa:104

Q5JID9              	100.00%		F1S5K2              	100.00%
Q5JJ59              	6.35%		
Bootstrap support for Q5JID9 as seed ortholog is 100%.
Bootstrap support for F1S5K2 as seed ortholog is 100%.

Group of orthologs #220. Best score 104 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:104 S.scrofa:104

Q5JEB7              	100.00%		F1S2V3              	100.00%
Bootstrap support for Q5JEB7 as seed ortholog is 100%.
Bootstrap support for F1S2V3 as seed ortholog is 100%.

Group of orthologs #221. Best score 104 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:104 S.scrofa:104

Q5JEX4              	100.00%		F1SMF3              	100.00%
Bootstrap support for Q5JEX4 as seed ortholog is 100%.
Bootstrap support for F1SMF3 as seed ortholog is 100%.

Group of orthologs #222. Best score 103 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:103 S.scrofa:38

Q5JGP4              	100.00%		F1RKX7              	100.00%
Bootstrap support for Q5JGP4 as seed ortholog is 100%.
Bootstrap support for F1RKX7 as seed ortholog is 96%.

Group of orthologs #223. Best score 102 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:102 S.scrofa:102

Q5JJE2              	100.00%		Q29201              	100.00%
                    	       		F1SP46              	94.18%
                    	       		F1SEG5              	92.06%
Bootstrap support for Q5JJE2 as seed ortholog is 100%.
Bootstrap support for Q29201 as seed ortholog is 100%.

Group of orthologs #224. Best score 101 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:101 S.scrofa:31

Q5JJB9              	100.00%		Q9MYY8              	100.00%
                    	       		I3L752              	56.25%
                    	       		F1RHN4              	46.71%
                    	       		F1RX66              	17.43%
Bootstrap support for Q5JJB9 as seed ortholog is 100%.
Bootstrap support for Q9MYY8 as seed ortholog is 49%.
Alternative seed ortholog is F1SUD4 (31 bits away from this cluster)

Group of orthologs #225. Best score 101 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:101 S.scrofa:101

Q5JH39              	100.00%		F1SG43              	100.00%
                    	       		I3LE64              	48.76%
                    	       		F1RMH3              	21.18%
Bootstrap support for Q5JH39 as seed ortholog is 100%.
Bootstrap support for F1SG43 as seed ortholog is 100%.

Group of orthologs #226. Best score 101 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:101 S.scrofa:101

Q5JF32              	100.00%		I3L813              	100.00%
Q5JFD3              	44.33%		
Bootstrap support for Q5JF32 as seed ortholog is 100%.
Bootstrap support for I3L813 as seed ortholog is 100%.

Group of orthologs #227. Best score 101 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:101 S.scrofa:101

Q5JH82              	100.00%		A5GFN5              	100.00%
Bootstrap support for Q5JH82 as seed ortholog is 100%.
Bootstrap support for A5GFN5 as seed ortholog is 100%.

Group of orthologs #228. Best score 101 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:101 S.scrofa:101

Q5JI74              	100.00%		F1RSA4              	100.00%
Bootstrap support for Q5JI74 as seed ortholog is 100%.
Bootstrap support for F1RSA4 as seed ortholog is 100%.

Group of orthologs #229. Best score 101 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:101 S.scrofa:101

Q5JG02              	100.00%		F1SNR0              	100.00%
Bootstrap support for Q5JG02 as seed ortholog is 100%.
Bootstrap support for F1SNR0 as seed ortholog is 100%.

Group of orthologs #230. Best score 101 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:101 S.scrofa:101

Q5JGT4              	100.00%		I3L8I5              	100.00%
Bootstrap support for Q5JGT4 as seed ortholog is 100%.
Bootstrap support for I3L8I5 as seed ortholog is 100%.

Group of orthologs #231. Best score 101 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:101 S.scrofa:18

Q5JHL8              	100.00%		I3LQ51              	100.00%
Bootstrap support for Q5JHL8 as seed ortholog is 100%.
Bootstrap support for I3LQ51 as seed ortholog is 75%.

Group of orthologs #232. Best score 100 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:100 S.scrofa:10

Q5JGK8              	100.00%		F1S8X9              	100.00%
Bootstrap support for Q5JGK8 as seed ortholog is 100%.
Bootstrap support for F1S8X9 as seed ortholog is 61%.
Alternative seed ortholog is Q9BEC7 (10 bits away from this cluster)

Group of orthologs #233. Best score 99 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:99 S.scrofa:30

Q5JIA1              	100.00%		F1SEE2              	100.00%
Bootstrap support for Q5JIA1 as seed ortholog is 100%.
Bootstrap support for F1SEE2 as seed ortholog is 85%.

Group of orthologs #234. Best score 96 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:96 S.scrofa:96

Q5JJF4              	100.00%		F1RRJ4              	100.00%
Bootstrap support for Q5JJF4 as seed ortholog is 100%.
Bootstrap support for F1RRJ4 as seed ortholog is 100%.

Group of orthologs #235. Best score 94 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:94 S.scrofa:8

Q5JI20              	100.00%		F1SD72              	100.00%
                    	       		F1SBG9              	38.83%
                    	       		F1SJK4              	29.71%
Bootstrap support for Q5JI20 as seed ortholog is 100%.
Bootstrap support for F1SD72 as seed ortholog is 60%.
Alternative seed ortholog is F1SN62 (8 bits away from this cluster)

Group of orthologs #236. Best score 94 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:94 S.scrofa:94

Q5JGH6              	100.00%		O79874              	100.00%
Q5JIL2              	10.49%		
Bootstrap support for Q5JGH6 as seed ortholog is 100%.
Bootstrap support for O79874 as seed ortholog is 100%.

Group of orthologs #237. Best score 94 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:46 S.scrofa:94

Q5JFV4              	100.00%		Q6TA49              	100.00%
                    	       		F1S7V7              	65.66%
Bootstrap support for Q5JFV4 as seed ortholog is 92%.
Bootstrap support for Q6TA49 as seed ortholog is 100%.

Group of orthologs #238. Best score 94 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:94 S.scrofa:94

Q5JFJ9              	100.00%		F1S7D0              	100.00%
Bootstrap support for Q5JFJ9 as seed ortholog is 100%.
Bootstrap support for F1S7D0 as seed ortholog is 100%.

