###################################
354 groups of orthologs
419 in-paralogs from P.kodakaraensis
462 in-paralogs from P.pallidum
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 778 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:778 P.pallidum:45

Q5JE32              	100.00%		D3BHD6              	100.00%
Bootstrap support for Q5JE32 as seed ortholog is 100%.
Bootstrap support for D3BHD6 as seed ortholog is 71%.
Alternative seed ortholog is D3B936 (45 bits away from this cluster)

Group of orthologs #2. Best score 664 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:664 P.pallidum:207

Q5JE33              	100.00%		D3BKC8              	100.00%
                    	       		D3BJK4              	7.05%
Bootstrap support for Q5JE33 as seed ortholog is 100%.
Bootstrap support for D3BKC8 as seed ortholog is 99%.

Group of orthologs #3. Best score 616 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:616 P.pallidum:118

Q5JE98              	100.00%		D3BIX9              	100.00%
Q9V2X2              	53.18%		
Bootstrap support for Q5JE98 as seed ortholog is 100%.
Bootstrap support for D3BIX9 as seed ortholog is 98%.

Group of orthologs #4. Best score 593 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:593 P.pallidum:482

Q5JIR3              	100.00%		D3B700              	100.00%
Bootstrap support for Q5JIR3 as seed ortholog is 100%.
Bootstrap support for D3B700 as seed ortholog is 100%.

Group of orthologs #5. Best score 588 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:588 P.pallidum:162

Q5JDF4              	100.00%		D3BB49              	100.00%
Bootstrap support for Q5JDF4 as seed ortholog is 100%.
Bootstrap support for D3BB49 as seed ortholog is 99%.

Group of orthologs #6. Best score 567 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:567 P.pallidum:434

Q5JIR2              	100.00%		D3B5K2              	100.00%
Bootstrap support for Q5JIR2 as seed ortholog is 100%.
Bootstrap support for D3B5K2 as seed ortholog is 100%.

Group of orthologs #7. Best score 561 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:561 P.pallidum:279

Q5JIS8              	100.00%		D3BVH1              	100.00%
Bootstrap support for Q5JIS8 as seed ortholog is 100%.
Bootstrap support for D3BVH1 as seed ortholog is 100%.

Group of orthologs #8. Best score 541 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:541 P.pallidum:433

Q5JDX6              	100.00%		D3AZB7              	100.00%
Bootstrap support for Q5JDX6 as seed ortholog is 100%.
Bootstrap support for D3AZB7 as seed ortholog is 100%.

Group of orthologs #9. Best score 521 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:521 P.pallidum:521

Q5JGF1              	100.00%		D3B5W3              	100.00%
Bootstrap support for Q5JGF1 as seed ortholog is 100%.
Bootstrap support for D3B5W3 as seed ortholog is 100%.

Group of orthologs #10. Best score 519 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:519 P.pallidum:519

Q5JIG4              	100.00%		D3BT33              	100.00%
Bootstrap support for Q5JIG4 as seed ortholog is 100%.
Bootstrap support for D3BT33 as seed ortholog is 100%.

Group of orthologs #11. Best score 511 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:511 P.pallidum:140

Q5JJ31              	100.00%		D3BUX1              	100.00%
Bootstrap support for Q5JJ31 as seed ortholog is 100%.
Bootstrap support for D3BUX1 as seed ortholog is 97%.

Group of orthologs #12. Best score 476 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:476 P.pallidum:143

Q5JFZ3              	100.00%		D3BU68              	100.00%
                    	       		D3BHD0              	37.82%
                    	       		D3BFQ2              	6.60%
Bootstrap support for Q5JFZ3 as seed ortholog is 100%.
Bootstrap support for D3BU68 as seed ortholog is 98%.

Group of orthologs #13. Best score 462 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:462 P.pallidum:285

Q8NKR7              	100.00%		D3B015              	100.00%
Bootstrap support for Q8NKR7 as seed ortholog is 100%.
Bootstrap support for D3B015 as seed ortholog is 99%.

Group of orthologs #14. Best score 460 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:460 P.pallidum:460

Q5JCZ1              	100.00%		D3BEZ7              	100.00%
Bootstrap support for Q5JCZ1 as seed ortholog is 100%.
Bootstrap support for D3BEZ7 as seed ortholog is 100%.

Group of orthologs #15. Best score 459 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:375 P.pallidum:459

Q5JEV6              	100.00%		D3BP87              	100.00%
                    	       		D3BH75              	49.25%
Bootstrap support for Q5JEV6 as seed ortholog is 100%.
Bootstrap support for D3BP87 as seed ortholog is 100%.

Group of orthologs #16. Best score 430 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:430 P.pallidum:130

Q5JFZ4              	100.00%		D3BP51              	100.00%
Bootstrap support for Q5JFZ4 as seed ortholog is 100%.
Bootstrap support for D3BP51 as seed ortholog is 99%.

Group of orthologs #17. Best score 415 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:415 P.pallidum:415

Q5JIP3              	100.00%		D3BSF9              	100.00%
Bootstrap support for Q5JIP3 as seed ortholog is 100%.
Bootstrap support for D3BSF9 as seed ortholog is 100%.

Group of orthologs #18. Best score 403 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:403 P.pallidum:29

Q5JJA2              	100.00%		D3BDE5              	100.00%
Bootstrap support for Q5JJA2 as seed ortholog is 100%.
Bootstrap support for D3BDE5 as seed ortholog is 64%.
Alternative seed ortholog is D3BQ59 (29 bits away from this cluster)

Group of orthologs #19. Best score 401 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:401 P.pallidum:401

Q5JID8              	100.00%		D3B7L4              	100.00%
Bootstrap support for Q5JID8 as seed ortholog is 100%.
Bootstrap support for D3B7L4 as seed ortholog is 100%.

Group of orthologs #20. Best score 390 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:390 P.pallidum:229

Q5JDZ7              	100.00%		D3BAM8              	100.00%
Bootstrap support for Q5JDZ7 as seed ortholog is 100%.
Bootstrap support for D3BAM8 as seed ortholog is 100%.

Group of orthologs #21. Best score 386 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:386 P.pallidum:4

Q5JGE5              	100.00%		D3BI12              	100.00%
Bootstrap support for Q5JGE5 as seed ortholog is 100%.
Bootstrap support for D3BI12 as seed ortholog is 54%.
Alternative seed ortholog is D3BB83 (4 bits away from this cluster)

Group of orthologs #22. Best score 384 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:384 P.pallidum:11

Q52500              	100.00%		D3B3N8              	100.00%
P61111              	100.00%		D3B0K9              	100.00%
Bootstrap support for Q52500 as seed ortholog is 100%.
Bootstrap support for P61111 as seed ortholog is 100%.
Bootstrap support for D3B3N8 as seed ortholog is 59%.
Alternative seed ortholog is D3BFC6 (11 bits away from this cluster)
Bootstrap support for D3B0K9 as seed ortholog is 63%.
Alternative seed ortholog is D3BFC6 (11 bits away from this cluster)

Group of orthologs #23. Best score 376 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:285 P.pallidum:275

Q5JH71              	100.00%		D3BT14              	100.00%
Bootstrap support for Q5JH71 as seed ortholog is 100%.
Bootstrap support for D3BT14 as seed ortholog is 100%.

Group of orthologs #24. Best score 370 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:370 P.pallidum:88

O93623              	100.00%		D3BT28              	100.00%
Bootstrap support for O93623 as seed ortholog is 100%.
Bootstrap support for D3BT28 as seed ortholog is 97%.

Group of orthologs #25. Best score 363 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:363 P.pallidum:363

Q5JI71              	100.00%		D3B588              	100.00%
                    	       		D3BKC2              	21.12%
Bootstrap support for Q5JI71 as seed ortholog is 100%.
Bootstrap support for D3B588 as seed ortholog is 100%.

Group of orthologs #26. Best score 359 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:359 P.pallidum:223

Q5JDL3              	100.00%		D3B255              	100.00%
                    	       		D3B915              	25.08%
Bootstrap support for Q5JDL3 as seed ortholog is 100%.
Bootstrap support for D3B255 as seed ortholog is 100%.

Group of orthologs #27. Best score 358 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:358 P.pallidum:89

Q5JD45              	100.00%		D3BQM3              	100.00%
Bootstrap support for Q5JD45 as seed ortholog is 100%.
Bootstrap support for D3BQM3 as seed ortholog is 97%.

Group of orthologs #28. Best score 355 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:355 P.pallidum:10

Q5JHS5              	100.00%		D3B6W8              	100.00%
                    	       		D3B5U3              	5.23%
Bootstrap support for Q5JHS5 as seed ortholog is 100%.
Bootstrap support for D3B6W8 as seed ortholog is 61%.
Alternative seed ortholog is D3BGX5 (10 bits away from this cluster)

Group of orthologs #29. Best score 351 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:351 P.pallidum:5

Q5JIT1              	100.00%		D3BB39              	100.00%
Bootstrap support for Q5JIT1 as seed ortholog is 100%.
Bootstrap support for D3BB39 as seed ortholog is 50%.
Alternative seed ortholog is D3BRF2 (5 bits away from this cluster)

Group of orthologs #30. Best score 348 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:159 P.pallidum:348

Q5JJC8              	100.00%		D3BBV3              	100.00%
Bootstrap support for Q5JJC8 as seed ortholog is 100%.
Bootstrap support for D3BBV3 as seed ortholog is 100%.

Group of orthologs #31. Best score 336 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:336 P.pallidum:336

Q5JFR1              	100.00%		D3BPW8              	100.00%
Bootstrap support for Q5JFR1 as seed ortholog is 100%.
Bootstrap support for D3BPW8 as seed ortholog is 100%.

Group of orthologs #32. Best score 324 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:324 P.pallidum:324

Q5JED2              	100.00%		D3BNY4              	100.00%
Bootstrap support for Q5JED2 as seed ortholog is 100%.
Bootstrap support for D3BNY4 as seed ortholog is 100%.

Group of orthologs #33. Best score 316 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:316 P.pallidum:316

Q5JFN4              	100.00%		D3BPT5              	100.00%
Bootstrap support for Q5JFN4 as seed ortholog is 100%.
Bootstrap support for D3BPT5 as seed ortholog is 100%.

Group of orthologs #34. Best score 310 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:310 P.pallidum:310

Q5JFM0              	100.00%		D3BQJ8              	100.00%
Bootstrap support for Q5JFM0 as seed ortholog is 100%.
Bootstrap support for D3BQJ8 as seed ortholog is 100%.

Group of orthologs #35. Best score 306 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:306 P.pallidum:306

Q5JE75              	100.00%		D3BEX2              	100.00%
Bootstrap support for Q5JE75 as seed ortholog is 100%.
Bootstrap support for D3BEX2 as seed ortholog is 100%.

Group of orthologs #36. Best score 301 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:301 P.pallidum:301

Q5JIQ2              	100.00%		D3BLC0              	100.00%
Bootstrap support for Q5JIQ2 as seed ortholog is 100%.
Bootstrap support for D3BLC0 as seed ortholog is 100%.

Group of orthologs #37. Best score 300 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:300 P.pallidum:300

Q5JH31              	100.00%		D3BAS1              	100.00%
Bootstrap support for Q5JH31 as seed ortholog is 100%.
Bootstrap support for D3BAS1 as seed ortholog is 100%.

Group of orthologs #38. Best score 299 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:299 P.pallidum:69

Q5JFK3              	100.00%		D3BJ28              	100.00%
Bootstrap support for Q5JFK3 as seed ortholog is 100%.
Bootstrap support for D3BJ28 as seed ortholog is 94%.

Group of orthologs #39. Best score 298 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:298 P.pallidum:53

Q5JGN7              	100.00%		D3BPX3              	100.00%
                    	       		D3BC16              	25.62%
Bootstrap support for Q5JGN7 as seed ortholog is 100%.
Bootstrap support for D3BPX3 as seed ortholog is 78%.

Group of orthologs #40. Best score 294 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:294 P.pallidum:218

Q5JF49              	100.00%		D3BRI9              	100.00%
Bootstrap support for Q5JF49 as seed ortholog is 100%.
Bootstrap support for D3BRI9 as seed ortholog is 100%.

Group of orthologs #41. Best score 292 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:292 P.pallidum:292

Q5JEW3              	100.00%		D3AXJ0              	100.00%
Bootstrap support for Q5JEW3 as seed ortholog is 100%.
Bootstrap support for D3AXJ0 as seed ortholog is 100%.

Group of orthologs #42. Best score 289 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:289 P.pallidum:289

Q5JJH1              	100.00%		D3B1K5              	100.00%
Bootstrap support for Q5JJH1 as seed ortholog is 100%.
Bootstrap support for D3B1K5 as seed ortholog is 100%.

Group of orthologs #43. Best score 284 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:284 P.pallidum:284

Q5JEY0              	100.00%		D3AXR9              	100.00%
Bootstrap support for Q5JEY0 as seed ortholog is 100%.
Bootstrap support for D3AXR9 as seed ortholog is 100%.

Group of orthologs #44. Best score 279 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:279 P.pallidum:279

Q5JEP3              	100.00%		D3B072              	100.00%
Bootstrap support for Q5JEP3 as seed ortholog is 100%.
Bootstrap support for D3B072 as seed ortholog is 100%.

Group of orthologs #45. Best score 276 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:276 P.pallidum:276

O59650              	100.00%		D3B061              	100.00%
Bootstrap support for O59650 as seed ortholog is 100%.
Bootstrap support for D3B061 as seed ortholog is 100%.

