###################################
182 groups of orthologs
219 in-paralogs from P.jiroveci
217 in-paralogs from T.maritima
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 769 bits
Score difference with first non-orthologous sequence - P.jiroveci:769 T.maritima:769

L0P7C3              	100.00%		Q9WZ27              	100.00%
Bootstrap support for L0P7C3 as seed ortholog is 100%.
Bootstrap support for Q9WZ27 as seed ortholog is 100%.

Group of orthologs #2. Best score 683 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 T.maritima:683

L0PDB3              	100.00%		Q9X2D7              	100.00%
Bootstrap support for L0PDB3 as seed ortholog is 99%.
Bootstrap support for Q9X2D7 as seed ortholog is 100%.

Group of orthologs #3. Best score 615 bits
Score difference with first non-orthologous sequence - P.jiroveci:221 T.maritima:615

L0P833              	100.00%		Q9X1U7              	100.00%
Bootstrap support for L0P833 as seed ortholog is 100%.
Bootstrap support for Q9X1U7 as seed ortholog is 100%.

Group of orthologs #4. Best score 588 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 T.maritima:520

L0PFS2              	100.00%		Q9WYK6              	100.00%
Bootstrap support for L0PFS2 as seed ortholog is 96%.
Bootstrap support for Q9WYK6 as seed ortholog is 100%.

Group of orthologs #5. Best score 576 bits
Score difference with first non-orthologous sequence - P.jiroveci:576 T.maritima:576

L0P9C7              	100.00%		Q9WY41              	100.00%
                    	       		Q9X1B1              	19.41%
Bootstrap support for L0P9C7 as seed ortholog is 100%.
Bootstrap support for Q9WY41 as seed ortholog is 100%.

Group of orthologs #6. Best score 560 bits
Score difference with first non-orthologous sequence - P.jiroveci:332 T.maritima:560

L0PCD8              	100.00%		P46213              	100.00%
Bootstrap support for L0PCD8 as seed ortholog is 100%.
Bootstrap support for P46213 as seed ortholog is 100%.

Group of orthologs #7. Best score 544 bits
Score difference with first non-orthologous sequence - P.jiroveci:173 T.maritima:188

L0PBP8              	100.00%		P38525              	100.00%
Bootstrap support for L0PBP8 as seed ortholog is 99%.
Bootstrap support for P38525 as seed ortholog is 99%.

Group of orthologs #8. Best score 531 bits
Score difference with first non-orthologous sequence - P.jiroveci:423 T.maritima:531

L0PDM6              	100.00%		Q9WYX6              	100.00%
Bootstrap support for L0PDM6 as seed ortholog is 100%.
Bootstrap support for Q9WYX6 as seed ortholog is 100%.

Group of orthologs #9. Best score 497 bits
Score difference with first non-orthologous sequence - P.jiroveci:322 T.maritima:497

L0P9G2              	100.00%		P13537              	100.00%
Bootstrap support for L0P9G2 as seed ortholog is 100%.
Bootstrap support for P13537 as seed ortholog is 100%.

Group of orthologs #10. Best score 480 bits
Score difference with first non-orthologous sequence - P.jiroveci:178 T.maritima:480

L0P9U5              	100.00%		Q9WZJ9              	100.00%
Bootstrap support for L0P9U5 as seed ortholog is 99%.
Bootstrap support for Q9WZJ9 as seed ortholog is 100%.

Group of orthologs #11. Best score 477 bits
Score difference with first non-orthologous sequence - P.jiroveci:356 T.maritima:477

L0PBN1              	100.00%		Q9WY15              	100.00%
Bootstrap support for L0PBN1 as seed ortholog is 100%.
Bootstrap support for Q9WY15 as seed ortholog is 100%.

Group of orthologs #12. Best score 469 bits
Score difference with first non-orthologous sequence - P.jiroveci:469 T.maritima:334

L0PET9              	100.00%		Q9X1E4              	100.00%
                    	       		Q9X049              	9.70%
Bootstrap support for L0PET9 as seed ortholog is 100%.
Bootstrap support for Q9X1E4 as seed ortholog is 100%.

Group of orthologs #13. Best score 460 bits
Score difference with first non-orthologous sequence - P.jiroveci:460 T.maritima:460

L0PCP1              	100.00%		Q9WYA1              	100.00%
Bootstrap support for L0PCP1 as seed ortholog is 100%.
Bootstrap support for Q9WYA1 as seed ortholog is 100%.

Group of orthologs #14. Best score 458 bits
Score difference with first non-orthologous sequence - P.jiroveci:458 T.maritima:458

L0PAQ1              	100.00%		Q9X2E0              	100.00%
Bootstrap support for L0PAQ1 as seed ortholog is 100%.
Bootstrap support for Q9X2E0 as seed ortholog is 100%.

Group of orthologs #15. Best score 452 bits
Score difference with first non-orthologous sequence - P.jiroveci:452 T.maritima:452

L0PDQ4              	100.00%		Q9X1B6              	100.00%
Bootstrap support for L0PDQ4 as seed ortholog is 100%.
Bootstrap support for Q9X1B6 as seed ortholog is 100%.

Group of orthologs #16. Best score 426 bits
Score difference with first non-orthologous sequence - P.jiroveci:426 T.maritima:426

L0PEK9              	100.00%		Q9X1W8              	100.00%
Bootstrap support for L0PEK9 as seed ortholog is 100%.
Bootstrap support for Q9X1W8 as seed ortholog is 100%.

Group of orthologs #17. Best score 421 bits
Score difference with first non-orthologous sequence - P.jiroveci:421 T.maritima:421

L0PBG8              	100.00%		Q9X1V8              	100.00%
Bootstrap support for L0PBG8 as seed ortholog is 100%.
Bootstrap support for Q9X1V8 as seed ortholog is 100%.

Group of orthologs #18. Best score 413 bits
Score difference with first non-orthologous sequence - P.jiroveci:332 T.maritima:413

L0PDC9              	100.00%		O50550              	100.00%
Bootstrap support for L0PDC9 as seed ortholog is 100%.
Bootstrap support for O50550 as seed ortholog is 100%.

Group of orthologs #19. Best score 401 bits
Score difference with first non-orthologous sequence - P.jiroveci:401 T.maritima:401

L0PHB7              	100.00%		Q9WYR9              	100.00%
Bootstrap support for L0PHB7 as seed ortholog is 100%.
Bootstrap support for Q9WYR9 as seed ortholog is 100%.

Group of orthologs #20. Best score 400 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 T.maritima:400

L0PFG7              	100.00%		Q9X231              	100.00%
Bootstrap support for L0PFG7 as seed ortholog is 99%.
Bootstrap support for Q9X231 as seed ortholog is 100%.

Group of orthologs #21. Best score 399 bits
Score difference with first non-orthologous sequence - P.jiroveci:399 T.maritima:399

L0PC65              	100.00%		Q9WZR0              	100.00%
Bootstrap support for L0PC65 as seed ortholog is 100%.
Bootstrap support for Q9WZR0 as seed ortholog is 100%.

Group of orthologs #22. Best score 394 bits
Score difference with first non-orthologous sequence - P.jiroveci:394 T.maritima:394

L0PBR9              	100.00%		Q9X1Y8              	100.00%
Bootstrap support for L0PBR9 as seed ortholog is 100%.
Bootstrap support for Q9X1Y8 as seed ortholog is 100%.

