###################################
247 groups of orthologs
274 in-paralogs from P.knowlesi
297 in-paralogs from P.kodakaraensis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 811 bits
Score difference with first non-orthologous sequence - P.knowlesi:75 P.kodakaraensis:811

B3L0J5              	100.00%		Q5JE32              	100.00%
Bootstrap support for B3L0J5 as seed ortholog is 83%.
Bootstrap support for Q5JE32 as seed ortholog is 100%.

Group of orthologs #2. Best score 557 bits
Score difference with first non-orthologous sequence - P.knowlesi:421 P.kodakaraensis:557

B3KZZ1              	100.00%		Q5JIR2              	100.00%
Bootstrap support for B3KZZ1 as seed ortholog is 100%.
Bootstrap support for Q5JIR2 as seed ortholog is 100%.

Group of orthologs #3. Best score 555 bits
Score difference with first non-orthologous sequence - P.knowlesi:450 P.kodakaraensis:555

B3LBT4              	100.00%		Q5JIR3              	100.00%
Bootstrap support for B3LBT4 as seed ortholog is 100%.
Bootstrap support for Q5JIR3 as seed ortholog is 100%.

Group of orthologs #4. Best score 514 bits
Score difference with first non-orthologous sequence - P.knowlesi:407 P.kodakaraensis:451

B3L6T7              	100.00%		Q5JDX6              	100.00%
Bootstrap support for B3L6T7 as seed ortholog is 100%.
Bootstrap support for Q5JDX6 as seed ortholog is 100%.

Group of orthologs #5. Best score 477 bits
Score difference with first non-orthologous sequence - P.knowlesi:226 P.kodakaraensis:477

B3L8Q4              	100.00%		Q5JJ31              	100.00%
Bootstrap support for B3L8Q4 as seed ortholog is 99%.
Bootstrap support for Q5JJ31 as seed ortholog is 100%.

Group of orthologs #6. Best score 463 bits
Score difference with first non-orthologous sequence - P.knowlesi:205 P.kodakaraensis:463

B3L753              	100.00%		Q5JFZ4              	100.00%
Bootstrap support for B3L753 as seed ortholog is 100%.
Bootstrap support for Q5JFZ4 as seed ortholog is 100%.

Group of orthologs #7. Best score 457 bits
Score difference with first non-orthologous sequence - P.knowlesi:457 P.kodakaraensis:361

B3L3V4              	100.00%		Q5JEV6              	100.00%
Bootstrap support for B3L3V4 as seed ortholog is 100%.
Bootstrap support for Q5JEV6 as seed ortholog is 100%.

Group of orthologs #8. Best score 453 bits
Score difference with first non-orthologous sequence - P.knowlesi:453 P.kodakaraensis:453

B3LAR4              	100.00%		Q5JGF1              	100.00%
Bootstrap support for B3LAR4 as seed ortholog is 100%.
Bootstrap support for Q5JGF1 as seed ortholog is 100%.

Group of orthologs #9. Best score 445 bits
Score difference with first non-orthologous sequence - P.knowlesi:339 P.kodakaraensis:445

B3L4K9              	100.00%		Q5JCZ1              	100.00%
Bootstrap support for B3L4K9 as seed ortholog is 100%.
Bootstrap support for Q5JCZ1 as seed ortholog is 100%.

Group of orthologs #10. Best score 393 bits
Score difference with first non-orthologous sequence - P.knowlesi:23 P.kodakaraensis:393

B3L402              	100.00%		P61111              	100.00%
                    	       		Q52500              	70.95%
Bootstrap support for B3L402 as seed ortholog is 70%.
Alternative seed ortholog is B3LCT4 (23 bits away from this cluster)
Bootstrap support for P61111 as seed ortholog is 100%.

Group of orthologs #11. Best score 378 bits
Score difference with first non-orthologous sequence - P.knowlesi:37 P.kodakaraensis:378

B3L6Z9              	100.00%		Q5JGE5              	100.00%
Bootstrap support for B3L6Z9 as seed ortholog is 80%.
Bootstrap support for Q5JGE5 as seed ortholog is 100%.

Group of orthologs #12. Best score 376 bits
Score difference with first non-orthologous sequence - P.knowlesi:376 P.kodakaraensis:376

B3L212              	100.00%		Q5JH71              	100.00%
Bootstrap support for B3L212 as seed ortholog is 100%.
Bootstrap support for Q5JH71 as seed ortholog is 100%.

Group of orthologs #13. Best score 376 bits
Score difference with first non-orthologous sequence - P.knowlesi:376 P.kodakaraensis:376

B3L6H5              	100.00%		Q5JE33              	100.00%
Bootstrap support for B3L6H5 as seed ortholog is 100%.
Bootstrap support for Q5JE33 as seed ortholog is 100%.

Group of orthologs #14. Best score 368 bits
Score difference with first non-orthologous sequence - P.knowlesi:264 P.kodakaraensis:195

B3L9R6              	100.00%		Q5JJC8              	100.00%
Bootstrap support for B3L9R6 as seed ortholog is 100%.
Bootstrap support for Q5JJC8 as seed ortholog is 100%.

Group of orthologs #15. Best score 360 bits
Score difference with first non-orthologous sequence - P.knowlesi:117 P.kodakaraensis:360

B3L9Q6              	100.00%		Q5JFZ3              	100.00%
Bootstrap support for B3L9Q6 as seed ortholog is 99%.
Bootstrap support for Q5JFZ3 as seed ortholog is 100%.

Group of orthologs #16. Best score 358 bits
Score difference with first non-orthologous sequence - P.knowlesi:88 P.kodakaraensis:248

B3LC00              	100.00%		Q5JJA2              	100.00%
Bootstrap support for B3LC00 as seed ortholog is 88%.
Bootstrap support for Q5JJA2 as seed ortholog is 100%.

Group of orthologs #17. Best score 357 bits
Score difference with first non-orthologous sequence - P.knowlesi:223 P.kodakaraensis:357

B3LAR0              	100.00%		Q5JDL3              	100.00%
Bootstrap support for B3LAR0 as seed ortholog is 100%.
Bootstrap support for Q5JDL3 as seed ortholog is 100%.

Group of orthologs #18. Best score 356 bits
Score difference with first non-orthologous sequence - P.knowlesi:356 P.kodakaraensis:356

B3L878              	100.00%		O93623              	100.00%
Bootstrap support for B3L878 as seed ortholog is 100%.
Bootstrap support for O93623 as seed ortholog is 100%.

Group of orthologs #19. Best score 356 bits
Score difference with first non-orthologous sequence - P.knowlesi:9 P.kodakaraensis:356

B3L3L7              	100.00%		Q5JHS5              	100.00%
Bootstrap support for B3L3L7 as seed ortholog is 57%.
Alternative seed ortholog is B3LBM5 (9 bits away from this cluster)
Bootstrap support for Q5JHS5 as seed ortholog is 100%.

Group of orthologs #20. Best score 327 bits
Score difference with first non-orthologous sequence - P.knowlesi:327 P.kodakaraensis:327

B3LAH4              	100.00%		Q5JID8              	100.00%
Bootstrap support for B3LAH4 as seed ortholog is 100%.
Bootstrap support for Q5JID8 as seed ortholog is 100%.

Group of orthologs #21. Best score 323 bits
Score difference with first non-orthologous sequence - P.knowlesi:323 P.kodakaraensis:323

B3L3U5              	100.00%		Q5JD45              	100.00%
Bootstrap support for B3L3U5 as seed ortholog is 100%.
Bootstrap support for Q5JD45 as seed ortholog is 100%.

Group of orthologs #22. Best score 319 bits
Score difference with first non-orthologous sequence - P.knowlesi:319 P.kodakaraensis:319

B3L8D7              	100.00%		Q5JJH1              	100.00%
Bootstrap support for B3L8D7 as seed ortholog is 100%.
Bootstrap support for Q5JJH1 as seed ortholog is 100%.

Group of orthologs #23. Best score 306 bits
Score difference with first non-orthologous sequence - P.knowlesi:306 P.kodakaraensis:306

B3LCD4              	100.00%		Q5JF49              	100.00%
Bootstrap support for B3LCD4 as seed ortholog is 100%.
Bootstrap support for Q5JF49 as seed ortholog is 100%.

Group of orthologs #24. Best score 301 bits
Score difference with first non-orthologous sequence - P.knowlesi:39 P.kodakaraensis:301

B3L7D9              	100.00%		Q76I93              	100.00%
Bootstrap support for B3L7D9 as seed ortholog is 86%.
Bootstrap support for Q76I93 as seed ortholog is 100%.

Group of orthologs #25. Best score 300 bits
Score difference with first non-orthologous sequence - P.knowlesi:20 P.kodakaraensis:300

B3L776              	100.00%		Q5JIT1              	100.00%
                    	       		Q5JGW1              	5.30%
                    	       		Q5JEJ0              	5.20%
Bootstrap support for B3L776 as seed ortholog is 92%.
Bootstrap support for Q5JIT1 as seed ortholog is 100%.

Group of orthologs #26. Best score 298 bits
Score difference with first non-orthologous sequence - P.knowlesi:189 P.kodakaraensis:298

B3L9E5              	100.00%		Q5JGN7              	100.00%
Bootstrap support for B3L9E5 as seed ortholog is 99%.
Bootstrap support for Q5JGN7 as seed ortholog is 100%.

Group of orthologs #27. Best score 293 bits
Score difference with first non-orthologous sequence - P.knowlesi:293 P.kodakaraensis:293

B3L7J6              	100.00%		Q5JFR1              	100.00%
Bootstrap support for B3L7J6 as seed ortholog is 100%.
Bootstrap support for Q5JFR1 as seed ortholog is 100%.

Group of orthologs #28. Best score 289 bits
Score difference with first non-orthologous sequence - P.knowlesi:289 P.kodakaraensis:289

B3L8M2              	100.00%		Q5JEP3              	100.00%
Bootstrap support for B3L8M2 as seed ortholog is 100%.
Bootstrap support for Q5JEP3 as seed ortholog is 100%.

Group of orthologs #29. Best score 284 bits
Score difference with first non-orthologous sequence - P.knowlesi:284 P.kodakaraensis:284

B3L654              	100.00%		Q5JED2              	100.00%
Bootstrap support for B3L654 as seed ortholog is 100%.
Bootstrap support for Q5JED2 as seed ortholog is 100%.

Group of orthologs #30. Best score 282 bits
Score difference with first non-orthologous sequence - P.knowlesi:282 P.kodakaraensis:282

B3L3R6              	100.00%		Q5JFM1              	100.00%
Bootstrap support for B3L3R6 as seed ortholog is 100%.
Bootstrap support for Q5JFM1 as seed ortholog is 100%.

Group of orthologs #31. Best score 274 bits
Score difference with first non-orthologous sequence - P.knowlesi:112 P.kodakaraensis:274

B3L070              	100.00%		Q5JE75              	100.00%
Bootstrap support for B3L070 as seed ortholog is 98%.
Bootstrap support for Q5JE75 as seed ortholog is 100%.