Group of orthologs #46. Best score 275 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:275 P.pallidum:275

Q76I93              	100.00%		D3B0M1              	100.00%
Bootstrap support for Q76I93 as seed ortholog is 100%.
Bootstrap support for D3B0M1 as seed ortholog is 100%.

Group of orthologs #47. Best score 269 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:269 P.pallidum:62

Q5JHC1              	100.00%		D3BC91              	100.00%
Bootstrap support for Q5JHC1 as seed ortholog is 100%.
Bootstrap support for D3BC91 as seed ortholog is 91%.

Group of orthologs #48. Best score 266 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:266 P.pallidum:212

Q5JJE8              	100.00%		D3AWX0              	100.00%
Bootstrap support for Q5JJE8 as seed ortholog is 100%.
Bootstrap support for D3AWX0 as seed ortholog is 100%.

Group of orthologs #49. Best score 262 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:262 P.pallidum:262

Q5JET4              	100.00%		D3BI15              	100.00%
Bootstrap support for Q5JET4 as seed ortholog is 100%.
Bootstrap support for D3BI15 as seed ortholog is 100%.

Group of orthologs #50. Best score 259 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:259 P.pallidum:79

Q52428              	100.00%		D3BEH3              	100.00%
                    	       		D3BEG7              	5.25%
Bootstrap support for Q52428 as seed ortholog is 100%.
Bootstrap support for D3BEH3 as seed ortholog is 97%.

Group of orthologs #51. Best score 253 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:253 P.pallidum:253

Q5JGK6              	100.00%		D3AYV1              	100.00%
Bootstrap support for Q5JGK6 as seed ortholog is 100%.
Bootstrap support for D3AYV1 as seed ortholog is 100%.

Group of orthologs #52. Best score 253 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:253 P.pallidum:6

Q5JFZ6              	100.00%		D3BK58              	100.00%
Bootstrap support for Q5JFZ6 as seed ortholog is 100%.
Bootstrap support for D3BK58 as seed ortholog is 57%.
Alternative seed ortholog is D3BMB3 (6 bits away from this cluster)

Group of orthologs #53. Best score 252 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:252 P.pallidum:150

Q5JD92              	100.00%		D3AZ62              	100.00%
Bootstrap support for Q5JD92 as seed ortholog is 100%.
Bootstrap support for D3AZ62 as seed ortholog is 99%.

Group of orthologs #54. Best score 250 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:250 P.pallidum:80

Q9HHC4              	100.00%		D3BUQ9              	100.00%
Bootstrap support for Q9HHC4 as seed ortholog is 100%.
Bootstrap support for D3BUQ9 as seed ortholog is 95%.

Group of orthologs #55. Best score 247 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:247 P.pallidum:247

Q5JF63              	100.00%		D3BAK8              	100.00%
Bootstrap support for Q5JF63 as seed ortholog is 100%.
Bootstrap support for D3BAK8 as seed ortholog is 100%.

Group of orthologs #56. Best score 242 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:242 P.pallidum:242

Q6F494              	100.00%		D3BHN9              	100.00%
Bootstrap support for Q6F494 as seed ortholog is 100%.
Bootstrap support for D3BHN9 as seed ortholog is 100%.

Group of orthologs #57. Best score 239 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:239 P.pallidum:239

Q5JI21              	100.00%		D3BD73              	100.00%
Bootstrap support for Q5JI21 as seed ortholog is 100%.
Bootstrap support for D3BD73 as seed ortholog is 100%.

Group of orthologs #58. Best score 238 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:238 P.pallidum:179

Q68BJ6              	100.00%		D3AVZ8              	100.00%
Q68BJ7              	17.65%		
Q6I7B6              	12.97%		
Bootstrap support for Q68BJ6 as seed ortholog is 100%.
Bootstrap support for D3AVZ8 as seed ortholog is 99%.

Group of orthologs #59. Best score 238 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:238 P.pallidum:238

Q5JHC6              	100.00%		D3B5A9              	100.00%
Bootstrap support for Q5JHC6 as seed ortholog is 100%.
Bootstrap support for D3B5A9 as seed ortholog is 100%.

Group of orthologs #60. Best score 237 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:237 P.pallidum:237

Q5JGN0              	100.00%		D3BN56              	100.00%
Bootstrap support for Q5JGN0 as seed ortholog is 100%.
Bootstrap support for D3BN56 as seed ortholog is 100%.

Group of orthologs #61. Best score 236 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:236 P.pallidum:236

Q76KA7              	100.00%		D3BMN8              	100.00%
Bootstrap support for Q76KA7 as seed ortholog is 100%.
Bootstrap support for D3BMN8 as seed ortholog is 100%.

Group of orthologs #62. Best score 233 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:233 P.pallidum:104

Q5JER0              	100.00%		D3BNF2              	100.00%
Bootstrap support for Q5JER0 as seed ortholog is 100%.
Bootstrap support for D3BNF2 as seed ortholog is 99%.

Group of orthologs #63. Best score 225 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:107 P.pallidum:153

Q5JF43              	100.00%		D3BL61              	100.00%
Bootstrap support for Q5JF43 as seed ortholog is 99%.
Bootstrap support for D3BL61 as seed ortholog is 100%.

Group of orthologs #64. Best score 223 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:223 P.pallidum:223

Q5JH37              	100.00%		D3B6X7              	100.00%
Bootstrap support for Q5JH37 as seed ortholog is 100%.
Bootstrap support for D3B6X7 as seed ortholog is 100%.

Group of orthologs #65. Best score 223 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:223 P.pallidum:223

Q5JDH2              	100.00%		D3BFD7              	100.00%
Bootstrap support for Q5JDH2 as seed ortholog is 100%.
Bootstrap support for D3BFD7 as seed ortholog is 100%.

Group of orthologs #66. Best score 222 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:222 P.pallidum:222

Q5JJ43              	100.00%		D3BIF3              	100.00%
Bootstrap support for Q5JJ43 as seed ortholog is 100%.
Bootstrap support for D3BIF3 as seed ortholog is 100%.

Group of orthologs #67. Best score 221 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:221 P.pallidum:99

Q5JH16              	100.00%		D3B344              	100.00%
Bootstrap support for Q5JH16 as seed ortholog is 100%.
Bootstrap support for D3B344 as seed ortholog is 98%.

Group of orthologs #68. Best score 220 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:220 P.pallidum:220

Q5JDJ0              	100.00%		D3BK20              	100.00%
Bootstrap support for Q5JDJ0 as seed ortholog is 100%.
Bootstrap support for D3BK20 as seed ortholog is 100%.

Group of orthologs #69. Best score 218 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:218 P.pallidum:77

Q5JEZ2              	100.00%		D3BRT8              	100.00%
Q5JF48              	9.26%		
Bootstrap support for Q5JEZ2 as seed ortholog is 100%.
Bootstrap support for D3BRT8 as seed ortholog is 99%.

Group of orthologs #70. Best score 218 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:218 P.pallidum:218

Q76KA8              	100.00%		D3BCX3              	100.00%
Bootstrap support for Q76KA8 as seed ortholog is 100%.
Bootstrap support for D3BCX3 as seed ortholog is 100%.

Group of orthologs #71. Best score 215 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:215 P.pallidum:145

Q5JGQ7              	100.00%		D3BE82              	100.00%
                    	       		D3BMS6              	41.76%
Bootstrap support for Q5JGQ7 as seed ortholog is 100%.
Bootstrap support for D3BE82 as seed ortholog is 99%.

Group of orthologs #72. Best score 215 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:67 P.pallidum:215

Q5JHX4              	100.00%		D3BBH0              	100.00%
Bootstrap support for Q5JHX4 as seed ortholog is 68%.
Alternative seed ortholog is Q5JIK3 (67 bits away from this cluster)
Bootstrap support for D3BBH0 as seed ortholog is 100%.

Group of orthologs #73. Best score 214 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:214 P.pallidum:214

Q5JJ82              	100.00%		D3B6F1              	100.00%
                    	       		D3BMM3              	10.69%
Bootstrap support for Q5JJ82 as seed ortholog is 100%.
Bootstrap support for D3B6F1 as seed ortholog is 100%.

Group of orthologs #74. Best score 214 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:214 P.pallidum:214

Q5JH48              	100.00%		D3BFM3              	100.00%
                    	       		D3BCH9              	12.39%
Bootstrap support for Q5JH48 as seed ortholog is 100%.
Bootstrap support for D3BFM3 as seed ortholog is 100%.

Group of orthologs #75. Best score 213 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:213 P.pallidum:122

Q5JEP5              	100.00%		D3B8B3              	100.00%
Bootstrap support for Q5JEP5 as seed ortholog is 100%.
Bootstrap support for D3B8B3 as seed ortholog is 99%.

Group of orthologs #76. Best score 212 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:212 P.pallidum:44

Q5JGC4              	100.00%		D3BSP0              	100.00%
Bootstrap support for Q5JGC4 as seed ortholog is 100%.
Bootstrap support for D3BSP0 as seed ortholog is 89%.

Group of orthologs #77. Best score 211 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:211 P.pallidum:44

Q5JHP3              	100.00%		D3B5Y1              	100.00%
Bootstrap support for Q5JHP3 as seed ortholog is 100%.
Bootstrap support for D3B5Y1 as seed ortholog is 87%.

Group of orthologs #78. Best score 210 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:210 P.pallidum:210

Q5JD37              	100.00%		D3BPJ2              	100.00%
Bootstrap support for Q5JD37 as seed ortholog is 100%.
Bootstrap support for D3BPJ2 as seed ortholog is 100%.

Group of orthologs #79. Best score 208 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:208 P.pallidum:208

Q5JFE7              	100.00%		D3B2J9              	100.00%
Bootstrap support for Q5JFE7 as seed ortholog is 100%.
Bootstrap support for D3B2J9 as seed ortholog is 100%.

Group of orthologs #80. Best score 208 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:208 P.pallidum:15

Q5JG59              	100.00%		D3BER4              	100.00%
Bootstrap support for Q5JG59 as seed ortholog is 100%.
Bootstrap support for D3BER4 as seed ortholog is 64%.
Alternative seed ortholog is D3BRC2 (15 bits away from this cluster)

Group of orthologs #81. Best score 206 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:206 P.pallidum:206

Q5JDE9              	100.00%		D3BIE7              	100.00%
Bootstrap support for Q5JDE9 as seed ortholog is 100%.
Bootstrap support for D3BIE7 as seed ortholog is 100%.

Group of orthologs #82. Best score 205 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:205 P.pallidum:6

Q5JFW3              	100.00%		D3B161              	100.00%
Bootstrap support for Q5JFW3 as seed ortholog is 100%.
Bootstrap support for D3B161 as seed ortholog is 54%.
Alternative seed ortholog is D3BGV8 (6 bits away from this cluster)

Group of orthologs #83. Best score 205 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:205 P.pallidum:83

Q5JGH7              	100.00%		D3BJG8              	100.00%
Bootstrap support for Q5JGH7 as seed ortholog is 100%.
Bootstrap support for D3BJG8 as seed ortholog is 93%.

Group of orthologs #84. Best score 203 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:203 P.pallidum:203

Q5JIL7              	100.00%		D3B824              	100.00%
                    	       		D3B7Q7              	10.18%
Bootstrap support for Q5JIL7 as seed ortholog is 100%.
Bootstrap support for D3B824 as seed ortholog is 100%.

Group of orthologs #85. Best score 201 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:201 P.pallidum:201

Q5JDG3              	100.00%		D3B0J0              	100.00%
Bootstrap support for Q5JDG3 as seed ortholog is 100%.
Bootstrap support for D3B0J0 as seed ortholog is 100%.

Group of orthologs #86. Best score 200 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:200 P.pallidum:200

Q5JF06              	100.00%		D3B2S5              	100.00%
                    	       		D3BUR5              	63.56%
Bootstrap support for Q5JF06 as seed ortholog is 100%.
Bootstrap support for D3B2S5 as seed ortholog is 100%.

Group of orthologs #87. Best score 200 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:27 P.pallidum:200

Q5JI15              	100.00%		D3BMN0              	100.00%
Bootstrap support for Q5JI15 as seed ortholog is 77%.
Bootstrap support for D3BMN0 as seed ortholog is 100%.

Group of orthologs #88. Best score 200 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:200 P.pallidum:200

Q5JIE6              	100.00%		D3BTQ4              	100.00%
Bootstrap support for Q5JIE6 as seed ortholog is 100%.
Bootstrap support for D3BTQ4 as seed ortholog is 100%.

Group of orthologs #89. Best score 198 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:198 P.pallidum:78

Q5JFN0              	100.00%		D3BCL2              	100.00%
                    	       		D3AY91              	23.38%
Bootstrap support for Q5JFN0 as seed ortholog is 100%.
Bootstrap support for D3BCL2 as seed ortholog is 96%.

Group of orthologs #90. Best score 198 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:198 P.pallidum:37

Q5JIM2              	100.00%		D3B6G4              	100.00%
Bootstrap support for Q5JIM2 as seed ortholog is 100%.
Bootstrap support for D3B6G4 as seed ortholog is 79%.

Group of orthologs #91. Best score 197 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:197 P.pallidum:197

Q5JE24              	100.00%		D3BRX9              	100.00%
Bootstrap support for Q5JE24 as seed ortholog is 100%.
Bootstrap support for D3BRX9 as seed ortholog is 100%.

