###################################
1424 groups of orthologs
1496 in-paralogs from P.jiroveci
2191 in-paralogs from S.tridecemlineatus
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 2193 bits
Score difference with first non-orthologous sequence - P.jiroveci:2193 S.tridecemlineatus:2193

L0PEQ1              	100.00%		I3M6B0              	100.00%
Bootstrap support for L0PEQ1 as seed ortholog is 100%.
Bootstrap support for I3M6B0 as seed ortholog is 100%.

Group of orthologs #2. Best score 2156 bits
Score difference with first non-orthologous sequence - P.jiroveci:2156 S.tridecemlineatus:2156

L0PHB1              	100.00%		I3MRE8              	100.00%
Bootstrap support for L0PHB1 as seed ortholog is 100%.
Bootstrap support for I3MRE8 as seed ortholog is 100%.

Group of orthologs #3. Best score 1985 bits
Score difference with first non-orthologous sequence - P.jiroveci:1985 S.tridecemlineatus:1985

L0PB90              	100.00%		I3LYD0              	100.00%
Bootstrap support for L0PB90 as seed ortholog is 100%.
Bootstrap support for I3LYD0 as seed ortholog is 100%.

Group of orthologs #4. Best score 1819 bits
Score difference with first non-orthologous sequence - P.jiroveci:1819 S.tridecemlineatus:1819

L0PGI2              	100.00%		I3M0I9              	100.00%
                    	       		I3M5C3              	53.18%
Bootstrap support for L0PGI2 as seed ortholog is 100%.
Bootstrap support for I3M0I9 as seed ortholog is 100%.

Group of orthologs #5. Best score 1790 bits
Score difference with first non-orthologous sequence - P.jiroveci:1790 S.tridecemlineatus:735

L0PBF5              	100.00%		I3M183              	100.00%
Bootstrap support for L0PBF5 as seed ortholog is 100%.
Bootstrap support for I3M183 as seed ortholog is 100%.

Group of orthologs #6. Best score 1789 bits
Score difference with first non-orthologous sequence - P.jiroveci:1789 S.tridecemlineatus:603

L0P7C3              	100.00%		I3MH43              	100.00%
Bootstrap support for L0P7C3 as seed ortholog is 100%.
Bootstrap support for I3MH43 as seed ortholog is 100%.

Group of orthologs #7. Best score 1449 bits
Score difference with first non-orthologous sequence - P.jiroveci:1449 S.tridecemlineatus:1449

L0PD06              	100.00%		I3M8C4              	100.00%
Bootstrap support for L0PD06 as seed ortholog is 100%.
Bootstrap support for I3M8C4 as seed ortholog is 100%.

Group of orthologs #8. Best score 1341 bits
Score difference with first non-orthologous sequence - P.jiroveci:1341 S.tridecemlineatus:1341

L0PG53              	100.00%		I3MGK4              	100.00%
Bootstrap support for L0PG53 as seed ortholog is 100%.
Bootstrap support for I3MGK4 as seed ortholog is 100%.

Group of orthologs #9. Best score 1212 bits
Score difference with first non-orthologous sequence - P.jiroveci:1212 S.tridecemlineatus:840

L0PGR1              	100.00%		I3MFE0              	100.00%
                    	       		I3MJK1              	54.11%
                    	       		I3N2R1              	49.97%
                    	       		I3N0B0              	10.86%
                    	       		I3M718              	9.77%
                    	       		I3M987              	8.81%
                    	       		I3MYF0              	8.63%
                    	       		I3MK44              	5.24%
Bootstrap support for L0PGR1 as seed ortholog is 100%.
Bootstrap support for I3MFE0 as seed ortholog is 100%.

Group of orthologs #10. Best score 1202 bits
Score difference with first non-orthologous sequence - P.jiroveci:1202 S.tridecemlineatus:1202

L0P818              	100.00%		I3M4Z3              	100.00%
                    	       		I3MAX1              	9.30%
Bootstrap support for L0P818 as seed ortholog is 100%.
Bootstrap support for I3M4Z3 as seed ortholog is 100%.

Group of orthologs #11. Best score 1198 bits
Score difference with first non-orthologous sequence - P.jiroveci:1198 S.tridecemlineatus:1198

L0PBY6              	100.00%		I3LXB9              	100.00%
Bootstrap support for L0PBY6 as seed ortholog is 100%.
Bootstrap support for I3LXB9 as seed ortholog is 100%.

Group of orthologs #12. Best score 1170 bits
Score difference with first non-orthologous sequence - P.jiroveci:1170 S.tridecemlineatus:1170

L0PFU4              	100.00%		I3MQY9              	100.00%
Bootstrap support for L0PFU4 as seed ortholog is 100%.
Bootstrap support for I3MQY9 as seed ortholog is 100%.

Group of orthologs #13. Best score 1164 bits
Score difference with first non-orthologous sequence - P.jiroveci:1164 S.tridecemlineatus:1164

L0P928              	100.00%		I3MD65              	100.00%
Bootstrap support for L0P928 as seed ortholog is 100%.
Bootstrap support for I3MD65 as seed ortholog is 100%.

Group of orthologs #14. Best score 1115 bits
Score difference with first non-orthologous sequence - P.jiroveci:1115 S.tridecemlineatus:1115

L0PDK3              	100.00%		I3MHP4              	100.00%
Bootstrap support for L0PDK3 as seed ortholog is 100%.
Bootstrap support for I3MHP4 as seed ortholog is 100%.

Group of orthologs #15. Best score 1081 bits
Score difference with first non-orthologous sequence - P.jiroveci:568 S.tridecemlineatus:598

L0PB13              	100.00%		I3LWU6              	100.00%
Bootstrap support for L0PB13 as seed ortholog is 100%.
Bootstrap support for I3LWU6 as seed ortholog is 100%.

Group of orthologs #16. Best score 1080 bits
Score difference with first non-orthologous sequence - P.jiroveci:1080 S.tridecemlineatus:389

L0PCK0              	100.00%		I3MGC1              	100.00%
L0P7U1              	99.05%		
Bootstrap support for L0PCK0 as seed ortholog is 100%.
Bootstrap support for I3MGC1 as seed ortholog is 100%.

Group of orthologs #17. Best score 1046 bits
Score difference with first non-orthologous sequence - P.jiroveci:849 S.tridecemlineatus:639

L0PG21              	100.00%		I3MFZ2              	100.00%
Bootstrap support for L0PG21 as seed ortholog is 100%.
Bootstrap support for I3MFZ2 as seed ortholog is 100%.

Group of orthologs #18. Best score 1027 bits
Score difference with first non-orthologous sequence - P.jiroveci:507 S.tridecemlineatus:503

L0PAJ7              	100.00%		I3MI56              	100.00%
Bootstrap support for L0PAJ7 as seed ortholog is 100%.
Bootstrap support for I3MI56 as seed ortholog is 100%.

Group of orthologs #19. Best score 978 bits
Score difference with first non-orthologous sequence - P.jiroveci:431 S.tridecemlineatus:978

L0P8X7              	100.00%		I3MLM8              	100.00%
Bootstrap support for L0P8X7 as seed ortholog is 100%.
Bootstrap support for I3MLM8 as seed ortholog is 100%.

Group of orthologs #20. Best score 972 bits
Score difference with first non-orthologous sequence - P.jiroveci:972 S.tridecemlineatus:794

L0PFN4              	100.00%		I3MR45              	100.00%
Bootstrap support for L0PFN4 as seed ortholog is 100%.
Bootstrap support for I3MR45 as seed ortholog is 100%.

Group of orthologs #21. Best score 970 bits
Score difference with first non-orthologous sequence - P.jiroveci:893 S.tridecemlineatus:545

L0PAG9              	100.00%		I3M8N3              	100.00%
                    	       		I3MVA3              	45.22%
Bootstrap support for L0PAG9 as seed ortholog is 100%.
Bootstrap support for I3M8N3 as seed ortholog is 100%.

Group of orthologs #22. Best score 970 bits
Score difference with first non-orthologous sequence - P.jiroveci:970 S.tridecemlineatus:970

L0P9P7              	100.00%		I3MB58              	100.00%
Bootstrap support for L0P9P7 as seed ortholog is 100%.
Bootstrap support for I3MB58 as seed ortholog is 100%.

Group of orthologs #23. Best score 967 bits
Score difference with first non-orthologous sequence - P.jiroveci:888 S.tridecemlineatus:328

L0PG61              	100.00%		I3M3Z1              	100.00%
                    	       		I3N490              	29.96%
Bootstrap support for L0PG61 as seed ortholog is 100%.
Bootstrap support for I3M3Z1 as seed ortholog is 99%.

Group of orthologs #24. Best score 962 bits
Score difference with first non-orthologous sequence - P.jiroveci:749 S.tridecemlineatus:397

L0PEK6              	100.00%		I3M2W9              	100.00%
                    	       		I3N733              	44.73%
                    	       		I3MKH2              	44.41%
                    	       		I3N1S7              	34.50%
                    	       		I3ND33              	15.34%
Bootstrap support for L0PEK6 as seed ortholog is 100%.
Bootstrap support for I3M2W9 as seed ortholog is 100%.

Group of orthologs #25. Best score 961 bits
Score difference with first non-orthologous sequence - P.jiroveci:356 S.tridecemlineatus:961

L0PDB3              	100.00%		I3MKG0              	100.00%
Bootstrap support for L0PDB3 as seed ortholog is 99%.
Bootstrap support for I3MKG0 as seed ortholog is 100%.

Group of orthologs #26. Best score 956 bits
Score difference with first non-orthologous sequence - P.jiroveci:956 S.tridecemlineatus:956

L0P915              	100.00%		I3M0A0              	100.00%
Bootstrap support for L0P915 as seed ortholog is 100%.
Bootstrap support for I3M0A0 as seed ortholog is 100%.

Group of orthologs #27. Best score 954 bits
Score difference with first non-orthologous sequence - P.jiroveci:954 S.tridecemlineatus:484

L0PDI4              	100.00%		I3N287              	100.00%
                    	       		I3MRW4              	70.11%
                    	       		I3NFP7              	44.64%
                    	       		I3M0R9              	16.20%
                    	       		M3ZCQ9              	16.02%
                    	       		I3MCB9              	15.84%
                    	       		I3MBZ4              	15.42%
                    	       		I3MCL3              	15.31%
                    	       		M3ZCQ8              	15.14%
                    	       		I3MHT6              	14.57%
                    	       		I3MBW9              	8.93%
Bootstrap support for L0PDI4 as seed ortholog is 100%.
Bootstrap support for I3N287 as seed ortholog is 100%.

Group of orthologs #28. Best score 929 bits
Score difference with first non-orthologous sequence - P.jiroveci:929 S.tridecemlineatus:929

L0P7V0              	100.00%		I3MMJ8              	100.00%
Bootstrap support for L0P7V0 as seed ortholog is 100%.
Bootstrap support for I3MMJ8 as seed ortholog is 100%.

Group of orthologs #29. Best score 916 bits
Score difference with first non-orthologous sequence - P.jiroveci:916 S.tridecemlineatus:285

L0PAW9              	100.00%		I3MDY9              	100.00%
L0PBZ0              	69.26%		I3NFM6              	97.96%
                    	       		I3M249              	83.67%
                    	       		I3NCN5              	64.38%
Bootstrap support for L0PAW9 as seed ortholog is 100%.
Bootstrap support for I3MDY9 as seed ortholog is 100%.

Group of orthologs #30. Best score 879 bits
Score difference with first non-orthologous sequence - P.jiroveci:560 S.tridecemlineatus:879

L0PBE4              	100.00%		I3MIQ5              	100.00%
Bootstrap support for L0PBE4 as seed ortholog is 100%.
Bootstrap support for I3MIQ5 as seed ortholog is 100%.

Group of orthologs #31. Best score 872 bits
Score difference with first non-orthologous sequence - P.jiroveci:872 S.tridecemlineatus:872

L0PCC4              	100.00%		I3MDE6              	100.00%
Bootstrap support for L0PCC4 as seed ortholog is 100%.
Bootstrap support for I3MDE6 as seed ortholog is 100%.

Group of orthologs #32. Best score 853 bits
Score difference with first non-orthologous sequence - P.jiroveci:556 S.tridecemlineatus:512

L0PCW9              	100.00%		I3MIA3              	100.00%
                    	       		I3M8L3              	66.72%
                    	       		I3MQ84              	55.36%
Bootstrap support for L0PCW9 as seed ortholog is 100%.
Bootstrap support for I3MIA3 as seed ortholog is 100%.

Group of orthologs #33. Best score 853 bits
Score difference with first non-orthologous sequence - P.jiroveci:853 S.tridecemlineatus:853

L0PAV3              	100.00%		I3M774              	100.00%
Bootstrap support for L0PAV3 as seed ortholog is 100%.
Bootstrap support for I3M774 as seed ortholog is 100%.

Group of orthologs #34. Best score 852 bits
Score difference with first non-orthologous sequence - P.jiroveci:852 S.tridecemlineatus:852

L0P9H4              	100.00%		I3M2V8              	100.00%
Bootstrap support for L0P9H4 as seed ortholog is 100%.
Bootstrap support for I3M2V8 as seed ortholog is 100%.

Group of orthologs #35. Best score 849 bits
Score difference with first non-orthologous sequence - P.jiroveci:698 S.tridecemlineatus:514

L0PFS2              	100.00%		I3MCA5              	100.00%
Bootstrap support for L0PFS2 as seed ortholog is 100%.
Bootstrap support for I3MCA5 as seed ortholog is 100%.

Group of orthologs #36. Best score 844 bits
Score difference with first non-orthologous sequence - P.jiroveci:844 S.tridecemlineatus:748

L0PDF1              	100.00%		I3M4L4              	100.00%
Bootstrap support for L0PDF1 as seed ortholog is 100%.
Bootstrap support for I3M4L4 as seed ortholog is 100%.

Group of orthologs #37. Best score 839 bits
Score difference with first non-orthologous sequence - P.jiroveci:839 S.tridecemlineatus:711

L0PEL5              	100.00%		I3MAT0              	100.00%
L0PGC2              	47.76%		I3M8N2              	64.47%
Bootstrap support for L0PEL5 as seed ortholog is 100%.
Bootstrap support for I3MAT0 as seed ortholog is 100%.

Group of orthologs #38. Best score 830 bits
Score difference with first non-orthologous sequence - P.jiroveci:830 S.tridecemlineatus:479

L0PGR4              	100.00%		I3MEL5              	100.00%
L0PFQ2              	92.20%		I3LWQ0              	18.07%
Bootstrap support for L0PGR4 as seed ortholog is 100%.
Bootstrap support for I3MEL5 as seed ortholog is 100%.

Group of orthologs #39. Best score 829 bits
Score difference with first non-orthologous sequence - P.jiroveci:829 S.tridecemlineatus:208

L0PDQ4              	100.00%		I3M8P9              	100.00%
Bootstrap support for L0PDQ4 as seed ortholog is 100%.
Bootstrap support for I3M8P9 as seed ortholog is 99%.

Group of orthologs #40. Best score 829 bits
Score difference with first non-orthologous sequence - P.jiroveci:634 S.tridecemlineatus:364

L0PFV0              	100.00%		Q3S4T7              	100.00%
Bootstrap support for L0PFV0 as seed ortholog is 100%.
Bootstrap support for Q3S4T7 as seed ortholog is 100%.

Group of orthologs #41. Best score 826 bits
Score difference with first non-orthologous sequence - P.jiroveci:826 S.tridecemlineatus:826

L0PAN4              	100.00%		I3M1E2              	100.00%
Bootstrap support for L0PAN4 as seed ortholog is 100%.
Bootstrap support for I3M1E2 as seed ortholog is 100%.

Group of orthologs #42. Best score 825 bits
Score difference with first non-orthologous sequence - P.jiroveci:825 S.tridecemlineatus:625

L0PD55              	100.00%		I3LXZ7              	100.00%
Bootstrap support for L0PD55 as seed ortholog is 100%.
Bootstrap support for I3LXZ7 as seed ortholog is 100%.

Group of orthologs #43. Best score 821 bits
Score difference with first non-orthologous sequence - P.jiroveci:627 S.tridecemlineatus:559

L0PBL6              	100.00%		I3M5A5              	100.00%
Bootstrap support for L0PBL6 as seed ortholog is 100%.
Bootstrap support for I3M5A5 as seed ortholog is 100%.

Group of orthologs #44. Best score 808 bits
Score difference with first non-orthologous sequence - P.jiroveci:537 S.tridecemlineatus:616

L0PGL8              	100.00%		I3M6K5              	100.00%
Bootstrap support for L0PGL8 as seed ortholog is 100%.
Bootstrap support for I3M6K5 as seed ortholog is 100%.

Group of orthologs #45. Best score 797 bits
Score difference with first non-orthologous sequence - P.jiroveci:797 S.tridecemlineatus:797

L0PC54              	100.00%		I3LZA6              	100.00%
Bootstrap support for L0PC54 as seed ortholog is 100%.
Bootstrap support for I3LZA6 as seed ortholog is 100%.

Group of orthologs #46. Best score 795 bits
Score difference with first non-orthologous sequence - P.jiroveci:795 S.tridecemlineatus:795

L0PBD7              	100.00%		I3NAA9              	100.00%
                    	       		I3M8V1              	66.83%
Bootstrap support for L0PBD7 as seed ortholog is 100%.
Bootstrap support for I3NAA9 as seed ortholog is 100%.

Group of orthologs #47. Best score 791 bits
Score difference with first non-orthologous sequence - P.jiroveci:791 S.tridecemlineatus:791

L0P7X5              	100.00%		I3MGH6              	100.00%
Bootstrap support for L0P7X5 as seed ortholog is 100%.
Bootstrap support for I3MGH6 as seed ortholog is 100%.

Group of orthologs #48. Best score 781 bits
Score difference with first non-orthologous sequence - P.jiroveci:781 S.tridecemlineatus:695

L0PBA5              	100.00%		I3MA74              	100.00%
                    	       		I3NGR1              	16.00%
Bootstrap support for L0PBA5 as seed ortholog is 100%.
Bootstrap support for I3MA74 as seed ortholog is 100%.

Group of orthologs #49. Best score 773 bits
Score difference with first non-orthologous sequence - P.jiroveci:773 S.tridecemlineatus:696

L0P7V1              	100.00%		I3MNI5              	100.00%
Bootstrap support for L0P7V1 as seed ortholog is 100%.
Bootstrap support for I3MNI5 as seed ortholog is 100%.

Group of orthologs #50. Best score 772 bits
Score difference with first non-orthologous sequence - P.jiroveci:772 S.tridecemlineatus:772

L0PH89              	100.00%		I3MDK8              	100.00%
Bootstrap support for L0PH89 as seed ortholog is 100%.
Bootstrap support for I3MDK8 as seed ortholog is 100%.

Group of orthologs #51. Best score 769 bits
Score difference with first non-orthologous sequence - P.jiroveci:769 S.tridecemlineatus:769

L0P9R9              	100.00%		I3M7I8              	100.00%
Bootstrap support for L0P9R9 as seed ortholog is 100%.
Bootstrap support for I3M7I8 as seed ortholog is 100%.

Group of orthologs #52. Best score 762 bits
Score difference with first non-orthologous sequence - P.jiroveci:762 S.tridecemlineatus:762

L0P710              	100.00%		I3ML90              	100.00%
Bootstrap support for L0P710 as seed ortholog is 100%.
Bootstrap support for I3ML90 as seed ortholog is 100%.

Group of orthologs #53. Best score 759 bits
Score difference with first non-orthologous sequence - P.jiroveci:401 S.tridecemlineatus:158

L0P9U5              	100.00%		I3LXE2              	100.00%
Bootstrap support for L0P9U5 as seed ortholog is 100%.
Bootstrap support for I3LXE2 as seed ortholog is 99%.

Group of orthologs #54. Best score 756 bits
Score difference with first non-orthologous sequence - P.jiroveci:293 S.tridecemlineatus:756

L0P833              	100.00%		I3M2S0              	100.00%
Bootstrap support for L0P833 as seed ortholog is 100%.
Bootstrap support for I3M2S0 as seed ortholog is 100%.

Group of orthologs #55. Best score 750 bits
Score difference with first non-orthologous sequence - P.jiroveci:750 S.tridecemlineatus:750

L0PBF3              	100.00%		I3MMG8              	100.00%
Bootstrap support for L0PBF3 as seed ortholog is 100%.
Bootstrap support for I3MMG8 as seed ortholog is 100%.

Group of orthologs #56. Best score 749 bits
Score difference with first non-orthologous sequence - P.jiroveci:693 S.tridecemlineatus:9

L0PAC9              	100.00%		I3MNB3              	100.00%
                    	       		I3NHI1              	30.81%
                    	       		I3MZU2              	13.21%
Bootstrap support for L0PAC9 as seed ortholog is 100%.
Bootstrap support for I3MNB3 as seed ortholog is 79%.

Group of orthologs #57. Best score 748 bits
Score difference with first non-orthologous sequence - P.jiroveci:748 S.tridecemlineatus:75

L0PBR4              	100.00%		I3MV11              	100.00%
                    	       		I3NB70              	90.06%
                    	       		I3ND93              	88.82%
                    	       		I3NEP5              	88.20%
                    	       		I3N5B8              	84.47%
                    	       		I3N9Y0              	70.81%
                    	       		I3N4W5              	70.19%
                    	       		I3MXL4              	65.84%
                    	       		I3NCW2              	63.35%
Bootstrap support for L0PBR4 as seed ortholog is 100%.
Bootstrap support for I3MV11 as seed ortholog is 99%.

Group of orthologs #58. Best score 745 bits
Score difference with first non-orthologous sequence - P.jiroveci:745 S.tridecemlineatus:745

L0PCG8              	100.00%		I3M925              	100.00%
Bootstrap support for L0PCG8 as seed ortholog is 100%.
Bootstrap support for I3M925 as seed ortholog is 100%.

Group of orthologs #59. Best score 745 bits
Score difference with first non-orthologous sequence - P.jiroveci:745 S.tridecemlineatus:745

L0PB43              	100.00%		I3MK57              	100.00%
Bootstrap support for L0PB43 as seed ortholog is 100%.
Bootstrap support for I3MK57 as seed ortholog is 100%.

Group of orthologs #60. Best score 743 bits
Score difference with first non-orthologous sequence - P.jiroveci:743 S.tridecemlineatus:743

L0P7K0              	100.00%		I3MF52              	100.00%
Bootstrap support for L0P7K0 as seed ortholog is 100%.
Bootstrap support for I3MF52 as seed ortholog is 100%.

Group of orthologs #61. Best score 740 bits
Score difference with first non-orthologous sequence - P.jiroveci:740 S.tridecemlineatus:247

L0PFJ0              	100.00%		I3NES7              	100.00%
Bootstrap support for L0PFJ0 as seed ortholog is 100%.
Bootstrap support for I3NES7 as seed ortholog is 100%.

Group of orthologs #62. Best score 737 bits
Score difference with first non-orthologous sequence - P.jiroveci:737 S.tridecemlineatus:238

L0PB85              	100.00%		I3LYB3              	100.00%
                    	       		I3M455              	18.69%
Bootstrap support for L0PB85 as seed ortholog is 100%.
Bootstrap support for I3LYB3 as seed ortholog is 99%.

Group of orthologs #63. Best score 734 bits
Score difference with first non-orthologous sequence - P.jiroveci:734 S.tridecemlineatus:297

L0PC37              	100.00%		I3LWD2              	100.00%
Bootstrap support for L0PC37 as seed ortholog is 100%.
Bootstrap support for I3LWD2 as seed ortholog is 100%.

Group of orthologs #64. Best score 729 bits
Score difference with first non-orthologous sequence - P.jiroveci:729 S.tridecemlineatus:729

L0PE57              	100.00%		I3MC38              	100.00%
Bootstrap support for L0PE57 as seed ortholog is 100%.
Bootstrap support for I3MC38 as seed ortholog is 100%.

Group of orthologs #65. Best score 726 bits
Score difference with first non-orthologous sequence - P.jiroveci:650 S.tridecemlineatus:726

L0PA93              	100.00%		I3M7U1              	100.00%
Bootstrap support for L0PA93 as seed ortholog is 100%.
Bootstrap support for I3M7U1 as seed ortholog is 100%.

Group of orthologs #66. Best score 726 bits
Score difference with first non-orthologous sequence - P.jiroveci:657 S.tridecemlineatus:518

L0PGA5              	100.00%		I3M4H9              	100.00%
Bootstrap support for L0PGA5 as seed ortholog is 100%.
Bootstrap support for I3M4H9 as seed ortholog is 100%.

Group of orthologs #67. Best score 724 bits
Score difference with first non-orthologous sequence - P.jiroveci:724 S.tridecemlineatus:179

L0PGU1              	100.00%		I3MM75              	100.00%
Bootstrap support for L0PGU1 as seed ortholog is 100%.
Bootstrap support for I3MM75 as seed ortholog is 99%.

Group of orthologs #68. Best score 723 bits
Score difference with first non-orthologous sequence - P.jiroveci:723 S.tridecemlineatus:723

L0P773              	100.00%		I3MBA5              	100.00%
Bootstrap support for L0P773 as seed ortholog is 100%.
Bootstrap support for I3MBA5 as seed ortholog is 100%.

Group of orthologs #69. Best score 719 bits
Score difference with first non-orthologous sequence - P.jiroveci:430 S.tridecemlineatus:453

L0PBV5              	100.00%		I3LYF8              	100.00%
Bootstrap support for L0PBV5 as seed ortholog is 100%.
Bootstrap support for I3LYF8 as seed ortholog is 100%.

Group of orthologs #70. Best score 717 bits
Score difference with first non-orthologous sequence - P.jiroveci:717 S.tridecemlineatus:717

L0PAQ3              	100.00%		I3MIB4              	100.00%
                    	       		I3M3H8              	69.32%
                    	       		I3MMU1              	68.73%
Bootstrap support for L0PAQ3 as seed ortholog is 100%.
Bootstrap support for I3MIB4 as seed ortholog is 100%.

Group of orthologs #71. Best score 715 bits
Score difference with first non-orthologous sequence - P.jiroveci:715 S.tridecemlineatus:715

L0PDK6              	100.00%		I3LZB8              	100.00%
Bootstrap support for L0PDK6 as seed ortholog is 100%.
Bootstrap support for I3LZB8 as seed ortholog is 100%.

Group of orthologs #72. Best score 715 bits
Score difference with first non-orthologous sequence - P.jiroveci:715 S.tridecemlineatus:715

L0PBW3              	100.00%		I3M7G1              	100.00%
Bootstrap support for L0PBW3 as seed ortholog is 100%.
Bootstrap support for I3M7G1 as seed ortholog is 100%.

Group of orthologs #73. Best score 715 bits
Score difference with first non-orthologous sequence - P.jiroveci:333 S.tridecemlineatus:193

L0PFC8              	100.00%		I3MNZ4              	100.00%
Bootstrap support for L0PFC8 as seed ortholog is 100%.
Bootstrap support for I3MNZ4 as seed ortholog is 100%.

Group of orthologs #74. Best score 697 bits
Score difference with first non-orthologous sequence - P.jiroveci:697 S.tridecemlineatus:470

L0P945              	100.00%		I3M6B1              	100.00%
Bootstrap support for L0P945 as seed ortholog is 100%.
Bootstrap support for I3M6B1 as seed ortholog is 100%.

Group of orthologs #75. Best score 697 bits
Score difference with first non-orthologous sequence - P.jiroveci:697 S.tridecemlineatus:697

L0PBY5              	100.00%		I3MF19              	100.00%
Bootstrap support for L0PBY5 as seed ortholog is 100%.
Bootstrap support for I3MF19 as seed ortholog is 100%.

Group of orthologs #76. Best score 691 bits
Score difference with first non-orthologous sequence - P.jiroveci:691 S.tridecemlineatus:691

L0P8L6              	100.00%		I3M8P7              	100.00%
Bootstrap support for L0P8L6 as seed ortholog is 100%.
Bootstrap support for I3M8P7 as seed ortholog is 100%.

Group of orthologs #77. Best score 687 bits
Score difference with first non-orthologous sequence - P.jiroveci:532 S.tridecemlineatus:165

L0PA91              	100.00%		I3MNL1              	100.00%
                    	       		I3M8N5              	53.42%
                    	       		I3MPZ1              	50.68%
                    	       		I3N437              	47.95%
                    	       		I3MMT4              	46.58%
                    	       		I3N266              	45.21%
                    	       		I3MNG2              	43.84%
                    	       		I3MYK3              	5.48%
Bootstrap support for L0PA91 as seed ortholog is 100%.
Bootstrap support for I3MNL1 as seed ortholog is 100%.

Group of orthologs #78. Best score 685 bits
Score difference with first non-orthologous sequence - P.jiroveci:685 S.tridecemlineatus:319

L0PEK9              	100.00%		I3N1L7              	100.00%
Bootstrap support for L0PEK9 as seed ortholog is 100%.
Bootstrap support for I3N1L7 as seed ortholog is 100%.

Group of orthologs #79. Best score 682 bits
Score difference with first non-orthologous sequence - P.jiroveci:182 S.tridecemlineatus:189

L0P9U6              	100.00%		I3LZL6              	100.00%
Bootstrap support for L0P9U6 as seed ortholog is 99%.
Bootstrap support for I3LZL6 as seed ortholog is 99%.

Group of orthologs #80. Best score 679 bits
Score difference with first non-orthologous sequence - P.jiroveci:592 S.tridecemlineatus:464

L0P976              	100.00%		I3LZ87              	100.00%
Bootstrap support for L0P976 as seed ortholog is 100%.
Bootstrap support for I3LZ87 as seed ortholog is 100%.

Group of orthologs #81. Best score 679 bits
Score difference with first non-orthologous sequence - P.jiroveci:679 S.tridecemlineatus:679

L0P971              	100.00%		I3M6S8              	100.00%
Bootstrap support for L0P971 as seed ortholog is 100%.
Bootstrap support for I3M6S8 as seed ortholog is 100%.

Group of orthologs #82. Best score 678 bits
Score difference with first non-orthologous sequence - P.jiroveci:678 S.tridecemlineatus:399

L0PG19              	100.00%		I3M1F3              	100.00%
                    	       		I3LXC0              	19.34%
Bootstrap support for L0PG19 as seed ortholog is 100%.
Bootstrap support for I3M1F3 as seed ortholog is 100%.

Group of orthologs #83. Best score 677 bits
Score difference with first non-orthologous sequence - P.jiroveci:677 S.tridecemlineatus:459

L0PG45              	100.00%		I3MH64              	100.00%
Bootstrap support for L0PG45 as seed ortholog is 100%.
Bootstrap support for I3MH64 as seed ortholog is 100%.

Group of orthologs #84. Best score 675 bits
Score difference with first non-orthologous sequence - P.jiroveci:675 S.tridecemlineatus:675

L0PC79              	100.00%		I3M2J0              	100.00%
                    	       		I3LZ88              	19.51%
                    	       		I3M7J7              	15.71%
                    	       		I3N1Y0              	9.17%
Bootstrap support for L0PC79 as seed ortholog is 100%.
Bootstrap support for I3M2J0 as seed ortholog is 100%.

Group of orthologs #85. Best score 674 bits
Score difference with first non-orthologous sequence - P.jiroveci:394 S.tridecemlineatus:412

L0PG32              	100.00%		I3MLD4              	100.00%
Bootstrap support for L0PG32 as seed ortholog is 100%.
Bootstrap support for I3MLD4 as seed ortholog is 100%.

Group of orthologs #86. Best score 672 bits
Score difference with first non-orthologous sequence - P.jiroveci:578 S.tridecemlineatus:400

L0PCT0              	100.00%		I3M3V4              	100.00%
Bootstrap support for L0PCT0 as seed ortholog is 100%.
Bootstrap support for I3M3V4 as seed ortholog is 100%.

Group of orthologs #87. Best score 671 bits
Score difference with first non-orthologous sequence - P.jiroveci:671 S.tridecemlineatus:599

L0PA41              	100.00%		I3M2F2              	100.00%
Bootstrap support for L0PA41 as seed ortholog is 100%.
Bootstrap support for I3M2F2 as seed ortholog is 100%.

Group of orthologs #88. Best score 668 bits
Score difference with first non-orthologous sequence - P.jiroveci:668 S.tridecemlineatus:242

L0PAS8              	100.00%		I3M136              	100.00%
Bootstrap support for L0PAS8 as seed ortholog is 100%.
Bootstrap support for I3M136 as seed ortholog is 100%.

Group of orthologs #89. Best score 666 bits
Score difference with first non-orthologous sequence - P.jiroveci:666 S.tridecemlineatus:666

L0PC65              	100.00%		I3LZ83              	100.00%
                    	       		I3MMI4              	10.56%
Bootstrap support for L0PC65 as seed ortholog is 100%.
Bootstrap support for I3LZ83 as seed ortholog is 100%.

Group of orthologs #90. Best score 663 bits
Score difference with first non-orthologous sequence - P.jiroveci:663 S.tridecemlineatus:478

L0PER6              	100.00%		I3MM58              	100.00%
Bootstrap support for L0PER6 as seed ortholog is 100%.
Bootstrap support for I3MM58 as seed ortholog is 100%.

Group of orthologs #91. Best score 661 bits
Score difference with first non-orthologous sequence - P.jiroveci:661 S.tridecemlineatus:611

L0P8M6              	100.00%		I3NHQ4              	100.00%
                    	       		I3M2A8              	70.15%
Bootstrap support for L0P8M6 as seed ortholog is 100%.
Bootstrap support for I3NHQ4 as seed ortholog is 100%.

Group of orthologs #92. Best score 661 bits
Score difference with first non-orthologous sequence - P.jiroveci:661 S.tridecemlineatus:661

L0PDI6              	100.00%		I3MAN7              	100.00%
Bootstrap support for L0PDI6 as seed ortholog is 100%.
Bootstrap support for I3MAN7 as seed ortholog is 100%.

Group of orthologs #93. Best score 660 bits
Score difference with first non-orthologous sequence - P.jiroveci:366 S.tridecemlineatus:660

L0PFG7              	100.00%		I3M3U0              	100.00%
Bootstrap support for L0PFG7 as seed ortholog is 100%.
Bootstrap support for I3M3U0 as seed ortholog is 100%.

Group of orthologs #94. Best score 658 bits
Score difference with first non-orthologous sequence - P.jiroveci:359 S.tridecemlineatus:380

L0PBN5              	100.00%		I3M702              	100.00%
Bootstrap support for L0PBN5 as seed ortholog is 100%.
Bootstrap support for I3M702 as seed ortholog is 100%.

Group of orthologs #95. Best score 658 bits
Score difference with first non-orthologous sequence - P.jiroveci:658 S.tridecemlineatus:658

L0PAP2              	100.00%		I3MJG5              	100.00%
Bootstrap support for L0PAP2 as seed ortholog is 100%.
Bootstrap support for I3MJG5 as seed ortholog is 100%.