Group of orthologs #32. Best score 274 bits
Score difference with first non-orthologous sequence - P.knowlesi:274 P.kodakaraensis:182

B3L1D8              	100.00%		Q5JET4              	100.00%
Bootstrap support for B3L1D8 as seed ortholog is 100%.
Bootstrap support for Q5JET4 as seed ortholog is 100%.

Group of orthologs #33. Best score 268 bits
Score difference with first non-orthologous sequence - P.knowlesi:268 P.kodakaraensis:268

B3L7I1              	100.00%		Q8NKR7              	100.00%
Bootstrap support for B3L7I1 as seed ortholog is 100%.
Bootstrap support for Q8NKR7 as seed ortholog is 100%.

Group of orthologs #34. Best score 265 bits
Score difference with first non-orthologous sequence - P.knowlesi:265 P.kodakaraensis:265

B3LAJ1              	100.00%		Q5JJE8              	100.00%
Bootstrap support for B3LAJ1 as seed ortholog is 100%.
Bootstrap support for Q5JJE8 as seed ortholog is 100%.

Group of orthologs #35. Best score 257 bits
Score difference with first non-orthologous sequence - P.knowlesi:257 P.kodakaraensis:257

B3L2M5              	100.00%		Q5JFM0              	100.00%
Bootstrap support for B3L2M5 as seed ortholog is 100%.
Bootstrap support for Q5JFM0 as seed ortholog is 100%.

Group of orthologs #36. Best score 251 bits
Score difference with first non-orthologous sequence - P.knowlesi:251 P.kodakaraensis:251

B3L0N2              	100.00%		Q5JGK6              	100.00%
Bootstrap support for B3L0N2 as seed ortholog is 100%.
Bootstrap support for Q5JGK6 as seed ortholog is 100%.

Group of orthologs #37. Best score 249 bits
Score difference with first non-orthologous sequence - P.knowlesi:249 P.kodakaraensis:249

B3LAN9              	100.00%		Q5JEY0              	100.00%
Bootstrap support for B3LAN9 as seed ortholog is 100%.
Bootstrap support for Q5JEY0 as seed ortholog is 100%.

Group of orthologs #38. Best score 246 bits
Score difference with first non-orthologous sequence - P.knowlesi:162 P.kodakaraensis:246

B3L0N7              	100.00%		Q5JHC1              	100.00%
B3L6H3              	9.32%		
Bootstrap support for B3L0N7 as seed ortholog is 98%.
Bootstrap support for Q5JHC1 as seed ortholog is 100%.

Group of orthologs #39. Best score 244 bits
Score difference with first non-orthologous sequence - P.knowlesi:111 P.kodakaraensis:244

B3KZP7              	100.00%		Q52428              	100.00%
Bootstrap support for B3KZP7 as seed ortholog is 99%.
Bootstrap support for Q52428 as seed ortholog is 100%.

Group of orthologs #40. Best score 244 bits
Score difference with first non-orthologous sequence - P.knowlesi:244 P.kodakaraensis:244

B3L4J2              	100.00%		Q76KA7              	100.00%
Bootstrap support for B3L4J2 as seed ortholog is 100%.
Bootstrap support for Q76KA7 as seed ortholog is 100%.

Group of orthologs #41. Best score 244 bits
Score difference with first non-orthologous sequence - P.knowlesi:244 P.kodakaraensis:244

B3LBC1              	100.00%		Q5JJ43              	100.00%
Bootstrap support for B3LBC1 as seed ortholog is 100%.
Bootstrap support for Q5JJ43 as seed ortholog is 100%.

Group of orthologs #42. Best score 243 bits
Score difference with first non-orthologous sequence - P.knowlesi:243 P.kodakaraensis:243

B3L7H9              	100.00%		Q5JFT4              	100.00%
Bootstrap support for B3L7H9 as seed ortholog is 100%.
Bootstrap support for Q5JFT4 as seed ortholog is 100%.

Group of orthologs #43. Best score 243 bits
Score difference with first non-orthologous sequence - P.knowlesi:243 P.kodakaraensis:243

B3LBK2              	100.00%		Q9HHC4              	100.00%
Bootstrap support for B3LBK2 as seed ortholog is 100%.
Bootstrap support for Q9HHC4 as seed ortholog is 100%.

Group of orthologs #44. Best score 242 bits
Score difference with first non-orthologous sequence - P.knowlesi:242 P.kodakaraensis:242

B3L4L9              	100.00%		Q5JFK3              	100.00%
Bootstrap support for B3L4L9 as seed ortholog is 100%.
Bootstrap support for Q5JFK3 as seed ortholog is 100%.

Group of orthologs #45. Best score 242 bits
Score difference with first non-orthologous sequence - P.knowlesi:242 P.kodakaraensis:97

B3L8I7              	100.00%		Q5JHX4              	100.00%
Bootstrap support for B3L8I7 as seed ortholog is 100%.
Bootstrap support for Q5JHX4 as seed ortholog is 99%.

Group of orthologs #46. Best score 240 bits
Score difference with first non-orthologous sequence - P.knowlesi:20 P.kodakaraensis:240

B3L971              	100.00%		Q5JFZ6              	100.00%
B3L1P5              	39.85%		
B3L3Z3              	6.95%		
Bootstrap support for B3L971 as seed ortholog is 71%.
Alternative seed ortholog is B3L0G9 (20 bits away from this cluster)
Bootstrap support for Q5JFZ6 as seed ortholog is 100%.

Group of orthologs #47. Best score 233 bits
Score difference with first non-orthologous sequence - P.knowlesi:233 P.kodakaraensis:233

B3L014              	100.00%		Q5JGN0              	100.00%
Bootstrap support for B3L014 as seed ortholog is 100%.
Bootstrap support for Q5JGN0 as seed ortholog is 100%.

Group of orthologs #48. Best score 232 bits
Score difference with first non-orthologous sequence - P.knowlesi:232 P.kodakaraensis:232

B3KZH9              	100.00%		Q76KA8              	100.00%
Bootstrap support for B3KZH9 as seed ortholog is 100%.
Bootstrap support for Q76KA8 as seed ortholog is 100%.

Group of orthologs #49. Best score 227 bits
Score difference with first non-orthologous sequence - P.knowlesi:227 P.kodakaraensis:227

B3L1W5              	100.00%		Q5JHC6              	100.00%
Bootstrap support for B3L1W5 as seed ortholog is 100%.
Bootstrap support for Q5JHC6 as seed ortholog is 100%.

Group of orthologs #50. Best score 222 bits
Score difference with first non-orthologous sequence - P.knowlesi:222 P.kodakaraensis:222

B3L240              	100.00%		Q5JDJ0              	100.00%
Bootstrap support for B3L240 as seed ortholog is 100%.
Bootstrap support for Q5JDJ0 as seed ortholog is 100%.

Group of orthologs #51. Best score 220 bits
Score difference with first non-orthologous sequence - P.knowlesi:220 P.kodakaraensis:220

B3KZ67              	100.00%		Q5JF63              	100.00%
Bootstrap support for B3KZ67 as seed ortholog is 100%.
Bootstrap support for Q5JF63 as seed ortholog is 100%.

Group of orthologs #52. Best score 217 bits
Score difference with first non-orthologous sequence - P.knowlesi:126 P.kodakaraensis:217

B3L268              	100.00%		Q5JEW3              	100.00%
Bootstrap support for B3L268 as seed ortholog is 100%.
Bootstrap support for Q5JEW3 as seed ortholog is 100%.

Group of orthologs #53. Best score 217 bits
Score difference with first non-orthologous sequence - P.knowlesi:217 P.kodakaraensis:111

B3L8F0              	100.00%		Q5JHM9              	100.00%
Bootstrap support for B3L8F0 as seed ortholog is 100%.
Bootstrap support for Q5JHM9 as seed ortholog is 99%.

Group of orthologs #54. Best score 215 bits
Score difference with first non-orthologous sequence - P.knowlesi:215 P.kodakaraensis:215

B3LAT9              	100.00%		Q5JFN1              	100.00%
Bootstrap support for B3LAT9 as seed ortholog is 100%.
Bootstrap support for Q5JFN1 as seed ortholog is 100%.

Group of orthologs #55. Best score 215 bits
Score difference with first non-orthologous sequence - P.knowlesi:50 P.kodakaraensis:215

B3LDA2              	100.00%		Q5JHP3              	100.00%
Bootstrap support for B3LDA2 as seed ortholog is 90%.
Bootstrap support for Q5JHP3 as seed ortholog is 100%.

Group of orthologs #56. Best score 214 bits
Score difference with first non-orthologous sequence - P.knowlesi:142 P.kodakaraensis:214

B3L733              	100.00%		Q5JGQ7              	100.00%
B3L619              	37.72%		
Bootstrap support for B3L733 as seed ortholog is 99%.
Bootstrap support for Q5JGQ7 as seed ortholog is 100%.

Group of orthologs #57. Best score 214 bits
Score difference with first non-orthologous sequence - P.knowlesi:95 P.kodakaraensis:214

B3L699              	100.00%		Q5JDH2              	100.00%
Bootstrap support for B3L699 as seed ortholog is 99%.
Bootstrap support for Q5JDH2 as seed ortholog is 100%.

Group of orthologs #58. Best score 207 bits
Score difference with first non-orthologous sequence - P.knowlesi:207 P.kodakaraensis:207

B3L2P2              	100.00%		Q5JIG7              	100.00%
Bootstrap support for B3L2P2 as seed ortholog is 100%.
Bootstrap support for Q5JIG7 as seed ortholog is 100%.

Group of orthologs #59. Best score 205 bits
Score difference with first non-orthologous sequence - P.knowlesi:205 P.kodakaraensis:9

B3L7W8              	100.00%		Q5JFW3              	100.00%
Bootstrap support for B3L7W8 as seed ortholog is 100%.
Bootstrap support for Q5JFW3 as seed ortholog is 56%.
Alternative seed ortholog is Q5JEW1 (9 bits away from this cluster)

Group of orthologs #60. Best score 185 bits
Score difference with first non-orthologous sequence - P.knowlesi:185 P.kodakaraensis:185

B3LAN0              	100.00%		Q5JG66              	100.00%
Bootstrap support for B3LAN0 as seed ortholog is 100%.
Bootstrap support for Q5JG66 as seed ortholog is 100%.

Group of orthologs #61. Best score 184 bits
Score difference with first non-orthologous sequence - P.knowlesi:184 P.kodakaraensis:55

B3LAG9              	100.00%		Q5JI97              	100.00%
Bootstrap support for B3LAG9 as seed ortholog is 100%.
Bootstrap support for Q5JI97 as seed ortholog is 85%.

Group of orthologs #62. Best score 183 bits
Score difference with first non-orthologous sequence - P.knowlesi:183 P.kodakaraensis:183

B3L1H7              	100.00%		Q5JH43              	100.00%
Bootstrap support for B3L1H7 as seed ortholog is 100%.
Bootstrap support for Q5JH43 as seed ortholog is 100%.

Group of orthologs #63. Best score 183 bits
Score difference with first non-orthologous sequence - P.knowlesi:183 P.kodakaraensis:183

B3L056              	100.00%		Q5JIJ0              	100.00%
Bootstrap support for B3L056 as seed ortholog is 100%.
Bootstrap support for Q5JIJ0 as seed ortholog is 100%.