Group of orthologs #92. Best score 195 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:195 P.pallidum:195

Q5JFV8              	100.00%		D3BK71              	100.00%
Bootstrap support for Q5JFV8 as seed ortholog is 100%.
Bootstrap support for D3BK71 as seed ortholog is 100%.

Group of orthologs #93. Best score 192 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:192 P.pallidum:192

Q5JFN1              	100.00%		D3B7T8              	100.00%
Bootstrap support for Q5JFN1 as seed ortholog is 100%.
Bootstrap support for D3B7T8 as seed ortholog is 100%.

Group of orthologs #94. Best score 189 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:189 P.pallidum:189

Q5JG03              	100.00%		D3BM29              	100.00%
Bootstrap support for Q5JG03 as seed ortholog is 100%.
Bootstrap support for D3BM29 as seed ortholog is 100%.

Group of orthologs #95. Best score 188 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:69 P.pallidum:188

Q5JDD8              	100.00%		D3B280              	100.00%
                    	       		D3BV53              	22.41%
Bootstrap support for Q5JDD8 as seed ortholog is 98%.
Bootstrap support for D3B280 as seed ortholog is 100%.

Group of orthologs #96. Best score 188 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:188 P.pallidum:3

Q5JIU9              	100.00%		D3BBN6              	100.00%
Bootstrap support for Q5JIU9 as seed ortholog is 100%.
Bootstrap support for D3BBN6 as seed ortholog is 54%.
Alternative seed ortholog is D3BSE8 (3 bits away from this cluster)

Group of orthologs #97. Best score 188 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:62 P.pallidum:106

Q5JI97              	100.00%		D3BCL5              	100.00%
Bootstrap support for Q5JI97 as seed ortholog is 92%.
Bootstrap support for D3BCL5 as seed ortholog is 99%.

Group of orthologs #98. Best score 187 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:187 P.pallidum:187

Q5JIG7              	100.00%		D3BGD9              	100.00%
Bootstrap support for Q5JIG7 as seed ortholog is 100%.
Bootstrap support for D3BGD9 as seed ortholog is 100%.

Group of orthologs #99. Best score 186 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:186 P.pallidum:70

Q5JGD1              	100.00%		D3BB47              	100.00%
Bootstrap support for Q5JGD1 as seed ortholog is 100%.
Bootstrap support for D3BB47 as seed ortholog is 97%.

Group of orthologs #100. Best score 186 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:132 P.pallidum:115

Q5JIK4              	100.00%		D3BQ30              	100.00%
Bootstrap support for Q5JIK4 as seed ortholog is 99%.
Bootstrap support for D3BQ30 as seed ortholog is 99%.

Group of orthologs #101. Best score 185 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:185 P.pallidum:185

Q5JIB3              	100.00%		D3AVI8              	100.00%
Bootstrap support for Q5JIB3 as seed ortholog is 100%.
Bootstrap support for D3AVI8 as seed ortholog is 100%.

Group of orthologs #102. Best score 183 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:137 P.pallidum:94

Q5JF51              	100.00%		D3AWX8              	100.00%
Q5JHU0              	27.61%		
Bootstrap support for Q5JF51 as seed ortholog is 99%.
Bootstrap support for D3AWX8 as seed ortholog is 98%.

Group of orthologs #103. Best score 183 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:183 P.pallidum:97

Q5JH24              	100.00%		D3BR60              	100.00%
Bootstrap support for Q5JH24 as seed ortholog is 100%.
Bootstrap support for D3BR60 as seed ortholog is 97%.

Group of orthologs #104. Best score 182 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:182 P.pallidum:182

Q5JFP1              	100.00%		D3BJB3              	100.00%
Bootstrap support for Q5JFP1 as seed ortholog is 100%.
Bootstrap support for D3BJB3 as seed ortholog is 100%.

Group of orthologs #105. Best score 178 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:178 P.pallidum:85

Q5JIQ0              	100.00%		D3BAC3              	100.00%
Bootstrap support for Q5JIQ0 as seed ortholog is 100%.
Bootstrap support for D3BAC3 as seed ortholog is 98%.

Group of orthologs #106. Best score 177 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:177 P.pallidum:177

P58109              	100.00%		D3BMU1              	100.00%
Q5JGN1              	54.55%		
Bootstrap support for P58109 as seed ortholog is 100%.
Bootstrap support for D3BMU1 as seed ortholog is 100%.

Group of orthologs #107. Best score 177 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:177 P.pallidum:13

Q5JEW1              	100.00%		D3BQM5              	100.00%
Q5JGG6              	16.99%		
Bootstrap support for Q5JEW1 as seed ortholog is 100%.
Bootstrap support for D3BQM5 as seed ortholog is 61%.
Alternative seed ortholog is D3BGV8 (13 bits away from this cluster)

Group of orthologs #108. Best score 173 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:173 P.pallidum:71

Q5JIR6              	100.00%		D3BKA2              	100.00%
Bootstrap support for Q5JIR6 as seed ortholog is 100%.
Bootstrap support for D3BKA2 as seed ortholog is 99%.

Group of orthologs #109. Best score 172 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:172 P.pallidum:172

Q5JGM9              	100.00%		D3BJV5              	100.00%
Q5JF26              	18.08%		
Bootstrap support for Q5JGM9 as seed ortholog is 100%.
Bootstrap support for D3BJV5 as seed ortholog is 100%.

Group of orthologs #110. Best score 170 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:170 P.pallidum:50

Q5JE76              	100.00%		D3AZ75              	100.00%
                    	       		D3BUY8              	11.17%
                    	       		D3BA00              	10.06%
Bootstrap support for Q5JE76 as seed ortholog is 100%.
Bootstrap support for D3AZ75 as seed ortholog is 92%.

Group of orthologs #111. Best score 170 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:170 P.pallidum:170

Q5JFG9              	100.00%		D3BHT0              	100.00%
Bootstrap support for Q5JFG9 as seed ortholog is 100%.
Bootstrap support for D3BHT0 as seed ortholog is 100%.

Group of orthologs #112. Best score 169 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:169 P.pallidum:169

Q5JDV8              	100.00%		D3AVG7              	100.00%
Q5JIM8              	9.76%		
Bootstrap support for Q5JDV8 as seed ortholog is 100%.
Bootstrap support for D3AVG7 as seed ortholog is 100%.

Group of orthologs #113. Best score 168 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:168 P.pallidum:168

O08467              	100.00%		D3BM59              	100.00%
Bootstrap support for O08467 as seed ortholog is 100%.
Bootstrap support for D3BM59 as seed ortholog is 100%.

Group of orthologs #114. Best score 167 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:89 P.pallidum:37

Q5JE21              	100.00%		D3B9D9              	100.00%
Bootstrap support for Q5JE21 as seed ortholog is 98%.
Bootstrap support for D3B9D9 as seed ortholog is 79%.

Group of orthologs #115. Best score 166 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:166 P.pallidum:63

Q5JEW7              	100.00%		D3B5B4              	100.00%
Bootstrap support for Q5JEW7 as seed ortholog is 100%.
Bootstrap support for D3B5B4 as seed ortholog is 95%.

Group of orthologs #116. Best score 166 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:166 P.pallidum:91

Q5JHT1              	100.00%		D3BK97              	100.00%
Bootstrap support for Q5JHT1 as seed ortholog is 100%.
Bootstrap support for D3BK97 as seed ortholog is 98%.

Group of orthologs #117. Best score 165 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:165 P.pallidum:165

Q5JI77              	100.00%		D3BT21              	100.00%
Bootstrap support for Q5JI77 as seed ortholog is 100%.
Bootstrap support for D3BT21 as seed ortholog is 100%.

Group of orthologs #118. Best score 164 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:164 P.pallidum:164

Q5JJF3              	100.00%		D3B615              	100.00%
Bootstrap support for Q5JJF3 as seed ortholog is 100%.
Bootstrap support for D3B615 as seed ortholog is 100%.

Group of orthologs #119. Best score 162 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:162 P.pallidum:100

Q5JCX7              	100.00%		D3B7E2              	100.00%
Q5JGS4              	10.00%		
Bootstrap support for Q5JCX7 as seed ortholog is 100%.
Bootstrap support for D3B7E2 as seed ortholog is 99%.

Group of orthologs #120. Best score 157 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:157 P.pallidum:157

Q5JFR0              	100.00%		D3BIB6              	100.00%
                    	       		D3BIB9              	5.97%
Bootstrap support for Q5JFR0 as seed ortholog is 100%.
Bootstrap support for D3BIB6 as seed ortholog is 100%.

Group of orthologs #121. Best score 157 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:157 P.pallidum:157

Q5JHX1              	100.00%		D3BAC0              	100.00%
Bootstrap support for Q5JHX1 as seed ortholog is 100%.
Bootstrap support for D3BAC0 as seed ortholog is 100%.

Group of orthologs #122. Best score 157 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:157 P.pallidum:157

Q5JJG1              	100.00%		D3BTV2              	100.00%
Bootstrap support for Q5JJG1 as seed ortholog is 100%.
Bootstrap support for D3BTV2 as seed ortholog is 100%.

Group of orthologs #123. Best score 155 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:155 P.pallidum:155

Q5JDI0              	100.00%		D3BJC7              	100.00%
Bootstrap support for Q5JDI0 as seed ortholog is 100%.
Bootstrap support for D3BJC7 as seed ortholog is 100%.

Group of orthologs #124. Best score 153 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:153 P.pallidum:92

Q5JFM8              	100.00%		D3AWU6              	100.00%
                    	       		D3AWU5              	36.04%
Bootstrap support for Q5JFM8 as seed ortholog is 100%.
Bootstrap support for D3AWU6 as seed ortholog is 97%.

Group of orthologs #125. Best score 153 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:153 P.pallidum:39

Q5JIR7              	100.00%		D3BAF1              	100.00%
Bootstrap support for Q5JIR7 as seed ortholog is 100%.
Bootstrap support for D3BAF1 as seed ortholog is 89%.

Group of orthologs #126. Best score 152 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:152 P.pallidum:152

Q5JJG8              	100.00%		D3B6G8              	100.00%
Bootstrap support for Q5JJG8 as seed ortholog is 100%.
Bootstrap support for D3B6G8 as seed ortholog is 100%.

Group of orthologs #127. Best score 151 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:151 P.pallidum:62

Q5JI54              	100.00%		D3BI40              	100.00%
Bootstrap support for Q5JI54 as seed ortholog is 100%.
Bootstrap support for D3BI40 as seed ortholog is 96%.

Group of orthologs #128. Best score 149 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:149 P.pallidum:149

Q5JH96              	100.00%		D3BKQ8              	100.00%
                    	       		D3B7J9              	5.00%
Bootstrap support for Q5JH96 as seed ortholog is 100%.
Bootstrap support for D3BKQ8 as seed ortholog is 100%.

Group of orthologs #129. Best score 148 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:148 P.pallidum:148

Q5JH26              	100.00%		D3BKB6              	100.00%
Bootstrap support for Q5JH26 as seed ortholog is 100%.
Bootstrap support for D3BKB6 as seed ortholog is 100%.

Group of orthologs #130. Best score 147 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:147 P.pallidum:147

Q5JIB9              	100.00%		D3AX31              	100.00%
Bootstrap support for Q5JIB9 as seed ortholog is 100%.
Bootstrap support for D3AX31 as seed ortholog is 100%.

Group of orthologs #131. Best score 147 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:147 P.pallidum:147

Q5JJD2              	100.00%		D3BRK4              	100.00%
Bootstrap support for Q5JJD2 as seed ortholog is 100%.
Bootstrap support for D3BRK4 as seed ortholog is 100%.

Group of orthologs #132. Best score 146 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:146 P.pallidum:18

Q5JEZ9              	100.00%		D3AW75              	100.00%
Q5JH45              	5.95%		D3BVI8              	13.18%
                    	       		D3BQP1              	10.80%
                    	       		D3BBJ2              	9.43%
Bootstrap support for Q5JEZ9 as seed ortholog is 100%.
Bootstrap support for D3AW75 as seed ortholog is 36%.
Alternative seed ortholog is D3B4X1 (18 bits away from this cluster)

Group of orthologs #133. Best score 143 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:143 P.pallidum:143

Q5JJF1              	100.00%		D3B1K3              	100.00%
Bootstrap support for Q5JJF1 as seed ortholog is 100%.
Bootstrap support for D3B1K3 as seed ortholog is 100%.

Group of orthologs #134. Best score 143 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:66 P.pallidum:143

Q5JEM4              	100.00%		D3B7P8              	100.00%
Bootstrap support for Q5JEM4 as seed ortholog is 98%.
Bootstrap support for D3B7P8 as seed ortholog is 100%.

Group of orthologs #135. Best score 143 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:143 P.pallidum:143

Q5JE20              	100.00%		D3BV90              	100.00%
Bootstrap support for Q5JE20 as seed ortholog is 100%.
Bootstrap support for D3BV90 as seed ortholog is 100%.

Group of orthologs #136. Best score 141 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:141 P.pallidum:141

Q5JJG6              	100.00%		D3BBQ8              	100.00%
Bootstrap support for Q5JJG6 as seed ortholog is 100%.
Bootstrap support for D3BBQ8 as seed ortholog is 100%.

Group of orthologs #137. Best score 139 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:139 P.pallidum:67

Q5JH68              	100.00%		D3AY59              	100.00%
                    	       		D3BMQ2              	5.61%
Bootstrap support for Q5JH68 as seed ortholog is 100%.
Bootstrap support for D3AY59 as seed ortholog is 99%.

