###################################
192 groups of orthologs
234 in-paralogs from P.jiroveci
205 in-paralogs from T.yellowstonii
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 779 bits
Score difference with first non-orthologous sequence - P.jiroveci:779 T.yellowstonii:779

L0P7C3              	100.00%		B5YLE4              	100.00%
Bootstrap support for L0P7C3 as seed ortholog is 100%.
Bootstrap support for B5YLE4 as seed ortholog is 100%.

Group of orthologs #2. Best score 747 bits
Score difference with first non-orthologous sequence - P.jiroveci:183 T.yellowstonii:747

L0PFS2              	100.00%		B5YH59              	100.00%
Bootstrap support for L0PFS2 as seed ortholog is 100%.
Bootstrap support for B5YH59 as seed ortholog is 100%.

Group of orthologs #3. Best score 718 bits
Score difference with first non-orthologous sequence - P.jiroveci:718 T.yellowstonii:456

L0P9C7              	100.00%		B5YI87              	100.00%
Bootstrap support for L0P9C7 as seed ortholog is 100%.
Bootstrap support for B5YI87 as seed ortholog is 100%.

Group of orthologs #4. Best score 704 bits
Score difference with first non-orthologous sequence - P.jiroveci:704 T.yellowstonii:704

L0PF80              	100.00%		B5YJQ7              	100.00%
Bootstrap support for L0PF80 as seed ortholog is 100%.
Bootstrap support for B5YJQ7 as seed ortholog is 100%.

Group of orthologs #5. Best score 667 bits
Score difference with first non-orthologous sequence - P.jiroveci:190 T.yellowstonii:667

L0PDB3              	100.00%		B5YKF7              	100.00%
Bootstrap support for L0PDB3 as seed ortholog is 99%.
Bootstrap support for B5YKF7 as seed ortholog is 100%.

Group of orthologs #6. Best score 629 bits
Score difference with first non-orthologous sequence - P.jiroveci:237 T.yellowstonii:497

L0P833              	100.00%		B5YI22              	100.00%
Bootstrap support for L0P833 as seed ortholog is 100%.
Bootstrap support for B5YI22 as seed ortholog is 100%.

Group of orthologs #7. Best score 557 bits
Score difference with first non-orthologous sequence - P.jiroveci:323 T.yellowstonii:557

L0PCD8              	100.00%		B5YJT1              	100.00%
Bootstrap support for L0PCD8 as seed ortholog is 100%.
Bootstrap support for B5YJT1 as seed ortholog is 100%.

Group of orthologs #8. Best score 556 bits
Score difference with first non-orthologous sequence - P.jiroveci:556 T.yellowstonii:556

L0PAQ1              	100.00%		B5YHY9              	100.00%
Bootstrap support for L0PAQ1 as seed ortholog is 100%.
Bootstrap support for B5YHY9 as seed ortholog is 100%.

Group of orthologs #9. Best score 555 bits
Score difference with first non-orthologous sequence - P.jiroveci:555 T.yellowstonii:555

L0P9H4              	100.00%		B5YK47              	100.00%
Bootstrap support for L0P9H4 as seed ortholog is 100%.
Bootstrap support for B5YK47 as seed ortholog is 100%.

Group of orthologs #10. Best score 538 bits
Score difference with first non-orthologous sequence - P.jiroveci:458 T.yellowstonii:538

L0PDM6              	100.00%		B5YJN3              	100.00%
Bootstrap support for L0PDM6 as seed ortholog is 100%.
Bootstrap support for B5YJN3 as seed ortholog is 100%.

Group of orthologs #11. Best score 515 bits
Score difference with first non-orthologous sequence - P.jiroveci:345 T.yellowstonii:367

L0P9G2              	100.00%		B5YFW5              	100.00%
Bootstrap support for L0P9G2 as seed ortholog is 100%.
Bootstrap support for B5YFW5 as seed ortholog is 100%.

Group of orthologs #12. Best score 512 bits
Score difference with first non-orthologous sequence - P.jiroveci:512 T.yellowstonii:512

L0PDQ4              	100.00%		B5YJG4              	100.00%
Bootstrap support for L0PDQ4 as seed ortholog is 100%.
Bootstrap support for B5YJG4 as seed ortholog is 100%.

Group of orthologs #13. Best score 502 bits
Score difference with first non-orthologous sequence - P.jiroveci:502 T.yellowstonii:502

L0PCP1              	100.00%		B5YJL3              	100.00%
Bootstrap support for L0PCP1 as seed ortholog is 100%.
Bootstrap support for B5YJL3 as seed ortholog is 100%.

Group of orthologs #14. Best score 496 bits
Score difference with first non-orthologous sequence - P.jiroveci:408 T.yellowstonii:496

L0PBN1              	100.00%		B5YLA8              	100.00%
Bootstrap support for L0PBN1 as seed ortholog is 100%.
Bootstrap support for B5YLA8 as seed ortholog is 100%.

Group of orthologs #15. Best score 486 bits
Score difference with first non-orthologous sequence - P.jiroveci:486 T.yellowstonii:486

L0PBG8              	100.00%		B5YHC9              	100.00%
Bootstrap support for L0PBG8 as seed ortholog is 100%.
Bootstrap support for B5YHC9 as seed ortholog is 100%.

Group of orthologs #16. Best score 465 bits
Score difference with first non-orthologous sequence - P.jiroveci:465 T.yellowstonii:465

L0PEK9              	100.00%		B5YKD3              	100.00%
                    	       		B5YK35              	5.30%
Bootstrap support for L0PEK9 as seed ortholog is 100%.
Bootstrap support for B5YKD3 as seed ortholog is 100%.

Group of orthologs #17. Best score 450 bits
Score difference with first non-orthologous sequence - P.jiroveci:450 T.yellowstonii:450

L0PC65              	100.00%		B5YGT4              	100.00%
Bootstrap support for L0PC65 as seed ortholog is 100%.
Bootstrap support for B5YGT4 as seed ortholog is 100%.

Group of orthologs #18. Best score 447 bits
Score difference with first non-orthologous sequence - P.jiroveci:50 T.yellowstonii:447

L0PCW9              	100.00%		B5YJK0              	100.00%
                    	       		B5YJF3              	5.25%
Bootstrap support for L0PCW9 as seed ortholog is 83%.
Bootstrap support for B5YJK0 as seed ortholog is 100%.

Group of orthologs #19. Best score 431 bits
Score difference with first non-orthologous sequence - P.jiroveci:159 T.yellowstonii:431

L0P9U5              	100.00%		B5YLD2              	100.00%
Bootstrap support for L0P9U5 as seed ortholog is 99%.
Bootstrap support for B5YLD2 as seed ortholog is 100%.

Group of orthologs #20. Best score 419 bits
Score difference with first non-orthologous sequence - P.jiroveci:305 T.yellowstonii:419

L0PDC9              	100.00%		B5YI24              	100.00%
Bootstrap support for L0PDC9 as seed ortholog is 100%.
Bootstrap support for B5YI24 as seed ortholog is 100%.

Group of orthologs #21. Best score 411 bits
Score difference with first non-orthologous sequence - P.jiroveci:411 T.yellowstonii:411

L0PEX5              	100.00%		B5YHD3              	100.00%
Bootstrap support for L0PEX5 as seed ortholog is 100%.
Bootstrap support for B5YHD3 as seed ortholog is 100%.

Group of orthologs #22. Best score 408 bits
Score difference with first non-orthologous sequence - P.jiroveci:268 T.yellowstonii:408

L0PG75              	100.00%		B5YHT8              	100.00%
Bootstrap support for L0PG75 as seed ortholog is 100%.
Bootstrap support for B5YHT8 as seed ortholog is 100%.

