###################################
1164 groups of orthologs
1198 in-paralogs from P.knowlesi
1348 in-paralogs from P.pallidum
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
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Group of orthologs #1. Best score 3280 bits
Score difference with first non-orthologous sequence - P.knowlesi:2169 P.pallidum:3280

B3KZT8              	100.00%		D3BP40              	100.00%
Bootstrap support for B3KZT8 as seed ortholog is 100%.
Bootstrap support for D3BP40 as seed ortholog is 100%.

Group of orthologs #2. Best score 3082 bits
Score difference with first non-orthologous sequence - P.knowlesi:3082 P.pallidum:3082

B3KZY4              	100.00%		D3BFM8              	100.00%
Bootstrap support for B3KZY4 as seed ortholog is 100%.
Bootstrap support for D3BFM8 as seed ortholog is 100%.

Group of orthologs #3. Best score 1366 bits
Score difference with first non-orthologous sequence - P.knowlesi:1366 P.pallidum:1366

B3LBP4              	100.00%		D3BB35              	100.00%
Bootstrap support for B3LBP4 as seed ortholog is 100%.
Bootstrap support for D3BB35 as seed ortholog is 100%.

Group of orthologs #4. Best score 1249 bits
Score difference with first non-orthologous sequence - P.knowlesi:1249 P.pallidum:1249

B3L428              	100.00%		D3BJK4              	100.00%
Bootstrap support for B3L428 as seed ortholog is 100%.
Bootstrap support for D3BJK4 as seed ortholog is 100%.

Group of orthologs #5. Best score 1211 bits
Score difference with first non-orthologous sequence - P.knowlesi:1211 P.pallidum:1211

B3LBE9              	100.00%		D3B0N0              	100.00%
Bootstrap support for B3LBE9 as seed ortholog is 100%.
Bootstrap support for D3B0N0 as seed ortholog is 100%.

Group of orthologs #6. Best score 1211 bits
Score difference with first non-orthologous sequence - P.knowlesi:1211 P.pallidum:1211

B3LB54              	100.00%		D3B936              	100.00%
Bootstrap support for B3LB54 as seed ortholog is 100%.
Bootstrap support for D3B936 as seed ortholog is 100%.

Group of orthologs #7. Best score 1178 bits
Score difference with first non-orthologous sequence - P.knowlesi:255 P.pallidum:1178

B3L1P3              	100.00%		D3BVM0              	100.00%
                    	       		D3AVZ6              	6.12%
Bootstrap support for B3L1P3 as seed ortholog is 100%.
Bootstrap support for D3BVM0 as seed ortholog is 100%.

Group of orthologs #8. Best score 1160 bits
Score difference with first non-orthologous sequence - P.knowlesi:1160 P.pallidum:1160

B3L0J5              	100.00%		D3BHD6              	100.00%
Bootstrap support for B3L0J5 as seed ortholog is 100%.
Bootstrap support for D3BHD6 as seed ortholog is 100%.

Group of orthologs #9. Best score 1141 bits
Score difference with first non-orthologous sequence - P.knowlesi:1141 P.pallidum:1141

B3L8U1              	100.00%		D3BKC8              	100.00%
Bootstrap support for B3L8U1 as seed ortholog is 100%.
Bootstrap support for D3BKC8 as seed ortholog is 100%.

Group of orthologs #10. Best score 1138 bits
Score difference with first non-orthologous sequence - P.knowlesi:1138 P.pallidum:1138

B3LCI5              	100.00%		D3BNB1              	100.00%
Bootstrap support for B3LCI5 as seed ortholog is 100%.
Bootstrap support for D3BNB1 as seed ortholog is 100%.

Group of orthologs #11. Best score 1107 bits
Score difference with first non-orthologous sequence - P.knowlesi:1107 P.pallidum:207

B3LBF9              	100.00%		D3B7U7              	100.00%
Bootstrap support for B3LBF9 as seed ortholog is 100%.
Bootstrap support for D3B7U7 as seed ortholog is 99%.

Group of orthologs #12. Best score 1060 bits
Score difference with first non-orthologous sequence - P.knowlesi:1060 P.pallidum:1010

B3L4A9              	100.00%		D3BBT9              	100.00%
Bootstrap support for B3L4A9 as seed ortholog is 100%.
Bootstrap support for D3BBT9 as seed ortholog is 100%.

Group of orthologs #13. Best score 1060 bits
Score difference with first non-orthologous sequence - P.knowlesi:1060 P.pallidum:1060

B3L960              	100.00%		D3BI99              	100.00%
Bootstrap support for B3L960 as seed ortholog is 100%.
Bootstrap support for D3BI99 as seed ortholog is 100%.

Group of orthologs #14. Best score 1054 bits
Score difference with first non-orthologous sequence - P.knowlesi:762 P.pallidum:556

B3L7L4              	100.00%		D3BIX9              	100.00%
Bootstrap support for B3L7L4 as seed ortholog is 100%.
Bootstrap support for D3BIX9 as seed ortholog is 100%.

Group of orthologs #15. Best score 1049 bits
Score difference with first non-orthologous sequence - P.knowlesi:765 P.pallidum:210

B3L9Q6              	100.00%		D3BU68              	100.00%
Bootstrap support for B3L9Q6 as seed ortholog is 100%.
Bootstrap support for D3BU68 as seed ortholog is 99%.

Group of orthologs #16. Best score 1037 bits
Score difference with first non-orthologous sequence - P.knowlesi:821 P.pallidum:289

B3L263              	100.00%		D3AVT3              	100.00%
Bootstrap support for B3L263 as seed ortholog is 100%.
Bootstrap support for D3AVT3 as seed ortholog is 100%.

Group of orthologs #17. Best score 1034 bits
Score difference with first non-orthologous sequence - P.knowlesi:1034 P.pallidum:1034

B3LBC1              	100.00%		D3BIF3              	100.00%
Bootstrap support for B3LBC1 as seed ortholog is 100%.
Bootstrap support for D3BIF3 as seed ortholog is 100%.

Group of orthologs #18. Best score 1015 bits
Score difference with first non-orthologous sequence - P.knowlesi:861 P.pallidum:748

B3L8Q4              	100.00%		D3BUX1              	100.00%
Bootstrap support for B3L8Q4 as seed ortholog is 100%.
Bootstrap support for D3BUX1 as seed ortholog is 100%.

Group of orthologs #19. Best score 960 bits
Score difference with first non-orthologous sequence - P.knowlesi:960 P.pallidum:774

B3L8H8              	100.00%		D3BM47              	100.00%
Bootstrap support for B3L8H8 as seed ortholog is 100%.
Bootstrap support for D3BM47 as seed ortholog is 100%.

Group of orthologs #20. Best score 939 bits
Score difference with first non-orthologous sequence - P.knowlesi:939 P.pallidum:645

B3L1A4              	100.00%		D3B545              	100.00%
                    	       		D3AVQ2              	46.31%
Bootstrap support for B3L1A4 as seed ortholog is 100%.
Bootstrap support for D3B545 as seed ortholog is 100%.

Group of orthologs #21. Best score 853 bits
Score difference with first non-orthologous sequence - P.knowlesi:853 P.pallidum:853

B3L7A0              	100.00%		D3BMV7              	100.00%
Bootstrap support for B3L7A0 as seed ortholog is 100%.
Bootstrap support for D3BMV7 as seed ortholog is 100%.

Group of orthologs #22. Best score 850 bits
Score difference with first non-orthologous sequence - P.knowlesi:741 P.pallidum:120

B3L9E5              	100.00%		D3BPX3              	100.00%
Bootstrap support for B3L9E5 as seed ortholog is 100%.
Bootstrap support for D3BPX3 as seed ortholog is 95%.

Group of orthologs #23. Best score 834 bits
Score difference with first non-orthologous sequence - P.knowlesi:351 P.pallidum:200

B3L6X8              	100.00%		D3BB51              	100.00%
Bootstrap support for B3L6X8 as seed ortholog is 100%.
Bootstrap support for D3BB51 as seed ortholog is 99%.

Group of orthologs #24. Best score 825 bits
Score difference with first non-orthologous sequence - P.knowlesi:825 P.pallidum:707

B3L3I5              	100.00%		D3B244              	100.00%
Bootstrap support for B3L3I5 as seed ortholog is 100%.
Bootstrap support for D3B244 as seed ortholog is 100%.

Group of orthologs #25. Best score 822 bits
Score difference with first non-orthologous sequence - P.knowlesi:822 P.pallidum:134

B3LBA6              	100.00%		D3B8W8              	100.00%
Bootstrap support for B3LBA6 as seed ortholog is 100%.
Bootstrap support for D3B8W8 as seed ortholog is 100%.

Group of orthologs #26. Best score 801 bits
Score difference with first non-orthologous sequence - P.knowlesi:801 P.pallidum:205

B3L184              	100.00%		D3B6X4              	100.00%
Bootstrap support for B3L184 as seed ortholog is 100%.
Bootstrap support for D3B6X4 as seed ortholog is 99%.

Group of orthologs #27. Best score 795 bits
Score difference with first non-orthologous sequence - P.knowlesi:600 P.pallidum:542

B3L2J7              	100.00%		D3BE43              	100.00%
Bootstrap support for B3L2J7 as seed ortholog is 100%.
Bootstrap support for D3BE43 as seed ortholog is 100%.

Group of orthologs #28. Best score 793 bits
Score difference with first non-orthologous sequence - P.knowlesi:525 P.pallidum:492

B3L3G9              	100.00%		D3BFQ2              	100.00%
Bootstrap support for B3L3G9 as seed ortholog is 100%.
Bootstrap support for D3BFQ2 as seed ortholog is 100%.

Group of orthologs #29. Best score 789 bits
Score difference with first non-orthologous sequence - P.knowlesi:279 P.pallidum:166

B3L2J4              	100.00%		D3BEE3              	100.00%
Bootstrap support for B3L2J4 as seed ortholog is 100%.
Bootstrap support for D3BEE3 as seed ortholog is 99%.

Group of orthologs #30. Best score 768 bits
Score difference with first non-orthologous sequence - P.knowlesi:768 P.pallidum:665

B3L6T7              	100.00%		D3AZB7              	100.00%
Bootstrap support for B3L6T7 as seed ortholog is 100%.
Bootstrap support for D3AZB7 as seed ortholog is 100%.

Group of orthologs #31. Best score 762 bits
Score difference with first non-orthologous sequence - P.knowlesi:158 P.pallidum:62

B3L1E0              	100.00%		D3BG38              	100.00%
Bootstrap support for B3L1E0 as seed ortholog is 99%.
Bootstrap support for D3BG38 as seed ortholog is 87%.

Group of orthologs #32. Best score 755 bits
Score difference with first non-orthologous sequence - P.knowlesi:755 P.pallidum:541

B3L5E9              	100.00%		D3AY31              	100.00%
Bootstrap support for B3L5E9 as seed ortholog is 100%.
Bootstrap support for D3AY31 as seed ortholog is 100%.

Group of orthologs #33. Best score 738 bits
Score difference with first non-orthologous sequence - P.knowlesi:636 P.pallidum:738

B3LBT4              	100.00%		D3B700              	100.00%
Bootstrap support for B3LBT4 as seed ortholog is 100%.
Bootstrap support for D3B700 as seed ortholog is 100%.

Group of orthologs #34. Best score 729 bits
Score difference with first non-orthologous sequence - P.knowlesi:729 P.pallidum:729

B3L4J0              	100.00%		D3BH29              	100.00%
Bootstrap support for B3L4J0 as seed ortholog is 100%.
Bootstrap support for D3BH29 as seed ortholog is 100%.

Group of orthologs #35. Best score 706 bits
Score difference with first non-orthologous sequence - P.knowlesi:706 P.pallidum:706

B3L6H5              	100.00%		D3BS87              	100.00%
Bootstrap support for B3L6H5 as seed ortholog is 100%.
Bootstrap support for D3BS87 as seed ortholog is 100%.

Group of orthologs #36. Best score 704 bits
Score difference with first non-orthologous sequence - P.knowlesi:592 P.pallidum:704

B3KZZ1              	100.00%		D3B5K2              	100.00%
Bootstrap support for B3KZZ1 as seed ortholog is 100%.
Bootstrap support for D3B5K2 as seed ortholog is 100%.

Group of orthologs #37. Best score 699 bits
Score difference with first non-orthologous sequence - P.knowlesi:458 P.pallidum:699

B3L347              	100.00%		D3AWD2              	100.00%
B3L1P1              	85.71%		D3BGV6              	56.19%
Bootstrap support for B3L347 as seed ortholog is 100%.
Bootstrap support for D3AWD2 as seed ortholog is 100%.

Group of orthologs #38. Best score 696 bits
Score difference with first non-orthologous sequence - P.knowlesi:415 P.pallidum:696

B3L3M0              	100.00%		D3BQW2              	100.00%
Bootstrap support for B3L3M0 as seed ortholog is 100%.
Bootstrap support for D3BQW2 as seed ortholog is 100%.

Group of orthologs #39. Best score 691 bits
Score difference with first non-orthologous sequence - P.knowlesi:691 P.pallidum:337

B3L7C9              	100.00%		D3B6W7              	100.00%
Bootstrap support for B3L7C9 as seed ortholog is 100%.
Bootstrap support for D3B6W7 as seed ortholog is 100%.

Group of orthologs #40. Best score 689 bits
Score difference with first non-orthologous sequence - P.knowlesi:620 P.pallidum:553

B3LC00              	100.00%		D3BQ59              	100.00%
Bootstrap support for B3LC00 as seed ortholog is 100%.
Bootstrap support for D3BQ59 as seed ortholog is 100%.

Group of orthologs #41. Best score 683 bits
Score difference with first non-orthologous sequence - P.knowlesi:683 P.pallidum:359

B3L6U2              	100.00%		D3B7Q7              	100.00%
Bootstrap support for B3L6U2 as seed ortholog is 100%.
Bootstrap support for D3B7Q7 as seed ortholog is 100%.

Group of orthologs #42. Best score 677 bits
Score difference with first non-orthologous sequence - P.knowlesi:677 P.pallidum:677

B3L369              	100.00%		D3BD99              	100.00%
Bootstrap support for B3L369 as seed ortholog is 100%.
Bootstrap support for D3BD99 as seed ortholog is 100%.

Group of orthologs #43. Best score 672 bits
Score difference with first non-orthologous sequence - P.knowlesi:551 P.pallidum:672

B3L4K9              	100.00%		D3BEZ7              	100.00%
Bootstrap support for B3L4K9 as seed ortholog is 100%.
Bootstrap support for D3BEZ7 as seed ortholog is 100%.

Group of orthologs #44. Best score 658 bits
Score difference with first non-orthologous sequence - P.knowlesi:658 P.pallidum:160

B3L565              	100.00%		D3BMT5              	100.00%
Bootstrap support for B3L565 as seed ortholog is 100%.
Bootstrap support for D3BMT5 as seed ortholog is 99%.

Group of orthologs #45. Best score 657 bits
Score difference with first non-orthologous sequence - P.knowlesi:51 P.pallidum:137

B3LDA3              	100.00%		D3BD07              	100.00%
                    	       		D3B2M1              	98.04%
                    	       		D3BSX0              	88.24%
                    	       		D3BM82              	86.27%
                    	       		D3B1V2              	42.16%
Bootstrap support for B3LDA3 as seed ortholog is 97%.
Bootstrap support for D3BD07 as seed ortholog is 100%.

Group of orthologs #46. Best score 650 bits
Score difference with first non-orthologous sequence - P.knowlesi:650 P.pallidum:650

B3L315              	100.00%		D3BKQ8              	100.00%
Bootstrap support for B3L315 as seed ortholog is 100%.
Bootstrap support for D3BKQ8 as seed ortholog is 100%.

Group of orthologs #47. Best score 649 bits
Score difference with first non-orthologous sequence - P.knowlesi:649 P.pallidum:649

B3L7Y7              	100.00%		D3BFQ1              	100.00%
Bootstrap support for B3L7Y7 as seed ortholog is 100%.
Bootstrap support for D3BFQ1 as seed ortholog is 100%.

Group of orthologs #48. Best score 647 bits
Score difference with first non-orthologous sequence - P.knowlesi:647 P.pallidum:647

B3L8D7              	100.00%		D3B1K5              	100.00%
Bootstrap support for B3L8D7 as seed ortholog is 100%.
Bootstrap support for D3B1K5 as seed ortholog is 100%.

Group of orthologs #49. Best score 643 bits
Score difference with first non-orthologous sequence - P.knowlesi:643 P.pallidum:587

B3L8H1              	100.00%		D3BIJ3              	100.00%
Bootstrap support for B3L8H1 as seed ortholog is 100%.
Bootstrap support for D3BIJ3 as seed ortholog is 100%.

Group of orthologs #50. Best score 641 bits
Score difference with first non-orthologous sequence - P.knowlesi:557 P.pallidum:641

B3LD12              	100.00%		D3B434              	100.00%
Bootstrap support for B3LD12 as seed ortholog is 100%.
Bootstrap support for D3B434 as seed ortholog is 100%.

Group of orthologs #51. Best score 638 bits
Score difference with first non-orthologous sequence - P.knowlesi:638 P.pallidum:227

B3LAR0              	100.00%		D3B255              	100.00%
Bootstrap support for B3LAR0 as seed ortholog is 100%.
Bootstrap support for D3B255 as seed ortholog is 100%.

Group of orthologs #52. Best score 636 bits
Score difference with first non-orthologous sequence - P.knowlesi:463 P.pallidum:151

B3L200              	100.00%		D3BMZ2              	100.00%
Bootstrap support for B3L200 as seed ortholog is 100%.
Bootstrap support for D3BMZ2 as seed ortholog is 99%.

Group of orthologs #53. Best score 628 bits
Score difference with first non-orthologous sequence - P.knowlesi:628 P.pallidum:508

B3LBS7              	100.00%		D3BIZ6              	100.00%
Bootstrap support for B3LBS7 as seed ortholog is 100%.
Bootstrap support for D3BIZ6 as seed ortholog is 100%.

Group of orthologs #54. Best score 619 bits
Score difference with first non-orthologous sequence - P.knowlesi:84 P.pallidum:291

B3L3B1              	100.00%		D3B594              	100.00%
Bootstrap support for B3L3B1 as seed ortholog is 89%.
Bootstrap support for D3B594 as seed ortholog is 100%.

Group of orthologs #55. Best score 618 bits
Score difference with first non-orthologous sequence - P.knowlesi:249 P.pallidum:533

B3L3U9              	100.00%		D3B3I9              	100.00%
Bootstrap support for B3L3U9 as seed ortholog is 100%.
Bootstrap support for D3B3I9 as seed ortholog is 100%.

Group of orthologs #56. Best score 617 bits
Score difference with first non-orthologous sequence - P.knowlesi:557 P.pallidum:404

B3L5D0              	100.00%		D3BCV5              	100.00%
Bootstrap support for B3L5D0 as seed ortholog is 100%.
Bootstrap support for D3BCV5 as seed ortholog is 100%.

Group of orthologs #57. Best score 614 bits
Score difference with first non-orthologous sequence - P.knowlesi:614 P.pallidum:481

B3L3L7              	100.00%		D3B6W8              	100.00%
Bootstrap support for B3L3L7 as seed ortholog is 100%.
Bootstrap support for D3B6W8 as seed ortholog is 100%.

Group of orthologs #58. Best score 614 bits
Score difference with first non-orthologous sequence - P.knowlesi:614 P.pallidum:373

B3LCZ1              	100.00%		D3BN72              	100.00%
Bootstrap support for B3LCZ1 as seed ortholog is 100%.
Bootstrap support for D3BN72 as seed ortholog is 100%.

Group of orthologs #59. Best score 613 bits
Score difference with first non-orthologous sequence - P.knowlesi:613 P.pallidum:373

B3L402              	100.00%		D3BFC6              	100.00%
Bootstrap support for B3L402 as seed ortholog is 100%.
Bootstrap support for D3BFC6 as seed ortholog is 100%.

Group of orthologs #60. Best score 606 bits
Score difference with first non-orthologous sequence - P.knowlesi:294 P.pallidum:606

B3LCP8              	100.00%		D3BPX4              	100.00%
Bootstrap support for B3LCP8 as seed ortholog is 99%.
Bootstrap support for D3BPX4 as seed ortholog is 100%.

Group of orthologs #61. Best score 605 bits
Score difference with first non-orthologous sequence - P.knowlesi:605 P.pallidum:356

B3L5Y2              	100.00%		D3BJF3              	100.00%
Bootstrap support for B3L5Y2 as seed ortholog is 100%.
Bootstrap support for D3BJF3 as seed ortholog is 100%.

Group of orthologs #62. Best score 603 bits
Score difference with first non-orthologous sequence - P.knowlesi:263 P.pallidum:292

B3L4J4              	100.00%		D3B1P3              	100.00%
Bootstrap support for B3L4J4 as seed ortholog is 100%.
Bootstrap support for D3B1P3 as seed ortholog is 100%.

Group of orthologs #63. Best score 598 bits
Score difference with first non-orthologous sequence - P.knowlesi:267 P.pallidum:598

B3L6Z9              	100.00%		D3BB83              	100.00%
Bootstrap support for B3L6Z9 as seed ortholog is 100%.
Bootstrap support for D3BB83 as seed ortholog is 100%.

Group of orthologs #64. Best score 593 bits
Score difference with first non-orthologous sequence - P.knowlesi:593 P.pallidum:593

B3L3V4              	100.00%		D3BP87              	100.00%
                    	       		D3BH75              	23.88%
Bootstrap support for B3L3V4 as seed ortholog is 100%.
Bootstrap support for D3BP87 as seed ortholog is 100%.

Group of orthologs #65. Best score 593 bits
Score difference with first non-orthologous sequence - P.knowlesi:360 P.pallidum:371

B3L682              	100.00%		D3BEH4              	100.00%
Bootstrap support for B3L682 as seed ortholog is 100%.
Bootstrap support for D3BEH4 as seed ortholog is 100%.

Group of orthologs #66. Best score 592 bits
Score difference with first non-orthologous sequence - P.knowlesi:592 P.pallidum:464

B3LDD0              	100.00%		D3BGX5              	100.00%
Bootstrap support for B3LDD0 as seed ortholog is 100%.
Bootstrap support for D3BGX5 as seed ortholog is 100%.

Group of orthologs #67. Best score 589 bits
Score difference with first non-orthologous sequence - P.knowlesi:44 P.pallidum:141

B3LCI6              	100.00%		D3AX78              	100.00%
                    	       		D3BVP5              	20.20%
                    	       		D3B1D8              	7.38%
                    	       		D3BF29              	6.94%
Bootstrap support for B3LCI6 as seed ortholog is 45%.
Alternative seed ortholog is B3L419 (44 bits away from this cluster)
Bootstrap support for D3AX78 as seed ortholog is 99%.

Group of orthologs #68. Best score 589 bits
Score difference with first non-orthologous sequence - P.knowlesi:498 P.pallidum:360

B3L4B5              	100.00%		D3BPJ6              	100.00%
Bootstrap support for B3L4B5 as seed ortholog is 100%.
Bootstrap support for D3BPJ6 as seed ortholog is 100%.

Group of orthologs #69. Best score 581 bits
Score difference with first non-orthologous sequence - P.knowlesi:514 P.pallidum:336

B3L746              	100.00%		D3B3N8              	100.00%
Bootstrap support for B3L746 as seed ortholog is 100%.
Bootstrap support for D3B3N8 as seed ortholog is 100%.

Group of orthologs #70. Best score 577 bits
Score difference with first non-orthologous sequence - P.knowlesi:191 P.pallidum:242

B3LCX4              	100.00%		D3BMN4              	100.00%
Bootstrap support for B3LCX4 as seed ortholog is 99%.
Bootstrap support for D3BMN4 as seed ortholog is 99%.

Group of orthologs #71. Best score 576 bits
Score difference with first non-orthologous sequence - P.knowlesi:576 P.pallidum:576

B3L0N2              	100.00%		D3AYV1              	100.00%
Bootstrap support for B3L0N2 as seed ortholog is 100%.
Bootstrap support for D3AYV1 as seed ortholog is 100%.

Group of orthologs #72. Best score 573 bits
Score difference with first non-orthologous sequence - P.knowlesi:573 P.pallidum:573

B3L997              	100.00%		D3BQY0              	100.00%
Bootstrap support for B3L997 as seed ortholog is 100%.
Bootstrap support for D3BQY0 as seed ortholog is 100%.

Group of orthologs #73. Best score 572 bits
Score difference with first non-orthologous sequence - P.knowlesi:572 P.pallidum:448

B3L5B0              	100.00%		D3BPU8              	100.00%
Bootstrap support for B3L5B0 as seed ortholog is 100%.
Bootstrap support for D3BPU8 as seed ortholog is 100%.

Group of orthologs #74. Best score 571 bits
Score difference with first non-orthologous sequence - P.knowlesi:571 P.pallidum:339

B3L4C8              	100.00%		D3B5E4              	100.00%
Bootstrap support for B3L4C8 as seed ortholog is 100%.
Bootstrap support for D3B5E4 as seed ortholog is 100%.

Group of orthologs #75. Best score 564 bits
Score difference with first non-orthologous sequence - P.knowlesi:391 P.pallidum:295

B3L5Y4              	100.00%		D3BA83              	100.00%
Bootstrap support for B3L5Y4 as seed ortholog is 100%.
Bootstrap support for D3BA83 as seed ortholog is 100%.

Group of orthologs #76. Best score 560 bits
Score difference with first non-orthologous sequence - P.knowlesi:211 P.pallidum:323

B3LCM2              	100.00%		D3B2A8              	100.00%
Bootstrap support for B3LCM2 as seed ortholog is 100%.
Bootstrap support for D3B2A8 as seed ortholog is 100%.

Group of orthologs #77. Best score 559 bits
Score difference with first non-orthologous sequence - P.knowlesi:390 P.pallidum:446

B3L633              	100.00%		D3B2N2              	100.00%
                    	       		D3BQN9              	67.79%
                    	       		D3BQP1              	45.32%
                    	       		D3B9D6              	31.69%
Bootstrap support for B3L633 as seed ortholog is 100%.
Bootstrap support for D3B2N2 as seed ortholog is 100%.

Group of orthologs #78. Best score 559 bits
Score difference with first non-orthologous sequence - P.knowlesi:559 P.pallidum:559

B3L0U2              	100.00%		D3B684              	100.00%
Bootstrap support for B3L0U2 as seed ortholog is 100%.
Bootstrap support for D3B684 as seed ortholog is 100%.

Group of orthologs #79. Best score 559 bits
Score difference with first non-orthologous sequence - P.knowlesi:559 P.pallidum:559

B3L4A4              	100.00%		D3B3X6              	100.00%
Bootstrap support for B3L4A4 as seed ortholog is 100%.
Bootstrap support for D3B3X6 as seed ortholog is 100%.

Group of orthologs #80. Best score 558 bits
Score difference with first non-orthologous sequence - P.knowlesi:558 P.pallidum:558

B3L7Y9              	100.00%		D3B3V5              	100.00%
Bootstrap support for B3L7Y9 as seed ortholog is 100%.
Bootstrap support for D3B3V5 as seed ortholog is 100%.

Group of orthologs #81. Best score 557 bits
Score difference with first non-orthologous sequence - P.knowlesi:557 P.pallidum:557

B3L165              	100.00%		D3B474              	100.00%
Bootstrap support for B3L165 as seed ortholog is 100%.
Bootstrap support for D3B474 as seed ortholog is 100%.

Group of orthologs #82. Best score 555 bits
Score difference with first non-orthologous sequence - P.knowlesi:555 P.pallidum:555

B3L212              	100.00%		D3BT14              	100.00%
Bootstrap support for B3L212 as seed ortholog is 100%.
Bootstrap support for D3BT14 as seed ortholog is 100%.

Group of orthologs #83. Best score 554 bits
Score difference with first non-orthologous sequence - P.knowlesi:554 P.pallidum:554

B3L8E1              	100.00%		D3BEC9              	100.00%
                    	       		D3B1Q4              	5.05%
Bootstrap support for B3L8E1 as seed ortholog is 100%.
Bootstrap support for D3BEC9 as seed ortholog is 100%.

Group of orthologs #84. Best score 551 bits
Score difference with first non-orthologous sequence - P.knowlesi:504 P.pallidum:357

B3LCT4              	100.00%		D3B0K9              	100.00%
Bootstrap support for B3LCT4 as seed ortholog is 100%.
Bootstrap support for D3B0K9 as seed ortholog is 100%.

Group of orthologs #85. Best score 551 bits
Score difference with first non-orthologous sequence - P.knowlesi:551 P.pallidum:551

B3L4H1              	100.00%		D3BG39              	100.00%
Bootstrap support for B3L4H1 as seed ortholog is 100%.
Bootstrap support for D3BG39 as seed ortholog is 100%.

Group of orthologs #86. Best score 550 bits
Score difference with first non-orthologous sequence - P.knowlesi:78 P.pallidum:550

B3LCL1              	100.00%		D3BEQ3              	100.00%
                    	       		D3BK59              	7.07%
Bootstrap support for B3LCL1 as seed ortholog is 94%.
Bootstrap support for D3BEQ3 as seed ortholog is 100%.

Group of orthologs #87. Best score 547 bits
Score difference with first non-orthologous sequence - P.knowlesi:547 P.pallidum:547

B3L4W9              	100.00%		D3BM68              	100.00%
Bootstrap support for B3L4W9 as seed ortholog is 100%.
Bootstrap support for D3BM68 as seed ortholog is 100%.

Group of orthologs #88. Best score 547 bits
Score difference with first non-orthologous sequence - P.knowlesi:547 P.pallidum:547

B3L8T7              	100.00%		D3BRS6              	100.00%
Bootstrap support for B3L8T7 as seed ortholog is 100%.
Bootstrap support for D3BRS6 as seed ortholog is 100%.

Group of orthologs #89. Best score 547 bits
Score difference with first non-orthologous sequence - P.knowlesi:547 P.pallidum:547

B3LCD4              	100.00%		D3BRI9              	100.00%
Bootstrap support for B3LCD4 as seed ortholog is 100%.
Bootstrap support for D3BRI9 as seed ortholog is 100%.

Group of orthologs #90. Best score 545 bits
Score difference with first non-orthologous sequence - P.knowlesi:545 P.pallidum:424

B3L1F4              	100.00%		D3B5U3              	100.00%
Bootstrap support for B3L1F4 as seed ortholog is 100%.
Bootstrap support for D3B5U3 as seed ortholog is 100%.

Group of orthologs #91. Best score 545 bits
Score difference with first non-orthologous sequence - P.knowlesi:545 P.pallidum:468

B3L7I1              	100.00%		D3B015              	100.00%
Bootstrap support for B3L7I1 as seed ortholog is 100%.
Bootstrap support for D3B015 as seed ortholog is 100%.

Group of orthologs #92. Best score 545 bits
Score difference with first non-orthologous sequence - P.knowlesi:139 P.pallidum:118

B3L619              	100.00%		D3BE82              	100.00%
Bootstrap support for B3L619 as seed ortholog is 99%.
Bootstrap support for D3BE82 as seed ortholog is 99%.

Group of orthologs #93. Best score 544 bits
Score difference with first non-orthologous sequence - P.knowlesi:544 P.pallidum:386

B3L0J2              	100.00%		D3AY78              	100.00%
Bootstrap support for B3L0J2 as seed ortholog is 100%.
Bootstrap support for D3AY78 as seed ortholog is 100%.

Group of orthologs #94. Best score 544 bits
Score difference with first non-orthologous sequence - P.knowlesi:326 P.pallidum:192

B3KZR4              	100.00%		D3BEG0              	100.00%
Bootstrap support for B3KZR4 as seed ortholog is 99%.
Bootstrap support for D3BEG0 as seed ortholog is 98%.

Group of orthologs #95. Best score 539 bits
Score difference with first non-orthologous sequence - P.knowlesi:539 P.pallidum:539

B3KZK7              	100.00%		D3B350              	100.00%
Bootstrap support for B3KZK7 as seed ortholog is 100%.
Bootstrap support for D3B350 as seed ortholog is 100%.

Group of orthologs #96. Best score 535 bits
Score difference with first non-orthologous sequence - P.knowlesi:535 P.pallidum:364

B3L4H0              	100.00%		D3BDZ2              	100.00%
Bootstrap support for B3L4H0 as seed ortholog is 100%.
Bootstrap support for D3BDZ2 as seed ortholog is 100%.

Group of orthologs #97. Best score 531 bits
Score difference with first non-orthologous sequence - P.knowlesi:531 P.pallidum:195

B3L753              	100.00%		D3BP51              	100.00%
Bootstrap support for B3L753 as seed ortholog is 100%.
Bootstrap support for D3BP51 as seed ortholog is 100%.

Group of orthologs #98. Best score 528 bits
Score difference with first non-orthologous sequence - P.knowlesi:126 P.pallidum:528

B3L4Z9              	100.00%		D3B4Y9              	100.00%
                    	       		D3BDW2              	11.52%
Bootstrap support for B3L4Z9 as seed ortholog is 99%.
Bootstrap support for D3B4Y9 as seed ortholog is 100%.

Group of orthologs #99. Best score 527 bits
Score difference with first non-orthologous sequence - P.knowlesi:527 P.pallidum:527

B3LAH4              	100.00%		D3B7L4              	100.00%
Bootstrap support for B3LAH4 as seed ortholog is 100%.
Bootstrap support for D3B7L4 as seed ortholog is 100%.

Group of orthologs #100. Best score 522 bits
Score difference with first non-orthologous sequence - P.knowlesi:263 P.pallidum:259

B3LAL6              	100.00%		D3BBY9              	100.00%
Bootstrap support for B3LAL6 as seed ortholog is 100%.
Bootstrap support for D3BBY9 as seed ortholog is 100%.

Group of orthologs #101. Best score 513 bits
Score difference with first non-orthologous sequence - P.knowlesi:513 P.pallidum:179

B3L193              	100.00%		D3B883              	100.00%
Bootstrap support for B3L193 as seed ortholog is 100%.
Bootstrap support for D3B883 as seed ortholog is 99%.

Group of orthologs #102. Best score 510 bits
Score difference with first non-orthologous sequence - P.knowlesi:510 P.pallidum:510

B3LAR4              	100.00%		D3B5W3              	100.00%
Bootstrap support for B3LAR4 as seed ortholog is 100%.
Bootstrap support for D3B5W3 as seed ortholog is 100%.

Group of orthologs #103. Best score 509 bits
Score difference with first non-orthologous sequence - P.knowlesi:509 P.pallidum:509

B3LAC5              	100.00%		D3B9F6              	100.00%
Bootstrap support for B3LAC5 as seed ortholog is 100%.
Bootstrap support for D3B9F6 as seed ortholog is 100%.

Group of orthologs #104. Best score 508 bits
Score difference with first non-orthologous sequence - P.knowlesi:508 P.pallidum:508

B3LAJ1              	100.00%		D3AWX0              	100.00%
Bootstrap support for B3LAJ1 as seed ortholog is 100%.
Bootstrap support for D3AWX0 as seed ortholog is 100%.

Group of orthologs #105. Best score 508 bits
Score difference with first non-orthologous sequence - P.knowlesi:508 P.pallidum:374

B3LBM5              	100.00%		D3BHQ7              	100.00%
Bootstrap support for B3LBM5 as seed ortholog is 100%.
Bootstrap support for D3BHQ7 as seed ortholog is 100%.

Group of orthologs #106. Best score 505 bits
Score difference with first non-orthologous sequence - P.knowlesi:287 P.pallidum:179

B3LBS6              	100.00%		D3B3K7              	100.00%
Bootstrap support for B3LBS6 as seed ortholog is 100%.
Bootstrap support for D3B3K7 as seed ortholog is 99%.

Group of orthologs #107. Best score 500 bits
Score difference with first non-orthologous sequence - P.knowlesi:500 P.pallidum:500

B3L9L0              	100.00%		D3AZW1              	100.00%
Bootstrap support for B3L9L0 as seed ortholog is 100%.
Bootstrap support for D3AZW1 as seed ortholog is 100%.

Group of orthologs #108. Best score 500 bits
Score difference with first non-orthologous sequence - P.knowlesi:500 P.pallidum:145

B3LC85              	100.00%		D3AZ87              	100.00%
Bootstrap support for B3LC85 as seed ortholog is 100%.
Bootstrap support for D3AZ87 as seed ortholog is 99%.

Group of orthologs #109. Best score 500 bits
Score difference with first non-orthologous sequence - P.knowlesi:442 P.pallidum:379

B3LD39              	100.00%		D3B6H8              	100.00%
Bootstrap support for B3LD39 as seed ortholog is 100%.
Bootstrap support for D3B6H8 as seed ortholog is 100%.

Group of orthologs #110. Best score 498 bits
Score difference with first non-orthologous sequence - P.knowlesi:424 P.pallidum:355

B3L7W9              	100.00%		D3BK16              	100.00%
Bootstrap support for B3L7W9 as seed ortholog is 100%.
Bootstrap support for D3BK16 as seed ortholog is 100%.

Group of orthologs #111. Best score 497 bits
Score difference with first non-orthologous sequence - P.knowlesi:497 P.pallidum:497

B3L2P2              	100.00%		D3BGD9              	100.00%
Bootstrap support for B3L2P2 as seed ortholog is 100%.
Bootstrap support for D3BGD9 as seed ortholog is 100%.

Group of orthologs #112. Best score 495 bits
Score difference with first non-orthologous sequence - P.knowlesi:69 P.pallidum:282

B3L971              	100.00%		D3BMB3              	100.00%
Bootstrap support for B3L971 as seed ortholog is 98%.
Bootstrap support for D3BMB3 as seed ortholog is 100%.

Group of orthologs #113. Best score 494 bits
Score difference with first non-orthologous sequence - P.knowlesi:277 P.pallidum:174

B3L794              	100.00%		D3B6E1              	100.00%
Bootstrap support for B3L794 as seed ortholog is 100%.
Bootstrap support for D3B6E1 as seed ortholog is 99%.

Group of orthologs #114. Best score 493 bits
Score difference with first non-orthologous sequence - P.knowlesi:493 P.pallidum:493

B3L2D7              	100.00%		D3BSJ1              	100.00%
Bootstrap support for B3L2D7 as seed ortholog is 100%.
Bootstrap support for D3BSJ1 as seed ortholog is 100%.

Group of orthologs #115. Best score 493 bits
Score difference with first non-orthologous sequence - P.knowlesi:493 P.pallidum:37

B3L892              	100.00%		D3BRU6              	100.00%
Bootstrap support for B3L892 as seed ortholog is 100%.
Bootstrap support for D3BRU6 as seed ortholog is 79%.

Group of orthologs #116. Best score 489 bits
Score difference with first non-orthologous sequence - P.knowlesi:489 P.pallidum:126

B3L3U5              	100.00%		D3BQM3              	100.00%
Bootstrap support for B3L3U5 as seed ortholog is 100%.
Bootstrap support for D3BQM3 as seed ortholog is 99%.

Group of orthologs #117. Best score 488 bits
Score difference with first non-orthologous sequence - P.knowlesi:488 P.pallidum:488

B3L240              	100.00%		D3BK20              	100.00%
Bootstrap support for B3L240 as seed ortholog is 100%.
Bootstrap support for D3BK20 as seed ortholog is 100%.

Group of orthologs #118. Best score 487 bits
Score difference with first non-orthologous sequence - P.knowlesi:12 P.pallidum:487

B3L4L2              	100.00%		D3BI12              	100.00%
Bootstrap support for B3L4L2 as seed ortholog is 88%.
Bootstrap support for D3BI12 as seed ortholog is 100%.

Group of orthologs #119. Best score 486 bits
Score difference with first non-orthologous sequence - P.knowlesi:486 P.pallidum:486

B3L694              	100.00%		D3AWW1              	100.00%
Bootstrap support for B3L694 as seed ortholog is 100%.
Bootstrap support for D3AWW1 as seed ortholog is 100%.

Group of orthologs #120. Best score 484 bits
Score difference with first non-orthologous sequence - P.knowlesi:484 P.pallidum:484

B3L2N9              	100.00%		D3B427              	100.00%
Bootstrap support for B3L2N9 as seed ortholog is 100%.
Bootstrap support for D3B427 as seed ortholog is 100%.

Group of orthologs #121. Best score 484 bits
Score difference with first non-orthologous sequence - P.knowlesi:484 P.pallidum:484

B3LB14              	100.00%		D3BVL5              	100.00%
Bootstrap support for B3LB14 as seed ortholog is 100%.
Bootstrap support for D3BVL5 as seed ortholog is 100%.

Group of orthologs #122. Best score 482 bits
Score difference with first non-orthologous sequence - P.knowlesi:482 P.pallidum:482

B3L8A1              	100.00%		D3B9H8              	100.00%
Bootstrap support for B3L8A1 as seed ortholog is 100%.
Bootstrap support for D3B9H8 as seed ortholog is 100%.

Group of orthologs #123. Best score 480 bits
Score difference with first non-orthologous sequence - P.knowlesi:256 P.pallidum:263

B3L6H8              	100.00%		D3BDE5              	100.00%
Bootstrap support for B3L6H8 as seed ortholog is 100%.
Bootstrap support for D3BDE5 as seed ortholog is 100%.

Group of orthologs #124. Best score 479 bits
Score difference with first non-orthologous sequence - P.knowlesi:479 P.pallidum:479

B3KZ67              	100.00%		D3BAK8              	100.00%
Bootstrap support for B3KZ67 as seed ortholog is 100%.
Bootstrap support for D3BAK8 as seed ortholog is 100%.

Group of orthologs #125. Best score 479 bits
Score difference with first non-orthologous sequence - P.knowlesi:195 P.pallidum:197

B3LBY6              	100.00%		D3BRF2              	100.00%
Bootstrap support for B3LBY6 as seed ortholog is 100%.
Bootstrap support for D3BRF2 as seed ortholog is 99%.

Group of orthologs #126. Best score 477 bits
Score difference with first non-orthologous sequence - P.knowlesi:477 P.pallidum:477

B3L2S3              	100.00%		D3AZM1              	100.00%
Bootstrap support for B3L2S3 as seed ortholog is 100%.
Bootstrap support for D3AZM1 as seed ortholog is 100%.

Group of orthologs #127. Best score 477 bits
Score difference with first non-orthologous sequence - P.knowlesi:251 P.pallidum:115

B3L9V8              	100.00%		D3BB29              	100.00%
Bootstrap support for B3L9V8 as seed ortholog is 100%.
Bootstrap support for D3BB29 as seed ortholog is 99%.

Group of orthologs #128. Best score 474 bits
Score difference with first non-orthologous sequence - P.knowlesi:261 P.pallidum:474

B3KZB9              	100.00%		D3AXU9              	100.00%
Bootstrap support for B3KZB9 as seed ortholog is 100%.
Bootstrap support for D3AXU9 as seed ortholog is 100%.

Group of orthologs #129. Best score 471 bits
Score difference with first non-orthologous sequence - P.knowlesi:300 P.pallidum:128

B3L8U0              	100.00%		D3B0C6              	100.00%
Bootstrap support for B3L8U0 as seed ortholog is 100%.
Bootstrap support for D3B0C6 as seed ortholog is 95%.

Group of orthologs #130. Best score 469 bits
Score difference with first non-orthologous sequence - P.knowlesi:469 P.pallidum:469

B3L2M5              	100.00%		D3BQJ8              	100.00%
Bootstrap support for B3L2M5 as seed ortholog is 100%.
Bootstrap support for D3BQJ8 as seed ortholog is 100%.

Group of orthologs #131. Best score 466 bits
Score difference with first non-orthologous sequence - P.knowlesi:171 P.pallidum:203

B3L6I2              	100.00%		D3BBD1              	100.00%
Bootstrap support for B3L6I2 as seed ortholog is 99%.
Bootstrap support for D3BBD1 as seed ortholog is 100%.

Group of orthologs #132. Best score 465 bits
Score difference with first non-orthologous sequence - P.knowlesi:169 P.pallidum:8

B3KZ56              	100.00%		D3BKM7              	100.00%
Bootstrap support for B3KZ56 as seed ortholog is 99%.
Bootstrap support for D3BKM7 as seed ortholog is 55%.
Alternative seed ortholog is D3B9Y8 (8 bits away from this cluster)

Group of orthologs #133. Best score 462 bits
Score difference with first non-orthologous sequence - P.knowlesi:160 P.pallidum:462

B3L4Y5              	100.00%		D3BLY9              	100.00%
Bootstrap support for B3L4Y5 as seed ortholog is 99%.
Bootstrap support for D3BLY9 as seed ortholog is 100%.

Group of orthologs #134. Best score 462 bits
Score difference with first non-orthologous sequence - P.knowlesi:462 P.pallidum:462

B3LBK2              	100.00%		D3BUQ9              	100.00%
Bootstrap support for B3LBK2 as seed ortholog is 100%.
Bootstrap support for D3BUQ9 as seed ortholog is 100%.

Group of orthologs #135. Best score 461 bits
Score difference with first non-orthologous sequence - P.knowlesi:461 P.pallidum:461

B3LD81              	100.00%		D3BAK5              	100.00%
Bootstrap support for B3LD81 as seed ortholog is 100%.
Bootstrap support for D3BAK5 as seed ortholog is 100%.

Group of orthologs #136. Best score 456 bits
Score difference with first non-orthologous sequence - P.knowlesi:456 P.pallidum:456

B3LC95              	100.00%		D3B3Y9              	100.00%
Bootstrap support for B3LC95 as seed ortholog is 100%.
Bootstrap support for D3B3Y9 as seed ortholog is 100%.

Group of orthologs #137. Best score 453 bits
Score difference with first non-orthologous sequence - P.knowlesi:453 P.pallidum:453

B3L1W5              	100.00%		D3B5A9              	100.00%
Bootstrap support for B3L1W5 as seed ortholog is 100%.
Bootstrap support for D3B5A9 as seed ortholog is 100%.

Group of orthologs #138. Best score 451 bits
Score difference with first non-orthologous sequence - P.knowlesi:172 P.pallidum:135

B3L776              	100.00%		D3BV25              	100.00%
Bootstrap support for B3L776 as seed ortholog is 99%.
Bootstrap support for D3BV25 as seed ortholog is 99%.

Group of orthologs #139. Best score 448 bits
Score difference with first non-orthologous sequence - P.knowlesi:448 P.pallidum:448

B3L654              	100.00%		D3BNY4              	100.00%
Bootstrap support for B3L654 as seed ortholog is 100%.
Bootstrap support for D3BNY4 as seed ortholog is 100%.

Group of orthologs #140. Best score 447 bits
Score difference with first non-orthologous sequence - P.knowlesi:327 P.pallidum:301

B3L4N6              	100.00%		D3B471              	100.00%
Bootstrap support for B3L4N6 as seed ortholog is 100%.
Bootstrap support for D3B471 as seed ortholog is 100%.

Group of orthologs #141. Best score 446 bits
Score difference with first non-orthologous sequence - P.knowlesi:210 P.pallidum:227

B3L0Q5              	100.00%		D3BNB9              	100.00%
Bootstrap support for B3L0Q5 as seed ortholog is 100%.
Bootstrap support for D3BNB9 as seed ortholog is 100%.

Group of orthologs #142. Best score 446 bits
Score difference with first non-orthologous sequence - P.knowlesi:446 P.pallidum:446

B3L8C2              	100.00%		D3BRX9              	100.00%
Bootstrap support for B3L8C2 as seed ortholog is 100%.
Bootstrap support for D3BRX9 as seed ortholog is 100%.

Group of orthologs #143. Best score 443 bits
Score difference with first non-orthologous sequence - P.knowlesi:443 P.pallidum:288

B3LD69              	100.00%		D3AVV8              	100.00%
Bootstrap support for B3LD69 as seed ortholog is 100%.
Bootstrap support for D3AVV8 as seed ortholog is 100%.

Group of orthologs #144. Best score 443 bits
Score difference with first non-orthologous sequence - P.knowlesi:443 P.pallidum:443

B3L8R5              	100.00%		D3B344              	100.00%
Bootstrap support for B3L8R5 as seed ortholog is 100%.
Bootstrap support for D3B344 as seed ortholog is 100%.

Group of orthologs #145. Best score 442 bits
Score difference with first non-orthologous sequence - P.knowlesi:243 P.pallidum:197

B3LA76              	100.00%		D3BM62              	100.00%
Bootstrap support for B3LA76 as seed ortholog is 100%.
Bootstrap support for D3BM62 as seed ortholog is 100%.

Group of orthologs #146. Best score 441 bits
Score difference with first non-orthologous sequence - P.knowlesi:441 P.pallidum:308

B3L8S5              	100.00%		D3B7P5              	100.00%
Bootstrap support for B3L8S5 as seed ortholog is 100%.
Bootstrap support for D3B7P5 as seed ortholog is 100%.

Group of orthologs #147. Best score 436 bits
Score difference with first non-orthologous sequence - P.knowlesi:350 P.pallidum:436

B3LD11              	100.00%		D3B2S5              	100.00%
                    	       		D3BUR5              	46.15%
Bootstrap support for B3LD11 as seed ortholog is 100%.
Bootstrap support for D3B2S5 as seed ortholog is 100%.