Group of orthologs #96. Best score 654 bits
Score difference with first non-orthologous sequence - P.jiroveci:654 S.tridecemlineatus:654

L0PEQ8              	100.00%		I3NDY4              	100.00%
                    	       		I3M7P3              	50.33%
                    	       		I3LZH5              	49.23%
Bootstrap support for L0PEQ8 as seed ortholog is 100%.
Bootstrap support for I3NDY4 as seed ortholog is 100%.

Group of orthologs #97. Best score 651 bits
Score difference with first non-orthologous sequence - P.jiroveci:387 S.tridecemlineatus:414

L0PE26              	100.00%		I3NAF1              	100.00%
Bootstrap support for L0PE26 as seed ortholog is 100%.
Bootstrap support for I3NAF1 as seed ortholog is 100%.

Group of orthologs #98. Best score 649 bits
Score difference with first non-orthologous sequence - P.jiroveci:649 S.tridecemlineatus:515

L0PGS4              	100.00%		I3MFK6              	100.00%
                    	       		I3NGK3              	60.85%
                    	       		I3N634              	12.17%
Bootstrap support for L0PGS4 as seed ortholog is 100%.
Bootstrap support for I3MFK6 as seed ortholog is 100%.

Group of orthologs #99. Best score 647 bits
Score difference with first non-orthologous sequence - P.jiroveci:647 S.tridecemlineatus:647

L0PF68              	100.00%		I3LYR3              	100.00%
Bootstrap support for L0PF68 as seed ortholog is 100%.
Bootstrap support for I3LYR3 as seed ortholog is 100%.

Group of orthologs #100. Best score 634 bits
Score difference with first non-orthologous sequence - P.jiroveci:335 S.tridecemlineatus:355

L0PD31              	100.00%		I3MEH0              	100.00%
Bootstrap support for L0PD31 as seed ortholog is 100%.
Bootstrap support for I3MEH0 as seed ortholog is 100%.

Group of orthologs #101. Best score 631 bits
Score difference with first non-orthologous sequence - P.jiroveci:631 S.tridecemlineatus:631

L0P8C8              	100.00%		I3M5D8              	100.00%
Bootstrap support for L0P8C8 as seed ortholog is 100%.
Bootstrap support for I3M5D8 as seed ortholog is 100%.

Group of orthologs #102. Best score 631 bits
Score difference with first non-orthologous sequence - P.jiroveci:631 S.tridecemlineatus:631

L0PCR2              	100.00%		I3MCB2              	100.00%
Bootstrap support for L0PCR2 as seed ortholog is 100%.
Bootstrap support for I3MCB2 as seed ortholog is 100%.

Group of orthologs #103. Best score 629 bits
Score difference with first non-orthologous sequence - P.jiroveci:629 S.tridecemlineatus:188

L0PDJ1              	100.00%		I3M1J1              	100.00%
Bootstrap support for L0PDJ1 as seed ortholog is 100%.
Bootstrap support for I3M1J1 as seed ortholog is 99%.

Group of orthologs #104. Best score 629 bits
Score difference with first non-orthologous sequence - P.jiroveci:629 S.tridecemlineatus:482

L0PEP7              	100.00%		I3MMP0              	100.00%
Bootstrap support for L0PEP7 as seed ortholog is 100%.
Bootstrap support for I3MMP0 as seed ortholog is 100%.

Group of orthologs #105. Best score 627 bits
Score difference with first non-orthologous sequence - P.jiroveci:313 S.tridecemlineatus:322

L0P8L4              	100.00%		I3MBZ1              	100.00%
                    	       		I3N985              	12.42%
Bootstrap support for L0P8L4 as seed ortholog is 99%.
Bootstrap support for I3MBZ1 as seed ortholog is 100%.

Group of orthologs #106. Best score 624 bits
Score difference with first non-orthologous sequence - P.jiroveci:624 S.tridecemlineatus:624

L0P7V2              	100.00%		I3M9W3              	100.00%
Bootstrap support for L0P7V2 as seed ortholog is 100%.
Bootstrap support for I3M9W3 as seed ortholog is 100%.

Group of orthologs #107. Best score 621 bits
Score difference with first non-orthologous sequence - P.jiroveci:498 S.tridecemlineatus:260

L0P8E7              	100.00%		I3MFP7              	100.00%
Bootstrap support for L0P8E7 as seed ortholog is 100%.
Bootstrap support for I3MFP7 as seed ortholog is 100%.

Group of orthologs #108. Best score 619 bits
Score difference with first non-orthologous sequence - P.jiroveci:619 S.tridecemlineatus:235

L0P7L0              	100.00%		I3NB31              	100.00%
L0PCI7              	43.34%		
Bootstrap support for L0P7L0 as seed ortholog is 100%.
Bootstrap support for I3NB31 as seed ortholog is 99%.

Group of orthologs #109. Best score 619 bits
Score difference with first non-orthologous sequence - P.jiroveci:619 S.tridecemlineatus:619

L0PF80              	100.00%		I3M677              	100.00%
Bootstrap support for L0PF80 as seed ortholog is 100%.
Bootstrap support for I3M677 as seed ortholog is 100%.

Group of orthologs #110. Best score 615 bits
Score difference with first non-orthologous sequence - P.jiroveci:615 S.tridecemlineatus:429

L0P8G2              	100.00%		I3N0K3              	100.00%
                    	       		I3MJR2              	52.10%
Bootstrap support for L0P8G2 as seed ortholog is 100%.
Bootstrap support for I3N0K3 as seed ortholog is 100%.

Group of orthologs #111. Best score 613 bits
Score difference with first non-orthologous sequence - P.jiroveci:613 S.tridecemlineatus:613

L0P9S1              	100.00%		I3M5Q4              	100.00%
Bootstrap support for L0P9S1 as seed ortholog is 100%.
Bootstrap support for I3M5Q4 as seed ortholog is 100%.

Group of orthologs #112. Best score 611 bits
Score difference with first non-orthologous sequence - P.jiroveci:333 S.tridecemlineatus:328

L0PFW1              	100.00%		I3MM65              	100.00%
                    	       		I3MFX4              	63.83%
                    	       		I3MQV5              	47.39%
                    	       		I3MAZ9              	25.74%
Bootstrap support for L0PFW1 as seed ortholog is 100%.
Bootstrap support for I3MM65 as seed ortholog is 100%.

Group of orthologs #113. Best score 611 bits
Score difference with first non-orthologous sequence - P.jiroveci:611 S.tridecemlineatus:611

L0PBN0              	100.00%		I3M0X4              	100.00%
Bootstrap support for L0PBN0 as seed ortholog is 100%.
Bootstrap support for I3M0X4 as seed ortholog is 100%.

Group of orthologs #114. Best score 610 bits
Score difference with first non-orthologous sequence - P.jiroveci:610 S.tridecemlineatus:610

L0PDF3              	100.00%		I3MMS7              	100.00%
Bootstrap support for L0PDF3 as seed ortholog is 100%.
Bootstrap support for I3MMS7 as seed ortholog is 100%.

Group of orthologs #115. Best score 609 bits
Score difference with first non-orthologous sequence - P.jiroveci:609 S.tridecemlineatus:609

L0PB96              	100.00%		I3M824              	100.00%
Bootstrap support for L0PB96 as seed ortholog is 100%.
Bootstrap support for I3M824 as seed ortholog is 100%.

Group of orthologs #116. Best score 608 bits
Score difference with first non-orthologous sequence - P.jiroveci:292 S.tridecemlineatus:354

L0PG07              	100.00%		I3MCS4              	100.00%
Bootstrap support for L0PG07 as seed ortholog is 100%.
Bootstrap support for I3MCS4 as seed ortholog is 100%.

Group of orthologs #117. Best score 605 bits
Score difference with first non-orthologous sequence - P.jiroveci:352 S.tridecemlineatus:242

L0P850              	100.00%		I3N892              	100.00%
Bootstrap support for L0P850 as seed ortholog is 100%.
Bootstrap support for I3N892 as seed ortholog is 99%.

Group of orthologs #118. Best score 604 bits
Score difference with first non-orthologous sequence - P.jiroveci:604 S.tridecemlineatus:361

L0PAR0              	100.00%		I3M2U2              	100.00%
                    	       		I3N6F5              	90.91%
Bootstrap support for L0PAR0 as seed ortholog is 100%.
Bootstrap support for I3M2U2 as seed ortholog is 100%.

Group of orthologs #119. Best score 601 bits
Score difference with first non-orthologous sequence - P.jiroveci:601 S.tridecemlineatus:601

L0PCV7              	100.00%		I3MEQ2              	100.00%
Bootstrap support for L0PCV7 as seed ortholog is 100%.
Bootstrap support for I3MEQ2 as seed ortholog is 100%.

Group of orthologs #120. Best score 598 bits
Score difference with first non-orthologous sequence - P.jiroveci:261 S.tridecemlineatus:282

L0PEK2              	100.00%		I3M4W4              	100.00%
Bootstrap support for L0PEK2 as seed ortholog is 99%.
Bootstrap support for I3M4W4 as seed ortholog is 100%.

Group of orthologs #121. Best score 597 bits
Score difference with first non-orthologous sequence - P.jiroveci:597 S.tridecemlineatus:597

L0P7N3              	100.00%		I3LZ92              	100.00%
                    	       		I3LZX2              	51.82%
Bootstrap support for L0P7N3 as seed ortholog is 100%.
Bootstrap support for I3LZ92 as seed ortholog is 100%.

Group of orthologs #122. Best score 597 bits
Score difference with first non-orthologous sequence - P.jiroveci:479 S.tridecemlineatus:388

L0P853              	100.00%		I3MN00              	100.00%
L0P8M8              	55.04%		
Bootstrap support for L0P853 as seed ortholog is 100%.
Bootstrap support for I3MN00 as seed ortholog is 100%.

Group of orthologs #123. Best score 593 bits
Score difference with first non-orthologous sequence - P.jiroveci:593 S.tridecemlineatus:593

L0PHB7              	100.00%		I3LYB4              	100.00%
Bootstrap support for L0PHB7 as seed ortholog is 100%.
Bootstrap support for I3LYB4 as seed ortholog is 100%.

Group of orthologs #124. Best score 588 bits
Score difference with first non-orthologous sequence - P.jiroveci:588 S.tridecemlineatus:588

L0P8W6              	100.00%		I3LXX3              	100.00%
                    	       		I3MXT5              	72.32%
                    	       		I3MI67              	68.67%
Bootstrap support for L0P8W6 as seed ortholog is 100%.
Bootstrap support for I3LXX3 as seed ortholog is 100%.

Group of orthologs #125. Best score 586 bits
Score difference with first non-orthologous sequence - P.jiroveci:478 S.tridecemlineatus:197

L0PIF0              	100.00%		I3M7A4              	100.00%
                    	       		I3MBU0              	9.75%
Bootstrap support for L0PIF0 as seed ortholog is 100%.
Bootstrap support for I3M7A4 as seed ortholog is 99%.

Group of orthologs #126. Best score 586 bits
Score difference with first non-orthologous sequence - P.jiroveci:586 S.tridecemlineatus:586

L0P7T0              	100.00%		I3M765              	100.00%
Bootstrap support for L0P7T0 as seed ortholog is 100%.
Bootstrap support for I3M765 as seed ortholog is 100%.

Group of orthologs #127. Best score 585 bits
Score difference with first non-orthologous sequence - P.jiroveci:585 S.tridecemlineatus:585

L0P958              	100.00%		I3LZX4              	100.00%
Bootstrap support for L0P958 as seed ortholog is 100%.
Bootstrap support for I3LZX4 as seed ortholog is 100%.

Group of orthologs #128. Best score 584 bits
Score difference with first non-orthologous sequence - P.jiroveci:466 S.tridecemlineatus:170

L0PDY0              	100.00%		I3MB14              	100.00%
Bootstrap support for L0PDY0 as seed ortholog is 100%.
Bootstrap support for I3MB14 as seed ortholog is 99%.

Group of orthologs #129. Best score 583 bits
Score difference with first non-orthologous sequence - P.jiroveci:583 S.tridecemlineatus:583

L0PC43              	100.00%		I3MM87              	100.00%
L0PCW3              	100.00%		
Bootstrap support for L0PC43 as seed ortholog is 100%.
Bootstrap support for L0PCW3 as seed ortholog is 100%.
Bootstrap support for I3MM87 as seed ortholog is 100%.

Group of orthologs #130. Best score 583 bits
Score difference with first non-orthologous sequence - P.jiroveci:507 S.tridecemlineatus:447

L0PCS2              	100.00%		I3M9C2              	100.00%
Bootstrap support for L0PCS2 as seed ortholog is 100%.
Bootstrap support for I3M9C2 as seed ortholog is 100%.

Group of orthologs #131. Best score 582 bits
Score difference with first non-orthologous sequence - P.jiroveci:582 S.tridecemlineatus:582

L0PBV4              	100.00%		I3M3E0              	100.00%
Bootstrap support for L0PBV4 as seed ortholog is 100%.
Bootstrap support for I3M3E0 as seed ortholog is 100%.

Group of orthologs #132. Best score 581 bits
Score difference with first non-orthologous sequence - P.jiroveci:581 S.tridecemlineatus:581

L0PDG3              	100.00%		I3NBQ5              	100.00%
                    	       		I3MGU0              	40.33%
Bootstrap support for L0PDG3 as seed ortholog is 100%.
Bootstrap support for I3NBQ5 as seed ortholog is 100%.

Group of orthologs #133. Best score 581 bits
Score difference with first non-orthologous sequence - P.jiroveci:581 S.tridecemlineatus:581

L0PDR3              	100.00%		I3MQP1              	100.00%
Bootstrap support for L0PDR3 as seed ortholog is 100%.
Bootstrap support for I3MQP1 as seed ortholog is 100%.

Group of orthologs #134. Best score 579 bits
Score difference with first non-orthologous sequence - P.jiroveci:579 S.tridecemlineatus:579

L0PAX4              	100.00%		I3MHQ9              	100.00%
Bootstrap support for L0PAX4 as seed ortholog is 100%.
Bootstrap support for I3MHQ9 as seed ortholog is 100%.

Group of orthologs #135. Best score 579 bits
Score difference with first non-orthologous sequence - P.jiroveci:579 S.tridecemlineatus:579

L0PEW0              	100.00%		I3MN95              	100.00%
Bootstrap support for L0PEW0 as seed ortholog is 100%.
Bootstrap support for I3MN95 as seed ortholog is 100%.

Group of orthologs #136. Best score 578 bits
Score difference with first non-orthologous sequence - P.jiroveci:578 S.tridecemlineatus:578

L0PDU2              	100.00%		I3M4L8              	100.00%
Bootstrap support for L0PDU2 as seed ortholog is 100%.
Bootstrap support for I3M4L8 as seed ortholog is 100%.

Group of orthologs #137. Best score 577 bits
Score difference with first non-orthologous sequence - P.jiroveci:577 S.tridecemlineatus:577

L0PES7              	100.00%		I3MJL9              	100.00%
Bootstrap support for L0PES7 as seed ortholog is 100%.
Bootstrap support for I3MJL9 as seed ortholog is 100%.

Group of orthologs #138. Best score 576 bits
Score difference with first non-orthologous sequence - P.jiroveci:576 S.tridecemlineatus:120

L0PBW1              	100.00%		I3MIF0              	100.00%
                    	       		I3N7W7              	40.16%
Bootstrap support for L0PBW1 as seed ortholog is 100%.
Bootstrap support for I3MIF0 as seed ortholog is 99%.

Group of orthologs #139. Best score 574 bits
Score difference with first non-orthologous sequence - P.jiroveci:193 S.tridecemlineatus:574

L0PBH4              	100.00%		I3MDJ7              	100.00%
                    	       		I3MZK2              	100.00%
                    	       		I3N4X4              	15.85%
Bootstrap support for L0PBH4 as seed ortholog is 100%.
Bootstrap support for I3MDJ7 as seed ortholog is 100%.
Bootstrap support for I3MZK2 as seed ortholog is 100%.

Group of orthologs #140. Best score 573 bits
Score difference with first non-orthologous sequence - P.jiroveci:573 S.tridecemlineatus:573

L0PFT7              	100.00%		I3LXQ7              	100.00%
Bootstrap support for L0PFT7 as seed ortholog is 100%.
Bootstrap support for I3LXQ7 as seed ortholog is 100%.

Group of orthologs #141. Best score 572 bits
Score difference with first non-orthologous sequence - P.jiroveci:572 S.tridecemlineatus:572

L0PB97              	100.00%		I3MUU4              	100.00%
                    	       		I3LXZ1              	68.59%
Bootstrap support for L0PB97 as seed ortholog is 100%.
Bootstrap support for I3MUU4 as seed ortholog is 100%.

Group of orthologs #142. Best score 572 bits
Score difference with first non-orthologous sequence - P.jiroveci:439 S.tridecemlineatus:323

L0PC64              	100.00%		I3M0V0              	100.00%
Bootstrap support for L0PC64 as seed ortholog is 100%.
Bootstrap support for I3M0V0 as seed ortholog is 100%.

Group of orthologs #143. Best score 571 bits
Score difference with first non-orthologous sequence - P.jiroveci:386 S.tridecemlineatus:571

L0PCD8              	100.00%		I3M6V7              	100.00%
Bootstrap support for L0PCD8 as seed ortholog is 100%.
Bootstrap support for I3M6V7 as seed ortholog is 100%.

Group of orthologs #144. Best score 569 bits
Score difference with first non-orthologous sequence - P.jiroveci:569 S.tridecemlineatus:569

L0PBM4              	100.00%		I3MT89              	100.00%
                    	       		I3MNB1              	26.19%
Bootstrap support for L0PBM4 as seed ortholog is 100%.
Bootstrap support for I3MT89 as seed ortholog is 100%.

Group of orthologs #145. Best score 566 bits
Score difference with first non-orthologous sequence - P.jiroveci:566 S.tridecemlineatus:126

L0PG37              	100.00%		I3N7J4              	100.00%
                    	       		I3MDR3              	37.74%
                    	       		I3N945              	7.11%
                    	       		I3MWF3              	6.53%
Bootstrap support for L0PG37 as seed ortholog is 100%.
Bootstrap support for I3N7J4 as seed ortholog is 99%.

Group of orthologs #146. Best score 566 bits
Score difference with first non-orthologous sequence - P.jiroveci:566 S.tridecemlineatus:376

L0PA75              	100.00%		I3MR98              	100.00%
                    	       		I3MAA0              	44.01%
Bootstrap support for L0PA75 as seed ortholog is 100%.
Bootstrap support for I3MR98 as seed ortholog is 100%.

Group of orthologs #147. Best score 563 bits
Score difference with first non-orthologous sequence - P.jiroveci:563 S.tridecemlineatus:563

L0PCA7              	100.00%		I3MND2              	100.00%
Bootstrap support for L0PCA7 as seed ortholog is 100%.
Bootstrap support for I3MND2 as seed ortholog is 100%.

Group of orthologs #148. Best score 559 bits
Score difference with first non-orthologous sequence - P.jiroveci:25 S.tridecemlineatus:77

L0PGY9              	100.00%		I3MJS8              	100.00%
                    	       		I3MII7              	34.79%
Bootstrap support for L0PGY9 as seed ortholog is 74%.
Alternative seed ortholog is L0PCK5 (25 bits away from this cluster)
Bootstrap support for I3MJS8 as seed ortholog is 96%.

Group of orthologs #149. Best score 558 bits
Score difference with first non-orthologous sequence - P.jiroveci:558 S.tridecemlineatus:558

L0P917              	100.00%		I3LXJ9              	100.00%
L0PF20              	86.22%		
Bootstrap support for L0P917 as seed ortholog is 100%.
Bootstrap support for I3LXJ9 as seed ortholog is 100%.

Group of orthologs #150. Best score 554 bits
Score difference with first non-orthologous sequence - P.jiroveci:554 S.tridecemlineatus:554

L0P8P8              	100.00%		I3M0P6              	100.00%
Bootstrap support for L0P8P8 as seed ortholog is 100%.
Bootstrap support for I3M0P6 as seed ortholog is 100%.

Group of orthologs #151. Best score 552 bits
Score difference with first non-orthologous sequence - P.jiroveci:197 S.tridecemlineatus:399

L0P7D9              	100.00%		I3MFR0              	100.00%
Bootstrap support for L0P7D9 as seed ortholog is 100%.
Bootstrap support for I3MFR0 as seed ortholog is 100%.

Group of orthologs #152. Best score 548 bits
Score difference with first non-orthologous sequence - P.jiroveci:548 S.tridecemlineatus:548

L0P9U3              	100.00%		I3N234              	100.00%
Bootstrap support for L0P9U3 as seed ortholog is 100%.
Bootstrap support for I3N234 as seed ortholog is 100%.

Group of orthologs #153. Best score 543 bits
Score difference with first non-orthologous sequence - P.jiroveci:543 S.tridecemlineatus:543

L0PG77              	100.00%		I3M351              	100.00%
Bootstrap support for L0PG77 as seed ortholog is 100%.
Bootstrap support for I3M351 as seed ortholog is 100%.

Group of orthologs #154. Best score 540 bits
Score difference with first non-orthologous sequence - P.jiroveci:540 S.tridecemlineatus:166

L0P905              	100.00%		I3ME26              	100.00%
                    	       		I3MM50              	33.03%
                    	       		I3N5W0              	30.20%
                    	       		I3N308              	23.81%
                    	       		I3N0M8              	16.43%
                    	       		I3M2W6              	11.61%
                    	       		I3MFS7              	6.78%
Bootstrap support for L0P905 as seed ortholog is 100%.
Bootstrap support for I3ME26 as seed ortholog is 99%.

Group of orthologs #155. Best score 536 bits
Score difference with first non-orthologous sequence - P.jiroveci:536 S.tridecemlineatus:536

L0PDD5              	100.00%		I3MQP5              	100.00%
Bootstrap support for L0PDD5 as seed ortholog is 100%.
Bootstrap support for I3MQP5 as seed ortholog is 100%.

Group of orthologs #156. Best score 535 bits
Score difference with first non-orthologous sequence - P.jiroveci:535 S.tridecemlineatus:535

L0PBR9              	100.00%		I3MG46              	100.00%
                    	       		I3M929              	59.40%
Bootstrap support for L0PBR9 as seed ortholog is 100%.
Bootstrap support for I3MG46 as seed ortholog is 100%.

Group of orthologs #157. Best score 533 bits
Score difference with first non-orthologous sequence - P.jiroveci:533 S.tridecemlineatus:255

L0PBW7              	100.00%		I3ML98              	100.00%
Bootstrap support for L0PBW7 as seed ortholog is 100%.
Bootstrap support for I3ML98 as seed ortholog is 99%.

Group of orthologs #158. Best score 529 bits
Score difference with first non-orthologous sequence - P.jiroveci:529 S.tridecemlineatus:325

L0PB12              	100.00%		I3M4C1              	100.00%
Bootstrap support for L0PB12 as seed ortholog is 100%.
Bootstrap support for I3M4C1 as seed ortholog is 100%.

Group of orthologs #159. Best score 529 bits
Score difference with first non-orthologous sequence - P.jiroveci:529 S.tridecemlineatus:333

L0PGT9              	100.00%		I3M0X0              	100.00%
Bootstrap support for L0PGT9 as seed ortholog is 100%.
Bootstrap support for I3M0X0 as seed ortholog is 100%.

Group of orthologs #160. Best score 529 bits
Score difference with first non-orthologous sequence - P.jiroveci:529 S.tridecemlineatus:242

L0P9D4              	100.00%		I3MK21              	100.00%
Bootstrap support for L0P9D4 as seed ortholog is 100%.
Bootstrap support for I3MK21 as seed ortholog is 100%.

Group of orthologs #161. Best score 527 bits
Score difference with first non-orthologous sequence - P.jiroveci:409 S.tridecemlineatus:285

L0P7V6              	100.00%		I3MJH2              	100.00%
                    	       		I3NEW0              	78.49%
Bootstrap support for L0P7V6 as seed ortholog is 100%.
Bootstrap support for I3MJH2 as seed ortholog is 100%.

Group of orthologs #162. Best score 524 bits
Score difference with first non-orthologous sequence - P.jiroveci:524 S.tridecemlineatus:294

L0P9I8              	100.00%		I3LYR9              	100.00%
                    	       		I3LZN9              	23.99%
Bootstrap support for L0P9I8 as seed ortholog is 100%.
Bootstrap support for I3LYR9 as seed ortholog is 100%.

Group of orthologs #163. Best score 521 bits
Score difference with first non-orthologous sequence - P.jiroveci:521 S.tridecemlineatus:353

L0PBI1              	100.00%		I3MD68              	100.00%
                    	       		I3LZ31              	41.34%
                    	       		I3MNT2              	13.37%
Bootstrap support for L0PBI1 as seed ortholog is 100%.
Bootstrap support for I3MD68 as seed ortholog is 100%.

Group of orthologs #164. Best score 521 bits
Score difference with first non-orthologous sequence - P.jiroveci:521 S.tridecemlineatus:219

L0P8E8              	100.00%		I3M7H6              	100.00%
L0PEB0              	100.00%		
Bootstrap support for L0P8E8 as seed ortholog is 100%.
Bootstrap support for L0PEB0 as seed ortholog is 100%.
Bootstrap support for I3M7H6 as seed ortholog is 99%.

Group of orthologs #165. Best score 520 bits
Score difference with first non-orthologous sequence - P.jiroveci:520 S.tridecemlineatus:263

L0PET9              	100.00%		I3MC74              	100.00%
Bootstrap support for L0PET9 as seed ortholog is 100%.
Bootstrap support for I3MC74 as seed ortholog is 100%.

Group of orthologs #166. Best score 519 bits
Score difference with first non-orthologous sequence - P.jiroveci:519 S.tridecemlineatus:163

L0P802              	100.00%		I3MZM6              	100.00%
                    	       		I3MFF8              	46.32%
                    	       		I3M2V7              	40.65%
Bootstrap support for L0P802 as seed ortholog is 100%.
Bootstrap support for I3MZM6 as seed ortholog is 99%.

Group of orthologs #167. Best score 519 bits
Score difference with first non-orthologous sequence - P.jiroveci:519 S.tridecemlineatus:342

L0P7Y5              	100.00%		I3M9R5              	100.00%
Bootstrap support for L0P7Y5 as seed ortholog is 100%.
Bootstrap support for I3M9R5 as seed ortholog is 100%.

Group of orthologs #168. Best score 518 bits
Score difference with first non-orthologous sequence - P.jiroveci:518 S.tridecemlineatus:518

L0PCX1              	100.00%		I3MP56              	100.00%
                    	       		I3MKW9              	20.43%
Bootstrap support for L0PCX1 as seed ortholog is 100%.
Bootstrap support for I3MP56 as seed ortholog is 100%.

Group of orthologs #169. Best score 515 bits
Score difference with first non-orthologous sequence - P.jiroveci:262 S.tridecemlineatus:296

L0PEP2              	100.00%		I3MG47              	100.00%
Bootstrap support for L0PEP2 as seed ortholog is 100%.
Bootstrap support for I3MG47 as seed ortholog is 100%.

Group of orthologs #170. Best score 514 bits
Score difference with first non-orthologous sequence - P.jiroveci:514 S.tridecemlineatus:514

L0PAN9              	100.00%		I3MDW5              	100.00%
L0PID8              	83.00%		
Bootstrap support for L0PAN9 as seed ortholog is 100%.
Bootstrap support for I3MDW5 as seed ortholog is 100%.

Group of orthologs #171. Best score 514 bits
Score difference with first non-orthologous sequence - P.jiroveci:514 S.tridecemlineatus:145

L0P9A8              	100.00%		I3MGM5              	100.00%
L0PHB9              	76.12%		
Bootstrap support for L0P9A8 as seed ortholog is 100%.
Bootstrap support for I3MGM5 as seed ortholog is 99%.

Group of orthologs #172. Best score 512 bits
Score difference with first non-orthologous sequence - P.jiroveci:138 S.tridecemlineatus:348

L0PBP3              	100.00%		I3MXL6              	100.00%
                    	       		I3M3B2              	47.02%
Bootstrap support for L0PBP3 as seed ortholog is 99%.
Bootstrap support for I3MXL6 as seed ortholog is 100%.

Group of orthologs #173. Best score 510 bits
Score difference with first non-orthologous sequence - P.jiroveci:510 S.tridecemlineatus:510

L0PCP1              	100.00%		I3MA63              	100.00%
Bootstrap support for L0PCP1 as seed ortholog is 100%.
Bootstrap support for I3MA63 as seed ortholog is 100%.

Group of orthologs #174. Best score 506 bits
Score difference with first non-orthologous sequence - P.jiroveci:506 S.tridecemlineatus:431

L0PD32              	100.00%		I3M2M0              	100.00%
L0PD26              	94.20%		
Bootstrap support for L0PD32 as seed ortholog is 100%.
Bootstrap support for I3M2M0 as seed ortholog is 100%.

Group of orthologs #175. Best score 506 bits
Score difference with first non-orthologous sequence - P.jiroveci:506 S.tridecemlineatus:199

L0PE41              	100.00%		I3MT33              	100.00%
Bootstrap support for L0PE41 as seed ortholog is 100%.
Bootstrap support for I3MT33 as seed ortholog is 99%.

Group of orthologs #176. Best score 505 bits
Score difference with first non-orthologous sequence - P.jiroveci:505 S.tridecemlineatus:444

L0P7N1              	100.00%		I3MPQ0              	100.00%
                    	       		I3NGZ5              	85.14%
Bootstrap support for L0P7N1 as seed ortholog is 100%.
Bootstrap support for I3MPQ0 as seed ortholog is 100%.

Group of orthologs #177. Best score 505 bits
Score difference with first non-orthologous sequence - P.jiroveci:43 S.tridecemlineatus:258

L0PF72              	100.00%		I3MZB5              	100.00%
                    	       		I3MAU5              	14.98%
Bootstrap support for L0PF72 as seed ortholog is 77%.
Bootstrap support for I3MZB5 as seed ortholog is 100%.

Group of orthologs #178. Best score 504 bits
Score difference with first non-orthologous sequence - P.jiroveci:504 S.tridecemlineatus:411

L0PB50              	100.00%		I3M8U9              	100.00%
Bootstrap support for L0PB50 as seed ortholog is 100%.
Bootstrap support for I3M8U9 as seed ortholog is 100%.

Group of orthologs #179. Best score 503 bits
Score difference with first non-orthologous sequence - P.jiroveci:503 S.tridecemlineatus:44

L0P890              	100.00%		I3M5X0              	100.00%
                    	       		I3LZ40              	38.86%
Bootstrap support for L0P890 as seed ortholog is 100%.
Bootstrap support for I3M5X0 as seed ortholog is 89%.

Group of orthologs #180. Best score 503 bits
Score difference with first non-orthologous sequence - P.jiroveci:503 S.tridecemlineatus:503

L0PBG8              	100.00%		I3M220              	100.00%
Bootstrap support for L0PBG8 as seed ortholog is 100%.
Bootstrap support for I3M220 as seed ortholog is 100%.

Group of orthologs #181. Best score 503 bits
Score difference with first non-orthologous sequence - P.jiroveci:147 S.tridecemlineatus:167

L0PGE8              	100.00%		I3M128              	100.00%
Bootstrap support for L0PGE8 as seed ortholog is 99%.
Bootstrap support for I3M128 as seed ortholog is 99%.

Group of orthologs #182. Best score 502 bits
Score difference with first non-orthologous sequence - P.jiroveci:502 S.tridecemlineatus:502

L0PA85              	100.00%		I3LWZ8              	100.00%
Bootstrap support for L0PA85 as seed ortholog is 100%.
Bootstrap support for I3LWZ8 as seed ortholog is 100%.

Group of orthologs #183. Best score 502 bits
Score difference with first non-orthologous sequence - P.jiroveci:502 S.tridecemlineatus:380

L0PDG5              	100.00%		I3MEX2              	100.00%
Bootstrap support for L0PDG5 as seed ortholog is 100%.
Bootstrap support for I3MEX2 as seed ortholog is 100%.

Group of orthologs #184. Best score 500 bits
Score difference with first non-orthologous sequence - P.jiroveci:436 S.tridecemlineatus:432

L0P992              	100.00%		I3MIE2              	100.00%
                    	       		I3M161              	76.61%
Bootstrap support for L0P992 as seed ortholog is 100%.
Bootstrap support for I3MIE2 as seed ortholog is 100%.

Group of orthologs #185. Best score 500 bits
Score difference with first non-orthologous sequence - P.jiroveci:500 S.tridecemlineatus:500

L0PAS3              	100.00%		I3MH50              	100.00%
                    	       		I3MAX2              	23.19%
Bootstrap support for L0PAS3 as seed ortholog is 100%.
Bootstrap support for I3MH50 as seed ortholog is 100%.

Group of orthologs #186. Best score 493 bits
Score difference with first non-orthologous sequence - P.jiroveci:493 S.tridecemlineatus:272

L0PC44              	100.00%		I3MFQ7              	100.00%
Bootstrap support for L0PC44 as seed ortholog is 100%.
Bootstrap support for I3MFQ7 as seed ortholog is 99%.

Group of orthologs #187. Best score 492 bits
Score difference with first non-orthologous sequence - P.jiroveci:492 S.tridecemlineatus:492

L0P7P1              	100.00%		I3M3J7              	100.00%
Bootstrap support for L0P7P1 as seed ortholog is 100%.
Bootstrap support for I3M3J7 as seed ortholog is 100%.

Group of orthologs #188. Best score 492 bits
Score difference with first non-orthologous sequence - P.jiroveci:492 S.tridecemlineatus:328

L0PFQ5              	100.00%		I3MHK7              	100.00%
Bootstrap support for L0PFQ5 as seed ortholog is 100%.
Bootstrap support for I3MHK7 as seed ortholog is 100%.

Group of orthologs #189. Best score 491 bits
Score difference with first non-orthologous sequence - P.jiroveci:491 S.tridecemlineatus:491

L0PBP8              	100.00%		I3MEY5              	100.00%
Bootstrap support for L0PBP8 as seed ortholog is 100%.
Bootstrap support for I3MEY5 as seed ortholog is 100%.

Group of orthologs #190. Best score 490 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 S.tridecemlineatus:295

L0PAI4              	100.00%		I3LYN1              	100.00%
                    	       		I3MCI0              	65.98%
                    	       		I3MKY0              	56.69%
Bootstrap support for L0PAI4 as seed ortholog is 84%.
Bootstrap support for I3LYN1 as seed ortholog is 100%.

Group of orthologs #191. Best score 490 bits
Score difference with first non-orthologous sequence - P.jiroveci:369 S.tridecemlineatus:356

L0PE30              	100.00%		I3MC13              	100.00%
                    	       		I3M2G9              	21.07%
Bootstrap support for L0PE30 as seed ortholog is 100%.
Bootstrap support for I3MC13 as seed ortholog is 100%.