Group of orthologs #138. Best score 139 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:139 P.pallidum:139

Q5JHS7              	100.00%		D3BDY0              	100.00%
Bootstrap support for Q5JHS7 as seed ortholog is 100%.
Bootstrap support for D3BDY0 as seed ortholog is 100%.

Group of orthologs #139. Best score 138 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:138 P.pallidum:138

Q5JGJ4              	100.00%		D3BBQ0              	100.00%
Bootstrap support for Q5JGJ4 as seed ortholog is 100%.
Bootstrap support for D3BBQ0 as seed ortholog is 100%.

Group of orthologs #140. Best score 138 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:138 P.pallidum:15

Q5JIH2              	100.00%		D3BGD2              	100.00%
Bootstrap support for Q5JIH2 as seed ortholog is 100%.
Bootstrap support for D3BGD2 as seed ortholog is 51%.
Alternative seed ortholog is D3BTG9 (15 bits away from this cluster)

Group of orthologs #141. Best score 137 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:137 P.pallidum:75

Q5JGR7              	100.00%		D3BJU6              	100.00%
                    	       		D3BL27              	26.19%
Bootstrap support for Q5JGR7 as seed ortholog is 100%.
Bootstrap support for D3BJU6 as seed ortholog is 99%.

Group of orthologs #142. Best score 136 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:136 P.pallidum:136

Q5JGC8              	100.00%		D3BMT5              	100.00%
                    	       		D3AY33              	36.60%
Bootstrap support for Q5JGC8 as seed ortholog is 100%.
Bootstrap support for D3BMT5 as seed ortholog is 100%.

Group of orthologs #143. Best score 135 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:135 P.pallidum:135

Q5JIA2              	100.00%		D3B3X6              	100.00%
Bootstrap support for Q5JIA2 as seed ortholog is 100%.
Bootstrap support for D3B3X6 as seed ortholog is 100%.

Group of orthologs #144. Best score 134 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:134 P.pallidum:134

Q5JIM4              	100.00%		D3BMQ3              	100.00%
Q5JIM5              	29.34%		D3BMX2              	16.44%
Q5JI36              	8.68%		
Bootstrap support for Q5JIM4 as seed ortholog is 100%.
Bootstrap support for D3BMQ3 as seed ortholog is 100%.

Group of orthologs #145. Best score 132 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:132 P.pallidum:14

Q5JF69              	100.00%		D3BGA0              	100.00%
                    	       		D3BG99              	57.14%
                    	       		D3BB40              	40.97%
Bootstrap support for Q5JF69 as seed ortholog is 100%.
Bootstrap support for D3BGA0 as seed ortholog is 62%.
Alternative seed ortholog is D3B2N2 (14 bits away from this cluster)

Group of orthologs #146. Best score 132 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:132 P.pallidum:40

Q5JIX4              	100.00%		D3BAQ8              	100.00%
Bootstrap support for Q5JIX4 as seed ortholog is 100%.
Bootstrap support for D3BAQ8 as seed ortholog is 88%.

Group of orthologs #147. Best score 130 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:130 P.pallidum:56

Q5JEX2              	100.00%		D3BLV1              	100.00%
Bootstrap support for Q5JEX2 as seed ortholog is 100%.
Bootstrap support for D3BLV1 as seed ortholog is 97%.

Group of orthologs #148. Best score 129 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:129 P.pallidum:64

Q5JH42              	100.00%		D3B632              	100.00%
Q5JIB6              	17.35%		
Bootstrap support for Q5JH42 as seed ortholog is 100%.
Bootstrap support for D3B632 as seed ortholog is 93%.

Group of orthologs #149. Best score 127 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:127 P.pallidum:127

Q5JH18              	100.00%		D3BVE1              	100.00%
                    	       		D3AYA7              	44.40%
Bootstrap support for Q5JH18 as seed ortholog is 100%.
Bootstrap support for D3BVE1 as seed ortholog is 100%.

Group of orthologs #150. Best score 127 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:127 P.pallidum:127

Q5JE04              	100.00%		D3AYQ3              	100.00%
Bootstrap support for Q5JE04 as seed ortholog is 100%.
Bootstrap support for D3AYQ3 as seed ortholog is 100%.

Group of orthologs #151. Best score 127 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:127 P.pallidum:82

Q5JH36              	100.00%		D3AX76              	100.00%
Bootstrap support for Q5JH36 as seed ortholog is 100%.
Bootstrap support for D3AX76 as seed ortholog is 99%.

Group of orthologs #152. Best score 126 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:60 P.pallidum:126

Q5JGT2              	100.00%		D3BF15              	100.00%
Q5JI45              	38.44%		
Bootstrap support for Q5JGT2 as seed ortholog is 90%.
Bootstrap support for D3BF15 as seed ortholog is 100%.

Group of orthologs #153. Best score 124 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:124 P.pallidum:124

Q5JJF4              	100.00%		D3AXW3              	100.00%
Bootstrap support for Q5JJF4 as seed ortholog is 100%.
Bootstrap support for D3AXW3 as seed ortholog is 100%.

Group of orthologs #154. Best score 124 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:70 P.pallidum:124

Q8X268              	100.00%		D3BMX7              	100.00%
Bootstrap support for Q8X268 as seed ortholog is 94%.
Bootstrap support for D3BMX7 as seed ortholog is 100%.

Group of orthologs #155. Best score 124 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:124 P.pallidum:51

Q5JIT6              	100.00%		D3BU77              	100.00%
Bootstrap support for Q5JIT6 as seed ortholog is 100%.
Bootstrap support for D3BU77 as seed ortholog is 95%.

Group of orthologs #156. Best score 123 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:123 P.pallidum:123

Q5JJ59              	100.00%		D3BE64              	100.00%
Q5JID9              	6.16%		
Bootstrap support for Q5JJ59 as seed ortholog is 100%.
Bootstrap support for D3BE64 as seed ortholog is 100%.

Group of orthologs #157. Best score 123 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:123 P.pallidum:123

Q5JJG4              	100.00%		D3BMQ1              	100.00%
Bootstrap support for Q5JJG4 as seed ortholog is 100%.
Bootstrap support for D3BMQ1 as seed ortholog is 100%.

Group of orthologs #158. Best score 122 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:122 P.pallidum:122

Q5JDQ6              	100.00%		D3BCA7              	100.00%
Q5JHC8              	15.26%		
Bootstrap support for Q5JDQ6 as seed ortholog is 100%.
Bootstrap support for D3BCA7 as seed ortholog is 100%.

Group of orthologs #159. Best score 121 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:121 P.pallidum:121

Q5JI74              	100.00%		D3B508              	100.00%
Bootstrap support for Q5JI74 as seed ortholog is 100%.
Bootstrap support for D3B508 as seed ortholog is 100%.

Group of orthologs #160. Best score 120 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:120 P.pallidum:120

Q5JJ91              	100.00%		D3BLP5              	100.00%
                    	       		D3B996              	19.02%
Bootstrap support for Q5JJ91 as seed ortholog is 100%.
Bootstrap support for D3BLP5 as seed ortholog is 100%.

Group of orthologs #161. Best score 119 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:119 P.pallidum:41

Q5JIE4              	100.00%		D3BCT5              	100.00%
                    	       		D3BE81              	59.61%
Bootstrap support for Q5JIE4 as seed ortholog is 100%.
Bootstrap support for D3BCT5 as seed ortholog is 86%.

Group of orthologs #162. Best score 119 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:119 P.pallidum:119

Q5JDI4              	100.00%		D3AWU9              	100.00%
Bootstrap support for Q5JDI4 as seed ortholog is 100%.
Bootstrap support for D3AWU9 as seed ortholog is 100%.

Group of orthologs #163. Best score 118 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:118 P.pallidum:118

Q5JIF4              	100.00%		D3B3Z0              	100.00%
Bootstrap support for Q5JIF4 as seed ortholog is 100%.
Bootstrap support for D3B3Z0 as seed ortholog is 100%.

Group of orthologs #164. Best score 118 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:118 P.pallidum:118

Q5JDH5              	100.00%		D3BBF0              	100.00%
Bootstrap support for Q5JDH5 as seed ortholog is 100%.
Bootstrap support for D3BBF0 as seed ortholog is 100%.

Group of orthologs #165. Best score 118 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:118 P.pallidum:118

Q5JIP8              	100.00%		D3BN16              	100.00%
Bootstrap support for Q5JIP8 as seed ortholog is 100%.
Bootstrap support for D3BN16 as seed ortholog is 100%.

Group of orthologs #166. Best score 117 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:12 P.pallidum:117

Q5JGG0              	100.00%		D3BQU8              	100.00%
Bootstrap support for Q5JGG0 as seed ortholog is 71%.
Alternative seed ortholog is Q5JHU7 (12 bits away from this cluster)
Bootstrap support for D3BQU8 as seed ortholog is 100%.

Group of orthologs #167. Best score 116 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:116 P.pallidum:116

Q5JI34              	100.00%		D3B6W9              	100.00%
                    	       		D3BAX3              	56.01%
                    	       		D3AZC2              	18.74%
                    	       		D3BBK0              	14.44%
Bootstrap support for Q5JI34 as seed ortholog is 100%.
Bootstrap support for D3B6W9 as seed ortholog is 100%.

Group of orthologs #168. Best score 116 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:116 P.pallidum:22

Q5JF30              	100.00%		D3BFU9              	100.00%
                    	       		D3BFU8              	24.39%
Bootstrap support for Q5JF30 as seed ortholog is 100%.
Bootstrap support for D3BFU9 as seed ortholog is 80%.

Group of orthologs #169. Best score 116 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:116 P.pallidum:116

Q5JGT4              	100.00%		D3BKY4              	100.00%
Bootstrap support for Q5JGT4 as seed ortholog is 100%.
Bootstrap support for D3BKY4 as seed ortholog is 100%.

Group of orthologs #170. Best score 116 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:116 P.pallidum:116

Q5JJ50              	100.00%		D3BJX1              	100.00%
Bootstrap support for Q5JJ50 as seed ortholog is 100%.
Bootstrap support for D3BJX1 as seed ortholog is 100%.

Group of orthologs #171. Best score 116 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:116 P.pallidum:116

Q5JJF8              	100.00%		D3BMX5              	100.00%
Bootstrap support for Q5JJF8 as seed ortholog is 100%.
Bootstrap support for D3BMX5 as seed ortholog is 100%.

Group of orthologs #172. Best score 115 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:115 P.pallidum:115

Q5JEZ6              	100.00%		D3AWF3              	100.00%
Bootstrap support for Q5JEZ6 as seed ortholog is 100%.
Bootstrap support for D3AWF3 as seed ortholog is 100%.

Group of orthologs #173. Best score 115 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:115 P.pallidum:115

Q5JFJ9              	100.00%		D3B1V3              	100.00%
Bootstrap support for Q5JFJ9 as seed ortholog is 100%.
Bootstrap support for D3B1V3 as seed ortholog is 100%.

Group of orthologs #174. Best score 115 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:115 P.pallidum:27

Q5JJC1              	100.00%		D3B760              	100.00%
Bootstrap support for Q5JJC1 as seed ortholog is 100%.
Bootstrap support for D3B760 as seed ortholog is 79%.

Group of orthologs #175. Best score 115 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:115 P.pallidum:115

Q5JJG0              	100.00%		D3BCZ8              	100.00%
Bootstrap support for Q5JJG0 as seed ortholog is 100%.
Bootstrap support for D3BCZ8 as seed ortholog is 100%.

Group of orthologs #176. Best score 114 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:114 P.pallidum:114

Q5JDH3              	100.00%		D3B437              	100.00%
Bootstrap support for Q5JDH3 as seed ortholog is 100%.
Bootstrap support for D3B437 as seed ortholog is 100%.

Group of orthologs #177. Best score 114 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:114 P.pallidum:114

Q5JIR1              	100.00%		D3BCA4              	100.00%
Bootstrap support for Q5JIR1 as seed ortholog is 100%.
Bootstrap support for D3BCA4 as seed ortholog is 100%.

Group of orthologs #178. Best score 113 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:113 P.pallidum:113

Q5JF27              	100.00%		D3BVI7              	100.00%
Q5JFZ0              	12.15%		
Bootstrap support for Q5JF27 as seed ortholog is 100%.
Bootstrap support for D3BVI7 as seed ortholog is 100%.

Group of orthologs #179. Best score 113 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:113 P.pallidum:35

Q5JIA1              	100.00%		D3B3M9              	100.00%
Bootstrap support for Q5JIA1 as seed ortholog is 100%.
Bootstrap support for D3B3M9 as seed ortholog is 88%.

Group of orthologs #180. Best score 113 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:113 P.pallidum:113

Q5JE02              	100.00%		D3BV33              	100.00%
Bootstrap support for Q5JE02 as seed ortholog is 100%.
Bootstrap support for D3BV33 as seed ortholog is 100%.

Group of orthologs #181. Best score 112 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:112 P.pallidum:112

Q5JJF2              	100.00%		D3BMH8              	100.00%
Bootstrap support for Q5JJF2 as seed ortholog is 100%.
Bootstrap support for D3BMH8 as seed ortholog is 100%.

Group of orthologs #182. Best score 111 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:111 P.pallidum:111

Q5JEW5              	100.00%		D3BED2              	100.00%
Bootstrap support for Q5JEW5 as seed ortholog is 100%.
Bootstrap support for D3BED2 as seed ortholog is 100%.