Group of orthologs #23. Best score 391 bits
Score difference with first non-orthologous sequence - P.jiroveci:136 T.yellowstonii:391

L0PBP8              	100.00%		B5YJI2              	100.00%
Bootstrap support for L0PBP8 as seed ortholog is 99%.
Bootstrap support for B5YJI2 as seed ortholog is 100%.

Group of orthologs #24. Best score 389 bits
Score difference with first non-orthologous sequence - P.jiroveci:389 T.yellowstonii:389

L0PBR9              	100.00%		B5YHE2              	100.00%
Bootstrap support for L0PBR9 as seed ortholog is 100%.
Bootstrap support for B5YHE2 as seed ortholog is 100%.

Group of orthologs #25. Best score 386 bits
Score difference with first non-orthologous sequence - P.jiroveci:386 T.yellowstonii:215

L0PB96              	100.00%		B5YL34              	100.00%
                    	       		B5YKI5              	25.24%
Bootstrap support for L0PB96 as seed ortholog is 100%.
Bootstrap support for B5YL34 as seed ortholog is 100%.

Group of orthologs #26. Best score 386 bits
Score difference with first non-orthologous sequence - P.jiroveci:386 T.yellowstonii:386

L0PE57              	100.00%		B5YLE7              	100.00%
Bootstrap support for L0PE57 as seed ortholog is 100%.
Bootstrap support for B5YLE7 as seed ortholog is 100%.

Group of orthologs #27. Best score 376 bits
Score difference with first non-orthologous sequence - P.jiroveci:376 T.yellowstonii:376

L0PAS8              	100.00%		B5YHS5              	100.00%
Bootstrap support for L0PAS8 as seed ortholog is 100%.
Bootstrap support for B5YHS5 as seed ortholog is 100%.

Group of orthologs #28. Best score 366 bits
Score difference with first non-orthologous sequence - P.jiroveci:224 T.yellowstonii:366

L0PGH3              	100.00%		B5YID6              	100.00%
Bootstrap support for L0PGH3 as seed ortholog is 99%.
Bootstrap support for B5YID6 as seed ortholog is 100%.

Group of orthologs #29. Best score 365 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 T.yellowstonii:365

L0PFG7              	100.00%		B5YLD6              	100.00%
Bootstrap support for L0PFG7 as seed ortholog is 99%.
Bootstrap support for B5YLD6 as seed ortholog is 100%.

Group of orthologs #30. Best score 359 bits
Score difference with first non-orthologous sequence - P.jiroveci:210 T.yellowstonii:359

L0P8W4              	100.00%		B5YJP5              	100.00%
Bootstrap support for L0P8W4 as seed ortholog is 100%.
Bootstrap support for B5YJP5 as seed ortholog is 100%.

Group of orthologs #31. Best score 344 bits
Score difference with first non-orthologous sequence - P.jiroveci:344 T.yellowstonii:344

L0PFY1              	100.00%		B5YKK9              	100.00%
Bootstrap support for L0PFY1 as seed ortholog is 100%.
Bootstrap support for B5YKK9 as seed ortholog is 100%.

Group of orthologs #32. Best score 343 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 T.yellowstonii:343

L0PIP5              	100.00%		B5YJY3              	100.00%
Bootstrap support for L0PIP5 as seed ortholog is 96%.
Bootstrap support for B5YJY3 as seed ortholog is 100%.

Group of orthologs #33. Best score 337 bits
Score difference with first non-orthologous sequence - P.jiroveci:337 T.yellowstonii:337

L0PCX1              	100.00%		B5YFZ0              	100.00%
Bootstrap support for L0PCX1 as seed ortholog is 100%.
Bootstrap support for B5YFZ0 as seed ortholog is 100%.

Group of orthologs #34. Best score 319 bits
Score difference with first non-orthologous sequence - P.jiroveci:319 T.yellowstonii:319

L0P7N3              	100.00%		B5YHZ0              	100.00%
Bootstrap support for L0P7N3 as seed ortholog is 100%.
Bootstrap support for B5YHZ0 as seed ortholog is 100%.

Group of orthologs #35. Best score 316 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 T.yellowstonii:316

L0PA88              	100.00%		B5YJ14              	100.00%
Bootstrap support for L0PA88 as seed ortholog is 100%.
Bootstrap support for B5YJ14 as seed ortholog is 100%.

Group of orthologs #36. Best score 315 bits
Score difference with first non-orthologous sequence - P.jiroveci:315 T.yellowstonii:167

L0PB68              	100.00%		B5YFP4              	100.00%
Bootstrap support for L0PB68 as seed ortholog is 100%.
Bootstrap support for B5YFP4 as seed ortholog is 99%.

Group of orthologs #37. Best score 309 bits
Score difference with first non-orthologous sequence - P.jiroveci:309 T.yellowstonii:309

L0PB90              	100.00%		B5YFV7              	100.00%
L0PB43              	14.13%		
Bootstrap support for L0PB90 as seed ortholog is 100%.
Bootstrap support for B5YFV7 as seed ortholog is 100%.

Group of orthologs #38. Best score 308 bits
Score difference with first non-orthologous sequence - P.jiroveci:308 T.yellowstonii:308

L0PDJ1              	100.00%		B5YHE1              	100.00%
Bootstrap support for L0PDJ1 as seed ortholog is 100%.
Bootstrap support for B5YHE1 as seed ortholog is 100%.

Group of orthologs #39. Best score 305 bits
Score difference with first non-orthologous sequence - P.jiroveci:305 T.yellowstonii:305

L0PDI1              	100.00%		B5YGD2              	100.00%
Bootstrap support for L0PDI1 as seed ortholog is 100%.
Bootstrap support for B5YGD2 as seed ortholog is 100%.

Group of orthologs #40. Best score 305 bits
Score difference with first non-orthologous sequence - P.jiroveci:305 T.yellowstonii:177

L0PFN4              	100.00%		B5YL41              	100.00%
Bootstrap support for L0PFN4 as seed ortholog is 100%.
Bootstrap support for B5YL41 as seed ortholog is 99%.

Group of orthologs #41. Best score 288 bits
Score difference with first non-orthologous sequence - P.jiroveci:288 T.yellowstonii:288

L0PG77              	100.00%		B5YFV8              	100.00%
L0P9P7              	7.14%		
Bootstrap support for L0PG77 as seed ortholog is 100%.
Bootstrap support for B5YFV8 as seed ortholog is 100%.

Group of orthologs #42. Best score 280 bits
Score difference with first non-orthologous sequence - P.jiroveci:172 T.yellowstonii:280

L0P6V9              	100.00%		B5YG56              	100.00%
Bootstrap support for L0P6V9 as seed ortholog is 100%.
Bootstrap support for B5YG56 as seed ortholog is 100%.

Group of orthologs #43. Best score 275 bits
Score difference with first non-orthologous sequence - P.jiroveci:275 T.yellowstonii:275

L0P7Y5              	100.00%		B5YKS0              	100.00%
Bootstrap support for L0P7Y5 as seed ortholog is 100%.
Bootstrap support for B5YKS0 as seed ortholog is 100%.

Group of orthologs #44. Best score 274 bits
Score difference with first non-orthologous sequence - P.jiroveci:274 T.yellowstonii:274

L0PES7              	100.00%		B5YH23              	100.00%
Bootstrap support for L0PES7 as seed ortholog is 100%.
Bootstrap support for B5YH23 as seed ortholog is 100%.

Group of orthologs #45. Best score 272 bits
Score difference with first non-orthologous sequence - P.jiroveci:272 T.yellowstonii:272

L0PDV1              	100.00%		B5YIG1              	100.00%
Bootstrap support for L0PDV1 as seed ortholog is 100%.
Bootstrap support for B5YIG1 as seed ortholog is 100%.