Group of orthologs #192. Best score 490 bits
Score difference with first non-orthologous sequence - P.jiroveci:313 S.tridecemlineatus:490

L0PFN9              	100.00%		I3MQS5              	100.00%
Bootstrap support for L0PFN9 as seed ortholog is 100%.
Bootstrap support for I3MQS5 as seed ortholog is 100%.

Group of orthologs #193. Best score 489 bits
Score difference with first non-orthologous sequence - P.jiroveci:489 S.tridecemlineatus:435

L0P9G2              	100.00%		I3MI28              	100.00%
Bootstrap support for L0P9G2 as seed ortholog is 100%.
Bootstrap support for I3MI28 as seed ortholog is 100%.

Group of orthologs #194. Best score 489 bits
Score difference with first non-orthologous sequence - P.jiroveci:437 S.tridecemlineatus:400

L0PBU6              	100.00%		I3MWM8              	100.00%
Bootstrap support for L0PBU6 as seed ortholog is 100%.
Bootstrap support for I3MWM8 as seed ortholog is 100%.

Group of orthologs #195. Best score 487 bits
Score difference with first non-orthologous sequence - P.jiroveci:400 S.tridecemlineatus:330

L0PG55              	100.00%		I3M7Y1              	100.00%
                    	       		I3M479              	76.27%
Bootstrap support for L0PG55 as seed ortholog is 100%.
Bootstrap support for I3M7Y1 as seed ortholog is 100%.

Group of orthologs #196. Best score 487 bits
Score difference with first non-orthologous sequence - P.jiroveci:256 S.tridecemlineatus:263

L0P718              	100.00%		I3LY74              	100.00%
Bootstrap support for L0P718 as seed ortholog is 100%.
Bootstrap support for I3LY74 as seed ortholog is 100%.

Group of orthologs #197. Best score 487 bits
Score difference with first non-orthologous sequence - P.jiroveci:316 S.tridecemlineatus:487

L0PEL0              	100.00%		I3LZT6              	100.00%
Bootstrap support for L0PEL0 as seed ortholog is 100%.
Bootstrap support for I3LZT6 as seed ortholog is 100%.

Group of orthologs #198. Best score 486 bits
Score difference with first non-orthologous sequence - P.jiroveci:145 S.tridecemlineatus:236

L0PAW8              	100.00%		I3M3A1              	100.00%
                    	       		I3MG48              	6.18%
Bootstrap support for L0PAW8 as seed ortholog is 99%.
Bootstrap support for I3M3A1 as seed ortholog is 100%.

Group of orthologs #199. Best score 486 bits
Score difference with first non-orthologous sequence - P.jiroveci:486 S.tridecemlineatus:486

L0PB35              	100.00%		I3M967              	100.00%
Bootstrap support for L0PB35 as seed ortholog is 100%.
Bootstrap support for I3M967 as seed ortholog is 100%.

Group of orthologs #200. Best score 485 bits
Score difference with first non-orthologous sequence - P.jiroveci:485 S.tridecemlineatus:485

L0PAP1              	100.00%		I3LWZ0              	100.00%
Bootstrap support for L0PAP1 as seed ortholog is 100%.
Bootstrap support for I3LWZ0 as seed ortholog is 100%.

Group of orthologs #201. Best score 484 bits
Score difference with first non-orthologous sequence - P.jiroveci:484 S.tridecemlineatus:484

L0PCY5              	100.00%		I3LZL2              	100.00%
                    	       		I3LZL7              	45.35%
Bootstrap support for L0PCY5 as seed ortholog is 100%.
Bootstrap support for I3LZL2 as seed ortholog is 100%.

Group of orthologs #202. Best score 484 bits
Score difference with first non-orthologous sequence - P.jiroveci:484 S.tridecemlineatus:184

L0P8F1              	100.00%		I3MJ63              	100.00%
                    	       		I3N000              	80.53%
Bootstrap support for L0P8F1 as seed ortholog is 100%.
Bootstrap support for I3MJ63 as seed ortholog is 99%.

Group of orthologs #203. Best score 484 bits
Score difference with first non-orthologous sequence - P.jiroveci:484 S.tridecemlineatus:319

L0PAA4              	100.00%		I3MTQ4              	100.00%
Bootstrap support for L0PAA4 as seed ortholog is 100%.
Bootstrap support for I3MTQ4 as seed ortholog is 100%.

Group of orthologs #204. Best score 483 bits
Score difference with first non-orthologous sequence - P.jiroveci:269 S.tridecemlineatus:356

L0PF08              	100.00%		I3MI03              	100.00%
                    	       		I3MS66              	65.14%
                    	       		I3MQR1              	26.51%
Bootstrap support for L0PF08 as seed ortholog is 100%.
Bootstrap support for I3MI03 as seed ortholog is 100%.

Group of orthologs #205. Best score 481 bits
Score difference with first non-orthologous sequence - P.jiroveci:349 S.tridecemlineatus:194

L0PB67              	100.00%		I3LYE5              	100.00%
                    	       		I3MIC6              	28.78%
Bootstrap support for L0PB67 as seed ortholog is 100%.
Bootstrap support for I3LYE5 as seed ortholog is 99%.

Group of orthologs #206. Best score 481 bits
Score difference with first non-orthologous sequence - P.jiroveci:481 S.tridecemlineatus:144

L0PHY6              	100.00%		I3MJA5              	100.00%
Bootstrap support for L0PHY6 as seed ortholog is 100%.
Bootstrap support for I3MJA5 as seed ortholog is 99%.

Group of orthologs #207. Best score 481 bits
Score difference with first non-orthologous sequence - P.jiroveci:481 S.tridecemlineatus:169

L0PGH3              	100.00%		I3MR84              	100.00%
Bootstrap support for L0PGH3 as seed ortholog is 100%.
Bootstrap support for I3MR84 as seed ortholog is 99%.

Group of orthologs #208. Best score 478 bits
Score difference with first non-orthologous sequence - P.jiroveci:478 S.tridecemlineatus:478

L0PFZ9              	100.00%		I3MF06              	100.00%
                    	       		I3MNR8              	32.12%
Bootstrap support for L0PFZ9 as seed ortholog is 100%.
Bootstrap support for I3MF06 as seed ortholog is 100%.

Group of orthologs #209. Best score 478 bits
Score difference with first non-orthologous sequence - P.jiroveci:347 S.tridecemlineatus:265

L0PC38              	100.00%		I3MJH8              	100.00%
Bootstrap support for L0PC38 as seed ortholog is 100%.
Bootstrap support for I3MJH8 as seed ortholog is 100%.

Group of orthologs #210. Best score 477 bits
Score difference with first non-orthologous sequence - P.jiroveci:477 S.tridecemlineatus:477

L0PFC2              	100.00%		I3M2Y3              	100.00%
Bootstrap support for L0PFC2 as seed ortholog is 100%.
Bootstrap support for I3M2Y3 as seed ortholog is 100%.

Group of orthologs #211. Best score 476 bits
Score difference with first non-orthologous sequence - P.jiroveci:476 S.tridecemlineatus:476

L0PDC9              	100.00%		I3MLV3              	100.00%
                    	       		I3N5R7              	56.33%
Bootstrap support for L0PDC9 as seed ortholog is 100%.
Bootstrap support for I3MLV3 as seed ortholog is 100%.

Group of orthologs #212. Best score 476 bits
Score difference with first non-orthologous sequence - P.jiroveci:476 S.tridecemlineatus:387

L0P921              	100.00%		I3MA10              	100.00%
Bootstrap support for L0P921 as seed ortholog is 100%.
Bootstrap support for I3MA10 as seed ortholog is 100%.

Group of orthologs #213. Best score 471 bits
Score difference with first non-orthologous sequence - P.jiroveci:281 S.tridecemlineatus:156

L0PB83              	100.00%		I3MHG5              	100.00%
Bootstrap support for L0PB83 as seed ortholog is 100%.
Bootstrap support for I3MHG5 as seed ortholog is 99%.

Group of orthologs #214. Best score 469 bits
Score difference with first non-orthologous sequence - P.jiroveci:469 S.tridecemlineatus:469

L0PG96              	100.00%		I3M618              	100.00%
Bootstrap support for L0PG96 as seed ortholog is 100%.
Bootstrap support for I3M618 as seed ortholog is 100%.

Group of orthologs #215. Best score 468 bits
Score difference with first non-orthologous sequence - P.jiroveci:468 S.tridecemlineatus:423

L0P9V7              	100.00%		I3M0A9              	100.00%
                    	       		I3MNF8              	34.15%
Bootstrap support for L0P9V7 as seed ortholog is 100%.
Bootstrap support for I3M0A9 as seed ortholog is 100%.

Group of orthologs #216. Best score 468 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 S.tridecemlineatus:346

L0PFW2              	100.00%		I3NEE9              	100.00%
Bootstrap support for L0PFW2 as seed ortholog is 99%.
Bootstrap support for I3NEE9 as seed ortholog is 100%.

Group of orthologs #217. Best score 465 bits
Score difference with first non-orthologous sequence - P.jiroveci:354 S.tridecemlineatus:319

L0P8C2              	100.00%		I3M7E4              	100.00%
Bootstrap support for L0P8C2 as seed ortholog is 100%.
Bootstrap support for I3M7E4 as seed ortholog is 100%.

Group of orthologs #218. Best score 464 bits
Score difference with first non-orthologous sequence - P.jiroveci:464 S.tridecemlineatus:405

L0P9C8              	100.00%		I3LXC4              	100.00%
Bootstrap support for L0P9C8 as seed ortholog is 100%.
Bootstrap support for I3LXC4 as seed ortholog is 100%.

Group of orthologs #219. Best score 464 bits
Score difference with first non-orthologous sequence - P.jiroveci:464 S.tridecemlineatus:464

L0PCS3              	100.00%		I3M5Q1              	100.00%
Bootstrap support for L0PCS3 as seed ortholog is 100%.
Bootstrap support for I3M5Q1 as seed ortholog is 100%.

Group of orthologs #220. Best score 463 bits
Score difference with first non-orthologous sequence - P.jiroveci:463 S.tridecemlineatus:463

L0PED9              	100.00%		I3LZB1              	100.00%
Bootstrap support for L0PED9 as seed ortholog is 100%.
Bootstrap support for I3LZB1 as seed ortholog is 100%.

Group of orthologs #221. Best score 463 bits
Score difference with first non-orthologous sequence - P.jiroveci:463 S.tridecemlineatus:463

L0PBV8              	100.00%		I3M9L0              	100.00%
Bootstrap support for L0PBV8 as seed ortholog is 100%.
Bootstrap support for I3M9L0 as seed ortholog is 100%.

Group of orthologs #222. Best score 463 bits
Score difference with first non-orthologous sequence - P.jiroveci:390 S.tridecemlineatus:330

L0P8N1              	100.00%		I3MNT1              	100.00%
Bootstrap support for L0P8N1 as seed ortholog is 100%.
Bootstrap support for I3MNT1 as seed ortholog is 100%.

Group of orthologs #223. Best score 463 bits
Score difference with first non-orthologous sequence - P.jiroveci:463 S.tridecemlineatus:463

L0PDM3              	100.00%		I3N5P3              	100.00%
Bootstrap support for L0PDM3 as seed ortholog is 100%.
Bootstrap support for I3N5P3 as seed ortholog is 100%.

Group of orthologs #224. Best score 462 bits
Score difference with first non-orthologous sequence - P.jiroveci:462 S.tridecemlineatus:462

L0PFR4              	100.00%		I3MC21              	100.00%
                    	       		I3M1Z0              	20.90%
Bootstrap support for L0PFR4 as seed ortholog is 100%.
Bootstrap support for I3MC21 as seed ortholog is 100%.

Group of orthologs #225. Best score 460 bits
Score difference with first non-orthologous sequence - P.jiroveci:460 S.tridecemlineatus:460

L0PGB8              	100.00%		I3M2A6              	100.00%
Bootstrap support for L0PGB8 as seed ortholog is 100%.
Bootstrap support for I3M2A6 as seed ortholog is 100%.

Group of orthologs #226. Best score 459 bits
Score difference with first non-orthologous sequence - P.jiroveci:319 S.tridecemlineatus:306

L0PDA0              	100.00%		I3MQJ8              	100.00%
                    	       		I3MSV4              	46.32%
Bootstrap support for L0PDA0 as seed ortholog is 100%.
Bootstrap support for I3MQJ8 as seed ortholog is 100%.

Group of orthologs #227. Best score 459 bits
Score difference with first non-orthologous sequence - P.jiroveci:349 S.tridecemlineatus:459

L0P7R1              	100.00%		I3M7N3              	100.00%
Bootstrap support for L0P7R1 as seed ortholog is 100%.
Bootstrap support for I3M7N3 as seed ortholog is 100%.

Group of orthologs #228. Best score 458 bits
Score difference with first non-orthologous sequence - P.jiroveci:458 S.tridecemlineatus:458

L0P969              	100.00%		I3MD84              	100.00%
Bootstrap support for L0P969 as seed ortholog is 100%.
Bootstrap support for I3MD84 as seed ortholog is 100%.

Group of orthologs #229. Best score 456 bits
Score difference with first non-orthologous sequence - P.jiroveci:456 S.tridecemlineatus:154

L0P8R6              	100.00%		I3MP50              	100.00%
Bootstrap support for L0P8R6 as seed ortholog is 100%.
Bootstrap support for I3MP50 as seed ortholog is 99%.

Group of orthologs #230. Best score 454 bits
Score difference with first non-orthologous sequence - P.jiroveci:454 S.tridecemlineatus:454

L0PC82              	100.00%		I3M6J1              	100.00%
                    	       		I3LZF8              	32.17%
Bootstrap support for L0PC82 as seed ortholog is 100%.
Bootstrap support for I3M6J1 as seed ortholog is 100%.

Group of orthologs #231. Best score 452 bits
Score difference with first non-orthologous sequence - P.jiroveci:452 S.tridecemlineatus:452

L0PF49              	100.00%		I3M811              	100.00%
Bootstrap support for L0PF49 as seed ortholog is 100%.
Bootstrap support for I3M811 as seed ortholog is 100%.

Group of orthologs #232. Best score 449 bits
Score difference with first non-orthologous sequence - P.jiroveci:449 S.tridecemlineatus:449

L0PER3              	100.00%		I3MC78              	100.00%
Bootstrap support for L0PER3 as seed ortholog is 100%.
Bootstrap support for I3MC78 as seed ortholog is 100%.

Group of orthologs #233. Best score 448 bits
Score difference with first non-orthologous sequence - P.jiroveci:331 S.tridecemlineatus:186

L0PEM1              	100.00%		I3M2Q1              	100.00%
Bootstrap support for L0PEM1 as seed ortholog is 100%.
Bootstrap support for I3M2Q1 as seed ortholog is 100%.

Group of orthologs #234. Best score 446 bits
Score difference with first non-orthologous sequence - P.jiroveci:446 S.tridecemlineatus:446

L0PDS0              	100.00%		I3M9W4              	100.00%
Bootstrap support for L0PDS0 as seed ortholog is 100%.
Bootstrap support for I3M9W4 as seed ortholog is 100%.

Group of orthologs #235. Best score 445 bits
Score difference with first non-orthologous sequence - P.jiroveci:445 S.tridecemlineatus:445

L0P9C9              	100.00%		I3LYB1              	100.00%
Bootstrap support for L0P9C9 as seed ortholog is 100%.
Bootstrap support for I3LYB1 as seed ortholog is 100%.

Group of orthologs #236. Best score 444 bits
Score difference with first non-orthologous sequence - P.jiroveci:444 S.tridecemlineatus:444

L0PAE9              	100.00%		I3MRE7              	100.00%
Bootstrap support for L0PAE9 as seed ortholog is 100%.
Bootstrap support for I3MRE7 as seed ortholog is 100%.

Group of orthologs #237. Best score 443 bits
Score difference with first non-orthologous sequence - P.jiroveci:353 S.tridecemlineatus:261

L0PC98              	100.00%		I3LWP6              	100.00%
Bootstrap support for L0PC98 as seed ortholog is 100%.
Bootstrap support for I3LWP6 as seed ortholog is 100%.

Group of orthologs #238. Best score 442 bits
Score difference with first non-orthologous sequence - P.jiroveci:245 S.tridecemlineatus:135

L0PFB1              	100.00%		I3MFA4              	100.00%
                    	       		I3MB35              	50.59%
Bootstrap support for L0PFB1 as seed ortholog is 100%.
Bootstrap support for I3MFA4 as seed ortholog is 99%.

Group of orthologs #239. Best score 441 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 S.tridecemlineatus:441

L0PFS3              	100.00%		I3MAR7              	100.00%
Bootstrap support for L0PFS3 as seed ortholog is 99%.
Bootstrap support for I3MAR7 as seed ortholog is 100%.

Group of orthologs #240. Best score 440 bits
Score difference with first non-orthologous sequence - P.jiroveci:344 S.tridecemlineatus:266

L0PAL3              	100.00%		I3MBA2              	100.00%
Bootstrap support for L0PAL3 as seed ortholog is 100%.
Bootstrap support for I3MBA2 as seed ortholog is 100%.

Group of orthologs #241. Best score 440 bits
Score difference with first non-orthologous sequence - P.jiroveci:440 S.tridecemlineatus:440

L0P6X8              	100.00%		I3MLE2              	100.00%
Bootstrap support for L0P6X8 as seed ortholog is 100%.
Bootstrap support for I3MLE2 as seed ortholog is 100%.

Group of orthologs #242. Best score 439 bits
Score difference with first non-orthologous sequence - P.jiroveci:439 S.tridecemlineatus:439

L0P9I4              	100.00%		I3MLZ5              	100.00%
Bootstrap support for L0P9I4 as seed ortholog is 100%.
Bootstrap support for I3MLZ5 as seed ortholog is 100%.

Group of orthologs #243. Best score 438 bits
Score difference with first non-orthologous sequence - P.jiroveci:438 S.tridecemlineatus:438

L0PA45              	100.00%		I3MPU0              	100.00%
Bootstrap support for L0PA45 as seed ortholog is 100%.
Bootstrap support for I3MPU0 as seed ortholog is 100%.

Group of orthologs #244. Best score 437 bits
Score difference with first non-orthologous sequence - P.jiroveci:288 S.tridecemlineatus:152

L0PGV4              	100.00%		I3MGG5              	100.00%
                    	       		I3MMX5              	86.48%
Bootstrap support for L0PGV4 as seed ortholog is 100%.
Bootstrap support for I3MGG5 as seed ortholog is 100%.

Group of orthologs #245. Best score 437 bits
Score difference with first non-orthologous sequence - P.jiroveci:437 S.tridecemlineatus:437

L0P6R7              	100.00%		I3MSY2              	100.00%
Bootstrap support for L0P6R7 as seed ortholog is 100%.
Bootstrap support for I3MSY2 as seed ortholog is 100%.

Group of orthologs #246. Best score 435 bits
Score difference with first non-orthologous sequence - P.jiroveci:298 S.tridecemlineatus:46

L0P9H5              	100.00%		I3MJI3              	100.00%
L0P8S4              	54.09%		I3MDT2              	40.84%
                    	       		I3MJQ4              	18.07%
                    	       		I3MVT5              	13.00%
                    	       		I3MJ52              	6.93%
                    	       		I3M1P9              	6.68%
Bootstrap support for L0P9H5 as seed ortholog is 100%.
Bootstrap support for I3MJI3 as seed ortholog is 97%.

Group of orthologs #247. Best score 435 bits
Score difference with first non-orthologous sequence - P.jiroveci:349 S.tridecemlineatus:366

L0PFE7              	100.00%		I3M3X4              	100.00%
Bootstrap support for L0PFE7 as seed ortholog is 100%.
Bootstrap support for I3M3X4 as seed ortholog is 100%.

Group of orthologs #248. Best score 434 bits
Score difference with first non-orthologous sequence - P.jiroveci:434 S.tridecemlineatus:434

L0PB32              	100.00%		I3M9H2              	100.00%
Bootstrap support for L0PB32 as seed ortholog is 100%.
Bootstrap support for I3M9H2 as seed ortholog is 100%.

Group of orthologs #249. Best score 433 bits
Score difference with first non-orthologous sequence - P.jiroveci:433 S.tridecemlineatus:433

L0PC09              	100.00%		I3N195              	100.00%
Bootstrap support for L0PC09 as seed ortholog is 100%.
Bootstrap support for I3N195 as seed ortholog is 100%.

Group of orthologs #250. Best score 431 bits
Score difference with first non-orthologous sequence - P.jiroveci:431 S.tridecemlineatus:431

L0PEZ0              	100.00%		I3N5A8              	100.00%
Bootstrap support for L0PEZ0 as seed ortholog is 100%.
Bootstrap support for I3N5A8 as seed ortholog is 100%.

Group of orthologs #251. Best score 430 bits
Score difference with first non-orthologous sequence - P.jiroveci:430 S.tridecemlineatus:430

L0PFI9              	100.00%		I3M0K3              	100.00%
Bootstrap support for L0PFI9 as seed ortholog is 100%.
Bootstrap support for I3M0K3 as seed ortholog is 100%.

Group of orthologs #252. Best score 430 bits
Score difference with first non-orthologous sequence - P.jiroveci:430 S.tridecemlineatus:430

L0P9J7              	100.00%		I3M8R2              	100.00%
Bootstrap support for L0P9J7 as seed ortholog is 100%.
Bootstrap support for I3M8R2 as seed ortholog is 100%.

Group of orthologs #253. Best score 429 bits
Score difference with first non-orthologous sequence - P.jiroveci:429 S.tridecemlineatus:212

L0P6W8              	100.00%		I3M3K7              	100.00%
L0PH46              	100.00%		
Bootstrap support for L0P6W8 as seed ortholog is 100%.
Bootstrap support for L0PH46 as seed ortholog is 100%.
Bootstrap support for I3M3K7 as seed ortholog is 100%.

Group of orthologs #254. Best score 429 bits
Score difference with first non-orthologous sequence - P.jiroveci:429 S.tridecemlineatus:429

L0PEE3              	100.00%		I3NB15              	100.00%
                    	       		I3MB56              	46.72%
Bootstrap support for L0PEE3 as seed ortholog is 100%.
Bootstrap support for I3NB15 as seed ortholog is 100%.

Group of orthologs #255. Best score 425 bits
Score difference with first non-orthologous sequence - P.jiroveci:425 S.tridecemlineatus:425

L0P6T8              	100.00%		I3ML60              	100.00%
                    	       		I3MQW1              	40.53%
Bootstrap support for L0P6T8 as seed ortholog is 100%.
Bootstrap support for I3ML60 as seed ortholog is 100%.

Group of orthologs #256. Best score 425 bits
Score difference with first non-orthologous sequence - P.jiroveci:425 S.tridecemlineatus:117

L0PDM0              	100.00%		I3M940              	100.00%
Bootstrap support for L0PDM0 as seed ortholog is 100%.
Bootstrap support for I3M940 as seed ortholog is 97%.

Group of orthologs #257. Best score 425 bits
Score difference with first non-orthologous sequence - P.jiroveci:425 S.tridecemlineatus:425

L0PGU0              	100.00%		I3MM17              	100.00%
Bootstrap support for L0PGU0 as seed ortholog is 100%.
Bootstrap support for I3MM17 as seed ortholog is 100%.

Group of orthologs #258. Best score 423 bits
Score difference with first non-orthologous sequence - P.jiroveci:423 S.tridecemlineatus:348

L0PAL8              	100.00%		I3MML0              	100.00%
Bootstrap support for L0PAL8 as seed ortholog is 100%.
Bootstrap support for I3MML0 as seed ortholog is 100%.

Group of orthologs #259. Best score 422 bits
Score difference with first non-orthologous sequence - P.jiroveci:422 S.tridecemlineatus:422

L0PCQ7              	100.00%		I3MTF2              	100.00%
Bootstrap support for L0PCQ7 as seed ortholog is 100%.
Bootstrap support for I3MTF2 as seed ortholog is 100%.

Group of orthologs #260. Best score 422 bits
Score difference with first non-orthologous sequence - P.jiroveci:422 S.tridecemlineatus:338

L0P7Z6              	100.00%		I3NFD2              	100.00%
Bootstrap support for L0P7Z6 as seed ortholog is 100%.
Bootstrap support for I3NFD2 as seed ortholog is 100%.

Group of orthologs #261. Best score 421 bits
Score difference with first non-orthologous sequence - P.jiroveci:421 S.tridecemlineatus:421

L0PAH2              	100.00%		I3MIG0              	100.00%
Bootstrap support for L0PAH2 as seed ortholog is 100%.
Bootstrap support for I3MIG0 as seed ortholog is 100%.

Group of orthologs #262. Best score 419 bits
Score difference with first non-orthologous sequence - P.jiroveci:419 S.tridecemlineatus:419

L0PEE4              	100.00%		I3MA04              	100.00%
                    	       		I3MCD5              	52.19%
Bootstrap support for L0PEE4 as seed ortholog is 100%.
Bootstrap support for I3MA04 as seed ortholog is 100%.

Group of orthologs #263. Best score 419 bits
Score difference with first non-orthologous sequence - P.jiroveci:419 S.tridecemlineatus:337

L0P8X3              	100.00%		I3MA27              	100.00%
Bootstrap support for L0P8X3 as seed ortholog is 100%.
Bootstrap support for I3MA27 as seed ortholog is 100%.

Group of orthologs #264. Best score 416 bits
Score difference with first non-orthologous sequence - P.jiroveci:416 S.tridecemlineatus:312

L0PB23              	100.00%		I3LXD1              	100.00%
Bootstrap support for L0PB23 as seed ortholog is 100%.
Bootstrap support for I3LXD1 as seed ortholog is 100%.

Group of orthologs #265. Best score 416 bits
Score difference with first non-orthologous sequence - P.jiroveci:416 S.tridecemlineatus:243

L0PBE9              	100.00%		I3M207              	100.00%
Bootstrap support for L0PBE9 as seed ortholog is 100%.
Bootstrap support for I3M207 as seed ortholog is 100%.

Group of orthologs #266. Best score 415 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 S.tridecemlineatus:155

L0P6V9              	100.00%		I3M773              	100.00%
                    	       		I3MA44              	100.00%
                    	       		I3N6B7              	99.07%
                    	       		I3NFT1              	93.93%
Bootstrap support for L0P6V9 as seed ortholog is 99%.
Bootstrap support for I3M773 as seed ortholog is 100%.
Bootstrap support for I3MA44 as seed ortholog is 100%.

Group of orthologs #267. Best score 415 bits
Score difference with first non-orthologous sequence - P.jiroveci:29 S.tridecemlineatus:106

L0PAN3              	100.00%		I3MBB1              	100.00%
                    	       		I3MSP9              	12.24%
Bootstrap support for L0PAN3 as seed ortholog is 54%.
Alternative seed ortholog is L0PE81 (29 bits away from this cluster)
Bootstrap support for I3MBB1 as seed ortholog is 99%.

Group of orthologs #268. Best score 415 bits
Score difference with first non-orthologous sequence - P.jiroveci:415 S.tridecemlineatus:415

L0PEX5              	100.00%		I3M566              	100.00%
Bootstrap support for L0PEX5 as seed ortholog is 100%.
Bootstrap support for I3M566 as seed ortholog is 100%.

Group of orthologs #269. Best score 415 bits
Score difference with first non-orthologous sequence - P.jiroveci:415 S.tridecemlineatus:254

L0PA15              	100.00%		I3MBC0              	100.00%
Bootstrap support for L0PA15 as seed ortholog is 100%.
Bootstrap support for I3MBC0 as seed ortholog is 100%.

Group of orthologs #270. Best score 415 bits
Score difference with first non-orthologous sequence - P.jiroveci:415 S.tridecemlineatus:415

L0PGA8              	100.00%		I3MRS2              	100.00%
Bootstrap support for L0PGA8 as seed ortholog is 100%.
Bootstrap support for I3MRS2 as seed ortholog is 100%.

Group of orthologs #271. Best score 414 bits
Score difference with first non-orthologous sequence - P.jiroveci:414 S.tridecemlineatus:170

L0PGN1              	100.00%		I3M0F2              	100.00%
Bootstrap support for L0PGN1 as seed ortholog is 100%.
Bootstrap support for I3M0F2 as seed ortholog is 99%.

Group of orthologs #272. Best score 414 bits
Score difference with first non-orthologous sequence - P.jiroveci:414 S.tridecemlineatus:316

L0PF52              	100.00%		I3MA99              	100.00%
Bootstrap support for L0PF52 as seed ortholog is 100%.
Bootstrap support for I3MA99 as seed ortholog is 100%.

Group of orthologs #273. Best score 413 bits
Score difference with first non-orthologous sequence - P.jiroveci:356 S.tridecemlineatus:413

L0P7M4              	100.00%		I3NG95              	100.00%
L0PH62              	49.37%		I3MA30              	70.76%
Bootstrap support for L0P7M4 as seed ortholog is 100%.
Bootstrap support for I3NG95 as seed ortholog is 100%.

Group of orthologs #274. Best score 413 bits
Score difference with first non-orthologous sequence - P.jiroveci:413 S.tridecemlineatus:413

L0PHJ7              	100.00%		I3MXD0              	100.00%
Bootstrap support for L0PHJ7 as seed ortholog is 100%.
Bootstrap support for I3MXD0 as seed ortholog is 100%.

Group of orthologs #275. Best score 411 bits
Score difference with first non-orthologous sequence - P.jiroveci:411 S.tridecemlineatus:411

L0PB18              	100.00%		I3MYD9              	100.00%
Bootstrap support for L0PB18 as seed ortholog is 100%.
Bootstrap support for I3MYD9 as seed ortholog is 100%.

Group of orthologs #276. Best score 410 bits
Score difference with first non-orthologous sequence - P.jiroveci:410 S.tridecemlineatus:410

L0PFY1              	100.00%		I3M446              	100.00%
                    	       		I3MW58              	45.86%
Bootstrap support for L0PFY1 as seed ortholog is 100%.
Bootstrap support for I3M446 as seed ortholog is 100%.

Group of orthologs #277. Best score 410 bits
Score difference with first non-orthologous sequence - P.jiroveci:410 S.tridecemlineatus:410

L0P7S7              	100.00%		I3M5X6              	100.00%
Bootstrap support for L0P7S7 as seed ortholog is 100%.
Bootstrap support for I3M5X6 as seed ortholog is 100%.

Group of orthologs #278. Best score 409 bits
Score difference with first non-orthologous sequence - P.jiroveci:409 S.tridecemlineatus:281

L0PDT0              	100.00%		I3N6H2              	100.00%
Bootstrap support for L0PDT0 as seed ortholog is 100%.
Bootstrap support for I3N6H2 as seed ortholog is 100%.

Group of orthologs #279. Best score 407 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 S.tridecemlineatus:13

L0PAY3              	100.00%		I3M9I9              	100.00%
                    	       		I3LWC0              	31.40%
Bootstrap support for L0PAY3 as seed ortholog is 99%.
Bootstrap support for I3M9I9 as seed ortholog is 68%.
Alternative seed ortholog is I3MIV2 (13 bits away from this cluster)

Group of orthologs #280. Best score 407 bits
Score difference with first non-orthologous sequence - P.jiroveci:407 S.tridecemlineatus:407

L0PE52              	100.00%		I3M945              	100.00%
L0PIN5              	49.13%		
Bootstrap support for L0PE52 as seed ortholog is 100%.
Bootstrap support for I3M945 as seed ortholog is 100%.

Group of orthologs #281. Best score 407 bits
Score difference with first non-orthologous sequence - P.jiroveci:407 S.tridecemlineatus:407

L0PAN7              	100.00%		I3ME14              	100.00%
Bootstrap support for L0PAN7 as seed ortholog is 100%.
Bootstrap support for I3ME14 as seed ortholog is 100%.

Group of orthologs #282. Best score 405 bits
Score difference with first non-orthologous sequence - P.jiroveci:405 S.tridecemlineatus:198

L0PBF6              	100.00%		I3MAT7              	100.00%
                    	       		I3LZ73              	38.97%
Bootstrap support for L0PBF6 as seed ortholog is 100%.
Bootstrap support for I3MAT7 as seed ortholog is 100%.

Group of orthologs #283. Best score 405 bits
Score difference with first non-orthologous sequence - P.jiroveci:405 S.tridecemlineatus:180

L0P702              	100.00%		I3MLD8              	100.00%
                    	       		I3M1L8              	21.98%
Bootstrap support for L0P702 as seed ortholog is 100%.
Bootstrap support for I3MLD8 as seed ortholog is 99%.

Group of orthologs #284. Best score 404 bits
Score difference with first non-orthologous sequence - P.jiroveci:404 S.tridecemlineatus:404

L0P7D2              	100.00%		I3M001              	100.00%
Bootstrap support for L0P7D2 as seed ortholog is 100%.
Bootstrap support for I3M001 as seed ortholog is 100%.

Group of orthologs #285. Best score 404 bits
Score difference with first non-orthologous sequence - P.jiroveci:404 S.tridecemlineatus:404

L0P8Z3              	100.00%		I3LZE6              	100.00%
Bootstrap support for L0P8Z3 as seed ortholog is 100%.
Bootstrap support for I3LZE6 as seed ortholog is 100%.

Group of orthologs #286. Best score 404 bits
Score difference with first non-orthologous sequence - P.jiroveci:404 S.tridecemlineatus:78

L0PF23              	100.00%		I3NG88              	100.00%
Bootstrap support for L0PF23 as seed ortholog is 100%.
Bootstrap support for I3NG88 as seed ortholog is 95%.

Group of orthologs #287. Best score 403 bits
Score difference with first non-orthologous sequence - P.jiroveci:403 S.tridecemlineatus:220

L0PG48              	100.00%		I3N7W5              	100.00%
Bootstrap support for L0PG48 as seed ortholog is 100%.
Bootstrap support for I3N7W5 as seed ortholog is 100%.

Group of orthologs #288. Best score 402 bits
Score difference with first non-orthologous sequence - P.jiroveci:402 S.tridecemlineatus:169

L0PBM9              	100.00%		I3MNU1              	100.00%
Bootstrap support for L0PBM9 as seed ortholog is 100%.
Bootstrap support for I3MNU1 as seed ortholog is 99%.

Group of orthologs #289. Best score 400 bits
Score difference with first non-orthologous sequence - P.jiroveci:400 S.tridecemlineatus:214

L0P6Y2              	100.00%		I3MPJ3              	100.00%
Bootstrap support for L0P6Y2 as seed ortholog is 100%.
Bootstrap support for I3MPJ3 as seed ortholog is 100%.