Group of orthologs #183. Best score 109 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:38 P.pallidum:109

Q5JF59              	100.00%		D3B0C5              	100.00%
Q5JFJ1              	37.01%		
Q5JJ54              	31.41%		
Q5JEB0              	18.34%		
Q5JG78              	15.96%		
Q5JJ96              	5.26%		
Bootstrap support for Q5JF59 as seed ortholog is 85%.
Bootstrap support for D3B0C5 as seed ortholog is 100%.

Group of orthologs #184. Best score 109 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:109 P.pallidum:109

Q5JDS2              	100.00%		D3BUD3              	100.00%
                    	       		D3BUC4              	61.79%
Bootstrap support for Q5JDS2 as seed ortholog is 100%.
Bootstrap support for D3BUD3 as seed ortholog is 100%.

Group of orthologs #185. Best score 109 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:109 P.pallidum:109

Q5JEB7              	100.00%		D3B6T6              	100.00%
Bootstrap support for Q5JEB7 as seed ortholog is 100%.
Bootstrap support for D3B6T6 as seed ortholog is 100%.

Group of orthologs #186. Best score 108 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:108 P.pallidum:108

Q5JFR2              	100.00%		D3BPW7              	100.00%
Bootstrap support for Q5JFR2 as seed ortholog is 100%.
Bootstrap support for D3BPW7 as seed ortholog is 100%.

Group of orthologs #187. Best score 108 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:108 P.pallidum:57

Q5JGE0              	100.00%		D3BTL1              	100.00%
Bootstrap support for Q5JGE0 as seed ortholog is 100%.
Bootstrap support for D3BTL1 as seed ortholog is 98%.

Group of orthologs #188. Best score 107 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:107 P.pallidum:107

Q5JG47              	100.00%		D3BCK2              	100.00%
Bootstrap support for Q5JG47 as seed ortholog is 100%.
Bootstrap support for D3BCK2 as seed ortholog is 100%.

Group of orthologs #189. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 P.pallidum:106

Q5JIE2              	100.00%		D3BIJ6              	100.00%
Q5JGQ5              	7.43%		D3BAX5              	31.63%
Q5JGQ4              	6.30%		
Bootstrap support for Q5JIE2 as seed ortholog is 100%.
Bootstrap support for D3BIJ6 as seed ortholog is 100%.

Group of orthologs #190. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 P.pallidum:28

Q5JI09              	100.00%		D3BR73              	100.00%
                    	       		D3BN01              	21.86%
                    	       		D3B0H8              	20.82%
Bootstrap support for Q5JI09 as seed ortholog is 100%.
Bootstrap support for D3BR73 as seed ortholog is 73%.
Alternative seed ortholog is D3BPZ9 (28 bits away from this cluster)

Group of orthologs #191. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 P.pallidum:22

Q5JHN1              	100.00%		D3AZD2              	100.00%
Bootstrap support for Q5JHN1 as seed ortholog is 100%.
Bootstrap support for D3AZD2 as seed ortholog is 66%.
Alternative seed ortholog is D3B5U7 (22 bits away from this cluster)

Group of orthologs #192. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 P.pallidum:106

Q5JFN2              	100.00%		D3B2R5              	100.00%
Bootstrap support for Q5JFN2 as seed ortholog is 100%.
Bootstrap support for D3B2R5 as seed ortholog is 100%.

Group of orthologs #193. Best score 106 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:106 P.pallidum:106

Q5JD58              	100.00%		D3BLV2              	100.00%
Bootstrap support for Q5JD58 as seed ortholog is 100%.
Bootstrap support for D3BLV2 as seed ortholog is 100%.

Group of orthologs #194. Best score 105 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:105 P.pallidum:105

Q5JIW7              	100.00%		D3AWD3              	100.00%
Q5JGT0              	77.41%		
Q5JHW2              	11.18%		
Q5JEX9              	7.76%		
Bootstrap support for Q5JIW7 as seed ortholog is 100%.
Bootstrap support for D3AWD3 as seed ortholog is 100%.

Group of orthologs #195. Best score 105 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:105 P.pallidum:13

Q5JI69              	100.00%		D3BG57              	100.00%
                    	       		D3B8N8              	37.99%
                    	       		D3BV73              	26.81%
Bootstrap support for Q5JI69 as seed ortholog is 100%.
Bootstrap support for D3BG57 as seed ortholog is 64%.
Alternative seed ortholog is D3B4F3 (13 bits away from this cluster)

Group of orthologs #196. Best score 104 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:104 P.pallidum:27

Q76CZ2              	100.00%		D3BB15              	100.00%
                    	       		D3BIM9              	39.55%
Bootstrap support for Q76CZ2 as seed ortholog is 100%.
Bootstrap support for D3BB15 as seed ortholog is 78%.

Group of orthologs #197. Best score 104 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:104 P.pallidum:104

Q5JDW2              	100.00%		D3BM80              	100.00%
Bootstrap support for Q5JDW2 as seed ortholog is 100%.
Bootstrap support for D3BM80 as seed ortholog is 100%.

Group of orthologs #198. Best score 103 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:103 P.pallidum:30

Q5JEU9              	100.00%		D3BLP1              	100.00%
                    	       		D3BSH6              	12.19%
Bootstrap support for Q5JEU9 as seed ortholog is 100%.
Bootstrap support for D3BLP1 as seed ortholog is 79%.

Group of orthologs #199. Best score 103 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:103 P.pallidum:103

Q5JG02              	100.00%		D3B4P2              	100.00%
Bootstrap support for Q5JG02 as seed ortholog is 100%.
Bootstrap support for D3B4P2 as seed ortholog is 100%.

Group of orthologs #200. Best score 103 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:103 P.pallidum:103

Q5JEX8              	100.00%		D3BEM8              	100.00%
Bootstrap support for Q5JEX8 as seed ortholog is 100%.
Bootstrap support for D3BEM8 as seed ortholog is 100%.

Group of orthologs #201. Best score 103 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:103 P.pallidum:103

Q5JER5              	100.00%		D3BMU4              	100.00%
Bootstrap support for Q5JER5 as seed ortholog is 100%.
Bootstrap support for D3BMU4 as seed ortholog is 100%.

Group of orthologs #202. Best score 102 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:102 P.pallidum:34

Q5JGM7              	100.00%		D3BBC8              	100.00%
Bootstrap support for Q5JGM7 as seed ortholog is 100%.
Bootstrap support for D3BBC8 as seed ortholog is 88%.

Group of orthologs #203. Best score 102 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:102 P.pallidum:102

Q5JGT7              	100.00%		D3BG91              	100.00%
Bootstrap support for Q5JGT7 as seed ortholog is 100%.
Bootstrap support for D3BG91 as seed ortholog is 100%.

Group of orthologs #204. Best score 101 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:25 P.pallidum:101

Q5JCX6              	100.00%		D3AWE7              	100.00%
Q5JIA0              	100.00%		
Bootstrap support for Q5JCX6 as seed ortholog is 53%.
Alternative seed ortholog is Q5JHF5 (25 bits away from this cluster)
Bootstrap support for Q5JIA0 as seed ortholog is 78%.
Bootstrap support for D3AWE7 as seed ortholog is 100%.

Group of orthologs #205. Best score 101 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:20 P.pallidum:10

Q5JJ98              	100.00%		D3BEQ9              	100.00%
                    	       		D3BSS6              	78.50%
Bootstrap support for Q5JJ98 as seed ortholog is 91%.
Bootstrap support for D3BEQ9 as seed ortholog is 89%.

Group of orthologs #206. Best score 101 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:27 P.pallidum:101

Q5JJ24              	100.00%		D3BEQ8              	100.00%
Bootstrap support for Q5JJ24 as seed ortholog is 80%.
Bootstrap support for D3BEQ8 as seed ortholog is 100%.

Group of orthologs #207. Best score 100 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:100 P.pallidum:100

Q5JHF7              	100.00%		D3BBK8              	100.00%
Q5JE68              	38.04%		
Bootstrap support for Q5JHF7 as seed ortholog is 100%.
Bootstrap support for D3BBK8 as seed ortholog is 100%.

Group of orthologs #208. Best score 100 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:100 P.pallidum:9

Q5JJC6              	100.00%		D3B2F2              	100.00%
Bootstrap support for Q5JJC6 as seed ortholog is 100%.
Bootstrap support for D3B2F2 as seed ortholog is 93%.

Group of orthologs #209. Best score 100 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:100 P.pallidum:100

Q5JJE2              	100.00%		D3BHJ3              	100.00%
Bootstrap support for Q5JJE2 as seed ortholog is 100%.
Bootstrap support for D3BHJ3 as seed ortholog is 100%.

Group of orthologs #210. Best score 100 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:100 P.pallidum:100

Q5JJC7              	100.00%		D3BU45              	100.00%
Bootstrap support for Q5JJC7 as seed ortholog is 100%.
Bootstrap support for D3BU45 as seed ortholog is 100%.

Group of orthologs #211. Best score 99 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:99 P.pallidum:99

Q5JIZ7              	100.00%		D3BRT1              	100.00%
                    	       		D3BV85              	9.96%
Bootstrap support for Q5JIZ7 as seed ortholog is 100%.
Bootstrap support for D3BRT1 as seed ortholog is 100%.

Group of orthologs #212. Best score 99 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:99 P.pallidum:6

Q5JDJ9              	100.00%		D3B0N9              	100.00%
Bootstrap support for Q5JDJ9 as seed ortholog is 100%.
Bootstrap support for D3B0N9 as seed ortholog is 56%.
Alternative seed ortholog is D3B6G7 (6 bits away from this cluster)

Group of orthologs #213. Best score 98 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:98 P.pallidum:98

Q5JH35              	100.00%		D3BAC7              	100.00%
Bootstrap support for Q5JH35 as seed ortholog is 100%.
Bootstrap support for D3BAC7 as seed ortholog is 100%.

Group of orthologs #214. Best score 97 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:97 P.pallidum:97

Q5JGC7              	100.00%		D3B2T4              	100.00%
Bootstrap support for Q5JGC7 as seed ortholog is 100%.
Bootstrap support for D3B2T4 as seed ortholog is 100%.

Group of orthologs #215. Best score 97 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:97 P.pallidum:97

Q5JJG7              	100.00%		D3BER0              	100.00%
Bootstrap support for Q5JJG7 as seed ortholog is 100%.
Bootstrap support for D3BER0 as seed ortholog is 100%.

Group of orthologs #216. Best score 96 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:96 P.pallidum:96

Q5JE49              	100.00%		D3AZF5              	100.00%
Bootstrap support for Q5JE49 as seed ortholog is 100%.
Bootstrap support for D3AZF5 as seed ortholog is 100%.

Group of orthologs #217. Best score 96 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:96 P.pallidum:96

Q5JJC3              	100.00%		D3BKA5              	100.00%
Bootstrap support for Q5JJC3 as seed ortholog is 100%.
Bootstrap support for D3BKA5 as seed ortholog is 100%.

Group of orthologs #218. Best score 95 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:95 P.pallidum:50

Q5JIR5              	100.00%		D3BDG0              	100.00%
Bootstrap support for Q5JIR5 as seed ortholog is 100%.
Bootstrap support for D3BDG0 as seed ortholog is 95%.

Group of orthologs #219. Best score 95 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:95 P.pallidum:95

Q5JDI6              	100.00%		D3BLP0              	100.00%
Bootstrap support for Q5JDI6 as seed ortholog is 100%.
Bootstrap support for D3BLP0 as seed ortholog is 100%.

Group of orthologs #220. Best score 95 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:95 P.pallidum:95

O52958              	100.00%		D3BTS5              	100.00%
Bootstrap support for O52958 as seed ortholog is 100%.
Bootstrap support for D3BTS5 as seed ortholog is 100%.

Group of orthologs #221. Best score 94 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:94 P.pallidum:37

Q5JF38              	100.00%		D3BUL3              	100.00%
Bootstrap support for Q5JF38 as seed ortholog is 100%.
Bootstrap support for D3BUL3 as seed ortholog is 86%.

Group of orthologs #222. Best score 93 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:93 P.pallidum:93

Q5JHD2              	100.00%		D3BFS7              	100.00%
Bootstrap support for Q5JHD2 as seed ortholog is 100%.
Bootstrap support for D3BFS7 as seed ortholog is 100%.

Group of orthologs #223. Best score 93 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:93 P.pallidum:93

Q5JDB8              	100.00%		D3BV55              	100.00%
Bootstrap support for Q5JDB8 as seed ortholog is 100%.
Bootstrap support for D3BV55 as seed ortholog is 100%.

Group of orthologs #224. Best score 92 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:92 P.pallidum:92

Q5JE01              	100.00%		D3AW80              	100.00%
                    	       		D3B3Q3              	17.11%
Bootstrap support for Q5JE01 as seed ortholog is 100%.
Bootstrap support for D3AW80 as seed ortholog is 100%.

Group of orthologs #225. Best score 92 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:92 P.pallidum:92

Q5JET7              	100.00%		D3B7L1              	100.00%
Bootstrap support for Q5JET7 as seed ortholog is 100%.
Bootstrap support for D3B7L1 as seed ortholog is 100%.

Group of orthologs #226. Best score 92 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:92 P.pallidum:92

Q5JGN5              	100.00%		D3BTV9              	100.00%
Bootstrap support for Q5JGN5 as seed ortholog is 100%.
Bootstrap support for D3BTV9 as seed ortholog is 100%.