Group of orthologs #46. Best score 268 bits
Score difference with first non-orthologous sequence - P.jiroveci:268 T.yellowstonii:268

L0P7Z6              	100.00%		B5YHX4              	100.00%
Bootstrap support for L0P7Z6 as seed ortholog is 100%.
Bootstrap support for B5YHX4 as seed ortholog is 100%.

Group of orthologs #47. Best score 266 bits
Score difference with first non-orthologous sequence - P.jiroveci:266 T.yellowstonii:266

L0PBN0              	100.00%		B5YLE5              	100.00%
Bootstrap support for L0PBN0 as seed ortholog is 100%.
Bootstrap support for B5YLE5 as seed ortholog is 100%.

Group of orthologs #48. Best score 265 bits
Score difference with first non-orthologous sequence - P.jiroveci:265 T.yellowstonii:265

L0P9A8              	100.00%		B5YJ07              	100.00%
L0PHB9              	100.00%		
Bootstrap support for L0P9A8 as seed ortholog is 100%.
Bootstrap support for L0PHB9 as seed ortholog is 100%.
Bootstrap support for B5YJ07 as seed ortholog is 100%.

Group of orthologs #49. Best score 264 bits
Score difference with first non-orthologous sequence - P.jiroveci:264 T.yellowstonii:264

L0P6Y2              	100.00%		B5YFS4              	100.00%
Bootstrap support for L0P6Y2 as seed ortholog is 100%.
Bootstrap support for B5YFS4 as seed ortholog is 100%.

Group of orthologs #50. Best score 258 bits
Score difference with first non-orthologous sequence - P.jiroveci:258 T.yellowstonii:258

L0PGV2              	100.00%		B5YL60              	100.00%
L0PG40              	61.15%		
Bootstrap support for L0PGV2 as seed ortholog is 100%.
Bootstrap support for B5YL60 as seed ortholog is 100%.

Group of orthologs #51. Best score 248 bits
Score difference with first non-orthologous sequence - P.jiroveci:248 T.yellowstonii:117

L0PFN9              	100.00%		B5YI83              	100.00%
L0PEF0              	28.86%		
Bootstrap support for L0PFN9 as seed ortholog is 100%.
Bootstrap support for B5YI83 as seed ortholog is 99%.

Group of orthologs #52. Best score 247 bits
Score difference with first non-orthologous sequence - P.jiroveci:247 T.yellowstonii:247

L0P7B5              	100.00%		B5YJV1              	100.00%
Bootstrap support for L0P7B5 as seed ortholog is 100%.
Bootstrap support for B5YJV1 as seed ortholog is 100%.

Group of orthologs #53. Best score 246 bits
Score difference with first non-orthologous sequence - P.jiroveci:33 T.yellowstonii:246

L0PAU1              	100.00%		B5YGU2              	100.00%
Bootstrap support for L0PAU1 as seed ortholog is 79%.
Bootstrap support for B5YGU2 as seed ortholog is 100%.

Group of orthologs #54. Best score 239 bits
Score difference with first non-orthologous sequence - P.jiroveci:239 T.yellowstonii:239

L0PEE3              	100.00%		B5YJV6              	100.00%
Bootstrap support for L0PEE3 as seed ortholog is 100%.
Bootstrap support for B5YJV6 as seed ortholog is 100%.

Group of orthologs #55. Best score 237 bits
Score difference with first non-orthologous sequence - P.jiroveci:237 T.yellowstonii:237

L0PG02              	100.00%		B5YLE2              	100.00%
Bootstrap support for L0PG02 as seed ortholog is 100%.
Bootstrap support for B5YLE2 as seed ortholog is 100%.

Group of orthologs #56. Best score 227 bits
Score difference with first non-orthologous sequence - P.jiroveci:227 T.yellowstonii:227

L0PBY6              	100.00%		B5YHG0              	100.00%
                    	       		B5YGJ2              	32.35%
Bootstrap support for L0PBY6 as seed ortholog is 100%.
Bootstrap support for B5YHG0 as seed ortholog is 100%.

Group of orthologs #57. Best score 227 bits
Score difference with first non-orthologous sequence - P.jiroveci:227 T.yellowstonii:95

L0PGW6              	100.00%		B5YIQ7              	100.00%
Bootstrap support for L0PGW6 as seed ortholog is 100%.
Bootstrap support for B5YIQ7 as seed ortholog is 99%.

Group of orthologs #58. Best score 226 bits
Score difference with first non-orthologous sequence - P.jiroveci:226 T.yellowstonii:226

L0PFN8              	100.00%		B5YFN3              	100.00%
Bootstrap support for L0PFN8 as seed ortholog is 100%.
Bootstrap support for B5YFN3 as seed ortholog is 100%.

Group of orthologs #59. Best score 225 bits
Score difference with first non-orthologous sequence - P.jiroveci:225 T.yellowstonii:225

L0P9Y7              	100.00%		B5YJZ4              	100.00%
Bootstrap support for L0P9Y7 as seed ortholog is 100%.
Bootstrap support for B5YJZ4 as seed ortholog is 100%.

Group of orthologs #60. Best score 224 bits
Score difference with first non-orthologous sequence - P.jiroveci:224 T.yellowstonii:224

L0PBY9              	100.00%		B5YKW0              	100.00%
Bootstrap support for L0PBY9 as seed ortholog is 100%.
Bootstrap support for B5YKW0 as seed ortholog is 100%.

Group of orthologs #61. Best score 219 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 T.yellowstonii:219

L0PAA4              	100.00%		B5YJM2              	100.00%
Bootstrap support for L0PAA4 as seed ortholog is 98%.
Bootstrap support for B5YJM2 as seed ortholog is 100%.

Group of orthologs #62. Best score 219 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 T.yellowstonii:219

L0PG51              	100.00%		B5YH58              	100.00%
Bootstrap support for L0PG51 as seed ortholog is 92%.
Bootstrap support for B5YH58 as seed ortholog is 100%.

Group of orthologs #63. Best score 211 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 T.yellowstonii:211

L0PBL6              	100.00%		B5YIF1              	100.00%
Bootstrap support for L0PBL6 as seed ortholog is 99%.
Bootstrap support for B5YIF1 as seed ortholog is 100%.

Group of orthologs #64. Best score 204 bits
Score difference with first non-orthologous sequence - P.jiroveci:204 T.yellowstonii:204

L0PEY2              	100.00%		B5YJW7              	100.00%
Bootstrap support for L0PEY2 as seed ortholog is 100%.
Bootstrap support for B5YJW7 as seed ortholog is 100%.

Group of orthologs #65. Best score 198 bits
Score difference with first non-orthologous sequence - P.jiroveci:41 T.yellowstonii:198

L0PG10              	100.00%		B5YHR4              	100.00%
Bootstrap support for L0PG10 as seed ortholog is 88%.
Bootstrap support for B5YHR4 as seed ortholog is 100%.

Group of orthologs #66. Best score 197 bits
Score difference with first non-orthologous sequence - P.jiroveci:197 T.yellowstonii:197

L0PDK3              	100.00%		B5YFV5              	100.00%
Bootstrap support for L0PDK3 as seed ortholog is 100%.
Bootstrap support for B5YFV5 as seed ortholog is 100%.

Group of orthologs #67. Best score 195 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 T.yellowstonii:195

L0PBF6              	100.00%		B5YFU5              	100.00%
Bootstrap support for L0PBF6 as seed ortholog is 99%.
Bootstrap support for B5YFU5 as seed ortholog is 100%.

Group of orthologs #68. Best score 192 bits
Score difference with first non-orthologous sequence - P.jiroveci:192 T.yellowstonii:192

L0PG43              	100.00%		B5YLC5              	100.00%
Bootstrap support for L0PG43 as seed ortholog is 100%.
Bootstrap support for B5YLC5 as seed ortholog is 100%.

