###################################
1456 groups of orthologs
1541 in-paralogs from P.jiroveci
2056 in-paralogs from T.nigroviridis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3405 bits
Score difference with first non-orthologous sequence - P.jiroveci:3405 T.nigroviridis:3405

L0PCQ0              	100.00%		H3CCS4              	100.00%
Bootstrap support for L0PCQ0 as seed ortholog is 100%.
Bootstrap support for H3CCS4 as seed ortholog is 100%.

Group of orthologs #2. Best score 2894 bits
Score difference with first non-orthologous sequence - P.jiroveci:2894 T.nigroviridis:1711

L0PGR1              	100.00%		H3DIP7              	100.00%
Bootstrap support for L0PGR1 as seed ortholog is 100%.
Bootstrap support for H3DIP7 as seed ortholog is 100%.

Group of orthologs #3. Best score 1868 bits
Score difference with first non-orthologous sequence - P.jiroveci:1868 T.nigroviridis:1868

L0PB90              	100.00%		H3CXP9              	100.00%
Bootstrap support for L0PB90 as seed ortholog is 100%.
Bootstrap support for H3CXP9 as seed ortholog is 100%.

Group of orthologs #4. Best score 1847 bits
Score difference with first non-orthologous sequence - P.jiroveci:1847 T.nigroviridis:1847

L0PGI2              	100.00%		H3CZJ8              	100.00%
                    	       		H3C4M0              	57.88%
Bootstrap support for L0PGI2 as seed ortholog is 100%.
Bootstrap support for H3CZJ8 as seed ortholog is 100%.

Group of orthologs #5. Best score 1837 bits
Score difference with first non-orthologous sequence - P.jiroveci:1837 T.nigroviridis:1095

L0PBF5              	100.00%		H3DD68              	100.00%
                    	       		H3D2E7              	72.13%
Bootstrap support for L0PBF5 as seed ortholog is 100%.
Bootstrap support for H3DD68 as seed ortholog is 100%.

Group of orthologs #6. Best score 1824 bits
Score difference with first non-orthologous sequence - P.jiroveci:1824 T.nigroviridis:1824

L0PHB1              	100.00%		H3CFC6              	100.00%
Bootstrap support for L0PHB1 as seed ortholog is 100%.
Bootstrap support for H3CFC6 as seed ortholog is 100%.

Group of orthologs #7. Best score 1816 bits
Score difference with first non-orthologous sequence - P.jiroveci:1816 T.nigroviridis:1816

L0P7C3              	100.00%		H3CIP0              	100.00%
Bootstrap support for L0P7C3 as seed ortholog is 100%.
Bootstrap support for H3CIP0 as seed ortholog is 100%.

Group of orthologs #8. Best score 1781 bits
Score difference with first non-orthologous sequence - P.jiroveci:1781 T.nigroviridis:1781

L0PEL4              	100.00%		H3CL41              	100.00%
Bootstrap support for L0PEL4 as seed ortholog is 100%.
Bootstrap support for H3CL41 as seed ortholog is 100%.

Group of orthologs #9. Best score 1634 bits
Score difference with first non-orthologous sequence - P.jiroveci:1634 T.nigroviridis:1634

L0PGJ4              	100.00%		H3DEN8              	100.00%
Bootstrap support for L0PGJ4 as seed ortholog is 100%.
Bootstrap support for H3DEN8 as seed ortholog is 100%.

Group of orthologs #10. Best score 1359 bits
Score difference with first non-orthologous sequence - P.jiroveci:1359 T.nigroviridis:624

L0PG77              	100.00%		H3C732              	100.00%
Bootstrap support for L0PG77 as seed ortholog is 100%.
Bootstrap support for H3C732 as seed ortholog is 100%.

Group of orthologs #11. Best score 1341 bits
Score difference with first non-orthologous sequence - P.jiroveci:1341 T.nigroviridis:1341

L0PD06              	100.00%		H3CHL6              	100.00%
Bootstrap support for L0PD06 as seed ortholog is 100%.
Bootstrap support for H3CHL6 as seed ortholog is 100%.

Group of orthologs #12. Best score 1313 bits
Score difference with first non-orthologous sequence - P.jiroveci:1313 T.nigroviridis:1313

L0PB43              	100.00%		H3D6J3              	100.00%
Bootstrap support for L0PB43 as seed ortholog is 100%.
Bootstrap support for H3D6J3 as seed ortholog is 100%.

Group of orthologs #13. Best score 1200 bits
Score difference with first non-orthologous sequence - P.jiroveci:1200 T.nigroviridis:1200

L0P818              	100.00%		H3DLE0              	100.00%
                    	       		H3C592              	37.71%
Bootstrap support for L0P818 as seed ortholog is 100%.
Bootstrap support for H3DLE0 as seed ortholog is 100%.

Group of orthologs #14. Best score 1182 bits
Score difference with first non-orthologous sequence - P.jiroveci:1182 T.nigroviridis:1120

L0PFU4              	100.00%		H3CCH5              	100.00%
Bootstrap support for L0PFU4 as seed ortholog is 100%.
Bootstrap support for H3CCH5 as seed ortholog is 100%.

Group of orthologs #15. Best score 1166 bits
Score difference with first non-orthologous sequence - P.jiroveci:1166 T.nigroviridis:1166

L0PCG8              	100.00%		H3CGY9              	100.00%
Bootstrap support for L0PCG8 as seed ortholog is 100%.
Bootstrap support for H3CGY9 as seed ortholog is 100%.

Group of orthologs #16. Best score 1164 bits
Score difference with first non-orthologous sequence - P.jiroveci:1164 T.nigroviridis:1164

L0P928              	100.00%		H3D0H5              	100.00%
                    	       		H3C3S9              	74.91%
Bootstrap support for L0P928 as seed ortholog is 100%.
Bootstrap support for H3D0H5 as seed ortholog is 100%.

Group of orthologs #17. Best score 1163 bits
Score difference with first non-orthologous sequence - P.jiroveci:1163 T.nigroviridis:1163

L0PBY6              	100.00%		H3CQM3              	100.00%
Bootstrap support for L0PBY6 as seed ortholog is 100%.
Bootstrap support for H3CQM3 as seed ortholog is 100%.

Group of orthologs #18. Best score 1138 bits
Score difference with first non-orthologous sequence - P.jiroveci:1138 T.nigroviridis:1138

L0PDK3              	100.00%		H3D242              	100.00%
Bootstrap support for L0PDK3 as seed ortholog is 100%.
Bootstrap support for H3D242 as seed ortholog is 100%.

Group of orthologs #19. Best score 1096 bits
Score difference with first non-orthologous sequence - P.jiroveci:579 T.nigroviridis:665

L0PB13              	100.00%		H3C767              	100.00%
Bootstrap support for L0PB13 as seed ortholog is 100%.
Bootstrap support for H3C767 as seed ortholog is 100%.

Group of orthologs #20. Best score 1086 bits
Score difference with first non-orthologous sequence - P.jiroveci:1086 T.nigroviridis:797

L0PBE4              	100.00%		H3CIF0              	100.00%
Bootstrap support for L0PBE4 as seed ortholog is 100%.
Bootstrap support for H3CIF0 as seed ortholog is 100%.

Group of orthologs #21. Best score 1069 bits
Score difference with first non-orthologous sequence - P.jiroveci:1069 T.nigroviridis:316

L0PCK0              	100.00%		H3DC26              	100.00%
L0P7U1              	99.05%		
Bootstrap support for L0PCK0 as seed ortholog is 100%.
Bootstrap support for H3DC26 as seed ortholog is 100%.

Group of orthologs #22. Best score 1056 bits
Score difference with first non-orthologous sequence - P.jiroveci:1056 T.nigroviridis:683

L0PG21              	100.00%		H3DK21              	100.00%
Bootstrap support for L0PG21 as seed ortholog is 100%.
Bootstrap support for H3DK21 as seed ortholog is 100%.

Group of orthologs #23. Best score 1020 bits
Score difference with first non-orthologous sequence - P.jiroveci:1020 T.nigroviridis:1020

L0P7P6              	100.00%		H3DDQ2              	100.00%
Bootstrap support for L0P7P6 as seed ortholog is 100%.
Bootstrap support for H3DDQ2 as seed ortholog is 100%.

Group of orthologs #24. Best score 1014 bits
Score difference with first non-orthologous sequence - P.jiroveci:443 T.nigroviridis:552

L0PAJ7              	100.00%		H3D255              	100.00%
Bootstrap support for L0PAJ7 as seed ortholog is 100%.
Bootstrap support for H3D255 as seed ortholog is 100%.

Group of orthologs #25. Best score 1002 bits
Score difference with first non-orthologous sequence - P.jiroveci:393 T.nigroviridis:242

L0PDB3              	100.00%		H3CRE9              	100.00%
Bootstrap support for L0PDB3 as seed ortholog is 100%.
Bootstrap support for H3CRE9 as seed ortholog is 99%.

Group of orthologs #26. Best score 974 bits
Score difference with first non-orthologous sequence - P.jiroveci:974 T.nigroviridis:974

L0P7R6              	100.00%		H3DJF3              	100.00%
L0PHF8              	80.60%		
Bootstrap support for L0P7R6 as seed ortholog is 100%.
Bootstrap support for H3DJF3 as seed ortholog is 100%.

Group of orthologs #27. Best score 972 bits
Score difference with first non-orthologous sequence - P.jiroveci:972 T.nigroviridis:972

L0P9F0              	100.00%		H3CEF8              	100.00%
Bootstrap support for L0P9F0 as seed ortholog is 100%.
Bootstrap support for H3CEF8 as seed ortholog is 100%.

Group of orthologs #28. Best score 966 bits
Score difference with first non-orthologous sequence - P.jiroveci:966 T.nigroviridis:228

L0PDI4              	100.00%		H3D9D5              	100.00%
                    	       		H3BYF2              	49.23%
                    	       		H3CRL6              	45.64%
                    	       		H3CFB7              	35.43%
                    	       		H3C1R4              	13.27%
                    	       		H3CE06              	12.81%
                    	       		H3BXZ2              	12.28%
                    	       		H3DB40              	12.10%
                    	       		H3CMS1              	11.93%
                    	       		H3DR28              	11.75%
                    	       		H3CIZ3              	9.78%
Bootstrap support for L0PDI4 as seed ortholog is 100%.
Bootstrap support for H3D9D5 as seed ortholog is 96%.

Group of orthologs #29. Best score 965 bits
Score difference with first non-orthologous sequence - P.jiroveci:965 T.nigroviridis:786

L0PFN4              	100.00%		H3D5X8              	100.00%
Bootstrap support for L0PFN4 as seed ortholog is 100%.
Bootstrap support for H3D5X8 as seed ortholog is 100%.

Group of orthologs #30. Best score 963 bits
Score difference with first non-orthologous sequence - P.jiroveci:751 T.nigroviridis:706

L0PEK6              	100.00%		Q4SL93              	100.00%
                    	       		H3DM99              	66.05%
                    	       		H3CF85              	33.33%
Bootstrap support for L0PEK6 as seed ortholog is 100%.
Bootstrap support for Q4SL93 as seed ortholog is 100%.

Group of orthologs #31. Best score 951 bits
Score difference with first non-orthologous sequence - P.jiroveci:951 T.nigroviridis:568

L0P9P7              	100.00%		H3CAK8              	100.00%
Bootstrap support for L0P9P7 as seed ortholog is 100%.
Bootstrap support for H3CAK8 as seed ortholog is 100%.

Group of orthologs #32. Best score 945 bits
Score difference with first non-orthologous sequence - P.jiroveci:883 T.nigroviridis:220

L0PG61              	100.00%		H3DE69              	100.00%
                    	       		H3D5A4              	19.77%
Bootstrap support for L0PG61 as seed ortholog is 100%.
Bootstrap support for H3DE69 as seed ortholog is 99%.

Group of orthologs #33. Best score 944 bits
Score difference with first non-orthologous sequence - P.jiroveci:882 T.nigroviridis:536

L0PAG9              	100.00%		H3D4J3              	100.00%
Bootstrap support for L0PAG9 as seed ortholog is 100%.
Bootstrap support for H3D4J3 as seed ortholog is 100%.

Group of orthologs #34. Best score 935 bits
Score difference with first non-orthologous sequence - P.jiroveci:350 T.nigroviridis:935

L0P8X7              	100.00%		H3CAR0              	100.00%
Bootstrap support for L0P8X7 as seed ortholog is 100%.
Bootstrap support for H3CAR0 as seed ortholog is 100%.

Group of orthologs #35. Best score 914 bits
Score difference with first non-orthologous sequence - P.jiroveci:372 T.nigroviridis:434

L0PFC8              	100.00%		H3D496              	100.00%
Bootstrap support for L0PFC8 as seed ortholog is 100%.
Bootstrap support for H3D496 as seed ortholog is 100%.

Group of orthologs #36. Best score 913 bits
Score difference with first non-orthologous sequence - P.jiroveci:913 T.nigroviridis:913

L0P7V0              	100.00%		H3D0I6              	100.00%
Bootstrap support for L0P7V0 as seed ortholog is 100%.
Bootstrap support for H3D0I6 as seed ortholog is 100%.

Group of orthologs #37. Best score 894 bits
Score difference with first non-orthologous sequence - P.jiroveci:894 T.nigroviridis:286

L0PAW9              	100.00%		H3D3U9              	100.00%
L0PBZ0              	70.66%		H3D069              	48.57%
Bootstrap support for L0PAW9 as seed ortholog is 100%.
Bootstrap support for H3D3U9 as seed ortholog is 100%.

Group of orthologs #38. Best score 875 bits
Score difference with first non-orthologous sequence - P.jiroveci:581 T.nigroviridis:531

L0PCW9              	100.00%		H3BZQ0              	100.00%
                    	       		H3D1K5              	63.86%
                    	       		H3D1Z8              	63.59%
Bootstrap support for L0PCW9 as seed ortholog is 100%.
Bootstrap support for H3BZQ0 as seed ortholog is 100%.

Group of orthologs #39. Best score 875 bits
Score difference with first non-orthologous sequence - P.jiroveci:875 T.nigroviridis:875

L0PG12              	100.00%		H3DLB9              	100.00%
Bootstrap support for L0PG12 as seed ortholog is 100%.
Bootstrap support for H3DLB9 as seed ortholog is 100%.

Group of orthologs #40. Best score 869 bits
Score difference with first non-orthologous sequence - P.jiroveci:869 T.nigroviridis:869

L0P9H4              	100.00%		H3DP28              	100.00%
Bootstrap support for L0P9H4 as seed ortholog is 100%.
Bootstrap support for H3DP28 as seed ortholog is 100%.

Group of orthologs #41. Best score 852 bits
Score difference with first non-orthologous sequence - P.jiroveci:852 T.nigroviridis:852

L0PEU6              	100.00%		H3BWW0              	100.00%
                    	       		H3CH50              	56.43%
Bootstrap support for L0PEU6 as seed ortholog is 100%.
Bootstrap support for H3BWW0 as seed ortholog is 100%.

Group of orthologs #42. Best score 848 bits
Score difference with first non-orthologous sequence - P.jiroveci:848 T.nigroviridis:769

L0P915              	100.00%		H3DLI2              	100.00%
Bootstrap support for L0P915 as seed ortholog is 100%.
Bootstrap support for H3DLI2 as seed ortholog is 100%.

Group of orthologs #43. Best score 844 bits
Score difference with first non-orthologous sequence - P.jiroveci:844 T.nigroviridis:638

L0PD55              	100.00%		H3DNR9              	100.00%
Bootstrap support for L0PD55 as seed ortholog is 100%.
Bootstrap support for H3DNR9 as seed ortholog is 100%.

Group of orthologs #44. Best score 843 bits
Score difference with first non-orthologous sequence - P.jiroveci:843 T.nigroviridis:762

L0PDF1              	100.00%		H3CGA4              	100.00%
Bootstrap support for L0PDF1 as seed ortholog is 100%.
Bootstrap support for H3CGA4 as seed ortholog is 100%.

Group of orthologs #45. Best score 842 bits
Score difference with first non-orthologous sequence - P.jiroveci:647 T.nigroviridis:590

L0PFV0              	100.00%		H3DN28              	100.00%
Bootstrap support for L0PFV0 as seed ortholog is 100%.
Bootstrap support for H3DN28 as seed ortholog is 100%.

Group of orthologs #46. Best score 831 bits
Score difference with first non-orthologous sequence - P.jiroveci:831 T.nigroviridis:263

L0PFQ2              	100.00%		H3CJZ9              	100.00%
L0PGR4              	91.86%		H3CTB5              	55.13%
Bootstrap support for L0PFQ2 as seed ortholog is 100%.
Bootstrap support for H3CJZ9 as seed ortholog is 99%.

Group of orthologs #47. Best score 826 bits
Score difference with first non-orthologous sequence - P.jiroveci:826 T.nigroviridis:826

L0PC43              	100.00%		H3D1L7              	100.00%
L0PCW3              	45.06%		
Bootstrap support for L0PC43 as seed ortholog is 100%.
Bootstrap support for H3D1L7 as seed ortholog is 100%.

Group of orthologs #48. Best score 826 bits
Score difference with first non-orthologous sequence - P.jiroveci:826 T.nigroviridis:826

L0PCC4              	100.00%		H3DDP5              	100.00%
Bootstrap support for L0PCC4 as seed ortholog is 100%.
Bootstrap support for H3DDP5 as seed ortholog is 100%.

Group of orthologs #49. Best score 821 bits
Score difference with first non-orthologous sequence - P.jiroveci:316 T.nigroviridis:339

L0PB83              	100.00%		H3CXJ7              	100.00%
Bootstrap support for L0PB83 as seed ortholog is 100%.
Bootstrap support for H3CXJ7 as seed ortholog is 99%.

Group of orthologs #50. Best score 819 bits
Score difference with first non-orthologous sequence - P.jiroveci:819 T.nigroviridis:819

L0PFF9              	100.00%		H3DPB7              	100.00%
Bootstrap support for L0PFF9 as seed ortholog is 100%.
Bootstrap support for H3DPB7 as seed ortholog is 100%.

Group of orthologs #51. Best score 810 bits
Score difference with first non-orthologous sequence - P.jiroveci:713 T.nigroviridis:592

L0PC93              	100.00%		H3CZ11              	100.00%
Bootstrap support for L0PC93 as seed ortholog is 100%.
Bootstrap support for H3CZ11 as seed ortholog is 100%.

Group of orthologs #52. Best score 808 bits
Score difference with first non-orthologous sequence - P.jiroveci:808 T.nigroviridis:808

L0PH89              	100.00%		H3CXD7              	100.00%
Bootstrap support for L0PH89 as seed ortholog is 100%.
Bootstrap support for H3CXD7 as seed ortholog is 100%.

Group of orthologs #53. Best score 799 bits
Score difference with first non-orthologous sequence - P.jiroveci:799 T.nigroviridis:799

L0PE96              	100.00%		H3DIN0              	100.00%
Bootstrap support for L0PE96 as seed ortholog is 100%.
Bootstrap support for H3DIN0 as seed ortholog is 100%.

Group of orthologs #54. Best score 796 bits
Score difference with first non-orthologous sequence - P.jiroveci:796 T.nigroviridis:454

L0PEL5              	100.00%		H3CG08              	100.00%
L0PGC2              	49.10%		H3DD16              	44.81%
Bootstrap support for L0PEL5 as seed ortholog is 100%.
Bootstrap support for H3CG08 as seed ortholog is 100%.

Group of orthologs #55. Best score 794 bits
Score difference with first non-orthologous sequence - P.jiroveci:794 T.nigroviridis:794

L0PC54              	100.00%		H3DF39              	100.00%
Bootstrap support for L0PC54 as seed ortholog is 100%.
Bootstrap support for H3DF39 as seed ortholog is 100%.

Group of orthologs #56. Best score 792 bits
Score difference with first non-orthologous sequence - P.jiroveci:792 T.nigroviridis:792

L0P9W2              	100.00%		H3DMY7              	100.00%
Bootstrap support for L0P9W2 as seed ortholog is 100%.
Bootstrap support for H3DMY7 as seed ortholog is 100%.

Group of orthologs #57. Best score 780 bits
Score difference with first non-orthologous sequence - P.jiroveci:780 T.nigroviridis:707

L0P7V1              	100.00%		H3CZE3              	100.00%
Bootstrap support for L0P7V1 as seed ortholog is 100%.
Bootstrap support for H3CZE3 as seed ortholog is 100%.

Group of orthologs #58. Best score 779 bits
Score difference with first non-orthologous sequence - P.jiroveci:779 T.nigroviridis:133

L0PBA5              	100.00%		H3CWS6              	100.00%
                    	       		H3CA99              	47.68%
                    	       		H3CAA0              	25.83%
                    	       		H3CA98              	7.28%
Bootstrap support for L0PBA5 as seed ortholog is 100%.
Bootstrap support for H3CWS6 as seed ortholog is 99%.

Group of orthologs #59. Best score 779 bits
Score difference with first non-orthologous sequence - P.jiroveci:779 T.nigroviridis:779

L0PAV3              	100.00%		H3CMB6              	100.00%
                    	       		H3CMQ4              	9.23%
Bootstrap support for L0PAV3 as seed ortholog is 100%.
Bootstrap support for H3CMB6 as seed ortholog is 100%.

Group of orthologs #60. Best score 775 bits
Score difference with first non-orthologous sequence - P.jiroveci:775 T.nigroviridis:775

L0P9R9              	100.00%		H3CVG4              	100.00%
Bootstrap support for L0P9R9 as seed ortholog is 100%.
Bootstrap support for H3CVG4 as seed ortholog is 100%.

Group of orthologs #61. Best score 767 bits
Score difference with first non-orthologous sequence - P.jiroveci:767 T.nigroviridis:767

L0PBD7              	100.00%		H3D987              	100.00%
                    	       		H3CPV8              	25.18%
Bootstrap support for L0PBD7 as seed ortholog is 100%.
Bootstrap support for H3D987 as seed ortholog is 100%.

Group of orthologs #62. Best score 765 bits
Score difference with first non-orthologous sequence - P.jiroveci:765 T.nigroviridis:765

L0PDQ4              	100.00%		H3CEF1              	100.00%
Bootstrap support for L0PDQ4 as seed ortholog is 100%.
Bootstrap support for H3CEF1 as seed ortholog is 100%.

Group of orthologs #63. Best score 765 bits
Score difference with first non-orthologous sequence - P.jiroveci:765 T.nigroviridis:458

L0PBL6              	100.00%		H3CQJ0              	100.00%
Bootstrap support for L0PBL6 as seed ortholog is 100%.
Bootstrap support for H3CQJ0 as seed ortholog is 100%.

Group of orthologs #64. Best score 764 bits
Score difference with first non-orthologous sequence - P.jiroveci:764 T.nigroviridis:764

L0P7X5              	100.00%		H3CIS0              	100.00%
Bootstrap support for L0P7X5 as seed ortholog is 100%.
Bootstrap support for H3CIS0 as seed ortholog is 100%.

Group of orthologs #65. Best score 755 bits
Score difference with first non-orthologous sequence - P.jiroveci:755 T.nigroviridis:755

L0PAN4              	100.00%		H3DKI6              	100.00%
Bootstrap support for L0PAN4 as seed ortholog is 100%.
Bootstrap support for H3DKI6 as seed ortholog is 100%.

Group of orthologs #66. Best score 750 bits
Score difference with first non-orthologous sequence - P.jiroveci:419 T.nigroviridis:750

L0PA62              	100.00%		H3DJD9              	100.00%
Bootstrap support for L0PA62 as seed ortholog is 100%.
Bootstrap support for H3DJD9 as seed ortholog is 100%.

Group of orthologs #67. Best score 743 bits
Score difference with first non-orthologous sequence - P.jiroveci:743 T.nigroviridis:283

L0PGU1              	100.00%		H3C683              	100.00%
                    	       		H3D867              	33.33%
                    	       		H3CXZ7              	25.79%
                    	       		H3CZ56              	16.22%
                    	       		H3BWA2              	12.40%
Bootstrap support for L0PGU1 as seed ortholog is 100%.
Bootstrap support for H3C683 as seed ortholog is 100%.

Group of orthologs #68. Best score 743 bits
Score difference with first non-orthologous sequence - P.jiroveci:285 T.nigroviridis:743

L0P833              	100.00%		H3DH01              	100.00%
Bootstrap support for L0P833 as seed ortholog is 100%.
Bootstrap support for H3DH01 as seed ortholog is 100%.

Group of orthologs #69. Best score 742 bits
Score difference with first non-orthologous sequence - P.jiroveci:391 T.nigroviridis:227

L0P9U5              	100.00%		H3DEV3              	100.00%
                    	       		H3D2Z9              	43.74%
Bootstrap support for L0P9U5 as seed ortholog is 100%.
Bootstrap support for H3DEV3 as seed ortholog is 99%.

Group of orthologs #70. Best score 739 bits
Score difference with first non-orthologous sequence - P.jiroveci:739 T.nigroviridis:181

L0PBR4              	100.00%		Q4SNG9              	100.00%
                    	       		H3DCL1              	69.82%
                    	       		H3D7M1              	49.70%
                    	       		H3CNL4              	19.53%
                    	       		H3C7Y6              	14.20%
Bootstrap support for L0PBR4 as seed ortholog is 100%.
Bootstrap support for Q4SNG9 as seed ortholog is 100%.

Group of orthologs #71. Best score 738 bits
Score difference with first non-orthologous sequence - P.jiroveci:738 T.nigroviridis:154

L0PEW0              	100.00%		H3C385              	100.00%
Bootstrap support for L0PEW0 as seed ortholog is 100%.
Bootstrap support for H3C385 as seed ortholog is 99%.

Group of orthologs #72. Best score 737 bits
Score difference with first non-orthologous sequence - P.jiroveci:737 T.nigroviridis:678

L0PBF3              	100.00%		H3CZ41              	100.00%
Bootstrap support for L0PBF3 as seed ortholog is 100%.
Bootstrap support for H3CZ41 as seed ortholog is 100%.

Group of orthologs #73. Best score 733 bits
Score difference with first non-orthologous sequence - P.jiroveci:632 T.nigroviridis:85

L0PAC9              	100.00%		H3CU53              	100.00%
                    	       		H3CHX8              	21.15%
                    	       		H3CMY1              	15.42%
Bootstrap support for L0PAC9 as seed ortholog is 100%.
Bootstrap support for H3CU53 as seed ortholog is 89%.

Group of orthologs #74. Best score 731 bits
Score difference with first non-orthologous sequence - P.jiroveci:731 T.nigroviridis:731

L0PBP8              	100.00%		H3CQL2              	100.00%
Bootstrap support for L0PBP8 as seed ortholog is 100%.
Bootstrap support for H3CQL2 as seed ortholog is 100%.

Group of orthologs #75. Best score 723 bits
Score difference with first non-orthologous sequence - P.jiroveci:723 T.nigroviridis:723

L0PG27              	100.00%		H3CRV0              	100.00%
Bootstrap support for L0PG27 as seed ortholog is 100%.
Bootstrap support for H3CRV0 as seed ortholog is 100%.

Group of orthologs #76. Best score 723 bits
Score difference with first non-orthologous sequence - P.jiroveci:723 T.nigroviridis:503

L0PGA5              	100.00%		Q4SMY2              	100.00%
Bootstrap support for L0PGA5 as seed ortholog is 100%.
Bootstrap support for Q4SMY2 as seed ortholog is 100%.

Group of orthologs #77. Best score 722 bits
Score difference with first non-orthologous sequence - P.jiroveci:722 T.nigroviridis:722

L0PFJ0              	100.00%		H3CLW3              	100.00%
                    	       		H3D8I3              	63.12%
Bootstrap support for L0PFJ0 as seed ortholog is 100%.
Bootstrap support for H3CLW3 as seed ortholog is 100%.

Group of orthologs #78. Best score 722 bits
Score difference with first non-orthologous sequence - P.jiroveci:306 T.nigroviridis:220

L0PB85              	100.00%		H3CZJ4              	100.00%
                    	       		H3CNR9              	30.35%
Bootstrap support for L0PB85 as seed ortholog is 99%.
Bootstrap support for H3CZJ4 as seed ortholog is 99%.

Group of orthologs #79. Best score 722 bits
Score difference with first non-orthologous sequence - P.jiroveci:722 T.nigroviridis:722

L0PF68              	100.00%		H3CCM2              	100.00%
Bootstrap support for L0PF68 as seed ortholog is 100%.
Bootstrap support for H3CCM2 as seed ortholog is 100%.

Group of orthologs #80. Best score 722 bits
Score difference with first non-orthologous sequence - P.jiroveci:642 T.nigroviridis:722

L0PA93              	100.00%		H3CRB7              	100.00%
Bootstrap support for L0PA93 as seed ortholog is 100%.
Bootstrap support for H3CRB7 as seed ortholog is 100%.

Group of orthologs #81. Best score 720 bits
Score difference with first non-orthologous sequence - P.jiroveci:720 T.nigroviridis:720

L0PAS8              	100.00%		H3CYS8              	100.00%
                    	       		H3CBE4              	31.96%
Bootstrap support for L0PAS8 as seed ortholog is 100%.
Bootstrap support for H3CYS8 as seed ortholog is 100%.

Group of orthologs #82. Best score 717 bits
Score difference with first non-orthologous sequence - P.jiroveci:717 T.nigroviridis:717

L0PAQ3              	100.00%		H3DPT3              	100.00%
                    	       		H3D766              	64.95%
                    	       		Q4SFP9              	64.26%
Bootstrap support for L0PAQ3 as seed ortholog is 100%.
Bootstrap support for H3DPT3 as seed ortholog is 100%.

Group of orthologs #83. Best score 711 bits
Score difference with first non-orthologous sequence - P.jiroveci:711 T.nigroviridis:346

L0PC37              	100.00%		H3DI20              	100.00%
Bootstrap support for L0PC37 as seed ortholog is 100%.
Bootstrap support for H3DI20 as seed ortholog is 100%.

Group of orthologs #84. Best score 709 bits
Score difference with first non-orthologous sequence - P.jiroveci:395 T.nigroviridis:468

L0PBV5              	100.00%		H3DPC1              	100.00%
Bootstrap support for L0PBV5 as seed ortholog is 100%.
Bootstrap support for H3DPC1 as seed ortholog is 100%.

Group of orthologs #85. Best score 706 bits
Score difference with first non-orthologous sequence - P.jiroveci:507 T.nigroviridis:487

L0PGL8              	100.00%		H3BZA5              	100.00%
Bootstrap support for L0PGL8 as seed ortholog is 100%.
Bootstrap support for H3BZA5 as seed ortholog is 100%.

Group of orthologs #86. Best score 706 bits
Score difference with first non-orthologous sequence - P.jiroveci:706 T.nigroviridis:441

L0PBW7              	100.00%		H3DNZ6              	100.00%
Bootstrap support for L0PBW7 as seed ortholog is 100%.
Bootstrap support for H3DNZ6 as seed ortholog is 100%.

Group of orthologs #87. Best score 699 bits
Score difference with first non-orthologous sequence - P.jiroveci:699 T.nigroviridis:699

L0PE57              	100.00%		H3CSA4              	100.00%
Bootstrap support for L0PE57 as seed ortholog is 100%.
Bootstrap support for H3CSA4 as seed ortholog is 100%.

Group of orthologs #88. Best score 697 bits
Score difference with first non-orthologous sequence - P.jiroveci:697 T.nigroviridis:697

L0PDF3              	100.00%		H3D241              	100.00%
                    	       		H3CP60              	48.45%
Bootstrap support for L0PDF3 as seed ortholog is 100%.
Bootstrap support for H3D241 as seed ortholog is 100%.

Group of orthologs #89. Best score 697 bits
Score difference with first non-orthologous sequence - P.jiroveci:697 T.nigroviridis:697

L0PDK6              	100.00%		H3CDG6              	100.00%
Bootstrap support for L0PDK6 as seed ortholog is 100%.
Bootstrap support for H3CDG6 as seed ortholog is 100%.

Group of orthologs #90. Best score 695 bits
Score difference with first non-orthologous sequence - P.jiroveci:407 T.nigroviridis:437

L0P7L0              	100.00%		H3DF97              	100.00%
L0PCI7              	40.08%		
Bootstrap support for L0P7L0 as seed ortholog is 100%.
Bootstrap support for H3DF97 as seed ortholog is 100%.

Group of orthologs #91. Best score 685 bits
Score difference with first non-orthologous sequence - P.jiroveci:596 T.nigroviridis:116

L0PA91              	100.00%		H3CNG9              	100.00%
                    	       		H3CS65              	93.33%
                    	       		H3DNG2              	86.67%
                    	       		Q4S744              	50.67%
                    	       		H3DJZ1              	46.67%
                    	       		H3DJ96              	41.33%
Bootstrap support for L0PA91 as seed ortholog is 100%.
Bootstrap support for H3CNG9 as seed ortholog is 100%.

Group of orthologs #92. Best score 685 bits
Score difference with first non-orthologous sequence - P.jiroveci:685 T.nigroviridis:473

L0PG45              	100.00%		H3D8I7              	100.00%
Bootstrap support for L0PG45 as seed ortholog is 100%.
Bootstrap support for H3D8I7 as seed ortholog is 100%.

Group of orthologs #93. Best score 683 bits
Score difference with first non-orthologous sequence - P.jiroveci:683 T.nigroviridis:466

L0P945              	100.00%		H3D420              	100.00%
Bootstrap support for L0P945 as seed ortholog is 100%.
Bootstrap support for H3D420 as seed ortholog is 100%.

Group of orthologs #94. Best score 676 bits
Score difference with first non-orthologous sequence - P.jiroveci:676 T.nigroviridis:676

L0P710              	100.00%		H3C9G4              	100.00%
Bootstrap support for L0P710 as seed ortholog is 100%.
Bootstrap support for H3C9G4 as seed ortholog is 100%.

Group of orthologs #95. Best score 675 bits
Score difference with first non-orthologous sequence - P.jiroveci:567 T.nigroviridis:563

L0PIF0              	100.00%		H3DDP8              	100.00%
                    	       		H3CQX4              	46.12%
                    	       		H3CZY4              	5.17%
Bootstrap support for L0PIF0 as seed ortholog is 100%.
Bootstrap support for H3DDP8 as seed ortholog is 100%.

Group of orthologs #96. Best score 674 bits
Score difference with first non-orthologous sequence - P.jiroveci:674 T.nigroviridis:674

L0P8L6              	100.00%		H3D3N6              	100.00%
Bootstrap support for L0P8L6 as seed ortholog is 100%.
Bootstrap support for H3D3N6 as seed ortholog is 100%.

Group of orthologs #97. Best score 673 bits
Score difference with first non-orthologous sequence - P.jiroveci:673 T.nigroviridis:673

L0PB98              	100.00%		H3CL36              	100.00%
Bootstrap support for L0PB98 as seed ortholog is 100%.
Bootstrap support for H3CL36 as seed ortholog is 100%.

Group of orthologs #98. Best score 672 bits
Score difference with first non-orthologous sequence - P.jiroveci:672 T.nigroviridis:672

L0PCR2              	100.00%		H3CG64              	100.00%
Bootstrap support for L0PCR2 as seed ortholog is 100%.
Bootstrap support for H3CG64 as seed ortholog is 100%.

Group of orthologs #99. Best score 667 bits
Score difference with first non-orthologous sequence - P.jiroveci:667 T.nigroviridis:667

L0PC79              	100.00%		H3DQ98              	100.00%
                    	       		Q4RSZ3              	24.69%
                    	       		H3CUN1              	21.82%
                    	       		H3D9P0              	15.98%
Bootstrap support for L0PC79 as seed ortholog is 100%.
Bootstrap support for H3DQ98 as seed ortholog is 100%.

Group of orthologs #100. Best score 665 bits
Score difference with first non-orthologous sequence - P.jiroveci:665 T.nigroviridis:665

L0PBY5              	100.00%		H3D8Z1              	100.00%
                    	       		H3C6T3              	37.53%
Bootstrap support for L0PBY5 as seed ortholog is 100%.
Bootstrap support for H3D8Z1 as seed ortholog is 100%.

Group of orthologs #101. Best score 665 bits
Score difference with first non-orthologous sequence - P.jiroveci:665 T.nigroviridis:489

L0PER6              	100.00%		H3CB14              	100.00%
Bootstrap support for L0PER6 as seed ortholog is 100%.
Bootstrap support for H3CB14 as seed ortholog is 100%.

Group of orthologs #102. Best score 665 bits
Score difference with first non-orthologous sequence - P.jiroveci:444 T.nigroviridis:397

L0PE26              	100.00%		H3CGJ1              	100.00%
Bootstrap support for L0PE26 as seed ortholog is 100%.
Bootstrap support for H3CGJ1 as seed ortholog is 100%.

Group of orthologs #103. Best score 665 bits
Score difference with first non-orthologous sequence - P.jiroveci:361 T.nigroviridis:665

L0PFG7              	100.00%		H3CVD5              	100.00%
Bootstrap support for L0PFG7 as seed ortholog is 100%.
Bootstrap support for H3CVD5 as seed ortholog is 100%.

Group of orthologs #104. Best score 664 bits
Score difference with first non-orthologous sequence - P.jiroveci:664 T.nigroviridis:664

L0P8M6              	100.00%		H3DBX3              	100.00%
Bootstrap support for L0P8M6 as seed ortholog is 100%.
Bootstrap support for H3DBX3 as seed ortholog is 100%.

Group of orthologs #105. Best score 662 bits
Score difference with first non-orthologous sequence - P.jiroveci:662 T.nigroviridis:215

L0PBN5              	100.00%		H3CA40              	100.00%
Bootstrap support for L0PBN5 as seed ortholog is 100%.
Bootstrap support for H3CA40 as seed ortholog is 99%.

Group of orthologs #106. Best score 660 bits
Score difference with first non-orthologous sequence - P.jiroveci:660 T.nigroviridis:463

L0P976              	100.00%		H3CG97              	100.00%
Bootstrap support for L0P976 as seed ortholog is 100%.
Bootstrap support for H3CG97 as seed ortholog is 100%.

Group of orthologs #107. Best score 660 bits
Score difference with first non-orthologous sequence - P.jiroveci:660 T.nigroviridis:415

L0P8Y6              	100.00%		H3DGI8              	100.00%
Bootstrap support for L0P8Y6 as seed ortholog is 100%.
Bootstrap support for H3DGI8 as seed ortholog is 100%.

Group of orthologs #108. Best score 657 bits
Score difference with first non-orthologous sequence - P.jiroveci:657 T.nigroviridis:657

L0PEK9              	100.00%		H3CCI0              	100.00%
Bootstrap support for L0PEK9 as seed ortholog is 100%.
Bootstrap support for H3CCI0 as seed ortholog is 100%.

Group of orthologs #109. Best score 656 bits
Score difference with first non-orthologous sequence - P.jiroveci:656 T.nigroviridis:656

L0PEQ8              	100.00%		H3DGB7              	100.00%
                    	       		H3CRB8              	44.55%
                    	       		H3DCC2              	43.36%
Bootstrap support for L0PEQ8 as seed ortholog is 100%.
Bootstrap support for H3DGB7 as seed ortholog is 100%.

Group of orthologs #110. Best score 653 bits
Score difference with first non-orthologous sequence - P.jiroveci:653 T.nigroviridis:559

L0PA41              	100.00%		H3CIA2              	100.00%
Bootstrap support for L0PA41 as seed ortholog is 100%.
Bootstrap support for H3CIA2 as seed ortholog is 100%.

Group of orthologs #111. Best score 653 bits
Score difference with first non-orthologous sequence - P.jiroveci:653 T.nigroviridis:653

L0PC65              	100.00%		H3CWR0              	100.00%
Bootstrap support for L0PC65 as seed ortholog is 100%.
Bootstrap support for H3CWR0 as seed ortholog is 100%.

Group of orthologs #112. Best score 649 bits
Score difference with first non-orthologous sequence - P.jiroveci:649 T.nigroviridis:649

L0P8G2              	100.00%		H3CL14              	100.00%
                    	       		H3CD15              	51.62%
Bootstrap support for L0P8G2 as seed ortholog is 100%.
Bootstrap support for H3CL14 as seed ortholog is 100%.

Group of orthologs #113. Best score 648 bits
Score difference with first non-orthologous sequence - P.jiroveci:648 T.nigroviridis:648

L0PDI6              	100.00%		H3CLY3              	100.00%
Bootstrap support for L0PDI6 as seed ortholog is 100%.
Bootstrap support for H3CLY3 as seed ortholog is 100%.

Group of orthologs #114. Best score 640 bits
Score difference with first non-orthologous sequence - P.jiroveci:640 T.nigroviridis:640

L0PDG3              	100.00%		H3CF52              	100.00%
Bootstrap support for L0PDG3 as seed ortholog is 100%.
Bootstrap support for H3CF52 as seed ortholog is 100%.

Group of orthologs #115. Best score 640 bits
Score difference with first non-orthologous sequence - P.jiroveci:640 T.nigroviridis:640

L0P7V2              	100.00%		H3DE43              	100.00%
Bootstrap support for L0P7V2 as seed ortholog is 100%.
Bootstrap support for H3DE43 as seed ortholog is 100%.

Group of orthologs #116. Best score 639 bits
Score difference with first non-orthologous sequence - P.jiroveci:639 T.nigroviridis:201

L0PDJ1              	100.00%		H3CM65              	100.00%
Bootstrap support for L0PDJ1 as seed ortholog is 100%.
Bootstrap support for H3CM65 as seed ortholog is 100%.

Group of orthologs #117. Best score 638 bits
Score difference with first non-orthologous sequence - P.jiroveci:638 T.nigroviridis:423

L0PFS2              	100.00%		H3CKF5              	100.00%
Bootstrap support for L0PFS2 as seed ortholog is 100%.
Bootstrap support for H3CKF5 as seed ortholog is 100%.

Group of orthologs #118. Best score 638 bits
Score difference with first non-orthologous sequence - P.jiroveci:638 T.nigroviridis:505

L0PGS4              	100.00%		Q4RS02              	100.00%
Bootstrap support for L0PGS4 as seed ortholog is 100%.
Bootstrap support for Q4RS02 as seed ortholog is 100%.

Group of orthologs #119. Best score 634 bits
Score difference with first non-orthologous sequence - P.jiroveci:634 T.nigroviridis:634

L0PAP2              	100.00%		H3CXM9              	100.00%
Bootstrap support for L0PAP2 as seed ortholog is 100%.
Bootstrap support for H3CXM9 as seed ortholog is 100%.

Group of orthologs #120. Best score 624 bits
Score difference with first non-orthologous sequence - P.jiroveci:624 T.nigroviridis:344

L0PG19              	100.00%		H3C6G2              	100.00%
                    	       		H3CYV4              	14.55%
Bootstrap support for L0PG19 as seed ortholog is 100%.
Bootstrap support for H3C6G2 as seed ortholog is 100%.

Group of orthologs #121. Best score 621 bits
Score difference with first non-orthologous sequence - P.jiroveci:621 T.nigroviridis:562

L0PDM6              	100.00%		H3D1U3              	100.00%
Bootstrap support for L0PDM6 as seed ortholog is 100%.
Bootstrap support for H3D1U3 as seed ortholog is 100%.

Group of orthologs #122. Best score 617 bits
Score difference with first non-orthologous sequence - P.jiroveci:617 T.nigroviridis:617

L0P773              	100.00%		H3D9X5              	100.00%
Bootstrap support for L0P773 as seed ortholog is 100%.
Bootstrap support for H3D9X5 as seed ortholog is 100%.

Group of orthologs #123. Best score 615 bits
Score difference with first non-orthologous sequence - P.jiroveci:615 T.nigroviridis:476

L0PEP7              	100.00%		H3CM73              	100.00%
Bootstrap support for L0PEP7 as seed ortholog is 100%.
Bootstrap support for H3CM73 as seed ortholog is 100%.

Group of orthologs #124. Best score 614 bits
Score difference with first non-orthologous sequence - P.jiroveci:614 T.nigroviridis:614

L0PAX4              	100.00%		H3D231              	100.00%
Bootstrap support for L0PAX4 as seed ortholog is 100%.
Bootstrap support for H3D231 as seed ortholog is 100%.

Group of orthologs #125. Best score 613 bits
Score difference with first non-orthologous sequence - P.jiroveci:613 T.nigroviridis:613

L0P8F2              	100.00%		H3DC96              	100.00%
L0PAK7              	100.00%		
Bootstrap support for L0P8F2 as seed ortholog is 100%.
Bootstrap support for L0PAK7 as seed ortholog is 100%.
Bootstrap support for H3DC96 as seed ortholog is 100%.

Group of orthologs #126. Best score 613 bits
Score difference with first non-orthologous sequence - P.jiroveci:472 T.nigroviridis:264

L0P8E7              	100.00%		H3DKE7              	100.00%
Bootstrap support for L0P8E7 as seed ortholog is 100%.
Bootstrap support for H3DKE7 as seed ortholog is 100%.

Group of orthologs #127. Best score 611 bits
Score difference with first non-orthologous sequence - P.jiroveci:611 T.nigroviridis:611

L0PCV7              	100.00%		Q4SNJ7              	100.00%
Bootstrap support for L0PCV7 as seed ortholog is 100%.
Bootstrap support for Q4SNJ7 as seed ortholog is 100%.

Group of orthologs #128. Best score 610 bits
Score difference with first non-orthologous sequence - P.jiroveci:610 T.nigroviridis:536

L0PD32              	100.00%		H3DAW8              	100.00%
L0PD26              	93.72%		
Bootstrap support for L0PD32 as seed ortholog is 100%.
Bootstrap support for H3DAW8 as seed ortholog is 100%.

Group of orthologs #129. Best score 609 bits
Score difference with first non-orthologous sequence - P.jiroveci:609 T.nigroviridis:609

L0PF80              	100.00%		H3CZV5              	100.00%
Bootstrap support for L0PF80 as seed ortholog is 100%.
Bootstrap support for H3CZV5 as seed ortholog is 100%.

Group of orthologs #130. Best score 609 bits
Score difference with first non-orthologous sequence - P.jiroveci:609 T.nigroviridis:609

L0PDD5              	100.00%		H3D4R7              	100.00%
Bootstrap support for L0PDD5 as seed ortholog is 100%.
Bootstrap support for H3D4R7 as seed ortholog is 100%.

Group of orthologs #131. Best score 607 bits
Score difference with first non-orthologous sequence - P.jiroveci:607 T.nigroviridis:607

L0PB96              	100.00%		H3CDX4              	100.00%
Bootstrap support for L0PB96 as seed ortholog is 100%.
Bootstrap support for H3CDX4 as seed ortholog is 100%.

Group of orthologs #132. Best score 606 bits
Score difference with first non-orthologous sequence - P.jiroveci:606 T.nigroviridis:606

L0P9S1              	100.00%		H3CZ45              	100.00%
Bootstrap support for L0P9S1 as seed ortholog is 100%.
Bootstrap support for H3CZ45 as seed ortholog is 100%.

Group of orthologs #133. Best score 605 bits
Score difference with first non-orthologous sequence - P.jiroveci:605 T.nigroviridis:605

L0P7N3              	100.00%		H3D3A4              	100.00%
                    	       		H3DKS6              	60.51%
Bootstrap support for L0P7N3 as seed ortholog is 100%.
Bootstrap support for H3D3A4 as seed ortholog is 100%.

Group of orthologs #134. Best score 605 bits
Score difference with first non-orthologous sequence - P.jiroveci:605 T.nigroviridis:375

L0PAR0              	100.00%		H3D2A4              	100.00%
Bootstrap support for L0PAR0 as seed ortholog is 100%.
Bootstrap support for H3D2A4 as seed ortholog is 100%.

Group of orthologs #135. Best score 602 bits
Score difference with first non-orthologous sequence - P.jiroveci:270 T.nigroviridis:347

L0PD31              	100.00%		H3CSW2              	100.00%
Bootstrap support for L0PD31 as seed ortholog is 99%.
Bootstrap support for H3CSW2 as seed ortholog is 100%.

Group of orthologs #136. Best score 600 bits
Score difference with first non-orthologous sequence - P.jiroveci:600 T.nigroviridis:409

L0PGT9              	100.00%		H3BZL5              	100.00%
                    	       		H3CR83              	34.17%
Bootstrap support for L0PGT9 as seed ortholog is 100%.
Bootstrap support for H3BZL5 as seed ortholog is 100%.

Group of orthologs #137. Best score 596 bits
Score difference with first non-orthologous sequence - P.jiroveci:291 T.nigroviridis:354

L0PG07              	100.00%		H3DE58              	100.00%
Bootstrap support for L0PG07 as seed ortholog is 100%.
Bootstrap support for H3DE58 as seed ortholog is 100%.

Group of orthologs #138. Best score 595 bits
Score difference with first non-orthologous sequence - P.jiroveci:298 T.nigroviridis:301

L0P8L4              	100.00%		H3CIK2              	100.00%
Bootstrap support for L0P8L4 as seed ortholog is 100%.
Bootstrap support for H3CIK2 as seed ortholog is 100%.

Group of orthologs #139. Best score 594 bits
Score difference with first non-orthologous sequence - P.jiroveci:344 T.nigroviridis:324

L0P853              	100.00%		Q4RRC6              	100.00%
L0P8M8              	55.37%		H3CD26              	47.96%
Bootstrap support for L0P853 as seed ortholog is 100%.
Bootstrap support for Q4RRC6 as seed ortholog is 100%.

Group of orthologs #140. Best score 592 bits
Score difference with first non-orthologous sequence - P.jiroveci:592 T.nigroviridis:592

L0PBJ1              	100.00%		H3C0E7              	100.00%
Bootstrap support for L0PBJ1 as seed ortholog is 100%.
Bootstrap support for H3C0E7 as seed ortholog is 100%.

Group of orthologs #141. Best score 592 bits
Score difference with first non-orthologous sequence - P.jiroveci:244 T.nigroviridis:241

L0PEK2              	100.00%		H3C3Z7              	100.00%
Bootstrap support for L0PEK2 as seed ortholog is 99%.
Bootstrap support for H3C3Z7 as seed ortholog is 99%.

Group of orthologs #142. Best score 591 bits
Score difference with first non-orthologous sequence - P.jiroveci:212 T.nigroviridis:467

L0PBH4              	100.00%		Q4RG22              	100.00%
                    	       		H3DBR9              	59.09%
                    	       		H3D1L0              	35.23%
                    	       		H3DIM0              	10.23%
Bootstrap support for L0PBH4 as seed ortholog is 100%.
Bootstrap support for Q4RG22 as seed ortholog is 100%.

Group of orthologs #143. Best score 590 bits
Score difference with first non-orthologous sequence - P.jiroveci:590 T.nigroviridis:590

L0P7K0              	100.00%		H3CF53              	100.00%
Bootstrap support for L0P7K0 as seed ortholog is 100%.
Bootstrap support for H3CF53 as seed ortholog is 100%.

Group of orthologs #144. Best score 581 bits
Score difference with first non-orthologous sequence - P.jiroveci:581 T.nigroviridis:581

L0PFT7              	100.00%		H3D1Q6              	100.00%
Bootstrap support for L0PFT7 as seed ortholog is 100%.
Bootstrap support for H3D1Q6 as seed ortholog is 100%.

Group of orthologs #145. Best score 577 bits
Score difference with first non-orthologous sequence - P.jiroveci:577 T.nigroviridis:577

L0P7T0              	100.00%		H3CDZ7              	100.00%
                    	       		H3CTS1              	28.90%
Bootstrap support for L0P7T0 as seed ortholog is 100%.
Bootstrap support for H3CDZ7 as seed ortholog is 100%.

Group of orthologs #146. Best score 577 bits
Score difference with first non-orthologous sequence - P.jiroveci:577 T.nigroviridis:577

L0PDR3              	100.00%		Q4S5X1              	100.00%
Bootstrap support for L0PDR3 as seed ortholog is 100%.
Bootstrap support for Q4S5X1 as seed ortholog is 100%.

Group of orthologs #147. Best score 576 bits
Score difference with first non-orthologous sequence - P.jiroveci:576 T.nigroviridis:576

L0PA45              	100.00%		H3D5C4              	100.00%
Bootstrap support for L0PA45 as seed ortholog is 100%.
Bootstrap support for H3D5C4 as seed ortholog is 100%.

Group of orthologs #148. Best score 575 bits
Score difference with first non-orthologous sequence - P.jiroveci:575 T.nigroviridis:575

L0PG37              	100.00%		H3D068              	100.00%
                    	       		H3DIS8              	65.91%
                    	       		H3D777              	53.34%
                    	       		H3CZI8              	6.69%
Bootstrap support for L0PG37 as seed ortholog is 100%.
Bootstrap support for H3D068 as seed ortholog is 100%.

Group of orthologs #149. Best score 575 bits
Score difference with first non-orthologous sequence - P.jiroveci:575 T.nigroviridis:575

L0P917              	100.00%		H3DGL7              	100.00%
L0PF20              	85.92%		
Bootstrap support for L0P917 as seed ortholog is 100%.
Bootstrap support for H3DGL7 as seed ortholog is 100%.

Group of orthologs #150. Best score 573 bits
Score difference with first non-orthologous sequence - P.jiroveci:573 T.nigroviridis:120

L0PBW1              	100.00%		H3CV55              	100.00%
                    	       		H3D5B8              	46.39%
Bootstrap support for L0PBW1 as seed ortholog is 100%.
Bootstrap support for H3CV55 as seed ortholog is 99%.

Group of orthologs #151. Best score 569 bits
Score difference with first non-orthologous sequence - P.jiroveci:569 T.nigroviridis:569

L0PHB7              	100.00%		Q4RVN6              	100.00%
Bootstrap support for L0PHB7 as seed ortholog is 100%.
Bootstrap support for Q4RVN6 as seed ortholog is 100%.

Group of orthologs #152. Best score 568 bits
Score difference with first non-orthologous sequence - P.jiroveci:568 T.nigroviridis:568

L0P9D4              	100.00%		H3D119              	100.00%
                    	       		H3DKX4              	36.33%
Bootstrap support for L0P9D4 as seed ortholog is 100%.
Bootstrap support for H3D119 as seed ortholog is 100%.

Group of orthologs #153. Best score 567 bits
Score difference with first non-orthologous sequence - P.jiroveci:55 T.nigroviridis:150

L0PC64              	100.00%		H3CB69              	100.00%
Bootstrap support for L0PC64 as seed ortholog is 97%.
Bootstrap support for H3CB69 as seed ortholog is 100%.

Group of orthologs #154. Best score 564 bits
Score difference with first non-orthologous sequence - P.jiroveci:383 T.nigroviridis:220

L0PDY0              	100.00%		H3CMA7              	100.00%
                    	       		H3DAJ6              	19.33%
Bootstrap support for L0PDY0 as seed ortholog is 100%.
Bootstrap support for H3CMA7 as seed ortholog is 100%.

Group of orthologs #155. Best score 564 bits
Score difference with first non-orthologous sequence - P.jiroveci:564 T.nigroviridis:307

L0PC44              	100.00%		H3CGN6              	100.00%
Bootstrap support for L0PC44 as seed ortholog is 100%.
Bootstrap support for H3CGN6 as seed ortholog is 100%.

Group of orthologs #156. Best score 564 bits
Score difference with first non-orthologous sequence - P.jiroveci:564 T.nigroviridis:564

L0PA85              	100.00%		H3CZE5              	100.00%
Bootstrap support for L0PA85 as seed ortholog is 100%.
Bootstrap support for H3CZE5 as seed ortholog is 100%.

Group of orthologs #157. Best score 559 bits
Score difference with first non-orthologous sequence - P.jiroveci:315 T.nigroviridis:279

L0PFW1              	100.00%		H3CML9              	100.00%
                    	       		H3C789              	61.98%
                    	       		H3DBG2              	51.89%
Bootstrap support for L0PFW1 as seed ortholog is 100%.
Bootstrap support for H3CML9 as seed ortholog is 100%.

Group of orthologs #158. Best score 556 bits
Score difference with first non-orthologous sequence - P.jiroveci:385 T.nigroviridis:340

L0PCD8              	100.00%		H3CIN2              	100.00%
Bootstrap support for L0PCD8 as seed ortholog is 100%.
Bootstrap support for H3CIN2 as seed ortholog is 100%.

Group of orthologs #159. Best score 553 bits
Score difference with first non-orthologous sequence - P.jiroveci:553 T.nigroviridis:553

L0PBM4              	100.00%		H3CFS8              	100.00%
                    	       		H3DDI2              	26.83%
Bootstrap support for L0PBM4 as seed ortholog is 100%.
Bootstrap support for H3CFS8 as seed ortholog is 100%.

Group of orthologs #160. Best score 549 bits
Score difference with first non-orthologous sequence - P.jiroveci:4 T.nigroviridis:80

L0P9J9              	100.00%		H3C0Z3              	100.00%
                    	       		H3CZQ9              	16.20%
Bootstrap support for L0P9J9 as seed ortholog is 49%.
Alternative seed ortholog is L0PF72 (4 bits away from this cluster)
Bootstrap support for H3C0Z3 as seed ortholog is 94%.

Group of orthologs #161. Best score 549 bits
Score difference with first non-orthologous sequence - P.jiroveci:549 T.nigroviridis:549

L0P958              	100.00%		H3CF70              	100.00%
Bootstrap support for L0P958 as seed ortholog is 100%.
Bootstrap support for H3CF70 as seed ortholog is 100%.

Group of orthologs #162. Best score 545 bits
Score difference with first non-orthologous sequence - P.jiroveci:188 T.nigroviridis:545

L0P7D9              	100.00%		H3DF90              	100.00%
                    	       		H3DNG5              	49.53%
Bootstrap support for L0P7D9 as seed ortholog is 100%.
Bootstrap support for H3DF90 as seed ortholog is 100%.

Group of orthologs #163. Best score 545 bits
Score difference with first non-orthologous sequence - P.jiroveci:545 T.nigroviridis:339

L0PA75              	100.00%		H3DL57              	100.00%
                    	       		H3CG10              	48.66%
Bootstrap support for L0PA75 as seed ortholog is 100%.
Bootstrap support for H3DL57 as seed ortholog is 100%.

Group of orthologs #164. Best score 545 bits
Score difference with first non-orthologous sequence - P.jiroveci:15 T.nigroviridis:264

L0PGY9              	100.00%		Q4T0U0              	100.00%
                    	       		H3DHM8              	63.56%
Bootstrap support for L0PGY9 as seed ortholog is 66%.
Alternative seed ortholog is L0PCK5 (15 bits away from this cluster)
Bootstrap support for Q4T0U0 as seed ortholog is 100%.

Group of orthologs #165. Best score 541 bits
Score difference with first non-orthologous sequence - P.jiroveci:541 T.nigroviridis:541

L0P6R7              	100.00%		H3DCM5              	100.00%
Bootstrap support for L0P6R7 as seed ortholog is 100%.
Bootstrap support for H3DCM5 as seed ortholog is 100%.

Group of orthologs #166. Best score 540 bits
Score difference with first non-orthologous sequence - P.jiroveci:540 T.nigroviridis:540

L0PCP1              	100.00%		H3DNN0              	100.00%
Bootstrap support for L0PCP1 as seed ortholog is 100%.
Bootstrap support for H3DNN0 as seed ortholog is 100%.

Group of orthologs #167. Best score 536 bits
Score difference with first non-orthologous sequence - P.jiroveci:536 T.nigroviridis:536

L0P9U3              	100.00%		H3CGC3              	100.00%
Bootstrap support for L0P9U3 as seed ortholog is 100%.
Bootstrap support for H3CGC3 as seed ortholog is 100%.

Group of orthologs #168. Best score 535 bits
Score difference with first non-orthologous sequence - P.jiroveci:535 T.nigroviridis:420

L0P802              	100.00%		H3CUT0              	100.00%
                    	       		H3D706              	72.19%
                    	       		H3DHM6              	46.99%
                    	       		H3DKL7              	36.30%
Bootstrap support for L0P802 as seed ortholog is 100%.
Bootstrap support for H3CUT0 as seed ortholog is 100%.

Group of orthologs #169. Best score 531 bits
Score difference with first non-orthologous sequence - P.jiroveci:531 T.nigroviridis:531

L0PBR9              	100.00%		H3CTC8              	100.00%
                    	       		Q4SJ84              	100.00%
                    	       		H3D7K5              	10.57%
Bootstrap support for L0PBR9 as seed ortholog is 100%.
Bootstrap support for H3CTC8 as seed ortholog is 100%.
Bootstrap support for Q4SJ84 as seed ortholog is 100%.

Group of orthologs #170. Best score 531 bits
Score difference with first non-orthologous sequence - P.jiroveci:205 T.nigroviridis:314

L0P6X8              	100.00%		H3CR41              	100.00%
Bootstrap support for L0P6X8 as seed ortholog is 99%.
Bootstrap support for H3CR41 as seed ortholog is 100%.