Group of orthologs #227. Best score 91 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:91 P.pallidum:91

Q5JG70              	100.00%		D3BLC1              	100.00%
Q5JIG9              	25.67%		D3BC23              	18.49%
Q5JIN8              	19.35%		D3BDA2              	15.93%
Q5JDD3              	17.82%		D3B158              	15.83%
Q5JDA7              	14.94%		D3B8P3              	15.73%
Q5JCX0              	14.75%		D3B1K0              	13.27%
Q5JGV1              	12.84%		D3B677              	11.70%
Q5JG38              	11.11%		
Q5JIB0              	10.34%		
Q5JDQ2              	9.96%		
Q5JIG1              	7.85%		
Q5JFR9              	7.66%		
Q5JHJ6              	5.17%		
Bootstrap support for Q5JG70 as seed ortholog is 100%.
Bootstrap support for D3BLC1 as seed ortholog is 100%.

Group of orthologs #228. Best score 91 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:38 P.pallidum:30

Q5JDZ1              	100.00%		D3B0Z6              	100.00%
Bootstrap support for Q5JDZ1 as seed ortholog is 93%.
Bootstrap support for D3B0Z6 as seed ortholog is 86%.

Group of orthologs #229. Best score 91 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:91 P.pallidum:91

Q5JEX4              	100.00%		D3BU88              	100.00%
Bootstrap support for Q5JEX4 as seed ortholog is 100%.
Bootstrap support for D3BU88 as seed ortholog is 100%.

Group of orthologs #230. Best score 90 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:90 P.pallidum:90

Q5JHC0              	100.00%		D3AXY2              	100.00%
                    	       		D3BE34              	13.82%
Bootstrap support for Q5JHC0 as seed ortholog is 100%.
Bootstrap support for D3AXY2 as seed ortholog is 100%.

Group of orthologs #231. Best score 89 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:89 P.pallidum:89

Q5JGM0              	100.00%		D3BSB5              	100.00%
                    	       		D3B5E3              	47.70%
Bootstrap support for Q5JGM0 as seed ortholog is 100%.
Bootstrap support for D3BSB5 as seed ortholog is 100%.

Group of orthologs #232. Best score 88 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:88 P.pallidum:9

Q5JFI2              	100.00%		D3AZM1              	100.00%
Bootstrap support for Q5JFI2 as seed ortholog is 100%.
Bootstrap support for D3AZM1 as seed ortholog is 64%.
Alternative seed ortholog is D3BFW0 (9 bits away from this cluster)

Group of orthologs #233. Best score 88 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:88 P.pallidum:88

Q5JFW9              	100.00%		D3BCH5              	100.00%
Bootstrap support for Q5JFW9 as seed ortholog is 100%.
Bootstrap support for D3BCH5 as seed ortholog is 100%.

Group of orthologs #234. Best score 87 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:87 P.pallidum:10

Q5JFZ8              	100.00%		D3B4D7              	100.00%
Q5JJB9              	16.03%		
Q5JHY2              	13.40%		
Bootstrap support for Q5JFZ8 as seed ortholog is 100%.
Bootstrap support for D3B4D7 as seed ortholog is 65%.
Alternative seed ortholog is D3BHW4 (10 bits away from this cluster)

Group of orthologs #235. Best score 87 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:87 P.pallidum:87

Q5JE39              	100.00%		D3B0L6              	100.00%
Q5JD05              	12.97%		
Bootstrap support for Q5JE39 as seed ortholog is 100%.
Bootstrap support for D3B0L6 as seed ortholog is 100%.

Group of orthologs #236. Best score 87 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:87 P.pallidum:87

Q5JF32              	100.00%		D3BSY5              	100.00%
Q5JFD3              	46.31%		
Bootstrap support for Q5JF32 as seed ortholog is 100%.
Bootstrap support for D3BSY5 as seed ortholog is 100%.

Group of orthologs #237. Best score 87 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:87 P.pallidum:87

Q5JDH9              	100.00%		D3AW89              	100.00%
Bootstrap support for Q5JDH9 as seed ortholog is 100%.
Bootstrap support for D3AW89 as seed ortholog is 100%.

Group of orthologs #238. Best score 87 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:87 P.pallidum:87

Q5JGM4              	100.00%		D3BEH6              	100.00%
Bootstrap support for Q5JGM4 as seed ortholog is 100%.
Bootstrap support for D3BEH6 as seed ortholog is 100%.

Group of orthologs #239. Best score 87 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:87 P.pallidum:87

Q5JET2              	100.00%		D3BJB8              	100.00%
Bootstrap support for Q5JET2 as seed ortholog is 100%.
Bootstrap support for D3BJB8 as seed ortholog is 100%.

Group of orthologs #240. Best score 86 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 P.pallidum:44

Q5JJF6              	100.00%		D3B4A0              	100.00%
Bootstrap support for Q5JJF6 as seed ortholog is 100%.
Bootstrap support for D3B4A0 as seed ortholog is 97%.

Group of orthologs #241. Best score 86 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:86 P.pallidum:86

Q5JH34              	100.00%		D3BPW6              	100.00%
Bootstrap support for Q5JH34 as seed ortholog is 100%.
Bootstrap support for D3BPW6 as seed ortholog is 100%.

Group of orthologs #242. Best score 85 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:85 P.pallidum:13

Q5JGR3              	100.00%		D3BJB1              	100.00%
Bootstrap support for Q5JGR3 as seed ortholog is 100%.
Bootstrap support for D3BJB1 as seed ortholog is 83%.

Group of orthologs #243. Best score 84 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:84 P.pallidum:84

Q5JD70              	100.00%		D3BT31              	100.00%
Q5JHN7              	12.06%		
Q5JEI4              	10.31%		
Bootstrap support for Q5JD70 as seed ortholog is 100%.
Bootstrap support for D3BT31 as seed ortholog is 100%.

Group of orthologs #244. Best score 84 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:84 P.pallidum:17

Q5JGZ1              	100.00%		D3B214              	100.00%
Q5JH08              	7.17%		
Bootstrap support for Q5JGZ1 as seed ortholog is 100%.
Bootstrap support for D3B214 as seed ortholog is 62%.
Alternative seed ortholog is D3BIR1 (17 bits away from this cluster)

Group of orthologs #245. Best score 84 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:84 P.pallidum:84

Q5JJF9              	100.00%		D3AVM9              	100.00%
Bootstrap support for Q5JJF9 as seed ortholog is 100%.
Bootstrap support for D3AVM9 as seed ortholog is 100%.

Group of orthologs #246. Best score 84 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:84 P.pallidum:5

Q5JHL8              	100.00%		D3B0F6              	100.00%
Bootstrap support for Q5JHL8 as seed ortholog is 100%.
Bootstrap support for D3B0F6 as seed ortholog is 59%.
Alternative seed ortholog is D3B6G7 (5 bits away from this cluster)

Group of orthologs #247. Best score 84 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:84 P.pallidum:84

Q5JEE1              	100.00%		D3BB09              	100.00%
Bootstrap support for Q5JEE1 as seed ortholog is 100%.
Bootstrap support for D3BB09 as seed ortholog is 100%.

Group of orthologs #248. Best score 84 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:84 P.pallidum:84

Q5JFZ5              	100.00%		D3B9Y5              	100.00%
Bootstrap support for Q5JFZ5 as seed ortholog is 100%.
Bootstrap support for D3B9Y5 as seed ortholog is 100%.

Group of orthologs #249. Best score 84 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:84 P.pallidum:84

Q5JIV0              	100.00%		D3B9B9              	100.00%
Bootstrap support for Q5JIV0 as seed ortholog is 100%.
Bootstrap support for D3B9B9 as seed ortholog is 100%.

Group of orthologs #250. Best score 84 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:84 P.pallidum:84

Q5JI50              	100.00%		D3BG94              	100.00%
Bootstrap support for Q5JI50 as seed ortholog is 100%.
Bootstrap support for D3BG94 as seed ortholog is 100%.

Group of orthologs #251. Best score 84 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:84 P.pallidum:84

Q5JH93              	100.00%		D3BM60              	100.00%
Bootstrap support for Q5JH93 as seed ortholog is 100%.
Bootstrap support for D3BM60 as seed ortholog is 100%.

Group of orthologs #252. Best score 83 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:83 P.pallidum:2

Q5JJE5              	100.00%		D3BGA3              	100.00%
                    	       		D3BRE4              	100.00%
                    	       		D3BRE3              	72.28%
                    	       		D3B9V0              	60.00%
                    	       		D3B9L8              	59.21%
                    	       		D3B9L0              	56.24%
                    	       		D3B9V1              	55.45%
                    	       		D3BFH8              	46.53%
                    	       		D3BD65              	46.34%
                    	       		D3BDQ2              	46.34%
                    	       		D3AZ69              	46.14%
                    	       		D3BFI0              	45.15%
                    	       		D3BPQ8              	29.31%
                    	       		D3B9A4              	22.38%
                    	       		D3BUR9              	15.41%
                    	       		D3BMH4              	14.31%
                    	       		D3BQP6              	5.14%
Bootstrap support for Q5JJE5 as seed ortholog is 100%.
Bootstrap support for D3BGA3 as seed ortholog is 52%.
Alternative seed ortholog is D3BV16 (2 bits away from this cluster)
Bootstrap support for D3BRE4 as seed ortholog is 53%.
Alternative seed ortholog is D3BV16 (2 bits away from this cluster)

Group of orthologs #253. Best score 81 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:81 P.pallidum:7

Q5JHE3              	100.00%		D3B4B8              	100.00%
Q5JF02              	10.02%		
Bootstrap support for Q5JHE3 as seed ortholog is 100%.
Bootstrap support for D3B4B8 as seed ortholog is 56%.
Alternative seed ortholog is D3BV16 (7 bits away from this cluster)

Group of orthologs #254. Best score 81 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:81 P.pallidum:81

Q5JEE0              	100.00%		D3BIC8              	100.00%
Bootstrap support for Q5JEE0 as seed ortholog is 100%.
Bootstrap support for D3BIC8 as seed ortholog is 100%.

Group of orthologs #255. Best score 81 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:81 P.pallidum:81

Q5JI40              	100.00%		D3BH72              	100.00%
Bootstrap support for Q5JI40 as seed ortholog is 100%.
Bootstrap support for D3BH72 as seed ortholog is 100%.

Group of orthologs #256. Best score 80 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:80 P.pallidum:80

Q5JI47              	100.00%		D3AZG0              	100.00%
Bootstrap support for Q5JI47 as seed ortholog is 100%.
Bootstrap support for D3AZG0 as seed ortholog is 100%.

Group of orthologs #257. Best score 80 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:80 P.pallidum:80

Q5JGH2              	100.00%		D3BIH8              	100.00%
Bootstrap support for Q5JGH2 as seed ortholog is 100%.
Bootstrap support for D3BIH8 as seed ortholog is 100%.

Group of orthologs #258. Best score 79 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:79 P.pallidum:15

Q5JJ48              	100.00%		D3BJJ8              	100.00%
                    	       		D3B307              	90.31%
                    	       		D3AW52              	45.44%
                    	       		D3B3V0              	26.76%
Bootstrap support for Q5JJ48 as seed ortholog is 100%.
Bootstrap support for D3BJJ8 as seed ortholog is 59%.
Alternative seed ortholog is D3AXB9 (15 bits away from this cluster)

Group of orthologs #259. Best score 79 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:79 P.pallidum:79

Q5JG15              	100.00%		D3BMJ3              	100.00%
                    	       		D3B972              	8.27%
                    	       		D3BPG4              	5.41%
Bootstrap support for Q5JG15 as seed ortholog is 100%.
Bootstrap support for D3BMJ3 as seed ortholog is 100%.

Group of orthologs #260. Best score 79 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:79 P.pallidum:79

Q5JE55              	100.00%		D3AYF8              	100.00%
Bootstrap support for Q5JE55 as seed ortholog is 100%.
Bootstrap support for D3AYF8 as seed ortholog is 100%.

Group of orthologs #261. Best score 79 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:79 P.pallidum:79

Q5JGQ6              	100.00%		D3B1H2              	100.00%
Bootstrap support for Q5JGQ6 as seed ortholog is 100%.
Bootstrap support for D3B1H2 as seed ortholog is 100%.

Group of orthologs #262. Best score 79 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:18 P.pallidum:79

Q5JDA8              	100.00%		D3BEM9              	100.00%
Bootstrap support for Q5JDA8 as seed ortholog is 69%.
Alternative seed ortholog is Q5JI26 (18 bits away from this cluster)
Bootstrap support for D3BEM9 as seed ortholog is 100%.

Group of orthologs #263. Best score 79 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:79 P.pallidum:79

Q5JJ32              	100.00%		D3BAG9              	100.00%
Bootstrap support for Q5JJ32 as seed ortholog is 100%.
Bootstrap support for D3BAG9 as seed ortholog is 100%.

Group of orthologs #264. Best score 78 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:78 P.pallidum:78

Q5JDM6              	100.00%		D3BIL1              	100.00%
Bootstrap support for Q5JDM6 as seed ortholog is 100%.
Bootstrap support for D3BIL1 as seed ortholog is 100%.