Group of orthologs #23. Best score 379 bits
Score difference with first non-orthologous sequence - P.jiroveci:379 T.maritima:309

L0PAS8              	100.00%		Q9WXZ5              	100.00%
Bootstrap support for L0PAS8 as seed ortholog is 100%.
Bootstrap support for Q9WXZ5 as seed ortholog is 100%.

Group of orthologs #24. Best score 350 bits
Score difference with first non-orthologous sequence - P.jiroveci:350 T.maritima:350

L0PCX1              	100.00%		Q9WZH9              	100.00%
Bootstrap support for L0PCX1 as seed ortholog is 100%.
Bootstrap support for Q9WZH9 as seed ortholog is 100%.

Group of orthologs #25. Best score 338 bits
Score difference with first non-orthologous sequence - P.jiroveci:196 T.maritima:338

L0P8W4              	100.00%		Q9X1F4              	100.00%
Bootstrap support for L0P8W4 as seed ortholog is 99%.
Bootstrap support for Q9X1F4 as seed ortholog is 100%.

Group of orthologs #26. Best score 334 bits
Score difference with first non-orthologous sequence - P.jiroveci:182 T.maritima:334

L0PGH3              	100.00%		Q9WYF3              	100.00%
Bootstrap support for L0PGH3 as seed ortholog is 99%.
Bootstrap support for Q9WYF3 as seed ortholog is 100%.

Group of orthologs #27. Best score 332 bits
Score difference with first non-orthologous sequence - P.jiroveci:332 T.maritima:332

L0PA88              	100.00%		O33925              	100.00%
Bootstrap support for L0PA88 as seed ortholog is 100%.
Bootstrap support for O33925 as seed ortholog is 100%.

Group of orthologs #28. Best score 330 bits
Score difference with first non-orthologous sequence - P.jiroveci:330 T.maritima:330

L0P971              	100.00%		Q9WY70              	100.00%
                    	       		Q9WXM5              	31.27%
                    	       		G4FFG0              	19.97%
Bootstrap support for L0P971 as seed ortholog is 100%.
Bootstrap support for Q9WY70 as seed ortholog is 100%.

Group of orthologs #29. Best score 327 bits
Score difference with first non-orthologous sequence - P.jiroveci:327 T.maritima:327

L0P7N3              	100.00%		Q9X168              	100.00%
Bootstrap support for L0P7N3 as seed ortholog is 100%.
Bootstrap support for Q9X168 as seed ortholog is 100%.

Group of orthologs #30. Best score 320 bits
Score difference with first non-orthologous sequence - P.jiroveci:320 T.maritima:320

L0PB90              	100.00%		P36252              	100.00%
L0PB43              	13.83%		
Bootstrap support for L0PB90 as seed ortholog is 100%.
Bootstrap support for P36252 as seed ortholog is 100%.

Group of orthologs #31. Best score 315 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 T.maritima:315

L0PIP5              	100.00%		P74926              	100.00%
Bootstrap support for L0PIP5 as seed ortholog is 93%.
Bootstrap support for P74926 as seed ortholog is 100%.

Group of orthologs #32. Best score 311 bits
Score difference with first non-orthologous sequence - P.jiroveci:311 T.maritima:311

L0PG48              	100.00%		Q9X0N9              	100.00%
Bootstrap support for L0PG48 as seed ortholog is 100%.
Bootstrap support for Q9X0N9 as seed ortholog is 100%.

Group of orthologs #33. Best score 309 bits
Score difference with first non-orthologous sequence - P.jiroveci:309 T.maritima:239

L0P7Y5              	100.00%		Q9WYL2              	100.00%
Bootstrap support for L0P7Y5 as seed ortholog is 100%.
Bootstrap support for Q9WYL2 as seed ortholog is 100%.

Group of orthologs #34. Best score 307 bits
Score difference with first non-orthologous sequence - P.jiroveci:42 T.maritima:307

L0PGL8              	100.00%		Q9X0R4              	100.00%
Bootstrap support for L0PGL8 as seed ortholog is 70%.
Alternative seed ortholog is L0PC93 (42 bits away from this cluster)
Bootstrap support for Q9X0R4 as seed ortholog is 100%.

Group of orthologs #35. Best score 305 bits
Score difference with first non-orthologous sequence - P.jiroveci:249 T.maritima:305

L0PDV1              	100.00%		Q9X172              	100.00%
                    	       		Q9X2I8              	16.54%
Bootstrap support for L0PDV1 as seed ortholog is 100%.
Bootstrap support for Q9X172 as seed ortholog is 100%.

Group of orthologs #36. Best score 285 bits
Score difference with first non-orthologous sequence - P.jiroveci:285 T.maritima:79

L0P9A8              	100.00%		Q9WYC4              	100.00%
L0PHB9              	100.00%		
Bootstrap support for L0P9A8 as seed ortholog is 100%.
Bootstrap support for L0PHB9 as seed ortholog is 100%.
Bootstrap support for Q9WYC4 as seed ortholog is 95%.

Group of orthologs #37. Best score 284 bits
Score difference with first non-orthologous sequence - P.jiroveci:284 T.maritima:284

L0PEX5              	100.00%		Q9WZQ9              	100.00%
Bootstrap support for L0PEX5 as seed ortholog is 100%.
Bootstrap support for Q9WZQ9 as seed ortholog is 100%.

Group of orthologs #38. Best score 282 bits
Score difference with first non-orthologous sequence - P.jiroveci:282 T.maritima:282

L0PC44              	100.00%		Q9WZH8              	100.00%
Bootstrap support for L0PC44 as seed ortholog is 100%.
Bootstrap support for Q9WZH8 as seed ortholog is 100%.

Group of orthologs #39. Best score 277 bits
Score difference with first non-orthologous sequence - P.jiroveci:277 T.maritima:277

L0PDJ1              	100.00%		O51933              	100.00%
Bootstrap support for L0PDJ1 as seed ortholog is 100%.
Bootstrap support for O51933 as seed ortholog is 100%.

Group of orthologs #40. Best score 272 bits
Score difference with first non-orthologous sequence - P.jiroveci:272 T.maritima:272

L0PDU5              	100.00%		Q9WYS8              	100.00%
Bootstrap support for L0PDU5 as seed ortholog is 100%.
Bootstrap support for Q9WYS8 as seed ortholog is 100%.

Group of orthologs #41. Best score 271 bits
Score difference with first non-orthologous sequence - P.jiroveci:271 T.maritima:271

L0P7Z6              	100.00%		Q9X1P7              	100.00%
Bootstrap support for L0P7Z6 as seed ortholog is 100%.
Bootstrap support for Q9X1P7 as seed ortholog is 100%.

Group of orthologs #42. Best score 270 bits
Score difference with first non-orthologous sequence - P.jiroveci:270 T.maritima:270

L0PGV2              	100.00%		Q9X100              	100.00%
L0PG40              	60.52%		
Bootstrap support for L0PGV2 as seed ortholog is 100%.
Bootstrap support for Q9X100 as seed ortholog is 100%.

Group of orthologs #43. Best score 269 bits
Score difference with first non-orthologous sequence - P.jiroveci:269 T.maritima:269

L0PDI1              	100.00%		Q9WYX8              	100.00%
Bootstrap support for L0PDI1 as seed ortholog is 100%.
Bootstrap support for Q9WYX8 as seed ortholog is 100%.

Group of orthologs #44. Best score 255 bits
Score difference with first non-orthologous sequence - P.jiroveci:255 T.maritima:174

L0P6Y2              	100.00%		Q9X218              	100.00%
Bootstrap support for L0P6Y2 as seed ortholog is 100%.
Bootstrap support for Q9X218 as seed ortholog is 99%.