Group of orthologs #69. Best score 190 bits
Score difference with first non-orthologous sequence - P.jiroveci:190 T.yellowstonii:190

L0PHG9              	100.00%		B5YK82              	100.00%
Bootstrap support for L0PHG9 as seed ortholog is 100%.
Bootstrap support for B5YK82 as seed ortholog is 100%.

Group of orthologs #70. Best score 187 bits
Score difference with first non-orthologous sequence - P.jiroveci:121 T.yellowstonii:187

L0PEA1              	100.00%		B5YL59              	100.00%
Bootstrap support for L0PEA1 as seed ortholog is 99%.
Bootstrap support for B5YL59 as seed ortholog is 100%.

Group of orthologs #71. Best score 186 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 T.yellowstonii:186

L0PD02              	100.00%		B5YK48              	100.00%
Bootstrap support for L0PD02 as seed ortholog is 99%.
Bootstrap support for B5YK48 as seed ortholog is 100%.

Group of orthologs #72. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 T.yellowstonii:171

L0P9P8              	100.00%		B5YHS6              	100.00%
                    	       		B5YI00              	7.31%
Bootstrap support for L0P9P8 as seed ortholog is 100%.
Bootstrap support for B5YHS6 as seed ortholog is 100%.

Group of orthologs #73. Best score 170 bits
Score difference with first non-orthologous sequence - P.jiroveci:170 T.yellowstonii:170

L0P723              	100.00%		B5YJV0              	100.00%
Bootstrap support for L0P723 as seed ortholog is 100%.
Bootstrap support for B5YJV0 as seed ortholog is 100%.

Group of orthologs #74. Best score 170 bits
Score difference with first non-orthologous sequence - P.jiroveci:170 T.yellowstonii:170

L0PF73              	100.00%		B5YL53              	100.00%
Bootstrap support for L0PF73 as seed ortholog is 100%.
Bootstrap support for B5YL53 as seed ortholog is 100%.

Group of orthologs #75. Best score 168 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 T.yellowstonii:168

L0PEA3              	100.00%		B5YG44              	100.00%
Bootstrap support for L0PEA3 as seed ortholog is 96%.
Bootstrap support for B5YG44 as seed ortholog is 100%.

Group of orthologs #76. Best score 167 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 T.yellowstonii:167

L0PFI7              	100.00%		B5YJI4              	100.00%
Bootstrap support for L0PFI7 as seed ortholog is 98%.
Bootstrap support for B5YJI4 as seed ortholog is 100%.

Group of orthologs #77. Best score 167 bits
Score difference with first non-orthologous sequence - P.jiroveci:167 T.yellowstonii:167

L0PHL5              	100.00%		B5YJQ2              	100.00%
Bootstrap support for L0PHL5 as seed ortholog is 100%.
Bootstrap support for B5YJQ2 as seed ortholog is 100%.

Group of orthologs #78. Best score 163 bits
Score difference with first non-orthologous sequence - P.jiroveci:163 T.yellowstonii:163

L0PC06              	100.00%		B5YI38              	100.00%
Bootstrap support for L0PC06 as seed ortholog is 100%.
Bootstrap support for B5YI38 as seed ortholog is 100%.

Group of orthologs #79. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 T.yellowstonii:160

L0PC37              	100.00%		B5YKY3              	100.00%
Bootstrap support for L0PC37 as seed ortholog is 100%.
Bootstrap support for B5YKY3 as seed ortholog is 100%.

Group of orthologs #80. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:45 T.yellowstonii:160

L0PF87              	100.00%		B5YJI6              	100.00%
Bootstrap support for L0PF87 as seed ortholog is 84%.
Bootstrap support for B5YJI6 as seed ortholog is 100%.

Group of orthologs #81. Best score 159 bits
Score difference with first non-orthologous sequence - P.jiroveci:159 T.yellowstonii:159

L0PEZ4              	100.00%		B5YG47              	100.00%
Bootstrap support for L0PEZ4 as seed ortholog is 100%.
Bootstrap support for B5YG47 as seed ortholog is 100%.

Group of orthologs #82. Best score 159 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 T.yellowstonii:159

L0PEX1              	100.00%		B5YHP1              	100.00%
Bootstrap support for L0PEX1 as seed ortholog is 98%.
Bootstrap support for B5YHP1 as seed ortholog is 100%.

Group of orthologs #83. Best score 153 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 T.yellowstonii:153

L0P718              	100.00%		B5YJR8              	100.00%
L0PB83              	11.80%		
L0PGL4              	11.12%		
L0P850              	9.08%		
L0PB85              	6.44%		
Bootstrap support for L0P718 as seed ortholog is 86%.
Bootstrap support for B5YJR8 as seed ortholog is 100%.

Group of orthologs #84. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 T.yellowstonii:151

L0PCI3              	100.00%		B5YKP7              	100.00%
Bootstrap support for L0PCI3 as seed ortholog is 100%.
Bootstrap support for B5YKP7 as seed ortholog is 100%.

Group of orthologs #85. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 T.yellowstonii:149

L0PFS1              	100.00%		B5YI11              	100.00%
Bootstrap support for L0PFS1 as seed ortholog is 100%.
Bootstrap support for B5YI11 as seed ortholog is 100%.

Group of orthologs #86. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 T.yellowstonii:148

L0PAG8              	100.00%		B5YH36              	100.00%
Bootstrap support for L0PAG8 as seed ortholog is 100%.
Bootstrap support for B5YH36 as seed ortholog is 100%.

Group of orthologs #87. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 T.yellowstonii:144

L0PAG1              	100.00%		B5YG99              	100.00%
Bootstrap support for L0PAG1 as seed ortholog is 98%.
Bootstrap support for B5YG99 as seed ortholog is 100%.

Group of orthologs #88. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:33 T.yellowstonii:144

L0PGG0              	100.00%		B5YJJ0              	100.00%
Bootstrap support for L0PGG0 as seed ortholog is 82%.
Bootstrap support for B5YJJ0 as seed ortholog is 100%.

Group of orthologs #89. Best score 141 bits
Score difference with first non-orthologous sequence - P.jiroveci:141 T.yellowstonii:141

L0PDF2              	100.00%		B5YG74              	100.00%
Bootstrap support for L0PDF2 as seed ortholog is 100%.
Bootstrap support for B5YG74 as seed ortholog is 100%.

Group of orthologs #90. Best score 141 bits
Score difference with first non-orthologous sequence - P.jiroveci:141 T.yellowstonii:141

L0PFT7              	100.00%		B5YJI3              	100.00%
Bootstrap support for L0PFT7 as seed ortholog is 100%.
Bootstrap support for B5YJI3 as seed ortholog is 100%.

Group of orthologs #91. Best score 140 bits
Score difference with first non-orthologous sequence - P.jiroveci:140 T.yellowstonii:140

L0PBE8              	100.00%		B5YIL2              	100.00%
Bootstrap support for L0PBE8 as seed ortholog is 100%.
Bootstrap support for B5YIL2 as seed ortholog is 100%.

Group of orthologs #92. Best score 140 bits
Score difference with first non-orthologous sequence - P.jiroveci:140 T.yellowstonii:140

L0PG33              	100.00%		B5YJD5              	100.00%
Bootstrap support for L0PG33 as seed ortholog is 100%.
Bootstrap support for B5YJD5 as seed ortholog is 100%.

Group of orthologs #93. Best score 139 bits
Score difference with first non-orthologous sequence - P.jiroveci:139 T.yellowstonii:139

L0PFX9              	100.00%		B5YKF9              	100.00%
Bootstrap support for L0PFX9 as seed ortholog is 100%.
Bootstrap support for B5YKF9 as seed ortholog is 100%.