Group of orthologs #265. Best score 78 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:78 P.pallidum:19

Q5JIE9              	100.00%		D3BE02              	100.00%
Bootstrap support for Q5JIE9 as seed ortholog is 100%.
Bootstrap support for D3BE02 as seed ortholog is 73%.
Alternative seed ortholog is D3BVE5 (19 bits away from this cluster)

Group of orthologs #266. Best score 77 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:77 P.pallidum:1

Q5JGP4              	100.00%		D3B816              	100.00%
                    	       		D3BJC9              	25.34%
                    	       		D3AYP0              	9.20%
Bootstrap support for Q5JGP4 as seed ortholog is 100%.
Bootstrap support for D3B816 as seed ortholog is 61%.
Alternative seed ortholog is D3BD10 (1 bits away from this cluster)

Group of orthologs #267. Best score 76 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:76 P.pallidum:76

Q5JFK1              	100.00%		D3B3F1              	100.00%
                    	       		D3BPS6              	25.78%
                    	       		D3BJJ1              	17.28%
                    	       		D3BCX1              	16.01%
Bootstrap support for Q5JFK1 as seed ortholog is 100%.
Bootstrap support for D3B3F1 as seed ortholog is 100%.

Group of orthologs #268. Best score 76 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:76 P.pallidum:76

Q5JDV0              	100.00%		D3BQB6              	100.00%
                    	       		D3BQB2              	34.14%
                    	       		D3B4H8              	9.93%
                    	       		D3BVF7              	8.31%
Bootstrap support for Q5JDV0 as seed ortholog is 100%.
Bootstrap support for D3BQB6 as seed ortholog is 100%.

Group of orthologs #269. Best score 76 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:76 P.pallidum:76

Q5JDV9              	100.00%		D3B8B2              	100.00%
Bootstrap support for Q5JDV9 as seed ortholog is 100%.
Bootstrap support for D3B8B2 as seed ortholog is 100%.

Group of orthologs #270. Best score 76 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:76 P.pallidum:76

Q5JDH4              	100.00%		D3BQU5              	100.00%
Bootstrap support for Q5JDH4 as seed ortholog is 100%.
Bootstrap support for D3BQU5 as seed ortholog is 100%.

Group of orthologs #271. Best score 76 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:76 P.pallidum:7

Q5JI92              	100.00%		D3BNI5              	100.00%
Bootstrap support for Q5JI92 as seed ortholog is 100%.
Bootstrap support for D3BNI5 as seed ortholog is 62%.
Alternative seed ortholog is D3BCX2 (7 bits away from this cluster)

Group of orthologs #272. Best score 75 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:75 P.pallidum:75

Q5JGS7              	100.00%		D3BPL5              	100.00%
Bootstrap support for Q5JGS7 as seed ortholog is 100%.
Bootstrap support for D3BPL5 as seed ortholog is 100%.

Group of orthologs #273. Best score 75 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:75 P.pallidum:75

Q5JIX8              	100.00%		D3BR47              	100.00%
Bootstrap support for Q5JIX8 as seed ortholog is 100%.
Bootstrap support for D3BR47 as seed ortholog is 100%.

Group of orthologs #274. Best score 74 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 P.pallidum:74

Q5JHM0              	100.00%		D3B961              	100.00%
Q5JJC2              	16.38%		
Bootstrap support for Q5JHM0 as seed ortholog is 100%.
Bootstrap support for D3B961 as seed ortholog is 100%.

Group of orthologs #275. Best score 74 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 P.pallidum:74

Q5JG26              	100.00%		D3B3B6              	100.00%
Bootstrap support for Q5JG26 as seed ortholog is 100%.
Bootstrap support for D3B3B6 as seed ortholog is 100%.

Group of orthologs #276. Best score 74 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:74 P.pallidum:74

Q5JI29              	100.00%		D3BLY8              	100.00%
Bootstrap support for Q5JI29 as seed ortholog is 100%.
Bootstrap support for D3BLY8 as seed ortholog is 100%.

Group of orthologs #277. Best score 73 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:73 P.pallidum:73

Q5JE27              	100.00%		D3AW13              	100.00%
Q5JEL4              	9.65%		
Bootstrap support for Q5JE27 as seed ortholog is 100%.
Bootstrap support for D3AW13 as seed ortholog is 100%.

Group of orthologs #278. Best score 73 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:11 P.pallidum:73

Q5JH70              	100.00%		D3BM68              	100.00%
Bootstrap support for Q5JH70 as seed ortholog is 63%.
Alternative seed ortholog is Q5JGQ0 (11 bits away from this cluster)
Bootstrap support for D3BM68 as seed ortholog is 100%.

Group of orthologs #279. Best score 72 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:72 P.pallidum:72

Q5JH21              	100.00%		D3B3D8              	100.00%
Bootstrap support for Q5JH21 as seed ortholog is 100%.
Bootstrap support for D3B3D8 as seed ortholog is 100%.

Group of orthologs #280. Best score 71 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:71 P.pallidum:24

Q5JEA0              	100.00%		D3BFW6              	100.00%
                    	       		D3B498              	7.44%
Bootstrap support for Q5JEA0 as seed ortholog is 100%.
Bootstrap support for D3BFW6 as seed ortholog is 71%.
Alternative seed ortholog is D3BE10 (24 bits away from this cluster)

Group of orthologs #281. Best score 71 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:71 P.pallidum:71

Q5JFL6              	100.00%		D3BUM9              	100.00%
                    	       		D3AXQ3              	52.33%
Bootstrap support for Q5JFL6 as seed ortholog is 100%.
Bootstrap support for D3BUM9 as seed ortholog is 100%.

Group of orthologs #282. Best score 71 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:71 P.pallidum:71

Q5JJ86              	100.00%		D3BT41              	100.00%
Bootstrap support for Q5JJ86 as seed ortholog is 100%.
Bootstrap support for D3BT41 as seed ortholog is 100%.

Group of orthologs #283. Best score 70 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:21 P.pallidum:70

Q5JF41              	100.00%		D3B230              	100.00%
                    	       		D3BQ52              	9.80%
Bootstrap support for Q5JF41 as seed ortholog is 84%.
Bootstrap support for D3B230 as seed ortholog is 100%.

Group of orthologs #284. Best score 69 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:69 P.pallidum:16

Q5JH23              	100.00%		D3B029              	100.00%
Bootstrap support for Q5JH23 as seed ortholog is 100%.
Bootstrap support for D3B029 as seed ortholog is 65%.
Alternative seed ortholog is D3BCC3 (16 bits away from this cluster)

Group of orthologs #285. Best score 69 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:69 P.pallidum:69

Q5JFX3              	100.00%		D3BLG3              	100.00%
Bootstrap support for Q5JFX3 as seed ortholog is 100%.
Bootstrap support for D3BLG3 as seed ortholog is 100%.

Group of orthologs #286. Best score 69 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:69 P.pallidum:69

Q5JJ78              	100.00%		D3BPA7              	100.00%
Bootstrap support for Q5JJ78 as seed ortholog is 100%.
Bootstrap support for D3BPA7 as seed ortholog is 100%.

Group of orthologs #287. Best score 67 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:67 P.pallidum:67

Q5JGG3              	100.00%		D3BDT2              	100.00%
Bootstrap support for Q5JGG3 as seed ortholog is 100%.
Bootstrap support for D3BDT2 as seed ortholog is 100%.

Group of orthologs #288. Best score 67 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:67 P.pallidum:67

Q5JHS6              	100.00%		D3BGZ6              	100.00%
Bootstrap support for Q5JHS6 as seed ortholog is 100%.
Bootstrap support for D3BGZ6 as seed ortholog is 100%.

Group of orthologs #289. Best score 66 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:66 P.pallidum:66

Q5JIB2              	100.00%		D3AW72              	100.00%
                    	       		D3BGW7              	10.44%
Bootstrap support for Q5JIB2 as seed ortholog is 100%.
Bootstrap support for D3AW72 as seed ortholog is 100%.

Group of orthologs #290. Best score 66 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:66 P.pallidum:66

Q5JIY3              	100.00%		D3B3C1              	100.00%
                    	       		D3BL07              	32.98%
Bootstrap support for Q5JIY3 as seed ortholog is 100%.
Bootstrap support for D3B3C1 as seed ortholog is 100%.

Group of orthologs #291. Best score 66 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:66 P.pallidum:66

Q5JH60              	100.00%		D3B9G6              	100.00%
Bootstrap support for Q5JH60 as seed ortholog is 100%.
Bootstrap support for D3B9G6 as seed ortholog is 100%.

Group of orthologs #292. Best score 66 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:66 P.pallidum:66

Q5JGN3              	100.00%		D3BM22              	100.00%
Bootstrap support for Q5JGN3 as seed ortholog is 100%.
Bootstrap support for D3BM22 as seed ortholog is 100%.

Group of orthologs #293. Best score 65 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:65 P.pallidum:65

Q5JHP1              	100.00%		D3BK44              	100.00%
                    	       		D3B3A5              	5.65%
                    	       		D3BKC5              	5.34%
Bootstrap support for Q5JHP1 as seed ortholog is 100%.
Bootstrap support for D3BK44 as seed ortholog is 100%.

Group of orthologs #294. Best score 65 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:65 P.pallidum:65

Q5JFG2              	100.00%		D3BHC6              	100.00%
Q5JFG7              	59.61%		
Bootstrap support for Q5JFG2 as seed ortholog is 100%.
Bootstrap support for D3BHC6 as seed ortholog is 100%.

Group of orthologs #295. Best score 65 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:65 P.pallidum:65

Q5JDS0              	100.00%		D3AZD5              	100.00%
Bootstrap support for Q5JDS0 as seed ortholog is 100%.
Bootstrap support for D3AZD5 as seed ortholog is 100%.

Group of orthologs #296. Best score 64 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:64 P.pallidum:64

Q5JI42              	100.00%		D3BPP6              	100.00%
Bootstrap support for Q5JI42 as seed ortholog is 100%.
Bootstrap support for D3BPP6 as seed ortholog is 100%.

Group of orthologs #297. Best score 63 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:63 P.pallidum:63

Q5JEC9              	100.00%		D3BDA7              	100.00%
Bootstrap support for Q5JEC9 as seed ortholog is 100%.
Bootstrap support for D3BDA7 as seed ortholog is 100%.

Group of orthologs #298. Best score 63 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:63 P.pallidum:63

Q5JFS1              	100.00%		D3BE14              	100.00%
Bootstrap support for Q5JFS1 as seed ortholog is 100%.
Bootstrap support for D3BE14 as seed ortholog is 100%.

Group of orthologs #299. Best score 62 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:62 P.pallidum:62

Q5JEG7              	100.00%		D3B438              	100.00%
Q5JD61              	8.05%		
Bootstrap support for Q5JEG7 as seed ortholog is 100%.
Bootstrap support for D3B438 as seed ortholog is 100%.

Group of orthologs #300. Best score 61 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 P.pallidum:61

Q5JD96              	100.00%		D3BPH0              	100.00%
                    	       		D3BKW6              	29.87%
Bootstrap support for Q5JD96 as seed ortholog is 100%.
Bootstrap support for D3BPH0 as seed ortholog is 100%.

Group of orthologs #301. Best score 61 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 P.pallidum:61

Q5JHJ9              	100.00%		D3AVX6              	100.00%
Bootstrap support for Q5JHJ9 as seed ortholog is 100%.
Bootstrap support for D3AVX6 as seed ortholog is 100%.

Group of orthologs #302. Best score 61 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 P.pallidum:61

Q5JE35              	100.00%		D3AZM6              	100.00%
Bootstrap support for Q5JE35 as seed ortholog is 100%.
Bootstrap support for D3AZM6 as seed ortholog is 100%.

Group of orthologs #303. Best score 61 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:61 P.pallidum:61

Q5JH51              	100.00%		D3B5F3              	100.00%
Bootstrap support for Q5JH51 as seed ortholog is 100%.
Bootstrap support for D3B5F3 as seed ortholog is 100%.

Group of orthologs #304. Best score 60 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:60 P.pallidum:60

Q5JHR1              	100.00%		D3BMK7              	100.00%
Q5JFH5              	7.80%		D3B2D5              	51.87%
Bootstrap support for Q5JHR1 as seed ortholog is 100%.
Bootstrap support for D3BMK7 as seed ortholog is 100%.

Group of orthologs #305. Best score 60 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:60 P.pallidum:60

Q5JJG9              	100.00%		D3BVG5              	100.00%
Bootstrap support for Q5JJG9 as seed ortholog is 100%.
Bootstrap support for D3BVG5 as seed ortholog is 100%.

Group of orthologs #306. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 P.pallidum:18

Q5JHP6              	100.00%		D3B439              	100.00%
Bootstrap support for Q5JHP6 as seed ortholog is 100%.
Bootstrap support for D3B439 as seed ortholog is 78%.

Group of orthologs #307. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 P.pallidum:59

Q5JH78              	100.00%		D3B6S2              	100.00%
Bootstrap support for Q5JH78 as seed ortholog is 100%.
Bootstrap support for D3B6S2 as seed ortholog is 100%.

Group of orthologs #308. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 P.pallidum:59

Q5JJ27              	100.00%		D3B6Y1              	100.00%
Bootstrap support for Q5JJ27 as seed ortholog is 100%.
Bootstrap support for D3B6Y1 as seed ortholog is 100%.

Group of orthologs #309. Best score 59 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:59 P.pallidum:59

Q5JIE3              	100.00%		D3BQ25              	100.00%
Bootstrap support for Q5JIE3 as seed ortholog is 100%.
Bootstrap support for D3BQ25 as seed ortholog is 100%.