Group of orthologs #239. Best score 94 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:94 S.scrofa:94

Q5JGZ7              	100.00%		F1SHX9              	100.00%
Bootstrap support for Q5JGZ7 as seed ortholog is 100%.
Bootstrap support for F1SHX9 as seed ortholog is 100%.

Group of orthologs #240. Best score 94 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:94 S.scrofa:94

Q5JDH4              	100.00%		I3LT81              	100.00%
Bootstrap support for Q5JDH4 as seed ortholog is 100%.
Bootstrap support for I3LT81 as seed ortholog is 100%.

Group of orthologs #241. Best score 92 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:92 S.scrofa:92

Q5JFK6              	100.00%		Q19QT9              	100.00%
Q5JES6              	18.75%		F1S9Q7              	80.05%
Bootstrap support for Q5JFK6 as seed ortholog is 100%.
Bootstrap support for Q19QT9 as seed ortholog is 100%.

Group of orthologs #242. Best score 91 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:91 S.scrofa:1

Q5JH34              	100.00%		F1RU54              	100.00%
Bootstrap support for Q5JH34 as seed ortholog is 100%.
Bootstrap support for F1RU54 as seed ortholog is 51%.
Alternative seed ortholog is Q6QAS5 (1 bits away from this cluster)

Group of orthologs #243. Best score 91 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:91 S.scrofa:91

Q5JDH1              	100.00%		F2Z522              	100.00%
Bootstrap support for Q5JDH1 as seed ortholog is 100%.
Bootstrap support for F2Z522 as seed ortholog is 100%.

Group of orthologs #244. Best score 91 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:91 S.scrofa:91

Q5JHY2              	100.00%		F1SQZ8              	100.00%
Bootstrap support for Q5JHY2 as seed ortholog is 100%.
Bootstrap support for F1SQZ8 as seed ortholog is 100%.

Group of orthologs #245. Best score 89 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:89 S.scrofa:89

Q5JH96              	100.00%		F1SK84              	100.00%
                    	       		I3LBL1              	5.39%
Bootstrap support for Q5JH96 as seed ortholog is 100%.
Bootstrap support for F1SK84 as seed ortholog is 100%.

Group of orthologs #246. Best score 89 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:89 S.scrofa:89

Q5JGR3              	100.00%		F2Z5V3              	100.00%
Bootstrap support for Q5JGR3 as seed ortholog is 100%.
Bootstrap support for F2Z5V3 as seed ortholog is 100%.

Group of orthologs #247. Best score 89 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:89 S.scrofa:89

Q5JJC3              	100.00%		F2Z5F8              	100.00%
Bootstrap support for Q5JJC3 as seed ortholog is 100%.
Bootstrap support for F2Z5F8 as seed ortholog is 100%.

Group of orthologs #248. Best score 89 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:22 S.scrofa:28

Q5JFZ8              	100.00%		P09623              	100.00%
Bootstrap support for Q5JFZ8 as seed ortholog is 73%.
Alternative seed ortholog is Q5JGZ8 (22 bits away from this cluster)
Bootstrap support for P09623 as seed ortholog is 84%.

Group of orthologs #249. Best score 88 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:88 S.scrofa:88

Q5JJG5              	100.00%		Q6QAT0              	100.00%
                    	       		F1SQI2              	77.84%
                    	       		F1SPL8              	67.57%
                    	       		I3LNB9              	61.62%
                    	       		I3LV37              	44.86%
Bootstrap support for Q5JJG5 as seed ortholog is 100%.
Bootstrap support for Q6QAT0 as seed ortholog is 100%.

Group of orthologs #250. Best score 88 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:88 S.scrofa:88

Q5JJF6              	100.00%		Q95307              	100.00%
                    	       		I3LN23              	57.75%
                    	       		I3L8K3              	46.52%
                    	       		F1RU15              	43.85%
Bootstrap support for Q5JJF6 as seed ortholog is 100%.
Bootstrap support for Q95307 as seed ortholog is 100%.

Group of orthologs #251. Best score 88 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:88 S.scrofa:88

Q5JIB6              	100.00%		F1S085              	100.00%
Q5JH42              	24.03%		F1S0C0              	24.43%
Bootstrap support for Q5JIB6 as seed ortholog is 100%.
Bootstrap support for F1S085 as seed ortholog is 100%.

Group of orthologs #252. Best score 88 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:88 S.scrofa:88

Q877I0              	100.00%		F1SQY2              	100.00%
Bootstrap support for Q877I0 as seed ortholog is 100%.
Bootstrap support for F1SQY2 as seed ortholog is 100%.

Group of orthologs #253. Best score 88 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:88 S.scrofa:88

Q5JEE1              	100.00%		P80895              	100.00%
Bootstrap support for Q5JEE1 as seed ortholog is 100%.
Bootstrap support for P80895 as seed ortholog is 100%.

Group of orthologs #254. Best score 87 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:87 S.scrofa:87

Q5JFZ5              	100.00%		A1XQU9              	100.00%
                    	       		F1SMQ1              	84.67%
Bootstrap support for Q5JFZ5 as seed ortholog is 100%.
Bootstrap support for A1XQU9 as seed ortholog is 100%.

Group of orthologs #255. Best score 87 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:87 S.scrofa:87

Q5JIV0              	100.00%		F1RJJ3              	100.00%
Bootstrap support for Q5JIV0 as seed ortholog is 100%.
Bootstrap support for F1RJJ3 as seed ortholog is 100%.

Group of orthologs #256. Best score 86 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:20 S.scrofa:86

Q5JIM5              	100.00%		F1RN34              	100.00%
Q5JIM4              	34.66%		
Q5JI36              	20.77%		
Q5JJ83              	10.22%		
Bootstrap support for Q5JIM5 as seed ortholog is 83%.
Bootstrap support for F1RN34 as seed ortholog is 100%.

Group of orthologs #257. Best score 86 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 S.scrofa:86

Q5JGM4              	100.00%		F2Z5C7              	100.00%
Bootstrap support for Q5JGM4 as seed ortholog is 100%.
Bootstrap support for F2Z5C7 as seed ortholog is 100%.