Group of orthologs #45. Best score 251 bits
Score difference with first non-orthologous sequence - P.jiroveci:251 T.maritima:251

L0PFY1              	100.00%		Q9X0I1              	100.00%
Bootstrap support for L0PFY1 as seed ortholog is 100%.
Bootstrap support for Q9X0I1 as seed ortholog is 100%.

Group of orthologs #46. Best score 239 bits
Score difference with first non-orthologous sequence - P.jiroveci:239 T.maritima:239

L0PG77              	100.00%		P29398              	100.00%
L0P9P7              	9.32%		
Bootstrap support for L0PG77 as seed ortholog is 100%.
Bootstrap support for P29398 as seed ortholog is 100%.

Group of orthologs #47. Best score 238 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 T.maritima:238

L0P6V9              	100.00%		Q9X1W3              	100.00%
L0PBF0              	9.15%		
Bootstrap support for L0P6V9 as seed ortholog is 99%.
Bootstrap support for Q9X1W3 as seed ortholog is 100%.

Group of orthologs #48. Best score 237 bits
Score difference with first non-orthologous sequence - P.jiroveci:33 T.maritima:237

L0PAU1              	100.00%		Q9X199              	100.00%
Bootstrap support for L0PAU1 as seed ortholog is 80%.
Bootstrap support for Q9X199 as seed ortholog is 100%.

Group of orthologs #49. Best score 236 bits
Score difference with first non-orthologous sequence - P.jiroveci:236 T.maritima:236

L0PE57              	100.00%		Q9X0X7              	100.00%
Bootstrap support for L0PE57 as seed ortholog is 100%.
Bootstrap support for Q9X0X7 as seed ortholog is 100%.

Group of orthologs #50. Best score 229 bits
Score difference with first non-orthologous sequence - P.jiroveci:229 T.maritima:229

L0PAT1              	100.00%		Q9WZV6              	100.00%
Bootstrap support for L0PAT1 as seed ortholog is 100%.
Bootstrap support for Q9WZV6 as seed ortholog is 100%.

Group of orthologs #51. Best score 228 bits
Score difference with first non-orthologous sequence - P.jiroveci:228 T.maritima:228

L0PES7              	100.00%		Q9WYS5              	100.00%
Bootstrap support for L0PES7 as seed ortholog is 100%.
Bootstrap support for Q9WYS5 as seed ortholog is 100%.

Group of orthologs #52. Best score 227 bits
Score difference with first non-orthologous sequence - P.jiroveci:227 T.maritima:227

L0PG02              	100.00%		Q9WZ28              	100.00%
Bootstrap support for L0PG02 as seed ortholog is 100%.
Bootstrap support for Q9WZ28 as seed ortholog is 100%.

Group of orthologs #53. Best score 225 bits
Score difference with first non-orthologous sequence - P.jiroveci:225 T.maritima:225

L0PF83              	100.00%		Q9WY54              	100.00%
Bootstrap support for L0PF83 as seed ortholog is 100%.
Bootstrap support for Q9WY54 as seed ortholog is 100%.

Group of orthologs #54. Best score 224 bits
Score difference with first non-orthologous sequence - P.jiroveci:224 T.maritima:224

L0PEE3              	100.00%		Q9WY51              	100.00%
Bootstrap support for L0PEE3 as seed ortholog is 100%.
Bootstrap support for Q9WY51 as seed ortholog is 100%.

Group of orthologs #55. Best score 216 bits
Score difference with first non-orthologous sequence - P.jiroveci:216 T.maritima:216

L0PBY9              	100.00%		Q9WYY4              	100.00%
Bootstrap support for L0PBY9 as seed ortholog is 100%.
Bootstrap support for Q9WYY4 as seed ortholog is 100%.

Group of orthologs #56. Best score 214 bits
Score difference with first non-orthologous sequence - P.jiroveci:214 T.maritima:214

L0PB96              	100.00%		Q9X0U3              	100.00%
Bootstrap support for L0PB96 as seed ortholog is 100%.
Bootstrap support for Q9X0U3 as seed ortholog is 100%.

Group of orthologs #57. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:212 T.maritima:73

L0PFN9              	100.00%		Q9X1Q1              	100.00%
L0PEF0              	32.11%		
Bootstrap support for L0PFN9 as seed ortholog is 100%.
Bootstrap support for Q9X1Q1 as seed ortholog is 98%.

Group of orthologs #58. Best score 209 bits
Score difference with first non-orthologous sequence - P.jiroveci:209 T.maritima:24

L0PA23              	100.00%		Q9WZY4              	100.00%
Bootstrap support for L0PA23 as seed ortholog is 100%.
Bootstrap support for Q9WZY4 as seed ortholog is 69%.
Alternative seed ortholog is Q9X0Z7 (24 bits away from this cluster)

Group of orthologs #59. Best score 205 bits
Score difference with first non-orthologous sequence - P.jiroveci:205 T.maritima:205

L0PG43              	100.00%		Q9WYA4              	100.00%
Bootstrap support for L0PG43 as seed ortholog is 100%.
Bootstrap support for Q9WYA4 as seed ortholog is 100%.

Group of orthologs #60. Best score 198 bits
Score difference with first non-orthologous sequence - P.jiroveci:198 T.maritima:198

L0PGW6              	100.00%		Q9X183              	100.00%
                    	       		Q9X1R5              	14.77%
Bootstrap support for L0PGW6 as seed ortholog is 100%.
Bootstrap support for Q9X183 as seed ortholog is 100%.

Group of orthologs #61. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:193 T.maritima:193

L0PBN0              	100.00%		Q9X0X6              	100.00%
Bootstrap support for L0PBN0 as seed ortholog is 100%.
Bootstrap support for Q9X0X6 as seed ortholog is 100%.

Group of orthologs #62. Best score 190 bits
Score difference with first non-orthologous sequence - P.jiroveci:190 T.maritima:190

L0PC37              	100.00%		Q9WZI1              	100.00%
Bootstrap support for L0PC37 as seed ortholog is 100%.
Bootstrap support for Q9WZI1 as seed ortholog is 100%.

Group of orthologs #63. Best score 185 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 T.maritima:185

L0PEA3              	100.00%		P38510              	100.00%
Bootstrap support for L0PEA3 as seed ortholog is 99%.
Bootstrap support for P38510 as seed ortholog is 100%.

Group of orthologs #64. Best score 181 bits
Score difference with first non-orthologous sequence - P.jiroveci:32 T.maritima:181

L0PG51              	100.00%		Q9WZV3              	100.00%
Bootstrap support for L0PG51 as seed ortholog is 83%.
Bootstrap support for Q9WZV3 as seed ortholog is 100%.

Group of orthologs #65. Best score 173 bits
Score difference with first non-orthologous sequence - P.jiroveci:40 T.maritima:173

L0PF87              	100.00%		Q9WY13              	100.00%
Bootstrap support for L0PF87 as seed ortholog is 81%.
Bootstrap support for Q9WY13 as seed ortholog is 100%.

Group of orthologs #66. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 T.maritima:103

L0PDF2              	100.00%		Q9WZX0              	100.00%
Bootstrap support for L0PDF2 as seed ortholog is 99%.
Bootstrap support for Q9WZX0 as seed ortholog is 99%.

Group of orthologs #67. Best score 170 bits
Score difference with first non-orthologous sequence - P.jiroveci:6 T.maritima:101

L0PG10              	100.00%		Q9X1S9              	100.00%
Bootstrap support for L0PG10 as seed ortholog is 50%.
Alternative seed ortholog is L0P9R7 (6 bits away from this cluster)
Bootstrap support for Q9X1S9 as seed ortholog is 99%.