Group of orthologs #94. Best score 138 bits
Score difference with first non-orthologous sequence - P.jiroveci:23 T.yellowstonii:48

L0PBY2              	100.00%		B5YHN3              	100.00%
Bootstrap support for L0PBY2 as seed ortholog is 70%.
Alternative seed ortholog is L0P863 (23 bits away from this cluster)
Bootstrap support for B5YHN3 as seed ortholog is 85%.

Group of orthologs #95. Best score 137 bits
Score difference with first non-orthologous sequence - P.jiroveci:137 T.yellowstonii:137

L0PEL2              	100.00%		B5YJZ6              	100.00%
Bootstrap support for L0PEL2 as seed ortholog is 100%.
Bootstrap support for B5YJZ6 as seed ortholog is 100%.

Group of orthologs #96. Best score 136 bits
Score difference with first non-orthologous sequence - P.jiroveci:136 T.yellowstonii:136

L0PF66              	100.00%		B5YKM2              	100.00%
                    	       		B5YG84              	6.60%
Bootstrap support for L0PF66 as seed ortholog is 100%.
Bootstrap support for B5YKM2 as seed ortholog is 100%.

Group of orthologs #97. Best score 134 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 T.yellowstonii:134

L0P8R6              	100.00%		B5YKX8              	100.00%
Bootstrap support for L0P8R6 as seed ortholog is 100%.
Bootstrap support for B5YKX8 as seed ortholog is 100%.

Group of orthologs #98. Best score 134 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 T.yellowstonii:134

L0PFQ3              	100.00%		B5YFM8              	100.00%
Bootstrap support for L0PFQ3 as seed ortholog is 100%.
Bootstrap support for B5YFM8 as seed ortholog is 100%.

Group of orthologs #99. Best score 134 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 T.yellowstonii:134

L0PD68              	100.00%		B5YJ43              	100.00%
Bootstrap support for L0PD68 as seed ortholog is 100%.
Bootstrap support for B5YJ43 as seed ortholog is 100%.

Group of orthologs #100. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 T.yellowstonii:133

L0PB12              	100.00%		B5YFS5              	100.00%
Bootstrap support for L0PB12 as seed ortholog is 100%.
Bootstrap support for B5YFS5 as seed ortholog is 100%.

Group of orthologs #101. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:51 T.yellowstonii:128

L0P903              	100.00%		B5YHD1              	100.00%
                    	       		B5YFM1              	5.54%
Bootstrap support for L0P903 as seed ortholog is 96%.
Bootstrap support for B5YHD1 as seed ortholog is 100%.

Group of orthologs #102. Best score 127 bits
Score difference with first non-orthologous sequence - P.jiroveci:127 T.yellowstonii:127

L0PCK9              	100.00%		B5YH84              	100.00%
Bootstrap support for L0PCK9 as seed ortholog is 100%.
Bootstrap support for B5YH84 as seed ortholog is 100%.

Group of orthologs #103. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 T.yellowstonii:124

L0PCZ5              	100.00%		B5YFW2              	100.00%
Bootstrap support for L0PCZ5 as seed ortholog is 100%.
Bootstrap support for B5YFW2 as seed ortholog is 100%.

Group of orthologs #104. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 T.yellowstonii:119

L0P8Y0              	100.00%		B5YHK5              	100.00%
Bootstrap support for L0P8Y0 as seed ortholog is 100%.
Bootstrap support for B5YHK5 as seed ortholog is 100%.

Group of orthologs #105. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:68 T.yellowstonii:118

L0P8A1              	100.00%		B5YG52              	100.00%
Bootstrap support for L0P8A1 as seed ortholog is 99%.
Bootstrap support for B5YG52 as seed ortholog is 100%.

Group of orthologs #106. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 T.yellowstonii:118

L0PER3              	100.00%		B5YG19              	100.00%
Bootstrap support for L0PER3 as seed ortholog is 100%.
Bootstrap support for B5YG19 as seed ortholog is 100%.

Group of orthologs #107. Best score 115 bits
Score difference with first non-orthologous sequence - P.jiroveci:33 T.yellowstonii:115

L0P905              	100.00%		B5YGH3              	100.00%
Bootstrap support for L0P905 as seed ortholog is 72%.
Alternative seed ortholog is L0PDF1 (33 bits away from this cluster)
Bootstrap support for B5YGH3 as seed ortholog is 100%.

Group of orthologs #108. Best score 114 bits
Score difference with first non-orthologous sequence - P.jiroveci:114 T.yellowstonii:114

L0P8J0              	100.00%		B5YJX0              	100.00%
Bootstrap support for L0P8J0 as seed ortholog is 100%.
Bootstrap support for B5YJX0 as seed ortholog is 100%.

Group of orthologs #109. Best score 114 bits
Score difference with first non-orthologous sequence - P.jiroveci:114 T.yellowstonii:114

L0PF68              	100.00%		B5YJ78              	100.00%
Bootstrap support for L0PF68 as seed ortholog is 100%.
Bootstrap support for B5YJ78 as seed ortholog is 100%.

Group of orthologs #110. Best score 113 bits
Score difference with first non-orthologous sequence - P.jiroveci:113 T.yellowstonii:113

L0PA92              	100.00%		B5YJT4              	100.00%
L0P8X8              	48.44%		
Bootstrap support for L0PA92 as seed ortholog is 100%.
Bootstrap support for B5YJT4 as seed ortholog is 100%.

Group of orthologs #111. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 T.yellowstonii:111

L0PFQ6              	100.00%		B5YGD9              	100.00%
Bootstrap support for L0PFQ6 as seed ortholog is 100%.
Bootstrap support for B5YGD9 as seed ortholog is 100%.

Group of orthologs #112. Best score 110 bits
Score difference with first non-orthologous sequence - P.jiroveci:110 T.yellowstonii:110

L0P8G8              	100.00%		B5YGF7              	100.00%
Bootstrap support for L0P8G8 as seed ortholog is 100%.
Bootstrap support for B5YGF7 as seed ortholog is 100%.

Group of orthologs #113. Best score 110 bits
Score difference with first non-orthologous sequence - P.jiroveci:110 T.yellowstonii:110

L0PBA4              	100.00%		B5YL31              	100.00%
Bootstrap support for L0PBA4 as seed ortholog is 100%.
Bootstrap support for B5YL31 as seed ortholog is 100%.

Group of orthologs #114. Best score 108 bits
Score difference with first non-orthologous sequence - P.jiroveci:108 T.yellowstonii:108

L0PFP9              	100.00%		B5YG32              	100.00%
Bootstrap support for L0PFP9 as seed ortholog is 100%.
Bootstrap support for B5YG32 as seed ortholog is 100%.

Group of orthologs #115. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 T.yellowstonii:107

L0PD52              	100.00%		B5YGH6              	100.00%
L0PDL8              	91.90%		
Bootstrap support for L0PD52 as seed ortholog is 100%.
Bootstrap support for B5YGH6 as seed ortholog is 100%.

Group of orthologs #116. Best score 106 bits
Score difference with first non-orthologous sequence - P.jiroveci:106 T.yellowstonii:106

L0PCK5              	100.00%		B5YJT9              	100.00%
L0PGY9              	59.57%		
L0PA98              	33.95%		
L0P826              	19.60%		
Bootstrap support for L0PCK5 as seed ortholog is 100%.
Bootstrap support for B5YJT9 as seed ortholog is 100%.

Group of orthologs #117. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 T.yellowstonii:104

L0PCW8              	100.00%		B5YJQ6              	100.00%
Bootstrap support for L0PCW8 as seed ortholog is 100%.
Bootstrap support for B5YJQ6 as seed ortholog is 100%.