Group of orthologs #148. Best score 435 bits
Score difference with first non-orthologous sequence - P.knowlesi:435 P.pallidum:435

B3L5F6              	100.00%		D3B127              	100.00%
Bootstrap support for B3L5F6 as seed ortholog is 100%.
Bootstrap support for D3B127 as seed ortholog is 100%.

Group of orthologs #149. Best score 434 bits
Score difference with first non-orthologous sequence - P.knowlesi:434 P.pallidum:434

B3KZ79              	100.00%		D3BUD3              	100.00%
                    	       		D3BUC4              	51.74%
Bootstrap support for B3KZ79 as seed ortholog is 100%.
Bootstrap support for D3BUD3 as seed ortholog is 100%.

Group of orthologs #150. Best score 432 bits
Score difference with first non-orthologous sequence - P.knowlesi:172 P.pallidum:432

B3L5Z1              	100.00%		D3B0M9              	100.00%
Bootstrap support for B3L5Z1 as seed ortholog is 99%.
Bootstrap support for D3B0M9 as seed ortholog is 100%.

Group of orthologs #151. Best score 431 bits
Score difference with first non-orthologous sequence - P.knowlesi:5 P.pallidum:79

B3KZN7              	100.00%		D3B962              	100.00%
Bootstrap support for B3KZN7 as seed ortholog is 57%.
Alternative seed ortholog is B3LAP0 (5 bits away from this cluster)
Bootstrap support for D3B962 as seed ortholog is 99%.

Group of orthologs #152. Best score 429 bits
Score difference with first non-orthologous sequence - P.knowlesi:253 P.pallidum:429

B3LAV4              	100.00%		D3BUD7              	100.00%
                    	       		D3BKB8              	28.80%
Bootstrap support for B3LAV4 as seed ortholog is 100%.
Bootstrap support for D3BUD7 as seed ortholog is 100%.

Group of orthologs #153. Best score 429 bits
Score difference with first non-orthologous sequence - P.knowlesi:258 P.pallidum:429

B3KZB3              	100.00%		D3B2V3              	100.00%
Bootstrap support for B3KZB3 as seed ortholog is 100%.
Bootstrap support for D3B2V3 as seed ortholog is 100%.

Group of orthologs #154. Best score 426 bits
Score difference with first non-orthologous sequence - P.knowlesi:375 P.pallidum:426

B3L4F8              	100.00%		D3BF55              	100.00%
Bootstrap support for B3L4F8 as seed ortholog is 100%.
Bootstrap support for D3BF55 as seed ortholog is 100%.

Group of orthologs #155. Best score 426 bits
Score difference with first non-orthologous sequence - P.knowlesi:353 P.pallidum:305

B3L3A6              	100.00%		D3BP61              	100.00%
Bootstrap support for B3L3A6 as seed ortholog is 100%.
Bootstrap support for D3BP61 as seed ortholog is 100%.

Group of orthologs #156. Best score 425 bits
Score difference with first non-orthologous sequence - P.knowlesi:425 P.pallidum:210

B3L0B3              	100.00%		D3AY64              	100.00%
Bootstrap support for B3L0B3 as seed ortholog is 100%.
Bootstrap support for D3AY64 as seed ortholog is 100%.

Group of orthologs #157. Best score 425 bits
Score difference with first non-orthologous sequence - P.knowlesi:364 P.pallidum:371

B3L5H4              	100.00%		D3BDA3              	100.00%
Bootstrap support for B3L5H4 as seed ortholog is 100%.
Bootstrap support for D3BDA3 as seed ortholog is 100%.

Group of orthologs #158. Best score 425 bits
Score difference with first non-orthologous sequence - P.knowlesi:247 P.pallidum:287

B3LC50              	100.00%		D3BBY5              	100.00%
Bootstrap support for B3LC50 as seed ortholog is 100%.
Bootstrap support for D3BBY5 as seed ortholog is 100%.

Group of orthologs #159. Best score 425 bits
Score difference with first non-orthologous sequence - P.knowlesi:216 P.pallidum:90

B3L755              	100.00%		D3BMU7              	100.00%
Bootstrap support for B3L755 as seed ortholog is 100%.
Bootstrap support for D3BMU7 as seed ortholog is 99%.

Group of orthologs #160. Best score 424 bits
Score difference with first non-orthologous sequence - P.knowlesi:424 P.pallidum:424

B3L287              	100.00%		D3BF15              	100.00%
Bootstrap support for B3L287 as seed ortholog is 100%.
Bootstrap support for D3BF15 as seed ortholog is 100%.

Group of orthologs #161. Best score 423 bits
Score difference with first non-orthologous sequence - P.knowlesi:423 P.pallidum:225

B3L7W8              	100.00%		D3B161              	100.00%
Bootstrap support for B3L7W8 as seed ortholog is 100%.
Bootstrap support for D3B161 as seed ortholog is 100%.

Group of orthologs #162. Best score 423 bits
Score difference with first non-orthologous sequence - P.knowlesi:423 P.pallidum:144

B3L6L5              	100.00%		D3BBF7              	100.00%
Bootstrap support for B3L6L5 as seed ortholog is 100%.
Bootstrap support for D3BBF7 as seed ortholog is 96%.

Group of orthologs #163. Best score 420 bits
Score difference with first non-orthologous sequence - P.knowlesi:420 P.pallidum:356

B3KZW6              	100.00%		D3B1F9              	100.00%
Bootstrap support for B3KZW6 as seed ortholog is 100%.
Bootstrap support for D3B1F9 as seed ortholog is 100%.

Group of orthologs #164. Best score 420 bits
Score difference with first non-orthologous sequence - P.knowlesi:84 P.pallidum:94

B3L454              	100.00%		D3B2M8              	100.00%
Bootstrap support for B3L454 as seed ortholog is 99%.
Bootstrap support for D3B2M8 as seed ortholog is 99%.

Group of orthologs #165. Best score 420 bits
Score difference with first non-orthologous sequence - P.knowlesi:420 P.pallidum:420

B3L9R6              	100.00%		D3BBV3              	100.00%
Bootstrap support for B3L9R6 as seed ortholog is 100%.
Bootstrap support for D3BBV3 as seed ortholog is 100%.

Group of orthologs #166. Best score 420 bits
Score difference with first non-orthologous sequence - P.knowlesi:420 P.pallidum:420

B3LBE8              	100.00%		D3BB47              	100.00%
Bootstrap support for B3LBE8 as seed ortholog is 100%.
Bootstrap support for D3BB47 as seed ortholog is 100%.

Group of orthologs #167. Best score 419 bits
Score difference with first non-orthologous sequence - P.knowlesi:419 P.pallidum:117

B3L538              	100.00%		D3B568              	100.00%
Bootstrap support for B3L538 as seed ortholog is 100%.
Bootstrap support for D3B568 as seed ortholog is 99%.

Group of orthologs #168. Best score 418 bits
Score difference with first non-orthologous sequence - P.knowlesi:199 P.pallidum:418

B3L7D9              	100.00%		D3B0M1              	100.00%
Bootstrap support for B3L7D9 as seed ortholog is 99%.
Bootstrap support for D3B0M1 as seed ortholog is 100%.

Group of orthologs #169. Best score 416 bits
Score difference with first non-orthologous sequence - P.knowlesi:416 P.pallidum:416

B3L9D3              	100.00%		D3BV45              	100.00%
Bootstrap support for B3L9D3 as seed ortholog is 100%.
Bootstrap support for D3BV45 as seed ortholog is 100%.

Group of orthologs #170. Best score 415 bits
Score difference with first non-orthologous sequence - P.knowlesi:415 P.pallidum:415

B3L7B6              	100.00%		D3BMV1              	100.00%
Bootstrap support for B3L7B6 as seed ortholog is 100%.
Bootstrap support for D3BMV1 as seed ortholog is 100%.

Group of orthologs #171. Best score 414 bits
Score difference with first non-orthologous sequence - P.knowlesi:414 P.pallidum:414

B3L9W9              	100.00%		D3BKL2              	100.00%
Bootstrap support for B3L9W9 as seed ortholog is 100%.
Bootstrap support for D3BKL2 as seed ortholog is 100%.

Group of orthologs #172. Best score 413 bits
Score difference with first non-orthologous sequence - P.knowlesi:141 P.pallidum:118

B3LCA3              	100.00%		D3BSG3              	100.00%
Bootstrap support for B3LCA3 as seed ortholog is 99%.
Bootstrap support for D3BSG3 as seed ortholog is 98%.

Group of orthologs #173. Best score 411 bits
Score difference with first non-orthologous sequence - P.knowlesi:411 P.pallidum:356

B3LA75              	100.00%		D3B6H9              	100.00%
                    	       		D3B3G3              	16.41%
Bootstrap support for B3LA75 as seed ortholog is 100%.
Bootstrap support for D3B6H9 as seed ortholog is 100%.

Group of orthologs #174. Best score 411 bits
Score difference with first non-orthologous sequence - P.knowlesi:411 P.pallidum:411

B3L6G7              	100.00%		D3AY94              	100.00%
Bootstrap support for B3L6G7 as seed ortholog is 100%.
Bootstrap support for D3AY94 as seed ortholog is 100%.

Group of orthologs #175. Best score 410 bits
Score difference with first non-orthologous sequence - P.knowlesi:410 P.pallidum:410

B3L4G8              	100.00%		D3AXC9              	100.00%
Bootstrap support for B3L4G8 as seed ortholog is 100%.
Bootstrap support for D3AXC9 as seed ortholog is 100%.

Group of orthologs #176. Best score 410 bits
Score difference with first non-orthologous sequence - P.knowlesi:410 P.pallidum:76

B3L729              	100.00%		D3B6I9              	100.00%
Bootstrap support for B3L729 as seed ortholog is 100%.
Bootstrap support for D3B6I9 as seed ortholog is 86%.

Group of orthologs #177. Best score 410 bits
Score difference with first non-orthologous sequence - P.knowlesi:178 P.pallidum:160

B3L0G9              	100.00%		D3BK58              	100.00%
Bootstrap support for B3L0G9 as seed ortholog is 100%.
Bootstrap support for D3BK58 as seed ortholog is 100%.

Group of orthologs #178. Best score 408 bits
Score difference with first non-orthologous sequence - P.knowlesi:408 P.pallidum:408

B3L384              	100.00%		D3AZX3              	100.00%
Bootstrap support for B3L384 as seed ortholog is 100%.
Bootstrap support for D3AZX3 as seed ortholog is 100%.

Group of orthologs #179. Best score 408 bits
Score difference with first non-orthologous sequence - P.knowlesi:408 P.pallidum:408

B3L422              	100.00%		D3BR60              	100.00%
Bootstrap support for B3L422 as seed ortholog is 100%.
Bootstrap support for D3BR60 as seed ortholog is 100%.

Group of orthologs #180. Best score 407 bits
Score difference with first non-orthologous sequence - P.knowlesi:407 P.pallidum:407

B3L7U8              	100.00%		D3BUD8              	100.00%
Bootstrap support for B3L7U8 as seed ortholog is 100%.
Bootstrap support for D3BUD8 as seed ortholog is 100%.

Group of orthologs #181. Best score 406 bits
Score difference with first non-orthologous sequence - P.knowlesi:16 P.pallidum:18

B3L9B1              	100.00%		D3BAR8              	100.00%
Bootstrap support for B3L9B1 as seed ortholog is 68%.
Alternative seed ortholog is B3LD47 (16 bits away from this cluster)
Bootstrap support for D3BAR8 as seed ortholog is 83%.

Group of orthologs #182. Best score 406 bits
Score difference with first non-orthologous sequence - P.knowlesi:406 P.pallidum:406

B3L781              	100.00%		D3BTQ4              	100.00%
Bootstrap support for B3L781 as seed ortholog is 100%.
Bootstrap support for D3BTQ4 as seed ortholog is 100%.

Group of orthologs #183. Best score 405 bits
Score difference with first non-orthologous sequence - P.knowlesi:405 P.pallidum:405

B3LAN7              	100.00%		D3BQ08              	100.00%
Bootstrap support for B3LAN7 as seed ortholog is 100%.
Bootstrap support for D3BQ08 as seed ortholog is 100%.

Group of orthologs #184. Best score 402 bits
Score difference with first non-orthologous sequence - P.knowlesi:402 P.pallidum:402

B3L3M4              	100.00%		D3AY91              	100.00%
Bootstrap support for B3L3M4 as seed ortholog is 100%.
Bootstrap support for D3AY91 as seed ortholog is 100%.

Group of orthologs #185. Best score 399 bits
Score difference with first non-orthologous sequence - P.knowlesi:109 P.pallidum:399

B3LBA5              	100.00%		D3BB39              	100.00%
Bootstrap support for B3LBA5 as seed ortholog is 99%.
Bootstrap support for D3BB39 as seed ortholog is 100%.

Group of orthologs #186. Best score 398 bits
Score difference with first non-orthologous sequence - P.knowlesi:398 P.pallidum:274

B3L0L1              	100.00%		D3B2K0              	100.00%
Bootstrap support for B3L0L1 as seed ortholog is 100%.
Bootstrap support for D3B2K0 as seed ortholog is 100%.

Group of orthologs #187. Best score 398 bits
Score difference with first non-orthologous sequence - P.knowlesi:398 P.pallidum:398

B3L9M2              	100.00%		D3B6S4              	100.00%
Bootstrap support for B3L9M2 as seed ortholog is 100%.
Bootstrap support for D3B6S4 as seed ortholog is 100%.

Group of orthologs #188. Best score 398 bits
Score difference with first non-orthologous sequence - P.knowlesi:398 P.pallidum:334

B3L3R5              	100.00%		D3BFI2              	100.00%
Bootstrap support for B3L3R5 as seed ortholog is 100%.
Bootstrap support for D3BFI2 as seed ortholog is 100%.

Group of orthologs #189. Best score 398 bits
Score difference with first non-orthologous sequence - P.knowlesi:76 P.pallidum:312

B3L4M7              	100.00%		D3BI15              	100.00%
Bootstrap support for B3L4M7 as seed ortholog is 99%.
Bootstrap support for D3BI15 as seed ortholog is 100%.

Group of orthologs #190. Best score 396 bits
Score difference with first non-orthologous sequence - P.knowlesi:396 P.pallidum:396

B3L7Z8              	100.00%		D3AZD2              	100.00%
Bootstrap support for B3L7Z8 as seed ortholog is 100%.
Bootstrap support for D3AZD2 as seed ortholog is 100%.

Group of orthologs #191. Best score 396 bits
Score difference with first non-orthologous sequence - P.knowlesi:396 P.pallidum:396

B3L046              	100.00%		D3BMP9              	100.00%
Bootstrap support for B3L046 as seed ortholog is 100%.
Bootstrap support for D3BMP9 as seed ortholog is 100%.

Group of orthologs #192. Best score 393 bits
Score difference with first non-orthologous sequence - P.knowlesi:393 P.pallidum:393

B3L4D2              	100.00%		D3B8W3              	100.00%
Bootstrap support for B3L4D2 as seed ortholog is 100%.
Bootstrap support for D3B8W3 as seed ortholog is 100%.

Group of orthologs #193. Best score 391 bits
Score difference with first non-orthologous sequence - P.knowlesi:391 P.pallidum:146

B3L878              	100.00%		D3BT28              	100.00%
Bootstrap support for B3L878 as seed ortholog is 100%.
Bootstrap support for D3BT28 as seed ortholog is 99%.

Group of orthologs #194. Best score 386 bits
Score difference with first non-orthologous sequence - P.knowlesi:386 P.pallidum:34

B3KZL1              	100.00%		D3BBA2              	100.00%
                    	       		D3BNB3              	28.56%
                    	       		D3AW28              	5.16%
Bootstrap support for B3KZL1 as seed ortholog is 100%.
Bootstrap support for D3BBA2 as seed ortholog is 67%.
Alternative seed ortholog is D3BG47 (34 bits away from this cluster)

Group of orthologs #195. Best score 386 bits
Score difference with first non-orthologous sequence - P.knowlesi:386 P.pallidum:339

B3L711              	100.00%		D3BBC2              	100.00%
Bootstrap support for B3L711 as seed ortholog is 100%.
Bootstrap support for D3BBC2 as seed ortholog is 100%.

Group of orthologs #196. Best score 384 bits
Score difference with first non-orthologous sequence - P.knowlesi:226 P.pallidum:224

B3L520              	100.00%		D3BQP4              	100.00%
                    	       		D3AVH5              	12.36%
                    	       		D3BFH7              	5.98%
Bootstrap support for B3L520 as seed ortholog is 100%.
Bootstrap support for D3BQP4 as seed ortholog is 99%.

Group of orthologs #197. Best score 381 bits
Score difference with first non-orthologous sequence - P.knowlesi:381 P.pallidum:51

B3L8H3              	100.00%		D3BGI5              	100.00%
B3L6N3              	8.97%		D3BK04              	23.19%
                    	       		D3BA71              	22.44%
                    	       		D3BKB9              	19.96%
                    	       		D3BPD4              	17.79%
                    	       		D3B008              	10.11%
                    	       		D3BG45              	5.02%
Bootstrap support for B3L8H3 as seed ortholog is 100%.
Bootstrap support for D3BGI5 as seed ortholog is 80%.

Group of orthologs #198. Best score 381 bits
Score difference with first non-orthologous sequence - P.knowlesi:72 P.pallidum:141

B3L611              	100.00%		D3B2D6              	100.00%
                    	       		D3AZ71              	8.09%
Bootstrap support for B3L611 as seed ortholog is 94%.
Bootstrap support for D3B2D6 as seed ortholog is 99%.

Group of orthologs #199. Best score 381 bits
Score difference with first non-orthologous sequence - P.knowlesi:50 P.pallidum:35

B3L2U9              	100.00%		D3BLI7              	100.00%
                    	       		D3BKP8              	10.22%
Bootstrap support for B3L2U9 as seed ortholog is 97%.
Bootstrap support for D3BLI7 as seed ortholog is 88%.

Group of orthologs #200. Best score 380 bits
Score difference with first non-orthologous sequence - P.knowlesi:380 P.pallidum:380

B3L4Q7              	100.00%		D3BAM6              	100.00%
Bootstrap support for B3L4Q7 as seed ortholog is 100%.
Bootstrap support for D3BAM6 as seed ortholog is 100%.

Group of orthologs #201. Best score 380 bits
Score difference with first non-orthologous sequence - P.knowlesi:380 P.pallidum:380

B3L6F2              	100.00%		D3BPD1              	100.00%
Bootstrap support for B3L6F2 as seed ortholog is 100%.
Bootstrap support for D3BPD1 as seed ortholog is 100%.

Group of orthologs #202. Best score 379 bits
Score difference with first non-orthologous sequence - P.knowlesi:379 P.pallidum:379

B3L8M2              	100.00%		D3B072              	100.00%
Bootstrap support for B3L8M2 as seed ortholog is 100%.
Bootstrap support for D3B072 as seed ortholog is 100%.

Group of orthologs #203. Best score 379 bits
Score difference with first non-orthologous sequence - P.knowlesi:379 P.pallidum:379

B3L108              	100.00%		D3BE62              	100.00%
Bootstrap support for B3L108 as seed ortholog is 100%.
Bootstrap support for D3BE62 as seed ortholog is 100%.

Group of orthologs #204. Best score 379 bits
Score difference with first non-orthologous sequence - P.knowlesi:379 P.pallidum:379

B3L6G4              	100.00%		D3BQM7              	100.00%
Bootstrap support for B3L6G4 as seed ortholog is 100%.
Bootstrap support for D3BQM7 as seed ortholog is 100%.

Group of orthologs #205. Best score 376 bits
Score difference with first non-orthologous sequence - P.knowlesi:376 P.pallidum:376

B3L6V4              	100.00%		D3BP70              	100.00%
Bootstrap support for B3L6V4 as seed ortholog is 100%.
Bootstrap support for D3BP70 as seed ortholog is 100%.

Group of orthologs #206. Best score 374 bits
Score difference with first non-orthologous sequence - P.knowlesi:292 P.pallidum:272

B3L4H6              	100.00%		D3AVR8              	100.00%
Bootstrap support for B3L4H6 as seed ortholog is 100%.
Bootstrap support for D3AVR8 as seed ortholog is 100%.

Group of orthologs #207. Best score 374 bits
Score difference with first non-orthologous sequence - P.knowlesi:374 P.pallidum:374

B3L7D0              	100.00%		D3AY61              	100.00%
Bootstrap support for B3L7D0 as seed ortholog is 100%.
Bootstrap support for D3AY61 as seed ortholog is 100%.

Group of orthologs #208. Best score 369 bits
Score difference with first non-orthologous sequence - P.knowlesi:369 P.pallidum:369

B3L2K6              	100.00%		D3AY16              	100.00%
Bootstrap support for B3L2K6 as seed ortholog is 100%.
Bootstrap support for D3AY16 as seed ortholog is 100%.

Group of orthologs #209. Best score 367 bits
Score difference with first non-orthologous sequence - P.knowlesi:367 P.pallidum:367

B3L4Y1              	100.00%		D3B4I5              	100.00%
Bootstrap support for B3L4Y1 as seed ortholog is 100%.
Bootstrap support for D3B4I5 as seed ortholog is 100%.

Group of orthologs #210. Best score 367 bits
Score difference with first non-orthologous sequence - P.knowlesi:367 P.pallidum:367

B3L8F2              	100.00%		D3B481              	100.00%
Bootstrap support for B3L8F2 as seed ortholog is 100%.
Bootstrap support for D3B481 as seed ortholog is 100%.

Group of orthologs #211. Best score 366 bits
Score difference with first non-orthologous sequence - P.knowlesi:366 P.pallidum:366

B3LC69              	100.00%		D3BG72              	100.00%
Bootstrap support for B3LC69 as seed ortholog is 100%.
Bootstrap support for D3BG72 as seed ortholog is 100%.

Group of orthologs #212. Best score 365 bits
Score difference with first non-orthologous sequence - P.knowlesi:365 P.pallidum:293

B3LCJ0              	100.00%		D3AYY7              	100.00%
Bootstrap support for B3LCJ0 as seed ortholog is 100%.
Bootstrap support for D3AYY7 as seed ortholog is 100%.

Group of orthologs #213. Best score 364 bits
Score difference with first non-orthologous sequence - P.knowlesi:70 P.pallidum:364

B3L0N7              	100.00%		D3AYA4              	100.00%
Bootstrap support for B3L0N7 as seed ortholog is 97%.
Bootstrap support for D3AYA4 as seed ortholog is 100%.

Group of orthologs #214. Best score 364 bits
Score difference with first non-orthologous sequence - P.knowlesi:20 P.pallidum:364

B3L5Q9              	100.00%		D3B0J2              	100.00%
Bootstrap support for B3L5Q9 as seed ortholog is 69%.
Alternative seed ortholog is B3L2D6 (20 bits away from this cluster)
Bootstrap support for D3B0J2 as seed ortholog is 100%.

Group of orthologs #215. Best score 364 bits
Score difference with first non-orthologous sequence - P.knowlesi:220 P.pallidum:364

B3L070              	100.00%		D3BEX2              	100.00%
Bootstrap support for B3L070 as seed ortholog is 100%.
Bootstrap support for D3BEX2 as seed ortholog is 100%.

Group of orthologs #216. Best score 363 bits
Score difference with first non-orthologous sequence - P.knowlesi:363 P.pallidum:214

B3LCN2              	100.00%		D3AVQ3              	100.00%
Bootstrap support for B3LCN2 as seed ortholog is 100%.
Bootstrap support for D3AVQ3 as seed ortholog is 100%.

Group of orthologs #217. Best score 361 bits
Score difference with first non-orthologous sequence - P.knowlesi:361 P.pallidum:146

B3LAB7              	100.00%		D3AYZ6              	100.00%
B3KZ15              	24.21%		
Bootstrap support for B3LAB7 as seed ortholog is 100%.
Bootstrap support for D3AYZ6 as seed ortholog is 99%.

Group of orthologs #218. Best score 361 bits
Score difference with first non-orthologous sequence - P.knowlesi:132 P.pallidum:361

B3LAI0              	100.00%		D3BD10              	100.00%
Bootstrap support for B3LAI0 as seed ortholog is 99%.
Bootstrap support for D3BD10 as seed ortholog is 100%.

Group of orthologs #219. Best score 360 bits
Score difference with first non-orthologous sequence - P.knowlesi:360 P.pallidum:360

B3L2D0              	100.00%		D3B5K4              	100.00%
Bootstrap support for B3L2D0 as seed ortholog is 100%.
Bootstrap support for D3B5K4 as seed ortholog is 100%.

Group of orthologs #220. Best score 359 bits
Score difference with first non-orthologous sequence - P.knowlesi:359 P.pallidum:359

B3KZH9              	100.00%		D3BCX3              	100.00%
Bootstrap support for B3KZH9 as seed ortholog is 100%.
Bootstrap support for D3BCX3 as seed ortholog is 100%.

Group of orthologs #221. Best score 359 bits
Score difference with first non-orthologous sequence - P.knowlesi:205 P.pallidum:102

B3KZP7              	100.00%		D3BEH3              	100.00%
Bootstrap support for B3KZP7 as seed ortholog is 99%.
Bootstrap support for D3BEH3 as seed ortholog is 97%.

Group of orthologs #222. Best score 358 bits
Score difference with first non-orthologous sequence - P.knowlesi:358 P.pallidum:358

B3L4J2              	100.00%		D3BMN8              	100.00%
Bootstrap support for B3L4J2 as seed ortholog is 100%.
Bootstrap support for D3BMN8 as seed ortholog is 100%.

Group of orthologs #223. Best score 358 bits
Score difference with first non-orthologous sequence - P.knowlesi:358 P.pallidum:358

B3L0T5              	100.00%		D3BUL3              	100.00%
Bootstrap support for B3L0T5 as seed ortholog is 100%.
Bootstrap support for D3BUL3 as seed ortholog is 100%.

Group of orthologs #224. Best score 356 bits
Score difference with first non-orthologous sequence - P.knowlesi:356 P.pallidum:356

B3LAT9              	100.00%		D3B7T8              	100.00%
Bootstrap support for B3LAT9 as seed ortholog is 100%.
Bootstrap support for D3B7T8 as seed ortholog is 100%.

Group of orthologs #225. Best score 354 bits
Score difference with first non-orthologous sequence - P.knowlesi:139 P.pallidum:121

B3L3U6              	100.00%		D3AZS9              	100.00%
Bootstrap support for B3L3U6 as seed ortholog is 99%.
Bootstrap support for D3AZS9 as seed ortholog is 99%.

Group of orthologs #226. Best score 354 bits
Score difference with first non-orthologous sequence - P.knowlesi:245 P.pallidum:203

B3L2D4              	100.00%		D3B2T1              	100.00%
Bootstrap support for B3L2D4 as seed ortholog is 100%.
Bootstrap support for D3B2T1 as seed ortholog is 100%.

Group of orthologs #227. Best score 354 bits
Score difference with first non-orthologous sequence - P.knowlesi:354 P.pallidum:354

B3LA33              	100.00%		D3BEC2              	100.00%
Bootstrap support for B3LA33 as seed ortholog is 100%.
Bootstrap support for D3BEC2 as seed ortholog is 100%.

Group of orthologs #228. Best score 352 bits
Score difference with first non-orthologous sequence - P.knowlesi:352 P.pallidum:352

B3L1M7              	100.00%		D3BDY0              	100.00%
Bootstrap support for B3L1M7 as seed ortholog is 100%.
Bootstrap support for D3BDY0 as seed ortholog is 100%.

Group of orthologs #229. Best score 351 bits
Score difference with first non-orthologous sequence - P.knowlesi:351 P.pallidum:351

B3L712              	100.00%		D3AZB0              	100.00%
Bootstrap support for B3L712 as seed ortholog is 100%.
Bootstrap support for D3AZB0 as seed ortholog is 100%.

Group of orthologs #230. Best score 351 bits
Score difference with first non-orthologous sequence - P.knowlesi:193 P.pallidum:351

B3L769              	100.00%		D3BM76              	100.00%
Bootstrap support for B3L769 as seed ortholog is 100%.
Bootstrap support for D3BM76 as seed ortholog is 100%.

Group of orthologs #231. Best score 350 bits
Score difference with first non-orthologous sequence - P.knowlesi:250 P.pallidum:350

B3L699              	100.00%		D3BFD7              	100.00%
Bootstrap support for B3L699 as seed ortholog is 100%.
Bootstrap support for D3BFD7 as seed ortholog is 100%.

Group of orthologs #232. Best score 349 bits
Score difference with first non-orthologous sequence - P.knowlesi:349 P.pallidum:119

B3L1X3              	100.00%		D3BRA7              	100.00%
Bootstrap support for B3L1X3 as seed ortholog is 100%.
Bootstrap support for D3BRA7 as seed ortholog is 98%.

Group of orthologs #233. Best score 348 bits
Score difference with first non-orthologous sequence - P.knowlesi:348 P.pallidum:183

B3LC21              	100.00%		D3BV44              	100.00%
Bootstrap support for B3LC21 as seed ortholog is 100%.
Bootstrap support for D3BV44 as seed ortholog is 99%.

Group of orthologs #234. Best score 347 bits
Score difference with first non-orthologous sequence - P.knowlesi:347 P.pallidum:347

B3L299              	100.00%		D3B6X9              	100.00%
Bootstrap support for B3L299 as seed ortholog is 100%.
Bootstrap support for D3B6X9 as seed ortholog is 100%.

Group of orthologs #235. Best score 344 bits
Score difference with first non-orthologous sequence - P.knowlesi:344 P.pallidum:344

B3LAN9              	100.00%		D3AXR9              	100.00%
Bootstrap support for B3LAN9 as seed ortholog is 100%.
Bootstrap support for D3AXR9 as seed ortholog is 100%.

Group of orthologs #236. Best score 344 bits
Score difference with first non-orthologous sequence - P.knowlesi:168 P.pallidum:344

B3L436              	100.00%		D3BAU8              	100.00%
Bootstrap support for B3L436 as seed ortholog is 99%.
Bootstrap support for D3BAU8 as seed ortholog is 100%.

Group of orthologs #237. Best score 343 bits
Score difference with first non-orthologous sequence - P.knowlesi:343 P.pallidum:343

B3L4Y8              	100.00%		D3BCL2              	100.00%
Bootstrap support for B3L4Y8 as seed ortholog is 100%.
Bootstrap support for D3BCL2 as seed ortholog is 100%.

Group of orthologs #238. Best score 342 bits
Score difference with first non-orthologous sequence - P.knowlesi:342 P.pallidum:342

B3L783              	100.00%		D3AZ34              	100.00%
Bootstrap support for B3L783 as seed ortholog is 100%.
Bootstrap support for D3AZ34 as seed ortholog is 100%.

Group of orthologs #239. Best score 340 bits
Score difference with first non-orthologous sequence - P.knowlesi:175 P.pallidum:111

B3L9J0              	100.00%		D3AZ75              	100.00%
Bootstrap support for B3L9J0 as seed ortholog is 100%.
Bootstrap support for D3AZ75 as seed ortholog is 99%.

Group of orthologs #240. Best score 339 bits
Score difference with first non-orthologous sequence - P.knowlesi:339 P.pallidum:339

B3KZ23              	100.00%		D3B3Z7              	100.00%
Bootstrap support for B3KZ23 as seed ortholog is 100%.
Bootstrap support for D3B3Z7 as seed ortholog is 100%.

Group of orthologs #241. Best score 339 bits
Score difference with first non-orthologous sequence - P.knowlesi:339 P.pallidum:339

B3L0I9              	100.00%		D3BQC3              	100.00%
Bootstrap support for B3L0I9 as seed ortholog is 100%.
Bootstrap support for D3BQC3 as seed ortholog is 100%.

Group of orthologs #242. Best score 338 bits
Score difference with first non-orthologous sequence - P.knowlesi:338 P.pallidum:282

B3LDE8              	100.00%		D3B0D6              	100.00%
Bootstrap support for B3LDE8 as seed ortholog is 100%.
Bootstrap support for D3B0D6 as seed ortholog is 100%.

Group of orthologs #243. Best score 338 bits
Score difference with first non-orthologous sequence - P.knowlesi:338 P.pallidum:338

B3L7J6              	100.00%		D3BPW8              	100.00%
Bootstrap support for B3L7J6 as seed ortholog is 100%.
Bootstrap support for D3BPW8 as seed ortholog is 100%.

Group of orthologs #244. Best score 337 bits
Score difference with first non-orthologous sequence - P.knowlesi:337 P.pallidum:337

B3L359              	100.00%		D3BB49              	100.00%
                    	       		D3BUW0              	21.33%
                    	       		D3BT51              	12.55%
Bootstrap support for B3L359 as seed ortholog is 100%.
Bootstrap support for D3BB49 as seed ortholog is 100%.

Group of orthologs #245. Best score 337 bits
Score difference with first non-orthologous sequence - P.knowlesi:244 P.pallidum:225

B3L1F8              	100.00%		D3AYX0              	100.00%
Bootstrap support for B3L1F8 as seed ortholog is 96%.
Bootstrap support for D3AYX0 as seed ortholog is 86%.

Group of orthologs #246. Best score 337 bits
Score difference with first non-orthologous sequence - P.knowlesi:272 P.pallidum:337

B3KZU1              	100.00%		D3BF27              	100.00%
Bootstrap support for B3KZU1 as seed ortholog is 100%.
Bootstrap support for D3BF27 as seed ortholog is 100%.

Group of orthologs #247. Best score 337 bits
Score difference with first non-orthologous sequence - P.knowlesi:337 P.pallidum:337

B3L9M5              	100.00%		D3B7I3              	100.00%
Bootstrap support for B3L9M5 as seed ortholog is 100%.
Bootstrap support for D3B7I3 as seed ortholog is 100%.

Group of orthologs #248. Best score 337 bits
Score difference with first non-orthologous sequence - P.knowlesi:337 P.pallidum:337

B3L6J8              	100.00%		D3BJC7              	100.00%
Bootstrap support for B3L6J8 as seed ortholog is 100%.
Bootstrap support for D3BJC7 as seed ortholog is 100%.

Group of orthologs #249. Best score 336 bits
Score difference with first non-orthologous sequence - P.knowlesi:336 P.pallidum:336

B3L7F1              	100.00%		D3BU83              	100.00%
Bootstrap support for B3L7F1 as seed ortholog is 100%.
Bootstrap support for D3BU83 as seed ortholog is 100%.

Group of orthologs #250. Best score 336 bits
Score difference with first non-orthologous sequence - P.knowlesi:336 P.pallidum:336

B3LC55              	100.00%		D3BQ86              	100.00%
Bootstrap support for B3LC55 as seed ortholog is 100%.
Bootstrap support for D3BQ86 as seed ortholog is 100%.

Group of orthologs #251. Best score 335 bits
Score difference with first non-orthologous sequence - P.knowlesi:335 P.pallidum:335

B3L6H1              	100.00%		D3BS65              	100.00%
Bootstrap support for B3L6H1 as seed ortholog is 100%.
Bootstrap support for D3BS65 as seed ortholog is 100%.

Group of orthologs #252. Best score 333 bits
Score difference with first non-orthologous sequence - P.knowlesi:333 P.pallidum:213

B3L4U7              	100.00%		D3B695              	100.00%
Bootstrap support for B3L4U7 as seed ortholog is 100%.
Bootstrap support for D3B695 as seed ortholog is 100%.

Group of orthologs #253. Best score 332 bits
Score difference with first non-orthologous sequence - P.knowlesi:332 P.pallidum:332

B3LD14              	100.00%		D3B3L3              	100.00%
Bootstrap support for B3LD14 as seed ortholog is 100%.
Bootstrap support for D3B3L3 as seed ortholog is 100%.

Group of orthologs #254. Best score 332 bits
Score difference with first non-orthologous sequence - P.knowlesi:218 P.pallidum:332

B3L014              	100.00%		D3BN56              	100.00%
Bootstrap support for B3L014 as seed ortholog is 100%.
Bootstrap support for D3BN56 as seed ortholog is 100%.

Group of orthologs #255. Best score 331 bits
Score difference with first non-orthologous sequence - P.knowlesi:331 P.pallidum:197

B3L6T8              	100.00%		D3B2H8              	100.00%
Bootstrap support for B3L6T8 as seed ortholog is 100%.
Bootstrap support for D3B2H8 as seed ortholog is 100%.

Group of orthologs #256. Best score 330 bits
Score difference with first non-orthologous sequence - P.knowlesi:330 P.pallidum:90

B3L4Y6              	100.00%		D3B892              	100.00%
Bootstrap support for B3L4Y6 as seed ortholog is 100%.
Bootstrap support for D3B892 as seed ortholog is 93%.

Group of orthologs #257. Best score 330 bits
Score difference with first non-orthologous sequence - P.knowlesi:330 P.pallidum:173

B3KZP9              	100.00%		D3BFF8              	100.00%
Bootstrap support for B3KZP9 as seed ortholog is 100%.
Bootstrap support for D3BFF8 as seed ortholog is 99%.

Group of orthologs #258. Best score 330 bits
Score difference with first non-orthologous sequence - P.knowlesi:330 P.pallidum:330

B3L9T7              	100.00%		D3BE83              	100.00%
Bootstrap support for B3L9T7 as seed ortholog is 100%.
Bootstrap support for D3BE83 as seed ortholog is 100%.

Group of orthologs #259. Best score 330 bits
Score difference with first non-orthologous sequence - P.knowlesi:330 P.pallidum:330

B3LDF3              	100.00%		D3BEA1              	100.00%
Bootstrap support for B3LDF3 as seed ortholog is 100%.
Bootstrap support for D3BEA1 as seed ortholog is 100%.

Group of orthologs #260. Best score 329 bits
Score difference with first non-orthologous sequence - P.knowlesi:329 P.pallidum:114

B3L322              	100.00%		D3B9A5              	100.00%
Bootstrap support for B3L322 as seed ortholog is 100%.
Bootstrap support for D3B9A5 as seed ortholog is 99%.

Group of orthologs #261. Best score 329 bits
Score difference with first non-orthologous sequence - P.knowlesi:329 P.pallidum:329

B3L9U8              	100.00%		D3B6G8              	100.00%
Bootstrap support for B3L9U8 as seed ortholog is 100%.
Bootstrap support for D3B6G8 as seed ortholog is 100%.

Group of orthologs #262. Best score 329 bits
Score difference with first non-orthologous sequence - P.knowlesi:329 P.pallidum:114

B3LAE9              	100.00%		D3BNT7              	100.00%
Bootstrap support for B3LAE9 as seed ortholog is 100%.
Bootstrap support for D3BNT7 as seed ortholog is 99%.

Group of orthologs #263. Best score 327 bits
Score difference with first non-orthologous sequence - P.knowlesi:327 P.pallidum:200

B3L310              	100.00%		D3B6D9              	100.00%
Bootstrap support for B3L310 as seed ortholog is 100%.
Bootstrap support for D3B6D9 as seed ortholog is 99%.

Group of orthologs #264. Best score 325 bits
Score difference with first non-orthologous sequence - P.knowlesi:325 P.pallidum:213

B3LAG9              	100.00%		D3BCL5              	100.00%
Bootstrap support for B3LAG9 as seed ortholog is 100%.
Bootstrap support for D3BCL5 as seed ortholog is 97%.

Group of orthologs #265. Best score 320 bits
Score difference with first non-orthologous sequence - P.knowlesi:320 P.pallidum:320

B3LBY5              	100.00%		D3AWJ9              	100.00%
Bootstrap support for B3LBY5 as seed ortholog is 100%.
Bootstrap support for D3AWJ9 as seed ortholog is 100%.

Group of orthologs #266. Best score 319 bits
Score difference with first non-orthologous sequence - P.knowlesi:319 P.pallidum:319

B3L3U0              	100.00%		D3B501              	100.00%
Bootstrap support for B3L3U0 as seed ortholog is 100%.
Bootstrap support for D3B501 as seed ortholog is 100%.

Group of orthologs #267. Best score 318 bits
Score difference with first non-orthologous sequence - P.knowlesi:318 P.pallidum:78

B3L831              	100.00%		D3B9P6              	100.00%
Bootstrap support for B3L831 as seed ortholog is 100%.
Bootstrap support for D3B9P6 as seed ortholog is 97%.

Group of orthologs #268. Best score 317 bits
Score difference with first non-orthologous sequence - P.knowlesi:317 P.pallidum:317

B3L8L1              	100.00%		D3BBL0              	100.00%
Bootstrap support for B3L8L1 as seed ortholog is 100%.
Bootstrap support for D3BBL0 as seed ortholog is 100%.

Group of orthologs #269. Best score 315 bits
Score difference with first non-orthologous sequence - P.knowlesi:315 P.pallidum:315

B3L1W1              	100.00%		D3AZM5              	100.00%
Bootstrap support for B3L1W1 as seed ortholog is 100%.
Bootstrap support for D3AZM5 as seed ortholog is 100%.

Group of orthologs #270. Best score 314 bits
Score difference with first non-orthologous sequence - P.knowlesi:314 P.pallidum:314

B3L691              	100.00%		D3BQG1              	100.00%
Bootstrap support for B3L691 as seed ortholog is 100%.
Bootstrap support for D3BQG1 as seed ortholog is 100%.

Group of orthologs #271. Best score 312 bits
Score difference with first non-orthologous sequence - P.knowlesi:312 P.pallidum:312

B3L268              	100.00%		D3AXJ0              	100.00%
Bootstrap support for B3L268 as seed ortholog is 100%.
Bootstrap support for D3AXJ0 as seed ortholog is 100%.

Group of orthologs #272. Best score 312 bits
Score difference with first non-orthologous sequence - P.knowlesi:312 P.pallidum:312

B3L1Y4              	100.00%		D3B4P1              	100.00%
Bootstrap support for B3L1Y4 as seed ortholog is 100%.
Bootstrap support for D3B4P1 as seed ortholog is 100%.

Group of orthologs #273. Best score 312 bits
Score difference with first non-orthologous sequence - P.knowlesi:186 P.pallidum:199

B3LDB1              	100.00%		D3BIR2              	100.00%
Bootstrap support for B3LDB1 as seed ortholog is 100%.
Bootstrap support for D3BIR2 as seed ortholog is 100%.

Group of orthologs #274. Best score 311 bits
Score difference with first non-orthologous sequence - P.knowlesi:311 P.pallidum:228

B3L122              	100.00%		D3BE97              	100.00%
Bootstrap support for B3L122 as seed ortholog is 100%.
Bootstrap support for D3BE97 as seed ortholog is 100%.

Group of orthologs #275. Best score 310 bits
Score difference with first non-orthologous sequence - P.knowlesi:310 P.pallidum:310

B3L5Q6              	100.00%		D3BBR7              	100.00%
Bootstrap support for B3L5Q6 as seed ortholog is 100%.
Bootstrap support for D3BBR7 as seed ortholog is 100%.

Group of orthologs #276. Best score 309 bits
Score difference with first non-orthologous sequence - P.knowlesi:309 P.pallidum:309

B3LAL1              	100.00%		D3BMY2              	100.00%
                    	       		D3B0I3              	11.77%
Bootstrap support for B3LAL1 as seed ortholog is 100%.
Bootstrap support for D3BMY2 as seed ortholog is 100%.

Group of orthologs #277. Best score 309 bits
Score difference with first non-orthologous sequence - P.knowlesi:309 P.pallidum:309

B3LBF1              	100.00%		D3AWT2              	100.00%
Bootstrap support for B3LBF1 as seed ortholog is 100%.
Bootstrap support for D3AWT2 as seed ortholog is 100%.

Group of orthologs #278. Best score 309 bits
Score difference with first non-orthologous sequence - P.knowlesi:309 P.pallidum:114

B3LAC9              	100.00%		D3B626              	100.00%
Bootstrap support for B3LAC9 as seed ortholog is 100%.
Bootstrap support for D3B626 as seed ortholog is 99%.

Group of orthologs #279. Best score 306 bits
Score difference with first non-orthologous sequence - P.knowlesi:212 P.pallidum:144

B3L1B8              	100.00%		D3AVX5              	100.00%
Bootstrap support for B3L1B8 as seed ortholog is 100%.
Bootstrap support for D3AVX5 as seed ortholog is 100%.

Group of orthologs #280. Best score 306 bits
Score difference with first non-orthologous sequence - P.knowlesi:306 P.pallidum:306

B3LAM7              	100.00%		D3B4Z6              	100.00%
Bootstrap support for B3LAM7 as seed ortholog is 100%.
Bootstrap support for D3B4Z6 as seed ortholog is 100%.

Group of orthologs #281. Best score 305 bits
Score difference with first non-orthologous sequence - P.knowlesi:305 P.pallidum:305

B3L1L0              	100.00%		D3BKC5              	100.00%
B3L992              	99.73%		
Bootstrap support for B3L1L0 as seed ortholog is 100%.
Bootstrap support for D3BKC5 as seed ortholog is 100%.

Group of orthologs #282. Best score 304 bits
Score difference with first non-orthologous sequence - P.knowlesi:304 P.pallidum:304

B3L351              	100.00%		D3BA10              	100.00%
Bootstrap support for B3L351 as seed ortholog is 100%.
Bootstrap support for D3BA10 as seed ortholog is 100%.

Group of orthologs #283. Best score 304 bits
Score difference with first non-orthologous sequence - P.knowlesi:304 P.pallidum:304

B3L504              	100.00%		D3BMD5              	100.00%
Bootstrap support for B3L504 as seed ortholog is 100%.
Bootstrap support for D3BMD5 as seed ortholog is 100%.

Group of orthologs #284. Best score 303 bits
Score difference with first non-orthologous sequence - P.knowlesi:303 P.pallidum:303

B3LB36              	100.00%		D3BK65              	100.00%
Bootstrap support for B3LB36 as seed ortholog is 100%.
Bootstrap support for D3BK65 as seed ortholog is 100%.

Group of orthologs #285. Best score 301 bits
Score difference with first non-orthologous sequence - P.knowlesi:301 P.pallidum:301

B3L866              	100.00%		D3B0U2              	100.00%
Bootstrap support for B3L866 as seed ortholog is 100%.
Bootstrap support for D3B0U2 as seed ortholog is 100%.

Group of orthologs #286. Best score 300 bits
Score difference with first non-orthologous sequence - P.knowlesi:300 P.pallidum:300

B3L1T8              	100.00%		D3AYA8              	100.00%
Bootstrap support for B3L1T8 as seed ortholog is 100%.
Bootstrap support for D3AYA8 as seed ortholog is 100%.

Group of orthologs #287. Best score 300 bits
Score difference with first non-orthologous sequence - P.knowlesi:300 P.pallidum:240

B3L0G0              	100.00%		D3BNN4              	100.00%
Bootstrap support for B3L0G0 as seed ortholog is 100%.
Bootstrap support for D3BNN4 as seed ortholog is 99%.

Group of orthologs #288. Best score 299 bits
Score difference with first non-orthologous sequence - P.knowlesi:299 P.pallidum:299

B3L228              	100.00%		D3B3W0              	100.00%
Bootstrap support for B3L228 as seed ortholog is 100%.
Bootstrap support for D3B3W0 as seed ortholog is 100%.

Group of orthologs #289. Best score 297 bits
Score difference with first non-orthologous sequence - P.knowlesi:297 P.pallidum:297

B3L1G8              	100.00%		D3B3Z0              	100.00%
Bootstrap support for B3L1G8 as seed ortholog is 100%.
Bootstrap support for D3B3Z0 as seed ortholog is 100%.

Group of orthologs #290. Best score 297 bits
Score difference with first non-orthologous sequence - P.knowlesi:297 P.pallidum:297

B3L021              	100.00%		D3BBG6              	100.00%
Bootstrap support for B3L021 as seed ortholog is 100%.
Bootstrap support for D3BBG6 as seed ortholog is 100%.

Group of orthologs #291. Best score 297 bits
Score difference with first non-orthologous sequence - P.knowlesi:297 P.pallidum:297

B3L7E4              	100.00%		D3BKN6              	100.00%
Bootstrap support for B3L7E4 as seed ortholog is 100%.
Bootstrap support for D3BKN6 as seed ortholog is 100%.

Group of orthologs #292. Best score 296 bits
Score difference with first non-orthologous sequence - P.knowlesi:103 P.pallidum:75

B3L1W8              	100.00%		D3B3T9              	100.00%
Bootstrap support for B3L1W8 as seed ortholog is 100%.
Bootstrap support for D3B3T9 as seed ortholog is 99%.

Group of orthologs #293. Best score 296 bits
Score difference with first non-orthologous sequence - P.knowlesi:296 P.pallidum:296

B3L0Z7              	100.00%		D3BII4              	100.00%
Bootstrap support for B3L0Z7 as seed ortholog is 100%.
Bootstrap support for D3BII4 as seed ortholog is 100%.

Group of orthologs #294. Best score 295 bits
Score difference with first non-orthologous sequence - P.knowlesi:182 P.pallidum:295

B3LBU1              	100.00%		D3AZG6              	100.00%
Bootstrap support for B3LBU1 as seed ortholog is 100%.
Bootstrap support for D3AZG6 as seed ortholog is 100%.

Group of orthologs #295. Best score 295 bits
Score difference with first non-orthologous sequence - P.knowlesi:295 P.pallidum:295

B3LA93              	100.00%		D3BC39              	100.00%
Bootstrap support for B3LA93 as seed ortholog is 100%.
Bootstrap support for D3BC39 as seed ortholog is 100%.