Group of orthologs #68. Best score 164 bits
Score difference with first non-orthologous sequence - P.jiroveci:164 T.maritima:164

L0PC06              	100.00%		Q9WZF9              	100.00%
Bootstrap support for L0PC06 as seed ortholog is 100%.
Bootstrap support for Q9WZF9 as seed ortholog is 100%.

Group of orthologs #69. Best score 162 bits
Score difference with first non-orthologous sequence - P.jiroveci:162 T.maritima:162

L0PBY6              	100.00%		G4FH33              	100.00%
Bootstrap support for L0PBY6 as seed ortholog is 100%.
Bootstrap support for G4FH33 as seed ortholog is 100%.

Group of orthologs #70. Best score 162 bits
Score difference with first non-orthologous sequence - P.jiroveci:162 T.maritima:162

L0PEA1              	100.00%		Q9X0Z9              	100.00%
Bootstrap support for L0PEA1 as seed ortholog is 100%.
Bootstrap support for Q9X0Z9 as seed ortholog is 100%.

Group of orthologs #71. Best score 158 bits
Score difference with first non-orthologous sequence - P.jiroveci:158 T.maritima:158

L0PGV5              	100.00%		O33833              	100.00%
Bootstrap support for L0PGV5 as seed ortholog is 100%.
Bootstrap support for O33833 as seed ortholog is 100%.

Group of orthologs #72. Best score 156 bits
Score difference with first non-orthologous sequence - P.jiroveci:156 T.maritima:156

L0P7B5              	100.00%		Q9X288              	100.00%
Bootstrap support for L0P7B5 as seed ortholog is 100%.
Bootstrap support for Q9X288 as seed ortholog is 100%.

Group of orthologs #73. Best score 156 bits
Score difference with first non-orthologous sequence - P.jiroveci:156 T.maritima:156

L0PG33              	100.00%		Q08653              	100.00%
Bootstrap support for L0PG33 as seed ortholog is 100%.
Bootstrap support for Q08653 as seed ortholog is 100%.

Group of orthologs #74. Best score 156 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 T.maritima:156

L0PG96              	100.00%		P74925              	100.00%
Bootstrap support for L0PG96 as seed ortholog is 85%.
Bootstrap support for P74925 as seed ortholog is 100%.

Group of orthologs #75. Best score 154 bits
Score difference with first non-orthologous sequence - P.jiroveci:154 T.maritima:154

L0PEZ4              	100.00%		P38515              	100.00%
Bootstrap support for L0PEZ4 as seed ortholog is 100%.
Bootstrap support for P38515 as seed ortholog is 100%.

Group of orthologs #76. Best score 154 bits
Score difference with first non-orthologous sequence - P.jiroveci:154 T.maritima:154

L0PHL5              	100.00%		Q9WYI2              	100.00%
Bootstrap support for L0PHL5 as seed ortholog is 100%.
Bootstrap support for Q9WYI2 as seed ortholog is 100%.

Group of orthologs #77. Best score 153 bits
Score difference with first non-orthologous sequence - P.jiroveci:153 T.maritima:153

L0PCQ8              	100.00%		Q9WZ26              	100.00%
L0PB68              	29.08%		
Bootstrap support for L0PCQ8 as seed ortholog is 100%.
Bootstrap support for Q9WZ26 as seed ortholog is 100%.

Group of orthologs #78. Best score 152 bits
Score difference with first non-orthologous sequence - P.jiroveci:152 T.maritima:152

L0PFN4              	100.00%		Q9WZ24              	100.00%
                    	       		Q9WYC7              	39.25%
Bootstrap support for L0PFN4 as seed ortholog is 100%.
Bootstrap support for Q9WZ24 as seed ortholog is 100%.

Group of orthologs #79. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 T.maritima:151

L0PH89              	100.00%		Q9WY61              	100.00%
Bootstrap support for L0PH89 as seed ortholog is 97%.
Bootstrap support for Q9WY61 as seed ortholog is 100%.

Group of orthologs #80. Best score 150 bits
Score difference with first non-orthologous sequence - P.jiroveci:150 T.maritima:150

L0PBE8              	100.00%		Q9X243              	100.00%
Bootstrap support for L0PBE8 as seed ortholog is 100%.
Bootstrap support for Q9X243 as seed ortholog is 100%.

Group of orthologs #81. Best score 150 bits
Score difference with first non-orthologous sequence - P.jiroveci:150 T.maritima:150

L0PG19              	100.00%		Q9WYE4              	100.00%
Bootstrap support for L0PG19 as seed ortholog is 100%.
Bootstrap support for Q9WYE4 as seed ortholog is 100%.

Group of orthologs #82. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 T.maritima:148

L0PEP7              	100.00%		Q9WZN3              	100.00%
Bootstrap support for L0PEP7 as seed ortholog is 100%.
Bootstrap support for Q9WZN3 as seed ortholog is 100%.

Group of orthologs #83. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 T.maritima:146

L0PEX1              	100.00%		Q9X1I8              	100.00%
Bootstrap support for L0PEX1 as seed ortholog is 99%.
Bootstrap support for Q9X1I8 as seed ortholog is 100%.

Group of orthologs #84. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 T.maritima:144

L0PFX9              	100.00%		Q9X1X8              	100.00%
Bootstrap support for L0PFX9 as seed ortholog is 100%.
Bootstrap support for Q9X1X8 as seed ortholog is 100%.

Group of orthologs #85. Best score 141 bits
Score difference with first non-orthologous sequence - P.jiroveci:141 T.maritima:141

L0PAG8              	100.00%		Q9WYW2              	100.00%
Bootstrap support for L0PAG8 as seed ortholog is 100%.
Bootstrap support for Q9WYW2 as seed ortholog is 100%.

Group of orthologs #86. Best score 139 bits
Score difference with first non-orthologous sequence - P.jiroveci:63 T.maritima:50

L0P903              	100.00%		Q9X248              	100.00%
                    	       		Q9WYG0              	12.09%
                    	       		Q9WYD3              	5.01%
Bootstrap support for L0P903 as seed ortholog is 97%.
Bootstrap support for Q9X248 as seed ortholog is 93%.

Group of orthologs #87. Best score 138 bits
Score difference with first non-orthologous sequence - P.jiroveci:138 T.maritima:138

L0P9P0              	100.00%		Q9X0W7              	100.00%
Bootstrap support for L0P9P0 as seed ortholog is 100%.
Bootstrap support for Q9X0W7 as seed ortholog is 100%.

Group of orthologs #88. Best score 136 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 T.maritima:136

L0PFI7              	100.00%		Q9WZW0              	100.00%
Bootstrap support for L0PFI7 as seed ortholog is 94%.
Bootstrap support for Q9WZW0 as seed ortholog is 100%.

Group of orthologs #89. Best score 135 bits
Score difference with first non-orthologous sequence - P.jiroveci:135 T.maritima:135

L0PCW8              	100.00%		Q9X0H8              	100.00%
Bootstrap support for L0PCW8 as seed ortholog is 100%.
Bootstrap support for Q9X0H8 as seed ortholog is 100%.

Group of orthologs #90. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 T.maritima:131

L0PFS1              	100.00%		Q9X1B8              	100.00%
Bootstrap support for L0PFS1 as seed ortholog is 100%.
Bootstrap support for Q9X1B8 as seed ortholog is 100%.