Group of orthologs #118. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 T.yellowstonii:102

L0PBK3              	100.00%		B5YG35              	100.00%
Bootstrap support for L0PBK3 as seed ortholog is 98%.
Bootstrap support for B5YG35 as seed ortholog is 100%.

Group of orthologs #119. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:102 T.yellowstonii:102

L0PF23              	100.00%		B5YJ33              	100.00%
Bootstrap support for L0PF23 as seed ortholog is 100%.
Bootstrap support for B5YJ33 as seed ortholog is 100%.

Group of orthologs #120. Best score 98 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 T.yellowstonii:98

L0P8T2              	100.00%		B5YG29              	100.00%
L0PA19              	81.95%		
Bootstrap support for L0P8T2 as seed ortholog is 100%.
Bootstrap support for B5YG29 as seed ortholog is 100%.

Group of orthologs #121. Best score 98 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 T.yellowstonii:98

L0P921              	100.00%		B5YIL4              	100.00%
Bootstrap support for L0P921 as seed ortholog is 100%.
Bootstrap support for B5YIL4 as seed ortholog is 100%.

Group of orthologs #122. Best score 97 bits
Score difference with first non-orthologous sequence - P.jiroveci:97 T.yellowstonii:97

L0PGL1              	100.00%		B5YJK8              	100.00%
                    	       		B5YGV3              	12.95%
Bootstrap support for L0PGL1 as seed ortholog is 100%.
Bootstrap support for B5YJK8 as seed ortholog is 100%.

Group of orthologs #123. Best score 97 bits
Score difference with first non-orthologous sequence - P.jiroveci:97 T.yellowstonii:97

L0PCY5              	100.00%		B5YHK1              	100.00%
Bootstrap support for L0PCY5 as seed ortholog is 100%.
Bootstrap support for B5YHK1 as seed ortholog is 100%.

Group of orthologs #124. Best score 97 bits
Score difference with first non-orthologous sequence - P.jiroveci:24 T.yellowstonii:97

L0PFK9              	100.00%		B5YJW3              	100.00%
Bootstrap support for L0PFK9 as seed ortholog is 74%.
Alternative seed ortholog is L0PAA5 (24 bits away from this cluster)
Bootstrap support for B5YJW3 as seed ortholog is 100%.

Group of orthologs #125. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 T.yellowstonii:96

L0PA21              	100.00%		B5YJ66              	100.00%
Bootstrap support for L0PA21 as seed ortholog is 100%.
Bootstrap support for B5YJ66 as seed ortholog is 100%.

Group of orthologs #126. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 T.yellowstonii:94

L0PAW5              	100.00%		B5YG46              	100.00%
Bootstrap support for L0PAW5 as seed ortholog is 100%.
Bootstrap support for B5YG46 as seed ortholog is 100%.

Group of orthologs #127. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 T.yellowstonii:94

L0PDS8              	100.00%		B5YGH9              	100.00%
Bootstrap support for L0PDS8 as seed ortholog is 100%.
Bootstrap support for B5YGH9 as seed ortholog is 100%.

Group of orthologs #128. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 T.yellowstonii:92

L0P8C9              	100.00%		B5YI23              	100.00%
Bootstrap support for L0P8C9 as seed ortholog is 100%.
Bootstrap support for B5YI23 as seed ortholog is 100%.

Group of orthologs #129. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 T.yellowstonii:91

L0P724              	100.00%		B5YG21              	100.00%
Bootstrap support for L0P724 as seed ortholog is 100%.
Bootstrap support for B5YG21 as seed ortholog is 100%.

Group of orthologs #130. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 T.yellowstonii:91

L0PAN5              	100.00%		B5YJ36              	100.00%
Bootstrap support for L0PAN5 as seed ortholog is 100%.
Bootstrap support for B5YJ36 as seed ortholog is 100%.

Group of orthologs #131. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 T.yellowstonii:91

L0PE61              	100.00%		B5YGI4              	100.00%
Bootstrap support for L0PE61 as seed ortholog is 100%.
Bootstrap support for B5YGI4 as seed ortholog is 100%.

Group of orthologs #132. Best score 90 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 T.yellowstonii:90

L0P8P8              	100.00%		B5YHI1              	100.00%
Bootstrap support for L0P8P8 as seed ortholog is 100%.
Bootstrap support for B5YHI1 as seed ortholog is 100%.

Group of orthologs #133. Best score 90 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 T.yellowstonii:90

L0PCU7              	100.00%		B5YK81              	100.00%
Bootstrap support for L0PCU7 as seed ortholog is 100%.
Bootstrap support for B5YK81 as seed ortholog is 100%.

Group of orthologs #134. Best score 90 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 T.yellowstonii:90

L0PIR9              	100.00%		B5YKX4              	100.00%
Bootstrap support for L0PIR9 as seed ortholog is 100%.
Bootstrap support for B5YKX4 as seed ortholog is 100%.

Group of orthologs #135. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 T.yellowstonii:89

L0P7L7              	100.00%		B5YKU6              	100.00%
Bootstrap support for L0P7L7 as seed ortholog is 100%.
Bootstrap support for B5YKU6 as seed ortholog is 100%.

Group of orthologs #136. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 T.yellowstonii:89

L0PFH7              	100.00%		B5YKC3              	100.00%
Bootstrap support for L0PFH7 as seed ortholog is 100%.
Bootstrap support for B5YKC3 as seed ortholog is 100%.

Group of orthologs #137. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 T.yellowstonii:87

L0P838              	100.00%		B5YL18              	100.00%
Bootstrap support for L0P838 as seed ortholog is 100%.
Bootstrap support for B5YL18 as seed ortholog is 100%.

Group of orthologs #138. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 T.yellowstonii:87

L0PEE4              	100.00%		B5YH53              	100.00%
Bootstrap support for L0PEE4 as seed ortholog is 100%.
Bootstrap support for B5YH53 as seed ortholog is 100%.

Group of orthologs #139. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 T.yellowstonii:86

L0PBL4              	100.00%		B5YHQ1              	100.00%
Bootstrap support for L0PBL4 as seed ortholog is 100%.
Bootstrap support for B5YHQ1 as seed ortholog is 100%.

Group of orthologs #140. Best score 85 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 T.yellowstonii:85

L0PDX2              	100.00%		B5YFZ1              	100.00%
Bootstrap support for L0PDX2 as seed ortholog is 100%.
Bootstrap support for B5YFZ1 as seed ortholog is 100%.

Group of orthologs #141. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 T.yellowstonii:84

L0P957              	100.00%		B5YG27              	100.00%
Bootstrap support for L0P957 as seed ortholog is 100%.
Bootstrap support for B5YG27 as seed ortholog is 100%.

Group of orthologs #142. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 T.yellowstonii:84

L0P9H8              	100.00%		B5YKL4              	100.00%
Bootstrap support for L0P9H8 as seed ortholog is 100%.
Bootstrap support for B5YKL4 as seed ortholog is 100%.

Group of orthologs #143. Best score 83 bits
Score difference with first non-orthologous sequence - P.jiroveci:31 T.yellowstonii:83

L0PEW5              	100.00%		B5YGE4              	100.00%
Bootstrap support for L0PEW5 as seed ortholog is 80%.
Bootstrap support for B5YGE4 as seed ortholog is 100%.

Group of orthologs #144. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 T.yellowstonii:82

L0P875              	100.00%		B5YG40              	100.00%
Bootstrap support for L0P875 as seed ortholog is 100%.
Bootstrap support for B5YG40 as seed ortholog is 100%.

Group of orthologs #145. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 T.yellowstonii:79

L0P8C5              	100.00%		B5YFW1              	100.00%
L0P7X3              	59.40%		
Bootstrap support for L0P8C5 as seed ortholog is 100%.
Bootstrap support for B5YFW1 as seed ortholog is 100%.