Group of orthologs #64. Best score 181 bits
Score difference with first non-orthologous sequence - P.knowlesi:181 P.kodakaraensis:181

B3LA84              	100.00%		O59650              	100.00%
B3LAJ5              	48.30%		
Bootstrap support for B3LA84 as seed ortholog is 100%.
Bootstrap support for O59650 as seed ortholog is 100%.

Group of orthologs #65. Best score 181 bits
Score difference with first non-orthologous sequence - P.knowlesi:181 P.kodakaraensis:181

B3L2P3              	100.00%		O08467              	100.00%
Bootstrap support for B3L2P3 as seed ortholog is 100%.
Bootstrap support for O08467 as seed ortholog is 100%.

Group of orthologs #66. Best score 181 bits
Score difference with first non-orthologous sequence - P.knowlesi:3 P.kodakaraensis:181

B3L787              	100.00%		Q5JIU9              	100.00%
Bootstrap support for B3L787 as seed ortholog is 46%.
Alternative seed ortholog is B3L786 (3 bits away from this cluster)
Bootstrap support for Q5JIU9 as seed ortholog is 100%.

Group of orthologs #67. Best score 179 bits
Score difference with first non-orthologous sequence - P.knowlesi:179 P.kodakaraensis:179

B3L7S7              	100.00%		Q5JDV8              	100.00%
                    	       		Q5JIM8              	7.88%
Bootstrap support for B3L7S7 as seed ortholog is 100%.
Bootstrap support for Q5JDV8 as seed ortholog is 100%.

Group of orthologs #68. Best score 179 bits
Score difference with first non-orthologous sequence - P.knowlesi:90 P.kodakaraensis:179

B3LBE8              	100.00%		Q5JGD1              	100.00%
Bootstrap support for B3LBE8 as seed ortholog is 99%.
Bootstrap support for Q5JGD1 as seed ortholog is 100%.

Group of orthologs #69. Best score 176 bits
Score difference with first non-orthologous sequence - P.knowlesi:176 P.kodakaraensis:176

B3L3M4              	100.00%		Q5JFN0              	100.00%
B3L4Y8              	9.96%		
Bootstrap support for B3L3M4 as seed ortholog is 100%.
Bootstrap support for Q5JFN0 as seed ortholog is 100%.

Group of orthologs #70. Best score 173 bits
Score difference with first non-orthologous sequence - P.knowlesi:173 P.kodakaraensis:173

B3L6A6              	100.00%		Q5JJF3              	100.00%
Bootstrap support for B3L6A6 as seed ortholog is 100%.
Bootstrap support for Q5JJF3 as seed ortholog is 100%.

Group of orthologs #71. Best score 168 bits
Score difference with first non-orthologous sequence - P.knowlesi:168 P.kodakaraensis:168

B3L3M9              	100.00%		Q5JFE7              	100.00%
Bootstrap support for B3L3M9 as seed ortholog is 100%.
Bootstrap support for Q5JFE7 as seed ortholog is 100%.

Group of orthologs #72. Best score 168 bits
Score difference with first non-orthologous sequence - P.knowlesi:168 P.kodakaraensis:168

B3L6J8              	100.00%		Q5JDI0              	100.00%
Bootstrap support for B3L6J8 as seed ortholog is 100%.
Bootstrap support for Q5JDI0 as seed ortholog is 100%.

Group of orthologs #73. Best score 167 bits
Score difference with first non-orthologous sequence - P.knowlesi:167 P.kodakaraensis:167

B3LD11              	100.00%		Q5JF06              	100.00%
Bootstrap support for B3LD11 as seed ortholog is 100%.
Bootstrap support for Q5JF06 as seed ortholog is 100%.

Group of orthologs #74. Best score 166 bits
Score difference with first non-orthologous sequence - P.knowlesi:166 P.kodakaraensis:166

B3L4C7              	100.00%		Q5JE20              	100.00%
Bootstrap support for B3L4C7 as seed ortholog is 100%.
Bootstrap support for Q5JE20 as seed ortholog is 100%.

Group of orthologs #75. Best score 166 bits
Score difference with first non-orthologous sequence - P.knowlesi:166 P.kodakaraensis:166

B3L598              	100.00%		Q5JFG9              	100.00%
Bootstrap support for B3L598 as seed ortholog is 100%.
Bootstrap support for Q5JFG9 as seed ortholog is 100%.

Group of orthologs #76. Best score 165 bits
Score difference with first non-orthologous sequence - P.knowlesi:165 P.kodakaraensis:165

B3L230              	100.00%		Q5JJD2              	100.00%
Bootstrap support for B3L230 as seed ortholog is 100%.
Bootstrap support for Q5JJD2 as seed ortholog is 100%.

Group of orthologs #77. Best score 163 bits
Score difference with first non-orthologous sequence - P.knowlesi:163 P.kodakaraensis:163

B3L430              	100.00%		Q5JGS4              	100.00%
                    	       		Q5JCX7              	7.32%
Bootstrap support for B3L430 as seed ortholog is 100%.
Bootstrap support for Q5JGS4 as seed ortholog is 100%.

Group of orthologs #78. Best score 162 bits
Score difference with first non-orthologous sequence - P.knowlesi:162 P.kodakaraensis:162

B3L8U3              	100.00%		Q5JG47              	100.00%
Bootstrap support for B3L8U3 as seed ortholog is 100%.
Bootstrap support for Q5JG47 as seed ortholog is 100%.

Group of orthologs #79. Best score 158 bits
Score difference with first non-orthologous sequence - P.knowlesi:158 P.kodakaraensis:158

B3L086              	100.00%		Q5JJG1              	100.00%
Bootstrap support for B3L086 as seed ortholog is 100%.
Bootstrap support for Q5JJG1 as seed ortholog is 100%.

Group of orthologs #80. Best score 155 bits
Score difference with first non-orthologous sequence - P.knowlesi:155 P.kodakaraensis:155

B3L9U8              	100.00%		Q5JJG8              	100.00%
Bootstrap support for B3L9U8 as seed ortholog is 100%.
Bootstrap support for Q5JJG8 as seed ortholog is 100%.

Group of orthologs #81. Best score 153 bits
Score difference with first non-orthologous sequence - P.knowlesi:153 P.kodakaraensis:153

B3L781              	100.00%		Q5JIE6              	100.00%
Bootstrap support for B3L781 as seed ortholog is 100%.
Bootstrap support for Q5JIE6 as seed ortholog is 100%.

Group of orthologs #82. Best score 151 bits
Score difference with first non-orthologous sequence - P.knowlesi:30 P.kodakaraensis:151

B3L9J0              	100.00%		Q5JE76              	100.00%
Bootstrap support for B3L9J0 as seed ortholog is 77%.
Bootstrap support for Q5JE76 as seed ortholog is 100%.

Group of orthologs #83. Best score 151 bits
Score difference with first non-orthologous sequence - P.knowlesi:151 P.kodakaraensis:151

B3LAT1              	100.00%		Q5JH96              	100.00%
Bootstrap support for B3LAT1 as seed ortholog is 100%.
Bootstrap support for Q5JH96 as seed ortholog is 100%.

Group of orthologs #84. Best score 150 bits
Score difference with first non-orthologous sequence - P.knowlesi:150 P.kodakaraensis:150

B3L6U2              	100.00%		Q5JIL7              	100.00%
Bootstrap support for B3L6U2 as seed ortholog is 100%.
Bootstrap support for Q5JIL7 as seed ortholog is 100%.

Group of orthologs #85. Best score 149 bits
Score difference with first non-orthologous sequence - P.knowlesi:44 P.kodakaraensis:149

B3L3M8              	100.00%		Q5JH68              	100.00%
Bootstrap support for B3L3M8 as seed ortholog is 95%.
Bootstrap support for Q5JH68 as seed ortholog is 100%.

Group of orthologs #86. Best score 147 bits
Score difference with first non-orthologous sequence - P.knowlesi:147 P.kodakaraensis:147

B3L3C0              	100.00%		Q5JDD8              	100.00%
Bootstrap support for B3L3C0 as seed ortholog is 100%.
Bootstrap support for Q5JDD8 as seed ortholog is 100%.

Group of orthologs #87. Best score 146 bits
Score difference with first non-orthologous sequence - P.knowlesi:146 P.kodakaraensis:146

B3L6C0              	100.00%		Q5JH26              	100.00%
Bootstrap support for B3L6C0 as seed ortholog is 100%.
Bootstrap support for Q5JH26 as seed ortholog is 100%.

Group of orthologs #88. Best score 145 bits
Score difference with first non-orthologous sequence - P.knowlesi:145 P.kodakaraensis:145

B3L422              	100.00%		Q5JH24              	100.00%
Bootstrap support for B3L422 as seed ortholog is 100%.
Bootstrap support for Q5JH24 as seed ortholog is 100%.

Group of orthologs #89. Best score 145 bits
Score difference with first non-orthologous sequence - P.knowlesi:145 P.kodakaraensis:145

B3L5A9              	100.00%		Q5JH36              	100.00%
Bootstrap support for B3L5A9 as seed ortholog is 100%.
Bootstrap support for Q5JH36 as seed ortholog is 100%.

Group of orthologs #90. Best score 144 bits
Score difference with first non-orthologous sequence - P.knowlesi:144 P.kodakaraensis:33

B3LCU7              	100.00%		Q5JDP5              	100.00%
                    	       		Q5JDB4              	8.09%
                    	       		Q5JI15              	5.70%
Bootstrap support for B3LCU7 as seed ortholog is 100%.
Bootstrap support for Q5JDP5 as seed ortholog is 85%.

Group of orthologs #91. Best score 144 bits
Score difference with first non-orthologous sequence - P.knowlesi:144 P.kodakaraensis:144

B3L2B7              	100.00%		Q5JDZ7              	100.00%
B3L3I0              	7.28%		
Bootstrap support for B3L2B7 as seed ortholog is 100%.
Bootstrap support for Q5JDZ7 as seed ortholog is 100%.

Group of orthologs #92. Best score 144 bits
Score difference with first non-orthologous sequence - P.knowlesi:144 P.kodakaraensis:144

B3L0A6              	100.00%		Q5JE04              	100.00%
Bootstrap support for B3L0A6 as seed ortholog is 100%.
Bootstrap support for Q5JE04 as seed ortholog is 100%.

Group of orthologs #93. Best score 144 bits
Score difference with first non-orthologous sequence - P.knowlesi:144 P.kodakaraensis:144

B3L9A1              	100.00%		Q5JDH5              	100.00%
Bootstrap support for B3L9A1 as seed ortholog is 100%.
Bootstrap support for Q5JDH5 as seed ortholog is 100%.

Group of orthologs #94. Best score 144 bits
Score difference with first non-orthologous sequence - P.knowlesi:144 P.kodakaraensis:144

B3L4K6              	100.00%		Q5JJG0              	100.00%
Bootstrap support for B3L4K6 as seed ortholog is 100%.
Bootstrap support for Q5JJG0 as seed ortholog is 100%.

Group of orthologs #95. Best score 144 bits
Score difference with first non-orthologous sequence - P.knowlesi:144 P.kodakaraensis:144

B3LAK2              	100.00%		Q5JI54              	100.00%
Bootstrap support for B3LAK2 as seed ortholog is 100%.
Bootstrap support for Q5JI54 as seed ortholog is 100%.