Group of orthologs #91. Best score 126 bits
Score difference with first non-orthologous sequence - P.jiroveci:126 T.maritima:126

L0P8G8              	100.00%		Q9X1F1              	100.00%
Bootstrap support for L0P8G8 as seed ortholog is 100%.
Bootstrap support for Q9X1F1 as seed ortholog is 100%.

Group of orthologs #92. Best score 125 bits
Score difference with first non-orthologous sequence - P.jiroveci:125 T.maritima:125

L0PCZ5              	100.00%		P29395              	100.00%
Bootstrap support for L0PCZ5 as seed ortholog is 100%.
Bootstrap support for P29395 as seed ortholog is 100%.

Group of orthologs #93. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:17 T.maritima:124

L0PER3              	100.00%		Q9WZS8              	100.00%
Bootstrap support for L0PER3 as seed ortholog is 64%.
Alternative seed ortholog is L0P7R5 (17 bits away from this cluster)
Bootstrap support for Q9WZS8 as seed ortholog is 100%.

Group of orthologs #94. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 T.maritima:122

L0PBL5              	100.00%		Q9X264              	100.00%
Bootstrap support for L0PBL5 as seed ortholog is 100%.
Bootstrap support for Q9X264 as seed ortholog is 100%.

Group of orthologs #95. Best score 120 bits
Score difference with first non-orthologous sequence - P.jiroveci:120 T.maritima:65

L0P8J0              	100.00%		Q9WYK0              	100.00%
Bootstrap support for L0P8J0 as seed ortholog is 100%.
Bootstrap support for Q9WYK0 as seed ortholog is 99%.

Group of orthologs #96. Best score 120 bits
Score difference with first non-orthologous sequence - P.jiroveci:63 T.maritima:120

L0P8A1              	100.00%		Q9X1J3              	100.00%
Bootstrap support for L0P8A1 as seed ortholog is 99%.
Bootstrap support for Q9X1J3 as seed ortholog is 100%.

Group of orthologs #97. Best score 120 bits
Score difference with first non-orthologous sequence - P.jiroveci:120 T.maritima:120

L0PFT7              	100.00%		Q9X0I0              	100.00%
Bootstrap support for L0PFT7 as seed ortholog is 100%.
Bootstrap support for Q9X0I0 as seed ortholog is 100%.

Group of orthologs #98. Best score 116 bits
Score difference with first non-orthologous sequence - P.jiroveci:116 T.maritima:116

L0P8R6              	100.00%		P46799              	100.00%
                    	       		O51934              	7.25%
Bootstrap support for L0P8R6 as seed ortholog is 100%.
Bootstrap support for P46799 as seed ortholog is 100%.

Group of orthologs #99. Best score 116 bits
Score difference with first non-orthologous sequence - P.jiroveci:116 T.maritima:116

L0P8T2              	100.00%		Q9X1J0              	100.00%
L0PA19              	80.97%		
Bootstrap support for L0P8T2 as seed ortholog is 100%.
Bootstrap support for Q9X1J0 as seed ortholog is 100%.

Group of orthologs #100. Best score 116 bits
Score difference with first non-orthologous sequence - P.jiroveci:116 T.maritima:116

L0PF66              	100.00%		Q9X283              	100.00%
Bootstrap support for L0PF66 as seed ortholog is 100%.
Bootstrap support for Q9X283 as seed ortholog is 100%.

Group of orthologs #101. Best score 115 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 T.maritima:115

L0PFQ6              	100.00%		Q9WZM1              	100.00%
Bootstrap support for L0PFQ6 as seed ortholog is 97%.
Bootstrap support for Q9WZM1 as seed ortholog is 100%.

Group of orthologs #102. Best score 113 bits
Score difference with first non-orthologous sequence - P.jiroveci:36 T.maritima:113

L0P905              	100.00%		Q9WXX0              	100.00%
                    	       		Q9X051              	37.81%
                    	       		Q9WXV8              	25.06%
Bootstrap support for L0P905 as seed ortholog is 70%.
Alternative seed ortholog is L0PDF1 (36 bits away from this cluster)
Bootstrap support for Q9WXX0 as seed ortholog is 100%.

Group of orthologs #103. Best score 108 bits
Score difference with first non-orthologous sequence - P.jiroveci:108 T.maritima:108

L0P7L7              	100.00%		Q9WY40              	100.00%
Bootstrap support for L0P7L7 as seed ortholog is 100%.
Bootstrap support for Q9WY40 as seed ortholog is 100%.

Group of orthologs #104. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 T.maritima:107

L0PGL4              	100.00%		Q9X085              	100.00%
L0P7Q7              	47.43%		
L0PB83              	14.96%		
L0PG21              	13.37%		
L0P850              	12.08%		
L0P718              	8.78%		
L0P8Y6              	6.90%		
L0PE26              	5.22%		
Bootstrap support for L0PGL4 as seed ortholog is 100%.
Bootstrap support for Q9X085 as seed ortholog is 100%.

Group of orthologs #105. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 T.maritima:104

L0PDL8              	100.00%		Q9WYZ0              	100.00%
L0PD52              	91.79%		
Bootstrap support for L0PDL8 as seed ortholog is 100%.
Bootstrap support for Q9WYZ0 as seed ortholog is 100%.

Group of orthologs #106. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 T.maritima:104

L0P9I6              	100.00%		Q9WYJ7              	100.00%
Bootstrap support for L0P9I6 as seed ortholog is 100%.
Bootstrap support for Q9WYJ7 as seed ortholog is 100%.

Group of orthologs #107. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:30 T.maritima:104

L0PFK9              	100.00%		Q9WYW0              	100.00%
Bootstrap support for L0PFK9 as seed ortholog is 74%.
Alternative seed ortholog is L0PAA5 (30 bits away from this cluster)
Bootstrap support for Q9WYW0 as seed ortholog is 100%.

Group of orthologs #108. Best score 103 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 T.maritima:103

L0PDS8              	100.00%		Q9X1G5              	100.00%
Bootstrap support for L0PDS8 as seed ortholog is 100%.
Bootstrap support for Q9X1G5 as seed ortholog is 100%.

Group of orthologs #109. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:49 T.maritima:102

L0PBK3              	100.00%		P38517              	100.00%
Bootstrap support for L0PBK3 as seed ortholog is 97%.
Bootstrap support for P38517 as seed ortholog is 100%.

Group of orthologs #110. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:25 T.maritima:102

L0PCV1              	100.00%		Q9WXV1              	100.00%
Bootstrap support for L0PCV1 as seed ortholog is 77%.
Bootstrap support for Q9WXV1 as seed ortholog is 100%.

Group of orthologs #111. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 T.maritima:101

L0PFQ3              	100.00%		Q9WZD5              	100.00%
Bootstrap support for L0PFQ3 as seed ortholog is 100%.
Bootstrap support for Q9WZD5 as seed ortholog is 100%.

Group of orthologs #112. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 T.maritima:99

L0P8P8              	100.00%		Q9X1A5              	100.00%
Bootstrap support for L0P8P8 as seed ortholog is 100%.
Bootstrap support for Q9X1A5 as seed ortholog is 100%.

Group of orthologs #113. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 T.maritima:99

L0PCY5              	100.00%		Q9X0H5              	100.00%
Bootstrap support for L0PCY5 as seed ortholog is 100%.
Bootstrap support for Q9X0H5 as seed ortholog is 100%.