Group of orthologs #258. Best score 84 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:84 S.scrofa:12

Q68BJ6              	100.00%		F1S814              	100.00%
Q68BJ7              	33.17%		F1SJE6              	61.80%
Q6I7B6              	29.38%		
Bootstrap support for Q68BJ6 as seed ortholog is 100%.
Bootstrap support for F1S814 as seed ortholog is 61%.
Alternative seed ortholog is F1RQM2 (12 bits away from this cluster)

Group of orthologs #259. Best score 84 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:84 S.scrofa:84

Q5JJG3              	100.00%		F1SB47              	100.00%
Bootstrap support for Q5JJG3 as seed ortholog is 100%.
Bootstrap support for F1SB47 as seed ortholog is 100%.

Group of orthologs #260. Best score 84 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:84 S.scrofa:84

Q5JDH9              	100.00%		F2Z4Y8              	100.00%
Bootstrap support for Q5JDH9 as seed ortholog is 100%.
Bootstrap support for F2Z4Y8 as seed ortholog is 100%.

Group of orthologs #261. Best score 83 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:83 S.scrofa:23

Q5JHS6              	100.00%		F1RFH5              	100.00%
                    	       		F1RGQ4              	36.94%
Bootstrap support for Q5JHS6 as seed ortholog is 100%.
Bootstrap support for F1RFH5 as seed ortholog is 71%.
Alternative seed ortholog is I3LVB7 (23 bits away from this cluster)

Group of orthologs #262. Best score 83 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:83 S.scrofa:36

Q5JIY3              	100.00%		F1SUE3              	100.00%
Bootstrap support for Q5JIY3 as seed ortholog is 100%.
Bootstrap support for F1SUE3 as seed ortholog is 89%.

Group of orthologs #263. Best score 82 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:82 S.scrofa:82

Q5JJG7              	100.00%		I3LS96              	100.00%
                    	       		F1RLP2              	25.00%
Bootstrap support for Q5JJG7 as seed ortholog is 100%.
Bootstrap support for I3LS96 as seed ortholog is 100%.

Group of orthologs #264. Best score 82 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:82 S.scrofa:82

Q5JIU6              	100.00%		F1RG62              	100.00%
Bootstrap support for Q5JIU6 as seed ortholog is 100%.
Bootstrap support for F1RG62 as seed ortholog is 100%.

Group of orthologs #265. Best score 81 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:81 S.scrofa:9

Q5JI92              	100.00%		F1RFR2              	100.00%
                    	       		F1RVF1              	100.00%
Bootstrap support for Q5JI92 as seed ortholog is 100%.
Bootstrap support for F1RFR2 as seed ortholog is 40%.
Alternative seed ortholog is F1RJE9 (9 bits away from this cluster)
Bootstrap support for F1RVF1 as seed ortholog is 56%.
Alternative seed ortholog is F1RJE9 (9 bits away from this cluster)

Group of orthologs #266. Best score 81 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:81 S.scrofa:81

Q5JF42              	100.00%		F1RGU8              	100.00%
Bootstrap support for Q5JF42 as seed ortholog is 100%.
Bootstrap support for F1RGU8 as seed ortholog is 100%.

Group of orthologs #267. Best score 81 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:81 S.scrofa:81

Q5JG26              	100.00%		F1SK30              	100.00%
Bootstrap support for Q5JG26 as seed ortholog is 100%.
Bootstrap support for F1SK30 as seed ortholog is 100%.

Group of orthologs #268. Best score 80 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:80 S.scrofa:80

Q5JIE2              	100.00%		F1SB21              	100.00%
Q5JGQ5              	100.00%		F1SDC6              	100.00%
Q5JGQ4              	56.48%		
Bootstrap support for Q5JIE2 as seed ortholog is 100%.
Bootstrap support for Q5JGQ5 as seed ortholog is 100%.
Bootstrap support for F1SB21 as seed ortholog is 100%.
Bootstrap support for F1SDC6 as seed ortholog is 100%.

Group of orthologs #269. Best score 80 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:80 S.scrofa:80

Q5JE49              	100.00%		F2Z5J8              	100.00%
Bootstrap support for Q5JE49 as seed ortholog is 100%.
Bootstrap support for F2Z5J8 as seed ortholog is 100%.

Group of orthologs #270. Best score 79 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:79 S.scrofa:79

Q5JJ91              	100.00%		F1SDQ2              	100.00%
                    	       		F1S1E7              	49.02%
                    	       		I3LJE2              	47.62%
                    	       		F1SDI9              	44.91%
                    	       		I3LN38              	42.76%
                    	       		F1RJT3              	41.83%
                    	       		F1RLZ7              	41.27%
Bootstrap support for Q5JJ91 as seed ortholog is 100%.
Bootstrap support for F1SDQ2 as seed ortholog is 100%.

Group of orthologs #271. Best score 79 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:79 S.scrofa:79

Q5JJA4              	100.00%		F1SLL6              	100.00%
                    	       		F1RQW4              	24.43%
Bootstrap support for Q5JJA4 as seed ortholog is 100%.
Bootstrap support for F1SLL6 as seed ortholog is 100%.

Group of orthologs #272. Best score 77 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:77 S.scrofa:16

Q5JDV0              	100.00%		F1RGP3              	100.00%
Bootstrap support for Q5JDV0 as seed ortholog is 100%.
Bootstrap support for F1RGP3 as seed ortholog is 68%.
Alternative seed ortholog is F1SJT8 (16 bits away from this cluster)

Group of orthologs #273. Best score 77 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:77 S.scrofa:77

Q5JI44              	100.00%		I3LPQ4              	100.00%
Bootstrap support for Q5JI44 as seed ortholog is 100%.
Bootstrap support for I3LPQ4 as seed ortholog is 100%.

Group of orthologs #274. Best score 76 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:76 S.scrofa:76

Q5JI47              	100.00%		F1RZ91              	100.00%
                    	       		F1RZA7              	100.00%
Bootstrap support for Q5JI47 as seed ortholog is 100%.
Bootstrap support for F1RZ91 as seed ortholog is 100%.
Bootstrap support for F1RZA7 as seed ortholog is 100%.