Group of orthologs #96. Best score 143 bits
Score difference with first non-orthologous sequence - P.knowlesi:143 P.kodakaraensis:143

B3LBM4              	100.00%		Q5JHF7              	100.00%
                    	       		Q5JE68              	34.24%
Bootstrap support for B3LBM4 as seed ortholog is 100%.
Bootstrap support for Q5JHF7 as seed ortholog is 100%.

Group of orthologs #97. Best score 143 bits
Score difference with first non-orthologous sequence - P.knowlesi:143 P.kodakaraensis:143

B3L2B2              	100.00%		Q5JFX8              	100.00%
Bootstrap support for B3L2B2 as seed ortholog is 100%.
Bootstrap support for Q5JFX8 as seed ortholog is 100%.

Group of orthologs #98. Best score 141 bits
Score difference with first non-orthologous sequence - P.knowlesi:141 P.kodakaraensis:141

B3L734              	100.00%		Q5JGJ4              	100.00%
Bootstrap support for B3L734 as seed ortholog is 100%.
Bootstrap support for Q5JGJ4 as seed ortholog is 100%.

Group of orthologs #99. Best score 141 bits
Score difference with first non-orthologous sequence - P.knowlesi:141 P.kodakaraensis:141

B3LBZ3              	100.00%		Q5JDH3              	100.00%
Bootstrap support for B3LBZ3 as seed ortholog is 100%.
Bootstrap support for Q5JDH3 as seed ortholog is 100%.

Group of orthologs #100. Best score 141 bits
Score difference with first non-orthologous sequence - P.knowlesi:141 P.kodakaraensis:141

B3LC53              	100.00%		Q5JIH2              	100.00%
Bootstrap support for B3LC53 as seed ortholog is 100%.
Bootstrap support for Q5JIH2 as seed ortholog is 100%.

Group of orthologs #101. Best score 138 bits
Score difference with first non-orthologous sequence - P.knowlesi:138 P.kodakaraensis:138

B3L7Q9              	100.00%		Q5JJG6              	100.00%
Bootstrap support for B3L7Q9 as seed ortholog is 100%.
Bootstrap support for Q5JJG6 as seed ortholog is 100%.

Group of orthologs #102. Best score 136 bits
Score difference with first non-orthologous sequence - P.knowlesi:136 P.kodakaraensis:136

B3KZL1              	100.00%		Q5JDF4              	100.00%
B3LBA7              	13.95%		
Bootstrap support for B3KZL1 as seed ortholog is 100%.
Bootstrap support for Q5JDF4 as seed ortholog is 100%.

Group of orthologs #103. Best score 136 bits
Score difference with first non-orthologous sequence - P.knowlesi:136 P.kodakaraensis:136

B3LC08              	100.00%		Q5JIB3              	100.00%
Bootstrap support for B3LC08 as seed ortholog is 100%.
Bootstrap support for Q5JIB3 as seed ortholog is 100%.

Group of orthologs #104. Best score 135 bits
Score difference with first non-orthologous sequence - P.knowlesi:135 P.kodakaraensis:135

B3L4A4              	100.00%		Q5JIA2              	100.00%
Bootstrap support for B3L4A4 as seed ortholog is 100%.
Bootstrap support for Q5JIA2 as seed ortholog is 100%.

Group of orthologs #105. Best score 135 bits
Score difference with first non-orthologous sequence - P.knowlesi:135 P.kodakaraensis:135

B3L6V5              	100.00%		Q5JGR7              	100.00%
Bootstrap support for B3L6V5 as seed ortholog is 100%.
Bootstrap support for Q5JGR7 as seed ortholog is 100%.

Group of orthologs #106. Best score 132 bits
Score difference with first non-orthologous sequence - P.knowlesi:132 P.kodakaraensis:132

B3L8Y4              	100.00%		O52958              	100.00%
B3L8V5              	8.57%		
Bootstrap support for B3L8Y4 as seed ortholog is 100%.
Bootstrap support for O52958 as seed ortholog is 100%.

Group of orthologs #107. Best score 132 bits
Score difference with first non-orthologous sequence - P.knowlesi:132 P.kodakaraensis:132

B3L0B0              	100.00%		Q5JIB9              	100.00%
Bootstrap support for B3L0B0 as seed ortholog is 100%.
Bootstrap support for Q5JIB9 as seed ortholog is 100%.

Group of orthologs #108. Best score 132 bits
Score difference with first non-orthologous sequence - P.knowlesi:132 P.kodakaraensis:132

B3L567              	100.00%		Q5JJF1              	100.00%
Bootstrap support for B3L567 as seed ortholog is 100%.
Bootstrap support for Q5JJF1 as seed ortholog is 100%.

Group of orthologs #109. Best score 132 bits
Score difference with first non-orthologous sequence - P.knowlesi:132 P.kodakaraensis:132

B3LC44              	100.00%		Q5JJ45              	100.00%
Bootstrap support for B3LC44 as seed ortholog is 100%.
Bootstrap support for Q5JJ45 as seed ortholog is 100%.

Group of orthologs #110. Best score 128 bits
Score difference with first non-orthologous sequence - P.knowlesi:66 P.kodakaraensis:128

B3LDA7              	100.00%		Q5JJ78              	100.00%
Bootstrap support for B3LDA7 as seed ortholog is 99%.
Bootstrap support for Q5JJ78 as seed ortholog is 100%.

Group of orthologs #111. Best score 127 bits
Score difference with first non-orthologous sequence - P.knowlesi:127 P.kodakaraensis:127

B3L0T9              	100.00%		Q5JDV0              	100.00%
B3LAB1              	5.66%		
Bootstrap support for B3L0T9 as seed ortholog is 100%.
Bootstrap support for Q5JDV0 as seed ortholog is 100%.

Group of orthologs #112. Best score 127 bits
Score difference with first non-orthologous sequence - P.knowlesi:81 P.kodakaraensis:127

B3L8R4              	100.00%		Q5JJF8              	100.00%
Bootstrap support for B3L8R4 as seed ortholog is 99%.
Bootstrap support for Q5JJF8 as seed ortholog is 100%.

Group of orthologs #113. Best score 121 bits
Score difference with first non-orthologous sequence - P.knowlesi:121 P.kodakaraensis:121

B3LAL7              	100.00%		Q5JDI6              	100.00%
Bootstrap support for B3LAL7 as seed ortholog is 100%.
Bootstrap support for Q5JDI6 as seed ortholog is 100%.

Group of orthologs #114. Best score 118 bits
Score difference with first non-orthologous sequence - P.knowlesi:118 P.kodakaraensis:118

B3L125              	100.00%		Q5JGE1              	100.00%
Bootstrap support for B3L125 as seed ortholog is 100%.
Bootstrap support for Q5JGE1 as seed ortholog is 100%.

Group of orthologs #115. Best score 118 bits
Score difference with first non-orthologous sequence - P.knowlesi:54 P.kodakaraensis:3

B3L2P6              	100.00%		Q5JHE3              	100.00%
Bootstrap support for B3L2P6 as seed ortholog is 95%.
Bootstrap support for Q5JHE3 as seed ortholog is 49%.
Alternative seed ortholog is Q5JIX4 (3 bits away from this cluster)

Group of orthologs #116. Best score 117 bits
Score difference with first non-orthologous sequence - P.knowlesi:13 P.kodakaraensis:117

B3L3Q4              	100.00%		Q5JDJ9              	100.00%
                    	       		Q5JHL8              	19.20%
Bootstrap support for B3L3Q4 as seed ortholog is 73%.
Alternative seed ortholog is B3L8V3 (13 bits away from this cluster)
Bootstrap support for Q5JDJ9 as seed ortholog is 100%.

Group of orthologs #117. Best score 117 bits
Score difference with first non-orthologous sequence - P.knowlesi:117 P.kodakaraensis:117

B3L6D2              	100.00%		Q5JJC1              	100.00%
Bootstrap support for B3L6D2 as seed ortholog is 100%.
Bootstrap support for Q5JJC1 as seed ortholog is 100%.

Group of orthologs #118. Best score 117 bits
Score difference with first non-orthologous sequence - P.knowlesi:49 P.kodakaraensis:117

B3LAB5              	100.00%		Q5JIR6              	100.00%
Bootstrap support for B3LAB5 as seed ortholog is 96%.
Bootstrap support for Q5JIR6 as seed ortholog is 100%.

Group of orthologs #119. Best score 116 bits
Score difference with first non-orthologous sequence - P.knowlesi:36 P.kodakaraensis:54

B3KZC5              	100.00%		Q5JF30              	100.00%
Bootstrap support for B3KZC5 as seed ortholog is 90%.
Bootstrap support for Q5JF30 as seed ortholog is 97%.

Group of orthologs #120. Best score 116 bits
Score difference with first non-orthologous sequence - P.knowlesi:116 P.kodakaraensis:116

B3L8Q5              	100.00%		Q5JGT4              	100.00%
Bootstrap support for B3L8Q5 as seed ortholog is 100%.
Bootstrap support for Q5JGT4 as seed ortholog is 100%.

Group of orthologs #121. Best score 114 bits
Score difference with first non-orthologous sequence - P.knowlesi:114 P.kodakaraensis:114

B3LCI0              	100.00%		Q5JGH7              	100.00%
Bootstrap support for B3LCI0 as seed ortholog is 100%.
Bootstrap support for Q5JGH7 as seed ortholog is 100%.

Group of orthologs #122. Best score 113 bits
Score difference with first non-orthologous sequence - P.knowlesi:113 P.kodakaraensis:61

B3L287              	100.00%		Q5JI45              	100.00%
                    	       		Q5JGT2              	39.20%
Bootstrap support for B3L287 as seed ortholog is 100%.
Bootstrap support for Q5JI45 as seed ortholog is 92%.

Group of orthologs #123. Best score 113 bits
Score difference with first non-orthologous sequence - P.knowlesi:113 P.kodakaraensis:22

B3L5M0              	100.00%		Q5JES4              	100.00%
Bootstrap support for B3L5M0 as seed ortholog is 100%.
Bootstrap support for Q5JES4 as seed ortholog is 77%.

Group of orthologs #124. Best score 113 bits
Score difference with first non-orthologous sequence - P.knowlesi:113 P.kodakaraensis:113

B3L445              	100.00%		Q5JHV7              	100.00%
Bootstrap support for B3L445 as seed ortholog is 100%.
Bootstrap support for Q5JHV7 as seed ortholog is 100%.

Group of orthologs #125. Best score 112 bits
Score difference with first non-orthologous sequence - P.knowlesi:112 P.kodakaraensis:112

B3KZ79              	100.00%		Q5JDS2              	100.00%
Bootstrap support for B3KZ79 as seed ortholog is 100%.
Bootstrap support for Q5JDS2 as seed ortholog is 100%.

Group of orthologs #126. Best score 111 bits
Score difference with first non-orthologous sequence - P.knowlesi:111 P.kodakaraensis:111

B3LB86              	100.00%		Q5JEZ9              	100.00%
Bootstrap support for B3LB86 as seed ortholog is 100%.
Bootstrap support for Q5JEZ9 as seed ortholog is 100%.