Group of orthologs #290. Best score 399 bits
Score difference with first non-orthologous sequence - P.jiroveci:399 S.tridecemlineatus:188

L0PCP3              	100.00%		I3MGR3              	100.00%
Bootstrap support for L0PCP3 as seed ortholog is 100%.
Bootstrap support for I3MGR3 as seed ortholog is 99%.

Group of orthologs #291. Best score 399 bits
Score difference with first non-orthologous sequence - P.jiroveci:399 S.tridecemlineatus:399

L0PAB3              	100.00%		I3MVI1              	100.00%
Bootstrap support for L0PAB3 as seed ortholog is 100%.
Bootstrap support for I3MVI1 as seed ortholog is 100%.

Group of orthologs #292. Best score 398 bits
Score difference with first non-orthologous sequence - P.jiroveci:309 S.tridecemlineatus:294

L0PBY2              	100.00%		I3M5K7              	100.00%
                    	       		I3MF96              	25.00%
Bootstrap support for L0PBY2 as seed ortholog is 100%.
Bootstrap support for I3M5K7 as seed ortholog is 100%.

Group of orthologs #293. Best score 397 bits
Score difference with first non-orthologous sequence - P.jiroveci:306 S.tridecemlineatus:270

L0PA57              	100.00%		I3NDR3              	100.00%
Bootstrap support for L0PA57 as seed ortholog is 100%.
Bootstrap support for I3NDR3 as seed ortholog is 100%.

Group of orthologs #294. Best score 396 bits
Score difference with first non-orthologous sequence - P.jiroveci:396 S.tridecemlineatus:276

L0P6U6              	100.00%		I3MDX7              	100.00%
Bootstrap support for L0P6U6 as seed ortholog is 100%.
Bootstrap support for I3MDX7 as seed ortholog is 100%.

Group of orthologs #295. Best score 396 bits
Score difference with first non-orthologous sequence - P.jiroveci:396 S.tridecemlineatus:396

L0PIC6              	100.00%		I3M6M2              	100.00%
Bootstrap support for L0PIC6 as seed ortholog is 100%.
Bootstrap support for I3M6M2 as seed ortholog is 100%.

Group of orthologs #296. Best score 396 bits
Score difference with first non-orthologous sequence - P.jiroveci:396 S.tridecemlineatus:396

L0PFD9              	100.00%		I3M9Z1              	100.00%
Bootstrap support for L0PFD9 as seed ortholog is 100%.
Bootstrap support for I3M9Z1 as seed ortholog is 100%.

Group of orthologs #297. Best score 396 bits
Score difference with first non-orthologous sequence - P.jiroveci:396 S.tridecemlineatus:396

L0PB82              	100.00%		I3MNA3              	100.00%
Bootstrap support for L0PB82 as seed ortholog is 100%.
Bootstrap support for I3MNA3 as seed ortholog is 100%.

Group of orthologs #298. Best score 396 bits
Score difference with first non-orthologous sequence - P.jiroveci:396 S.tridecemlineatus:396

L0PI13              	100.00%		I3MN37              	100.00%
Bootstrap support for L0PI13 as seed ortholog is 100%.
Bootstrap support for I3MN37 as seed ortholog is 100%.

Group of orthologs #299. Best score 395 bits
Score difference with first non-orthologous sequence - P.jiroveci:395 S.tridecemlineatus:395

L0PE98              	100.00%		I3MG96              	100.00%
Bootstrap support for L0PE98 as seed ortholog is 100%.
Bootstrap support for I3MG96 as seed ortholog is 100%.

Group of orthologs #300. Best score 394 bits
Score difference with first non-orthologous sequence - P.jiroveci:394 S.tridecemlineatus:394

L0PAM5              	100.00%		I3LZ20              	100.00%
Bootstrap support for L0PAM5 as seed ortholog is 100%.
Bootstrap support for I3LZ20 as seed ortholog is 100%.

Group of orthologs #301. Best score 394 bits
Score difference with first non-orthologous sequence - P.jiroveci:394 S.tridecemlineatus:317

L0PCT5              	100.00%		I3N951              	100.00%
Bootstrap support for L0PCT5 as seed ortholog is 100%.
Bootstrap support for I3N951 as seed ortholog is 100%.

Group of orthologs #302. Best score 393 bits
Score difference with first non-orthologous sequence - P.jiroveci:393 S.tridecemlineatus:393

L0PCV8              	100.00%		I3MH45              	100.00%
Bootstrap support for L0PCV8 as seed ortholog is 100%.
Bootstrap support for I3MH45 as seed ortholog is 100%.

Group of orthologs #303. Best score 393 bits
Score difference with first non-orthologous sequence - P.jiroveci:393 S.tridecemlineatus:205

L0PEA7              	100.00%		I3NH62              	100.00%
Bootstrap support for L0PEA7 as seed ortholog is 100%.
Bootstrap support for I3NH62 as seed ortholog is 100%.

Group of orthologs #304. Best score 392 bits
Score difference with first non-orthologous sequence - P.jiroveci:392 S.tridecemlineatus:392

L0PB68              	100.00%		I3NCM4              	100.00%
Bootstrap support for L0PB68 as seed ortholog is 100%.
Bootstrap support for I3NCM4 as seed ortholog is 100%.

Group of orthologs #305. Best score 390 bits
Score difference with first non-orthologous sequence - P.jiroveci:309 S.tridecemlineatus:143

L0P942              	100.00%		I3MJ33              	100.00%
L0P7J6              	58.09%		I3M7T9              	8.40%
                    	       		I3LW17              	6.82%
Bootstrap support for L0P942 as seed ortholog is 100%.
Bootstrap support for I3MJ33 as seed ortholog is 99%.

Group of orthologs #306. Best score 390 bits
Score difference with first non-orthologous sequence - P.jiroveci:73 S.tridecemlineatus:51

L0PA13              	100.00%		I3M5A7              	100.00%
Bootstrap support for L0PA13 as seed ortholog is 90%.
Bootstrap support for I3M5A7 as seed ortholog is 81%.

Group of orthologs #307. Best score 390 bits
Score difference with first non-orthologous sequence - P.jiroveci:190 S.tridecemlineatus:183

L0PC99              	100.00%		I3M958              	100.00%
Bootstrap support for L0PC99 as seed ortholog is 99%.
Bootstrap support for I3M958 as seed ortholog is 99%.

Group of orthologs #308. Best score 388 bits
Score difference with first non-orthologous sequence - P.jiroveci:388 S.tridecemlineatus:388

L0PEY9              	100.00%		I3M9N4              	100.00%
Bootstrap support for L0PEY9 as seed ortholog is 100%.
Bootstrap support for I3M9N4 as seed ortholog is 100%.

Group of orthologs #309. Best score 387 bits
Score difference with first non-orthologous sequence - P.jiroveci:387 S.tridecemlineatus:295

L0PBI2              	100.00%		I3MJC6              	100.00%
Bootstrap support for L0PBI2 as seed ortholog is 100%.
Bootstrap support for I3MJC6 as seed ortholog is 100%.

Group of orthologs #310. Best score 386 bits
Score difference with first non-orthologous sequence - P.jiroveci:386 S.tridecemlineatus:386

L0PID0              	100.00%		I3MK72              	100.00%
Bootstrap support for L0PID0 as seed ortholog is 100%.
Bootstrap support for I3MK72 as seed ortholog is 100%.

Group of orthologs #311. Best score 386 bits
Score difference with first non-orthologous sequence - P.jiroveci:386 S.tridecemlineatus:62

L0PA26              	100.00%		I3NFI1              	100.00%
Bootstrap support for L0PA26 as seed ortholog is 100%.
Bootstrap support for I3NFI1 as seed ortholog is 96%.

Group of orthologs #312. Best score 385 bits
Score difference with first non-orthologous sequence - P.jiroveci:187 S.tridecemlineatus:385

L0PBH6              	100.00%		I3MG75              	100.00%
                    	       		I3M854              	39.24%
                    	       		I3MQX9              	38.70%
                    	       		I3MF04              	9.47%
Bootstrap support for L0PBH6 as seed ortholog is 100%.
Bootstrap support for I3MG75 as seed ortholog is 100%.

Group of orthologs #313. Best score 385 bits
Score difference with first non-orthologous sequence - P.jiroveci:385 S.tridecemlineatus:385

L0PFP6              	100.00%		I3MM23              	100.00%
Bootstrap support for L0PFP6 as seed ortholog is 100%.
Bootstrap support for I3MM23 as seed ortholog is 100%.

Group of orthologs #314. Best score 385 bits
Score difference with first non-orthologous sequence - P.jiroveci:385 S.tridecemlineatus:172

L0P9R8              	100.00%		I3NG69              	100.00%
Bootstrap support for L0P9R8 as seed ortholog is 100%.
Bootstrap support for I3NG69 as seed ortholog is 99%.

Group of orthologs #315. Best score 383 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 S.tridecemlineatus:199

L0PGJ9              	100.00%		I3M5M4              	100.00%
                    	       		I3MAD8              	50.45%
                    	       		I3N6P9              	20.72%
Bootstrap support for L0PGJ9 as seed ortholog is 99%.
Bootstrap support for I3M5M4 as seed ortholog is 100%.

Group of orthologs #316. Best score 383 bits
Score difference with first non-orthologous sequence - P.jiroveci:289 S.tridecemlineatus:253

L0P7Z7              	100.00%		I3M0K4              	100.00%
Bootstrap support for L0P7Z7 as seed ortholog is 100%.
Bootstrap support for I3M0K4 as seed ortholog is 100%.

Group of orthologs #317. Best score 383 bits
Score difference with first non-orthologous sequence - P.jiroveci:312 S.tridecemlineatus:313

L0P7T8              	100.00%		I3M453              	100.00%
Bootstrap support for L0P7T8 as seed ortholog is 100%.
Bootstrap support for I3M453 as seed ortholog is 100%.

Group of orthologs #318. Best score 383 bits
Score difference with first non-orthologous sequence - P.jiroveci:383 S.tridecemlineatus:213

L0P6T3              	100.00%		I3NHL5              	100.00%
Bootstrap support for L0P6T3 as seed ortholog is 100%.
Bootstrap support for I3NHL5 as seed ortholog is 100%.

Group of orthologs #319. Best score 380 bits
Score difference with first non-orthologous sequence - P.jiroveci:380 S.tridecemlineatus:380

L0PCR5              	100.00%		I3MH30              	100.00%
L0P9C2              	56.21%		I3MDH0              	70.28%
Bootstrap support for L0PCR5 as seed ortholog is 100%.
Bootstrap support for I3MH30 as seed ortholog is 100%.

Group of orthologs #320. Best score 379 bits
Score difference with first non-orthologous sequence - P.jiroveci:379 S.tridecemlineatus:379

L0PCH8              	100.00%		I3MI25              	100.00%
Bootstrap support for L0PCH8 as seed ortholog is 100%.
Bootstrap support for I3MI25 as seed ortholog is 100%.

Group of orthologs #321. Best score 376 bits
Score difference with first non-orthologous sequence - P.jiroveci:266 S.tridecemlineatus:94

L0PCW4              	100.00%		I3M8B7              	100.00%
                    	       		I3N9L4              	78.81%
                    	       		I3MUI1              	47.33%
                    	       		I3NEC1              	45.88%
Bootstrap support for L0PCW4 as seed ortholog is 100%.
Bootstrap support for I3M8B7 as seed ortholog is 99%.

Group of orthologs #322. Best score 376 bits
Score difference with first non-orthologous sequence - P.jiroveci:376 S.tridecemlineatus:376

L0P6U2              	100.00%		I3MAQ2              	100.00%
Bootstrap support for L0P6U2 as seed ortholog is 100%.
Bootstrap support for I3MAQ2 as seed ortholog is 100%.

Group of orthologs #323. Best score 376 bits
Score difference with first non-orthologous sequence - P.jiroveci:376 S.tridecemlineatus:376

L0PFQ8              	100.00%		I3MJ89              	100.00%
Bootstrap support for L0PFQ8 as seed ortholog is 100%.
Bootstrap support for I3MJ89 as seed ortholog is 100%.

Group of orthologs #324. Best score 375 bits
Score difference with first non-orthologous sequence - P.jiroveci:375 S.tridecemlineatus:28

L0PH29              	100.00%		I3LZV3              	100.00%
                    	       		I3M9T8              	60.79%
                    	       		I3MVW2              	57.82%
Bootstrap support for L0PH29 as seed ortholog is 100%.
Bootstrap support for I3LZV3 as seed ortholog is 80%.

Group of orthologs #325. Best score 375 bits
Score difference with first non-orthologous sequence - P.jiroveci:375 S.tridecemlineatus:375

L0PFY3              	100.00%		I3M1R0              	100.00%
Bootstrap support for L0PFY3 as seed ortholog is 100%.
Bootstrap support for I3M1R0 as seed ortholog is 100%.

Group of orthologs #326. Best score 374 bits
Score difference with first non-orthologous sequence - P.jiroveci:374 S.tridecemlineatus:374

L0PAH9              	100.00%		I3LXK3              	100.00%
L0PAZ7              	32.13%		
Bootstrap support for L0PAH9 as seed ortholog is 100%.
Bootstrap support for I3LXK3 as seed ortholog is 100%.

Group of orthologs #327. Best score 373 bits
Score difference with first non-orthologous sequence - P.jiroveci:373 S.tridecemlineatus:264

L0PDQ3              	100.00%		I3MPI4              	100.00%
                    	       		I3M153              	64.66%
Bootstrap support for L0PDQ3 as seed ortholog is 100%.
Bootstrap support for I3MPI4 as seed ortholog is 100%.

Group of orthologs #328. Best score 373 bits
Score difference with first non-orthologous sequence - P.jiroveci:373 S.tridecemlineatus:373

L0PGF5              	100.00%		I3MNW0              	100.00%
Bootstrap support for L0PGF5 as seed ortholog is 100%.
Bootstrap support for I3MNW0 as seed ortholog is 100%.

Group of orthologs #329. Best score 372 bits
Score difference with first non-orthologous sequence - P.jiroveci:192 S.tridecemlineatus:372

L0PAU1              	100.00%		I3MGT6              	100.00%
                    	       		I3N1B9              	22.88%
Bootstrap support for L0PAU1 as seed ortholog is 99%.
Bootstrap support for I3MGT6 as seed ortholog is 100%.

Group of orthologs #330. Best score 372 bits
Score difference with first non-orthologous sequence - P.jiroveci:372 S.tridecemlineatus:372

L0PDI1              	100.00%		I3MSA6              	100.00%
Bootstrap support for L0PDI1 as seed ortholog is 100%.
Bootstrap support for I3MSA6 as seed ortholog is 100%.

Group of orthologs #331. Best score 372 bits
Score difference with first non-orthologous sequence - P.jiroveci:372 S.tridecemlineatus:176

L0PE19              	100.00%		I3N0E8              	100.00%
Bootstrap support for L0PE19 as seed ortholog is 100%.
Bootstrap support for I3N0E8 as seed ortholog is 100%.

Group of orthologs #332. Best score 371 bits
Score difference with first non-orthologous sequence - P.jiroveci:371 S.tridecemlineatus:371

L0PA23              	100.00%		I3LW54              	100.00%
Bootstrap support for L0PA23 as seed ortholog is 100%.
Bootstrap support for I3LW54 as seed ortholog is 100%.

Group of orthologs #333. Best score 371 bits
Score difference with first non-orthologous sequence - P.jiroveci:371 S.tridecemlineatus:302

L0P8G8              	100.00%		I3MJQ0              	100.00%
Bootstrap support for L0P8G8 as seed ortholog is 100%.
Bootstrap support for I3MJQ0 as seed ortholog is 100%.

Group of orthologs #334. Best score 371 bits
Score difference with first non-orthologous sequence - P.jiroveci:371 S.tridecemlineatus:178

L0P9Y8              	100.00%		I3MYI7              	100.00%
Bootstrap support for L0P9Y8 as seed ortholog is 100%.
Bootstrap support for I3MYI7 as seed ortholog is 99%.

Group of orthologs #335. Best score 370 bits
Score difference with first non-orthologous sequence - P.jiroveci:370 S.tridecemlineatus:370

L0PC90              	100.00%		I3MKL7              	100.00%
Bootstrap support for L0PC90 as seed ortholog is 100%.
Bootstrap support for I3MKL7 as seed ortholog is 100%.

Group of orthologs #336. Best score 369 bits
Score difference with first non-orthologous sequence - P.jiroveci:369 S.tridecemlineatus:369

L0P9U8              	100.00%		I3N219              	100.00%
Bootstrap support for L0P9U8 as seed ortholog is 100%.
Bootstrap support for I3N219 as seed ortholog is 100%.

Group of orthologs #337. Best score 368 bits
Score difference with first non-orthologous sequence - P.jiroveci:239 S.tridecemlineatus:70

L0PAY5              	100.00%		I3M8H1              	100.00%
Bootstrap support for L0PAY5 as seed ortholog is 100%.
Bootstrap support for I3M8H1 as seed ortholog is 95%.

Group of orthologs #338. Best score 367 bits
Score difference with first non-orthologous sequence - P.jiroveci:367 S.tridecemlineatus:367

L0PBX1              	100.00%		I3M0L5              	100.00%
Bootstrap support for L0PBX1 as seed ortholog is 100%.
Bootstrap support for I3M0L5 as seed ortholog is 100%.

Group of orthologs #339. Best score 367 bits
Score difference with first non-orthologous sequence - P.jiroveci:367 S.tridecemlineatus:317

L0PDW0              	100.00%		I3N9L6              	100.00%
Bootstrap support for L0PDW0 as seed ortholog is 100%.
Bootstrap support for I3N9L6 as seed ortholog is 100%.

Group of orthologs #340. Best score 366 bits
Score difference with first non-orthologous sequence - P.jiroveci:366 S.tridecemlineatus:94

L0P7X9              	100.00%		I3M524              	100.00%
L0PBE2              	80.81%		I3M556              	36.33%
                    	       		I3MN02              	8.02%
Bootstrap support for L0P7X9 as seed ortholog is 100%.
Bootstrap support for I3M524 as seed ortholog is 94%.

Group of orthologs #341. Best score 366 bits
Score difference with first non-orthologous sequence - P.jiroveci:366 S.tridecemlineatus:366

L0PBA8              	100.00%		I3MMF8              	100.00%
                    	       		I3MNX3              	10.84%
Bootstrap support for L0PBA8 as seed ortholog is 100%.
Bootstrap support for I3MMF8 as seed ortholog is 100%.

Group of orthologs #342. Best score 365 bits
Score difference with first non-orthologous sequence - P.jiroveci:365 S.tridecemlineatus:365

L0PCB2              	100.00%		I3M2M2              	100.00%
Bootstrap support for L0PCB2 as seed ortholog is 100%.
Bootstrap support for I3M2M2 as seed ortholog is 100%.

Group of orthologs #343. Best score 364 bits
Score difference with first non-orthologous sequence - P.jiroveci:364 S.tridecemlineatus:305

L0PEX9              	100.00%		I3MGK5              	100.00%
                    	       		I3M9F9              	63.12%
Bootstrap support for L0PEX9 as seed ortholog is 100%.
Bootstrap support for I3MGK5 as seed ortholog is 100%.

Group of orthologs #344. Best score 364 bits
Score difference with first non-orthologous sequence - P.jiroveci:364 S.tridecemlineatus:364

L0PES3              	100.00%		I3MRR8              	100.00%
Bootstrap support for L0PES3 as seed ortholog is 100%.
Bootstrap support for I3MRR8 as seed ortholog is 100%.

Group of orthologs #345. Best score 363 bits
Score difference with first non-orthologous sequence - P.jiroveci:123 S.tridecemlineatus:107

L0PBU4              	100.00%		I3LY42              	100.00%
                    	       		I3N6K3              	38.55%
Bootstrap support for L0PBU4 as seed ortholog is 99%.
Bootstrap support for I3LY42 as seed ortholog is 99%.

Group of orthologs #346. Best score 363 bits
Score difference with first non-orthologous sequence - P.jiroveci:110 S.tridecemlineatus:363

L0PD82              	100.00%		I3MLK5              	100.00%
Bootstrap support for L0PD82 as seed ortholog is 99%.
Bootstrap support for I3MLK5 as seed ortholog is 100%.

Group of orthologs #347. Best score 363 bits
Score difference with first non-orthologous sequence - P.jiroveci:219 S.tridecemlineatus:89

L0PFK8              	100.00%		I3N926              	100.00%
Bootstrap support for L0PFK8 as seed ortholog is 100%.
Bootstrap support for I3N926 as seed ortholog is 99%.

Group of orthologs #348. Best score 363 bits
Score difference with first non-orthologous sequence - P.jiroveci:363 S.tridecemlineatus:237

L0PG24              	100.00%		I3NDX3              	100.00%
Bootstrap support for L0PG24 as seed ortholog is 100%.
Bootstrap support for I3NDX3 as seed ortholog is 100%.

Group of orthologs #349. Best score 361 bits
Score difference with first non-orthologous sequence - P.jiroveci:361 S.tridecemlineatus:228

L0PA88              	100.00%		I3MPS0              	100.00%
Bootstrap support for L0PA88 as seed ortholog is 100%.
Bootstrap support for I3MPS0 as seed ortholog is 99%.

Group of orthologs #350. Best score 360 bits
Score difference with first non-orthologous sequence - P.jiroveci:360 S.tridecemlineatus:360

L0PAC7              	100.00%		I3M064              	100.00%
Bootstrap support for L0PAC7 as seed ortholog is 100%.
Bootstrap support for I3M064 as seed ortholog is 100%.

Group of orthologs #351. Best score 360 bits
Score difference with first non-orthologous sequence - P.jiroveci:360 S.tridecemlineatus:254

L0PDF2              	100.00%		I3MPE5              	100.00%
Bootstrap support for L0PDF2 as seed ortholog is 100%.
Bootstrap support for I3MPE5 as seed ortholog is 100%.

Group of orthologs #352. Best score 360 bits
Score difference with first non-orthologous sequence - P.jiroveci:360 S.tridecemlineatus:132

L0PEJ3              	100.00%		I3MQK1              	100.00%
Bootstrap support for L0PEJ3 as seed ortholog is 100%.
Bootstrap support for I3MQK1 as seed ortholog is 99%.

Group of orthologs #353. Best score 359 bits
Score difference with first non-orthologous sequence - P.jiroveci:359 S.tridecemlineatus:280

L0PG01              	100.00%		I3MJ43              	100.00%
L0P7J0              	81.94%		I3MCW6              	13.83%
Bootstrap support for L0PG01 as seed ortholog is 100%.
Bootstrap support for I3MJ43 as seed ortholog is 99%.

Group of orthologs #354. Best score 359 bits
Score difference with first non-orthologous sequence - P.jiroveci:359 S.tridecemlineatus:359

L0PBA9              	100.00%		I3MEX4              	100.00%
                    	       		I3MNP3              	38.04%
Bootstrap support for L0PBA9 as seed ortholog is 100%.
Bootstrap support for I3MEX4 as seed ortholog is 100%.

Group of orthologs #355. Best score 358 bits
Score difference with first non-orthologous sequence - P.jiroveci:210 S.tridecemlineatus:69

L0P9Z0              	100.00%		I3LXI1              	100.00%
                    	       		I3MNK8              	76.14%
Bootstrap support for L0P9Z0 as seed ortholog is 100%.
Bootstrap support for I3LXI1 as seed ortholog is 97%.

Group of orthologs #356. Best score 358 bits
Score difference with first non-orthologous sequence - P.jiroveci:358 S.tridecemlineatus:358

L0PBX2              	100.00%		I3MKM5              	100.00%
Bootstrap support for L0PBX2 as seed ortholog is 100%.
Bootstrap support for I3MKM5 as seed ortholog is 100%.

Group of orthologs #357. Best score 358 bits
Score difference with first non-orthologous sequence - P.jiroveci:358 S.tridecemlineatus:237

L0PD17              	100.00%		I3MLV7              	100.00%
Bootstrap support for L0PD17 as seed ortholog is 100%.
Bootstrap support for I3MLV7 as seed ortholog is 100%.

Group of orthologs #358. Best score 358 bits
Score difference with first non-orthologous sequence - P.jiroveci:358 S.tridecemlineatus:358

L0PCL9              	100.00%		I3MQ20              	100.00%
Bootstrap support for L0PCL9 as seed ortholog is 100%.
Bootstrap support for I3MQ20 as seed ortholog is 100%.

Group of orthologs #359. Best score 356 bits
Score difference with first non-orthologous sequence - P.jiroveci:356 S.tridecemlineatus:356

L0PBC5              	100.00%		I3MRJ9              	100.00%
Bootstrap support for L0PBC5 as seed ortholog is 100%.
Bootstrap support for I3MRJ9 as seed ortholog is 100%.

Group of orthologs #360. Best score 356 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 S.tridecemlineatus:107

L0PF10              	100.00%		I3MYX5              	100.00%
Bootstrap support for L0PF10 as seed ortholog is 100%.
Bootstrap support for I3MYX5 as seed ortholog is 99%.

Group of orthologs #361. Best score 355 bits
Score difference with first non-orthologous sequence - P.jiroveci:355 S.tridecemlineatus:355

L0PG82              	100.00%		I3M8Q2              	100.00%
Bootstrap support for L0PG82 as seed ortholog is 100%.
Bootstrap support for I3M8Q2 as seed ortholog is 100%.

Group of orthologs #362. Best score 355 bits
Score difference with first non-orthologous sequence - P.jiroveci:355 S.tridecemlineatus:138

L0PF21              	100.00%		I3M9X1              	100.00%
Bootstrap support for L0PF21 as seed ortholog is 100%.
Bootstrap support for I3M9X1 as seed ortholog is 99%.

Group of orthologs #363. Best score 354 bits
Score difference with first non-orthologous sequence - P.jiroveci:354 S.tridecemlineatus:354

L0PD18              	100.00%		I3MDB0              	100.00%
Bootstrap support for L0PD18 as seed ortholog is 100%.
Bootstrap support for I3MDB0 as seed ortholog is 100%.

Group of orthologs #364. Best score 352 bits
Score difference with first non-orthologous sequence - P.jiroveci:352 S.tridecemlineatus:352

L0P9K4              	100.00%		I3MNJ4              	100.00%
Bootstrap support for L0P9K4 as seed ortholog is 100%.
Bootstrap support for I3MNJ4 as seed ortholog is 100%.

Group of orthologs #365. Best score 350 bits
Score difference with first non-orthologous sequence - P.jiroveci:350 S.tridecemlineatus:281

L0PBQ1              	100.00%		I3M2Q3              	100.00%
Bootstrap support for L0PBQ1 as seed ortholog is 100%.
Bootstrap support for I3M2Q3 as seed ortholog is 100%.

Group of orthologs #366. Best score 350 bits
Score difference with first non-orthologous sequence - P.jiroveci:350 S.tridecemlineatus:350

L0PBP4              	100.00%		I3MDQ4              	100.00%
Bootstrap support for L0PBP4 as seed ortholog is 100%.
Bootstrap support for I3MDQ4 as seed ortholog is 100%.

Group of orthologs #367. Best score 350 bits
Score difference with first non-orthologous sequence - P.jiroveci:251 S.tridecemlineatus:350

L0P8W4              	100.00%		I3MPF8              	100.00%
Bootstrap support for L0P8W4 as seed ortholog is 100%.
Bootstrap support for I3MPF8 as seed ortholog is 100%.

Group of orthologs #368. Best score 349 bits
Score difference with first non-orthologous sequence - P.jiroveci:188 S.tridecemlineatus:252

L0P9D3              	100.00%		I3M3G9              	100.00%
L0P7B2              	51.54%		
Bootstrap support for L0P9D3 as seed ortholog is 99%.
Bootstrap support for I3M3G9 as seed ortholog is 100%.

Group of orthologs #369. Best score 349 bits
Score difference with first non-orthologous sequence - P.jiroveci:349 S.tridecemlineatus:60

L0PCL4              	100.00%		I3MCT3              	100.00%
Bootstrap support for L0PCL4 as seed ortholog is 100%.
Bootstrap support for I3MCT3 as seed ortholog is 88%.

Group of orthologs #370. Best score 348 bits
Score difference with first non-orthologous sequence - P.jiroveci:348 S.tridecemlineatus:348

L0PD02              	100.00%		I3M6D9              	100.00%
Bootstrap support for L0PD02 as seed ortholog is 100%.
Bootstrap support for I3M6D9 as seed ortholog is 100%.

Group of orthologs #371. Best score 347 bits
Score difference with first non-orthologous sequence - P.jiroveci:347 S.tridecemlineatus:256

L0PBQ9              	100.00%		I3M7U0              	100.00%
Bootstrap support for L0PBQ9 as seed ortholog is 100%.
Bootstrap support for I3M7U0 as seed ortholog is 100%.

Group of orthologs #372. Best score 346 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 S.tridecemlineatus:103

L0PBP2              	100.00%		I3LZ29              	100.00%
Bootstrap support for L0PBP2 as seed ortholog is 92%.
Bootstrap support for I3LZ29 as seed ortholog is 96%.

Group of orthologs #373. Best score 346 bits
Score difference with first non-orthologous sequence - P.jiroveci:346 S.tridecemlineatus:346

L0PF74              	100.00%		I3MDL7              	100.00%
Bootstrap support for L0PF74 as seed ortholog is 100%.
Bootstrap support for I3MDL7 as seed ortholog is 100%.

Group of orthologs #374. Best score 346 bits
Score difference with first non-orthologous sequence - P.jiroveci:346 S.tridecemlineatus:233

L0PBS9              	100.00%		I3N1B3              	100.00%
Bootstrap support for L0PBS9 as seed ortholog is 100%.
Bootstrap support for I3N1B3 as seed ortholog is 100%.

Group of orthologs #375. Best score 345 bits
Score difference with first non-orthologous sequence - P.jiroveci:170 S.tridecemlineatus:345

L0P9F3              	100.00%		I3M6Z5              	100.00%
                    	       		I3M221              	15.47%
Bootstrap support for L0P9F3 as seed ortholog is 99%.
Bootstrap support for I3M6Z5 as seed ortholog is 100%.

Group of orthologs #376. Best score 344 bits
Score difference with first non-orthologous sequence - P.jiroveci:344 S.tridecemlineatus:344

L0PBN2              	100.00%		I3M8B2              	100.00%
Bootstrap support for L0PBN2 as seed ortholog is 100%.
Bootstrap support for I3M8B2 as seed ortholog is 100%.

Group of orthologs #377. Best score 344 bits
Score difference with first non-orthologous sequence - P.jiroveci:344 S.tridecemlineatus:344

L0PD99              	100.00%		I3MFN0              	100.00%
Bootstrap support for L0PD99 as seed ortholog is 100%.
Bootstrap support for I3MFN0 as seed ortholog is 100%.

Group of orthologs #378. Best score 344 bits
Score difference with first non-orthologous sequence - P.jiroveci:344 S.tridecemlineatus:237

L0PGL1              	100.00%		I3N4B0              	100.00%
Bootstrap support for L0PGL1 as seed ortholog is 100%.
Bootstrap support for I3N4B0 as seed ortholog is 100%.

Group of orthologs #379. Best score 342 bits
Score difference with first non-orthologous sequence - P.jiroveci:342 S.tridecemlineatus:342

L0PED5              	100.00%		I3MCU5              	100.00%
Bootstrap support for L0PED5 as seed ortholog is 100%.
Bootstrap support for I3MCU5 as seed ortholog is 100%.

Group of orthologs #380. Best score 341 bits
Score difference with first non-orthologous sequence - P.jiroveci:341 S.tridecemlineatus:234

L0P7P4              	100.00%		I3LWI2              	100.00%
Bootstrap support for L0P7P4 as seed ortholog is 100%.
Bootstrap support for I3LWI2 as seed ortholog is 100%.

Group of orthologs #381. Best score 341 bits
Score difference with first non-orthologous sequence - P.jiroveci:341 S.tridecemlineatus:341

L0PA00              	100.00%		I3M264              	100.00%
Bootstrap support for L0PA00 as seed ortholog is 100%.
Bootstrap support for I3M264 as seed ortholog is 100%.

Group of orthologs #382. Best score 341 bits
Score difference with first non-orthologous sequence - P.jiroveci:341 S.tridecemlineatus:341

L0P7R5              	100.00%		I3MIM8              	100.00%
Bootstrap support for L0P7R5 as seed ortholog is 100%.
Bootstrap support for I3MIM8 as seed ortholog is 100%.

Group of orthologs #383. Best score 341 bits
Score difference with first non-orthologous sequence - P.jiroveci:173 S.tridecemlineatus:53

L0PCJ5              	100.00%		I3ME36              	100.00%
Bootstrap support for L0PCJ5 as seed ortholog is 99%.
Bootstrap support for I3ME36 as seed ortholog is 88%.

Group of orthologs #384. Best score 341 bits
Score difference with first non-orthologous sequence - P.jiroveci:341 S.tridecemlineatus:341

L0P8A6              	100.00%		I3MX58              	100.00%
Bootstrap support for L0P8A6 as seed ortholog is 100%.
Bootstrap support for I3MX58 as seed ortholog is 100%.

Group of orthologs #385. Best score 340 bits
Score difference with first non-orthologous sequence - P.jiroveci:340 S.tridecemlineatus:340

L0PCQ8              	100.00%		I3MJB0              	100.00%
Bootstrap support for L0PCQ8 as seed ortholog is 100%.
Bootstrap support for I3MJB0 as seed ortholog is 100%.

Group of orthologs #386. Best score 339 bits
Score difference with first non-orthologous sequence - P.jiroveci:339 S.tridecemlineatus:269

L0PF30              	100.00%		I3LWS4              	100.00%
Bootstrap support for L0PF30 as seed ortholog is 100%.
Bootstrap support for I3LWS4 as seed ortholog is 100%.

Group of orthologs #387. Best score 339 bits
Score difference with first non-orthologous sequence - P.jiroveci:339 S.tridecemlineatus:339

L0P9S4              	100.00%		I3M3M4              	100.00%
Bootstrap support for L0P9S4 as seed ortholog is 100%.
Bootstrap support for I3M3M4 as seed ortholog is 100%.

Group of orthologs #388. Best score 338 bits
Score difference with first non-orthologous sequence - P.jiroveci:338 S.tridecemlineatus:251

L0PEF5              	100.00%		I3MY31              	100.00%
Bootstrap support for L0PEF5 as seed ortholog is 100%.
Bootstrap support for I3MY31 as seed ortholog is 100%.

Group of orthologs #389. Best score 337 bits
Score difference with first non-orthologous sequence - P.jiroveci:337 S.tridecemlineatus:75

L0PBM5              	100.00%		I3M5N0              	100.00%
                    	       		I3N578              	17.61%
Bootstrap support for L0PBM5 as seed ortholog is 100%.
Bootstrap support for I3M5N0 as seed ortholog is 90%.