Group of orthologs #275. Best score 76 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:76 S.scrofa:76

Q5JH93              	100.00%		I3LIH2              	100.00%
                    	       		O77591              	100.00%
Bootstrap support for Q5JH93 as seed ortholog is 100%.
Bootstrap support for I3LIH2 as seed ortholog is 100%.
Bootstrap support for O77591 as seed ortholog is 100%.

Group of orthologs #276. Best score 75 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:75 S.scrofa:75

Q5JHS3              	100.00%		F1SAH5              	100.00%
Bootstrap support for Q5JHS3 as seed ortholog is 100%.
Bootstrap support for F1SAH5 as seed ortholog is 100%.

Group of orthologs #277. Best score 74 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 S.scrofa:74

Q5JHC0              	100.00%		F1S586              	100.00%
Q5JHG7              	6.05%		
Bootstrap support for Q5JHC0 as seed ortholog is 100%.
Bootstrap support for F1S586 as seed ortholog is 100%.

Group of orthologs #278. Best score 74 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 S.scrofa:74

Q5JJC9              	100.00%		F2Z551              	100.00%
                    	       		F1SKC0              	66.67%
Bootstrap support for Q5JJC9 as seed ortholog is 100%.
Bootstrap support for F2Z551 as seed ortholog is 100%.

Group of orthologs #279. Best score 74 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 S.scrofa:74

Q5JGM0              	100.00%		F1SH34              	100.00%
Bootstrap support for Q5JGM0 as seed ortholog is 100%.
Bootstrap support for F1SH34 as seed ortholog is 100%.

Group of orthologs #280. Best score 73 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:73 S.scrofa:73

Q5JII2              	100.00%		F1RLC5              	100.00%
                    	       		P19130              	44.52%
                    	       		I3LP88              	34.27%
                    	       		F1SUK9              	32.87%
                    	       		F1RXU3              	30.30%
                    	       		F1RXT0              	29.14%
                    	       		F1SRY4              	15.38%
                    	       		F1SJA8              	11.66%
Bootstrap support for Q5JII2 as seed ortholog is 100%.
Bootstrap support for F1RLC5 as seed ortholog is 100%.

Group of orthologs #281. Best score 73 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:73 S.scrofa:73

Q5JJ26              	100.00%		F1RRF2              	100.00%
Bootstrap support for Q5JJ26 as seed ortholog is 100%.
Bootstrap support for F1RRF2 as seed ortholog is 100%.

Group of orthologs #282. Best score 73 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:73 S.scrofa:73

Q5JE35              	100.00%		F2Z554              	100.00%
Bootstrap support for Q5JE35 as seed ortholog is 100%.
Bootstrap support for F2Z554 as seed ortholog is 100%.

Group of orthologs #283. Best score 72 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:72 S.scrofa:72

Q5JDC4              	100.00%		F1RNN0              	100.00%
Bootstrap support for Q5JDC4 as seed ortholog is 100%.
Bootstrap support for F1RNN0 as seed ortholog is 100%.

Group of orthologs #284. Best score 72 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:72 S.scrofa:22

Q5JFY8              	100.00%		F1RNZ3              	100.00%
Bootstrap support for Q5JFY8 as seed ortholog is 100%.
Bootstrap support for F1RNZ3 as seed ortholog is 74%.
Alternative seed ortholog is F1RU12 (22 bits away from this cluster)

Group of orthologs #285. Best score 71 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:71 S.scrofa:71

Q5JHM0              	100.00%		F1RKC8              	100.00%
Q5JJC2              	16.74%		F1RKC9              	52.32%
Bootstrap support for Q5JHM0 as seed ortholog is 100%.
Bootstrap support for F1RKC8 as seed ortholog is 100%.

Group of orthologs #286. Best score 71 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:71 S.scrofa:71

Q5JDG1              	100.00%		F1SM56              	100.00%
                    	       		I3LF38              	100.00%
Bootstrap support for Q5JDG1 as seed ortholog is 100%.
Bootstrap support for F1SM56 as seed ortholog is 100%.
Bootstrap support for I3LF38 as seed ortholog is 100%.

Group of orthologs #287. Best score 71 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:71 S.scrofa:71

Q5JGQ0              	100.00%		F1S775              	100.00%
Bootstrap support for Q5JGQ0 as seed ortholog is 100%.
Bootstrap support for F1S775 as seed ortholog is 100%.

Group of orthologs #288. Best score 70 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:70 S.scrofa:70

Q5JJ28              	100.00%		F1SEJ2              	100.00%
                    	       		I3L7G5              	42.63%
Bootstrap support for Q5JJ28 as seed ortholog is 100%.
Bootstrap support for F1SEJ2 as seed ortholog is 100%.

Group of orthologs #289. Best score 70 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:70 S.scrofa:70

Q5JHP1              	100.00%		I3LTZ5              	100.00%
                    	       		F1SKR7              	82.54%
Bootstrap support for Q5JHP1 as seed ortholog is 100%.
Bootstrap support for I3LTZ5 as seed ortholog is 100%.

Group of orthologs #290. Best score 69 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:69 S.scrofa:2

Q8X270              	100.00%		Q9MYN5              	100.00%
                    	       		F1SFD7              	83.15%
Bootstrap support for Q8X270 as seed ortholog is 100%.
Bootstrap support for Q9MYN5 as seed ortholog is 53%.
Alternative seed ortholog is I3LTD4 (2 bits away from this cluster)

Group of orthologs #291. Best score 69 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:69 S.scrofa:69

Q5JHS0              	100.00%		F1RT14              	100.00%
Bootstrap support for Q5JHS0 as seed ortholog is 100%.
Bootstrap support for F1RT14 as seed ortholog is 100%.

Group of orthologs #292. Best score 69 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:69 S.scrofa:69

Q5JJF3              	100.00%		F1SRT1              	100.00%
Bootstrap support for Q5JJF3 as seed ortholog is 100%.
Bootstrap support for F1SRT1 as seed ortholog is 100%.

Group of orthologs #293. Best score 68 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:68 S.scrofa:68

Q5JFG1              	100.00%		F1STH7              	100.00%
Bootstrap support for Q5JFG1 as seed ortholog is 100%.
Bootstrap support for F1STH7 as seed ortholog is 100%.