Group of orthologs #127. Best score 111 bits
Score difference with first non-orthologous sequence - P.knowlesi:111 P.kodakaraensis:111

B3LC68              	100.00%		Q5JJE2              	100.00%
Bootstrap support for B3LC68 as seed ortholog is 100%.
Bootstrap support for Q5JJE2 as seed ortholog is 100%.

Group of orthologs #128. Best score 110 bits
Score difference with first non-orthologous sequence - P.knowlesi:110 P.kodakaraensis:110

B3L0T5              	100.00%		Q5JF38              	100.00%
Bootstrap support for B3L0T5 as seed ortholog is 100%.
Bootstrap support for Q5JF38 as seed ortholog is 100%.

Group of orthologs #129. Best score 110 bits
Score difference with first non-orthologous sequence - P.knowlesi:110 P.kodakaraensis:110

B3L443              	100.00%		Q5JJG3              	100.00%
Bootstrap support for B3L443 as seed ortholog is 100%.
Bootstrap support for Q5JJG3 as seed ortholog is 100%.

Group of orthologs #130. Best score 109 bits
Score difference with first non-orthologous sequence - P.knowlesi:109 P.kodakaraensis:109

B3L1G8              	100.00%		Q5JIF4              	100.00%
Bootstrap support for B3L1G8 as seed ortholog is 100%.
Bootstrap support for Q5JIF4 as seed ortholog is 100%.

Group of orthologs #131. Best score 109 bits
Score difference with first non-orthologous sequence - P.knowlesi:109 P.kodakaraensis:109

B3L7H0              	100.00%		O74035              	100.00%
Bootstrap support for B3L7H0 as seed ortholog is 100%.
Bootstrap support for O74035 as seed ortholog is 100%.

Group of orthologs #132. Best score 109 bits
Score difference with first non-orthologous sequence - P.knowlesi:109 P.kodakaraensis:109

B3L565              	100.00%		Q5JGC8              	100.00%
Bootstrap support for B3L565 as seed ortholog is 100%.
Bootstrap support for Q5JGC8 as seed ortholog is 100%.

Group of orthologs #133. Best score 109 bits
Score difference with first non-orthologous sequence - P.knowlesi:47 P.kodakaraensis:109

B3L665              	100.00%		Q5JJF2              	100.00%
Bootstrap support for B3L665 as seed ortholog is 97%.
Bootstrap support for Q5JJF2 as seed ortholog is 100%.

Group of orthologs #134. Best score 109 bits
Score difference with first non-orthologous sequence - P.knowlesi:109 P.kodakaraensis:109

B3LA05              	100.00%		Q5JH35              	100.00%
Bootstrap support for B3LA05 as seed ortholog is 100%.
Bootstrap support for Q5JH35 as seed ortholog is 100%.

Group of orthologs #135. Best score 107 bits
Score difference with first non-orthologous sequence - P.knowlesi:107 P.kodakaraensis:107

B3L470              	100.00%		Q5JJF9              	100.00%
Bootstrap support for B3L470 as seed ortholog is 100%.
Bootstrap support for Q5JJF9 as seed ortholog is 100%.

Group of orthologs #136. Best score 107 bits
Score difference with first non-orthologous sequence - P.knowlesi:107 P.kodakaraensis:107

B3L752              	100.00%		Q5JH16              	100.00%
Bootstrap support for B3L752 as seed ortholog is 100%.
Bootstrap support for Q5JH16 as seed ortholog is 100%.

Group of orthologs #137. Best score 106 bits
Score difference with first non-orthologous sequence - P.knowlesi:106 P.kodakaraensis:106

B3L3Z6              	100.00%		Q5JIT6              	100.00%
Bootstrap support for B3L3Z6 as seed ortholog is 100%.
Bootstrap support for Q5JIT6 as seed ortholog is 100%.

Group of orthologs #138. Best score 105 bits
Score difference with first non-orthologous sequence - P.knowlesi:105 P.kodakaraensis:105

B3LAE0              	100.00%		Q5JJG7              	100.00%
Bootstrap support for B3LAE0 as seed ortholog is 100%.
Bootstrap support for Q5JJG7 as seed ortholog is 100%.

Group of orthologs #139. Best score 103 bits
Score difference with first non-orthologous sequence - P.knowlesi:103 P.kodakaraensis:103

B3L6K8              	100.00%		Q52366              	100.00%
Bootstrap support for B3L6K8 as seed ortholog is 100%.
Bootstrap support for Q52366 as seed ortholog is 100%.

Group of orthologs #140. Best score 103 bits
Score difference with first non-orthologous sequence - P.knowlesi:103 P.kodakaraensis:103

B3L8I0              	100.00%		Q5JIR1              	100.00%
Bootstrap support for B3L8I0 as seed ortholog is 100%.
Bootstrap support for Q5JIR1 as seed ortholog is 100%.

Group of orthologs #141. Best score 101 bits
Score difference with first non-orthologous sequence - P.knowlesi:101 P.kodakaraensis:101

B3L904              	100.00%		Q5JJG4              	100.00%
Bootstrap support for B3L904 as seed ortholog is 100%.
Bootstrap support for Q5JJG4 as seed ortholog is 100%.

Group of orthologs #142. Best score 100 bits
Score difference with first non-orthologous sequence - P.knowlesi:100 P.kodakaraensis:100

B3L1P2              	100.00%		Q5JGN5              	100.00%
Bootstrap support for B3L1P2 as seed ortholog is 100%.
Bootstrap support for Q5JGN5 as seed ortholog is 100%.

Group of orthologs #143. Best score 99 bits
Score difference with first non-orthologous sequence - P.knowlesi:99 P.kodakaraensis:99

B3L6W6              	100.00%		Q5JDG3              	100.00%
B3L8F9              	7.16%		
Bootstrap support for B3L6W6 as seed ortholog is 100%.
Bootstrap support for Q5JDG3 as seed ortholog is 100%.

Group of orthologs #144. Best score 99 bits
Score difference with first non-orthologous sequence - P.knowlesi:99 P.kodakaraensis:99

B3L4W5              	100.00%		Q5JFR2              	100.00%
Bootstrap support for B3L4W5 as seed ortholog is 100%.
Bootstrap support for Q5JFR2 as seed ortholog is 100%.

Group of orthologs #145. Best score 98 bits
Score difference with first non-orthologous sequence - P.knowlesi:98 P.kodakaraensis:98

B3KZ28              	100.00%		Q5JEZ6              	100.00%
Bootstrap support for B3KZ28 as seed ortholog is 100%.
Bootstrap support for Q5JEZ6 as seed ortholog is 100%.

Group of orthologs #146. Best score 98 bits
Score difference with first non-orthologous sequence - P.knowlesi:98 P.kodakaraensis:98

B3L3W7              	100.00%		Q5JGM4              	100.00%
Bootstrap support for B3L3W7 as seed ortholog is 100%.
Bootstrap support for Q5JGM4 as seed ortholog is 100%.

Group of orthologs #147. Best score 98 bits
Score difference with first non-orthologous sequence - P.knowlesi:98 P.kodakaraensis:98

B3L879              	100.00%		Q5JDH4              	100.00%
Bootstrap support for B3L879 as seed ortholog is 100%.
Bootstrap support for Q5JDH4 as seed ortholog is 100%.

Group of orthologs #148. Best score 98 bits
Score difference with first non-orthologous sequence - P.knowlesi:98 P.kodakaraensis:98

B3L8J6              	100.00%		Q5JH45              	100.00%
Bootstrap support for B3L8J6 as seed ortholog is 100%.
Bootstrap support for Q5JH45 as seed ortholog is 100%.

Group of orthologs #149. Best score 97 bits
Score difference with first non-orthologous sequence - P.knowlesi:97 P.kodakaraensis:97

B3L745              	100.00%		Q5JFW5              	100.00%
Bootstrap support for B3L745 as seed ortholog is 100%.
Bootstrap support for Q5JFW5 as seed ortholog is 100%.

Group of orthologs #150. Best score 97 bits
Score difference with first non-orthologous sequence - P.knowlesi:97 P.kodakaraensis:97

B3LAA1              	100.00%		Q5JCY8              	100.00%
Bootstrap support for B3LAA1 as seed ortholog is 100%.
Bootstrap support for Q5JCY8 as seed ortholog is 100%.

Group of orthologs #151. Best score 97 bits
Score difference with first non-orthologous sequence - P.knowlesi:97 P.kodakaraensis:97

B3L4W9              	100.00%		Q5JJ26              	100.00%
Bootstrap support for B3L4W9 as seed ortholog is 100%.
Bootstrap support for Q5JJ26 as seed ortholog is 100%.

Group of orthologs #152. Best score 97 bits
Score difference with first non-orthologous sequence - P.knowlesi:97 P.kodakaraensis:97

B3L8J4              	100.00%		Q5JIR7              	100.00%
Bootstrap support for B3L8J4 as seed ortholog is 100%.
Bootstrap support for Q5JIR7 as seed ortholog is 100%.

Group of orthologs #153. Best score 97 bits
Score difference with first non-orthologous sequence - P.knowlesi:97 P.kodakaraensis:97

B3LAY7              	100.00%		Q5JI50              	100.00%
Bootstrap support for B3LAY7 as seed ortholog is 100%.
Bootstrap support for Q5JI50 as seed ortholog is 100%.

Group of orthologs #154. Best score 96 bits
Score difference with first non-orthologous sequence - P.knowlesi:96 P.kodakaraensis:96

B3KZR6              	100.00%		Q5JE49              	100.00%
Bootstrap support for B3KZR6 as seed ortholog is 100%.
Bootstrap support for Q5JE49 as seed ortholog is 100%.

Group of orthologs #155. Best score 96 bits
Score difference with first non-orthologous sequence - P.knowlesi:96 P.kodakaraensis:96

B3L098              	100.00%		Q5JEX8              	100.00%
Bootstrap support for B3L098 as seed ortholog is 100%.
Bootstrap support for Q5JEX8 as seed ortholog is 100%.

Group of orthologs #156. Best score 95 bits
Score difference with first non-orthologous sequence - P.knowlesi:95 P.kodakaraensis:95

B3L3H1              	100.00%		Q5JJF6              	100.00%
Bootstrap support for B3L3H1 as seed ortholog is 100%.
Bootstrap support for Q5JJF6 as seed ortholog is 100%.

Group of orthologs #157. Best score 95 bits
Score difference with first non-orthologous sequence - P.knowlesi:95 P.kodakaraensis:95

B3LCL3              	100.00%		Q5JDA8              	100.00%
Bootstrap support for B3LCL3 as seed ortholog is 100%.
Bootstrap support for Q5JDA8 as seed ortholog is 100%.

Group of orthologs #158. Best score 94 bits
Score difference with first non-orthologous sequence - P.knowlesi:94 P.kodakaraensis:94

B3L001              	100.00%		Q5JDB8              	100.00%
Bootstrap support for B3L001 as seed ortholog is 100%.
Bootstrap support for Q5JDB8 as seed ortholog is 100%.