Group of orthologs #390. Best score 337 bits
Score difference with first non-orthologous sequence - P.jiroveci:337 S.tridecemlineatus:337

L0PF46              	100.00%		I3LZ25              	100.00%
Bootstrap support for L0PF46 as seed ortholog is 100%.
Bootstrap support for I3LZ25 as seed ortholog is 100%.

Group of orthologs #391. Best score 337 bits
Score difference with first non-orthologous sequence - P.jiroveci:337 S.tridecemlineatus:337

L0P8T4              	100.00%		I3MDY2              	100.00%
Bootstrap support for L0P8T4 as seed ortholog is 100%.
Bootstrap support for I3MDY2 as seed ortholog is 100%.

Group of orthologs #392. Best score 334 bits
Score difference with first non-orthologous sequence - P.jiroveci:334 S.tridecemlineatus:334

L0PB54              	100.00%		I3M8G1              	100.00%
                    	       		I3ME51              	42.69%
Bootstrap support for L0PB54 as seed ortholog is 100%.
Bootstrap support for I3M8G1 as seed ortholog is 100%.

Group of orthologs #393. Best score 334 bits
Score difference with first non-orthologous sequence - P.jiroveci:334 S.tridecemlineatus:334

L0P8R8              	100.00%		I3M265              	100.00%
Bootstrap support for L0P8R8 as seed ortholog is 100%.
Bootstrap support for I3M265 as seed ortholog is 100%.

Group of orthologs #394. Best score 334 bits
Score difference with first non-orthologous sequence - P.jiroveci:334 S.tridecemlineatus:141

L0PB24              	100.00%		I3N4M3              	100.00%
Bootstrap support for L0PB24 as seed ortholog is 100%.
Bootstrap support for I3N4M3 as seed ortholog is 99%.

Group of orthologs #395. Best score 334 bits
Score difference with first non-orthologous sequence - P.jiroveci:334 S.tridecemlineatus:334

L0PH85              	100.00%		I3NG24              	100.00%
Bootstrap support for L0PH85 as seed ortholog is 100%.
Bootstrap support for I3NG24 as seed ortholog is 100%.

Group of orthologs #396. Best score 333 bits
Score difference with first non-orthologous sequence - P.jiroveci:333 S.tridecemlineatus:194

L0PC17              	100.00%		I3MN85              	100.00%
L0PD22              	50.62%		
Bootstrap support for L0PC17 as seed ortholog is 100%.
Bootstrap support for I3MN85 as seed ortholog is 100%.

Group of orthologs #397. Best score 333 bits
Score difference with first non-orthologous sequence - P.jiroveci:333 S.tridecemlineatus:333

L0PEB2              	100.00%		I3MV73              	100.00%
Bootstrap support for L0PEB2 as seed ortholog is 100%.
Bootstrap support for I3MV73 as seed ortholog is 100%.

Group of orthologs #398. Best score 332 bits
Score difference with first non-orthologous sequence - P.jiroveci:332 S.tridecemlineatus:332

L0PF92              	100.00%		I3N6G0              	100.00%
Bootstrap support for L0PF92 as seed ortholog is 100%.
Bootstrap support for I3N6G0 as seed ortholog is 100%.

Group of orthologs #399. Best score 331 bits
Score difference with first non-orthologous sequence - P.jiroveci:237 S.tridecemlineatus:331

L0PB21              	100.00%		I3MLM6              	100.00%
                    	       		I3MJW2              	87.69%
Bootstrap support for L0PB21 as seed ortholog is 100%.
Bootstrap support for I3MLM6 as seed ortholog is 100%.

Group of orthologs #400. Best score 330 bits
Score difference with first non-orthologous sequence - P.jiroveci:330 S.tridecemlineatus:330

L0PBZ7              	100.00%		I3LVZ0              	100.00%
Bootstrap support for L0PBZ7 as seed ortholog is 100%.
Bootstrap support for I3LVZ0 as seed ortholog is 100%.

Group of orthologs #401. Best score 330 bits
Score difference with first non-orthologous sequence - P.jiroveci:330 S.tridecemlineatus:35

L0PA09              	100.00%		I3M435              	100.00%
Bootstrap support for L0PA09 as seed ortholog is 100%.
Bootstrap support for I3M435 as seed ortholog is 83%.

Group of orthologs #402. Best score 329 bits
Score difference with first non-orthologous sequence - P.jiroveci:329 S.tridecemlineatus:329

L0PFI2              	100.00%		I3LYT8              	100.00%
Bootstrap support for L0PFI2 as seed ortholog is 100%.
Bootstrap support for I3LYT8 as seed ortholog is 100%.

Group of orthologs #403. Best score 329 bits
Score difference with first non-orthologous sequence - P.jiroveci:329 S.tridecemlineatus:329

L0P8J2              	100.00%		I3MXN9              	100.00%
Bootstrap support for L0P8J2 as seed ortholog is 100%.
Bootstrap support for I3MXN9 as seed ortholog is 100%.

Group of orthologs #404. Best score 328 bits
Score difference with first non-orthologous sequence - P.jiroveci:328 S.tridecemlineatus:248

L0PBD2              	100.00%		I3MLB4              	100.00%
Bootstrap support for L0PBD2 as seed ortholog is 100%.
Bootstrap support for I3MLB4 as seed ortholog is 99%.

Group of orthologs #405. Best score 328 bits
Score difference with first non-orthologous sequence - P.jiroveci:328 S.tridecemlineatus:328

L0P8N3              	100.00%		I3NFM3              	100.00%
Bootstrap support for L0P8N3 as seed ortholog is 100%.
Bootstrap support for I3NFM3 as seed ortholog is 100%.

Group of orthologs #406. Best score 327 bits
Score difference with first non-orthologous sequence - P.jiroveci:327 S.tridecemlineatus:327

L0PAL9              	100.00%		I3NBS4              	100.00%
L0PBY7              	41.13%		I3N8V3              	62.41%
                    	       		I3NDT7              	53.80%
Bootstrap support for L0PAL9 as seed ortholog is 100%.
Bootstrap support for I3NBS4 as seed ortholog is 100%.

Group of orthologs #407. Best score 327 bits
Score difference with first non-orthologous sequence - P.jiroveci:327 S.tridecemlineatus:327

L0PAF9              	100.00%		I3MBS5              	100.00%
Bootstrap support for L0PAF9 as seed ortholog is 100%.
Bootstrap support for I3MBS5 as seed ortholog is 100%.

Group of orthologs #408. Best score 326 bits
Score difference with first non-orthologous sequence - P.jiroveci:326 S.tridecemlineatus:107

L0P891              	100.00%		I3M4M5              	100.00%
                    	       		I3MUA8              	68.60%
Bootstrap support for L0P891 as seed ortholog is 100%.
Bootstrap support for I3M4M5 as seed ortholog is 99%.

Group of orthologs #409. Best score 326 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 S.tridecemlineatus:326

L0P8N0              	100.00%		I3NBH4              	100.00%
Bootstrap support for L0P8N0 as seed ortholog is 100%.
Bootstrap support for I3NBH4 as seed ortholog is 100%.

Group of orthologs #410. Best score 325 bits
Score difference with first non-orthologous sequence - P.jiroveci:325 S.tridecemlineatus:325

L0PBT3              	100.00%		I3M054              	100.00%
Bootstrap support for L0PBT3 as seed ortholog is 100%.
Bootstrap support for I3M054 as seed ortholog is 100%.

Group of orthologs #411. Best score 325 bits
Score difference with first non-orthologous sequence - P.jiroveci:325 S.tridecemlineatus:261

L0PB00              	100.00%		I3M5C7              	100.00%
Bootstrap support for L0PB00 as seed ortholog is 100%.
Bootstrap support for I3M5C7 as seed ortholog is 100%.

Group of orthologs #412. Best score 324 bits
Score difference with first non-orthologous sequence - P.jiroveci:324 S.tridecemlineatus:324

L0PBY3              	100.00%		I3MPP6              	100.00%
                    	       		I3NG29              	26.74%
Bootstrap support for L0PBY3 as seed ortholog is 100%.
Bootstrap support for I3MPP6 as seed ortholog is 100%.

Group of orthologs #413. Best score 324 bits
Score difference with first non-orthologous sequence - P.jiroveci:324 S.tridecemlineatus:250

L0PDH7              	100.00%		I3LWG0              	100.00%
Bootstrap support for L0PDH7 as seed ortholog is 100%.
Bootstrap support for I3LWG0 as seed ortholog is 100%.

Group of orthologs #414. Best score 323 bits
Score difference with first non-orthologous sequence - P.jiroveci:323 S.tridecemlineatus:323

L0PF98              	100.00%		I3M7Z7              	100.00%
                    	       		I3MH66              	21.84%
Bootstrap support for L0PF98 as seed ortholog is 100%.
Bootstrap support for I3M7Z7 as seed ortholog is 100%.

Group of orthologs #415. Best score 323 bits
Score difference with first non-orthologous sequence - P.jiroveci:217 S.tridecemlineatus:179

L0PBM6              	100.00%		I3M5X5              	100.00%
Bootstrap support for L0PBM6 as seed ortholog is 99%.
Bootstrap support for I3M5X5 as seed ortholog is 99%.

Group of orthologs #416. Best score 323 bits
Score difference with first non-orthologous sequence - P.jiroveci:323 S.tridecemlineatus:323

L0PCG4              	100.00%		I3N7V2              	100.00%
Bootstrap support for L0PCG4 as seed ortholog is 100%.
Bootstrap support for I3N7V2 as seed ortholog is 100%.

Group of orthologs #417. Best score 322 bits
Score difference with first non-orthologous sequence - P.jiroveci:322 S.tridecemlineatus:322

L0PBN1              	100.00%		I3MJZ7              	100.00%
Bootstrap support for L0PBN1 as seed ortholog is 100%.
Bootstrap support for I3MJZ7 as seed ortholog is 100%.

Group of orthologs #418. Best score 320 bits
Score difference with first non-orthologous sequence - P.jiroveci:320 S.tridecemlineatus:320

L0P7N5              	100.00%		I3M3B4              	100.00%
                    	       		I3MHX3              	18.72%
Bootstrap support for L0P7N5 as seed ortholog is 100%.
Bootstrap support for I3M3B4 as seed ortholog is 100%.

Group of orthologs #419. Best score 320 bits
Score difference with first non-orthologous sequence - P.jiroveci:320 S.tridecemlineatus:320

L0PEZ2              	100.00%		I3MLU2              	100.00%
L0PH30              	85.17%		
Bootstrap support for L0PEZ2 as seed ortholog is 100%.
Bootstrap support for I3MLU2 as seed ortholog is 100%.

Group of orthologs #420. Best score 319 bits
Score difference with first non-orthologous sequence - P.jiroveci:319 S.tridecemlineatus:34

L0PGR0              	100.00%		I3M5T6              	100.00%
                    	       		I3NEC3              	57.33%
Bootstrap support for L0PGR0 as seed ortholog is 100%.
Bootstrap support for I3M5T6 as seed ortholog is 73%.
Alternative seed ortholog is I3MCT6 (34 bits away from this cluster)

Group of orthologs #421. Best score 319 bits
Score difference with first non-orthologous sequence - P.jiroveci:319 S.tridecemlineatus:201

L0P983              	100.00%		I3MMS6              	100.00%
Bootstrap support for L0P983 as seed ortholog is 100%.
Bootstrap support for I3MMS6 as seed ortholog is 100%.

Group of orthologs #422. Best score 319 bits
Score difference with first non-orthologous sequence - P.jiroveci:319 S.tridecemlineatus:206

L0PFE9              	100.00%		I3N263              	100.00%
Bootstrap support for L0PFE9 as seed ortholog is 100%.
Bootstrap support for I3N263 as seed ortholog is 99%.

Group of orthologs #423. Best score 318 bits
Score difference with first non-orthologous sequence - P.jiroveci:318 S.tridecemlineatus:318

L0PGL6              	100.00%		I3M8D0              	100.00%
Bootstrap support for L0PGL6 as seed ortholog is 100%.
Bootstrap support for I3M8D0 as seed ortholog is 100%.

Group of orthologs #424. Best score 317 bits
Score difference with first non-orthologous sequence - P.jiroveci:317 S.tridecemlineatus:317

L0PFC9              	100.00%		I3M4B3              	100.00%
                    	       		I3N5A9              	66.83%
Bootstrap support for L0PFC9 as seed ortholog is 100%.
Bootstrap support for I3M4B3 as seed ortholog is 100%.

Group of orthologs #425. Best score 317 bits
Score difference with first non-orthologous sequence - P.jiroveci:317 S.tridecemlineatus:317

L0P9G9              	100.00%		I3LXQ2              	100.00%
Bootstrap support for L0P9G9 as seed ortholog is 100%.
Bootstrap support for I3LXQ2 as seed ortholog is 100%.

Group of orthologs #426. Best score 317 bits
Score difference with first non-orthologous sequence - P.jiroveci:317 S.tridecemlineatus:317

L0PAU5              	100.00%		I3M1V7              	100.00%
Bootstrap support for L0PAU5 as seed ortholog is 100%.
Bootstrap support for I3M1V7 as seed ortholog is 100%.

Group of orthologs #427. Best score 317 bits
Score difference with first non-orthologous sequence - P.jiroveci:317 S.tridecemlineatus:236

L0PDL9              	100.00%		I3MKF3              	100.00%
Bootstrap support for L0PDL9 as seed ortholog is 100%.
Bootstrap support for I3MKF3 as seed ortholog is 100%.

Group of orthologs #428. Best score 315 bits
Score difference with first non-orthologous sequence - P.jiroveci:315 S.tridecemlineatus:315

L0PA60              	100.00%		I3NCJ1              	100.00%
Bootstrap support for L0PA60 as seed ortholog is 100%.
Bootstrap support for I3NCJ1 as seed ortholog is 100%.

Group of orthologs #429. Best score 314 bits
Score difference with first non-orthologous sequence - P.jiroveci:314 S.tridecemlineatus:314

L0PG43              	100.00%		I3M7P4              	100.00%
Bootstrap support for L0PG43 as seed ortholog is 100%.
Bootstrap support for I3M7P4 as seed ortholog is 100%.

Group of orthologs #430. Best score 313 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 S.tridecemlineatus:51

L0P6X2              	100.00%		I3LXD0              	100.00%
                    	       		I3N4S4              	22.08%
Bootstrap support for L0P6X2 as seed ortholog is 99%.
Bootstrap support for I3LXD0 as seed ortholog is 95%.

Group of orthologs #431. Best score 313 bits
Score difference with first non-orthologous sequence - P.jiroveci:313 S.tridecemlineatus:313

L0P9X7              	100.00%		I3MR15              	100.00%
Bootstrap support for L0P9X7 as seed ortholog is 100%.
Bootstrap support for I3MR15 as seed ortholog is 100%.

Group of orthologs #432. Best score 312 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 S.tridecemlineatus:88

L0PB70              	100.00%		I3MK40              	100.00%
                    	       		I3N6C3              	37.63%
Bootstrap support for L0PB70 as seed ortholog is 98%.
Bootstrap support for I3MK40 as seed ortholog is 99%.

Group of orthologs #433. Best score 312 bits
Score difference with first non-orthologous sequence - P.jiroveci:312 S.tridecemlineatus:312

L0PC62              	100.00%		I3MJE7              	100.00%
Bootstrap support for L0PC62 as seed ortholog is 100%.
Bootstrap support for I3MJE7 as seed ortholog is 100%.

Group of orthologs #434. Best score 312 bits
Score difference with first non-orthologous sequence - P.jiroveci:312 S.tridecemlineatus:312

L0PD68              	100.00%		I3MNC2              	100.00%
Bootstrap support for L0PD68 as seed ortholog is 100%.
Bootstrap support for I3MNC2 as seed ortholog is 100%.

Group of orthologs #435. Best score 312 bits
Score difference with first non-orthologous sequence - P.jiroveci:312 S.tridecemlineatus:222

L0PFP2              	100.00%		I3N691              	100.00%
Bootstrap support for L0PFP2 as seed ortholog is 100%.
Bootstrap support for I3N691 as seed ortholog is 100%.

Group of orthologs #436. Best score 309 bits
Score difference with first non-orthologous sequence - P.jiroveci:309 S.tridecemlineatus:309

L0PAG0              	100.00%		I3N3Y5              	100.00%
                    	       		I3MI39              	89.36%
Bootstrap support for L0PAG0 as seed ortholog is 100%.
Bootstrap support for I3N3Y5 as seed ortholog is 100%.

Group of orthologs #437. Best score 309 bits
Score difference with first non-orthologous sequence - P.jiroveci:309 S.tridecemlineatus:215

L0PDV0              	100.00%		I3MMJ3              	100.00%
Bootstrap support for L0PDV0 as seed ortholog is 100%.
Bootstrap support for I3MMJ3 as seed ortholog is 100%.

Group of orthologs #438. Best score 308 bits
Score difference with first non-orthologous sequence - P.jiroveci:308 S.tridecemlineatus:308

L0PFG1              	100.00%		I3M6Z1              	100.00%
Bootstrap support for L0PFG1 as seed ortholog is 100%.
Bootstrap support for I3M6Z1 as seed ortholog is 100%.

Group of orthologs #439. Best score 308 bits
Score difference with first non-orthologous sequence - P.jiroveci:308 S.tridecemlineatus:212

L0PH80              	100.00%		I3MPE1              	100.00%
Bootstrap support for L0PH80 as seed ortholog is 100%.
Bootstrap support for I3MPE1 as seed ortholog is 100%.

Group of orthologs #440. Best score 307 bits
Score difference with first non-orthologous sequence - P.jiroveci:307 S.tridecemlineatus:307

L0PAP4              	100.00%		I3LZ01              	100.00%
                    	       		I3LZ06              	52.60%
Bootstrap support for L0PAP4 as seed ortholog is 100%.
Bootstrap support for I3LZ01 as seed ortholog is 100%.

Group of orthologs #441. Best score 307 bits
Score difference with first non-orthologous sequence - P.jiroveci:307 S.tridecemlineatus:30

L0PG34              	100.00%		I3M0G1              	100.00%
Bootstrap support for L0PG34 as seed ortholog is 100%.
Bootstrap support for I3M0G1 as seed ortholog is 97%.

Group of orthologs #442. Best score 307 bits
Score difference with first non-orthologous sequence - P.jiroveci:307 S.tridecemlineatus:307

L0PBD0              	100.00%		I3MCL1              	100.00%
Bootstrap support for L0PBD0 as seed ortholog is 100%.
Bootstrap support for I3MCL1 as seed ortholog is 100%.

Group of orthologs #443. Best score 307 bits
Score difference with first non-orthologous sequence - P.jiroveci:307 S.tridecemlineatus:307

L0P9X4              	100.00%		I3N0Y3              	100.00%
Bootstrap support for L0P9X4 as seed ortholog is 100%.
Bootstrap support for I3N0Y3 as seed ortholog is 100%.

Group of orthologs #444. Best score 306 bits
Score difference with first non-orthologous sequence - P.jiroveci:306 S.tridecemlineatus:306

L0PGC4              	100.00%		I3M269              	100.00%
Bootstrap support for L0PGC4 as seed ortholog is 100%.
Bootstrap support for I3M269 as seed ortholog is 100%.

Group of orthologs #445. Best score 305 bits
Score difference with first non-orthologous sequence - P.jiroveci:305 S.tridecemlineatus:55

L0P9S5              	100.00%		I3M5F9              	100.00%
Bootstrap support for L0P9S5 as seed ortholog is 100%.
Bootstrap support for I3M5F9 as seed ortholog is 99%.

Group of orthologs #446. Best score 303 bits
Score difference with first non-orthologous sequence - P.jiroveci:303 S.tridecemlineatus:303

L0PAJ2              	100.00%		I3MEL1              	100.00%
Bootstrap support for L0PAJ2 as seed ortholog is 100%.
Bootstrap support for I3MEL1 as seed ortholog is 100%.

Group of orthologs #447. Best score 303 bits
Score difference with first non-orthologous sequence - P.jiroveci:303 S.tridecemlineatus:303

L0PHK3              	100.00%		I3MQT8              	100.00%
Bootstrap support for L0PHK3 as seed ortholog is 100%.
Bootstrap support for I3MQT8 as seed ortholog is 100%.

Group of orthologs #448. Best score 303 bits
Score difference with first non-orthologous sequence - P.jiroveci:303 S.tridecemlineatus:303

L0PD03              	100.00%		I3NCT4              	100.00%
Bootstrap support for L0PD03 as seed ortholog is 100%.
Bootstrap support for I3NCT4 as seed ortholog is 100%.

Group of orthologs #449. Best score 302 bits
Score difference with first non-orthologous sequence - P.jiroveci:302 S.tridecemlineatus:136

L0PHE4              	100.00%		I3LXP4              	100.00%
                    	       		I3MHA7              	63.54%
Bootstrap support for L0PHE4 as seed ortholog is 100%.
Bootstrap support for I3LXP4 as seed ortholog is 99%.

Group of orthologs #450. Best score 302 bits
Score difference with first non-orthologous sequence - P.jiroveci:212 S.tridecemlineatus:76

L0P966              	100.00%		I3M7B4              	100.00%
Bootstrap support for L0P966 as seed ortholog is 99%.
Bootstrap support for I3M7B4 as seed ortholog is 94%.

Group of orthologs #451. Best score 302 bits
Score difference with first non-orthologous sequence - P.jiroveci:302 S.tridecemlineatus:302

L0PFM4              	100.00%		I3MKT9              	100.00%
Bootstrap support for L0PFM4 as seed ortholog is 100%.
Bootstrap support for I3MKT9 as seed ortholog is 100%.

Group of orthologs #452. Best score 300 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 S.tridecemlineatus:300

L0P720              	100.00%		I3M763              	100.00%
Bootstrap support for L0P720 as seed ortholog is 99%.
Bootstrap support for I3M763 as seed ortholog is 100%.

Group of orthologs #453. Best score 300 bits
Score difference with first non-orthologous sequence - P.jiroveci:300 S.tridecemlineatus:300

L0PCV1              	100.00%		I3M2Z9              	100.00%
Bootstrap support for L0PCV1 as seed ortholog is 100%.
Bootstrap support for I3M2Z9 as seed ortholog is 100%.

Group of orthologs #454. Best score 300 bits
Score difference with first non-orthologous sequence - P.jiroveci:179 S.tridecemlineatus:120

L0PB10              	100.00%		I3MPD2              	100.00%
Bootstrap support for L0PB10 as seed ortholog is 100%.
Bootstrap support for I3MPD2 as seed ortholog is 99%.

Group of orthologs #455. Best score 300 bits
Score difference with first non-orthologous sequence - P.jiroveci:300 S.tridecemlineatus:161

L0PCN1              	100.00%		I3MNR6              	100.00%
Bootstrap support for L0PCN1 as seed ortholog is 100%.
Bootstrap support for I3MNR6 as seed ortholog is 100%.

Group of orthologs #456. Best score 300 bits
Score difference with first non-orthologous sequence - P.jiroveci:70 S.tridecemlineatus:300

L0PA63              	100.00%		I3MWV5              	100.00%
Bootstrap support for L0PA63 as seed ortholog is 78%.
Bootstrap support for I3MWV5 as seed ortholog is 100%.

Group of orthologs #457. Best score 299 bits
Score difference with first non-orthologous sequence - P.jiroveci:198 S.tridecemlineatus:119

L0P8B4              	100.00%		I3MLE8              	100.00%
                    	       		I3MFP6              	51.83%
Bootstrap support for L0P8B4 as seed ortholog is 100%.
Bootstrap support for I3MLE8 as seed ortholog is 99%.

Group of orthologs #458. Best score 299 bits
Score difference with first non-orthologous sequence - P.jiroveci:299 S.tridecemlineatus:203

L0PBK1              	100.00%		I3MK43              	100.00%
Bootstrap support for L0PBK1 as seed ortholog is 100%.
Bootstrap support for I3MK43 as seed ortholog is 100%.

Group of orthologs #459. Best score 299 bits
Score difference with first non-orthologous sequence - P.jiroveci:299 S.tridecemlineatus:299

L0PF79              	100.00%		I3MMY1              	100.00%
Bootstrap support for L0PF79 as seed ortholog is 100%.
Bootstrap support for I3MMY1 as seed ortholog is 100%.

Group of orthologs #460. Best score 298 bits
Score difference with first non-orthologous sequence - P.jiroveci:298 S.tridecemlineatus:298

L0PFI8              	100.00%		I3M6Y6              	100.00%
Bootstrap support for L0PFI8 as seed ortholog is 100%.
Bootstrap support for I3M6Y6 as seed ortholog is 100%.

Group of orthologs #461. Best score 297 bits
Score difference with first non-orthologous sequence - P.jiroveci:297 S.tridecemlineatus:297

L0PCI3              	100.00%		I3LZV1              	100.00%
Bootstrap support for L0PCI3 as seed ortholog is 100%.
Bootstrap support for I3LZV1 as seed ortholog is 100%.

Group of orthologs #462. Best score 297 bits
Score difference with first non-orthologous sequence - P.jiroveci:44 S.tridecemlineatus:37

L0PD71              	100.00%		I3MBB8              	100.00%
Bootstrap support for L0PD71 as seed ortholog is 91%.
Bootstrap support for I3MBB8 as seed ortholog is 86%.

Group of orthologs #463. Best score 297 bits
Score difference with first non-orthologous sequence - P.jiroveci:48 S.tridecemlineatus:297

L0PAM1              	100.00%		I3MR22              	100.00%
Bootstrap support for L0PAM1 as seed ortholog is 89%.
Bootstrap support for I3MR22 as seed ortholog is 100%.

Group of orthologs #464. Best score 297 bits
Score difference with first non-orthologous sequence - P.jiroveci:244 S.tridecemlineatus:103

L0P8I7              	100.00%		I3NCD1              	100.00%
Bootstrap support for L0P8I7 as seed ortholog is 100%.
Bootstrap support for I3NCD1 as seed ortholog is 99%.

Group of orthologs #465. Best score 296 bits
Score difference with first non-orthologous sequence - P.jiroveci:252 S.tridecemlineatus:233

L0P8I1              	100.00%		I3NCM2              	100.00%
Bootstrap support for L0P8I1 as seed ortholog is 100%.
Bootstrap support for I3NCM2 as seed ortholog is 100%.

Group of orthologs #466. Best score 295 bits
Score difference with first non-orthologous sequence - P.jiroveci:295 S.tridecemlineatus:295

L0PBT9              	100.00%		I3MLW4              	100.00%
L0P9Y0              	42.00%		
Bootstrap support for L0PBT9 as seed ortholog is 100%.
Bootstrap support for I3MLW4 as seed ortholog is 100%.

Group of orthologs #467. Best score 294 bits
Score difference with first non-orthologous sequence - P.jiroveci:294 S.tridecemlineatus:294

L0PG22              	100.00%		I3M5Z0              	100.00%
L0PB04              	70.98%		
Bootstrap support for L0PG22 as seed ortholog is 100%.
Bootstrap support for I3M5Z0 as seed ortholog is 100%.

Group of orthologs #468. Best score 294 bits
Score difference with first non-orthologous sequence - P.jiroveci:294 S.tridecemlineatus:208

L0PEC0              	100.00%		I3MJA2              	100.00%
Bootstrap support for L0PEC0 as seed ortholog is 100%.
Bootstrap support for I3MJA2 as seed ortholog is 100%.

Group of orthologs #469. Best score 294 bits
Score difference with first non-orthologous sequence - P.jiroveci:294 S.tridecemlineatus:294

L0PHG7              	100.00%		I3MH39              	100.00%
Bootstrap support for L0PHG7 as seed ortholog is 100%.
Bootstrap support for I3MH39 as seed ortholog is 100%.

Group of orthologs #470. Best score 292 bits
Score difference with first non-orthologous sequence - P.jiroveci:292 S.tridecemlineatus:1

L0P961              	100.00%		I3MZF4              	100.00%
                    	       		I3ME64              	81.06%
                    	       		I3ME63              	70.46%
Bootstrap support for L0P961 as seed ortholog is 100%.
Bootstrap support for I3MZF4 as seed ortholog is 52%.
Alternative seed ortholog is I3M9L2 (1 bits away from this cluster)

Group of orthologs #471. Best score 292 bits
Score difference with first non-orthologous sequence - P.jiroveci:292 S.tridecemlineatus:292

L0PB28              	100.00%		I3M8X1              	100.00%
Bootstrap support for L0PB28 as seed ortholog is 100%.
Bootstrap support for I3M8X1 as seed ortholog is 100%.

Group of orthologs #472. Best score 292 bits
Score difference with first non-orthologous sequence - P.jiroveci:292 S.tridecemlineatus:218

L0PAL2              	100.00%		I3MVJ4              	100.00%
Bootstrap support for L0PAL2 as seed ortholog is 100%.
Bootstrap support for I3MVJ4 as seed ortholog is 100%.

Group of orthologs #473. Best score 292 bits
Score difference with first non-orthologous sequence - P.jiroveci:292 S.tridecemlineatus:221

L0PDZ2              	100.00%		I3N396              	100.00%
Bootstrap support for L0PDZ2 as seed ortholog is 100%.
Bootstrap support for I3N396 as seed ortholog is 100%.

Group of orthologs #474. Best score 291 bits
Score difference with first non-orthologous sequence - P.jiroveci:291 S.tridecemlineatus:291

L0PEY2              	100.00%		I3LWY9              	100.00%
Bootstrap support for L0PEY2 as seed ortholog is 100%.
Bootstrap support for I3LWY9 as seed ortholog is 100%.

Group of orthologs #475. Best score 291 bits
Score difference with first non-orthologous sequence - P.jiroveci:291 S.tridecemlineatus:291

L0PG44              	100.00%		I3M651              	100.00%
Bootstrap support for L0PG44 as seed ortholog is 100%.
Bootstrap support for I3M651 as seed ortholog is 100%.

Group of orthologs #476. Best score 291 bits
Score difference with first non-orthologous sequence - P.jiroveci:291 S.tridecemlineatus:291

L0P9Z7              	100.00%		I3MKU2              	100.00%
Bootstrap support for L0P9Z7 as seed ortholog is 100%.
Bootstrap support for I3MKU2 as seed ortholog is 100%.

Group of orthologs #477. Best score 290 bits
Score difference with first non-orthologous sequence - P.jiroveci:290 S.tridecemlineatus:102

L0PH42              	100.00%		I3N6U4              	100.00%
                    	       		I3MRB9              	57.98%
                    	       		I3MYT6              	54.74%
Bootstrap support for L0PH42 as seed ortholog is 100%.
Bootstrap support for I3N6U4 as seed ortholog is 98%.

Group of orthologs #478. Best score 290 bits
Score difference with first non-orthologous sequence - P.jiroveci:290 S.tridecemlineatus:290

L0P912              	100.00%		I3MQH5              	100.00%
L0P908              	89.66%		
Bootstrap support for L0P912 as seed ortholog is 100%.
Bootstrap support for I3MQH5 as seed ortholog is 100%.

Group of orthologs #479. Best score 289 bits
Score difference with first non-orthologous sequence - P.jiroveci:289 S.tridecemlineatus:40

L0PG89              	100.00%		I3MRV6              	100.00%
                    	       		I3MDT9              	15.54%
                    	       		I3MHV8              	14.08%
                    	       		I3MP68              	10.97%
Bootstrap support for L0PG89 as seed ortholog is 100%.
Bootstrap support for I3MRV6 as seed ortholog is 85%.

Group of orthologs #480. Best score 289 bits
Score difference with first non-orthologous sequence - P.jiroveci:231 S.tridecemlineatus:199

L0PE04              	100.00%		I3LXN5              	100.00%
Bootstrap support for L0PE04 as seed ortholog is 100%.
Bootstrap support for I3LXN5 as seed ortholog is 100%.

Group of orthologs #481. Best score 289 bits
Score difference with first non-orthologous sequence - P.jiroveci:289 S.tridecemlineatus:289

L0PHG9              	100.00%		I3M817              	100.00%
Bootstrap support for L0PHG9 as seed ortholog is 100%.
Bootstrap support for I3M817 as seed ortholog is 100%.

Group of orthologs #482. Best score 289 bits
Score difference with first non-orthologous sequence - P.jiroveci:289 S.tridecemlineatus:289

L0PDL6              	100.00%		I3ME85              	100.00%
Bootstrap support for L0PDL6 as seed ortholog is 100%.
Bootstrap support for I3ME85 as seed ortholog is 100%.

Group of orthologs #483. Best score 289 bits
Score difference with first non-orthologous sequence - P.jiroveci:155 S.tridecemlineatus:183

L0PDB7              	100.00%		I3N522              	100.00%
Bootstrap support for L0PDB7 as seed ortholog is 100%.
Bootstrap support for I3N522 as seed ortholog is 100%.

Group of orthologs #484. Best score 289 bits
Score difference with first non-orthologous sequence - P.jiroveci:289 S.tridecemlineatus:289

L0PDV1              	100.00%		I3N9S8              	100.00%
Bootstrap support for L0PDV1 as seed ortholog is 100%.
Bootstrap support for I3N9S8 as seed ortholog is 100%.

Group of orthologs #485. Best score 288 bits
Score difference with first non-orthologous sequence - P.jiroveci:288 S.tridecemlineatus:288

L0PFZ0              	100.00%		I3M410              	100.00%
Bootstrap support for L0PFZ0 as seed ortholog is 100%.
Bootstrap support for I3M410 as seed ortholog is 100%.

Group of orthologs #486. Best score 288 bits
Score difference with first non-orthologous sequence - P.jiroveci:288 S.tridecemlineatus:196

L0PEM3              	100.00%		I3M7Y8              	100.00%
Bootstrap support for L0PEM3 as seed ortholog is 100%.
Bootstrap support for I3M7Y8 as seed ortholog is 100%.

Group of orthologs #487. Best score 288 bits
Score difference with first non-orthologous sequence - P.jiroveci:288 S.tridecemlineatus:288

L0P861              	100.00%		I3N9G0              	100.00%
Bootstrap support for L0P861 as seed ortholog is 100%.
Bootstrap support for I3N9G0 as seed ortholog is 100%.

Group of orthologs #488. Best score 287 bits
Score difference with first non-orthologous sequence - P.jiroveci:208 S.tridecemlineatus:156

L0P9F6              	100.00%		I3MNS8              	100.00%
                    	       		I3N476              	43.52%
                    	       		I3NHB6              	43.23%
                    	       		I3MHK9              	28.82%
Bootstrap support for L0P9F6 as seed ortholog is 100%.
Bootstrap support for I3MNS8 as seed ortholog is 100%.

Group of orthologs #489. Best score 287 bits
Score difference with first non-orthologous sequence - P.jiroveci:218 S.tridecemlineatus:147

L0PEI4              	100.00%		I3MB20              	100.00%
Bootstrap support for L0PEI4 as seed ortholog is 100%.
Bootstrap support for I3MB20 as seed ortholog is 99%.