Group of orthologs #296. Best score 295 bits
Score difference with first non-orthologous sequence - P.knowlesi:295 P.pallidum:295

B3L598              	100.00%		D3BHT0              	100.00%
Bootstrap support for B3L598 as seed ortholog is 100%.
Bootstrap support for D3BHT0 as seed ortholog is 100%.

Group of orthologs #297. Best score 294 bits
Score difference with first non-orthologous sequence - P.knowlesi:71 P.pallidum:111

B3L1I7              	100.00%		D3B491              	100.00%
Bootstrap support for B3L1I7 as seed ortholog is 97%.
Bootstrap support for D3B491 as seed ortholog is 99%.

Group of orthologs #298. Best score 293 bits
Score difference with first non-orthologous sequence - P.knowlesi:126 P.pallidum:136

B3L646              	100.00%		D3BET6              	100.00%
Bootstrap support for B3L646 as seed ortholog is 99%.
Bootstrap support for D3BET6 as seed ortholog is 99%.

Group of orthologs #299. Best score 292 bits
Score difference with first non-orthologous sequence - P.knowlesi:292 P.pallidum:292

B3L9B3              	100.00%		D3B606              	100.00%
Bootstrap support for B3L9B3 as seed ortholog is 100%.
Bootstrap support for D3B606 as seed ortholog is 100%.

Group of orthologs #300. Best score 292 bits
Score difference with first non-orthologous sequence - P.knowlesi:292 P.pallidum:292

B3KZC4              	100.00%		D3BQX1              	100.00%
Bootstrap support for B3KZC4 as seed ortholog is 100%.
Bootstrap support for D3BQX1 as seed ortholog is 100%.

Group of orthologs #301. Best score 292 bits
Score difference with first non-orthologous sequence - P.knowlesi:130 P.pallidum:176

B3LBB4              	100.00%		D3BUD0              	100.00%
Bootstrap support for B3LBB4 as seed ortholog is 99%.
Bootstrap support for D3BUD0 as seed ortholog is 99%.

Group of orthologs #302. Best score 290 bits
Score difference with first non-orthologous sequence - P.knowlesi:290 P.pallidum:290

B3L7S7              	100.00%		D3AVG7              	100.00%
Bootstrap support for B3L7S7 as seed ortholog is 100%.
Bootstrap support for D3AVG7 as seed ortholog is 100%.

Group of orthologs #303. Best score 290 bits
Score difference with first non-orthologous sequence - P.knowlesi:290 P.pallidum:290

B3LCG7              	100.00%		D3BBS1              	100.00%
Bootstrap support for B3LCG7 as seed ortholog is 100%.
Bootstrap support for D3BBS1 as seed ortholog is 100%.

Group of orthologs #304. Best score 289 bits
Score difference with first non-orthologous sequence - P.knowlesi:289 P.pallidum:289

B3L5A9              	100.00%		D3AX76              	100.00%
Bootstrap support for B3L5A9 as seed ortholog is 100%.
Bootstrap support for D3AX76 as seed ortholog is 100%.

Group of orthologs #305. Best score 287 bits
Score difference with first non-orthologous sequence - P.knowlesi:287 P.pallidum:287

B3LAL7              	100.00%		D3BLP0              	100.00%
Bootstrap support for B3LAL7 as seed ortholog is 100%.
Bootstrap support for D3BLP0 as seed ortholog is 100%.

Group of orthologs #306. Best score 287 bits
Score difference with first non-orthologous sequence - P.knowlesi:183 P.pallidum:287

B3LCG6              	100.00%		D3BR13              	100.00%
Bootstrap support for B3LCG6 as seed ortholog is 100%.
Bootstrap support for D3BR13 as seed ortholog is 100%.

Group of orthologs #307. Best score 285 bits
Score difference with first non-orthologous sequence - P.knowlesi:285 P.pallidum:285

B3L7S4              	100.00%		D3BNF4              	100.00%
Bootstrap support for B3L7S4 as seed ortholog is 100%.
Bootstrap support for D3BNF4 as seed ortholog is 100%.

Group of orthologs #308. Best score 284 bits
Score difference with first non-orthologous sequence - P.knowlesi:284 P.pallidum:284

B3L5I1              	100.00%		D3B6K6              	100.00%
Bootstrap support for B3L5I1 as seed ortholog is 100%.
Bootstrap support for D3B6K6 as seed ortholog is 100%.

Group of orthologs #309. Best score 284 bits
Score difference with first non-orthologous sequence - P.knowlesi:284 P.pallidum:284

B3L9C8              	100.00%		D3B3A5              	100.00%
Bootstrap support for B3L9C8 as seed ortholog is 100%.
Bootstrap support for D3B3A5 as seed ortholog is 100%.

Group of orthologs #310. Best score 282 bits
Score difference with first non-orthologous sequence - P.knowlesi:159 P.pallidum:102

B3L342              	100.00%		D3BUX2              	100.00%
Bootstrap support for B3L342 as seed ortholog is 100%.
Bootstrap support for D3BUX2 as seed ortholog is 99%.

Group of orthologs #311. Best score 281 bits
Score difference with first non-orthologous sequence - P.knowlesi:281 P.pallidum:281

B3L7V3              	100.00%		D3BBU3              	100.00%
Bootstrap support for B3L7V3 as seed ortholog is 100%.
Bootstrap support for D3BBU3 as seed ortholog is 100%.

Group of orthologs #312. Best score 281 bits
Score difference with first non-orthologous sequence - P.knowlesi:281 P.pallidum:281

B3L8Q5              	100.00%		D3BKY4              	100.00%
Bootstrap support for B3L8Q5 as seed ortholog is 100%.
Bootstrap support for D3BKY4 as seed ortholog is 100%.

Group of orthologs #313. Best score 280 bits
Score difference with first non-orthologous sequence - P.knowlesi:280 P.pallidum:280

B3L0S1              	100.00%		D3BQ29              	100.00%
Bootstrap support for B3L0S1 as seed ortholog is 100%.
Bootstrap support for D3BQ29 as seed ortholog is 100%.

Group of orthologs #314. Best score 279 bits
Score difference with first non-orthologous sequence - P.knowlesi:279 P.pallidum:145

B3L6A1              	100.00%		D3BAI4              	100.00%
Bootstrap support for B3L6A1 as seed ortholog is 100%.
Bootstrap support for D3BAI4 as seed ortholog is 99%.

Group of orthologs #315. Best score 278 bits
Score difference with first non-orthologous sequence - P.knowlesi:278 P.pallidum:278

B3L3M9              	100.00%		D3B2J9              	100.00%
Bootstrap support for B3L3M9 as seed ortholog is 100%.
Bootstrap support for D3B2J9 as seed ortholog is 100%.

Group of orthologs #316. Best score 278 bits
Score difference with first non-orthologous sequence - P.knowlesi:194 P.pallidum:162

B3L4B2              	100.00%		D3B725              	100.00%
Bootstrap support for B3L4B2 as seed ortholog is 100%.
Bootstrap support for D3B725 as seed ortholog is 99%.

Group of orthologs #317. Best score 277 bits
Score difference with first non-orthologous sequence - P.knowlesi:277 P.pallidum:277

B3L067              	100.00%		D3AXY2              	100.00%
Bootstrap support for B3L067 as seed ortholog is 100%.
Bootstrap support for D3AXY2 as seed ortholog is 100%.

Group of orthologs #318. Best score 277 bits
Score difference with first non-orthologous sequence - P.knowlesi:163 P.pallidum:55

B3LCI0              	100.00%		D3B8P9              	100.00%
Bootstrap support for B3LCI0 as seed ortholog is 99%.
Bootstrap support for D3B8P9 as seed ortholog is 91%.

Group of orthologs #319. Best score 277 bits
Score difference with first non-orthologous sequence - P.knowlesi:277 P.pallidum:277

B3LAE0              	100.00%		D3BER0              	100.00%
Bootstrap support for B3LAE0 as seed ortholog is 100%.
Bootstrap support for D3BER0 as seed ortholog is 100%.

Group of orthologs #320. Best score 275 bits
Score difference with first non-orthologous sequence - P.knowlesi:159 P.pallidum:275

B3L8V3              	100.00%		D3B0N9              	100.00%
Bootstrap support for B3L8V3 as seed ortholog is 100%.
Bootstrap support for D3B0N9 as seed ortholog is 100%.

Group of orthologs #321. Best score 275 bits
Score difference with first non-orthologous sequence - P.knowlesi:275 P.pallidum:275

B3LB03              	100.00%		D3B3M9              	100.00%
Bootstrap support for B3LB03 as seed ortholog is 100%.
Bootstrap support for D3B3M9 as seed ortholog is 100%.

Group of orthologs #322. Best score 273 bits
Score difference with first non-orthologous sequence - P.knowlesi:273 P.pallidum:273

B3L7Q0              	100.00%		D3B3H4              	100.00%
Bootstrap support for B3L7Q0 as seed ortholog is 100%.
Bootstrap support for D3B3H4 as seed ortholog is 100%.

Group of orthologs #323. Best score 272 bits
Score difference with first non-orthologous sequence - P.knowlesi:272 P.pallidum:272

B3L681              	100.00%		D3BD64              	100.00%
Bootstrap support for B3L681 as seed ortholog is 100%.
Bootstrap support for D3BD64 as seed ortholog is 100%.

Group of orthologs #324. Best score 272 bits
Score difference with first non-orthologous sequence - P.knowlesi:272 P.pallidum:272

B3L7H2              	100.00%		D3BKM5              	100.00%
Bootstrap support for B3L7H2 as seed ortholog is 100%.
Bootstrap support for D3BKM5 as seed ortholog is 100%.

Group of orthologs #325. Best score 271 bits
Score difference with first non-orthologous sequence - P.knowlesi:271 P.pallidum:271

B3LCP7              	100.00%		D3B3T8              	100.00%
Bootstrap support for B3LCP7 as seed ortholog is 100%.
Bootstrap support for D3B3T8 as seed ortholog is 100%.

Group of orthologs #326. Best score 270 bits
Score difference with first non-orthologous sequence - P.knowlesi:270 P.pallidum:270

B3LAJ9              	100.00%		D3BJN3              	100.00%
Bootstrap support for B3LAJ9 as seed ortholog is 100%.
Bootstrap support for D3BJN3 as seed ortholog is 100%.

Group of orthologs #327. Best score 269 bits
Score difference with first non-orthologous sequence - P.knowlesi:269 P.pallidum:269

B3LCT1              	100.00%		D3BMG8              	100.00%
                    	       		D3BMG7              	72.89%
                    	       		D3BMG9              	58.02%
                    	       		D3AZX8              	34.03%
                    	       		D3B5K6              	19.54%
                    	       		D3BGW1              	16.08%
                    	       		D3B826              	15.95%
                    	       		D3B193              	15.22%
                    	       		D3BK48              	14.79%
Bootstrap support for B3LCT1 as seed ortholog is 100%.
Bootstrap support for D3BMG8 as seed ortholog is 100%.

Group of orthologs #328. Best score 269 bits
Score difference with first non-orthologous sequence - P.knowlesi:269 P.pallidum:269

B3L6B4              	100.00%		D3BKE2              	100.00%
                    	       		D3AYR9              	10.30%
                    	       		D3AWU2              	8.55%
Bootstrap support for B3L6B4 as seed ortholog is 100%.
Bootstrap support for D3BKE2 as seed ortholog is 100%.

Group of orthologs #329. Best score 269 bits
Score difference with first non-orthologous sequence - P.knowlesi:104 P.pallidum:108

B3L8F7              	100.00%		D3BQN8              	100.00%
Bootstrap support for B3L8F7 as seed ortholog is 87%.
Bootstrap support for D3BQN8 as seed ortholog is 67%.
Alternative seed ortholog is D3AVW9 (108 bits away from this cluster)

Group of orthologs #330. Best score 269 bits
Score difference with first non-orthologous sequence - P.knowlesi:269 P.pallidum:269

B3L787              	100.00%		D3BSE8              	100.00%
Bootstrap support for B3L787 as seed ortholog is 100%.
Bootstrap support for D3BSE8 as seed ortholog is 100%.

Group of orthologs #331. Best score 268 bits
Score difference with first non-orthologous sequence - P.knowlesi:228 P.pallidum:268

B3KZR0              	100.00%		D3BBN6              	100.00%
Bootstrap support for B3KZR0 as seed ortholog is 100%.
Bootstrap support for D3BBN6 as seed ortholog is 100%.

Group of orthologs #332. Best score 268 bits
Score difference with first non-orthologous sequence - P.knowlesi:268 P.pallidum:268

B3L230              	100.00%		D3BRK4              	100.00%
Bootstrap support for B3L230 as seed ortholog is 100%.
Bootstrap support for D3BRK4 as seed ortholog is 100%.

Group of orthologs #333. Best score 267 bits
Score difference with first non-orthologous sequence - P.knowlesi:267 P.pallidum:267

B3KZD2              	100.00%		D3B6P0              	100.00%
Bootstrap support for B3KZD2 as seed ortholog is 100%.
Bootstrap support for D3B6P0 as seed ortholog is 100%.

Group of orthologs #334. Best score 267 bits
Score difference with first non-orthologous sequence - P.knowlesi:122 P.pallidum:29

B3LCV2              	100.00%		D3BGU2              	100.00%
Bootstrap support for B3LCV2 as seed ortholog is 99%.
Bootstrap support for D3BGU2 as seed ortholog is 82%.

Group of orthologs #335. Best score 267 bits
Score difference with first non-orthologous sequence - P.knowlesi:267 P.pallidum:267

B3LCR8              	100.00%		D3BSF9              	100.00%
Bootstrap support for B3LCR8 as seed ortholog is 100%.
Bootstrap support for D3BSF9 as seed ortholog is 100%.

Group of orthologs #336. Best score 266 bits
Score difference with first non-orthologous sequence - P.knowlesi:266 P.pallidum:266

B3L7X1              	100.00%		D3B770              	100.00%
Bootstrap support for B3L7X1 as seed ortholog is 100%.
Bootstrap support for D3B770 as seed ortholog is 100%.

Group of orthologs #337. Best score 266 bits
Score difference with first non-orthologous sequence - P.knowlesi:266 P.pallidum:266

B3L5K0              	100.00%		D3BBM4              	100.00%
Bootstrap support for B3L5K0 as seed ortholog is 100%.
Bootstrap support for D3BBM4 as seed ortholog is 100%.

Group of orthologs #338. Best score 265 bits
Score difference with first non-orthologous sequence - P.knowlesi:141 P.pallidum:188

B3L5A2              	100.00%		D3BMN0              	100.00%
Bootstrap support for B3L5A2 as seed ortholog is 99%.
Bootstrap support for D3BMN0 as seed ortholog is 100%.

Group of orthologs #339. Best score 263 bits
Score difference with first non-orthologous sequence - P.knowlesi:178 P.pallidum:167

B3L4Y0              	100.00%		D3B7P1              	100.00%
                    	       		D3BSF4              	17.51%
Bootstrap support for B3L4Y0 as seed ortholog is 100%.
Bootstrap support for D3B7P1 as seed ortholog is 100%.

Group of orthologs #340. Best score 263 bits
Score difference with first non-orthologous sequence - P.knowlesi:263 P.pallidum:263

B3L020              	100.00%		D3B0C3              	100.00%
Bootstrap support for B3L020 as seed ortholog is 100%.
Bootstrap support for D3B0C3 as seed ortholog is 100%.

Group of orthologs #341. Best score 260 bits
Score difference with first non-orthologous sequence - P.knowlesi:260 P.pallidum:260

B3L9P8              	100.00%		D3AYN6              	100.00%
Bootstrap support for B3L9P8 as seed ortholog is 100%.
Bootstrap support for D3AYN6 as seed ortholog is 100%.

Group of orthologs #342. Best score 260 bits
Score difference with first non-orthologous sequence - P.knowlesi:260 P.pallidum:260

B3LCC4              	100.00%		D3B0H6              	100.00%
Bootstrap support for B3LCC4 as seed ortholog is 100%.
Bootstrap support for D3B0H6 as seed ortholog is 100%.

Group of orthologs #343. Best score 260 bits
Score difference with first non-orthologous sequence - P.knowlesi:260 P.pallidum:260

B3LD49              	100.00%		D3B1Z3              	100.00%
Bootstrap support for B3LD49 as seed ortholog is 100%.
Bootstrap support for D3B1Z3 as seed ortholog is 100%.

Group of orthologs #344. Best score 260 bits
Score difference with first non-orthologous sequence - P.knowlesi:260 P.pallidum:260

B3LCV0              	100.00%		D3BFF5              	100.00%
Bootstrap support for B3LCV0 as seed ortholog is 100%.
Bootstrap support for D3BFF5 as seed ortholog is 100%.

Group of orthologs #345. Best score 260 bits
Score difference with first non-orthologous sequence - P.knowlesi:260 P.pallidum:184

B3LAK2              	100.00%		D3BI40              	100.00%
Bootstrap support for B3LAK2 as seed ortholog is 100%.
Bootstrap support for D3BI40 as seed ortholog is 100%.

Group of orthologs #346. Best score 260 bits
Score difference with first non-orthologous sequence - P.knowlesi:260 P.pallidum:147

B3LC53              	100.00%		D3BTG9              	100.00%
Bootstrap support for B3LC53 as seed ortholog is 100%.
Bootstrap support for D3BTG9 as seed ortholog is 99%.

Group of orthologs #347. Best score 257 bits
Score difference with first non-orthologous sequence - P.knowlesi:109 P.pallidum:104

B3LBF2              	100.00%		D3BBP5              	100.00%
Bootstrap support for B3LBF2 as seed ortholog is 100%.
Bootstrap support for D3BBP5 as seed ortholog is 100%.

Group of orthologs #348. Best score 256 bits
Score difference with first non-orthologous sequence - P.knowlesi:256 P.pallidum:256

B3LA05              	100.00%		D3BAC7              	100.00%
Bootstrap support for B3LA05 as seed ortholog is 100%.
Bootstrap support for D3BAC7 as seed ortholog is 100%.

Group of orthologs #349. Best score 255 bits
Score difference with first non-orthologous sequence - P.knowlesi:255 P.pallidum:142

B3L2K3              	100.00%		D3BEY5              	100.00%
                    	       		D3BIJ9              	8.17%
Bootstrap support for B3L2K3 as seed ortholog is 100%.
Bootstrap support for D3BEY5 as seed ortholog is 99%.

Group of orthologs #350. Best score 255 bits
Score difference with first non-orthologous sequence - P.knowlesi:47 P.pallidum:40

B3L1K2              	100.00%		D3BDH0              	100.00%
Bootstrap support for B3L1K2 as seed ortholog is 90%.
Bootstrap support for D3BDH0 as seed ortholog is 81%.

Group of orthologs #351. Best score 254 bits
Score difference with first non-orthologous sequence - P.knowlesi:136 P.pallidum:88

B3L024              	100.00%		D3BEC0              	100.00%
Bootstrap support for B3L024 as seed ortholog is 99%.
Bootstrap support for D3BEC0 as seed ortholog is 99%.

Group of orthologs #352. Best score 253 bits
Score difference with first non-orthologous sequence - P.knowlesi:253 P.pallidum:253

B3L0B0              	100.00%		D3AX31              	100.00%
Bootstrap support for B3L0B0 as seed ortholog is 100%.
Bootstrap support for D3AX31 as seed ortholog is 100%.

Group of orthologs #353. Best score 252 bits
Score difference with first non-orthologous sequence - P.knowlesi:87 P.pallidum:252

B3LAT1              	100.00%		D3B7J9              	100.00%
Bootstrap support for B3LAT1 as seed ortholog is 99%.
Bootstrap support for D3B7J9 as seed ortholog is 100%.

Group of orthologs #354. Best score 251 bits
Score difference with first non-orthologous sequence - P.knowlesi:251 P.pallidum:251

B3KZR6              	100.00%		D3AZF5              	100.00%
Bootstrap support for B3KZR6 as seed ortholog is 100%.
Bootstrap support for D3AZF5 as seed ortholog is 100%.

Group of orthologs #355. Best score 251 bits
Score difference with first non-orthologous sequence - P.knowlesi:251 P.pallidum:163

B3L3E0              	100.00%		D3BQZ8              	100.00%
Bootstrap support for B3L3E0 as seed ortholog is 100%.
Bootstrap support for D3BQZ8 as seed ortholog is 99%.

Group of orthologs #356. Best score 250 bits
Score difference with first non-orthologous sequence - P.knowlesi:250 P.pallidum:157

B3L5A0              	100.00%		D3B5T9              	100.00%
Bootstrap support for B3L5A0 as seed ortholog is 100%.
Bootstrap support for D3B5T9 as seed ortholog is 100%.

Group of orthologs #357. Best score 249 bits
Score difference with first non-orthologous sequence - P.knowlesi:249 P.pallidum:249

B3L640              	100.00%		D3B4H2              	100.00%
Bootstrap support for B3L640 as seed ortholog is 100%.
Bootstrap support for D3B4H2 as seed ortholog is 100%.

Group of orthologs #358. Best score 249 bits
Score difference with first non-orthologous sequence - P.knowlesi:249 P.pallidum:249

B3L3Y9              	100.00%		D3BK06              	100.00%
Bootstrap support for B3L3Y9 as seed ortholog is 100%.
Bootstrap support for D3BK06 as seed ortholog is 100%.

Group of orthologs #359. Best score 248 bits
Score difference with first non-orthologous sequence - P.knowlesi:92 P.pallidum:55

B3L120              	100.00%		D3B5X2              	100.00%
Bootstrap support for B3L120 as seed ortholog is 99%.
Bootstrap support for D3B5X2 as seed ortholog is 99%.

Group of orthologs #360. Best score 248 bits
Score difference with first non-orthologous sequence - P.knowlesi:248 P.pallidum:125

B3KZF5              	100.00%		D3B972              	100.00%
Bootstrap support for B3KZF5 as seed ortholog is 100%.
Bootstrap support for D3B972 as seed ortholog is 99%.

Group of orthologs #361. Best score 248 bits
Score difference with first non-orthologous sequence - P.knowlesi:99 P.pallidum:87

B3LB25              	100.00%		D3BGI7              	100.00%
Bootstrap support for B3LB25 as seed ortholog is 100%.
Bootstrap support for D3BGI7 as seed ortholog is 99%.

Group of orthologs #362. Best score 248 bits
Score difference with first non-orthologous sequence - P.knowlesi:248 P.pallidum:248

B3L7N3              	100.00%		D3BUF5              	100.00%
Bootstrap support for B3L7N3 as seed ortholog is 100%.
Bootstrap support for D3BUF5 as seed ortholog is 100%.

Group of orthologs #363. Best score 247 bits
Score difference with first non-orthologous sequence - P.knowlesi:247 P.pallidum:247

B3L9E8              	100.00%		D3BIF4              	100.00%
Bootstrap support for B3L9E8 as seed ortholog is 100%.
Bootstrap support for D3BIF4 as seed ortholog is 100%.

Group of orthologs #364. Best score 247 bits
Score difference with first non-orthologous sequence - P.knowlesi:78 P.pallidum:247

B3L8Y4              	100.00%		D3BTS5              	100.00%
Bootstrap support for B3L8Y4 as seed ortholog is 99%.
Bootstrap support for D3BTS5 as seed ortholog is 100%.

Group of orthologs #365. Best score 246 bits
Score difference with first non-orthologous sequence - P.knowlesi:22 P.pallidum:58

B3KZG3              	100.00%		D3BDQ8              	100.00%
                    	       		D3B313              	8.60%
Bootstrap support for B3KZG3 as seed ortholog is 89%.
Bootstrap support for D3BDQ8 as seed ortholog is 95%.

Group of orthologs #366. Best score 246 bits
Score difference with first non-orthologous sequence - P.knowlesi:246 P.pallidum:131

B3L623              	100.00%		D3B7N8              	100.00%
Bootstrap support for B3L623 as seed ortholog is 100%.
Bootstrap support for D3B7N8 as seed ortholog is 99%.

Group of orthologs #367. Best score 246 bits
Score difference with first non-orthologous sequence - P.knowlesi:246 P.pallidum:246

B3LCC3              	100.00%		D3BGC0              	100.00%
Bootstrap support for B3LCC3 as seed ortholog is 100%.
Bootstrap support for D3BGC0 as seed ortholog is 100%.

Group of orthologs #368. Best score 245 bits
Score difference with first non-orthologous sequence - P.knowlesi:245 P.pallidum:245

B3L2T6              	100.00%		D3B5K0              	100.00%
Bootstrap support for B3L2T6 as seed ortholog is 100%.
Bootstrap support for D3B5K0 as seed ortholog is 100%.

Group of orthologs #369. Best score 244 bits
Score difference with first non-orthologous sequence - P.knowlesi:33 P.pallidum:15

B3L6D9              	100.00%		D3BLV3              	100.00%
                    	       		D3BP55              	27.65%
                    	       		D3BN54              	14.71%
Bootstrap support for B3L6D9 as seed ortholog is 91%.
Bootstrap support for D3BLV3 as seed ortholog is 73%.
Alternative seed ortholog is D3BL86 (15 bits away from this cluster)

Group of orthologs #370. Best score 244 bits
Score difference with first non-orthologous sequence - P.knowlesi:244 P.pallidum:244

B3LA03              	100.00%		D3AXH6              	100.00%
Bootstrap support for B3LA03 as seed ortholog is 100%.
Bootstrap support for D3AXH6 as seed ortholog is 100%.

Group of orthologs #371. Best score 244 bits
Score difference with first non-orthologous sequence - P.knowlesi:244 P.pallidum:244

B3L367              	100.00%		D3B5S9              	100.00%
Bootstrap support for B3L367 as seed ortholog is 100%.
Bootstrap support for D3B5S9 as seed ortholog is 100%.

Group of orthologs #372. Best score 244 bits
Score difference with first non-orthologous sequence - P.knowlesi:244 P.pallidum:244

B3L4N0              	100.00%		D3BB01              	100.00%
Bootstrap support for B3L4N0 as seed ortholog is 100%.
Bootstrap support for D3BB01 as seed ortholog is 100%.

Group of orthologs #373. Best score 243 bits
Score difference with first non-orthologous sequence - P.knowlesi:243 P.pallidum:243

B3L9A7              	100.00%		D3BDR3              	100.00%
                    	       		D3BME1              	14.26%
Bootstrap support for B3L9A7 as seed ortholog is 100%.
Bootstrap support for D3BDR3 as seed ortholog is 100%.

Group of orthologs #374. Best score 243 bits
Score difference with first non-orthologous sequence - P.knowlesi:243 P.pallidum:243

B3LD25              	100.00%		D3B2S4              	100.00%
Bootstrap support for B3LD25 as seed ortholog is 100%.
Bootstrap support for D3B2S4 as seed ortholog is 100%.

Group of orthologs #375. Best score 243 bits
Score difference with first non-orthologous sequence - P.knowlesi:243 P.pallidum:243

B3L7E0              	100.00%		D3BQU0              	100.00%
Bootstrap support for B3L7E0 as seed ortholog is 100%.
Bootstrap support for D3BQU0 as seed ortholog is 100%.

Group of orthologs #376. Best score 242 bits
Score difference with first non-orthologous sequence - P.knowlesi:242 P.pallidum:144

B3L3I0              	100.00%		D3B9T8              	100.00%
Bootstrap support for B3L3I0 as seed ortholog is 100%.
Bootstrap support for D3B9T8 as seed ortholog is 99%.

Group of orthologs #377. Best score 242 bits
Score difference with first non-orthologous sequence - P.knowlesi:242 P.pallidum:130

B3LAS6              	100.00%		D3BAF6              	100.00%
Bootstrap support for B3LAS6 as seed ortholog is 100%.
Bootstrap support for D3BAF6 as seed ortholog is 99%.

Group of orthologs #378. Best score 240 bits
Score difference with first non-orthologous sequence - P.knowlesi:61 P.pallidum:110

B3LC58              	100.00%		D3BD39              	100.00%
                    	       		D3BD41              	79.89%
Bootstrap support for B3LC58 as seed ortholog is 98%.
Bootstrap support for D3BD39 as seed ortholog is 99%.

Group of orthologs #379. Best score 240 bits
Score difference with first non-orthologous sequence - P.knowlesi:240 P.pallidum:240

B3L0H3              	100.00%		D3B3W9              	100.00%
Bootstrap support for B3L0H3 as seed ortholog is 100%.
Bootstrap support for D3B3W9 as seed ortholog is 100%.

Group of orthologs #380. Best score 240 bits
Score difference with first non-orthologous sequence - P.knowlesi:61 P.pallidum:14

B3LC19              	100.00%		D3B0H3              	100.00%
Bootstrap support for B3LC19 as seed ortholog is 99%.
Bootstrap support for D3B0H3 as seed ortholog is 66%.
Alternative seed ortholog is D3AWN3 (14 bits away from this cluster)

Group of orthologs #381. Best score 240 bits
Score difference with first non-orthologous sequence - P.knowlesi:240 P.pallidum:240

B3L786              	100.00%		D3BM08              	100.00%
Bootstrap support for B3L786 as seed ortholog is 100%.
Bootstrap support for D3BM08 as seed ortholog is 100%.

Group of orthologs #382. Best score 240 bits
Score difference with first non-orthologous sequence - P.knowlesi:240 P.pallidum:240

B3LAV2              	100.00%		D3BN75              	100.00%
Bootstrap support for B3LAV2 as seed ortholog is 100%.
Bootstrap support for D3BN75 as seed ortholog is 100%.

Group of orthologs #383. Best score 239 bits
Score difference with first non-orthologous sequence - P.knowlesi:239 P.pallidum:239

B3KZ30              	100.00%		D3AY50              	100.00%
Bootstrap support for B3KZ30 as seed ortholog is 100%.
Bootstrap support for D3AY50 as seed ortholog is 100%.

Group of orthologs #384. Best score 239 bits
Score difference with first non-orthologous sequence - P.knowlesi:239 P.pallidum:239

B3KZA8              	100.00%		D3BL94              	100.00%
Bootstrap support for B3KZA8 as seed ortholog is 100%.
Bootstrap support for D3BL94 as seed ortholog is 100%.

Group of orthologs #385. Best score 238 bits
Score difference with first non-orthologous sequence - P.knowlesi:59 P.pallidum:89

B3LD60              	100.00%		D3B9E0              	100.00%
Bootstrap support for B3LD60 as seed ortholog is 83%.
Bootstrap support for D3B9E0 as seed ortholog is 99%.

Group of orthologs #386. Best score 238 bits
Score difference with first non-orthologous sequence - P.knowlesi:238 P.pallidum:238

B3L086              	100.00%		D3BTV2              	100.00%
Bootstrap support for B3L086 as seed ortholog is 100%.
Bootstrap support for D3BTV2 as seed ortholog is 100%.

Group of orthologs #387. Best score 237 bits
Score difference with first non-orthologous sequence - P.knowlesi:237 P.pallidum:237

B3KZY1              	100.00%		D3BJC8              	100.00%
Bootstrap support for B3KZY1 as seed ortholog is 100%.
Bootstrap support for D3BJC8 as seed ortholog is 100%.

Group of orthologs #388. Best score 237 bits
Score difference with first non-orthologous sequence - P.knowlesi:237 P.pallidum:237

B3LCV6              	100.00%		D3B6T4              	100.00%
Bootstrap support for B3LCV6 as seed ortholog is 100%.
Bootstrap support for D3B6T4 as seed ortholog is 100%.

Group of orthologs #389. Best score 237 bits
Score difference with first non-orthologous sequence - P.knowlesi:237 P.pallidum:237

B3LA43              	100.00%		D3BHC9              	100.00%
Bootstrap support for B3LA43 as seed ortholog is 100%.
Bootstrap support for D3BHC9 as seed ortholog is 100%.

Group of orthologs #390. Best score 237 bits
Score difference with first non-orthologous sequence - P.knowlesi:237 P.pallidum:237

B3L3R6              	100.00%		D3BSA3              	100.00%
Bootstrap support for B3L3R6 as seed ortholog is 100%.
Bootstrap support for D3BSA3 as seed ortholog is 100%.

Group of orthologs #391. Best score 236 bits
Score difference with first non-orthologous sequence - P.knowlesi:236 P.pallidum:236

B3LAR7              	100.00%		D3B5U9              	100.00%
Bootstrap support for B3LAR7 as seed ortholog is 100%.
Bootstrap support for D3B5U9 as seed ortholog is 100%.

Group of orthologs #392. Best score 236 bits
Score difference with first non-orthologous sequence - P.knowlesi:236 P.pallidum:236

B3LCG3              	100.00%		D3B6L9              	100.00%
Bootstrap support for B3LCG3 as seed ortholog is 100%.
Bootstrap support for D3B6L9 as seed ortholog is 100%.

Group of orthologs #393. Best score 236 bits
Score difference with first non-orthologous sequence - P.knowlesi:236 P.pallidum:236

B3LBS0              	100.00%		D3B8D7              	100.00%
Bootstrap support for B3LBS0 as seed ortholog is 100%.
Bootstrap support for D3B8D7 as seed ortholog is 100%.

Group of orthologs #394. Best score 236 bits
Score difference with first non-orthologous sequence - P.knowlesi:236 P.pallidum:236

B3L752              	100.00%		D3BU50              	100.00%
Bootstrap support for B3L752 as seed ortholog is 100%.
Bootstrap support for D3BU50 as seed ortholog is 100%.

Group of orthologs #395. Best score 235 bits
Score difference with first non-orthologous sequence - P.knowlesi:186 P.pallidum:235

B3LAB0              	100.00%		D3B264              	100.00%
Bootstrap support for B3LAB0 as seed ortholog is 100%.
Bootstrap support for D3B264 as seed ortholog is 100%.

Group of orthologs #396. Best score 235 bits
Score difference with first non-orthologous sequence - P.knowlesi:235 P.pallidum:235

B3LD63              	100.00%		D3BE34              	100.00%
Bootstrap support for B3LD63 as seed ortholog is 100%.
Bootstrap support for D3BE34 as seed ortholog is 100%.

Group of orthologs #397. Best score 234 bits
Score difference with first non-orthologous sequence - P.knowlesi:184 P.pallidum:234

B3L3Q4              	100.00%		D3B6G7              	100.00%
Bootstrap support for B3L3Q4 as seed ortholog is 100%.
Bootstrap support for D3B6G7 as seed ortholog is 100%.

Group of orthologs #398. Best score 234 bits
Score difference with first non-orthologous sequence - P.knowlesi:234 P.pallidum:234

B3L826              	100.00%		D3BCN3              	100.00%
Bootstrap support for B3L826 as seed ortholog is 100%.
Bootstrap support for D3BCN3 as seed ortholog is 100%.

Group of orthologs #399. Best score 233 bits
Score difference with first non-orthologous sequence - P.knowlesi:233 P.pallidum:233

B3L665              	100.00%		D3BMH8              	100.00%
Bootstrap support for B3L665 as seed ortholog is 100%.
Bootstrap support for D3BMH8 as seed ortholog is 100%.

Group of orthologs #400. Best score 232 bits
Score difference with first non-orthologous sequence - P.knowlesi:232 P.pallidum:232

B3L566              	100.00%		D3B298              	100.00%
Bootstrap support for B3L566 as seed ortholog is 100%.
Bootstrap support for D3B298 as seed ortholog is 100%.

Group of orthologs #401. Best score 232 bits
Score difference with first non-orthologous sequence - P.knowlesi:146 P.pallidum:147

B3L6U8              	100.00%		D3B3S8              	100.00%
Bootstrap support for B3L6U8 as seed ortholog is 100%.
Bootstrap support for D3B3S8 as seed ortholog is 100%.

Group of orthologs #402. Best score 232 bits
Score difference with first non-orthologous sequence - P.knowlesi:232 P.pallidum:232

B3L714              	100.00%		D3BQU1              	100.00%
Bootstrap support for B3L714 as seed ortholog is 100%.
Bootstrap support for D3BQU1 as seed ortholog is 100%.

Group of orthologs #403. Best score 232 bits
Score difference with first non-orthologous sequence - P.knowlesi:232 P.pallidum:137

B3LAY5              	100.00%		D3BQJ7              	100.00%
Bootstrap support for B3LAY5 as seed ortholog is 100%.
Bootstrap support for D3BQJ7 as seed ortholog is 99%.

Group of orthologs #404. Best score 231 bits
Score difference with first non-orthologous sequence - P.knowlesi:231 P.pallidum:231

B3L0A6              	100.00%		D3AYQ3              	100.00%
Bootstrap support for B3L0A6 as seed ortholog is 100%.
Bootstrap support for D3AYQ3 as seed ortholog is 100%.

Group of orthologs #405. Best score 231 bits
Score difference with first non-orthologous sequence - P.knowlesi:61 P.pallidum:14

B3L472              	100.00%		D3B1S9              	100.00%
Bootstrap support for B3L472 as seed ortholog is 93%.
Bootstrap support for D3B1S9 as seed ortholog is 61%.
Alternative seed ortholog is D3B2B1 (14 bits away from this cluster)

Group of orthologs #406. Best score 230 bits
Score difference with first non-orthologous sequence - P.knowlesi:230 P.pallidum:117

B3L1I5              	100.00%		D3BAC1              	100.00%
Bootstrap support for B3L1I5 as seed ortholog is 100%.
Bootstrap support for D3BAC1 as seed ortholog is 99%.

Group of orthologs #407. Best score 230 bits
Score difference with first non-orthologous sequence - P.knowlesi:230 P.pallidum:230

B3L0S2              	100.00%		D3BPB4              	100.00%
Bootstrap support for B3L0S2 as seed ortholog is 100%.
Bootstrap support for D3BPB4 as seed ortholog is 100%.

Group of orthologs #408. Best score 230 bits
Score difference with first non-orthologous sequence - P.knowlesi:65 P.pallidum:33

B3L3Y1              	100.00%		D3BQE6              	100.00%
Bootstrap support for B3L3Y1 as seed ortholog is 99%.
Bootstrap support for D3BQE6 as seed ortholog is 91%.

Group of orthologs #409. Best score 229 bits
Score difference with first non-orthologous sequence - P.knowlesi:229 P.pallidum:229

B3L0U1              	100.00%		D3AVU4              	100.00%
Bootstrap support for B3L0U1 as seed ortholog is 100%.
Bootstrap support for D3AVU4 as seed ortholog is 100%.

Group of orthologs #410. Best score 228 bits
Score difference with first non-orthologous sequence - P.knowlesi:127 P.pallidum:55

B3L3M8              	100.00%		D3AY59              	100.00%
Bootstrap support for B3L3M8 as seed ortholog is 99%.
Bootstrap support for D3AY59 as seed ortholog is 98%.

Group of orthologs #411. Best score 228 bits
Score difference with first non-orthologous sequence - P.knowlesi:228 P.pallidum:139

B3L5R4              	100.00%		D3B3C8              	100.00%
Bootstrap support for B3L5R4 as seed ortholog is 100%.
Bootstrap support for D3B3C8 as seed ortholog is 94%.

Group of orthologs #412. Best score 228 bits
Score difference with first non-orthologous sequence - P.knowlesi:228 P.pallidum:228

B3L4Z6              	100.00%		D3BJ52              	100.00%
Bootstrap support for B3L4Z6 as seed ortholog is 100%.
Bootstrap support for D3BJ52 as seed ortholog is 100%.

Group of orthologs #413. Best score 228 bits
Score difference with first non-orthologous sequence - P.knowlesi:228 P.pallidum:228

B3LCL9              	100.00%		D3BUZ2              	100.00%
Bootstrap support for B3LCL9 as seed ortholog is 100%.
Bootstrap support for D3BUZ2 as seed ortholog is 100%.

Group of orthologs #414. Best score 227 bits
Score difference with first non-orthologous sequence - P.knowlesi:227 P.pallidum:227

B3L1T3              	100.00%		D3B206              	100.00%
Bootstrap support for B3L1T3 as seed ortholog is 100%.
Bootstrap support for D3B206 as seed ortholog is 100%.

Group of orthologs #415. Best score 227 bits
Score difference with first non-orthologous sequence - P.knowlesi:227 P.pallidum:227

B3L3X8              	100.00%		D3B130              	100.00%
Bootstrap support for B3L3X8 as seed ortholog is 100%.
Bootstrap support for D3B130 as seed ortholog is 100%.

Group of orthologs #416. Best score 227 bits
Score difference with first non-orthologous sequence - P.knowlesi:227 P.pallidum:227

B3L9D4              	100.00%		D3BR69              	100.00%
Bootstrap support for B3L9D4 as seed ortholog is 100%.
Bootstrap support for D3BR69 as seed ortholog is 100%.

Group of orthologs #417. Best score 227 bits
Score difference with first non-orthologous sequence - P.knowlesi:227 P.pallidum:227

B3LBD4              	100.00%		D3BPW9              	100.00%
Bootstrap support for B3LBD4 as seed ortholog is 100%.
Bootstrap support for D3BPW9 as seed ortholog is 100%.

Group of orthologs #418. Best score 226 bits
Score difference with first non-orthologous sequence - P.knowlesi:226 P.pallidum:226

B3L4K6              	100.00%		D3BCZ8              	100.00%
Bootstrap support for B3L4K6 as seed ortholog is 100%.
Bootstrap support for D3BCZ8 as seed ortholog is 100%.

Group of orthologs #419. Best score 225 bits
Score difference with first non-orthologous sequence - P.knowlesi:42 P.pallidum:47

B3LC83              	100.00%		D3B0N1              	100.00%
Bootstrap support for B3LC83 as seed ortholog is 98%.
Bootstrap support for D3B0N1 as seed ortholog is 99%.

Group of orthologs #420. Best score 224 bits
Score difference with first non-orthologous sequence - P.knowlesi:224 P.pallidum:224

B3L5N8              	100.00%		D3B3A4              	100.00%
Bootstrap support for B3L5N8 as seed ortholog is 100%.
Bootstrap support for D3B3A4 as seed ortholog is 100%.

Group of orthologs #421. Best score 222 bits
Score difference with first non-orthologous sequence - P.knowlesi:222 P.pallidum:222

B3L9P9              	100.00%		D3BI16              	100.00%
                    	       		D3BS67              	24.74%
Bootstrap support for B3L9P9 as seed ortholog is 100%.
Bootstrap support for D3BI16 as seed ortholog is 100%.

Group of orthologs #422. Best score 222 bits
Score difference with first non-orthologous sequence - P.knowlesi:222 P.pallidum:222

B3LB97              	100.00%		D3B2U9              	100.00%
Bootstrap support for B3LB97 as seed ortholog is 100%.
Bootstrap support for D3B2U9 as seed ortholog is 100%.

Group of orthologs #423. Best score 222 bits
Score difference with first non-orthologous sequence - P.knowlesi:222 P.pallidum:222

B3L3W7              	100.00%		D3BEH6              	100.00%
Bootstrap support for B3L3W7 as seed ortholog is 100%.
Bootstrap support for D3BEH6 as seed ortholog is 100%.

Group of orthologs #424. Best score 222 bits
Score difference with first non-orthologous sequence - P.knowlesi:222 P.pallidum:222

B3L1J9              	100.00%		D3BKA5              	100.00%
Bootstrap support for B3L1J9 as seed ortholog is 100%.
Bootstrap support for D3BKA5 as seed ortholog is 100%.

Group of orthologs #425. Best score 222 bits
Score difference with first non-orthologous sequence - P.knowlesi:35 P.pallidum:222

B3L535              	100.00%		D3BJM0              	100.00%
Bootstrap support for B3L535 as seed ortholog is 84%.
Bootstrap support for D3BJM0 as seed ortholog is 100%.

Group of orthologs #426. Best score 220 bits
Score difference with first non-orthologous sequence - P.knowlesi:99 P.pallidum:135

B3L111              	100.00%		D3BPL3              	100.00%
                    	       		D3BP03              	52.06%
Bootstrap support for B3L111 as seed ortholog is 98%.
Bootstrap support for D3BPL3 as seed ortholog is 99%.

Group of orthologs #427. Best score 220 bits
Score difference with first non-orthologous sequence - P.knowlesi:220 P.pallidum:220

B3L7Q9              	100.00%		D3BBQ8              	100.00%
Bootstrap support for B3L7Q9 as seed ortholog is 100%.
Bootstrap support for D3BBQ8 as seed ortholog is 100%.

Group of orthologs #428. Best score 220 bits
Score difference with first non-orthologous sequence - P.knowlesi:102 P.pallidum:107

B3L4G3              	100.00%		D3BM03              	100.00%
Bootstrap support for B3L4G3 as seed ortholog is 99%.
Bootstrap support for D3BM03 as seed ortholog is 99%.

Group of orthologs #429. Best score 219 bits
Score difference with first non-orthologous sequence - P.knowlesi:219 P.pallidum:219

B3L8K9              	100.00%		D3BFU2              	100.00%
Bootstrap support for B3L8K9 as seed ortholog is 100%.
Bootstrap support for D3BFU2 as seed ortholog is 100%.

Group of orthologs #430. Best score 218 bits
Score difference with first non-orthologous sequence - P.knowlesi:127 P.pallidum:55

B3LAR8              	100.00%		D3B233              	100.00%
B3L728              	18.33%		
Bootstrap support for B3LAR8 as seed ortholog is 100%.
Bootstrap support for D3B233 as seed ortholog is 70%.
Alternative seed ortholog is D3BMB7 (55 bits away from this cluster)

Group of orthologs #431. Best score 218 bits
Score difference with first non-orthologous sequence - P.knowlesi:218 P.pallidum:218

B3L9V6              	100.00%		D3B0J5              	100.00%
Bootstrap support for B3L9V6 as seed ortholog is 100%.
Bootstrap support for D3B0J5 as seed ortholog is 100%.

Group of orthologs #432. Best score 218 bits
Score difference with first non-orthologous sequence - P.knowlesi:218 P.pallidum:218

B3L6A6              	100.00%		D3B615              	100.00%
Bootstrap support for B3L6A6 as seed ortholog is 100%.
Bootstrap support for D3B615 as seed ortholog is 100%.

Group of orthologs #433. Best score 218 bits
Score difference with first non-orthologous sequence - P.knowlesi:218 P.pallidum:136

B3L3I6              	100.00%		D3BAT4              	100.00%
Bootstrap support for B3L3I6 as seed ortholog is 100%.
Bootstrap support for D3BAT4 as seed ortholog is 99%.

Group of orthologs #434. Best score 218 bits
Score difference with first non-orthologous sequence - P.knowlesi:218 P.pallidum:218

B3L9A1              	100.00%		D3BBF0              	100.00%
Bootstrap support for B3L9A1 as seed ortholog is 100%.
Bootstrap support for D3BBF0 as seed ortholog is 100%.

Group of orthologs #435. Best score 218 bits
Score difference with first non-orthologous sequence - P.knowlesi:218 P.pallidum:218

B3L5F7              	100.00%		D3BTM5              	100.00%
Bootstrap support for B3L5F7 as seed ortholog is 100%.
Bootstrap support for D3BTM5 as seed ortholog is 100%.

Group of orthologs #436. Best score 217 bits
Score difference with first non-orthologous sequence - P.knowlesi:141 P.pallidum:133

B3L2P9              	100.00%		D3B528              	100.00%
Bootstrap support for B3L2P9 as seed ortholog is 99%.
Bootstrap support for D3B528 as seed ortholog is 99%.

Group of orthologs #437. Best score 217 bits
Score difference with first non-orthologous sequence - P.knowlesi:109 P.pallidum:217

B3LC15              	100.00%		D3BTH5              	100.00%
Bootstrap support for B3LC15 as seed ortholog is 99%.
Bootstrap support for D3BTH5 as seed ortholog is 100%.

Group of orthologs #438. Best score 216 bits
Score difference with first non-orthologous sequence - P.knowlesi:216 P.pallidum:216

B3L0V6              	100.00%		D3BTH8              	100.00%
                    	       		D3AVJ4              	12.83%
Bootstrap support for B3L0V6 as seed ortholog is 100%.
Bootstrap support for D3BTH8 as seed ortholog is 100%.

Group of orthologs #439. Best score 216 bits
Score difference with first non-orthologous sequence - P.knowlesi:216 P.pallidum:216

B3L3C0              	100.00%		D3BV53              	100.00%
                    	       		D3B280              	11.91%
Bootstrap support for B3L3C0 as seed ortholog is 100%.
Bootstrap support for D3BV53 as seed ortholog is 100%.

Group of orthologs #440. Best score 216 bits
Score difference with first non-orthologous sequence - P.knowlesi:113 P.pallidum:140

B3L789              	100.00%		D3AZ65              	100.00%
Bootstrap support for B3L789 as seed ortholog is 99%.
Bootstrap support for D3AZ65 as seed ortholog is 99%.

Group of orthologs #441. Best score 215 bits
Score difference with first non-orthologous sequence - P.knowlesi:67 P.pallidum:59

B3L4V7              	100.00%		D3AYC5              	100.00%
Bootstrap support for B3L4V7 as seed ortholog is 99%.
Bootstrap support for D3AYC5 as seed ortholog is 98%.

Group of orthologs #442. Best score 215 bits
Score difference with first non-orthologous sequence - P.knowlesi:215 P.pallidum:215

B3L0B5              	100.00%		D3B8K8              	100.00%
Bootstrap support for B3L0B5 as seed ortholog is 100%.
Bootstrap support for D3B8K8 as seed ortholog is 100%.