Group of orthologs #114. Best score 95 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 T.maritima:95

L0P9P8              	100.00%		Q9X0W5              	100.00%
Bootstrap support for L0P9P8 as seed ortholog is 100%.
Bootstrap support for Q9X0W5 as seed ortholog is 100%.

Group of orthologs #115. Best score 95 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 T.maritima:95

L0P8Y0              	100.00%		Q9X253              	100.00%
Bootstrap support for L0P8Y0 as seed ortholog is 100%.
Bootstrap support for Q9X253 as seed ortholog is 100%.

Group of orthologs #116. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 T.maritima:94

L0P9H8              	100.00%		Q56320              	100.00%
Bootstrap support for L0P9H8 as seed ortholog is 100%.
Bootstrap support for Q56320 as seed ortholog is 100%.

Group of orthologs #117. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 T.maritima:94

L0P957              	100.00%		Q9X1I7              	100.00%
Bootstrap support for L0P957 as seed ortholog is 100%.
Bootstrap support for Q9X1I7 as seed ortholog is 100%.

Group of orthologs #118. Best score 93 bits
Score difference with first non-orthologous sequence - P.jiroveci:93 T.maritima:93

L0PDR3              	100.00%		Q9WYC6              	100.00%
Bootstrap support for L0PDR3 as seed ortholog is 100%.
Bootstrap support for Q9WYC6 as seed ortholog is 100%.

Group of orthologs #119. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 T.maritima:92

L0PIR9              	100.00%		Q9WXZ2              	100.00%
Bootstrap support for L0PIR9 as seed ortholog is 100%.
Bootstrap support for Q9WXZ2 as seed ortholog is 100%.

Group of orthologs #120. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 T.maritima:91

L0PCU7              	100.00%		Q9X0X5              	100.00%
Bootstrap support for L0PCU7 as seed ortholog is 100%.
Bootstrap support for Q9X0X5 as seed ortholog is 100%.

Group of orthologs #121. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 T.maritima:91

L0PFH7              	100.00%		Q9WZK7              	100.00%
Bootstrap support for L0PFH7 as seed ortholog is 100%.
Bootstrap support for Q9WZK7 as seed ortholog is 100%.

Group of orthologs #122. Best score 90 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 T.maritima:90

L0PAW7              	100.00%		Q9X0N8              	100.00%
Bootstrap support for L0PAW7 as seed ortholog is 100%.
Bootstrap support for Q9X0N8 as seed ortholog is 100%.

Group of orthologs #123. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 T.maritima:89

L0PF68              	100.00%		Q9X0Y0              	100.00%
Bootstrap support for L0PF68 as seed ortholog is 100%.
Bootstrap support for Q9X0Y0 as seed ortholog is 100%.

Group of orthologs #124. Best score 88 bits
Score difference with first non-orthologous sequence - P.jiroveci:88 T.maritima:88

L0P891              	100.00%		Q9WZF2              	100.00%
L0PE19              	16.69%		
Bootstrap support for L0P891 as seed ortholog is 100%.
Bootstrap support for Q9WZF2 as seed ortholog is 100%.

Group of orthologs #125. Best score 88 bits
Score difference with first non-orthologous sequence - P.jiroveci:88 T.maritima:88

L0PA21              	100.00%		Q9X1G7              	100.00%
Bootstrap support for L0PA21 as seed ortholog is 100%.
Bootstrap support for Q9X1G7 as seed ortholog is 100%.

Group of orthologs #126. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 T.maritima:87

L0PBU8              	100.00%		Q9WZ08              	100.00%
Bootstrap support for L0PBU8 as seed ortholog is 100%.
Bootstrap support for Q9WZ08 as seed ortholog is 100%.

Group of orthologs #127. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 T.maritima:87

L0PAN5              	100.00%		Q9X215              	100.00%
Bootstrap support for L0PAN5 as seed ortholog is 100%.
Bootstrap support for Q9X215 as seed ortholog is 100%.

Group of orthologs #128. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 T.maritima:86

L0PBL2              	100.00%		Q9X1P2              	100.00%
Bootstrap support for L0PBL2 as seed ortholog is 100%.
Bootstrap support for Q9X1P2 as seed ortholog is 100%.

Group of orthologs #129. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:20 T.maritima:86

L0PEW5              	100.00%		Q9X1R0              	100.00%
Bootstrap support for L0PEW5 as seed ortholog is 75%.
Bootstrap support for Q9X1R0 as seed ortholog is 100%.

Group of orthologs #130. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 T.maritima:30

L0P8N0              	100.00%		Q9WY82              	100.00%
L0PD82              	7.26%		Q9WY81              	26.19%
Bootstrap support for L0P8N0 as seed ortholog is 100%.
Bootstrap support for Q9WY82 as seed ortholog is 76%.

Group of orthologs #131. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:9 T.maritima:84

L0PCN2              	100.00%		Q9WZM6              	100.00%
Bootstrap support for L0PCN2 as seed ortholog is 48%.
Alternative seed ortholog is L0PBB0 (9 bits away from this cluster)
Bootstrap support for Q9WZM6 as seed ortholog is 100%.

Group of orthologs #132. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:26 T.maritima:82

L0P8D1              	100.00%		P38526              	100.00%
Bootstrap support for L0P8D1 as seed ortholog is 72%.
Alternative seed ortholog is L0PFI8 (26 bits away from this cluster)
Bootstrap support for P38526 as seed ortholog is 100%.

Group of orthologs #133. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:18 T.maritima:82

L0PBR8              	100.00%		Q9X1I5              	100.00%
Bootstrap support for L0PBR8 as seed ortholog is 79%.
Bootstrap support for Q9X1I5 as seed ortholog is 100%.

Group of orthologs #134. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 T.maritima:82

L0PFP9              	100.00%		Q9ZAE4              	100.00%
Bootstrap support for L0PFP9 as seed ortholog is 100%.
Bootstrap support for Q9ZAE4 as seed ortholog is 100%.

Group of orthologs #135. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 T.maritima:81

L0PF23              	100.00%		Q9WXP9              	100.00%
Bootstrap support for L0PF23 as seed ortholog is 100%.
Bootstrap support for Q9WXP9 as seed ortholog is 100%.

Group of orthologs #136. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 T.maritima:79

L0PC89              	100.00%		Q9X219              	100.00%
Bootstrap support for L0PC89 as seed ortholog is 100%.
Bootstrap support for Q9X219 as seed ortholog is 100%.

Group of orthologs #137. Best score 77 bits
Score difference with first non-orthologous sequence - P.jiroveci:77 T.maritima:77

L0P8C9              	100.00%		Q9X1U6              	100.00%
Bootstrap support for L0P8C9 as seed ortholog is 100%.
Bootstrap support for Q9X1U6 as seed ortholog is 100%.

Group of orthologs #138. Best score 77 bits
Score difference with first non-orthologous sequence - P.jiroveci:77 T.maritima:77

L0PEU3              	100.00%		Q9WYB0              	100.00%
Bootstrap support for L0PEU3 as seed ortholog is 100%.
Bootstrap support for Q9WYB0 as seed ortholog is 100%.

Group of orthologs #139. Best score 77 bits
Score difference with first non-orthologous sequence - P.jiroveci:77 T.maritima:77

L0PBL4              	100.00%		Q9X2E5              	100.00%
Bootstrap support for L0PBL4 as seed ortholog is 100%.
Bootstrap support for Q9X2E5 as seed ortholog is 100%.