Group of orthologs #146. Best score 75 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 T.yellowstonii:75

L0PE19              	100.00%		B5YKX9              	100.00%
L0P891              	18.66%		
Bootstrap support for L0PE19 as seed ortholog is 100%.
Bootstrap support for B5YKX9 as seed ortholog is 100%.

Group of orthologs #147. Best score 75 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 T.yellowstonii:75

L0PCN6              	100.00%		B5YK94              	100.00%
Bootstrap support for L0PCN6 as seed ortholog is 100%.
Bootstrap support for B5YK94 as seed ortholog is 100%.

Group of orthologs #148. Best score 73 bits
Score difference with first non-orthologous sequence - P.jiroveci:73 T.yellowstonii:73

L0PBU8              	100.00%		B5YKP1              	100.00%
Bootstrap support for L0PBU8 as seed ortholog is 100%.
Bootstrap support for B5YKP1 as seed ortholog is 100%.

Group of orthologs #149. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 T.yellowstonii:72

L0P834              	100.00%		B5YGA0              	100.00%
Bootstrap support for L0P834 as seed ortholog is 100%.
Bootstrap support for B5YGA0 as seed ortholog is 100%.

Group of orthologs #150. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:11 T.yellowstonii:72

L0P8D1              	100.00%		B5YG51              	100.00%
Bootstrap support for L0P8D1 as seed ortholog is 32%.
Alternative seed ortholog is L0PFI8 (11 bits away from this cluster)
Bootstrap support for B5YG51 as seed ortholog is 100%.

Group of orthologs #151. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 T.yellowstonii:72

L0P8K4              	100.00%		B5YH60              	100.00%
Bootstrap support for L0P8K4 as seed ortholog is 100%.
Bootstrap support for B5YH60 as seed ortholog is 100%.

Group of orthologs #152. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 T.yellowstonii:71

L0P9N4              	100.00%		B5YG48              	100.00%
Bootstrap support for L0P9N4 as seed ortholog is 100%.
Bootstrap support for B5YG48 as seed ortholog is 100%.

Group of orthologs #153. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:9 T.yellowstonii:71

L0PBR8              	100.00%		B5YG25              	100.00%
Bootstrap support for L0PBR8 as seed ortholog is 64%.
Alternative seed ortholog is L0PE58 (9 bits away from this cluster)
Bootstrap support for B5YG25 as seed ortholog is 100%.

Group of orthologs #154. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 T.yellowstonii:71

L0PAL5              	100.00%		B5YJJ3              	100.00%
Bootstrap support for L0PAL5 as seed ortholog is 100%.
Bootstrap support for B5YJJ3 as seed ortholog is 100%.

Group of orthologs #155. Best score 70 bits
Score difference with first non-orthologous sequence - P.jiroveci:70 T.yellowstonii:70

L0P9W7              	100.00%		B5YI85              	100.00%
Bootstrap support for L0P9W7 as seed ortholog is 100%.
Bootstrap support for B5YI85 as seed ortholog is 100%.

Group of orthologs #156. Best score 70 bits
Score difference with first non-orthologous sequence - P.jiroveci:70 T.yellowstonii:70

L0PAS9              	100.00%		B5YHD2              	100.00%
Bootstrap support for L0PAS9 as seed ortholog is 100%.
Bootstrap support for B5YHD2 as seed ortholog is 100%.

Group of orthologs #157. Best score 68 bits
Score difference with first non-orthologous sequence - P.jiroveci:68 T.yellowstonii:68

L0PBS4              	100.00%		B5YG23              	100.00%
Bootstrap support for L0PBS4 as seed ortholog is 100%.
Bootstrap support for B5YG23 as seed ortholog is 100%.

Group of orthologs #158. Best score 68 bits
Score difference with first non-orthologous sequence - P.jiroveci:68 T.yellowstonii:68

L0PE74              	100.00%		B5YL62              	100.00%
Bootstrap support for L0PE74 as seed ortholog is 100%.
Bootstrap support for B5YL62 as seed ortholog is 100%.

Group of orthologs #159. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 T.yellowstonii:67

L0PDS3              	100.00%		B5YHQ6              	100.00%
L0P8A5              	19.05%		
L0PBK7              	18.59%		
Bootstrap support for L0PDS3 as seed ortholog is 100%.
Bootstrap support for B5YHQ6 as seed ortholog is 100%.

Group of orthologs #160. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 T.yellowstonii:66

L0PFH1              	100.00%		B5YIL0              	100.00%
                    	       		B5YI05              	10.39%
Bootstrap support for L0PFH1 as seed ortholog is 100%.
Bootstrap support for B5YIL0 as seed ortholog is 100%.

Group of orthologs #161. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 T.yellowstonii:64

L0PG08              	100.00%		B5YJH1              	100.00%
Bootstrap support for L0PG08 as seed ortholog is 100%.
Bootstrap support for B5YJH1 as seed ortholog is 100%.

Group of orthologs #162. Best score 63 bits
Score difference with first non-orthologous sequence - P.jiroveci:63 T.yellowstonii:63

L0PIT4              	100.00%		B5YK52              	100.00%
                    	       		B5YKB6              	6.83%
Bootstrap support for L0PIT4 as seed ortholog is 100%.
Bootstrap support for B5YK52 as seed ortholog is 100%.

Group of orthologs #163. Best score 63 bits
Score difference with first non-orthologous sequence - P.jiroveci:19 T.yellowstonii:63

L0P9D6              	100.00%		B5YIQ0              	100.00%
Bootstrap support for L0P9D6 as seed ortholog is 69%.
Alternative seed ortholog is L0PC78 (19 bits away from this cluster)
Bootstrap support for B5YIQ0 as seed ortholog is 100%.

Group of orthologs #164. Best score 63 bits
Score difference with first non-orthologous sequence - P.jiroveci:63 T.yellowstonii:63

L0PE02              	100.00%		B5YJ17              	100.00%
Bootstrap support for L0PE02 as seed ortholog is 100%.
Bootstrap support for B5YJ17 as seed ortholog is 100%.

Group of orthologs #165. Best score 63 bits
Score difference with first non-orthologous sequence - P.jiroveci:63 T.yellowstonii:63

L0PG31              	100.00%		B5YIC8              	100.00%
Bootstrap support for L0PG31 as seed ortholog is 100%.
Bootstrap support for B5YIC8 as seed ortholog is 100%.

Group of orthologs #166. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 T.yellowstonii:61

L0P852              	100.00%		B5YKV0              	100.00%
Bootstrap support for L0P852 as seed ortholog is 100%.
Bootstrap support for B5YKV0 as seed ortholog is 100%.

Group of orthologs #167. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 T.yellowstonii:61

L0PF41              	100.00%		B5YK97              	100.00%
Bootstrap support for L0PF41 as seed ortholog is 100%.
Bootstrap support for B5YK97 as seed ortholog is 100%.

Group of orthologs #168. Best score 60 bits
Score difference with first non-orthologous sequence - P.jiroveci:60 T.yellowstonii:60

L0P9U9              	100.00%		B5YHY0              	100.00%
L0PFW2              	47.53%		
L0P7D9              	45.61%		
L0PFS3              	43.22%		
L0PBH4              	30.30%		
L0PCC5              	22.97%		
L0PF08              	18.18%		
L0PEA7              	12.44%		
Bootstrap support for L0P9U9 as seed ortholog is 100%.
Bootstrap support for B5YHY0 as seed ortholog is 100%.

Group of orthologs #169. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 T.yellowstonii:59

L0PD58              	100.00%		B5YJC2              	100.00%
                    	       		B5YJL6              	11.51%
Bootstrap support for L0PD58 as seed ortholog is 100%.
Bootstrap support for B5YJC2 as seed ortholog is 100%.