Group of orthologs #294. Best score 68 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:68 S.scrofa:11

Q5JF34              	100.00%		F2Z4X7              	100.00%
Bootstrap support for Q5JF34 as seed ortholog is 100%.
Bootstrap support for F2Z4X7 as seed ortholog is 66%.
Alternative seed ortholog is P60899 (11 bits away from this cluster)

Group of orthologs #295. Best score 67 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:67 S.scrofa:67

Q5JF65              	100.00%		F1SUG7              	100.00%
                    	       		F1SUG8              	44.74%
                    	       		I3LR20              	8.55%
                    	       		I3L7B7              	7.63%
                    	       		I3LNN1              	5.17%
Bootstrap support for Q5JF65 as seed ortholog is 100%.
Bootstrap support for F1SUG7 as seed ortholog is 100%.

Group of orthologs #296. Best score 67 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:67 S.scrofa:13

Q5JGZ1              	100.00%		I3L8D4              	100.00%
Q5JH08              	9.08%		F1RSK5              	13.64%
                    	       		Q4LE88              	10.64%
                    	       		F1RII1              	9.38%
Bootstrap support for Q5JGZ1 as seed ortholog is 100%.
Bootstrap support for I3L8D4 as seed ortholog is 60%.
Alternative seed ortholog is F1S559 (13 bits away from this cluster)

Group of orthologs #297. Best score 67 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:67 S.scrofa:67

Q5JJ61              	100.00%		F1RIP1              	100.00%
                    	       		F1SR04              	69.26%
Bootstrap support for Q5JJ61 as seed ortholog is 100%.
Bootstrap support for F1RIP1 as seed ortholog is 100%.

Group of orthologs #298. Best score 67 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:67 S.scrofa:67

Q5JHT3              	100.00%		F1RX51              	100.00%
                    	       		K7GS62              	89.90%
Bootstrap support for Q5JHT3 as seed ortholog is 100%.
Bootstrap support for F1RX51 as seed ortholog is 100%.

Group of orthologs #299. Best score 67 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:67 S.scrofa:67

Q5JDG6              	100.00%		F1SME4              	100.00%
                    	       		F1RZR6              	24.45%
Bootstrap support for Q5JDG6 as seed ortholog is 100%.
Bootstrap support for F1SME4 as seed ortholog is 100%.

Group of orthologs #300. Best score 66 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:66 S.scrofa:66

Q5JH35              	100.00%		F1RS60              	100.00%
                    	       		P53027              	48.40%
                    	       		F1SCR8              	47.06%
                    	       		I3LES0              	42.25%
                    	       		F1RX79              	35.03%
Bootstrap support for Q5JH35 as seed ortholog is 100%.
Bootstrap support for F1RS60 as seed ortholog is 100%.

Group of orthologs #301. Best score 66 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:66 S.scrofa:15

Q5JF76              	100.00%		F1RV79              	100.00%
                    	       		I3LDU2              	60.25%
Bootstrap support for Q5JF76 as seed ortholog is 100%.
Bootstrap support for F1RV79 as seed ortholog is 67%.
Alternative seed ortholog is Q9TV69 (15 bits away from this cluster)

Group of orthologs #302. Best score 66 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:66 S.scrofa:10

Q5JJ48              	100.00%		P37111              	100.00%
Q5JH60              	5.36%		
Bootstrap support for Q5JJ48 as seed ortholog is 100%.
Bootstrap support for P37111 as seed ortholog is 61%.
Alternative seed ortholog is F1SNL7 (10 bits away from this cluster)

Group of orthologs #303. Best score 66 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:66 S.scrofa:66

Q5JE55              	100.00%		F1RXR9              	100.00%
Bootstrap support for Q5JE55 as seed ortholog is 100%.
Bootstrap support for F1RXR9 as seed ortholog is 100%.

Group of orthologs #304. Best score 65 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:65 S.scrofa:65

Q5JG46              	100.00%		F1SAS1              	100.00%
Q5JJ85              	100.00%		
Bootstrap support for Q5JG46 as seed ortholog is 100%.
Bootstrap support for Q5JJ85 as seed ortholog is 100%.
Bootstrap support for F1SAS1 as seed ortholog is 100%.

Group of orthologs #305. Best score 64 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:64 S.scrofa:64

Q5JEH9              	100.00%		Q03333              	100.00%
P58502              	6.03%		F1SBI5              	99.20%
                    	       		F1RNV5              	35.91%
                    	       		F1RMJ1              	35.83%
                    	       		I3LT46              	34.24%
                    	       		F1SJT0              	25.22%
Bootstrap support for Q5JEH9 as seed ortholog is 100%.
Bootstrap support for Q03333 as seed ortholog is 100%.

Group of orthologs #306. Best score 64 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:64 S.scrofa:64

Q5JIR5              	100.00%		F1S0X6              	100.00%
Bootstrap support for Q5JIR5 as seed ortholog is 100%.
Bootstrap support for F1S0X6 as seed ortholog is 100%.

Group of orthologs #307. Best score 64 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:64 S.scrofa:20

Q5JHP6              	100.00%		I3L8T8              	100.00%
Bootstrap support for Q5JHP6 as seed ortholog is 100%.
Bootstrap support for I3L8T8 as seed ortholog is 83%.

Group of orthologs #308. Best score 63 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:63 S.scrofa:63

Q5JGN3              	100.00%		I3L5D0              	100.00%
Bootstrap support for Q5JGN3 as seed ortholog is 100%.
Bootstrap support for I3L5D0 as seed ortholog is 100%.

Group of orthologs #309. Best score 62 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:62 S.scrofa:62

Q5JJH0              	100.00%		F1RGC0              	100.00%
                    	       		I3LK51              	89.24%
                    	       		F1RLR2              	27.49%
Bootstrap support for Q5JJH0 as seed ortholog is 100%.
Bootstrap support for F1RGC0 as seed ortholog is 100%.

Group of orthologs #310. Best score 62 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:62 S.scrofa:62

Q5JFW0              	100.00%		F1SLW7              	100.00%
                    	       		I3LQ24              	78.73%
                    	       		F1SF91              	55.49%
Bootstrap support for Q5JFW0 as seed ortholog is 100%.
Bootstrap support for F1SLW7 as seed ortholog is 100%.