Group of orthologs #140. Best score 75 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 T.maritima:75

L0P8C5              	100.00%		P29393              	100.00%
L0P7X3              	59.88%		
Bootstrap support for L0P8C5 as seed ortholog is 100%.
Bootstrap support for P29393 as seed ortholog is 100%.

Group of orthologs #141. Best score 75 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 T.maritima:75

L0PGY1              	100.00%		Q9X0I6              	100.00%
Bootstrap support for L0PGY1 as seed ortholog is 100%.
Bootstrap support for Q9X0I6 as seed ortholog is 100%.

Group of orthologs #142. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:11 T.maritima:72

L0P7Z7              	100.00%		Q9X2G1              	100.00%
L0PA57              	100.00%		
L0PDA0              	9.22%		
Bootstrap support for L0P7Z7 as seed ortholog is 54%.
Alternative seed ortholog is L0PGN9 (11 bits away from this cluster)
Bootstrap support for L0PA57 as seed ortholog is 60%.
Alternative seed ortholog is L0PGN9 (11 bits away from this cluster)
Bootstrap support for Q9X2G1 as seed ortholog is 100%.

Group of orthologs #143. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 T.maritima:71

L0P852              	100.00%		Q9WYT3              	100.00%
                    	       		Q9X038              	18.92%
Bootstrap support for L0P852 as seed ortholog is 100%.
Bootstrap support for Q9WYT3 as seed ortholog is 100%.

Group of orthologs #144. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 T.maritima:71

L0PE61              	100.00%		P16115              	100.00%
Bootstrap support for L0PE61 as seed ortholog is 100%.
Bootstrap support for P16115 as seed ortholog is 100%.

Group of orthologs #145. Best score 70 bits
Score difference with first non-orthologous sequence - P.jiroveci:10 T.maritima:4

L0P6Z2              	100.00%		Q9WYM0              	100.00%
                    	       		Q9X1C3              	26.32%
                    	       		Q9X0B8              	16.54%
                    	       		Q9WZM4              	14.10%
                    	       		Q9WZQ0              	13.35%
                    	       		Q9WYQ2              	11.65%
                    	       		Q9WZ60              	10.53%
                    	       		Q9X196              	10.34%
                    	       		Q9WZ14              	9.59%
                    	       		Q9X1X3              	8.27%
                    	       		Q9X0E4              	7.89%
                    	       		Q9X0M3              	7.89%
                    	       		Q9X0V9              	7.71%
                    	       		Q9WYV3              	6.95%
                    	       		Q9X128              	6.95%
                    	       		Q9WY65              	6.39%
                    	       		Q9WY34              	6.20%
                    	       		Q9X103              	6.02%
Bootstrap support for L0P6Z2 as seed ortholog is 63%.
Alternative seed ortholog is L0PCR9 (10 bits away from this cluster)
Bootstrap support for Q9WYM0 as seed ortholog is 56%.
Alternative seed ortholog is Q9WYD9 (4 bits away from this cluster)

Group of orthologs #146. Best score 70 bits
Score difference with first non-orthologous sequence - P.jiroveci:70 T.maritima:70

L0P875              	100.00%		P38509              	100.00%
Bootstrap support for L0P875 as seed ortholog is 100%.
Bootstrap support for P38509 as seed ortholog is 100%.

Group of orthologs #147. Best score 70 bits
Score difference with first non-orthologous sequence - P.jiroveci:70 T.maritima:70

L0PAS5              	100.00%		Q9X0Y1              	100.00%
Bootstrap support for L0PAS5 as seed ortholog is 100%.
Bootstrap support for Q9X0Y1 as seed ortholog is 100%.

Group of orthologs #148. Best score 69 bits
Score difference with first non-orthologous sequence - P.jiroveci:7 T.maritima:69

L0P9C9              	100.00%		Q9WZM7              	100.00%
Bootstrap support for L0P9C9 as seed ortholog is 50%.
Alternative seed ortholog is L0PEE4 (7 bits away from this cluster)
Bootstrap support for Q9WZM7 as seed ortholog is 100%.

Group of orthologs #149. Best score 69 bits
Score difference with first non-orthologous sequence - P.jiroveci:69 T.maritima:69

L0PF49              	100.00%		Q9WZK3              	100.00%
Bootstrap support for L0PF49 as seed ortholog is 100%.
Bootstrap support for Q9WZK3 as seed ortholog is 100%.

Group of orthologs #150. Best score 69 bits
Score difference with first non-orthologous sequence - P.jiroveci:69 T.maritima:69

L0PEY1              	100.00%		Q9X1H7              	100.00%
Bootstrap support for L0PEY1 as seed ortholog is 100%.
Bootstrap support for Q9X1H7 as seed ortholog is 100%.

Group of orthologs #151. Best score 68 bits
Score difference with first non-orthologous sequence - P.jiroveci:68 T.maritima:68

L0PD91              	100.00%		Q9WYX5              	100.00%
Bootstrap support for L0PD91 as seed ortholog is 100%.
Bootstrap support for Q9WYX5 as seed ortholog is 100%.

Group of orthologs #152. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 T.maritima:7

L0P834              	100.00%		Q9X013              	100.00%
Bootstrap support for L0P834 as seed ortholog is 100%.
Bootstrap support for Q9X013 as seed ortholog is 60%.
Alternative seed ortholog is Q9X1F3 (7 bits away from this cluster)

Group of orthologs #153. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 T.maritima:64

L0PEZ2              	100.00%		Q9WYD1              	100.00%
L0PH30              	100.00%		
Bootstrap support for L0PEZ2 as seed ortholog is 100%.
Bootstrap support for L0PH30 as seed ortholog is 100%.
Bootstrap support for Q9WYD1 as seed ortholog is 100%.

Group of orthologs #154. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 T.maritima:64

L0PBX7              	100.00%		P38519              	100.00%
Bootstrap support for L0PBX7 as seed ortholog is 100%.
Bootstrap support for P38519 as seed ortholog is 100%.

Group of orthologs #155. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 T.maritima:64

L0PBS4              	100.00%		Q9X1I3              	100.00%
Bootstrap support for L0PBS4 as seed ortholog is 100%.
Bootstrap support for Q9X1I3 as seed ortholog is 100%.

Group of orthologs #156. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 T.maritima:64

L0PG08              	100.00%		Q9WYG8              	100.00%
Bootstrap support for L0PG08 as seed ortholog is 100%.
Bootstrap support for Q9WYG8 as seed ortholog is 100%.

Group of orthologs #157. Best score 63 bits
Score difference with first non-orthologous sequence - P.jiroveci:10 T.maritima:63

L0P720              	100.00%		Q9X167              	100.00%
L0PEP5              	33.03%		
Bootstrap support for L0P720 as seed ortholog is 63%.
Alternative seed ortholog is L0PGP4 (10 bits away from this cluster)
Bootstrap support for Q9X167 as seed ortholog is 100%.

Group of orthologs #158. Best score 63 bits
Score difference with first non-orthologous sequence - P.jiroveci:63 T.maritima:63

L0P8K4              	100.00%		Q9WZV4              	100.00%
Bootstrap support for L0P8K4 as seed ortholog is 100%.
Bootstrap support for Q9WZV4 as seed ortholog is 100%.

Group of orthologs #159. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 T.maritima:61

L0PCN6              	100.00%		Q9X1Q2              	100.00%
Bootstrap support for L0PCN6 as seed ortholog is 100%.
Bootstrap support for Q9X1Q2 as seed ortholog is 100%.