Group of orthologs #443. Best score 215 bits
Score difference with first non-orthologous sequence - P.knowlesi:215 P.pallidum:72

B3L1H1              	100.00%		D3BCY7              	100.00%
Bootstrap support for B3L1H1 as seed ortholog is 100%.
Bootstrap support for D3BCY7 as seed ortholog is 84%.

Group of orthologs #444. Best score 215 bits
Score difference with first non-orthologous sequence - P.knowlesi:215 P.pallidum:215

B3L0W6              	100.00%		D3BHV4              	100.00%
Bootstrap support for B3L0W6 as seed ortholog is 100%.
Bootstrap support for D3BHV4 as seed ortholog is 100%.

Group of orthologs #445. Best score 215 bits
Score difference with first non-orthologous sequence - P.knowlesi:215 P.pallidum:215

B3L4C7              	100.00%		D3BV90              	100.00%
Bootstrap support for B3L4C7 as seed ortholog is 100%.
Bootstrap support for D3BV90 as seed ortholog is 100%.

Group of orthologs #446. Best score 214 bits
Score difference with first non-orthologous sequence - P.knowlesi:214 P.pallidum:214

B3L2Z8              	100.00%		D3BEF1              	100.00%
Bootstrap support for B3L2Z8 as seed ortholog is 100%.
Bootstrap support for D3BEF1 as seed ortholog is 100%.

Group of orthologs #447. Best score 214 bits
Score difference with first non-orthologous sequence - P.knowlesi:214 P.pallidum:214

B3L7Y4              	100.00%		D3BN73              	100.00%
Bootstrap support for B3L7Y4 as seed ortholog is 100%.
Bootstrap support for D3BN73 as seed ortholog is 100%.

Group of orthologs #448. Best score 213 bits
Score difference with first non-orthologous sequence - P.knowlesi:72 P.pallidum:149

B3L873              	100.00%		D3B4X1              	100.00%
                    	       		D3AVP3              	14.02%
Bootstrap support for B3L873 as seed ortholog is 95%.
Bootstrap support for D3B4X1 as seed ortholog is 99%.

Group of orthologs #449. Best score 213 bits
Score difference with first non-orthologous sequence - P.knowlesi:109 P.pallidum:213

B3L6W6              	100.00%		D3B0J0              	100.00%
Bootstrap support for B3L6W6 as seed ortholog is 99%.
Bootstrap support for D3B0J0 as seed ortholog is 100%.

Group of orthologs #450. Best score 213 bits
Score difference with first non-orthologous sequence - P.knowlesi:213 P.pallidum:157

B3L3T0              	100.00%		D3B5U0              	100.00%
Bootstrap support for B3L3T0 as seed ortholog is 100%.
Bootstrap support for D3B5U0 as seed ortholog is 99%.

Group of orthologs #451. Best score 213 bits
Score difference with first non-orthologous sequence - P.knowlesi:44 P.pallidum:213

B3L9V4              	100.00%		D3BCH5              	100.00%
Bootstrap support for B3L9V4 as seed ortholog is 92%.
Bootstrap support for D3BCH5 as seed ortholog is 100%.

Group of orthologs #452. Best score 213 bits
Score difference with first non-orthologous sequence - P.knowlesi:213 P.pallidum:213

B3L984              	100.00%		D3BNE3              	100.00%
Bootstrap support for B3L984 as seed ortholog is 100%.
Bootstrap support for D3BNE3 as seed ortholog is 100%.

Group of orthologs #453. Best score 212 bits
Score difference with first non-orthologous sequence - P.knowlesi:87 P.pallidum:58

B3L7M9              	100.00%		D3B633              	100.00%
B3L7V1              	100.00%		D3BUT3              	100.00%
                    	       		D3B6K9              	45.10%
Bootstrap support for B3L7M9 as seed ortholog is 99%.
Bootstrap support for B3L7V1 as seed ortholog is 99%.
Bootstrap support for D3B633 as seed ortholog is 99%.
Bootstrap support for D3BUT3 as seed ortholog is 99%.

Group of orthologs #454. Best score 212 bits
Score difference with first non-orthologous sequence - P.knowlesi:212 P.pallidum:212

B3KZH6              	100.00%		D3BU07              	100.00%
Bootstrap support for B3KZH6 as seed ortholog is 100%.
Bootstrap support for D3BU07 as seed ortholog is 100%.

Group of orthologs #455. Best score 211 bits
Score difference with first non-orthologous sequence - P.knowlesi:211 P.pallidum:211

B3LBW4              	100.00%		D3AXK7              	100.00%
Bootstrap support for B3LBW4 as seed ortholog is 100%.
Bootstrap support for D3AXK7 as seed ortholog is 100%.

Group of orthologs #456. Best score 211 bits
Score difference with first non-orthologous sequence - P.knowlesi:211 P.pallidum:211

B3LAL0              	100.00%		D3B454              	100.00%
Bootstrap support for B3LAL0 as seed ortholog is 100%.
Bootstrap support for D3B454 as seed ortholog is 100%.

Group of orthologs #457. Best score 211 bits
Score difference with first non-orthologous sequence - P.knowlesi:211 P.pallidum:211

B3L7W2              	100.00%		D3BT09              	100.00%
Bootstrap support for B3L7W2 as seed ortholog is 100%.
Bootstrap support for D3BT09 as seed ortholog is 100%.

Group of orthologs #458. Best score 210 bits
Score difference with first non-orthologous sequence - P.knowlesi:210 P.pallidum:210

B3LAC7              	100.00%		D3B1K0              	100.00%
                    	       		D3BC23              	28.69%
                    	       		D3B8P3              	26.61%
                    	       		D3B677              	9.66%
Bootstrap support for B3LAC7 as seed ortholog is 100%.
Bootstrap support for D3B1K0 as seed ortholog is 100%.

Group of orthologs #459. Best score 210 bits
Score difference with first non-orthologous sequence - P.knowlesi:210 P.pallidum:210

B3L7R7              	100.00%		D3B367              	100.00%
Bootstrap support for B3L7R7 as seed ortholog is 100%.
Bootstrap support for D3B367 as seed ortholog is 100%.

Group of orthologs #460. Best score 210 bits
Score difference with first non-orthologous sequence - P.knowlesi:210 P.pallidum:210

B3LD90              	100.00%		D3B6E5              	100.00%
Bootstrap support for B3LD90 as seed ortholog is 100%.
Bootstrap support for D3B6E5 as seed ortholog is 100%.

Group of orthologs #461. Best score 210 bits
Score difference with first non-orthologous sequence - P.knowlesi:210 P.pallidum:210

B3L2R4              	100.00%		D3BLC2              	100.00%
Bootstrap support for B3L2R4 as seed ortholog is 100%.
Bootstrap support for D3BLC2 as seed ortholog is 100%.

Group of orthologs #462. Best score 209 bits
Score difference with first non-orthologous sequence - P.knowlesi:209 P.pallidum:209

B3L2G8              	100.00%		D3BIU0              	100.00%
                    	       		D3BKA7              	13.63%
Bootstrap support for B3L2G8 as seed ortholog is 100%.
Bootstrap support for D3BIU0 as seed ortholog is 100%.

Group of orthologs #463. Best score 209 bits
Score difference with first non-orthologous sequence - P.knowlesi:154 P.pallidum:138

B3L1E6              	100.00%		D3B5L4              	100.00%
Bootstrap support for B3L1E6 as seed ortholog is 99%.
Bootstrap support for D3B5L4 as seed ortholog is 99%.

Group of orthologs #464. Best score 209 bits
Score difference with first non-orthologous sequence - P.knowlesi:69 P.pallidum:53

B3KZK6              	100.00%		D3BBG2              	100.00%
Bootstrap support for B3KZK6 as seed ortholog is 99%.
Bootstrap support for D3BBG2 as seed ortholog is 98%.

Group of orthologs #465. Best score 209 bits
Score difference with first non-orthologous sequence - P.knowlesi:38 P.pallidum:94

B3L7B1              	100.00%		D3BLH2              	100.00%
Bootstrap support for B3L7B1 as seed ortholog is 85%.
Bootstrap support for D3BLH2 as seed ortholog is 99%.

Group of orthologs #466. Best score 208 bits
Score difference with first non-orthologous sequence - P.knowlesi:208 P.pallidum:70

B3L1F7              	100.00%		D3B6R2              	100.00%
Bootstrap support for B3L1F7 as seed ortholog is 100%.
Bootstrap support for D3B6R2 as seed ortholog is 99%.

Group of orthologs #467. Best score 208 bits
Score difference with first non-orthologous sequence - P.knowlesi:129 P.pallidum:118

B3L6W2              	100.00%		D3BHB9              	100.00%
Bootstrap support for B3L6W2 as seed ortholog is 100%.
Bootstrap support for D3BHB9 as seed ortholog is 100%.

Group of orthologs #468. Best score 208 bits
Score difference with first non-orthologous sequence - P.knowlesi:145 P.pallidum:208

B3L4C5              	100.00%		D3BVG5              	100.00%
Bootstrap support for B3L4C5 as seed ortholog is 100%.
Bootstrap support for D3BVG5 as seed ortholog is 100%.

Group of orthologs #469. Best score 207 bits
Score difference with first non-orthologous sequence - P.knowlesi:207 P.pallidum:207

B3L567              	100.00%		D3B1K3              	100.00%
Bootstrap support for B3L567 as seed ortholog is 100%.
Bootstrap support for D3B1K3 as seed ortholog is 100%.

Group of orthologs #470. Best score 207 bits
Score difference with first non-orthologous sequence - P.knowlesi:207 P.pallidum:207

B3L5N9              	100.00%		D3B6S2              	100.00%
Bootstrap support for B3L5N9 as seed ortholog is 100%.
Bootstrap support for D3B6S2 as seed ortholog is 100%.

Group of orthologs #471. Best score 207 bits
Score difference with first non-orthologous sequence - P.knowlesi:207 P.pallidum:207

B3LDF7              	100.00%		D3B210              	100.00%
Bootstrap support for B3LDF7 as seed ortholog is 100%.
Bootstrap support for D3B210 as seed ortholog is 100%.

Group of orthologs #472. Best score 207 bits
Score difference with first non-orthologous sequence - P.knowlesi:207 P.pallidum:126

B3L9J5              	100.00%		D3BCJ1              	100.00%
Bootstrap support for B3L9J5 as seed ortholog is 100%.
Bootstrap support for D3BCJ1 as seed ortholog is 99%.

Group of orthologs #473. Best score 207 bits
Score difference with first non-orthologous sequence - P.knowlesi:96 P.pallidum:133

B3KZZ3              	100.00%		D3BU79              	100.00%
Bootstrap support for B3KZZ3 as seed ortholog is 99%.
Bootstrap support for D3BU79 as seed ortholog is 99%.

Group of orthologs #474. Best score 206 bits
Score difference with first non-orthologous sequence - P.knowlesi:88 P.pallidum:206

B3LA18              	100.00%		D3B782              	100.00%
                    	       		D3AX99              	61.13%
Bootstrap support for B3LA18 as seed ortholog is 99%.
Bootstrap support for D3B782 as seed ortholog is 100%.

Group of orthologs #475. Best score 206 bits
Score difference with first non-orthologous sequence - P.knowlesi:206 P.pallidum:206

B3L5V6              	100.00%		D3B8S5              	100.00%
Bootstrap support for B3L5V6 as seed ortholog is 100%.
Bootstrap support for D3B8S5 as seed ortholog is 100%.

Group of orthologs #476. Best score 205 bits
Score difference with first non-orthologous sequence - P.knowlesi:76 P.pallidum:55

B3KZA2              	100.00%		D3BGH1              	100.00%
Bootstrap support for B3KZA2 as seed ortholog is 99%.
Bootstrap support for D3BGH1 as seed ortholog is 97%.

Group of orthologs #477. Best score 204 bits
Score difference with first non-orthologous sequence - P.knowlesi:204 P.pallidum:204

B3L4S8              	100.00%		D3B6S6              	100.00%
Bootstrap support for B3L4S8 as seed ortholog is 100%.
Bootstrap support for D3B6S6 as seed ortholog is 100%.

Group of orthologs #478. Best score 204 bits
Score difference with first non-orthologous sequence - P.knowlesi:204 P.pallidum:118

B3L163              	100.00%		D3BVR5              	100.00%
Bootstrap support for B3L163 as seed ortholog is 100%.
Bootstrap support for D3BVR5 as seed ortholog is 99%.

Group of orthologs #479. Best score 204 bits
Score difference with first non-orthologous sequence - P.knowlesi:204 P.pallidum:204

B3L7K8              	100.00%		D3BSQ9              	100.00%
Bootstrap support for B3L7K8 as seed ortholog is 100%.
Bootstrap support for D3BSQ9 as seed ortholog is 100%.

Group of orthologs #480. Best score 203 bits
Score difference with first non-orthologous sequence - P.knowlesi:98 P.pallidum:94

B3L2G9              	100.00%		D3B850              	100.00%
                    	       		D3AXD1              	20.00%
Bootstrap support for B3L2G9 as seed ortholog is 99%.
Bootstrap support for D3B850 as seed ortholog is 99%.

Group of orthologs #481. Best score 203 bits
Score difference with first non-orthologous sequence - P.knowlesi:203 P.pallidum:53

B3L3R9              	100.00%		D3B1H3              	100.00%
Bootstrap support for B3L3R9 as seed ortholog is 100%.
Bootstrap support for D3B1H3 as seed ortholog is 89%.

Group of orthologs #482. Best score 203 bits
Score difference with first non-orthologous sequence - P.knowlesi:203 P.pallidum:42

B3L4L9              	100.00%		D3B8R1              	100.00%
Bootstrap support for B3L4L9 as seed ortholog is 100%.
Bootstrap support for D3B8R1 as seed ortholog is 84%.

Group of orthologs #483. Best score 203 bits
Score difference with first non-orthologous sequence - P.knowlesi:203 P.pallidum:203

B3LCU5              	100.00%		D3BG85              	100.00%
Bootstrap support for B3LCU5 as seed ortholog is 100%.
Bootstrap support for D3BG85 as seed ortholog is 100%.

Group of orthologs #484. Best score 203 bits
Score difference with first non-orthologous sequence - P.knowlesi:83 P.pallidum:67

B3L5Z0              	100.00%		D3BR84              	100.00%
Bootstrap support for B3L5Z0 as seed ortholog is 99%.
Bootstrap support for D3BR84 as seed ortholog is 99%.

Group of orthologs #485. Best score 202 bits
Score difference with first non-orthologous sequence - P.knowlesi:202 P.pallidum:202

B3LAU8              	100.00%		D3BVL2              	100.00%
Bootstrap support for B3LAU8 as seed ortholog is 100%.
Bootstrap support for D3BVL2 as seed ortholog is 100%.

Group of orthologs #486. Best score 201 bits
Score difference with first non-orthologous sequence - P.knowlesi:201 P.pallidum:201

B3L0G6              	100.00%		D3AY53              	100.00%
Bootstrap support for B3L0G6 as seed ortholog is 100%.
Bootstrap support for D3AY53 as seed ortholog is 100%.

Group of orthologs #487. Best score 201 bits
Score difference with first non-orthologous sequence - P.knowlesi:67 P.pallidum:30

B3L2J5              	100.00%		D3BNT3              	100.00%
Bootstrap support for B3L2J5 as seed ortholog is 98%.
Bootstrap support for D3BNT3 as seed ortholog is 81%.

Group of orthologs #488. Best score 201 bits
Score difference with first non-orthologous sequence - P.knowlesi:201 P.pallidum:201

B3L8J0              	100.00%		D3BLD1              	100.00%
Bootstrap support for B3L8J0 as seed ortholog is 100%.
Bootstrap support for D3BLD1 as seed ortholog is 100%.

Group of orthologs #489. Best score 201 bits
Score difference with first non-orthologous sequence - P.knowlesi:201 P.pallidum:201

B3L1U4              	100.00%		D3BTZ3              	100.00%
Bootstrap support for B3L1U4 as seed ortholog is 100%.
Bootstrap support for D3BTZ3 as seed ortholog is 100%.

Group of orthologs #490. Best score 201 bits
Score difference with first non-orthologous sequence - P.knowlesi:201 P.pallidum:201

B3L7M5              	100.00%		D3BTU3              	100.00%
Bootstrap support for B3L7M5 as seed ortholog is 100%.
Bootstrap support for D3BTU3 as seed ortholog is 100%.

Group of orthologs #491. Best score 200 bits
Score difference with first non-orthologous sequence - P.knowlesi:200 P.pallidum:113

B3L059              	100.00%		D3BT42              	100.00%
                    	       		D3BT43              	86.25%
Bootstrap support for B3L059 as seed ortholog is 100%.
Bootstrap support for D3BT42 as seed ortholog is 99%.

Group of orthologs #492. Best score 200 bits
Score difference with first non-orthologous sequence - P.knowlesi:200 P.pallidum:200

B3L723              	100.00%		D3BI23              	100.00%
Bootstrap support for B3L723 as seed ortholog is 100%.
Bootstrap support for D3BI23 as seed ortholog is 100%.

Group of orthologs #493. Best score 199 bits
Score difference with first non-orthologous sequence - P.knowlesi:19 P.pallidum:40

B3L0H8              	100.00%		D3BKT2              	100.00%
B3L8L4              	100.00%		D3BN50              	100.00%
B3L068              	33.97%		D3BGZ5              	19.17%
B3L498              	21.03%		
Bootstrap support for B3L0H8 as seed ortholog is 73%.
Alternative seed ortholog is B3LD00 (19 bits away from this cluster)
Bootstrap support for B3L8L4 as seed ortholog is 73%.
Alternative seed ortholog is B3LD00 (19 bits away from this cluster)
Bootstrap support for D3BKT2 as seed ortholog is 86%.
Bootstrap support for D3BN50 as seed ortholog is 69%.
Alternative seed ortholog is D3B5B2 (40 bits away from this cluster)

Group of orthologs #494. Best score 199 bits
Score difference with first non-orthologous sequence - P.knowlesi:199 P.pallidum:199

B3L8I0              	100.00%		D3BCA4              	100.00%
Bootstrap support for B3L8I0 as seed ortholog is 100%.
Bootstrap support for D3BCA4 as seed ortholog is 100%.

Group of orthologs #495. Best score 199 bits
Score difference with first non-orthologous sequence - P.knowlesi:199 P.pallidum:199

B3L580              	100.00%		D3BLE5              	100.00%
Bootstrap support for B3L580 as seed ortholog is 100%.
Bootstrap support for D3BLE5 as seed ortholog is 100%.

Group of orthologs #496. Best score 198 bits
Score difference with first non-orthologous sequence - P.knowlesi:198 P.pallidum:198

B3L119              	100.00%		D3AY97              	100.00%
Bootstrap support for B3L119 as seed ortholog is 100%.
Bootstrap support for D3AY97 as seed ortholog is 100%.

Group of orthologs #497. Best score 198 bits
Score difference with first non-orthologous sequence - P.knowlesi:198 P.pallidum:198

B3L8L2              	100.00%		D3AWV5              	100.00%
Bootstrap support for B3L8L2 as seed ortholog is 100%.
Bootstrap support for D3AWV5 as seed ortholog is 100%.

Group of orthologs #498. Best score 198 bits
Score difference with first non-orthologous sequence - P.knowlesi:95 P.pallidum:72

B3L970              	100.00%		D3BAW0              	100.00%
Bootstrap support for B3L970 as seed ortholog is 98%.
Bootstrap support for D3BAW0 as seed ortholog is 99%.

Group of orthologs #499. Best score 198 bits
Score difference with first non-orthologous sequence - P.knowlesi:198 P.pallidum:198

B3L7Q6              	100.00%		D3BQ33              	100.00%
Bootstrap support for B3L7Q6 as seed ortholog is 100%.
Bootstrap support for D3BQ33 as seed ortholog is 100%.

Group of orthologs #500. Best score 198 bits
Score difference with first non-orthologous sequence - P.knowlesi:198 P.pallidum:198

B3LDC3              	100.00%		D3BNC9              	100.00%
Bootstrap support for B3LDC3 as seed ortholog is 100%.
Bootstrap support for D3BNC9 as seed ortholog is 100%.

Group of orthologs #501. Best score 197 bits
Score difference with first non-orthologous sequence - P.knowlesi:119 P.pallidum:109

B3L2A7              	100.00%		D3BAG5              	100.00%
Bootstrap support for B3L2A7 as seed ortholog is 100%.
Bootstrap support for D3BAG5 as seed ortholog is 100%.

Group of orthologs #502. Best score 197 bits
Score difference with first non-orthologous sequence - P.knowlesi:113 P.pallidum:84

B3L4W6              	100.00%		D3BSG7              	100.00%
Bootstrap support for B3L4W6 as seed ortholog is 100%.
Bootstrap support for D3BSG7 as seed ortholog is 99%.

Group of orthologs #503. Best score 197 bits
Score difference with first non-orthologous sequence - P.knowlesi:197 P.pallidum:197

B3LD01              	100.00%		D3BVI7              	100.00%
Bootstrap support for B3LD01 as seed ortholog is 100%.
Bootstrap support for D3BVI7 as seed ortholog is 100%.

Group of orthologs #504. Best score 196 bits
Score difference with first non-orthologous sequence - P.knowlesi:196 P.pallidum:196

B3LC99              	100.00%		D3BHJ6              	100.00%
                    	       		D3B6I7              	18.47%
Bootstrap support for B3LC99 as seed ortholog is 100%.
Bootstrap support for D3BHJ6 as seed ortholog is 100%.

Group of orthologs #505. Best score 196 bits
Score difference with first non-orthologous sequence - P.knowlesi:196 P.pallidum:134

B3L2F7              	100.00%		D3AYA9              	100.00%
Bootstrap support for B3L2F7 as seed ortholog is 100%.
Bootstrap support for D3AYA9 as seed ortholog is 99%.

Group of orthologs #506. Best score 196 bits
Score difference with first non-orthologous sequence - P.knowlesi:196 P.pallidum:121

B3L8I3              	100.00%		D3BM61              	100.00%
Bootstrap support for B3L8I3 as seed ortholog is 100%.
Bootstrap support for D3BM61 as seed ortholog is 99%.

Group of orthologs #507. Best score 195 bits
Score difference with first non-orthologous sequence - P.knowlesi:195 P.pallidum:195

B3L9S4              	100.00%		D3AW31              	100.00%
Bootstrap support for B3L9S4 as seed ortholog is 100%.
Bootstrap support for D3AW31 as seed ortholog is 100%.

Group of orthologs #508. Best score 195 bits
Score difference with first non-orthologous sequence - P.knowlesi:25 P.pallidum:134

B3LAT3              	100.00%		D3B9R3              	100.00%
Bootstrap support for B3LAT3 as seed ortholog is 71%.
Alternative seed ortholog is B3L480 (25 bits away from this cluster)
Bootstrap support for D3B9R3 as seed ortholog is 99%.

Group of orthologs #509. Best score 194 bits
Score difference with first non-orthologous sequence - P.knowlesi:194 P.pallidum:194

B3L5D4              	100.00%		D3BAL0              	100.00%
Bootstrap support for B3L5D4 as seed ortholog is 100%.
Bootstrap support for D3BAL0 as seed ortholog is 100%.

Group of orthologs #510. Best score 194 bits
Score difference with first non-orthologous sequence - P.knowlesi:194 P.pallidum:194

B3L3G8              	100.00%		D3BJY9              	100.00%
Bootstrap support for B3L3G8 as seed ortholog is 100%.
Bootstrap support for D3BJY9 as seed ortholog is 100%.

Group of orthologs #511. Best score 194 bits
Score difference with first non-orthologous sequence - P.knowlesi:194 P.pallidum:194

B3LAS9              	100.00%		D3BK61              	100.00%
Bootstrap support for B3LAS9 as seed ortholog is 100%.
Bootstrap support for D3BK61 as seed ortholog is 100%.

Group of orthologs #512. Best score 194 bits
Score difference with first non-orthologous sequence - P.knowlesi:194 P.pallidum:194

B3L698              	100.00%		D3BPW6              	100.00%
Bootstrap support for B3L698 as seed ortholog is 100%.
Bootstrap support for D3BPW6 as seed ortholog is 100%.

Group of orthologs #513. Best score 193 bits
Score difference with first non-orthologous sequence - P.knowlesi:193 P.pallidum:89

B3L9Q8              	100.00%		D3BCX1              	100.00%
                    	       		D3BJJ1              	30.55%
Bootstrap support for B3L9Q8 as seed ortholog is 100%.
Bootstrap support for D3BCX1 as seed ortholog is 98%.

Group of orthologs #514. Best score 193 bits
Score difference with first non-orthologous sequence - P.knowlesi:193 P.pallidum:193

B3L8H9              	100.00%		D3BFQ0              	100.00%
Bootstrap support for B3L8H9 as seed ortholog is 100%.
Bootstrap support for D3BFQ0 as seed ortholog is 100%.

Group of orthologs #515. Best score 193 bits
Score difference with first non-orthologous sequence - P.knowlesi:193 P.pallidum:132

B3LAH8              	100.00%		D3BJX9              	100.00%
Bootstrap support for B3LAH8 as seed ortholog is 100%.
Bootstrap support for D3BJX9 as seed ortholog is 99%.

Group of orthologs #516. Best score 192 bits
Score difference with first non-orthologous sequence - P.knowlesi:92 P.pallidum:192

B3L5C8              	100.00%		D3B4H6              	100.00%
Bootstrap support for B3L5C8 as seed ortholog is 79%.
Bootstrap support for D3B4H6 as seed ortholog is 100%.

Group of orthologs #517. Best score 192 bits
Score difference with first non-orthologous sequence - P.knowlesi:192 P.pallidum:192

B3L2G0              	100.00%		D3BT31              	100.00%
Bootstrap support for B3L2G0 as seed ortholog is 100%.
Bootstrap support for D3BT31 as seed ortholog is 100%.

Group of orthologs #518. Best score 191 bits
Score difference with first non-orthologous sequence - P.knowlesi:191 P.pallidum:191

B3L435              	100.00%		D3AW89              	100.00%
Bootstrap support for B3L435 as seed ortholog is 100%.
Bootstrap support for D3AW89 as seed ortholog is 100%.

Group of orthologs #519. Best score 191 bits
Score difference with first non-orthologous sequence - P.knowlesi:191 P.pallidum:135

B3LBS4              	100.00%		D3AVM8              	100.00%
Bootstrap support for B3LBS4 as seed ortholog is 100%.
Bootstrap support for D3AVM8 as seed ortholog is 99%.

Group of orthologs #520. Best score 191 bits
Score difference with first non-orthologous sequence - P.knowlesi:191 P.pallidum:191

B3L625              	100.00%		D3BKC7              	100.00%
Bootstrap support for B3L625 as seed ortholog is 100%.
Bootstrap support for D3BKC7 as seed ortholog is 100%.

Group of orthologs #521. Best score 190 bits
Score difference with first non-orthologous sequence - P.knowlesi:190 P.pallidum:190

B3KZQ6              	100.00%		D3B8H0              	100.00%
Bootstrap support for B3KZQ6 as seed ortholog is 100%.
Bootstrap support for D3B8H0 as seed ortholog is 100%.

Group of orthologs #522. Best score 190 bits
Score difference with first non-orthologous sequence - P.knowlesi:96 P.pallidum:123

B3L291              	100.00%		D3B763              	100.00%
Bootstrap support for B3L291 as seed ortholog is 99%.
Bootstrap support for D3B763 as seed ortholog is 99%.

Group of orthologs #523. Best score 190 bits
Score difference with first non-orthologous sequence - P.knowlesi:33 P.pallidum:26

B3KZ74              	100.00%		D3BAY1              	100.00%
Bootstrap support for B3KZ74 as seed ortholog is 89%.
Bootstrap support for D3BAY1 as seed ortholog is 88%.

Group of orthologs #524. Best score 190 bits
Score difference with first non-orthologous sequence - P.knowlesi:190 P.pallidum:190

B3L1K9              	100.00%		D3BKU3              	100.00%
Bootstrap support for B3L1K9 as seed ortholog is 100%.
Bootstrap support for D3BKU3 as seed ortholog is 100%.

Group of orthologs #525. Best score 190 bits
Score difference with first non-orthologous sequence - P.knowlesi:190 P.pallidum:190

B3LD82              	100.00%		D3BCZ2              	100.00%
Bootstrap support for B3LD82 as seed ortholog is 100%.
Bootstrap support for D3BCZ2 as seed ortholog is 100%.

Group of orthologs #526. Best score 190 bits
Score difference with first non-orthologous sequence - P.knowlesi:190 P.pallidum:190

B3LCD7              	100.00%		D3BMW4              	100.00%
Bootstrap support for B3LCD7 as seed ortholog is 100%.
Bootstrap support for D3BMW4 as seed ortholog is 100%.

Group of orthologs #527. Best score 188 bits
Score difference with first non-orthologous sequence - P.knowlesi:188 P.pallidum:188

B3L3H1              	100.00%		D3B4A0              	100.00%
Bootstrap support for B3L3H1 as seed ortholog is 100%.
Bootstrap support for D3B4A0 as seed ortholog is 100%.

Group of orthologs #528. Best score 188 bits
Score difference with first non-orthologous sequence - P.knowlesi:188 P.pallidum:188

B3KZ72              	100.00%		D3BIA4              	100.00%
Bootstrap support for B3KZ72 as seed ortholog is 100%.
Bootstrap support for D3BIA4 as seed ortholog is 100%.

Group of orthologs #529. Best score 188 bits
Score difference with first non-orthologous sequence - P.knowlesi:105 P.pallidum:89

B3L5X6              	100.00%		D3BH42              	100.00%
Bootstrap support for B3L5X6 as seed ortholog is 99%.
Bootstrap support for D3BH42 as seed ortholog is 99%.

Group of orthologs #530. Best score 188 bits
Score difference with first non-orthologous sequence - P.knowlesi:58 P.pallidum:188

B3LD93              	100.00%		D3BAL5              	100.00%
Bootstrap support for B3LD93 as seed ortholog is 91%.
Bootstrap support for D3BAL5 as seed ortholog is 100%.

Group of orthologs #531. Best score 187 bits
Score difference with first non-orthologous sequence - P.knowlesi:187 P.pallidum:187

B3L1B5              	100.00%		D3AXB8              	100.00%
Bootstrap support for B3L1B5 as seed ortholog is 100%.
Bootstrap support for D3AXB8 as seed ortholog is 100%.

Group of orthologs #532. Best score 187 bits
Score difference with first non-orthologous sequence - P.knowlesi:187 P.pallidum:117

B3LAY2              	100.00%		D3BBQ7              	100.00%
Bootstrap support for B3LAY2 as seed ortholog is 100%.
Bootstrap support for D3BBQ7 as seed ortholog is 99%.

Group of orthologs #533. Best score 187 bits
Score difference with first non-orthologous sequence - P.knowlesi:116 P.pallidum:122

B3LD51              	100.00%		D3BM07              	100.00%
Bootstrap support for B3LD51 as seed ortholog is 99%.
Bootstrap support for D3BM07 as seed ortholog is 99%.

Group of orthologs #534. Best score 186 bits
Score difference with first non-orthologous sequence - P.knowlesi:186 P.pallidum:186

B3L5G8              	100.00%		D3BB44              	100.00%
Bootstrap support for B3L5G8 as seed ortholog is 100%.
Bootstrap support for D3BB44 as seed ortholog is 100%.

Group of orthologs #535. Best score 185 bits
Score difference with first non-orthologous sequence - P.knowlesi:101 P.pallidum:59

B3L1J2              	100.00%		D3B2M5              	100.00%
Bootstrap support for B3L1J2 as seed ortholog is 99%.
Bootstrap support for D3B2M5 as seed ortholog is 98%.

Group of orthologs #536. Best score 185 bits
Score difference with first non-orthologous sequence - P.knowlesi:185 P.pallidum:2

B3L918              	100.00%		D3BFK6              	100.00%
Bootstrap support for B3L918 as seed ortholog is 100%.
Bootstrap support for D3BFK6 as seed ortholog is 80%.

Group of orthologs #537. Best score 185 bits
Score difference with first non-orthologous sequence - P.knowlesi:185 P.pallidum:185

B3L7R2              	100.00%		D3BII7              	100.00%
Bootstrap support for B3L7R2 as seed ortholog is 100%.
Bootstrap support for D3BII7 as seed ortholog is 100%.

Group of orthologs #538. Best score 185 bits
Score difference with first non-orthologous sequence - P.knowlesi:57 P.pallidum:185

B3L702              	100.00%		D3BSY5              	100.00%
Bootstrap support for B3L702 as seed ortholog is 97%.
Bootstrap support for D3BSY5 as seed ortholog is 100%.

Group of orthologs #539. Best score 184 bits
Score difference with first non-orthologous sequence - P.knowlesi:184 P.pallidum:9

B3L632              	100.00%		D3B2S7              	100.00%
Bootstrap support for B3L632 as seed ortholog is 100%.
Bootstrap support for D3B2S7 as seed ortholog is 61%.
Alternative seed ortholog is D3B7E4 (9 bits away from this cluster)

Group of orthologs #540. Best score 184 bits
Score difference with first non-orthologous sequence - P.knowlesi:184 P.pallidum:184

B3L734              	100.00%		D3BBQ0              	100.00%
Bootstrap support for B3L734 as seed ortholog is 100%.
Bootstrap support for D3BBQ0 as seed ortholog is 100%.

Group of orthologs #541. Best score 184 bits
Score difference with first non-orthologous sequence - P.knowlesi:184 P.pallidum:184

B3LC68              	100.00%		D3BHJ3              	100.00%
Bootstrap support for B3LC68 as seed ortholog is 100%.
Bootstrap support for D3BHJ3 as seed ortholog is 100%.

Group of orthologs #542. Best score 184 bits
Score difference with first non-orthologous sequence - P.knowlesi:184 P.pallidum:184

B3LAD9              	100.00%		D3BV19              	100.00%
Bootstrap support for B3LAD9 as seed ortholog is 100%.
Bootstrap support for D3BV19 as seed ortholog is 100%.

Group of orthologs #543. Best score 184 bits
Score difference with first non-orthologous sequence - P.knowlesi:184 P.pallidum:87

B3LDB7              	100.00%		D3BVJ7              	100.00%
Bootstrap support for B3LDB7 as seed ortholog is 100%.
Bootstrap support for D3BVJ7 as seed ortholog is 99%.

Group of orthologs #544. Best score 183 bits
Score difference with first non-orthologous sequence - P.knowlesi:183 P.pallidum:183

B3L191              	100.00%		D3B913              	100.00%
Bootstrap support for B3L191 as seed ortholog is 100%.
Bootstrap support for D3B913 as seed ortholog is 100%.

Group of orthologs #545. Best score 183 bits
Score difference with first non-orthologous sequence - P.knowlesi:183 P.pallidum:183

B3LAT7              	100.00%		D3B1N8              	100.00%
Bootstrap support for B3LAT7 as seed ortholog is 100%.
Bootstrap support for D3B1N8 as seed ortholog is 100%.

Group of orthologs #546. Best score 183 bits
Score difference with first non-orthologous sequence - P.knowlesi:183 P.pallidum:183

B3L2P4              	100.00%		D3BQ00              	100.00%
Bootstrap support for B3L2P4 as seed ortholog is 100%.
Bootstrap support for D3BQ00 as seed ortholog is 100%.

Group of orthologs #547. Best score 182 bits
Score difference with first non-orthologous sequence - P.knowlesi:182 P.pallidum:182

B3LBQ5              	100.00%		D3AVH8              	100.00%
Bootstrap support for B3LBQ5 as seed ortholog is 100%.
Bootstrap support for D3AVH8 as seed ortholog is 100%.

Group of orthologs #548. Best score 182 bits
Score difference with first non-orthologous sequence - P.knowlesi:81 P.pallidum:116

B3L9W3              	100.00%		D3B6H6              	100.00%
Bootstrap support for B3L9W3 as seed ortholog is 99%.
Bootstrap support for D3B6H6 as seed ortholog is 99%.

Group of orthologs #549. Best score 182 bits
Score difference with first non-orthologous sequence - P.knowlesi:182 P.pallidum:182

B3L6X3              	100.00%		D3BQV7              	100.00%
Bootstrap support for B3L6X3 as seed ortholog is 100%.
Bootstrap support for D3BQV7 as seed ortholog is 100%.

Group of orthologs #550. Best score 181 bits
Score difference with first non-orthologous sequence - P.knowlesi:181 P.pallidum:181

B3L2P7              	100.00%		D3AXW3              	100.00%
Bootstrap support for B3L2P7 as seed ortholog is 100%.
Bootstrap support for D3AXW3 as seed ortholog is 100%.

Group of orthologs #551. Best score 181 bits
Score difference with first non-orthologous sequence - P.knowlesi:72 P.pallidum:3

B3LAI7              	100.00%		D3B5M6              	100.00%
Bootstrap support for B3LAI7 as seed ortholog is 73%.
Alternative seed ortholog is B3L0A3 (72 bits away from this cluster)
Bootstrap support for D3B5M6 as seed ortholog is 61%.
Alternative seed ortholog is D3BK57 (3 bits away from this cluster)

Group of orthologs #552. Best score 181 bits
Score difference with first non-orthologous sequence - P.knowlesi:181 P.pallidum:181

B3L9G8              	100.00%		D3B7C4              	100.00%
Bootstrap support for B3L9G8 as seed ortholog is 100%.
Bootstrap support for D3B7C4 as seed ortholog is 100%.

Group of orthologs #553. Best score 181 bits
Score difference with first non-orthologous sequence - P.knowlesi:181 P.pallidum:181

B3LCI8              	100.00%		D3BN51              	100.00%
Bootstrap support for B3LCI8 as seed ortholog is 100%.
Bootstrap support for D3BN51 as seed ortholog is 100%.

Group of orthologs #554. Best score 180 bits
Score difference with first non-orthologous sequence - P.knowlesi:180 P.pallidum:56

B3L7Y3              	100.00%		D3B217              	100.00%
                    	       		D3BHE7              	5.75%
Bootstrap support for B3L7Y3 as seed ortholog is 100%.
Bootstrap support for D3B217 as seed ortholog is 79%.

Group of orthologs #555. Best score 180 bits
Score difference with first non-orthologous sequence - P.knowlesi:180 P.pallidum:180

B3LBB3              	100.00%		D3B3C0              	100.00%
B3L4E9              	76.89%		
Bootstrap support for B3LBB3 as seed ortholog is 100%.
Bootstrap support for D3B3C0 as seed ortholog is 100%.

Group of orthologs #556. Best score 180 bits
Score difference with first non-orthologous sequence - P.knowlesi:127 P.pallidum:180

B3L684              	100.00%		D3B0F6              	100.00%
Bootstrap support for B3L684 as seed ortholog is 100%.
Bootstrap support for D3B0F6 as seed ortholog is 100%.

Group of orthologs #557. Best score 180 bits
Score difference with first non-orthologous sequence - P.knowlesi:180 P.pallidum:180

B3L947              	100.00%		D3BA80              	100.00%
Bootstrap support for B3L947 as seed ortholog is 100%.
Bootstrap support for D3BA80 as seed ortholog is 100%.

Group of orthologs #558. Best score 180 bits
Score difference with first non-orthologous sequence - P.knowlesi:180 P.pallidum:180

B3L8I5              	100.00%		D3BBP3              	100.00%
Bootstrap support for B3L8I5 as seed ortholog is 100%.
Bootstrap support for D3BBP3 as seed ortholog is 100%.

Group of orthologs #559. Best score 180 bits
Score difference with first non-orthologous sequence - P.knowlesi:180 P.pallidum:180

B3L5H2              	100.00%		D3BTM3              	100.00%
Bootstrap support for B3L5H2 as seed ortholog is 100%.
Bootstrap support for D3BTM3 as seed ortholog is 100%.

Group of orthologs #560. Best score 179 bits
Score difference with first non-orthologous sequence - P.knowlesi:179 P.pallidum:179

B3L5Y9              	100.00%		D3B9R2              	100.00%
Bootstrap support for B3L5Y9 as seed ortholog is 100%.
Bootstrap support for D3B9R2 as seed ortholog is 100%.

Group of orthologs #561. Best score 179 bits
Score difference with first non-orthologous sequence - P.knowlesi:179 P.pallidum:97

B3L1N7              	100.00%		D3BEA8              	100.00%
Bootstrap support for B3L1N7 as seed ortholog is 100%.
Bootstrap support for D3BEA8 as seed ortholog is 99%.

Group of orthologs #562. Best score 178 bits
Score difference with first non-orthologous sequence - P.knowlesi:178 P.pallidum:178

B3L3I1              	100.00%		D3B3U0              	100.00%
Bootstrap support for B3L3I1 as seed ortholog is 100%.
Bootstrap support for D3B3U0 as seed ortholog is 100%.

Group of orthologs #563. Best score 178 bits
Score difference with first non-orthologous sequence - P.knowlesi:178 P.pallidum:178

B3L8I6              	100.00%		D3B5J6              	100.00%
Bootstrap support for B3L8I6 as seed ortholog is 100%.
Bootstrap support for D3B5J6 as seed ortholog is 100%.

Group of orthologs #564. Best score 178 bits
Score difference with first non-orthologous sequence - P.knowlesi:178 P.pallidum:178

B3L904              	100.00%		D3BMQ1              	100.00%
Bootstrap support for B3L904 as seed ortholog is 100%.
Bootstrap support for D3BMQ1 as seed ortholog is 100%.

Group of orthologs #565. Best score 178 bits
Score difference with first non-orthologous sequence - P.knowlesi:82 P.pallidum:25

B3L4Y4              	100.00%		D3BU73              	100.00%
Bootstrap support for B3L4Y4 as seed ortholog is 100%.
Bootstrap support for D3BU73 as seed ortholog is 93%.

Group of orthologs #566. Best score 178 bits
Score difference with first non-orthologous sequence - P.knowlesi:178 P.pallidum:178

B3LBQ9              	100.00%		D3BPC0              	100.00%
Bootstrap support for B3LBQ9 as seed ortholog is 100%.
Bootstrap support for D3BPC0 as seed ortholog is 100%.

Group of orthologs #567. Best score 177 bits
Score difference with first non-orthologous sequence - P.knowlesi:41 P.pallidum:177

B3L8A0              	100.00%		D3B9V6              	100.00%
                    	       		D3BRB3              	5.10%
Bootstrap support for B3L8A0 as seed ortholog is 90%.
Bootstrap support for D3B9V6 as seed ortholog is 100%.

Group of orthologs #568. Best score 177 bits
Score difference with first non-orthologous sequence - P.knowlesi:177 P.pallidum:177

B3L267              	100.00%		D3BBM0              	100.00%
Bootstrap support for B3L267 as seed ortholog is 100%.
Bootstrap support for D3BBM0 as seed ortholog is 100%.

Group of orthologs #569. Best score 177 bits
Score difference with first non-orthologous sequence - P.knowlesi:177 P.pallidum:177

B3LA44              	100.00%		D3BC80              	100.00%
Bootstrap support for B3LA44 as seed ortholog is 100%.
Bootstrap support for D3BC80 as seed ortholog is 100%.

Group of orthologs #570. Best score 177 bits
Score difference with first non-orthologous sequence - P.knowlesi:177 P.pallidum:177

B3L7T1              	100.00%		D3BGB9              	100.00%
Bootstrap support for B3L7T1 as seed ortholog is 100%.
Bootstrap support for D3BGB9 as seed ortholog is 100%.

Group of orthologs #571. Best score 177 bits
Score difference with first non-orthologous sequence - P.knowlesi:177 P.pallidum:132

B3L6V5              	100.00%		D3BL27              	100.00%
Bootstrap support for B3L6V5 as seed ortholog is 100%.
Bootstrap support for D3BL27 as seed ortholog is 100%.

Group of orthologs #572. Best score 176 bits
Score difference with first non-orthologous sequence - P.knowlesi:176 P.pallidum:176

B3L3L2              	100.00%		D3B418              	100.00%
Bootstrap support for B3L3L2 as seed ortholog is 100%.
Bootstrap support for D3B418 as seed ortholog is 100%.

Group of orthologs #573. Best score 176 bits
Score difference with first non-orthologous sequence - P.knowlesi:176 P.pallidum:176

B3LAS3              	100.00%		D3B0K6              	100.00%
Bootstrap support for B3LAS3 as seed ortholog is 100%.
Bootstrap support for D3B0K6 as seed ortholog is 100%.

Group of orthologs #574. Best score 176 bits
Score difference with first non-orthologous sequence - P.knowlesi:176 P.pallidum:176

B3L8I7              	100.00%		D3BBH0              	100.00%
Bootstrap support for B3L8I7 as seed ortholog is 100%.
Bootstrap support for D3BBH0 as seed ortholog is 100%.

Group of orthologs #575. Best score 176 bits
Score difference with first non-orthologous sequence - P.knowlesi:176 P.pallidum:176

B3L8Z3              	100.00%		D3BD97              	100.00%
Bootstrap support for B3L8Z3 as seed ortholog is 100%.
Bootstrap support for D3BD97 as seed ortholog is 100%.

Group of orthologs #576. Best score 175 bits
Score difference with first non-orthologous sequence - P.knowlesi:175 P.pallidum:175

B3L673              	100.00%		D3B6L1              	100.00%
Bootstrap support for B3L673 as seed ortholog is 100%.
Bootstrap support for D3B6L1 as seed ortholog is 100%.

Group of orthologs #577. Best score 175 bits
Score difference with first non-orthologous sequence - P.knowlesi:175 P.pallidum:175

B3L6T1              	100.00%		D3B761              	100.00%
Bootstrap support for B3L6T1 as seed ortholog is 100%.
Bootstrap support for D3B761 as seed ortholog is 100%.

Group of orthologs #578. Best score 175 bits
Score difference with first non-orthologous sequence - P.knowlesi:175 P.pallidum:175

B3L9M4              	100.00%		D3BKX3              	100.00%
Bootstrap support for B3L9M4 as seed ortholog is 100%.
Bootstrap support for D3BKX3 as seed ortholog is 100%.

Group of orthologs #579. Best score 173 bits
Score difference with first non-orthologous sequence - P.knowlesi:3 P.pallidum:173

B3LDA2              	100.00%		D3B5Y1              	100.00%
Bootstrap support for B3LDA2 as seed ortholog is 51%.
Alternative seed ortholog is B3LAK3 (3 bits away from this cluster)
Bootstrap support for D3B5Y1 as seed ortholog is 100%.

Group of orthologs #580. Best score 173 bits
Score difference with first non-orthologous sequence - P.knowlesi:173 P.pallidum:173

B3L635              	100.00%		D3BN47              	100.00%
Bootstrap support for B3L635 as seed ortholog is 100%.
Bootstrap support for D3BN47 as seed ortholog is 100%.

Group of orthologs #581. Best score 173 bits
Score difference with first non-orthologous sequence - P.knowlesi:173 P.pallidum:173

B3L829              	100.00%		D3BUI7              	100.00%
Bootstrap support for B3L829 as seed ortholog is 100%.
Bootstrap support for D3BUI7 as seed ortholog is 100%.

Group of orthologs #582. Best score 172 bits
Score difference with first non-orthologous sequence - P.knowlesi:172 P.pallidum:172

B3L4G2              	100.00%		D3AZ84              	100.00%
                    	       		D3BV70              	11.84%
Bootstrap support for B3L4G2 as seed ortholog is 100%.
Bootstrap support for D3AZ84 as seed ortholog is 100%.

Group of orthologs #583. Best score 172 bits
Score difference with first non-orthologous sequence - P.knowlesi:172 P.pallidum:172

B3LBY1              	100.00%		D3BEU0              	100.00%
Bootstrap support for B3LBY1 as seed ortholog is 100%.
Bootstrap support for D3BEU0 as seed ortholog is 100%.

Group of orthologs #584. Best score 171 bits
Score difference with first non-orthologous sequence - P.knowlesi:171 P.pallidum:8

B3L4V5              	100.00%		D3B6N0              	100.00%
B3L4V3              	59.93%		D3BB13              	42.82%
B3L4V4              	50.68%		D3BB03              	30.42%
                    	       		D3BL12              	13.78%
                    	       		D3BKJ7              	11.14%
                    	       		D3BCE4              	8.27%
                    	       		D3B314              	6.66%
Bootstrap support for B3L4V5 as seed ortholog is 100%.
Bootstrap support for D3B6N0 as seed ortholog is 50%.
Alternative seed ortholog is D3BJ60 (8 bits away from this cluster)

Group of orthologs #585. Best score 171 bits
Score difference with first non-orthologous sequence - P.knowlesi:171 P.pallidum:55

B3L0V4              	100.00%		D3BQB2              	100.00%
                    	       		D3BQB6              	29.77%
Bootstrap support for B3L0V4 as seed ortholog is 100%.
Bootstrap support for D3BQB2 as seed ortholog is 87%.

Group of orthologs #586. Best score 171 bits
Score difference with first non-orthologous sequence - P.knowlesi:40 P.pallidum:38

B3L9Z7              	100.00%		D3B2T9              	100.00%
Bootstrap support for B3L9Z7 as seed ortholog is 84%.
Bootstrap support for D3B2T9 as seed ortholog is 96%.