Group of orthologs #490. Best score 287 bits
Score difference with first non-orthologous sequence - P.jiroveci:287 S.tridecemlineatus:287

L0PIV4              	100.00%		I3MRC9              	100.00%
Bootstrap support for L0PIV4 as seed ortholog is 100%.
Bootstrap support for I3MRC9 as seed ortholog is 100%.

Group of orthologs #491. Best score 286 bits
Score difference with first non-orthologous sequence - P.jiroveci:286 S.tridecemlineatus:286

L0P9S7              	100.00%		I3M0Y8              	100.00%
Bootstrap support for L0P9S7 as seed ortholog is 100%.
Bootstrap support for I3M0Y8 as seed ortholog is 100%.

Group of orthologs #492. Best score 285 bits
Score difference with first non-orthologous sequence - P.jiroveci:285 S.tridecemlineatus:285

L0PEM6              	100.00%		I3MIZ5              	100.00%
                    	       		I3N6H3              	71.31%
Bootstrap support for L0PEM6 as seed ortholog is 100%.
Bootstrap support for I3MIZ5 as seed ortholog is 100%.

Group of orthologs #493. Best score 285 bits
Score difference with first non-orthologous sequence - P.jiroveci:172 S.tridecemlineatus:285

L0PEG1              	100.00%		I3MBD5              	100.00%
Bootstrap support for L0PEG1 as seed ortholog is 99%.
Bootstrap support for I3MBD5 as seed ortholog is 100%.

Group of orthologs #494. Best score 285 bits
Score difference with first non-orthologous sequence - P.jiroveci:285 S.tridecemlineatus:237

L0PFS8              	100.00%		I3MGX1              	100.00%
Bootstrap support for L0PFS8 as seed ortholog is 100%.
Bootstrap support for I3MGX1 as seed ortholog is 100%.

Group of orthologs #495. Best score 284 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 S.tridecemlineatus:19

L0PB47              	100.00%		I3M097              	100.00%
                    	       		I3MD33              	15.12%
Bootstrap support for L0PB47 as seed ortholog is 99%.
Bootstrap support for I3M097 as seed ortholog is 69%.
Alternative seed ortholog is I3MFA0 (19 bits away from this cluster)

Group of orthologs #496. Best score 284 bits
Score difference with first non-orthologous sequence - P.jiroveci:234 S.tridecemlineatus:193

L0PFE0              	100.00%		I3MKF7              	100.00%
Bootstrap support for L0PFE0 as seed ortholog is 100%.
Bootstrap support for I3MKF7 as seed ortholog is 100%.

Group of orthologs #497. Best score 283 bits
Score difference with first non-orthologous sequence - P.jiroveci:283 S.tridecemlineatus:283

L0PDC7              	100.00%		I3M5Y7              	100.00%
Bootstrap support for L0PDC7 as seed ortholog is 100%.
Bootstrap support for I3M5Y7 as seed ortholog is 100%.

Group of orthologs #498. Best score 283 bits
Score difference with first non-orthologous sequence - P.jiroveci:283 S.tridecemlineatus:283

L0PCX5              	100.00%		I3MEH1              	100.00%
Bootstrap support for L0PCX5 as seed ortholog is 100%.
Bootstrap support for I3MEH1 as seed ortholog is 100%.

Group of orthologs #499. Best score 282 bits
Score difference with first non-orthologous sequence - P.jiroveci:282 S.tridecemlineatus:282

L0PEJ1              	100.00%		I3LVV2              	100.00%
                    	       		I3N7R5              	57.14%
                    	       		I3MG07              	30.09%
Bootstrap support for L0PEJ1 as seed ortholog is 100%.
Bootstrap support for I3LVV2 as seed ortholog is 100%.

Group of orthologs #500. Best score 282 bits
Score difference with first non-orthologous sequence - P.jiroveci:282 S.tridecemlineatus:282

L0PDY1              	100.00%		I3M4B7              	100.00%
                    	       		I3NEC2              	37.74%
                    	       		I3N2N3              	30.77%
Bootstrap support for L0PDY1 as seed ortholog is 100%.
Bootstrap support for I3M4B7 as seed ortholog is 100%.

Group of orthologs #501. Best score 282 bits
Score difference with first non-orthologous sequence - P.jiroveci:282 S.tridecemlineatus:187

L0PHJ3              	100.00%		I3LX53              	100.00%
Bootstrap support for L0PHJ3 as seed ortholog is 100%.
Bootstrap support for I3LX53 as seed ortholog is 100%.

Group of orthologs #502. Best score 282 bits
Score difference with first non-orthologous sequence - P.jiroveci:183 S.tridecemlineatus:85

L0PC59              	100.00%		I3NF44              	100.00%
Bootstrap support for L0PC59 as seed ortholog is 100%.
Bootstrap support for I3NF44 as seed ortholog is 100%.

Group of orthologs #503. Best score 281 bits
Score difference with first non-orthologous sequence - P.jiroveci:281 S.tridecemlineatus:220

L0P865              	100.00%		I3LW47              	100.00%
Bootstrap support for L0P865 as seed ortholog is 100%.
Bootstrap support for I3LW47 as seed ortholog is 100%.

Group of orthologs #504. Best score 280 bits
Score difference with first non-orthologous sequence - P.jiroveci:280 S.tridecemlineatus:230

L0PC61              	100.00%		I3MH78              	100.00%
Bootstrap support for L0PC61 as seed ortholog is 100%.
Bootstrap support for I3MH78 as seed ortholog is 100%.

Group of orthologs #505. Best score 280 bits
Score difference with first non-orthologous sequence - P.jiroveci:280 S.tridecemlineatus:280

L0PDA9              	100.00%		I3MMJ6              	100.00%
Bootstrap support for L0PDA9 as seed ortholog is 100%.
Bootstrap support for I3MMJ6 as seed ortholog is 100%.

Group of orthologs #506. Best score 279 bits
Score difference with first non-orthologous sequence - P.jiroveci:279 S.tridecemlineatus:108

L0PCG0              	100.00%		I3M4I1              	100.00%
Bootstrap support for L0PCG0 as seed ortholog is 100%.
Bootstrap support for I3M4I1 as seed ortholog is 99%.

Group of orthologs #507. Best score 279 bits
Score difference with first non-orthologous sequence - P.jiroveci:279 S.tridecemlineatus:145

L0PCW8              	100.00%		I3M4B2              	100.00%
Bootstrap support for L0PCW8 as seed ortholog is 100%.
Bootstrap support for I3M4B2 as seed ortholog is 99%.

Group of orthologs #508. Best score 279 bits
Score difference with first non-orthologous sequence - P.jiroveci:279 S.tridecemlineatus:215

L0PIR9              	100.00%		I3MET3              	100.00%
Bootstrap support for L0PIR9 as seed ortholog is 100%.
Bootstrap support for I3MET3 as seed ortholog is 100%.

Group of orthologs #509. Best score 279 bits
Score difference with first non-orthologous sequence - P.jiroveci:279 S.tridecemlineatus:279

L0PEV9              	100.00%		I3MKE1              	100.00%
Bootstrap support for L0PEV9 as seed ortholog is 100%.
Bootstrap support for I3MKE1 as seed ortholog is 100%.

Group of orthologs #510. Best score 279 bits
Score difference with first non-orthologous sequence - P.jiroveci:279 S.tridecemlineatus:279

L0PAQ1              	100.00%		I3NA61              	100.00%
Bootstrap support for L0PAQ1 as seed ortholog is 100%.
Bootstrap support for I3NA61 as seed ortholog is 100%.

Group of orthologs #511. Best score 277 bits
Score difference with first non-orthologous sequence - P.jiroveci:277 S.tridecemlineatus:277

L0PAD9              	100.00%		I3MLA4              	100.00%
Bootstrap support for L0PAD9 as seed ortholog is 100%.
Bootstrap support for I3MLA4 as seed ortholog is 100%.

Group of orthologs #512. Best score 276 bits
Score difference with first non-orthologous sequence - P.jiroveci:276 S.tridecemlineatus:276

L0P9T2              	100.00%		I3M8W9              	100.00%
                    	       		I3N2Y4              	31.98%
Bootstrap support for L0P9T2 as seed ortholog is 100%.
Bootstrap support for I3M8W9 as seed ortholog is 100%.

Group of orthologs #513. Best score 276 bits
Score difference with first non-orthologous sequence - P.jiroveci:276 S.tridecemlineatus:276

L0P9T5              	100.00%		I3MHQ5              	100.00%
Bootstrap support for L0P9T5 as seed ortholog is 100%.
Bootstrap support for I3MHQ5 as seed ortholog is 100%.

Group of orthologs #514. Best score 276 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 S.tridecemlineatus:276

L0PBH8              	100.00%		I3MXQ6              	100.00%
Bootstrap support for L0PBH8 as seed ortholog is 100%.
Bootstrap support for I3MXQ6 as seed ortholog is 100%.

Group of orthologs #515. Best score 276 bits
Score difference with first non-orthologous sequence - P.jiroveci:276 S.tridecemlineatus:223

L0PHN0              	100.00%		I3MY87              	100.00%
Bootstrap support for L0PHN0 as seed ortholog is 100%.
Bootstrap support for I3MY87 as seed ortholog is 100%.

Group of orthologs #516. Best score 275 bits
Score difference with first non-orthologous sequence - P.jiroveci:275 S.tridecemlineatus:275

L0PEB1              	100.00%		I3N1M7              	100.00%
                    	       		I3M564              	37.87%
Bootstrap support for L0PEB1 as seed ortholog is 100%.
Bootstrap support for I3N1M7 as seed ortholog is 100%.

Group of orthologs #517. Best score 275 bits
Score difference with first non-orthologous sequence - P.jiroveci:275 S.tridecemlineatus:275

L0P7Q3              	100.00%		I3MI43              	100.00%
Bootstrap support for L0P7Q3 as seed ortholog is 100%.
Bootstrap support for I3MI43 as seed ortholog is 100%.

Group of orthologs #518. Best score 275 bits
Score difference with first non-orthologous sequence - P.jiroveci:275 S.tridecemlineatus:275

L0PGV8              	100.00%		I3MEG7              	100.00%
Bootstrap support for L0PGV8 as seed ortholog is 100%.
Bootstrap support for I3MEG7 as seed ortholog is 100%.

Group of orthologs #519. Best score 274 bits
Score difference with first non-orthologous sequence - P.jiroveci:274 S.tridecemlineatus:274

L0PE17              	100.00%		I3M7J9              	100.00%
Bootstrap support for L0PE17 as seed ortholog is 100%.
Bootstrap support for I3M7J9 as seed ortholog is 100%.

Group of orthologs #520. Best score 273 bits
Score difference with first non-orthologous sequence - P.jiroveci:273 S.tridecemlineatus:273

L0PGF2              	100.00%		I3LYZ2              	100.00%
                    	       		I3M7B1              	20.47%
Bootstrap support for L0PGF2 as seed ortholog is 100%.
Bootstrap support for I3LYZ2 as seed ortholog is 100%.

Group of orthologs #521. Best score 273 bits
Score difference with first non-orthologous sequence - P.jiroveci:273 S.tridecemlineatus:75

L0PCJ2              	100.00%		I3M957              	100.00%
                    	       		I3N6J0              	21.35%
Bootstrap support for L0PCJ2 as seed ortholog is 100%.
Bootstrap support for I3M957 as seed ortholog is 99%.

Group of orthologs #522. Best score 273 bits
Score difference with first non-orthologous sequence - P.jiroveci:215 S.tridecemlineatus:134

L0PGP6              	100.00%		I3NDD6              	100.00%
                    	       		I3MMB4              	32.37%
Bootstrap support for L0PGP6 as seed ortholog is 100%.
Bootstrap support for I3NDD6 as seed ortholog is 100%.

Group of orthologs #523. Best score 272 bits
Score difference with first non-orthologous sequence - P.jiroveci:163 S.tridecemlineatus:109

L0P9E4              	100.00%		I3MD93              	100.00%
                    	       		I3M3Y7              	87.50%
                    	       		I3N808              	84.38%
                    	       		I3NE07              	31.25%
                    	       		I3LZS4              	29.17%
Bootstrap support for L0P9E4 as seed ortholog is 100%.
Bootstrap support for I3MD93 as seed ortholog is 99%.

Group of orthologs #524. Best score 272 bits
Score difference with first non-orthologous sequence - P.jiroveci:272 S.tridecemlineatus:272

L0P9W3              	100.00%		I3M1J8              	100.00%
Bootstrap support for L0P9W3 as seed ortholog is 100%.
Bootstrap support for I3M1J8 as seed ortholog is 100%.

Group of orthologs #525. Best score 272 bits
Score difference with first non-orthologous sequence - P.jiroveci:222 S.tridecemlineatus:202

L0PHK8              	100.00%		I3LWH5              	100.00%
Bootstrap support for L0PHK8 as seed ortholog is 100%.
Bootstrap support for I3LWH5 as seed ortholog is 100%.

Group of orthologs #526. Best score 272 bits
Score difference with first non-orthologous sequence - P.jiroveci:272 S.tridecemlineatus:272

L0PFU1              	100.00%		I3MFT1              	100.00%
Bootstrap support for L0PFU1 as seed ortholog is 100%.
Bootstrap support for I3MFT1 as seed ortholog is 100%.

Group of orthologs #527. Best score 271 bits
Score difference with first non-orthologous sequence - P.jiroveci:24 S.tridecemlineatus:50

L0PAI9              	100.00%		I3N8Y6              	100.00%
                    	       		I3NCX2              	100.00%
                    	       		I3MG08              	41.28%
                    	       		I3M134              	29.57%
                    	       		I3MKU8              	15.62%
                    	       		I3N882              	10.09%
                    	       		I3MB22              	8.14%
Bootstrap support for L0PAI9 as seed ortholog is 75%.
Bootstrap support for I3N8Y6 as seed ortholog is 92%.
Bootstrap support for I3NCX2 as seed ortholog is 86%.

Group of orthologs #528. Best score 270 bits
Score difference with first non-orthologous sequence - P.jiroveci:270 S.tridecemlineatus:270

L0PA72              	100.00%		I3MD24              	100.00%
                    	       		I3M6L6              	12.03%
Bootstrap support for L0PA72 as seed ortholog is 100%.
Bootstrap support for I3MD24 as seed ortholog is 100%.

Group of orthologs #529. Best score 270 bits
Score difference with first non-orthologous sequence - P.jiroveci:270 S.tridecemlineatus:270

L0P7L7              	100.00%		I3MPI2              	100.00%
Bootstrap support for L0P7L7 as seed ortholog is 100%.
Bootstrap support for I3MPI2 as seed ortholog is 100%.

Group of orthologs #530. Best score 270 bits
Score difference with first non-orthologous sequence - P.jiroveci:270 S.tridecemlineatus:270

L0PI09              	100.00%		I3N5E6              	100.00%
Bootstrap support for L0PI09 as seed ortholog is 100%.
Bootstrap support for I3N5E6 as seed ortholog is 100%.

Group of orthologs #531. Best score 269 bits
Score difference with first non-orthologous sequence - P.jiroveci:269 S.tridecemlineatus:269

L0PE74              	100.00%		I3M425              	100.00%
                    	       		I3N5E7              	33.33%
                    	       		I3M552              	28.36%
Bootstrap support for L0PE74 as seed ortholog is 100%.
Bootstrap support for I3M425 as seed ortholog is 100%.

Group of orthologs #532. Best score 269 bits
Score difference with first non-orthologous sequence - P.jiroveci:269 S.tridecemlineatus:83

L0PEG2              	100.00%		I3M581              	100.00%
Bootstrap support for L0PEG2 as seed ortholog is 100%.
Bootstrap support for I3M581 as seed ortholog is 96%.

Group of orthologs #533. Best score 267 bits
Score difference with first non-orthologous sequence - P.jiroveci:267 S.tridecemlineatus:267

L0PDT4              	100.00%		I3LY19              	100.00%
                    	       		I3LYZ6              	34.77%
Bootstrap support for L0PDT4 as seed ortholog is 100%.
Bootstrap support for I3LY19 as seed ortholog is 100%.

Group of orthologs #534. Best score 267 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 S.tridecemlineatus:46

L0PDD3              	100.00%		I3MHK8              	100.00%
                    	       		I3NFM4              	43.96%
Bootstrap support for L0PDD3 as seed ortholog is 99%.
Bootstrap support for I3MHK8 as seed ortholog is 96%.

Group of orthologs #535. Best score 267 bits
Score difference with first non-orthologous sequence - P.jiroveci:267 S.tridecemlineatus:267

L0P6P2              	100.00%		I3NB63              	100.00%
                    	       		I3MCW0              	49.01%
Bootstrap support for L0P6P2 as seed ortholog is 100%.
Bootstrap support for I3NB63 as seed ortholog is 100%.

Group of orthologs #536. Best score 267 bits
Score difference with first non-orthologous sequence - P.jiroveci:267 S.tridecemlineatus:216

L0P8L5              	100.00%		I3M261              	100.00%
Bootstrap support for L0P8L5 as seed ortholog is 100%.
Bootstrap support for I3M261 as seed ortholog is 100%.

Group of orthologs #537. Best score 267 bits
Score difference with first non-orthologous sequence - P.jiroveci:267 S.tridecemlineatus:267

L0PDJ2              	100.00%		I3MED5              	100.00%
Bootstrap support for L0PDJ2 as seed ortholog is 100%.
Bootstrap support for I3MED5 as seed ortholog is 100%.

Group of orthologs #538. Best score 267 bits
Score difference with first non-orthologous sequence - P.jiroveci:267 S.tridecemlineatus:267

L0PBB3              	100.00%		I3MQS0              	100.00%
Bootstrap support for L0PBB3 as seed ortholog is 100%.
Bootstrap support for I3MQS0 as seed ortholog is 100%.

Group of orthologs #539. Best score 266 bits
Score difference with first non-orthologous sequence - P.jiroveci:266 S.tridecemlineatus:123

L0PDT8              	100.00%		I3N1M9              	100.00%
L0P9R2              	89.92%		
Bootstrap support for L0PDT8 as seed ortholog is 100%.
Bootstrap support for I3N1M9 as seed ortholog is 99%.

Group of orthologs #540. Best score 265 bits
Score difference with first non-orthologous sequence - P.jiroveci:265 S.tridecemlineatus:118

L0PGD7              	100.00%		I3MLI2              	100.00%
L0PGQ0              	54.71%		I3M8L1              	66.27%
                    	       		I3M0S3              	13.25%
Bootstrap support for L0PGD7 as seed ortholog is 100%.
Bootstrap support for I3MLI2 as seed ortholog is 99%.

Group of orthologs #541. Best score 265 bits
Score difference with first non-orthologous sequence - P.jiroveci:265 S.tridecemlineatus:157

L0PDR6              	100.00%		I3MH73              	100.00%
                    	       		I3MIM6              	84.62%
Bootstrap support for L0PDR6 as seed ortholog is 100%.
Bootstrap support for I3MH73 as seed ortholog is 99%.

Group of orthologs #542. Best score 265 bits
Score difference with first non-orthologous sequence - P.jiroveci:265 S.tridecemlineatus:265

L0P9B8              	100.00%		I3MTB7              	100.00%
Bootstrap support for L0P9B8 as seed ortholog is 100%.
Bootstrap support for I3MTB7 as seed ortholog is 100%.

Group of orthologs #543. Best score 265 bits
Score difference with first non-orthologous sequence - P.jiroveci:265 S.tridecemlineatus:265

L0PG08              	100.00%		I3MW42              	100.00%
Bootstrap support for L0PG08 as seed ortholog is 100%.
Bootstrap support for I3MW42 as seed ortholog is 100%.

Group of orthologs #544. Best score 264 bits
Score difference with first non-orthologous sequence - P.jiroveci:264 S.tridecemlineatus:147

L0PBM0              	100.00%		I3N1P8              	100.00%
                    	       		I3MN47              	13.48%
Bootstrap support for L0PBM0 as seed ortholog is 100%.
Bootstrap support for I3N1P8 as seed ortholog is 99%.

Group of orthologs #545. Best score 263 bits
Score difference with first non-orthologous sequence - P.jiroveci:263 S.tridecemlineatus:91

L0PDF9              	100.00%		I3MR36              	100.00%
                    	       		I3MC47              	79.78%
                    	       		I3MIT0              	75.11%
                    	       		I3NCI9              	53.11%
                    	       		I3MC55              	50.89%
                    	       		I3MR28              	50.89%
                    	       		I3MM56              	47.33%
                    	       		I3MAB6              	23.56%
                    	       		I3N9S3              	16.89%
Bootstrap support for L0PDF9 as seed ortholog is 100%.
Bootstrap support for I3MR36 as seed ortholog is 99%.

Group of orthologs #546. Best score 262 bits
Score difference with first non-orthologous sequence - P.jiroveci:182 S.tridecemlineatus:193

L0PF24              	100.00%		I3MFN1              	100.00%
                    	       		I3MSE8              	84.84%
                    	       		I3M5N1              	80.77%
                    	       		I3MQ00              	78.96%
                    	       		I3MM57              	12.90%
Bootstrap support for L0PF24 as seed ortholog is 100%.
Bootstrap support for I3MFN1 as seed ortholog is 100%.

Group of orthologs #547. Best score 259 bits
Score difference with first non-orthologous sequence - P.jiroveci:259 S.tridecemlineatus:67

L0P7Q7              	100.00%		I3MTB9              	100.00%
L0PGL4              	93.98%		
Bootstrap support for L0P7Q7 as seed ortholog is 100%.
Bootstrap support for I3MTB9 as seed ortholog is 64%.
Alternative seed ortholog is I3MN48 (67 bits away from this cluster)

Group of orthologs #548. Best score 257 bits
Score difference with first non-orthologous sequence - P.jiroveci:257 S.tridecemlineatus:257

L0PCH0              	100.00%		I3LWT2              	100.00%
                    	       		I3MVN3              	67.06%
                    	       		I3M0F5              	66.01%
                    	       		I3M3J6              	45.06%
                    	       		I3M106              	31.23%
Bootstrap support for L0PCH0 as seed ortholog is 100%.
Bootstrap support for I3LWT2 as seed ortholog is 100%.

Group of orthologs #549. Best score 257 bits
Score difference with first non-orthologous sequence - P.jiroveci:257 S.tridecemlineatus:158

L0PAM8              	100.00%		I3M525              	100.00%
Bootstrap support for L0PAM8 as seed ortholog is 100%.
Bootstrap support for I3M525 as seed ortholog is 99%.

Group of orthologs #550. Best score 257 bits
Score difference with first non-orthologous sequence - P.jiroveci:257 S.tridecemlineatus:257

L0PFX9              	100.00%		I3MNS3              	100.00%
Bootstrap support for L0PFX9 as seed ortholog is 100%.
Bootstrap support for I3MNS3 as seed ortholog is 100%.

Group of orthologs #551. Best score 257 bits
Score difference with first non-orthologous sequence - P.jiroveci:157 S.tridecemlineatus:156

L0PFK0              	100.00%		I3MRD9              	100.00%
Bootstrap support for L0PFK0 as seed ortholog is 99%.
Bootstrap support for I3MRD9 as seed ortholog is 99%.

Group of orthologs #552. Best score 256 bits
Score difference with first non-orthologous sequence - P.jiroveci:256 S.tridecemlineatus:162

L0PI36              	100.00%		I3MCM7              	100.00%
Bootstrap support for L0PI36 as seed ortholog is 100%.
Bootstrap support for I3MCM7 as seed ortholog is 99%.

Group of orthologs #553. Best score 255 bits
Score difference with first non-orthologous sequence - P.jiroveci:255 S.tridecemlineatus:214

L0P9F7              	100.00%		I3M181              	100.00%
L0PGP0              	82.59%		
Bootstrap support for L0P9F7 as seed ortholog is 100%.
Bootstrap support for I3M181 as seed ortholog is 100%.

Group of orthologs #554. Best score 255 bits
Score difference with first non-orthologous sequence - P.jiroveci:255 S.tridecemlineatus:255

L0P7C4              	100.00%		I3LWB5              	100.00%
Bootstrap support for L0P7C4 as seed ortholog is 100%.
Bootstrap support for I3LWB5 as seed ortholog is 100%.

Group of orthologs #555. Best score 255 bits
Score difference with first non-orthologous sequence - P.jiroveci:255 S.tridecemlineatus:255

L0P9M9              	100.00%		I3M7Y9              	100.00%
Bootstrap support for L0P9M9 as seed ortholog is 100%.
Bootstrap support for I3M7Y9 as seed ortholog is 100%.

Group of orthologs #556. Best score 255 bits
Score difference with first non-orthologous sequence - P.jiroveci:192 S.tridecemlineatus:173

L0PFY7              	100.00%		I3M911              	100.00%
Bootstrap support for L0PFY7 as seed ortholog is 100%.
Bootstrap support for I3M911 as seed ortholog is 100%.

Group of orthologs #557. Best score 254 bits
Score difference with first non-orthologous sequence - P.jiroveci:254 S.tridecemlineatus:254

L0PCC1              	100.00%		I3LZD9              	100.00%
Bootstrap support for L0PCC1 as seed ortholog is 100%.
Bootstrap support for I3LZD9 as seed ortholog is 100%.

Group of orthologs #558. Best score 254 bits
Score difference with first non-orthologous sequence - P.jiroveci:254 S.tridecemlineatus:254

L0PES4              	100.00%		I3MHY0              	100.00%
Bootstrap support for L0PES4 as seed ortholog is 100%.
Bootstrap support for I3MHY0 as seed ortholog is 100%.

Group of orthologs #559. Best score 253 bits
Score difference with first non-orthologous sequence - P.jiroveci:201 S.tridecemlineatus:206

L0P895              	100.00%		I3LZ79              	100.00%
Bootstrap support for L0P895 as seed ortholog is 100%.
Bootstrap support for I3LZ79 as seed ortholog is 100%.

Group of orthologs #560. Best score 253 bits
Score difference with first non-orthologous sequence - P.jiroveci:253 S.tridecemlineatus:253

L0PB61              	100.00%		I3M5M2              	100.00%
Bootstrap support for L0PB61 as seed ortholog is 100%.
Bootstrap support for I3M5M2 as seed ortholog is 100%.

Group of orthologs #561. Best score 252 bits
Score difference with first non-orthologous sequence - P.jiroveci:252 S.tridecemlineatus:252

L0PDN4              	100.00%		I3MG95              	100.00%
                    	       		I3MCC1              	32.88%
Bootstrap support for L0PDN4 as seed ortholog is 100%.
Bootstrap support for I3MG95 as seed ortholog is 100%.

Group of orthologs #562. Best score 252 bits
Score difference with first non-orthologous sequence - P.jiroveci:252 S.tridecemlineatus:252

L0P723              	100.00%		I3N2A9              	100.00%
                    	       		I3NFM9              	30.16%
Bootstrap support for L0P723 as seed ortholog is 100%.
Bootstrap support for I3N2A9 as seed ortholog is 100%.

Group of orthologs #563. Best score 252 bits
Score difference with first non-orthologous sequence - P.jiroveci:73 S.tridecemlineatus:114

L0PA17              	100.00%		I3MAR3              	100.00%
Bootstrap support for L0PA17 as seed ortholog is 99%.
Bootstrap support for I3MAR3 as seed ortholog is 100%.

Group of orthologs #564. Best score 252 bits
Score difference with first non-orthologous sequence - P.jiroveci:252 S.tridecemlineatus:123

L0PHI3              	100.00%		I3MF32              	100.00%
Bootstrap support for L0PHI3 as seed ortholog is 100%.
Bootstrap support for I3MF32 as seed ortholog is 99%.

Group of orthologs #565. Best score 252 bits
Score difference with first non-orthologous sequence - P.jiroveci:252 S.tridecemlineatus:252

L0P914              	100.00%		I3N8Y4              	100.00%
Bootstrap support for L0P914 as seed ortholog is 100%.
Bootstrap support for I3N8Y4 as seed ortholog is 100%.

Group of orthologs #566. Best score 251 bits
Score difference with first non-orthologous sequence - P.jiroveci:173 S.tridecemlineatus:251

L0PBY9              	100.00%		I3MIR4              	100.00%
Bootstrap support for L0PBY9 as seed ortholog is 100%.
Bootstrap support for I3MIR4 as seed ortholog is 100%.

Group of orthologs #567. Best score 251 bits
Score difference with first non-orthologous sequence - P.jiroveci:251 S.tridecemlineatus:93

L0PEX1              	100.00%		I3MQT7              	100.00%
Bootstrap support for L0PEX1 as seed ortholog is 100%.
Bootstrap support for I3MQT7 as seed ortholog is 99%.

Group of orthologs #568. Best score 250 bits
Score difference with first non-orthologous sequence - P.jiroveci:250 S.tridecemlineatus:250

L0PGV2              	100.00%		I3M6J2              	100.00%
L0PG40              	61.56%		
Bootstrap support for L0PGV2 as seed ortholog is 100%.
Bootstrap support for I3M6J2 as seed ortholog is 100%.

Group of orthologs #569. Best score 250 bits
Score difference with first non-orthologous sequence - P.jiroveci:250 S.tridecemlineatus:50

L0PAA3              	100.00%		I3MI49              	100.00%
                    	       		I3MUI8              	16.64%
Bootstrap support for L0PAA3 as seed ortholog is 100%.
Bootstrap support for I3MI49 as seed ortholog is 93%.

Group of orthologs #570. Best score 250 bits
Score difference with first non-orthologous sequence - P.jiroveci:250 S.tridecemlineatus:185

L0P949              	100.00%		I3M2V0              	100.00%
Bootstrap support for L0P949 as seed ortholog is 100%.
Bootstrap support for I3M2V0 as seed ortholog is 100%.

Group of orthologs #571. Best score 250 bits
Score difference with first non-orthologous sequence - P.jiroveci:250 S.tridecemlineatus:250

L0PCG1              	100.00%		I3MDV8              	100.00%
Bootstrap support for L0PCG1 as seed ortholog is 100%.
Bootstrap support for I3MDV8 as seed ortholog is 100%.

Group of orthologs #572. Best score 249 bits
Score difference with first non-orthologous sequence - P.jiroveci:249 S.tridecemlineatus:249

L0P896              	100.00%		I3MI69              	100.00%
Bootstrap support for L0P896 as seed ortholog is 100%.
Bootstrap support for I3MI69 as seed ortholog is 100%.

Group of orthologs #573. Best score 248 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 S.tridecemlineatus:35

L0PGH8              	100.00%		I3MH90              	100.00%
Bootstrap support for L0PGH8 as seed ortholog is 99%.
Bootstrap support for I3MH90 as seed ortholog is 77%.

Group of orthologs #574. Best score 248 bits
Score difference with first non-orthologous sequence - P.jiroveci:248 S.tridecemlineatus:141

L0PCQ6              	100.00%		I3MPW8              	100.00%
Bootstrap support for L0PCQ6 as seed ortholog is 100%.
Bootstrap support for I3MPW8 as seed ortholog is 99%.

Group of orthologs #575. Best score 247 bits
Score difference with first non-orthologous sequence - P.jiroveci:247 S.tridecemlineatus:247

L0P9R7              	100.00%		I3M4P4              	100.00%
Bootstrap support for L0P9R7 as seed ortholog is 100%.
Bootstrap support for I3M4P4 as seed ortholog is 100%.

Group of orthologs #576. Best score 246 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 S.tridecemlineatus:78

L0P876              	100.00%		I3ML31              	100.00%
                    	       		I3M959              	45.71%
                    	       		I3MW74              	22.86%
                    	       		I3NGQ5              	22.86%
                    	       		I3M0S6              	14.29%
Bootstrap support for L0P876 as seed ortholog is 100%.
Bootstrap support for I3ML31 as seed ortholog is 99%.

Group of orthologs #577. Best score 246 bits
Score difference with first non-orthologous sequence - P.jiroveci:246 S.tridecemlineatus:41

L0P7B5              	100.00%		I3MGD5              	100.00%
Bootstrap support for L0P7B5 as seed ortholog is 100%.
Bootstrap support for I3MGD5 as seed ortholog is 87%.

Group of orthologs #578. Best score 245 bits
Score difference with first non-orthologous sequence - P.jiroveci:245 S.tridecemlineatus:245

L0PG93              	100.00%		I3LYV9              	100.00%
Bootstrap support for L0PG93 as seed ortholog is 100%.
Bootstrap support for I3LYV9 as seed ortholog is 100%.

Group of orthologs #579. Best score 245 bits
Score difference with first non-orthologous sequence - P.jiroveci:245 S.tridecemlineatus:159

L0PFQ3              	100.00%		I3MG70              	100.00%
Bootstrap support for L0PFQ3 as seed ortholog is 100%.
Bootstrap support for I3MG70 as seed ortholog is 99%.

Group of orthologs #580. Best score 245 bits
Score difference with first non-orthologous sequence - P.jiroveci:245 S.tridecemlineatus:245

L0PFJ6              	100.00%		I3N8Z0              	100.00%
Bootstrap support for L0PFJ6 as seed ortholog is 100%.
Bootstrap support for I3N8Z0 as seed ortholog is 100%.

Group of orthologs #581. Best score 244 bits
Score difference with first non-orthologous sequence - P.jiroveci:244 S.tridecemlineatus:244

L0PA36              	100.00%		I3LZR6              	100.00%
Bootstrap support for L0PA36 as seed ortholog is 100%.
Bootstrap support for I3LZR6 as seed ortholog is 100%.

Group of orthologs #582. Best score 244 bits
Score difference with first non-orthologous sequence - P.jiroveci:244 S.tridecemlineatus:244

L0PDS2              	100.00%		I3NFM8              	100.00%
Bootstrap support for L0PDS2 as seed ortholog is 100%.
Bootstrap support for I3NFM8 as seed ortholog is 100%.

Group of orthologs #583. Best score 243 bits
Score difference with first non-orthologous sequence - P.jiroveci:243 S.tridecemlineatus:243

L0PCR8              	100.00%		I3N930              	100.00%
L0PH75              	90.76%		
Bootstrap support for L0PCR8 as seed ortholog is 100%.
Bootstrap support for I3N930 as seed ortholog is 100%.

Group of orthologs #584. Best score 243 bits
Score difference with first non-orthologous sequence - P.jiroveci:243 S.tridecemlineatus:182

L0PAG1              	100.00%		I3LZ27              	100.00%
Bootstrap support for L0PAG1 as seed ortholog is 100%.
Bootstrap support for I3LZ27 as seed ortholog is 99%.

Group of orthologs #585. Best score 243 bits
Score difference with first non-orthologous sequence - P.jiroveci:243 S.tridecemlineatus:243

L0PGQ4              	100.00%		I3MMX2              	100.00%
Bootstrap support for L0PGQ4 as seed ortholog is 100%.
Bootstrap support for I3MMX2 as seed ortholog is 100%.