Group of orthologs #160. Best score 60 bits
Score difference with first non-orthologous sequence - P.jiroveci:60 T.maritima:60

L0PAY5              	100.00%		Q9X1R4              	100.00%
L0PEM1              	19.62%		
L0P8E7              	15.72%		
L0PCI7              	14.89%		
L0P6W8              	14.54%		
L0PDY0              	13.12%		
L0PC98              	12.65%		
L0PC64              	12.41%		
L0P7V6              	12.06%		
L0P853              	11.94%		
L0PBM6              	10.40%		
L0P966              	10.40%		
L0PBY8              	7.21%		
L0PEA5              	5.67%		
Bootstrap support for L0PAY5 as seed ortholog is 100%.
Bootstrap support for Q9X1R4 as seed ortholog is 100%.

Group of orthologs #161. Best score 60 bits
Score difference with first non-orthologous sequence - P.jiroveci:60 T.maritima:60

L0P724              	100.00%		Q9X1I1              	100.00%
Bootstrap support for L0P724 as seed ortholog is 100%.
Bootstrap support for Q9X1I1 as seed ortholog is 100%.

Group of orthologs #162. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 T.maritima:59

L0PA12              	100.00%		Q9X1I6              	100.00%
Bootstrap support for L0PA12 as seed ortholog is 100%.
Bootstrap support for Q9X1I6 as seed ortholog is 100%.

Group of orthologs #163. Best score 58 bits
Score difference with first non-orthologous sequence - P.jiroveci:58 T.maritima:58

L0PCA8              	100.00%		P38508              	100.00%
Bootstrap support for L0PCA8 as seed ortholog is 100%.
Bootstrap support for P38508 as seed ortholog is 100%.

Group of orthologs #164. Best score 58 bits
Score difference with first non-orthologous sequence - P.jiroveci:58 T.maritima:58

L0PE02              	100.00%		Q9X0I3              	100.00%
Bootstrap support for L0PE02 as seed ortholog is 100%.
Bootstrap support for Q9X0I3 as seed ortholog is 100%.

Group of orthologs #165. Best score 57 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 T.maritima:57

L0P8V0              	100.00%		Q9WZL3              	100.00%
                    	       		Q9WYM6              	15.31%
                    	       		Q9WYL1              	11.79%
Bootstrap support for L0P8V0 as seed ortholog is 100%.
Bootstrap support for Q9WZL3 as seed ortholog is 100%.

Group of orthologs #166. Best score 57 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 T.maritima:57

L0P9W3              	100.00%		Q9WZ90              	100.00%
                    	       		Q9WZ95              	5.53%
Bootstrap support for L0P9W3 as seed ortholog is 100%.
Bootstrap support for Q9WZ90 as seed ortholog is 100%.

Group of orthologs #167. Best score 57 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 T.maritima:57

L0PI13              	100.00%		P36205              	100.00%
Bootstrap support for L0PI13 as seed ortholog is 100%.
Bootstrap support for P36205 as seed ortholog is 100%.

Group of orthologs #168. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 T.maritima:56

L0P9N4              	100.00%		P38518              	100.00%
Bootstrap support for L0P9N4 as seed ortholog is 100%.
Bootstrap support for P38518 as seed ortholog is 100%.

Group of orthologs #169. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 T.maritima:56

L0PAS9              	100.00%		Q9WZD0              	100.00%
Bootstrap support for L0PAS9 as seed ortholog is 100%.
Bootstrap support for Q9WZD0 as seed ortholog is 100%.

Group of orthologs #170. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 T.maritima:54

L0PG86              	100.00%		Q9X055              	100.00%
Bootstrap support for L0PG86 as seed ortholog is 100%.
Bootstrap support for Q9X055 as seed ortholog is 100%.

Group of orthologs #171. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 T.maritima:54

L0PF41              	100.00%		Q9X1Q7              	100.00%
Bootstrap support for L0PF41 as seed ortholog is 100%.
Bootstrap support for Q9X1Q7 as seed ortholog is 100%.

Group of orthologs #172. Best score 52 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 T.maritima:52

L0PCI9              	100.00%		Q9X1U8              	100.00%
Bootstrap support for L0PCI9 as seed ortholog is 100%.
Bootstrap support for Q9X1U8 as seed ortholog is 100%.

Group of orthologs #173. Best score 49 bits
Score difference with first non-orthologous sequence - P.jiroveci:49 T.maritima:49

L0PA35              	100.00%		Q9X0G8              	100.00%
Bootstrap support for L0PA35 as seed ortholog is 100%.
Bootstrap support for Q9X0G8 as seed ortholog is 100%.

Group of orthologs #174. Best score 49 bits
Score difference with first non-orthologous sequence - P.jiroveci:49 T.maritima:49

L0PF92              	100.00%		Q9X1C5              	100.00%
Bootstrap support for L0PF92 as seed ortholog is 100%.
Bootstrap support for Q9X1C5 as seed ortholog is 100%.

Group of orthologs #175. Best score 48 bits
Score difference with first non-orthologous sequence - P.jiroveci:48 T.maritima:48

L0PBA4              	100.00%		Q9X0U2              	100.00%
Bootstrap support for L0PBA4 as seed ortholog is 100%.
Bootstrap support for Q9X0U2 as seed ortholog is 100%.

Group of orthologs #176. Best score 48 bits
Score difference with first non-orthologous sequence - P.jiroveci:48 T.maritima:48

L0PHW2              	100.00%		Q9WZN7              	100.00%
Bootstrap support for L0PHW2 as seed ortholog is 100%.
Bootstrap support for Q9WZN7 as seed ortholog is 100%.

Group of orthologs #177. Best score 45 bits
Score difference with first non-orthologous sequence - P.jiroveci:45 T.maritima:45

L0PDH7              	100.00%		P36203              	100.00%
L0PFP2              	39.56%		
Bootstrap support for L0PDH7 as seed ortholog is 100%.
Bootstrap support for P36203 as seed ortholog is 100%.

Group of orthologs #178. Best score 45 bits
Score difference with first non-orthologous sequence - P.jiroveci:45 T.maritima:45

L0P9G9              	100.00%		Q9WYJ8              	100.00%
Bootstrap support for L0P9G9 as seed ortholog is 100%.
Bootstrap support for Q9WYJ8 as seed ortholog is 100%.

Group of orthologs #179. Best score 45 bits
Score difference with first non-orthologous sequence - P.jiroveci:45 T.maritima:45

L0PGY0              	100.00%		P38511              	100.00%
Bootstrap support for L0PGY0 as seed ortholog is 100%.
Bootstrap support for P38511 as seed ortholog is 100%.

Group of orthologs #180. Best score 44 bits
Score difference with first non-orthologous sequence - P.jiroveci:44 T.maritima:44

L0PFN8              	100.00%		Q9X0X0              	100.00%
Bootstrap support for L0PFN8 as seed ortholog is 100%.
Bootstrap support for Q9X0X0 as seed ortholog is 100%.

Group of orthologs #181. Best score 43 bits
Score difference with first non-orthologous sequence - P.jiroveci:43 T.maritima:43

L0P7T1              	100.00%		Q60034              	100.00%
Bootstrap support for L0P7T1 as seed ortholog is 100%.
Bootstrap support for Q60034 as seed ortholog is 100%.

Group of orthologs #182. Best score 42 bits
Score difference with first non-orthologous sequence - P.jiroveci:42 T.maritima:42

L0PFC9              	100.00%		Q9WY08              	100.00%
                    	       		Q9X1M1              	13.82%
Bootstrap support for L0PFC9 as seed ortholog is 100%.
Bootstrap support for Q9WY08 as seed ortholog is 100%.