Group of orthologs #171. Best score 530 bits
Score difference with first non-orthologous sequence - P.jiroveci:530 T.nigroviridis:530

L0PAN9              	100.00%		H3CF93              	100.00%
L0PID8              	82.79%		
Bootstrap support for L0PAN9 as seed ortholog is 100%.
Bootstrap support for H3CF93 as seed ortholog is 100%.

Group of orthologs #172. Best score 527 bits
Score difference with first non-orthologous sequence - P.jiroveci:527 T.nigroviridis:527

L0PCX1              	100.00%		H3CNM2              	100.00%
                    	       		H3CL90              	14.64%
Bootstrap support for L0PCX1 as seed ortholog is 100%.
Bootstrap support for H3CNM2 as seed ortholog is 100%.

Group of orthologs #173. Best score 527 bits
Score difference with first non-orthologous sequence - P.jiroveci:527 T.nigroviridis:327

L0P7Y5              	100.00%		H3CFW6              	100.00%
Bootstrap support for L0P7Y5 as seed ortholog is 100%.
Bootstrap support for H3CFW6 as seed ortholog is 100%.

Group of orthologs #174. Best score 527 bits
Score difference with first non-orthologous sequence - P.jiroveci:473 T.nigroviridis:527

L0P7R1              	100.00%		H3D084              	100.00%
Bootstrap support for L0P7R1 as seed ortholog is 100%.
Bootstrap support for H3D084 as seed ortholog is 100%.

Group of orthologs #175. Best score 526 bits
Score difference with first non-orthologous sequence - P.jiroveci:526 T.nigroviridis:219

L0P905              	100.00%		H3D2W6              	100.00%
                    	       		H3DE78              	25.97%
                    	       		H3CKT2              	12.48%
                    	       		H3CYA6              	10.81%
                    	       		H3DGG8              	9.80%
                    	       		H3CEW8              	7.89%
                    	       		H3D3E1              	7.70%
                    	       		H3BYM0              	5.88%
Bootstrap support for L0P905 as seed ortholog is 100%.
Bootstrap support for H3D2W6 as seed ortholog is 99%.

Group of orthologs #176. Best score 525 bits
Score difference with first non-orthologous sequence - P.jiroveci:525 T.nigroviridis:317

L0P9I8              	100.00%		H3CQC6              	100.00%
                    	       		H3DEJ4              	73.62%
Bootstrap support for L0P9I8 as seed ortholog is 100%.
Bootstrap support for H3CQC6 as seed ortholog is 100%.

Group of orthologs #177. Best score 520 bits
Score difference with first non-orthologous sequence - P.jiroveci:520 T.nigroviridis:148

L0P9A8              	100.00%		H3DAL2              	100.00%
L0PHB9              	100.00%		
Bootstrap support for L0P9A8 as seed ortholog is 100%.
Bootstrap support for L0PHB9 as seed ortholog is 100%.
Bootstrap support for H3DAL2 as seed ortholog is 99%.

Group of orthologs #178. Best score 520 bits
Score difference with first non-orthologous sequence - P.jiroveci:520 T.nigroviridis:520

L0PCT1              	100.00%		H3D2L1              	100.00%
Bootstrap support for L0PCT1 as seed ortholog is 100%.
Bootstrap support for H3D2L1 as seed ortholog is 100%.

Group of orthologs #179. Best score 519 bits
Score difference with first non-orthologous sequence - P.jiroveci:288 T.nigroviridis:291

L0PEP2              	100.00%		H3DLZ1              	100.00%
Bootstrap support for L0PEP2 as seed ortholog is 100%.
Bootstrap support for H3DLZ1 as seed ortholog is 100%.

Group of orthologs #180. Best score 518 bits
Score difference with first non-orthologous sequence - P.jiroveci:518 T.nigroviridis:275

L0P8C8              	100.00%		H3CZ59              	100.00%
Bootstrap support for L0P8C8 as seed ortholog is 100%.
Bootstrap support for H3CZ59 as seed ortholog is 100%.

Group of orthologs #181. Best score 514 bits
Score difference with first non-orthologous sequence - P.jiroveci:514 T.nigroviridis:514

L0PEA0              	100.00%		H3D8F0              	100.00%
Bootstrap support for L0PEA0 as seed ortholog is 100%.
Bootstrap support for H3D8F0 as seed ortholog is 100%.

Group of orthologs #182. Best score 510 bits
Score difference with first non-orthologous sequence - P.jiroveci:343 T.nigroviridis:510

L0PAA4              	100.00%		H3CWE5              	100.00%
                    	       		H3DGV4              	41.98%
Bootstrap support for L0PAA4 as seed ortholog is 100%.
Bootstrap support for H3CWE5 as seed ortholog is 100%.

Group of orthologs #183. Best score 509 bits
Score difference with first non-orthologous sequence - P.jiroveci:509 T.nigroviridis:368

L0PBI1              	100.00%		H3DJ04              	100.00%
                    	       		H3CU62              	44.63%
Bootstrap support for L0PBI1 as seed ortholog is 100%.
Bootstrap support for H3DJ04 as seed ortholog is 100%.

Group of orthologs #184. Best score 506 bits
Score difference with first non-orthologous sequence - P.jiroveci:147 T.nigroviridis:236

L0P718              	100.00%		H3DJN5              	100.00%
Bootstrap support for L0P718 as seed ortholog is 99%.
Bootstrap support for H3DJN5 as seed ortholog is 100%.

Group of orthologs #185. Best score 505 bits
Score difference with first non-orthologous sequence - P.jiroveci:505 T.nigroviridis:257

L0PBP3              	100.00%		H3C4P6              	100.00%
                    	       		H3CVP3              	56.46%
Bootstrap support for L0PBP3 as seed ortholog is 100%.
Bootstrap support for H3C4P6 as seed ortholog is 100%.

Group of orthologs #186. Best score 505 bits
Score difference with first non-orthologous sequence - P.jiroveci:505 T.nigroviridis:243

L0PET9              	100.00%		H3DKE5              	100.00%
                    	       		H3CY30              	66.49%
Bootstrap support for L0PET9 as seed ortholog is 100%.
Bootstrap support for H3DKE5 as seed ortholog is 100%.

Group of orthologs #187. Best score 505 bits
Score difference with first non-orthologous sequence - P.jiroveci:505 T.nigroviridis:311

L0PB12              	100.00%		H3C2X6              	100.00%
Bootstrap support for L0PB12 as seed ortholog is 100%.
Bootstrap support for H3C2X6 as seed ortholog is 100%.

Group of orthologs #188. Best score 504 bits
Score difference with first non-orthologous sequence - P.jiroveci:504 T.nigroviridis:398

L0PBU6              	100.00%		H3D3X4              	100.00%
Bootstrap support for L0PBU6 as seed ortholog is 100%.
Bootstrap support for H3D3X4 as seed ortholog is 100%.

Group of orthologs #189. Best score 503 bits
Score difference with first non-orthologous sequence - P.jiroveci:503 T.nigroviridis:380

L0PAS3              	100.00%		H3C4A9              	100.00%
                    	       		H3C4M3              	39.68%
Bootstrap support for L0PAS3 as seed ortholog is 100%.
Bootstrap support for H3C4A9 as seed ortholog is 100%.

Group of orthologs #190. Best score 502 bits
Score difference with first non-orthologous sequence - P.jiroveci:502 T.nigroviridis:413

L0PCA7              	100.00%		H3D6U4              	100.00%
Bootstrap support for L0PCA7 as seed ortholog is 100%.
Bootstrap support for H3D6U4 as seed ortholog is 100%.

Group of orthologs #191. Best score 502 bits
Score difference with first non-orthologous sequence - P.jiroveci:502 T.nigroviridis:353

L0P9G2              	100.00%		Q4S9H0              	100.00%
Bootstrap support for L0P9G2 as seed ortholog is 100%.
Bootstrap support for Q4S9H0 as seed ortholog is 100%.

Group of orthologs #192. Best score 500 bits
Score difference with first non-orthologous sequence - P.jiroveci:500 T.nigroviridis:500

L0PBG8              	100.00%		H3CF18              	100.00%
Bootstrap support for L0PBG8 as seed ortholog is 100%.
Bootstrap support for H3CF18 as seed ortholog is 100%.

Group of orthologs #193. Best score 500 bits
Score difference with first non-orthologous sequence - P.jiroveci:500 T.nigroviridis:413

L0PDG5              	100.00%		Q4SRZ8              	100.00%
Bootstrap support for L0PDG5 as seed ortholog is 100%.
Bootstrap support for Q4SRZ8 as seed ortholog is 100%.

Group of orthologs #194. Best score 498 bits
Score difference with first non-orthologous sequence - P.jiroveci:117 T.nigroviridis:285

L0P850              	100.00%		H3C664              	100.00%
Bootstrap support for L0P850 as seed ortholog is 99%.
Bootstrap support for H3C664 as seed ortholog is 100%.

Group of orthologs #195. Best score 497 bits
Score difference with first non-orthologous sequence - P.jiroveci:497 T.nigroviridis:408

L0PB50              	100.00%		H3BYG8              	100.00%
                    	       		H3D560              	44.35%
Bootstrap support for L0PB50 as seed ortholog is 100%.
Bootstrap support for H3BYG8 as seed ortholog is 100%.

Group of orthologs #196. Best score 497 bits
Score difference with first non-orthologous sequence - P.jiroveci:497 T.nigroviridis:374

L0P890              	100.00%		H3D908              	100.00%
                    	       		Q4TA90              	55.19%
Bootstrap support for L0P890 as seed ortholog is 100%.
Bootstrap support for H3D908 as seed ortholog is 100%.

Group of orthologs #197. Best score 497 bits
Score difference with first non-orthologous sequence - P.jiroveci:497 T.nigroviridis:432

L0P992              	100.00%		H3DJC1              	100.00%
                    	       		Q4T8N4              	70.30%
Bootstrap support for L0P992 as seed ortholog is 100%.
Bootstrap support for H3DJC1 as seed ortholog is 100%.

Group of orthologs #198. Best score 497 bits
Score difference with first non-orthologous sequence - P.jiroveci:497 T.nigroviridis:310

L0P6Y2              	100.00%		H3CE72              	100.00%
Bootstrap support for L0P6Y2 as seed ortholog is 100%.
Bootstrap support for H3CE72 as seed ortholog is 100%.

Group of orthologs #199. Best score 496 bits
Score difference with first non-orthologous sequence - P.jiroveci:496 T.nigroviridis:209

L0P7N1              	100.00%		Q4SEX7              	100.00%
                    	       		H3D5W6              	60.42%
Bootstrap support for L0P7N1 as seed ortholog is 100%.
Bootstrap support for Q4SEX7 as seed ortholog is 100%.

Group of orthologs #200. Best score 496 bits
Score difference with first non-orthologous sequence - P.jiroveci:316 T.nigroviridis:496

L0PFN9              	100.00%		H3CA69              	100.00%
Bootstrap support for L0PFN9 as seed ortholog is 100%.
Bootstrap support for H3CA69 as seed ortholog is 100%.

Group of orthologs #201. Best score 494 bits
Score difference with first non-orthologous sequence - P.jiroveci:494 T.nigroviridis:206

L0P7B5              	100.00%		H3DJB2              	100.00%
                    	       		H3C073              	41.91%
Bootstrap support for L0P7B5 as seed ortholog is 100%.
Bootstrap support for H3DJB2 as seed ortholog is 100%.

Group of orthologs #202. Best score 493 bits
Score difference with first non-orthologous sequence - P.jiroveci:493 T.nigroviridis:493

L0P8P8              	100.00%		H3CYU5              	100.00%
Bootstrap support for L0P8P8 as seed ortholog is 100%.
Bootstrap support for H3CYU5 as seed ortholog is 100%.

Group of orthologs #203. Best score 492 bits
Score difference with first non-orthologous sequence - P.jiroveci:492 T.nigroviridis:492

L0PAL6              	100.00%		H3CFR5              	100.00%
Bootstrap support for L0PAL6 as seed ortholog is 100%.
Bootstrap support for H3CFR5 as seed ortholog is 100%.

Group of orthologs #204. Best score 492 bits
Score difference with first non-orthologous sequence - P.jiroveci:492 T.nigroviridis:248

L0PE41              	100.00%		H3DPG5              	100.00%
Bootstrap support for L0PE41 as seed ortholog is 100%.
Bootstrap support for H3DPG5 as seed ortholog is 99%.

Group of orthologs #205. Best score 491 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 T.nigroviridis:310

L0PAI4              	100.00%		H3CJS5              	100.00%
                    	       		H3CY22              	56.14%
                    	       		H3C2W0              	50.93%
Bootstrap support for L0PAI4 as seed ortholog is 83%.
Bootstrap support for H3CJS5 as seed ortholog is 100%.

Group of orthologs #206. Best score 490 bits
Score difference with first non-orthologous sequence - P.jiroveci:490 T.nigroviridis:490

L0PG55              	100.00%		Q4S684              	100.00%
                    	       		H3CIL7              	56.49%
                    	       		H3DB06              	26.92%
Bootstrap support for L0PG55 as seed ortholog is 100%.
Bootstrap support for Q4S684 as seed ortholog is 100%.

Group of orthologs #207. Best score 490 bits
Score difference with first non-orthologous sequence - P.jiroveci:490 T.nigroviridis:490

L0PHY6              	100.00%		H3CZA5              	100.00%
Bootstrap support for L0PHY6 as seed ortholog is 100%.
Bootstrap support for H3CZA5 as seed ortholog is 100%.

Group of orthologs #208. Best score 490 bits
Score difference with first non-orthologous sequence - P.jiroveci:490 T.nigroviridis:490

L0PDU2              	100.00%		H3D7J5              	100.00%
Bootstrap support for L0PDU2 as seed ortholog is 100%.
Bootstrap support for H3D7J5 as seed ortholog is 100%.

Group of orthologs #209. Best score 489 bits
Score difference with first non-orthologous sequence - P.jiroveci:367 T.nigroviridis:93

L0PE30              	100.00%		H3CDS9              	100.00%
                    	       		H3DM83              	64.97%
Bootstrap support for L0PE30 as seed ortholog is 100%.
Bootstrap support for H3CDS9 as seed ortholog is 99%.

Group of orthologs #210. Best score 488 bits
Score difference with first non-orthologous sequence - P.jiroveci:488 T.nigroviridis:382

L0PDH7              	100.00%		H3DPE0              	100.00%
Bootstrap support for L0PDH7 as seed ortholog is 100%.
Bootstrap support for H3DPE0 as seed ortholog is 100%.

Group of orthologs #211. Best score 488 bits
Score difference with first non-orthologous sequence - P.jiroveci:488 T.nigroviridis:488

L0PB35              	100.00%		Q4T3B4              	100.00%
Bootstrap support for L0PB35 as seed ortholog is 100%.
Bootstrap support for Q4T3B4 as seed ortholog is 100%.

Group of orthologs #212. Best score 487 bits
Score difference with first non-orthologous sequence - P.jiroveci:487 T.nigroviridis:487

L0PFM4              	100.00%		H3D5V9              	100.00%
Bootstrap support for L0PFM4 as seed ortholog is 100%.
Bootstrap support for H3D5V9 as seed ortholog is 100%.

Group of orthologs #213. Best score 487 bits
Score difference with first non-orthologous sequence - P.jiroveci:487 T.nigroviridis:487

L0PCL9              	100.00%		H3DJ97              	100.00%
Bootstrap support for L0PCL9 as seed ortholog is 100%.
Bootstrap support for H3DJ97 as seed ortholog is 100%.

Group of orthologs #214. Best score 485 bits
Score difference with first non-orthologous sequence - P.jiroveci:485 T.nigroviridis:347

L0P8C2              	100.00%		H3CX80              	100.00%
Bootstrap support for L0P8C2 as seed ortholog is 100%.
Bootstrap support for H3CX80 as seed ortholog is 100%.

Group of orthologs #215. Best score 483 bits
Score difference with first non-orthologous sequence - P.jiroveci:483 T.nigroviridis:483

L0P7P1              	100.00%		H3DNU0              	100.00%
Bootstrap support for L0P7P1 as seed ortholog is 100%.
Bootstrap support for H3DNU0 as seed ortholog is 100%.

Group of orthologs #216. Best score 482 bits
Score difference with first non-orthologous sequence - P.jiroveci:482 T.nigroviridis:482

L0P8F1              	100.00%		H3D6F6              	100.00%
                    	       		H3DI58              	58.93%
                    	       		H3D733              	56.70%
                    	       		H3DKB3              	55.80%
                    	       		H3CI54              	54.02%
Bootstrap support for L0P8F1 as seed ortholog is 100%.
Bootstrap support for H3D6F6 as seed ortholog is 100%.

Group of orthologs #217. Best score 481 bits
Score difference with first non-orthologous sequence - P.jiroveci:481 T.nigroviridis:393

L0P921              	100.00%		H3CRI4              	100.00%
Bootstrap support for L0P921 as seed ortholog is 100%.
Bootstrap support for H3CRI4 as seed ortholog is 100%.

Group of orthologs #218. Best score 480 bits
Score difference with first non-orthologous sequence - P.jiroveci:164 T.nigroviridis:130

L0PAW8              	100.00%		H3CQH4              	100.00%
                    	       		H3DMF3              	7.06%
                    	       		H3CQ23              	5.07%
Bootstrap support for L0PAW8 as seed ortholog is 99%.
Bootstrap support for H3CQH4 as seed ortholog is 98%.

Group of orthologs #219. Best score 480 bits
Score difference with first non-orthologous sequence - P.jiroveci:480 T.nigroviridis:480

L0PEL0              	100.00%		H3C920              	100.00%
Bootstrap support for L0PEL0 as seed ortholog is 100%.
Bootstrap support for H3C920 as seed ortholog is 100%.

Group of orthologs #220. Best score 479 bits
Score difference with first non-orthologous sequence - P.jiroveci:415 T.nigroviridis:367

L0PCS2              	100.00%		H3DMI0              	100.00%
Bootstrap support for L0PCS2 as seed ortholog is 100%.
Bootstrap support for H3DMI0 as seed ortholog is 100%.

Group of orthologs #221. Best score 478 bits
Score difference with first non-orthologous sequence - P.jiroveci:183 T.nigroviridis:354

L0P8Z9              	100.00%		H3DQ41              	100.00%
Bootstrap support for L0P8Z9 as seed ortholog is 99%.
Bootstrap support for H3DQ41 as seed ortholog is 100%.

Group of orthologs #222. Best score 477 bits
Score difference with first non-orthologous sequence - P.jiroveci:364 T.nigroviridis:280

L0PC98              	100.00%		H3D7V1              	100.00%
Bootstrap support for L0PC98 as seed ortholog is 100%.
Bootstrap support for H3D7V1 as seed ortholog is 100%.

Group of orthologs #223. Best score 476 bits
Score difference with first non-orthologous sequence - P.jiroveci:256 T.nigroviridis:276

L0PF08              	100.00%		H3CXB6              	100.00%
                    	       		H3CP09              	65.45%
                    	       		H3CJE9              	56.98%
Bootstrap support for L0PF08 as seed ortholog is 100%.
Bootstrap support for H3CXB6 as seed ortholog is 100%.

Group of orthologs #224. Best score 474 bits
Score difference with first non-orthologous sequence - P.jiroveci:474 T.nigroviridis:474

L0PFC2              	100.00%		H3CHD5              	100.00%
Bootstrap support for L0PFC2 as seed ortholog is 100%.
Bootstrap support for H3CHD5 as seed ortholog is 100%.

Group of orthologs #225. Best score 473 bits
Score difference with first non-orthologous sequence - P.jiroveci:473 T.nigroviridis:473

L0PGB8              	100.00%		H3CZ72              	100.00%
Bootstrap support for L0PGB8 as seed ortholog is 100%.
Bootstrap support for H3CZ72 as seed ortholog is 100%.

Group of orthologs #226. Best score 473 bits
Score difference with first non-orthologous sequence - P.jiroveci:473 T.nigroviridis:473

L0PDC9              	100.00%		H3D6W2              	100.00%
Bootstrap support for L0PDC9 as seed ortholog is 100%.
Bootstrap support for H3D6W2 as seed ortholog is 100%.

Group of orthologs #227. Best score 472 bits
Score difference with first non-orthologous sequence - P.jiroveci:472 T.nigroviridis:472

L0PH85              	100.00%		H3D2X2              	100.00%
Bootstrap support for L0PH85 as seed ortholog is 100%.
Bootstrap support for H3D2X2 as seed ortholog is 100%.

Group of orthologs #228. Best score 469 bits
Score difference with first non-orthologous sequence - P.jiroveci:469 T.nigroviridis:469

L0PC09              	100.00%		H3CAL5              	100.00%
Bootstrap support for L0PC09 as seed ortholog is 100%.
Bootstrap support for H3CAL5 as seed ortholog is 100%.

Group of orthologs #229. Best score 469 bits
Score difference with first non-orthologous sequence - P.jiroveci:469 T.nigroviridis:469

L0PBW3              	100.00%		H3CVN4              	100.00%
Bootstrap support for L0PBW3 as seed ortholog is 100%.
Bootstrap support for H3CVN4 as seed ortholog is 100%.

Group of orthologs #230. Best score 469 bits
Score difference with first non-orthologous sequence - P.jiroveci:469 T.nigroviridis:469

L0PAP1              	100.00%		H3DFF4              	100.00%
Bootstrap support for L0PAP1 as seed ortholog is 100%.
Bootstrap support for H3DFF4 as seed ortholog is 100%.

Group of orthologs #231. Best score 468 bits
Score difference with first non-orthologous sequence - P.jiroveci:468 T.nigroviridis:468

L0PFI9              	100.00%		H3CDU9              	100.00%
Bootstrap support for L0PFI9 as seed ortholog is 100%.
Bootstrap support for H3CDU9 as seed ortholog is 100%.

Group of orthologs #232. Best score 467 bits
Score difference with first non-orthologous sequence - P.jiroveci:467 T.nigroviridis:237

L0P9V7              	100.00%		H3CLM9              	100.00%
                    	       		H3D180              	37.51%
Bootstrap support for L0P9V7 as seed ortholog is 100%.
Bootstrap support for H3CLM9 as seed ortholog is 99%.

Group of orthologs #233. Best score 467 bits
Score difference with first non-orthologous sequence - P.jiroveci:467 T.nigroviridis:467

L0PCS3              	100.00%		H3CDL0              	100.00%
Bootstrap support for L0PCS3 as seed ortholog is 100%.
Bootstrap support for H3CDL0 as seed ortholog is 100%.

Group of orthologs #234. Best score 465 bits
Score difference with first non-orthologous sequence - P.jiroveci:385 T.nigroviridis:184

L0PB67              	100.00%		H3C8L1              	100.00%
                    	       		H3CAZ7              	70.19%
Bootstrap support for L0PB67 as seed ortholog is 100%.
Bootstrap support for H3C8L1 as seed ortholog is 99%.

Group of orthologs #235. Best score 465 bits
Score difference with first non-orthologous sequence - P.jiroveci:465 T.nigroviridis:465

L0P969              	100.00%		H3CRR9              	100.00%
Bootstrap support for L0P969 as seed ortholog is 100%.
Bootstrap support for H3CRR9 as seed ortholog is 100%.

Group of orthologs #236. Best score 465 bits
Score difference with first non-orthologous sequence - P.jiroveci:400 T.nigroviridis:465

L0PBN1              	100.00%		H3CW90              	100.00%
Bootstrap support for L0PBN1 as seed ortholog is 100%.
Bootstrap support for H3CW90 as seed ortholog is 100%.

Group of orthologs #237. Best score 464 bits
Score difference with first non-orthologous sequence - P.jiroveci:464 T.nigroviridis:464

L0PER3              	100.00%		H3CSC6              	100.00%
Bootstrap support for L0PER3 as seed ortholog is 100%.
Bootstrap support for H3CSC6 as seed ortholog is 100%.

Group of orthologs #238. Best score 464 bits
Score difference with first non-orthologous sequence - P.jiroveci:464 T.nigroviridis:464

L0PG96              	100.00%		H3D6E2              	100.00%
Bootstrap support for L0PG96 as seed ortholog is 100%.
Bootstrap support for H3D6E2 as seed ortholog is 100%.

Group of orthologs #239. Best score 463 bits
Score difference with first non-orthologous sequence - P.jiroveci:463 T.nigroviridis:345

L0PGH3              	100.00%		H3C316              	100.00%
                    	       		H3CU51              	42.52%
Bootstrap support for L0PGH3 as seed ortholog is 100%.
Bootstrap support for H3C316 as seed ortholog is 100%.

Group of orthologs #240. Best score 463 bits
Score difference with first non-orthologous sequence - P.jiroveci:367 T.nigroviridis:204

L0PC38              	100.00%		H3CWT5              	100.00%
                    	       		H3CDC9              	66.97%
Bootstrap support for L0PC38 as seed ortholog is 100%.
Bootstrap support for H3CWT5 as seed ortholog is 100%.

Group of orthologs #241. Best score 462 bits
Score difference with first non-orthologous sequence - P.jiroveci:462 T.nigroviridis:326

L0P8N1              	100.00%		Q4T8U5              	100.00%
Bootstrap support for L0P8N1 as seed ortholog is 100%.
Bootstrap support for Q4T8U5 as seed ortholog is 100%.

Group of orthologs #242. Best score 461 bits
Score difference with first non-orthologous sequence - P.jiroveci:461 T.nigroviridis:461

L0PEZ0              	100.00%		H3C6I7              	100.00%
Bootstrap support for L0PEZ0 as seed ortholog is 100%.
Bootstrap support for H3C6I7 as seed ortholog is 100%.

Group of orthologs #243. Best score 454 bits
Score difference with first non-orthologous sequence - P.jiroveci:454 T.nigroviridis:454

L0PFZ9              	100.00%		H3D2I7              	100.00%
                    	       		H3CG41              	36.46%
Bootstrap support for L0PFZ9 as seed ortholog is 100%.
Bootstrap support for H3D2I7 as seed ortholog is 100%.

Group of orthologs #244. Best score 452 bits
Score difference with first non-orthologous sequence - P.jiroveci:452 T.nigroviridis:386

L0P9C8              	100.00%		H3BYT3              	100.00%
Bootstrap support for L0P9C8 as seed ortholog is 100%.
Bootstrap support for H3BYT3 as seed ortholog is 100%.

Group of orthologs #245. Best score 450 bits
Score difference with first non-orthologous sequence - P.jiroveci:450 T.nigroviridis:450

L0P8W6              	100.00%		H3CA62              	100.00%
Bootstrap support for L0P8W6 as seed ortholog is 100%.
Bootstrap support for H3CA62 as seed ortholog is 100%.

Group of orthologs #246. Best score 448 bits
Score difference with first non-orthologous sequence - P.jiroveci:448 T.nigroviridis:50

L0P9H5              	100.00%		H3CWX1              	100.00%
L0P8S4              	53.77%		H3DIY4              	37.38%
                    	       		H3CIR6              	11.41%
                    	       		H3DAT6              	10.39%
                    	       		H3CRP3              	9.65%
                    	       		H3D527              	8.07%
Bootstrap support for L0P9H5 as seed ortholog is 100%.
Bootstrap support for H3CWX1 as seed ortholog is 95%.

Group of orthologs #247. Best score 448 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 T.nigroviridis:448

L0PFW2              	100.00%		H3D913              	100.00%
Bootstrap support for L0PFW2 as seed ortholog is 98%.
Bootstrap support for H3D913 as seed ortholog is 100%.

Group of orthologs #248. Best score 447 bits
Score difference with first non-orthologous sequence - P.jiroveci:447 T.nigroviridis:447

L0PBV4              	100.00%		H3CPS1              	100.00%
Bootstrap support for L0PBV4 as seed ortholog is 100%.
Bootstrap support for H3CPS1 as seed ortholog is 100%.

Group of orthologs #249. Best score 446 bits
Score difference with first non-orthologous sequence - P.jiroveci:446 T.nigroviridis:446

L0PFR4              	100.00%		H3BZ20              	100.00%
Bootstrap support for L0PFR4 as seed ortholog is 100%.
Bootstrap support for H3BZ20 as seed ortholog is 100%.

Group of orthologs #250. Best score 446 bits
Score difference with first non-orthologous sequence - P.jiroveci:446 T.nigroviridis:446

L0PF23              	100.00%		H3CAW8              	100.00%
Bootstrap support for L0PF23 as seed ortholog is 100%.
Bootstrap support for H3CAW8 as seed ortholog is 100%.

Group of orthologs #251. Best score 444 bits
Score difference with first non-orthologous sequence - P.jiroveci:444 T.nigroviridis:444

L0P9C9              	100.00%		H3D026              	100.00%
Bootstrap support for L0P9C9 as seed ortholog is 100%.
Bootstrap support for H3D026 as seed ortholog is 100%.

Group of orthologs #252. Best score 442 bits
Score difference with first non-orthologous sequence - P.jiroveci:442 T.nigroviridis:236

L0P6W8              	100.00%		H3C148              	100.00%
L0PH46              	100.00%		
Bootstrap support for L0P6W8 as seed ortholog is 100%.
Bootstrap support for L0PH46 as seed ortholog is 100%.
Bootstrap support for H3C148 as seed ortholog is 100%.

Group of orthologs #253. Best score 440 bits
Score difference with first non-orthologous sequence - P.jiroveci:440 T.nigroviridis:364

L0PAC4              	100.00%		H3BYH0              	100.00%
L0P871              	98.23%		
Bootstrap support for L0PAC4 as seed ortholog is 100%.
Bootstrap support for H3BYH0 as seed ortholog is 100%.

Group of orthologs #254. Best score 439 bits
Score difference with first non-orthologous sequence - P.jiroveci:349 T.nigroviridis:270

L0PAL3              	100.00%		H3DCD1              	100.00%
                    	       		H3CJU9              	21.77%
                    	       		H3CPF0              	6.74%
Bootstrap support for L0PAL3 as seed ortholog is 100%.
Bootstrap support for H3DCD1 as seed ortholog is 100%.

Group of orthologs #255. Best score 438 bits
Score difference with first non-orthologous sequence - P.jiroveci:438 T.nigroviridis:349

L0PF52              	100.00%		H3BWV5              	100.00%
Bootstrap support for L0PF52 as seed ortholog is 100%.
Bootstrap support for H3BWV5 as seed ortholog is 100%.

Group of orthologs #256. Best score 438 bits
Score difference with first non-orthologous sequence - P.jiroveci:438 T.nigroviridis:265

L0PC99              	100.00%		H3CD73              	100.00%
Bootstrap support for L0PC99 as seed ortholog is 100%.
Bootstrap support for H3CD73 as seed ortholog is 100%.

Group of orthologs #257. Best score 438 bits
Score difference with first non-orthologous sequence - P.jiroveci:438 T.nigroviridis:438

L0PBT8              	100.00%		H3CIM1              	100.00%
Bootstrap support for L0PBT8 as seed ortholog is 100%.
Bootstrap support for H3CIM1 as seed ortholog is 100%.

Group of orthologs #258. Best score 438 bits
Score difference with first non-orthologous sequence - P.jiroveci:438 T.nigroviridis:438

L0PDM3              	100.00%		H3CPR4              	100.00%
Bootstrap support for L0PDM3 as seed ortholog is 100%.
Bootstrap support for H3CPR4 as seed ortholog is 100%.

Group of orthologs #259. Best score 438 bits
Score difference with first non-orthologous sequence - P.jiroveci:438 T.nigroviridis:248

L0PHE4              	100.00%		Q4RK67              	100.00%
Bootstrap support for L0PHE4 as seed ortholog is 100%.
Bootstrap support for Q4RK67 as seed ortholog is 100%.

Group of orthologs #260. Best score 437 bits
Score difference with first non-orthologous sequence - P.jiroveci:437 T.nigroviridis:437

L0PEE3              	100.00%		H3C338              	100.00%
                    	       		Q4SNA4              	42.06%
Bootstrap support for L0PEE3 as seed ortholog is 100%.
Bootstrap support for H3C338 as seed ortholog is 100%.

Group of orthologs #261. Best score 435 bits
Score difference with first non-orthologous sequence - P.jiroveci:435 T.nigroviridis:435

L0PF49              	100.00%		H3D8S5              	100.00%
Bootstrap support for L0PF49 as seed ortholog is 100%.
Bootstrap support for H3D8S5 as seed ortholog is 100%.

Group of orthologs #262. Best score 433 bits
Score difference with first non-orthologous sequence - P.jiroveci:433 T.nigroviridis:197

L0PGN1              	100.00%		H3CD60              	100.00%
                    	       		H3DHG2              	34.19%
                    	       		H3BVT5              	10.32%
Bootstrap support for L0PGN1 as seed ortholog is 100%.
Bootstrap support for H3CD60 as seed ortholog is 99%.

Group of orthologs #263. Best score 433 bits
Score difference with first non-orthologous sequence - P.jiroveci:433 T.nigroviridis:152

L0PFB1              	100.00%		H3CMP8              	100.00%
                    	       		H3CPW6              	49.71%
Bootstrap support for L0PFB1 as seed ortholog is 100%.
Bootstrap support for H3CMP8 as seed ortholog is 99%.

Group of orthologs #264. Best score 432 bits
Score difference with first non-orthologous sequence - P.jiroveci:432 T.nigroviridis:432

L0PFE7              	100.00%		H3D826              	100.00%
Bootstrap support for L0PFE7 as seed ortholog is 100%.
Bootstrap support for H3D826 as seed ortholog is 100%.

Group of orthologs #265. Best score 431 bits
Score difference with first non-orthologous sequence - P.jiroveci:249 T.nigroviridis:431

L0PGU0              	100.00%		Q4SLD9              	100.00%
Bootstrap support for L0PGU0 as seed ortholog is 100%.
Bootstrap support for Q4SLD9 as seed ortholog is 100%.

Group of orthologs #266. Best score 430 bits
Score difference with first non-orthologous sequence - P.jiroveci:430 T.nigroviridis:233

L0P8R6              	100.00%		H3CL93              	100.00%
Bootstrap support for L0P8R6 as seed ortholog is 100%.
Bootstrap support for H3CL93 as seed ortholog is 100%.

Group of orthologs #267. Best score 430 bits
Score difference with first non-orthologous sequence - P.jiroveci:430 T.nigroviridis:91

L0PGV4              	100.00%		H3D7V8              	100.00%
Bootstrap support for L0PGV4 as seed ortholog is 100%.
Bootstrap support for H3D7V8 as seed ortholog is 99%.

Group of orthologs #268. Best score 430 bits
Score difference with first non-orthologous sequence - P.jiroveci:430 T.nigroviridis:150

L0PFJ5              	100.00%		H3DCI3              	100.00%
Bootstrap support for L0PFJ5 as seed ortholog is 100%.
Bootstrap support for H3DCI3 as seed ortholog is 99%.

Group of orthologs #269. Best score 427 bits
Score difference with first non-orthologous sequence - P.jiroveci:97 T.nigroviridis:278

L0PFS3              	100.00%		H3CBT7              	100.00%
Bootstrap support for L0PFS3 as seed ortholog is 99%.
Bootstrap support for H3CBT7 as seed ortholog is 100%.

Group of orthologs #270. Best score 426 bits
Score difference with first non-orthologous sequence - P.jiroveci:426 T.nigroviridis:333

L0P7Z6              	100.00%		H3CYM5              	100.00%
Bootstrap support for L0P7Z6 as seed ortholog is 100%.
Bootstrap support for H3CYM5 as seed ortholog is 100%.

Group of orthologs #271. Best score 425 bits
Score difference with first non-orthologous sequence - P.jiroveci:425 T.nigroviridis:425

L0PBV8              	100.00%		H3DIC3              	100.00%
Bootstrap support for L0PBV8 as seed ortholog is 100%.
Bootstrap support for H3DIC3 as seed ortholog is 100%.

Group of orthologs #272. Best score 423 bits
Score difference with first non-orthologous sequence - P.jiroveci:423 T.nigroviridis:423

L0PAH2              	100.00%		H3CV18              	100.00%
Bootstrap support for L0PAH2 as seed ortholog is 100%.
Bootstrap support for H3CV18 as seed ortholog is 100%.

Group of orthologs #273. Best score 422 bits
Score difference with first non-orthologous sequence - P.jiroveci:422 T.nigroviridis:422

L0P6T8              	100.00%		H3CWR8              	100.00%
                    	       		H3DDA1              	53.65%
                    	       		H3CKR2              	40.42%
Bootstrap support for L0P6T8 as seed ortholog is 100%.
Bootstrap support for H3CWR8 as seed ortholog is 100%.

Group of orthologs #274. Best score 418 bits
Score difference with first non-orthologous sequence - P.jiroveci:418 T.nigroviridis:418

L0P7D2              	100.00%		H3DJI6              	100.00%
                    	       		H3CLV7              	13.52%
Bootstrap support for L0P7D2 as seed ortholog is 100%.
Bootstrap support for H3DJI6 as seed ortholog is 100%.

Group of orthologs #275. Best score 417 bits
Score difference with first non-orthologous sequence - P.jiroveci:203 T.nigroviridis:98

L0PAN3              	100.00%		H3CDM8              	100.00%
                    	       		H3CXF8              	59.76%
Bootstrap support for L0PAN3 as seed ortholog is 100%.
Bootstrap support for H3CDM8 as seed ortholog is 99%.

Group of orthologs #276. Best score 417 bits
Score difference with first non-orthologous sequence - P.jiroveci:417 T.nigroviridis:417

L0PBN0              	100.00%		H3CVR9              	100.00%
Bootstrap support for L0PBN0 as seed ortholog is 100%.
Bootstrap support for H3CVR9 as seed ortholog is 100%.

Group of orthologs #277. Best score 417 bits
Score difference with first non-orthologous sequence - P.jiroveci:417 T.nigroviridis:417

L0PCY5              	100.00%		H3DPY4              	100.00%
Bootstrap support for L0PCY5 as seed ortholog is 100%.
Bootstrap support for H3DPY4 as seed ortholog is 100%.

Group of orthologs #278. Best score 416 bits
Score difference with first non-orthologous sequence - P.jiroveci:416 T.nigroviridis:416

L0PFY1              	100.00%		H3CZM5              	100.00%
                    	       		H3DHY0              	100.00%
                    	       		H3DJA4              	53.65%
Bootstrap support for L0PFY1 as seed ortholog is 100%.
Bootstrap support for H3CZM5 as seed ortholog is 100%.
Bootstrap support for H3DHY0 as seed ortholog is 100%.

Group of orthologs #279. Best score 416 bits
Score difference with first non-orthologous sequence - P.jiroveci:416 T.nigroviridis:416

L0PGA8              	100.00%		H3CAD0              	100.00%
Bootstrap support for L0PGA8 as seed ortholog is 100%.
Bootstrap support for H3CAD0 as seed ortholog is 100%.

Group of orthologs #280. Best score 416 bits
Score difference with first non-orthologous sequence - P.jiroveci:416 T.nigroviridis:416

L0PDM0              	100.00%		H3CE82              	100.00%
Bootstrap support for L0PDM0 as seed ortholog is 100%.
Bootstrap support for H3CE82 as seed ortholog is 100%.

Group of orthologs #281. Best score 416 bits
Score difference with first non-orthologous sequence - P.jiroveci:416 T.nigroviridis:307

L0PAL8              	100.00%		H3CX13              	100.00%
Bootstrap support for L0PAL8 as seed ortholog is 100%.
Bootstrap support for H3CX13 as seed ortholog is 100%.

Group of orthologs #282. Best score 416 bits
Score difference with first non-orthologous sequence - P.jiroveci:117 T.nigroviridis:231

L0PGJ9              	100.00%		H3D2W2              	100.00%
Bootstrap support for L0PGJ9 as seed ortholog is 99%.
Bootstrap support for H3D2W2 as seed ortholog is 100%.

Group of orthologs #283. Best score 415 bits
Score difference with first non-orthologous sequence - P.jiroveci:415 T.nigroviridis:342

L0PCT5              	100.00%		H3D2R2              	100.00%
Bootstrap support for L0PCT5 as seed ortholog is 100%.
Bootstrap support for H3D2R2 as seed ortholog is 100%.

Group of orthologs #284. Best score 413 bits
Score difference with first non-orthologous sequence - P.jiroveci:356 T.nigroviridis:413

L0P7M4              	100.00%		H3CJW0              	100.00%
L0PH62              	49.37%		H3D7W5              	82.11%
Bootstrap support for L0P7M4 as seed ortholog is 100%.
Bootstrap support for H3CJW0 as seed ortholog is 100%.

Group of orthologs #285. Best score 413 bits
Score difference with first non-orthologous sequence - P.jiroveci:413 T.nigroviridis:413

L0PG82              	100.00%		H3C0G9              	100.00%
Bootstrap support for L0PG82 as seed ortholog is 100%.
Bootstrap support for H3C0G9 as seed ortholog is 100%.

Group of orthologs #286. Best score 413 bits
Score difference with first non-orthologous sequence - P.jiroveci:231 T.nigroviridis:413

L0P6V9              	100.00%		H3CSB0              	100.00%
Bootstrap support for L0P6V9 as seed ortholog is 100%.
Bootstrap support for H3CSB0 as seed ortholog is 100%.

Group of orthologs #287. Best score 412 bits
Score difference with first non-orthologous sequence - P.jiroveci:412 T.nigroviridis:412

L0PC82              	100.00%		H3CHP0              	100.00%
Bootstrap support for L0PC82 as seed ortholog is 100%.
Bootstrap support for H3CHP0 as seed ortholog is 100%.

Group of orthologs #288. Best score 410 bits
Score difference with first non-orthologous sequence - P.jiroveci:410 T.nigroviridis:410

L0PBL0              	100.00%		H3C550              	100.00%
Bootstrap support for L0PBL0 as seed ortholog is 100%.
Bootstrap support for H3C550 as seed ortholog is 100%.

Group of orthologs #289. Best score 410 bits
Score difference with first non-orthologous sequence - P.jiroveci:410 T.nigroviridis:270

L0PCN1              	100.00%		H3CVR6              	100.00%
Bootstrap support for L0PCN1 as seed ortholog is 100%.
Bootstrap support for H3CVR6 as seed ortholog is 100%.

Group of orthologs #290. Best score 410 bits
Score difference with first non-orthologous sequence - P.jiroveci:410 T.nigroviridis:294

L0PEX5              	100.00%		H3DLD8              	100.00%
Bootstrap support for L0PEX5 as seed ortholog is 100%.
Bootstrap support for H3DLD8 as seed ortholog is 100%.

Group of orthologs #291. Best score 410 bits
Score difference with first non-orthologous sequence - P.jiroveci:410 T.nigroviridis:275

L0PDT0              	100.00%		Q4STM3              	100.00%
Bootstrap support for L0PDT0 as seed ortholog is 100%.
Bootstrap support for Q4STM3 as seed ortholog is 100%.

Group of orthologs #292. Best score 408 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 T.nigroviridis:169

L0PEM1              	100.00%		H3CBD4              	100.00%
Bootstrap support for L0PEM1 as seed ortholog is 100%.
Bootstrap support for H3CBD4 as seed ortholog is 99%.

Group of orthologs #293. Best score 408 bits
Score difference with first non-orthologous sequence - P.jiroveci:408 T.nigroviridis:77

L0PE81              	100.00%		H3CN31              	100.00%
Bootstrap support for L0PE81 as seed ortholog is 100%.
Bootstrap support for H3CN31 as seed ortholog is 98%.

Group of orthologs #294. Best score 408 bits
Score difference with first non-orthologous sequence - P.jiroveci:408 T.nigroviridis:408

L0PED9              	100.00%		H3DKM7              	100.00%
Bootstrap support for L0PED9 as seed ortholog is 100%.
Bootstrap support for H3DKM7 as seed ortholog is 100%.

Group of orthologs #295. Best score 407 bits
Score difference with first non-orthologous sequence - P.jiroveci:407 T.nigroviridis:407

L0PBF6              	100.00%		H3CJG0              	100.00%
                    	       		H3DBG9              	38.57%
Bootstrap support for L0PBF6 as seed ortholog is 100%.
Bootstrap support for H3CJG0 as seed ortholog is 100%.

Group of orthologs #296. Best score 407 bits
Score difference with first non-orthologous sequence - P.jiroveci:407 T.nigroviridis:407

L0P7S7              	100.00%		H3CVX1              	100.00%
Bootstrap support for L0P7S7 as seed ortholog is 100%.
Bootstrap support for H3CVX1 as seed ortholog is 100%.

Group of orthologs #297. Best score 407 bits
Score difference with first non-orthologous sequence - P.jiroveci:407 T.nigroviridis:239

L0PA15              	100.00%		H3D0I8              	100.00%
Bootstrap support for L0PA15 as seed ortholog is 100%.
Bootstrap support for H3D0I8 as seed ortholog is 100%.

Group of orthologs #298. Best score 406 bits
Score difference with first non-orthologous sequence - P.jiroveci:406 T.nigroviridis:406

L0PHJ7              	100.00%		H3DL13              	100.00%
Bootstrap support for L0PHJ7 as seed ortholog is 100%.
Bootstrap support for H3DL13 as seed ortholog is 100%.

Group of orthologs #299. Best score 404 bits
Score difference with first non-orthologous sequence - P.jiroveci:404 T.nigroviridis:404

L0PAN7              	100.00%		H3D0R3              	100.00%
                    	       		H3CKM6              	85.19%
Bootstrap support for L0PAN7 as seed ortholog is 100%.
Bootstrap support for H3D0R3 as seed ortholog is 100%.

Group of orthologs #300. Best score 404 bits
Score difference with first non-orthologous sequence - P.jiroveci:404 T.nigroviridis:271

L0P6U6              	100.00%		H3DID4              	100.00%
Bootstrap support for L0P6U6 as seed ortholog is 100%.
Bootstrap support for H3DID4 as seed ortholog is 100%.

Group of orthologs #301. Best score 403 bits
Score difference with first non-orthologous sequence - P.jiroveci:403 T.nigroviridis:403

L0PBE9              	100.00%		H3CWE6              	100.00%
Bootstrap support for L0PBE9 as seed ortholog is 100%.
Bootstrap support for H3CWE6 as seed ortholog is 100%.

Group of orthologs #302. Best score 402 bits
Score difference with first non-orthologous sequence - P.jiroveci:402 T.nigroviridis:402

L0PDS0              	100.00%		H3CRI2              	100.00%
Bootstrap support for L0PDS0 as seed ortholog is 100%.
Bootstrap support for H3CRI2 as seed ortholog is 100%.

Group of orthologs #303. Best score 401 bits
Score difference with first non-orthologous sequence - P.jiroveci:401 T.nigroviridis:401

L0PB82              	100.00%		H3DDE2              	100.00%
Bootstrap support for L0PB82 as seed ortholog is 100%.
Bootstrap support for H3DDE2 as seed ortholog is 100%.

Group of orthologs #304. Best score 400 bits
Score difference with first non-orthologous sequence - P.jiroveci:400 T.nigroviridis:400

L0P8Z3              	100.00%		H3CQJ5              	100.00%
Bootstrap support for L0P8Z3 as seed ortholog is 100%.
Bootstrap support for H3CQJ5 as seed ortholog is 100%.

Group of orthologs #305. Best score 398 bits
Score difference with first non-orthologous sequence - P.jiroveci:398 T.nigroviridis:398

L0P971              	100.00%		H3DRF2              	100.00%
Bootstrap support for L0P971 as seed ortholog is 100%.
Bootstrap support for H3DRF2 as seed ortholog is 100%.

Group of orthologs #306. Best score 397 bits
Score difference with first non-orthologous sequence - P.jiroveci:231 T.nigroviridis:92

L0P9Z0              	100.00%		H3D1Z5              	100.00%
                    	       		H3DD22              	57.54%
Bootstrap support for L0P9Z0 as seed ortholog is 100%.
Bootstrap support for H3D1Z5 as seed ortholog is 99%.

Group of orthologs #307. Best score 397 bits
Score difference with first non-orthologous sequence - P.jiroveci:397 T.nigroviridis:74

L0PCT6              	100.00%		H3CJV4              	100.00%
Bootstrap support for L0PCT6 as seed ortholog is 100%.
Bootstrap support for H3CJV4 as seed ortholog is 96%.

Group of orthologs #308. Best score 397 bits
Score difference with first non-orthologous sequence - P.jiroveci:397 T.nigroviridis:397

L0PEY9              	100.00%		Q4SFK8              	100.00%
Bootstrap support for L0PEY9 as seed ortholog is 100%.
Bootstrap support for Q4SFK8 as seed ortholog is 100%.

Group of orthologs #309. Best score 396 bits
Score difference with first non-orthologous sequence - P.jiroveci:396 T.nigroviridis:396

L0PCQ7              	100.00%		H3D0S7              	100.00%
Bootstrap support for L0PCQ7 as seed ortholog is 100%.
Bootstrap support for H3D0S7 as seed ortholog is 100%.

Group of orthologs #310. Best score 394 bits
Score difference with first non-orthologous sequence - P.jiroveci:394 T.nigroviridis:218

L0PG48              	100.00%		H3D4X5              	100.00%
Bootstrap support for L0PG48 as seed ortholog is 100%.
Bootstrap support for H3D4X5 as seed ortholog is 100%.

Group of orthologs #311. Best score 393 bits
Score difference with first non-orthologous sequence - P.jiroveci:393 T.nigroviridis:393

L0PEE4              	100.00%		H3DL71              	100.00%
                    	       		H3DJQ0              	44.14%
                    	       		H3CQY9              	36.97%
Bootstrap support for L0PEE4 as seed ortholog is 100%.
Bootstrap support for H3DL71 as seed ortholog is 100%.

Group of orthologs #312. Best score 393 bits
Score difference with first non-orthologous sequence - P.jiroveci:393 T.nigroviridis:393

L0PAM5              	100.00%		H3DEA5              	100.00%
Bootstrap support for L0PAM5 as seed ortholog is 100%.
Bootstrap support for H3DEA5 as seed ortholog is 100%.

Group of orthologs #313. Best score 393 bits
Score difference with first non-orthologous sequence - P.jiroveci:393 T.nigroviridis:393

L0P9B4              	100.00%		H3DGQ2              	100.00%
Bootstrap support for L0P9B4 as seed ortholog is 100%.
Bootstrap support for H3DGQ2 as seed ortholog is 100%.

Group of orthologs #314. Best score 392 bits
Score difference with first non-orthologous sequence - P.jiroveci:392 T.nigroviridis:272

L0P942              	100.00%		H3CS56              	100.00%
L0P7J6              	58.01%		H3DJP3              	7.77%
Bootstrap support for L0P942 as seed ortholog is 100%.
Bootstrap support for H3CS56 as seed ortholog is 100%.

Group of orthologs #315. Best score 392 bits
Score difference with first non-orthologous sequence - P.jiroveci:392 T.nigroviridis:132

L0PCP3              	100.00%		H3CXA9              	100.00%
Bootstrap support for L0PCP3 as seed ortholog is 100%.
Bootstrap support for H3CXA9 as seed ortholog is 99%.

Group of orthologs #316. Best score 392 bits
Score difference with first non-orthologous sequence - P.jiroveci:392 T.nigroviridis:392

L0PI13              	100.00%		H3DCP9              	100.00%
Bootstrap support for L0PI13 as seed ortholog is 100%.
Bootstrap support for H3DCP9 as seed ortholog is 100%.

Group of orthologs #317. Best score 391 bits
Score difference with first non-orthologous sequence - P.jiroveci:391 T.nigroviridis:391

L0PB68              	100.00%		Q4SM08              	100.00%
Bootstrap support for L0PB68 as seed ortholog is 100%.
Bootstrap support for Q4SM08 as seed ortholog is 100%.

Group of orthologs #318. Best score 390 bits
Score difference with first non-orthologous sequence - P.jiroveci:390 T.nigroviridis:390

L0PB32              	100.00%		H3CX21              	100.00%
                    	       		H3DJX0              	39.82%
Bootstrap support for L0PB32 as seed ortholog is 100%.
Bootstrap support for H3CX21 as seed ortholog is 100%.

Group of orthologs #319. Best score 390 bits
Score difference with first non-orthologous sequence - P.jiroveci:390 T.nigroviridis:107

L0PFD9              	100.00%		H3BYM5              	100.00%
Bootstrap support for L0PFD9 as seed ortholog is 100%.
Bootstrap support for H3BYM5 as seed ortholog is 99%.

Group of orthologs #320. Best score 389 bits
Score difference with first non-orthologous sequence - P.jiroveci:121 T.nigroviridis:240

L0PBY8              	100.00%		H3CL71              	100.00%
                    	       		H3DJF8              	51.80%
Bootstrap support for L0PBY8 as seed ortholog is 99%.
Bootstrap support for H3CL71 as seed ortholog is 100%.

Group of orthologs #321. Best score 389 bits
Score difference with first non-orthologous sequence - P.jiroveci:389 T.nigroviridis:174

L0P702              	100.00%		H3C225              	100.00%
Bootstrap support for L0P702 as seed ortholog is 100%.
Bootstrap support for H3C225 as seed ortholog is 100%.

Group of orthologs #322. Best score 389 bits
Score difference with first non-orthologous sequence - P.jiroveci:389 T.nigroviridis:389

L0PCV8              	100.00%		H3BVT8              	100.00%
Bootstrap support for L0PCV8 as seed ortholog is 100%.
Bootstrap support for H3BVT8 as seed ortholog is 100%.

Group of orthologs #323. Best score 389 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 T.nigroviridis:7

L0PAY3              	100.00%		H3CBY3              	100.00%
Bootstrap support for L0PAY3 as seed ortholog is 99%.
Bootstrap support for H3CBY3 as seed ortholog is 56%.
Alternative seed ortholog is H3DLL8 (7 bits away from this cluster)

Group of orthologs #324. Best score 388 bits
Score difference with first non-orthologous sequence - P.jiroveci:388 T.nigroviridis:304

L0PFP2              	100.00%		H3D5W7              	100.00%
Bootstrap support for L0PFP2 as seed ortholog is 100%.
Bootstrap support for H3D5W7 as seed ortholog is 100%.

Group of orthologs #325. Best score 387 bits
Score difference with first non-orthologous sequence - P.jiroveci:387 T.nigroviridis:172

L0P9R8              	100.00%		H3CEJ5              	100.00%
Bootstrap support for L0P9R8 as seed ortholog is 100%.
Bootstrap support for H3CEJ5 as seed ortholog is 99%.

Group of orthologs #326. Best score 386 bits
Score difference with first non-orthologous sequence - P.jiroveci:386 T.nigroviridis:124

L0PA26              	100.00%		H3CZY6              	100.00%
Bootstrap support for L0PA26 as seed ortholog is 100%.
Bootstrap support for H3CZY6 as seed ortholog is 99%.

Group of orthologs #327. Best score 384 bits
Score difference with first non-orthologous sequence - P.jiroveci:384 T.nigroviridis:384

L0PG01              	100.00%		H3C306              	100.00%
L0P7J0              	81.70%		
Bootstrap support for L0PG01 as seed ortholog is 100%.
Bootstrap support for H3C306 as seed ortholog is 100%.

Group of orthologs #328. Best score 384 bits
Score difference with first non-orthologous sequence - P.jiroveci:384 T.nigroviridis:278

L0PA88              	100.00%		H3DE80              	100.00%
Bootstrap support for L0PA88 as seed ortholog is 100%.
Bootstrap support for H3DE80 as seed ortholog is 100%.

Group of orthologs #329. Best score 383 bits
Score difference with first non-orthologous sequence - P.jiroveci:383 T.nigroviridis:44

L0P9Y8              	100.00%		H3CI25              	100.00%
Bootstrap support for L0P9Y8 as seed ortholog is 100%.
Bootstrap support for H3CI25 as seed ortholog is 82%.

Group of orthologs #330. Best score 383 bits
Score difference with first non-orthologous sequence - P.jiroveci:383 T.nigroviridis:383

L0PAE9              	100.00%		H3CZ34              	100.00%
Bootstrap support for L0PAE9 as seed ortholog is 100%.
Bootstrap support for H3CZ34 as seed ortholog is 100%.

Group of orthologs #331. Best score 383 bits
Score difference with first non-orthologous sequence - P.jiroveci:280 T.nigroviridis:275

L0PA57              	100.00%		Q4S349              	100.00%
Bootstrap support for L0PA57 as seed ortholog is 100%.
Bootstrap support for Q4S349 as seed ortholog is 100%.

Group of orthologs #332. Best score 382 bits
Score difference with first non-orthologous sequence - P.jiroveci:284 T.nigroviridis:263

L0P7Z7              	100.00%		Q4RJN5              	100.00%
                    	       		H3BXK8              	90.19%
Bootstrap support for L0P7Z7 as seed ortholog is 100%.
Bootstrap support for Q4RJN5 as seed ortholog is 100%.

Group of orthologs #333. Best score 380 bits
Score difference with first non-orthologous sequence - P.jiroveci:380 T.nigroviridis:380

L0PCR5              	100.00%		H3DLY1              	100.00%
L0P9C2              	56.21%		H3DBV6              	40.34%
Bootstrap support for L0PCR5 as seed ortholog is 100%.
Bootstrap support for H3DLY1 as seed ortholog is 100%.

Group of orthologs #334. Best score 380 bits
Score difference with first non-orthologous sequence - P.jiroveci:380 T.nigroviridis:380

L0PE52              	100.00%		H3CJ79              	100.00%
L0PIN5              	49.94%		
Bootstrap support for L0PE52 as seed ortholog is 100%.
Bootstrap support for H3CJ79 as seed ortholog is 100%.

Group of orthologs #335. Best score 380 bits
Score difference with first non-orthologous sequence - P.jiroveci:380 T.nigroviridis:380

L0P7L7              	100.00%		H3C7X4              	100.00%
Bootstrap support for L0P7L7 as seed ortholog is 100%.
Bootstrap support for H3C7X4 as seed ortholog is 100%.

Group of orthologs #336. Best score 380 bits
Score difference with first non-orthologous sequence - P.jiroveci:100 T.nigroviridis:59

L0PFY3              	100.00%		H3D2F6              	100.00%
Bootstrap support for L0PFY3 as seed ortholog is 98%.
Bootstrap support for H3D2F6 as seed ortholog is 76%.

Group of orthologs #337. Best score 380 bits
Score difference with first non-orthologous sequence - P.jiroveci:380 T.nigroviridis:263

L0PBI2              	100.00%		H3DN92              	100.00%
Bootstrap support for L0PBI2 as seed ortholog is 100%.
Bootstrap support for H3DN92 as seed ortholog is 100%.

Group of orthologs #338. Best score 379 bits
Score difference with first non-orthologous sequence - P.jiroveci:183 T.nigroviridis:379

L0PBH6              	100.00%		H3CNR4              	100.00%
                    	       		H3CMZ3              	49.09%
                    	       		H3C1J7              	44.63%
                    	       		H3D4W5              	36.53%
Bootstrap support for L0PBH6 as seed ortholog is 100%.
Bootstrap support for H3CNR4 as seed ortholog is 100%.

Group of orthologs #339. Best score 379 bits
Score difference with first non-orthologous sequence - P.jiroveci:379 T.nigroviridis:379

L0PCH8              	100.00%		H3BX07              	100.00%
Bootstrap support for L0PCH8 as seed ortholog is 100%.
Bootstrap support for H3BX07 as seed ortholog is 100%.

Group of orthologs #340. Best score 379 bits
Score difference with first non-orthologous sequence - P.jiroveci:379 T.nigroviridis:379

L0PID0              	100.00%		H3CI86              	100.00%
Bootstrap support for L0PID0 as seed ortholog is 100%.
Bootstrap support for H3CI86 as seed ortholog is 100%.

Group of orthologs #341. Best score 379 bits
Score difference with first non-orthologous sequence - P.jiroveci:379 T.nigroviridis:379

L0PAU1              	100.00%		Q4TDL9              	100.00%
Bootstrap support for L0PAU1 as seed ortholog is 100%.
Bootstrap support for Q4TDL9 as seed ortholog is 100%.

Group of orthologs #342. Best score 378 bits
Score difference with first non-orthologous sequence - P.jiroveci:378 T.nigroviridis:378

L0PA23              	100.00%		H3CYS0              	100.00%
Bootstrap support for L0PA23 as seed ortholog is 100%.
Bootstrap support for H3CYS0 as seed ortholog is 100%.

Group of orthologs #343. Best score 378 bits
Score difference with first non-orthologous sequence - P.jiroveci:378 T.nigroviridis:378

L0PFQ8              	100.00%		Q4S9B4              	100.00%
Bootstrap support for L0PFQ8 as seed ortholog is 100%.
Bootstrap support for Q4S9B4 as seed ortholog is 100%.

Group of orthologs #344. Best score 377 bits
Score difference with first non-orthologous sequence - P.jiroveci:377 T.nigroviridis:377

L0P8A6              	100.00%		H3C5A9              	100.00%
Bootstrap support for L0P8A6 as seed ortholog is 100%.
Bootstrap support for H3C5A9 as seed ortholog is 100%.

Group of orthologs #345. Best score 377 bits
Score difference with first non-orthologous sequence - P.jiroveci:377 T.nigroviridis:177

L0PGJ5              	100.00%		H3D5R7              	100.00%
Bootstrap support for L0PGJ5 as seed ortholog is 100%.
Bootstrap support for H3D5R7 as seed ortholog is 99%.