Group of orthologs #170. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 T.yellowstonii:59

L0PEZ2              	100.00%		B5YHV2              	100.00%
L0PH30              	100.00%		
Bootstrap support for L0PEZ2 as seed ortholog is 100%.
Bootstrap support for L0PH30 as seed ortholog is 100%.
Bootstrap support for B5YHV2 as seed ortholog is 100%.

Group of orthologs #171. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 T.yellowstonii:59

L0P910              	100.00%		B5YGI6              	100.00%
Bootstrap support for L0P910 as seed ortholog is 100%.
Bootstrap support for B5YGI6 as seed ortholog is 100%.

Group of orthologs #172. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 T.yellowstonii:59

L0P9T6              	100.00%		B5YFY8              	100.00%
Bootstrap support for L0P9T6 as seed ortholog is 100%.
Bootstrap support for B5YFY8 as seed ortholog is 100%.

Group of orthologs #173. Best score 58 bits
Score difference with first non-orthologous sequence - P.jiroveci:58 T.yellowstonii:58

L0PCA8              	100.00%		B5YG37              	100.00%
Bootstrap support for L0PCA8 as seed ortholog is 100%.
Bootstrap support for B5YG37 as seed ortholog is 100%.

Group of orthologs #174. Best score 57 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 T.yellowstonii:57

L0P8N0              	100.00%		B5YIR0              	100.00%
Bootstrap support for L0P8N0 as seed ortholog is 100%.
Bootstrap support for B5YIR0 as seed ortholog is 100%.

Group of orthologs #175. Best score 57 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 T.yellowstonii:57

L0P9P0              	100.00%		B5YKH5              	100.00%
Bootstrap support for L0P9P0 as seed ortholog is 100%.
Bootstrap support for B5YKH5 as seed ortholog is 100%.

Group of orthologs #176. Best score 57 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 T.yellowstonii:57

L0PD91              	100.00%		B5YJN4              	100.00%
Bootstrap support for L0PD91 as seed ortholog is 100%.
Bootstrap support for B5YJN4 as seed ortholog is 100%.

Group of orthologs #177. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 T.yellowstonii:56

L0P6Q8              	100.00%		B5YGB4              	100.00%
L0PD82              	100.00%		B5YHS4              	100.00%
Bootstrap support for L0P6Q8 as seed ortholog is 100%.
Bootstrap support for L0PD82 as seed ortholog is 100%.
Bootstrap support for B5YGB4 as seed ortholog is 100%.
Bootstrap support for B5YHS4 as seed ortholog is 100%.

Group of orthologs #178. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 T.yellowstonii:56

L0PBX7              	100.00%		B5YG38              	100.00%
Bootstrap support for L0PBX7 as seed ortholog is 100%.
Bootstrap support for B5YG38 as seed ortholog is 100%.

Group of orthologs #179. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 T.yellowstonii:56

L0PI13              	100.00%		B5YGY6              	100.00%
Bootstrap support for L0PI13 as seed ortholog is 100%.
Bootstrap support for B5YGY6 as seed ortholog is 100%.

Group of orthologs #180. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 T.yellowstonii:54

L0PAQ3              	100.00%		B5YFM5              	100.00%
Bootstrap support for L0PAQ3 as seed ortholog is 100%.
Bootstrap support for B5YFM5 as seed ortholog is 100%.

Group of orthologs #181. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 T.yellowstonii:54

L0PGZ5              	100.00%		B5YGH8              	100.00%
Bootstrap support for L0PGZ5 as seed ortholog is 100%.
Bootstrap support for B5YGH8 as seed ortholog is 100%.

Group of orthologs #182. Best score 52 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 T.yellowstonii:52

L0PAY5              	100.00%		B5YJX3              	100.00%
L0PCI7              	15.69%		
L0PDY0              	13.93%		
L0PC98              	13.47%		
L0PC64              	13.23%		
L0P7V6              	12.88%		
L0P853              	12.76%		
L0PBM6              	11.24%		
L0P966              	11.24%		
L0PBY8              	8.08%		
L0PEA5              	6.56%		
Bootstrap support for L0PAY5 as seed ortholog is 100%.
Bootstrap support for B5YJX3 as seed ortholog is 100%.

Group of orthologs #183. Best score 51 bits
Score difference with first non-orthologous sequence - P.jiroveci:51 T.yellowstonii:51

L0PEM1              	100.00%		B5YKZ7              	100.00%
L0P8E7              	16.87%		
L0P6W8              	15.47%		
L0PH46              	15.47%		
Bootstrap support for L0PEM1 as seed ortholog is 100%.
Bootstrap support for B5YKZ7 as seed ortholog is 100%.

Group of orthologs #184. Best score 49 bits
Score difference with first non-orthologous sequence - P.jiroveci:49 T.yellowstonii:49

L0PAH2              	100.00%		B5YIG5              	100.00%
Bootstrap support for L0PAH2 as seed ortholog is 100%.
Bootstrap support for B5YIG5 as seed ortholog is 100%.

Group of orthologs #185. Best score 48 bits
Score difference with first non-orthologous sequence - P.jiroveci:48 T.yellowstonii:48

L0PH23              	100.00%		B5YK67              	100.00%
Bootstrap support for L0PH23 as seed ortholog is 100%.
Bootstrap support for B5YK67 as seed ortholog is 100%.

Group of orthologs #186. Best score 47 bits
Score difference with first non-orthologous sequence - P.jiroveci:47 T.yellowstonii:47

L0PC85              	100.00%		B5YH35              	100.00%
                    	       		B5YIE5              	35.80%
Bootstrap support for L0PC85 as seed ortholog is 100%.
Bootstrap support for B5YH35 as seed ortholog is 100%.

Group of orthologs #187. Best score 47 bits
Score difference with first non-orthologous sequence - P.jiroveci:47 T.yellowstonii:47

L0P845              	100.00%		B5YHI2              	100.00%
Bootstrap support for L0P845 as seed ortholog is 100%.
Bootstrap support for B5YHI2 as seed ortholog is 100%.

Group of orthologs #188. Best score 47 bits
Score difference with first non-orthologous sequence - P.jiroveci:47 T.yellowstonii:47

L0P9L7              	100.00%		B5YKY4              	100.00%
Bootstrap support for L0P9L7 as seed ortholog is 100%.
Bootstrap support for B5YKY4 as seed ortholog is 100%.

Group of orthologs #189. Best score 46 bits
Score difference with first non-orthologous sequence - P.jiroveci:46 T.yellowstonii:46

L0PB66              	100.00%		B5YG33              	100.00%
Bootstrap support for L0PB66 as seed ortholog is 100%.
Bootstrap support for B5YG33 as seed ortholog is 100%.

Group of orthologs #190. Best score 45 bits
Score difference with first non-orthologous sequence - P.jiroveci:45 T.yellowstonii:45

L0PC89              	100.00%		B5YI02              	100.00%
Bootstrap support for L0PC89 as seed ortholog is 100%.
Bootstrap support for B5YI02 as seed ortholog is 100%.

Group of orthologs #191. Best score 43 bits
Score difference with first non-orthologous sequence - P.jiroveci:43 T.yellowstonii:43

L0P799              	100.00%		B5YG58              	100.00%
Bootstrap support for L0P799 as seed ortholog is 100%.
Bootstrap support for B5YG58 as seed ortholog is 100%.

Group of orthologs #192. Best score 42 bits
Score difference with first non-orthologous sequence - P.jiroveci:42 T.yellowstonii:42

L0PAT8              	100.00%		B5YHC8              	100.00%
L0PEV0              	5.94%		
Bootstrap support for L0PAT8 as seed ortholog is 100%.
Bootstrap support for B5YHC8 as seed ortholog is 100%.