Group of orthologs #159. Best score 94 bits
Score difference with first non-orthologous sequence - P.knowlesi:22 P.kodakaraensis:94

B3L698              	100.00%		Q5JH34              	100.00%
Bootstrap support for B3L698 as seed ortholog is 79%.
Bootstrap support for Q5JH34 as seed ortholog is 100%.

Group of orthologs #160. Best score 91 bits
Score difference with first non-orthologous sequence - P.knowlesi:29 P.kodakaraensis:91

B3L094              	100.00%		Q5JGP4              	21.14%
B3LCW5              	100.00%		Q5JFZ8              	100.00%
B3L1E7              	100.00%		Q5JJB9              	100.00%
B3LAI0              	7.27%		Q5JHY2              	12.95%
B3L2Q5              	6.16%		Q5JIK4              	6.00%
Bootstrap support for B3L094 as seed ortholog is 85%.
Bootstrap support for B3LCW5 as seed ortholog is 80%.
Bootstrap support for B3L1E7 as seed ortholog is 100%.
Bootstrap support for Q5JFZ8 as seed ortholog is 100%.
Bootstrap support for Q5JJB9 as seed ortholog is 100%.

Group of orthologs #161. Best score 91 bits
Score difference with first non-orthologous sequence - P.knowlesi:91 P.kodakaraensis:91

B3L435              	100.00%		Q5JDH9              	100.00%
Bootstrap support for B3L435 as seed ortholog is 100%.
Bootstrap support for Q5JDH9 as seed ortholog is 100%.

Group of orthologs #162. Best score 91 bits
Score difference with first non-orthologous sequence - P.knowlesi:91 P.kodakaraensis:91

B3L1J9              	100.00%		Q5JJC3              	100.00%
Bootstrap support for B3L1J9 as seed ortholog is 100%.
Bootstrap support for Q5JJC3 as seed ortholog is 100%.

Group of orthologs #163. Best score 91 bits
Score difference with first non-orthologous sequence - P.knowlesi:4 P.kodakaraensis:91

B3L6A5              	100.00%		Q5JI92              	100.00%
Bootstrap support for B3L6A5 as seed ortholog is 49%.
Alternative seed ortholog is B3L399 (4 bits away from this cluster)
Bootstrap support for Q5JI92 as seed ortholog is 100%.

Group of orthologs #164. Best score 90 bits
Score difference with first non-orthologous sequence - P.knowlesi:90 P.kodakaraensis:90

B3LBV1              	100.00%		Q5JI98              	100.00%
Bootstrap support for B3LBV1 as seed ortholog is 100%.
Bootstrap support for Q5JI98 as seed ortholog is 100%.

Group of orthologs #165. Best score 89 bits
Score difference with first non-orthologous sequence - P.knowlesi:89 P.kodakaraensis:89

B3L702              	100.00%		Q5JF32              	100.00%
B3LCQ6              	11.38%		Q5JFD3              	46.04%
Bootstrap support for B3L702 as seed ortholog is 100%.
Bootstrap support for Q5JF32 as seed ortholog is 100%.

Group of orthologs #166. Best score 88 bits
Score difference with first non-orthologous sequence - P.knowlesi:32 P.kodakaraensis:88

B3L4U2              	100.00%		Q5JH94              	100.00%
B3L110              	10.47%		
Bootstrap support for B3L4U2 as seed ortholog is 93%.
Bootstrap support for Q5JH94 as seed ortholog is 100%.

Group of orthologs #167. Best score 88 bits
Score difference with first non-orthologous sequence - P.knowlesi:88 P.kodakaraensis:88

B3L594              	100.00%		Q5JIH4              	100.00%
Bootstrap support for B3L594 as seed ortholog is 100%.
Bootstrap support for Q5JIH4 as seed ortholog is 100%.

Group of orthologs #168. Best score 87 bits
Score difference with first non-orthologous sequence - P.knowlesi:87 P.kodakaraensis:87

B3L5N8              	100.00%		Q5JJF4              	100.00%
Bootstrap support for B3L5N8 as seed ortholog is 100%.
Bootstrap support for Q5JJF4 as seed ortholog is 100%.

Group of orthologs #169. Best score 86 bits
Score difference with first non-orthologous sequence - P.knowlesi:86 P.kodakaraensis:86

B3L3G6              	100.00%		Q5JFZ5              	100.00%
Bootstrap support for B3L3G6 as seed ortholog is 100%.
Bootstrap support for Q5JFZ5 as seed ortholog is 100%.

Group of orthologs #170. Best score 84 bits
Score difference with first non-orthologous sequence - P.knowlesi:84 P.kodakaraensis:84

B3KZ42              	100.00%		Q5JIE9              	100.00%
B3KZ43              	32.18%		
B3L336              	24.29%		
B3L0Y4              	21.56%		
B3L1R3              	18.40%		
B3L8U5              	7.36%		
Bootstrap support for B3KZ42 as seed ortholog is 100%.
Bootstrap support for Q5JIE9 as seed ortholog is 100%.

Group of orthologs #171. Best score 84 bits
Score difference with first non-orthologous sequence - P.knowlesi:84 P.kodakaraensis:84

B3LBX3              	100.00%		Q5JGS7              	100.00%
Bootstrap support for B3LBX3 as seed ortholog is 100%.
Bootstrap support for Q5JGS7 as seed ortholog is 100%.

Group of orthologs #172. Best score 83 bits
Score difference with first non-orthologous sequence - P.knowlesi:83 P.kodakaraensis:83

B3LAM7              	100.00%		Q5JET7              	100.00%
Bootstrap support for B3LAM7 as seed ortholog is 100%.
Bootstrap support for Q5JET7 as seed ortholog is 100%.

Group of orthologs #173. Best score 82 bits
Score difference with first non-orthologous sequence - P.knowlesi:82 P.kodakaraensis:82

B3LBG9              	100.00%		Q5JDI9              	100.00%
Bootstrap support for B3LBG9 as seed ortholog is 100%.
Bootstrap support for Q5JDI9 as seed ortholog is 100%.

Group of orthologs #174. Best score 81 bits
Score difference with first non-orthologous sequence - P.knowlesi:81 P.kodakaraensis:81

B3L1X5              	100.00%		Q877I0              	100.00%
Bootstrap support for B3L1X5 as seed ortholog is 100%.
Bootstrap support for Q877I0 as seed ortholog is 100%.

Group of orthologs #175. Best score 80 bits
Score difference with first non-orthologous sequence - P.knowlesi:80 P.kodakaraensis:80

B3L0Q3              	100.00%		Q5JDM6              	100.00%
Bootstrap support for B3L0Q3 as seed ortholog is 100%.
Bootstrap support for Q5JDM6 as seed ortholog is 100%.

Group of orthologs #176. Best score 80 bits
Score difference with first non-orthologous sequence - P.knowlesi:80 P.kodakaraensis:80

B3L5D7              	100.00%		Q5JFJ9              	100.00%
Bootstrap support for B3L5D7 as seed ortholog is 100%.
Bootstrap support for Q5JFJ9 as seed ortholog is 100%.

Group of orthologs #177. Best score 79 bits
Score difference with first non-orthologous sequence - P.knowlesi:79 P.kodakaraensis:79

B3LDF8              	100.00%		Q5JH21              	100.00%
Bootstrap support for B3LDF8 as seed ortholog is 100%.
Bootstrap support for Q5JH21 as seed ortholog is 100%.

Group of orthologs #178. Best score 78 bits
Score difference with first non-orthologous sequence - P.knowlesi:78 P.kodakaraensis:78

B3L0T6              	100.00%		Q5JF34              	100.00%
Bootstrap support for B3L0T6 as seed ortholog is 100%.
Bootstrap support for Q5JF34 as seed ortholog is 100%.

Group of orthologs #179. Best score 77 bits
Score difference with first non-orthologous sequence - P.knowlesi:77 P.kodakaraensis:77

B3L3U6              	100.00%		Q5JIB6              	100.00%
B3KZA6              	16.83%		Q5JH42              	25.41%
Bootstrap support for B3L3U6 as seed ortholog is 100%.
Bootstrap support for Q5JIB6 as seed ortholog is 100%.

Group of orthologs #180. Best score 77 bits
Score difference with first non-orthologous sequence - P.knowlesi:77 P.kodakaraensis:77

B3LD63              	100.00%		Q5JHC0              	100.00%
                    	       		Q5JHG7              	5.78%
Bootstrap support for B3LD63 as seed ortholog is 100%.
Bootstrap support for Q5JHC0 as seed ortholog is 100%.

Group of orthologs #181. Best score 77 bits
Score difference with first non-orthologous sequence - P.knowlesi:77 P.kodakaraensis:77

B3L3P6              	100.00%		Q5JIT0              	100.00%
Bootstrap support for B3L3P6 as seed ortholog is 100%.
Bootstrap support for Q5JIT0 as seed ortholog is 100%.

Group of orthologs #182. Best score 77 bits
Score difference with first non-orthologous sequence - P.knowlesi:77 P.kodakaraensis:77

B3L349              	100.00%		Q5JJG5              	100.00%
Bootstrap support for B3L349 as seed ortholog is 100%.
Bootstrap support for Q5JJG5 as seed ortholog is 100%.

Group of orthologs #183. Best score 76 bits
Score difference with first non-orthologous sequence - P.knowlesi:76 P.kodakaraensis:76

B3L543              	100.00%		Q5JGR3              	100.00%
Bootstrap support for B3L543 as seed ortholog is 100%.
Bootstrap support for Q5JGR3 as seed ortholog is 100%.

Group of orthologs #184. Best score 75 bits
Score difference with first non-orthologous sequence - P.knowlesi:75 P.kodakaraensis:75

B3L2S3              	100.00%		Q5JFI2              	100.00%
Bootstrap support for B3L2S3 as seed ortholog is 100%.
Bootstrap support for Q5JFI2 as seed ortholog is 100%.

Group of orthologs #185. Best score 75 bits
Score difference with first non-orthologous sequence - P.knowlesi:75 P.kodakaraensis:75

B3KZ26              	100.00%		Q5JJC9              	100.00%
Bootstrap support for B3KZ26 as seed ortholog is 100%.
Bootstrap support for Q5JJC9 as seed ortholog is 100%.

Group of orthologs #186. Best score 75 bits
Score difference with first non-orthologous sequence - P.knowlesi:75 P.kodakaraensis:75

B3LBJ2              	100.00%		Q5JIX8              	100.00%
Bootstrap support for B3LBJ2 as seed ortholog is 100%.
Bootstrap support for Q5JIX8 as seed ortholog is 100%.

Group of orthologs #187. Best score 74 bits
Score difference with first non-orthologous sequence - P.knowlesi:19 P.kodakaraensis:74

B3LC69              	100.00%		Q5JJ05              	100.00%
                    	       		Q5JIE4              	12.34%
Bootstrap support for B3LC69 as seed ortholog is 71%.
Alternative seed ortholog is B3L3T0 (19 bits away from this cluster)
Bootstrap support for Q5JJ05 as seed ortholog is 100%.

Group of orthologs #188. Best score 73 bits
Score difference with first non-orthologous sequence - P.knowlesi:73 P.kodakaraensis:73

B3L660              	100.00%		Q5JD52              	100.00%
Bootstrap support for B3L660 as seed ortholog is 100%.
Bootstrap support for Q5JD52 as seed ortholog is 100%.