Group of orthologs #586. Best score 243 bits
Score difference with first non-orthologous sequence - P.jiroveci:243 S.tridecemlineatus:11

L0PC75              	100.00%		I3N998              	100.00%
Bootstrap support for L0PC75 as seed ortholog is 100%.
Bootstrap support for I3N998 as seed ortholog is 69%.
Alternative seed ortholog is I3LYQ1 (11 bits away from this cluster)

Group of orthologs #587. Best score 242 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 S.tridecemlineatus:169

L0PBS3              	100.00%		I3M0U8              	100.00%
Bootstrap support for L0PBS3 as seed ortholog is 100%.
Bootstrap support for I3M0U8 as seed ortholog is 100%.

Group of orthologs #588. Best score 242 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 S.tridecemlineatus:242

L0P7H2              	100.00%		I3MGS6              	100.00%
Bootstrap support for L0P7H2 as seed ortholog is 100%.
Bootstrap support for I3MGS6 as seed ortholog is 100%.

Group of orthologs #589. Best score 242 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 S.tridecemlineatus:242

L0PHK5              	100.00%		I3MU01              	100.00%
Bootstrap support for L0PHK5 as seed ortholog is 100%.
Bootstrap support for I3MU01 as seed ortholog is 100%.

Group of orthologs #590. Best score 242 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 S.tridecemlineatus:242

L0PHL0              	100.00%		I3NGU6              	100.00%
Bootstrap support for L0PHL0 as seed ortholog is 100%.
Bootstrap support for I3NGU6 as seed ortholog is 100%.

Group of orthologs #591. Best score 241 bits
Score difference with first non-orthologous sequence - P.jiroveci:241 S.tridecemlineatus:191

L0PG86              	100.00%		I3MI35              	100.00%
Bootstrap support for L0PG86 as seed ortholog is 100%.
Bootstrap support for I3MI35 as seed ortholog is 100%.

Group of orthologs #592. Best score 240 bits
Score difference with first non-orthologous sequence - P.jiroveci:240 S.tridecemlineatus:240

L0PBG0              	100.00%		I3N4F5              	100.00%
Bootstrap support for L0PBG0 as seed ortholog is 100%.
Bootstrap support for I3N4F5 as seed ortholog is 100%.

Group of orthologs #593. Best score 239 bits
Score difference with first non-orthologous sequence - P.jiroveci:239 S.tridecemlineatus:239

L0PID4              	100.00%		I3M6I0              	100.00%
L0PGF7              	33.45%		
Bootstrap support for L0PID4 as seed ortholog is 100%.
Bootstrap support for I3M6I0 as seed ortholog is 100%.

Group of orthologs #594. Best score 239 bits
Score difference with first non-orthologous sequence - P.jiroveci:239 S.tridecemlineatus:239

L0P8F0              	100.00%		I3MCD2              	100.00%
Bootstrap support for L0P8F0 as seed ortholog is 100%.
Bootstrap support for I3MCD2 as seed ortholog is 100%.

Group of orthologs #595. Best score 239 bits
Score difference with first non-orthologous sequence - P.jiroveci:239 S.tridecemlineatus:190

L0PFC0              	100.00%		I3MPR2              	100.00%
Bootstrap support for L0PFC0 as seed ortholog is 100%.
Bootstrap support for I3MPR2 as seed ortholog is 100%.

Group of orthologs #596. Best score 239 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 S.tridecemlineatus:148

L0P9F9              	100.00%		Q2EF73              	100.00%
Bootstrap support for L0P9F9 as seed ortholog is 100%.
Bootstrap support for Q2EF73 as seed ortholog is 100%.

Group of orthologs #597. Best score 238 bits
Score difference with first non-orthologous sequence - P.jiroveci:238 S.tridecemlineatus:238

L0PBP9              	100.00%		I3LYF3              	100.00%
Bootstrap support for L0PBP9 as seed ortholog is 100%.
Bootstrap support for I3LYF3 as seed ortholog is 100%.

Group of orthologs #598. Best score 238 bits
Score difference with first non-orthologous sequence - P.jiroveci:238 S.tridecemlineatus:238

L0PF73              	100.00%		I3N8X9              	100.00%
Bootstrap support for L0PF73 as seed ortholog is 100%.
Bootstrap support for I3N8X9 as seed ortholog is 100%.

Group of orthologs #599. Best score 237 bits
Score difference with first non-orthologous sequence - P.jiroveci:142 S.tridecemlineatus:111

L0PFE3              	100.00%		I3MCN8              	100.00%
                    	       		I3MLY7              	44.24%
                    	       		I3M591              	41.39%
                    	       		I3MDT4              	38.66%
Bootstrap support for L0PFE3 as seed ortholog is 99%.
Bootstrap support for I3MCN8 as seed ortholog is 99%.

Group of orthologs #600. Best score 237 bits
Score difference with first non-orthologous sequence - P.jiroveci:237 S.tridecemlineatus:237

L0PE58              	100.00%		I3M0D5              	100.00%
Bootstrap support for L0PE58 as seed ortholog is 100%.
Bootstrap support for I3M0D5 as seed ortholog is 100%.

Group of orthologs #601. Best score 237 bits
Score difference with first non-orthologous sequence - P.jiroveci:237 S.tridecemlineatus:237

L0PA55              	100.00%		I3N8K9              	100.00%
Bootstrap support for L0PA55 as seed ortholog is 100%.
Bootstrap support for I3N8K9 as seed ortholog is 100%.

Group of orthologs #602. Best score 236 bits
Score difference with first non-orthologous sequence - P.jiroveci:236 S.tridecemlineatus:236

L0PBE0              	100.00%		I3M1G1              	100.00%
                    	       		I3MYX0              	14.98%
Bootstrap support for L0PBE0 as seed ortholog is 100%.
Bootstrap support for I3M1G1 as seed ortholog is 100%.

Group of orthologs #603. Best score 236 bits
Score difference with first non-orthologous sequence - P.jiroveci:177 S.tridecemlineatus:114

L0PGN9              	100.00%		I3MK36              	100.00%
Bootstrap support for L0PGN9 as seed ortholog is 100%.
Bootstrap support for I3MK36 as seed ortholog is 99%.

Group of orthologs #604. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 S.tridecemlineatus:102

L0PIJ3              	100.00%		I3MFC8              	100.00%
L0PEP1              	83.24%		
Bootstrap support for L0PIJ3 as seed ortholog is 100%.
Bootstrap support for I3MFC8 as seed ortholog is 99%.

Group of orthologs #605. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 S.tridecemlineatus:235

L0PBA4              	100.00%		I3LX23              	100.00%
Bootstrap support for L0PBA4 as seed ortholog is 100%.
Bootstrap support for I3LX23 as seed ortholog is 100%.

Group of orthologs #606. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 S.tridecemlineatus:235

L0P834              	100.00%		I3M7D1              	100.00%
Bootstrap support for L0P834 as seed ortholog is 100%.
Bootstrap support for I3M7D1 as seed ortholog is 100%.

Group of orthologs #607. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 S.tridecemlineatus:235

L0PET8              	100.00%		I3MEQ3              	100.00%
Bootstrap support for L0PET8 as seed ortholog is 100%.
Bootstrap support for I3MEQ3 as seed ortholog is 100%.

Group of orthologs #608. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 S.tridecemlineatus:235

L0PG68              	100.00%		I3MFE3              	100.00%
Bootstrap support for L0PG68 as seed ortholog is 100%.
Bootstrap support for I3MFE3 as seed ortholog is 100%.

Group of orthologs #609. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 S.tridecemlineatus:235

L0P9N2              	100.00%		I3MPB0              	100.00%
Bootstrap support for L0P9N2 as seed ortholog is 100%.
Bootstrap support for I3MPB0 as seed ortholog is 100%.

Group of orthologs #610. Best score 234 bits
Score difference with first non-orthologous sequence - P.jiroveci:234 S.tridecemlineatus:234

L0PEN7              	100.00%		I3LWI7              	100.00%
Bootstrap support for L0PEN7 as seed ortholog is 100%.
Bootstrap support for I3LWI7 as seed ortholog is 100%.

Group of orthologs #611. Best score 234 bits
Score difference with first non-orthologous sequence - P.jiroveci:234 S.tridecemlineatus:234

L0PDH2              	100.00%		I3M8Q6              	100.00%
Bootstrap support for L0PDH2 as seed ortholog is 100%.
Bootstrap support for I3M8Q6 as seed ortholog is 100%.

Group of orthologs #612. Best score 234 bits
Score difference with first non-orthologous sequence - P.jiroveci:234 S.tridecemlineatus:234

L0PD44              	100.00%		I3MEB7              	100.00%
Bootstrap support for L0PD44 as seed ortholog is 100%.
Bootstrap support for I3MEB7 as seed ortholog is 100%.

Group of orthologs #613. Best score 234 bits
Score difference with first non-orthologous sequence - P.jiroveci:234 S.tridecemlineatus:234

L0PEY5              	100.00%		I3ML63              	100.00%
Bootstrap support for L0PEY5 as seed ortholog is 100%.
Bootstrap support for I3ML63 as seed ortholog is 100%.

Group of orthologs #614. Best score 234 bits
Score difference with first non-orthologous sequence - P.jiroveci:234 S.tridecemlineatus:234

L0PG81              	100.00%		I3NF49              	100.00%
Bootstrap support for L0PG81 as seed ortholog is 100%.
Bootstrap support for I3NF49 as seed ortholog is 100%.

Group of orthologs #615. Best score 233 bits
Score difference with first non-orthologous sequence - P.jiroveci:233 S.tridecemlineatus:233

L0P9G0              	100.00%		I3M7W3              	100.00%
                    	       		I3MDJ1              	32.54%
                    	       		I3LYR8              	31.54%
                    	       		I3MSY1              	22.87%
                    	       		I3LXA0              	19.57%
                    	       		I3N605              	16.92%
                    	       		I3MGD3              	14.70%
                    	       		I3MHS4              	11.04%
                    	       		I3MR14              	6.16%
                    	       		I3N4U4              	5.09%
                    	       		I3MBL6              	5.09%
Bootstrap support for L0P9G0 as seed ortholog is 100%.
Bootstrap support for I3M7W3 as seed ortholog is 100%.

Group of orthologs #616. Best score 233 bits
Score difference with first non-orthologous sequence - P.jiroveci:233 S.tridecemlineatus:233

L0P870              	100.00%		I3LVX9              	100.00%
Bootstrap support for L0P870 as seed ortholog is 100%.
Bootstrap support for I3LVX9 as seed ortholog is 100%.

Group of orthologs #617. Best score 233 bits
Score difference with first non-orthologous sequence - P.jiroveci:233 S.tridecemlineatus:233

L0PBC7              	100.00%		I3LYK1              	100.00%
Bootstrap support for L0PBC7 as seed ortholog is 100%.
Bootstrap support for I3LYK1 as seed ortholog is 100%.

Group of orthologs #618. Best score 233 bits
Score difference with first non-orthologous sequence - P.jiroveci:233 S.tridecemlineatus:233

L0P9G1              	100.00%		I3ML71              	100.00%
Bootstrap support for L0P9G1 as seed ortholog is 100%.
Bootstrap support for I3ML71 as seed ortholog is 100%.

Group of orthologs #619. Best score 233 bits
Score difference with first non-orthologous sequence - P.jiroveci:233 S.tridecemlineatus:233

L0P9C4              	100.00%		I3MQ17              	100.00%
Bootstrap support for L0P9C4 as seed ortholog is 100%.
Bootstrap support for I3MQ17 as seed ortholog is 100%.

Group of orthologs #620. Best score 233 bits
Score difference with first non-orthologous sequence - P.jiroveci:233 S.tridecemlineatus:233

L0PET6              	100.00%		I3MMA9              	100.00%
Bootstrap support for L0PET6 as seed ortholog is 100%.
Bootstrap support for I3MMA9 as seed ortholog is 100%.

Group of orthologs #621. Best score 232 bits
Score difference with first non-orthologous sequence - P.jiroveci:232 S.tridecemlineatus:232

L0PFW4              	100.00%		I3M6J5              	100.00%
Bootstrap support for L0PFW4 as seed ortholog is 100%.
Bootstrap support for I3M6J5 as seed ortholog is 100%.

Group of orthologs #622. Best score 231 bits
Score difference with first non-orthologous sequence - P.jiroveci:231 S.tridecemlineatus:231

L0P9K2              	100.00%		I3M1B5              	100.00%
                    	       		I3NHT4              	47.72%
Bootstrap support for L0P9K2 as seed ortholog is 100%.
Bootstrap support for I3M1B5 as seed ortholog is 100%.

Group of orthologs #623. Best score 231 bits
Score difference with first non-orthologous sequence - P.jiroveci:231 S.tridecemlineatus:231

L0PFE6              	100.00%		I3MJH6              	100.00%
                    	       		I3N955              	26.37%
Bootstrap support for L0PFE6 as seed ortholog is 100%.
Bootstrap support for I3MJH6 as seed ortholog is 100%.

Group of orthologs #624. Best score 231 bits
Score difference with first non-orthologous sequence - P.jiroveci:150 S.tridecemlineatus:231

L0PDI2              	100.00%		I3MZG0              	100.00%
Bootstrap support for L0PDI2 as seed ortholog is 97%.
Bootstrap support for I3MZG0 as seed ortholog is 100%.

Group of orthologs #625. Best score 230 bits
Score difference with first non-orthologous sequence - P.jiroveci:230 S.tridecemlineatus:104

L0PCI8              	100.00%		I3M3E1              	100.00%
                    	       		I3NEP8              	68.53%
                    	       		I3MFT8              	49.90%
                    	       		I3LZ98              	39.34%
Bootstrap support for L0PCI8 as seed ortholog is 100%.
Bootstrap support for I3M3E1 as seed ortholog is 99%.

Group of orthologs #626. Best score 230 bits
Score difference with first non-orthologous sequence - P.jiroveci:230 S.tridecemlineatus:152

L0P9I3              	100.00%		I3MRA9              	100.00%
Bootstrap support for L0P9I3 as seed ortholog is 100%.
Bootstrap support for I3MRA9 as seed ortholog is 100%.

Group of orthologs #627. Best score 229 bits
Score difference with first non-orthologous sequence - P.jiroveci:229 S.tridecemlineatus:229

L0P9Q8              	100.00%		I3M5H7              	100.00%
                    	       		I3MNM2              	36.18%
                    	       		I3MQL4              	27.30%
Bootstrap support for L0P9Q8 as seed ortholog is 100%.
Bootstrap support for I3M5H7 as seed ortholog is 100%.

Group of orthologs #628. Best score 229 bits
Score difference with first non-orthologous sequence - P.jiroveci:229 S.tridecemlineatus:229

L0PGD6              	100.00%		I3NAV7              	100.00%
Bootstrap support for L0PGD6 as seed ortholog is 100%.
Bootstrap support for I3NAV7 as seed ortholog is 100%.

Group of orthologs #629. Best score 228 bits
Score difference with first non-orthologous sequence - P.jiroveci:228 S.tridecemlineatus:228

L0PAZ5              	100.00%		I3MBM9              	100.00%
Bootstrap support for L0PAZ5 as seed ortholog is 100%.
Bootstrap support for I3MBM9 as seed ortholog is 100%.

Group of orthologs #630. Best score 228 bits
Score difference with first non-orthologous sequence - P.jiroveci:228 S.tridecemlineatus:228

L0P9P0              	100.00%		I3MPX6              	100.00%
Bootstrap support for L0P9P0 as seed ortholog is 100%.
Bootstrap support for I3MPX6 as seed ortholog is 100%.

Group of orthologs #631. Best score 228 bits
Score difference with first non-orthologous sequence - P.jiroveci:228 S.tridecemlineatus:182

L0PDB9              	100.00%		I3MZH1              	100.00%
Bootstrap support for L0PDB9 as seed ortholog is 100%.
Bootstrap support for I3MZH1 as seed ortholog is 99%.

Group of orthologs #632. Best score 227 bits
Score difference with first non-orthologous sequence - P.jiroveci:227 S.tridecemlineatus:227

L0PBZ1              	100.00%		I3M2V6              	100.00%
Bootstrap support for L0PBZ1 as seed ortholog is 100%.
Bootstrap support for I3M2V6 as seed ortholog is 100%.

Group of orthologs #633. Best score 226 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 S.tridecemlineatus:41

L0PGE5              	100.00%		I3N6B4              	100.00%
                    	       		I3M4G3              	81.07%
                    	       		I3N2N2              	78.70%
                    	       		I3MNB0              	65.09%
                    	       		I3NGK1              	60.36%
                    	       		I3N9E3              	48.52%
Bootstrap support for L0PGE5 as seed ortholog is 99%.
Bootstrap support for I3N6B4 as seed ortholog is 98%.

Group of orthologs #634. Best score 225 bits
Score difference with first non-orthologous sequence - P.jiroveci:225 S.tridecemlineatus:143

L0PET2              	100.00%		I3LZL3              	100.00%
L0PAE5              	86.03%		
Bootstrap support for L0PET2 as seed ortholog is 100%.
Bootstrap support for I3LZL3 as seed ortholog is 100%.

Group of orthologs #635. Best score 225 bits
Score difference with first non-orthologous sequence - P.jiroveci:225 S.tridecemlineatus:225

L0P8K8              	100.00%		I3LX08              	100.00%
Bootstrap support for L0P8K8 as seed ortholog is 100%.
Bootstrap support for I3LX08 as seed ortholog is 100%.

Group of orthologs #636. Best score 225 bits
Score difference with first non-orthologous sequence - P.jiroveci:225 S.tridecemlineatus:225

L0PBS5              	100.00%		I3MCQ1              	100.00%
Bootstrap support for L0PBS5 as seed ortholog is 100%.
Bootstrap support for I3MCQ1 as seed ortholog is 100%.

Group of orthologs #637. Best score 225 bits
Score difference with first non-orthologous sequence - P.jiroveci:225 S.tridecemlineatus:153

L0PGD9              	100.00%		I3M8T4              	100.00%
Bootstrap support for L0PGD9 as seed ortholog is 100%.
Bootstrap support for I3M8T4 as seed ortholog is 99%.

Group of orthologs #638. Best score 225 bits
Score difference with first non-orthologous sequence - P.jiroveci:225 S.tridecemlineatus:225

L0P9B6              	100.00%		I3MTJ8              	100.00%
Bootstrap support for L0P9B6 as seed ortholog is 100%.
Bootstrap support for I3MTJ8 as seed ortholog is 100%.

Group of orthologs #639. Best score 225 bits
Score difference with first non-orthologous sequence - P.jiroveci:225 S.tridecemlineatus:225

L0P901              	100.00%		I3N744              	100.00%
Bootstrap support for L0P901 as seed ortholog is 100%.
Bootstrap support for I3N744 as seed ortholog is 100%.

Group of orthologs #640. Best score 224 bits
Score difference with first non-orthologous sequence - P.jiroveci:224 S.tridecemlineatus:224

L0PA86              	100.00%		I3M624              	100.00%
                    	       		I3N4X7              	41.92%
Bootstrap support for L0PA86 as seed ortholog is 100%.
Bootstrap support for I3M624 as seed ortholog is 100%.

Group of orthologs #641. Best score 224 bits
Score difference with first non-orthologous sequence - P.jiroveci:224 S.tridecemlineatus:224

L0PBT0              	100.00%		I3LWI8              	100.00%
Bootstrap support for L0PBT0 as seed ortholog is 100%.
Bootstrap support for I3LWI8 as seed ortholog is 100%.

Group of orthologs #642. Best score 224 bits
Score difference with first non-orthologous sequence - P.jiroveci:5 S.tridecemlineatus:224

L0PD43              	100.00%		I3LYP5              	100.00%
Bootstrap support for L0PD43 as seed ortholog is 63%.
Alternative seed ortholog is L0PB48 (5 bits away from this cluster)
Bootstrap support for I3LYP5 as seed ortholog is 100%.

Group of orthologs #643. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 S.tridecemlineatus:80

L0P848              	100.00%		I3LYH3              	100.00%
L0P867              	89.62%		I3M1Q5              	21.05%
Bootstrap support for L0P848 as seed ortholog is 100%.
Bootstrap support for I3LYH3 as seed ortholog is 97%.

Group of orthologs #644. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 S.tridecemlineatus:223

L0PB03              	100.00%		I3MJ90              	100.00%
                    	       		I3MQ79              	34.16%
Bootstrap support for L0PB03 as seed ortholog is 100%.
Bootstrap support for I3MJ90 as seed ortholog is 100%.

Group of orthologs #645. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 S.tridecemlineatus:223

L0PG10              	100.00%		I3MSB6              	100.00%
                    	       		I3MY91              	16.67%
Bootstrap support for L0PG10 as seed ortholog is 100%.
Bootstrap support for I3MSB6 as seed ortholog is 100%.

Group of orthologs #646. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 S.tridecemlineatus:223

L0PA05              	100.00%		I3LW60              	100.00%
Bootstrap support for L0PA05 as seed ortholog is 100%.
Bootstrap support for I3LW60 as seed ortholog is 100%.

Group of orthologs #647. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 S.tridecemlineatus:104

L0P705              	100.00%		I3MCV8              	100.00%
Bootstrap support for L0P705 as seed ortholog is 100%.
Bootstrap support for I3MCV8 as seed ortholog is 99%.

Group of orthologs #648. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 S.tridecemlineatus:223

L0P9L7              	100.00%		I3MED8              	100.00%
Bootstrap support for L0P9L7 as seed ortholog is 100%.
Bootstrap support for I3MED8 as seed ortholog is 100%.

Group of orthologs #649. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 S.tridecemlineatus:102

L0PE21              	100.00%		I3MIU7              	100.00%
Bootstrap support for L0PE21 as seed ortholog is 100%.
Bootstrap support for I3MIU7 as seed ortholog is 99%.

Group of orthologs #650. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 S.tridecemlineatus:223

L0PCJ8              	100.00%		I3NGR3              	100.00%
Bootstrap support for L0PCJ8 as seed ortholog is 100%.
Bootstrap support for I3NGR3 as seed ortholog is 100%.

Group of orthologs #651. Best score 222 bits
Score difference with first non-orthologous sequence - P.jiroveci:222 S.tridecemlineatus:147

L0P858              	100.00%		I3NEH1              	100.00%
L0PDX5              	68.71%		
Bootstrap support for L0P858 as seed ortholog is 100%.
Bootstrap support for I3NEH1 as seed ortholog is 99%.

Group of orthologs #652. Best score 222 bits
Score difference with first non-orthologous sequence - P.jiroveci:222 S.tridecemlineatus:222

L0PG39              	100.00%		I3M9F4              	100.00%
Bootstrap support for L0PG39 as seed ortholog is 100%.
Bootstrap support for I3M9F4 as seed ortholog is 100%.

Group of orthologs #653. Best score 222 bits
Score difference with first non-orthologous sequence - P.jiroveci:222 S.tridecemlineatus:222

L0PEC6              	100.00%		I3MHJ0              	100.00%
Bootstrap support for L0PEC6 as seed ortholog is 100%.
Bootstrap support for I3MHJ0 as seed ortholog is 100%.

Group of orthologs #654. Best score 222 bits
Score difference with first non-orthologous sequence - P.jiroveci:222 S.tridecemlineatus:222

L0PFR9              	100.00%		I3N7T7              	100.00%
Bootstrap support for L0PFR9 as seed ortholog is 100%.
Bootstrap support for I3N7T7 as seed ortholog is 100%.

Group of orthologs #655. Best score 222 bits
Score difference with first non-orthologous sequence - P.jiroveci:222 S.tridecemlineatus:123

L0PE77              	100.00%		I3NDL4              	100.00%
Bootstrap support for L0PE77 as seed ortholog is 100%.
Bootstrap support for I3NDL4 as seed ortholog is 100%.

Group of orthologs #656. Best score 221 bits
Score difference with first non-orthologous sequence - P.jiroveci:16 S.tridecemlineatus:33

L0PFJ7              	100.00%		I3LYA6              	100.00%
                    	       		I3MFJ9              	29.96%
Bootstrap support for L0PFJ7 as seed ortholog is 52%.
Alternative seed ortholog is L0PBC8 (16 bits away from this cluster)
Bootstrap support for I3LYA6 as seed ortholog is 80%.

Group of orthologs #657. Best score 221 bits
Score difference with first non-orthologous sequence - P.jiroveci:221 S.tridecemlineatus:94

L0PAE8              	100.00%		I3M7V5              	100.00%
Bootstrap support for L0PAE8 as seed ortholog is 100%.
Bootstrap support for I3M7V5 as seed ortholog is 100%.

Group of orthologs #658. Best score 220 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 S.tridecemlineatus:87

L0PHW8              	100.00%		I3MPF7              	100.00%
                    	       		I3MAZ2              	80.00%
                    	       		I3LX30              	19.05%
Bootstrap support for L0PHW8 as seed ortholog is 100%.
Bootstrap support for I3MPF7 as seed ortholog is 99%.

Group of orthologs #659. Best score 220 bits
Score difference with first non-orthologous sequence - P.jiroveci:220 S.tridecemlineatus:220

L0PGY0              	100.00%		I3M5L8              	100.00%
Bootstrap support for L0PGY0 as seed ortholog is 100%.
Bootstrap support for I3M5L8 as seed ortholog is 100%.

Group of orthologs #660. Best score 220 bits
Score difference with first non-orthologous sequence - P.jiroveci:220 S.tridecemlineatus:220

L0PBK8              	100.00%		I3MKB4              	100.00%
Bootstrap support for L0PBK8 as seed ortholog is 100%.
Bootstrap support for I3MKB4 as seed ortholog is 100%.

Group of orthologs #661. Best score 219 bits
Score difference with first non-orthologous sequence - P.jiroveci:219 S.tridecemlineatus:88

L0PB86              	100.00%		I3N028              	100.00%
Bootstrap support for L0PB86 as seed ortholog is 100%.
Bootstrap support for I3N028 as seed ortholog is 99%.

Group of orthologs #662. Best score 219 bits
Score difference with first non-orthologous sequence - P.jiroveci:219 S.tridecemlineatus:219

L0PCU0              	100.00%		I3N992              	100.00%
Bootstrap support for L0PCU0 as seed ortholog is 100%.
Bootstrap support for I3N992 as seed ortholog is 100%.

Group of orthologs #663. Best score 219 bits
Score difference with first non-orthologous sequence - P.jiroveci:152 S.tridecemlineatus:110

L0PD63              	100.00%		I3NDF0              	100.00%
Bootstrap support for L0PD63 as seed ortholog is 100%.
Bootstrap support for I3NDF0 as seed ortholog is 100%.

Group of orthologs #664. Best score 219 bits
Score difference with first non-orthologous sequence - P.jiroveci:219 S.tridecemlineatus:219

L0PHL1              	100.00%		I3NDF7              	100.00%
Bootstrap support for L0PHL1 as seed ortholog is 100%.
Bootstrap support for I3NDF7 as seed ortholog is 100%.

Group of orthologs #665. Best score 218 bits
Score difference with first non-orthologous sequence - P.jiroveci:218 S.tridecemlineatus:218

L0PI61              	100.00%		I3MCN3              	100.00%
L0PA50              	19.78%		I3MDZ9              	48.78%
Bootstrap support for L0PI61 as seed ortholog is 100%.
Bootstrap support for I3MCN3 as seed ortholog is 100%.

Group of orthologs #666. Best score 218 bits
Score difference with first non-orthologous sequence - P.jiroveci:218 S.tridecemlineatus:218

L0PGE7              	100.00%		I3M735              	100.00%
Bootstrap support for L0PGE7 as seed ortholog is 100%.
Bootstrap support for I3M735 as seed ortholog is 100%.

Group of orthologs #667. Best score 218 bits
Score difference with first non-orthologous sequence - P.jiroveci:218 S.tridecemlineatus:152

L0PEW5              	100.00%		I3MGZ0              	100.00%
Bootstrap support for L0PEW5 as seed ortholog is 100%.
Bootstrap support for I3MGZ0 as seed ortholog is 99%.

Group of orthologs #668. Best score 218 bits
Score difference with first non-orthologous sequence - P.jiroveci:218 S.tridecemlineatus:218

L0P9Y7              	100.00%		I3MMW5              	100.00%
Bootstrap support for L0P9Y7 as seed ortholog is 100%.
Bootstrap support for I3MMW5 as seed ortholog is 100%.

Group of orthologs #669. Best score 218 bits
Score difference with first non-orthologous sequence - P.jiroveci:218 S.tridecemlineatus:142

L0PB84              	100.00%		I3MMK5              	100.00%
Bootstrap support for L0PB84 as seed ortholog is 100%.
Bootstrap support for I3MMK5 as seed ortholog is 100%.

Group of orthologs #670. Best score 217 bits
Score difference with first non-orthologous sequence - P.jiroveci:217 S.tridecemlineatus:109

L0PFZ1              	100.00%		I3M1K7              	100.00%
                    	       		I3MMC2              	46.47%
                    	       		I3MTA0              	18.08%
Bootstrap support for L0PFZ1 as seed ortholog is 100%.
Bootstrap support for I3M1K7 as seed ortholog is 99%.

Group of orthologs #671. Best score 217 bits
Score difference with first non-orthologous sequence - P.jiroveci:217 S.tridecemlineatus:217

L0PGT2              	100.00%		I3M0V8              	100.00%
Bootstrap support for L0PGT2 as seed ortholog is 100%.
Bootstrap support for I3M0V8 as seed ortholog is 100%.

Group of orthologs #672. Best score 217 bits
Score difference with first non-orthologous sequence - P.jiroveci:217 S.tridecemlineatus:217

L0PDX6              	100.00%		I3M6R7              	100.00%
Bootstrap support for L0PDX6 as seed ortholog is 100%.
Bootstrap support for I3M6R7 as seed ortholog is 100%.

Group of orthologs #673. Best score 217 bits
Score difference with first non-orthologous sequence - P.jiroveci:217 S.tridecemlineatus:217

L0PGJ8              	100.00%		I3N443              	100.00%
Bootstrap support for L0PGJ8 as seed ortholog is 100%.
Bootstrap support for I3N443 as seed ortholog is 100%.

Group of orthologs #674. Best score 216 bits
Score difference with first non-orthologous sequence - P.jiroveci:158 S.tridecemlineatus:138

L0PAW4              	100.00%		I3MUS8              	100.00%
                    	       		I3N185              	100.00%
Bootstrap support for L0PAW4 as seed ortholog is 100%.
Bootstrap support for I3MUS8 as seed ortholog is 99%.
Bootstrap support for I3N185 as seed ortholog is 99%.

Group of orthologs #675. Best score 216 bits
Score difference with first non-orthologous sequence - P.jiroveci:216 S.tridecemlineatus:216

L0PDL5              	100.00%		I3N763              	100.00%
                    	       		I3M8W7              	76.25%
Bootstrap support for L0PDL5 as seed ortholog is 100%.
Bootstrap support for I3N763 as seed ortholog is 100%.

Group of orthologs #676. Best score 216 bits
Score difference with first non-orthologous sequence - P.jiroveci:216 S.tridecemlineatus:216

L0PDR1              	100.00%		I3LZQ6              	100.00%
Bootstrap support for L0PDR1 as seed ortholog is 100%.
Bootstrap support for I3LZQ6 as seed ortholog is 100%.

Group of orthologs #677. Best score 216 bits
Score difference with first non-orthologous sequence - P.jiroveci:216 S.tridecemlineatus:137

L0PFL8              	100.00%		I3MUB2              	100.00%
Bootstrap support for L0PFL8 as seed ortholog is 100%.
Bootstrap support for I3MUB2 as seed ortholog is 100%.

Group of orthologs #678. Best score 215 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 S.tridecemlineatus:112

L0PDS3              	100.00%		I3NH99              	100.00%
                    	       		I3N6S1              	41.38%
                    	       		I3N5L4              	32.27%
Bootstrap support for L0PDS3 as seed ortholog is 98%.
Bootstrap support for I3NH99 as seed ortholog is 99%.

Group of orthologs #679. Best score 215 bits
Score difference with first non-orthologous sequence - P.jiroveci:215 S.tridecemlineatus:58

L0PDB8              	100.00%		I3LW00              	100.00%
Bootstrap support for L0PDB8 as seed ortholog is 100%.
Bootstrap support for I3LW00 as seed ortholog is 96%.

Group of orthologs #680. Best score 215 bits
Score difference with first non-orthologous sequence - P.jiroveci:137 S.tridecemlineatus:121

L0P863              	100.00%		I3MMA1              	100.00%
Bootstrap support for L0P863 as seed ortholog is 99%.
Bootstrap support for I3MMA1 as seed ortholog is 99%.

Group of orthologs #681. Best score 215 bits
Score difference with first non-orthologous sequence - P.jiroveci:215 S.tridecemlineatus:215

L0PAL5              	100.00%		I3MLW5              	100.00%
Bootstrap support for L0PAL5 as seed ortholog is 100%.
Bootstrap support for I3MLW5 as seed ortholog is 100%.

Group of orthologs #682. Best score 215 bits
Score difference with first non-orthologous sequence - P.jiroveci:215 S.tridecemlineatus:144

L0PFU0              	100.00%		I3MLQ6              	100.00%
Bootstrap support for L0PFU0 as seed ortholog is 100%.
Bootstrap support for I3MLQ6 as seed ortholog is 99%.

Group of orthologs #683. Best score 214 bits
Score difference with first non-orthologous sequence - P.jiroveci:214 S.tridecemlineatus:214

L0PD65              	100.00%		I3N6Z6              	100.00%
                    	       		I3MB27              	52.04%
Bootstrap support for L0PD65 as seed ortholog is 100%.
Bootstrap support for I3N6Z6 as seed ortholog is 100%.

Group of orthologs #684. Best score 213 bits
Score difference with first non-orthologous sequence - P.jiroveci:213 S.tridecemlineatus:213

L0PFS1              	100.00%		I3M414              	100.00%
Bootstrap support for L0PFS1 as seed ortholog is 100%.
Bootstrap support for I3M414 as seed ortholog is 100%.

Group of orthologs #685. Best score 213 bits
Score difference with first non-orthologous sequence - P.jiroveci:213 S.tridecemlineatus:213

L0P8R5              	100.00%		I3MCP5              	100.00%
Bootstrap support for L0P8R5 as seed ortholog is 100%.
Bootstrap support for I3MCP5 as seed ortholog is 100%.

Group of orthologs #686. Best score 213 bits
Score difference with first non-orthologous sequence - P.jiroveci:213 S.tridecemlineatus:213

L0P9U1              	100.00%		I3MP33              	100.00%
Bootstrap support for L0P9U1 as seed ortholog is 100%.
Bootstrap support for I3MP33 as seed ortholog is 100%.

Group of orthologs #687. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:212 S.tridecemlineatus:212

L0P910              	100.00%		I3N1R1              	100.00%
                    	       		I3N498              	98.47%
                    	       		I3MEQ6              	26.05%
Bootstrap support for L0P910 as seed ortholog is 100%.
Bootstrap support for I3N1R1 as seed ortholog is 100%.