Group of orthologs #311. Best score 62 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:62 S.scrofa:62

Q5JDS0              	100.00%		F1S5M0              	100.00%
                    	       		F1SHR3              	72.90%
Bootstrap support for Q5JDS0 as seed ortholog is 100%.
Bootstrap support for F1S5M0 as seed ortholog is 100%.

Group of orthologs #312. Best score 62 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:7 S.scrofa:62

Q5JIE3              	100.00%		F1SFR2              	100.00%
Bootstrap support for Q5JIE3 as seed ortholog is 65%.
Alternative seed ortholog is Q5JE63 (7 bits away from this cluster)
Bootstrap support for F1SFR2 as seed ortholog is 100%.

Group of orthologs #313. Best score 62 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:62 S.scrofa:62

Q5JDM6              	100.00%		I3L707              	100.00%
Bootstrap support for Q5JDM6 as seed ortholog is 100%.
Bootstrap support for I3L707 as seed ortholog is 100%.

Group of orthologs #314. Best score 62 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:62 S.scrofa:62

Q5JGR4              	100.00%		Q6QAT1              	100.00%
Bootstrap support for Q5JGR4 as seed ortholog is 100%.
Bootstrap support for Q6QAT1 as seed ortholog is 100%.

Group of orthologs #315. Best score 61 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 S.scrofa:61

Q5JDG7              	100.00%		P00819              	100.00%
                    	       		I3LC10              	60.28%
                    	       		I3LGV7              	60.28%
                    	       		P24540              	46.10%
Bootstrap support for Q5JDG7 as seed ortholog is 100%.
Bootstrap support for P00819 as seed ortholog is 100%.

Group of orthologs #316. Best score 61 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 S.scrofa:61

Q5JI42              	100.00%		F2Z5M3              	100.00%
Bootstrap support for Q5JI42 as seed ortholog is 100%.
Bootstrap support for F2Z5M3 as seed ortholog is 100%.

Group of orthologs #317. Best score 60 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:60 S.scrofa:60

Q5JIC9              	100.00%		F1SGX0              	100.00%
Q5JHD3              	6.91%		
Bootstrap support for Q5JIC9 as seed ortholog is 100%.
Bootstrap support for F1SGX0 as seed ortholog is 100%.

Group of orthologs #318. Best score 60 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:60 S.scrofa:60

Q5JIJ0              	100.00%		F1SJI1              	100.00%
                    	       		B6UV57              	17.54%
Bootstrap support for Q5JIJ0 as seed ortholog is 100%.
Bootstrap support for F1SJI1 as seed ortholog is 100%.

Group of orthologs #319. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 S.scrofa:59

Q5JEN3              	100.00%		F1SI13              	100.00%
                    	       		F1RQ06              	18.13%
                    	       		Q2VTP6              	16.58%
                    	       		F2Z5F0              	13.47%
Bootstrap support for Q5JEN3 as seed ortholog is 100%.
Bootstrap support for F1SI13 as seed ortholog is 100%.

Group of orthologs #320. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 S.scrofa:59

Q5JJG9              	100.00%		A5GFQ0              	100.00%
                    	       		F1RWI5              	28.27%
                    	       		F1SQ77              	23.13%
Bootstrap support for Q5JJG9 as seed ortholog is 100%.
Bootstrap support for A5GFQ0 as seed ortholog is 100%.

Group of orthologs #321. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 S.scrofa:59

Q5JEX9              	100.00%		F1RV70              	100.00%
Bootstrap support for Q5JEX9 as seed ortholog is 100%.
Bootstrap support for F1RV70 as seed ortholog is 100%.

Group of orthologs #322. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 S.scrofa:59

Q5JE65              	100.00%		F1SM93              	100.00%
Bootstrap support for Q5JE65 as seed ortholog is 100%.
Bootstrap support for F1SM93 as seed ortholog is 100%.

Group of orthologs #323. Best score 58 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:58 S.scrofa:58

Q5JE39              	100.00%		F1SI90              	100.00%
Q5JD05              	15.96%		
Bootstrap support for Q5JE39 as seed ortholog is 100%.
Bootstrap support for F1SI90 as seed ortholog is 100%.

Group of orthologs #324. Best score 58 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:58 S.scrofa:58

Q5JEE0              	100.00%		F1RIU1              	100.00%
Bootstrap support for Q5JEE0 as seed ortholog is 100%.
Bootstrap support for F1RIU1 as seed ortholog is 100%.

Group of orthologs #325. Best score 58 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:58 S.scrofa:2

Q5JIY4              	100.00%		F1SRD6              	100.00%
Bootstrap support for Q5JIY4 as seed ortholog is 100%.
Bootstrap support for F1SRD6 as seed ortholog is 50%.
Alternative seed ortholog is I3LJZ9 (2 bits away from this cluster)

Group of orthologs #326. Best score 58 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:58 S.scrofa:58

Q5JJ72              	100.00%		I3LGL1              	100.00%
Bootstrap support for Q5JJ72 as seed ortholog is 100%.
Bootstrap support for I3LGL1 as seed ortholog is 100%.

Group of orthologs #327. Best score 57 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:57 S.scrofa:57

Q5JIY8              	100.00%		F1S2E5              	100.00%
                    	       		F1SNB6              	63.57%
                    	       		I3LK07              	63.57%
Bootstrap support for Q5JIY8 as seed ortholog is 100%.
Bootstrap support for F1S2E5 as seed ortholog is 100%.

Group of orthologs #328. Best score 57 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:57 S.scrofa:57

Q5JIR4              	100.00%		F1SMN6              	100.00%
Bootstrap support for Q5JIR4 as seed ortholog is 100%.
Bootstrap support for F1SMN6 as seed ortholog is 100%.

Group of orthologs #329. Best score 57 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:57 S.scrofa:57

Q5JIE1              	100.00%		I3LFN2              	100.00%
Bootstrap support for Q5JIE1 as seed ortholog is 100%.
Bootstrap support for I3LFN2 as seed ortholog is 100%.

Group of orthologs #330. Best score 56 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:56 S.scrofa:56

Q5JH80              	100.00%		F1SJ05              	100.00%
Bootstrap support for Q5JH80 as seed ortholog is 100%.
Bootstrap support for F1SJ05 as seed ortholog is 100%.