Group of orthologs #346. Best score 376 bits
Score difference with first non-orthologous sequence - P.jiroveci:376 T.nigroviridis:376

L0PDQ3              	100.00%		Q4RPP8              	100.00%
                    	       		H3CFQ4              	61.11%
Bootstrap support for L0PDQ3 as seed ortholog is 100%.
Bootstrap support for Q4RPP8 as seed ortholog is 100%.

Group of orthologs #347. Best score 374 bits
Score difference with first non-orthologous sequence - P.jiroveci:374 T.nigroviridis:190

L0PE19              	100.00%		H3DBW1              	100.00%
Bootstrap support for L0PE19 as seed ortholog is 100%.
Bootstrap support for H3DBW1 as seed ortholog is 100%.

Group of orthologs #348. Best score 373 bits
Score difference with first non-orthologous sequence - P.jiroveci:22 T.nigroviridis:95

L0PCW4              	100.00%		H3D8Z9              	100.00%
                    	       		H3CQY4              	37.68%
                    	       		H3D0Z2              	35.47%
Bootstrap support for L0PCW4 as seed ortholog is 77%.
Bootstrap support for H3D8Z9 as seed ortholog is 99%.

Group of orthologs #349. Best score 373 bits
Score difference with first non-orthologous sequence - P.jiroveci:8 T.nigroviridis:160

L0PF21              	100.00%		H3CAP7              	100.00%
Bootstrap support for L0PF21 as seed ortholog is 57%.
Alternative seed ortholog is L0P6T3 (8 bits away from this cluster)
Bootstrap support for H3CAP7 as seed ortholog is 99%.

Group of orthologs #350. Best score 373 bits
Score difference with first non-orthologous sequence - P.jiroveci:373 T.nigroviridis:306

L0P7T8              	100.00%		H3D0K3              	100.00%
Bootstrap support for L0P7T8 as seed ortholog is 100%.
Bootstrap support for H3D0K3 as seed ortholog is 100%.

Group of orthologs #351. Best score 373 bits
Score difference with first non-orthologous sequence - P.jiroveci:373 T.nigroviridis:266

L0P7P4              	100.00%		Q4SG11              	100.00%
Bootstrap support for L0P7P4 as seed ortholog is 100%.
Bootstrap support for Q4SG11 as seed ortholog is 100%.

Group of orthologs #352. Best score 372 bits
Score difference with first non-orthologous sequence - P.jiroveci:372 T.nigroviridis:372

L0P9G7              	100.00%		H3DAR1              	100.00%
                    	       		H3CDE6              	49.44%
Bootstrap support for L0P9G7 as seed ortholog is 100%.
Bootstrap support for H3DAR1 as seed ortholog is 100%.

Group of orthologs #353. Best score 372 bits
Score difference with first non-orthologous sequence - P.jiroveci:372 T.nigroviridis:372

L0PDI1              	100.00%		H3CSY0              	100.00%
Bootstrap support for L0PDI1 as seed ortholog is 100%.
Bootstrap support for H3CSY0 as seed ortholog is 100%.

Group of orthologs #354. Best score 371 bits
Score difference with first non-orthologous sequence - P.jiroveci:371 T.nigroviridis:371

L0P9K9              	100.00%		H3CGR2              	100.00%
Bootstrap support for L0P9K9 as seed ortholog is 100%.
Bootstrap support for H3CGR2 as seed ortholog is 100%.

Group of orthologs #355. Best score 371 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 T.nigroviridis:371

L0PD82              	100.00%		H3DJE4              	100.00%
Bootstrap support for L0PD82 as seed ortholog is 100%.
Bootstrap support for H3DJE4 as seed ortholog is 100%.

Group of orthologs #356. Best score 369 bits
Score difference with first non-orthologous sequence - P.jiroveci:369 T.nigroviridis:369

L0P9J7              	100.00%		H3CCA8              	100.00%
Bootstrap support for L0P9J7 as seed ortholog is 100%.
Bootstrap support for H3CCA8 as seed ortholog is 100%.

Group of orthologs #357. Best score 369 bits
Score difference with first non-orthologous sequence - P.jiroveci:369 T.nigroviridis:369

L0PC90              	100.00%		H3CB85              	100.00%
Bootstrap support for L0PC90 as seed ortholog is 100%.
Bootstrap support for H3CB85 as seed ortholog is 100%.

Group of orthologs #358. Best score 366 bits
Score difference with first non-orthologous sequence - P.jiroveci:366 T.nigroviridis:86

L0P7X9              	100.00%		H3DGF4              	100.00%
L0PBE2              	80.81%		H3D6X4              	39.12%
Bootstrap support for L0P7X9 as seed ortholog is 100%.
Bootstrap support for H3DGF4 as seed ortholog is 93%.

Group of orthologs #359. Best score 366 bits
Score difference with first non-orthologous sequence - P.jiroveci:366 T.nigroviridis:366

L0PGF5              	100.00%		H3DAI3              	100.00%
Bootstrap support for L0PGF5 as seed ortholog is 100%.
Bootstrap support for H3DAI3 as seed ortholog is 100%.

Group of orthologs #360. Best score 366 bits
Score difference with first non-orthologous sequence - P.jiroveci:366 T.nigroviridis:366

L0P9B6              	100.00%		Q4RHG7              	100.00%
Bootstrap support for L0P9B6 as seed ortholog is 100%.
Bootstrap support for Q4RHG7 as seed ortholog is 100%.

Group of orthologs #361. Best score 365 bits
Score difference with first non-orthologous sequence - P.jiroveci:365 T.nigroviridis:263

L0PH29              	100.00%		H3CW13              	100.00%
                    	       		H3DMX8              	100.00%
Bootstrap support for L0PH29 as seed ortholog is 100%.
Bootstrap support for H3CW13 as seed ortholog is 100%.
Bootstrap support for H3DMX8 as seed ortholog is 100%.

Group of orthologs #362. Best score 364 bits
Score difference with first non-orthologous sequence - P.jiroveci:364 T.nigroviridis:364

L0P9X7              	100.00%		H3D9Y4              	100.00%
Bootstrap support for L0P9X7 as seed ortholog is 100%.
Bootstrap support for H3D9Y4 as seed ortholog is 100%.

Group of orthologs #363. Best score 364 bits
Score difference with first non-orthologous sequence - P.jiroveci:364 T.nigroviridis:364

L0PAI0              	100.00%		H3DCC8              	100.00%
Bootstrap support for L0PAI0 as seed ortholog is 100%.
Bootstrap support for H3DCC8 as seed ortholog is 100%.

Group of orthologs #364. Best score 364 bits
Score difference with first non-orthologous sequence - P.jiroveci:364 T.nigroviridis:98

L0PCE9              	100.00%		H3DCU8              	100.00%
Bootstrap support for L0PCE9 as seed ortholog is 100%.
Bootstrap support for H3DCU8 as seed ortholog is 97%.

Group of orthologs #365. Best score 363 bits
Score difference with first non-orthologous sequence - P.jiroveci:363 T.nigroviridis:302

L0PEX9              	100.00%		Q4SW80              	100.00%
                    	       		H3CS86              	43.14%
Bootstrap support for L0PEX9 as seed ortholog is 100%.
Bootstrap support for Q4SW80 as seed ortholog is 100%.

Group of orthologs #366. Best score 363 bits
Score difference with first non-orthologous sequence - P.jiroveci:363 T.nigroviridis:297

L0PBQ1              	100.00%		H3CHW8              	100.00%
Bootstrap support for L0PBQ1 as seed ortholog is 100%.
Bootstrap support for H3CHW8 as seed ortholog is 100%.

Group of orthologs #367. Best score 361 bits
Score difference with first non-orthologous sequence - P.jiroveci:361 T.nigroviridis:361

L0PBC5              	100.00%		H3DN72              	100.00%
Bootstrap support for L0PBC5 as seed ortholog is 100%.
Bootstrap support for H3DN72 as seed ortholog is 100%.

Group of orthologs #368. Best score 360 bits
Score difference with first non-orthologous sequence - P.jiroveci:360 T.nigroviridis:360

L0PBA8              	100.00%		H3CUP7              	100.00%
                    	       		Q4TBL7              	16.80%
Bootstrap support for L0PBA8 as seed ortholog is 100%.
Bootstrap support for H3CUP7 as seed ortholog is 100%.

Group of orthologs #369. Best score 360 bits
Score difference with first non-orthologous sequence - P.jiroveci:360 T.nigroviridis:360

L0P9U8              	100.00%		H3BZP9              	100.00%
Bootstrap support for L0P9U8 as seed ortholog is 100%.
Bootstrap support for H3BZP9 as seed ortholog is 100%.

Group of orthologs #370. Best score 359 bits
Score difference with first non-orthologous sequence - P.jiroveci:359 T.nigroviridis:359

L0PES3              	100.00%		H3CU36              	100.00%
Bootstrap support for L0PES3 as seed ortholog is 100%.
Bootstrap support for H3CU36 as seed ortholog is 100%.

Group of orthologs #371. Best score 358 bits
Score difference with first non-orthologous sequence - P.jiroveci:358 T.nigroviridis:358

L0PBA9              	100.00%		H3CRT8              	100.00%
                    	       		H3CSX8              	16.90%
Bootstrap support for L0PBA9 as seed ortholog is 100%.
Bootstrap support for H3CRT8 as seed ortholog is 100%.

Group of orthologs #372. Best score 358 bits
Score difference with first non-orthologous sequence - P.jiroveci:358 T.nigroviridis:358

L0PD02              	100.00%		H3DAZ4              	100.00%
                    	       		Q4SCA9              	62.66%
Bootstrap support for L0PD02 as seed ortholog is 100%.
Bootstrap support for H3DAZ4 as seed ortholog is 100%.

Group of orthologs #373. Best score 357 bits
Score difference with first non-orthologous sequence - P.jiroveci:357 T.nigroviridis:130

L0PBU4              	100.00%		H3D375              	100.00%
                    	       		H3CAJ8              	45.34%
                    	       		H3CTN4              	44.04%
Bootstrap support for L0PBU4 as seed ortholog is 100%.
Bootstrap support for H3D375 as seed ortholog is 99%.

Group of orthologs #374. Best score 357 bits
Score difference with first non-orthologous sequence - P.jiroveci:357 T.nigroviridis:292

L0PIR9              	100.00%		Q4SY05              	100.00%
Bootstrap support for L0PIR9 as seed ortholog is 100%.
Bootstrap support for Q4SY05 as seed ortholog is 100%.

Group of orthologs #375. Best score 356 bits
Score difference with first non-orthologous sequence - P.jiroveci:43 T.nigroviridis:356

L0P8U1              	100.00%		H3C9V1              	100.00%
Bootstrap support for L0P8U1 as seed ortholog is 75%.
Bootstrap support for H3C9V1 as seed ortholog is 100%.

Group of orthologs #376. Best score 354 bits
Score difference with first non-orthologous sequence - P.jiroveci:354 T.nigroviridis:354

L0PFP6              	100.00%		H3CAJ2              	100.00%
Bootstrap support for L0PFP6 as seed ortholog is 100%.
Bootstrap support for H3CAJ2 as seed ortholog is 100%.

Group of orthologs #377. Best score 354 bits
Score difference with first non-orthologous sequence - P.jiroveci:354 T.nigroviridis:273

L0P8X3              	100.00%		H3CW04              	100.00%
Bootstrap support for L0P8X3 as seed ortholog is 100%.
Bootstrap support for H3CW04 as seed ortholog is 99%.

Group of orthologs #378. Best score 352 bits
Score difference with first non-orthologous sequence - P.jiroveci:222 T.nigroviridis:352

L0PAW2              	100.00%		H3CXP0              	100.00%
Bootstrap support for L0PAW2 as seed ortholog is 100%.
Bootstrap support for H3CXP0 as seed ortholog is 100%.

Group of orthologs #379. Best score 352 bits
Score difference with first non-orthologous sequence - P.jiroveci:352 T.nigroviridis:201

L0PCW8              	100.00%		H3DG60              	100.00%
Bootstrap support for L0PCW8 as seed ortholog is 100%.
Bootstrap support for H3DG60 as seed ortholog is 99%.

Group of orthologs #380. Best score 351 bits
Score difference with first non-orthologous sequence - P.jiroveci:294 T.nigroviridis:228

L0PG24              	100.00%		H3DQZ0              	100.00%
Bootstrap support for L0PG24 as seed ortholog is 100%.
Bootstrap support for H3DQZ0 as seed ortholog is 100%.

Group of orthologs #381. Best score 348 bits
Score difference with first non-orthologous sequence - P.jiroveci:348 T.nigroviridis:294

L0P8G8              	100.00%		H3DD91              	100.00%
Bootstrap support for L0P8G8 as seed ortholog is 100%.
Bootstrap support for H3DD91 as seed ortholog is 100%.

Group of orthologs #382. Best score 347 bits
Score difference with first non-orthologous sequence - P.jiroveci:347 T.nigroviridis:148

L0PB24              	100.00%		H3CTP8              	100.00%
Bootstrap support for L0PB24 as seed ortholog is 100%.
Bootstrap support for H3CTP8 as seed ortholog is 99%.

Group of orthologs #383. Best score 347 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 T.nigroviridis:105

L0PF10              	100.00%		H3DD82              	100.00%
Bootstrap support for L0PF10 as seed ortholog is 100%.
Bootstrap support for H3DD82 as seed ortholog is 99%.

Group of orthologs #384. Best score 346 bits
Score difference with first non-orthologous sequence - P.jiroveci:346 T.nigroviridis:250

L0P9D3              	100.00%		H3D5L2              	100.00%
L0P7B2              	51.66%		
Bootstrap support for L0P9D3 as seed ortholog is 100%.
Bootstrap support for H3D5L2 as seed ortholog is 100%.

Group of orthologs #385. Best score 346 bits
Score difference with first non-orthologous sequence - P.jiroveci:346 T.nigroviridis:346

L0PB97              	100.00%		H3CCT7              	100.00%
Bootstrap support for L0PB97 as seed ortholog is 100%.
Bootstrap support for H3CCT7 as seed ortholog is 100%.

Group of orthologs #386. Best score 346 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 T.nigroviridis:346

L0PA13              	100.00%		H3CP62              	100.00%
Bootstrap support for L0PA13 as seed ortholog is 88%.
Bootstrap support for H3CP62 as seed ortholog is 100%.

Group of orthologs #387. Best score 345 bits
Score difference with first non-orthologous sequence - P.jiroveci:256 T.nigroviridis:345

L0P8W4              	100.00%		H3CCB5              	100.00%
Bootstrap support for L0P8W4 as seed ortholog is 100%.
Bootstrap support for H3CCB5 as seed ortholog is 100%.

Group of orthologs #388. Best score 345 bits
Score difference with first non-orthologous sequence - P.jiroveci:345 T.nigroviridis:345

L0PE98              	100.00%		H3DI97              	100.00%
Bootstrap support for L0PE98 as seed ortholog is 100%.
Bootstrap support for H3DI97 as seed ortholog is 100%.

Group of orthologs #389. Best score 344 bits
Score difference with first non-orthologous sequence - P.jiroveci:344 T.nigroviridis:344

L0P7R5              	100.00%		H3CJT9              	100.00%
Bootstrap support for L0P7R5 as seed ortholog is 100%.
Bootstrap support for H3CJT9 as seed ortholog is 100%.

Group of orthologs #390. Best score 344 bits
Score difference with first non-orthologous sequence - P.jiroveci:344 T.nigroviridis:192

L0PBP4              	100.00%		H3D3V6              	100.00%
Bootstrap support for L0PBP4 as seed ortholog is 100%.
Bootstrap support for H3D3V6 as seed ortholog is 99%.

Group of orthologs #391. Best score 344 bits
Score difference with first non-orthologous sequence - P.jiroveci:344 T.nigroviridis:344

L0PF30              	100.00%		H3D8F5              	100.00%
Bootstrap support for L0PF30 as seed ortholog is 100%.
Bootstrap support for H3D8F5 as seed ortholog is 100%.

Group of orthologs #392. Best score 344 bits
Score difference with first non-orthologous sequence - P.jiroveci:344 T.nigroviridis:344

L0P8T4              	100.00%		H3DQ44              	100.00%
Bootstrap support for L0P8T4 as seed ortholog is 100%.
Bootstrap support for H3DQ44 as seed ortholog is 100%.

Group of orthologs #393. Best score 343 bits
Score difference with first non-orthologous sequence - P.jiroveci:343 T.nigroviridis:263

L0PBQ9              	100.00%		H3CA52              	100.00%
Bootstrap support for L0PBQ9 as seed ortholog is 100%.
Bootstrap support for H3CA52 as seed ortholog is 100%.

Group of orthologs #394. Best score 343 bits
Score difference with first non-orthologous sequence - P.jiroveci:343 T.nigroviridis:236

L0PDF2              	100.00%		H3CAA7              	100.00%
Bootstrap support for L0PDF2 as seed ortholog is 100%.
Bootstrap support for H3CAA7 as seed ortholog is 100%.

Group of orthologs #395. Best score 342 bits
Score difference with first non-orthologous sequence - P.jiroveci:342 T.nigroviridis:342

L0PAB3              	100.00%		H3C9W1              	100.00%
Bootstrap support for L0PAB3 as seed ortholog is 100%.
Bootstrap support for H3C9W1 as seed ortholog is 100%.

Group of orthologs #396. Best score 342 bits
Score difference with first non-orthologous sequence - P.jiroveci:342 T.nigroviridis:342

L0PB18              	100.00%		H3CJE1              	100.00%
Bootstrap support for L0PB18 as seed ortholog is 100%.
Bootstrap support for H3CJE1 as seed ortholog is 100%.

Group of orthologs #397. Best score 342 bits
Score difference with first non-orthologous sequence - P.jiroveci:174 T.nigroviridis:161

L0PAY5              	100.00%		H3CXV2              	100.00%
Bootstrap support for L0PAY5 as seed ortholog is 100%.
Bootstrap support for H3CXV2 as seed ortholog is 99%.

Group of orthologs #398. Best score 342 bits
Score difference with first non-orthologous sequence - P.jiroveci:342 T.nigroviridis:238

L0PB23              	100.00%		H3DAI7              	100.00%
Bootstrap support for L0PB23 as seed ortholog is 100%.
Bootstrap support for H3DAI7 as seed ortholog is 99%.

Group of orthologs #399. Best score 341 bits
Score difference with first non-orthologous sequence - P.jiroveci:341 T.nigroviridis:341

L0PAC7              	100.00%		H3CDN4              	100.00%
Bootstrap support for L0PAC7 as seed ortholog is 100%.
Bootstrap support for H3CDN4 as seed ortholog is 100%.

Group of orthologs #400. Best score 341 bits
Score difference with first non-orthologous sequence - P.jiroveci:238 T.nigroviridis:258

L0PDV0              	100.00%		H3CAY7              	100.00%
Bootstrap support for L0PDV0 as seed ortholog is 100%.
Bootstrap support for H3CAY7 as seed ortholog is 100%.

Group of orthologs #401. Best score 340 bits
Score difference with first non-orthologous sequence - P.jiroveci:340 T.nigroviridis:165

L0PEF1              	100.00%		H3D5L6              	100.00%
Bootstrap support for L0PEF1 as seed ortholog is 100%.
Bootstrap support for H3D5L6 as seed ortholog is 99%.

Group of orthologs #402. Best score 339 bits
Score difference with first non-orthologous sequence - P.jiroveci:339 T.nigroviridis:339

L0P9S4              	100.00%		H3D152              	100.00%
Bootstrap support for L0P9S4 as seed ortholog is 100%.
Bootstrap support for H3D152 as seed ortholog is 100%.

Group of orthologs #403. Best score 339 bits
Score difference with first non-orthologous sequence - P.jiroveci:339 T.nigroviridis:339

L0PD99              	100.00%		H3DDL7              	100.00%
Bootstrap support for L0PD99 as seed ortholog is 100%.
Bootstrap support for H3DDL7 as seed ortholog is 100%.

Group of orthologs #404. Best score 339 bits
Score difference with first non-orthologous sequence - P.jiroveci:339 T.nigroviridis:168

L0PEG2              	100.00%		H3DEW1              	100.00%
Bootstrap support for L0PEG2 as seed ortholog is 100%.
Bootstrap support for H3DEW1 as seed ortholog is 99%.

Group of orthologs #405. Best score 339 bits
Score difference with first non-orthologous sequence - P.jiroveci:339 T.nigroviridis:339

L0P8J2              	100.00%		Q4RG23              	100.00%
Bootstrap support for L0P8J2 as seed ortholog is 100%.
Bootstrap support for Q4RG23 as seed ortholog is 100%.

Group of orthologs #406. Best score 338 bits
Score difference with first non-orthologous sequence - P.jiroveci:338 T.nigroviridis:256

L0PGL1              	100.00%		H3CVK0              	100.00%
Bootstrap support for L0PGL1 as seed ortholog is 100%.
Bootstrap support for H3CVK0 as seed ortholog is 100%.

Group of orthologs #407. Best score 337 bits
Score difference with first non-orthologous sequence - P.jiroveci:337 T.nigroviridis:337

L0PBX2              	100.00%		H3CP06              	100.00%
Bootstrap support for L0PBX2 as seed ortholog is 100%.
Bootstrap support for H3CP06 as seed ortholog is 100%.

Group of orthologs #408. Best score 337 bits
Score difference with first non-orthologous sequence - P.jiroveci:337 T.nigroviridis:337

L0P8R5              	100.00%		Q4T4X5              	100.00%
Bootstrap support for L0P8R5 as seed ortholog is 100%.
Bootstrap support for Q4T4X5 as seed ortholog is 100%.

Group of orthologs #409. Best score 336 bits
Score difference with first non-orthologous sequence - P.jiroveci:336 T.nigroviridis:294

L0PCQ8              	100.00%		H3D0K2              	100.00%
                    	       		H3DCA0              	7.66%
Bootstrap support for L0PCQ8 as seed ortholog is 100%.
Bootstrap support for H3D0K2 as seed ortholog is 100%.

Group of orthologs #410. Best score 335 bits
Score difference with first non-orthologous sequence - P.jiroveci:335 T.nigroviridis:335

L0PB54              	100.00%		H3D1I5              	100.00%
                    	       		H3DD37              	53.12%
Bootstrap support for L0PB54 as seed ortholog is 100%.
Bootstrap support for H3D1I5 as seed ortholog is 100%.

Group of orthologs #411. Best score 335 bits
Score difference with first non-orthologous sequence - P.jiroveci:335 T.nigroviridis:335

L0P8N0              	100.00%		H3D087              	100.00%
Bootstrap support for L0P8N0 as seed ortholog is 100%.
Bootstrap support for H3D087 as seed ortholog is 100%.

Group of orthologs #412. Best score 335 bits
Score difference with first non-orthologous sequence - P.jiroveci:335 T.nigroviridis:335

L0P8R8              	100.00%		H3D0V1              	100.00%
Bootstrap support for L0P8R8 as seed ortholog is 100%.
Bootstrap support for H3D0V1 as seed ortholog is 100%.

Group of orthologs #413. Best score 334 bits
Score difference with first non-orthologous sequence - P.jiroveci:334 T.nigroviridis:235

L0PBY3              	100.00%		H3DA13              	100.00%
                    	       		H3D044              	46.17%
Bootstrap support for L0PBY3 as seed ortholog is 100%.
Bootstrap support for H3DA13 as seed ortholog is 100%.

Group of orthologs #414. Best score 333 bits
Score difference with first non-orthologous sequence - P.jiroveci:333 T.nigroviridis:333

L0PAL9              	100.00%		Q4S6U8              	100.00%
L0PBY7              	40.93%		H3D423              	97.46%
                    	       		H3CPT6              	56.43%
Bootstrap support for L0PAL9 as seed ortholog is 100%.
Bootstrap support for Q4S6U8 as seed ortholog is 100%.

Group of orthologs #415. Best score 333 bits
Score difference with first non-orthologous sequence - P.jiroveci:333 T.nigroviridis:333

L0PBS9              	100.00%		H3CRP7              	100.00%
                    	       		H3D110              	58.24%
Bootstrap support for L0PBS9 as seed ortholog is 100%.
Bootstrap support for H3CRP7 as seed ortholog is 100%.

Group of orthologs #416. Best score 333 bits
Score difference with first non-orthologous sequence - P.jiroveci:333 T.nigroviridis:211

L0PD17              	100.00%		H3CCX2              	100.00%
Bootstrap support for L0PD17 as seed ortholog is 100%.
Bootstrap support for H3CCX2 as seed ortholog is 100%.

Group of orthologs #417. Best score 332 bits
Score difference with first non-orthologous sequence - P.jiroveci:332 T.nigroviridis:332

L0PEB2              	100.00%		H3DAY4              	100.00%
Bootstrap support for L0PEB2 as seed ortholog is 100%.
Bootstrap support for H3DAY4 as seed ortholog is 100%.

Group of orthologs #418. Best score 331 bits
Score difference with first non-orthologous sequence - P.jiroveci:331 T.nigroviridis:331

L0PBT3              	100.00%		H3C021              	100.00%
Bootstrap support for L0PBT3 as seed ortholog is 100%.
Bootstrap support for H3C021 as seed ortholog is 100%.

Group of orthologs #419. Best score 331 bits
Score difference with first non-orthologous sequence - P.jiroveci:191 T.nigroviridis:331

L0P9F3              	100.00%		H3CZN3              	100.00%
Bootstrap support for L0P9F3 as seed ortholog is 99%.
Bootstrap support for H3CZN3 as seed ortholog is 100%.

Group of orthologs #420. Best score 330 bits
Score difference with first non-orthologous sequence - P.jiroveci:330 T.nigroviridis:120

L0PBM5              	100.00%		H3CJM6              	100.00%
                    	       		H3CF16              	31.89%
Bootstrap support for L0PBM5 as seed ortholog is 100%.
Bootstrap support for H3CJM6 as seed ortholog is 98%.

Group of orthologs #421. Best score 330 bits
Score difference with first non-orthologous sequence - P.jiroveci:330 T.nigroviridis:330

L0PCY9              	100.00%		H3CQ09              	100.00%
Bootstrap support for L0PCY9 as seed ortholog is 100%.
Bootstrap support for H3CQ09 as seed ortholog is 100%.

Group of orthologs #422. Best score 330 bits
Score difference with first non-orthologous sequence - P.jiroveci:330 T.nigroviridis:122

L0P891              	100.00%		H3DDU4              	100.00%
Bootstrap support for L0P891 as seed ortholog is 100%.
Bootstrap support for H3DDU4 as seed ortholog is 99%.

Group of orthologs #423. Best score 330 bits
Score difference with first non-orthologous sequence - P.jiroveci:147 T.nigroviridis:44

L0PCJ5              	100.00%		H3DCT1              	100.00%
Bootstrap support for L0PCJ5 as seed ortholog is 99%.
Bootstrap support for H3DCT1 as seed ortholog is 85%.

Group of orthologs #424. Best score 330 bits
Score difference with first non-orthologous sequence - P.jiroveci:330 T.nigroviridis:330

L0PFI2              	100.00%		Q4S739              	100.00%
Bootstrap support for L0PFI2 as seed ortholog is 100%.
Bootstrap support for Q4S739 as seed ortholog is 100%.

Group of orthologs #425. Best score 329 bits
Score difference with first non-orthologous sequence - P.jiroveci:329 T.nigroviridis:329

L0PBD2              	100.00%		H3CVE8              	100.00%
Bootstrap support for L0PBD2 as seed ortholog is 100%.
Bootstrap support for H3CVE8 as seed ortholog is 100%.

Group of orthologs #426. Best score 329 bits
Score difference with first non-orthologous sequence - P.jiroveci:329 T.nigroviridis:215

L0PF71              	100.00%		H3D6Q6              	100.00%
Bootstrap support for L0PF71 as seed ortholog is 100%.
Bootstrap support for H3D6Q6 as seed ortholog is 100%.

Group of orthologs #427. Best score 329 bits
Score difference with first non-orthologous sequence - P.jiroveci:204 T.nigroviridis:49

L0PBY2              	100.00%		Q4SBG6              	100.00%
Bootstrap support for L0PBY2 as seed ortholog is 100%.
Bootstrap support for Q4SBG6 as seed ortholog is 91%.

Group of orthologs #428. Best score 327 bits
Score difference with first non-orthologous sequence - P.jiroveci:327 T.nigroviridis:327

L0P7N5              	100.00%		H3D5K8              	100.00%
                    	       		H3CC41              	49.20%
Bootstrap support for L0P7N5 as seed ortholog is 100%.
Bootstrap support for H3D5K8 as seed ortholog is 100%.

Group of orthologs #429. Best score 327 bits
Score difference with first non-orthologous sequence - P.jiroveci:327 T.nigroviridis:327

L0PF46              	100.00%		H3CWQ4              	100.00%
Bootstrap support for L0PF46 as seed ortholog is 100%.
Bootstrap support for H3CWQ4 as seed ortholog is 100%.

Group of orthologs #430. Best score 327 bits
Score difference with first non-orthologous sequence - P.jiroveci:274 T.nigroviridis:327

L0PC30              	100.00%		Q4RFP0              	100.00%
Bootstrap support for L0PC30 as seed ortholog is 100%.
Bootstrap support for Q4RFP0 as seed ortholog is 100%.

Group of orthologs #431. Best score 326 bits
Score difference with first non-orthologous sequence - P.jiroveci:326 T.nigroviridis:326

L0PA42              	100.00%		H3CND4              	100.00%
Bootstrap support for L0PA42 as seed ortholog is 100%.
Bootstrap support for H3CND4 as seed ortholog is 100%.

Group of orthologs #432. Best score 326 bits
Score difference with first non-orthologous sequence - P.jiroveci:326 T.nigroviridis:231

L0PEF5              	100.00%		H3D6H9              	100.00%
Bootstrap support for L0PEF5 as seed ortholog is 100%.
Bootstrap support for H3D6H9 as seed ortholog is 100%.

Group of orthologs #433. Best score 324 bits
Score difference with first non-orthologous sequence - P.jiroveci:324 T.nigroviridis:324

L0PAU5              	100.00%		H3D4U0              	100.00%
Bootstrap support for L0PAU5 as seed ortholog is 100%.
Bootstrap support for H3D4U0 as seed ortholog is 100%.

Group of orthologs #434. Best score 322 bits
Score difference with first non-orthologous sequence - P.jiroveci:322 T.nigroviridis:322

L0PEZ2              	100.00%		H3CW06              	100.00%
L0PH30              	85.07%		
Bootstrap support for L0PEZ2 as seed ortholog is 100%.
Bootstrap support for H3CW06 as seed ortholog is 100%.

Group of orthologs #435. Best score 321 bits
Score difference with first non-orthologous sequence - P.jiroveci:321 T.nigroviridis:183

L0PC17              	100.00%		H3DJ60              	100.00%
L0PD22              	52.04%		
Bootstrap support for L0PC17 as seed ortholog is 100%.
Bootstrap support for H3DJ60 as seed ortholog is 100%.

Group of orthologs #436. Best score 321 bits
Score difference with first non-orthologous sequence - P.jiroveci:321 T.nigroviridis:207

L0PD24              	100.00%		H3CHG3              	100.00%
Bootstrap support for L0PD24 as seed ortholog is 100%.
Bootstrap support for H3CHG3 as seed ortholog is 99%.

Group of orthologs #437. Best score 321 bits
Score difference with first non-orthologous sequence - P.jiroveci:321 T.nigroviridis:234

L0PDW0              	100.00%		H3DFJ5              	100.00%
Bootstrap support for L0PDW0 as seed ortholog is 100%.
Bootstrap support for H3DFJ5 as seed ortholog is 100%.

Group of orthologs #438. Best score 320 bits
Score difference with first non-orthologous sequence - P.jiroveci:320 T.nigroviridis:256

L0PB00              	100.00%		H3CUI2              	100.00%
Bootstrap support for L0PB00 as seed ortholog is 100%.
Bootstrap support for H3CUI2 as seed ortholog is 100%.

Group of orthologs #439. Best score 319 bits
Score difference with first non-orthologous sequence - P.jiroveci:319 T.nigroviridis:319

L0P6U2              	100.00%		H3D7E2              	100.00%
Bootstrap support for L0P6U2 as seed ortholog is 100%.
Bootstrap support for H3D7E2 as seed ortholog is 100%.

Group of orthologs #440. Best score 317 bits
Score difference with first non-orthologous sequence - P.jiroveci:317 T.nigroviridis:256

L0P8X1              	100.00%		H3CGT4              	100.00%
Bootstrap support for L0P8X1 as seed ortholog is 100%.
Bootstrap support for H3CGT4 as seed ortholog is 100%.

Group of orthologs #441. Best score 317 bits
Score difference with first non-orthologous sequence - P.jiroveci:317 T.nigroviridis:317

L0PAF9              	100.00%		H3D6H4              	100.00%
Bootstrap support for L0PAF9 as seed ortholog is 100%.
Bootstrap support for H3D6H4 as seed ortholog is 100%.

Group of orthologs #442. Best score 316 bits
Score difference with first non-orthologous sequence - P.jiroveci:316 T.nigroviridis:26

L0PGR0              	100.00%		H3DEC6              	100.00%
                    	       		H3D9Y3              	51.64%
Bootstrap support for L0PGR0 as seed ortholog is 100%.
Bootstrap support for H3DEC6 as seed ortholog is 69%.
Alternative seed ortholog is H3CZQ8 (26 bits away from this cluster)

Group of orthologs #443. Best score 316 bits
Score difference with first non-orthologous sequence - P.jiroveci:316 T.nigroviridis:316

L0PC62              	100.00%		Q4SBC3              	100.00%
Bootstrap support for L0PC62 as seed ortholog is 100%.
Bootstrap support for Q4SBC3 as seed ortholog is 100%.

Group of orthologs #444. Best score 315 bits
Score difference with first non-orthologous sequence - P.jiroveci:315 T.nigroviridis:64

L0PAP4              	100.00%		Q4RBH0              	100.00%
                    	       		Q4RBG9              	54.61%
Bootstrap support for L0PAP4 as seed ortholog is 100%.
Bootstrap support for Q4RBH0 as seed ortholog is 95%.

Group of orthologs #445. Best score 315 bits
Score difference with first non-orthologous sequence - P.jiroveci:315 T.nigroviridis:315

L0PCG4              	100.00%		H3CB17              	100.00%
Bootstrap support for L0PCG4 as seed ortholog is 100%.
Bootstrap support for H3CB17 as seed ortholog is 100%.

Group of orthologs #446. Best score 314 bits
Score difference with first non-orthologous sequence - P.jiroveci:314 T.nigroviridis:111

L0PD18              	100.00%		H3CBM8              	100.00%
Bootstrap support for L0PD18 as seed ortholog is 100%.
Bootstrap support for H3CBM8 as seed ortholog is 99%.

Group of orthologs #447. Best score 314 bits
Score difference with first non-orthologous sequence - P.jiroveci:314 T.nigroviridis:214

L0PFE9              	100.00%		H3DHB7              	100.00%
Bootstrap support for L0PFE9 as seed ortholog is 100%.
Bootstrap support for H3DHB7 as seed ortholog is 100%.

Group of orthologs #448. Best score 313 bits
Score difference with first non-orthologous sequence - P.jiroveci:130 T.nigroviridis:47

L0P6X2              	100.00%		H3D4S9              	100.00%
                    	       		Q4SQY7              	78.21%
                    	       		H3CCD6              	53.85%
Bootstrap support for L0P6X2 as seed ortholog is 99%.
Bootstrap support for H3D4S9 as seed ortholog is 98%.

Group of orthologs #449. Best score 313 bits
Score difference with first non-orthologous sequence - P.jiroveci:313 T.nigroviridis:313

L0P8N3              	100.00%		H3CLZ4              	100.00%
Bootstrap support for L0P8N3 as seed ortholog is 100%.
Bootstrap support for H3CLZ4 as seed ortholog is 100%.

Group of orthologs #450. Best score 313 bits
Score difference with first non-orthologous sequence - P.jiroveci:263 T.nigroviridis:184

L0PEI4              	100.00%		H3CLG0              	100.00%
Bootstrap support for L0PEI4 as seed ortholog is 100%.
Bootstrap support for H3CLG0 as seed ortholog is 100%.

Group of orthologs #451. Best score 313 bits
Score difference with first non-orthologous sequence - P.jiroveci:313 T.nigroviridis:313

L0P9I4              	100.00%		H3DEP0              	100.00%
Bootstrap support for L0P9I4 as seed ortholog is 100%.
Bootstrap support for H3DEP0 as seed ortholog is 100%.

Group of orthologs #452. Best score 313 bits
Score difference with first non-orthologous sequence - P.jiroveci:313 T.nigroviridis:313

L0PFC9              	100.00%		H3DLT6              	100.00%
Bootstrap support for L0PFC9 as seed ortholog is 100%.
Bootstrap support for H3DLT6 as seed ortholog is 100%.

Group of orthologs #453. Best score 312 bits
Score difference with first non-orthologous sequence - P.jiroveci:312 T.nigroviridis:312

L0PDZ2              	100.00%		H3DHL2              	100.00%
Bootstrap support for L0PDZ2 as seed ortholog is 100%.
Bootstrap support for H3DHL2 as seed ortholog is 100%.

Group of orthologs #454. Best score 310 bits
Score difference with first non-orthologous sequence - P.jiroveci:310 T.nigroviridis:310

L0P912              	100.00%		H3CDV3              	100.00%
L0P908              	89.54%		
Bootstrap support for L0P912 as seed ortholog is 100%.
Bootstrap support for H3CDV3 as seed ortholog is 100%.

Group of orthologs #455. Best score 309 bits
Score difference with first non-orthologous sequence - P.jiroveci:309 T.nigroviridis:309

L0PEJ1              	100.00%		H3C0U9              	100.00%
                    	       		H3CGJ2              	33.65%
                    	       		H3CXI4              	31.60%
Bootstrap support for L0PEJ1 as seed ortholog is 100%.
Bootstrap support for H3C0U9 as seed ortholog is 100%.

Group of orthologs #456. Best score 309 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 T.nigroviridis:74

L0PB70              	100.00%		H3CF28              	100.00%
Bootstrap support for L0PB70 as seed ortholog is 99%.
Bootstrap support for H3CF28 as seed ortholog is 98%.

Group of orthologs #457. Best score 309 bits
Score difference with first non-orthologous sequence - P.jiroveci:309 T.nigroviridis:309

L0P983              	100.00%		H3CT55              	100.00%
Bootstrap support for L0P983 as seed ortholog is 100%.
Bootstrap support for H3CT55 as seed ortholog is 100%.

Group of orthologs #458. Best score 309 bits
Score difference with first non-orthologous sequence - P.jiroveci:168 T.nigroviridis:180

L0PBM6              	100.00%		H3DJ12              	100.00%
Bootstrap support for L0PBM6 as seed ortholog is 99%.
Bootstrap support for H3DJ12 as seed ortholog is 99%.

Group of orthologs #459. Best score 308 bits
Score difference with first non-orthologous sequence - P.jiroveci:308 T.nigroviridis:308

L0P9K4              	100.00%		H3CKU4              	100.00%
Bootstrap support for L0P9K4 as seed ortholog is 100%.
Bootstrap support for H3CKU4 as seed ortholog is 100%.

Group of orthologs #460. Best score 308 bits
Score difference with first non-orthologous sequence - P.jiroveci:308 T.nigroviridis:308

L0PI09              	100.00%		H3D060              	100.00%
Bootstrap support for L0PI09 as seed ortholog is 100%.
Bootstrap support for H3D060 as seed ortholog is 100%.

Group of orthologs #461. Best score 307 bits
Score difference with first non-orthologous sequence - P.jiroveci:307 T.nigroviridis:307

L0PBZ7              	100.00%		H3CCF2              	100.00%
Bootstrap support for L0PBZ7 as seed ortholog is 100%.
Bootstrap support for H3CCF2 as seed ortholog is 100%.

Group of orthologs #462. Best score 306 bits
Score difference with first non-orthologous sequence - P.jiroveci:306 T.nigroviridis:306

L0PAH9              	100.00%		H3DD24              	100.00%
L0PAZ7              	38.21%		
Bootstrap support for L0PAH9 as seed ortholog is 100%.
Bootstrap support for H3DD24 as seed ortholog is 100%.

Group of orthologs #463. Best score 306 bits
Score difference with first non-orthologous sequence - P.jiroveci:306 T.nigroviridis:306

L0PIC6              	100.00%		H3CJN2              	100.00%
Bootstrap support for L0PIC6 as seed ortholog is 100%.
Bootstrap support for H3CJN2 as seed ortholog is 100%.

Group of orthologs #464. Best score 306 bits
Score difference with first non-orthologous sequence - P.jiroveci:164 T.nigroviridis:306

L0PCV1              	100.00%		H3D910              	100.00%
Bootstrap support for L0PCV1 as seed ortholog is 99%.
Bootstrap support for H3D910 as seed ortholog is 100%.

Group of orthologs #465. Best score 305 bits
Score difference with first non-orthologous sequence - P.jiroveci:217 T.nigroviridis:144

L0PDA0              	100.00%		H3CDV1              	100.00%
Bootstrap support for L0PDA0 as seed ortholog is 100%.
Bootstrap support for H3CDV1 as seed ortholog is 100%.

Group of orthologs #466. Best score 305 bits
Score difference with first non-orthologous sequence - P.jiroveci:305 T.nigroviridis:305

L0PA63              	100.00%		H3DGR4              	100.00%
Bootstrap support for L0PA63 as seed ortholog is 100%.
Bootstrap support for H3DGR4 as seed ortholog is 100%.

Group of orthologs #467. Best score 304 bits
Score difference with first non-orthologous sequence - P.jiroveci:304 T.nigroviridis:304

L0PFG1              	100.00%		H3CVV1              	100.00%
Bootstrap support for L0PFG1 as seed ortholog is 100%.
Bootstrap support for H3CVV1 as seed ortholog is 100%.

Group of orthologs #468. Best score 304 bits
Score difference with first non-orthologous sequence - P.jiroveci:304 T.nigroviridis:220

L0PDL9              	100.00%		H3D3I6              	100.00%
Bootstrap support for L0PDL9 as seed ortholog is 100%.
Bootstrap support for H3D3I6 as seed ortholog is 100%.

Group of orthologs #469. Best score 304 bits
Score difference with first non-orthologous sequence - P.jiroveci:304 T.nigroviridis:304

L0PHG9              	100.00%		H3DJR1              	100.00%
Bootstrap support for L0PHG9 as seed ortholog is 100%.
Bootstrap support for H3DJR1 as seed ortholog is 100%.

Group of orthologs #470. Best score 303 bits
Score difference with first non-orthologous sequence - P.jiroveci:303 T.nigroviridis:303

L0P8B2              	100.00%		Q4RQ99              	100.00%
Bootstrap support for L0P8B2 as seed ortholog is 100%.
Bootstrap support for Q4RQ99 as seed ortholog is 100%.

Group of orthologs #471. Best score 302 bits
Score difference with first non-orthologous sequence - P.jiroveci:302 T.nigroviridis:302

L0PEM6              	100.00%		H3DAQ3              	100.00%
                    	       		H3C4Q3              	66.06%
                    	       		H3CTH1              	62.37%
                    	       		H3CMA8              	53.05%
                    	       		H3CE52              	49.63%
                    	       		H3D0J9              	33.87%
Bootstrap support for L0PEM6 as seed ortholog is 100%.
Bootstrap support for H3DAQ3 as seed ortholog is 100%.

Group of orthologs #472. Best score 302 bits
Score difference with first non-orthologous sequence - P.jiroveci:302 T.nigroviridis:32

L0PF98              	100.00%		H3DEJ2              	100.00%
                    	       		H3CNV0              	58.42%
Bootstrap support for L0PF98 as seed ortholog is 100%.
Bootstrap support for H3DEJ2 as seed ortholog is 47%.
Alternative seed ortholog is H3DCN8 (32 bits away from this cluster)

Group of orthologs #473. Best score 302 bits
Score difference with first non-orthologous sequence - P.jiroveci:167 T.nigroviridis:201

L0PDB7              	100.00%		H3CYH4              	100.00%
Bootstrap support for L0PDB7 as seed ortholog is 100%.
Bootstrap support for H3CYH4 as seed ortholog is 100%.

Group of orthologs #474. Best score 302 bits
Score difference with first non-orthologous sequence - P.jiroveci:302 T.nigroviridis:302

L0PIV4              	100.00%		H3CV73              	100.00%
Bootstrap support for L0PIV4 as seed ortholog is 100%.
Bootstrap support for H3CV73 as seed ortholog is 100%.

Group of orthologs #475. Best score 302 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 T.nigroviridis:98

L0P966              	100.00%		H3D7L9              	100.00%
Bootstrap support for L0P966 as seed ortholog is 99%.
Bootstrap support for H3D7L9 as seed ortholog is 97%.

Group of orthologs #476. Best score 301 bits
Score difference with first non-orthologous sequence - P.jiroveci:301 T.nigroviridis:301

L0PAG0              	100.00%		H3CC96              	100.00%
Bootstrap support for L0PAG0 as seed ortholog is 100%.
Bootstrap support for H3CC96 as seed ortholog is 100%.

Group of orthologs #477. Best score 301 bits
Score difference with first non-orthologous sequence - P.jiroveci:55 T.nigroviridis:301

L0PAM1              	100.00%		Q4RFD8              	100.00%
Bootstrap support for L0PAM1 as seed ortholog is 92%.
Bootstrap support for Q4RFD8 as seed ortholog is 100%.

Group of orthologs #478. Best score 300 bits
Score difference with first non-orthologous sequence - P.jiroveci:300 T.nigroviridis:120

L0PG89              	100.00%		H3CE79              	100.00%
                    	       		H3C5S4              	19.96%
                    	       		H3DKM3              	18.38%
                    	       		H3CB13              	8.89%
Bootstrap support for L0PG89 as seed ortholog is 100%.
Bootstrap support for H3CE79 as seed ortholog is 99%.

Group of orthologs #479. Best score 300 bits
Score difference with first non-orthologous sequence - P.jiroveci:300 T.nigroviridis:300

L0P9Z7              	100.00%		H3CEY2              	100.00%
                    	       		H3CA34              	68.96%
Bootstrap support for L0P9Z7 as seed ortholog is 100%.
Bootstrap support for H3CEY2 as seed ortholog is 100%.

Group of orthologs #480. Best score 300 bits
Score difference with first non-orthologous sequence - P.jiroveci:300 T.nigroviridis:300

L0PF74              	100.00%		H3D591              	100.00%
Bootstrap support for L0PF74 as seed ortholog is 100%.
Bootstrap support for H3D591 as seed ortholog is 100%.

Group of orthologs #481. Best score 299 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 T.nigroviridis:43

L0P8E8              	100.00%		H3CU70              	100.00%
L0PEB0              	100.00%		H3DPP0              	22.50%
Bootstrap support for L0P8E8 as seed ortholog is 92%.
Bootstrap support for L0PEB0 as seed ortholog is 93%.
Bootstrap support for H3CU70 as seed ortholog is 95%.

Group of orthologs #482. Best score 299 bits
Score difference with first non-orthologous sequence - P.jiroveci:299 T.nigroviridis:299

L0PCX5              	100.00%		H3DCH0              	100.00%
Bootstrap support for L0PCX5 as seed ortholog is 100%.
Bootstrap support for H3DCH0 as seed ortholog is 100%.

Group of orthologs #483. Best score 298 bits
Score difference with first non-orthologous sequence - P.jiroveci:184 T.nigroviridis:119

L0PB10              	100.00%		H3CWA2              	100.00%
Bootstrap support for L0PB10 as seed ortholog is 100%.
Bootstrap support for H3CWA2 as seed ortholog is 99%.

Group of orthologs #484. Best score 298 bits
Score difference with first non-orthologous sequence - P.jiroveci:298 T.nigroviridis:298

L0P7I8              	100.00%		H3DAY9              	100.00%
Bootstrap support for L0P7I8 as seed ortholog is 100%.
Bootstrap support for H3DAY9 as seed ortholog is 100%.

Group of orthologs #485. Best score 298 bits
Score difference with first non-orthologous sequence - P.jiroveci:298 T.nigroviridis:298

L0PDI7              	100.00%		H3DCY8              	100.00%
Bootstrap support for L0PDI7 as seed ortholog is 100%.
Bootstrap support for H3DCY8 as seed ortholog is 100%.

Group of orthologs #486. Best score 297 bits
Score difference with first non-orthologous sequence - P.jiroveci:297 T.nigroviridis:143

L0PBD0              	100.00%		H3C3Y1              	100.00%
                    	       		H3DJ15              	32.25%
Bootstrap support for L0PBD0 as seed ortholog is 100%.
Bootstrap support for H3C3Y1 as seed ortholog is 98%.

Group of orthologs #487. Best score 297 bits
Score difference with first non-orthologous sequence - P.jiroveci:243 T.nigroviridis:109

L0P8I7              	100.00%		H3D0L3              	100.00%
Bootstrap support for L0P8I7 as seed ortholog is 100%.
Bootstrap support for H3D0L3 as seed ortholog is 99%.

Group of orthologs #488. Best score 296 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 T.nigroviridis:105

L0PD03              	100.00%		H3CB35              	100.00%
Bootstrap support for L0PD03 as seed ortholog is 93%.
Bootstrap support for H3CB35 as seed ortholog is 99%.

Group of orthologs #489. Best score 296 bits
Score difference with first non-orthologous sequence - P.jiroveci:296 T.nigroviridis:296

L0PCI3              	100.00%		H3CP78              	100.00%
Bootstrap support for L0PCI3 as seed ortholog is 100%.
Bootstrap support for H3CP78 as seed ortholog is 100%.

Group of orthologs #490. Best score 296 bits
Score difference with first non-orthologous sequence - P.jiroveci:296 T.nigroviridis:296

L0PDV1              	100.00%		H3CS44              	100.00%
Bootstrap support for L0PDV1 as seed ortholog is 100%.
Bootstrap support for H3CS44 as seed ortholog is 100%.

Group of orthologs #491. Best score 295 bits
Score difference with first non-orthologous sequence - P.jiroveci:295 T.nigroviridis:295

L0PDC7              	100.00%		H3DL02              	100.00%
                    	       		H3CT97              	23.94%
Bootstrap support for L0PDC7 as seed ortholog is 100%.
Bootstrap support for H3DL02 as seed ortholog is 100%.

Group of orthologs #492. Best score 295 bits
Score difference with first non-orthologous sequence - P.jiroveci:295 T.nigroviridis:295

L0PAC0              	100.00%		H3BW40              	100.00%
Bootstrap support for L0PAC0 as seed ortholog is 100%.
Bootstrap support for H3BW40 as seed ortholog is 100%.

Group of orthologs #493. Best score 294 bits
Score difference with first non-orthologous sequence - P.jiroveci:294 T.nigroviridis:294

L0PF83              	100.00%		H3CHM0              	100.00%
Bootstrap support for L0PF83 as seed ortholog is 100%.
Bootstrap support for H3CHM0 as seed ortholog is 100%.

Group of orthologs #494. Best score 294 bits
Score difference with first non-orthologous sequence - P.jiroveci:294 T.nigroviridis:216

L0PAL2              	100.00%		H3CV53              	100.00%
Bootstrap support for L0PAL2 as seed ortholog is 100%.
Bootstrap support for H3CV53 as seed ortholog is 100%.

Group of orthologs #495. Best score 294 bits
Score difference with first non-orthologous sequence - P.jiroveci:294 T.nigroviridis:246

L0P8L5              	100.00%		H3CZ22              	100.00%
Bootstrap support for L0P8L5 as seed ortholog is 100%.
Bootstrap support for H3CZ22 as seed ortholog is 100%.

Group of orthologs #496. Best score 294 bits
Score difference with first non-orthologous sequence - P.jiroveci:36 T.nigroviridis:72

L0PD71              	100.00%		Q4RH34              	100.00%
Bootstrap support for L0PD71 as seed ortholog is 85%.
Bootstrap support for Q4RH34 as seed ortholog is 97%.

Group of orthologs #497. Best score 294 bits
Score difference with first non-orthologous sequence - P.jiroveci:294 T.nigroviridis:206

L0PEM3              	100.00%		Q4SLR1              	100.00%
Bootstrap support for L0PEM3 as seed ortholog is 100%.
Bootstrap support for Q4SLR1 as seed ortholog is 99%.

Group of orthologs #498. Best score 293 bits
Score difference with first non-orthologous sequence - P.jiroveci:293 T.nigroviridis:293

L0PEB1              	100.00%		H3DEG9              	100.00%
                    	       		H3D9K5              	35.11%
Bootstrap support for L0PEB1 as seed ortholog is 100%.
Bootstrap support for H3DEG9 as seed ortholog is 100%.

Group of orthologs #499. Best score 293 bits
Score difference with first non-orthologous sequence - P.jiroveci:293 T.nigroviridis:57

L0P9S5              	100.00%		H3C9E6              	100.00%
Bootstrap support for L0P9S5 as seed ortholog is 100%.
Bootstrap support for H3C9E6 as seed ortholog is 98%.

Group of orthologs #500. Best score 293 bits
Score difference with first non-orthologous sequence - P.jiroveci:293 T.nigroviridis:88

L0P8B4              	100.00%		H3DDM5              	100.00%
Bootstrap support for L0P8B4 as seed ortholog is 100%.
Bootstrap support for H3DDM5 as seed ortholog is 97%.

Group of orthologs #501. Best score 293 bits
Score difference with first non-orthologous sequence - P.jiroveci:293 T.nigroviridis:293

L0PF79              	100.00%		H3DA40              	100.00%
Bootstrap support for L0PF79 as seed ortholog is 100%.
Bootstrap support for H3DA40 as seed ortholog is 100%.

Group of orthologs #502. Best score 292 bits
Score difference with first non-orthologous sequence - P.jiroveci:155 T.nigroviridis:292

L0PBF0              	100.00%		H3D931              	100.00%
                    	       		H3D212              	56.19%
Bootstrap support for L0PBF0 as seed ortholog is 100%.
Bootstrap support for H3D931 as seed ortholog is 100%.

Group of orthologs #503. Best score 292 bits
Score difference with first non-orthologous sequence - P.jiroveci:292 T.nigroviridis:196

L0PBK1              	100.00%		H3C736              	100.00%
Bootstrap support for L0PBK1 as seed ortholog is 100%.
Bootstrap support for H3C736 as seed ortholog is 99%.

Group of orthologs #504. Best score 292 bits
Score difference with first non-orthologous sequence - P.jiroveci:292 T.nigroviridis:292

L0P870              	100.00%		H3D2U9              	100.00%
Bootstrap support for L0P870 as seed ortholog is 100%.
Bootstrap support for H3D2U9 as seed ortholog is 100%.

Group of orthologs #505. Best score 292 bits
Score difference with first non-orthologous sequence - P.jiroveci:241 T.nigroviridis:208

L0PFE0              	100.00%		H3D5U2              	100.00%
Bootstrap support for L0PFE0 as seed ortholog is 100%.
Bootstrap support for H3D5U2 as seed ortholog is 100%.

Group of orthologs #506. Best score 291 bits
Score difference with first non-orthologous sequence - P.jiroveci:291 T.nigroviridis:291

L0P9G9              	100.00%		H3DIP3              	100.00%
Bootstrap support for L0P9G9 as seed ortholog is 100%.
Bootstrap support for H3DIP3 as seed ortholog is 100%.

Group of orthologs #507. Best score 291 bits
Score difference with first non-orthologous sequence - P.jiroveci:247 T.nigroviridis:235

L0P8I1              	100.00%		H3DQ17              	100.00%
Bootstrap support for L0P8I1 as seed ortholog is 100%.
Bootstrap support for H3DQ17 as seed ortholog is 100%.

Group of orthologs #508. Best score 291 bits
Score difference with first non-orthologous sequence - P.jiroveci:291 T.nigroviridis:291

L0PDY1              	100.00%		H3DIX7              	100.00%
Bootstrap support for L0PDY1 as seed ortholog is 100%.
Bootstrap support for H3DIX7 as seed ortholog is 100%.

Group of orthologs #509. Best score 290 bits
Score difference with first non-orthologous sequence - P.jiroveci:290 T.nigroviridis:290

L0PGL6              	100.00%		H3D125              	100.00%
Bootstrap support for L0PGL6 as seed ortholog is 100%.
Bootstrap support for H3D125 as seed ortholog is 100%.

Group of orthologs #510. Best score 290 bits
Score difference with first non-orthologous sequence - P.jiroveci:290 T.nigroviridis:290

L0PFZ0              	100.00%		H3DBH6              	100.00%
Bootstrap support for L0PFZ0 as seed ortholog is 100%.
Bootstrap support for H3DBH6 as seed ortholog is 100%.

Group of orthologs #511. Best score 290 bits
Score difference with first non-orthologous sequence - P.jiroveci:290 T.nigroviridis:290

L0PHI3              	100.00%		H3DDP9              	100.00%
Bootstrap support for L0PHI3 as seed ortholog is 100%.
Bootstrap support for H3DDP9 as seed ortholog is 100%.

Group of orthologs #512. Best score 288 bits
Score difference with first non-orthologous sequence - P.jiroveci:288 T.nigroviridis:288

L0PHK3              	100.00%		H3C179              	100.00%
                    	       		H3CRR5              	98.85%
Bootstrap support for L0PHK3 as seed ortholog is 100%.
Bootstrap support for H3C179 as seed ortholog is 100%.

Group of orthologs #513. Best score 288 bits
Score difference with first non-orthologous sequence - P.jiroveci:288 T.nigroviridis:288

L0PAJ2              	100.00%		H3CQK2              	100.00%
Bootstrap support for L0PAJ2 as seed ortholog is 100%.
Bootstrap support for H3CQK2 as seed ortholog is 100%.

Group of orthologs #514. Best score 288 bits
Score difference with first non-orthologous sequence - P.jiroveci:288 T.nigroviridis:288

L0PCY0              	100.00%		H3DIT0              	100.00%
Bootstrap support for L0PCY0 as seed ortholog is 100%.
Bootstrap support for H3DIT0 as seed ortholog is 100%.

Group of orthologs #515. Best score 288 bits
Score difference with first non-orthologous sequence - P.jiroveci:288 T.nigroviridis:158

L0PCG0              	100.00%		Q4SMV9              	100.00%
Bootstrap support for L0PCG0 as seed ortholog is 100%.
Bootstrap support for Q4SMV9 as seed ortholog is 100%.

Group of orthologs #516. Best score 287 bits
Score difference with first non-orthologous sequence - P.jiroveci:287 T.nigroviridis:287

L0PG44              	100.00%		H3C3S7              	100.00%
Bootstrap support for L0PG44 as seed ortholog is 100%.
Bootstrap support for H3C3S7 as seed ortholog is 100%.

Group of orthologs #517. Best score 287 bits
Score difference with first non-orthologous sequence - P.jiroveci:287 T.nigroviridis:287

L0PBK2              	100.00%		H3CUG9              	100.00%
Bootstrap support for L0PBK2 as seed ortholog is 100%.
Bootstrap support for H3CUG9 as seed ortholog is 100%.

Group of orthologs #518. Best score 287 bits
Score difference with first non-orthologous sequence - P.jiroveci:287 T.nigroviridis:287

L0PF92              	100.00%		H3DAK7              	100.00%
Bootstrap support for L0PF92 as seed ortholog is 100%.
Bootstrap support for H3DAK7 as seed ortholog is 100%.

Group of orthologs #519. Best score 286 bits
Score difference with first non-orthologous sequence - P.jiroveci:286 T.nigroviridis:96

L0PA09              	100.00%		H3D419              	100.00%
Bootstrap support for L0PA09 as seed ortholog is 100%.
Bootstrap support for H3D419 as seed ortholog is 99%.

Group of orthologs #520. Best score 286 bits
Score difference with first non-orthologous sequence - P.jiroveci:187 T.nigroviridis:286

L0PB03              	100.00%		H3DCN4              	100.00%
Bootstrap support for L0PB03 as seed ortholog is 100%.
Bootstrap support for H3DCN4 as seed ortholog is 100%.

Group of orthologs #521. Best score 285 bits
Score difference with first non-orthologous sequence - P.jiroveci:285 T.nigroviridis:87

L0PGF2              	100.00%		H3C0X9              	100.00%
                    	       		H3C3D6              	39.50%
                    	       		H3CXL4              	24.79%
Bootstrap support for L0PGF2 as seed ortholog is 100%.
Bootstrap support for H3C0X9 as seed ortholog is 92%.

Group of orthologs #522. Best score 285 bits
Score difference with first non-orthologous sequence - P.jiroveci:285 T.nigroviridis:285

L0PCL4              	100.00%		H3D6D9              	100.00%
                    	       		H3BVJ5              	40.39%
                    	       		H3C0L9              	11.50%
Bootstrap support for L0PCL4 as seed ortholog is 100%.
Bootstrap support for H3D6D9 as seed ortholog is 100%.