Group of orthologs #587. Best score 171 bits
Score difference with first non-orthologous sequence - P.knowlesi:171 P.pallidum:171

B3L6K9              	100.00%		D3BSM2              	100.00%
Bootstrap support for B3L6K9 as seed ortholog is 100%.
Bootstrap support for D3BSM2 as seed ortholog is 100%.

Group of orthologs #588. Best score 170 bits
Score difference with first non-orthologous sequence - P.knowlesi:170 P.pallidum:170

B3L8G3              	100.00%		D3B1Q0              	100.00%
Bootstrap support for B3L8G3 as seed ortholog is 100%.
Bootstrap support for D3B1Q0 as seed ortholog is 100%.

Group of orthologs #589. Best score 170 bits
Score difference with first non-orthologous sequence - P.knowlesi:170 P.pallidum:170

B3L544              	100.00%		D3BPI1              	100.00%
Bootstrap support for B3L544 as seed ortholog is 100%.
Bootstrap support for D3BPI1 as seed ortholog is 100%.

Group of orthologs #590. Best score 170 bits
Score difference with first non-orthologous sequence - P.knowlesi:170 P.pallidum:170

B3LB29              	100.00%		D3BPP6              	100.00%
Bootstrap support for B3LB29 as seed ortholog is 100%.
Bootstrap support for D3BPP6 as seed ortholog is 100%.

Group of orthologs #591. Best score 170 bits
Score difference with first non-orthologous sequence - P.knowlesi:115 P.pallidum:170

B3LB10              	100.00%		D3BVF8              	100.00%
Bootstrap support for B3LB10 as seed ortholog is 99%.
Bootstrap support for D3BVF8 as seed ortholog is 100%.

Group of orthologs #592. Best score 169 bits
Score difference with first non-orthologous sequence - P.knowlesi:169 P.pallidum:169

B3L2V1              	100.00%		D3BT90              	100.00%
                    	       		D3AXS4              	10.00%
Bootstrap support for B3L2V1 as seed ortholog is 100%.
Bootstrap support for D3BT90 as seed ortholog is 100%.

Group of orthologs #593. Best score 169 bits
Score difference with first non-orthologous sequence - P.knowlesi:107 P.pallidum:169

B3L6X6              	100.00%		D3BAF1              	100.00%
Bootstrap support for B3L6X6 as seed ortholog is 99%.
Bootstrap support for D3BAF1 as seed ortholog is 100%.

Group of orthologs #594. Best score 169 bits
Score difference with first non-orthologous sequence - P.knowlesi:169 P.pallidum:94

B3L410              	100.00%		D3BP64              	100.00%
Bootstrap support for B3L410 as seed ortholog is 100%.
Bootstrap support for D3BP64 as seed ortholog is 100%.

Group of orthologs #595. Best score 169 bits
Score difference with first non-orthologous sequence - P.knowlesi:169 P.pallidum:169

B3L5G5              	100.00%		D3BMT7              	100.00%
Bootstrap support for B3L5G5 as seed ortholog is 100%.
Bootstrap support for D3BMT7 as seed ortholog is 100%.

Group of orthologs #596. Best score 168 bits
Score difference with first non-orthologous sequence - P.knowlesi:168 P.pallidum:168

B3KZH2              	100.00%		D3BLZ2              	100.00%
                    	       		D3BC04              	6.73%
Bootstrap support for B3KZH2 as seed ortholog is 100%.
Bootstrap support for D3BLZ2 as seed ortholog is 100%.

Group of orthologs #597. Best score 168 bits
Score difference with first non-orthologous sequence - P.knowlesi:168 P.pallidum:168

B3L6Q5              	100.00%		D3BRB4              	100.00%
Bootstrap support for B3L6Q5 as seed ortholog is 100%.
Bootstrap support for D3BRB4 as seed ortholog is 100%.

Group of orthologs #598. Best score 167 bits
Score difference with first non-orthologous sequence - P.knowlesi:167 P.pallidum:167

B3L441              	100.00%		D3B2Q1              	100.00%
Bootstrap support for B3L441 as seed ortholog is 100%.
Bootstrap support for D3B2Q1 as seed ortholog is 100%.

Group of orthologs #599. Best score 166 bits
Score difference with first non-orthologous sequence - P.knowlesi:166 P.pallidum:166

B3LA28              	100.00%		D3BEP4              	100.00%
B3LCE5              	21.40%		
Bootstrap support for B3LA28 as seed ortholog is 100%.
Bootstrap support for D3BEP4 as seed ortholog is 100%.

Group of orthologs #600. Best score 166 bits
Score difference with first non-orthologous sequence - P.knowlesi:166 P.pallidum:166

B3L5K2              	100.00%		D3AWD3              	100.00%
Bootstrap support for B3L5K2 as seed ortholog is 100%.
Bootstrap support for D3AWD3 as seed ortholog is 100%.

Group of orthologs #601. Best score 166 bits
Score difference with first non-orthologous sequence - P.knowlesi:42 P.pallidum:7

B3L603              	100.00%		D3B6P7              	100.00%
Bootstrap support for B3L603 as seed ortholog is 88%.
Bootstrap support for D3B6P7 as seed ortholog is 59%.
Alternative seed ortholog is D3BUT4 (7 bits away from this cluster)

Group of orthologs #602. Best score 166 bits
Score difference with first non-orthologous sequence - P.knowlesi:166 P.pallidum:166

B3LA41              	100.00%		D3B3R7              	100.00%
Bootstrap support for B3LA41 as seed ortholog is 100%.
Bootstrap support for D3B3R7 as seed ortholog is 100%.

Group of orthologs #603. Best score 166 bits
Score difference with first non-orthologous sequence - P.knowlesi:166 P.pallidum:166

B3LA31              	100.00%		D3BAC6              	100.00%
Bootstrap support for B3LA31 as seed ortholog is 100%.
Bootstrap support for D3BAC6 as seed ortholog is 100%.

Group of orthologs #604. Best score 166 bits
Score difference with first non-orthologous sequence - P.knowlesi:9 P.pallidum:166

B3KZ03              	100.00%		D3BPQ9              	100.00%
Bootstrap support for B3KZ03 as seed ortholog is 53%.
Alternative seed ortholog is B3LCR1 (9 bits away from this cluster)
Bootstrap support for D3BPQ9 as seed ortholog is 100%.

Group of orthologs #605. Best score 166 bits
Score difference with first non-orthologous sequence - P.knowlesi:111 P.pallidum:166

B3L8R4              	100.00%		D3BMX5              	100.00%
Bootstrap support for B3L8R4 as seed ortholog is 100%.
Bootstrap support for D3BMX5 as seed ortholog is 100%.

Group of orthologs #606. Best score 165 bits
Score difference with first non-orthologous sequence - P.knowlesi:165 P.pallidum:165

B3L4B7              	100.00%		D3B0K1              	100.00%
Bootstrap support for B3L4B7 as seed ortholog is 100%.
Bootstrap support for D3B0K1 as seed ortholog is 100%.

Group of orthologs #607. Best score 165 bits
Score difference with first non-orthologous sequence - P.knowlesi:165 P.pallidum:165

B3LAU3              	100.00%		D3B465              	100.00%
Bootstrap support for B3LAU3 as seed ortholog is 100%.
Bootstrap support for D3B465 as seed ortholog is 100%.

Group of orthologs #608. Best score 164 bits
Score difference with first non-orthologous sequence - P.knowlesi:164 P.pallidum:164

B3KZK0              	100.00%		D3B0C2              	100.00%
                    	       		D3AZN2              	52.03%
Bootstrap support for B3KZK0 as seed ortholog is 100%.
Bootstrap support for D3B0C2 as seed ortholog is 100%.

Group of orthologs #609. Best score 164 bits
Score difference with first non-orthologous sequence - P.knowlesi:164 P.pallidum:164

B3KZL3              	100.00%		D3BB37              	100.00%
Bootstrap support for B3KZL3 as seed ortholog is 100%.
Bootstrap support for D3BB37 as seed ortholog is 100%.

Group of orthologs #610. Best score 164 bits
Score difference with first non-orthologous sequence - P.knowlesi:91 P.pallidum:55

B3L4H5              	100.00%		D3BH32              	100.00%
Bootstrap support for B3L4H5 as seed ortholog is 51%.
Alternative seed ortholog is B3L4U0 (91 bits away from this cluster)
Bootstrap support for D3BH32 as seed ortholog is 68%.
Alternative seed ortholog is D3AYR5 (55 bits away from this cluster)

Group of orthologs #611. Best score 164 bits
Score difference with first non-orthologous sequence - P.knowlesi:23 P.pallidum:164

B3L4I9              	100.00%		D3BI96              	100.00%
Bootstrap support for B3L4I9 as seed ortholog is 83%.
Bootstrap support for D3BI96 as seed ortholog is 100%.

Group of orthologs #612. Best score 164 bits
Score difference with first non-orthologous sequence - P.knowlesi:164 P.pallidum:164

B3L6H9              	100.00%		D3BNG5              	100.00%
Bootstrap support for B3L6H9 as seed ortholog is 100%.
Bootstrap support for D3BNG5 as seed ortholog is 100%.

Group of orthologs #613. Best score 164 bits
Score difference with first non-orthologous sequence - P.knowlesi:164 P.pallidum:164

B3L7B0              	100.00%		D3BNW2              	100.00%
Bootstrap support for B3L7B0 as seed ortholog is 100%.
Bootstrap support for D3BNW2 as seed ortholog is 100%.

Group of orthologs #614. Best score 164 bits
Score difference with first non-orthologous sequence - P.knowlesi:164 P.pallidum:164

B3L4X4              	100.00%		D3BS99              	100.00%
Bootstrap support for B3L4X4 as seed ortholog is 100%.
Bootstrap support for D3BS99 as seed ortholog is 100%.

Group of orthologs #615. Best score 163 bits
Score difference with first non-orthologous sequence - P.knowlesi:81 P.pallidum:48

B3L3A0              	100.00%		D3BR25              	100.00%
Bootstrap support for B3L3A0 as seed ortholog is 97%.
Bootstrap support for D3BR25 as seed ortholog is 92%.

Group of orthologs #616. Best score 163 bits
Score difference with first non-orthologous sequence - P.knowlesi:44 P.pallidum:65

B3L7Z4              	100.00%		D3BQS8              	100.00%
Bootstrap support for B3L7Z4 as seed ortholog is 96%.
Bootstrap support for D3BQS8 as seed ortholog is 99%.

Group of orthologs #617. Best score 163 bits
Score difference with first non-orthologous sequence - P.knowlesi:163 P.pallidum:163

B3L550              	100.00%		D3BUI9              	100.00%
Bootstrap support for B3L550 as seed ortholog is 100%.
Bootstrap support for D3BUI9 as seed ortholog is 100%.

Group of orthologs #618. Best score 162 bits
Score difference with first non-orthologous sequence - P.knowlesi:162 P.pallidum:33

B3L9L6              	100.00%		D3BJM3              	100.00%
Bootstrap support for B3L9L6 as seed ortholog is 100%.
Bootstrap support for D3BJM3 as seed ortholog is 87%.

Group of orthologs #619. Best score 161 bits
Score difference with first non-orthologous sequence - P.knowlesi:161 P.pallidum:161

B3L319              	100.00%		D3AZD5              	100.00%
Bootstrap support for B3L319 as seed ortholog is 100%.
Bootstrap support for D3AZD5 as seed ortholog is 100%.

Group of orthologs #620. Best score 161 bits
Score difference with first non-orthologous sequence - P.knowlesi:161 P.pallidum:161

B3LA78              	100.00%		D3AYJ1              	100.00%
Bootstrap support for B3LA78 as seed ortholog is 100%.
Bootstrap support for D3AYJ1 as seed ortholog is 100%.

Group of orthologs #621. Best score 161 bits
Score difference with first non-orthologous sequence - P.knowlesi:161 P.pallidum:161

B3LBZ3              	100.00%		D3B437              	100.00%
Bootstrap support for B3LBZ3 as seed ortholog is 100%.
Bootstrap support for D3B437 as seed ortholog is 100%.

Group of orthologs #622. Best score 161 bits
Score difference with first non-orthologous sequence - P.knowlesi:161 P.pallidum:161

B3L124              	100.00%		D3BNZ1              	100.00%
Bootstrap support for B3L124 as seed ortholog is 100%.
Bootstrap support for D3BNZ1 as seed ortholog is 100%.

Group of orthologs #623. Best score 161 bits
Score difference with first non-orthologous sequence - P.knowlesi:161 P.pallidum:161

B3L8T1              	100.00%		D3BGW6              	100.00%
Bootstrap support for B3L8T1 as seed ortholog is 100%.
Bootstrap support for D3BGW6 as seed ortholog is 100%.

Group of orthologs #624. Best score 160 bits
Score difference with first non-orthologous sequence - P.knowlesi:160 P.pallidum:26

B3L4T4              	100.00%		D3B1Z1              	100.00%
Bootstrap support for B3L4T4 as seed ortholog is 100%.
Bootstrap support for D3B1Z1 as seed ortholog is 75%.

Group of orthologs #625. Best score 160 bits
Score difference with first non-orthologous sequence - P.knowlesi:160 P.pallidum:160

B3L136              	100.00%		D3B6N9              	100.00%
Bootstrap support for B3L136 as seed ortholog is 100%.
Bootstrap support for D3B6N9 as seed ortholog is 100%.

Group of orthologs #626. Best score 160 bits
Score difference with first non-orthologous sequence - P.knowlesi:160 P.pallidum:160

B3L8R9              	100.00%		D3B6Y3              	100.00%
Bootstrap support for B3L8R9 as seed ortholog is 100%.
Bootstrap support for D3B6Y3 as seed ortholog is 100%.

Group of orthologs #627. Best score 160 bits
Score difference with first non-orthologous sequence - P.knowlesi:160 P.pallidum:160

B3LCY2              	100.00%		D3BBS0              	100.00%
Bootstrap support for B3LCY2 as seed ortholog is 100%.
Bootstrap support for D3BBS0 as seed ortholog is 100%.

Group of orthologs #628. Best score 159 bits
Score difference with first non-orthologous sequence - P.knowlesi:106 P.pallidum:159

B3LB81              	100.00%		D3BTD3              	100.00%
Bootstrap support for B3LB81 as seed ortholog is 99%.
Bootstrap support for D3BTD3 as seed ortholog is 100%.

Group of orthologs #629. Best score 158 bits
Score difference with first non-orthologous sequence - P.knowlesi:158 P.pallidum:158

B3LC06              	100.00%		D3BD43              	100.00%
                    	       		D3B2E5              	10.49%
Bootstrap support for B3LC06 as seed ortholog is 100%.
Bootstrap support for D3BD43 as seed ortholog is 100%.

Group of orthologs #630. Best score 158 bits
Score difference with first non-orthologous sequence - P.knowlesi:112 P.pallidum:158

B3KZA9              	100.00%		D3AZF9              	100.00%
Bootstrap support for B3KZA9 as seed ortholog is 99%.
Bootstrap support for D3AZF9 as seed ortholog is 100%.

Group of orthologs #631. Best score 158 bits
Score difference with first non-orthologous sequence - P.knowlesi:158 P.pallidum:158

B3KZ34              	100.00%		D3B7M3              	100.00%
Bootstrap support for B3KZ34 as seed ortholog is 100%.
Bootstrap support for D3B7M3 as seed ortholog is 100%.

Group of orthologs #632. Best score 158 bits
Score difference with first non-orthologous sequence - P.knowlesi:158 P.pallidum:158

B3L3G4              	100.00%		D3B439              	100.00%
Bootstrap support for B3L3G4 as seed ortholog is 100%.
Bootstrap support for D3B439 as seed ortholog is 100%.

Group of orthologs #633. Best score 158 bits
Score difference with first non-orthologous sequence - P.knowlesi:87 P.pallidum:35

B3L9Q0              	100.00%		D3BCG7              	100.00%
Bootstrap support for B3L9Q0 as seed ortholog is 99%.
Bootstrap support for D3BCG7 as seed ortholog is 97%.

Group of orthologs #634. Best score 158 bits
Score difference with first non-orthologous sequence - P.knowlesi:158 P.pallidum:158

B3L4T2              	100.00%		D3BIR6              	100.00%
Bootstrap support for B3L4T2 as seed ortholog is 100%.
Bootstrap support for D3BIR6 as seed ortholog is 100%.

Group of orthologs #635. Best score 158 bits
Score difference with first non-orthologous sequence - P.knowlesi:19 P.pallidum:158

B3L9M6              	100.00%		D3BR78              	100.00%
Bootstrap support for B3L9M6 as seed ortholog is 65%.
Alternative seed ortholog is B3L4A6 (19 bits away from this cluster)
Bootstrap support for D3BR78 as seed ortholog is 100%.

Group of orthologs #636. Best score 157 bits
Score difference with first non-orthologous sequence - P.knowlesi:157 P.pallidum:157

B3LC28              	100.00%		D3B3H3              	100.00%
Bootstrap support for B3LC28 as seed ortholog is 100%.
Bootstrap support for D3B3H3 as seed ortholog is 100%.

Group of orthologs #637. Best score 157 bits
Score difference with first non-orthologous sequence - P.knowlesi:157 P.pallidum:157

B3LB55              	100.00%		D3BMJ9              	100.00%
Bootstrap support for B3LB55 as seed ortholog is 100%.
Bootstrap support for D3BMJ9 as seed ortholog is 100%.

Group of orthologs #638. Best score 156 bits
Score difference with first non-orthologous sequence - P.knowlesi:156 P.pallidum:45

B3L3N6              	100.00%		D3BN32              	100.00%
                    	       		D3B294              	62.37%
                    	       		D3BN31              	50.00%
Bootstrap support for B3L3N6 as seed ortholog is 100%.
Bootstrap support for D3BN32 as seed ortholog is 85%.

Group of orthologs #639. Best score 156 bits
Score difference with first non-orthologous sequence - P.knowlesi:156 P.pallidum:156

B3L7A5              	100.00%		D3BL03              	100.00%
                    	       		D3B2W9              	23.13%
                    	       		D3B027              	12.23%
Bootstrap support for B3L7A5 as seed ortholog is 100%.
Bootstrap support for D3BL03 as seed ortholog is 100%.

Group of orthologs #640. Best score 156 bits
Score difference with first non-orthologous sequence - P.knowlesi:156 P.pallidum:97

B3KZC5              	100.00%		D3BFU9              	100.00%
                    	       		D3BFU8              	13.89%
Bootstrap support for B3KZC5 as seed ortholog is 100%.
Bootstrap support for D3BFU9 as seed ortholog is 99%.

Group of orthologs #641. Best score 156 bits
Score difference with first non-orthologous sequence - P.knowlesi:48 P.pallidum:15

B3L2M7              	100.00%		D3BJU4              	100.00%
                    	       		D3BAU0              	32.94%
Bootstrap support for B3L2M7 as seed ortholog is 97%.
Bootstrap support for D3BJU4 as seed ortholog is 65%.
Alternative seed ortholog is D3BQ39 (15 bits away from this cluster)

Group of orthologs #642. Best score 156 bits
Score difference with first non-orthologous sequence - P.knowlesi:156 P.pallidum:156

B3LCJ4              	100.00%		D3AW49              	100.00%
Bootstrap support for B3LCJ4 as seed ortholog is 100%.
Bootstrap support for D3AW49 as seed ortholog is 100%.

Group of orthologs #643. Best score 155 bits
Score difference with first non-orthologous sequence - P.knowlesi:155 P.pallidum:155

B3KYX9              	100.00%		D3BL58              	100.00%
                    	       		D3BL57              	44.93%
Bootstrap support for B3KYX9 as seed ortholog is 100%.
Bootstrap support for D3BL58 as seed ortholog is 100%.

Group of orthologs #644. Best score 155 bits
Score difference with first non-orthologous sequence - P.knowlesi:155 P.pallidum:155

B3L052              	100.00%		D3B3B2              	100.00%
Bootstrap support for B3L052 as seed ortholog is 100%.
Bootstrap support for D3B3B2 as seed ortholog is 100%.

Group of orthologs #645. Best score 155 bits
Score difference with first non-orthologous sequence - P.knowlesi:155 P.pallidum:155

B3L398              	100.00%		D3B8K6              	100.00%
Bootstrap support for B3L398 as seed ortholog is 100%.
Bootstrap support for D3B8K6 as seed ortholog is 100%.

Group of orthologs #646. Best score 155 bits
Score difference with first non-orthologous sequence - P.knowlesi:155 P.pallidum:155

B3L362              	100.00%		D3BAH5              	100.00%
Bootstrap support for B3L362 as seed ortholog is 100%.
Bootstrap support for D3BAH5 as seed ortholog is 100%.

Group of orthologs #647. Best score 155 bits
Score difference with first non-orthologous sequence - P.knowlesi:155 P.pallidum:155

B3L3N3              	100.00%		D3BRH9              	100.00%
Bootstrap support for B3L3N3 as seed ortholog is 100%.
Bootstrap support for D3BRH9 as seed ortholog is 100%.

Group of orthologs #648. Best score 155 bits
Score difference with first non-orthologous sequence - P.knowlesi:155 P.pallidum:155

B3L6Y7              	100.00%		D3BPG0              	100.00%
Bootstrap support for B3L6Y7 as seed ortholog is 100%.
Bootstrap support for D3BPG0 as seed ortholog is 100%.

Group of orthologs #649. Best score 154 bits
Score difference with first non-orthologous sequence - P.knowlesi:154 P.pallidum:154

B3L5Y1              	100.00%		D3AVQ5              	100.00%
Bootstrap support for B3L5Y1 as seed ortholog is 100%.
Bootstrap support for D3AVQ5 as seed ortholog is 100%.

Group of orthologs #650. Best score 154 bits
Score difference with first non-orthologous sequence - P.knowlesi:154 P.pallidum:154

B3L782              	100.00%		D3B6L2              	100.00%
Bootstrap support for B3L782 as seed ortholog is 100%.
Bootstrap support for D3B6L2 as seed ortholog is 100%.

Group of orthologs #651. Best score 154 bits
Score difference with first non-orthologous sequence - P.knowlesi:96 P.pallidum:154

B3KZF9              	100.00%		D3BJW0              	100.00%
Bootstrap support for B3KZF9 as seed ortholog is 99%.
Bootstrap support for D3BJW0 as seed ortholog is 100%.

Group of orthologs #652. Best score 154 bits
Score difference with first non-orthologous sequence - P.knowlesi:154 P.pallidum:154

B3L747              	100.00%		D3BIZ7              	100.00%
Bootstrap support for B3L747 as seed ortholog is 100%.
Bootstrap support for D3BIZ7 as seed ortholog is 100%.

Group of orthologs #653. Best score 154 bits
Score difference with first non-orthologous sequence - P.knowlesi:154 P.pallidum:154

B3L2R8              	100.00%		D3BTM7              	100.00%
Bootstrap support for B3L2R8 as seed ortholog is 100%.
Bootstrap support for D3BTM7 as seed ortholog is 100%.

Group of orthologs #654. Best score 154 bits
Score difference with first non-orthologous sequence - P.knowlesi:154 P.pallidum:154

B3LDF1              	100.00%		D3BQQ9              	100.00%
Bootstrap support for B3LDF1 as seed ortholog is 100%.
Bootstrap support for D3BQQ9 as seed ortholog is 100%.

Group of orthologs #655. Best score 153 bits
Score difference with first non-orthologous sequence - P.knowlesi:153 P.pallidum:153

B3L4K2              	100.00%		D3AWN6              	100.00%
                    	       		D3BIG9              	15.00%
Bootstrap support for B3L4K2 as seed ortholog is 100%.
Bootstrap support for D3AWN6 as seed ortholog is 100%.

Group of orthologs #656. Best score 153 bits
Score difference with first non-orthologous sequence - P.knowlesi:153 P.pallidum:153

B3LA84              	100.00%		D3B061              	100.00%
B3LAJ5              	50.00%		
Bootstrap support for B3LA84 as seed ortholog is 100%.
Bootstrap support for D3B061 as seed ortholog is 100%.

Group of orthologs #657. Best score 153 bits
Score difference with first non-orthologous sequence - P.knowlesi:153 P.pallidum:153

B3L341              	100.00%		D3BCE9              	100.00%
Bootstrap support for B3L341 as seed ortholog is 100%.
Bootstrap support for D3BCE9 as seed ortholog is 100%.

Group of orthologs #658. Best score 153 bits
Score difference with first non-orthologous sequence - P.knowlesi:153 P.pallidum:153

B3LDF8              	100.00%		D3B3D8              	100.00%
Bootstrap support for B3LDF8 as seed ortholog is 100%.
Bootstrap support for D3B3D8 as seed ortholog is 100%.

Group of orthologs #659. Best score 153 bits
Score difference with first non-orthologous sequence - P.knowlesi:153 P.pallidum:153

B3LAZ0              	100.00%		D3BCF4              	100.00%
Bootstrap support for B3LAZ0 as seed ortholog is 100%.
Bootstrap support for D3BCF4 as seed ortholog is 100%.

Group of orthologs #660. Best score 153 bits
Score difference with first non-orthologous sequence - P.knowlesi:153 P.pallidum:22

B3LCM5              	100.00%		D3BGW7              	100.00%
Bootstrap support for B3LCM5 as seed ortholog is 100%.
Bootstrap support for D3BGW7 as seed ortholog is 81%.

Group of orthologs #661. Best score 152 bits
Score difference with first non-orthologous sequence - P.knowlesi:38 P.pallidum:40

B3L5X9              	100.00%		D3B8Q0              	100.00%
B3L241              	5.25%		
Bootstrap support for B3L5X9 as seed ortholog is 84%.
Bootstrap support for D3B8Q0 as seed ortholog is 79%.

Group of orthologs #662. Best score 152 bits
Score difference with first non-orthologous sequence - P.knowlesi:84 P.pallidum:152

B3L085              	100.00%		D3AWL9              	100.00%
Bootstrap support for B3L085 as seed ortholog is 97%.
Bootstrap support for D3AWL9 as seed ortholog is 100%.

Group of orthologs #663. Best score 152 bits
Score difference with first non-orthologous sequence - P.knowlesi:152 P.pallidum:152

B3KZ41              	100.00%		D3BH91              	100.00%
Bootstrap support for B3KZ41 as seed ortholog is 100%.
Bootstrap support for D3BH91 as seed ortholog is 100%.

Group of orthologs #664. Best score 152 bits
Score difference with first non-orthologous sequence - P.knowlesi:152 P.pallidum:152

B3L6C0              	100.00%		D3BKB6              	100.00%
Bootstrap support for B3L6C0 as seed ortholog is 100%.
Bootstrap support for D3BKB6 as seed ortholog is 100%.

Group of orthologs #665. Best score 151 bits
Score difference with first non-orthologous sequence - P.knowlesi:151 P.pallidum:151

B3LC08              	100.00%		D3AVI8              	100.00%
Bootstrap support for B3LC08 as seed ortholog is 100%.
Bootstrap support for D3AVI8 as seed ortholog is 100%.

Group of orthologs #666. Best score 151 bits
Score difference with first non-orthologous sequence - P.knowlesi:151 P.pallidum:151

B3L4X8              	100.00%		D3BT29              	100.00%
Bootstrap support for B3L4X8 as seed ortholog is 100%.
Bootstrap support for D3BT29 as seed ortholog is 100%.

Group of orthologs #667. Best score 151 bits
Score difference with first non-orthologous sequence - P.knowlesi:151 P.pallidum:151

B3L7Y2              	100.00%		D3BQE1              	100.00%
Bootstrap support for B3L7Y2 as seed ortholog is 100%.
Bootstrap support for D3BQE1 as seed ortholog is 100%.

Group of orthologs #668. Best score 150 bits
Score difference with first non-orthologous sequence - P.knowlesi:150 P.pallidum:150

B3LAF4              	100.00%		D3B8I8              	100.00%
Bootstrap support for B3LAF4 as seed ortholog is 100%.
Bootstrap support for D3B8I8 as seed ortholog is 100%.

Group of orthologs #669. Best score 150 bits
Score difference with first non-orthologous sequence - P.knowlesi:150 P.pallidum:150

B3L4N3              	100.00%		D3BH56              	100.00%
Bootstrap support for B3L4N3 as seed ortholog is 100%.
Bootstrap support for D3BH56 as seed ortholog is 100%.

Group of orthologs #670. Best score 150 bits
Score difference with first non-orthologous sequence - P.knowlesi:150 P.pallidum:150

B3LB83              	100.00%		D3BM56              	100.00%
Bootstrap support for B3LB83 as seed ortholog is 100%.
Bootstrap support for D3BM56 as seed ortholog is 100%.

Group of orthologs #671. Best score 150 bits
Score difference with first non-orthologous sequence - P.knowlesi:150 P.pallidum:8

B3L382              	100.00%		D3BVG0              	100.00%
Bootstrap support for B3L382 as seed ortholog is 100%.
Bootstrap support for D3BVG0 as seed ortholog is 80%.

Group of orthologs #672. Best score 149 bits
Score difference with first non-orthologous sequence - P.knowlesi:149 P.pallidum:149

B3KZT0              	100.00%		D3BJY4              	100.00%
Bootstrap support for B3KZT0 as seed ortholog is 100%.
Bootstrap support for D3BJY4 as seed ortholog is 100%.

Group of orthologs #673. Best score 149 bits
Score difference with first non-orthologous sequence - P.knowlesi:149 P.pallidum:149

B3L6W7              	100.00%		D3BLV1              	100.00%
Bootstrap support for B3L6W7 as seed ortholog is 100%.
Bootstrap support for D3BLV1 as seed ortholog is 100%.

Group of orthologs #674. Best score 149 bits
Score difference with first non-orthologous sequence - P.knowlesi:149 P.pallidum:88

B3LBK8              	100.00%		D3BLA0              	100.00%
Bootstrap support for B3LBK8 as seed ortholog is 100%.
Bootstrap support for D3BLA0 as seed ortholog is 99%.

Group of orthologs #675. Best score 148 bits
Score difference with first non-orthologous sequence - P.knowlesi:148 P.pallidum:148

B3L7L2              	100.00%		D3AX55              	100.00%
Bootstrap support for B3L7L2 as seed ortholog is 100%.
Bootstrap support for D3AX55 as seed ortholog is 100%.

Group of orthologs #676. Best score 148 bits
Score difference with first non-orthologous sequence - P.knowlesi:148 P.pallidum:148

B3L6X9              	100.00%		D3AXY6              	100.00%
Bootstrap support for B3L6X9 as seed ortholog is 100%.
Bootstrap support for D3AXY6 as seed ortholog is 100%.

Group of orthologs #677. Best score 148 bits
Score difference with first non-orthologous sequence - P.knowlesi:148 P.pallidum:148

B3KYZ6              	100.00%		D3BH30              	100.00%
Bootstrap support for B3KYZ6 as seed ortholog is 100%.
Bootstrap support for D3BH30 as seed ortholog is 100%.

Group of orthologs #678. Best score 148 bits
Score difference with first non-orthologous sequence - P.knowlesi:62 P.pallidum:78

B3LAB5              	100.00%		D3BKA2              	100.00%
Bootstrap support for B3LAB5 as seed ortholog is 99%.
Bootstrap support for D3BKA2 as seed ortholog is 99%.

Group of orthologs #679. Best score 147 bits
Score difference with first non-orthologous sequence - P.knowlesi:147 P.pallidum:147

B3L3P6              	100.00%		D3AVU9              	100.00%
Bootstrap support for B3L3P6 as seed ortholog is 100%.
Bootstrap support for D3AVU9 as seed ortholog is 100%.

Group of orthologs #680. Best score 147 bits
Score difference with first non-orthologous sequence - P.knowlesi:147 P.pallidum:147

B3LA96              	100.00%		D3B7L1              	100.00%
Bootstrap support for B3LA96 as seed ortholog is 100%.
Bootstrap support for D3B7L1 as seed ortholog is 100%.

Group of orthologs #681. Best score 147 bits
Score difference with first non-orthologous sequence - P.knowlesi:147 P.pallidum:147

B3L4R3              	100.00%		D3BK44              	100.00%
Bootstrap support for B3L4R3 as seed ortholog is 100%.
Bootstrap support for D3BK44 as seed ortholog is 100%.

Group of orthologs #682. Best score 147 bits
Score difference with first non-orthologous sequence - P.knowlesi:147 P.pallidum:147

B3L9F2              	100.00%		D3BFX3              	100.00%
Bootstrap support for B3L9F2 as seed ortholog is 100%.
Bootstrap support for D3BFX3 as seed ortholog is 100%.

Group of orthologs #683. Best score 146 bits
Score difference with first non-orthologous sequence - P.knowlesi:146 P.pallidum:146

B3LD83              	100.00%		D3B7P9              	100.00%
Bootstrap support for B3LD83 as seed ortholog is 100%.
Bootstrap support for D3B7P9 as seed ortholog is 100%.

Group of orthologs #684. Best score 146 bits
Score difference with first non-orthologous sequence - P.knowlesi:146 P.pallidum:146

B3L926              	100.00%		D3BIF6              	100.00%
Bootstrap support for B3L926 as seed ortholog is 100%.
Bootstrap support for D3BIF6 as seed ortholog is 100%.

Group of orthologs #685. Best score 146 bits
Score difference with first non-orthologous sequence - P.knowlesi:146 P.pallidum:146

B3L692              	100.00%		D3BLH6              	100.00%
Bootstrap support for B3L692 as seed ortholog is 100%.
Bootstrap support for D3BLH6 as seed ortholog is 100%.

Group of orthologs #686. Best score 145 bits
Score difference with first non-orthologous sequence - P.knowlesi:145 P.pallidum:145

B3LB59              	100.00%		D3BM11              	100.00%
Bootstrap support for B3LB59 as seed ortholog is 100%.
Bootstrap support for D3BM11 as seed ortholog is 100%.

Group of orthologs #687. Best score 145 bits
Score difference with first non-orthologous sequence - P.knowlesi:145 P.pallidum:145

B3L879              	100.00%		D3BQU5              	100.00%
Bootstrap support for B3L879 as seed ortholog is 100%.
Bootstrap support for D3BQU5 as seed ortholog is 100%.

Group of orthologs #688. Best score 144 bits
Score difference with first non-orthologous sequence - P.knowlesi:144 P.pallidum:144

B3L1D4              	100.00%		D3B544              	100.00%
Bootstrap support for B3L1D4 as seed ortholog is 100%.
Bootstrap support for D3B544 as seed ortholog is 100%.

Group of orthologs #689. Best score 144 bits
Score difference with first non-orthologous sequence - P.knowlesi:48 P.pallidum:43

B3L1P9              	100.00%		D3B6C9              	100.00%
Bootstrap support for B3L1P9 as seed ortholog is 98%.
Bootstrap support for D3B6C9 as seed ortholog is 96%.

Group of orthologs #690. Best score 144 bits
Score difference with first non-orthologous sequence - P.knowlesi:144 P.pallidum:144

B3LAX8              	100.00%		D3B114              	100.00%
Bootstrap support for B3LAX8 as seed ortholog is 100%.
Bootstrap support for D3B114 as seed ortholog is 100%.

Group of orthologs #691. Best score 144 bits
Score difference with first non-orthologous sequence - P.knowlesi:13 P.pallidum:30

B3L2N5              	100.00%		D3BCJ7              	100.00%
Bootstrap support for B3L2N5 as seed ortholog is 77%.
Bootstrap support for D3BCJ7 as seed ortholog is 88%.

Group of orthologs #692. Best score 144 bits
Score difference with first non-orthologous sequence - P.knowlesi:72 P.pallidum:144

B3LCQ7              	100.00%		D3BKV9              	100.00%
Bootstrap support for B3LCQ7 as seed ortholog is 91%.
Bootstrap support for D3BKV9 as seed ortholog is 100%.

Group of orthologs #693. Best score 143 bits
Score difference with first non-orthologous sequence - P.knowlesi:143 P.pallidum:143

B3L7C4              	100.00%		D3BHG8              	100.00%
                    	       		D3BS60              	11.98%
Bootstrap support for B3L7C4 as seed ortholog is 100%.
Bootstrap support for D3BHG8 as seed ortholog is 100%.

Group of orthologs #694. Best score 143 bits
Score difference with first non-orthologous sequence - P.knowlesi:143 P.pallidum:143

B3L8Z7              	100.00%		D3B822              	100.00%
Bootstrap support for B3L8Z7 as seed ortholog is 100%.
Bootstrap support for D3B822 as seed ortholog is 100%.

Group of orthologs #695. Best score 143 bits
Score difference with first non-orthologous sequence - P.knowlesi:143 P.pallidum:143

B3L2R9              	100.00%		D3BEV9              	100.00%
Bootstrap support for B3L2R9 as seed ortholog is 100%.
Bootstrap support for D3BEV9 as seed ortholog is 100%.

Group of orthologs #696. Best score 143 bits
Score difference with first non-orthologous sequence - P.knowlesi:143 P.pallidum:143

B3LCK5              	100.00%		D3BEI2              	100.00%
Bootstrap support for B3LCK5 as seed ortholog is 100%.
Bootstrap support for D3BEI2 as seed ortholog is 100%.

Group of orthologs #697. Best score 143 bits
Score difference with first non-orthologous sequence - P.knowlesi:143 P.pallidum:143

B3LD68              	100.00%		D3BIR0              	100.00%
Bootstrap support for B3LD68 as seed ortholog is 100%.
Bootstrap support for D3BIR0 as seed ortholog is 100%.

Group of orthologs #698. Best score 142 bits
Score difference with first non-orthologous sequence - P.knowlesi:142 P.pallidum:142

B3LA90              	100.00%		D3B586              	100.00%
Bootstrap support for B3LA90 as seed ortholog is 100%.
Bootstrap support for D3B586 as seed ortholog is 100%.

Group of orthologs #699. Best score 142 bits
Score difference with first non-orthologous sequence - P.knowlesi:142 P.pallidum:142

B3L4C4              	100.00%		D3BDZ0              	100.00%
Bootstrap support for B3L4C4 as seed ortholog is 100%.
Bootstrap support for D3BDZ0 as seed ortholog is 100%.

Group of orthologs #700. Best score 141 bits
Score difference with first non-orthologous sequence - P.knowlesi:141 P.pallidum:141

B3L828              	100.00%		D3B205              	100.00%
                    	       		D3B2A7              	49.45%
Bootstrap support for B3L828 as seed ortholog is 100%.
Bootstrap support for D3B205 as seed ortholog is 100%.

Group of orthologs #701. Best score 141 bits
Score difference with first non-orthologous sequence - P.knowlesi:57 P.pallidum:141

B3L610              	100.00%		D3B5U7              	100.00%
Bootstrap support for B3L610 as seed ortholog is 86%.
Bootstrap support for D3B5U7 as seed ortholog is 100%.

Group of orthologs #702. Best score 141 bits
Score difference with first non-orthologous sequence - P.knowlesi:141 P.pallidum:141

B3L4F6              	100.00%		D3B7U1              	100.00%
Bootstrap support for B3L4F6 as seed ortholog is 100%.
Bootstrap support for D3B7U1 as seed ortholog is 100%.

Group of orthologs #703. Best score 140 bits
Score difference with first non-orthologous sequence - P.knowlesi:140 P.pallidum:140

B3L4G6              	100.00%		D3BGI1              	100.00%
                    	       		D3B8C9              	16.91%
Bootstrap support for B3L4G6 as seed ortholog is 100%.
Bootstrap support for D3BGI1 as seed ortholog is 100%.

Group of orthologs #704. Best score 140 bits
Score difference with first non-orthologous sequence - P.knowlesi:140 P.pallidum:140

B3KZJ7              	100.00%		D3AZH8              	100.00%
Bootstrap support for B3KZJ7 as seed ortholog is 100%.
Bootstrap support for D3AZH8 as seed ortholog is 100%.

Group of orthologs #705. Best score 140 bits
Score difference with first non-orthologous sequence - P.knowlesi:140 P.pallidum:140

B3L2A8              	100.00%		D3AYW2              	100.00%
Bootstrap support for B3L2A8 as seed ortholog is 100%.
Bootstrap support for D3AYW2 as seed ortholog is 100%.

Group of orthologs #706. Best score 140 bits
Score difference with first non-orthologous sequence - P.knowlesi:140 P.pallidum:140

B3L9G0              	100.00%		D3B429              	100.00%
Bootstrap support for B3L9G0 as seed ortholog is 100%.
Bootstrap support for D3B429 as seed ortholog is 100%.

Group of orthologs #707. Best score 140 bits
Score difference with first non-orthologous sequence - P.knowlesi:140 P.pallidum:140

B3L948              	100.00%		D3BAH6              	100.00%
Bootstrap support for B3L948 as seed ortholog is 100%.
Bootstrap support for D3BAH6 as seed ortholog is 100%.

Group of orthologs #708. Best score 139 bits
Score difference with first non-orthologous sequence - P.knowlesi:25 P.pallidum:139

B3KZ83              	100.00%		D3AY37              	100.00%
Bootstrap support for B3KZ83 as seed ortholog is 69%.
Alternative seed ortholog is B3L629 (25 bits away from this cluster)
Bootstrap support for D3AY37 as seed ortholog is 100%.

Group of orthologs #709. Best score 139 bits
Score difference with first non-orthologous sequence - P.knowlesi:58 P.pallidum:86

B3L1Y3              	100.00%		D3B0Q7              	100.00%
Bootstrap support for B3L1Y3 as seed ortholog is 52%.
Alternative seed ortholog is B3L7A9 (58 bits away from this cluster)
Bootstrap support for D3B0Q7 as seed ortholog is 53%.
Alternative seed ortholog is D3BSW3 (86 bits away from this cluster)

Group of orthologs #710. Best score 139 bits
Score difference with first non-orthologous sequence - P.knowlesi:139 P.pallidum:139

B3L2Z9              	100.00%		D3B5G2              	100.00%
Bootstrap support for B3L2Z9 as seed ortholog is 100%.
Bootstrap support for D3B5G2 as seed ortholog is 100%.

Group of orthologs #711. Best score 139 bits
Score difference with first non-orthologous sequence - P.knowlesi:139 P.pallidum:139

B3LA40              	100.00%		D3B3U3              	100.00%
Bootstrap support for B3LA40 as seed ortholog is 100%.
Bootstrap support for D3B3U3 as seed ortholog is 100%.

Group of orthologs #712. Best score 139 bits
Score difference with first non-orthologous sequence - P.knowlesi:139 P.pallidum:139

B3L739              	100.00%		D3BEA4              	100.00%
Bootstrap support for B3L739 as seed ortholog is 100%.
Bootstrap support for D3BEA4 as seed ortholog is 100%.

Group of orthologs #713. Best score 139 bits
Score difference with first non-orthologous sequence - P.knowlesi:139 P.pallidum:139

B3L274              	100.00%		D3BLT5              	100.00%
Bootstrap support for B3L274 as seed ortholog is 100%.
Bootstrap support for D3BLT5 as seed ortholog is 100%.

Group of orthologs #714. Best score 139 bits
Score difference with first non-orthologous sequence - P.knowlesi:139 P.pallidum:139

B3LBJ5              	100.00%		D3BIP5              	100.00%
Bootstrap support for B3LBJ5 as seed ortholog is 100%.
Bootstrap support for D3BIP5 as seed ortholog is 100%.

Group of orthologs #715. Best score 138 bits
Score difference with first non-orthologous sequence - P.knowlesi:138 P.pallidum:138

B3L350              	100.00%		D3B6N8              	100.00%
Bootstrap support for B3L350 as seed ortholog is 100%.
Bootstrap support for D3B6N8 as seed ortholog is 100%.

Group of orthologs #716. Best score 138 bits
Score difference with first non-orthologous sequence - P.knowlesi:138 P.pallidum:138

B3L032              	100.00%		D3BDG0              	100.00%
Bootstrap support for B3L032 as seed ortholog is 100%.
Bootstrap support for D3BDG0 as seed ortholog is 100%.

Group of orthologs #717. Best score 138 bits
Score difference with first non-orthologous sequence - P.knowlesi:138 P.pallidum:138

B3L474              	100.00%		D3BHP3              	100.00%
Bootstrap support for B3L474 as seed ortholog is 100%.
Bootstrap support for D3BHP3 as seed ortholog is 100%.

Group of orthologs #718. Best score 138 bits
Score difference with first non-orthologous sequence - P.knowlesi:138 P.pallidum:26

B3LBJ3              	100.00%		D3BDR5              	100.00%
Bootstrap support for B3LBJ3 as seed ortholog is 100%.
Bootstrap support for D3BDR5 as seed ortholog is 83%.

Group of orthologs #719. Best score 137 bits
Score difference with first non-orthologous sequence - P.knowlesi:137 P.pallidum:137

B3L593              	100.00%		D3BCC1              	100.00%
Bootstrap support for B3L593 as seed ortholog is 100%.
Bootstrap support for D3BCC1 as seed ortholog is 100%.

Group of orthologs #720. Best score 136 bits
Score difference with first non-orthologous sequence - P.knowlesi:136 P.pallidum:136

B3LD50              	100.00%		D3B388              	100.00%
                    	       		D3AYB9              	10.79%
                    	       		D3BBL3              	6.35%
Bootstrap support for B3LD50 as seed ortholog is 100%.
Bootstrap support for D3B388 as seed ortholog is 100%.

Group of orthologs #721. Best score 136 bits
Score difference with first non-orthologous sequence - P.knowlesi:136 P.pallidum:136

B3L1D6              	100.00%		D3AWC6              	100.00%
Bootstrap support for B3L1D6 as seed ortholog is 100%.
Bootstrap support for D3AWC6 as seed ortholog is 100%.

Group of orthologs #722. Best score 136 bits
Score difference with first non-orthologous sequence - P.knowlesi:136 P.pallidum:136

B3LBB5              	100.00%		D3B1P5              	100.00%
Bootstrap support for B3LBB5 as seed ortholog is 100%.
Bootstrap support for D3B1P5 as seed ortholog is 100%.

Group of orthologs #723. Best score 136 bits
Score difference with first non-orthologous sequence - P.knowlesi:136 P.pallidum:136

B3L9R0              	100.00%		D3BLU5              	100.00%
Bootstrap support for B3L9R0 as seed ortholog is 100%.
Bootstrap support for D3BLU5 as seed ortholog is 100%.

Group of orthologs #724. Best score 136 bits
Score difference with first non-orthologous sequence - P.knowlesi:136 P.pallidum:136

B3L4M2              	100.00%		D3BT12              	100.00%
Bootstrap support for B3L4M2 as seed ortholog is 100%.
Bootstrap support for D3BT12 as seed ortholog is 100%.

Group of orthologs #725. Best score 136 bits
Score difference with first non-orthologous sequence - P.knowlesi:136 P.pallidum:136

B3LBC8              	100.00%		D3BNU2              	100.00%
Bootstrap support for B3LBC8 as seed ortholog is 100%.
Bootstrap support for D3BNU2 as seed ortholog is 100%.

Group of orthologs #726. Best score 136 bits
Score difference with first non-orthologous sequence - P.knowlesi:136 P.pallidum:136

B3L910              	100.00%		D3BSZ1              	100.00%
Bootstrap support for B3L910 as seed ortholog is 100%.
Bootstrap support for D3BSZ1 as seed ortholog is 100%.

Group of orthologs #727. Best score 135 bits
Score difference with first non-orthologous sequence - P.knowlesi:135 P.pallidum:58

B3KYX5              	100.00%		D3BHT1              	100.00%
Bootstrap support for B3KYX5 as seed ortholog is 100%.
Bootstrap support for D3BHT1 as seed ortholog is 99%.

Group of orthologs #728. Best score 135 bits
Score difference with first non-orthologous sequence - P.knowlesi:135 P.pallidum:135

B3L3C2              	100.00%		D3BEN2              	100.00%
Bootstrap support for B3L3C2 as seed ortholog is 100%.
Bootstrap support for D3BEN2 as seed ortholog is 100%.

Group of orthologs #729. Best score 135 bits
Score difference with first non-orthologous sequence - P.knowlesi:8 P.pallidum:135

B3LCN5              	100.00%		D3BE16              	100.00%
Bootstrap support for B3LCN5 as seed ortholog is 56%.
Alternative seed ortholog is B3LB23 (8 bits away from this cluster)
Bootstrap support for D3BE16 as seed ortholog is 100%.

Group of orthologs #730. Best score 135 bits
Score difference with first non-orthologous sequence - P.knowlesi:27 P.pallidum:9

B3L973              	100.00%		D3BM67              	100.00%
Bootstrap support for B3L973 as seed ortholog is 82%.
Bootstrap support for D3BM67 as seed ortholog is 61%.
Alternative seed ortholog is D3BPH9 (9 bits away from this cluster)

Group of orthologs #731. Best score 134 bits
Score difference with first non-orthologous sequence - P.knowlesi:134 P.pallidum:134

B3KZQ9              	100.00%		D3AWH9              	100.00%
Bootstrap support for B3KZQ9 as seed ortholog is 100%.
Bootstrap support for D3AWH9 as seed ortholog is 100%.

Group of orthologs #732. Best score 134 bits
Score difference with first non-orthologous sequence - P.knowlesi:134 P.pallidum:134

B3L470              	100.00%		D3AVM9              	100.00%
Bootstrap support for B3L470 as seed ortholog is 100%.
Bootstrap support for D3AVM9 as seed ortholog is 100%.