Group of orthologs #189. Best score 73 bits
Score difference with first non-orthologous sequence - P.knowlesi:73 P.kodakaraensis:73

B3L7B6              	100.00%		Q5JIX5              	100.00%
Bootstrap support for B3L7B6 as seed ortholog is 100%.
Bootstrap support for Q5JIX5 as seed ortholog is 100%.

Group of orthologs #190. Best score 71 bits
Score difference with first non-orthologous sequence - P.knowlesi:71 P.kodakaraensis:71

B3L090              	100.00%		Q5JE86              	100.00%
Bootstrap support for B3L090 as seed ortholog is 100%.
Bootstrap support for Q5JE86 as seed ortholog is 100%.

Group of orthologs #191. Best score 69 bits
Score difference with first non-orthologous sequence - P.knowlesi:69 P.kodakaraensis:69

B3L032              	100.00%		Q5JIR5              	100.00%
Bootstrap support for B3L032 as seed ortholog is 100%.
Bootstrap support for Q5JIR5 as seed ortholog is 100%.

Group of orthologs #192. Best score 69 bits
Score difference with first non-orthologous sequence - P.knowlesi:69 P.kodakaraensis:69

B3L3Y9              	100.00%		Q5JHS3              	100.00%
Bootstrap support for B3L3Y9 as seed ortholog is 100%.
Bootstrap support for Q5JHS3 as seed ortholog is 100%.

Group of orthologs #193. Best score 67 bits
Score difference with first non-orthologous sequence - P.knowlesi:67 P.kodakaraensis:67

B3L6M4              	100.00%		Q5JFW9              	100.00%
B3L9V4              	15.04%		
Bootstrap support for B3L6M4 as seed ortholog is 100%.
Bootstrap support for Q5JFW9 as seed ortholog is 100%.

Group of orthologs #194. Best score 67 bits
Score difference with first non-orthologous sequence - P.knowlesi:67 P.kodakaraensis:67

B3L3A5              	100.00%		Q5JGN3              	100.00%
Bootstrap support for B3L3A5 as seed ortholog is 100%.
Bootstrap support for Q5JGN3 as seed ortholog is 100%.

Group of orthologs #195. Best score 66 bits
Score difference with first non-orthologous sequence - P.knowlesi:66 P.kodakaraensis:66

B3L830              	100.00%		Q5JHR7              	100.00%
Bootstrap support for B3L830 as seed ortholog is 100%.
Bootstrap support for Q5JHR7 as seed ortholog is 100%.

Group of orthologs #196. Best score 66 bits
Score difference with first non-orthologous sequence - P.knowlesi:66 P.kodakaraensis:66

B3LB29              	100.00%		Q5JI42              	100.00%
Bootstrap support for B3LB29 as seed ortholog is 100%.
Bootstrap support for Q5JI42 as seed ortholog is 100%.

Group of orthologs #197. Best score 64 bits
Score difference with first non-orthologous sequence - P.knowlesi:64 P.kodakaraensis:64

B3L8R9              	100.00%		Q5JDG1              	100.00%
Bootstrap support for B3L8R9 as seed ortholog is 100%.
Bootstrap support for Q5JDG1 as seed ortholog is 100%.

Group of orthologs #198. Best score 64 bits
Score difference with first non-orthologous sequence - P.knowlesi:64 P.kodakaraensis:64

B3L9F1              	100.00%		Q5JGR4              	100.00%
Bootstrap support for B3L9F1 as seed ortholog is 100%.
Bootstrap support for Q5JGR4 as seed ortholog is 100%.

Group of orthologs #199. Best score 64 bits
Score difference with first non-orthologous sequence - P.knowlesi:64 P.kodakaraensis:64

B3LDD6              	100.00%		Q5JDG6              	100.00%
Bootstrap support for B3LDD6 as seed ortholog is 100%.
Bootstrap support for Q5JDG6 as seed ortholog is 100%.

Group of orthologs #200. Best score 63 bits
Score difference with first non-orthologous sequence - P.knowlesi:63 P.kodakaraensis:63

B3L176              	100.00%		Q5JI44              	100.00%
Bootstrap support for B3L176 as seed ortholog is 100%.
Bootstrap support for Q5JI44 as seed ortholog is 100%.

Group of orthologs #201. Best score 63 bits
Score difference with first non-orthologous sequence - P.knowlesi:63 P.kodakaraensis:63

B3LBP7              	100.00%		Q5JDW9              	100.00%
Bootstrap support for B3LBP7 as seed ortholog is 100%.
Bootstrap support for Q5JDW9 as seed ortholog is 100%.

Group of orthologs #202. Best score 63 bits
Score difference with first non-orthologous sequence - P.knowlesi:63 P.kodakaraensis:63

B3L8Q8              	100.00%		Q5JHH1              	100.00%
Bootstrap support for B3L8Q8 as seed ortholog is 100%.
Bootstrap support for Q5JHH1 as seed ortholog is 100%.

Group of orthologs #203. Best score 62 bits
Score difference with first non-orthologous sequence - P.knowlesi:62 P.kodakaraensis:62

B3LBF4              	100.00%		Q5JDQ2              	100.00%
                    	       		Q5JIB0              	100.00%
                    	       		Q5JCX0              	43.23%
                    	       		Q5JIN8              	40.07%
                    	       		Q5JDD3              	24.26%
                    	       		Q5JDA7              	19.67%
                    	       		Q5JG38              	19.29%
                    	       		Q5JIG1              	18.74%
                    	       		Q5JIG9              	15.74%
                    	       		Q5JGV1              	15.56%
                    	       		Q5JG70              	15.37%
                    	       		Q5JF59              	11.48%
                    	       		Q5JHJ6              	11.32%
                    	       		Q5JE43              	10.37%
                    	       		Q5JJ54              	9.81%
                    	       		Q5JEB0              	8.72%
                    	       		Q5JFJ1              	8.53%
                    	       		Q5JH77              	8.52%
                    	       		Q5JFI8              	7.42%
                    	       		Q5JFR9              	7.22%
                    	       		Q5JG06              	6.68%
                    	       		Q5JDT1              	5.75%
                    	       		Q5JHD4              	5.74%
                    	       		Q5JDP4              	5.57%
                    	       		Q5JDU2              	5.57%
                    	       		Q5JGD3              	5.19%
Bootstrap support for B3LBF4 as seed ortholog is 100%.
Bootstrap support for Q5JDQ2 as seed ortholog is 100%.
Bootstrap support for Q5JIB0 as seed ortholog is 100%.

Group of orthologs #204. Best score 62 bits
Score difference with first non-orthologous sequence - P.knowlesi:62 P.kodakaraensis:62

B3L3R5              	100.00%		Q68BJ6              	100.00%
                    	       		Q68BJ7              	34.92%
                    	       		Q6I7B6              	31.23%
Bootstrap support for B3L3R5 as seed ortholog is 100%.
Bootstrap support for Q68BJ6 as seed ortholog is 100%.

Group of orthologs #205. Best score 62 bits
Score difference with first non-orthologous sequence - P.knowlesi:62 P.kodakaraensis:62

B3L238              	100.00%		Q5JH82              	100.00%
Bootstrap support for B3L238 as seed ortholog is 100%.
Bootstrap support for Q5JH82 as seed ortholog is 100%.

Group of orthologs #206. Best score 62 bits
Score difference with first non-orthologous sequence - P.knowlesi:62 P.kodakaraensis:62

B3LBG7              	100.00%		Q5JEE1              	100.00%
Bootstrap support for B3LBG7 as seed ortholog is 100%.
Bootstrap support for Q5JEE1 as seed ortholog is 100%.

Group of orthologs #207. Best score 61 bits
Score difference with first non-orthologous sequence - P.knowlesi:61 P.kodakaraensis:61

B3KZH0              	100.00%		Q5JGN1              	100.00%
                    	       		P58109              	66.67%
Bootstrap support for B3KZH0 as seed ortholog is 100%.
Bootstrap support for Q5JGN1 as seed ortholog is 100%.

Group of orthologs #208. Best score 61 bits
Score difference with first non-orthologous sequence - P.knowlesi:4 P.kodakaraensis:61

B3KZI2              	100.00%		Q5JHP6              	100.00%
Bootstrap support for B3KZI2 as seed ortholog is 55%.
Alternative seed ortholog is B3L3G4 (4 bits away from this cluster)
Bootstrap support for Q5JHP6 as seed ortholog is 100%.

Group of orthologs #209. Best score 60 bits
Score difference with first non-orthologous sequence - P.knowlesi:60 P.kodakaraensis:60

B3L8I5              	100.00%		Q5JJF5              	100.00%
Bootstrap support for B3L8I5 as seed ortholog is 100%.
Bootstrap support for Q5JJF5 as seed ortholog is 100%.

Group of orthologs #210. Best score 59 bits
Score difference with first non-orthologous sequence - P.knowlesi:59 P.kodakaraensis:59

B3L2J5              	100.00%		Q5JIA1              	100.00%
B3L895              	11.53%		
Bootstrap support for B3L2J5 as seed ortholog is 100%.
Bootstrap support for Q5JIA1 as seed ortholog is 100%.

Group of orthologs #211. Best score 59 bits
Score difference with first non-orthologous sequence - P.knowlesi:59 P.kodakaraensis:59

B3LBC5              	100.00%		Q5JI19              	100.00%
                    	       		Q5JIU7              	18.25%
Bootstrap support for B3LBC5 as seed ortholog is 100%.
Bootstrap support for Q5JI19 as seed ortholog is 100%.

Group of orthologs #212. Best score 59 bits
Score difference with first non-orthologous sequence - P.knowlesi:59 P.kodakaraensis:59

B3L1V2              	100.00%		Q5JE35              	100.00%
Bootstrap support for B3L1V2 as seed ortholog is 100%.
Bootstrap support for Q5JE35 as seed ortholog is 100%.

Group of orthologs #213. Best score 59 bits
Score difference with first non-orthologous sequence - P.knowlesi:59 P.kodakaraensis:59

B3L4F6              	100.00%		Q5JE51              	100.00%
Bootstrap support for B3L4F6 as seed ortholog is 100%.
Bootstrap support for Q5JE51 as seed ortholog is 100%.

Group of orthologs #214. Best score 59 bits
Score difference with first non-orthologous sequence - P.knowlesi:59 P.kodakaraensis:59

B3L7M5              	100.00%		Q5JJH0              	100.00%
Bootstrap support for B3L7M5 as seed ortholog is 100%.
Bootstrap support for Q5JJH0 as seed ortholog is 100%.

Group of orthologs #215. Best score 58 bits
Score difference with first non-orthologous sequence - P.knowlesi:58 P.kodakaraensis:58

B3L376              	100.00%		Q5JFS0              	100.00%
                    	       		Q5JI38              	13.59%
Bootstrap support for B3L376 as seed ortholog is 100%.
Bootstrap support for Q5JFS0 as seed ortholog is 100%.

Group of orthologs #216. Best score 58 bits
Score difference with first non-orthologous sequence - P.knowlesi:9 P.kodakaraensis:58

B3LBK6              	100.00%		Q5JEA0              	100.00%
Bootstrap support for B3LBK6 as seed ortholog is 66%.
Alternative seed ortholog is B3L1E1 (9 bits away from this cluster)
Bootstrap support for Q5JEA0 as seed ortholog is 100%.