Group of orthologs #523. Best score 285 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 T.nigroviridis:215

L0PIJ3              	100.00%		H3DKL8              	100.00%
L0PEP1              	82.02%		H3CI21              	54.36%
Bootstrap support for L0PIJ3 as seed ortholog is 100%.
Bootstrap support for H3DKL8 as seed ortholog is 99%.

Group of orthologs #524. Best score 285 bits
Score difference with first non-orthologous sequence - P.jiroveci:197 T.nigroviridis:243

L0PFS8              	100.00%		Q4SRB7              	100.00%
Bootstrap support for L0PFS8 as seed ortholog is 100%.
Bootstrap support for Q4SRB7 as seed ortholog is 100%.

Group of orthologs #525. Best score 284 bits
Score difference with first non-orthologous sequence - P.jiroveci:284 T.nigroviridis:149

L0P9F6              	100.00%		H3CXE8              	100.00%
                    	       		H3DL25              	81.13%
Bootstrap support for L0P9F6 as seed ortholog is 100%.
Bootstrap support for H3CXE8 as seed ortholog is 99%.

Group of orthologs #526. Best score 284 bits
Score difference with first non-orthologous sequence - P.jiroveci:236 T.nigroviridis:98

L0PH42              	100.00%		H3CPM5              	100.00%
                    	       		H3CWL1              	89.88%
Bootstrap support for L0PH42 as seed ortholog is 100%.
Bootstrap support for H3CPM5 as seed ortholog is 99%.

Group of orthologs #527. Best score 284 bits
Score difference with first non-orthologous sequence - P.jiroveci:284 T.nigroviridis:284

L0PG34              	100.00%		H3DM29              	100.00%
                    	       		H3CA29              	15.17%
Bootstrap support for L0PG34 as seed ortholog is 100%.
Bootstrap support for H3DM29 as seed ortholog is 100%.

Group of orthologs #528. Best score 284 bits
Score difference with first non-orthologous sequence - P.jiroveci:284 T.nigroviridis:284

L0P9T5              	100.00%		H3CE53              	100.00%
Bootstrap support for L0P9T5 as seed ortholog is 100%.
Bootstrap support for H3CE53 as seed ortholog is 100%.

Group of orthologs #529. Best score 284 bits
Score difference with first non-orthologous sequence - P.jiroveci:284 T.nigroviridis:284

L0PG43              	100.00%		H3CXU3              	100.00%
Bootstrap support for L0PG43 as seed ortholog is 100%.
Bootstrap support for H3CXU3 as seed ortholog is 100%.

Group of orthologs #530. Best score 284 bits
Score difference with first non-orthologous sequence - P.jiroveci:187 T.nigroviridis:90

L0PC59              	100.00%		H3DQL6              	100.00%
Bootstrap support for L0PC59 as seed ortholog is 100%.
Bootstrap support for H3DQL6 as seed ortholog is 100%.

Group of orthologs #531. Best score 282 bits
Score difference with first non-orthologous sequence - P.jiroveci:282 T.nigroviridis:282

L0P7Q3              	100.00%		H3BX02              	100.00%
Bootstrap support for L0P7Q3 as seed ortholog is 100%.
Bootstrap support for H3BX02 as seed ortholog is 100%.

Group of orthologs #532. Best score 282 bits
Score difference with first non-orthologous sequence - P.jiroveci:282 T.nigroviridis:282

L0PHG7              	100.00%		H3D0A0              	100.00%
Bootstrap support for L0PHG7 as seed ortholog is 100%.
Bootstrap support for H3D0A0 as seed ortholog is 100%.

Group of orthologs #533. Best score 282 bits
Score difference with first non-orthologous sequence - P.jiroveci:282 T.nigroviridis:223

L0PC61              	100.00%		H3DFZ4              	100.00%
Bootstrap support for L0PC61 as seed ortholog is 100%.
Bootstrap support for H3DFZ4 as seed ortholog is 100%.

Group of orthologs #534. Best score 280 bits
Score difference with first non-orthologous sequence - P.jiroveci:280 T.nigroviridis:223

L0PHJ3              	100.00%		H3CUT3              	100.00%
Bootstrap support for L0PHJ3 as seed ortholog is 100%.
Bootstrap support for H3CUT3 as seed ortholog is 100%.

Group of orthologs #535. Best score 279 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 T.nigroviridis:27

L0PB47              	100.00%		H3CSM8              	100.00%
                    	       		H3CC53              	36.80%
Bootstrap support for L0PB47 as seed ortholog is 99%.
Bootstrap support for H3CSM8 as seed ortholog is 78%.

Group of orthologs #536. Best score 279 bits
Score difference with first non-orthologous sequence - P.jiroveci:221 T.nigroviridis:132

L0PGP6              	100.00%		Q4RVC5              	100.00%
                    	       		H3DHF1              	55.56%
Bootstrap support for L0PGP6 as seed ortholog is 100%.
Bootstrap support for Q4RVC5 as seed ortholog is 100%.

Group of orthologs #537. Best score 279 bits
Score difference with first non-orthologous sequence - P.jiroveci:233 T.nigroviridis:182

L0PE04              	100.00%		H3CP56              	100.00%
Bootstrap support for L0PE04 as seed ortholog is 100%.
Bootstrap support for H3CP56 as seed ortholog is 100%.

Group of orthologs #538. Best score 278 bits
Score difference with first non-orthologous sequence - P.jiroveci:278 T.nigroviridis:278

L0PA60              	100.00%		H3CRN0              	100.00%
Bootstrap support for L0PA60 as seed ortholog is 100%.
Bootstrap support for H3CRN0 as seed ortholog is 100%.

Group of orthologs #539. Best score 278 bits
Score difference with first non-orthologous sequence - P.jiroveci:278 T.nigroviridis:278

L0P865              	100.00%		H3D7J6              	100.00%
Bootstrap support for L0P865 as seed ortholog is 100%.
Bootstrap support for H3D7J6 as seed ortholog is 100%.

Group of orthologs #540. Best score 276 bits
Score difference with first non-orthologous sequence - P.jiroveci:276 T.nigroviridis:83

L0PCJ2              	100.00%		H3CR86              	100.00%
                    	       		H3DLF2              	5.07%
Bootstrap support for L0PCJ2 as seed ortholog is 100%.
Bootstrap support for H3CR86 as seed ortholog is 99%.

Group of orthologs #541. Best score 276 bits
Score difference with first non-orthologous sequence - P.jiroveci:276 T.nigroviridis:276

L0PBE0              	100.00%		Q4RYW0              	100.00%
                    	       		H3DAJ8              	68.84%
Bootstrap support for L0PBE0 as seed ortholog is 100%.
Bootstrap support for Q4RYW0 as seed ortholog is 100%.

Group of orthologs #542. Best score 275 bits
Score difference with first non-orthologous sequence - P.jiroveci:275 T.nigroviridis:275

L0PEV9              	100.00%		H3CAX9              	100.00%
Bootstrap support for L0PEV9 as seed ortholog is 100%.
Bootstrap support for H3CAX9 as seed ortholog is 100%.

Group of orthologs #543. Best score 275 bits
Score difference with first non-orthologous sequence - P.jiroveci:275 T.nigroviridis:127

L0P8F8              	100.00%		H3D379              	100.00%
Bootstrap support for L0P8F8 as seed ortholog is 100%.
Bootstrap support for H3D379 as seed ortholog is 99%.

Group of orthologs #544. Best score 275 bits
Score difference with first non-orthologous sequence - P.jiroveci:275 T.nigroviridis:275

L0P9W3              	100.00%		H3DM02              	100.00%
Bootstrap support for L0P9W3 as seed ortholog is 100%.
Bootstrap support for H3DM02 as seed ortholog is 100%.

Group of orthologs #545. Best score 274 bits
Score difference with first non-orthologous sequence - P.jiroveci:274 T.nigroviridis:274

L0PEY2              	100.00%		H3BYW9              	100.00%
Bootstrap support for L0PEY2 as seed ortholog is 100%.
Bootstrap support for H3BYW9 as seed ortholog is 100%.

Group of orthologs #546. Best score 274 bits
Score difference with first non-orthologous sequence - P.jiroveci:274 T.nigroviridis:49

L0PEJ3              	100.00%		H3CKP2              	100.00%
Bootstrap support for L0PEJ3 as seed ortholog is 100%.
Bootstrap support for H3CKP2 as seed ortholog is 87%.

Group of orthologs #547. Best score 273 bits
Score difference with first non-orthologous sequence - P.jiroveci:273 T.nigroviridis:273

L0PDA9              	100.00%		H3DI55              	100.00%
Bootstrap support for L0PDA9 as seed ortholog is 100%.
Bootstrap support for H3DI55 as seed ortholog is 100%.

Group of orthologs #548. Best score 273 bits
Score difference with first non-orthologous sequence - P.jiroveci:273 T.nigroviridis:273

L0P8P7              	100.00%		Q4T863              	100.00%
Bootstrap support for L0P8P7 as seed ortholog is 100%.
Bootstrap support for Q4T863 as seed ortholog is 100%.

Group of orthologs #549. Best score 272 bits
Score difference with first non-orthologous sequence - P.jiroveci:218 T.nigroviridis:211

L0PHK8              	100.00%		H3CNR0              	100.00%
Bootstrap support for L0PHK8 as seed ortholog is 100%.
Bootstrap support for H3CNR0 as seed ortholog is 100%.

Group of orthologs #550. Best score 271 bits
Score difference with first non-orthologous sequence - P.jiroveci:36 T.nigroviridis:29

L0PAI9              	100.00%		H3CQY5              	100.00%
                    	       		H3DES0              	70.51%
                    	       		H3CCC5              	31.04%
                    	       		H3C050              	29.49%
                    	       		H3D268              	19.96%
Bootstrap support for L0PAI9 as seed ortholog is 84%.
Bootstrap support for H3CQY5 as seed ortholog is 77%.

Group of orthologs #551. Best score 271 bits
Score difference with first non-orthologous sequence - P.jiroveci:271 T.nigroviridis:227

L0PB61              	100.00%		H3CHP8              	100.00%
Bootstrap support for L0PB61 as seed ortholog is 100%.
Bootstrap support for H3CHP8 as seed ortholog is 100%.

Group of orthologs #552. Best score 270 bits
Score difference with first non-orthologous sequence - P.jiroveci:163 T.nigroviridis:112

L0P9E4              	100.00%		Q4S991              	100.00%
                    	       		H3C873              	76.60%
                    	       		H3DAT1              	69.15%
                    	       		H3D2S4              	23.40%
Bootstrap support for L0P9E4 as seed ortholog is 100%.
Bootstrap support for Q4S991 as seed ortholog is 99%.

Group of orthologs #553. Best score 270 bits
Score difference with first non-orthologous sequence - P.jiroveci:270 T.nigroviridis:270

L0PG08              	100.00%		H3CJN9              	100.00%
Bootstrap support for L0PG08 as seed ortholog is 100%.
Bootstrap support for H3CJN9 as seed ortholog is 100%.

Group of orthologs #554. Best score 269 bits
Score difference with first non-orthologous sequence - P.jiroveci:173 T.nigroviridis:269

L0PFU1              	100.00%		H3CW10              	100.00%
Bootstrap support for L0PFU1 as seed ortholog is 100%.
Bootstrap support for H3CW10 as seed ortholog is 100%.

Group of orthologs #555. Best score 268 bits
Score difference with first non-orthologous sequence - P.jiroveci:268 T.nigroviridis:268

L0PG22              	100.00%		H3CGK5              	100.00%
L0PB04              	73.18%		
Bootstrap support for L0PG22 as seed ortholog is 100%.
Bootstrap support for H3CGK5 as seed ortholog is 100%.

Group of orthologs #556. Best score 268 bits
Score difference with first non-orthologous sequence - P.jiroveci:268 T.nigroviridis:216

L0PHN0              	100.00%		H3DMA5              	100.00%
Bootstrap support for L0PHN0 as seed ortholog is 100%.
Bootstrap support for H3DMA5 as seed ortholog is 100%.

Group of orthologs #557. Best score 267 bits
Score difference with first non-orthologous sequence - P.jiroveci:267 T.nigroviridis:192

L0PEH7              	100.00%		H3CGU7              	100.00%
Bootstrap support for L0PEH7 as seed ortholog is 100%.
Bootstrap support for H3CGU7 as seed ortholog is 99%.

Group of orthologs #558. Best score 266 bits
Score difference with first non-orthologous sequence - P.jiroveci:266 T.nigroviridis:266

L0PES4              	100.00%		H3D945              	100.00%
Bootstrap support for L0PES4 as seed ortholog is 100%.
Bootstrap support for H3D945 as seed ortholog is 100%.

Group of orthologs #559. Best score 266 bits
Score difference with first non-orthologous sequence - P.jiroveci:266 T.nigroviridis:266

L0PA36              	100.00%		H3DKM8              	100.00%
Bootstrap support for L0PA36 as seed ortholog is 100%.
Bootstrap support for H3DKM8 as seed ortholog is 100%.

Group of orthologs #560. Best score 265 bits
Score difference with first non-orthologous sequence - P.jiroveci:175 T.nigroviridis:265

L0PBV6              	100.00%		Q4SGW1              	100.00%
                    	       		Q4RYU9              	44.83%
Bootstrap support for L0PBV6 as seed ortholog is 100%.
Bootstrap support for Q4SGW1 as seed ortholog is 100%.

Group of orthologs #561. Best score 265 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 T.nigroviridis:80

L0PBP2              	100.00%		H3DQ38              	100.00%
Bootstrap support for L0PBP2 as seed ortholog is 99%.
Bootstrap support for H3DQ38 as seed ortholog is 98%.

Group of orthologs #562. Best score 264 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 T.nigroviridis:31

L0PDD3              	100.00%		H3DEH7              	100.00%
                    	       		Q4SQI1              	100.00%
Bootstrap support for L0PDD3 as seed ortholog is 99%.
Bootstrap support for H3DEH7 as seed ortholog is 85%.
Bootstrap support for Q4SQI1 as seed ortholog is 88%.

Group of orthologs #563. Best score 264 bits
Score difference with first non-orthologous sequence - P.jiroveci:264 T.nigroviridis:148

L0PBM0              	100.00%		Q4SVI5              	100.00%
                    	       		H3D3G2              	10.20%
Bootstrap support for L0PBM0 as seed ortholog is 100%.
Bootstrap support for Q4SVI5 as seed ortholog is 99%.

Group of orthologs #564. Best score 264 bits
Score difference with first non-orthologous sequence - P.jiroveci:264 T.nigroviridis:264

L0PD41              	100.00%		H3C9H0              	100.00%
Bootstrap support for L0PD41 as seed ortholog is 100%.
Bootstrap support for H3C9H0 as seed ortholog is 100%.

Group of orthologs #565. Best score 264 bits
Score difference with first non-orthologous sequence - P.jiroveci:264 T.nigroviridis:264

L0PDJ2              	100.00%		Q4S214              	100.00%
Bootstrap support for L0PDJ2 as seed ortholog is 100%.
Bootstrap support for Q4S214 as seed ortholog is 100%.

Group of orthologs #566. Best score 263 bits
Score difference with first non-orthologous sequence - P.jiroveci:263 T.nigroviridis:98

L0P962              	100.00%		H3CCG1              	100.00%
Bootstrap support for L0P962 as seed ortholog is 100%.
Bootstrap support for H3CCG1 as seed ortholog is 95%.

Group of orthologs #567. Best score 263 bits
Score difference with first non-orthologous sequence - P.jiroveci:263 T.nigroviridis:263

L0PGV8              	100.00%		H3CY85              	100.00%
Bootstrap support for L0PGV8 as seed ortholog is 100%.
Bootstrap support for H3CY85 as seed ortholog is 100%.

Group of orthologs #568. Best score 262 bits
Score difference with first non-orthologous sequence - P.jiroveci:262 T.nigroviridis:150

L0PDR6              	100.00%		H3D599              	100.00%
                    	       		Q4RKV1              	75.29%
Bootstrap support for L0PDR6 as seed ortholog is 100%.
Bootstrap support for H3D599 as seed ortholog is 100%.

Group of orthologs #569. Best score 262 bits
Score difference with first non-orthologous sequence - P.jiroveci:46 T.nigroviridis:262

L0P720              	100.00%		H3CAE5              	100.00%
Bootstrap support for L0P720 as seed ortholog is 96%.
Bootstrap support for H3CAE5 as seed ortholog is 100%.

Group of orthologs #570. Best score 262 bits
Score difference with first non-orthologous sequence - P.jiroveci:262 T.nigroviridis:262

L0PAQ1              	100.00%		H3CCF3              	100.00%
Bootstrap support for L0PAQ1 as seed ortholog is 100%.
Bootstrap support for H3CCF3 as seed ortholog is 100%.

Group of orthologs #571. Best score 262 bits
Score difference with first non-orthologous sequence - P.jiroveci:262 T.nigroviridis:262

L0P7C4              	100.00%		H3D1F0              	100.00%
Bootstrap support for L0P7C4 as seed ortholog is 100%.
Bootstrap support for H3D1F0 as seed ortholog is 100%.

Group of orthologs #572. Best score 262 bits
Score difference with first non-orthologous sequence - P.jiroveci:262 T.nigroviridis:262

L0PEY5              	100.00%		H3DEQ6              	100.00%
Bootstrap support for L0PEY5 as seed ortholog is 100%.
Bootstrap support for H3DEQ6 as seed ortholog is 100%.

Group of orthologs #573. Best score 262 bits
Score difference with first non-orthologous sequence - P.jiroveci:216 T.nigroviridis:35

L0PC75              	100.00%		Q4S2G5              	100.00%
Bootstrap support for L0PC75 as seed ortholog is 100%.
Bootstrap support for Q4S2G5 as seed ortholog is 94%.

Group of orthologs #574. Best score 261 bits
Score difference with first non-orthologous sequence - P.jiroveci:261 T.nigroviridis:49

L0PDF9              	100.00%		H3DAV0              	100.00%
                    	       		H3DCF2              	65.92%
                    	       		H3CV91              	49.44%
                    	       		Q4RXA7              	49.00%
                    	       		Q4SJ66              	45.21%
                    	       		H3DCF3              	42.09%
                    	       		H3DEE9              	17.15%
                    	       		H3DDD7              	13.59%
                    	       		H3DEE8              	13.14%
                    	       		H3CQ31              	12.03%
                    	       		H3DDD8              	7.57%
Bootstrap support for L0PDF9 as seed ortholog is 100%.
Bootstrap support for H3DAV0 as seed ortholog is 93%.

Group of orthologs #575. Best score 261 bits
Score difference with first non-orthologous sequence - P.jiroveci:261 T.nigroviridis:133

L0PAM8              	100.00%		H3CAH0              	100.00%
Bootstrap support for L0PAM8 as seed ortholog is 100%.
Bootstrap support for H3CAH0 as seed ortholog is 99%.

Group of orthologs #576. Best score 260 bits
Score difference with first non-orthologous sequence - P.jiroveci:260 T.nigroviridis:260

L0PB11              	100.00%		H3D0E2              	100.00%
Bootstrap support for L0PB11 as seed ortholog is 100%.
Bootstrap support for H3D0E2 as seed ortholog is 100%.

Group of orthologs #577. Best score 259 bits
Score difference with first non-orthologous sequence - P.jiroveci:259 T.nigroviridis:259

L0PF73              	100.00%		H3CCU2              	100.00%
Bootstrap support for L0PF73 as seed ortholog is 100%.
Bootstrap support for H3CCU2 as seed ortholog is 100%.

Group of orthologs #578. Best score 259 bits
Score difference with first non-orthologous sequence - P.jiroveci:259 T.nigroviridis:259

L0PA72              	100.00%		H3CQA7              	100.00%
Bootstrap support for L0PA72 as seed ortholog is 100%.
Bootstrap support for H3CQA7 as seed ortholog is 100%.

Group of orthologs #579. Best score 259 bits
Score difference with first non-orthologous sequence - P.jiroveci:259 T.nigroviridis:259

L0PB86              	100.00%		H3DJ05              	100.00%
Bootstrap support for L0PB86 as seed ortholog is 100%.
Bootstrap support for H3DJ05 as seed ortholog is 100%.

Group of orthologs #580. Best score 258 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 T.nigroviridis:58

L0PGH8              	100.00%		H3CEA7              	100.00%
Bootstrap support for L0PGH8 as seed ortholog is 99%.
Bootstrap support for H3CEA7 as seed ortholog is 93%.

Group of orthologs #581. Best score 257 bits
Score difference with first non-orthologous sequence - P.jiroveci:257 T.nigroviridis:257

L0P6P2              	100.00%		H3C5N0              	100.00%
                    	       		Q4S0Z5              	44.14%
Bootstrap support for L0P6P2 as seed ortholog is 100%.
Bootstrap support for H3C5N0 as seed ortholog is 100%.

Group of orthologs #582. Best score 257 bits
Score difference with first non-orthologous sequence - P.jiroveci:257 T.nigroviridis:257

L0PAG8              	100.00%		H3DDZ3              	100.00%
Bootstrap support for L0PAG8 as seed ortholog is 100%.
Bootstrap support for H3DDZ3 as seed ortholog is 100%.

Group of orthologs #583. Best score 256 bits
Score difference with first non-orthologous sequence - P.jiroveci:256 T.nigroviridis:256

L0P7W4              	100.00%		H3C499              	100.00%
Bootstrap support for L0P7W4 as seed ortholog is 100%.
Bootstrap support for H3C499 as seed ortholog is 100%.

Group of orthologs #584. Best score 255 bits
Score difference with first non-orthologous sequence - P.jiroveci:255 T.nigroviridis:186

L0PBS3              	100.00%		H3CK30              	100.00%
Bootstrap support for L0PBS3 as seed ortholog is 100%.
Bootstrap support for H3CK30 as seed ortholog is 99%.

Group of orthologs #585. Best score 255 bits
Score difference with first non-orthologous sequence - P.jiroveci:255 T.nigroviridis:255

L0PFC0              	100.00%		H3CNC7              	100.00%
Bootstrap support for L0PFC0 as seed ortholog is 100%.
Bootstrap support for H3CNC7 as seed ortholog is 100%.

Group of orthologs #586. Best score 255 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 T.nigroviridis:67

L0P7S4              	100.00%		H3DE11              	100.00%
Bootstrap support for L0P7S4 as seed ortholog is 94%.
Bootstrap support for H3DE11 as seed ortholog is 90%.

Group of orthologs #587. Best score 255 bits
Score difference with first non-orthologous sequence - P.jiroveci:255 T.nigroviridis:255

L0PAM2              	100.00%		Q4TBS0              	100.00%
Bootstrap support for L0PAM2 as seed ortholog is 100%.
Bootstrap support for Q4TBS0 as seed ortholog is 100%.

Group of orthologs #588. Best score 253 bits
Score difference with first non-orthologous sequence - P.jiroveci:177 T.nigroviridis:253

L0PF24              	100.00%		H3DDM6              	100.00%
                    	       		H3D2I5              	85.81%
                    	       		Q4RX95              	83.95%
                    	       		H3D005              	81.86%
                    	       		H3CRG4              	60.93%
                    	       		H3CEN7              	42.79%
                    	       		H3CXZ5              	16.05%
Bootstrap support for L0PF24 as seed ortholog is 100%.
Bootstrap support for H3DDM6 as seed ortholog is 100%.

Group of orthologs #589. Best score 253 bits
Score difference with first non-orthologous sequence - P.jiroveci:253 T.nigroviridis:253

L0PAD9              	100.00%		H3D6T9              	100.00%
Bootstrap support for L0PAD9 as seed ortholog is 100%.
Bootstrap support for H3D6T9 as seed ortholog is 100%.

Group of orthologs #590. Best score 253 bits
Score difference with first non-orthologous sequence - P.jiroveci:253 T.nigroviridis:114

L0PAG1              	100.00%		H3D801              	100.00%
Bootstrap support for L0PAG1 as seed ortholog is 100%.
Bootstrap support for H3D801 as seed ortholog is 99%.

Group of orthologs #591. Best score 252 bits
Score difference with first non-orthologous sequence - P.jiroveci:252 T.nigroviridis:252

L0PDI2              	100.00%		H3C0Q7              	100.00%
Bootstrap support for L0PDI2 as seed ortholog is 100%.
Bootstrap support for H3C0Q7 as seed ortholog is 100%.

Group of orthologs #592. Best score 252 bits
Score difference with first non-orthologous sequence - P.jiroveci:165 T.nigroviridis:155

L0PFK0              	100.00%		H3CFC5              	100.00%
Bootstrap support for L0PFK0 as seed ortholog is 100%.
Bootstrap support for H3CFC5 as seed ortholog is 99%.

Group of orthologs #593. Best score 252 bits
Score difference with first non-orthologous sequence - P.jiroveci:252 T.nigroviridis:252

L0P9N8              	100.00%		H3DA11              	100.00%
Bootstrap support for L0P9N8 as seed ortholog is 100%.
Bootstrap support for H3DA11 as seed ortholog is 100%.

Group of orthologs #594. Best score 252 bits
Score difference with first non-orthologous sequence - P.jiroveci:252 T.nigroviridis:252

L0P9M9              	100.00%		H3DDX5              	100.00%
Bootstrap support for L0P9M9 as seed ortholog is 100%.
Bootstrap support for H3DDX5 as seed ortholog is 100%.

Group of orthologs #595. Best score 251 bits
Score difference with first non-orthologous sequence - P.jiroveci:112 T.nigroviridis:251

L0P8F3              	100.00%		H3CQ62              	100.00%
                    	       		H3D3L0              	47.82%
Bootstrap support for L0P8F3 as seed ortholog is 99%.
Bootstrap support for H3CQ62 as seed ortholog is 100%.

Group of orthologs #596. Best score 251 bits
Score difference with first non-orthologous sequence - P.jiroveci:251 T.nigroviridis:251

L0PHK5              	100.00%		H3CTL4              	100.00%
Bootstrap support for L0PHK5 as seed ortholog is 100%.
Bootstrap support for H3CTL4 as seed ortholog is 100%.

Group of orthologs #597. Best score 250 bits
Score difference with first non-orthologous sequence - P.jiroveci:250 T.nigroviridis:250

L0PBY9              	100.00%		Q4RJ32              	100.00%
Bootstrap support for L0PBY9 as seed ortholog is 100%.
Bootstrap support for Q4RJ32 as seed ortholog is 100%.

Group of orthologs #598. Best score 249 bits
Score difference with first non-orthologous sequence - P.jiroveci:249 T.nigroviridis:185

L0P895              	100.00%		H3DBB6              	100.00%
                    	       		H3DB10              	18.00%
Bootstrap support for L0P895 as seed ortholog is 100%.
Bootstrap support for H3DBB6 as seed ortholog is 100%.

Group of orthologs #599. Best score 248 bits
Score difference with first non-orthologous sequence - P.jiroveci:248 T.nigroviridis:76

L0P723              	100.00%		Q4RGI4              	100.00%
                    	       		H3CD74              	25.14%
Bootstrap support for L0P723 as seed ortholog is 100%.
Bootstrap support for Q4RGI4 as seed ortholog is 99%.

Group of orthologs #600. Best score 248 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 T.nigroviridis:107

L0PA17              	100.00%		H3CBF6              	100.00%
Bootstrap support for L0PA17 as seed ortholog is 100%.
Bootstrap support for H3CBF6 as seed ortholog is 99%.

Group of orthologs #601. Best score 248 bits
Score difference with first non-orthologous sequence - P.jiroveci:248 T.nigroviridis:248

L0PFX9              	100.00%		Q4RLG4              	100.00%
Bootstrap support for L0PFX9 as seed ortholog is 100%.
Bootstrap support for Q4RLG4 as seed ortholog is 100%.

Group of orthologs #602. Best score 247 bits
Score difference with first non-orthologous sequence - P.jiroveci:247 T.nigroviridis:247

L0PCU5              	100.00%		H3C2W1              	100.00%
Bootstrap support for L0PCU5 as seed ortholog is 100%.
Bootstrap support for H3C2W1 as seed ortholog is 100%.

Group of orthologs #603. Best score 247 bits
Score difference with first non-orthologous sequence - P.jiroveci:183 T.nigroviridis:247

L0PFY7              	100.00%		Q4SDS8              	100.00%
Bootstrap support for L0PFY7 as seed ortholog is 100%.
Bootstrap support for Q4SDS8 as seed ortholog is 100%.

Group of orthologs #604. Best score 246 bits
Score difference with first non-orthologous sequence - P.jiroveci:246 T.nigroviridis:246

L0PBG0              	100.00%		H3CZC3              	100.00%
Bootstrap support for L0PBG0 as seed ortholog is 100%.
Bootstrap support for H3CZC3 as seed ortholog is 100%.

Group of orthologs #605. Best score 246 bits
Score difference with first non-orthologous sequence - P.jiroveci:246 T.nigroviridis:246

L0P914              	100.00%		H3D6G7              	100.00%
Bootstrap support for L0P914 as seed ortholog is 100%.
Bootstrap support for H3D6G7 as seed ortholog is 100%.

Group of orthologs #606. Best score 246 bits
Score difference with first non-orthologous sequence - P.jiroveci:246 T.nigroviridis:246

L0PGQ4              	100.00%		H3D2G0              	100.00%
Bootstrap support for L0PGQ4 as seed ortholog is 100%.
Bootstrap support for H3D2G0 as seed ortholog is 100%.

Group of orthologs #607. Best score 246 bits
Score difference with first non-orthologous sequence - P.jiroveci:246 T.nigroviridis:246

L0PBH8              	100.00%		H3DD60              	100.00%
Bootstrap support for L0PBH8 as seed ortholog is 100%.
Bootstrap support for H3DD60 as seed ortholog is 100%.

Group of orthologs #608. Best score 246 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 T.nigroviridis:246

L0PAQ7              	100.00%		H3DM77              	100.00%
Bootstrap support for L0PAQ7 as seed ortholog is 97%.
Bootstrap support for H3DM77 as seed ortholog is 100%.

Group of orthologs #609. Best score 245 bits
Score difference with first non-orthologous sequence - P.jiroveci:245 T.nigroviridis:115

L0PDN4              	100.00%		H3CHR9              	100.00%
                    	       		H3C8I4              	32.53%
Bootstrap support for L0PDN4 as seed ortholog is 100%.
Bootstrap support for H3CHR9 as seed ortholog is 98%.

Group of orthologs #610. Best score 245 bits
Score difference with first non-orthologous sequence - P.jiroveci:245 T.nigroviridis:245

L0PG86              	100.00%		H3DGK2              	100.00%
                    	       		H3CD28              	14.52%
Bootstrap support for L0PG86 as seed ortholog is 100%.
Bootstrap support for H3DGK2 as seed ortholog is 100%.

Group of orthologs #611. Best score 245 bits
Score difference with first non-orthologous sequence - P.jiroveci:156 T.nigroviridis:62

L0P876              	100.00%		H3CII4              	100.00%
Bootstrap support for L0P876 as seed ortholog is 100%.
Bootstrap support for H3CII4 as seed ortholog is 99%.

Group of orthologs #612. Best score 245 bits
Score difference with first non-orthologous sequence - P.jiroveci:245 T.nigroviridis:245

L0PE74              	100.00%		H3CN93              	100.00%
Bootstrap support for L0PE74 as seed ortholog is 100%.
Bootstrap support for H3CN93 as seed ortholog is 100%.

Group of orthologs #613. Best score 245 bits
Score difference with first non-orthologous sequence - P.jiroveci:245 T.nigroviridis:142

L0PCQ6              	100.00%		H3CVC6              	100.00%
Bootstrap support for L0PCQ6 as seed ortholog is 100%.
Bootstrap support for H3CVC6 as seed ortholog is 100%.

Group of orthologs #614. Best score 245 bits
Score difference with first non-orthologous sequence - P.jiroveci:245 T.nigroviridis:245

L0PF44              	100.00%		Q4RFU2              	100.00%
Bootstrap support for L0PF44 as seed ortholog is 100%.
Bootstrap support for Q4RFU2 as seed ortholog is 100%.

Group of orthologs #615. Best score 243 bits
Score difference with first non-orthologous sequence - P.jiroveci:243 T.nigroviridis:243

L0P9F7              	100.00%		H3CK57              	100.00%
L0PGP0              	82.94%		
Bootstrap support for L0P9F7 as seed ortholog is 100%.
Bootstrap support for H3CK57 as seed ortholog is 100%.

Group of orthologs #616. Best score 243 bits
Score difference with first non-orthologous sequence - P.jiroveci:186 T.nigroviridis:134

L0PGN9              	100.00%		H3CSB2              	100.00%
Bootstrap support for L0PGN9 as seed ortholog is 100%.
Bootstrap support for H3CSB2 as seed ortholog is 99%.

Group of orthologs #617. Best score 243 bits
Score difference with first non-orthologous sequence - P.jiroveci:166 T.nigroviridis:243

L0PE17              	100.00%		H3D8A5              	100.00%
Bootstrap support for L0PE17 as seed ortholog is 100%.
Bootstrap support for H3D8A5 as seed ortholog is 100%.

Group of orthologs #618. Best score 242 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 T.nigroviridis:169

L0P858              	100.00%		H3DMM1              	100.00%
L0PDX5              	67.94%		
Bootstrap support for L0P858 as seed ortholog is 100%.
Bootstrap support for H3DMM1 as seed ortholog is 99%.

Group of orthologs #619. Best score 242 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 T.nigroviridis:242

L0P9J6              	100.00%		Q4RLI5              	100.00%
L0PH67              	86.72%		
Bootstrap support for L0P9J6 as seed ortholog is 100%.
Bootstrap support for Q4RLI5 as seed ortholog is 100%.

Group of orthologs #620. Best score 242 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 T.nigroviridis:167

L0PDT4              	100.00%		H3C115              	100.00%
Bootstrap support for L0PDT4 as seed ortholog is 100%.
Bootstrap support for H3C115 as seed ortholog is 99%.

Group of orthologs #621. Best score 242 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 T.nigroviridis:242

L0P9S7              	100.00%		H3CBP2              	100.00%
Bootstrap support for L0P9S7 as seed ortholog is 100%.
Bootstrap support for H3CBP2 as seed ortholog is 100%.

Group of orthologs #622. Best score 241 bits
Score difference with first non-orthologous sequence - P.jiroveci:241 T.nigroviridis:109

L0PEX1              	100.00%		H3D185              	100.00%
Bootstrap support for L0PEX1 as seed ortholog is 100%.
Bootstrap support for H3D185 as seed ortholog is 99%.

Group of orthologs #623. Best score 240 bits
Score difference with first non-orthologous sequence - P.jiroveci:240 T.nigroviridis:240

L0PCC1              	100.00%		H3CRJ8              	100.00%
Bootstrap support for L0PCC1 as seed ortholog is 100%.
Bootstrap support for H3CRJ8 as seed ortholog is 100%.

Group of orthologs #624. Best score 239 bits
Score difference with first non-orthologous sequence - P.jiroveci:239 T.nigroviridis:239

L0PDH2              	100.00%		Q4RSX0              	100.00%
Bootstrap support for L0PDH2 as seed ortholog is 100%.
Bootstrap support for Q4RSX0 as seed ortholog is 100%.

Group of orthologs #625. Best score 238 bits
Score difference with first non-orthologous sequence - P.jiroveci:238 T.nigroviridis:238

L0PID4              	100.00%		H3DI36              	100.00%
L0PGF7              	33.67%		
Bootstrap support for L0PID4 as seed ortholog is 100%.
Bootstrap support for H3DI36 as seed ortholog is 100%.

Group of orthologs #626. Best score 237 bits
Score difference with first non-orthologous sequence - P.jiroveci:237 T.nigroviridis:105

L0PEJ9              	100.00%		H3D712              	100.00%
Bootstrap support for L0PEJ9 as seed ortholog is 100%.
Bootstrap support for H3D712 as seed ortholog is 99%.

Group of orthologs #627. Best score 237 bits
Score difference with first non-orthologous sequence - P.jiroveci:237 T.nigroviridis:237

L0P8K8              	100.00%		H3DJM0              	100.00%
Bootstrap support for L0P8K8 as seed ortholog is 100%.
Bootstrap support for H3DJM0 as seed ortholog is 100%.

Group of orthologs #628. Best score 237 bits
Score difference with first non-orthologous sequence - P.jiroveci:237 T.nigroviridis:237

L0P7H2              	100.00%		Q4SGI0              	100.00%
Bootstrap support for L0P7H2 as seed ortholog is 100%.
Bootstrap support for Q4SGI0 as seed ortholog is 100%.

Group of orthologs #629. Best score 236 bits
Score difference with first non-orthologous sequence - P.jiroveci:236 T.nigroviridis:236

L0PBC7              	100.00%		H3BYY5              	100.00%
Bootstrap support for L0PBC7 as seed ortholog is 100%.
Bootstrap support for H3BYY5 as seed ortholog is 100%.

Group of orthologs #630. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 T.nigroviridis:235

L0PCG1              	100.00%		H3CPZ3              	100.00%
Bootstrap support for L0PCG1 as seed ortholog is 100%.
Bootstrap support for H3CPZ3 as seed ortholog is 100%.

Group of orthologs #631. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 T.nigroviridis:235

L0P8F0              	100.00%		H3D386              	100.00%
Bootstrap support for L0P8F0 as seed ortholog is 100%.
Bootstrap support for H3D386 as seed ortholog is 100%.

Group of orthologs #632. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 T.nigroviridis:235

L0PEM0              	100.00%		H3D051              	100.00%
Bootstrap support for L0PEM0 as seed ortholog is 100%.
Bootstrap support for H3D051 as seed ortholog is 100%.

Group of orthologs #633. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 T.nigroviridis:235

L0P9K2              	100.00%		H3DER6              	100.00%
Bootstrap support for L0P9K2 as seed ortholog is 100%.
Bootstrap support for H3DER6 as seed ortholog is 100%.

Group of orthologs #634. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 T.nigroviridis:235

L0PD44              	100.00%		H3DAC4              	100.00%
Bootstrap support for L0PD44 as seed ortholog is 100%.
Bootstrap support for H3DAC4 as seed ortholog is 100%.

Group of orthologs #635. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 T.nigroviridis:235

L0P896              	100.00%		Q4SM54              	100.00%
Bootstrap support for L0P896 as seed ortholog is 100%.
Bootstrap support for Q4SM54 as seed ortholog is 100%.

Group of orthologs #636. Best score 234 bits
Score difference with first non-orthologous sequence - P.jiroveci:234 T.nigroviridis:49

L0PET2              	100.00%		H3CDI1              	100.00%
L0PAE5              	85.62%		Q4RIV0              	16.61%
Bootstrap support for L0PET2 as seed ortholog is 100%.
Bootstrap support for H3CDI1 as seed ortholog is 96%.

Group of orthologs #637. Best score 234 bits
Score difference with first non-orthologous sequence - P.jiroveci:234 T.nigroviridis:234

L0PEC6              	100.00%		H3DIE4              	100.00%
Bootstrap support for L0PEC6 as seed ortholog is 100%.
Bootstrap support for H3DIE4 as seed ortholog is 100%.

Group of orthologs #638. Best score 234 bits
Score difference with first non-orthologous sequence - P.jiroveci:145 T.nigroviridis:133

L0P9F9              	100.00%		Q4SV04              	100.00%
Bootstrap support for L0P9F9 as seed ortholog is 100%.
Bootstrap support for Q4SV04 as seed ortholog is 100%.

Group of orthologs #639. Best score 233 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 T.nigroviridis:50

L0PGE5              	100.00%		Q4SWJ4              	100.00%
                    	       		Q4RXL7              	89.44%
                    	       		Q4RW89              	79.50%
                    	       		H3DLP6              	79.50%
                    	       		H3C926              	51.55%
Bootstrap support for L0PGE5 as seed ortholog is 99%.
Bootstrap support for Q4SWJ4 as seed ortholog is 99%.

Group of orthologs #640. Best score 233 bits
Score difference with first non-orthologous sequence - P.jiroveci:233 T.nigroviridis:233

L0PD38              	100.00%		H3CGK1              	100.00%
                    	       		H3BYY7              	30.77%
Bootstrap support for L0PD38 as seed ortholog is 100%.
Bootstrap support for H3CGK1 as seed ortholog is 100%.

Group of orthologs #641. Best score 233 bits
Score difference with first non-orthologous sequence - P.jiroveci:233 T.nigroviridis:233

L0PEN7              	100.00%		H3CG24              	100.00%
Bootstrap support for L0PEN7 as seed ortholog is 100%.
Bootstrap support for H3CG24 as seed ortholog is 100%.

Group of orthologs #642. Best score 232 bits
Score difference with first non-orthologous sequence - P.jiroveci:232 T.nigroviridis:232

L0PGD7              	100.00%		H3CZS3              	100.00%
L0PGQ0              	62.07%		
Bootstrap support for L0PGD7 as seed ortholog is 100%.
Bootstrap support for H3CZS3 as seed ortholog is 100%.

Group of orthologs #643. Best score 232 bits
Score difference with first non-orthologous sequence - P.jiroveci:232 T.nigroviridis:232

L0PHL1              	100.00%		H3C9J8              	100.00%
Bootstrap support for L0PHL1 as seed ortholog is 100%.
Bootstrap support for H3C9J8 as seed ortholog is 100%.

Group of orthologs #644. Best score 232 bits
Score difference with first non-orthologous sequence - P.jiroveci:232 T.nigroviridis:168

L0P834              	100.00%		H3D7L8              	100.00%
Bootstrap support for L0P834 as seed ortholog is 100%.
Bootstrap support for H3D7L8 as seed ortholog is 100%.

Group of orthologs #645. Best score 232 bits
Score difference with first non-orthologous sequence - P.jiroveci:232 T.nigroviridis:232

L0PBA4              	100.00%		H3DN67              	100.00%
Bootstrap support for L0PBA4 as seed ortholog is 100%.
Bootstrap support for H3DN67 as seed ortholog is 100%.

Group of orthologs #646. Best score 232 bits
Score difference with first non-orthologous sequence - P.jiroveci:232 T.nigroviridis:232

L0PGN8              	100.00%		H3DN87              	100.00%
Bootstrap support for L0PGN8 as seed ortholog is 100%.
Bootstrap support for H3DN87 as seed ortholog is 100%.

Group of orthologs #647. Best score 232 bits
Score difference with first non-orthologous sequence - P.jiroveci:232 T.nigroviridis:232

L0PEQ4              	100.00%		Q4SK90              	100.00%
Bootstrap support for L0PEQ4 as seed ortholog is 100%.
Bootstrap support for Q4SK90 as seed ortholog is 100%.

Group of orthologs #648. Best score 231 bits
Score difference with first non-orthologous sequence - P.jiroveci:157 T.nigroviridis:69

L0PHH9              	100.00%		H3D1K7              	100.00%
                    	       		H3CCW3              	67.48%
                    	       		H3CT22              	52.03%
Bootstrap support for L0PHH9 as seed ortholog is 100%.
Bootstrap support for H3D1K7 as seed ortholog is 99%.

Group of orthologs #649. Best score 231 bits
Score difference with first non-orthologous sequence - P.jiroveci:231 T.nigroviridis:231

L0PE58              	100.00%		H3CBA4              	100.00%
Bootstrap support for L0PE58 as seed ortholog is 100%.
Bootstrap support for H3CBA4 as seed ortholog is 100%.

Group of orthologs #650. Best score 231 bits
Score difference with first non-orthologous sequence - P.jiroveci:231 T.nigroviridis:231

L0PHL0              	100.00%		H3D367              	100.00%
Bootstrap support for L0PHL0 as seed ortholog is 100%.
Bootstrap support for H3D367 as seed ortholog is 100%.

Group of orthologs #651. Best score 231 bits
Score difference with first non-orthologous sequence - P.jiroveci:231 T.nigroviridis:231

L0PH55              	100.00%		H3D7E3              	100.00%
Bootstrap support for L0PH55 as seed ortholog is 100%.
Bootstrap support for H3D7E3 as seed ortholog is 100%.

Group of orthologs #652. Best score 230 bits
Score difference with first non-orthologous sequence - P.jiroveci:230 T.nigroviridis:115

L0P705              	100.00%		H3D2H4              	100.00%
Bootstrap support for L0P705 as seed ortholog is 100%.
Bootstrap support for H3D2H4 as seed ortholog is 99%.

Group of orthologs #653. Best score 230 bits
Score difference with first non-orthologous sequence - P.jiroveci:230 T.nigroviridis:230

L0PG68              	100.00%		H3CR85              	100.00%
Bootstrap support for L0PG68 as seed ortholog is 100%.
Bootstrap support for H3CR85 as seed ortholog is 100%.

Group of orthologs #654. Best score 229 bits
Score difference with first non-orthologous sequence - P.jiroveci:229 T.nigroviridis:61

L0PCI8              	100.00%		H3CZ84              	100.00%
                    	       		H3DE81              	53.74%
                    	       		H3CQE9              	27.75%
Bootstrap support for L0PCI8 as seed ortholog is 100%.
Bootstrap support for H3CZ84 as seed ortholog is 96%.

Group of orthologs #655. Best score 229 bits
Score difference with first non-orthologous sequence - P.jiroveci:229 T.nigroviridis:229

L0PCH0              	100.00%		H3DES5              	100.00%
                    	       		H3D8F4              	29.39%
Bootstrap support for L0PCH0 as seed ortholog is 100%.
Bootstrap support for H3DES5 as seed ortholog is 100%.

Group of orthologs #656. Best score 228 bits
Score difference with first non-orthologous sequence - P.jiroveci:228 T.nigroviridis:228

L0PAJ0              	100.00%		H3C6T4              	100.00%
                    	       		H3C7W4              	40.43%
Bootstrap support for L0PAJ0 as seed ortholog is 100%.
Bootstrap support for H3C6T4 as seed ortholog is 100%.

Group of orthologs #657. Best score 228 bits
Score difference with first non-orthologous sequence - P.jiroveci:228 T.nigroviridis:118

L0PFZ1              	100.00%		H3CIZ5              	100.00%
                    	       		H3C0T7              	38.71%
Bootstrap support for L0PFZ1 as seed ortholog is 100%.
Bootstrap support for H3CIZ5 as seed ortholog is 99%.

Group of orthologs #658. Best score 228 bits
Score difference with first non-orthologous sequence - P.jiroveci:228 T.nigroviridis:228

L0P949              	100.00%		H3CH66              	100.00%
Bootstrap support for L0P949 as seed ortholog is 100%.
Bootstrap support for H3CH66 as seed ortholog is 100%.

Group of orthologs #659. Best score 228 bits
Score difference with first non-orthologous sequence - P.jiroveci:228 T.nigroviridis:103

L0P9R7              	100.00%		H3CP24              	100.00%
Bootstrap support for L0P9R7 as seed ortholog is 100%.
Bootstrap support for H3CP24 as seed ortholog is 99%.

Group of orthologs #660. Best score 227 bits
Score difference with first non-orthologous sequence - P.jiroveci:227 T.nigroviridis:227

L0PBZ1              	100.00%		H3CA33              	100.00%
Bootstrap support for L0PBZ1 as seed ortholog is 100%.
Bootstrap support for H3CA33 as seed ortholog is 100%.

Group of orthologs #661. Best score 227 bits
Score difference with first non-orthologous sequence - P.jiroveci:227 T.nigroviridis:227

L0P9C4              	100.00%		H3CIW2              	100.00%
Bootstrap support for L0P9C4 as seed ortholog is 100%.
Bootstrap support for H3CIW2 as seed ortholog is 100%.

Group of orthologs #662. Best score 227 bits
Score difference with first non-orthologous sequence - P.jiroveci:227 T.nigroviridis:227

L0P9N2              	100.00%		H3CSB5              	100.00%
Bootstrap support for L0P9N2 as seed ortholog is 100%.
Bootstrap support for H3CSB5 as seed ortholog is 100%.

Group of orthologs #663. Best score 226 bits
Score difference with first non-orthologous sequence - P.jiroveci:226 T.nigroviridis:156

L0PDB9              	100.00%		H3D076              	100.00%
                    	       		H3DHB4              	28.76%
Bootstrap support for L0PDB9 as seed ortholog is 100%.
Bootstrap support for H3D076 as seed ortholog is 99%.

Group of orthologs #664. Best score 226 bits
Score difference with first non-orthologous sequence - P.jiroveci:226 T.nigroviridis:226

L0PB28              	100.00%		H3D3C7              	100.00%
Bootstrap support for L0PB28 as seed ortholog is 100%.
Bootstrap support for H3D3C7 as seed ortholog is 100%.

Group of orthologs #665. Best score 225 bits
Score difference with first non-orthologous sequence - P.jiroveci:225 T.nigroviridis:225

L0PI61              	100.00%		H3DLN1              	100.00%
L0PA50              	18.21%		H3DID2              	57.16%
                    	       		H3DNK9              	48.99%
Bootstrap support for L0PI61 as seed ortholog is 100%.
Bootstrap support for H3DLN1 as seed ortholog is 100%.

Group of orthologs #666. Best score 225 bits
Score difference with first non-orthologous sequence - P.jiroveci:225 T.nigroviridis:225

L0PBZ6              	100.00%		H3CCQ6              	100.00%
Bootstrap support for L0PBZ6 as seed ortholog is 100%.
Bootstrap support for H3CCQ6 as seed ortholog is 100%.

Group of orthologs #667. Best score 225 bits
Score difference with first non-orthologous sequence - P.jiroveci:225 T.nigroviridis:225

L0PEW5              	100.00%		H3CE76              	100.00%
Bootstrap support for L0PEW5 as seed ortholog is 100%.
Bootstrap support for H3CE76 as seed ortholog is 100%.

Group of orthologs #668. Best score 225 bits
Score difference with first non-orthologous sequence - P.jiroveci:225 T.nigroviridis:139

L0P9I3              	100.00%		H3DCQ6              	100.00%
Bootstrap support for L0P9I3 as seed ortholog is 100%.
Bootstrap support for H3DCQ6 as seed ortholog is 100%.

Group of orthologs #669. Best score 225 bits
Score difference with first non-orthologous sequence - P.jiroveci:225 T.nigroviridis:225

L0PBN2              	100.00%		H3DD75              	100.00%
Bootstrap support for L0PBN2 as seed ortholog is 100%.
Bootstrap support for H3DD75 as seed ortholog is 100%.

Group of orthologs #670. Best score 225 bits
Score difference with first non-orthologous sequence - P.jiroveci:225 T.nigroviridis:65

L0P8S1              	100.00%		H3DR48              	100.00%
Bootstrap support for L0P8S1 as seed ortholog is 100%.
Bootstrap support for H3DR48 as seed ortholog is 97%.

Group of orthologs #671. Best score 225 bits
Score difference with first non-orthologous sequence - P.jiroveci:225 T.nigroviridis:225

L0PGY0              	100.00%		Q4SJL7              	100.00%
Bootstrap support for L0PGY0 as seed ortholog is 100%.
Bootstrap support for Q4SJL7 as seed ortholog is 100%.

Group of orthologs #672. Best score 224 bits
Score difference with first non-orthologous sequence - P.jiroveci:224 T.nigroviridis:224

L0PA92              	100.00%		H3D1D1              	100.00%
L0P8X8              	40.87%		H3D004              	50.17%
Bootstrap support for L0PA92 as seed ortholog is 100%.
Bootstrap support for H3D1D1 as seed ortholog is 100%.

Group of orthologs #673. Best score 224 bits
Score difference with first non-orthologous sequence - P.jiroveci:224 T.nigroviridis:224

L0PGD6              	100.00%		H3CCH9              	100.00%
Bootstrap support for L0PGD6 as seed ortholog is 100%.
Bootstrap support for H3CCH9 as seed ortholog is 100%.

Group of orthologs #674. Best score 224 bits
Score difference with first non-orthologous sequence - P.jiroveci:224 T.nigroviridis:224

L0PDP2              	100.00%		H3CLV6              	100.00%
Bootstrap support for L0PDP2 as seed ortholog is 100%.
Bootstrap support for H3CLV6 as seed ortholog is 100%.

Group of orthologs #675. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:135 T.nigroviridis:107

L0PFE3              	100.00%		H3CYT2              	100.00%
                    	       		H3DJM3              	100.00%
                    	       		H3CRK7              	31.41%
                    	       		H3CQ73              	13.72%
Bootstrap support for L0PFE3 as seed ortholog is 99%.
Bootstrap support for H3CYT2 as seed ortholog is 99%.
Bootstrap support for H3DJM3 as seed ortholog is 99%.

Group of orthologs #676. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 T.nigroviridis:223

L0P9Q8              	100.00%		H3CMQ7              	100.00%
                    	       		H3D9J8              	100.00%
Bootstrap support for L0P9Q8 as seed ortholog is 100%.
Bootstrap support for H3CMQ7 as seed ortholog is 100%.
Bootstrap support for H3D9J8 as seed ortholog is 100%.

Group of orthologs #677. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 T.nigroviridis:223

L0P9L7              	100.00%		H3CAM6              	100.00%
Bootstrap support for L0P9L7 as seed ortholog is 100%.
Bootstrap support for H3CAM6 as seed ortholog is 100%.

Group of orthologs #678. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 T.nigroviridis:223

L0PGD9              	100.00%		H3CZ92              	100.00%
Bootstrap support for L0PGD9 as seed ortholog is 100%.
Bootstrap support for H3CZ92 as seed ortholog is 100%.

Group of orthologs #679. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 T.nigroviridis:223

L0PBS5              	100.00%		Q4T9W7              	100.00%
Bootstrap support for L0PBS5 as seed ortholog is 100%.
Bootstrap support for Q4T9W7 as seed ortholog is 100%.

Group of orthologs #680. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 T.nigroviridis:223

L0PG39              	100.00%		Q4RR37              	100.00%
Bootstrap support for L0PG39 as seed ortholog is 100%.
Bootstrap support for Q4RR37 as seed ortholog is 100%.

Group of orthologs #681. Best score 222 bits
Score difference with first non-orthologous sequence - P.jiroveci:222 T.nigroviridis:117

L0PE53              	100.00%		H3C9A9              	100.00%
                    	       		H3DE35              	32.68%
Bootstrap support for L0PE53 as seed ortholog is 100%.
Bootstrap support for H3C9A9 as seed ortholog is 99%.

Group of orthologs #682. Best score 222 bits
Score difference with first non-orthologous sequence - P.jiroveci:222 T.nigroviridis:222

L0PBP9              	100.00%		H3BYZ1              	100.00%
Bootstrap support for L0PBP9 as seed ortholog is 100%.
Bootstrap support for H3BYZ1 as seed ortholog is 100%.

Group of orthologs #683. Best score 221 bits
Score difference with first non-orthologous sequence - P.jiroveci:221 T.nigroviridis:221

L0PAZ5              	100.00%		H3CS01              	100.00%
Bootstrap support for L0PAZ5 as seed ortholog is 100%.
Bootstrap support for H3CS01 as seed ortholog is 100%.

Group of orthologs #684. Best score 221 bits
Score difference with first non-orthologous sequence - P.jiroveci:221 T.nigroviridis:150

L0PB84              	100.00%		H3D9G3              	100.00%
Bootstrap support for L0PB84 as seed ortholog is 100%.
Bootstrap support for H3D9G3 as seed ortholog is 100%.

Group of orthologs #685. Best score 220 bits
Score difference with first non-orthologous sequence - P.jiroveci:220 T.nigroviridis:220

L0P9B8              	100.00%		H3CRN2              	100.00%
Bootstrap support for L0P9B8 as seed ortholog is 100%.
Bootstrap support for H3CRN2 as seed ortholog is 100%.

Group of orthologs #686. Best score 220 bits
Score difference with first non-orthologous sequence - P.jiroveci:220 T.nigroviridis:125

L0PE77              	100.00%		H3CV23              	100.00%
Bootstrap support for L0PE77 as seed ortholog is 100%.
Bootstrap support for H3CV23 as seed ortholog is 100%.

Group of orthologs #687. Best score 220 bits
Score difference with first non-orthologous sequence - P.jiroveci:220 T.nigroviridis:46

L0P967              	100.00%		H3DGU9              	100.00%
Bootstrap support for L0P967 as seed ortholog is 100%.
Bootstrap support for H3DGU9 as seed ortholog is 87%.

Group of orthologs #688. Best score 219 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 T.nigroviridis:219

L0PD58              	100.00%		H3C3T4              	100.00%
Bootstrap support for L0PD58 as seed ortholog is 99%.
Bootstrap support for H3C3T4 as seed ortholog is 100%.

Group of orthologs #689. Best score 219 bits
Score difference with first non-orthologous sequence - P.jiroveci:219 T.nigroviridis:219

L0PAE8              	100.00%		H3D0G4              	100.00%
Bootstrap support for L0PAE8 as seed ortholog is 100%.
Bootstrap support for H3D0G4 as seed ortholog is 100%.

Group of orthologs #690. Best score 219 bits
Score difference with first non-orthologous sequence - P.jiroveci:219 T.nigroviridis:219

L0P9Y7              	100.00%		H3DA39              	100.00%
Bootstrap support for L0P9Y7 as seed ortholog is 100%.
Bootstrap support for H3DA39 as seed ortholog is 100%.

Group of orthologs #691. Best score 218 bits
Score difference with first non-orthologous sequence - P.jiroveci:218 T.nigroviridis:218

L0P849              	100.00%		Q4THN8              	100.00%
Bootstrap support for L0P849 as seed ortholog is 100%.
Bootstrap support for Q4THN8 as seed ortholog is 100%.

Group of orthologs #692. Best score 218 bits
Score difference with first non-orthologous sequence - P.jiroveci:218 T.nigroviridis:218

L0PDX6              	100.00%		Q4SIH0              	100.00%
Bootstrap support for L0PDX6 as seed ortholog is 100%.
Bootstrap support for Q4SIH0 as seed ortholog is 100%.

Group of orthologs #693. Best score 217 bits
Score difference with first non-orthologous sequence - P.jiroveci:217 T.nigroviridis:217

L0P9G0              	100.00%		H3BWJ1              	100.00%
                    	       		H3D5C7              	40.26%
                    	       		H3DBV7              	37.16%
                    	       		H3CD03              	23.87%
                    	       		H3DBC1              	22.81%
                    	       		H3D277              	22.36%
                    	       		H3D2C1              	21.45%
                    	       		H3DK53              	21.15%
                    	       		H3C6P4              	20.32%
                    	       		H3C8R9              	14.65%
                    	       		H3C055              	12.84%
                    	       		H3CWV7              	9.37%
                    	       		H3CA47              	8.69%
                    	       		H3CZG2              	5.82%
                    	       		H3DJB0              	5.51%
Bootstrap support for L0P9G0 as seed ortholog is 100%.
Bootstrap support for H3BWJ1 as seed ortholog is 100%.

Group of orthologs #694. Best score 217 bits
Score difference with first non-orthologous sequence - P.jiroveci:167 T.nigroviridis:94

L0PAF0              	100.00%		H3DLX4              	100.00%
                    	       		H3D120              	36.67%
Bootstrap support for L0PAF0 as seed ortholog is 99%.
Bootstrap support for H3DLX4 as seed ortholog is 99%.

Group of orthologs #695. Best score 217 bits
Score difference with first non-orthologous sequence - P.jiroveci:217 T.nigroviridis:217

L0PCJ8              	100.00%		H3C2F8              	100.00%
Bootstrap support for L0PCJ8 as seed ortholog is 100%.
Bootstrap support for H3C2F8 as seed ortholog is 100%.

Group of orthologs #696. Best score 217 bits
Score difference with first non-orthologous sequence - P.jiroveci:217 T.nigroviridis:217

L0PGT2              	100.00%		H3C356              	100.00%
Bootstrap support for L0PGT2 as seed ortholog is 100%.
Bootstrap support for H3C356 as seed ortholog is 100%.

Group of orthologs #697. Best score 216 bits
Score difference with first non-orthologous sequence - P.jiroveci:216 T.nigroviridis:216

L0PG10              	100.00%		H3D5I6              	100.00%
Bootstrap support for L0PG10 as seed ortholog is 100%.
Bootstrap support for H3D5I6 as seed ortholog is 100%.

Group of orthologs #698. Best score 216 bits
Score difference with first non-orthologous sequence - P.jiroveci:216 T.nigroviridis:44

L0PIP5              	100.00%		H3DD48              	100.00%
Bootstrap support for L0PIP5 as seed ortholog is 100%.
Bootstrap support for H3DD48 as seed ortholog is 85%.

Group of orthologs #699. Best score 215 bits
Score difference with first non-orthologous sequence - P.jiroveci:154 T.nigroviridis:93

L0PHW8              	100.00%		Q4SBK4              	100.00%
                    	       		Q4S3D4              	93.12%
                    	       		H3D6M7              	91.28%
                    	       		Q4TGT4              	79.36%
                    	       		H3CHM7              	11.01%
Bootstrap support for L0PHW8 as seed ortholog is 100%.
Bootstrap support for Q4SBK4 as seed ortholog is 99%.

Group of orthologs #700. Best score 215 bits
Score difference with first non-orthologous sequence - P.jiroveci:36 T.nigroviridis:70

L0PFI0              	100.00%		H3CT00              	100.00%
                    	       		H3CIC7              	47.22%
Bootstrap support for L0PFI0 as seed ortholog is 80%.
Bootstrap support for H3CT00 as seed ortholog is 95%.