Group of orthologs #310. Best score 58 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:58 P.pallidum:58

Q5JDB7              	100.00%		D3BA43              	100.00%
Bootstrap support for Q5JDB7 as seed ortholog is 100%.
Bootstrap support for D3BA43 as seed ortholog is 100%.

Group of orthologs #311. Best score 58 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:58 P.pallidum:58

Q5JDC7              	100.00%		D3BIR0              	100.00%
Bootstrap support for Q5JDC7 as seed ortholog is 100%.
Bootstrap support for D3BIR0 as seed ortholog is 100%.

Group of orthologs #312. Best score 58 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:58 P.pallidum:58

Q5JJH0              	100.00%		D3BTU3              	100.00%
Bootstrap support for Q5JJH0 as seed ortholog is 100%.
Bootstrap support for D3BTU3 as seed ortholog is 100%.

Group of orthologs #313. Best score 57 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:57 P.pallidum:57

Q5JFS0              	100.00%		D3BL89              	100.00%
Q5JI38              	13.77%		
Bootstrap support for Q5JFS0 as seed ortholog is 100%.
Bootstrap support for D3BL89 as seed ortholog is 100%.

Group of orthologs #314. Best score 57 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:57 P.pallidum:57

Q5JHR7              	100.00%		D3B8X3              	100.00%
Bootstrap support for Q5JHR7 as seed ortholog is 100%.
Bootstrap support for D3B8X3 as seed ortholog is 100%.

Group of orthologs #315. Best score 57 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:57 P.pallidum:10

Q5JG68              	100.00%		D3BC46              	100.00%
Bootstrap support for Q5JG68 as seed ortholog is 100%.
Bootstrap support for D3BC46 as seed ortholog is 63%.
Alternative seed ortholog is D3BJ73 (10 bits away from this cluster)

Group of orthologs #316. Best score 57 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:57 P.pallidum:57

Q5JHS3              	100.00%		D3BK06              	100.00%
Bootstrap support for Q5JHS3 as seed ortholog is 100%.
Bootstrap support for D3BK06 as seed ortholog is 100%.

Group of orthologs #317. Best score 56 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:56 P.pallidum:56

Q5JE51              	100.00%		D3B7U1              	100.00%
Bootstrap support for Q5JE51 as seed ortholog is 100%.
Bootstrap support for D3B7U1 as seed ortholog is 100%.

Group of orthologs #318. Best score 55 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:55 P.pallidum:4

Q5JEN3              	100.00%		D3BCH1              	100.00%
                    	       		D3B696              	5.11%
Bootstrap support for Q5JEN3 as seed ortholog is 100%.
Bootstrap support for D3BCH1 as seed ortholog is 53%.
Alternative seed ortholog is D3B699 (4 bits away from this cluster)

Group of orthologs #319. Best score 55 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:55 P.pallidum:13

Q5JIE0              	100.00%		D3BUE2              	100.00%
Bootstrap support for Q5JIE0 as seed ortholog is 100%.
Bootstrap support for D3BUE2 as seed ortholog is 77%.

Group of orthologs #320. Best score 54 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:54 P.pallidum:54

Q5JHQ2              	100.00%		D3BPM9              	100.00%
Q5JGN8              	6.70%		D3BJM3              	24.42%
                    	       		D3BF30              	15.07%
Bootstrap support for Q5JHQ2 as seed ortholog is 100%.
Bootstrap support for D3BPM9 as seed ortholog is 100%.

Group of orthologs #321. Best score 54 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:54 P.pallidum:54

P95547              	100.00%		D3AZH2              	100.00%
Bootstrap support for P95547 as seed ortholog is 100%.
Bootstrap support for D3AZH2 as seed ortholog is 100%.

Group of orthologs #322. Best score 54 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:54 P.pallidum:54

Q5JJF5              	100.00%		D3BBP3              	100.00%
Bootstrap support for Q5JJF5 as seed ortholog is 100%.
Bootstrap support for D3BBP3 as seed ortholog is 100%.

Group of orthologs #323. Best score 53 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:53 P.pallidum:53

Q5JFV5              	100.00%		D3BHS9              	100.00%
Bootstrap support for Q5JFV5 as seed ortholog is 100%.
Bootstrap support for D3BHS9 as seed ortholog is 100%.

Group of orthologs #324. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 P.pallidum:52

Q5JFM4              	100.00%		D3BR85              	100.00%
Q9YGB2              	15.29%		
Bootstrap support for Q5JFM4 as seed ortholog is 100%.
Bootstrap support for D3BR85 as seed ortholog is 100%.

Group of orthologs #325. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 P.pallidum:52

Q5JDC4              	100.00%		D3B465              	100.00%
Bootstrap support for Q5JDC4 as seed ortholog is 100%.
Bootstrap support for D3B465 as seed ortholog is 100%.

Group of orthologs #326. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 P.pallidum:52

Q5JF96              	100.00%		D3B3Q2              	100.00%
Bootstrap support for Q5JF96 as seed ortholog is 100%.
Bootstrap support for D3B3Q2 as seed ortholog is 100%.

Group of orthologs #327. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 P.pallidum:52

Q5JHG0              	100.00%		D3B2A6              	100.00%
Bootstrap support for Q5JHG0 as seed ortholog is 100%.
Bootstrap support for D3B2A6 as seed ortholog is 100%.

Group of orthologs #328. Best score 52 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:52 P.pallidum:52

Q5JJE3              	100.00%		D3BVH2              	100.00%
Bootstrap support for Q5JJE3 as seed ortholog is 100%.
Bootstrap support for D3BVH2 as seed ortholog is 100%.

Group of orthologs #329. Best score 51 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:51 P.pallidum:51

Q5JGF8              	100.00%		D3BKP4              	100.00%
                    	       		D3B654              	16.38%
                    	       		D3BNG4              	15.63%
                    	       		D3B1J1              	13.56%
                    	       		D3BR32              	9.42%
                    	       		D3B6L0              	6.59%
                    	       		D3B834              	5.65%
                    	       		D3AXT5              	5.27%
Bootstrap support for Q5JGF8 as seed ortholog is 100%.
Bootstrap support for D3BKP4 as seed ortholog is 100%.

Group of orthologs #330. Best score 50 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:50 P.pallidum:50

Q5JFK7              	100.00%		D3B2R4              	100.00%
Bootstrap support for Q5JFK7 as seed ortholog is 100%.
Bootstrap support for D3B2R4 as seed ortholog is 100%.

Group of orthologs #331. Best score 50 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:6 P.pallidum:50

Q5JDX1              	100.00%		D3BJ92              	100.00%
Bootstrap support for Q5JDX1 as seed ortholog is 57%.
Alternative seed ortholog is Q5JGL2 (6 bits away from this cluster)
Bootstrap support for D3BJ92 as seed ortholog is 100%.

Group of orthologs #332. Best score 49 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:49 P.pallidum:49

Q8NKS4              	100.00%		D3BR16              	100.00%
Q5JJ90              	12.74%		
Bootstrap support for Q8NKS4 as seed ortholog is 100%.
Bootstrap support for D3BR16 as seed ortholog is 100%.

Group of orthologs #333. Best score 49 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:49 P.pallidum:49

Q5JH10              	100.00%		D3B676              	100.00%
Bootstrap support for Q5JH10 as seed ortholog is 100%.
Bootstrap support for D3B676 as seed ortholog is 100%.

Group of orthologs #334. Best score 49 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:49 P.pallidum:49

Q5JF34              	100.00%		D3BBD7              	100.00%
Bootstrap support for Q5JF34 as seed ortholog is 100%.
Bootstrap support for D3BBD7 as seed ortholog is 100%.

Group of orthologs #335. Best score 49 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:49 P.pallidum:49

Q5JE65              	100.00%		D3BJ97              	100.00%
Bootstrap support for Q5JE65 as seed ortholog is 100%.
Bootstrap support for D3BJ97 as seed ortholog is 100%.

Group of orthologs #336. Best score 49 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:49 P.pallidum:49

Q8X270              	100.00%		D3BIR6              	100.00%
Bootstrap support for Q8X270 as seed ortholog is 100%.
Bootstrap support for D3BIR6 as seed ortholog is 100%.

Group of orthologs #337. Best score 48 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:48 P.pallidum:48

Q5JIU7              	100.00%		D3BMR8              	100.00%
Q5JI19              	23.16%		
Bootstrap support for Q5JIU7 as seed ortholog is 100%.
Bootstrap support for D3BMR8 as seed ortholog is 100%.

Group of orthologs #338. Best score 47 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:47 P.pallidum:47

Q5JDX5              	100.00%		D3BT59              	100.00%
Q5JIC2              	28.24%		
Q5JII7              	12.29%		
Q5JI30              	5.81%		
Bootstrap support for Q5JDX5 as seed ortholog is 100%.
Bootstrap support for D3BT59 as seed ortholog is 100%.

Group of orthologs #339. Best score 47 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:47 P.pallidum:47

Q5JHG3              	100.00%		D3AX99              	100.00%
                    	       		D3B782              	74.40%
Bootstrap support for Q5JHG3 as seed ortholog is 100%.
Bootstrap support for D3AX99 as seed ortholog is 100%.

Group of orthologs #340. Best score 47 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:47 P.pallidum:47

Q5JFQ4              	100.00%		D3B4X6              	100.00%
Bootstrap support for Q5JFQ4 as seed ortholog is 100%.
Bootstrap support for D3B4X6 as seed ortholog is 100%.

Group of orthologs #341. Best score 47 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:47 P.pallidum:47

Q5JJG2              	100.00%		D3B2B2              	100.00%
Bootstrap support for Q5JJG2 as seed ortholog is 100%.
Bootstrap support for D3B2B2 as seed ortholog is 100%.

Group of orthologs #342. Best score 47 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:47 P.pallidum:47

Q5JE88              	100.00%		D3BVK7              	100.00%
Bootstrap support for Q5JE88 as seed ortholog is 100%.
Bootstrap support for D3BVK7 as seed ortholog is 100%.

Group of orthologs #343. Best score 46 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:46 P.pallidum:46

Q5JE86              	100.00%		D3B1K7              	100.00%
Bootstrap support for Q5JE86 as seed ortholog is 100%.
Bootstrap support for D3B1K7 as seed ortholog is 100%.

Group of orthologs #344. Best score 46 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:46 P.pallidum:46

Q5JDF3              	100.00%		D3BAT7              	100.00%
Bootstrap support for Q5JDF3 as seed ortholog is 100%.
Bootstrap support for D3BAT7 as seed ortholog is 100%.

Group of orthologs #345. Best score 45 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:45 P.pallidum:45

Q5JIR4              	100.00%		D3AZF8              	100.00%
Bootstrap support for Q5JIR4 as seed ortholog is 100%.
Bootstrap support for D3AZF8 as seed ortholog is 100%.

Group of orthologs #346. Best score 45 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:45 P.pallidum:45

Q5JE50              	100.00%		D3BP72              	100.00%
Bootstrap support for Q5JE50 as seed ortholog is 100%.
Bootstrap support for D3BP72 as seed ortholog is 100%.

Group of orthologs #347. Best score 45 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:45 P.pallidum:45

Q5JIB4              	100.00%		D3BUT5              	100.00%
Bootstrap support for Q5JIB4 as seed ortholog is 100%.
Bootstrap support for D3BUT5 as seed ortholog is 100%.

Group of orthologs #348. Best score 44 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:44 P.pallidum:44

Q5JHR9              	100.00%		D3BVF2              	100.00%
                    	       		D3BB45              	14.27%
Bootstrap support for Q5JHR9 as seed ortholog is 100%.
Bootstrap support for D3BVF2 as seed ortholog is 100%.

Group of orthologs #349. Best score 44 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:44 P.pallidum:44

Q5JIY8              	100.00%		D3BM86              	100.00%
Bootstrap support for Q5JIY8 as seed ortholog is 100%.
Bootstrap support for D3BM86 as seed ortholog is 100%.

Group of orthologs #350. Best score 43 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:43 P.pallidum:43

Q5JEL5              	100.00%		D3B2C0              	100.00%
Bootstrap support for Q5JEL5 as seed ortholog is 100%.
Bootstrap support for D3B2C0 as seed ortholog is 100%.

Group of orthologs #351. Best score 42 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:42 P.pallidum:42

Q5JHB2              	100.00%		D3AXK6              	100.00%
Bootstrap support for Q5JHB2 as seed ortholog is 100%.
Bootstrap support for D3AXK6 as seed ortholog is 100%.

Group of orthologs #352. Best score 42 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:42 P.pallidum:42

Q5JGZ7              	100.00%		D3B8W3              	100.00%
Bootstrap support for Q5JGZ7 as seed ortholog is 100%.
Bootstrap support for D3B8W3 as seed ortholog is 100%.

Group of orthologs #353. Best score 42 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:42 P.pallidum:42

Q5JHG4              	100.00%		D3BNU1              	100.00%
Bootstrap support for Q5JHG4 as seed ortholog is 100%.
Bootstrap support for D3BNU1 as seed ortholog is 100%.

Group of orthologs #354. Best score 40 bits
Score difference with first non-orthologous sequence - P.kodakaraensis:40 P.pallidum:40

Q5JF29              	100.00%		D3B9L9              	100.00%
Q5JFS7              	41.34%		D3BNV7              	5.56%
Bootstrap support for Q5JF29 as seed ortholog is 100%.
Bootstrap support for D3B9L9 as seed ortholog is 100%.