Group of orthologs #331. Best score 56 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:56 S.scrofa:56

Q5JCY8              	100.00%		I3L7E1              	100.00%
Bootstrap support for Q5JCY8 as seed ortholog is 100%.
Bootstrap support for I3L7E1 as seed ortholog is 100%.

Group of orthologs #332. Best score 55 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:55 S.scrofa:55

Q5JEN7              	100.00%		O19069              	100.00%
Q5JIA8              	42.58%		
Q5JEY6              	37.21%		
Q5JFH7              	35.27%		
Q5JEW2              	33.79%		
Bootstrap support for Q5JEN7 as seed ortholog is 100%.
Bootstrap support for O19069 as seed ortholog is 100%.

Group of orthologs #333. Best score 55 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:55 S.scrofa:55

Q5JFX3              	100.00%		F1RQ02              	100.00%
Bootstrap support for Q5JFX3 as seed ortholog is 100%.
Bootstrap support for F1RQ02 as seed ortholog is 100%.

Group of orthologs #334. Best score 54 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:54 S.scrofa:54

Q5JE10              	100.00%		F1RZ75              	100.00%
                    	       		F1RKA5              	25.89%
                    	       		F1RQQ6              	21.86%
                    	       		F1RQS0              	18.80%
                    	       		Q58D68              	16.00%
                    	       		K7GMV8              	15.38%
                    	       		F1RSZ8              	11.97%
                    	       		K7N7E6              	9.77%
                    	       		I3L8R7              	7.33%
Bootstrap support for Q5JE10 as seed ortholog is 100%.
Bootstrap support for F1RZ75 as seed ortholog is 100%.

Group of orthologs #335. Best score 54 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:54 S.scrofa:54

Q5JDR9              	100.00%		F1RXD2              	100.00%
                    	       		F2Z5H6              	66.87%
Bootstrap support for Q5JDR9 as seed ortholog is 100%.
Bootstrap support for F1RXD2 as seed ortholog is 100%.

Group of orthologs #336. Best score 54 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:54 S.scrofa:54

Q5JDC1              	100.00%		F1SNS5              	100.00%
Q5JE69              	12.54%		
Bootstrap support for Q5JDC1 as seed ortholog is 100%.
Bootstrap support for F1SNS5 as seed ortholog is 100%.

Group of orthologs #337. Best score 53 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:53 S.scrofa:53

Q5JFV5              	100.00%		I3LIL5              	100.00%
                    	       		F1RZW6              	64.90%
Bootstrap support for Q5JFV5 as seed ortholog is 100%.
Bootstrap support for I3LIL5 as seed ortholog is 100%.

Group of orthologs #338. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 S.scrofa:52

Q8X268              	100.00%		P00690              	100.00%
                    	       		F1S574              	99.52%
                    	       		I3L5F2              	98.17%
                    	       		I3LHC3              	70.07%
                    	       		I3LLP2              	69.30%
                    	       		F1S573              	68.24%
Bootstrap support for Q8X268 as seed ortholog is 100%.
Bootstrap support for P00690 as seed ortholog is 100%.

Group of orthologs #339. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 S.scrofa:52

Q5JJG2              	100.00%		F2Z5R7              	100.00%
                    	       		Q6QAP6              	100.00%
                    	       		I3LJY0              	71.05%
                    	       		I3LS69              	69.74%
                    	       		F1SJZ7              	57.89%
Bootstrap support for Q5JJG2 as seed ortholog is 100%.
Bootstrap support for F2Z5R7 as seed ortholog is 100%.
Bootstrap support for Q6QAP6 as seed ortholog is 100%.

Group of orthologs #340. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 S.scrofa:52

Q5JJ65              	100.00%		F1RY91              	100.00%
                    	       		I3L939              	100.00%
Bootstrap support for Q5JJ65 as seed ortholog is 100%.
Bootstrap support for F1RY91 as seed ortholog is 100%.
Bootstrap support for I3L939 as seed ortholog is 100%.

Group of orthologs #341. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 S.scrofa:52

Q5JF17              	100.00%		F1SF93              	100.00%
                    	       		F1SNG9              	37.50%
Bootstrap support for Q5JF17 as seed ortholog is 100%.
Bootstrap support for F1SF93 as seed ortholog is 100%.

Group of orthologs #342. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 S.scrofa:52

Q5JH78              	100.00%		F1SQN5              	100.00%
                    	       		I3LAQ2              	100.00%
Bootstrap support for Q5JH78 as seed ortholog is 100%.
Bootstrap support for F1SQN5 as seed ortholog is 100%.
Bootstrap support for I3LAQ2 as seed ortholog is 100%.

Group of orthologs #343. Best score 51 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:51 S.scrofa:51

Q5JIU7              	100.00%		F1STB2              	100.00%
Q5JI19              	22.30%		F1RKI3              	42.39%
Bootstrap support for Q5JIU7 as seed ortholog is 100%.
Bootstrap support for F1STB2 as seed ortholog is 100%.

Group of orthologs #344. Best score 51 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:51 S.scrofa:51

Q5JJF5              	100.00%		I3LFL4              	100.00%
                    	       		Q95342              	50.70%
Bootstrap support for Q5JJF5 as seed ortholog is 100%.
Bootstrap support for I3LFL4 as seed ortholog is 100%.

Group of orthologs #345. Best score 50 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:50 S.scrofa:50

Q5JGF8              	100.00%		Q09138              	100.00%
                    	       		F1SSN2              	69.50%
                    	       		Q9MYP4              	58.17%
                    	       		I3L9V9              	46.33%
Bootstrap support for Q5JGF8 as seed ortholog is 100%.
Bootstrap support for Q09138 as seed ortholog is 100%.

Group of orthologs #346. Best score 50 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:50 S.scrofa:2

Q5JIE0              	100.00%		F2Z5S4              	100.00%
                    	       		I3LUB7              	63.87%
Bootstrap support for Q5JIE0 as seed ortholog is 100%.
Bootstrap support for F2Z5S4 as seed ortholog is 49%.
Alternative seed ortholog is F2Z5C5 (2 bits away from this cluster)

Group of orthologs #347. Best score 49 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:49 S.scrofa:49

Q5JE50              	100.00%		F2Z514              	100.00%
                    	       		F2Z5B7              	100.00%
Bootstrap support for Q5JE50 as seed ortholog is 100%.
Bootstrap support for F2Z514 as seed ortholog is 100%.
Bootstrap support for F2Z5B7 as seed ortholog is 100%.