Group of orthologs #701. Best score 215 bits
Score difference with first non-orthologous sequence - P.jiroveci:215 T.nigroviridis:137

L0PAW4              	100.00%		H3CP58              	100.00%
Bootstrap support for L0PAW4 as seed ortholog is 100%.
Bootstrap support for H3CP58 as seed ortholog is 99%.

Group of orthologs #702. Best score 215 bits
Score difference with first non-orthologous sequence - P.jiroveci:215 T.nigroviridis:215

L0PFE6              	100.00%		H3D1Y5              	100.00%
Bootstrap support for L0PFE6 as seed ortholog is 100%.
Bootstrap support for H3D1Y5 as seed ortholog is 100%.

Group of orthologs #703. Best score 215 bits
Score difference with first non-orthologous sequence - P.jiroveci:215 T.nigroviridis:215

L0PFL8              	100.00%		Q4T8S6              	100.00%
Bootstrap support for L0PFL8 as seed ortholog is 100%.
Bootstrap support for Q4T8S6 as seed ortholog is 100%.

Group of orthologs #704. Best score 214 bits
Score difference with first non-orthologous sequence - P.jiroveci:214 T.nigroviridis:214

L0PF99              	100.00%		H3D813              	100.00%
                    	       		H3D2D0              	30.74%
Bootstrap support for L0PF99 as seed ortholog is 100%.
Bootstrap support for H3D813 as seed ortholog is 100%.

Group of orthologs #705. Best score 214 bits
Score difference with first non-orthologous sequence - P.jiroveci:214 T.nigroviridis:214

L0PDL6              	100.00%		H3CGV3              	100.00%
Bootstrap support for L0PDL6 as seed ortholog is 100%.
Bootstrap support for H3CGV3 as seed ortholog is 100%.

Group of orthologs #706. Best score 214 bits
Score difference with first non-orthologous sequence - P.jiroveci:214 T.nigroviridis:214

L0P8J0              	100.00%		H3D989              	100.00%
Bootstrap support for L0P8J0 as seed ortholog is 100%.
Bootstrap support for H3D989 as seed ortholog is 100%.

Group of orthologs #707. Best score 214 bits
Score difference with first non-orthologous sequence - P.jiroveci:153 T.nigroviridis:155

L0PDB2              	100.00%		H3D6Y5              	100.00%
Bootstrap support for L0PDB2 as seed ortholog is 99%.
Bootstrap support for H3D6Y5 as seed ortholog is 99%.

Group of orthologs #708. Best score 213 bits
Score difference with first non-orthologous sequence - P.jiroveci:213 T.nigroviridis:213

L0PAA3              	100.00%		H3BY10              	100.00%
                    	       		H3CSB7              	46.49%
                    	       		H3C3K5              	21.30%
Bootstrap support for L0PAA3 as seed ortholog is 100%.
Bootstrap support for H3BY10 as seed ortholog is 100%.

Group of orthologs #709. Best score 213 bits
Score difference with first non-orthologous sequence - P.jiroveci:213 T.nigroviridis:90

L0P848              	100.00%		H3D5P9              	100.00%
L0P867              	89.81%		
Bootstrap support for L0P848 as seed ortholog is 100%.
Bootstrap support for H3D5P9 as seed ortholog is 98%.

Group of orthologs #710. Best score 213 bits
Score difference with first non-orthologous sequence - P.jiroveci:213 T.nigroviridis:79

L0PGL3              	100.00%		H3D639              	100.00%
                    	       		Q4S0B3              	25.38%
Bootstrap support for L0PGL3 as seed ortholog is 100%.
Bootstrap support for H3D639 as seed ortholog is 96%.

Group of orthologs #711. Best score 213 bits
Score difference with first non-orthologous sequence - P.jiroveci:213 T.nigroviridis:82

L0PG76              	100.00%		H3DGV2              	100.00%
L0PE70              	51.43%		
Bootstrap support for L0PG76 as seed ortholog is 100%.
Bootstrap support for H3DGV2 as seed ortholog is 98%.

Group of orthologs #712. Best score 213 bits
Score difference with first non-orthologous sequence - P.jiroveci:213 T.nigroviridis:213

L0PDS2              	100.00%		H3BYT4              	100.00%
Bootstrap support for L0PDS2 as seed ortholog is 100%.
Bootstrap support for H3BYT4 as seed ortholog is 100%.

Group of orthologs #713. Best score 213 bits
Score difference with first non-orthologous sequence - P.jiroveci:213 T.nigroviridis:97

L0P8Q5              	100.00%		H3DFM6              	100.00%
Bootstrap support for L0P8Q5 as seed ortholog is 100%.
Bootstrap support for H3DFM6 as seed ortholog is 98%.

Group of orthologs #714. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:212 T.nigroviridis:65

L0PCJ7              	100.00%		H3CTC0              	100.00%
                    	       		H3CGS9              	50.30%
                    	       		H3DNS2              	38.34%
                    	       		H3C304              	36.33%
                    	       		H3BW05              	6.32%
Bootstrap support for L0PCJ7 as seed ortholog is 100%.
Bootstrap support for H3CTC0 as seed ortholog is 95%.

Group of orthologs #715. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:212 T.nigroviridis:152

L0PBL5              	100.00%		H3D5U3              	100.00%
                    	       		H3DH18              	12.83%
Bootstrap support for L0PBL5 as seed ortholog is 100%.
Bootstrap support for H3D5U3 as seed ortholog is 99%.

Group of orthologs #716. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:212 T.nigroviridis:212

L0PDL5              	100.00%		H3DFT2              	100.00%
                    	       		H3C3S2              	65.45%
Bootstrap support for L0PDL5 as seed ortholog is 100%.
Bootstrap support for H3DFT2 as seed ortholog is 100%.

Group of orthologs #717. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:212 T.nigroviridis:212

L0PG81              	100.00%		H3CG20              	100.00%
Bootstrap support for L0PG81 as seed ortholog is 100%.
Bootstrap support for H3CG20 as seed ortholog is 100%.

Group of orthologs #718. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:212 T.nigroviridis:212

L0PBT0              	100.00%		H3CRI5              	100.00%
Bootstrap support for L0PBT0 as seed ortholog is 100%.
Bootstrap support for H3CRI5 as seed ortholog is 100%.

Group of orthologs #719. Best score 211 bits
Score difference with first non-orthologous sequence - P.jiroveci:116 T.nigroviridis:40

L0PCN5              	100.00%		H3CK38              	100.00%
L0P7B6              	92.61%		
Bootstrap support for L0PCN5 as seed ortholog is 99%.
Bootstrap support for H3CK38 as seed ortholog is 85%.

Group of orthologs #720. Best score 211 bits
Score difference with first non-orthologous sequence - P.jiroveci:142 T.nigroviridis:211

L0P9G1              	100.00%		H3C3N4              	100.00%
Bootstrap support for L0P9G1 as seed ortholog is 99%.
Bootstrap support for H3C3N4 as seed ortholog is 100%.

Group of orthologs #721. Best score 211 bits
Score difference with first non-orthologous sequence - P.jiroveci:211 T.nigroviridis:90

L0PE21              	100.00%		H3CFA7              	100.00%
Bootstrap support for L0PE21 as seed ortholog is 100%.
Bootstrap support for H3CFA7 as seed ortholog is 99%.

Group of orthologs #722. Best score 210 bits
Score difference with first non-orthologous sequence - P.jiroveci:102 T.nigroviridis:84

L0PFN2              	100.00%		H3CDX1              	100.00%
                    	       		H3CQN4              	100.00%
                    	       		H3DI88              	100.00%
Bootstrap support for L0PFN2 as seed ortholog is 100%.
Bootstrap support for H3CDX1 as seed ortholog is 100%.
Bootstrap support for H3CQN4 as seed ortholog is 100%.
Bootstrap support for H3DI88 as seed ortholog is 100%.

Group of orthologs #723. Best score 210 bits
Score difference with first non-orthologous sequence - P.jiroveci:210 T.nigroviridis:210

L0PAR5              	100.00%		H3CMT0              	100.00%
Bootstrap support for L0PAR5 as seed ortholog is 100%.
Bootstrap support for H3CMT0 as seed ortholog is 100%.

Group of orthologs #724. Best score 210 bits
Score difference with first non-orthologous sequence - P.jiroveci:210 T.nigroviridis:210

L0PA86              	100.00%		H3CZ32              	100.00%
Bootstrap support for L0PA86 as seed ortholog is 100%.
Bootstrap support for H3CZ32 as seed ortholog is 100%.

Group of orthologs #725. Best score 210 bits
Score difference with first non-orthologous sequence - P.jiroveci:210 T.nigroviridis:210

L0PFR9              	100.00%		H3CYY4              	100.00%
Bootstrap support for L0PFR9 as seed ortholog is 100%.
Bootstrap support for H3CYY4 as seed ortholog is 100%.

Group of orthologs #726. Best score 210 bits
Score difference with first non-orthologous sequence - P.jiroveci:210 T.nigroviridis:50

L0PDB8              	100.00%		Q4S823              	100.00%
Bootstrap support for L0PDB8 as seed ortholog is 100%.
Bootstrap support for Q4S823 as seed ortholog is 94%.

Group of orthologs #727. Best score 209 bits
Score difference with first non-orthologous sequence - P.jiroveci:26 T.nigroviridis:56

L0PGT4              	100.00%		H3DB73              	100.00%
                    	       		H3DF06              	59.03%
                    	       		H3C1W1              	14.06%
                    	       		Q4T2N1              	13.37%
                    	       		H3D7X4              	6.08%
                    	       		H3CQ86              	6.08%
Bootstrap support for L0PGT4 as seed ortholog is 74%.
Alternative seed ortholog is L0PDN2 (26 bits away from this cluster)
Bootstrap support for H3DB73 as seed ortholog is 93%.

Group of orthologs #728. Best score 209 bits
Score difference with first non-orthologous sequence - P.jiroveci:209 T.nigroviridis:209

L0P910              	100.00%		H3CTJ8              	100.00%
Bootstrap support for L0P910 as seed ortholog is 100%.
Bootstrap support for H3CTJ8 as seed ortholog is 100%.

Group of orthologs #729. Best score 209 bits
Score difference with first non-orthologous sequence - P.jiroveci:209 T.nigroviridis:108

L0PF53              	100.00%		H3DII2              	100.00%
Bootstrap support for L0PF53 as seed ortholog is 100%.
Bootstrap support for H3DII2 as seed ortholog is 99%.

Group of orthologs #730. Best score 208 bits
Score difference with first non-orthologous sequence - P.jiroveci:208 T.nigroviridis:208

L0PD65              	100.00%		H3CXQ3              	100.00%
                    	       		Q4TBZ1              	25.19%
                    	       		H3CMF9              	5.34%
Bootstrap support for L0PD65 as seed ortholog is 100%.
Bootstrap support for H3CXQ3 as seed ortholog is 100%.

Group of orthologs #731. Best score 208 bits
Score difference with first non-orthologous sequence - P.jiroveci:208 T.nigroviridis:208

L0PFI8              	100.00%		H3C4B5              	100.00%
Bootstrap support for L0PFI8 as seed ortholog is 100%.
Bootstrap support for H3C4B5 as seed ortholog is 100%.

Group of orthologs #732. Best score 207 bits
Score difference with first non-orthologous sequence - P.jiroveci:207 T.nigroviridis:207

L0P9I2              	100.00%		H3CAW4              	100.00%
Bootstrap support for L0P9I2 as seed ortholog is 100%.
Bootstrap support for H3CAW4 as seed ortholog is 100%.

Group of orthologs #733. Best score 207 bits
Score difference with first non-orthologous sequence - P.jiroveci:207 T.nigroviridis:207

L0PAC1              	100.00%		H3C9W0              	100.00%
Bootstrap support for L0PAC1 as seed ortholog is 100%.
Bootstrap support for H3C9W0 as seed ortholog is 100%.

Group of orthologs #734. Best score 207 bits
Score difference with first non-orthologous sequence - P.jiroveci:207 T.nigroviridis:207

L0PCB3              	100.00%		H3DDN7              	100.00%
Bootstrap support for L0PCB3 as seed ortholog is 100%.
Bootstrap support for H3DDN7 as seed ortholog is 100%.

Group of orthologs #735. Best score 207 bits
Score difference with first non-orthologous sequence - P.jiroveci:207 T.nigroviridis:207

L0P9D6              	100.00%		Q4SKF6              	100.00%
Bootstrap support for L0P9D6 as seed ortholog is 100%.
Bootstrap support for Q4SKF6 as seed ortholog is 100%.

Group of orthologs #736. Best score 207 bits
Score difference with first non-orthologous sequence - P.jiroveci:207 T.nigroviridis:207

L0PB66              	100.00%		Q4S7R4              	100.00%
Bootstrap support for L0PB66 as seed ortholog is 100%.
Bootstrap support for Q4S7R4 as seed ortholog is 100%.

Group of orthologs #737. Best score 206 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 T.nigroviridis:50

L0P8M4              	100.00%		H3CQN7              	100.00%
                    	       		H3DJY9              	68.40%
                    	       		H3CUG1              	18.61%
Bootstrap support for L0P8M4 as seed ortholog is 100%.
Bootstrap support for H3CQN7 as seed ortholog is 97%.

Group of orthologs #738. Best score 206 bits
Score difference with first non-orthologous sequence - P.jiroveci:206 T.nigroviridis:206

L0PE89              	100.00%		H3CBZ8              	100.00%
Bootstrap support for L0PE89 as seed ortholog is 100%.
Bootstrap support for H3CBZ8 as seed ortholog is 100%.

Group of orthologs #739. Best score 206 bits
Score difference with first non-orthologous sequence - P.jiroveci:206 T.nigroviridis:206

L0PET8              	100.00%		H3CPH7              	100.00%
Bootstrap support for L0PET8 as seed ortholog is 100%.
Bootstrap support for H3CPH7 as seed ortholog is 100%.

Group of orthologs #740. Best score 206 bits
Score difference with first non-orthologous sequence - P.jiroveci:206 T.nigroviridis:206

L0PCU0              	100.00%		Q4SGE5              	100.00%
Bootstrap support for L0PCU0 as seed ortholog is 100%.
Bootstrap support for Q4SGE5 as seed ortholog is 100%.

Group of orthologs #741. Best score 205 bits
Score difference with first non-orthologous sequence - P.jiroveci:205 T.nigroviridis:205

L0PBN7              	100.00%		H3CUZ2              	100.00%
Bootstrap support for L0PBN7 as seed ortholog is 100%.
Bootstrap support for H3CUZ2 as seed ortholog is 100%.

Group of orthologs #742. Best score 205 bits
Score difference with first non-orthologous sequence - P.jiroveci:205 T.nigroviridis:205

L0PFS1              	100.00%		H3D3H9              	100.00%
Bootstrap support for L0PFS1 as seed ortholog is 100%.
Bootstrap support for H3D3H9 as seed ortholog is 100%.

Group of orthologs #743. Best score 205 bits
Score difference with first non-orthologous sequence - P.jiroveci:205 T.nigroviridis:138

L0PFU0              	100.00%		H3DBY0              	100.00%
Bootstrap support for L0PFU0 as seed ortholog is 100%.
Bootstrap support for H3DBY0 as seed ortholog is 99%.

Group of orthologs #744. Best score 204 bits
Score difference with first non-orthologous sequence - P.jiroveci:204 T.nigroviridis:204

L0P901              	100.00%		H3CVK9              	100.00%
Bootstrap support for L0P901 as seed ortholog is 100%.
Bootstrap support for H3CVK9 as seed ortholog is 100%.

Group of orthologs #745. Best score 203 bits
Score difference with first non-orthologous sequence - P.jiroveci:203 T.nigroviridis:203

L0PFW4              	100.00%		H3CPM0              	100.00%
Bootstrap support for L0PFW4 as seed ortholog is 100%.
Bootstrap support for H3CPM0 as seed ortholog is 100%.

Group of orthologs #746. Best score 203 bits
Score difference with first non-orthologous sequence - P.jiroveci:203 T.nigroviridis:203

L0PEL2              	100.00%		H3D283              	100.00%
Bootstrap support for L0PEL2 as seed ortholog is 100%.
Bootstrap support for H3D283 as seed ortholog is 100%.

Group of orthologs #747. Best score 203 bits
Score difference with first non-orthologous sequence - P.jiroveci:203 T.nigroviridis:203

L0PFP0              	100.00%		H3DQ01              	100.00%
Bootstrap support for L0PFP0 as seed ortholog is 100%.
Bootstrap support for H3DQ01 as seed ortholog is 100%.

Group of orthologs #748. Best score 201 bits
Score difference with first non-orthologous sequence - P.jiroveci:201 T.nigroviridis:201

L0PFN0              	100.00%		H3CE75              	100.00%
Bootstrap support for L0PFN0 as seed ortholog is 100%.
Bootstrap support for H3CE75 as seed ortholog is 100%.

Group of orthologs #749. Best score 201 bits
Score difference with first non-orthologous sequence - P.jiroveci:201 T.nigroviridis:201

L0PBE8              	100.00%		H3D8W1              	100.00%
Bootstrap support for L0PBE8 as seed ortholog is 100%.
Bootstrap support for H3D8W1 as seed ortholog is 100%.

Group of orthologs #750. Best score 201 bits
Score difference with first non-orthologous sequence - P.jiroveci:201 T.nigroviridis:201

L0PB31              	100.00%		H3DGD0              	100.00%
Bootstrap support for L0PB31 as seed ortholog is 100%.
Bootstrap support for H3DGD0 as seed ortholog is 100%.

Group of orthologs #751. Best score 201 bits
Score difference with first non-orthologous sequence - P.jiroveci:201 T.nigroviridis:201

L0PCH6              	100.00%		H3DHA5              	100.00%
Bootstrap support for L0PCH6 as seed ortholog is 100%.
Bootstrap support for H3DHA5 as seed ortholog is 100%.

Group of orthologs #752. Best score 200 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 T.nigroviridis:99

L0P7B1              	100.00%		H3DF91              	100.00%
                    	       		H3DE92              	76.32%
Bootstrap support for L0P7B1 as seed ortholog is 100%.
Bootstrap support for H3DF91 as seed ortholog is 100%.

Group of orthologs #753. Best score 200 bits
Score difference with first non-orthologous sequence - P.jiroveci:200 T.nigroviridis:200

L0P968              	100.00%		H3D5G9              	100.00%
Bootstrap support for L0P968 as seed ortholog is 100%.
Bootstrap support for H3D5G9 as seed ortholog is 100%.

Group of orthologs #754. Best score 199 bits
Score difference with first non-orthologous sequence - P.jiroveci:199 T.nigroviridis:36

L0PC02              	100.00%		H3BXX4              	100.00%
                    	       		H3DLW5              	40.55%
                    	       		H3DD95              	37.55%
Bootstrap support for L0PC02 as seed ortholog is 100%.
Bootstrap support for H3BXX4 as seed ortholog is 79%.

Group of orthologs #755. Best score 199 bits
Score difference with first non-orthologous sequence - P.jiroveci:199 T.nigroviridis:23

L0PBC8              	100.00%		H3CGN8              	100.00%
Bootstrap support for L0PBC8 as seed ortholog is 100%.
Bootstrap support for H3CGN8 as seed ortholog is 76%.

Group of orthologs #756. Best score 199 bits
Score difference with first non-orthologous sequence - P.jiroveci:199 T.nigroviridis:5

L0PFJ7              	100.00%		H3CI02              	100.00%
Bootstrap support for L0PFJ7 as seed ortholog is 100%.
Bootstrap support for H3CI02 as seed ortholog is 53%.
Alternative seed ortholog is H3D687 (5 bits away from this cluster)

Group of orthologs #757. Best score 199 bits
Score difference with first non-orthologous sequence - P.jiroveci:199 T.nigroviridis:199

L0P7L9              	100.00%		H3DKT1              	100.00%
Bootstrap support for L0P7L9 as seed ortholog is 100%.
Bootstrap support for H3DKT1 as seed ortholog is 100%.

Group of orthologs #758. Best score 199 bits
Score difference with first non-orthologous sequence - P.jiroveci:199 T.nigroviridis:98

L0PA51              	100.00%		Q4SFE2              	100.00%
Bootstrap support for L0PA51 as seed ortholog is 100%.
Bootstrap support for Q4SFE2 as seed ortholog is 99%.

Group of orthologs #759. Best score 198 bits
Score difference with first non-orthologous sequence - P.jiroveci:198 T.nigroviridis:198

L0PB94              	100.00%		H3C5A3              	100.00%
                    	       		H3DMS4              	40.36%
                    	       		H3DFV5              	37.98%
Bootstrap support for L0PB94 as seed ortholog is 100%.
Bootstrap support for H3C5A3 as seed ortholog is 100%.

Group of orthologs #760. Best score 198 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 T.nigroviridis:67

L0PG51              	100.00%		H3CWJ7              	100.00%
Bootstrap support for L0PG51 as seed ortholog is 97%.
Bootstrap support for H3CWJ7 as seed ortholog is 99%.

Group of orthologs #761. Best score 198 bits
Score difference with first non-orthologous sequence - P.jiroveci:198 T.nigroviridis:198

L0P8P0              	100.00%		H3DCM8              	100.00%
Bootstrap support for L0P8P0 as seed ortholog is 100%.
Bootstrap support for H3DCM8 as seed ortholog is 100%.

Group of orthologs #762. Best score 198 bits
Score difference with first non-orthologous sequence - P.jiroveci:198 T.nigroviridis:198

L0PBM3              	100.00%		H3DMR7              	100.00%
Bootstrap support for L0PBM3 as seed ortholog is 100%.
Bootstrap support for H3DMR7 as seed ortholog is 100%.

Group of orthologs #763. Best score 197 bits
Score difference with first non-orthologous sequence - P.jiroveci:197 T.nigroviridis:197

L0PDJ6              	100.00%		Q4RJG4              	100.00%
                    	       		H3CTA2              	33.10%
                    	       		H3CXB7              	28.02%
Bootstrap support for L0PDJ6 as seed ortholog is 100%.
Bootstrap support for Q4RJG4 as seed ortholog is 100%.

Group of orthologs #764. Best score 197 bits
Score difference with first non-orthologous sequence - P.jiroveci:197 T.nigroviridis:197

L0PD35              	100.00%		H3CL91              	100.00%
Bootstrap support for L0PD35 as seed ortholog is 100%.
Bootstrap support for H3CL91 as seed ortholog is 100%.

Group of orthologs #765. Best score 197 bits
Score difference with first non-orthologous sequence - P.jiroveci:197 T.nigroviridis:51

L0PCY2              	100.00%		H3CZJ3              	100.00%
Bootstrap support for L0PCY2 as seed ortholog is 100%.
Bootstrap support for H3CZJ3 as seed ortholog is 90%.

Group of orthologs #766. Best score 197 bits
Score difference with first non-orthologous sequence - P.jiroveci:197 T.nigroviridis:197

L0PD76              	100.00%		H3D349              	100.00%
Bootstrap support for L0PD76 as seed ortholog is 100%.
Bootstrap support for H3D349 as seed ortholog is 100%.

Group of orthologs #767. Best score 197 bits
Score difference with first non-orthologous sequence - P.jiroveci:197 T.nigroviridis:197

L0PFV3              	100.00%		H3D4C4              	100.00%
Bootstrap support for L0PFV3 as seed ortholog is 100%.
Bootstrap support for H3D4C4 as seed ortholog is 100%.

Group of orthologs #768. Best score 197 bits
Score difference with first non-orthologous sequence - P.jiroveci:197 T.nigroviridis:197

L0PHH2              	100.00%		H3D3A6              	100.00%
Bootstrap support for L0PHH2 as seed ortholog is 100%.
Bootstrap support for H3D3A6 as seed ortholog is 100%.

Group of orthologs #769. Best score 196 bits
Score difference with first non-orthologous sequence - P.jiroveci:196 T.nigroviridis:124

L0PC50              	100.00%		H3CYV2              	100.00%
Bootstrap support for L0PC50 as seed ortholog is 100%.
Bootstrap support for H3CYV2 as seed ortholog is 98%.

Group of orthologs #770. Best score 195 bits
Score difference with first non-orthologous sequence - P.jiroveci:114 T.nigroviridis:195

L0PFD8              	100.00%		H3DJE8              	100.00%
                    	       		H3DAU6              	24.08%
Bootstrap support for L0PFD8 as seed ortholog is 99%.
Bootstrap support for H3DJE8 as seed ortholog is 100%.

Group of orthologs #771. Best score 195 bits
Score difference with first non-orthologous sequence - P.jiroveci:195 T.nigroviridis:118

L0PB17              	100.00%		H3CX34              	100.00%
Bootstrap support for L0PB17 as seed ortholog is 100%.
Bootstrap support for H3CX34 as seed ortholog is 100%.

Group of orthologs #772. Best score 195 bits
Score difference with first non-orthologous sequence - P.jiroveci:195 T.nigroviridis:122

L0PBD5              	100.00%		H3DCR4              	100.00%
Bootstrap support for L0PBD5 as seed ortholog is 100%.
Bootstrap support for H3DCR4 as seed ortholog is 99%.

Group of orthologs #773. Best score 194 bits
Score difference with first non-orthologous sequence - P.jiroveci:194 T.nigroviridis:105

L0PF75              	100.00%		H3CM63              	100.00%
Bootstrap support for L0PF75 as seed ortholog is 100%.
Bootstrap support for H3CM63 as seed ortholog is 99%.

Group of orthologs #774. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:132 T.nigroviridis:65

L0PCC3              	100.00%		H3D274              	100.00%
                    	       		H3D2C4              	100.00%
                    	       		H3CUX2              	86.97%
                    	       		H3CDS4              	78.40%
                    	       		H3CML4              	44.96%
Bootstrap support for L0PCC3 as seed ortholog is 100%.
Bootstrap support for H3D274 as seed ortholog is 99%.
Bootstrap support for H3D2C4 as seed ortholog is 99%.

Group of orthologs #775. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:193 T.nigroviridis:193

L0PGV2              	100.00%		H3CCJ2              	100.00%
L0PG40              	64.25%		
Bootstrap support for L0PGV2 as seed ortholog is 100%.
Bootstrap support for H3CCJ2 as seed ortholog is 100%.

Group of orthologs #776. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:193 T.nigroviridis:193

L0P6S2              	100.00%		H3CRD8              	100.00%
Bootstrap support for L0P6S2 as seed ortholog is 100%.
Bootstrap support for H3CRD8 as seed ortholog is 100%.

Group of orthologs #777. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:193 T.nigroviridis:193

L0PDJ4              	100.00%		H3D4S7              	100.00%
Bootstrap support for L0PDJ4 as seed ortholog is 100%.
Bootstrap support for H3D4S7 as seed ortholog is 100%.

Group of orthologs #778. Best score 192 bits
Score difference with first non-orthologous sequence - P.jiroveci:93 T.nigroviridis:25

L0PAY4              	100.00%		H3CTN8              	100.00%
                    	       		H3DNP6              	100.00%
                    	       		Q4RFZ8              	90.20%
                    	       		H3D2G2              	86.27%
                    	       		H3BZD9              	72.55%
Bootstrap support for L0PAY4 as seed ortholog is 100%.
Bootstrap support for H3CTN8 as seed ortholog is 94%.
Bootstrap support for H3DNP6 as seed ortholog is 94%.

Group of orthologs #779. Best score 192 bits
Score difference with first non-orthologous sequence - P.jiroveci:192 T.nigroviridis:192

L0PGC4              	100.00%		H3CBU5              	100.00%
Bootstrap support for L0PGC4 as seed ortholog is 100%.
Bootstrap support for H3CBU5 as seed ortholog is 100%.

Group of orthologs #780. Best score 192 bits
Score difference with first non-orthologous sequence - P.jiroveci:192 T.nigroviridis:192

L0P9Z4              	100.00%		H3CQ25              	100.00%
Bootstrap support for L0P9Z4 as seed ortholog is 100%.
Bootstrap support for H3CQ25 as seed ortholog is 100%.

Group of orthologs #781. Best score 192 bits
Score difference with first non-orthologous sequence - P.jiroveci:192 T.nigroviridis:192

L0P9P0              	100.00%		H3DHS4              	100.00%
Bootstrap support for L0P9P0 as seed ortholog is 100%.
Bootstrap support for H3DHS4 as seed ortholog is 100%.

Group of orthologs #782. Best score 192 bits
Score difference with first non-orthologous sequence - P.jiroveci:192 T.nigroviridis:192

L0PE85              	100.00%		Q4T9N8              	100.00%
Bootstrap support for L0PE85 as seed ortholog is 100%.
Bootstrap support for Q4T9N8 as seed ortholog is 100%.

Group of orthologs #783. Best score 192 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 T.nigroviridis:49

L0PGT3              	100.00%		Q4S0U5              	100.00%
Bootstrap support for L0PGT3 as seed ortholog is 100%.
Bootstrap support for Q4S0U5 as seed ortholog is 98%.

Group of orthologs #784. Best score 191 bits
Score difference with first non-orthologous sequence - P.jiroveci:191 T.nigroviridis:191

L0PBL3              	100.00%		H3DCP3              	100.00%
                    	       		H3DAS6              	38.11%
                    	       		H3DDX8              	29.37%
Bootstrap support for L0PBL3 as seed ortholog is 100%.
Bootstrap support for H3DCP3 as seed ortholog is 100%.

Group of orthologs #785. Best score 191 bits
Score difference with first non-orthologous sequence - P.jiroveci:191 T.nigroviridis:191

L0PBB0              	100.00%		H3CP84              	100.00%
                    	       		H3CPE4              	10.49%
Bootstrap support for L0PBB0 as seed ortholog is 100%.
Bootstrap support for H3CP84 as seed ortholog is 100%.

Group of orthologs #786. Best score 191 bits
Score difference with first non-orthologous sequence - P.jiroveci:191 T.nigroviridis:191

L0PFH3              	100.00%		H3C3Q5              	100.00%
Bootstrap support for L0PFH3 as seed ortholog is 100%.
Bootstrap support for H3C3Q5 as seed ortholog is 100%.

Group of orthologs #787. Best score 191 bits
Score difference with first non-orthologous sequence - P.jiroveci:191 T.nigroviridis:191

L0PG84              	100.00%		H3DBE9              	100.00%
Bootstrap support for L0PG84 as seed ortholog is 100%.
Bootstrap support for H3DBE9 as seed ortholog is 100%.

Group of orthologs #788. Best score 191 bits
Score difference with first non-orthologous sequence - P.jiroveci:191 T.nigroviridis:191

L0PC96              	100.00%		Q4SIB7              	100.00%
Bootstrap support for L0PC96 as seed ortholog is 100%.
Bootstrap support for Q4SIB7 as seed ortholog is 100%.

Group of orthologs #789. Best score 190 bits
Score difference with first non-orthologous sequence - P.jiroveci:190 T.nigroviridis:190

L0P784              	100.00%		H3CEV9              	100.00%
Bootstrap support for L0P784 as seed ortholog is 100%.
Bootstrap support for H3CEV9 as seed ortholog is 100%.

Group of orthologs #790. Best score 190 bits
Score difference with first non-orthologous sequence - P.jiroveci:190 T.nigroviridis:190

L0PC53              	100.00%		H3CLL9              	100.00%
Bootstrap support for L0PC53 as seed ortholog is 100%.
Bootstrap support for H3CLL9 as seed ortholog is 100%.

Group of orthologs #791. Best score 190 bits
Score difference with first non-orthologous sequence - P.jiroveci:190 T.nigroviridis:116

L0PGJ6              	100.00%		H3CL89              	100.00%
Bootstrap support for L0PGJ6 as seed ortholog is 100%.
Bootstrap support for H3CL89 as seed ortholog is 99%.

Group of orthologs #792. Best score 190 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 T.nigroviridis:99

L0PDS3              	100.00%		Q4S5D5              	100.00%
Bootstrap support for L0PDS3 as seed ortholog is 98%.
Bootstrap support for Q4S5D5 as seed ortholog is 99%.

Group of orthologs #793. Best score 189 bits
Score difference with first non-orthologous sequence - P.jiroveci:189 T.nigroviridis:189

L0PGJ8              	100.00%		H3CCT0              	100.00%
Bootstrap support for L0PGJ8 as seed ortholog is 100%.
Bootstrap support for H3CCT0 as seed ortholog is 100%.

Group of orthologs #794. Best score 189 bits
Score difference with first non-orthologous sequence - P.jiroveci:189 T.nigroviridis:81

L0P9Z5              	100.00%		H3CWA8              	100.00%
Bootstrap support for L0P9Z5 as seed ortholog is 100%.
Bootstrap support for H3CWA8 as seed ortholog is 96%.

Group of orthologs #795. Best score 188 bits
Score difference with first non-orthologous sequence - P.jiroveci:188 T.nigroviridis:53

L0PAP9              	100.00%		H3CVT5              	100.00%
                    	       		H3C362              	30.53%
Bootstrap support for L0PAP9 as seed ortholog is 100%.
Bootstrap support for H3CVT5 as seed ortholog is 99%.

Group of orthologs #796. Best score 188 bits
Score difference with first non-orthologous sequence - P.jiroveci:188 T.nigroviridis:188

L0PC20              	100.00%		H3CVQ6              	100.00%
                    	       		H3DLI3              	26.53%
Bootstrap support for L0PC20 as seed ortholog is 100%.
Bootstrap support for H3CVQ6 as seed ortholog is 100%.

Group of orthologs #797. Best score 188 bits
Score difference with first non-orthologous sequence - P.jiroveci:188 T.nigroviridis:28

L0PAJ6              	100.00%		H3CJA8              	100.00%
Bootstrap support for L0PAJ6 as seed ortholog is 100%.
Bootstrap support for H3CJA8 as seed ortholog is 84%.

Group of orthologs #798. Best score 188 bits
Score difference with first non-orthologous sequence - P.jiroveci:188 T.nigroviridis:188

L0PFH7              	100.00%		H3D4C1              	100.00%
Bootstrap support for L0PFH7 as seed ortholog is 100%.
Bootstrap support for H3D4C1 as seed ortholog is 100%.

Group of orthologs #799. Best score 188 bits
Score difference with first non-orthologous sequence - P.jiroveci:188 T.nigroviridis:188

L0P8C3              	100.00%		H3DGH0              	100.00%
Bootstrap support for L0P8C3 as seed ortholog is 100%.
Bootstrap support for H3DGH0 as seed ortholog is 100%.

Group of orthologs #800. Best score 188 bits
Score difference with first non-orthologous sequence - P.jiroveci:188 T.nigroviridis:188

L0PGG0              	100.00%		H3D944              	100.00%
Bootstrap support for L0PGG0 as seed ortholog is 100%.
Bootstrap support for H3D944 as seed ortholog is 100%.

Group of orthologs #801. Best score 187 bits
Score difference with first non-orthologous sequence - P.jiroveci:132 T.nigroviridis:50

L0PIS9              	100.00%		H3DBP6              	100.00%
                    	       		Q4SM11              	63.00%
                    	       		H3DLT7              	39.21%
                    	       		H3DP78              	39.21%
                    	       		H3D201              	7.93%
                    	       		Q4SBL3              	7.93%
                    	       		Q4RL52              	6.61%
                    	       		H3CJ01              	6.17%
                    	       		H3C6P1              	5.73%
Bootstrap support for L0PIS9 as seed ortholog is 100%.
Bootstrap support for H3DBP6 as seed ortholog is 95%.

Group of orthologs #802. Best score 187 bits
Score difference with first non-orthologous sequence - P.jiroveci:187 T.nigroviridis:187

L0PFK7              	100.00%		H3CYX3              	100.00%
                    	       		H3CPR9              	73.56%
Bootstrap support for L0PFK7 as seed ortholog is 100%.
Bootstrap support for H3CYX3 as seed ortholog is 100%.

Group of orthologs #803. Best score 187 bits
Score difference with first non-orthologous sequence - P.jiroveci:187 T.nigroviridis:80

L0PE03              	100.00%		H3CHL4              	100.00%
Bootstrap support for L0PE03 as seed ortholog is 100%.
Bootstrap support for H3CHL4 as seed ortholog is 99%.

Group of orthologs #804. Best score 187 bits
Score difference with first non-orthologous sequence - P.jiroveci:187 T.nigroviridis:187

L0P9I0              	100.00%		H3D293              	100.00%
Bootstrap support for L0P9I0 as seed ortholog is 100%.
Bootstrap support for H3D293 as seed ortholog is 100%.

Group of orthologs #805. Best score 186 bits
Score difference with first non-orthologous sequence - P.jiroveci:186 T.nigroviridis:186

L0PCF4              	100.00%		H3CMC4              	100.00%
L0P926              	62.10%		
Bootstrap support for L0PCF4 as seed ortholog is 100%.
Bootstrap support for H3CMC4 as seed ortholog is 100%.

Group of orthologs #806. Best score 186 bits
Score difference with first non-orthologous sequence - P.jiroveci:186 T.nigroviridis:186

L0PCV5              	100.00%		H3BXR2              	100.00%
Bootstrap support for L0PCV5 as seed ortholog is 100%.
Bootstrap support for H3BXR2 as seed ortholog is 100%.

Group of orthologs #807. Best score 186 bits
Score difference with first non-orthologous sequence - P.jiroveci:186 T.nigroviridis:95

L0PEH9              	100.00%		H3CG73              	100.00%
Bootstrap support for L0PEH9 as seed ortholog is 100%.
Bootstrap support for H3CG73 as seed ortholog is 99%.

Group of orthologs #808. Best score 186 bits
Score difference with first non-orthologous sequence - P.jiroveci:186 T.nigroviridis:56

L0PFQ4              	100.00%		H3DDS8              	100.00%
Bootstrap support for L0PFQ4 as seed ortholog is 100%.
Bootstrap support for H3DDS8 as seed ortholog is 99%.

Group of orthologs #809. Best score 186 bits
Score difference with first non-orthologous sequence - P.jiroveci:186 T.nigroviridis:134

L0PE97              	100.00%		Q4SVD2              	100.00%
Bootstrap support for L0PE97 as seed ortholog is 100%.
Bootstrap support for Q4SVD2 as seed ortholog is 100%.

Group of orthologs #810. Best score 184 bits
Score difference with first non-orthologous sequence - P.jiroveci:112 T.nigroviridis:106

L0PD33              	100.00%		H3CW14              	100.00%
                    	       		H3DH61              	40.22%
Bootstrap support for L0PD33 as seed ortholog is 99%.
Bootstrap support for H3CW14 as seed ortholog is 99%.

Group of orthologs #811. Best score 184 bits
Score difference with first non-orthologous sequence - P.jiroveci:184 T.nigroviridis:92

L0PBL1              	100.00%		Q4SLW2              	100.00%
                    	       		H3CVZ0              	81.17%
Bootstrap support for L0PBL1 as seed ortholog is 100%.
Bootstrap support for Q4SLW2 as seed ortholog is 99%.

Group of orthologs #812. Best score 184 bits
Score difference with first non-orthologous sequence - P.jiroveci:184 T.nigroviridis:184

L0PBK8              	100.00%		H3BVY4              	100.00%
Bootstrap support for L0PBK8 as seed ortholog is 100%.
Bootstrap support for H3BVY4 as seed ortholog is 100%.

Group of orthologs #813. Best score 183 bits
Score difference with first non-orthologous sequence - P.jiroveci:183 T.nigroviridis:127

L0P919              	100.00%		H3CLE6              	100.00%
Bootstrap support for L0P919 as seed ortholog is 100%.
Bootstrap support for H3CLE6 as seed ortholog is 99%.

Group of orthologs #814. Best score 183 bits
Score difference with first non-orthologous sequence - P.jiroveci:183 T.nigroviridis:183

L0P8C9              	100.00%		H3D521              	100.00%
Bootstrap support for L0P8C9 as seed ortholog is 100%.
Bootstrap support for H3D521 as seed ortholog is 100%.

Group of orthologs #815. Best score 183 bits
Score difference with first non-orthologous sequence - P.jiroveci:183 T.nigroviridis:183

L0PDV6              	100.00%		H3DC63              	100.00%
Bootstrap support for L0PDV6 as seed ortholog is 100%.
Bootstrap support for H3DC63 as seed ortholog is 100%.

Group of orthologs #816. Best score 183 bits
Score difference with first non-orthologous sequence - P.jiroveci:183 T.nigroviridis:183

L0PAR2              	100.00%		H3DP56              	100.00%
Bootstrap support for L0PAR2 as seed ortholog is 100%.
Bootstrap support for H3DP56 as seed ortholog is 100%.

Group of orthologs #817. Best score 182 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 T.nigroviridis:55

L0PAS2              	100.00%		H3D3M2              	100.00%
                    	       		H3DMA3              	66.14%
Bootstrap support for L0PAS2 as seed ortholog is 100%.
Bootstrap support for H3D3M2 as seed ortholog is 98%.

Group of orthologs #818. Best score 182 bits
Score difference with first non-orthologous sequence - P.jiroveci:182 T.nigroviridis:182

L0PDW5              	100.00%		H3DEL0              	100.00%
                    	       		H3CUK0              	42.11%
Bootstrap support for L0PDW5 as seed ortholog is 100%.
Bootstrap support for H3DEL0 as seed ortholog is 100%.

Group of orthologs #819. Best score 182 bits
Score difference with first non-orthologous sequence - P.jiroveci:182 T.nigroviridis:16

L0PA00              	100.00%		H3CB72              	100.00%
Bootstrap support for L0PA00 as seed ortholog is 100%.
Bootstrap support for H3CB72 as seed ortholog is 65%.
Alternative seed ortholog is H3CQY2 (16 bits away from this cluster)

Group of orthologs #820. Best score 182 bits
Score difference with first non-orthologous sequence - P.jiroveci:182 T.nigroviridis:182

L0PCF8              	100.00%		H3CUC0              	100.00%
Bootstrap support for L0PCF8 as seed ortholog is 100%.
Bootstrap support for H3CUC0 as seed ortholog is 100%.

Group of orthologs #821. Best score 181 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 T.nigroviridis:80

L0PDL7              	100.00%		H3CFY0              	100.00%
                    	       		H3CBZ9              	42.66%
                    	       		H3D1L6              	17.48%
                    	       		H3D153              	9.09%
Bootstrap support for L0PDL7 as seed ortholog is 100%.
Bootstrap support for H3CFY0 as seed ortholog is 100%.

Group of orthologs #822. Best score 181 bits
Score difference with first non-orthologous sequence - P.jiroveci:181 T.nigroviridis:181

L0PG23              	100.00%		H3DB97              	100.00%
Bootstrap support for L0PG23 as seed ortholog is 100%.
Bootstrap support for H3DB97 as seed ortholog is 100%.

Group of orthologs #823. Best score 181 bits
Score difference with first non-orthologous sequence - P.jiroveci:181 T.nigroviridis:181

L0P8V3              	100.00%		H3DNM1              	100.00%
Bootstrap support for L0P8V3 as seed ortholog is 100%.
Bootstrap support for H3DNM1 as seed ortholog is 100%.

Group of orthologs #824. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 T.nigroviridis:180

L0PBL8              	100.00%		H3CFR3              	100.00%
L0PDU3              	68.54%		
Bootstrap support for L0PBL8 as seed ortholog is 100%.
Bootstrap support for H3CFR3 as seed ortholog is 100%.

Group of orthologs #825. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:130 T.nigroviridis:97

L0PAZ8              	100.00%		H3CLE0              	100.00%
Bootstrap support for L0PAZ8 as seed ortholog is 99%.
Bootstrap support for H3CLE0 as seed ortholog is 99%.

Group of orthologs #826. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 T.nigroviridis:180

L0PFC3              	100.00%		H3DEF9              	100.00%
Bootstrap support for L0PFC3 as seed ortholog is 100%.
Bootstrap support for H3DEF9 as seed ortholog is 100%.

Group of orthologs #827. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 T.nigroviridis:180

L0PBD4              	100.00%		H3DLC6              	100.00%
Bootstrap support for L0PBD4 as seed ortholog is 100%.
Bootstrap support for H3DLC6 as seed ortholog is 100%.

Group of orthologs #828. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 T.nigroviridis:180

L0PB62              	100.00%		Q4T330              	100.00%
Bootstrap support for L0PB62 as seed ortholog is 100%.
Bootstrap support for Q4T330 as seed ortholog is 100%.

Group of orthologs #829. Best score 179 bits
Score difference with first non-orthologous sequence - P.jiroveci:179 T.nigroviridis:179

L0PHT7              	100.00%		H3DHK3              	100.00%
                    	       		H3DIP8              	27.06%
                    	       		H3CB23              	21.51%
Bootstrap support for L0PHT7 as seed ortholog is 100%.
Bootstrap support for H3DHK3 as seed ortholog is 100%.

Group of orthologs #830. Best score 179 bits
Score difference with first non-orthologous sequence - P.jiroveci:179 T.nigroviridis:179

L0PGW6              	100.00%		H3CPS4              	100.00%
                    	       		H3DIE0              	25.73%
Bootstrap support for L0PGW6 as seed ortholog is 100%.
Bootstrap support for H3CPS4 as seed ortholog is 100%.

Group of orthologs #831. Best score 179 bits
Score difference with first non-orthologous sequence - P.jiroveci:179 T.nigroviridis:179

L0PEB9              	100.00%		H3DHR2              	100.00%
L0PA79              	57.79%		
Bootstrap support for L0PEB9 as seed ortholog is 100%.
Bootstrap support for H3DHR2 as seed ortholog is 100%.

Group of orthologs #832. Best score 179 bits
Score difference with first non-orthologous sequence - P.jiroveci:179 T.nigroviridis:179

L0PE05              	100.00%		H3CSX6              	100.00%
Bootstrap support for L0PE05 as seed ortholog is 100%.
Bootstrap support for H3CSX6 as seed ortholog is 100%.

Group of orthologs #833. Best score 178 bits
Score difference with first non-orthologous sequence - P.jiroveci:178 T.nigroviridis:53

L0PAA8              	100.00%		H3DB50              	100.00%
Bootstrap support for L0PAA8 as seed ortholog is 100%.
Bootstrap support for H3DB50 as seed ortholog is 97%.

Group of orthologs #834. Best score 178 bits
Score difference with first non-orthologous sequence - P.jiroveci:178 T.nigroviridis:37

L0P805              	100.00%		Q4SF74              	100.00%
Bootstrap support for L0P805 as seed ortholog is 100%.
Bootstrap support for Q4SF74 as seed ortholog is 92%.

Group of orthologs #835. Best score 177 bits
Score difference with first non-orthologous sequence - P.jiroveci:177 T.nigroviridis:103

L0PFZ6              	100.00%		Q4S0H8              	100.00%
L0P7L2              	96.10%		
Bootstrap support for L0PFZ6 as seed ortholog is 100%.
Bootstrap support for Q4S0H8 as seed ortholog is 99%.

Group of orthologs #836. Best score 177 bits
Score difference with first non-orthologous sequence - P.jiroveci:177 T.nigroviridis:177

L0PA34              	100.00%		H3BVK8              	100.00%
Bootstrap support for L0PA34 as seed ortholog is 100%.
Bootstrap support for H3BVK8 as seed ortholog is 100%.

Group of orthologs #837. Best score 177 bits
Score difference with first non-orthologous sequence - P.jiroveci:177 T.nigroviridis:26

L0PFW7              	100.00%		H3CIH4              	100.00%
Bootstrap support for L0PFW7 as seed ortholog is 100%.
Bootstrap support for H3CIH4 as seed ortholog is 95%.

Group of orthologs #838. Best score 177 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 T.nigroviridis:177

L0P9T6              	100.00%		H3CSX5              	100.00%
Bootstrap support for L0P9T6 as seed ortholog is 99%.
Bootstrap support for H3CSX5 as seed ortholog is 100%.

Group of orthologs #839. Best score 177 bits
Score difference with first non-orthologous sequence - P.jiroveci:177 T.nigroviridis:177

L0PC06              	100.00%		H3D924              	100.00%
Bootstrap support for L0PC06 as seed ortholog is 100%.
Bootstrap support for H3D924 as seed ortholog is 100%.

Group of orthologs #840. Best score 176 bits
Score difference with first non-orthologous sequence - P.jiroveci:176 T.nigroviridis:176

L0PE37              	100.00%		H3DH78              	100.00%
Bootstrap support for L0PE37 as seed ortholog is 100%.
Bootstrap support for H3DH78 as seed ortholog is 100%.

Group of orthologs #841. Best score 175 bits
Score difference with first non-orthologous sequence - P.jiroveci:93 T.nigroviridis:24

L0PGM0              	100.00%		H3CJZ6              	100.00%
                    	       		H3C0B0              	66.84%
                    	       		H3CBG3              	38.27%
Bootstrap support for L0PGM0 as seed ortholog is 100%.
Bootstrap support for H3CJZ6 as seed ortholog is 86%.

Group of orthologs #842. Best score 175 bits
Score difference with first non-orthologous sequence - P.jiroveci:175 T.nigroviridis:175

L0PA48              	100.00%		H3CJ93              	100.00%
Bootstrap support for L0PA48 as seed ortholog is 100%.
Bootstrap support for H3CJ93 as seed ortholog is 100%.

Group of orthologs #843. Best score 175 bits
Score difference with first non-orthologous sequence - P.jiroveci:175 T.nigroviridis:57

L0PAV2              	100.00%		H3CXW5              	100.00%
Bootstrap support for L0PAV2 as seed ortholog is 100%.
Bootstrap support for H3CXW5 as seed ortholog is 97%.

Group of orthologs #844. Best score 175 bits
Score difference with first non-orthologous sequence - P.jiroveci:175 T.nigroviridis:175

L0PC80              	100.00%		H3DD58              	100.00%
Bootstrap support for L0PC80 as seed ortholog is 100%.
Bootstrap support for H3DD58 as seed ortholog is 100%.

Group of orthologs #845. Best score 175 bits
Score difference with first non-orthologous sequence - P.jiroveci:175 T.nigroviridis:117

L0PCZ4              	100.00%		H3DFD7              	100.00%
Bootstrap support for L0PCZ4 as seed ortholog is 100%.
Bootstrap support for H3DFD7 as seed ortholog is 99%.

Group of orthologs #846. Best score 174 bits
Score difference with first non-orthologous sequence - P.jiroveci:77 T.nigroviridis:82

L0PDC4              	100.00%		H3BZU9              	100.00%
L0PBK4              	10.48%		
Bootstrap support for L0PDC4 as seed ortholog is 95%.
Bootstrap support for H3BZU9 as seed ortholog is 99%.

Group of orthologs #847. Best score 174 bits
Score difference with first non-orthologous sequence - P.jiroveci:174 T.nigroviridis:174

L0PBJ0              	100.00%		H3C0R0              	100.00%
Bootstrap support for L0PBJ0 as seed ortholog is 100%.
Bootstrap support for H3C0R0 as seed ortholog is 100%.

Group of orthologs #848. Best score 174 bits
Score difference with first non-orthologous sequence - P.jiroveci:174 T.nigroviridis:174

L0PFD7              	100.00%		H3BVN1              	100.00%
Bootstrap support for L0PFD7 as seed ortholog is 100%.
Bootstrap support for H3BVN1 as seed ortholog is 100%.

Group of orthologs #849. Best score 174 bits
Score difference with first non-orthologous sequence - P.jiroveci:174 T.nigroviridis:174

L0P9Q6              	100.00%		H3CIW7              	100.00%
Bootstrap support for L0P9Q6 as seed ortholog is 100%.
Bootstrap support for H3CIW7 as seed ortholog is 100%.

Group of orthologs #850. Best score 174 bits
Score difference with first non-orthologous sequence - P.jiroveci:174 T.nigroviridis:174

L0P8D9              	100.00%		H3D8Y0              	100.00%
Bootstrap support for L0P8D9 as seed ortholog is 100%.
Bootstrap support for H3D8Y0 as seed ortholog is 100%.

Group of orthologs #851. Best score 173 bits
Score difference with first non-orthologous sequence - P.jiroveci:173 T.nigroviridis:86

L0PDJ7              	100.00%		H3DAS7              	100.00%
Bootstrap support for L0PDJ7 as seed ortholog is 100%.
Bootstrap support for H3DAS7 as seed ortholog is 99%.

Group of orthologs #852. Best score 172 bits
Score difference with first non-orthologous sequence - P.jiroveci:172 T.nigroviridis:115

L0P839              	100.00%		H3DLE9              	100.00%
                    	       		H3DLF0              	11.90%
Bootstrap support for L0P839 as seed ortholog is 100%.
Bootstrap support for H3DLE9 as seed ortholog is 99%.

Group of orthologs #853. Best score 172 bits
Score difference with first non-orthologous sequence - P.jiroveci:172 T.nigroviridis:172

L0PB81              	100.00%		H3D8A1              	100.00%
Bootstrap support for L0PB81 as seed ortholog is 100%.
Bootstrap support for H3D8A1 as seed ortholog is 100%.

Group of orthologs #854. Best score 172 bits
Score difference with first non-orthologous sequence - P.jiroveci:172 T.nigroviridis:172

L0PGZ5              	100.00%		H3D535              	100.00%
Bootstrap support for L0PGZ5 as seed ortholog is 100%.
Bootstrap support for H3D535 as seed ortholog is 100%.

Group of orthologs #855. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 T.nigroviridis:171

L0PA27              	100.00%		Q4RXT5              	100.00%
                    	       		H3DBV9              	71.75%
                    	       		Q4TDC5              	27.12%
Bootstrap support for L0PA27 as seed ortholog is 100%.
Bootstrap support for Q4RXT5 as seed ortholog is 100%.

Group of orthologs #856. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 T.nigroviridis:171

L0PFG0              	100.00%		H3DF55              	100.00%
                    	       		H3DLP4              	47.46%
Bootstrap support for L0PFG0 as seed ortholog is 100%.
Bootstrap support for H3DF55 as seed ortholog is 100%.

Group of orthologs #857. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 T.nigroviridis:171

L0PFP1              	100.00%		H3DMJ7              	100.00%
L0PC71              	75.12%		
Bootstrap support for L0PFP1 as seed ortholog is 100%.
Bootstrap support for H3DMJ7 as seed ortholog is 100%.

Group of orthologs #858. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 T.nigroviridis:122

L0PBU7              	100.00%		H3CQF4              	100.00%
Bootstrap support for L0PBU7 as seed ortholog is 100%.
Bootstrap support for H3CQF4 as seed ortholog is 100%.

Group of orthologs #859. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 T.nigroviridis:171

L0PDP9              	100.00%		Q4SD17              	100.00%
Bootstrap support for L0PDP9 as seed ortholog is 100%.
Bootstrap support for Q4SD17 as seed ortholog is 100%.

Group of orthologs #860. Best score 170 bits
Score difference with first non-orthologous sequence - P.jiroveci:170 T.nigroviridis:111

L0PC66              	100.00%		Q4RIR8              	100.00%
L0PBN8              	73.58%		
Bootstrap support for L0PC66 as seed ortholog is 100%.
Bootstrap support for Q4RIR8 as seed ortholog is 100%.

Group of orthologs #861. Best score 170 bits
Score difference with first non-orthologous sequence - P.jiroveci:170 T.nigroviridis:170

L0P9N4              	100.00%		H3BYH5              	100.00%
Bootstrap support for L0P9N4 as seed ortholog is 100%.
Bootstrap support for H3BYH5 as seed ortholog is 100%.

Group of orthologs #862. Best score 170 bits
Score difference with first non-orthologous sequence - P.jiroveci:170 T.nigroviridis:57

L0PD63              	100.00%		H3CLY0              	100.00%
Bootstrap support for L0PD63 as seed ortholog is 100%.
Bootstrap support for H3CLY0 as seed ortholog is 98%.

Group of orthologs #863. Best score 170 bits
Score difference with first non-orthologous sequence - P.jiroveci:170 T.nigroviridis:170

L0PG54              	100.00%		Q4T2X8              	100.00%
Bootstrap support for L0PG54 as seed ortholog is 100%.
Bootstrap support for Q4T2X8 as seed ortholog is 100%.

Group of orthologs #864. Best score 169 bits
Score difference with first non-orthologous sequence - P.jiroveci:169 T.nigroviridis:169

L0PE02              	100.00%		H3CC71              	100.00%
Bootstrap support for L0PE02 as seed ortholog is 100%.
Bootstrap support for H3CC71 as seed ortholog is 100%.

Group of orthologs #865. Best score 169 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 T.nigroviridis:169

L0PDR1              	100.00%		H3CJ89              	100.00%
Bootstrap support for L0PDR1 as seed ortholog is 98%.
Bootstrap support for H3CJ89 as seed ortholog is 100%.

Group of orthologs #866. Best score 169 bits
Score difference with first non-orthologous sequence - P.jiroveci:73 T.nigroviridis:105

L0PAQ4              	100.00%		H3CZJ2              	100.00%
Bootstrap support for L0PAQ4 as seed ortholog is 97%.
Bootstrap support for H3CZJ2 as seed ortholog is 99%.

Group of orthologs #867. Best score 168 bits
Score difference with first non-orthologous sequence - P.jiroveci:168 T.nigroviridis:168

L0PD52              	100.00%		H3CYQ8              	100.00%
L0PDL8              	100.00%		
Bootstrap support for L0PD52 as seed ortholog is 100%.
Bootstrap support for L0PDL8 as seed ortholog is 100%.
Bootstrap support for H3CYQ8 as seed ortholog is 100%.

Group of orthologs #868. Best score 168 bits
Score difference with first non-orthologous sequence - P.jiroveci:168 T.nigroviridis:53

L0PF05              	100.00%		H3C0A3              	100.00%
Bootstrap support for L0PF05 as seed ortholog is 100%.
Bootstrap support for H3C0A3 as seed ortholog is 98%.

Group of orthologs #869. Best score 168 bits
Score difference with first non-orthologous sequence - P.jiroveci:168 T.nigroviridis:9

L0PH23              	100.00%		H3CD98              	100.00%
Bootstrap support for L0PH23 as seed ortholog is 100%.
Bootstrap support for H3CD98 as seed ortholog is 54%.
Alternative seed ortholog is H3D0I5 (9 bits away from this cluster)

Group of orthologs #870. Best score 168 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 T.nigroviridis:92

L0P7L3              	100.00%		H3CSQ4              	100.00%
Bootstrap support for L0P7L3 as seed ortholog is 99%.
Bootstrap support for H3CSQ4 as seed ortholog is 99%.

Group of orthologs #871. Best score 168 bits
Score difference with first non-orthologous sequence - P.jiroveci:168 T.nigroviridis:168

L0PD40              	100.00%		H3DBT5              	100.00%
Bootstrap support for L0PD40 as seed ortholog is 100%.
Bootstrap support for H3DBT5 as seed ortholog is 100%.

Group of orthologs #872. Best score 168 bits
Score difference with first non-orthologous sequence - P.jiroveci:168 T.nigroviridis:90

L0P838              	100.00%		H3DKX1              	100.00%
Bootstrap support for L0P838 as seed ortholog is 100%.
Bootstrap support for H3DKX1 as seed ortholog is 99%.

Group of orthologs #873. Best score 167 bits
Score difference with first non-orthologous sequence - P.jiroveci:167 T.nigroviridis:167

L0P965              	100.00%		H3CW12              	100.00%
                    	       		H3CAG3              	80.00%
Bootstrap support for L0P965 as seed ortholog is 100%.
Bootstrap support for H3CW12 as seed ortholog is 100%.

Group of orthologs #874. Best score 167 bits
Score difference with first non-orthologous sequence - P.jiroveci:167 T.nigroviridis:50

L0PDG6              	100.00%		H3D314              	100.00%
Bootstrap support for L0PDG6 as seed ortholog is 100%.
Bootstrap support for H3D314 as seed ortholog is 90%.

Group of orthologs #875. Best score 167 bits
Score difference with first non-orthologous sequence - P.jiroveci:167 T.nigroviridis:7

L0PFZ5              	100.00%		Q4SMQ7              	100.00%
Bootstrap support for L0PFZ5 as seed ortholog is 100%.
Bootstrap support for Q4SMQ7 as seed ortholog is 56%.
Alternative seed ortholog is H3DCG2 (7 bits away from this cluster)

Group of orthologs #876. Best score 166 bits
Score difference with first non-orthologous sequence - P.jiroveci:166 T.nigroviridis:166

L0PA28              	100.00%		H3CFU7              	100.00%
Bootstrap support for L0PA28 as seed ortholog is 100%.
Bootstrap support for H3CFU7 as seed ortholog is 100%.

Group of orthologs #877. Best score 166 bits
Score difference with first non-orthologous sequence - P.jiroveci:166 T.nigroviridis:110

L0PC70              	100.00%		H3CKN0              	100.00%
Bootstrap support for L0PC70 as seed ortholog is 100%.
Bootstrap support for H3CKN0 as seed ortholog is 100%.