Group of orthologs #733. Best score 134 bits
Score difference with first non-orthologous sequence - P.knowlesi:134 P.pallidum:1

B3L2P6              	100.00%		D3B4B8              	100.00%
Bootstrap support for B3L2P6 as seed ortholog is 100%.
Bootstrap support for D3B4B8 as seed ortholog is 48%.
Alternative seed ortholog is D3BAQ8 (1 bits away from this cluster)

Group of orthologs #734. Best score 134 bits
Score difference with first non-orthologous sequence - P.knowlesi:134 P.pallidum:134

B3LCA1              	100.00%		D3AZP5              	100.00%
Bootstrap support for B3LCA1 as seed ortholog is 100%.
Bootstrap support for D3AZP5 as seed ortholog is 100%.

Group of orthologs #735. Best score 134 bits
Score difference with first non-orthologous sequence - P.knowlesi:134 P.pallidum:134

B3L3C1              	100.00%		D3B9D0              	100.00%
Bootstrap support for B3L3C1 as seed ortholog is 100%.
Bootstrap support for D3B9D0 as seed ortholog is 100%.

Group of orthologs #736. Best score 134 bits
Score difference with first non-orthologous sequence - P.knowlesi:134 P.pallidum:134

B3LAP4              	100.00%		D3B6B5              	100.00%
Bootstrap support for B3LAP4 as seed ortholog is 100%.
Bootstrap support for D3B6B5 as seed ortholog is 100%.

Group of orthologs #737. Best score 134 bits
Score difference with first non-orthologous sequence - P.knowlesi:80 P.pallidum:75

B3KZB4              	100.00%		D3BHT9              	100.00%
Bootstrap support for B3KZB4 as seed ortholog is 99%.
Bootstrap support for D3BHT9 as seed ortholog is 99%.

Group of orthologs #738. Best score 134 bits
Score difference with first non-orthologous sequence - P.knowlesi:134 P.pallidum:134

B3LAQ1              	100.00%		D3BKF5              	100.00%
Bootstrap support for B3LAQ1 as seed ortholog is 100%.
Bootstrap support for D3BKF5 as seed ortholog is 100%.

Group of orthologs #739. Best score 134 bits
Score difference with first non-orthologous sequence - P.knowlesi:134 P.pallidum:134

B3LCY5              	100.00%		D3BTJ6              	100.00%
Bootstrap support for B3LCY5 as seed ortholog is 100%.
Bootstrap support for D3BTJ6 as seed ortholog is 100%.

Group of orthologs #740. Best score 133 bits
Score difference with first non-orthologous sequence - P.knowlesi:133 P.pallidum:133

B3L6U9              	100.00%		D3B7B4              	100.00%
                    	       		D3B1M9              	23.68%
Bootstrap support for B3L6U9 as seed ortholog is 100%.
Bootstrap support for D3B7B4 as seed ortholog is 100%.

Group of orthologs #741. Best score 133 bits
Score difference with first non-orthologous sequence - P.knowlesi:133 P.pallidum:133

B3L1E5              	100.00%		D3AYN0              	100.00%
Bootstrap support for B3L1E5 as seed ortholog is 100%.
Bootstrap support for D3AYN0 as seed ortholog is 100%.

Group of orthologs #742. Best score 133 bits
Score difference with first non-orthologous sequence - P.knowlesi:133 P.pallidum:133

B3L1V2              	100.00%		D3AZM6              	100.00%
Bootstrap support for B3L1V2 as seed ortholog is 100%.
Bootstrap support for D3AZM6 as seed ortholog is 100%.

Group of orthologs #743. Best score 133 bits
Score difference with first non-orthologous sequence - P.knowlesi:133 P.pallidum:133

B3L1J7              	100.00%		D3B1R4              	100.00%
Bootstrap support for B3L1J7 as seed ortholog is 100%.
Bootstrap support for D3B1R4 as seed ortholog is 100%.

Group of orthologs #744. Best score 133 bits
Score difference with first non-orthologous sequence - P.knowlesi:133 P.pallidum:133

B3L8R3              	100.00%		D3BCB9              	100.00%
Bootstrap support for B3L8R3 as seed ortholog is 100%.
Bootstrap support for D3BCB9 as seed ortholog is 100%.

Group of orthologs #745. Best score 133 bits
Score difference with first non-orthologous sequence - P.knowlesi:133 P.pallidum:133

B3L687              	100.00%		D3BF71              	100.00%
Bootstrap support for B3L687 as seed ortholog is 100%.
Bootstrap support for D3BF71 as seed ortholog is 100%.

Group of orthologs #746. Best score 133 bits
Score difference with first non-orthologous sequence - P.knowlesi:133 P.pallidum:133

B3L600              	100.00%		D3BI06              	100.00%
Bootstrap support for B3L600 as seed ortholog is 100%.
Bootstrap support for D3BI06 as seed ortholog is 100%.

Group of orthologs #747. Best score 133 bits
Score difference with first non-orthologous sequence - P.knowlesi:73 P.pallidum:51

B3L543              	100.00%		D3BJB1              	100.00%
Bootstrap support for B3L543 as seed ortholog is 100%.
Bootstrap support for D3BJB1 as seed ortholog is 99%.

Group of orthologs #748. Best score 133 bits
Score difference with first non-orthologous sequence - P.knowlesi:133 P.pallidum:133

B3LBE7              	100.00%		D3BGE0              	100.00%
Bootstrap support for B3LBE7 as seed ortholog is 100%.
Bootstrap support for D3BGE0 as seed ortholog is 100%.

Group of orthologs #749. Best score 133 bits
Score difference with first non-orthologous sequence - P.knowlesi:41 P.pallidum:133

B3L324              	100.00%		D3BQD0              	100.00%
Bootstrap support for B3L324 as seed ortholog is 97%.
Bootstrap support for D3BQD0 as seed ortholog is 100%.

Group of orthologs #750. Best score 133 bits
Score difference with first non-orthologous sequence - P.knowlesi:133 P.pallidum:133

B3L4W5              	100.00%		D3BPW7              	100.00%
Bootstrap support for B3L4W5 as seed ortholog is 100%.
Bootstrap support for D3BPW7 as seed ortholog is 100%.

Group of orthologs #751. Best score 133 bits
Score difference with first non-orthologous sequence - P.knowlesi:133 P.pallidum:133

B3L4N5              	100.00%		D3BQQ8              	100.00%
Bootstrap support for B3L4N5 as seed ortholog is 100%.
Bootstrap support for D3BQQ8 as seed ortholog is 100%.

Group of orthologs #752. Best score 133 bits
Score difference with first non-orthologous sequence - P.knowlesi:133 P.pallidum:133

B3L5Q7              	100.00%		D3BT18              	100.00%
Bootstrap support for B3L5Q7 as seed ortholog is 100%.
Bootstrap support for D3BT18 as seed ortholog is 100%.

Group of orthologs #753. Best score 133 bits
Score difference with first non-orthologous sequence - P.knowlesi:133 P.pallidum:133

B3LBS5              	100.00%		D3BSK0              	100.00%
Bootstrap support for B3LBS5 as seed ortholog is 100%.
Bootstrap support for D3BSK0 as seed ortholog is 100%.

Group of orthologs #754. Best score 132 bits
Score difference with first non-orthologous sequence - P.knowlesi:55 P.pallidum:132

B3L9Z2              	100.00%		D3B081              	100.00%
Bootstrap support for B3L9Z2 as seed ortholog is 97%.
Bootstrap support for D3B081 as seed ortholog is 100%.

Group of orthologs #755. Best score 132 bits
Score difference with first non-orthologous sequence - P.knowlesi:132 P.pallidum:132

B3LC94              	100.00%		D3B3U2              	100.00%
Bootstrap support for B3LC94 as seed ortholog is 100%.
Bootstrap support for D3B3U2 as seed ortholog is 100%.

Group of orthologs #756. Best score 131 bits
Score difference with first non-orthologous sequence - P.knowlesi:131 P.pallidum:131

B3LCF3              	100.00%		D3B2C2              	100.00%
Bootstrap support for B3LCF3 as seed ortholog is 100%.
Bootstrap support for D3B2C2 as seed ortholog is 100%.

Group of orthologs #757. Best score 131 bits
Score difference with first non-orthologous sequence - P.knowlesi:131 P.pallidum:131

B3L1X8              	100.00%		D3BNU0              	100.00%
Bootstrap support for B3L1X8 as seed ortholog is 100%.
Bootstrap support for D3BNU0 as seed ortholog is 100%.

Group of orthologs #758. Best score 131 bits
Score difference with first non-orthologous sequence - P.knowlesi:131 P.pallidum:131

B3L5M8              	100.00%		D3BUX6              	100.00%
Bootstrap support for B3L5M8 as seed ortholog is 100%.
Bootstrap support for D3BUX6 as seed ortholog is 100%.

Group of orthologs #759. Best score 131 bits
Score difference with first non-orthologous sequence - P.knowlesi:131 P.pallidum:131

B3LCY6              	100.00%		D3BQD4              	100.00%
Bootstrap support for B3LCY6 as seed ortholog is 100%.
Bootstrap support for D3BQD4 as seed ortholog is 100%.

Group of orthologs #760. Best score 131 bits
Score difference with first non-orthologous sequence - P.knowlesi:131 P.pallidum:131

B3LCN8              	100.00%		D3BTS9              	100.00%
Bootstrap support for B3LCN8 as seed ortholog is 100%.
Bootstrap support for D3BTS9 as seed ortholog is 100%.

Group of orthologs #761. Best score 130 bits
Score difference with first non-orthologous sequence - P.knowlesi:130 P.pallidum:130

B3KZ28              	100.00%		D3AWF3              	100.00%
Bootstrap support for B3KZ28 as seed ortholog is 100%.
Bootstrap support for D3AWF3 as seed ortholog is 100%.

Group of orthologs #762. Best score 130 bits
Score difference with first non-orthologous sequence - P.knowlesi:130 P.pallidum:130

B3LC67              	100.00%		D3AW01              	100.00%
Bootstrap support for B3LC67 as seed ortholog is 100%.
Bootstrap support for D3AW01 as seed ortholog is 100%.

Group of orthologs #763. Best score 130 bits
Score difference with first non-orthologous sequence - P.knowlesi:130 P.pallidum:130

B3L418              	100.00%		D3BGC7              	100.00%
Bootstrap support for B3L418 as seed ortholog is 100%.
Bootstrap support for D3BGC7 as seed ortholog is 100%.

Group of orthologs #764. Best score 129 bits
Score difference with first non-orthologous sequence - P.knowlesi:129 P.pallidum:129

B3L596              	100.00%		D3B3A9              	100.00%
Bootstrap support for B3L596 as seed ortholog is 100%.
Bootstrap support for D3B3A9 as seed ortholog is 100%.

Group of orthologs #765. Best score 129 bits
Score difference with first non-orthologous sequence - P.knowlesi:129 P.pallidum:129

B3LA20              	100.00%		D3B334              	100.00%
Bootstrap support for B3LA20 as seed ortholog is 100%.
Bootstrap support for D3B334 as seed ortholog is 100%.

Group of orthologs #766. Best score 129 bits
Score difference with first non-orthologous sequence - P.knowlesi:129 P.pallidum:129

B3L608              	100.00%		D3BB60              	100.00%
Bootstrap support for B3L608 as seed ortholog is 100%.
Bootstrap support for D3BB60 as seed ortholog is 100%.

Group of orthologs #767. Best score 129 bits
Score difference with first non-orthologous sequence - P.knowlesi:129 P.pallidum:35

B3LB63              	100.00%		D3B614              	100.00%
Bootstrap support for B3LB63 as seed ortholog is 100%.
Bootstrap support for D3B614 as seed ortholog is 76%.

Group of orthologs #768. Best score 129 bits
Score difference with first non-orthologous sequence - P.knowlesi:129 P.pallidum:129

B3L5J4              	100.00%		D3BT25              	100.00%
Bootstrap support for B3L5J4 as seed ortholog is 100%.
Bootstrap support for D3BT25 as seed ortholog is 100%.

Group of orthologs #769. Best score 128 bits
Score difference with first non-orthologous sequence - P.knowlesi:128 P.pallidum:128

B3LD88              	100.00%		D3AW96              	100.00%
Bootstrap support for B3LD88 as seed ortholog is 100%.
Bootstrap support for D3AW96 as seed ortholog is 100%.

Group of orthologs #770. Best score 128 bits
Score difference with first non-orthologous sequence - P.knowlesi:128 P.pallidum:128

B3L3Z2              	100.00%		D3BCX0              	100.00%
Bootstrap support for B3L3Z2 as seed ortholog is 100%.
Bootstrap support for D3BCX0 as seed ortholog is 100%.

Group of orthologs #771. Best score 128 bits
Score difference with first non-orthologous sequence - P.knowlesi:59 P.pallidum:128

B3LC84              	100.00%		D3BCY5              	100.00%
Bootstrap support for B3LC84 as seed ortholog is 45%.
Alternative seed ortholog is B3L575 (59 bits away from this cluster)
Bootstrap support for D3BCY5 as seed ortholog is 100%.

Group of orthologs #772. Best score 127 bits
Score difference with first non-orthologous sequence - P.knowlesi:127 P.pallidum:127

B3L420              	100.00%		D3AVZ9              	100.00%
Bootstrap support for B3L420 as seed ortholog is 100%.
Bootstrap support for D3AVZ9 as seed ortholog is 100%.

Group of orthologs #773. Best score 127 bits
Score difference with first non-orthologous sequence - P.knowlesi:127 P.pallidum:127

B3L387              	100.00%		D3B477              	100.00%
Bootstrap support for B3L387 as seed ortholog is 100%.
Bootstrap support for D3B477 as seed ortholog is 100%.

Group of orthologs #774. Best score 127 bits
Score difference with first non-orthologous sequence - P.knowlesi:127 P.pallidum:127

B3L372              	100.00%		D3BNY3              	100.00%
Bootstrap support for B3L372 as seed ortholog is 100%.
Bootstrap support for D3BNY3 as seed ortholog is 100%.

Group of orthologs #775. Best score 127 bits
Score difference with first non-orthologous sequence - P.knowlesi:127 P.pallidum:127

B3L551              	100.00%		D3BP66              	100.00%
Bootstrap support for B3L551 as seed ortholog is 100%.
Bootstrap support for D3BP66 as seed ortholog is 100%.

Group of orthologs #776. Best score 126 bits
Score difference with first non-orthologous sequence - P.knowlesi:126 P.pallidum:126

B3L6Y9              	100.00%		D3B3N7              	100.00%
                    	       		D3B7G1              	27.74%
Bootstrap support for B3L6Y9 as seed ortholog is 100%.
Bootstrap support for D3B3N7 as seed ortholog is 100%.

Group of orthologs #777. Best score 126 bits
Score difference with first non-orthologous sequence - P.knowlesi:126 P.pallidum:126

B3L5K5              	100.00%		D3AZF8              	100.00%
Bootstrap support for B3L5K5 as seed ortholog is 100%.
Bootstrap support for D3AZF8 as seed ortholog is 100%.

Group of orthologs #778. Best score 126 bits
Score difference with first non-orthologous sequence - P.knowlesi:126 P.pallidum:126

B3KZ07              	100.00%		D3BCF9              	100.00%
Bootstrap support for B3KZ07 as seed ortholog is 100%.
Bootstrap support for D3BCF9 as seed ortholog is 100%.

Group of orthologs #779. Best score 126 bits
Score difference with first non-orthologous sequence - P.knowlesi:126 P.pallidum:126

B3L1K6              	100.00%		D3BAR1              	100.00%
Bootstrap support for B3L1K6 as seed ortholog is 100%.
Bootstrap support for D3BAR1 as seed ortholog is 100%.

Group of orthologs #780. Best score 126 bits
Score difference with first non-orthologous sequence - P.knowlesi:126 P.pallidum:126

B3L7Z7              	100.00%		D3B6N1              	100.00%
Bootstrap support for B3L7Z7 as seed ortholog is 100%.
Bootstrap support for D3B6N1 as seed ortholog is 100%.

Group of orthologs #781. Best score 126 bits
Score difference with first non-orthologous sequence - P.knowlesi:126 P.pallidum:126

B3L0Q3              	100.00%		D3BIL1              	100.00%
Bootstrap support for B3L0Q3 as seed ortholog is 100%.
Bootstrap support for D3BIL1 as seed ortholog is 100%.

Group of orthologs #782. Best score 126 bits
Score difference with first non-orthologous sequence - P.knowlesi:126 P.pallidum:126

B3KZA1              	100.00%		D3BK33              	100.00%
Bootstrap support for B3KZA1 as seed ortholog is 100%.
Bootstrap support for D3BK33 as seed ortholog is 100%.

Group of orthologs #783. Best score 126 bits
Score difference with first non-orthologous sequence - P.knowlesi:22 P.pallidum:126

B3L2C7              	100.00%		D3BSQ1              	100.00%
Bootstrap support for B3L2C7 as seed ortholog is 82%.
Bootstrap support for D3BSQ1 as seed ortholog is 100%.

Group of orthologs #784. Best score 126 bits
Score difference with first non-orthologous sequence - P.knowlesi:59 P.pallidum:126

B3L198              	100.00%		D3BV23              	100.00%
Bootstrap support for B3L198 as seed ortholog is 97%.
Bootstrap support for D3BV23 as seed ortholog is 100%.

Group of orthologs #785. Best score 126 bits
Score difference with first non-orthologous sequence - P.knowlesi:126 P.pallidum:126

B3L743              	100.00%		D3BTD9              	100.00%
Bootstrap support for B3L743 as seed ortholog is 100%.
Bootstrap support for D3BTD9 as seed ortholog is 100%.

Group of orthologs #786. Best score 126 bits
Score difference with first non-orthologous sequence - P.knowlesi:126 P.pallidum:126

B3L937              	100.00%		D3BS88              	100.00%
Bootstrap support for B3L937 as seed ortholog is 100%.
Bootstrap support for D3BS88 as seed ortholog is 100%.

Group of orthologs #787. Best score 125 bits
Score difference with first non-orthologous sequence - P.knowlesi:125 P.pallidum:125

B3L7C1              	100.00%		D3B4R5              	100.00%
Bootstrap support for B3L7C1 as seed ortholog is 100%.
Bootstrap support for D3B4R5 as seed ortholog is 100%.

Group of orthologs #788. Best score 124 bits
Score difference with first non-orthologous sequence - P.knowlesi:124 P.pallidum:124

B3LDC2              	100.00%		D3AYG6              	100.00%
                    	       		D3BQK6              	10.43%
Bootstrap support for B3LDC2 as seed ortholog is 100%.
Bootstrap support for D3AYG6 as seed ortholog is 100%.

Group of orthologs #789. Best score 124 bits
Score difference with first non-orthologous sequence - P.knowlesi:124 P.pallidum:124

B3LCE1              	100.00%		D3AY36              	100.00%
Bootstrap support for B3LCE1 as seed ortholog is 100%.
Bootstrap support for D3AY36 as seed ortholog is 100%.

Group of orthologs #790. Best score 124 bits
Score difference with first non-orthologous sequence - P.knowlesi:65 P.pallidum:5

B3LAE7              	100.00%		D3BEV0              	100.00%
Bootstrap support for B3LAE7 as seed ortholog is 98%.
Bootstrap support for D3BEV0 as seed ortholog is 59%.
Alternative seed ortholog is D3BIF0 (5 bits away from this cluster)

Group of orthologs #791. Best score 124 bits
Score difference with first non-orthologous sequence - P.knowlesi:124 P.pallidum:51

B3L8G2              	100.00%		D3BH70              	100.00%
Bootstrap support for B3L8G2 as seed ortholog is 100%.
Bootstrap support for D3BH70 as seed ortholog is 69%.
Alternative seed ortholog is D3BSC8 (51 bits away from this cluster)

Group of orthologs #792. Best score 124 bits
Score difference with first non-orthologous sequence - P.knowlesi:124 P.pallidum:124

B3L720              	100.00%		D3BQZ1              	100.00%
Bootstrap support for B3L720 as seed ortholog is 100%.
Bootstrap support for D3BQZ1 as seed ortholog is 100%.

Group of orthologs #793. Best score 124 bits
Score difference with first non-orthologous sequence - P.knowlesi:124 P.pallidum:124

B3LD34              	100.00%		D3BM58              	100.00%
Bootstrap support for B3LD34 as seed ortholog is 100%.
Bootstrap support for D3BM58 as seed ortholog is 100%.

Group of orthologs #794. Best score 123 bits
Score difference with first non-orthologous sequence - P.knowlesi:123 P.pallidum:123

B3KZG4              	100.00%		D3B3B6              	100.00%
Bootstrap support for B3KZG4 as seed ortholog is 100%.
Bootstrap support for D3B3B6 as seed ortholog is 100%.

Group of orthologs #795. Best score 123 bits
Score difference with first non-orthologous sequence - P.knowlesi:123 P.pallidum:82

B3L0C4              	100.00%		D3B6E4              	100.00%
Bootstrap support for B3L0C4 as seed ortholog is 100%.
Bootstrap support for D3B6E4 as seed ortholog is 99%.

Group of orthologs #796. Best score 123 bits
Score difference with first non-orthologous sequence - P.knowlesi:123 P.pallidum:123

B3L7D2              	100.00%		D3BB72              	100.00%
Bootstrap support for B3L7D2 as seed ortholog is 100%.
Bootstrap support for D3BB72 as seed ortholog is 100%.

Group of orthologs #797. Best score 122 bits
Score difference with first non-orthologous sequence - P.knowlesi:122 P.pallidum:122

B3L6A8              	100.00%		D3B9P3              	100.00%
                    	       		D3B3T2              	12.69%
                    	       		D3BKY3              	8.12%
Bootstrap support for B3L6A8 as seed ortholog is 100%.
Bootstrap support for D3B9P3 as seed ortholog is 100%.

Group of orthologs #798. Best score 122 bits
Score difference with first non-orthologous sequence - P.knowlesi:122 P.pallidum:122

B3L560              	100.00%		D3AWE0              	100.00%
Bootstrap support for B3L560 as seed ortholog is 100%.
Bootstrap support for D3AWE0 as seed ortholog is 100%.

Group of orthologs #799. Best score 122 bits
Score difference with first non-orthologous sequence - P.knowlesi:122 P.pallidum:122

B3LBI9              	100.00%		D3B963              	100.00%
Bootstrap support for B3LBI9 as seed ortholog is 100%.
Bootstrap support for D3B963 as seed ortholog is 100%.

Group of orthologs #800. Best score 121 bits
Score difference with first non-orthologous sequence - P.knowlesi:121 P.pallidum:121

B3L3N5              	100.00%		D3B194              	100.00%
Bootstrap support for B3L3N5 as seed ortholog is 100%.
Bootstrap support for D3B194 as seed ortholog is 100%.

Group of orthologs #801. Best score 121 bits
Score difference with first non-orthologous sequence - P.knowlesi:42 P.pallidum:66

B3L7K1              	100.00%		D3BCF1              	100.00%
Bootstrap support for B3L7K1 as seed ortholog is 84%.
Bootstrap support for D3BCF1 as seed ortholog is 92%.

Group of orthologs #802. Best score 121 bits
Score difference with first non-orthologous sequence - P.knowlesi:121 P.pallidum:121

B3L2S4              	100.00%		D3BLR1              	100.00%
Bootstrap support for B3L2S4 as seed ortholog is 100%.
Bootstrap support for D3BLR1 as seed ortholog is 100%.

Group of orthologs #803. Best score 120 bits
Score difference with first non-orthologous sequence - P.knowlesi:120 P.pallidum:120

B3LD96              	100.00%		D3AXK2              	100.00%
Bootstrap support for B3LD96 as seed ortholog is 100%.
Bootstrap support for D3AXK2 as seed ortholog is 100%.

Group of orthologs #804. Best score 120 bits
Score difference with first non-orthologous sequence - P.knowlesi:120 P.pallidum:120

B3L8W9              	100.00%		D3B9E9              	100.00%
Bootstrap support for B3L8W9 as seed ortholog is 100%.
Bootstrap support for D3B9E9 as seed ortholog is 100%.

Group of orthologs #805. Best score 119 bits
Score difference with first non-orthologous sequence - P.knowlesi:119 P.pallidum:119

B3L1V7              	100.00%		D3BH99              	100.00%
                    	       		D3B1C3              	17.19%
Bootstrap support for B3L1V7 as seed ortholog is 100%.
Bootstrap support for D3BH99 as seed ortholog is 100%.

Group of orthologs #806. Best score 119 bits
Score difference with first non-orthologous sequence - P.knowlesi:119 P.pallidum:67

B3L2U1              	100.00%		D3B636              	100.00%
Bootstrap support for B3L2U1 as seed ortholog is 100%.
Bootstrap support for D3B636 as seed ortholog is 98%.

Group of orthologs #807. Best score 119 bits
Score difference with first non-orthologous sequence - P.knowlesi:43 P.pallidum:119

B3LAW9              	100.00%		D3B0E6              	100.00%
Bootstrap support for B3LAW9 as seed ortholog is 98%.
Bootstrap support for D3B0E6 as seed ortholog is 100%.

Group of orthologs #808. Best score 119 bits
Score difference with first non-orthologous sequence - P.knowlesi:119 P.pallidum:119

B3L0H5              	100.00%		D3BBQ4              	100.00%
Bootstrap support for B3L0H5 as seed ortholog is 100%.
Bootstrap support for D3BBQ4 as seed ortholog is 100%.

Group of orthologs #809. Best score 119 bits
Score difference with first non-orthologous sequence - P.knowlesi:119 P.pallidum:119

B3L8M1              	100.00%		D3B895              	100.00%
Bootstrap support for B3L8M1 as seed ortholog is 100%.
Bootstrap support for D3B895 as seed ortholog is 100%.

Group of orthologs #810. Best score 119 bits
Score difference with first non-orthologous sequence - P.knowlesi:119 P.pallidum:119

B3L2W0              	100.00%		D3BEZ0              	100.00%
Bootstrap support for B3L2W0 as seed ortholog is 100%.
Bootstrap support for D3BEZ0 as seed ortholog is 100%.

Group of orthologs #811. Best score 119 bits
Score difference with first non-orthologous sequence - P.knowlesi:119 P.pallidum:119

B3L8J3              	100.00%		D3BAJ3              	100.00%
Bootstrap support for B3L8J3 as seed ortholog is 100%.
Bootstrap support for D3BAJ3 as seed ortholog is 100%.

Group of orthologs #812. Best score 119 bits
Score difference with first non-orthologous sequence - P.knowlesi:119 P.pallidum:119

B3L488              	100.00%		D3BGR2              	100.00%
Bootstrap support for B3L488 as seed ortholog is 100%.
Bootstrap support for D3BGR2 as seed ortholog is 100%.

Group of orthologs #813. Best score 119 bits
Score difference with first non-orthologous sequence - P.knowlesi:119 P.pallidum:27

B3L5Q0              	100.00%		D3BLM4              	100.00%
Bootstrap support for B3L5Q0 as seed ortholog is 100%.
Bootstrap support for D3BLM4 as seed ortholog is 81%.

Group of orthologs #814. Best score 119 bits
Score difference with first non-orthologous sequence - P.knowlesi:66 P.pallidum:55

B3L4D9              	100.00%		D3BR70              	100.00%
Bootstrap support for B3L4D9 as seed ortholog is 99%.
Bootstrap support for D3BR70 as seed ortholog is 98%.

Group of orthologs #815. Best score 119 bits
Score difference with first non-orthologous sequence - P.knowlesi:67 P.pallidum:119

B3L1H3              	100.00%		D3BUN5              	100.00%
Bootstrap support for B3L1H3 as seed ortholog is 99%.
Bootstrap support for D3BUN5 as seed ortholog is 100%.

Group of orthologs #816. Best score 119 bits
Score difference with first non-orthologous sequence - P.knowlesi:119 P.pallidum:119

B3L8G7              	100.00%		D3BNV1              	100.00%
Bootstrap support for B3L8G7 as seed ortholog is 100%.
Bootstrap support for D3BNV1 as seed ortholog is 100%.

Group of orthologs #817. Best score 118 bits
Score difference with first non-orthologous sequence - P.knowlesi:49 P.pallidum:118

B3L1B3              	100.00%		D3BCC3              	100.00%
Bootstrap support for B3L1B3 as seed ortholog is 92%.
Bootstrap support for D3BCC3 as seed ortholog is 100%.

Group of orthologs #818. Best score 118 bits
Score difference with first non-orthologous sequence - P.knowlesi:118 P.pallidum:118

B3L386              	100.00%		D3BBT7              	100.00%
Bootstrap support for B3L386 as seed ortholog is 100%.
Bootstrap support for D3BBT7 as seed ortholog is 100%.

Group of orthologs #819. Best score 118 bits
Score difference with first non-orthologous sequence - P.knowlesi:118 P.pallidum:118

B3LAY3              	100.00%		D3BB06              	100.00%
Bootstrap support for B3LAY3 as seed ortholog is 100%.
Bootstrap support for D3BB06 as seed ortholog is 100%.

Group of orthologs #820. Best score 118 bits
Score difference with first non-orthologous sequence - P.knowlesi:118 P.pallidum:118

B3L994              	100.00%		D3BH65              	100.00%
Bootstrap support for B3L994 as seed ortholog is 100%.
Bootstrap support for D3BH65 as seed ortholog is 100%.

Group of orthologs #821. Best score 118 bits
Score difference with first non-orthologous sequence - P.knowlesi:118 P.pallidum:118

B3L9P0              	100.00%		D3BVK2              	100.00%
Bootstrap support for B3L9P0 as seed ortholog is 100%.
Bootstrap support for D3BVK2 as seed ortholog is 100%.

Group of orthologs #822. Best score 117 bits
Score difference with first non-orthologous sequence - P.knowlesi:117 P.pallidum:117

B3L5Z9              	100.00%		D3AXI5              	100.00%
Bootstrap support for B3L5Z9 as seed ortholog is 100%.
Bootstrap support for D3AXI5 as seed ortholog is 100%.

Group of orthologs #823. Best score 117 bits
Score difference with first non-orthologous sequence - P.knowlesi:117 P.pallidum:117

B3LBX3              	100.00%		D3BPL5              	100.00%
Bootstrap support for B3LBX3 as seed ortholog is 100%.
Bootstrap support for D3BPL5 as seed ortholog is 100%.

Group of orthologs #824. Best score 116 bits
Score difference with first non-orthologous sequence - P.knowlesi:116 P.pallidum:39

B3L9Y7              	100.00%		D3BKK8              	100.00%
                    	       		D3BI36              	11.27%
                    	       		D3BVD2              	8.11%
                    	       		D3B103              	7.79%
                    	       		D3B8P4              	5.89%
Bootstrap support for B3L9Y7 as seed ortholog is 100%.
Bootstrap support for D3BKK8 as seed ortholog is 73%.
Alternative seed ortholog is D3BQC1 (39 bits away from this cluster)

Group of orthologs #825. Best score 116 bits
Score difference with first non-orthologous sequence - P.knowlesi:116 P.pallidum:63

B3KZ68              	100.00%		D3B1A8              	100.00%
Bootstrap support for B3KZ68 as seed ortholog is 100%.
Bootstrap support for D3B1A8 as seed ortholog is 99%.

Group of orthologs #826. Best score 116 bits
Score difference with first non-orthologous sequence - P.knowlesi:116 P.pallidum:116

B3L3G6              	100.00%		D3B9Y5              	100.00%
Bootstrap support for B3L3G6 as seed ortholog is 100%.
Bootstrap support for D3B9Y5 as seed ortholog is 100%.

Group of orthologs #827. Best score 116 bits
Score difference with first non-orthologous sequence - P.knowlesi:44 P.pallidum:53

B3L5I2              	100.00%		D3BAK7              	100.00%
Bootstrap support for B3L5I2 as seed ortholog is 74%.
Alternative seed ortholog is B3L758 (44 bits away from this cluster)
Bootstrap support for D3BAK7 as seed ortholog is 90%.

Group of orthologs #828. Best score 116 bits
Score difference with first non-orthologous sequence - P.knowlesi:116 P.pallidum:116

B3LDD9              	100.00%		D3B7H9              	100.00%
Bootstrap support for B3LDD9 as seed ortholog is 100%.
Bootstrap support for D3B7H9 as seed ortholog is 100%.

Group of orthologs #829. Best score 116 bits
Score difference with first non-orthologous sequence - P.knowlesi:116 P.pallidum:116

B3KZH0              	100.00%		D3BMU1              	100.00%
Bootstrap support for B3KZH0 as seed ortholog is 100%.
Bootstrap support for D3BMU1 as seed ortholog is 100%.

Group of orthologs #830. Best score 116 bits
Score difference with first non-orthologous sequence - P.knowlesi:116 P.pallidum:4

B3L5T1              	100.00%		D3BJS3              	100.00%
Bootstrap support for B3L5T1 as seed ortholog is 100%.
Bootstrap support for D3BJS3 as seed ortholog is 62%.
Alternative seed ortholog is D3BQC1 (4 bits away from this cluster)

Group of orthologs #831. Best score 115 bits
Score difference with first non-orthologous sequence - P.knowlesi:51 P.pallidum:38

B3L152              	100.00%		D3BUR4              	100.00%
Bootstrap support for B3L152 as seed ortholog is 97%.
Bootstrap support for D3BUR4 as seed ortholog is 83%.

Group of orthologs #832. Best score 114 bits
Score difference with first non-orthologous sequence - P.knowlesi:114 P.pallidum:114

B3KZP5              	100.00%		D3AY99              	100.00%
Bootstrap support for B3KZP5 as seed ortholog is 100%.
Bootstrap support for D3AY99 as seed ortholog is 100%.

Group of orthologs #833. Best score 114 bits
Score difference with first non-orthologous sequence - P.knowlesi:114 P.pallidum:114

B3L671              	100.00%		D3BM86              	100.00%
Bootstrap support for B3L671 as seed ortholog is 100%.
Bootstrap support for D3BM86 as seed ortholog is 100%.

Group of orthologs #834. Best score 114 bits
Score difference with first non-orthologous sequence - P.knowlesi:114 P.pallidum:114

B3L5P4              	100.00%		D3BMU4              	100.00%
Bootstrap support for B3L5P4 as seed ortholog is 100%.
Bootstrap support for D3BMU4 as seed ortholog is 100%.

Group of orthologs #835. Best score 114 bits
Score difference with first non-orthologous sequence - P.knowlesi:114 P.pallidum:114

B3L9H4              	100.00%		D3BM02              	100.00%
Bootstrap support for B3L9H4 as seed ortholog is 100%.
Bootstrap support for D3BM02 as seed ortholog is 100%.

Group of orthologs #836. Best score 114 bits
Score difference with first non-orthologous sequence - P.knowlesi:114 P.pallidum:114

B3LAD1              	100.00%		D3BTW0              	100.00%
Bootstrap support for B3LAD1 as seed ortholog is 100%.
Bootstrap support for D3BTW0 as seed ortholog is 100%.

Group of orthologs #837. Best score 113 bits
Score difference with first non-orthologous sequence - P.knowlesi:113 P.pallidum:113

B3LAJ7              	100.00%		D3BMK7              	100.00%
                    	       		D3B2D5              	47.73%
Bootstrap support for B3LAJ7 as seed ortholog is 100%.
Bootstrap support for D3BMK7 as seed ortholog is 100%.

Group of orthologs #838. Best score 113 bits
Score difference with first non-orthologous sequence - P.knowlesi:113 P.pallidum:113

B3L8P9              	100.00%		D3B2R4              	100.00%
Bootstrap support for B3L8P9 as seed ortholog is 100%.
Bootstrap support for D3B2R4 as seed ortholog is 100%.

Group of orthologs #839. Best score 113 bits
Score difference with first non-orthologous sequence - P.knowlesi:113 P.pallidum:113

B3L4C6              	100.00%		D3BD80              	100.00%
Bootstrap support for B3L4C6 as seed ortholog is 100%.
Bootstrap support for D3BD80 as seed ortholog is 100%.

Group of orthologs #840. Best score 113 bits
Score difference with first non-orthologous sequence - P.knowlesi:113 P.pallidum:113

B3L8M6              	100.00%		D3BAW8              	100.00%
Bootstrap support for B3L8M6 as seed ortholog is 100%.
Bootstrap support for D3BAW8 as seed ortholog is 100%.

Group of orthologs #841. Best score 113 bits
Score difference with first non-orthologous sequence - P.knowlesi:113 P.pallidum:113

B3L6Q7              	100.00%		D3BKL0              	100.00%
Bootstrap support for B3L6Q7 as seed ortholog is 100%.
Bootstrap support for D3BKL0 as seed ortholog is 100%.

Group of orthologs #842. Best score 113 bits
Score difference with first non-orthologous sequence - P.knowlesi:113 P.pallidum:113

B3L9S3              	100.00%		D3BHM0              	100.00%
Bootstrap support for B3L9S3 as seed ortholog is 100%.
Bootstrap support for D3BHM0 as seed ortholog is 100%.

Group of orthologs #843. Best score 113 bits
Score difference with first non-orthologous sequence - P.knowlesi:113 P.pallidum:113

B3LAU1              	100.00%		D3BMI1              	100.00%
Bootstrap support for B3LAU1 as seed ortholog is 100%.
Bootstrap support for D3BMI1 as seed ortholog is 100%.

Group of orthologs #844. Best score 112 bits
Score difference with first non-orthologous sequence - P.knowlesi:112 P.pallidum:112

B3LBQ4              	100.00%		D3AYE0              	100.00%
B3LCA6              	6.28%		
Bootstrap support for B3LBQ4 as seed ortholog is 100%.
Bootstrap support for D3AYE0 as seed ortholog is 100%.

Group of orthologs #845. Best score 112 bits
Score difference with first non-orthologous sequence - P.knowlesi:112 P.pallidum:112

B3L662              	100.00%		D3B044              	100.00%
Bootstrap support for B3L662 as seed ortholog is 100%.
Bootstrap support for D3B044 as seed ortholog is 100%.

Group of orthologs #846. Best score 112 bits
Score difference with first non-orthologous sequence - P.knowlesi:112 P.pallidum:112

B3L7P2              	100.00%		D3AZY2              	100.00%
Bootstrap support for B3L7P2 as seed ortholog is 100%.
Bootstrap support for D3AZY2 as seed ortholog is 100%.

Group of orthologs #847. Best score 112 bits
Score difference with first non-orthologous sequence - P.knowlesi:112 P.pallidum:57

B3LBT5              	100.00%		D3B3D4              	100.00%
Bootstrap support for B3LBT5 as seed ortholog is 100%.
Bootstrap support for D3B3D4 as seed ortholog is 94%.

Group of orthologs #848. Best score 112 bits
Score difference with first non-orthologous sequence - P.knowlesi:112 P.pallidum:112

B3LCD2              	100.00%		D3BU56              	100.00%
Bootstrap support for B3LCD2 as seed ortholog is 100%.
Bootstrap support for D3BU56 as seed ortholog is 100%.

Group of orthologs #849. Best score 111 bits
Score difference with first non-orthologous sequence - P.knowlesi:111 P.pallidum:111

B3L6I3              	100.00%		D3B165              	100.00%
Bootstrap support for B3L6I3 as seed ortholog is 100%.
Bootstrap support for D3B165 as seed ortholog is 100%.

Group of orthologs #850. Best score 111 bits
Score difference with first non-orthologous sequence - P.knowlesi:111 P.pallidum:59

B3L2K1              	100.00%		D3B645              	100.00%
Bootstrap support for B3L2K1 as seed ortholog is 100%.
Bootstrap support for D3B645 as seed ortholog is 92%.

Group of orthologs #851. Best score 111 bits
Score difference with first non-orthologous sequence - P.knowlesi:111 P.pallidum:111

B3L7N0              	100.00%		D3BTM8              	100.00%
Bootstrap support for B3L7N0 as seed ortholog is 100%.
Bootstrap support for D3BTM8 as seed ortholog is 100%.

Group of orthologs #852. Best score 110 bits
Score difference with first non-orthologous sequence - P.knowlesi:110 P.pallidum:45

B3L8X2              	100.00%		D3BIZ5              	100.00%
                    	       		D3AVM4              	6.98%
Bootstrap support for B3L8X2 as seed ortholog is 100%.
Bootstrap support for D3BIZ5 as seed ortholog is 90%.

Group of orthologs #853. Best score 110 bits
Score difference with first non-orthologous sequence - P.knowlesi:110 P.pallidum:110

B3L404              	100.00%		D3BAX8              	100.00%
Bootstrap support for B3L404 as seed ortholog is 100%.
Bootstrap support for D3BAX8 as seed ortholog is 100%.

Group of orthologs #854. Best score 110 bits
Score difference with first non-orthologous sequence - P.knowlesi:110 P.pallidum:110

B3L9X9              	100.00%		D3BKF7              	100.00%
Bootstrap support for B3L9X9 as seed ortholog is 100%.
Bootstrap support for D3BKF7 as seed ortholog is 100%.

Group of orthologs #855. Best score 109 bits
Score difference with first non-orthologous sequence - P.knowlesi:109 P.pallidum:69

B3LAI5              	100.00%		D3B3T7              	100.00%
                    	       		D3B3T6              	80.68%
                    	       		D3BAR5              	39.32%
                    	       		D3BNP5              	33.56%
                    	       		D3AZ39              	22.71%
                    	       		D3BUQ5              	22.37%
                    	       		D3BPF4              	18.64%
                    	       		D3BMF7              	16.27%
                    	       		D3BAJ2              	12.54%
                    	       		D3BKS3              	12.20%
                    	       		D3BKW9              	12.20%
                    	       		D3BMJ1              	11.53%
                    	       		D3BFL6              	10.51%
                    	       		D3BB48              	9.83%
                    	       		D3BRI5              	9.49%
                    	       		D3BKN3              	9.15%
                    	       		D3B9X4              	8.81%
                    	       		D3BFT4              	6.78%
                    	       		D3BBY4              	6.10%
Bootstrap support for B3LAI5 as seed ortholog is 100%.
Bootstrap support for D3B3T7 as seed ortholog is 98%.

Group of orthologs #856. Best score 109 bits
Score difference with first non-orthologous sequence - P.knowlesi:109 P.pallidum:109

B3KZI5              	100.00%		D3BCE5              	100.00%
Bootstrap support for B3KZI5 as seed ortholog is 100%.
Bootstrap support for D3BCE5 as seed ortholog is 100%.

Group of orthologs #857. Best score 109 bits
Score difference with first non-orthologous sequence - P.knowlesi:109 P.pallidum:109

B3L8S6              	100.00%		D3B9C0              	100.00%
Bootstrap support for B3L8S6 as seed ortholog is 100%.
Bootstrap support for D3B9C0 as seed ortholog is 100%.

Group of orthologs #858. Best score 109 bits
Score difference with first non-orthologous sequence - P.knowlesi:109 P.pallidum:109

B3LBZ4              	100.00%		D3B6U0              	100.00%
Bootstrap support for B3LBZ4 as seed ortholog is 100%.
Bootstrap support for D3B6U0 as seed ortholog is 100%.

Group of orthologs #859. Best score 109 bits
Score difference with first non-orthologous sequence - P.knowlesi:109 P.pallidum:109

B3L9Y2              	100.00%		D3BVR4              	100.00%
Bootstrap support for B3L9Y2 as seed ortholog is 100%.
Bootstrap support for D3BVR4 as seed ortholog is 100%.

Group of orthologs #860. Best score 108 bits
Score difference with first non-orthologous sequence - P.knowlesi:108 P.pallidum:108

B3L881              	100.00%		D3BPY8              	100.00%
                    	       		D3BDV9              	43.72%
                    	       		D3B492              	27.51%
Bootstrap support for B3L881 as seed ortholog is 100%.
Bootstrap support for D3BPY8 as seed ortholog is 100%.

Group of orthologs #861. Best score 108 bits
Score difference with first non-orthologous sequence - P.knowlesi:108 P.pallidum:108

B3L1M2              	100.00%		D3B1Q8              	100.00%
Bootstrap support for B3L1M2 as seed ortholog is 100%.
Bootstrap support for D3B1Q8 as seed ortholog is 100%.

Group of orthologs #862. Best score 108 bits
Score difference with first non-orthologous sequence - P.knowlesi:108 P.pallidum:62

B3L2Q6              	100.00%		D3B5S1              	100.00%
Bootstrap support for B3L2Q6 as seed ortholog is 100%.
Bootstrap support for D3B5S1 as seed ortholog is 99%.

Group of orthologs #863. Best score 108 bits
Score difference with first non-orthologous sequence - P.knowlesi:108 P.pallidum:108

B3LD23              	100.00%		D3B267              	100.00%
Bootstrap support for B3LD23 as seed ortholog is 100%.
Bootstrap support for D3B267 as seed ortholog is 100%.

Group of orthologs #864. Best score 108 bits
Score difference with first non-orthologous sequence - P.knowlesi:108 P.pallidum:108

B3L6W4              	100.00%		D3B8K1              	100.00%
Bootstrap support for B3L6W4 as seed ortholog is 100%.
Bootstrap support for D3B8K1 as seed ortholog is 100%.

Group of orthologs #865. Best score 108 bits
Score difference with first non-orthologous sequence - P.knowlesi:108 P.pallidum:108

B3L899              	100.00%		D3BQ53              	100.00%
Bootstrap support for B3L899 as seed ortholog is 100%.
Bootstrap support for D3BQ53 as seed ortholog is 100%.

Group of orthologs #866. Best score 108 bits
Score difference with first non-orthologous sequence - P.knowlesi:108 P.pallidum:108

B3L838              	100.00%		D3BTD4              	100.00%
Bootstrap support for B3L838 as seed ortholog is 100%.
Bootstrap support for D3BTD4 as seed ortholog is 100%.

Group of orthologs #867. Best score 108 bits
Score difference with first non-orthologous sequence - P.knowlesi:108 P.pallidum:108

B3LAL2              	100.00%		D3BVL7              	100.00%
Bootstrap support for B3LAL2 as seed ortholog is 100%.
Bootstrap support for D3BVL7 as seed ortholog is 100%.

Group of orthologs #868. Best score 107 bits
Score difference with first non-orthologous sequence - P.knowlesi:107 P.pallidum:107

B3L798              	100.00%		D3AW79              	100.00%
Bootstrap support for B3L798 as seed ortholog is 100%.
Bootstrap support for D3AW79 as seed ortholog is 100%.

Group of orthologs #869. Best score 107 bits
Score difference with first non-orthologous sequence - P.knowlesi:107 P.pallidum:107

B3L7B9              	100.00%		D3B508              	100.00%
Bootstrap support for B3L7B9 as seed ortholog is 100%.
Bootstrap support for D3B508 as seed ortholog is 100%.

Group of orthologs #870. Best score 107 bits
Score difference with first non-orthologous sequence - P.knowlesi:107 P.pallidum:107

B3KZ52              	100.00%		D3BUG2              	100.00%
Bootstrap support for B3KZ52 as seed ortholog is 100%.
Bootstrap support for D3BUG2 as seed ortholog is 100%.

Group of orthologs #871. Best score 107 bits
Score difference with first non-orthologous sequence - P.knowlesi:107 P.pallidum:107

B3L325              	100.00%		D3BV18              	100.00%
Bootstrap support for B3L325 as seed ortholog is 100%.
Bootstrap support for D3BV18 as seed ortholog is 100%.

Group of orthologs #872. Best score 107 bits
Score difference with first non-orthologous sequence - P.knowlesi:107 P.pallidum:107

B3LBJ2              	100.00%		D3BR47              	100.00%
Bootstrap support for B3LBJ2 as seed ortholog is 100%.
Bootstrap support for D3BR47 as seed ortholog is 100%.

Group of orthologs #873. Best score 106 bits
Score difference with first non-orthologous sequence - P.knowlesi:106 P.pallidum:106

B3L3V9              	100.00%		D3BQA1              	100.00%
Bootstrap support for B3L3V9 as seed ortholog is 100%.
Bootstrap support for D3BQA1 as seed ortholog is 100%.

Group of orthologs #874. Best score 105 bits
Score difference with first non-orthologous sequence - P.knowlesi:105 P.pallidum:52

B3L9G3              	100.00%		D3BTW1              	100.00%
                    	       		D3B556              	14.58%
Bootstrap support for B3L9G3 as seed ortholog is 100%.
Bootstrap support for D3BTW1 as seed ortholog is 67%.
Alternative seed ortholog is D3AWW9 (52 bits away from this cluster)

Group of orthologs #875. Best score 105 bits
Score difference with first non-orthologous sequence - P.knowlesi:105 P.pallidum:105

B3L246              	100.00%		D3BC68              	100.00%
Bootstrap support for B3L246 as seed ortholog is 100%.
Bootstrap support for D3BC68 as seed ortholog is 100%.

Group of orthologs #876. Best score 105 bits
Score difference with first non-orthologous sequence - P.knowlesi:105 P.pallidum:105

B3LAH2              	100.00%		D3B567              	100.00%
Bootstrap support for B3LAH2 as seed ortholog is 100%.
Bootstrap support for D3B567 as seed ortholog is 100%.

Group of orthologs #877. Best score 105 bits
Score difference with first non-orthologous sequence - P.knowlesi:105 P.pallidum:105

B3LBD7              	100.00%		D3BPE8              	100.00%
Bootstrap support for B3LBD7 as seed ortholog is 100%.
Bootstrap support for D3BPE8 as seed ortholog is 100%.