Group of orthologs #348. Best score 49 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:49 S.scrofa:49

Q5JD73              	100.00%		F1S0E1              	100.00%
Bootstrap support for Q5JD73 as seed ortholog is 100%.
Bootstrap support for F1S0E1 as seed ortholog is 100%.

Group of orthologs #349. Best score 49 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:49 S.scrofa:49

Q5JE86              	100.00%		F1S8Y4              	100.00%
Bootstrap support for Q5JE86 as seed ortholog is 100%.
Bootstrap support for F1S8Y4 as seed ortholog is 100%.

Group of orthologs #350. Best score 48 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:48 S.scrofa:48

Q5JFQ4              	100.00%		F1RJL8              	100.00%
Bootstrap support for Q5JFQ4 as seed ortholog is 100%.
Bootstrap support for F1RJL8 as seed ortholog is 100%.

Group of orthologs #351. Best score 48 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:48 S.scrofa:48

Q5JID5              	100.00%		F1S2W7              	100.00%
Bootstrap support for Q5JID5 as seed ortholog is 100%.
Bootstrap support for F1S2W7 as seed ortholog is 100%.

Group of orthologs #352. Best score 48 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:48 S.scrofa:48

Q5JHB2              	100.00%		I3LKX1              	100.00%
Bootstrap support for Q5JHB2 as seed ortholog is 100%.
Bootstrap support for I3LKX1 as seed ortholog is 100%.

Group of orthologs #353. Best score 47 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:47 S.scrofa:47

Q5JJF7              	100.00%		F2Z5B9              	100.00%
                    	       		Q29223              	86.49%
Bootstrap support for Q5JJF7 as seed ortholog is 100%.
Bootstrap support for F2Z5B9 as seed ortholog is 100%.

Group of orthologs #354. Best score 44 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:44 S.scrofa:44

Q5JHW2              	100.00%		F1S6B6              	100.00%
Q5JGT0              	24.77%		I3LIW4              	62.83%
Q5JIW7              	23.42%		P16549              	61.21%
                    	       		F1SDB7              	60.22%
                    	       		I3LS94              	59.73%
                    	       		F1S6B7              	56.01%
                    	       		F1S246              	53.53%
Bootstrap support for Q5JHW2 as seed ortholog is 100%.
Bootstrap support for F1S6B6 as seed ortholog is 100%.

Group of orthologs #355. Best score 44 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:44 S.scrofa:44

Q5JGZ2              	100.00%		I3LJW3              	100.00%
Q5JGZ3              	9.67%		I3LJS4              	23.98%
Bootstrap support for Q5JGZ2 as seed ortholog is 100%.
Bootstrap support for I3LJW3 as seed ortholog is 100%.

Group of orthologs #356. Best score 44 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:44 S.scrofa:44

Q8NKS4              	100.00%		F1RS78              	100.00%
Q5JJ90              	13.51%		
Bootstrap support for Q8NKS4 as seed ortholog is 100%.
Bootstrap support for F1RS78 as seed ortholog is 100%.

Group of orthologs #357. Best score 44 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:44 S.scrofa:44

Q5JE88              	100.00%		I3LRD0              	100.00%
                    	       		I3LS76              	8.68%
Bootstrap support for Q5JE88 as seed ortholog is 100%.
Bootstrap support for I3LRD0 as seed ortholog is 100%.

Group of orthologs #358. Best score 44 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:44 S.scrofa:44

Q5JHG0              	100.00%		F1SGT2              	100.00%
Bootstrap support for Q5JHG0 as seed ortholog is 100%.
Bootstrap support for F1SGT2 as seed ortholog is 100%.

Group of orthologs #359. Best score 44 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:44 S.scrofa:44

Q5JEL5              	100.00%		F1SRY2              	100.00%
Bootstrap support for Q5JEL5 as seed ortholog is 100%.
Bootstrap support for F1SRY2 as seed ortholog is 100%.

Group of orthologs #360. Best score 44 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:44 S.scrofa:44

Q5JDA4              	100.00%		I3LBG2              	100.00%
Bootstrap support for Q5JDA4 as seed ortholog is 100%.
Bootstrap support for I3LBG2 as seed ortholog is 100%.

Group of orthologs #361. Best score 43 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:43 S.scrofa:43

Q5JI46              	100.00%		F1RGU1              	100.00%
Bootstrap support for Q5JI46 as seed ortholog is 100%.
Bootstrap support for F1RGU1 as seed ortholog is 100%.

Group of orthologs #362. Best score 42 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:42 S.scrofa:42

Q5JH23              	100.00%		I3LFG5              	100.00%
                    	       		I3LGA2              	34.85%
Bootstrap support for Q5JH23 as seed ortholog is 100%.
Bootstrap support for I3LFG5 as seed ortholog is 100%.

Group of orthologs #363. Best score 42 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:42 S.scrofa:42

Q5JDL4              	100.00%		I3LSU3              	100.00%
                    	       		F1S1J8              	7.30%
Bootstrap support for Q5JDL4 as seed ortholog is 100%.
Bootstrap support for I3LSU3 as seed ortholog is 100%.

Group of orthologs #364. Best score 42 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:42 S.scrofa:42

Q5JJC1              	100.00%		I3LSZ5              	100.00%
                    	       		I3LRA0              	35.47%
Bootstrap support for Q5JJC1 as seed ortholog is 100%.
Bootstrap support for I3LSZ5 as seed ortholog is 100%.

Group of orthologs #365. Best score 41 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:41 S.scrofa:41

Q5JEG7              	100.00%		I3LK34              	100.00%
Q5JD61              	12.53%		
Q5JFE3              	6.96%		
Bootstrap support for Q5JEG7 as seed ortholog is 100%.
Bootstrap support for I3LK34 as seed ortholog is 100%.

Group of orthologs #366. Best score 41 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:41 S.scrofa:41

Q5JFK7              	100.00%		I3LID0              	100.00%
                    	       		F1RXH0              	84.52%
Bootstrap support for Q5JFK7 as seed ortholog is 100%.
Bootstrap support for I3LID0 as seed ortholog is 100%.