Group of orthologs #878. Best score 166 bits
Score difference with first non-orthologous sequence - P.jiroveci:166 T.nigroviridis:166

L0PEA1              	100.00%		H3CIN1              	100.00%
Bootstrap support for L0PEA1 as seed ortholog is 100%.
Bootstrap support for H3CIN1 as seed ortholog is 100%.

Group of orthologs #879. Best score 166 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 T.nigroviridis:166

L0PG93              	100.00%		H3D9P1              	100.00%
Bootstrap support for L0PG93 as seed ortholog is 99%.
Bootstrap support for H3D9P1 as seed ortholog is 100%.

Group of orthologs #880. Best score 166 bits
Score difference with first non-orthologous sequence - P.jiroveci:166 T.nigroviridis:166

L0PCP5              	100.00%		H3DFH9              	100.00%
Bootstrap support for L0PCP5 as seed ortholog is 100%.
Bootstrap support for H3DFH9 as seed ortholog is 100%.

Group of orthologs #881. Best score 165 bits
Score difference with first non-orthologous sequence - P.jiroveci:113 T.nigroviridis:54

L0PE79              	100.00%		H3D4L1              	100.00%
                    	       		Q4S7E9              	100.00%
                    	       		H3CNK8              	90.20%
                    	       		H3CLX4              	80.39%
                    	       		Q4SAD9              	77.78%
                    	       		H3DHD3              	31.37%
                    	       		H3C3Q7              	29.90%
                    	       		H3D8Z4              	29.90%
                    	       		H3CS77              	29.41%
                    	       		Q4SQ77              	10.65%
                    	       		H3D814              	10.19%
                    	       		H3CY15              	8.80%
                    	       		H3D9S3              	6.02%
Bootstrap support for L0PE79 as seed ortholog is 99%.
Bootstrap support for H3D4L1 as seed ortholog is 98%.
Bootstrap support for Q4S7E9 as seed ortholog is 98%.

Group of orthologs #882. Best score 165 bits
Score difference with first non-orthologous sequence - P.jiroveci:165 T.nigroviridis:32

L0PC81              	100.00%		H3DB03              	100.00%
                    	       		H3CMZ1              	5.16%
Bootstrap support for L0PC81 as seed ortholog is 100%.
Bootstrap support for H3DB03 as seed ortholog is 80%.

Group of orthologs #883. Best score 165 bits
Score difference with first non-orthologous sequence - P.jiroveci:165 T.nigroviridis:165

L0P8D5              	100.00%		H3CBX1              	100.00%
Bootstrap support for L0P8D5 as seed ortholog is 100%.
Bootstrap support for H3CBX1 as seed ortholog is 100%.

Group of orthologs #884. Best score 165 bits
Score difference with first non-orthologous sequence - P.jiroveci:165 T.nigroviridis:165

L0PGP5              	100.00%		H3DKY0              	100.00%
Bootstrap support for L0PGP5 as seed ortholog is 100%.
Bootstrap support for H3DKY0 as seed ortholog is 100%.

Group of orthologs #885. Best score 164 bits
Score difference with first non-orthologous sequence - P.jiroveci:164 T.nigroviridis:52

L0PFH2              	100.00%		H3C3G5              	100.00%
                    	       		H3CV82              	33.29%
Bootstrap support for L0PFH2 as seed ortholog is 100%.
Bootstrap support for H3C3G5 as seed ortholog is 97%.

Group of orthologs #886. Best score 164 bits
Score difference with first non-orthologous sequence - P.jiroveci:164 T.nigroviridis:164

L0PFX5              	100.00%		H3BXV3              	100.00%
Bootstrap support for L0PFX5 as seed ortholog is 100%.
Bootstrap support for H3BXV3 as seed ortholog is 100%.

Group of orthologs #887. Best score 164 bits
Score difference with first non-orthologous sequence - P.jiroveci:164 T.nigroviridis:164

L0PF39              	100.00%		H3D4L4              	100.00%
Bootstrap support for L0PF39 as seed ortholog is 100%.
Bootstrap support for H3D4L4 as seed ortholog is 100%.

Group of orthologs #888. Best score 164 bits
Score difference with first non-orthologous sequence - P.jiroveci:164 T.nigroviridis:164

L0PEX0              	100.00%		H3D5X9              	100.00%
Bootstrap support for L0PEX0 as seed ortholog is 100%.
Bootstrap support for H3D5X9 as seed ortholog is 100%.

Group of orthologs #889. Best score 164 bits
Score difference with first non-orthologous sequence - P.jiroveci:164 T.nigroviridis:164

L0PEK7              	100.00%		Q4SBG3              	100.00%
Bootstrap support for L0PEK7 as seed ortholog is 100%.
Bootstrap support for Q4SBG3 as seed ortholog is 100%.

Group of orthologs #890. Best score 163 bits
Score difference with first non-orthologous sequence - P.jiroveci:163 T.nigroviridis:163

L0PAG4              	100.00%		H3CMD5              	100.00%
                    	       		H3CQW6              	70.72%
Bootstrap support for L0PAG4 as seed ortholog is 100%.
Bootstrap support for H3CMD5 as seed ortholog is 100%.

Group of orthologs #891. Best score 163 bits
Score difference with first non-orthologous sequence - P.jiroveci:163 T.nigroviridis:163

L0P9G6              	100.00%		H3CDN0              	100.00%
Bootstrap support for L0P9G6 as seed ortholog is 100%.
Bootstrap support for H3CDN0 as seed ortholog is 100%.

Group of orthologs #892. Best score 163 bits
Score difference with first non-orthologous sequence - P.jiroveci:163 T.nigroviridis:163

L0PA78              	100.00%		H3CNW9              	100.00%
Bootstrap support for L0PA78 as seed ortholog is 100%.
Bootstrap support for H3CNW9 as seed ortholog is 100%.

Group of orthologs #893. Best score 163 bits
Score difference with first non-orthologous sequence - P.jiroveci:163 T.nigroviridis:163

L0PGF9              	100.00%		H3CGR6              	100.00%
Bootstrap support for L0PGF9 as seed ortholog is 100%.
Bootstrap support for H3CGR6 as seed ortholog is 100%.

Group of orthologs #894. Best score 162 bits
Score difference with first non-orthologous sequence - P.jiroveci:162 T.nigroviridis:118

L0P701              	100.00%		H3D2M2              	100.00%
                    	       		H3CQT6              	41.69%
Bootstrap support for L0P701 as seed ortholog is 100%.
Bootstrap support for H3D2M2 as seed ortholog is 99%.

Group of orthologs #895. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 T.nigroviridis:161

L0PCC8              	100.00%		H3C9Z4              	100.00%
                    	       		H3DJ07              	27.54%
Bootstrap support for L0PCC8 as seed ortholog is 100%.
Bootstrap support for H3C9Z4 as seed ortholog is 100%.

Group of orthologs #896. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 T.nigroviridis:161

L0PCM5              	100.00%		H3C4T6              	100.00%
Bootstrap support for L0PCM5 as seed ortholog is 100%.
Bootstrap support for H3C4T6 as seed ortholog is 100%.

Group of orthologs #897. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 T.nigroviridis:161

L0PC68              	100.00%		H3CA31              	100.00%
Bootstrap support for L0PC68 as seed ortholog is 100%.
Bootstrap support for H3CA31 as seed ortholog is 100%.

Group of orthologs #898. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 T.nigroviridis:69

L0PBF9              	100.00%		H3DPN6              	100.00%
Bootstrap support for L0PBF9 as seed ortholog is 99%.
Bootstrap support for H3DPN6 as seed ortholog is 98%.

Group of orthologs #899. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 T.nigroviridis:161

L0PHA7              	100.00%		H3DPK4              	100.00%
Bootstrap support for L0PHA7 as seed ortholog is 100%.
Bootstrap support for H3DPK4 as seed ortholog is 100%.

Group of orthologs #900. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 T.nigroviridis:161

L0PEZ4              	100.00%		Q4SUY7              	100.00%
Bootstrap support for L0PEZ4 as seed ortholog is 100%.
Bootstrap support for Q4SUY7 as seed ortholog is 100%.

Group of orthologs #901. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 T.nigroviridis:160

L0PBR7              	100.00%		H3CSV0              	100.00%
                    	       		Q4SL95              	100.00%
                    	       		Q4SKJ9              	68.60%
                    	       		Q4SKJ4              	67.44%
                    	       		H3CDR5              	63.95%
                    	       		Q4SU62              	63.95%
                    	       		H3C993              	34.88%
                    	       		H3CMB1              	11.43%
Bootstrap support for L0PBR7 as seed ortholog is 100%.
Bootstrap support for H3CSV0 as seed ortholog is 100%.
Bootstrap support for Q4SL95 as seed ortholog is 100%.

Group of orthologs #902. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 T.nigroviridis:160

L0P9G8              	100.00%		H3CT44              	100.00%
L0PDI0              	51.09%		
Bootstrap support for L0P9G8 as seed ortholog is 100%.
Bootstrap support for H3CT44 as seed ortholog is 100%.

Group of orthologs #903. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 T.nigroviridis:160

L0PEG0              	100.00%		H3BY52              	100.00%
Bootstrap support for L0PEG0 as seed ortholog is 100%.
Bootstrap support for H3BY52 as seed ortholog is 100%.

Group of orthologs #904. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 T.nigroviridis:64

L0PDE4              	100.00%		H3CHH0              	100.00%
Bootstrap support for L0PDE4 as seed ortholog is 100%.
Bootstrap support for H3CHH0 as seed ortholog is 99%.

Group of orthologs #905. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:41 T.nigroviridis:160

L0PCJ0              	100.00%		H3CM80              	100.00%
Bootstrap support for L0PCJ0 as seed ortholog is 73%.
Alternative seed ortholog is L0PGZ6 (41 bits away from this cluster)
Bootstrap support for H3CM80 as seed ortholog is 100%.

Group of orthologs #906. Best score 159 bits
Score difference with first non-orthologous sequence - P.jiroveci:159 T.nigroviridis:33

L0PBS7              	100.00%		H3CLD9              	100.00%
                    	       		H3DMN8              	8.61%
Bootstrap support for L0PBS7 as seed ortholog is 100%.
Bootstrap support for H3CLD9 as seed ortholog is 80%.

Group of orthologs #907. Best score 159 bits
Score difference with first non-orthologous sequence - P.jiroveci:159 T.nigroviridis:159

L0PBL9              	100.00%		H3CLC8              	100.00%
Bootstrap support for L0PBL9 as seed ortholog is 100%.
Bootstrap support for H3CLC8 as seed ortholog is 100%.

Group of orthologs #908. Best score 159 bits
Score difference with first non-orthologous sequence - P.jiroveci:159 T.nigroviridis:159

L0PFE1              	100.00%		H3CIS9              	100.00%
Bootstrap support for L0PFE1 as seed ortholog is 100%.
Bootstrap support for H3CIS9 as seed ortholog is 100%.

Group of orthologs #909. Best score 159 bits
Score difference with first non-orthologous sequence - P.jiroveci:159 T.nigroviridis:159

L0P740              	100.00%		H3DBF8              	100.00%
Bootstrap support for L0P740 as seed ortholog is 100%.
Bootstrap support for H3DBF8 as seed ortholog is 100%.

Group of orthologs #910. Best score 159 bits
Score difference with first non-orthologous sequence - P.jiroveci:159 T.nigroviridis:159

L0PG78              	100.00%		H3D6C9              	100.00%
Bootstrap support for L0PG78 as seed ortholog is 100%.
Bootstrap support for H3D6C9 as seed ortholog is 100%.

Group of orthologs #911. Best score 159 bits
Score difference with first non-orthologous sequence - P.jiroveci:159 T.nigroviridis:159

L0PAS4              	100.00%		H3DJI3              	100.00%
Bootstrap support for L0PAS4 as seed ortholog is 100%.
Bootstrap support for H3DJI3 as seed ortholog is 100%.

Group of orthologs #912. Best score 158 bits
Score difference with first non-orthologous sequence - P.jiroveci:158 T.nigroviridis:102

L0PH33              	100.00%		H3BZ61              	100.00%
                    	       		H3D9D2              	53.54%
                    	       		H3C5U3              	23.05%
                    	       		H3CTL1              	22.40%
                    	       		H3CPZ6              	20.59%
                    	       		H3C075              	20.16%
                    	       		H3DLM4              	17.77%
Bootstrap support for L0PH33 as seed ortholog is 100%.
Bootstrap support for H3BZ61 as seed ortholog is 98%.

Group of orthologs #913. Best score 158 bits
Score difference with first non-orthologous sequence - P.jiroveci:158 T.nigroviridis:29

L0PGR5              	100.00%		H3CKY2              	100.00%
Bootstrap support for L0PGR5 as seed ortholog is 100%.
Bootstrap support for H3CKY2 as seed ortholog is 75%.

Group of orthologs #914. Best score 158 bits
Score difference with first non-orthologous sequence - P.jiroveci:158 T.nigroviridis:158

L0PCA8              	100.00%		H3D928              	100.00%
Bootstrap support for L0PCA8 as seed ortholog is 100%.
Bootstrap support for H3D928 as seed ortholog is 100%.

Group of orthologs #915. Best score 158 bits
Score difference with first non-orthologous sequence - P.jiroveci:158 T.nigroviridis:158

L0PDA4              	100.00%		H3DBB3              	100.00%
Bootstrap support for L0PDA4 as seed ortholog is 100%.
Bootstrap support for H3DBB3 as seed ortholog is 100%.

Group of orthologs #916. Best score 158 bits
Score difference with first non-orthologous sequence - P.jiroveci:158 T.nigroviridis:158

L0P8P5              	100.00%		Q4T8A1              	100.00%
Bootstrap support for L0P8P5 as seed ortholog is 100%.
Bootstrap support for Q4T8A1 as seed ortholog is 100%.

Group of orthologs #917. Best score 157 bits
Score difference with first non-orthologous sequence - P.jiroveci:157 T.nigroviridis:49

L0PEN4              	100.00%		H3DH55              	100.00%
                    	       		H3D232              	24.51%
                    	       		H3CYR6              	8.17%
Bootstrap support for L0PEN4 as seed ortholog is 100%.
Bootstrap support for H3DH55 as seed ortholog is 81%.

Group of orthologs #918. Best score 157 bits
Score difference with first non-orthologous sequence - P.jiroveci:157 T.nigroviridis:157

L0PDZ3              	100.00%		H3CY64              	100.00%
                    	       		H3DHE0              	31.66%
Bootstrap support for L0PDZ3 as seed ortholog is 100%.
Bootstrap support for H3CY64 as seed ortholog is 100%.

Group of orthologs #919. Best score 157 bits
Score difference with first non-orthologous sequence - P.jiroveci:157 T.nigroviridis:157

L0PEN8              	100.00%		H3C730              	100.00%
Bootstrap support for L0PEN8 as seed ortholog is 100%.
Bootstrap support for H3C730 as seed ortholog is 100%.

Group of orthologs #920. Best score 157 bits
Score difference with first non-orthologous sequence - P.jiroveci:157 T.nigroviridis:157

L0P9X0              	100.00%		H3CFQ0              	100.00%
Bootstrap support for L0P9X0 as seed ortholog is 100%.
Bootstrap support for H3CFQ0 as seed ortholog is 100%.

Group of orthologs #921. Best score 157 bits
Score difference with first non-orthologous sequence - P.jiroveci:157 T.nigroviridis:157

L0PAB2              	100.00%		H3CSA5              	100.00%
Bootstrap support for L0PAB2 as seed ortholog is 100%.
Bootstrap support for H3CSA5 as seed ortholog is 100%.

Group of orthologs #922. Best score 157 bits
Score difference with first non-orthologous sequence - P.jiroveci:157 T.nigroviridis:157

L0PFY9              	100.00%		H3D1B9              	100.00%
Bootstrap support for L0PFY9 as seed ortholog is 100%.
Bootstrap support for H3D1B9 as seed ortholog is 100%.

Group of orthologs #923. Best score 157 bits
Score difference with first non-orthologous sequence - P.jiroveci:157 T.nigroviridis:157

L0PDY2              	100.00%		H3DFB4              	100.00%
Bootstrap support for L0PDY2 as seed ortholog is 100%.
Bootstrap support for H3DFB4 as seed ortholog is 100%.

Group of orthologs #924. Best score 156 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 T.nigroviridis:78

L0PFK9              	100.00%		H3D3L1              	100.00%
                    	       		H3D6D6              	8.67%
Bootstrap support for L0PFK9 as seed ortholog is 99%.
Bootstrap support for H3D3L1 as seed ortholog is 98%.

Group of orthologs #925. Best score 156 bits
Score difference with first non-orthologous sequence - P.jiroveci:156 T.nigroviridis:75

L0PBU8              	100.00%		H3CGK4              	100.00%
Bootstrap support for L0PBU8 as seed ortholog is 100%.
Bootstrap support for H3CGK4 as seed ortholog is 100%.

Group of orthologs #926. Best score 156 bits
Score difference with first non-orthologous sequence - P.jiroveci:156 T.nigroviridis:156

L0PF66              	100.00%		H3D392              	100.00%
Bootstrap support for L0PF66 as seed ortholog is 100%.
Bootstrap support for H3D392 as seed ortholog is 100%.

Group of orthologs #927. Best score 155 bits
Score difference with first non-orthologous sequence - P.jiroveci:155 T.nigroviridis:155

L0PI55              	100.00%		H3CVV4              	100.00%
L0P840              	83.55%		
Bootstrap support for L0PI55 as seed ortholog is 100%.
Bootstrap support for H3CVV4 as seed ortholog is 100%.

Group of orthologs #928. Best score 155 bits
Score difference with first non-orthologous sequence - P.jiroveci:155 T.nigroviridis:155

L0P7D0              	100.00%		H3DP55              	100.00%
                    	       		H3D4M7              	9.77%
Bootstrap support for L0P7D0 as seed ortholog is 100%.
Bootstrap support for H3DP55 as seed ortholog is 100%.

Group of orthologs #929. Best score 155 bits
Score difference with first non-orthologous sequence - P.jiroveci:155 T.nigroviridis:155

L0PFQ7              	100.00%		H3CHN3              	100.00%
Bootstrap support for L0PFQ7 as seed ortholog is 100%.
Bootstrap support for H3CHN3 as seed ortholog is 100%.

Group of orthologs #930. Best score 155 bits
Score difference with first non-orthologous sequence - P.jiroveci:155 T.nigroviridis:155

L0P8J7              	100.00%		Q4TBF8              	100.00%
Bootstrap support for L0P8J7 as seed ortholog is 100%.
Bootstrap support for Q4TBF8 as seed ortholog is 100%.

Group of orthologs #931. Best score 154 bits
Score difference with first non-orthologous sequence - P.jiroveci:154 T.nigroviridis:60

L0PD97              	100.00%		Q4T1F0              	100.00%
                    	       		H3D2I3              	7.44%
                    	       		H3CYF6              	6.78%
Bootstrap support for L0PD97 as seed ortholog is 100%.
Bootstrap support for Q4T1F0 as seed ortholog is 97%.

Group of orthologs #932. Best score 154 bits
Score difference with first non-orthologous sequence - P.jiroveci:154 T.nigroviridis:154

L0PDI9              	100.00%		H3DCQ0              	100.00%
                    	       		H3C3T2              	20.22%
Bootstrap support for L0PDI9 as seed ortholog is 100%.
Bootstrap support for H3DCQ0 as seed ortholog is 100%.

Group of orthologs #933. Best score 154 bits
Score difference with first non-orthologous sequence - P.jiroveci:154 T.nigroviridis:154

L0P9L8              	100.00%		H3CGH5              	100.00%
Bootstrap support for L0P9L8 as seed ortholog is 100%.
Bootstrap support for H3CGH5 as seed ortholog is 100%.

Group of orthologs #934. Best score 153 bits
Score difference with first non-orthologous sequence - P.jiroveci:153 T.nigroviridis:50

L0PF33              	100.00%		H3DH13              	100.00%
                    	       		H3D2Z1              	77.97%
Bootstrap support for L0PF33 as seed ortholog is 100%.
Bootstrap support for H3DH13 as seed ortholog is 98%.

Group of orthologs #935. Best score 153 bits
Score difference with first non-orthologous sequence - P.jiroveci:153 T.nigroviridis:153

L0PBI9              	100.00%		H3C3E9              	100.00%
Bootstrap support for L0PBI9 as seed ortholog is 100%.
Bootstrap support for H3C3E9 as seed ortholog is 100%.

Group of orthologs #936. Best score 153 bits
Score difference with first non-orthologous sequence - P.jiroveci:153 T.nigroviridis:83

L0PEA9              	100.00%		H3DAG3              	100.00%
Bootstrap support for L0PEA9 as seed ortholog is 100%.
Bootstrap support for H3DAG3 as seed ortholog is 99%.

Group of orthologs #937. Best score 153 bits
Score difference with first non-orthologous sequence - P.jiroveci:153 T.nigroviridis:153

L0PCP0              	100.00%		H3DI00              	100.00%
Bootstrap support for L0PCP0 as seed ortholog is 100%.
Bootstrap support for H3DI00 as seed ortholog is 100%.

Group of orthologs #938. Best score 152 bits
Score difference with first non-orthologous sequence - P.jiroveci:152 T.nigroviridis:152

L0P9U0              	100.00%		H3CLU5              	100.00%
Bootstrap support for L0P9U0 as seed ortholog is 100%.
Bootstrap support for H3CLU5 as seed ortholog is 100%.

Group of orthologs #939. Best score 152 bits
Score difference with first non-orthologous sequence - P.jiroveci:152 T.nigroviridis:152

L0P9D1              	100.00%		H3D9R6              	100.00%
Bootstrap support for L0P9D1 as seed ortholog is 100%.
Bootstrap support for H3D9R6 as seed ortholog is 100%.

Group of orthologs #940. Best score 152 bits
Score difference with first non-orthologous sequence - P.jiroveci:152 T.nigroviridis:152

L0P9Y2              	100.00%		Q4RMB7              	100.00%
Bootstrap support for L0P9Y2 as seed ortholog is 100%.
Bootstrap support for Q4RMB7 as seed ortholog is 100%.

Group of orthologs #941. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 T.nigroviridis:151

L0PDH1              	100.00%		H3BXT4              	100.00%
Bootstrap support for L0PDH1 as seed ortholog is 100%.
Bootstrap support for H3BXT4 as seed ortholog is 100%.

Group of orthologs #942. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 T.nigroviridis:151

L0PF65              	100.00%		H3BW67              	100.00%
Bootstrap support for L0PF65 as seed ortholog is 100%.
Bootstrap support for H3BW67 as seed ortholog is 100%.

Group of orthologs #943. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 T.nigroviridis:151

L0PD11              	100.00%		H3CD38              	100.00%
Bootstrap support for L0PD11 as seed ortholog is 100%.
Bootstrap support for H3CD38 as seed ortholog is 100%.

Group of orthologs #944. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 T.nigroviridis:151

L0PEN3              	100.00%		H3CHH1              	100.00%
Bootstrap support for L0PEN3 as seed ortholog is 100%.
Bootstrap support for H3CHH1 as seed ortholog is 100%.

Group of orthologs #945. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 T.nigroviridis:151

L0PE43              	100.00%		H3D2K7              	100.00%
Bootstrap support for L0PE43 as seed ortholog is 100%.
Bootstrap support for H3D2K7 as seed ortholog is 100%.

Group of orthologs #946. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 T.nigroviridis:151

L0P7U2              	100.00%		H3DLL5              	100.00%
Bootstrap support for L0P7U2 as seed ortholog is 100%.
Bootstrap support for H3DLL5 as seed ortholog is 100%.

Group of orthologs #947. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 T.nigroviridis:151

L0P7E9              	100.00%		Q4SP62              	100.00%
Bootstrap support for L0P7E9 as seed ortholog is 100%.
Bootstrap support for Q4SP62 as seed ortholog is 100%.

Group of orthologs #948. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 T.nigroviridis:151

L0PDV9              	100.00%		H3DP43              	100.00%
Bootstrap support for L0PDV9 as seed ortholog is 100%.
Bootstrap support for H3DP43 as seed ortholog is 100%.

Group of orthologs #949. Best score 150 bits
Score difference with first non-orthologous sequence - P.jiroveci:150 T.nigroviridis:150

L0PB34              	100.00%		Q4SU51              	100.00%
                    	       		Q4S2D3              	67.95%
Bootstrap support for L0PB34 as seed ortholog is 100%.
Bootstrap support for Q4SU51 as seed ortholog is 100%.

Group of orthologs #950. Best score 150 bits
Score difference with first non-orthologous sequence - P.jiroveci:36 T.nigroviridis:150

L0PGP9              	100.00%		H3D9I9              	100.00%
Bootstrap support for L0PGP9 as seed ortholog is 86%.
Bootstrap support for H3D9I9 as seed ortholog is 100%.

Group of orthologs #951. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 T.nigroviridis:84

L0PDE1              	100.00%		H3CBK7              	100.00%
                    	       		H3CQ72              	10.06%
                    	       		H3D487              	7.92%
                    	       		Q4S8T6              	5.78%
Bootstrap support for L0PDE1 as seed ortholog is 99%.
Bootstrap support for H3CBK7 as seed ortholog is 99%.

Group of orthologs #952. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 T.nigroviridis:149

L0PFW9              	100.00%		H3CAM3              	100.00%
                    	       		H3CQL5              	42.61%
Bootstrap support for L0PFW9 as seed ortholog is 100%.
Bootstrap support for H3CAM3 as seed ortholog is 100%.

Group of orthologs #953. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 T.nigroviridis:20

L0PG65              	100.00%		H3D711              	100.00%
                    	       		H3D4K7              	40.86%
Bootstrap support for L0PG65 as seed ortholog is 100%.
Bootstrap support for H3D711 as seed ortholog is 70%.
Alternative seed ortholog is H3CE14 (20 bits away from this cluster)

Group of orthologs #954. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 T.nigroviridis:149

L0PCU6              	100.00%		H3CG04              	100.00%
Bootstrap support for L0PCU6 as seed ortholog is 100%.
Bootstrap support for H3CG04 as seed ortholog is 100%.

Group of orthologs #955. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 T.nigroviridis:149

L0PFY6              	100.00%		H3CGV0              	100.00%
Bootstrap support for L0PFY6 as seed ortholog is 100%.
Bootstrap support for H3CGV0 as seed ortholog is 100%.

Group of orthologs #956. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 T.nigroviridis:149

L0P872              	100.00%		H3CZF9              	100.00%
Bootstrap support for L0P872 as seed ortholog is 100%.
Bootstrap support for H3CZF9 as seed ortholog is 100%.

Group of orthologs #957. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 T.nigroviridis:149

L0PFG9              	100.00%		H3D035              	100.00%
Bootstrap support for L0PFG9 as seed ortholog is 100%.
Bootstrap support for H3D035 as seed ortholog is 100%.

Group of orthologs #958. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 T.nigroviridis:148

L0PB30              	100.00%		H3D4E5              	100.00%
                    	       		H3C7Q6              	47.50%
                    	       		H3CXR6              	38.99%
                    	       		H3D0T3              	21.96%
                    	       		H3DID0              	5.07%
Bootstrap support for L0PB30 as seed ortholog is 100%.
Bootstrap support for H3D4E5 as seed ortholog is 100%.

Group of orthologs #959. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 T.nigroviridis:148

L0PD70              	100.00%		H3CHN7              	100.00%
L0P9Q7              	82.22%		
Bootstrap support for L0PD70 as seed ortholog is 100%.
Bootstrap support for H3CHN7 as seed ortholog is 100%.

Group of orthologs #960. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 T.nigroviridis:148

L0PCG3              	100.00%		Q4SAA3              	100.00%
                    	       		H3CTR1              	70.73%
Bootstrap support for L0PCG3 as seed ortholog is 100%.
Bootstrap support for Q4SAA3 as seed ortholog is 100%.

Group of orthologs #961. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 T.nigroviridis:148

L0P8Y0              	100.00%		H3CCX0              	100.00%
Bootstrap support for L0P8Y0 as seed ortholog is 100%.
Bootstrap support for H3CCX0 as seed ortholog is 100%.

Group of orthologs #962. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 T.nigroviridis:91

L0PCC0              	100.00%		H3C7M6              	100.00%
Bootstrap support for L0PCC0 as seed ortholog is 100%.
Bootstrap support for H3C7M6 as seed ortholog is 99%.

Group of orthologs #963. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 T.nigroviridis:148

L0PCK9              	100.00%		H3CAT0              	100.00%
Bootstrap support for L0PCK9 as seed ortholog is 100%.
Bootstrap support for H3CAT0 as seed ortholog is 100%.

Group of orthologs #964. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 T.nigroviridis:148

L0P7V4              	100.00%		H3D4Z8              	100.00%
Bootstrap support for L0P7V4 as seed ortholog is 100%.
Bootstrap support for H3D4Z8 as seed ortholog is 100%.

Group of orthologs #965. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 T.nigroviridis:148

L0PFD5              	100.00%		H3DMG6              	100.00%
Bootstrap support for L0PFD5 as seed ortholog is 100%.
Bootstrap support for H3DMG6 as seed ortholog is 100%.

Group of orthologs #966. Best score 147 bits
Score difference with first non-orthologous sequence - P.jiroveci:46 T.nigroviridis:29

L0P9Y3              	100.00%		H3D4W7              	100.00%
                    	       		H3CTZ1              	58.47%
                    	       		H3DKK0              	52.12%
                    	       		H3CD12              	22.25%
Bootstrap support for L0P9Y3 as seed ortholog is 81%.
Bootstrap support for H3D4W7 as seed ortholog is 83%.

Group of orthologs #967. Best score 147 bits
Score difference with first non-orthologous sequence - P.jiroveci:147 T.nigroviridis:147

L0PA22              	100.00%		H3CRV5              	100.00%
                    	       		H3CLH0              	74.20%
Bootstrap support for L0PA22 as seed ortholog is 100%.
Bootstrap support for H3CRV5 as seed ortholog is 100%.

Group of orthologs #968. Best score 147 bits
Score difference with first non-orthologous sequence - P.jiroveci:147 T.nigroviridis:147

L0P7C8              	100.00%		H3DDG8              	100.00%
                    	       		H3DBQ0              	22.61%
Bootstrap support for L0P7C8 as seed ortholog is 100%.
Bootstrap support for H3DDG8 as seed ortholog is 100%.

Group of orthologs #969. Best score 147 bits
Score difference with first non-orthologous sequence - P.jiroveci:147 T.nigroviridis:147

L0P8G7              	100.00%		H3D3V0              	100.00%
Bootstrap support for L0P8G7 as seed ortholog is 100%.
Bootstrap support for H3D3V0 as seed ortholog is 100%.

Group of orthologs #970. Best score 147 bits
Score difference with first non-orthologous sequence - P.jiroveci:147 T.nigroviridis:147

L0P9W6              	100.00%		H3D2E9              	100.00%
Bootstrap support for L0P9W6 as seed ortholog is 100%.
Bootstrap support for H3D2E9 as seed ortholog is 100%.

Group of orthologs #971. Best score 147 bits
Score difference with first non-orthologous sequence - P.jiroveci:147 T.nigroviridis:147

L0PAW7              	100.00%		H3DMH6              	100.00%
Bootstrap support for L0PAW7 as seed ortholog is 100%.
Bootstrap support for H3DMH6 as seed ortholog is 100%.

Group of orthologs #972. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 T.nigroviridis:146

L0PEQ2              	100.00%		H3DL97              	100.00%
L0P999              	59.54%		H3CL46              	18.35%
Bootstrap support for L0PEQ2 as seed ortholog is 100%.
Bootstrap support for H3DL97 as seed ortholog is 100%.

Group of orthologs #973. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 T.nigroviridis:80

L0PEX6              	100.00%		H3CU91              	100.00%
                    	       		H3D6A1              	53.77%
Bootstrap support for L0PEX6 as seed ortholog is 97%.
Bootstrap support for H3CU91 as seed ortholog is 99%.

Group of orthologs #974. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 T.nigroviridis:146

L0PCN2              	100.00%		H3C1J2              	100.00%
Bootstrap support for L0PCN2 as seed ortholog is 100%.
Bootstrap support for H3C1J2 as seed ortholog is 100%.

Group of orthologs #975. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 T.nigroviridis:146

L0PBQ0              	100.00%		H3C4T9              	100.00%
Bootstrap support for L0PBQ0 as seed ortholog is 100%.
Bootstrap support for H3C4T9 as seed ortholog is 100%.

Group of orthologs #976. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 T.nigroviridis:146

L0PCK2              	100.00%		Q4S9I2              	100.00%
Bootstrap support for L0PCK2 as seed ortholog is 100%.
Bootstrap support for Q4S9I2 as seed ortholog is 100%.

Group of orthologs #977. Best score 145 bits
Score difference with first non-orthologous sequence - P.jiroveci:145 T.nigroviridis:74

L0P963              	100.00%		H3D2C9              	100.00%
                    	       		Q4RNM8              	69.11%
                    	       		H3D815              	5.89%
Bootstrap support for L0P963 as seed ortholog is 100%.
Bootstrap support for H3D2C9 as seed ortholog is 96%.

Group of orthologs #978. Best score 145 bits
Score difference with first non-orthologous sequence - P.jiroveci:145 T.nigroviridis:145

L0P8Z8              	100.00%		H3CRL2              	100.00%
L0PFN6              	78.43%		
Bootstrap support for L0P8Z8 as seed ortholog is 100%.
Bootstrap support for H3CRL2 as seed ortholog is 100%.

Group of orthologs #979. Best score 145 bits
Score difference with first non-orthologous sequence - P.jiroveci:145 T.nigroviridis:145

L0PAS7              	100.00%		H3CU26              	100.00%
Bootstrap support for L0PAS7 as seed ortholog is 100%.
Bootstrap support for H3CU26 as seed ortholog is 100%.

Group of orthologs #980. Best score 145 bits
Score difference with first non-orthologous sequence - P.jiroveci:145 T.nigroviridis:76

L0PCT4              	100.00%		H3D5Z1              	100.00%
Bootstrap support for L0PCT4 as seed ortholog is 100%.
Bootstrap support for H3D5Z1 as seed ortholog is 97%.

Group of orthologs #981. Best score 145 bits
Score difference with first non-orthologous sequence - P.jiroveci:145 T.nigroviridis:145

L0P852              	100.00%		H3DIX3              	100.00%
Bootstrap support for L0P852 as seed ortholog is 100%.
Bootstrap support for H3DIX3 as seed ortholog is 100%.

Group of orthologs #982. Best score 145 bits
Score difference with first non-orthologous sequence - P.jiroveci:145 T.nigroviridis:145

L0P9F5              	100.00%		Q4RRE0              	100.00%
Bootstrap support for L0P9F5 as seed ortholog is 100%.
Bootstrap support for Q4RRE0 as seed ortholog is 100%.

Group of orthologs #983. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 T.nigroviridis:144

L0PDP1              	100.00%		H3CEW1              	100.00%
L0PFL7              	54.90%		
Bootstrap support for L0PDP1 as seed ortholog is 100%.
Bootstrap support for H3CEW1 as seed ortholog is 100%.

Group of orthologs #984. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 T.nigroviridis:144

L0PD01              	100.00%		H3CR35              	100.00%
L0PF42              	100.00%		
Bootstrap support for L0PD01 as seed ortholog is 100%.
Bootstrap support for L0PF42 as seed ortholog is 100%.
Bootstrap support for H3CR35 as seed ortholog is 100%.

Group of orthologs #985. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 T.nigroviridis:144

L0PCX3              	100.00%		H3DHQ7              	100.00%
                    	       		H3D2D6              	33.22%
Bootstrap support for L0PCX3 as seed ortholog is 100%.
Bootstrap support for H3DHQ7 as seed ortholog is 100%.

Group of orthologs #986. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 T.nigroviridis:144

L0P800              	100.00%		Q4SS97              	100.00%
                    	       		H3D4N1              	56.65%
Bootstrap support for L0P800 as seed ortholog is 100%.
Bootstrap support for Q4SS97 as seed ortholog is 100%.

Group of orthologs #987. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 T.nigroviridis:8

L0PCI0              	100.00%		H3BVJ7              	100.00%
Bootstrap support for L0PCI0 as seed ortholog is 92%.
Bootstrap support for H3BVJ7 as seed ortholog is 55%.
Alternative seed ortholog is H3DK82 (8 bits away from this cluster)

Group of orthologs #988. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 T.nigroviridis:79

L0PBZ4              	100.00%		H3C3F8              	100.00%
Bootstrap support for L0PBZ4 as seed ortholog is 99%.
Bootstrap support for H3C3F8 as seed ortholog is 99%.

Group of orthologs #989. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 T.nigroviridis:144

L0PC24              	100.00%		H3CAD8              	100.00%
Bootstrap support for L0PC24 as seed ortholog is 100%.
Bootstrap support for H3CAD8 as seed ortholog is 100%.

Group of orthologs #990. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 T.nigroviridis:144

L0PEV6              	100.00%		H3CBA5              	100.00%
Bootstrap support for L0PEV6 as seed ortholog is 100%.
Bootstrap support for H3CBA5 as seed ortholog is 100%.

Group of orthologs #991. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 T.nigroviridis:144

L0P880              	100.00%		H3CS47              	100.00%
Bootstrap support for L0P880 as seed ortholog is 100%.
Bootstrap support for H3CS47 as seed ortholog is 100%.

Group of orthologs #992. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 T.nigroviridis:144

L0P780              	100.00%		H3CZ30              	100.00%
Bootstrap support for L0P780 as seed ortholog is 100%.
Bootstrap support for H3CZ30 as seed ortholog is 100%.

Group of orthologs #993. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 T.nigroviridis:57

L0PA07              	100.00%		H3D649              	100.00%
Bootstrap support for L0PA07 as seed ortholog is 100%.
Bootstrap support for H3D649 as seed ortholog is 95%.

Group of orthologs #994. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 T.nigroviridis:144

L0PA83              	100.00%		H3D8R5              	100.00%
Bootstrap support for L0PA83 as seed ortholog is 100%.
Bootstrap support for H3D8R5 as seed ortholog is 100%.

Group of orthologs #995. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 T.nigroviridis:144

L0P9F2              	100.00%		H3DBW7              	100.00%
Bootstrap support for L0P9F2 as seed ortholog is 100%.
Bootstrap support for H3DBW7 as seed ortholog is 100%.

Group of orthologs #996. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 T.nigroviridis:144

L0PEC9              	100.00%		H3DHN7              	100.00%
Bootstrap support for L0PEC9 as seed ortholog is 100%.
Bootstrap support for H3DHN7 as seed ortholog is 100%.

Group of orthologs #997. Best score 143 bits
Score difference with first non-orthologous sequence - P.jiroveci:143 T.nigroviridis:143

L0P778              	100.00%		H3DAZ1              	100.00%
Bootstrap support for L0P778 as seed ortholog is 100%.
Bootstrap support for H3DAZ1 as seed ortholog is 100%.

Group of orthologs #998. Best score 143 bits
Score difference with first non-orthologous sequence - P.jiroveci:143 T.nigroviridis:143

L0PBI8              	100.00%		H3DJV5              	100.00%
Bootstrap support for L0PBI8 as seed ortholog is 100%.
Bootstrap support for H3DJV5 as seed ortholog is 100%.

Group of orthologs #999. Best score 142 bits
Score difference with first non-orthologous sequence - P.jiroveci:142 T.nigroviridis:87

L0PA67              	100.00%		H3D5A7              	100.00%
Bootstrap support for L0PA67 as seed ortholog is 100%.
Bootstrap support for H3D5A7 as seed ortholog is 99%.

Group of orthologs #1000. Best score 142 bits
Score difference with first non-orthologous sequence - P.jiroveci:142 T.nigroviridis:142

L0PBH3              	100.00%		H3DFU6              	100.00%
Bootstrap support for L0PBH3 as seed ortholog is 100%.
Bootstrap support for H3DFU6 as seed ortholog is 100%.

Group of orthologs #1001. Best score 141 bits
Score difference with first non-orthologous sequence - P.jiroveci:141 T.nigroviridis:141

L0PE18              	100.00%		H3BWA6              	100.00%
                    	       		H3DGA8              	13.99%
                    	       		H3CZL4              	11.91%
                    	       		H3D3N3              	11.01%
                    	       		H3CJA6              	10.74%
                    	       		H3CU97              	10.02%
                    	       		H3CFZ4              	8.21%
Bootstrap support for L0PE18 as seed ortholog is 100%.
Bootstrap support for H3BWA6 as seed ortholog is 100%.

Group of orthologs #1002. Best score 141 bits
Score difference with first non-orthologous sequence - P.jiroveci:141 T.nigroviridis:141

L0PB48              	100.00%		H3CP27              	100.00%
Bootstrap support for L0PB48 as seed ortholog is 100%.
Bootstrap support for H3CP27 as seed ortholog is 100%.

Group of orthologs #1003. Best score 141 bits
Score difference with first non-orthologous sequence - P.jiroveci:141 T.nigroviridis:141

L0P7Y4              	100.00%		H3DDM8              	100.00%
Bootstrap support for L0P7Y4 as seed ortholog is 100%.
Bootstrap support for H3DDM8 as seed ortholog is 100%.

Group of orthologs #1004. Best score 140 bits
Score difference with first non-orthologous sequence - P.jiroveci:140 T.nigroviridis:140

L0PAN5              	100.00%		H3DDL0              	100.00%
Bootstrap support for L0PAN5 as seed ortholog is 100%.
Bootstrap support for H3DDL0 as seed ortholog is 100%.

Group of orthologs #1005. Best score 140 bits
Score difference with first non-orthologous sequence - P.jiroveci:140 T.nigroviridis:140

L0PEL6              	100.00%		H3DJG0              	100.00%
Bootstrap support for L0PEL6 as seed ortholog is 100%.
Bootstrap support for H3DJG0 as seed ortholog is 100%.

Group of orthologs #1006. Best score 138 bits
Score difference with first non-orthologous sequence - P.jiroveci:138 T.nigroviridis:60

L0P9F8              	100.00%		H3D1B7              	100.00%
                    	       		H3CQ24              	12.43%
Bootstrap support for L0P9F8 as seed ortholog is 100%.
Bootstrap support for H3D1B7 as seed ortholog is 99%.

Group of orthologs #1007. Best score 138 bits
Score difference with first non-orthologous sequence - P.jiroveci:138 T.nigroviridis:138

L0P6Q5              	100.00%		H3DCX1              	100.00%
                    	       		H3CYF3              	51.19%
Bootstrap support for L0P6Q5 as seed ortholog is 100%.
Bootstrap support for H3DCX1 as seed ortholog is 100%.

Group of orthologs #1008. Best score 138 bits
Score difference with first non-orthologous sequence - P.jiroveci:138 T.nigroviridis:38

L0PEI1              	100.00%		H3BY84              	100.00%
Bootstrap support for L0PEI1 as seed ortholog is 100%.
Bootstrap support for H3BY84 as seed ortholog is 94%.

Group of orthologs #1009. Best score 138 bits
Score difference with first non-orthologous sequence - P.jiroveci:138 T.nigroviridis:138

L0PEG7              	100.00%		H3CM74              	100.00%
Bootstrap support for L0PEG7 as seed ortholog is 100%.
Bootstrap support for H3CM74 as seed ortholog is 100%.

Group of orthologs #1010. Best score 138 bits
Score difference with first non-orthologous sequence - P.jiroveci:138 T.nigroviridis:138

L0PAY0              	100.00%		H3DIP1              	100.00%
Bootstrap support for L0PAY0 as seed ortholog is 100%.
Bootstrap support for H3DIP1 as seed ortholog is 100%.

Group of orthologs #1011. Best score 137 bits
Score difference with first non-orthologous sequence - P.jiroveci:137 T.nigroviridis:137

L0PDW9              	100.00%		Q4SKA3              	100.00%
Bootstrap support for L0PDW9 as seed ortholog is 100%.
Bootstrap support for Q4SKA3 as seed ortholog is 100%.

Group of orthologs #1012. Best score 136 bits
Score difference with first non-orthologous sequence - P.jiroveci:136 T.nigroviridis:136

L0PCC6              	100.00%		H3CI26              	100.00%
                    	       		H3D2F2              	29.86%
                    	       		H3D5A9              	14.50%
Bootstrap support for L0PCC6 as seed ortholog is 100%.
Bootstrap support for H3CI26 as seed ortholog is 100%.

Group of orthologs #1013. Best score 136 bits
Score difference with first non-orthologous sequence - P.jiroveci:136 T.nigroviridis:136

L0PDW7              	100.00%		H3D9G2              	100.00%
L0PIN1              	59.22%		
Bootstrap support for L0PDW7 as seed ortholog is 100%.
Bootstrap support for H3D9G2 as seed ortholog is 100%.

Group of orthologs #1014. Best score 136 bits
Score difference with first non-orthologous sequence - P.jiroveci:136 T.nigroviridis:136

L0PET6              	100.00%		H3CX06              	100.00%
Bootstrap support for L0PET6 as seed ortholog is 100%.
Bootstrap support for H3CX06 as seed ortholog is 100%.

Group of orthologs #1015. Best score 135 bits
Score difference with first non-orthologous sequence - P.jiroveci:135 T.nigroviridis:135

L0P9E5              	100.00%		H3CST6              	100.00%
Bootstrap support for L0P9E5 as seed ortholog is 100%.
Bootstrap support for H3CST6 as seed ortholog is 100%.

Group of orthologs #1016. Best score 135 bits
Score difference with first non-orthologous sequence - P.jiroveci:135 T.nigroviridis:135

L0PFP4              	100.00%		H3DJQ2              	100.00%
Bootstrap support for L0PFP4 as seed ortholog is 100%.
Bootstrap support for H3DJQ2 as seed ortholog is 100%.

Group of orthologs #1017. Best score 135 bits
Score difference with first non-orthologous sequence - P.jiroveci:135 T.nigroviridis:135

L0P806              	100.00%		Q4SZN8              	100.00%
Bootstrap support for L0P806 as seed ortholog is 100%.
Bootstrap support for Q4SZN8 as seed ortholog is 100%.

Group of orthologs #1018. Best score 134 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 T.nigroviridis:134

L0P9T1              	100.00%		H3CV93              	100.00%
Bootstrap support for L0P9T1 as seed ortholog is 100%.
Bootstrap support for H3CV93 as seed ortholog is 100%.

Group of orthologs #1019. Best score 134 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 T.nigroviridis:134

L0PFR0              	100.00%		H3CQ14              	100.00%
Bootstrap support for L0PFR0 as seed ortholog is 100%.
Bootstrap support for H3CQ14 as seed ortholog is 100%.

Group of orthologs #1020. Best score 134 bits
Score difference with first non-orthologous sequence - P.jiroveci:69 T.nigroviridis:134

L0PEI9              	100.00%		H3D1Z3              	100.00%
Bootstrap support for L0PEI9 as seed ortholog is 99%.
Bootstrap support for H3D1Z3 as seed ortholog is 100%.

Group of orthologs #1021. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 T.nigroviridis:133

L0PE36              	100.00%		H3C6F4              	100.00%
                    	       		H3DMT0              	41.03%
Bootstrap support for L0PE36 as seed ortholog is 100%.
Bootstrap support for H3C6F4 as seed ortholog is 100%.

Group of orthologs #1022. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 T.nigroviridis:133

L0P7K4              	100.00%		H3CTQ6              	100.00%
L0P859              	81.89%		
Bootstrap support for L0P7K4 as seed ortholog is 100%.
Bootstrap support for H3CTQ6 as seed ortholog is 100%.

Group of orthologs #1023. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 T.nigroviridis:133

L0P8M3              	100.00%		H3C630              	100.00%
Bootstrap support for L0P8M3 as seed ortholog is 100%.
Bootstrap support for H3C630 as seed ortholog is 100%.

Group of orthologs #1024. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 T.nigroviridis:133

L0PE09              	100.00%		H3D6P3              	100.00%
Bootstrap support for L0PE09 as seed ortholog is 100%.
Bootstrap support for H3D6P3 as seed ortholog is 100%.

Group of orthologs #1025. Best score 132 bits
Score difference with first non-orthologous sequence - P.jiroveci:132 T.nigroviridis:132

L0PEB8              	100.00%		H3D7G4              	100.00%
                    	       		H3CBE8              	42.55%
Bootstrap support for L0PEB8 as seed ortholog is 100%.
Bootstrap support for H3D7G4 as seed ortholog is 100%.

Group of orthologs #1026. Best score 132 bits
Score difference with first non-orthologous sequence - P.jiroveci:132 T.nigroviridis:132

L0P948              	100.00%		H3C498              	100.00%
Bootstrap support for L0P948 as seed ortholog is 100%.
Bootstrap support for H3C498 as seed ortholog is 100%.

Group of orthologs #1027. Best score 132 bits
Score difference with first non-orthologous sequence - P.jiroveci:132 T.nigroviridis:132

L0PFZ8              	100.00%		H3CWU9              	100.00%
Bootstrap support for L0PFZ8 as seed ortholog is 100%.
Bootstrap support for H3CWU9 as seed ortholog is 100%.

Group of orthologs #1028. Best score 132 bits
Score difference with first non-orthologous sequence - P.jiroveci:132 T.nigroviridis:132

L0P7V8              	100.00%		H3DNF7              	100.00%
Bootstrap support for L0P7V8 as seed ortholog is 100%.
Bootstrap support for H3DNF7 as seed ortholog is 100%.

Group of orthologs #1029. Best score 132 bits
Score difference with first non-orthologous sequence - P.jiroveci:132 T.nigroviridis:132

L0PEV3              	100.00%		H3DHZ8              	100.00%
Bootstrap support for L0PEV3 as seed ortholog is 100%.
Bootstrap support for H3DHZ8 as seed ortholog is 100%.

Group of orthologs #1030. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 T.nigroviridis:131

L0PDX2              	100.00%		H3BZ14              	100.00%
Bootstrap support for L0PDX2 as seed ortholog is 100%.
Bootstrap support for H3BZ14 as seed ortholog is 100%.

Group of orthologs #1031. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 T.nigroviridis:131

L0PDN8              	100.00%		H3CA71              	100.00%
Bootstrap support for L0PDN8 as seed ortholog is 100%.
Bootstrap support for H3CA71 as seed ortholog is 100%.

Group of orthologs #1032. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 T.nigroviridis:131

L0P9I6              	100.00%		H3D5X1              	100.00%
Bootstrap support for L0P9I6 as seed ortholog is 100%.
Bootstrap support for H3D5X1 as seed ortholog is 100%.

Group of orthologs #1033. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 T.nigroviridis:88

L0PG59              	100.00%		H3D1U5              	100.00%
Bootstrap support for L0PG59 as seed ortholog is 100%.
Bootstrap support for H3D1U5 as seed ortholog is 99%.

Group of orthologs #1034. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 T.nigroviridis:131

L0PFS7              	100.00%		H3D4C7              	100.00%
Bootstrap support for L0PFS7 as seed ortholog is 100%.
Bootstrap support for H3D4C7 as seed ortholog is 100%.

Group of orthologs #1035. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 T.nigroviridis:68

L0PA97              	100.00%		Q4RZP4              	100.00%
Bootstrap support for L0PA97 as seed ortholog is 100%.
Bootstrap support for Q4RZP4 as seed ortholog is 99%.

Group of orthologs #1036. Best score 130 bits
Score difference with first non-orthologous sequence - P.jiroveci:130 T.nigroviridis:130

L0P957              	100.00%		H3D0J3              	100.00%
                    	       		H3CJB7              	22.73%
Bootstrap support for L0P957 as seed ortholog is 100%.
Bootstrap support for H3D0J3 as seed ortholog is 100%.

Group of orthologs #1037. Best score 130 bits
Score difference with first non-orthologous sequence - P.jiroveci:130 T.nigroviridis:130

L0P8Z0              	100.00%		H3D7U8              	100.00%
L0PC60              	96.82%		
Bootstrap support for L0P8Z0 as seed ortholog is 100%.
Bootstrap support for H3D7U8 as seed ortholog is 100%.

Group of orthologs #1038. Best score 130 bits
Score difference with first non-orthologous sequence - P.jiroveci:130 T.nigroviridis:130

L0P8G0              	100.00%		H3CNX2              	100.00%
Bootstrap support for L0P8G0 as seed ortholog is 100%.
Bootstrap support for H3CNX2 as seed ortholog is 100%.

Group of orthologs #1039. Best score 130 bits
Score difference with first non-orthologous sequence - P.jiroveci:130 T.nigroviridis:130

L0PAA1              	100.00%		H3DM11              	100.00%
Bootstrap support for L0PAA1 as seed ortholog is 100%.
Bootstrap support for H3DM11 as seed ortholog is 100%.

Group of orthologs #1040. Best score 130 bits
Score difference with first non-orthologous sequence - P.jiroveci:130 T.nigroviridis:130

L0PAZ1              	100.00%		Q4SCJ6              	100.00%
Bootstrap support for L0PAZ1 as seed ortholog is 100%.
Bootstrap support for Q4SCJ6 as seed ortholog is 100%.

Group of orthologs #1041. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 T.nigroviridis:84

L0PBX0              	100.00%		H3CTK3              	100.00%
                    	       		Q4SE12              	31.96%
Bootstrap support for L0PBX0 as seed ortholog is 100%.
Bootstrap support for H3CTK3 as seed ortholog is 99%.

Group of orthologs #1042. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 T.nigroviridis:129

L0P938              	100.00%		H3DQT5              	100.00%
                    	       		H3DC53              	20.00%
Bootstrap support for L0P938 as seed ortholog is 100%.
Bootstrap support for H3DQT5 as seed ortholog is 100%.

Group of orthologs #1043. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 T.nigroviridis:24

L0PBX9              	100.00%		H3CDK2              	100.00%
Bootstrap support for L0PBX9 as seed ortholog is 100%.
Bootstrap support for H3CDK2 as seed ortholog is 68%.
Alternative seed ortholog is H3CJR5 (24 bits away from this cluster)

Group of orthologs #1044. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 T.nigroviridis:129

L0PDE3              	100.00%		H3CP11              	100.00%
Bootstrap support for L0PDE3 as seed ortholog is 100%.
Bootstrap support for H3CP11 as seed ortholog is 100%.

Group of orthologs #1045. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 T.nigroviridis:129

L0PB69              	100.00%		H3D0M5              	100.00%
Bootstrap support for L0PB69 as seed ortholog is 100%.
Bootstrap support for H3D0M5 as seed ortholog is 100%.

Group of orthologs #1046. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 T.nigroviridis:129

L0PC08              	100.00%		H3DEG0              	100.00%
Bootstrap support for L0PC08 as seed ortholog is 100%.
Bootstrap support for H3DEG0 as seed ortholog is 100%.

Group of orthologs #1047. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 T.nigroviridis:128

L0P7U6              	100.00%		H3CL21              	100.00%
Bootstrap support for L0P7U6 as seed ortholog is 100%.
Bootstrap support for H3CL21 as seed ortholog is 100%.

Group of orthologs #1048. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:47 T.nigroviridis:128

L0PIT4              	100.00%		H3CL26              	100.00%
Bootstrap support for L0PIT4 as seed ortholog is 95%.
Bootstrap support for H3CL26 as seed ortholog is 100%.

Group of orthologs #1049. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 T.nigroviridis:128

L0P940              	100.00%		H3DAK4              	100.00%
Bootstrap support for L0P940 as seed ortholog is 100%.
Bootstrap support for H3DAK4 as seed ortholog is 100%.

Group of orthologs #1050. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 T.nigroviridis:128

L0PDE5              	100.00%		H3DMK4              	100.00%
Bootstrap support for L0PDE5 as seed ortholog is 100%.
Bootstrap support for H3DMK4 as seed ortholog is 100%.

Group of orthologs #1051. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 T.nigroviridis:128

L0PG28              	100.00%		Q4SLI5              	100.00%
Bootstrap support for L0PG28 as seed ortholog is 100%.
Bootstrap support for Q4SLI5 as seed ortholog is 100%.

Group of orthologs #1052. Best score 127 bits
Score difference with first non-orthologous sequence - P.jiroveci:127 T.nigroviridis:127

L0PCA3              	100.00%		H3DG28              	100.00%
                    	       		H3CSQ9              	20.33%
                    	       		Q4RSN7              	20.05%
Bootstrap support for L0PCA3 as seed ortholog is 100%.
Bootstrap support for H3DG28 as seed ortholog is 100%.

Group of orthologs #1053. Best score 127 bits
Score difference with first non-orthologous sequence - P.jiroveci:127 T.nigroviridis:127

L0PG06              	100.00%		H3DF93              	100.00%
                    	       		H3D4D2              	52.31%
                    	       		H3CZ87              	51.09%
Bootstrap support for L0PG06 as seed ortholog is 100%.
Bootstrap support for H3DF93 as seed ortholog is 100%.

Group of orthologs #1054. Best score 127 bits
Score difference with first non-orthologous sequence - P.jiroveci:127 T.nigroviridis:78

L0P7A4              	100.00%		H3CA04              	100.00%
Bootstrap support for L0P7A4 as seed ortholog is 100%.
Bootstrap support for H3CA04 as seed ortholog is 96%.

Group of orthologs #1055. Best score 127 bits
Score difference with first non-orthologous sequence - P.jiroveci:127 T.nigroviridis:127

L0PFP3              	100.00%		H3CQ79              	100.00%
Bootstrap support for L0PFP3 as seed ortholog is 100%.
Bootstrap support for H3CQ79 as seed ortholog is 100%.

Group of orthologs #1056. Best score 127 bits
Score difference with first non-orthologous sequence - P.jiroveci:127 T.nigroviridis:127

L0P9B0              	100.00%		H3DKE3              	100.00%
Bootstrap support for L0P9B0 as seed ortholog is 100%.
Bootstrap support for H3DKE3 as seed ortholog is 100%.

Group of orthologs #1057. Best score 126 bits
Score difference with first non-orthologous sequence - P.jiroveci:126 T.nigroviridis:64

L0PF38              	100.00%		H3CHN5              	100.00%
Bootstrap support for L0PF38 as seed ortholog is 100%.
Bootstrap support for H3CHN5 as seed ortholog is 98%.

Group of orthologs #1058. Best score 126 bits
Score difference with first non-orthologous sequence - P.jiroveci:126 T.nigroviridis:126

L0PE48              	100.00%		H3DGA9              	100.00%
Bootstrap support for L0PE48 as seed ortholog is 100%.
Bootstrap support for H3DGA9 as seed ortholog is 100%.

Group of orthologs #1059. Best score 125 bits
Score difference with first non-orthologous sequence - P.jiroveci:125 T.nigroviridis:40

L0P9Q9              	100.00%		H3CCR6              	100.00%
                    	       		H3DJT1              	12.04%
                    	       		H3CRI3              	8.82%
                    	       		Q4S0I8              	5.74%
Bootstrap support for L0P9Q9 as seed ortholog is 100%.
Bootstrap support for H3CCR6 as seed ortholog is 97%.

Group of orthologs #1060. Best score 125 bits
Score difference with first non-orthologous sequence - P.jiroveci:125 T.nigroviridis:125

L0PFX0              	100.00%		H3DAX6              	100.00%
                    	       		H3DMF4              	37.53%
Bootstrap support for L0PFX0 as seed ortholog is 100%.
Bootstrap support for H3DAX6 as seed ortholog is 100%.

Group of orthologs #1061. Best score 125 bits
Score difference with first non-orthologous sequence - P.jiroveci:125 T.nigroviridis:25

L0PEJ6              	100.00%		H3BWV6              	100.00%
Bootstrap support for L0PEJ6 as seed ortholog is 100%.
Bootstrap support for H3BWV6 as seed ortholog is 74%.
Alternative seed ortholog is H3DBX0 (25 bits away from this cluster)

Group of orthologs #1062. Best score 125 bits
Score difference with first non-orthologous sequence - P.jiroveci:125 T.nigroviridis:125

L0PCI9              	100.00%		H3CU49              	100.00%
Bootstrap support for L0PCI9 as seed ortholog is 100%.
Bootstrap support for H3CU49 as seed ortholog is 100%.

Group of orthologs #1063. Best score 125 bits
Score difference with first non-orthologous sequence - P.jiroveci:125 T.nigroviridis:125

L0PCX8              	100.00%		H3CUV5              	100.00%
Bootstrap support for L0PCX8 as seed ortholog is 100%.
Bootstrap support for H3CUV5 as seed ortholog is 100%.

Group of orthologs #1064. Best score 125 bits
Score difference with first non-orthologous sequence - P.jiroveci:125 T.nigroviridis:125

L0P935              	100.00%		H3DL59              	100.00%
Bootstrap support for L0P935 as seed ortholog is 100%.
Bootstrap support for H3DL59 as seed ortholog is 100%.

Group of orthologs #1065. Best score 125 bits
Score difference with first non-orthologous sequence - P.jiroveci:125 T.nigroviridis:125

L0P9L0              	100.00%		Q4RHC2              	100.00%
Bootstrap support for L0P9L0 as seed ortholog is 100%.
Bootstrap support for Q4RHC2 as seed ortholog is 100%.

Group of orthologs #1066. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 T.nigroviridis:124

L0PDR9              	100.00%		H3CYR1              	100.00%
L0P8I3              	73.74%		
Bootstrap support for L0PDR9 as seed ortholog is 100%.
Bootstrap support for H3CYR1 as seed ortholog is 100%.