Group of orthologs #878. Best score 104 bits
Score difference with first non-orthologous sequence - P.knowlesi:104 P.pallidum:104

B3L094              	100.00%		D3B4D7              	100.00%
Bootstrap support for B3L094 as seed ortholog is 100%.
Bootstrap support for D3B4D7 as seed ortholog is 100%.

Group of orthologs #879. Best score 104 bits
Score difference with first non-orthologous sequence - P.knowlesi:104 P.pallidum:104

B3L9N7              	100.00%		D3B5L5              	100.00%
Bootstrap support for B3L9N7 as seed ortholog is 100%.
Bootstrap support for D3B5L5 as seed ortholog is 100%.

Group of orthologs #880. Best score 104 bits
Score difference with first non-orthologous sequence - P.knowlesi:104 P.pallidum:104

B3L0D1              	100.00%		D3BSZ7              	100.00%
Bootstrap support for B3L0D1 as seed ortholog is 100%.
Bootstrap support for D3BSZ7 as seed ortholog is 100%.

Group of orthologs #881. Best score 104 bits
Score difference with first non-orthologous sequence - P.knowlesi:104 P.pallidum:104

B3L8Q9              	100.00%		D3BQ45              	100.00%
Bootstrap support for B3L8Q9 as seed ortholog is 100%.
Bootstrap support for D3BQ45 as seed ortholog is 100%.

Group of orthologs #882. Best score 103 bits
Score difference with first non-orthologous sequence - P.knowlesi:103 P.pallidum:103

B3L9A5              	100.00%		D3BSC6              	100.00%
                    	       		D3BFW1              	16.56%
                    	       		D3B9R9              	6.28%
Bootstrap support for B3L9A5 as seed ortholog is 100%.
Bootstrap support for D3BSC6 as seed ortholog is 100%.

Group of orthologs #883. Best score 103 bits
Score difference with first non-orthologous sequence - P.knowlesi:103 P.pallidum:103

B3LDE7              	100.00%		D3AZF2              	100.00%
                    	       		D3BNF0              	13.42%
Bootstrap support for B3LDE7 as seed ortholog is 100%.
Bootstrap support for D3AZF2 as seed ortholog is 100%.

Group of orthologs #884. Best score 103 bits
Score difference with first non-orthologous sequence - P.knowlesi:103 P.pallidum:103

B3L0D2              	100.00%		D3AZU6              	100.00%
Bootstrap support for B3L0D2 as seed ortholog is 100%.
Bootstrap support for D3AZU6 as seed ortholog is 100%.

Group of orthologs #885. Best score 103 bits
Score difference with first non-orthologous sequence - P.knowlesi:103 P.pallidum:103

B3L987              	100.00%		D3AYE5              	100.00%
Bootstrap support for B3L987 as seed ortholog is 100%.
Bootstrap support for D3AYE5 as seed ortholog is 100%.

Group of orthologs #886. Best score 103 bits
Score difference with first non-orthologous sequence - P.knowlesi:103 P.pallidum:103

B3LBW0              	100.00%		D3AW12              	100.00%
Bootstrap support for B3LBW0 as seed ortholog is 100%.
Bootstrap support for D3AW12 as seed ortholog is 100%.

Group of orthologs #887. Best score 103 bits
Score difference with first non-orthologous sequence - P.knowlesi:103 P.pallidum:103

B3L7V2              	100.00%		D3BF17              	100.00%
Bootstrap support for B3L7V2 as seed ortholog is 100%.
Bootstrap support for D3BF17 as seed ortholog is 100%.

Group of orthologs #888. Best score 103 bits
Score difference with first non-orthologous sequence - P.knowlesi:103 P.pallidum:103

B3L0Z8              	100.00%		D3BQT7              	100.00%
Bootstrap support for B3L0Z8 as seed ortholog is 100%.
Bootstrap support for D3BQT7 as seed ortholog is 100%.

Group of orthologs #889. Best score 103 bits
Score difference with first non-orthologous sequence - P.knowlesi:103 P.pallidum:103

B3L6K8              	100.00%		D3BM88              	100.00%
Bootstrap support for B3L6K8 as seed ortholog is 100%.
Bootstrap support for D3BM88 as seed ortholog is 100%.

Group of orthologs #890. Best score 103 bits
Score difference with first non-orthologous sequence - P.knowlesi:103 P.pallidum:103

B3LC65              	100.00%		D3BN30              	100.00%
Bootstrap support for B3LC65 as seed ortholog is 100%.
Bootstrap support for D3BN30 as seed ortholog is 100%.

Group of orthologs #891. Best score 102 bits
Score difference with first non-orthologous sequence - P.knowlesi:102 P.pallidum:102

B3LA73              	100.00%		D3B8W9              	100.00%
                    	       		D3AYW6              	8.12%
Bootstrap support for B3LA73 as seed ortholog is 100%.
Bootstrap support for D3B8W9 as seed ortholog is 100%.

Group of orthologs #892. Best score 102 bits
Score difference with first non-orthologous sequence - P.knowlesi:102 P.pallidum:102

B3L050              	100.00%		D3B2G1              	100.00%
Bootstrap support for B3L050 as seed ortholog is 100%.
Bootstrap support for D3B2G1 as seed ortholog is 100%.

Group of orthologs #893. Best score 102 bits
Score difference with first non-orthologous sequence - P.knowlesi:102 P.pallidum:102

B3L2Y1              	100.00%		D3B4Z7              	100.00%
Bootstrap support for B3L2Y1 as seed ortholog is 100%.
Bootstrap support for D3B4Z7 as seed ortholog is 100%.

Group of orthologs #894. Best score 102 bits
Score difference with first non-orthologous sequence - P.knowlesi:38 P.pallidum:102

B3L0P7              	100.00%		D3BB02              	100.00%
Bootstrap support for B3L0P7 as seed ortholog is 86%.
Bootstrap support for D3BB02 as seed ortholog is 100%.

Group of orthologs #895. Best score 102 bits
Score difference with first non-orthologous sequence - P.knowlesi:102 P.pallidum:102

B3L6D2              	100.00%		D3B760              	100.00%
Bootstrap support for B3L6D2 as seed ortholog is 100%.
Bootstrap support for D3B760 as seed ortholog is 100%.

Group of orthologs #896. Best score 102 bits
Score difference with first non-orthologous sequence - P.knowlesi:102 P.pallidum:102

B3L3U3              	100.00%		D3BL72              	100.00%
Bootstrap support for B3L3U3 as seed ortholog is 100%.
Bootstrap support for D3BL72 as seed ortholog is 100%.

Group of orthologs #897. Best score 102 bits
Score difference with first non-orthologous sequence - P.knowlesi:17 P.pallidum:102

B3L513              	100.00%		D3BM84              	100.00%
Bootstrap support for B3L513 as seed ortholog is 72%.
Alternative seed ortholog is B3L7V6 (17 bits away from this cluster)
Bootstrap support for D3BM84 as seed ortholog is 100%.

Group of orthologs #898. Best score 102 bits
Score difference with first non-orthologous sequence - P.knowlesi:102 P.pallidum:102

B3L001              	100.00%		D3BV55              	100.00%
Bootstrap support for B3L001 as seed ortholog is 100%.
Bootstrap support for D3BV55 as seed ortholog is 100%.

Group of orthologs #899. Best score 102 bits
Score difference with first non-orthologous sequence - P.knowlesi:50 P.pallidum:102

B3L194              	100.00%		D3BUE2              	100.00%
Bootstrap support for B3L194 as seed ortholog is 99%.
Bootstrap support for D3BUE2 as seed ortholog is 100%.

Group of orthologs #900. Best score 102 bits
Score difference with first non-orthologous sequence - P.knowlesi:102 P.pallidum:102

B3L5N0              	100.00%		D3BUT5              	100.00%
Bootstrap support for B3L5N0 as seed ortholog is 100%.
Bootstrap support for D3BUT5 as seed ortholog is 100%.

Group of orthologs #901. Best score 101 bits
Score difference with first non-orthologous sequence - P.knowlesi:101 P.pallidum:101

B3KZI2              	100.00%		D3AXF9              	100.00%
Bootstrap support for B3KZI2 as seed ortholog is 100%.
Bootstrap support for D3AXF9 as seed ortholog is 100%.

Group of orthologs #902. Best score 101 bits
Score difference with first non-orthologous sequence - P.knowlesi:101 P.pallidum:101

B3L9N2              	100.00%		D3AZW3              	100.00%
Bootstrap support for B3L9N2 as seed ortholog is 100%.
Bootstrap support for D3AZW3 as seed ortholog is 100%.

Group of orthologs #903. Best score 101 bits
Score difference with first non-orthologous sequence - P.knowlesi:101 P.pallidum:101

B3L2L4              	100.00%		D3BHL7              	100.00%
Bootstrap support for B3L2L4 as seed ortholog is 100%.
Bootstrap support for D3BHL7 as seed ortholog is 100%.

Group of orthologs #904. Best score 101 bits
Score difference with first non-orthologous sequence - P.knowlesi:101 P.pallidum:101

B3L8R6              	100.00%		D3BGS2              	100.00%
Bootstrap support for B3L8R6 as seed ortholog is 100%.
Bootstrap support for D3BGS2 as seed ortholog is 100%.

Group of orthologs #905. Best score 101 bits
Score difference with first non-orthologous sequence - P.knowlesi:101 P.pallidum:101

B3L1P2              	100.00%		D3BTV9              	100.00%
Bootstrap support for B3L1P2 as seed ortholog is 100%.
Bootstrap support for D3BTV9 as seed ortholog is 100%.

Group of orthologs #906. Best score 101 bits
Score difference with first non-orthologous sequence - P.knowlesi:101 P.pallidum:101

B3L9M9              	100.00%		D3BNR4              	100.00%
Bootstrap support for B3L9M9 as seed ortholog is 100%.
Bootstrap support for D3BNR4 as seed ortholog is 100%.

Group of orthologs #907. Best score 101 bits
Score difference with first non-orthologous sequence - P.knowlesi:101 P.pallidum:101

B3LBP5              	100.00%		D3BP72              	100.00%
Bootstrap support for B3LBP5 as seed ortholog is 100%.
Bootstrap support for D3BP72 as seed ortholog is 100%.

Group of orthologs #908. Best score 100 bits
Score difference with first non-orthologous sequence - P.knowlesi:100 P.pallidum:100

B3L1D1              	100.00%		D3BAZ9              	100.00%
Bootstrap support for B3L1D1 as seed ortholog is 100%.
Bootstrap support for D3BAZ9 as seed ortholog is 100%.

Group of orthologs #909. Best score 100 bits
Score difference with first non-orthologous sequence - P.knowlesi:100 P.pallidum:100

B3L901              	100.00%		D3B4P6              	100.00%
Bootstrap support for B3L901 as seed ortholog is 100%.
Bootstrap support for D3B4P6 as seed ortholog is 100%.

Group of orthologs #910. Best score 100 bits
Score difference with first non-orthologous sequence - P.knowlesi:100 P.pallidum:100

B3LB79              	100.00%		D3B9C3              	100.00%
Bootstrap support for B3LB79 as seed ortholog is 100%.
Bootstrap support for D3B9C3 as seed ortholog is 100%.

Group of orthologs #911. Best score 100 bits
Score difference with first non-orthologous sequence - P.knowlesi:21 P.pallidum:26

B3LC27              	100.00%		D3BK99              	100.00%
Bootstrap support for B3LC27 as seed ortholog is 76%.
Bootstrap support for D3BK99 as seed ortholog is 86%.

Group of orthologs #912. Best score 99 bits
Score difference with first non-orthologous sequence - P.knowlesi:99 P.pallidum:12

B3L2S2              	100.00%		D3B0U5              	100.00%
Bootstrap support for B3L2S2 as seed ortholog is 100%.
Bootstrap support for D3B0U5 as seed ortholog is 71%.
Alternative seed ortholog is D3BE00 (12 bits away from this cluster)

Group of orthologs #913. Best score 99 bits
Score difference with first non-orthologous sequence - P.knowlesi:99 P.pallidum:99

B3L5H7              	100.00%		D3B062              	100.00%
Bootstrap support for B3L5H7 as seed ortholog is 100%.
Bootstrap support for D3B062 as seed ortholog is 100%.

Group of orthologs #914. Best score 99 bits
Score difference with first non-orthologous sequence - P.knowlesi:99 P.pallidum:99

B3L098              	100.00%		D3BEM8              	100.00%
Bootstrap support for B3L098 as seed ortholog is 100%.
Bootstrap support for D3BEM8 as seed ortholog is 100%.

Group of orthologs #915. Best score 99 bits
Score difference with first non-orthologous sequence - P.knowlesi:99 P.pallidum:99

B3L8L0              	100.00%		D3BH46              	100.00%
Bootstrap support for B3L8L0 as seed ortholog is 100%.
Bootstrap support for D3BH46 as seed ortholog is 100%.

Group of orthologs #916. Best score 98 bits
Score difference with first non-orthologous sequence - P.knowlesi:98 P.pallidum:98

B3LAJ3              	100.00%		D3B774              	100.00%
                    	       		D3B266              	5.10%
Bootstrap support for B3LAJ3 as seed ortholog is 100%.
Bootstrap support for D3B774 as seed ortholog is 100%.

Group of orthologs #917. Best score 98 bits
Score difference with first non-orthologous sequence - P.knowlesi:98 P.pallidum:98

B3L174              	100.00%		D3AYE2              	100.00%
Bootstrap support for B3L174 as seed ortholog is 100%.
Bootstrap support for D3AYE2 as seed ortholog is 100%.

Group of orthologs #918. Best score 98 bits
Score difference with first non-orthologous sequence - P.knowlesi:98 P.pallidum:98

B3L0U7              	100.00%		D3B4Y2              	100.00%
Bootstrap support for B3L0U7 as seed ortholog is 100%.
Bootstrap support for D3B4Y2 as seed ortholog is 100%.

Group of orthologs #919. Best score 98 bits
Score difference with first non-orthologous sequence - P.knowlesi:98 P.pallidum:98

B3L2Q3              	100.00%		D3B3G8              	100.00%
Bootstrap support for B3L2Q3 as seed ortholog is 100%.
Bootstrap support for D3B3G8 as seed ortholog is 100%.

Group of orthologs #920. Best score 98 bits
Score difference with first non-orthologous sequence - P.knowlesi:98 P.pallidum:98

B3L4G7              	100.00%		D3B413              	100.00%
Bootstrap support for B3L4G7 as seed ortholog is 100%.
Bootstrap support for D3B413 as seed ortholog is 100%.

Group of orthologs #921. Best score 98 bits
Score difference with first non-orthologous sequence - P.knowlesi:98 P.pallidum:98

B3LA94              	100.00%		D3BGQ4              	100.00%
Bootstrap support for B3LA94 as seed ortholog is 100%.
Bootstrap support for D3BGQ4 as seed ortholog is 100%.

Group of orthologs #922. Best score 98 bits
Score difference with first non-orthologous sequence - P.knowlesi:98 P.pallidum:98

B3L9Z4              	100.00%		D3BK19              	100.00%
Bootstrap support for B3L9Z4 as seed ortholog is 100%.
Bootstrap support for D3BK19 as seed ortholog is 100%.

Group of orthologs #923. Best score 97 bits
Score difference with first non-orthologous sequence - P.knowlesi:97 P.pallidum:97

B3L6N2              	100.00%		D3AZB6              	100.00%
Bootstrap support for B3L6N2 as seed ortholog is 100%.
Bootstrap support for D3AZB6 as seed ortholog is 100%.

Group of orthologs #924. Best score 97 bits
Score difference with first non-orthologous sequence - P.knowlesi:97 P.pallidum:97

B3L4J9              	100.00%		D3B6V9              	100.00%
Bootstrap support for B3L4J9 as seed ortholog is 100%.
Bootstrap support for D3B6V9 as seed ortholog is 100%.

Group of orthologs #925. Best score 97 bits
Score difference with first non-orthologous sequence - P.knowlesi:97 P.pallidum:97

B3L2I4              	100.00%		D3BDC7              	100.00%
Bootstrap support for B3L2I4 as seed ortholog is 100%.
Bootstrap support for D3BDC7 as seed ortholog is 100%.

Group of orthologs #926. Best score 97 bits
Score difference with first non-orthologous sequence - P.knowlesi:97 P.pallidum:97

B3L5F9              	100.00%		D3BU16              	100.00%
Bootstrap support for B3L5F9 as seed ortholog is 100%.
Bootstrap support for D3BU16 as seed ortholog is 100%.

Group of orthologs #927. Best score 97 bits
Score difference with first non-orthologous sequence - P.knowlesi:97 P.pallidum:97

B3L6A4              	100.00%		D3BUZ0              	100.00%
Bootstrap support for B3L6A4 as seed ortholog is 100%.
Bootstrap support for D3BUZ0 as seed ortholog is 100%.

Group of orthologs #928. Best score 96 bits
Score difference with first non-orthologous sequence - P.knowlesi:96 P.pallidum:25

B3L7E6              	100.00%		D3B3P3              	100.00%
                    	       		D3AVL3              	6.57%
                    	       		D3AVQ8              	5.78%
Bootstrap support for B3L7E6 as seed ortholog is 100%.
Bootstrap support for D3B3P3 as seed ortholog is 81%.

Group of orthologs #929. Best score 96 bits
Score difference with first non-orthologous sequence - P.knowlesi:96 P.pallidum:96

B3L090              	100.00%		D3B1K7              	100.00%
Bootstrap support for B3L090 as seed ortholog is 100%.
Bootstrap support for D3B1K7 as seed ortholog is 100%.

Group of orthologs #930. Best score 96 bits
Score difference with first non-orthologous sequence - P.knowlesi:96 P.pallidum:96

B3L3E3              	100.00%		D3BEW0              	100.00%
Bootstrap support for B3L3E3 as seed ortholog is 100%.
Bootstrap support for D3BEW0 as seed ortholog is 100%.

Group of orthologs #931. Best score 96 bits
Score difference with first non-orthologous sequence - P.knowlesi:96 P.pallidum:96

B3LBN2              	100.00%		D3BQC9              	100.00%
Bootstrap support for B3LBN2 as seed ortholog is 100%.
Bootstrap support for D3BQC9 as seed ortholog is 100%.

Group of orthologs #932. Best score 95 bits
Score difference with first non-orthologous sequence - P.knowlesi:95 P.pallidum:95

B3L571              	100.00%		D3BFI4              	100.00%
                    	       		D3BAQ5              	13.55%
                    	       		D3AYF1              	13.20%
Bootstrap support for B3L571 as seed ortholog is 100%.
Bootstrap support for D3BFI4 as seed ortholog is 100%.

Group of orthologs #933. Best score 95 bits
Score difference with first non-orthologous sequence - P.knowlesi:95 P.pallidum:95

B3L233              	100.00%		D3BC65              	100.00%
Bootstrap support for B3L233 as seed ortholog is 100%.
Bootstrap support for D3BC65 as seed ortholog is 100%.

Group of orthologs #934. Best score 95 bits
Score difference with first non-orthologous sequence - P.knowlesi:95 P.pallidum:95

B3LD79              	100.00%		D3B5D0              	100.00%
Bootstrap support for B3LD79 as seed ortholog is 100%.
Bootstrap support for D3B5D0 as seed ortholog is 100%.

Group of orthologs #935. Best score 95 bits
Score difference with first non-orthologous sequence - P.knowlesi:95 P.pallidum:54

B3L1Y0              	100.00%		D3BJJ9              	100.00%
Bootstrap support for B3L1Y0 as seed ortholog is 100%.
Bootstrap support for D3BJJ9 as seed ortholog is 94%.

Group of orthologs #936. Best score 95 bits
Score difference with first non-orthologous sequence - P.knowlesi:95 P.pallidum:95

B3KZA4              	100.00%		D3BRD6              	100.00%
Bootstrap support for B3KZA4 as seed ortholog is 100%.
Bootstrap support for D3BRD6 as seed ortholog is 100%.

Group of orthologs #937. Best score 95 bits
Score difference with first non-orthologous sequence - P.knowlesi:95 P.pallidum:95

B3LAY7              	100.00%		D3BG94              	100.00%
Bootstrap support for B3LAY7 as seed ortholog is 100%.
Bootstrap support for D3BG94 as seed ortholog is 100%.

Group of orthologs #938. Best score 95 bits
Score difference with first non-orthologous sequence - P.knowlesi:95 P.pallidum:95

B3L9W4              	100.00%		D3BJG2              	100.00%
Bootstrap support for B3L9W4 as seed ortholog is 100%.
Bootstrap support for D3BJG2 as seed ortholog is 100%.

Group of orthologs #939. Best score 95 bits
Score difference with first non-orthologous sequence - P.knowlesi:95 P.pallidum:95

B3LAG4              	100.00%		D3BNC7              	100.00%
Bootstrap support for B3LAG4 as seed ortholog is 100%.
Bootstrap support for D3BNC7 as seed ortholog is 100%.

Group of orthologs #940. Best score 95 bits
Score difference with first non-orthologous sequence - P.knowlesi:95 P.pallidum:95

B3L7X7              	100.00%		D3BRN9              	100.00%
Bootstrap support for B3L7X7 as seed ortholog is 100%.
Bootstrap support for D3BRN9 as seed ortholog is 100%.

Group of orthologs #941. Best score 95 bits
Score difference with first non-orthologous sequence - P.knowlesi:95 P.pallidum:95

B3LD77              	100.00%		D3BUI8              	100.00%
Bootstrap support for B3LD77 as seed ortholog is 100%.
Bootstrap support for D3BUI8 as seed ortholog is 100%.

Group of orthologs #942. Best score 94 bits
Score difference with first non-orthologous sequence - P.knowlesi:2 P.pallidum:40

B3KZJ2              	100.00%		D3BAH8              	100.00%
                    	       		D3BAP8              	9.07%
Bootstrap support for B3KZJ2 as seed ortholog is 57%.
Alternative seed ortholog is B3LC98 (2 bits away from this cluster)
Bootstrap support for D3BAH8 as seed ortholog is 88%.

Group of orthologs #943. Best score 94 bits
Score difference with first non-orthologous sequence - P.knowlesi:94 P.pallidum:94

B3L9Z9              	100.00%		D3B7S7              	100.00%
Bootstrap support for B3L9Z9 as seed ortholog is 100%.
Bootstrap support for D3B7S7 as seed ortholog is 100%.

Group of orthologs #944. Best score 94 bits
Score difference with first non-orthologous sequence - P.knowlesi:94 P.pallidum:94

B3LBQ8              	100.00%		D3B9Q4              	100.00%
Bootstrap support for B3LBQ8 as seed ortholog is 100%.
Bootstrap support for D3B9Q4 as seed ortholog is 100%.

Group of orthologs #945. Best score 94 bits
Score difference with first non-orthologous sequence - P.knowlesi:2 P.pallidum:94

B3L7S1              	100.00%		D3BRM0              	100.00%
Bootstrap support for B3L7S1 as seed ortholog is 75%.
Bootstrap support for D3BRM0 as seed ortholog is 100%.

Group of orthologs #946. Best score 93 bits
Score difference with first non-orthologous sequence - P.knowlesi:93 P.pallidum:93

B3L105              	100.00%		D3B4F5              	100.00%
Bootstrap support for B3L105 as seed ortholog is 100%.
Bootstrap support for D3B4F5 as seed ortholog is 100%.

Group of orthologs #947. Best score 93 bits
Score difference with first non-orthologous sequence - P.knowlesi:93 P.pallidum:93

B3L8D8              	100.00%		D3BPR8              	100.00%
Bootstrap support for B3L8D8 as seed ortholog is 100%.
Bootstrap support for D3BPR8 as seed ortholog is 100%.

Group of orthologs #948. Best score 92 bits
Score difference with first non-orthologous sequence - P.knowlesi:92 P.pallidum:92

B3L9Y4              	100.00%		D3B862              	100.00%
Bootstrap support for B3L9Y4 as seed ortholog is 100%.
Bootstrap support for D3B862 as seed ortholog is 100%.

Group of orthologs #949. Best score 92 bits
Score difference with first non-orthologous sequence - P.knowlesi:92 P.pallidum:92

B3L9Y0              	100.00%		D3BFH1              	100.00%
Bootstrap support for B3L9Y0 as seed ortholog is 100%.
Bootstrap support for D3BFH1 as seed ortholog is 100%.

Group of orthologs #950. Best score 91 bits
Score difference with first non-orthologous sequence - P.knowlesi:91 P.pallidum:91

B3L0Q1              	100.00%		D3B7G7              	100.00%
B3L2T0              	10.78%		D3B7G4              	43.02%
                    	       		D3B7G5              	40.43%
                    	       		D3B7G6              	30.30%
Bootstrap support for B3L0Q1 as seed ortholog is 100%.
Bootstrap support for D3B7G7 as seed ortholog is 100%.

Group of orthologs #951. Best score 91 bits
Score difference with first non-orthologous sequence - P.knowlesi:91 P.pallidum:91

B3L1E4              	100.00%		D3AX98              	100.00%
                    	       		D3AYE1              	12.80%
Bootstrap support for B3L1E4 as seed ortholog is 100%.
Bootstrap support for D3AX98 as seed ortholog is 100%.

Group of orthologs #952. Best score 91 bits
Score difference with first non-orthologous sequence - P.knowlesi:91 P.pallidum:91

B3KZI4              	100.00%		D3B201              	100.00%
                    	       		D3BPA0              	15.12%
Bootstrap support for B3KZI4 as seed ortholog is 100%.
Bootstrap support for D3B201 as seed ortholog is 100%.

Group of orthologs #953. Best score 91 bits
Score difference with first non-orthologous sequence - P.knowlesi:91 P.pallidum:42

B3L4F5              	100.00%		D3AXK3              	100.00%
Bootstrap support for B3L4F5 as seed ortholog is 100%.
Bootstrap support for D3AXK3 as seed ortholog is 98%.

Group of orthologs #954. Best score 91 bits
Score difference with first non-orthologous sequence - P.knowlesi:91 P.pallidum:91

B3L9K6              	100.00%		D3BBB0              	100.00%
Bootstrap support for B3L9K6 as seed ortholog is 100%.
Bootstrap support for D3BBB0 as seed ortholog is 100%.

Group of orthologs #955. Best score 91 bits
Score difference with first non-orthologous sequence - P.knowlesi:91 P.pallidum:91

B3LA36              	100.00%		D3BUE5              	100.00%
Bootstrap support for B3LA36 as seed ortholog is 100%.
Bootstrap support for D3BUE5 as seed ortholog is 100%.

Group of orthologs #956. Best score 90 bits
Score difference with first non-orthologous sequence - P.knowlesi:90 P.pallidum:90

B3KZ43              	100.00%		D3BE02              	100.00%
B3L336              	100.00%		
B3KZ42              	39.11%		
B3L0Y4              	38.79%		
B3L1R3              	33.77%		
B3L8U5              	6.65%		
Bootstrap support for B3KZ43 as seed ortholog is 100%.
Bootstrap support for B3L336 as seed ortholog is 100%.
Bootstrap support for D3BE02 as seed ortholog is 100%.

Group of orthologs #957. Best score 90 bits
Score difference with first non-orthologous sequence - P.knowlesi:25 P.pallidum:90

B3L576              	100.00%		D3AY14              	100.00%
Bootstrap support for B3L576 as seed ortholog is 93%.
Bootstrap support for D3AY14 as seed ortholog is 100%.

Group of orthologs #958. Best score 90 bits
Score difference with first non-orthologous sequence - P.knowlesi:90 P.pallidum:90

B3KZ63              	100.00%		D3B4P8              	100.00%
Bootstrap support for B3KZ63 as seed ortholog is 100%.
Bootstrap support for D3B4P8 as seed ortholog is 100%.

Group of orthologs #959. Best score 90 bits
Score difference with first non-orthologous sequence - P.knowlesi:90 P.pallidum:90

B3LC54              	100.00%		D3AYZ7              	100.00%
Bootstrap support for B3LC54 as seed ortholog is 100%.
Bootstrap support for D3AYZ7 as seed ortholog is 100%.

Group of orthologs #960. Best score 90 bits
Score difference with first non-orthologous sequence - P.knowlesi:90 P.pallidum:90

B3L6U3              	100.00%		D3B7B3              	100.00%
Bootstrap support for B3L6U3 as seed ortholog is 100%.
Bootstrap support for D3B7B3 as seed ortholog is 100%.

Group of orthologs #961. Best score 90 bits
Score difference with first non-orthologous sequence - P.knowlesi:90 P.pallidum:90

B3L7G4              	100.00%		D3B9P1              	100.00%
Bootstrap support for B3L7G4 as seed ortholog is 100%.
Bootstrap support for D3B9P1 as seed ortholog is 100%.

Group of orthologs #962. Best score 90 bits
Score difference with first non-orthologous sequence - P.knowlesi:90 P.pallidum:90

B3L766              	100.00%		D3BC41              	100.00%
Bootstrap support for B3L766 as seed ortholog is 100%.
Bootstrap support for D3BC41 as seed ortholog is 100%.

Group of orthologs #963. Best score 90 bits
Score difference with first non-orthologous sequence - P.knowlesi:90 P.pallidum:90

B3LD76              	100.00%		D3B9L7              	100.00%
Bootstrap support for B3LD76 as seed ortholog is 100%.
Bootstrap support for D3B9L7 as seed ortholog is 100%.

Group of orthologs #964. Best score 90 bits
Score difference with first non-orthologous sequence - P.knowlesi:90 P.pallidum:90

B3L3A5              	100.00%		D3BM22              	100.00%
Bootstrap support for B3L3A5 as seed ortholog is 100%.
Bootstrap support for D3BM22 as seed ortholog is 100%.

Group of orthologs #965. Best score 89 bits
Score difference with first non-orthologous sequence - P.knowlesi:16 P.pallidum:89

B3L5Z2              	100.00%		D3BFU7              	100.00%
                    	       		D3AWD8              	10.88%
Bootstrap support for B3L5Z2 as seed ortholog is 62%.
Alternative seed ortholog is B3L8Q0 (16 bits away from this cluster)
Bootstrap support for D3BFU7 as seed ortholog is 100%.

Group of orthologs #966. Best score 89 bits
Score difference with first non-orthologous sequence - P.knowlesi:89 P.pallidum:89

B3L430              	100.00%		D3B7E2              	100.00%
Bootstrap support for B3L430 as seed ortholog is 100%.
Bootstrap support for D3B7E2 as seed ortholog is 100%.

Group of orthologs #967. Best score 89 bits
Score difference with first non-orthologous sequence - P.knowlesi:89 P.pallidum:89

B3L354              	100.00%		D3BFL2              	100.00%
Bootstrap support for B3L354 as seed ortholog is 100%.
Bootstrap support for D3BFL2 as seed ortholog is 100%.

Group of orthologs #968. Best score 89 bits
Score difference with first non-orthologous sequence - P.knowlesi:89 P.pallidum:89

B3LCH2              	100.00%		D3BAS3              	100.00%
Bootstrap support for B3LCH2 as seed ortholog is 100%.
Bootstrap support for D3BAS3 as seed ortholog is 100%.

Group of orthologs #969. Best score 89 bits
Score difference with first non-orthologous sequence - P.knowlesi:89 P.pallidum:46

B3L025              	100.00%		D3BQN3              	100.00%
Bootstrap support for B3L025 as seed ortholog is 100%.
Bootstrap support for D3BQN3 as seed ortholog is 87%.

Group of orthologs #970. Best score 89 bits
Score difference with first non-orthologous sequence - P.knowlesi:89 P.pallidum:89

B3L5Y6              	100.00%		D3BQ40              	100.00%
Bootstrap support for B3L5Y6 as seed ortholog is 100%.
Bootstrap support for D3BQ40 as seed ortholog is 100%.

Group of orthologs #971. Best score 89 bits
Score difference with first non-orthologous sequence - P.knowlesi:89 P.pallidum:89

B3L6U4              	100.00%		D3BR16              	100.00%
Bootstrap support for B3L6U4 as seed ortholog is 100%.
Bootstrap support for D3BR16 as seed ortholog is 100%.

Group of orthologs #972. Best score 89 bits
Score difference with first non-orthologous sequence - P.knowlesi:89 P.pallidum:89

B3LAV5              	100.00%		D3BM05              	100.00%
Bootstrap support for B3LAV5 as seed ortholog is 100%.
Bootstrap support for D3BM05 as seed ortholog is 100%.

Group of orthologs #973. Best score 88 bits
Score difference with first non-orthologous sequence - P.knowlesi:88 P.pallidum:88

B3L9X4              	100.00%		D3B6R3              	100.00%
Bootstrap support for B3L9X4 as seed ortholog is 100%.
Bootstrap support for D3B6R3 as seed ortholog is 100%.

Group of orthologs #974. Best score 88 bits
Score difference with first non-orthologous sequence - P.knowlesi:88 P.pallidum:88

B3L9H6              	100.00%		D3BIR5              	100.00%
Bootstrap support for B3L9H6 as seed ortholog is 100%.
Bootstrap support for D3BIR5 as seed ortholog is 100%.

Group of orthologs #975. Best score 87 bits
Score difference with first non-orthologous sequence - P.knowlesi:45 P.pallidum:34

B3LD56              	100.00%		D3BBA4              	100.00%
                    	       		D3BEF7              	7.71%
                    	       		D3BFJ2              	6.55%
                    	       		D3B5I3              	5.78%
Bootstrap support for B3LD56 as seed ortholog is 91%.
Bootstrap support for D3BBA4 as seed ortholog is 82%.

Group of orthologs #976. Best score 87 bits
Score difference with first non-orthologous sequence - P.knowlesi:87 P.pallidum:87

B3L375              	100.00%		D3B0Y6              	100.00%
Bootstrap support for B3L375 as seed ortholog is 100%.
Bootstrap support for D3B0Y6 as seed ortholog is 100%.

Group of orthologs #977. Best score 87 bits
Score difference with first non-orthologous sequence - P.knowlesi:43 P.pallidum:39

B3L925              	100.00%		D3AZU2              	100.00%
Bootstrap support for B3L925 as seed ortholog is 89%.
Bootstrap support for D3AZU2 as seed ortholog is 93%.

Group of orthologs #978. Best score 87 bits
Score difference with first non-orthologous sequence - P.knowlesi:87 P.pallidum:87

B3L9T3              	100.00%		D3B3V3              	100.00%
Bootstrap support for B3L9T3 as seed ortholog is 100%.
Bootstrap support for D3B3V3 as seed ortholog is 100%.

Group of orthologs #979. Best score 87 bits
Score difference with first non-orthologous sequence - P.knowlesi:87 P.pallidum:87

B3LBG7              	100.00%		D3BB09              	100.00%
Bootstrap support for B3LBG7 as seed ortholog is 100%.
Bootstrap support for D3BB09 as seed ortholog is 100%.

Group of orthologs #980. Best score 87 bits
Score difference with first non-orthologous sequence - P.knowlesi:87 P.pallidum:87

B3L7D6              	100.00%		D3BHA2              	100.00%
Bootstrap support for B3L7D6 as seed ortholog is 100%.
Bootstrap support for D3BHA2 as seed ortholog is 100%.

Group of orthologs #981. Best score 86 bits
Score difference with first non-orthologous sequence - P.knowlesi:86 P.pallidum:86

B3L321              	100.00%		D3B613              	100.00%
Bootstrap support for B3L321 as seed ortholog is 100%.
Bootstrap support for D3B613 as seed ortholog is 100%.

Group of orthologs #982. Best score 86 bits
Score difference with first non-orthologous sequence - P.knowlesi:86 P.pallidum:86

B3LCC5              	100.00%		D3B475              	100.00%
Bootstrap support for B3LCC5 as seed ortholog is 100%.
Bootstrap support for D3B475 as seed ortholog is 100%.

Group of orthologs #983. Best score 86 bits
Score difference with first non-orthologous sequence - P.knowlesi:86 P.pallidum:86

B3LAX3              	100.00%		D3BG96              	100.00%
Bootstrap support for B3LAX3 as seed ortholog is 100%.
Bootstrap support for D3BG96 as seed ortholog is 100%.

Group of orthologs #984. Best score 86 bits
Score difference with first non-orthologous sequence - P.knowlesi:86 P.pallidum:86

B3LBQ3              	100.00%		D3BK63              	100.00%
Bootstrap support for B3LBQ3 as seed ortholog is 100%.
Bootstrap support for D3BK63 as seed ortholog is 100%.

Group of orthologs #985. Best score 86 bits
Score difference with first non-orthologous sequence - P.knowlesi:86 P.pallidum:86

B3L6X2              	100.00%		D3BUX7              	100.00%
Bootstrap support for B3L6X2 as seed ortholog is 100%.
Bootstrap support for D3BUX7 as seed ortholog is 100%.

Group of orthologs #986. Best score 86 bits
Score difference with first non-orthologous sequence - P.knowlesi:86 P.pallidum:86

B3LCD3              	100.00%		D3BTL0              	100.00%
Bootstrap support for B3LCD3 as seed ortholog is 100%.
Bootstrap support for D3BTL0 as seed ortholog is 100%.

Group of orthologs #987. Best score 85 bits
Score difference with first non-orthologous sequence - P.knowlesi:85 P.pallidum:24

B3L297              	100.00%		D3BA43              	100.00%
B3LCQ3              	6.51%		
Bootstrap support for B3L297 as seed ortholog is 100%.
Bootstrap support for D3BA43 as seed ortholog is 73%.
Alternative seed ortholog is D3B604 (24 bits away from this cluster)

Group of orthologs #988. Best score 85 bits
Score difference with first non-orthologous sequence - P.knowlesi:38 P.pallidum:85

B3L2U6              	100.00%		D3BKH9              	100.00%
Bootstrap support for B3L2U6 as seed ortholog is 96%.
Bootstrap support for D3BKH9 as seed ortholog is 100%.

Group of orthologs #989. Best score 84 bits
Score difference with first non-orthologous sequence - P.knowlesi:84 P.pallidum:84

B3L554              	100.00%		D3BAU6              	100.00%
Bootstrap support for B3L554 as seed ortholog is 100%.
Bootstrap support for D3BAU6 as seed ortholog is 100%.

Group of orthologs #990. Best score 84 bits
Score difference with first non-orthologous sequence - P.knowlesi:84 P.pallidum:84

B3L5R2              	100.00%		D3BBS5              	100.00%
Bootstrap support for B3L5R2 as seed ortholog is 100%.
Bootstrap support for D3BBS5 as seed ortholog is 100%.

Group of orthologs #991. Best score 84 bits
Score difference with first non-orthologous sequence - P.knowlesi:84 P.pallidum:84

B3L5P5              	100.00%		D3BK43              	100.00%
Bootstrap support for B3L5P5 as seed ortholog is 100%.
Bootstrap support for D3BK43 as seed ortholog is 100%.

Group of orthologs #992. Best score 84 bits
Score difference with first non-orthologous sequence - P.knowlesi:84 P.pallidum:84

B3L6Z8              	100.00%		D3BQV3              	100.00%
Bootstrap support for B3L6Z8 as seed ortholog is 100%.
Bootstrap support for D3BQV3 as seed ortholog is 100%.

Group of orthologs #993. Best score 83 bits
Score difference with first non-orthologous sequence - P.knowlesi:83 P.pallidum:83

B3L3R4              	100.00%		D3AYL6              	100.00%
Bootstrap support for B3L3R4 as seed ortholog is 100%.
Bootstrap support for D3AYL6 as seed ortholog is 100%.

Group of orthologs #994. Best score 83 bits
Score difference with first non-orthologous sequence - P.knowlesi:83 P.pallidum:83

B3L6L2              	100.00%		D3BI32              	100.00%
Bootstrap support for B3L6L2 as seed ortholog is 100%.
Bootstrap support for D3BI32 as seed ortholog is 100%.

Group of orthologs #995. Best score 82 bits
Score difference with first non-orthologous sequence - P.knowlesi:82 P.pallidum:82

B3KZM6              	100.00%		D3BU12              	100.00%
B3KZM7              	13.26%		
B3L5A6              	5.98%		
Bootstrap support for B3KZM6 as seed ortholog is 100%.
Bootstrap support for D3BU12 as seed ortholog is 100%.

Group of orthologs #996. Best score 82 bits
Score difference with first non-orthologous sequence - P.knowlesi:82 P.pallidum:82

B3L2K8              	100.00%		D3BU31              	100.00%
B3LAM6              	5.01%		
Bootstrap support for B3L2K8 as seed ortholog is 100%.
Bootstrap support for D3BU31 as seed ortholog is 100%.

Group of orthologs #997. Best score 82 bits
Score difference with first non-orthologous sequence - P.knowlesi:82 P.pallidum:82

B3LC62              	100.00%		D3BU74              	100.00%
                    	       		D3B836              	5.57%
Bootstrap support for B3LC62 as seed ortholog is 100%.
Bootstrap support for D3BU74 as seed ortholog is 100%.

Group of orthologs #998. Best score 82 bits
Score difference with first non-orthologous sequence - P.knowlesi:82 P.pallidum:82

B3L2X6              	100.00%		D3AVP8              	100.00%
Bootstrap support for B3L2X6 as seed ortholog is 100%.
Bootstrap support for D3AVP8 as seed ortholog is 100%.

Group of orthologs #999. Best score 82 bits
Score difference with first non-orthologous sequence - P.knowlesi:82 P.pallidum:82

B3L3N1              	100.00%		D3B631              	100.00%
Bootstrap support for B3L3N1 as seed ortholog is 100%.
Bootstrap support for D3B631 as seed ortholog is 100%.

Group of orthologs #1000. Best score 82 bits
Score difference with first non-orthologous sequence - P.knowlesi:82 P.pallidum:82

B3L0E1              	100.00%		D3B9S7              	100.00%
Bootstrap support for B3L0E1 as seed ortholog is 100%.
Bootstrap support for D3B9S7 as seed ortholog is 100%.

Group of orthologs #1001. Best score 82 bits
Score difference with first non-orthologous sequence - P.knowlesi:21 P.pallidum:82

B3L0N5              	100.00%		D3BGY8              	100.00%
Bootstrap support for B3L0N5 as seed ortholog is 77%.
Bootstrap support for D3BGY8 as seed ortholog is 100%.

Group of orthologs #1002. Best score 82 bits
Score difference with first non-orthologous sequence - P.knowlesi:82 P.pallidum:82

B3L7P4              	100.00%		D3BBZ9              	100.00%
Bootstrap support for B3L7P4 as seed ortholog is 100%.
Bootstrap support for D3BBZ9 as seed ortholog is 100%.

Group of orthologs #1003. Best score 82 bits
Score difference with first non-orthologous sequence - P.knowlesi:82 P.pallidum:82

B3LBM4              	100.00%		D3BBK8              	100.00%
Bootstrap support for B3LBM4 as seed ortholog is 100%.
Bootstrap support for D3BBK8 as seed ortholog is 100%.

Group of orthologs #1004. Best score 82 bits
Score difference with first non-orthologous sequence - P.knowlesi:82 P.pallidum:82

B3L891              	100.00%		D3BJY7              	100.00%
Bootstrap support for B3L891 as seed ortholog is 100%.
Bootstrap support for D3BJY7 as seed ortholog is 100%.

Group of orthologs #1005. Best score 82 bits
Score difference with first non-orthologous sequence - P.knowlesi:82 P.pallidum:82

B3KZS5              	100.00%		D3BVL0              	100.00%
Bootstrap support for B3KZS5 as seed ortholog is 100%.
Bootstrap support for D3BVL0 as seed ortholog is 100%.

Group of orthologs #1006. Best score 81 bits
Score difference with first non-orthologous sequence - P.knowlesi:81 P.pallidum:81

B3L563              	100.00%		D3B2S2              	100.00%
B3LCD0              	8.37%		D3AZ81              	8.54%
                    	       		D3BH37              	6.47%
Bootstrap support for B3L563 as seed ortholog is 100%.
Bootstrap support for D3B2S2 as seed ortholog is 100%.

Group of orthologs #1007. Best score 81 bits
Score difference with first non-orthologous sequence - P.knowlesi:81 P.pallidum:81

B3L3K4              	100.00%		D3B1I1              	100.00%
Bootstrap support for B3L3K4 as seed ortholog is 100%.
Bootstrap support for D3B1I1 as seed ortholog is 100%.

Group of orthologs #1008. Best score 81 bits
Score difference with first non-orthologous sequence - P.knowlesi:81 P.pallidum:81

B3L745              	100.00%		D3B4U0              	100.00%
Bootstrap support for B3L745 as seed ortholog is 100%.
Bootstrap support for D3B4U0 as seed ortholog is 100%.

Group of orthologs #1009. Best score 81 bits
Score difference with first non-orthologous sequence - P.knowlesi:81 P.pallidum:81

B3L087              	100.00%		D3BKE3              	100.00%
Bootstrap support for B3L087 as seed ortholog is 100%.
Bootstrap support for D3BKE3 as seed ortholog is 100%.

Group of orthologs #1010. Best score 81 bits
Score difference with first non-orthologous sequence - P.knowlesi:81 P.pallidum:5

B3L053              	100.00%		D3BKH8              	100.00%
Bootstrap support for B3L053 as seed ortholog is 100%.
Bootstrap support for D3BKH8 as seed ortholog is 80%.

Group of orthologs #1011. Best score 81 bits
Score difference with first non-orthologous sequence - P.knowlesi:81 P.pallidum:81

B3L9G7              	100.00%		D3BCH8              	100.00%
Bootstrap support for B3L9G7 as seed ortholog is 100%.
Bootstrap support for D3BCH8 as seed ortholog is 100%.

Group of orthologs #1012. Best score 81 bits
Score difference with first non-orthologous sequence - P.knowlesi:81 P.pallidum:81

B3L1V8              	100.00%		D3BMH3              	100.00%
Bootstrap support for B3L1V8 as seed ortholog is 100%.
Bootstrap support for D3BMH3 as seed ortholog is 100%.

Group of orthologs #1013. Best score 81 bits
Score difference with first non-orthologous sequence - P.knowlesi:81 P.pallidum:81

B3LAR6              	100.00%		D3BDP9              	100.00%
Bootstrap support for B3LAR6 as seed ortholog is 100%.
Bootstrap support for D3BDP9 as seed ortholog is 100%.

Group of orthologs #1014. Best score 81 bits
Score difference with first non-orthologous sequence - P.knowlesi:81 P.pallidum:81

B3LAB4              	100.00%		D3BIL3              	100.00%
Bootstrap support for B3LAB4 as seed ortholog is 100%.
Bootstrap support for D3BIL3 as seed ortholog is 100%.

Group of orthologs #1015. Best score 81 bits
Score difference with first non-orthologous sequence - P.knowlesi:81 P.pallidum:81

B3L4A3              	100.00%		D3BRR6              	100.00%
Bootstrap support for B3L4A3 as seed ortholog is 100%.
Bootstrap support for D3BRR6 as seed ortholog is 100%.

Group of orthologs #1016. Best score 81 bits
Score difference with first non-orthologous sequence - P.knowlesi:81 P.pallidum:81

B3L5N5              	100.00%		D3BUI0              	100.00%
Bootstrap support for B3L5N5 as seed ortholog is 100%.
Bootstrap support for D3BUI0 as seed ortholog is 100%.

Group of orthologs #1017. Best score 80 bits
Score difference with first non-orthologous sequence - P.knowlesi:80 P.pallidum:80

B3LCE6              	100.00%		D3B2Q5              	100.00%
Bootstrap support for B3LCE6 as seed ortholog is 100%.
Bootstrap support for D3B2Q5 as seed ortholog is 100%.

Group of orthologs #1018. Best score 80 bits
Score difference with first non-orthologous sequence - P.knowlesi:80 P.pallidum:80

B3L1V9              	100.00%		D3BP63              	100.00%
Bootstrap support for B3L1V9 as seed ortholog is 100%.
Bootstrap support for D3BP63 as seed ortholog is 100%.

Group of orthologs #1019. Best score 80 bits
Score difference with first non-orthologous sequence - P.knowlesi:80 P.pallidum:80

B3L7D4              	100.00%		D3BMD7              	100.00%
Bootstrap support for B3L7D4 as seed ortholog is 100%.
Bootstrap support for D3BMD7 as seed ortholog is 100%.

Group of orthologs #1020. Best score 79 bits
Score difference with first non-orthologous sequence - P.knowlesi:79 P.pallidum:79

B3L0L9              	100.00%		D3AYV5              	100.00%
                    	       		D3BRL5              	11.02%
Bootstrap support for B3L0L9 as seed ortholog is 100%.
Bootstrap support for D3AYV5 as seed ortholog is 100%.

Group of orthologs #1021. Best score 79 bits
Score difference with first non-orthologous sequence - P.knowlesi:79 P.pallidum:79

B3L5D7              	100.00%		D3B1V3              	100.00%
Bootstrap support for B3L5D7 as seed ortholog is 100%.
Bootstrap support for D3B1V3 as seed ortholog is 100%.

Group of orthologs #1022. Best score 79 bits
Score difference with first non-orthologous sequence - P.knowlesi:79 P.pallidum:79

B3LAV8              	100.00%		D3AYJ3              	100.00%
Bootstrap support for B3LAV8 as seed ortholog is 100%.
Bootstrap support for D3AYJ3 as seed ortholog is 100%.