Group of orthologs #217. Best score 57 bits
Score difference with first non-orthologous sequence - P.knowlesi:9 P.kodakaraensis:57

B3L0S1              	100.00%		Q5JH80              	100.00%
Bootstrap support for B3L0S1 as seed ortholog is 66%.
Alternative seed ortholog is B3L963 (9 bits away from this cluster)
Bootstrap support for Q5JH80 as seed ortholog is 100%.

Group of orthologs #218. Best score 57 bits
Score difference with first non-orthologous sequence - P.knowlesi:57 P.kodakaraensis:57

B3L593              	100.00%		Q76CZ2              	100.00%
Bootstrap support for B3L593 as seed ortholog is 100%.
Bootstrap support for Q76CZ2 as seed ortholog is 100%.

Group of orthologs #219. Best score 56 bits
Score difference with first non-orthologous sequence - P.knowlesi:56 P.kodakaraensis:56

B3L5N0              	100.00%		Q5JIB4              	100.00%
Bootstrap support for B3L5N0 as seed ortholog is 100%.
Bootstrap support for Q5JIB4 as seed ortholog is 100%.

Group of orthologs #220. Best score 56 bits
Score difference with first non-orthologous sequence - P.knowlesi:56 P.kodakaraensis:56

B3L671              	100.00%		Q5JIY8              	100.00%
Bootstrap support for B3L671 as seed ortholog is 100%.
Bootstrap support for Q5JIY8 as seed ortholog is 100%.

Group of orthologs #221. Best score 55 bits
Score difference with first non-orthologous sequence - P.knowlesi:55 P.kodakaraensis:55

B3L231              	100.00%		Q5JIC9              	100.00%
B3L9G5              	7.94%		Q5JHD3              	8.05%
Bootstrap support for B3L231 as seed ortholog is 100%.
Bootstrap support for Q5JIC9 as seed ortholog is 100%.

Group of orthologs #222. Best score 55 bits
Score difference with first non-orthologous sequence - P.knowlesi:55 P.kodakaraensis:55

B3L5N9              	100.00%		Q5JH78              	100.00%
Bootstrap support for B3L5N9 as seed ortholog is 100%.
Bootstrap support for Q5JH78 as seed ortholog is 100%.

Group of orthologs #223. Best score 55 bits
Score difference with first non-orthologous sequence - P.knowlesi:55 P.kodakaraensis:55

B3L4C5              	100.00%		Q5JJG9              	100.00%
Bootstrap support for B3L4C5 as seed ortholog is 100%.
Bootstrap support for Q5JJG9 as seed ortholog is 100%.

Group of orthologs #224. Best score 54 bits
Score difference with first non-orthologous sequence - P.knowlesi:54 P.kodakaraensis:54

B3KZG4              	100.00%		Q5JG26              	100.00%
Bootstrap support for B3KZG4 as seed ortholog is 100%.
Bootstrap support for Q5JG26 as seed ortholog is 100%.

Group of orthologs #225. Best score 53 bits
Score difference with first non-orthologous sequence - P.knowlesi:53 P.kodakaraensis:53

B3KZ52              	100.00%		Q5JJF7              	100.00%
Bootstrap support for B3KZ52 as seed ortholog is 100%.
Bootstrap support for Q5JJF7 as seed ortholog is 100%.

Group of orthologs #226. Best score 52 bits
Score difference with first non-orthologous sequence - P.knowlesi:52 P.kodakaraensis:52

B3KZ11              	100.00%		Q5JIE1              	100.00%
Bootstrap support for B3KZ11 as seed ortholog is 100%.
Bootstrap support for Q5JIE1 as seed ortholog is 100%.

Group of orthologs #227. Best score 52 bits
Score difference with first non-orthologous sequence - P.knowlesi:52 P.kodakaraensis:52

B3LAU3              	100.00%		Q5JDC4              	100.00%
Bootstrap support for B3LAU3 as seed ortholog is 100%.
Bootstrap support for Q5JDC4 as seed ortholog is 100%.

Group of orthologs #228. Best score 51 bits
Score difference with first non-orthologous sequence - P.knowlesi:51 P.kodakaraensis:51

B3L7N6              	100.00%		Q5JGZ7              	100.00%
                    	       		Q5JFG7              	5.96%
Bootstrap support for B3L7N6 as seed ortholog is 100%.
Bootstrap support for Q5JGZ7 as seed ortholog is 100%.

Group of orthologs #229. Best score 51 bits
Score difference with first non-orthologous sequence - P.knowlesi:51 P.kodakaraensis:51

B3L1Z3              	100.00%		Q5JDB0              	100.00%
Bootstrap support for B3L1Z3 as seed ortholog is 100%.
Bootstrap support for Q5JDB0 as seed ortholog is 100%.

Group of orthologs #230. Best score 51 bits
Score difference with first non-orthologous sequence - P.knowlesi:51 P.kodakaraensis:51

B3KZ04              	100.00%		Q5JJG2              	100.00%
Bootstrap support for B3KZ04 as seed ortholog is 100%.
Bootstrap support for Q5JJG2 as seed ortholog is 100%.

Group of orthologs #231. Best score 51 bits
Score difference with first non-orthologous sequence - P.knowlesi:51 P.kodakaraensis:51

B3L8G9              	100.00%		Q5JHQ2              	100.00%
Bootstrap support for B3L8G9 as seed ortholog is 100%.
Bootstrap support for Q5JHQ2 as seed ortholog is 100%.

Group of orthologs #232. Best score 49 bits
Score difference with first non-orthologous sequence - P.knowlesi:6 P.kodakaraensis:49

B3L194              	100.00%		Q5JIE0              	100.00%
Bootstrap support for B3L194 as seed ortholog is 62%.
Alternative seed ortholog is B3L8Y5 (6 bits away from this cluster)
Bootstrap support for Q5JIE0 as seed ortholog is 100%.

Group of orthologs #233. Best score 49 bits
Score difference with first non-orthologous sequence - P.knowlesi:49 P.kodakaraensis:49

B3L9J6              	100.00%		Q5JHB2              	100.00%
Bootstrap support for B3L9J6 as seed ortholog is 100%.
Bootstrap support for Q5JHB2 as seed ortholog is 100%.

Group of orthologs #234. Best score 48 bits
Score difference with first non-orthologous sequence - P.knowlesi:48 P.kodakaraensis:48

B3L319              	100.00%		Q5JDS0              	100.00%
Bootstrap support for B3L319 as seed ortholog is 100%.
Bootstrap support for Q5JDS0 as seed ortholog is 100%.

Group of orthologs #235. Best score 48 bits
Score difference with first non-orthologous sequence - P.knowlesi:48 P.kodakaraensis:48

B3L9B3              	100.00%		Q5JDR9              	100.00%
Bootstrap support for B3L9B3 as seed ortholog is 100%.
Bootstrap support for Q5JDR9 as seed ortholog is 100%.

Group of orthologs #236. Best score 47 bits
Score difference with first non-orthologous sequence - P.knowlesi:47 P.kodakaraensis:47

B3L5W9              	100.00%		Q5JHT3              	100.00%
Bootstrap support for B3L5W9 as seed ortholog is 100%.
Bootstrap support for Q5JHT3 as seed ortholog is 100%.

Group of orthologs #237. Best score 47 bits
Score difference with first non-orthologous sequence - P.knowlesi:47 P.kodakaraensis:47

B3LBP5              	100.00%		Q5JE50              	100.00%
Bootstrap support for B3LBP5 as seed ortholog is 100%.
Bootstrap support for Q5JE50 as seed ortholog is 100%.

Group of orthologs #238. Best score 47 bits
Score difference with first non-orthologous sequence - P.knowlesi:47 P.kodakaraensis:47

B3LBQ0              	100.00%		Q5JHA3              	100.00%
Bootstrap support for B3LBQ0 as seed ortholog is 100%.
Bootstrap support for Q5JHA3 as seed ortholog is 100%.

Group of orthologs #239. Best score 46 bits
Score difference with first non-orthologous sequence - P.knowlesi:46 P.kodakaraensis:46

B3L0P1              	100.00%		Q5JFL6              	100.00%
Bootstrap support for B3L0P1 as seed ortholog is 100%.
Bootstrap support for Q5JFL6 as seed ortholog is 100%.

Group of orthologs #240. Best score 46 bits
Score difference with first non-orthologous sequence - P.knowlesi:46 P.kodakaraensis:46

B3LCM5              	100.00%		Q5JIB2              	100.00%
Bootstrap support for B3LCM5 as seed ortholog is 100%.
Bootstrap support for Q5JIB2 as seed ortholog is 100%.

Group of orthologs #241. Best score 45 bits
Score difference with first non-orthologous sequence - P.knowlesi:45 P.kodakaraensis:45

B3L5K5              	100.00%		Q5JIR4              	100.00%
Bootstrap support for B3L5K5 as seed ortholog is 100%.
Bootstrap support for Q5JIR4 as seed ortholog is 100%.

Group of orthologs #242. Best score 44 bits
Score difference with first non-orthologous sequence - P.knowlesi:44 P.kodakaraensis:44

B3L297              	100.00%		Q5JDB7              	100.00%
B3LCQ3              	13.50%		
Bootstrap support for B3L297 as seed ortholog is 100%.
Bootstrap support for Q5JDB7 as seed ortholog is 100%.

Group of orthologs #243. Best score 44 bits
Score difference with first non-orthologous sequence - P.knowlesi:44 P.kodakaraensis:44

B3L6D8              	100.00%		Q5JHF4              	100.00%
Bootstrap support for B3L6D8 as seed ortholog is 100%.
Bootstrap support for Q5JHF4 as seed ortholog is 100%.

Group of orthologs #244. Best score 43 bits
Score difference with first non-orthologous sequence - P.knowlesi:43 P.kodakaraensis:43

B3L1B5              	100.00%		Q5JDL4              	100.00%
Bootstrap support for B3L1B5 as seed ortholog is 100%.
Bootstrap support for Q5JDL4 as seed ortholog is 100%.

Group of orthologs #245. Best score 43 bits
Score difference with first non-orthologous sequence - P.knowlesi:43 P.kodakaraensis:43

B3L7C7              	100.00%		Q5JF52              	100.00%
Bootstrap support for B3L7C7 as seed ortholog is 100%.
Bootstrap support for Q5JF52 as seed ortholog is 100%.

Group of orthologs #246. Best score 43 bits
Score difference with first non-orthologous sequence - P.knowlesi:43 P.kodakaraensis:43

B3L9L6              	100.00%		Q5JGN8              	100.00%
Bootstrap support for B3L9L6 as seed ortholog is 100%.
Bootstrap support for Q5JGN8 as seed ortholog is 100%.

Group of orthologs #247. Best score 42 bits
Score difference with first non-orthologous sequence - P.knowlesi:42 P.kodakaraensis:42

B3L7D2              	100.00%		Q5JGM7              	100.00%
Bootstrap support for B3L7D2 as seed ortholog is 100%.
Bootstrap support for Q5JGM7 as seed ortholog is 100%.