Group of orthologs #1067. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 T.nigroviridis:124

L0PGC9              	100.00%		Q4S5V3              	100.00%
                    	       		Q4RTJ2              	80.21%
Bootstrap support for L0PGC9 as seed ortholog is 100%.
Bootstrap support for Q4S5V3 as seed ortholog is 100%.

Group of orthologs #1068. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:42 T.nigroviridis:1

L0PAR1              	100.00%		H3CX90              	100.00%
Bootstrap support for L0PAR1 as seed ortholog is 86%.
Bootstrap support for H3CX90 as seed ortholog is 52%.
Alternative seed ortholog is H3CQS9 (1 bits away from this cluster)

Group of orthologs #1069. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 T.nigroviridis:124

L0PG87              	100.00%		H3DI59              	100.00%
Bootstrap support for L0PG87 as seed ortholog is 100%.
Bootstrap support for H3DI59 as seed ortholog is 100%.

Group of orthologs #1070. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 T.nigroviridis:124

L0PBG3              	100.00%		Q4S7R6              	100.00%
Bootstrap support for L0PBG3 as seed ortholog is 100%.
Bootstrap support for Q4S7R6 as seed ortholog is 100%.

Group of orthologs #1071. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 T.nigroviridis:124

L0PD77              	100.00%		Q4S6V6              	100.00%
Bootstrap support for L0PD77 as seed ortholog is 99%.
Bootstrap support for Q4S6V6 as seed ortholog is 100%.

Group of orthologs #1072. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 T.nigroviridis:124

L0PF16              	100.00%		Q4SLF5              	100.00%
Bootstrap support for L0PF16 as seed ortholog is 100%.
Bootstrap support for Q4SLF5 as seed ortholog is 100%.

Group of orthologs #1073. Best score 123 bits
Score difference with first non-orthologous sequence - P.jiroveci:123 T.nigroviridis:123

L0P8G3              	100.00%		H3CGN4              	100.00%
                    	       		H3D1I1              	41.12%
Bootstrap support for L0P8G3 as seed ortholog is 100%.
Bootstrap support for H3CGN4 as seed ortholog is 100%.

Group of orthologs #1074. Best score 123 bits
Score difference with first non-orthologous sequence - P.jiroveci:123 T.nigroviridis:123

L0P799              	100.00%		H3D6V2              	100.00%
Bootstrap support for L0P799 as seed ortholog is 100%.
Bootstrap support for H3D6V2 as seed ortholog is 100%.

Group of orthologs #1075. Best score 123 bits
Score difference with first non-orthologous sequence - P.jiroveci:123 T.nigroviridis:123

L0P8A3              	100.00%		H3D684              	100.00%
Bootstrap support for L0P8A3 as seed ortholog is 100%.
Bootstrap support for H3D684 as seed ortholog is 100%.

Group of orthologs #1076. Best score 123 bits
Score difference with first non-orthologous sequence - P.jiroveci:123 T.nigroviridis:123

L0PB59              	100.00%		H3D2U0              	100.00%
Bootstrap support for L0PB59 as seed ortholog is 100%.
Bootstrap support for H3D2U0 as seed ortholog is 100%.

Group of orthologs #1077. Best score 123 bits
Score difference with first non-orthologous sequence - P.jiroveci:123 T.nigroviridis:123

L0PFV4              	100.00%		H3CWG3              	100.00%
Bootstrap support for L0PFV4 as seed ortholog is 100%.
Bootstrap support for H3CWG3 as seed ortholog is 100%.

Group of orthologs #1078. Best score 123 bits
Score difference with first non-orthologous sequence - P.jiroveci:123 T.nigroviridis:17

L0P984              	100.00%		Q4RMK4              	100.00%
Bootstrap support for L0P984 as seed ortholog is 100%.
Bootstrap support for Q4RMK4 as seed ortholog is 66%.
Alternative seed ortholog is H3CJ92 (17 bits away from this cluster)

Group of orthologs #1079. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 T.nigroviridis:122

L0P8W1              	100.00%		H3CN61              	100.00%
Bootstrap support for L0P8W1 as seed ortholog is 100%.
Bootstrap support for H3CN61 as seed ortholog is 100%.

Group of orthologs #1080. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 T.nigroviridis:122

L0PD12              	100.00%		H3CS51              	100.00%
Bootstrap support for L0PD12 as seed ortholog is 100%.
Bootstrap support for H3CS51 as seed ortholog is 100%.

Group of orthologs #1081. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 T.nigroviridis:122

L0PF62              	100.00%		H3CPX7              	100.00%
Bootstrap support for L0PF62 as seed ortholog is 100%.
Bootstrap support for H3CPX7 as seed ortholog is 100%.

Group of orthologs #1082. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 T.nigroviridis:122

L0P7N9              	100.00%		H3D5W5              	100.00%
Bootstrap support for L0P7N9 as seed ortholog is 100%.
Bootstrap support for H3D5W5 as seed ortholog is 100%.

Group of orthologs #1083. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 T.nigroviridis:122

L0PF09              	100.00%		H3D1E8              	100.00%
Bootstrap support for L0PF09 as seed ortholog is 100%.
Bootstrap support for H3D1E8 as seed ortholog is 100%.

Group of orthologs #1084. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 T.nigroviridis:122

L0PEZ8              	100.00%		H3DDK9              	100.00%
Bootstrap support for L0PEZ8 as seed ortholog is 100%.
Bootstrap support for H3DDK9 as seed ortholog is 100%.

Group of orthologs #1085. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 T.nigroviridis:122

L0P7W6              	100.00%		H3DQ83              	100.00%
Bootstrap support for L0P7W6 as seed ortholog is 100%.
Bootstrap support for H3DQ83 as seed ortholog is 100%.

Group of orthologs #1086. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 T.nigroviridis:122

L0PF95              	100.00%		H3DHI5              	100.00%
Bootstrap support for L0PF95 as seed ortholog is 100%.
Bootstrap support for H3DHI5 as seed ortholog is 100%.

Group of orthologs #1087. Best score 121 bits
Score difference with first non-orthologous sequence - P.jiroveci:121 T.nigroviridis:74

L0PBU1              	100.00%		H3D410              	100.00%
                    	       		H3DLJ4              	59.15%
Bootstrap support for L0PBU1 as seed ortholog is 100%.
Bootstrap support for H3D410 as seed ortholog is 99%.

Group of orthologs #1088. Best score 121 bits
Score difference with first non-orthologous sequence - P.jiroveci:121 T.nigroviridis:121

L0P746              	100.00%		H3C5S9              	100.00%
Bootstrap support for L0P746 as seed ortholog is 100%.
Bootstrap support for H3C5S9 as seed ortholog is 100%.

Group of orthologs #1089. Best score 121 bits
Score difference with first non-orthologous sequence - P.jiroveci:121 T.nigroviridis:121

L0P7A1              	100.00%		H3C6E4              	100.00%
Bootstrap support for L0P7A1 as seed ortholog is 100%.
Bootstrap support for H3C6E4 as seed ortholog is 100%.

Group of orthologs #1090. Best score 121 bits
Score difference with first non-orthologous sequence - P.jiroveci:121 T.nigroviridis:121

L0PFM7              	100.00%		Q4TC27              	100.00%
Bootstrap support for L0PFM7 as seed ortholog is 100%.
Bootstrap support for Q4TC27 as seed ortholog is 100%.

Group of orthologs #1091. Best score 120 bits
Score difference with first non-orthologous sequence - P.jiroveci:120 T.nigroviridis:5

L0PDT8              	100.00%		H3DG66              	100.00%
L0P9R2              	92.68%		
Bootstrap support for L0PDT8 as seed ortholog is 100%.
Bootstrap support for H3DG66 as seed ortholog is 54%.
Alternative seed ortholog is H3CC05 (5 bits away from this cluster)

Group of orthologs #1092. Best score 120 bits
Score difference with first non-orthologous sequence - P.jiroveci:120 T.nigroviridis:120

L0PIR4              	100.00%		H3CLD4              	100.00%
Bootstrap support for L0PIR4 as seed ortholog is 100%.
Bootstrap support for H3CLD4 as seed ortholog is 100%.

Group of orthologs #1093. Best score 120 bits
Score difference with first non-orthologous sequence - P.jiroveci:120 T.nigroviridis:120

L0PB27              	100.00%		Q4T5T8              	100.00%
Bootstrap support for L0PB27 as seed ortholog is 100%.
Bootstrap support for Q4T5T8 as seed ortholog is 100%.

Group of orthologs #1094. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:30 T.nigroviridis:119

L0PDY7              	100.00%		H3DNH5              	100.00%
                    	       		H3DL01              	18.23%
                    	       		H3C4V9              	9.99%
Bootstrap support for L0PDY7 as seed ortholog is 81%.
Bootstrap support for H3DNH5 as seed ortholog is 100%.

Group of orthologs #1095. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 T.nigroviridis:119

L0P990              	100.00%		H3CM66              	100.00%
                    	       		H3CJZ3              	42.04%
Bootstrap support for L0P990 as seed ortholog is 100%.
Bootstrap support for H3CM66 as seed ortholog is 100%.

Group of orthologs #1096. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 T.nigroviridis:119

L0PG04              	100.00%		Q4S8I7              	100.00%
                    	       		H3CWN7              	48.28%
Bootstrap support for L0PG04 as seed ortholog is 100%.
Bootstrap support for Q4S8I7 as seed ortholog is 100%.

Group of orthologs #1097. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 T.nigroviridis:119

L0PBX4              	100.00%		H3CWV9              	100.00%
Bootstrap support for L0PBX4 as seed ortholog is 100%.
Bootstrap support for H3CWV9 as seed ortholog is 100%.

Group of orthologs #1098. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 T.nigroviridis:119

L0PG46              	100.00%		Q4RSM2              	100.00%
Bootstrap support for L0PG46 as seed ortholog is 100%.
Bootstrap support for Q4RSM2 as seed ortholog is 100%.

Group of orthologs #1099. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 T.nigroviridis:24

L0P9W8              	100.00%		H3CCP6              	100.00%
L0PH99              	63.19%		H3C7M7              	13.08%
                    	       		H3DMU2              	12.67%
Bootstrap support for L0P9W8 as seed ortholog is 100%.
Bootstrap support for H3CCP6 as seed ortholog is 72%.
Alternative seed ortholog is H3CZN9 (24 bits away from this cluster)

Group of orthologs #1100. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 T.nigroviridis:118

L0PEI6              	100.00%		H3CPL0              	100.00%
Bootstrap support for L0PEI6 as seed ortholog is 100%.
Bootstrap support for H3CPL0 as seed ortholog is 100%.

Group of orthologs #1101. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 T.nigroviridis:118

L0PBW0              	100.00%		H3CY03              	100.00%
Bootstrap support for L0PBW0 as seed ortholog is 100%.
Bootstrap support for H3CY03 as seed ortholog is 100%.

Group of orthologs #1102. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 T.nigroviridis:118

L0PBR1              	100.00%		Q4RIG8              	100.00%
Bootstrap support for L0PBR1 as seed ortholog is 100%.
Bootstrap support for Q4RIG8 as seed ortholog is 100%.

Group of orthologs #1103. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 T.nigroviridis:118

L0PFZ3              	100.00%		Q4SMI6              	100.00%
Bootstrap support for L0PFZ3 as seed ortholog is 100%.
Bootstrap support for Q4SMI6 as seed ortholog is 100%.

Group of orthologs #1104. Best score 117 bits
Score difference with first non-orthologous sequence - P.jiroveci:117 T.nigroviridis:117

L0PD60              	100.00%		H3CJ87              	100.00%
Bootstrap support for L0PD60 as seed ortholog is 100%.
Bootstrap support for H3CJ87 as seed ortholog is 100%.

Group of orthologs #1105. Best score 117 bits
Score difference with first non-orthologous sequence - P.jiroveci:117 T.nigroviridis:117

L0PHQ1              	100.00%		H3CV62              	100.00%
Bootstrap support for L0PHQ1 as seed ortholog is 100%.
Bootstrap support for H3CV62 as seed ortholog is 100%.

Group of orthologs #1106. Best score 117 bits
Score difference with first non-orthologous sequence - P.jiroveci:117 T.nigroviridis:117

L0PD00              	100.00%		Q4RIE5              	100.00%
Bootstrap support for L0PD00 as seed ortholog is 100%.
Bootstrap support for Q4RIE5 as seed ortholog is 100%.

Group of orthologs #1107. Best score 116 bits
Score difference with first non-orthologous sequence - P.jiroveci:116 T.nigroviridis:116

L0PGF6              	100.00%		H3D633              	100.00%
                    	       		H3CI19              	38.57%
Bootstrap support for L0PGF6 as seed ortholog is 100%.
Bootstrap support for H3D633 as seed ortholog is 100%.

Group of orthologs #1108. Best score 116 bits
Score difference with first non-orthologous sequence - P.jiroveci:116 T.nigroviridis:116

L0PA35              	100.00%		H3CNH9              	100.00%
Bootstrap support for L0PA35 as seed ortholog is 100%.
Bootstrap support for H3CNH9 as seed ortholog is 100%.

Group of orthologs #1109. Best score 116 bits
Score difference with first non-orthologous sequence - P.jiroveci:116 T.nigroviridis:116

L0PD37              	100.00%		H3D5V0              	100.00%
Bootstrap support for L0PD37 as seed ortholog is 100%.
Bootstrap support for H3D5V0 as seed ortholog is 100%.

Group of orthologs #1110. Best score 116 bits
Score difference with first non-orthologous sequence - P.jiroveci:116 T.nigroviridis:116

L0P9V3              	100.00%		H3DEK9              	100.00%
Bootstrap support for L0P9V3 as seed ortholog is 100%.
Bootstrap support for H3DEK9 as seed ortholog is 100%.

Group of orthologs #1111. Best score 116 bits
Score difference with first non-orthologous sequence - P.jiroveci:116 T.nigroviridis:116

L0P9A7              	100.00%		Q4SYV4              	100.00%
Bootstrap support for L0P9A7 as seed ortholog is 100%.
Bootstrap support for Q4SYV4 as seed ortholog is 100%.

Group of orthologs #1112. Best score 115 bits
Score difference with first non-orthologous sequence - P.jiroveci:115 T.nigroviridis:115

L0PHI9              	100.00%		H3CFJ1              	100.00%
                    	       		H3CE38              	12.04%
                    	       		H3CFM4              	8.83%
                    	       		H3DFI7              	8.58%
                    	       		H3D8D2              	8.45%
                    	       		H3DN44              	8.45%
                    	       		H3CRL1              	6.79%
                    	       		H3D8D6              	6.79%
                    	       		H3DE99              	6.27%
                    	       		H3DPR6              	6.27%
                    	       		H3BXU6              	6.27%
                    	       		H3CA39              	6.27%
                    	       		H3CG39              	6.27%
                    	       		H3CXE9              	5.25%
Bootstrap support for L0PHI9 as seed ortholog is 100%.
Bootstrap support for H3CFJ1 as seed ortholog is 100%.

Group of orthologs #1113. Best score 115 bits
Score difference with first non-orthologous sequence - P.jiroveci:115 T.nigroviridis:115

L0PEZ7              	100.00%		H3CGW9              	100.00%
                    	       		H3CHX5              	45.59%
Bootstrap support for L0PEZ7 as seed ortholog is 100%.
Bootstrap support for H3CGW9 as seed ortholog is 100%.

Group of orthologs #1114. Best score 115 bits
Score difference with first non-orthologous sequence - P.jiroveci:115 T.nigroviridis:115

L0P733              	100.00%		H3CG50              	100.00%
Bootstrap support for L0P733 as seed ortholog is 100%.
Bootstrap support for H3CG50 as seed ortholog is 100%.

Group of orthologs #1115. Best score 115 bits
Score difference with first non-orthologous sequence - P.jiroveci:115 T.nigroviridis:115

L0PBQ3              	100.00%		H3D8X1              	100.00%
Bootstrap support for L0PBQ3 as seed ortholog is 100%.
Bootstrap support for H3D8X1 as seed ortholog is 100%.

Group of orthologs #1116. Best score 115 bits
Score difference with first non-orthologous sequence - P.jiroveci:115 T.nigroviridis:115

L0PHM1              	100.00%		Q4SNQ2              	100.00%
Bootstrap support for L0PHM1 as seed ortholog is 100%.
Bootstrap support for Q4SNQ2 as seed ortholog is 100%.

Group of orthologs #1117. Best score 114 bits
Score difference with first non-orthologous sequence - P.jiroveci:114 T.nigroviridis:114

L0PCX0              	100.00%		H3CMX4              	100.00%
Bootstrap support for L0PCX0 as seed ortholog is 100%.
Bootstrap support for H3CMX4 as seed ortholog is 100%.

Group of orthologs #1118. Best score 114 bits
Score difference with first non-orthologous sequence - P.jiroveci:114 T.nigroviridis:114

L0P8L2              	100.00%		H3CUE5              	100.00%
Bootstrap support for L0P8L2 as seed ortholog is 100%.
Bootstrap support for H3CUE5 as seed ortholog is 100%.

Group of orthologs #1119. Best score 114 bits
Score difference with first non-orthologous sequence - P.jiroveci:114 T.nigroviridis:114

L0PFP7              	100.00%		H3DES1              	100.00%
Bootstrap support for L0PFP7 as seed ortholog is 100%.
Bootstrap support for H3DES1 as seed ortholog is 100%.

Group of orthologs #1120. Best score 114 bits
Score difference with first non-orthologous sequence - P.jiroveci:114 T.nigroviridis:114

L0PD75              	100.00%		H3DJS4              	100.00%
Bootstrap support for L0PD75 as seed ortholog is 100%.
Bootstrap support for H3DJS4 as seed ortholog is 100%.

Group of orthologs #1121. Best score 113 bits
Score difference with first non-orthologous sequence - P.jiroveci:113 T.nigroviridis:71

L0P6Z5              	100.00%		H3DMR5              	100.00%
                    	       		H3D194              	32.35%
                    	       		H3CWA6              	25.64%
Bootstrap support for L0P6Z5 as seed ortholog is 100%.
Bootstrap support for H3DMR5 as seed ortholog is 96%.

Group of orthologs #1122. Best score 113 bits
Score difference with first non-orthologous sequence - P.jiroveci:113 T.nigroviridis:37

L0PA43              	100.00%		H3CBX7              	100.00%
                    	       		H3D054              	28.40%
Bootstrap support for L0PA43 as seed ortholog is 100%.
Bootstrap support for H3CBX7 as seed ortholog is 96%.

Group of orthologs #1123. Best score 113 bits
Score difference with first non-orthologous sequence - P.jiroveci:113 T.nigroviridis:113

L0PG73              	100.00%		H3D0X2              	100.00%
Bootstrap support for L0PG73 as seed ortholog is 100%.
Bootstrap support for H3D0X2 as seed ortholog is 100%.

Group of orthologs #1124. Best score 113 bits
Score difference with first non-orthologous sequence - P.jiroveci:113 T.nigroviridis:113

L0PEW9              	100.00%		H3DCA4              	100.00%
Bootstrap support for L0PEW9 as seed ortholog is 100%.
Bootstrap support for H3DCA4 as seed ortholog is 100%.

Group of orthologs #1125. Best score 113 bits
Score difference with first non-orthologous sequence - P.jiroveci:113 T.nigroviridis:113

L0PF45              	100.00%		H3DGB9              	100.00%
Bootstrap support for L0PF45 as seed ortholog is 100%.
Bootstrap support for H3DGB9 as seed ortholog is 100%.

Group of orthologs #1126. Best score 112 bits
Score difference with first non-orthologous sequence - P.jiroveci:112 T.nigroviridis:112

L0PCT7              	100.00%		H3C5U9              	100.00%
Bootstrap support for L0PCT7 as seed ortholog is 100%.
Bootstrap support for H3C5U9 as seed ortholog is 100%.

Group of orthologs #1127. Best score 112 bits
Score difference with first non-orthologous sequence - P.jiroveci:112 T.nigroviridis:112

L0PCY1              	100.00%		H3CJZ5              	100.00%
Bootstrap support for L0PCY1 as seed ortholog is 100%.
Bootstrap support for H3CJZ5 as seed ortholog is 100%.

Group of orthologs #1128. Best score 112 bits
Score difference with first non-orthologous sequence - P.jiroveci:112 T.nigroviridis:112

L0P8J6              	100.00%		H3D996              	100.00%
Bootstrap support for L0P8J6 as seed ortholog is 100%.
Bootstrap support for H3D996 as seed ortholog is 100%.

Group of orthologs #1129. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 T.nigroviridis:111

L0PFG4              	100.00%		H3CCG2              	100.00%
L0P939              	36.86%		
Bootstrap support for L0PFG4 as seed ortholog is 100%.
Bootstrap support for H3CCG2 as seed ortholog is 100%.

Group of orthologs #1130. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 T.nigroviridis:111

L0PF86              	100.00%		H3CNC0              	100.00%
L0PC10              	85.22%		
Bootstrap support for L0PF86 as seed ortholog is 100%.
Bootstrap support for H3CNC0 as seed ortholog is 100%.

Group of orthologs #1131. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 T.nigroviridis:39

L0PF36              	100.00%		H3D0T2              	100.00%
                    	       		H3CZG7              	28.77%
Bootstrap support for L0PF36 as seed ortholog is 100%.
Bootstrap support for H3D0T2 as seed ortholog is 83%.

Group of orthologs #1132. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 T.nigroviridis:24

L0PBU9              	100.00%		Q4SZQ5              	100.00%
                    	       		Q4SH08              	59.48%
Bootstrap support for L0PBU9 as seed ortholog is 100%.
Bootstrap support for Q4SZQ5 as seed ortholog is 94%.

Group of orthologs #1133. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 T.nigroviridis:111

L0PF37              	100.00%		H3BZR2              	100.00%
Bootstrap support for L0PF37 as seed ortholog is 100%.
Bootstrap support for H3BZR2 as seed ortholog is 100%.

Group of orthologs #1134. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 T.nigroviridis:111

L0PGR9              	100.00%		H3BZJ7              	100.00%
Bootstrap support for L0PGR9 as seed ortholog is 100%.
Bootstrap support for H3BZJ7 as seed ortholog is 100%.

Group of orthologs #1135. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 T.nigroviridis:111

L0P997              	100.00%		H3DMR9              	100.00%
Bootstrap support for L0P997 as seed ortholog is 100%.
Bootstrap support for H3DMR9 as seed ortholog is 100%.

Group of orthologs #1136. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 T.nigroviridis:111

L0PCP9              	100.00%		H3DIY7              	100.00%
Bootstrap support for L0PCP9 as seed ortholog is 100%.
Bootstrap support for H3DIY7 as seed ortholog is 100%.

Group of orthologs #1137. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 T.nigroviridis:111

L0PAK0              	100.00%		Q4S0Z2              	100.00%
Bootstrap support for L0PAK0 as seed ortholog is 100%.
Bootstrap support for Q4S0Z2 as seed ortholog is 100%.

Group of orthologs #1138. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 T.nigroviridis:111

L0PCZ2              	100.00%		Q4TBZ2              	100.00%
Bootstrap support for L0PCZ2 as seed ortholog is 100%.
Bootstrap support for Q4TBZ2 as seed ortholog is 100%.

Group of orthologs #1139. Best score 110 bits
Score difference with first non-orthologous sequence - P.jiroveci:110 T.nigroviridis:110

L0PE76              	100.00%		H3C5L9              	100.00%
Bootstrap support for L0PE76 as seed ortholog is 100%.
Bootstrap support for H3C5L9 as seed ortholog is 100%.

Group of orthologs #1140. Best score 110 bits
Score difference with first non-orthologous sequence - P.jiroveci:110 T.nigroviridis:110

L0P7D7              	100.00%		Q4RGT2              	100.00%
Bootstrap support for L0P7D7 as seed ortholog is 100%.
Bootstrap support for Q4RGT2 as seed ortholog is 100%.

Group of orthologs #1141. Best score 110 bits
Score difference with first non-orthologous sequence - P.jiroveci:110 T.nigroviridis:110

L0PFD0              	100.00%		H3DLS5              	100.00%
Bootstrap support for L0PFD0 as seed ortholog is 100%.
Bootstrap support for H3DLS5 as seed ortholog is 100%.

Group of orthologs #1142. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:47 T.nigroviridis:60

L0P982              	100.00%		H3D810              	100.00%
                    	       		H3CRS2              	62.47%
                    	       		H3CRS1              	52.78%
                    	       		H3D1C3              	44.54%
                    	       		H3DMU7              	38.97%
                    	       		H3D3W2              	32.99%
                    	       		H3D5K2              	32.78%
                    	       		H3CCX5              	31.75%
                    	       		H3CB88              	31.34%
                    	       		H3CZA6              	21.24%
                    	       		H3D3I3              	17.94%
                    	       		H3DDV7              	17.32%
                    	       		Q4RY88              	11.13%
                    	       		H3D9X9              	7.22%
Bootstrap support for L0P982 as seed ortholog is 93%.
Bootstrap support for H3D810 as seed ortholog is 99%.

Group of orthologs #1143. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 T.nigroviridis:19

L0P9S9              	100.00%		H3C7X7              	100.00%
L0PDT3              	45.09%		H3CJR0              	52.96%
                    	       		Q4T7D3              	44.25%
                    	       		H3DAV1              	42.57%
                    	       		H3BYP6              	42.57%
                    	       		H3DIY5              	28.04%
Bootstrap support for L0P9S9 as seed ortholog is 100%.
Bootstrap support for H3C7X7 as seed ortholog is 67%.
Alternative seed ortholog is H3CV83 (19 bits away from this cluster)

Group of orthologs #1144. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:33 T.nigroviridis:50

L0PBE1              	100.00%		H3DMZ5              	100.00%
                    	       		H3DMS2              	91.43%
                    	       		Q4RN14              	89.80%
                    	       		H3D1L1              	28.57%
                    	       		H3DES6              	28.57%
                    	       		H3C3Q0              	21.22%
Bootstrap support for L0PBE1 as seed ortholog is 92%.
Bootstrap support for H3DMZ5 as seed ortholog is 99%.

Group of orthologs #1145. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 T.nigroviridis:109

L0PF00              	100.00%		H3C2A6              	100.00%
Bootstrap support for L0PF00 as seed ortholog is 100%.
Bootstrap support for H3C2A6 as seed ortholog is 100%.

Group of orthologs #1146. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 T.nigroviridis:3

L0PGB9              	100.00%		H3C8S1              	100.00%
Bootstrap support for L0PGB9 as seed ortholog is 93%.
Bootstrap support for H3C8S1 as seed ortholog is 45%.
Alternative seed ortholog is H3CVZ2 (3 bits away from this cluster)

Group of orthologs #1147. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 T.nigroviridis:109

L0PCT2              	100.00%		H3CNR6              	100.00%
Bootstrap support for L0PCT2 as seed ortholog is 100%.
Bootstrap support for H3CNR6 as seed ortholog is 100%.

Group of orthologs #1148. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 T.nigroviridis:109

L0PD19              	100.00%		H3DDK3              	100.00%
Bootstrap support for L0PD19 as seed ortholog is 100%.
Bootstrap support for H3DDK3 as seed ortholog is 100%.

Group of orthologs #1149. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 T.nigroviridis:109

L0PEP9              	100.00%		Q4SAR3              	100.00%
Bootstrap support for L0PEP9 as seed ortholog is 100%.
Bootstrap support for Q4SAR3 as seed ortholog is 100%.

Group of orthologs #1150. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 T.nigroviridis:109

L0PGP3              	100.00%		Q4S618              	100.00%
Bootstrap support for L0PGP3 as seed ortholog is 100%.
Bootstrap support for Q4S618 as seed ortholog is 100%.

Group of orthologs #1151. Best score 108 bits
Score difference with first non-orthologous sequence - P.jiroveci:108 T.nigroviridis:108

L0PFV2              	100.00%		H3CR48              	100.00%
Bootstrap support for L0PFV2 as seed ortholog is 100%.
Bootstrap support for H3CR48 as seed ortholog is 100%.

Group of orthologs #1152. Best score 108 bits
Score difference with first non-orthologous sequence - P.jiroveci:108 T.nigroviridis:108

L0PB99              	100.00%		H3DAQ6              	100.00%
Bootstrap support for L0PB99 as seed ortholog is 100%.
Bootstrap support for H3DAQ6 as seed ortholog is 100%.

Group of orthologs #1153. Best score 108 bits
Score difference with first non-orthologous sequence - P.jiroveci:108 T.nigroviridis:43

L0PDI3              	100.00%		Q4RJS7              	100.00%
Bootstrap support for L0PDI3 as seed ortholog is 100%.
Bootstrap support for Q4RJS7 as seed ortholog is 87%.

Group of orthologs #1154. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:23 T.nigroviridis:107

L0PEV0              	100.00%		H3CAR8              	100.00%
Bootstrap support for L0PEV0 as seed ortholog is 79%.
Bootstrap support for H3CAR8 as seed ortholog is 100%.

Group of orthologs #1155. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 T.nigroviridis:107

L0P7T7              	100.00%		H3CLJ2              	100.00%
Bootstrap support for L0P7T7 as seed ortholog is 100%.
Bootstrap support for H3CLJ2 as seed ortholog is 100%.

Group of orthologs #1156. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 T.nigroviridis:107

L0PA59              	100.00%		H3DFJ2              	100.00%
Bootstrap support for L0PA59 as seed ortholog is 100%.
Bootstrap support for H3DFJ2 as seed ortholog is 100%.

Group of orthologs #1157. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 T.nigroviridis:64

L0PEE1              	100.00%		Q4RUP3              	100.00%
Bootstrap support for L0PEE1 as seed ortholog is 100%.
Bootstrap support for Q4RUP3 as seed ortholog is 99%.

Group of orthologs #1158. Best score 106 bits
Score difference with first non-orthologous sequence - P.jiroveci:106 T.nigroviridis:106

L0PBA3              	100.00%		H3CQE4              	100.00%
Bootstrap support for L0PBA3 as seed ortholog is 100%.
Bootstrap support for H3CQE4 as seed ortholog is 100%.

Group of orthologs #1159. Best score 106 bits
Score difference with first non-orthologous sequence - P.jiroveci:106 T.nigroviridis:106

L0PAK9              	100.00%		H3DPW0              	100.00%
Bootstrap support for L0PAK9 as seed ortholog is 100%.
Bootstrap support for H3DPW0 as seed ortholog is 100%.

Group of orthologs #1160. Best score 106 bits
Score difference with first non-orthologous sequence - P.jiroveci:106 T.nigroviridis:106

L0PFB0              	100.00%		H3DJY4              	100.00%
Bootstrap support for L0PFB0 as seed ortholog is 100%.
Bootstrap support for H3DJY4 as seed ortholog is 100%.

Group of orthologs #1161. Best score 106 bits
Score difference with first non-orthologous sequence - P.jiroveci:106 T.nigroviridis:26

L0PF58              	100.00%		Q4S3D0              	100.00%
Bootstrap support for L0PF58 as seed ortholog is 100%.
Bootstrap support for Q4S3D0 as seed ortholog is 84%.

Group of orthologs #1162. Best score 105 bits
Score difference with first non-orthologous sequence - P.jiroveci:105 T.nigroviridis:105

L0PBQ7              	100.00%		H3CQK1              	100.00%
                    	       		H3CLX8              	73.82%
                    	       		H3CC50              	50.94%
                    	       		H3CED6              	43.63%
                    	       		H3CXJ6              	29.01%
                    	       		H3CED1              	9.20%
Bootstrap support for L0PBQ7 as seed ortholog is 100%.
Bootstrap support for H3CQK1 as seed ortholog is 100%.

Group of orthologs #1163. Best score 105 bits
Score difference with first non-orthologous sequence - P.jiroveci:6 T.nigroviridis:105

L0PGP4              	100.00%		Q4RJL4              	100.00%
Bootstrap support for L0PGP4 as seed ortholog is 53%.
Alternative seed ortholog is L0P863 (6 bits away from this cluster)
Bootstrap support for Q4RJL4 as seed ortholog is 100%.

Group of orthologs #1164. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 T.nigroviridis:45

L0PBH0              	100.00%		H3CA60              	100.00%
L0PGS5              	47.79%		
Bootstrap support for L0PBH0 as seed ortholog is 100%.
Bootstrap support for H3CA60 as seed ortholog is 95%.

Group of orthologs #1165. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 T.nigroviridis:104

L0PGB6              	100.00%		H3CCN2              	100.00%
L0PG66              	85.76%		
Bootstrap support for L0PGB6 as seed ortholog is 100%.
Bootstrap support for H3CCN2 as seed ortholog is 100%.

Group of orthologs #1166. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 T.nigroviridis:104

L0P7Q2              	100.00%		H3DJJ0              	100.00%
                    	       		Q4RWZ8              	38.85%
Bootstrap support for L0P7Q2 as seed ortholog is 100%.
Bootstrap support for H3DJJ0 as seed ortholog is 100%.

Group of orthologs #1167. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 T.nigroviridis:104

L0PAM7              	100.00%		H3CD09              	100.00%
Bootstrap support for L0PAM7 as seed ortholog is 100%.
Bootstrap support for H3CD09 as seed ortholog is 100%.

Group of orthologs #1168. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 T.nigroviridis:104

L0PH76              	100.00%		H3CGZ6              	100.00%
Bootstrap support for L0PH76 as seed ortholog is 100%.
Bootstrap support for H3CGZ6 as seed ortholog is 100%.

Group of orthologs #1169. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 T.nigroviridis:104

L0P816              	100.00%		H3DHH1              	100.00%
Bootstrap support for L0P816 as seed ortholog is 100%.
Bootstrap support for H3DHH1 as seed ortholog is 100%.

Group of orthologs #1170. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 T.nigroviridis:104

L0P9E6              	100.00%		H3DIA9              	100.00%
Bootstrap support for L0P9E6 as seed ortholog is 100%.
Bootstrap support for H3DIA9 as seed ortholog is 100%.

Group of orthologs #1171. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 T.nigroviridis:104

L0P9R5              	100.00%		Q4S925              	100.00%
Bootstrap support for L0P9R5 as seed ortholog is 100%.
Bootstrap support for Q4S925 as seed ortholog is 100%.

Group of orthologs #1172. Best score 103 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 T.nigroviridis:103

L0PHJ8              	100.00%		H3DFF8              	100.00%
L0P888              	60.03%		
Bootstrap support for L0PHJ8 as seed ortholog is 100%.
Bootstrap support for H3DFF8 as seed ortholog is 100%.

Group of orthologs #1173. Best score 103 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 T.nigroviridis:103

L0PCZ0              	100.00%		H3CF12              	100.00%
Bootstrap support for L0PCZ0 as seed ortholog is 100%.
Bootstrap support for H3CF12 as seed ortholog is 100%.

Group of orthologs #1174. Best score 103 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 T.nigroviridis:103

L0PFT4              	100.00%		H3CQ88              	100.00%
Bootstrap support for L0PFT4 as seed ortholog is 100%.
Bootstrap support for H3CQ88 as seed ortholog is 100%.

Group of orthologs #1175. Best score 103 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 T.nigroviridis:103

L0PFG8              	100.00%		H3CXX5              	100.00%
Bootstrap support for L0PFG8 as seed ortholog is 100%.
Bootstrap support for H3CXX5 as seed ortholog is 100%.

Group of orthologs #1176. Best score 103 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 T.nigroviridis:103

L0PAS5              	100.00%		H3DAG9              	100.00%
Bootstrap support for L0PAS5 as seed ortholog is 100%.
Bootstrap support for H3DAG9 as seed ortholog is 100%.

Group of orthologs #1177. Best score 103 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 T.nigroviridis:32

L0PDF0              	100.00%		H3D7M4              	100.00%
Bootstrap support for L0PDF0 as seed ortholog is 100%.
Bootstrap support for H3D7M4 as seed ortholog is 86%.

Group of orthologs #1178. Best score 103 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 T.nigroviridis:103

L0P9Z6              	100.00%		Q4SQY6              	100.00%
Bootstrap support for L0P9Z6 as seed ortholog is 100%.
Bootstrap support for Q4SQY6 as seed ortholog is 100%.

Group of orthologs #1179. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:102 T.nigroviridis:102

L0P8A1              	100.00%		H3CH34              	100.00%
Bootstrap support for L0P8A1 as seed ortholog is 100%.
Bootstrap support for H3CH34 as seed ortholog is 100%.

Group of orthologs #1180. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:102 T.nigroviridis:24

L0PBX5              	100.00%		H3CWK6              	100.00%
Bootstrap support for L0PBX5 as seed ortholog is 100%.
Bootstrap support for H3CWK6 as seed ortholog is 98%.

Group of orthologs #1181. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:102 T.nigroviridis:102

L0PCG6              	100.00%		Q4SLE5              	100.00%
Bootstrap support for L0PCG6 as seed ortholog is 100%.
Bootstrap support for Q4SLE5 as seed ortholog is 100%.

Group of orthologs #1182. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:102 T.nigroviridis:102

L0PH80              	100.00%		H3DPV6              	100.00%
Bootstrap support for L0PH80 as seed ortholog is 100%.
Bootstrap support for H3DPV6 as seed ortholog is 100%.

Group of orthologs #1183. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 T.nigroviridis:101

L0PD09              	100.00%		H3D5Q1              	100.00%
                    	       		H3DHA3              	100.00%
                    	       		H3CEM3              	17.09%
                    	       		H3D909              	14.48%
                    	       		H3D2R0              	12.90%
                    	       		H3CN77              	12.29%
                    	       		H3D0N0              	12.17%
                    	       		H3C957              	11.80%
                    	       		H3CKI0              	11.80%
                    	       		H3CXR5              	11.56%
                    	       		H3CYE7              	11.44%
                    	       		H3D4T7              	11.31%
                    	       		H3DI14              	6.20%
Bootstrap support for L0PD09 as seed ortholog is 100%.
Bootstrap support for H3D5Q1 as seed ortholog is 100%.
Bootstrap support for H3DHA3 as seed ortholog is 100%.

Group of orthologs #1184. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 T.nigroviridis:30

L0P9W5              	100.00%		H3C598              	100.00%
Bootstrap support for L0P9W5 as seed ortholog is 100%.
Bootstrap support for H3C598 as seed ortholog is 72%.
Alternative seed ortholog is H3CM44 (30 bits away from this cluster)

Group of orthologs #1185. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 T.nigroviridis:101

L0PE27              	100.00%		H3CM33              	100.00%
Bootstrap support for L0PE27 as seed ortholog is 100%.
Bootstrap support for H3CM33 as seed ortholog is 100%.

Group of orthologs #1186. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 T.nigroviridis:101

L0PE40              	100.00%		H3DBS8              	100.00%
Bootstrap support for L0PE40 as seed ortholog is 100%.
Bootstrap support for H3DBS8 as seed ortholog is 100%.

Group of orthologs #1187. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 T.nigroviridis:8

L0P903              	100.00%		Q4RIV5              	100.00%
Bootstrap support for L0P903 as seed ortholog is 100%.
Bootstrap support for Q4RIV5 as seed ortholog is 60%.
Alternative seed ortholog is Q4S4T0 (8 bits away from this cluster)

Group of orthologs #1188. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 T.nigroviridis:101

L0PD86              	100.00%		Q4SEC8              	100.00%
Bootstrap support for L0PD86 as seed ortholog is 100%.
Bootstrap support for Q4SEC8 as seed ortholog is 100%.

Group of orthologs #1189. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 T.nigroviridis:101

L0PD15              	100.00%		Q4TDY9              	100.00%
Bootstrap support for L0PD15 as seed ortholog is 100%.
Bootstrap support for Q4TDY9 as seed ortholog is 100%.

Group of orthologs #1190. Best score 100 bits
Score difference with first non-orthologous sequence - P.jiroveci:100 T.nigroviridis:100

L0PBD3              	100.00%		H3CU73              	100.00%
                    	       		H3CRV3              	52.33%
Bootstrap support for L0PBD3 as seed ortholog is 100%.
Bootstrap support for H3CU73 as seed ortholog is 100%.

Group of orthologs #1191. Best score 100 bits
Score difference with first non-orthologous sequence - P.jiroveci:100 T.nigroviridis:100

L0PHI8              	100.00%		H3BX33              	100.00%
Bootstrap support for L0PHI8 as seed ortholog is 100%.
Bootstrap support for H3BX33 as seed ortholog is 100%.

Group of orthologs #1192. Best score 100 bits
Score difference with first non-orthologous sequence - P.jiroveci:100 T.nigroviridis:100

L0P8G4              	100.00%		Q4SBM8              	100.00%
Bootstrap support for L0P8G4 as seed ortholog is 100%.
Bootstrap support for Q4SBM8 as seed ortholog is 100%.

Group of orthologs #1193. Best score 100 bits
Score difference with first non-orthologous sequence - P.jiroveci:100 T.nigroviridis:100

L0PFT5              	100.00%		H3DJM5              	100.00%
Bootstrap support for L0PFT5 as seed ortholog is 100%.
Bootstrap support for H3DJM5 as seed ortholog is 100%.

Group of orthologs #1194. Best score 100 bits
Score difference with first non-orthologous sequence - P.jiroveci:100 T.nigroviridis:100

L0PCQ4              	100.00%		Q4RGD3              	100.00%
Bootstrap support for L0PCQ4 as seed ortholog is 100%.
Bootstrap support for Q4RGD3 as seed ortholog is 100%.

Group of orthologs #1195. Best score 100 bits
Score difference with first non-orthologous sequence - P.jiroveci:100 T.nigroviridis:100

L0PD96              	100.00%		Q4SGV0              	100.00%
Bootstrap support for L0PD96 as seed ortholog is 100%.
Bootstrap support for Q4SGV0 as seed ortholog is 100%.

Group of orthologs #1196. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 T.nigroviridis:99

L0P7W8              	100.00%		H3D4W0              	100.00%
L0P8R2              	100.00%		
Bootstrap support for L0P7W8 as seed ortholog is 100%.
Bootstrap support for L0P8R2 as seed ortholog is 100%.
Bootstrap support for H3D4W0 as seed ortholog is 100%.

Group of orthologs #1197. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 T.nigroviridis:22

L0P8J9              	100.00%		H3D6R3              	100.00%
                    	       		H3CG47              	28.26%
Bootstrap support for L0P8J9 as seed ortholog is 100%.
Bootstrap support for H3D6R3 as seed ortholog is 69%.
Alternative seed ortholog is H3CP68 (22 bits away from this cluster)

Group of orthologs #1198. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 T.nigroviridis:99

L0PHU9              	100.00%		H3CUR4              	100.00%
Bootstrap support for L0PHU9 as seed ortholog is 100%.
Bootstrap support for H3CUR4 as seed ortholog is 100%.

Group of orthologs #1199. Best score 98 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 T.nigroviridis:11

L0PAF2              	100.00%		H3DGZ2              	100.00%
                    	       		H3DJZ5              	10.23%
                    	       		H3C4Z6              	8.71%
Bootstrap support for L0PAF2 as seed ortholog is 100%.
Bootstrap support for H3DGZ2 as seed ortholog is 70%.
Alternative seed ortholog is H3DE73 (11 bits away from this cluster)

Group of orthologs #1200. Best score 98 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 T.nigroviridis:98

L0PFK4              	100.00%		H3CYI9              	100.00%
Bootstrap support for L0PFK4 as seed ortholog is 100%.
Bootstrap support for H3CYI9 as seed ortholog is 100%.

Group of orthologs #1201. Best score 98 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 T.nigroviridis:98

L0PFI7              	100.00%		H3DB63              	100.00%
Bootstrap support for L0PFI7 as seed ortholog is 100%.
Bootstrap support for H3DB63 as seed ortholog is 100%.

Group of orthologs #1202. Best score 98 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 T.nigroviridis:98

L0PCQ5              	100.00%		Q4T891              	100.00%
Bootstrap support for L0PCQ5 as seed ortholog is 100%.
Bootstrap support for Q4T891 as seed ortholog is 100%.

Group of orthologs #1203. Best score 98 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 T.nigroviridis:98

L0PEX4              	100.00%		Q4SEE6              	100.00%
Bootstrap support for L0PEX4 as seed ortholog is 100%.
Bootstrap support for Q4SEE6 as seed ortholog is 100%.

Group of orthologs #1204. Best score 98 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 T.nigroviridis:48

L0PE32              	100.00%		Q4T029              	100.00%
Bootstrap support for L0PE32 as seed ortholog is 100%.
Bootstrap support for Q4T029 as seed ortholog is 99%.

Group of orthologs #1205. Best score 97 bits
Score difference with first non-orthologous sequence - P.jiroveci:97 T.nigroviridis:97

L0PD56              	100.00%		Q4REF8              	100.00%
                    	       		H3D765              	26.95%
Bootstrap support for L0PD56 as seed ortholog is 100%.
Bootstrap support for Q4REF8 as seed ortholog is 100%.

Group of orthologs #1206. Best score 97 bits
Score difference with first non-orthologous sequence - P.jiroveci:97 T.nigroviridis:97

L0P8Q1              	100.00%		H3BX47              	100.00%
Bootstrap support for L0P8Q1 as seed ortholog is 100%.
Bootstrap support for H3BX47 as seed ortholog is 100%.

Group of orthologs #1207. Best score 97 bits
Score difference with first non-orthologous sequence - P.jiroveci:97 T.nigroviridis:97

L0PDM8              	100.00%		H3CBP7              	100.00%
Bootstrap support for L0PDM8 as seed ortholog is 100%.
Bootstrap support for H3CBP7 as seed ortholog is 100%.

Group of orthologs #1208. Best score 97 bits
Score difference with first non-orthologous sequence - P.jiroveci:97 T.nigroviridis:45

L0PFA1              	100.00%		H3D557              	100.00%
Bootstrap support for L0PFA1 as seed ortholog is 100%.
Bootstrap support for H3D557 as seed ortholog is 99%.

Group of orthologs #1209. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 T.nigroviridis:96

L0PEK0              	100.00%		H3CQB8              	100.00%
                    	       		Q4S6E6              	38.89%
Bootstrap support for L0PEK0 as seed ortholog is 100%.
Bootstrap support for H3CQB8 as seed ortholog is 100%.

Group of orthologs #1210. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 T.nigroviridis:96

L0PG18              	100.00%		H3DHU7              	100.00%
                    	       		H3D372              	56.02%
Bootstrap support for L0PG18 as seed ortholog is 100%.
Bootstrap support for H3DHU7 as seed ortholog is 100%.

Group of orthologs #1211. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:41 T.nigroviridis:96

L0PD23              	100.00%		H3C4Q2              	100.00%
Bootstrap support for L0PD23 as seed ortholog is 96%.
Bootstrap support for H3C4Q2 as seed ortholog is 100%.

Group of orthologs #1212. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 T.nigroviridis:96

L0PE35              	100.00%		H3CLN9              	100.00%
Bootstrap support for L0PE35 as seed ortholog is 100%.
Bootstrap support for H3CLN9 as seed ortholog is 100%.

Group of orthologs #1213. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 T.nigroviridis:96

L0PFQ6              	100.00%		H3D7E8              	100.00%
Bootstrap support for L0PFQ6 as seed ortholog is 100%.
Bootstrap support for H3D7E8 as seed ortholog is 100%.

Group of orthologs #1214. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:47 T.nigroviridis:19

L0PCM4              	100.00%		H3DIK3              	100.00%
Bootstrap support for L0PCM4 as seed ortholog is 93%.
Bootstrap support for H3DIK3 as seed ortholog is 81%.

Group of orthologs #1215. Best score 95 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 T.nigroviridis:95

L0PF90              	100.00%		H3CG45              	100.00%
                    	       		H3DPM5              	51.09%
                    	       		H3CID8              	42.71%
Bootstrap support for L0PF90 as seed ortholog is 100%.
Bootstrap support for H3CG45 as seed ortholog is 100%.

Group of orthologs #1216. Best score 95 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 T.nigroviridis:95

L0P7Y1              	100.00%		H3DIT2              	100.00%
Bootstrap support for L0P7Y1 as seed ortholog is 100%.
Bootstrap support for H3DIT2 as seed ortholog is 100%.

Group of orthologs #1217. Best score 95 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 T.nigroviridis:95

L0PFX6              	100.00%		H3DH43              	100.00%
Bootstrap support for L0PFX6 as seed ortholog is 100%.
Bootstrap support for H3DH43 as seed ortholog is 100%.

Group of orthologs #1218. Best score 95 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 T.nigroviridis:95

L0PFC4              	100.00%		Q4RP99              	100.00%
Bootstrap support for L0PFC4 as seed ortholog is 100%.
Bootstrap support for Q4RP99 as seed ortholog is 100%.

Group of orthologs #1219. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 T.nigroviridis:94

L0P8Y9              	100.00%		H3D384              	100.00%
                    	       		H3DBL6              	40.46%
Bootstrap support for L0P8Y9 as seed ortholog is 100%.
Bootstrap support for H3D384 as seed ortholog is 100%.

Group of orthologs #1220. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 T.nigroviridis:94

L0PC19              	100.00%		H3DE96              	100.00%
                    	       		H3DBX9              	28.57%
Bootstrap support for L0PC19 as seed ortholog is 100%.
Bootstrap support for H3DE96 as seed ortholog is 100%.

Group of orthologs #1221. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 T.nigroviridis:94

L0PE10              	100.00%		H3BVV1              	100.00%
Bootstrap support for L0PE10 as seed ortholog is 100%.
Bootstrap support for H3BVV1 as seed ortholog is 100%.

Group of orthologs #1222. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 T.nigroviridis:94

L0P8Z4              	100.00%		H3CEZ5              	100.00%
Bootstrap support for L0P8Z4 as seed ortholog is 100%.
Bootstrap support for H3CEZ5 as seed ortholog is 100%.

Group of orthologs #1223. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 T.nigroviridis:94

L0PAV4              	100.00%		H3CDG2              	100.00%
Bootstrap support for L0PAV4 as seed ortholog is 100%.
Bootstrap support for H3CDG2 as seed ortholog is 100%.

Group of orthologs #1224. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 T.nigroviridis:94

L0PFT3              	100.00%		H3D7L4              	100.00%
Bootstrap support for L0PFT3 as seed ortholog is 100%.
Bootstrap support for H3D7L4 as seed ortholog is 100%.

Group of orthologs #1225. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 T.nigroviridis:94

L0PF89              	100.00%		H3DGR1              	100.00%
Bootstrap support for L0PF89 as seed ortholog is 100%.
Bootstrap support for H3DGR1 as seed ortholog is 100%.

Group of orthologs #1226. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 T.nigroviridis:94

L0PB93              	100.00%		H3DPA7              	100.00%
Bootstrap support for L0PB93 as seed ortholog is 100%.
Bootstrap support for H3DPA7 as seed ortholog is 100%.

Group of orthologs #1227. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 T.nigroviridis:94

L0PBK9              	100.00%		Q4T3W7              	100.00%
Bootstrap support for L0PBK9 as seed ortholog is 100%.
Bootstrap support for Q4T3W7 as seed ortholog is 100%.

Group of orthologs #1228. Best score 93 bits
Score difference with first non-orthologous sequence - P.jiroveci:93 T.nigroviridis:93

L0PC01              	100.00%		H3DB85              	100.00%
                    	       		H3DC22              	18.23%
                    	       		H3DB92              	6.04%
Bootstrap support for L0PC01 as seed ortholog is 100%.
Bootstrap support for H3DB85 as seed ortholog is 100%.

Group of orthologs #1229. Best score 93 bits
Score difference with first non-orthologous sequence - P.jiroveci:93 T.nigroviridis:6

L0PB42              	100.00%		H3DIK7              	100.00%
                    	       		H3DGD4              	88.35%
                    	       		H3D308              	67.96%
Bootstrap support for L0PB42 as seed ortholog is 100%.
Bootstrap support for H3DIK7 as seed ortholog is 67%.
Alternative seed ortholog is H3CC13 (6 bits away from this cluster)

Group of orthologs #1230. Best score 93 bits
Score difference with first non-orthologous sequence - P.jiroveci:24 T.nigroviridis:93

L0PD30              	100.00%		H3D3K7              	100.00%
Bootstrap support for L0PD30 as seed ortholog is 80%.
Bootstrap support for H3D3K7 as seed ortholog is 100%.

Group of orthologs #1231. Best score 93 bits
Score difference with first non-orthologous sequence - P.jiroveci:93 T.nigroviridis:93

L0PBC9              	100.00%		H3D730              	100.00%
Bootstrap support for L0PBC9 as seed ortholog is 100%.
Bootstrap support for H3D730 as seed ortholog is 100%.

Group of orthologs #1232. Best score 93 bits
Score difference with first non-orthologous sequence - P.jiroveci:93 T.nigroviridis:93

L0P9F1              	100.00%		Q4SRW2              	100.00%
Bootstrap support for L0P9F1 as seed ortholog is 100%.
Bootstrap support for Q4SRW2 as seed ortholog is 100%.

Group of orthologs #1233. Best score 93 bits
Score difference with first non-orthologous sequence - P.jiroveci:93 T.nigroviridis:93

L0PF82              	100.00%		Q4TC39              	100.00%
Bootstrap support for L0PF82 as seed ortholog is 100%.
Bootstrap support for Q4TC39 as seed ortholog is 100%.

Group of orthologs #1234. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 T.nigroviridis:92

L0PCF7              	100.00%		H3D1A6              	100.00%
Bootstrap support for L0PCF7 as seed ortholog is 100%.
Bootstrap support for H3D1A6 as seed ortholog is 100%.

Group of orthologs #1235. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 T.nigroviridis:92

L0PCX7              	100.00%		H3DCQ5              	100.00%
Bootstrap support for L0PCX7 as seed ortholog is 100%.
Bootstrap support for H3DCQ5 as seed ortholog is 100%.

Group of orthologs #1236. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 T.nigroviridis:92

L0PD45              	100.00%		Q4SSY8              	100.00%
Bootstrap support for L0PD45 as seed ortholog is 100%.
Bootstrap support for Q4SSY8 as seed ortholog is 100%.

Group of orthologs #1237. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 T.nigroviridis:91

L0P995              	100.00%		H3C1K6              	100.00%
Bootstrap support for L0P995 as seed ortholog is 100%.
Bootstrap support for H3C1K6 as seed ortholog is 100%.

Group of orthologs #1238. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 T.nigroviridis:91

L0PFM0              	100.00%		H3CBU4              	100.00%
Bootstrap support for L0PFM0 as seed ortholog is 100%.
Bootstrap support for H3CBU4 as seed ortholog is 100%.

Group of orthologs #1239. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 T.nigroviridis:91

L0PGF4              	100.00%		H3CYD8              	100.00%
Bootstrap support for L0PGF4 as seed ortholog is 100%.
Bootstrap support for H3CYD8 as seed ortholog is 100%.

Group of orthologs #1240. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 T.nigroviridis:91

L0PG13              	100.00%		H3D0V6              	100.00%
Bootstrap support for L0PG13 as seed ortholog is 100%.
Bootstrap support for H3D0V6 as seed ortholog is 100%.

Group of orthologs #1241. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 T.nigroviridis:91

L0PAK5              	100.00%		H3DGT5              	100.00%
Bootstrap support for L0PAK5 as seed ortholog is 100%.
Bootstrap support for H3DGT5 as seed ortholog is 100%.

Group of orthologs #1242. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 T.nigroviridis:91

L0P9T3              	100.00%		Q4T248              	100.00%
Bootstrap support for L0P9T3 as seed ortholog is 100%.
Bootstrap support for Q4T248 as seed ortholog is 100%.

Group of orthologs #1243. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 T.nigroviridis:91

L0PCZ5              	100.00%		Q4RP86              	100.00%
Bootstrap support for L0PCZ5 as seed ortholog is 100%.
Bootstrap support for Q4RP86 as seed ortholog is 100%.

Group of orthologs #1244. Best score 90 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 T.nigroviridis:90

L0PFK1              	100.00%		H3CDR8              	100.00%
Bootstrap support for L0PFK1 as seed ortholog is 100%.
Bootstrap support for H3CDR8 as seed ortholog is 100%.

Group of orthologs #1245. Best score 90 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 T.nigroviridis:90

L0PH07              	100.00%		H3CGA7              	100.00%
Bootstrap support for L0PH07 as seed ortholog is 100%.
Bootstrap support for H3CGA7 as seed ortholog is 100%.

Group of orthologs #1246. Best score 90 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 T.nigroviridis:31

L0PDW2              	100.00%		H3DN27              	100.00%
Bootstrap support for L0PDW2 as seed ortholog is 100%.
Bootstrap support for H3DN27 as seed ortholog is 79%.

Group of orthologs #1247. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 T.nigroviridis:89

L0PD39              	100.00%		H3CUV6              	100.00%
                    	       		H3CG60              	40.43%
Bootstrap support for L0PD39 as seed ortholog is 100%.
Bootstrap support for H3CUV6 as seed ortholog is 100%.

Group of orthologs #1248. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 T.nigroviridis:15

L0PAT3              	100.00%		H3CAD3              	100.00%
Bootstrap support for L0PAT3 as seed ortholog is 100%.
Bootstrap support for H3CAD3 as seed ortholog is 85%.

Group of orthologs #1249. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 T.nigroviridis:89

L0PAW5              	100.00%		H3CC76              	100.00%
Bootstrap support for L0PAW5 as seed ortholog is 100%.
Bootstrap support for H3CC76 as seed ortholog is 100%.

Group of orthologs #1250. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 T.nigroviridis:89

L0P9H0              	100.00%		H3CUW7              	100.00%
Bootstrap support for L0P9H0 as seed ortholog is 100%.
Bootstrap support for H3CUW7 as seed ortholog is 100%.

Group of orthologs #1251. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 T.nigroviridis:89

L0P9D5              	100.00%		H3D4A7              	100.00%
Bootstrap support for L0P9D5 as seed ortholog is 100%.
Bootstrap support for H3D4A7 as seed ortholog is 100%.

Group of orthologs #1252. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 T.nigroviridis:89

L0PBX3              	100.00%		H3D2A2              	100.00%
Bootstrap support for L0PBX3 as seed ortholog is 100%.
Bootstrap support for H3D2A2 as seed ortholog is 100%.

Group of orthologs #1253. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 T.nigroviridis:89

L0PBZ3              	100.00%		H3DJ43              	100.00%
Bootstrap support for L0PBZ3 as seed ortholog is 100%.
Bootstrap support for H3DJ43 as seed ortholog is 100%.

Group of orthologs #1254. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 T.nigroviridis:89

L0PCP2              	100.00%		H3DIC2              	100.00%
Bootstrap support for L0PCP2 as seed ortholog is 100%.
Bootstrap support for H3DIC2 as seed ortholog is 100%.

Group of orthologs #1255. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 T.nigroviridis:89

L0PEF7              	100.00%		H3DR47              	100.00%
Bootstrap support for L0PEF7 as seed ortholog is 100%.
Bootstrap support for H3DR47 as seed ortholog is 100%.

Group of orthologs #1256. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 T.nigroviridis:23

L0PEF8              	100.00%		Q4S2E2              	100.00%
Bootstrap support for L0PEF8 as seed ortholog is 100%.
Bootstrap support for Q4S2E2 as seed ortholog is 78%.

Group of orthologs #1257. Best score 88 bits
Score difference with first non-orthologous sequence - P.jiroveci:88 T.nigroviridis:88

L0PGZ1              	100.00%		H3CF47              	100.00%
L0PGM3              	87.02%		
Bootstrap support for L0PGZ1 as seed ortholog is 100%.
Bootstrap support for H3CF47 as seed ortholog is 100%.

Group of orthologs #1258. Best score 88 bits
Score difference with first non-orthologous sequence - P.jiroveci:88 T.nigroviridis:88

L0PEA3              	100.00%		H3D7C8              	100.00%
Bootstrap support for L0PEA3 as seed ortholog is 100%.
Bootstrap support for H3D7C8 as seed ortholog is 100%.

Group of orthologs #1259. Best score 88 bits
Score difference with first non-orthologous sequence - P.jiroveci:88 T.nigroviridis:11

L0PDN5              	100.00%		H3DJ03              	100.00%
Bootstrap support for L0PDN5 as seed ortholog is 100%.
Bootstrap support for H3DJ03 as seed ortholog is 48%.
Alternative seed ortholog is Q4RQV3 (11 bits away from this cluster)

Group of orthologs #1260. Best score 88 bits
Score difference with first non-orthologous sequence - P.jiroveci:88 T.nigroviridis:88

L0P6Y8              	100.00%		Q4T4P1              	100.00%
Bootstrap support for L0P6Y8 as seed ortholog is 100%.
Bootstrap support for Q4T4P1 as seed ortholog is 100%.

Group of orthologs #1261. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 T.nigroviridis:87

L0P7T1              	100.00%		H3CG21              	100.00%
                    	       		H3CSF7              	13.29%
Bootstrap support for L0P7T1 as seed ortholog is 100%.
Bootstrap support for H3CG21 as seed ortholog is 100%.