Group of orthologs #1023. Best score 79 bits
Score difference with first non-orthologous sequence - P.knowlesi:79 P.pallidum:79

B3L9F7              	100.00%		D3BK76              	100.00%
Bootstrap support for B3L9F7 as seed ortholog is 100%.
Bootstrap support for D3BK76 as seed ortholog is 100%.

Group of orthologs #1024. Best score 79 bits
Score difference with first non-orthologous sequence - P.knowlesi:79 P.pallidum:35

B3L707              	100.00%		D3BNF6              	100.00%
Bootstrap support for B3L707 as seed ortholog is 100%.
Bootstrap support for D3BNF6 as seed ortholog is 94%.

Group of orthologs #1025. Best score 78 bits
Score difference with first non-orthologous sequence - P.knowlesi:78 P.pallidum:78

B3LDD7              	100.00%		D3BL51              	100.00%
                    	       		D3BR40              	11.26%
                    	       		D3BSB7              	8.88%
                    	       		D3B9H4              	7.78%
Bootstrap support for B3LDD7 as seed ortholog is 100%.
Bootstrap support for D3BL51 as seed ortholog is 100%.

Group of orthologs #1026. Best score 78 bits
Score difference with first non-orthologous sequence - P.knowlesi:37 P.pallidum:78

B3L168              	100.00%		D3AWW2              	100.00%
Bootstrap support for B3L168 as seed ortholog is 99%.
Bootstrap support for D3AWW2 as seed ortholog is 100%.

Group of orthologs #1027. Best score 78 bits
Score difference with first non-orthologous sequence - P.knowlesi:78 P.pallidum:78

B3L379              	100.00%		D3AYP4              	100.00%
Bootstrap support for B3L379 as seed ortholog is 100%.
Bootstrap support for D3AYP4 as seed ortholog is 100%.

Group of orthologs #1028. Best score 78 bits
Score difference with first non-orthologous sequence - P.knowlesi:78 P.pallidum:78

B3L1A2              	100.00%		D3BS90              	100.00%
Bootstrap support for B3L1A2 as seed ortholog is 100%.
Bootstrap support for D3BS90 as seed ortholog is 100%.

Group of orthologs #1029. Best score 77 bits
Score difference with first non-orthologous sequence - P.knowlesi:77 P.pallidum:77

B3L0K9              	100.00%		D3B416              	100.00%
Bootstrap support for B3L0K9 as seed ortholog is 100%.
Bootstrap support for D3B416 as seed ortholog is 100%.

Group of orthologs #1030. Best score 77 bits
Score difference with first non-orthologous sequence - P.knowlesi:77 P.pallidum:77

B3L4Z4              	100.00%		D3BLD3              	100.00%
Bootstrap support for B3L4Z4 as seed ortholog is 100%.
Bootstrap support for D3BLD3 as seed ortholog is 100%.

Group of orthologs #1031. Best score 77 bits
Score difference with first non-orthologous sequence - P.knowlesi:77 P.pallidum:7

B3L1H2              	100.00%		D3BR31              	100.00%
Bootstrap support for B3L1H2 as seed ortholog is 100%.
Bootstrap support for D3BR31 as seed ortholog is 56%.
Alternative seed ortholog is D3B3T0 (7 bits away from this cluster)

Group of orthologs #1032. Best score 77 bits
Score difference with first non-orthologous sequence - P.knowlesi:77 P.pallidum:19

B3L5F0              	100.00%		D3BNF1              	100.00%
Bootstrap support for B3L5F0 as seed ortholog is 100%.
Bootstrap support for D3BNF1 as seed ortholog is 68%.
Alternative seed ortholog is D3BKZ3 (19 bits away from this cluster)

Group of orthologs #1033. Best score 76 bits
Score difference with first non-orthologous sequence - P.knowlesi:76 P.pallidum:76

B3L0D3              	100.00%		D3AVN1              	100.00%
Bootstrap support for B3L0D3 as seed ortholog is 100%.
Bootstrap support for D3AVN1 as seed ortholog is 100%.

Group of orthologs #1034. Best score 76 bits
Score difference with first non-orthologous sequence - P.knowlesi:76 P.pallidum:76

B3L4F0              	100.00%		D3BAV8              	100.00%
Bootstrap support for B3L4F0 as seed ortholog is 100%.
Bootstrap support for D3BAV8 as seed ortholog is 100%.

Group of orthologs #1035. Best score 76 bits
Score difference with first non-orthologous sequence - P.knowlesi:76 P.pallidum:76

B3KZ70              	100.00%		D3BK79              	100.00%
Bootstrap support for B3KZ70 as seed ortholog is 100%.
Bootstrap support for D3BK79 as seed ortholog is 100%.

Group of orthologs #1036. Best score 76 bits
Score difference with first non-orthologous sequence - P.knowlesi:76 P.pallidum:76

B3L3B8              	100.00%		D3BMA2              	100.00%
Bootstrap support for B3L3B8 as seed ortholog is 100%.
Bootstrap support for D3BMA2 as seed ortholog is 100%.

Group of orthologs #1037. Best score 76 bits
Score difference with first non-orthologous sequence - P.knowlesi:76 P.pallidum:76

B3L218              	100.00%		D3BTG7              	100.00%
Bootstrap support for B3L218 as seed ortholog is 100%.
Bootstrap support for D3BTG7 as seed ortholog is 100%.

Group of orthologs #1038. Best score 76 bits
Score difference with first non-orthologous sequence - P.knowlesi:76 P.pallidum:76

B3L9U1              	100.00%		D3BNJ0              	100.00%
Bootstrap support for B3L9U1 as seed ortholog is 100%.
Bootstrap support for D3BNJ0 as seed ortholog is 100%.

Group of orthologs #1039. Best score 76 bits
Score difference with first non-orthologous sequence - P.knowlesi:32 P.pallidum:76

B3L900              	100.00%		D3BV60              	100.00%
Bootstrap support for B3L900 as seed ortholog is 72%.
Alternative seed ortholog is B3L9A3 (32 bits away from this cluster)
Bootstrap support for D3BV60 as seed ortholog is 100%.

Group of orthologs #1040. Best score 75 bits
Score difference with first non-orthologous sequence - P.knowlesi:75 P.pallidum:75

B3L3H4              	100.00%		D3BCM5              	100.00%
Bootstrap support for B3L3H4 as seed ortholog is 100%.
Bootstrap support for D3BCM5 as seed ortholog is 100%.

Group of orthologs #1041. Best score 75 bits
Score difference with first non-orthologous sequence - P.knowlesi:75 P.pallidum:75

B3L1B4              	100.00%		D3BT65              	100.00%
Bootstrap support for B3L1B4 as seed ortholog is 100%.
Bootstrap support for D3BT65 as seed ortholog is 100%.

Group of orthologs #1042. Best score 75 bits
Score difference with first non-orthologous sequence - P.knowlesi:75 P.pallidum:75

B3L7J1              	100.00%		D3BN29              	100.00%
Bootstrap support for B3L7J1 as seed ortholog is 100%.
Bootstrap support for D3BN29 as seed ortholog is 100%.

Group of orthologs #1043. Best score 74 bits
Score difference with first non-orthologous sequence - P.knowlesi:74 P.pallidum:74

B3L2N7              	100.00%		D3BFW7              	100.00%
                    	       		D3BP85              	7.75%
Bootstrap support for B3L2N7 as seed ortholog is 100%.
Bootstrap support for D3BFW7 as seed ortholog is 100%.

Group of orthologs #1044. Best score 74 bits
Score difference with first non-orthologous sequence - P.knowlesi:74 P.pallidum:74

B3L060              	100.00%		D3BBU4              	100.00%
Bootstrap support for B3L060 as seed ortholog is 100%.
Bootstrap support for D3BBU4 as seed ortholog is 100%.

Group of orthologs #1045. Best score 74 bits
Score difference with first non-orthologous sequence - P.knowlesi:74 P.pallidum:74

B3L5M0              	100.00%		D3BEQ8              	100.00%
Bootstrap support for B3L5M0 as seed ortholog is 100%.
Bootstrap support for D3BEQ8 as seed ortholog is 100%.

Group of orthologs #1046. Best score 74 bits
Score difference with first non-orthologous sequence - P.knowlesi:74 P.pallidum:74

B3L869              	100.00%		D3BH63              	100.00%
Bootstrap support for B3L869 as seed ortholog is 100%.
Bootstrap support for D3BH63 as seed ortholog is 100%.

Group of orthologs #1047. Best score 74 bits
Score difference with first non-orthologous sequence - P.knowlesi:74 P.pallidum:74

B3LDA8              	100.00%		D3BPC7              	100.00%
Bootstrap support for B3LDA8 as seed ortholog is 100%.
Bootstrap support for D3BPC7 as seed ortholog is 100%.

Group of orthologs #1048. Best score 73 bits
Score difference with first non-orthologous sequence - P.knowlesi:73 P.pallidum:73

B3LB17              	100.00%		D3B811              	100.00%
B3L1C1              	29.50%		
Bootstrap support for B3LB17 as seed ortholog is 100%.
Bootstrap support for D3B811 as seed ortholog is 100%.

Group of orthologs #1049. Best score 73 bits
Score difference with first non-orthologous sequence - P.knowlesi:73 P.pallidum:13

B3L9L7              	100.00%		D3BKD3              	100.00%
                    	       		D3BNB6              	7.32%
Bootstrap support for B3L9L7 as seed ortholog is 100%.
Bootstrap support for D3BKD3 as seed ortholog is 70%.
Alternative seed ortholog is D3B6Q8 (13 bits away from this cluster)

Group of orthologs #1050. Best score 73 bits
Score difference with first non-orthologous sequence - P.knowlesi:73 P.pallidum:73

B3L358              	100.00%		D3AZR0              	100.00%
Bootstrap support for B3L358 as seed ortholog is 100%.
Bootstrap support for D3AZR0 as seed ortholog is 100%.

Group of orthologs #1051. Best score 73 bits
Score difference with first non-orthologous sequence - P.knowlesi:73 P.pallidum:73

B3L155              	100.00%		D3B482              	100.00%
Bootstrap support for B3L155 as seed ortholog is 100%.
Bootstrap support for D3B482 as seed ortholog is 100%.

Group of orthologs #1052. Best score 73 bits
Score difference with first non-orthologous sequence - P.knowlesi:73 P.pallidum:73

B3L0H6              	100.00%		D3BKF8              	100.00%
Bootstrap support for B3L0H6 as seed ortholog is 100%.
Bootstrap support for D3BKF8 as seed ortholog is 100%.

Group of orthologs #1053. Best score 73 bits
Score difference with first non-orthologous sequence - P.knowlesi:73 P.pallidum:73

B3LAP2              	100.00%		D3BQ01              	100.00%
Bootstrap support for B3LAP2 as seed ortholog is 100%.
Bootstrap support for D3BQ01 as seed ortholog is 100%.

Group of orthologs #1054. Best score 72 bits
Score difference with first non-orthologous sequence - P.knowlesi:18 P.pallidum:10

B3LBK6              	100.00%		D3BFW6              	100.00%
                    	       		D3B498              	7.05%
Bootstrap support for B3LBK6 as seed ortholog is 77%.
Bootstrap support for D3BFW6 as seed ortholog is 51%.
Alternative seed ortholog is D3BNK1 (10 bits away from this cluster)

Group of orthologs #1055. Best score 72 bits
Score difference with first non-orthologous sequence - P.knowlesi:72 P.pallidum:72

B3L0Q4              	100.00%		D3B351              	100.00%
Bootstrap support for B3L0Q4 as seed ortholog is 100%.
Bootstrap support for D3B351 as seed ortholog is 100%.

Group of orthologs #1056. Best score 72 bits
Score difference with first non-orthologous sequence - P.knowlesi:72 P.pallidum:72

B3L636              	100.00%		D3B5L6              	100.00%
Bootstrap support for B3L636 as seed ortholog is 100%.
Bootstrap support for D3B5L6 as seed ortholog is 100%.

Group of orthologs #1057. Best score 72 bits
Score difference with first non-orthologous sequence - P.knowlesi:22 P.pallidum:72

B3L2S1              	100.00%		D3BAT7              	100.00%
Bootstrap support for B3L2S1 as seed ortholog is 89%.
Bootstrap support for D3BAT7 as seed ortholog is 100%.

Group of orthologs #1058. Best score 72 bits
Score difference with first non-orthologous sequence - P.knowlesi:29 P.pallidum:24

B3L9J3              	100.00%		D3B6I2              	100.00%
Bootstrap support for B3L9J3 as seed ortholog is 91%.
Bootstrap support for D3B6I2 as seed ortholog is 90%.

Group of orthologs #1059. Best score 72 bits
Score difference with first non-orthologous sequence - P.knowlesi:72 P.pallidum:72

B3KZY6              	100.00%		D3BHC8              	100.00%
Bootstrap support for B3KZY6 as seed ortholog is 100%.
Bootstrap support for D3BHC8 as seed ortholog is 100%.

Group of orthologs #1060. Best score 72 bits
Score difference with first non-orthologous sequence - P.knowlesi:72 P.pallidum:72

B3LCF8              	100.00%		D3B7W9              	100.00%
Bootstrap support for B3LCF8 as seed ortholog is 100%.
Bootstrap support for D3B7W9 as seed ortholog is 100%.

Group of orthologs #1061. Best score 72 bits
Score difference with first non-orthologous sequence - P.knowlesi:72 P.pallidum:72

B3L451              	100.00%		D3BHD2              	100.00%
Bootstrap support for B3L451 as seed ortholog is 100%.
Bootstrap support for D3BHD2 as seed ortholog is 100%.

Group of orthologs #1062. Best score 72 bits
Score difference with first non-orthologous sequence - P.knowlesi:72 P.pallidum:72

B3L7T3              	100.00%		D3BG34              	100.00%
Bootstrap support for B3L7T3 as seed ortholog is 100%.
Bootstrap support for D3BG34 as seed ortholog is 100%.

Group of orthologs #1063. Best score 71 bits
Score difference with first non-orthologous sequence - P.knowlesi:71 P.pallidum:23

B3L583              	100.00%		D3B8B1              	100.00%
                    	       		D3BL18              	6.41%
                    	       		D3BQ72              	5.03%
Bootstrap support for B3L583 as seed ortholog is 100%.
Bootstrap support for D3B8B1 as seed ortholog is 80%.

Group of orthologs #1064. Best score 71 bits
Score difference with first non-orthologous sequence - P.knowlesi:71 P.pallidum:71

B3L106              	100.00%		D3B503              	100.00%
Bootstrap support for B3L106 as seed ortholog is 100%.
Bootstrap support for D3B503 as seed ortholog is 100%.

Group of orthologs #1065. Best score 71 bits
Score difference with first non-orthologous sequence - P.knowlesi:71 P.pallidum:71

B3L3V0              	100.00%		D3B854              	100.00%
Bootstrap support for B3L3V0 as seed ortholog is 100%.
Bootstrap support for D3B854 as seed ortholog is 100%.

Group of orthologs #1066. Best score 71 bits
Score difference with first non-orthologous sequence - P.knowlesi:71 P.pallidum:71

B3LC45              	100.00%		D3B5U8              	100.00%
Bootstrap support for B3LC45 as seed ortholog is 100%.
Bootstrap support for D3B5U8 as seed ortholog is 100%.

Group of orthologs #1067. Best score 71 bits
Score difference with first non-orthologous sequence - P.knowlesi:71 P.pallidum:71

B3LD18              	100.00%		D3B873              	100.00%
Bootstrap support for B3LD18 as seed ortholog is 100%.
Bootstrap support for D3B873 as seed ortholog is 100%.

Group of orthologs #1068. Best score 71 bits
Score difference with first non-orthologous sequence - P.knowlesi:71 P.pallidum:71

B3L3R0              	100.00%		D3BN40              	100.00%
Bootstrap support for B3L3R0 as seed ortholog is 100%.
Bootstrap support for D3BN40 as seed ortholog is 100%.

Group of orthologs #1069. Best score 71 bits
Score difference with first non-orthologous sequence - P.knowlesi:71 P.pallidum:71

B3L8D6              	100.00%		D3BUQ1              	100.00%
Bootstrap support for B3L8D6 as seed ortholog is 100%.
Bootstrap support for D3BUQ1 as seed ortholog is 100%.

Group of orthologs #1070. Best score 70 bits
Score difference with first non-orthologous sequence - P.knowlesi:70 P.pallidum:70

B3L8C1              	100.00%		D3B155              	100.00%
                    	       		D3BJG7              	7.37%
Bootstrap support for B3L8C1 as seed ortholog is 100%.
Bootstrap support for D3B155 as seed ortholog is 100%.

Group of orthologs #1071. Best score 70 bits
Score difference with first non-orthologous sequence - P.knowlesi:70 P.pallidum:70

B3L0G4              	100.00%		D3B356              	100.00%
Bootstrap support for B3L0G4 as seed ortholog is 100%.
Bootstrap support for D3B356 as seed ortholog is 100%.

Group of orthologs #1072. Best score 70 bits
Score difference with first non-orthologous sequence - P.knowlesi:70 P.pallidum:70

B3L2I3              	100.00%		D3BU02              	100.00%
Bootstrap support for B3L2I3 as seed ortholog is 100%.
Bootstrap support for D3BU02 as seed ortholog is 100%.

Group of orthologs #1073. Best score 69 bits
Score difference with first non-orthologous sequence - P.knowlesi:11 P.pallidum:69

B3L664              	100.00%		D3B4Y1              	100.00%
                    	       		D3B1R8              	15.36%
                    	       		D3BL06              	10.97%
                    	       		D3BMB1              	9.19%
                    	       		D3AZH3              	5.49%
Bootstrap support for B3L664 as seed ortholog is 52%.
Alternative seed ortholog is B3LCA4 (11 bits away from this cluster)
Bootstrap support for D3B4Y1 as seed ortholog is 100%.

Group of orthologs #1074. Best score 69 bits
Score difference with first non-orthologous sequence - P.knowlesi:69 P.pallidum:69

B3L4I3              	100.00%		D3BDB6              	100.00%
                    	       		D3B7S8              	18.67%
Bootstrap support for B3L4I3 as seed ortholog is 100%.
Bootstrap support for D3BDB6 as seed ortholog is 100%.

Group of orthologs #1075. Best score 69 bits
Score difference with first non-orthologous sequence - P.knowlesi:69 P.pallidum:69

B3L2U0              	100.00%		D3B733              	100.00%
Bootstrap support for B3L2U0 as seed ortholog is 100%.
Bootstrap support for D3B733 as seed ortholog is 100%.

Group of orthologs #1076. Best score 69 bits
Score difference with first non-orthologous sequence - P.knowlesi:69 P.pallidum:69

B3L0J3              	100.00%		D3BL91              	100.00%
Bootstrap support for B3L0J3 as seed ortholog is 100%.
Bootstrap support for D3BL91 as seed ortholog is 100%.

Group of orthologs #1077. Best score 69 bits
Score difference with first non-orthologous sequence - P.knowlesi:69 P.pallidum:69

B3L5M1              	100.00%		D3BL09              	100.00%
Bootstrap support for B3L5M1 as seed ortholog is 100%.
Bootstrap support for D3BL09 as seed ortholog is 100%.

Group of orthologs #1078. Best score 68 bits
Score difference with first non-orthologous sequence - P.knowlesi:68 P.pallidum:68

B3LA74              	100.00%		D3BCT9              	100.00%
Bootstrap support for B3LA74 as seed ortholog is 100%.
Bootstrap support for D3BCT9 as seed ortholog is 100%.

Group of orthologs #1079. Best score 68 bits
Score difference with first non-orthologous sequence - P.knowlesi:68 P.pallidum:68

B3LB85              	100.00%		D3BVQ9              	100.00%
Bootstrap support for B3LB85 as seed ortholog is 100%.
Bootstrap support for D3BVQ9 as seed ortholog is 100%.

Group of orthologs #1080. Best score 67 bits
Score difference with first non-orthologous sequence - P.knowlesi:67 P.pallidum:67

B3KZ11              	100.00%		D3BD34              	100.00%
Bootstrap support for B3KZ11 as seed ortholog is 100%.
Bootstrap support for D3BD34 as seed ortholog is 100%.

Group of orthologs #1081. Best score 67 bits
Score difference with first non-orthologous sequence - P.knowlesi:67 P.pallidum:67

B3L4R5              	100.00%		D3BC06              	100.00%
Bootstrap support for B3L4R5 as seed ortholog is 100%.
Bootstrap support for D3BC06 as seed ortholog is 100%.

Group of orthologs #1082. Best score 67 bits
Score difference with first non-orthologous sequence - P.knowlesi:67 P.pallidum:67

B3L969              	100.00%		D3BE05              	100.00%
Bootstrap support for B3L969 as seed ortholog is 100%.
Bootstrap support for D3BE05 as seed ortholog is 100%.

Group of orthologs #1083. Best score 67 bits
Score difference with first non-orthologous sequence - P.knowlesi:67 P.pallidum:67

B3L262              	100.00%		D3BNN0              	100.00%
Bootstrap support for B3L262 as seed ortholog is 100%.
Bootstrap support for D3BNN0 as seed ortholog is 100%.

Group of orthologs #1084. Best score 67 bits
Score difference with first non-orthologous sequence - P.knowlesi:67 P.pallidum:67

B3L810              	100.00%		D3BHV3              	100.00%
Bootstrap support for B3L810 as seed ortholog is 100%.
Bootstrap support for D3BHV3 as seed ortholog is 100%.

Group of orthologs #1085. Best score 67 bits
Score difference with first non-orthologous sequence - P.knowlesi:67 P.pallidum:67

B3L9G1              	100.00%		D3BJI3              	100.00%
Bootstrap support for B3L9G1 as seed ortholog is 100%.
Bootstrap support for D3BJI3 as seed ortholog is 100%.

Group of orthologs #1086. Best score 67 bits
Score difference with first non-orthologous sequence - P.knowlesi:67 P.pallidum:67

B3LA12              	100.00%		D3BMQ0              	100.00%
Bootstrap support for B3LA12 as seed ortholog is 100%.
Bootstrap support for D3BMQ0 as seed ortholog is 100%.

Group of orthologs #1087. Best score 67 bits
Score difference with first non-orthologous sequence - P.knowlesi:5 P.pallidum:67

B3LAK8              	100.00%		D3BVK7              	100.00%
Bootstrap support for B3LAK8 as seed ortholog is 61%.
Alternative seed ortholog is B3LBL0 (5 bits away from this cluster)
Bootstrap support for D3BVK7 as seed ortholog is 100%.

Group of orthologs #1088. Best score 66 bits
Score difference with first non-orthologous sequence - P.knowlesi:66 P.pallidum:66

B3L790              	100.00%		D3AZM3              	100.00%
Bootstrap support for B3L790 as seed ortholog is 100%.
Bootstrap support for D3AZM3 as seed ortholog is 100%.

Group of orthologs #1089. Best score 66 bits
Score difference with first non-orthologous sequence - P.knowlesi:66 P.pallidum:66

B3L0T6              	100.00%		D3BBD7              	100.00%
Bootstrap support for B3L0T6 as seed ortholog is 100%.
Bootstrap support for D3BBD7 as seed ortholog is 100%.

Group of orthologs #1090. Best score 66 bits
Score difference with first non-orthologous sequence - P.knowlesi:66 P.pallidum:66

B3L525              	100.00%		D3B9F2              	100.00%
Bootstrap support for B3L525 as seed ortholog is 100%.
Bootstrap support for D3B9F2 as seed ortholog is 100%.

Group of orthologs #1091. Best score 66 bits
Score difference with first non-orthologous sequence - P.knowlesi:66 P.pallidum:66

B3L7W5              	100.00%		D3B7E8              	100.00%
Bootstrap support for B3L7W5 as seed ortholog is 100%.
Bootstrap support for D3B7E8 as seed ortholog is 100%.

Group of orthologs #1092. Best score 66 bits
Score difference with first non-orthologous sequence - P.knowlesi:66 P.pallidum:66

B3L091              	100.00%		D3BPE9              	100.00%
Bootstrap support for B3L091 as seed ortholog is 100%.
Bootstrap support for D3BPE9 as seed ortholog is 100%.

Group of orthologs #1093. Best score 66 bits
Score difference with first non-orthologous sequence - P.knowlesi:66 P.pallidum:66

B3L4J6              	100.00%		D3BRH7              	100.00%
Bootstrap support for B3L4J6 as seed ortholog is 100%.
Bootstrap support for D3BRH7 as seed ortholog is 100%.

Group of orthologs #1094. Best score 65 bits
Score difference with first non-orthologous sequence - P.knowlesi:65 P.pallidum:65

B3L8C3              	100.00%		D3AY65              	100.00%
Bootstrap support for B3L8C3 as seed ortholog is 100%.
Bootstrap support for D3AY65 as seed ortholog is 100%.

Group of orthologs #1095. Best score 65 bits
Score difference with first non-orthologous sequence - P.knowlesi:65 P.pallidum:65

B3L5S2              	100.00%		D3BN10              	100.00%
Bootstrap support for B3L5S2 as seed ortholog is 100%.
Bootstrap support for D3BN10 as seed ortholog is 100%.

Group of orthologs #1096. Best score 65 bits
Score difference with first non-orthologous sequence - P.knowlesi:65 P.pallidum:65

B3LCE8              	100.00%		D3BPK0              	100.00%
Bootstrap support for B3LCE8 as seed ortholog is 100%.
Bootstrap support for D3BPK0 as seed ortholog is 100%.

Group of orthologs #1097. Best score 64 bits
Score difference with first non-orthologous sequence - P.knowlesi:64 P.pallidum:64

B3L917              	100.00%		D3B9X2              	100.00%
                    	       		D3B410              	7.44%
Bootstrap support for B3L917 as seed ortholog is 100%.
Bootstrap support for D3B9X2 as seed ortholog is 100%.

Group of orthologs #1098. Best score 64 bits
Score difference with first non-orthologous sequence - P.knowlesi:64 P.pallidum:64

B3L1F0              	100.00%		D3BFN4              	100.00%
Bootstrap support for B3L1F0 as seed ortholog is 100%.
Bootstrap support for D3BFN4 as seed ortholog is 100%.

Group of orthologs #1099. Best score 64 bits
Score difference with first non-orthologous sequence - P.knowlesi:64 P.pallidum:64

B3L002              	100.00%		D3BJK9              	100.00%
Bootstrap support for B3L002 as seed ortholog is 100%.
Bootstrap support for D3BJK9 as seed ortholog is 100%.

Group of orthologs #1100. Best score 63 bits
Score difference with first non-orthologous sequence - P.knowlesi:63 P.pallidum:63

B3LBE0              	100.00%		D3AXS1              	100.00%
Bootstrap support for B3LBE0 as seed ortholog is 100%.
Bootstrap support for D3AXS1 as seed ortholog is 100%.

Group of orthologs #1101. Best score 63 bits
Score difference with first non-orthologous sequence - P.knowlesi:63 P.pallidum:63

B3LAQ2              	100.00%		D3B793              	100.00%
Bootstrap support for B3LAQ2 as seed ortholog is 100%.
Bootstrap support for D3B793 as seed ortholog is 100%.

Group of orthologs #1102. Best score 62 bits
Score difference with first non-orthologous sequence - P.knowlesi:62 P.pallidum:62

B3L7M3              	100.00%		D3B7L8              	100.00%
B3L8Y6              	34.97%		D3BQC7              	46.58%
B3L8Y3              	31.88%		D3BR71              	46.24%
Bootstrap support for B3L7M3 as seed ortholog is 100%.
Bootstrap support for D3B7L8 as seed ortholog is 100%.

Group of orthologs #1103. Best score 62 bits
Score difference with first non-orthologous sequence - P.knowlesi:62 P.pallidum:62

B3L5J3              	100.00%		D3B9M8              	100.00%
Bootstrap support for B3L5J3 as seed ortholog is 100%.
Bootstrap support for D3B9M8 as seed ortholog is 100%.

Group of orthologs #1104. Best score 62 bits
Score difference with first non-orthologous sequence - P.knowlesi:62 P.pallidum:62

B3L7N4              	100.00%		D3BDZ5              	100.00%
Bootstrap support for B3L7N4 as seed ortholog is 100%.
Bootstrap support for D3BDZ5 as seed ortholog is 100%.

Group of orthologs #1105. Best score 62 bits
Score difference with first non-orthologous sequence - P.knowlesi:62 P.pallidum:5

B3L6A9              	100.00%		D3BFD9              	100.00%
Bootstrap support for B3L6A9 as seed ortholog is 100%.
Bootstrap support for D3BFD9 as seed ortholog is 65%.
Alternative seed ortholog is D3B3Z9 (5 bits away from this cluster)

Group of orthologs #1106. Best score 61 bits
Score difference with first non-orthologous sequence - P.knowlesi:61 P.pallidum:9

B3L3P5              	100.00%		D3B5D3              	100.00%
                    	       		D3BU78              	100.00%
                    	       		D3BMT2              	12.08%
Bootstrap support for B3L3P5 as seed ortholog is 100%.
Bootstrap support for D3B5D3 as seed ortholog is 67%.
Alternative seed ortholog is D3BEH5 (9 bits away from this cluster)
Bootstrap support for D3BU78 as seed ortholog is 67%.
Alternative seed ortholog is D3BEH5 (9 bits away from this cluster)

Group of orthologs #1107. Best score 61 bits
Score difference with first non-orthologous sequence - P.knowlesi:61 P.pallidum:61

B3LD71              	100.00%		D3BFR6              	100.00%
                    	       		D3BRT3              	22.76%
Bootstrap support for B3LD71 as seed ortholog is 100%.
Bootstrap support for D3BFR6 as seed ortholog is 100%.

Group of orthologs #1108. Best score 61 bits
Score difference with first non-orthologous sequence - P.knowlesi:61 P.pallidum:61

B3L9W2              	100.00%		D3AWT5              	100.00%
Bootstrap support for B3L9W2 as seed ortholog is 100%.
Bootstrap support for D3AWT5 as seed ortholog is 100%.

Group of orthologs #1109. Best score 61 bits
Score difference with first non-orthologous sequence - P.knowlesi:61 P.pallidum:61

B3L617              	100.00%		D3BAA6              	100.00%
Bootstrap support for B3L617 as seed ortholog is 100%.
Bootstrap support for D3BAA6 as seed ortholog is 100%.

Group of orthologs #1110. Best score 61 bits
Score difference with first non-orthologous sequence - P.knowlesi:9 P.pallidum:61

B3L3Q2              	100.00%		D3BPE0              	100.00%
Bootstrap support for B3L3Q2 as seed ortholog is 56%.
Alternative seed ortholog is B3L5W1 (9 bits away from this cluster)
Bootstrap support for D3BPE0 as seed ortholog is 100%.

Group of orthologs #1111. Best score 61 bits
Score difference with first non-orthologous sequence - P.knowlesi:61 P.pallidum:61

B3L5K4              	100.00%		D3BSK2              	100.00%
Bootstrap support for B3L5K4 as seed ortholog is 100%.
Bootstrap support for D3BSK2 as seed ortholog is 100%.

Group of orthologs #1112. Best score 60 bits
Score difference with first non-orthologous sequence - P.knowlesi:60 P.pallidum:60

B3L7W4              	100.00%		D3BAD3              	100.00%
                    	       		D3BI35              	20.17%
                    	       		D3AVV7              	19.47%
Bootstrap support for B3L7W4 as seed ortholog is 100%.
Bootstrap support for D3BAD3 as seed ortholog is 100%.

Group of orthologs #1113. Best score 60 bits
Score difference with first non-orthologous sequence - P.knowlesi:60 P.pallidum:60

B3L3D3              	100.00%		D3B0E9              	100.00%
Bootstrap support for B3L3D3 as seed ortholog is 100%.
Bootstrap support for D3B0E9 as seed ortholog is 100%.

Group of orthologs #1114. Best score 60 bits
Score difference with first non-orthologous sequence - P.knowlesi:3 P.pallidum:60

B3L548              	100.00%		D3B0J7              	100.00%
Bootstrap support for B3L548 as seed ortholog is 54%.
Alternative seed ortholog is B3L0Z6 (3 bits away from this cluster)
Bootstrap support for D3B0J7 as seed ortholog is 100%.

Group of orthologs #1115. Best score 59 bits
Score difference with first non-orthologous sequence - P.knowlesi:59 P.pallidum:59

B3L5D6              	100.00%		D3BAX0              	100.00%
                    	       		D3BRS7              	9.11%
                    	       		D3BQ27              	6.83%
Bootstrap support for B3L5D6 as seed ortholog is 100%.
Bootstrap support for D3BAX0 as seed ortholog is 100%.

Group of orthologs #1116. Best score 59 bits
Score difference with first non-orthologous sequence - P.knowlesi:59 P.pallidum:59

B3L8T8              	100.00%		D3BRV0              	100.00%
B3LBG1              	8.27%		
B3KZH1              	5.11%		
Bootstrap support for B3L8T8 as seed ortholog is 100%.
Bootstrap support for D3BRV0 as seed ortholog is 100%.

Group of orthologs #1117. Best score 59 bits
Score difference with first non-orthologous sequence - P.knowlesi:59 P.pallidum:59

B3LBV9              	100.00%		D3B7N4              	100.00%
                    	       		D3BM15              	10.27%
Bootstrap support for B3LBV9 as seed ortholog is 100%.
Bootstrap support for D3B7N4 as seed ortholog is 100%.

Group of orthologs #1118. Best score 59 bits
Score difference with first non-orthologous sequence - P.knowlesi:59 P.pallidum:59

B3L5I9              	100.00%		D3AVN0              	100.00%
Bootstrap support for B3L5I9 as seed ortholog is 100%.
Bootstrap support for D3AVN0 as seed ortholog is 100%.

Group of orthologs #1119. Best score 59 bits
Score difference with first non-orthologous sequence - P.knowlesi:59 P.pallidum:59

B3L2E3              	100.00%		D3B7J8              	100.00%
Bootstrap support for B3L2E3 as seed ortholog is 100%.
Bootstrap support for D3B7J8 as seed ortholog is 100%.

Group of orthologs #1120. Best score 59 bits
Score difference with first non-orthologous sequence - P.knowlesi:59 P.pallidum:59

B3LA32              	100.00%		D3BGG8              	100.00%
Bootstrap support for B3LA32 as seed ortholog is 100%.
Bootstrap support for D3BGG8 as seed ortholog is 100%.

Group of orthologs #1121. Best score 59 bits
Score difference with first non-orthologous sequence - P.knowlesi:59 P.pallidum:59

B3LBM7              	100.00%		D3BF90              	100.00%
Bootstrap support for B3LBM7 as seed ortholog is 100%.
Bootstrap support for D3BF90 as seed ortholog is 100%.

Group of orthologs #1122. Best score 58 bits
Score difference with first non-orthologous sequence - P.knowlesi:58 P.pallidum:58

B3L9U0              	100.00%		D3BR01              	100.00%
B3LBA8              	86.68%		D3BR00              	69.29%
Bootstrap support for B3L9U0 as seed ortholog is 100%.
Bootstrap support for D3BR01 as seed ortholog is 100%.

Group of orthologs #1123. Best score 58 bits
Score difference with first non-orthologous sequence - P.knowlesi:8 P.pallidum:58

B3LAB6              	100.00%		D3B9L3              	100.00%
B3LBK3              	6.44%		
Bootstrap support for B3LAB6 as seed ortholog is 87%.
Bootstrap support for D3B9L3 as seed ortholog is 100%.

Group of orthologs #1124. Best score 58 bits
Score difference with first non-orthologous sequence - P.knowlesi:58 P.pallidum:58

B3KZ04              	100.00%		D3B2B2              	100.00%
Bootstrap support for B3KZ04 as seed ortholog is 100%.
Bootstrap support for D3B2B2 as seed ortholog is 100%.

Group of orthologs #1125. Best score 58 bits
Score difference with first non-orthologous sequence - P.knowlesi:58 P.pallidum:58

B3L8H2              	100.00%		D3BDM9              	100.00%
Bootstrap support for B3L8H2 as seed ortholog is 100%.
Bootstrap support for D3BDM9 as seed ortholog is 100%.

Group of orthologs #1126. Best score 57 bits
Score difference with first non-orthologous sequence - P.knowlesi:57 P.pallidum:57

B3KZF6              	100.00%		D3BAQ1              	100.00%
Bootstrap support for B3KZF6 as seed ortholog is 100%.
Bootstrap support for D3BAQ1 as seed ortholog is 100%.

Group of orthologs #1127. Best score 57 bits
Score difference with first non-orthologous sequence - P.knowlesi:57 P.pallidum:6

B3LBV3              	100.00%		D3B1A9              	100.00%
Bootstrap support for B3LBV3 as seed ortholog is 100%.
Bootstrap support for D3B1A9 as seed ortholog is 53%.
Alternative seed ortholog is D3B406 (6 bits away from this cluster)

Group of orthologs #1128. Best score 57 bits
Score difference with first non-orthologous sequence - P.knowlesi:57 P.pallidum:57

B3L7J5              	100.00%		D3B734              	100.00%
Bootstrap support for B3L7J5 as seed ortholog is 100%.
Bootstrap support for D3B734 as seed ortholog is 100%.

Group of orthologs #1129. Best score 57 bits
Score difference with first non-orthologous sequence - P.knowlesi:57 P.pallidum:57

B3L4Z3              	100.00%		D3BF67              	100.00%
Bootstrap support for B3L4Z3 as seed ortholog is 100%.
Bootstrap support for D3BF67 as seed ortholog is 100%.

Group of orthologs #1130. Best score 57 bits
Score difference with first non-orthologous sequence - P.knowlesi:57 P.pallidum:57

B3L4P5              	100.00%		D3BH64              	100.00%
Bootstrap support for B3L4P5 as seed ortholog is 100%.
Bootstrap support for D3BH64 as seed ortholog is 100%.

Group of orthologs #1131. Best score 57 bits
Score difference with first non-orthologous sequence - P.knowlesi:57 P.pallidum:57

B3L376              	100.00%		D3BL89              	100.00%
Bootstrap support for B3L376 as seed ortholog is 100%.
Bootstrap support for D3BL89 as seed ortholog is 100%.

Group of orthologs #1132. Best score 56 bits
Score difference with first non-orthologous sequence - P.knowlesi:56 P.pallidum:56

B3KZ35              	100.00%		D3B5S8              	100.00%
Bootstrap support for B3KZ35 as seed ortholog is 100%.
Bootstrap support for D3B5S8 as seed ortholog is 100%.

Group of orthologs #1133. Best score 56 bits
Score difference with first non-orthologous sequence - P.knowlesi:56 P.pallidum:56

B3L493              	100.00%		D3B6R0              	100.00%
Bootstrap support for B3L493 as seed ortholog is 100%.
Bootstrap support for D3B6R0 as seed ortholog is 100%.

Group of orthologs #1134. Best score 56 bits
Score difference with first non-orthologous sequence - P.knowlesi:56 P.pallidum:56

B3LBG4              	100.00%		D3BAU4              	100.00%
Bootstrap support for B3LBG4 as seed ortholog is 100%.
Bootstrap support for D3BAU4 as seed ortholog is 100%.

Group of orthologs #1135. Best score 56 bits
Score difference with first non-orthologous sequence - P.knowlesi:56 P.pallidum:56

B3L5S8              	100.00%		D3BU60              	100.00%
Bootstrap support for B3L5S8 as seed ortholog is 100%.
Bootstrap support for D3BU60 as seed ortholog is 100%.

Group of orthologs #1136. Best score 55 bits
Score difference with first non-orthologous sequence - P.knowlesi:55 P.pallidum:55

B3L7D3              	100.00%		D3BFK4              	100.00%
Bootstrap support for B3L7D3 as seed ortholog is 100%.
Bootstrap support for D3BFK4 as seed ortholog is 100%.

Group of orthologs #1137. Best score 54 bits
Score difference with first non-orthologous sequence - P.knowlesi:54 P.pallidum:54

B3LBP3              	100.00%		D3BED0              	100.00%
Bootstrap support for B3LBP3 as seed ortholog is 100%.
Bootstrap support for D3BED0 as seed ortholog is 100%.

Group of orthologs #1138. Best score 53 bits
Score difference with first non-orthologous sequence - P.knowlesi:53 P.pallidum:53

B3L2J9              	100.00%		D3AXL9              	100.00%
Bootstrap support for B3L2J9 as seed ortholog is 100%.
Bootstrap support for D3AXL9 as seed ortholog is 100%.

Group of orthologs #1139. Best score 53 bits
Score difference with first non-orthologous sequence - P.knowlesi:53 P.pallidum:53

B3L481              	100.00%		D3BI13              	100.00%
Bootstrap support for B3L481 as seed ortholog is 100%.
Bootstrap support for D3BI13 as seed ortholog is 100%.

Group of orthologs #1140. Best score 52 bits
Score difference with first non-orthologous sequence - P.knowlesi:52 P.pallidum:52

B3L8Z1              	100.00%		D3B6Z4              	100.00%
Bootstrap support for B3L8Z1 as seed ortholog is 100%.
Bootstrap support for D3B6Z4 as seed ortholog is 100%.

Group of orthologs #1141. Best score 52 bits
Score difference with first non-orthologous sequence - P.knowlesi:52 P.pallidum:52

B3LB24              	100.00%		D3B5K9              	100.00%
Bootstrap support for B3LB24 as seed ortholog is 100%.
Bootstrap support for D3B5K9 as seed ortholog is 100%.

Group of orthologs #1142. Best score 52 bits
Score difference with first non-orthologous sequence - P.knowlesi:52 P.pallidum:52

B3LCI7              	100.00%		D3BIU2              	100.00%
Bootstrap support for B3LCI7 as seed ortholog is 100%.
Bootstrap support for D3BIU2 as seed ortholog is 100%.

Group of orthologs #1143. Best score 52 bits
Score difference with first non-orthologous sequence - P.knowlesi:52 P.pallidum:52

B3LAD0              	100.00%		D3BM04              	100.00%
Bootstrap support for B3LAD0 as seed ortholog is 100%.
Bootstrap support for D3BM04 as seed ortholog is 100%.

Group of orthologs #1144. Best score 51 bits
Score difference with first non-orthologous sequence - P.knowlesi:51 P.pallidum:51

B3KZF7              	100.00%		D3B0B3              	100.00%
                    	       		D3BS37              	6.31%
Bootstrap support for B3KZF7 as seed ortholog is 100%.
Bootstrap support for D3B0B3 as seed ortholog is 100%.

Group of orthologs #1145. Best score 51 bits
Score difference with first non-orthologous sequence - P.knowlesi:51 P.pallidum:51

B3L9B6              	100.00%		D3B6T9              	100.00%
Bootstrap support for B3L9B6 as seed ortholog is 100%.
Bootstrap support for D3B6T9 as seed ortholog is 100%.

Group of orthologs #1146. Best score 51 bits
Score difference with first non-orthologous sequence - P.knowlesi:51 P.pallidum:51

B3L2R0              	100.00%		D3BND9              	100.00%
Bootstrap support for B3L2R0 as seed ortholog is 100%.
Bootstrap support for D3BND9 as seed ortholog is 100%.

Group of orthologs #1147. Best score 51 bits
Score difference with first non-orthologous sequence - P.knowlesi:51 P.pallidum:51

B3L9H2              	100.00%		D3BHG7              	100.00%
Bootstrap support for B3L9H2 as seed ortholog is 100%.
Bootstrap support for D3BHG7 as seed ortholog is 100%.

Group of orthologs #1148. Best score 51 bits
Score difference with first non-orthologous sequence - P.knowlesi:51 P.pallidum:51

B3LB73              	100.00%		D3BKA6              	100.00%
Bootstrap support for B3LB73 as seed ortholog is 100%.
Bootstrap support for D3BKA6 as seed ortholog is 100%.

Group of orthologs #1149. Best score 50 bits
Score difference with first non-orthologous sequence - P.knowlesi:50 P.pallidum:50

B3KZ62              	100.00%		D3B4H4              	100.00%
Bootstrap support for B3KZ62 as seed ortholog is 100%.
Bootstrap support for D3B4H4 as seed ortholog is 100%.

Group of orthologs #1150. Best score 49 bits
Score difference with first non-orthologous sequence - P.knowlesi:49 P.pallidum:49

B3L577              	100.00%		D3B9A6              	100.00%
Bootstrap support for B3L577 as seed ortholog is 100%.
Bootstrap support for D3B9A6 as seed ortholog is 100%.

Group of orthologs #1151. Best score 49 bits
Score difference with first non-orthologous sequence - P.knowlesi:49 P.pallidum:49

B3L3L6              	100.00%		D3BUT8              	100.00%
Bootstrap support for B3L3L6 as seed ortholog is 100%.
Bootstrap support for D3BUT8 as seed ortholog is 100%.

Group of orthologs #1152. Best score 49 bits
Score difference with first non-orthologous sequence - P.knowlesi:49 P.pallidum:49

B3L5H9              	100.00%		D3BTX3              	100.00%
Bootstrap support for B3L5H9 as seed ortholog is 100%.
Bootstrap support for D3BTX3 as seed ortholog is 100%.

Group of orthologs #1153. Best score 48 bits
Score difference with first non-orthologous sequence - P.knowlesi:48 P.pallidum:48

B3L2G4              	100.00%		D3BJ70              	100.00%
                    	       		D3BMX1              	24.26%
                    	       		D3BTA0              	14.71%
                    	       		D3BL98              	9.74%
Bootstrap support for B3L2G4 as seed ortholog is 100%.
Bootstrap support for D3BJ70 as seed ortholog is 100%.

Group of orthologs #1154. Best score 48 bits
Score difference with first non-orthologous sequence - P.knowlesi:4 P.pallidum:48

B3L0R8              	100.00%		D3AVK7              	100.00%
Bootstrap support for B3L0R8 as seed ortholog is 62%.
Alternative seed ortholog is B3LB70 (4 bits away from this cluster)
Bootstrap support for D3AVK7 as seed ortholog is 100%.

Group of orthologs #1155. Best score 48 bits
Score difference with first non-orthologous sequence - P.knowlesi:48 P.pallidum:48

B3LC52              	100.00%		D3BSC4              	100.00%
Bootstrap support for B3LC52 as seed ortholog is 100%.
Bootstrap support for D3BSC4 as seed ortholog is 100%.

Group of orthologs #1156. Best score 47 bits
Score difference with first non-orthologous sequence - P.knowlesi:47 P.pallidum:47

B3L3K1              	100.00%		D3B5I0              	100.00%
Bootstrap support for B3L3K1 as seed ortholog is 100%.
Bootstrap support for D3B5I0 as seed ortholog is 100%.

Group of orthologs #1157. Best score 47 bits
Score difference with first non-orthologous sequence - P.knowlesi:47 P.pallidum:47

B3L3P0              	100.00%		D3BEI4              	100.00%
Bootstrap support for B3L3P0 as seed ortholog is 100%.
Bootstrap support for D3BEI4 as seed ortholog is 100%.

Group of orthologs #1158. Best score 47 bits
Score difference with first non-orthologous sequence - P.knowlesi:47 P.pallidum:47

B3L0B9              	100.00%		D3BJL0              	100.00%
Bootstrap support for B3L0B9 as seed ortholog is 100%.
Bootstrap support for D3BJL0 as seed ortholog is 100%.

Group of orthologs #1159. Best score 47 bits
Score difference with first non-orthologous sequence - P.knowlesi:47 P.pallidum:47

B3L8R0              	100.00%		D3BCL9              	100.00%
Bootstrap support for B3L8R0 as seed ortholog is 100%.
Bootstrap support for D3BCL9 as seed ortholog is 100%.

Group of orthologs #1160. Best score 47 bits
Score difference with first non-orthologous sequence - P.knowlesi:47 P.pallidum:47

B3LCA9              	100.00%		D3BG33              	100.00%
Bootstrap support for B3LCA9 as seed ortholog is 100%.
Bootstrap support for D3BG33 as seed ortholog is 100%.

Group of orthologs #1161. Best score 44 bits
Score difference with first non-orthologous sequence - P.knowlesi:44 P.pallidum:44

B3L399              	100.00%		D3BNI5              	100.00%
Bootstrap support for B3L399 as seed ortholog is 100%.
Bootstrap support for D3BNI5 as seed ortholog is 100%.

Group of orthologs #1162. Best score 43 bits
Score difference with first non-orthologous sequence - P.knowlesi:43 P.pallidum:43

B3L953              	100.00%		D3BNQ6              	100.00%
Bootstrap support for B3L953 as seed ortholog is 100%.
Bootstrap support for D3BNQ6 as seed ortholog is 100%.

Group of orthologs #1163. Best score 41 bits
Score difference with first non-orthologous sequence - P.knowlesi:41 P.pallidum:41

B3LC49              	100.00%		D3AYF0              	100.00%
Bootstrap support for B3LC49 as seed ortholog is 100%.
Bootstrap support for D3AYF0 as seed ortholog is 100%.

Group of orthologs #1164. Best score 41 bits
Score difference with first non-orthologous sequence - P.knowlesi:41 P.pallidum:41

B3LAR5              	100.00%		D3B129              	100.00%
Bootstrap support for B3LAR5 as seed ortholog is 100%.
Bootstrap support for D3B129 as seed ortholog is 100%.