Group of orthologs #1262. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 T.nigroviridis:87

L0PCM3              	100.00%		H3BXK0              	100.00%
Bootstrap support for L0PCM3 as seed ortholog is 100%.
Bootstrap support for H3BXK0 as seed ortholog is 100%.

Group of orthologs #1263. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 T.nigroviridis:87

L0PDC5              	100.00%		H3CA08              	100.00%
Bootstrap support for L0PDC5 as seed ortholog is 100%.
Bootstrap support for H3CA08 as seed ortholog is 100%.

Group of orthologs #1264. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 T.nigroviridis:87

L0P868              	100.00%		H3CLB0              	100.00%
Bootstrap support for L0P868 as seed ortholog is 100%.
Bootstrap support for H3CLB0 as seed ortholog is 100%.

Group of orthologs #1265. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 T.nigroviridis:87

L0P9G4              	100.00%		H3DHB3              	100.00%
Bootstrap support for L0P9G4 as seed ortholog is 100%.
Bootstrap support for H3DHB3 as seed ortholog is 100%.

Group of orthologs #1266. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 T.nigroviridis:86

L0P9W7              	100.00%		Q4S0R6              	100.00%
                    	       		H3D8L7              	23.36%
Bootstrap support for L0P9W7 as seed ortholog is 100%.
Bootstrap support for Q4S0R6 as seed ortholog is 100%.

Group of orthologs #1267. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 T.nigroviridis:86

L0PG49              	100.00%		Q4T5L9              	100.00%
L0PEF9              	84.91%		
Bootstrap support for L0PG49 as seed ortholog is 100%.
Bootstrap support for Q4T5L9 as seed ortholog is 100%.

Group of orthologs #1268. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 T.nigroviridis:86

L0PCF2              	100.00%		H3C9Q8              	100.00%
Bootstrap support for L0PCF2 as seed ortholog is 100%.
Bootstrap support for H3C9Q8 as seed ortholog is 100%.

Group of orthologs #1269. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 T.nigroviridis:86

L0PF35              	100.00%		H3CCI3              	100.00%
Bootstrap support for L0PF35 as seed ortholog is 100%.
Bootstrap support for H3CCI3 as seed ortholog is 100%.

Group of orthologs #1270. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 T.nigroviridis:86

L0PFA2              	100.00%		H3CHB4              	100.00%
Bootstrap support for L0PFA2 as seed ortholog is 100%.
Bootstrap support for H3CHB4 as seed ortholog is 100%.

Group of orthologs #1271. Best score 85 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 T.nigroviridis:85

L0P8U3              	100.00%		H3DPH7              	100.00%
                    	       		H3DJJ3              	45.32%
                    	       		H3DKL1              	33.19%
                    	       		H3DMY5              	28.65%
Bootstrap support for L0P8U3 as seed ortholog is 100%.
Bootstrap support for H3DPH7 as seed ortholog is 100%.

Group of orthologs #1272. Best score 85 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 T.nigroviridis:11

L0PAD6              	100.00%		H3CL01              	100.00%
                    	       		H3DD85              	29.54%
Bootstrap support for L0PAD6 as seed ortholog is 100%.
Bootstrap support for H3CL01 as seed ortholog is 64%.
Alternative seed ortholog is H3C223 (11 bits away from this cluster)

Group of orthologs #1273. Best score 85 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 T.nigroviridis:14

L0PCN8              	100.00%		H3D0H7              	100.00%
Bootstrap support for L0PCN8 as seed ortholog is 100%.
Bootstrap support for H3D0H7 as seed ortholog is 63%.
Alternative seed ortholog is Q4S6T9 (14 bits away from this cluster)

Group of orthologs #1274. Best score 85 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 T.nigroviridis:85

L0PFH8              	100.00%		Q4RLW0              	100.00%
Bootstrap support for L0PFH8 as seed ortholog is 100%.
Bootstrap support for Q4RLW0 as seed ortholog is 100%.

Group of orthologs #1275. Best score 85 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 T.nigroviridis:85

L0PFF8              	100.00%		Q4RPF9              	100.00%
Bootstrap support for L0PFF8 as seed ortholog is 100%.
Bootstrap support for Q4RPF9 as seed ortholog is 100%.

Group of orthologs #1276. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 T.nigroviridis:84

L0PAZ6              	100.00%		H3BXG8              	100.00%
                    	       		H3DGT7              	51.05%
                    	       		H3DFV1              	40.25%
                    	       		H3CDB7              	23.93%
Bootstrap support for L0PAZ6 as seed ortholog is 100%.
Bootstrap support for H3BXG8 as seed ortholog is 100%.

Group of orthologs #1277. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 T.nigroviridis:84

L0PE88              	100.00%		H3DIL6              	100.00%
                    	       		H3DIG8              	61.54%
                    	       		H3CG57              	41.32%
                    	       		H3DHG9              	39.36%
Bootstrap support for L0PE88 as seed ortholog is 100%.
Bootstrap support for H3DIL6 as seed ortholog is 100%.

Group of orthologs #1278. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 T.nigroviridis:32

L0PG69              	100.00%		H3DD29              	100.00%
                    	       		H3D7Q5              	65.03%
                    	       		H3CM51              	11.57%
Bootstrap support for L0PG69 as seed ortholog is 100%.
Bootstrap support for H3DD29 as seed ortholog is 85%.

Group of orthologs #1279. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 T.nigroviridis:84

L0PI42              	100.00%		H3CUA8              	100.00%
                    	       		H3DL09              	43.93%
Bootstrap support for L0PI42 as seed ortholog is 100%.
Bootstrap support for H3CUA8 as seed ortholog is 100%.

Group of orthologs #1280. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 T.nigroviridis:84

L0PFQ3              	100.00%		H3BWN6              	100.00%
Bootstrap support for L0PFQ3 as seed ortholog is 100%.
Bootstrap support for H3BWN6 as seed ortholog is 100%.

Group of orthologs #1281. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 T.nigroviridis:84

L0P724              	100.00%		H3CRY7              	100.00%
Bootstrap support for L0P724 as seed ortholog is 100%.
Bootstrap support for H3CRY7 as seed ortholog is 100%.

Group of orthologs #1282. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 T.nigroviridis:84

L0PCX6              	100.00%		H3CV33              	100.00%
Bootstrap support for L0PCX6 as seed ortholog is 100%.
Bootstrap support for H3CV33 as seed ortholog is 100%.

Group of orthologs #1283. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 T.nigroviridis:84

L0P9D9              	100.00%		H3D662              	100.00%
Bootstrap support for L0P9D9 as seed ortholog is 100%.
Bootstrap support for H3D662 as seed ortholog is 100%.

Group of orthologs #1284. Best score 83 bits
Score difference with first non-orthologous sequence - P.jiroveci:83 T.nigroviridis:9

L0P8W8              	100.00%		Q4RAG7              	100.00%
L0P9K5              	56.70%		
Bootstrap support for L0P8W8 as seed ortholog is 100%.
Bootstrap support for Q4RAG7 as seed ortholog is 62%.
Alternative seed ortholog is H3DPU5 (9 bits away from this cluster)

Group of orthologs #1285. Best score 83 bits
Score difference with first non-orthologous sequence - P.jiroveci:83 T.nigroviridis:83

L0P883              	100.00%		H3D0V9              	100.00%
Bootstrap support for L0P883 as seed ortholog is 100%.
Bootstrap support for H3D0V9 as seed ortholog is 100%.

Group of orthologs #1286. Best score 83 bits
Score difference with first non-orthologous sequence - P.jiroveci:83 T.nigroviridis:83

L0PAP8              	100.00%		H3D296              	100.00%
Bootstrap support for L0PAP8 as seed ortholog is 100%.
Bootstrap support for H3D296 as seed ortholog is 100%.

Group of orthologs #1287. Best score 83 bits
Score difference with first non-orthologous sequence - P.jiroveci:83 T.nigroviridis:83

L0PFL2              	100.00%		Q4SIZ7              	100.00%
Bootstrap support for L0PFL2 as seed ortholog is 100%.
Bootstrap support for Q4SIZ7 as seed ortholog is 100%.

Group of orthologs #1288. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 T.nigroviridis:82

L0PHH5              	100.00%		H3CJU0              	100.00%
                    	       		H3CVD0              	40.30%
Bootstrap support for L0PHH5 as seed ortholog is 100%.
Bootstrap support for H3CJU0 as seed ortholog is 100%.

Group of orthologs #1289. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 T.nigroviridis:82

L0PCC2              	100.00%		H3CWE9              	100.00%
Bootstrap support for L0PCC2 as seed ortholog is 100%.
Bootstrap support for H3CWE9 as seed ortholog is 100%.

Group of orthologs #1290. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 T.nigroviridis:82

L0PFM9              	100.00%		H3DP04              	100.00%
Bootstrap support for L0PFM9 as seed ortholog is 100%.
Bootstrap support for H3DP04 as seed ortholog is 100%.

Group of orthologs #1291. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 T.nigroviridis:81

L0PB39              	100.00%		Q4RPB3              	100.00%
                    	       		H3CFG9              	60.36%
Bootstrap support for L0PB39 as seed ortholog is 100%.
Bootstrap support for Q4RPB3 as seed ortholog is 100%.

Group of orthologs #1292. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 T.nigroviridis:81

L0PHZ2              	100.00%		H3C029              	100.00%
Bootstrap support for L0PHZ2 as seed ortholog is 100%.
Bootstrap support for H3C029 as seed ortholog is 100%.

Group of orthologs #1293. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 T.nigroviridis:81

L0PD90              	100.00%		H3CQM7              	100.00%
Bootstrap support for L0PD90 as seed ortholog is 100%.
Bootstrap support for H3CQM7 as seed ortholog is 100%.

Group of orthologs #1294. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 T.nigroviridis:81

L0PFR5              	100.00%		H3CW84              	100.00%
Bootstrap support for L0PFR5 as seed ortholog is 100%.
Bootstrap support for H3CW84 as seed ortholog is 100%.

Group of orthologs #1295. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 T.nigroviridis:81

L0PE12              	100.00%		H3CZT6              	100.00%
Bootstrap support for L0PE12 as seed ortholog is 100%.
Bootstrap support for H3CZT6 as seed ortholog is 100%.

Group of orthologs #1296. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 T.nigroviridis:34

L0P9A1              	100.00%		H3D8D1              	100.00%
Bootstrap support for L0P9A1 as seed ortholog is 100%.
Bootstrap support for H3D8D1 as seed ortholog is 98%.

Group of orthologs #1297. Best score 80 bits
Score difference with first non-orthologous sequence - P.jiroveci:80 T.nigroviridis:80

L0PD85              	100.00%		H3C888              	100.00%
L0PGV7              	62.93%		
Bootstrap support for L0PD85 as seed ortholog is 100%.
Bootstrap support for H3C888 as seed ortholog is 100%.

Group of orthologs #1298. Best score 80 bits
Score difference with first non-orthologous sequence - P.jiroveci:80 T.nigroviridis:80

L0PDY4              	100.00%		H3CLE8              	100.00%
                    	       		H3C591              	39.83%
Bootstrap support for L0PDY4 as seed ortholog is 100%.
Bootstrap support for H3CLE8 as seed ortholog is 100%.

Group of orthologs #1299. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 T.nigroviridis:3

L0PEL1              	100.00%		H3BXZ9              	100.00%
                    	       		H3DP39              	59.47%
                    	       		H3CLS0              	58.40%
Bootstrap support for L0PEL1 as seed ortholog is 100%.
Bootstrap support for H3BXZ9 as seed ortholog is 55%.
Alternative seed ortholog is H3CTI2 (3 bits away from this cluster)

Group of orthologs #1300. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 T.nigroviridis:79

L0PFU9              	100.00%		H3CNL5              	100.00%
                    	       		H3DP49              	53.44%
Bootstrap support for L0PFU9 as seed ortholog is 100%.
Bootstrap support for H3CNL5 as seed ortholog is 100%.

Group of orthologs #1301. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 T.nigroviridis:79

L0PA74              	100.00%		H3CYL0              	100.00%
Bootstrap support for L0PA74 as seed ortholog is 100%.
Bootstrap support for H3CYL0 as seed ortholog is 100%.

Group of orthologs #1302. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 T.nigroviridis:79

L0PED2              	100.00%		H3CW80              	100.00%
Bootstrap support for L0PED2 as seed ortholog is 100%.
Bootstrap support for H3CW80 as seed ortholog is 100%.

Group of orthologs #1303. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 T.nigroviridis:79

L0PA37              	100.00%		H3D465              	100.00%
Bootstrap support for L0PA37 as seed ortholog is 100%.
Bootstrap support for H3D465 as seed ortholog is 100%.

Group of orthologs #1304. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 T.nigroviridis:79

L0P8R9              	100.00%		Q4S7A1              	100.00%
Bootstrap support for L0P8R9 as seed ortholog is 100%.
Bootstrap support for Q4S7A1 as seed ortholog is 100%.

Group of orthologs #1305. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 T.nigroviridis:79

L0PFV9              	100.00%		H3DNN1              	100.00%
Bootstrap support for L0PFV9 as seed ortholog is 100%.
Bootstrap support for H3DNN1 as seed ortholog is 100%.

Group of orthologs #1306. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 T.nigroviridis:78

L0PGC0              	100.00%		H3DAP8              	100.00%
                    	       		H3CR39              	43.29%
                    	       		H3DM39              	36.96%
                    	       		H3DP59              	22.53%
Bootstrap support for L0PGC0 as seed ortholog is 100%.
Bootstrap support for H3DAP8 as seed ortholog is 100%.

Group of orthologs #1307. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 T.nigroviridis:24

L0PDX9              	100.00%		H3DMA0              	100.00%
                    	       		H3CDN8              	7.32%
Bootstrap support for L0PDX9 as seed ortholog is 100%.
Bootstrap support for H3DMA0 as seed ortholog is 92%.

Group of orthologs #1308. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 T.nigroviridis:78

L0PF93              	100.00%		H3CWG2              	100.00%
Bootstrap support for L0PF93 as seed ortholog is 100%.
Bootstrap support for H3CWG2 as seed ortholog is 100%.

Group of orthologs #1309. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 T.nigroviridis:78

L0PEG8              	100.00%		H3D641              	100.00%
Bootstrap support for L0PEG8 as seed ortholog is 100%.
Bootstrap support for H3D641 as seed ortholog is 100%.

Group of orthologs #1310. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 T.nigroviridis:78

L0PB06              	100.00%		Q4RNE9              	100.00%
Bootstrap support for L0PB06 as seed ortholog is 100%.
Bootstrap support for Q4RNE9 as seed ortholog is 100%.

Group of orthologs #1311. Best score 77 bits
Score difference with first non-orthologous sequence - P.jiroveci:77 T.nigroviridis:77

L0P9A5              	100.00%		H3CDC7              	100.00%
Bootstrap support for L0P9A5 as seed ortholog is 100%.
Bootstrap support for H3CDC7 as seed ortholog is 100%.

Group of orthologs #1312. Best score 77 bits
Score difference with first non-orthologous sequence - P.jiroveci:77 T.nigroviridis:77

L0PGB3              	100.00%		H3CJ42              	100.00%
Bootstrap support for L0PGB3 as seed ortholog is 100%.
Bootstrap support for H3CJ42 as seed ortholog is 100%.

Group of orthologs #1313. Best score 77 bits
Score difference with first non-orthologous sequence - P.jiroveci:22 T.nigroviridis:77

L0PB92              	100.00%		H3CTL9              	100.00%
Bootstrap support for L0PB92 as seed ortholog is 82%.
Bootstrap support for H3CTL9 as seed ortholog is 100%.

Group of orthologs #1314. Best score 77 bits
Score difference with first non-orthologous sequence - P.jiroveci:77 T.nigroviridis:77

L0P9X8              	100.00%		H3D4G8              	100.00%
Bootstrap support for L0P9X8 as seed ortholog is 100%.
Bootstrap support for H3D4G8 as seed ortholog is 100%.

Group of orthologs #1315. Best score 76 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 T.nigroviridis:76

L0P831              	100.00%		H3CJ36              	100.00%
L0PDC1              	41.41%		H3DFC5              	59.73%
Bootstrap support for L0P831 as seed ortholog is 100%.
Bootstrap support for H3CJ36 as seed ortholog is 100%.

Group of orthologs #1316. Best score 76 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 T.nigroviridis:76

L0PF50              	100.00%		H3D2Z5              	100.00%
Bootstrap support for L0PF50 as seed ortholog is 100%.
Bootstrap support for H3D2Z5 as seed ortholog is 100%.

Group of orthologs #1317. Best score 76 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 T.nigroviridis:76

L0PCV9              	100.00%		H3DDC1              	100.00%
Bootstrap support for L0PCV9 as seed ortholog is 100%.
Bootstrap support for H3DDC1 as seed ortholog is 100%.

Group of orthologs #1318. Best score 75 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 T.nigroviridis:75

L0PFF3              	100.00%		H3CVK3              	100.00%
Bootstrap support for L0PFF3 as seed ortholog is 100%.
Bootstrap support for H3CVK3 as seed ortholog is 100%.

Group of orthologs #1319. Best score 75 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 T.nigroviridis:75

L0P9K1              	100.00%		Q4SKV2              	100.00%
Bootstrap support for L0P9K1 as seed ortholog is 100%.
Bootstrap support for Q4SKV2 as seed ortholog is 100%.

Group of orthologs #1320. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 T.nigroviridis:74

L0PBN3              	100.00%		H3CE10              	100.00%
Bootstrap support for L0PBN3 as seed ortholog is 100%.
Bootstrap support for H3CE10 as seed ortholog is 100%.

Group of orthologs #1321. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:32 T.nigroviridis:74

L0P745              	100.00%		H3D6L5              	100.00%
Bootstrap support for L0P745 as seed ortholog is 79%.
Bootstrap support for H3D6L5 as seed ortholog is 100%.

Group of orthologs #1322. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 T.nigroviridis:74

L0P9R4              	100.00%		Q4SDW1              	100.00%
Bootstrap support for L0P9R4 as seed ortholog is 100%.
Bootstrap support for Q4SDW1 as seed ortholog is 100%.

Group of orthologs #1323. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 T.nigroviridis:74

L0PCJ4              	100.00%		Q4SN42              	100.00%
Bootstrap support for L0PCJ4 as seed ortholog is 100%.
Bootstrap support for Q4SN42 as seed ortholog is 100%.

Group of orthologs #1324. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 T.nigroviridis:74

L0PDR4              	100.00%		Q4S4H0              	100.00%
Bootstrap support for L0PDR4 as seed ortholog is 100%.
Bootstrap support for Q4S4H0 as seed ortholog is 100%.

Group of orthologs #1325. Best score 73 bits
Score difference with first non-orthologous sequence - P.jiroveci:73 T.nigroviridis:73

L0P813              	100.00%		Q4TBT9              	100.00%
Bootstrap support for L0P813 as seed ortholog is 100%.
Bootstrap support for Q4TBT9 as seed ortholog is 100%.

Group of orthologs #1326. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 T.nigroviridis:72

L0PE67              	100.00%		H3DD94              	100.00%
                    	       		H3D3P0              	52.30%
Bootstrap support for L0PE67 as seed ortholog is 100%.
Bootstrap support for H3DD94 as seed ortholog is 100%.

Group of orthologs #1327. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 T.nigroviridis:72

L0P988              	100.00%		H3C3W5              	100.00%
Bootstrap support for L0P988 as seed ortholog is 100%.
Bootstrap support for H3C3W5 as seed ortholog is 100%.

Group of orthologs #1328. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 T.nigroviridis:72

L0P954              	100.00%		H3CFT6              	100.00%
Bootstrap support for L0P954 as seed ortholog is 100%.
Bootstrap support for H3CFT6 as seed ortholog is 100%.

Group of orthologs #1329. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 T.nigroviridis:72

L0PF64              	100.00%		H3CIK9              	100.00%
Bootstrap support for L0PF64 as seed ortholog is 100%.
Bootstrap support for H3CIK9 as seed ortholog is 100%.

Group of orthologs #1330. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 T.nigroviridis:72

L0PAF5              	100.00%		H3DF00              	100.00%
Bootstrap support for L0PAF5 as seed ortholog is 100%.
Bootstrap support for H3DF00 as seed ortholog is 100%.

Group of orthologs #1331. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 T.nigroviridis:72

L0PDB5              	100.00%		H3DEC5              	100.00%
Bootstrap support for L0PDB5 as seed ortholog is 100%.
Bootstrap support for H3DEC5 as seed ortholog is 100%.

Group of orthologs #1332. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 T.nigroviridis:72

L0PBR0              	100.00%		Q4S2N7              	100.00%
Bootstrap support for L0PBR0 as seed ortholog is 100%.
Bootstrap support for Q4S2N7 as seed ortholog is 100%.

Group of orthologs #1333. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 T.nigroviridis:72

L0PD91              	100.00%		Q4S9T8              	100.00%
Bootstrap support for L0PD91 as seed ortholog is 100%.
Bootstrap support for Q4S9T8 as seed ortholog is 100%.

Group of orthologs #1334. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 T.nigroviridis:71

L0PGM7              	100.00%		Q4RLT9              	100.00%
L0PGY6              	95.21%		
Bootstrap support for L0PGM7 as seed ortholog is 100%.
Bootstrap support for Q4RLT9 as seed ortholog is 100%.

Group of orthologs #1335. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 T.nigroviridis:71

L0PGS0              	100.00%		H3CCP4              	100.00%
Bootstrap support for L0PGS0 as seed ortholog is 100%.
Bootstrap support for H3CCP4 as seed ortholog is 100%.

Group of orthologs #1336. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 T.nigroviridis:71

L0PBP5              	100.00%		H3DE23              	100.00%
Bootstrap support for L0PBP5 as seed ortholog is 100%.
Bootstrap support for H3DE23 as seed ortholog is 100%.

Group of orthologs #1337. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 T.nigroviridis:71

L0P9V0              	100.00%		Q4SDP8              	100.00%
Bootstrap support for L0P9V0 as seed ortholog is 100%.
Bootstrap support for Q4SDP8 as seed ortholog is 100%.

Group of orthologs #1338. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 T.nigroviridis:71

L0PFU6              	100.00%		H3DQC2              	100.00%
Bootstrap support for L0PFU6 as seed ortholog is 100%.
Bootstrap support for H3DQC2 as seed ortholog is 100%.

Group of orthologs #1339. Best score 70 bits
Score difference with first non-orthologous sequence - P.jiroveci:70 T.nigroviridis:70

L0PCN6              	100.00%		H3CMN9              	100.00%
                    	       		Q4RX43              	100.00%
Bootstrap support for L0PCN6 as seed ortholog is 100%.
Bootstrap support for H3CMN9 as seed ortholog is 100%.
Bootstrap support for Q4RX43 as seed ortholog is 100%.

Group of orthologs #1340. Best score 70 bits
Score difference with first non-orthologous sequence - P.jiroveci:70 T.nigroviridis:70

L0PE59              	100.00%		H3CQK8              	100.00%
Bootstrap support for L0PE59 as seed ortholog is 100%.
Bootstrap support for H3CQK8 as seed ortholog is 100%.

Group of orthologs #1341. Best score 70 bits
Score difference with first non-orthologous sequence - P.jiroveci:70 T.nigroviridis:70

L0PEQ6              	100.00%		H3CRA2              	100.00%
Bootstrap support for L0PEQ6 as seed ortholog is 100%.
Bootstrap support for H3CRA2 as seed ortholog is 100%.

Group of orthologs #1342. Best score 70 bits
Score difference with first non-orthologous sequence - P.jiroveci:70 T.nigroviridis:70

L0PBY4              	100.00%		Q4SRX8              	100.00%
Bootstrap support for L0PBY4 as seed ortholog is 100%.
Bootstrap support for Q4SRX8 as seed ortholog is 100%.

Group of orthologs #1343. Best score 70 bits
Score difference with first non-orthologous sequence - P.jiroveci:70 T.nigroviridis:70

L0PE38              	100.00%		Q4T7V7              	100.00%
Bootstrap support for L0PE38 as seed ortholog is 100%.
Bootstrap support for Q4T7V7 as seed ortholog is 100%.

Group of orthologs #1344. Best score 69 bits
Score difference with first non-orthologous sequence - P.jiroveci:69 T.nigroviridis:24

L0PCA9              	100.00%		H3D9F5              	100.00%
                    	       		H3D207              	35.71%
Bootstrap support for L0PCA9 as seed ortholog is 100%.
Bootstrap support for H3D9F5 as seed ortholog is 84%.

Group of orthologs #1345. Best score 69 bits
Score difference with first non-orthologous sequence - P.jiroveci:69 T.nigroviridis:69

L0PGW3              	100.00%		H3CB24              	100.00%
Bootstrap support for L0PGW3 as seed ortholog is 100%.
Bootstrap support for H3CB24 as seed ortholog is 100%.

Group of orthologs #1346. Best score 69 bits
Score difference with first non-orthologous sequence - P.jiroveci:69 T.nigroviridis:69

L0P937              	100.00%		H3CV42              	100.00%
Bootstrap support for L0P937 as seed ortholog is 100%.
Bootstrap support for H3CV42 as seed ortholog is 100%.

Group of orthologs #1347. Best score 69 bits
Score difference with first non-orthologous sequence - P.jiroveci:69 T.nigroviridis:69

L0PA11              	100.00%		H3DFD4              	100.00%
Bootstrap support for L0PA11 as seed ortholog is 100%.
Bootstrap support for H3DFD4 as seed ortholog is 100%.

Group of orthologs #1348. Best score 68 bits
Score difference with first non-orthologous sequence - P.jiroveci:68 T.nigroviridis:68

L0PC31              	100.00%		H3DEL9              	100.00%
L0PGG5              	84.83%		H3CIN7              	6.56%
                    	       		H3CXV8              	6.56%
Bootstrap support for L0PC31 as seed ortholog is 100%.
Bootstrap support for H3DEL9 as seed ortholog is 100%.

Group of orthologs #1349. Best score 68 bits
Score difference with first non-orthologous sequence - P.jiroveci:68 T.nigroviridis:2

L0PAE4              	100.00%		H3CFX1              	100.00%
                    	       		Q4T8B6              	53.86%
Bootstrap support for L0PAE4 as seed ortholog is 100%.
Bootstrap support for H3CFX1 as seed ortholog is 57%.
Alternative seed ortholog is H3CX28 (2 bits away from this cluster)

Group of orthologs #1350. Best score 68 bits
Score difference with first non-orthologous sequence - P.jiroveci:68 T.nigroviridis:68

L0PAX2              	100.00%		H3CIT6              	100.00%
                    	       		H3D3T4              	19.01%
Bootstrap support for L0PAX2 as seed ortholog is 100%.
Bootstrap support for H3CIT6 as seed ortholog is 100%.

Group of orthologs #1351. Best score 68 bits
Score difference with first non-orthologous sequence - P.jiroveci:68 T.nigroviridis:68

L0PI79              	100.00%		H3D2Q5              	100.00%
                    	       		H3CFL4              	34.92%
Bootstrap support for L0PI79 as seed ortholog is 100%.
Bootstrap support for H3D2Q5 as seed ortholog is 100%.

Group of orthologs #1352. Best score 68 bits
Score difference with first non-orthologous sequence - P.jiroveci:68 T.nigroviridis:68

L0PF02              	100.00%		H3C370              	100.00%
Bootstrap support for L0PF02 as seed ortholog is 100%.
Bootstrap support for H3C370 as seed ortholog is 100%.

Group of orthologs #1353. Best score 68 bits
Score difference with first non-orthologous sequence - P.jiroveci:68 T.nigroviridis:68

L0PGX1              	100.00%		H3C5K3              	100.00%
Bootstrap support for L0PGX1 as seed ortholog is 100%.
Bootstrap support for H3C5K3 as seed ortholog is 100%.

Group of orthologs #1354. Best score 68 bits
Score difference with first non-orthologous sequence - P.jiroveci:68 T.nigroviridis:68

L0PGG4              	100.00%		H3CB08              	100.00%
Bootstrap support for L0PGG4 as seed ortholog is 100%.
Bootstrap support for H3CB08 as seed ortholog is 100%.

Group of orthologs #1355. Best score 68 bits
Score difference with first non-orthologous sequence - P.jiroveci:68 T.nigroviridis:11

L0PC69              	100.00%		H3D8U9              	100.00%
Bootstrap support for L0PC69 as seed ortholog is 100%.
Bootstrap support for H3D8U9 as seed ortholog is 66%.
Alternative seed ortholog is H3CKC0 (11 bits away from this cluster)

Group of orthologs #1356. Best score 68 bits
Score difference with first non-orthologous sequence - P.jiroveci:68 T.nigroviridis:68

L0PA21              	100.00%		H3DRA6              	100.00%
Bootstrap support for L0PA21 as seed ortholog is 100%.
Bootstrap support for H3DRA6 as seed ortholog is 100%.

Group of orthologs #1357. Best score 68 bits
Score difference with first non-orthologous sequence - P.jiroveci:68 T.nigroviridis:68

L0PDH5              	100.00%		H3DP52              	100.00%
Bootstrap support for L0PDH5 as seed ortholog is 100%.
Bootstrap support for H3DP52 as seed ortholog is 100%.

Group of orthologs #1358. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 T.nigroviridis:67

L0PFT1              	100.00%		H3C295              	100.00%
                    	       		H3D9V2              	38.49%
Bootstrap support for L0PFT1 as seed ortholog is 100%.
Bootstrap support for H3C295 as seed ortholog is 100%.

Group of orthologs #1359. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 T.nigroviridis:67

L0PEV7              	100.00%		H3D1A8              	100.00%
                    	       		H3DLY8              	47.81%
Bootstrap support for L0PEV7 as seed ortholog is 100%.
Bootstrap support for H3D1A8 as seed ortholog is 100%.

Group of orthologs #1360. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 T.nigroviridis:67

L0PAE2              	100.00%		H3CR46              	100.00%
Bootstrap support for L0PAE2 as seed ortholog is 100%.
Bootstrap support for H3CR46 as seed ortholog is 100%.

Group of orthologs #1361. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 T.nigroviridis:67

L0PEU8              	100.00%		H3DIZ0              	100.00%
Bootstrap support for L0PEU8 as seed ortholog is 100%.
Bootstrap support for H3DIZ0 as seed ortholog is 100%.

Group of orthologs #1362. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 T.nigroviridis:66

L0PAW3              	100.00%		H3BYT5              	100.00%
Bootstrap support for L0PAW3 as seed ortholog is 100%.
Bootstrap support for H3BYT5 as seed ortholog is 100%.

Group of orthologs #1363. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 T.nigroviridis:66

L0PDG4              	100.00%		H3CF19              	100.00%
Bootstrap support for L0PDG4 as seed ortholog is 100%.
Bootstrap support for H3CF19 as seed ortholog is 100%.

Group of orthologs #1364. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 T.nigroviridis:66

L0PIV0              	100.00%		H3CCQ5              	100.00%
Bootstrap support for L0PIV0 as seed ortholog is 100%.
Bootstrap support for H3CCQ5 as seed ortholog is 100%.

Group of orthologs #1365. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:19 T.nigroviridis:66

L0P9H6              	100.00%		H3CY66              	100.00%
Bootstrap support for L0P9H6 as seed ortholog is 81%.
Bootstrap support for H3CY66 as seed ortholog is 100%.

Group of orthologs #1366. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 T.nigroviridis:66

L0P9V1              	100.00%		H3D6H0              	100.00%
Bootstrap support for L0P9V1 as seed ortholog is 100%.
Bootstrap support for H3D6H0 as seed ortholog is 100%.

Group of orthologs #1367. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 T.nigroviridis:66

L0PG11              	100.00%		H3D3N9              	100.00%
Bootstrap support for L0PG11 as seed ortholog is 100%.
Bootstrap support for H3D3N9 as seed ortholog is 100%.

Group of orthologs #1368. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 T.nigroviridis:66

L0PEH0              	100.00%		H3DL80              	100.00%
Bootstrap support for L0PEH0 as seed ortholog is 100%.
Bootstrap support for H3DL80 as seed ortholog is 100%.

Group of orthologs #1369. Best score 65 bits
Score difference with first non-orthologous sequence - P.jiroveci:65 T.nigroviridis:65

L0PDF6              	100.00%		H3CX16              	100.00%
L0PBB5              	100.00%		H3CGV7              	100.00%
Bootstrap support for L0PDF6 as seed ortholog is 100%.
Bootstrap support for L0PBB5 as seed ortholog is 100%.
Bootstrap support for H3CX16 as seed ortholog is 100%.
Bootstrap support for H3CGV7 as seed ortholog is 100%.

Group of orthologs #1370. Best score 65 bits
Score difference with first non-orthologous sequence - P.jiroveci:65 T.nigroviridis:65

L0P9T8              	100.00%		H3CKT3              	100.00%
Bootstrap support for L0P9T8 as seed ortholog is 100%.
Bootstrap support for H3CKT3 as seed ortholog is 100%.

Group of orthologs #1371. Best score 65 bits
Score difference with first non-orthologous sequence - P.jiroveci:65 T.nigroviridis:65

L0PH05              	100.00%		H3CCS7              	100.00%
Bootstrap support for L0PH05 as seed ortholog is 100%.
Bootstrap support for H3CCS7 as seed ortholog is 100%.

Group of orthologs #1372. Best score 65 bits
Score difference with first non-orthologous sequence - P.jiroveci:65 T.nigroviridis:65

L0PCB6              	100.00%		H3CPB8              	100.00%
Bootstrap support for L0PCB6 as seed ortholog is 100%.
Bootstrap support for H3CPB8 as seed ortholog is 100%.

Group of orthologs #1373. Best score 65 bits
Score difference with first non-orthologous sequence - P.jiroveci:65 T.nigroviridis:65

L0PIQ9              	100.00%		Q4SIG2              	100.00%
Bootstrap support for L0PIQ9 as seed ortholog is 100%.
Bootstrap support for Q4SIG2 as seed ortholog is 100%.

Group of orthologs #1374. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 T.nigroviridis:64

L0P8D1              	100.00%		H3C3T9              	100.00%
Bootstrap support for L0P8D1 as seed ortholog is 100%.
Bootstrap support for H3C3T9 as seed ortholog is 100%.

Group of orthologs #1375. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 T.nigroviridis:2

L0PEB3              	100.00%		A0JGZ9              	100.00%
Bootstrap support for L0PEB3 as seed ortholog is 100%.
Bootstrap support for A0JGZ9 as seed ortholog is 49%.
Alternative seed ortholog is H3DGS3 (2 bits away from this cluster)

Group of orthologs #1376. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 T.nigroviridis:64

L0PG83              	100.00%		H3CT68              	100.00%
Bootstrap support for L0PG83 as seed ortholog is 100%.
Bootstrap support for H3CT68 as seed ortholog is 100%.

Group of orthologs #1377. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 T.nigroviridis:64

L0P9M2              	100.00%		H3DKG8              	100.00%
Bootstrap support for L0P9M2 as seed ortholog is 100%.
Bootstrap support for H3DKG8 as seed ortholog is 100%.

Group of orthologs #1378. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 T.nigroviridis:64

L0PGR8              	100.00%		H3DEQ5              	100.00%
Bootstrap support for L0PGR8 as seed ortholog is 100%.
Bootstrap support for H3DEQ5 as seed ortholog is 100%.

Group of orthologs #1379. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 T.nigroviridis:64

L0PG56              	100.00%		H3DKI5              	100.00%
Bootstrap support for L0PG56 as seed ortholog is 100%.
Bootstrap support for H3DKI5 as seed ortholog is 100%.

Group of orthologs #1380. Best score 63 bits
Score difference with first non-orthologous sequence - P.jiroveci:6 T.nigroviridis:2

L0PEH1              	100.00%		H3C8W4              	100.00%
Bootstrap support for L0PEH1 as seed ortholog is 57%.
Alternative seed ortholog is L0PCR9 (6 bits away from this cluster)
Bootstrap support for H3C8W4 as seed ortholog is 48%.
Alternative seed ortholog is H3D8Y9 (2 bits away from this cluster)

Group of orthologs #1381. Best score 63 bits
Score difference with first non-orthologous sequence - P.jiroveci:63 T.nigroviridis:63

L0P9X6              	100.00%		H3CV74              	100.00%
Bootstrap support for L0P9X6 as seed ortholog is 100%.
Bootstrap support for H3CV74 as seed ortholog is 100%.

Group of orthologs #1382. Best score 63 bits
Score difference with first non-orthologous sequence - P.jiroveci:63 T.nigroviridis:63

L0PE07              	100.00%		H3D309              	100.00%
Bootstrap support for L0PE07 as seed ortholog is 100%.
Bootstrap support for H3D309 as seed ortholog is 100%.

Group of orthologs #1383. Best score 63 bits
Score difference with first non-orthologous sequence - P.jiroveci:63 T.nigroviridis:63

L0PDQ0              	100.00%		H3DLW8              	100.00%
Bootstrap support for L0PDQ0 as seed ortholog is 100%.
Bootstrap support for H3DLW8 as seed ortholog is 100%.

Group of orthologs #1384. Best score 62 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 T.nigroviridis:62

L0PBT4              	100.00%		H3DPL2              	100.00%
                    	       		H3D0S0              	42.11%
                    	       		H3CWH5              	41.58%
                    	       		H3D2Z4              	39.21%
Bootstrap support for L0PBT4 as seed ortholog is 100%.
Bootstrap support for H3DPL2 as seed ortholog is 100%.

Group of orthologs #1385. Best score 62 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 T.nigroviridis:62

L0P9U7              	100.00%		H3CM03              	100.00%
L0PCM7              	100.00%		
Bootstrap support for L0P9U7 as seed ortholog is 100%.
Bootstrap support for L0PCM7 as seed ortholog is 100%.
Bootstrap support for H3CM03 as seed ortholog is 100%.

Group of orthologs #1386. Best score 62 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 T.nigroviridis:62

L0PBR6              	100.00%		H3CLH9              	100.00%
Bootstrap support for L0PBR6 as seed ortholog is 100%.
Bootstrap support for H3CLH9 as seed ortholog is 100%.

Group of orthologs #1387. Best score 62 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 T.nigroviridis:62

L0PEY1              	100.00%		H3DKD6              	100.00%
Bootstrap support for L0PEY1 as seed ortholog is 100%.
Bootstrap support for H3DKD6 as seed ortholog is 100%.

Group of orthologs #1388. Best score 62 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 T.nigroviridis:62

L0PBS8              	100.00%		Q4S6L9              	100.00%
Bootstrap support for L0PBS8 as seed ortholog is 100%.
Bootstrap support for Q4S6L9 as seed ortholog is 100%.

Group of orthologs #1389. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 T.nigroviridis:61

L0PFG2              	100.00%		H3D466              	100.00%
                    	       		H3DB31              	28.24%
Bootstrap support for L0PFG2 as seed ortholog is 100%.
Bootstrap support for H3D466 as seed ortholog is 100%.

Group of orthologs #1390. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 T.nigroviridis:61

L0P9P1              	100.00%		Q4T624              	100.00%
Bootstrap support for L0P9P1 as seed ortholog is 100%.
Bootstrap support for Q4T624 as seed ortholog is 100%.

Group of orthologs #1391. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 T.nigroviridis:61

L0PE14              	100.00%		Q4TAB3              	100.00%
Bootstrap support for L0PE14 as seed ortholog is 100%.
Bootstrap support for Q4TAB3 as seed ortholog is 100%.

Group of orthologs #1392. Best score 60 bits
Score difference with first non-orthologous sequence - P.jiroveci:60 T.nigroviridis:60

L0PES9              	100.00%		H3CRK2              	100.00%
                    	       		H3CZA9              	58.67%
                    	       		H3CZ62              	41.92%
                    	       		H3CP21              	35.01%
                    	       		H3DF04              	35.01%
                    	       		H3CIS2              	33.26%
                    	       		H3DRE0              	9.02%
Bootstrap support for L0PES9 as seed ortholog is 100%.
Bootstrap support for H3CRK2 as seed ortholog is 100%.

Group of orthologs #1393. Best score 60 bits
Score difference with first non-orthologous sequence - P.jiroveci:60 T.nigroviridis:60

L0PAM9              	100.00%		H3D0E4              	100.00%
                    	       		H3D5Z3              	38.10%
Bootstrap support for L0PAM9 as seed ortholog is 100%.
Bootstrap support for H3D0E4 as seed ortholog is 100%.

Group of orthologs #1394. Best score 60 bits
Score difference with first non-orthologous sequence - P.jiroveci:60 T.nigroviridis:60

L0P8I2              	100.00%		H3CIP9              	100.00%
Bootstrap support for L0P8I2 as seed ortholog is 100%.
Bootstrap support for H3CIP9 as seed ortholog is 100%.

Group of orthologs #1395. Best score 60 bits
Score difference with first non-orthologous sequence - P.jiroveci:60 T.nigroviridis:6

L0PBA1              	100.00%		H3CY37              	100.00%
Bootstrap support for L0PBA1 as seed ortholog is 100%.
Bootstrap support for H3CY37 as seed ortholog is 61%.
Alternative seed ortholog is H3DBX0 (6 bits away from this cluster)

Group of orthologs #1396. Best score 60 bits
Score difference with first non-orthologous sequence - P.jiroveci:60 T.nigroviridis:60

L0PFF4              	100.00%		H3DPQ4              	100.00%
Bootstrap support for L0PFF4 as seed ortholog is 100%.
Bootstrap support for H3DPQ4 as seed ortholog is 100%.

Group of orthologs #1397. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:7 T.nigroviridis:59

L0PDN9              	100.00%		H3CNR1              	100.00%
                    	       		H3DM38              	54.87%
Bootstrap support for L0PDN9 as seed ortholog is 57%.
Alternative seed ortholog is L0P7S0 (7 bits away from this cluster)
Bootstrap support for H3CNR1 as seed ortholog is 100%.

Group of orthologs #1398. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 T.nigroviridis:59

L0PDY5              	100.00%		H3C082              	100.00%
Bootstrap support for L0PDY5 as seed ortholog is 100%.
Bootstrap support for H3C082 as seed ortholog is 100%.

Group of orthologs #1399. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 T.nigroviridis:59

L0PE66              	100.00%		H3D4I8              	100.00%
Bootstrap support for L0PE66 as seed ortholog is 100%.
Bootstrap support for H3D4I8 as seed ortholog is 100%.

Group of orthologs #1400. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 T.nigroviridis:59

L0PFV5              	100.00%		H3D2X3              	100.00%
Bootstrap support for L0PFV5 as seed ortholog is 100%.
Bootstrap support for H3D2X3 as seed ortholog is 100%.

Group of orthologs #1401. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 T.nigroviridis:59

L0P7E6              	100.00%		Q4RYG3              	100.00%
Bootstrap support for L0P7E6 as seed ortholog is 100%.
Bootstrap support for Q4RYG3 as seed ortholog is 100%.

Group of orthologs #1402. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 T.nigroviridis:59

L0PDW8              	100.00%		H3DJX4              	100.00%
Bootstrap support for L0PDW8 as seed ortholog is 100%.
Bootstrap support for H3DJX4 as seed ortholog is 100%.

Group of orthologs #1403. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 T.nigroviridis:59

L0PDE2              	100.00%		Q4TA03              	100.00%
Bootstrap support for L0PDE2 as seed ortholog is 100%.
Bootstrap support for Q4TA03 as seed ortholog is 100%.

Group of orthologs #1404. Best score 58 bits
Score difference with first non-orthologous sequence - P.jiroveci:58 T.nigroviridis:58

L0P7Q6              	100.00%		H3CWT2              	100.00%
Bootstrap support for L0P7Q6 as seed ortholog is 100%.
Bootstrap support for H3CWT2 as seed ortholog is 100%.

Group of orthologs #1405. Best score 58 bits
Score difference with first non-orthologous sequence - P.jiroveci:58 T.nigroviridis:58

L0PAI3              	100.00%		Q4SB74              	100.00%
Bootstrap support for L0PAI3 as seed ortholog is 100%.
Bootstrap support for Q4SB74 as seed ortholog is 100%.

Group of orthologs #1406. Best score 57 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 T.nigroviridis:57

L0P929              	100.00%		H3DG35              	100.00%
                    	       		H3C9T8              	59.54%
Bootstrap support for L0P929 as seed ortholog is 100%.
Bootstrap support for H3DG35 as seed ortholog is 100%.

Group of orthologs #1407. Best score 57 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 T.nigroviridis:57

L0PH50              	100.00%		H3BX66              	100.00%
Bootstrap support for L0PH50 as seed ortholog is 100%.
Bootstrap support for H3BX66 as seed ortholog is 100%.

Group of orthologs #1408. Best score 57 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 T.nigroviridis:57

L0PDS8              	100.00%		H3CW85              	100.00%
Bootstrap support for L0PDS8 as seed ortholog is 100%.
Bootstrap support for H3CW85 as seed ortholog is 100%.

Group of orthologs #1409. Best score 57 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 T.nigroviridis:57

L0PFE2              	100.00%		H3CY57              	100.00%
Bootstrap support for L0PFE2 as seed ortholog is 100%.
Bootstrap support for H3CY57 as seed ortholog is 100%.

Group of orthologs #1410. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 T.nigroviridis:56

L0PDS6              	100.00%		H3D2E0              	100.00%
                    	       		H3CVD9              	33.38%
                    	       		H3C866              	10.64%
                    	       		H3CCB6              	9.97%
                    	       		H3CGW3              	6.78%
Bootstrap support for L0PDS6 as seed ortholog is 100%.
Bootstrap support for H3D2E0 as seed ortholog is 100%.

Group of orthologs #1411. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 T.nigroviridis:56

L0PFT6              	100.00%		H3CHT1              	100.00%
L0P6V3              	45.67%		
Bootstrap support for L0PFT6 as seed ortholog is 100%.
Bootstrap support for H3CHT1 as seed ortholog is 100%.

Group of orthologs #1412. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 T.nigroviridis:56

L0P8A9              	100.00%		H3C269              	100.00%
Bootstrap support for L0P8A9 as seed ortholog is 100%.
Bootstrap support for H3C269 as seed ortholog is 100%.

Group of orthologs #1413. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 T.nigroviridis:56

L0PB51              	100.00%		H3CQ53              	100.00%
Bootstrap support for L0PB51 as seed ortholog is 100%.
Bootstrap support for H3CQ53 as seed ortholog is 100%.

Group of orthologs #1414. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 T.nigroviridis:56

L0PB91              	100.00%		H3CZW2              	100.00%
Bootstrap support for L0PB91 as seed ortholog is 100%.
Bootstrap support for H3CZW2 as seed ortholog is 100%.

Group of orthologs #1415. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 T.nigroviridis:56

L0PH34              	100.00%		H3DBT4              	100.00%
Bootstrap support for L0PH34 as seed ortholog is 100%.
Bootstrap support for H3DBT4 as seed ortholog is 100%.

Group of orthologs #1416. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 T.nigroviridis:56

L0PDN1              	100.00%		Q4SMY3              	100.00%
Bootstrap support for L0PDN1 as seed ortholog is 100%.
Bootstrap support for Q4SMY3 as seed ortholog is 100%.

Group of orthologs #1417. Best score 55 bits
Score difference with first non-orthologous sequence - P.jiroveci:55 T.nigroviridis:55

L0P7U7              	100.00%		H3D7W0              	100.00%
                    	       		H3D6D8              	51.79%
Bootstrap support for L0P7U7 as seed ortholog is 100%.
Bootstrap support for H3D7W0 as seed ortholog is 100%.

Group of orthologs #1418. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 T.nigroviridis:54

L0PBK6              	100.00%		H3CEE5              	100.00%
                    	       		H3BZ65              	7.08%
                    	       		H3C6N2              	6.15%
Bootstrap support for L0PBK6 as seed ortholog is 100%.
Bootstrap support for H3CEE5 as seed ortholog is 100%.

Group of orthologs #1419. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 T.nigroviridis:54

L0P7X8              	100.00%		H3CC95              	100.00%
Bootstrap support for L0P7X8 as seed ortholog is 100%.
Bootstrap support for H3CC95 as seed ortholog is 100%.

Group of orthologs #1420. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 T.nigroviridis:54

L0PE69              	100.00%		H3C285              	100.00%
Bootstrap support for L0PE69 as seed ortholog is 100%.
Bootstrap support for H3C285 as seed ortholog is 100%.

Group of orthologs #1421. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 T.nigroviridis:54

L0PGU4              	100.00%		H3D1M4              	100.00%
Bootstrap support for L0PGU4 as seed ortholog is 100%.
Bootstrap support for H3D1M4 as seed ortholog is 100%.

Group of orthologs #1422. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 T.nigroviridis:54

L0P9P6              	100.00%		H3DNV9              	100.00%
Bootstrap support for L0P9P6 as seed ortholog is 100%.
Bootstrap support for H3DNV9 as seed ortholog is 100%.

Group of orthologs #1423. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 T.nigroviridis:54

L0P9A3              	100.00%		Q4RLD5              	100.00%
Bootstrap support for L0P9A3 as seed ortholog is 100%.
Bootstrap support for Q4RLD5 as seed ortholog is 100%.

Group of orthologs #1424. Best score 53 bits
Score difference with first non-orthologous sequence - P.jiroveci:53 T.nigroviridis:53

L0P8R3              	100.00%		H3BY71              	100.00%
L0PB56              	100.00%		
Bootstrap support for L0P8R3 as seed ortholog is 100%.
Bootstrap support for L0PB56 as seed ortholog is 100%.
Bootstrap support for H3BY71 as seed ortholog is 100%.

Group of orthologs #1425. Best score 53 bits
Score difference with first non-orthologous sequence - P.jiroveci:53 T.nigroviridis:53

L0PF40              	100.00%		H3CGW5              	100.00%
                    	       		H3D5I8              	16.94%
Bootstrap support for L0PF40 as seed ortholog is 100%.
Bootstrap support for H3CGW5 as seed ortholog is 100%.

Group of orthologs #1426. Best score 53 bits
Score difference with first non-orthologous sequence - P.jiroveci:53 T.nigroviridis:53

L0PFE5              	100.00%		H3C701              	100.00%
Bootstrap support for L0PFE5 as seed ortholog is 100%.
Bootstrap support for H3C701 as seed ortholog is 100%.

Group of orthologs #1427. Best score 52 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 T.nigroviridis:52

L0PD80              	100.00%		H3C6F6              	100.00%
Bootstrap support for L0PD80 as seed ortholog is 100%.
Bootstrap support for H3C6F6 as seed ortholog is 100%.

Group of orthologs #1428. Best score 52 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 T.nigroviridis:52

L0P8K9              	100.00%		H3CZX0              	100.00%
Bootstrap support for L0P8K9 as seed ortholog is 100%.
Bootstrap support for H3CZX0 as seed ortholog is 100%.

Group of orthologs #1429. Best score 52 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 T.nigroviridis:52

L0PBA0              	100.00%		Q4RAQ4              	100.00%
Bootstrap support for L0PBA0 as seed ortholog is 100%.
Bootstrap support for Q4RAQ4 as seed ortholog is 100%.

Group of orthologs #1430. Best score 52 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 T.nigroviridis:52

L0PGI8              	100.00%		Q4RUG3              	100.00%
Bootstrap support for L0PGI8 as seed ortholog is 100%.
Bootstrap support for Q4RUG3 as seed ortholog is 100%.

Group of orthologs #1431. Best score 51 bits
Score difference with first non-orthologous sequence - P.jiroveci:51 T.nigroviridis:51

L0PA64              	100.00%		H3DIW2              	100.00%
                    	       		H3DHS3              	13.06%
                    	       		H3DI22              	10.35%
                    	       		H3CSC8              	9.41%
                    	       		H3CPK4              	8.71%
Bootstrap support for L0PA64 as seed ortholog is 100%.
Bootstrap support for H3DIW2 as seed ortholog is 100%.

Group of orthologs #1432. Best score 51 bits
Score difference with first non-orthologous sequence - P.jiroveci:51 T.nigroviridis:51

L0PBP6              	100.00%		H3D905              	100.00%
L0PHL6              	91.76%		
Bootstrap support for L0PBP6 as seed ortholog is 100%.
Bootstrap support for H3D905 as seed ortholog is 100%.

Group of orthologs #1433. Best score 51 bits
Score difference with first non-orthologous sequence - P.jiroveci:51 T.nigroviridis:51

L0PAV7              	100.00%		H3DQT4              	100.00%
L0PBJ9              	100.00%		
Bootstrap support for L0PAV7 as seed ortholog is 100%.
Bootstrap support for L0PBJ9 as seed ortholog is 100%.
Bootstrap support for H3DQT4 as seed ortholog is 100%.

Group of orthologs #1434. Best score 51 bits
Score difference with first non-orthologous sequence - P.jiroveci:51 T.nigroviridis:51

L0PF85              	100.00%		Q4SWG8              	100.00%
Bootstrap support for L0PF85 as seed ortholog is 100%.
Bootstrap support for Q4SWG8 as seed ortholog is 100%.

Group of orthologs #1435. Best score 50 bits
Score difference with first non-orthologous sequence - P.jiroveci:50 T.nigroviridis:50

L0PEE9              	100.00%		H3CQZ0              	100.00%
                    	       		Q4S3T4              	67.14%
Bootstrap support for L0PEE9 as seed ortholog is 100%.
Bootstrap support for H3CQZ0 as seed ortholog is 100%.

Group of orthologs #1436. Best score 50 bits
Score difference with first non-orthologous sequence - P.jiroveci:50 T.nigroviridis:50

L0P815              	100.00%		H3D4B9              	100.00%
Bootstrap support for L0P815 as seed ortholog is 100%.
Bootstrap support for H3D4B9 as seed ortholog is 100%.

Group of orthologs #1437. Best score 50 bits
Score difference with first non-orthologous sequence - P.jiroveci:50 T.nigroviridis:50

L0P8V0              	100.00%		H3D762              	100.00%
Bootstrap support for L0P8V0 as seed ortholog is 100%.
Bootstrap support for H3D762 as seed ortholog is 100%.

Group of orthologs #1438. Best score 50 bits
Score difference with first non-orthologous sequence - P.jiroveci:50 T.nigroviridis:50

L0PEH3              	100.00%		H3D2Y1              	100.00%
Bootstrap support for L0PEH3 as seed ortholog is 100%.
Bootstrap support for H3D2Y1 as seed ortholog is 100%.

Group of orthologs #1439. Best score 50 bits
Score difference with first non-orthologous sequence - P.jiroveci:50 T.nigroviridis:50

L0PFH5              	100.00%		H3DBK3              	100.00%
Bootstrap support for L0PFH5 as seed ortholog is 100%.
Bootstrap support for H3DBK3 as seed ortholog is 100%.

Group of orthologs #1440. Best score 49 bits
Score difference with first non-orthologous sequence - P.jiroveci:49 T.nigroviridis:49

L0PAG5              	100.00%		H3CN50              	100.00%
Bootstrap support for L0PAG5 as seed ortholog is 100%.
Bootstrap support for H3CN50 as seed ortholog is 100%.

Group of orthologs #1441. Best score 49 bits
Score difference with first non-orthologous sequence - P.jiroveci:49 T.nigroviridis:49

L0PAD5              	100.00%		H3DM28              	100.00%
Bootstrap support for L0PAD5 as seed ortholog is 100%.
Bootstrap support for H3DM28 as seed ortholog is 100%.

Group of orthologs #1442. Best score 49 bits
Score difference with first non-orthologous sequence - P.jiroveci:49 T.nigroviridis:49

L0P994              	100.00%		Q4ST53              	100.00%
Bootstrap support for L0P994 as seed ortholog is 100%.
Bootstrap support for Q4ST53 as seed ortholog is 100%.

Group of orthologs #1443. Best score 48 bits
Score difference with first non-orthologous sequence - P.jiroveci:48 T.nigroviridis:48

L0PHJ4              	100.00%		H3C2R2              	100.00%
Bootstrap support for L0PHJ4 as seed ortholog is 100%.
Bootstrap support for H3C2R2 as seed ortholog is 100%.

Group of orthologs #1444. Best score 48 bits
Score difference with first non-orthologous sequence - P.jiroveci:48 T.nigroviridis:48

L0PFN8              	100.00%		H3DJU8              	100.00%
Bootstrap support for L0PFN8 as seed ortholog is 100%.
Bootstrap support for H3DJU8 as seed ortholog is 100%.

Group of orthologs #1445. Best score 47 bits
Score difference with first non-orthologous sequence - P.jiroveci:47 T.nigroviridis:47

L0PGZ4              	100.00%		H3CC11              	100.00%
Bootstrap support for L0PGZ4 as seed ortholog is 100%.
Bootstrap support for H3CC11 as seed ortholog is 100%.

Group of orthologs #1446. Best score 47 bits
Score difference with first non-orthologous sequence - P.jiroveci:47 T.nigroviridis:47

L0PA08              	100.00%		H3D058              	100.00%
Bootstrap support for L0PA08 as seed ortholog is 100%.
Bootstrap support for H3D058 as seed ortholog is 100%.

Group of orthologs #1447. Best score 47 bits
Score difference with first non-orthologous sequence - P.jiroveci:47 T.nigroviridis:47

L0PGA0              	100.00%		H3DQX1              	100.00%
Bootstrap support for L0PGA0 as seed ortholog is 100%.
Bootstrap support for H3DQX1 as seed ortholog is 100%.

Group of orthologs #1448. Best score 45 bits
Score difference with first non-orthologous sequence - P.jiroveci:45 T.nigroviridis:45

L0PA39              	100.00%		Q4RR82              	100.00%
                    	       		H3D6B0              	28.57%
                    	       		H3BVJ6              	14.29%
Bootstrap support for L0PA39 as seed ortholog is 100%.
Bootstrap support for Q4RR82 as seed ortholog is 100%.

Group of orthologs #1449. Best score 45 bits
Score difference with first non-orthologous sequence - P.jiroveci:45 T.nigroviridis:45

L0PGX3              	100.00%		Q4RYS7              	100.00%
                    	       		H3D586              	62.30%
                    	       		H3D0G5              	25.68%
Bootstrap support for L0PGX3 as seed ortholog is 100%.
Bootstrap support for Q4RYS7 as seed ortholog is 100%.

Group of orthologs #1450. Best score 44 bits
Score difference with first non-orthologous sequence - P.jiroveci:44 T.nigroviridis:44

L0PCQ1              	100.00%		H3DC84              	100.00%
                    	       		H3DHQ3              	32.80%
                    	       		H3C9H2              	24.28%
                    	       		H3DM64              	21.10%
                    	       		H3D9G1              	18.06%
                    	       		H3CNN3              	17.49%
                    	       		H3DBY5              	9.10%
                    	       		H3DBZ2              	8.82%
                    	       		H3CQ77              	6.50%
Bootstrap support for L0PCQ1 as seed ortholog is 100%.
Bootstrap support for H3DC84 as seed ortholog is 100%.

Group of orthologs #1451. Best score 44 bits
Score difference with first non-orthologous sequence - P.jiroveci:44 T.nigroviridis:44

L0PD94              	100.00%		H3C0C6              	100.00%
                    	       		H3CGI2              	87.50%
Bootstrap support for L0PD94 as seed ortholog is 100%.
Bootstrap support for H3C0C6 as seed ortholog is 100%.

Group of orthologs #1452. Best score 43 bits
Score difference with first non-orthologous sequence - P.jiroveci:43 T.nigroviridis:43

L0P916              	100.00%		H3BYH3              	100.00%
                    	       		Q4RIS3              	46.76%
Bootstrap support for L0P916 as seed ortholog is 100%.
Bootstrap support for H3BYH3 as seed ortholog is 100%.

Group of orthologs #1453. Best score 43 bits
Score difference with first non-orthologous sequence - P.jiroveci:43 T.nigroviridis:43

L0PGE9              	100.00%		Q4RGM4              	100.00%
Bootstrap support for L0PGE9 as seed ortholog is 100%.
Bootstrap support for Q4RGM4 as seed ortholog is 100%.

Group of orthologs #1454. Best score 42 bits
Score difference with first non-orthologous sequence - P.jiroveci:42 T.nigroviridis:42

L0P9T4              	100.00%		H3DIV8              	6.65%
L0PFA0              	100.00%		Q4RHL8              	100.00%
                    	       		H3C6W2              	5.96%
Bootstrap support for L0P9T4 as seed ortholog is 100%.
Bootstrap support for L0PFA0 as seed ortholog is 100%.
Bootstrap support for Q4RHL8 as seed ortholog is 100%.

Group of orthologs #1455. Best score 42 bits
Score difference with first non-orthologous sequence - P.jiroveci:42 T.nigroviridis:42

L0PGP7              	100.00%		H3DPF4              	100.00%
Bootstrap support for L0PGP7 as seed ortholog is 100%.
Bootstrap support for H3DPF4 as seed ortholog is 100%.

Group of orthologs #1456. Best score 41 bits
Score difference with first non-orthologous sequence - P.jiroveci:41 T.nigroviridis:41

L0PG70              	100.00%		H3CWW7              	100.00%
Bootstrap support for L0PG70 as seed ortholog is 100%.
Bootstrap support for H3CWW7 as seed ortholog is 100%.