Group of orthologs #688. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:212 S.tridecemlineatus:93

L0PG76              	100.00%		I3MJW0              	100.00%
L0PE70              	51.52%		
Bootstrap support for L0PG76 as seed ortholog is 100%.
Bootstrap support for I3MJW0 as seed ortholog is 99%.

Group of orthologs #689. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:212 S.tridecemlineatus:212

L0PEL2              	100.00%		I3M7X4              	100.00%
Bootstrap support for L0PEL2 as seed ortholog is 100%.
Bootstrap support for I3M7X4 as seed ortholog is 100%.

Group of orthologs #690. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:212 S.tridecemlineatus:212

L0PCB3              	100.00%		I3MBZ5              	100.00%
Bootstrap support for L0PCB3 as seed ortholog is 100%.
Bootstrap support for I3MBZ5 as seed ortholog is 100%.

Group of orthologs #691. Best score 211 bits
Score difference with first non-orthologous sequence - P.jiroveci:121 S.tridecemlineatus:82

L0PCY2              	100.00%		I3M2X6              	100.00%
                    	       		I3N6M9              	7.56%
Bootstrap support for L0PCY2 as seed ortholog is 99%.
Bootstrap support for I3M2X6 as seed ortholog is 94%.

Group of orthologs #692. Best score 211 bits
Score difference with first non-orthologous sequence - P.jiroveci:211 S.tridecemlineatus:211

L0PC53              	100.00%		I3M7N6              	100.00%
Bootstrap support for L0PC53 as seed ortholog is 100%.
Bootstrap support for I3M7N6 as seed ortholog is 100%.

Group of orthologs #693. Best score 210 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 S.tridecemlineatus:87

L0PFN2              	100.00%		I3MMR5              	100.00%
                    	       		I3NFJ8              	100.00%
                    	       		I3MB47              	67.82%
Bootstrap support for L0PFN2 as seed ortholog is 100%.
Bootstrap support for I3MMR5 as seed ortholog is 100%.
Bootstrap support for I3NFJ8 as seed ortholog is 100%.

Group of orthologs #694. Best score 210 bits
Score difference with first non-orthologous sequence - P.jiroveci:156 S.tridecemlineatus:68

L0P8M4              	100.00%		I3ND19              	100.00%
                    	       		I3N158              	76.50%
                    	       		I3N9T1              	19.82%
Bootstrap support for L0P8M4 as seed ortholog is 100%.
Bootstrap support for I3ND19 as seed ortholog is 98%.

Group of orthologs #695. Best score 210 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 S.tridecemlineatus:72

L0PFI0              	100.00%		I3MEC6              	100.00%
                    	       		I3LZT8              	38.52%
Bootstrap support for L0PFI0 as seed ortholog is 99%.
Bootstrap support for I3MEC6 as seed ortholog is 94%.

Group of orthologs #696. Best score 210 bits
Score difference with first non-orthologous sequence - P.jiroveci:210 S.tridecemlineatus:210

L0PH67              	100.00%		I3MNM6              	100.00%
L0P9J6              	95.08%		
Bootstrap support for L0PH67 as seed ortholog is 100%.
Bootstrap support for I3MNM6 as seed ortholog is 100%.

Group of orthologs #697. Best score 210 bits
Score difference with first non-orthologous sequence - P.jiroveci:137 S.tridecemlineatus:138

L0PDB2              	100.00%		I3LYU5              	100.00%
Bootstrap support for L0PDB2 as seed ortholog is 99%.
Bootstrap support for I3LYU5 as seed ortholog is 99%.

Group of orthologs #698. Best score 210 bits
Score difference with first non-orthologous sequence - P.jiroveci:210 S.tridecemlineatus:210

L0PBV6              	100.00%		I3MHZ0              	100.00%
Bootstrap support for L0PBV6 as seed ortholog is 100%.
Bootstrap support for I3MHZ0 as seed ortholog is 100%.

Group of orthologs #699. Best score 210 bits
Score difference with first non-orthologous sequence - P.jiroveci:210 S.tridecemlineatus:79

L0PGL3              	100.00%		I3MEZ3              	100.00%
Bootstrap support for L0PGL3 as seed ortholog is 100%.
Bootstrap support for I3MEZ3 as seed ortholog is 95%.

Group of orthologs #700. Best score 208 bits
Score difference with first non-orthologous sequence - P.jiroveci:208 S.tridecemlineatus:208

L0PFP0              	100.00%		M3ZCQ7              	100.00%
                    	       		I3M6S5              	81.58%
                    	       		I3M3X2              	80.66%
                    	       		I3MJQ2              	39.04%
                    	       		I3M8G6              	31.68%
Bootstrap support for L0PFP0 as seed ortholog is 100%.
Bootstrap support for M3ZCQ7 as seed ortholog is 100%.

Group of orthologs #701. Best score 208 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 S.tridecemlineatus:208

L0PFD8              	100.00%		I3M2D4              	100.00%
                    	       		I3MLL0              	24.40%
                    	       		I3N333              	16.03%
Bootstrap support for L0PFD8 as seed ortholog is 99%.
Bootstrap support for I3M2D4 as seed ortholog is 100%.

Group of orthologs #702. Best score 208 bits
Score difference with first non-orthologous sequence - P.jiroveci:208 S.tridecemlineatus:208

L0PCF4              	100.00%		I3MHR5              	100.00%
L0P926              	60.99%		
Bootstrap support for L0PCF4 as seed ortholog is 100%.
Bootstrap support for I3MHR5 as seed ortholog is 100%.

Group of orthologs #703. Best score 208 bits
Score difference with first non-orthologous sequence - P.jiroveci:138 S.tridecemlineatus:123

L0PAZ8              	100.00%		I3M8Q0              	100.00%
Bootstrap support for L0PAZ8 as seed ortholog is 99%.
Bootstrap support for I3M8Q0 as seed ortholog is 99%.

Group of orthologs #704. Best score 208 bits
Score difference with first non-orthologous sequence - P.jiroveci:208 S.tridecemlineatus:146

L0P8X1              	100.00%		I3MLF2              	100.00%
Bootstrap support for L0P8X1 as seed ortholog is 100%.
Bootstrap support for I3MLF2 as seed ortholog is 99%.

Group of orthologs #705. Best score 207 bits
Score difference with first non-orthologous sequence - P.jiroveci:207 S.tridecemlineatus:207

L0PFV3              	100.00%		I3M2S4              	100.00%
Bootstrap support for L0PFV3 as seed ortholog is 100%.
Bootstrap support for I3M2S4 as seed ortholog is 100%.

Group of orthologs #706. Best score 207 bits
Score difference with first non-orthologous sequence - P.jiroveci:207 S.tridecemlineatus:110

L0PEQ4              	100.00%		I3MP87              	100.00%
Bootstrap support for L0PEQ4 as seed ortholog is 100%.
Bootstrap support for I3MP87 as seed ortholog is 99%.

Group of orthologs #707. Best score 207 bits
Score difference with first non-orthologous sequence - P.jiroveci:207 S.tridecemlineatus:85

L0PB66              	100.00%		I3N503              	100.00%
Bootstrap support for L0PB66 as seed ortholog is 100%.
Bootstrap support for I3N503 as seed ortholog is 100%.

Group of orthologs #708. Best score 206 bits
Score difference with first non-orthologous sequence - P.jiroveci:206 S.tridecemlineatus:206

L0PB11              	100.00%		I3MK62              	100.00%
Bootstrap support for L0PB11 as seed ortholog is 100%.
Bootstrap support for I3MK62 as seed ortholog is 100%.

Group of orthologs #709. Best score 205 bits
Score difference with first non-orthologous sequence - P.jiroveci:205 S.tridecemlineatus:138

L0P839              	100.00%		I3MNQ9              	100.00%
                    	       		I3M2B9              	20.14%
Bootstrap support for L0P839 as seed ortholog is 100%.
Bootstrap support for I3MNQ9 as seed ortholog is 100%.

Group of orthologs #710. Best score 205 bits
Score difference with first non-orthologous sequence - P.jiroveci:205 S.tridecemlineatus:205

L0PAR5              	100.00%		I3MBT1              	100.00%
Bootstrap support for L0PAR5 as seed ortholog is 100%.
Bootstrap support for I3MBT1 as seed ortholog is 100%.

Group of orthologs #711. Best score 204 bits
Score difference with first non-orthologous sequence - P.jiroveci:5 S.tridecemlineatus:24

L0PCN5              	100.00%		I3MB26              	100.00%
L0P7B6              	92.67%		I3MRR4              	100.00%
                    	       		I3LZS2              	54.00%
                    	       		I3MAV8              	15.61%
                    	       		I3M4D4              	15.40%
                    	       		I3LZK3              	11.50%
                    	       		I3MNN1              	8.42%
                    	       		I3MCL2              	5.34%
Bootstrap support for L0PCN5 as seed ortholog is 53%.
Alternative seed ortholog is L0PGT4 (5 bits away from this cluster)
Bootstrap support for I3MB26 as seed ortholog is 72%.
Alternative seed ortholog is I3NDL9 (24 bits away from this cluster)
Bootstrap support for I3MRR4 as seed ortholog is 71%.
Alternative seed ortholog is I3NDL9 (24 bits away from this cluster)

Group of orthologs #712. Best score 204 bits
Score difference with first non-orthologous sequence - P.jiroveci:204 S.tridecemlineatus:123

L0PBN7              	100.00%		I3MF59              	100.00%
Bootstrap support for L0PBN7 as seed ortholog is 100%.
Bootstrap support for I3MF59 as seed ortholog is 100%.

Group of orthologs #713. Best score 204 bits
Score difference with first non-orthologous sequence - P.jiroveci:204 S.tridecemlineatus:204

L0PC18              	100.00%		I3MGP9              	100.00%
Bootstrap support for L0PC18 as seed ortholog is 100%.
Bootstrap support for I3MGP9 as seed ortholog is 100%.

Group of orthologs #714. Best score 203 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 S.tridecemlineatus:96

L0P7B1              	100.00%		I3MAG4              	100.00%
                    	       		I3MHL8              	89.19%
Bootstrap support for L0P7B1 as seed ortholog is 99%.
Bootstrap support for I3MAG4 as seed ortholog is 100%.

Group of orthologs #715. Best score 203 bits
Score difference with first non-orthologous sequence - P.jiroveci:203 S.tridecemlineatus:203

L0PCK3              	100.00%		I3NGC9              	100.00%
                    	       		I3M4N9              	32.74%
Bootstrap support for L0PCK3 as seed ortholog is 100%.
Bootstrap support for I3NGC9 as seed ortholog is 100%.

Group of orthologs #716. Best score 203 bits
Score difference with first non-orthologous sequence - P.jiroveci:203 S.tridecemlineatus:203

L0PCH6              	100.00%		I3M2U4              	100.00%
Bootstrap support for L0PCH6 as seed ortholog is 100%.
Bootstrap support for I3M2U4 as seed ortholog is 100%.

Group of orthologs #717. Best score 203 bits
Score difference with first non-orthologous sequence - P.jiroveci:203 S.tridecemlineatus:203

L0PBD4              	100.00%		I3M5X4              	100.00%
Bootstrap support for L0PBD4 as seed ortholog is 100%.
Bootstrap support for I3M5X4 as seed ortholog is 100%.

Group of orthologs #718. Best score 203 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 S.tridecemlineatus:95

L0P9Z5              	100.00%		I3MIL7              	100.00%
Bootstrap support for L0P9Z5 as seed ortholog is 99%.
Bootstrap support for I3MIL7 as seed ortholog is 97%.

Group of orthologs #719. Best score 203 bits
Score difference with first non-orthologous sequence - P.jiroveci:203 S.tridecemlineatus:77

L0PAA8              	100.00%		I3N787              	100.00%
Bootstrap support for L0PAA8 as seed ortholog is 100%.
Bootstrap support for I3N787 as seed ortholog is 99%.

Group of orthologs #720. Best score 202 bits
Score difference with first non-orthologous sequence - P.jiroveci:202 S.tridecemlineatus:202

L0P8J0              	100.00%		I3MK68              	100.00%
Bootstrap support for L0P8J0 as seed ortholog is 100%.
Bootstrap support for I3MK68 as seed ortholog is 100%.

Group of orthologs #721. Best score 201 bits
Score difference with first non-orthologous sequence - P.jiroveci:201 S.tridecemlineatus:101

L0PF71              	100.00%		I3LVU8              	100.00%
Bootstrap support for L0PF71 as seed ortholog is 100%.
Bootstrap support for I3LVU8 as seed ortholog is 99%.

Group of orthologs #722. Best score 201 bits
Score difference with first non-orthologous sequence - P.jiroveci:80 S.tridecemlineatus:72

L0PG51              	100.00%		I3LWN8              	100.00%
Bootstrap support for L0PG51 as seed ortholog is 96%.
Bootstrap support for I3LWN8 as seed ortholog is 95%.

Group of orthologs #723. Best score 201 bits
Score difference with first non-orthologous sequence - P.jiroveci:201 S.tridecemlineatus:102

L0PF53              	100.00%		I3MND5              	100.00%
Bootstrap support for L0PF53 as seed ortholog is 100%.
Bootstrap support for I3MND5 as seed ortholog is 99%.

Group of orthologs #724. Best score 201 bits
Score difference with first non-orthologous sequence - P.jiroveci:201 S.tridecemlineatus:201

L0PD35              	100.00%		I3N1Y5              	100.00%
Bootstrap support for L0PD35 as seed ortholog is 100%.
Bootstrap support for I3N1Y5 as seed ortholog is 100%.

Group of orthologs #725. Best score 200 bits
Score difference with first non-orthologous sequence - P.jiroveci:200 S.tridecemlineatus:200

L0PDJ6              	100.00%		I3LX62              	100.00%
                    	       		I3NDS2              	23.05%
                    	       		I3N6X1              	15.43%
Bootstrap support for L0PDJ6 as seed ortholog is 100%.
Bootstrap support for I3LX62 as seed ortholog is 100%.

Group of orthologs #726. Best score 200 bits
Score difference with first non-orthologous sequence - P.jiroveci:200 S.tridecemlineatus:200

L0PAM3              	100.00%		I3M5B0              	100.00%
Bootstrap support for L0PAM3 as seed ortholog is 100%.
Bootstrap support for I3M5B0 as seed ortholog is 100%.

Group of orthologs #727. Best score 199 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 S.tridecemlineatus:84

L0PAF0              	100.00%		I3M3Y8              	100.00%
                    	       		I3M3R6              	9.98%
Bootstrap support for L0PAF0 as seed ortholog is 99%.
Bootstrap support for I3M3Y8 as seed ortholog is 97%.

Group of orthologs #728. Best score 199 bits
Score difference with first non-orthologous sequence - P.jiroveci:199 S.tridecemlineatus:199

L0PCV5              	100.00%		I3M3T6              	100.00%
Bootstrap support for L0PCV5 as seed ortholog is 100%.
Bootstrap support for I3M3T6 as seed ortholog is 100%.

Group of orthologs #729. Best score 199 bits
Score difference with first non-orthologous sequence - P.jiroveci:199 S.tridecemlineatus:199

L0PAC1              	100.00%		I3MAE6              	100.00%
Bootstrap support for L0PAC1 as seed ortholog is 100%.
Bootstrap support for I3MAE6 as seed ortholog is 100%.

Group of orthologs #730. Best score 198 bits
Score difference with first non-orthologous sequence - P.jiroveci:198 S.tridecemlineatus:34

L0PC02              	100.00%		I3NCI7              	100.00%
                    	       		I3LX03              	42.84%
                    	       		I3NEK5              	19.11%
Bootstrap support for L0PC02 as seed ortholog is 100%.
Bootstrap support for I3NCI7 as seed ortholog is 76%.

Group of orthologs #731. Best score 198 bits
Score difference with first non-orthologous sequence - P.jiroveci:198 S.tridecemlineatus:84

L0P9I0              	100.00%		I3MT23              	100.00%
Bootstrap support for L0P9I0 as seed ortholog is 100%.
Bootstrap support for I3MT23 as seed ortholog is 99%.

Group of orthologs #732. Best score 197 bits
Score difference with first non-orthologous sequence - P.jiroveci:197 S.tridecemlineatus:197

L0PBE8              	100.00%		I3MF97              	100.00%
                    	       		I3NE28              	58.68%
Bootstrap support for L0PBE8 as seed ortholog is 100%.
Bootstrap support for I3MF97 as seed ortholog is 100%.

Group of orthologs #733. Best score 197 bits
Score difference with first non-orthologous sequence - P.jiroveci:197 S.tridecemlineatus:95

L0PA51              	100.00%		I3NF88              	100.00%
                    	       		I3NBU5              	49.33%
Bootstrap support for L0PA51 as seed ortholog is 100%.
Bootstrap support for I3NF88 as seed ortholog is 99%.

Group of orthologs #734. Best score 196 bits
Score difference with first non-orthologous sequence - P.jiroveci:196 S.tridecemlineatus:196

L0PCK9              	100.00%		I3LZW2              	100.00%
Bootstrap support for L0PCK9 as seed ortholog is 100%.
Bootstrap support for I3LZW2 as seed ortholog is 100%.

Group of orthologs #735. Best score 195 bits
Score difference with first non-orthologous sequence - P.jiroveci:195 S.tridecemlineatus:195

L0P9Z4              	100.00%		I3MQI2              	100.00%
                    	       		I3NF77              	83.50%
                    	       		I3M109              	48.25%
Bootstrap support for L0P9Z4 as seed ortholog is 100%.
Bootstrap support for I3MQI2 as seed ortholog is 100%.

Group of orthologs #736. Best score 195 bits
Score difference with first non-orthologous sequence - P.jiroveci:195 S.tridecemlineatus:98

L0PE03              	100.00%		I3M5E7              	100.00%
Bootstrap support for L0PE03 as seed ortholog is 100%.
Bootstrap support for I3M5E7 as seed ortholog is 99%.

Group of orthologs #737. Best score 195 bits
Score difference with first non-orthologous sequence - P.jiroveci:195 S.tridecemlineatus:124

L0PF75              	100.00%		I3NGQ1              	100.00%
Bootstrap support for L0PF75 as seed ortholog is 100%.
Bootstrap support for I3NGQ1 as seed ortholog is 99%.

Group of orthologs #738. Best score 194 bits
Score difference with first non-orthologous sequence - P.jiroveci:194 S.tridecemlineatus:194

L0PHT7              	100.00%		I3M0M3              	100.00%
                    	       		I3LWB3              	29.57%
                    	       		I3N8C0              	15.82%
Bootstrap support for L0PHT7 as seed ortholog is 100%.
Bootstrap support for I3M0M3 as seed ortholog is 100%.

Group of orthologs #739. Best score 194 bits
Score difference with first non-orthologous sequence - P.jiroveci:194 S.tridecemlineatus:140

L0PAJ6              	100.00%		I3N9X7              	100.00%
Bootstrap support for L0PAJ6 as seed ortholog is 100%.
Bootstrap support for I3N9X7 as seed ortholog is 100%.

Group of orthologs #740. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 S.tridecemlineatus:33

L0PAY4              	100.00%		I3M9B7              	100.00%
                    	       		I3MT31              	100.00%
                    	       		I3MWL4              	100.00%
                    	       		I3MY65              	100.00%
                    	       		I3NAV2              	100.00%
                    	       		I3N7H2              	96.77%
                    	       		I3N1G0              	83.87%
                    	       		I3MYV5              	79.31%
                    	       		I3MSU5              	74.14%
                    	       		I3MGW7              	74.14%
                    	       		I3MJV5              	72.41%
                    	       		I3MMW9              	60.34%
Bootstrap support for L0PAY4 as seed ortholog is 100%.
Bootstrap support for I3M9B7 as seed ortholog is 96%.
Bootstrap support for I3MT31 as seed ortholog is 95%.
Bootstrap support for I3MWL4 as seed ortholog is 95%.
Bootstrap support for I3MY65 as seed ortholog is 95%.
Bootstrap support for I3NAV2 as seed ortholog is 95%.

Group of orthologs #741. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:140 S.tridecemlineatus:43

L0PIS9              	100.00%		I3NBC7              	100.00%
                    	       		I3MQU0              	71.95%
                    	       		I3MXE6              	38.46%
                    	       		I3MGW9              	33.94%
                    	       		I3MU67              	15.84%
                    	       		I3MGK9              	10.86%
                    	       		I3LXH2              	8.60%
                    	       		I3M1G6              	8.14%
                    	       		I3M5A2              	6.33%
                    	       		I3NH34              	5.88%
Bootstrap support for L0PIS9 as seed ortholog is 99%.
Bootstrap support for I3NBC7 as seed ortholog is 92%.

Group of orthologs #742. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:193 S.tridecemlineatus:193

L0PGJ6              	100.00%		I3LZ23              	100.00%
                    	       		I3LZB9              	16.54%
Bootstrap support for L0PGJ6 as seed ortholog is 100%.
Bootstrap support for I3LZ23 as seed ortholog is 100%.

Group of orthologs #743. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:193 S.tridecemlineatus:193

L0PA42              	100.00%		I3MXY7              	100.00%
                    	       		I3NA96              	25.33%
Bootstrap support for L0PA42 as seed ortholog is 100%.
Bootstrap support for I3MXY7 as seed ortholog is 100%.

Group of orthologs #744. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:193 S.tridecemlineatus:139

L0P919              	100.00%		I3NDI5              	100.00%
                    	       		I3N797              	42.86%
Bootstrap support for L0P919 as seed ortholog is 100%.
Bootstrap support for I3NDI5 as seed ortholog is 100%.

Group of orthologs #745. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:193 S.tridecemlineatus:193

L0PFH3              	100.00%		I3MV41              	100.00%
Bootstrap support for L0PFH3 as seed ortholog is 100%.
Bootstrap support for I3MV41 as seed ortholog is 100%.

Group of orthologs #746. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:193 S.tridecemlineatus:78

L0PBZ6              	100.00%		I3N2P9              	100.00%
Bootstrap support for L0PBZ6 as seed ortholog is 100%.
Bootstrap support for I3N2P9 as seed ortholog is 99%.

Group of orthologs #747. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 S.tridecemlineatus:53

L0PGT3              	100.00%		I3N6L1              	100.00%
Bootstrap support for L0PGT3 as seed ortholog is 100%.
Bootstrap support for I3N6L1 as seed ortholog is 99%.

Group of orthologs #748. Best score 192 bits
Score difference with first non-orthologous sequence - P.jiroveci:192 S.tridecemlineatus:192

L0PBL3              	100.00%		I3NFT4              	100.00%
                    	       		I3MNC0              	55.31%
                    	       		I3M897              	44.89%
Bootstrap support for L0PBL3 as seed ortholog is 100%.
Bootstrap support for I3NFT4 as seed ortholog is 100%.

Group of orthologs #749. Best score 192 bits
Score difference with first non-orthologous sequence - P.jiroveci:192 S.tridecemlineatus:61

L0PEJ9              	100.00%		I3MAP0              	100.00%
Bootstrap support for L0PEJ9 as seed ortholog is 100%.
Bootstrap support for I3MAP0 as seed ortholog is 91%.

Group of orthologs #750. Best score 192 bits
Score difference with first non-orthologous sequence - P.jiroveci:192 S.tridecemlineatus:192

L0P7I8              	100.00%		I3MKR8              	100.00%
Bootstrap support for L0P7I8 as seed ortholog is 100%.
Bootstrap support for I3MKR8 as seed ortholog is 100%.

Group of orthologs #751. Best score 192 bits
Score difference with first non-orthologous sequence - P.jiroveci:192 S.tridecemlineatus:64

L0PFQ4              	100.00%		I3MZ16              	100.00%
Bootstrap support for L0PFQ4 as seed ortholog is 100%.
Bootstrap support for I3MZ16 as seed ortholog is 99%.

Group of orthologs #752. Best score 191 bits
Score difference with first non-orthologous sequence - P.jiroveci:191 S.tridecemlineatus:191

L0PGX9              	100.00%		I3MKT0              	100.00%
                    	       		I3N1R8              	56.68%
Bootstrap support for L0PGX9 as seed ortholog is 100%.
Bootstrap support for I3MKT0 as seed ortholog is 100%.

Group of orthologs #753. Best score 191 bits
Score difference with first non-orthologous sequence - P.jiroveci:191 S.tridecemlineatus:191

L0P6S2              	100.00%		I3LX22              	100.00%
Bootstrap support for L0P6S2 as seed ortholog is 100%.
Bootstrap support for I3LX22 as seed ortholog is 100%.

Group of orthologs #754. Best score 191 bits
Score difference with first non-orthologous sequence - P.jiroveci:191 S.tridecemlineatus:191

L0PF44              	100.00%		I3MXV0              	100.00%
Bootstrap support for L0PF44 as seed ortholog is 100%.
Bootstrap support for I3MXV0 as seed ortholog is 100%.

Group of orthologs #755. Best score 190 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 S.tridecemlineatus:68

L0PCC3              	100.00%		I3MFP2              	100.00%
                    	       		I3NG05              	72.27%
                    	       		I3M882              	65.97%
Bootstrap support for L0PCC3 as seed ortholog is 100%.
Bootstrap support for I3MFP2 as seed ortholog is 99%.

Group of orthologs #756. Best score 190 bits
Score difference with first non-orthologous sequence - P.jiroveci:190 S.tridecemlineatus:190

L0PH55              	100.00%		I3MAR0              	100.00%
Bootstrap support for L0PH55 as seed ortholog is 100%.
Bootstrap support for I3MAR0 as seed ortholog is 100%.

Group of orthologs #757. Best score 190 bits
Score difference with first non-orthologous sequence - P.jiroveci:190 S.tridecemlineatus:190

L0PE85              	100.00%		I3NC99              	100.00%
Bootstrap support for L0PE85 as seed ortholog is 100%.
Bootstrap support for I3NC99 as seed ortholog is 100%.

Group of orthologs #758. Best score 189 bits
Score difference with first non-orthologous sequence - P.jiroveci:189 S.tridecemlineatus:189

L0PFC3              	100.00%		I3M7E5              	100.00%
Bootstrap support for L0PFC3 as seed ortholog is 100%.
Bootstrap support for I3M7E5 as seed ortholog is 100%.

Group of orthologs #759. Best score 189 bits
Score difference with first non-orthologous sequence - P.jiroveci:189 S.tridecemlineatus:189

L0PE05              	100.00%		I3MT81              	100.00%
Bootstrap support for L0PE05 as seed ortholog is 100%.
Bootstrap support for I3MT81 as seed ortholog is 100%.

Group of orthologs #760. Best score 189 bits
Score difference with first non-orthologous sequence - P.jiroveci:189 S.tridecemlineatus:189

L0PG84              	100.00%		I3NGF0              	100.00%
Bootstrap support for L0PG84 as seed ortholog is 100%.
Bootstrap support for I3NGF0 as seed ortholog is 100%.

Group of orthologs #761. Best score 189 bits
Score difference with first non-orthologous sequence - P.jiroveci:189 S.tridecemlineatus:189

L0PFN0              	100.00%		I3NH31              	100.00%
Bootstrap support for L0PFN0 as seed ortholog is 100%.
Bootstrap support for I3NH31 as seed ortholog is 100%.

Group of orthologs #762. Best score 188 bits
Score difference with first non-orthologous sequence - P.jiroveci:188 S.tridecemlineatus:188

L0PC80              	100.00%		I3LWN0              	100.00%
Bootstrap support for L0PC80 as seed ortholog is 100%.
Bootstrap support for I3LWN0 as seed ortholog is 100%.

Group of orthologs #763. Best score 188 bits
Score difference with first non-orthologous sequence - P.jiroveci:188 S.tridecemlineatus:188

L0PD76              	100.00%		I3M9T5              	100.00%
Bootstrap support for L0PD76 as seed ortholog is 100%.
Bootstrap support for I3M9T5 as seed ortholog is 100%.

Group of orthologs #764. Best score 188 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 S.tridecemlineatus:119

L0PEH9              	100.00%		I3MAT3              	100.00%
Bootstrap support for L0PEH9 as seed ortholog is 99%.
Bootstrap support for I3MAT3 as seed ortholog is 99%.

Group of orthologs #765. Best score 186 bits
Score difference with first non-orthologous sequence - P.jiroveci:186 S.tridecemlineatus:120

L0P838              	100.00%		I3MCY4              	100.00%
                    	       		I3M3R1              	22.94%
Bootstrap support for L0P838 as seed ortholog is 100%.
Bootstrap support for I3MCY4 as seed ortholog is 99%.

Group of orthologs #766. Best score 185 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 S.tridecemlineatus:121

L0PD33              	100.00%		I3M5W7              	100.00%
                    	       		I3M7T1              	39.07%
Bootstrap support for L0PD33 as seed ortholog is 100%.
Bootstrap support for I3M5W7 as seed ortholog is 99%.

Group of orthologs #767. Best score 185 bits
Score difference with first non-orthologous sequence - P.jiroveci:185 S.tridecemlineatus:87

L0PDE4              	100.00%		I3MJ44              	100.00%
                    	       		I3MXM7              	69.09%
Bootstrap support for L0PDE4 as seed ortholog is 100%.
Bootstrap support for I3MJ44 as seed ortholog is 99%.

Group of orthologs #768. Best score 185 bits
Score difference with first non-orthologous sequence - P.jiroveci:185 S.tridecemlineatus:107

L0PFZ6              	100.00%		I3N5B7              	100.00%
L0P7L2              	96.02%		
Bootstrap support for L0PFZ6 as seed ortholog is 100%.
Bootstrap support for I3N5B7 as seed ortholog is 99%.

Group of orthologs #769. Best score 185 bits
Score difference with first non-orthologous sequence - P.jiroveci:185 S.tridecemlineatus:185

L0PEA1              	100.00%		I3MD29              	100.00%
Bootstrap support for L0PEA1 as seed ortholog is 100%.
Bootstrap support for I3MD29 as seed ortholog is 100%.

Group of orthologs #770. Best score 185 bits
Score difference with first non-orthologous sequence - P.jiroveci:185 S.tridecemlineatus:52

L0PBS7              	100.00%		I3MLT8              	100.00%
Bootstrap support for L0PBS7 as seed ortholog is 100%.
Bootstrap support for I3MLT8 as seed ortholog is 90%.

Group of orthologs #771. Best score 184 bits
Score difference with first non-orthologous sequence - P.jiroveci:184 S.tridecemlineatus:184

L0PBB0              	100.00%		I3LWG6              	100.00%
                    	       		I3N979              	12.16%
Bootstrap support for L0PBB0 as seed ortholog is 100%.
Bootstrap support for I3LWG6 as seed ortholog is 100%.

Group of orthologs #772. Best score 184 bits
Score difference with first non-orthologous sequence - P.jiroveci:184 S.tridecemlineatus:95

L0PA07              	100.00%		I3M218              	100.00%
Bootstrap support for L0PA07 as seed ortholog is 100%.
Bootstrap support for I3M218 as seed ortholog is 99%.

Group of orthologs #773. Best score 184 bits
Score difference with first non-orthologous sequence - P.jiroveci:184 S.tridecemlineatus:184

L0PC96              	100.00%		I3MIA6              	100.00%
Bootstrap support for L0PC96 as seed ortholog is 100%.
Bootstrap support for I3MIA6 as seed ortholog is 100%.

Group of orthologs #774. Best score 183 bits
Score difference with first non-orthologous sequence - P.jiroveci:183 S.tridecemlineatus:183

L0P746              	100.00%		I3M7T2              	100.00%
Bootstrap support for L0P746 as seed ortholog is 100%.
Bootstrap support for I3M7T2 as seed ortholog is 100%.

Group of orthologs #775. Best score 182 bits
Score difference with first non-orthologous sequence - P.jiroveci:182 S.tridecemlineatus:182

L0P957              	100.00%		I3M7G4              	100.00%
                    	       		I3MK35              	15.17%
Bootstrap support for L0P957 as seed ortholog is 100%.
Bootstrap support for I3M7G4 as seed ortholog is 100%.

Group of orthologs #776. Best score 182 bits
Score difference with first non-orthologous sequence - P.jiroveci:182 S.tridecemlineatus:182

L0PBJ0              	100.00%		I3MHF5              	100.00%
                    	       		I3MVB7              	92.75%
Bootstrap support for L0PBJ0 as seed ortholog is 100%.
Bootstrap support for I3MHF5 as seed ortholog is 100%.

Group of orthologs #777. Best score 182 bits
Score difference with first non-orthologous sequence - P.jiroveci:182 S.tridecemlineatus:182

L0PE09              	100.00%		I3MVP8              	100.00%
                    	       		I3N5Q0              	10.49%
Bootstrap support for L0PE09 as seed ortholog is 100%.
Bootstrap support for I3MVP8 as seed ortholog is 100%.

Group of orthologs #778. Best score 182 bits
Score difference with first non-orthologous sequence - P.jiroveci:182 S.tridecemlineatus:182

L0PB31              	100.00%		I3MGN2              	100.00%
Bootstrap support for L0PB31 as seed ortholog is 100%.
Bootstrap support for I3MGN2 as seed ortholog is 100%.

Group of orthologs #779. Best score 182 bits
Score difference with first non-orthologous sequence - P.jiroveci:182 S.tridecemlineatus:182

L0PAJ0              	100.00%		I3MIV1              	100.00%
Bootstrap support for L0PAJ0 as seed ortholog is 100%.
Bootstrap support for I3MIV1 as seed ortholog is 100%.

Group of orthologs #780. Best score 181 bits
Score difference with first non-orthologous sequence - P.jiroveci:181 S.tridecemlineatus:53

L0PAP9              	100.00%		I3LX97              	100.00%
                    	       		I3MDV3              	27.22%
                    	       		I3MBS1              	27.22%
Bootstrap support for L0PAP9 as seed ortholog is 100%.
Bootstrap support for I3LX97 as seed ortholog is 99%.

Group of orthologs #781. Best score 181 bits
Score difference with first non-orthologous sequence - P.jiroveci:181 S.tridecemlineatus:31

L0P967              	100.00%		I3N7T9              	100.00%
                    	       		I3MHV2              	70.83%
Bootstrap support for L0P967 as seed ortholog is 100%.
Bootstrap support for I3N7T9 as seed ortholog is 76%.

Group of orthologs #782. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 S.tridecemlineatus:180

L0PBL8              	100.00%		I3M392              	100.00%
L0PDU3              	68.54%		
Bootstrap support for L0PBL8 as seed ortholog is 100%.
Bootstrap support for I3M392 as seed ortholog is 100%.

Group of orthologs #783. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 S.tridecemlineatus:180

L0PAR2              	100.00%		I3LYI4              	100.00%
Bootstrap support for L0PAR2 as seed ortholog is 100%.
Bootstrap support for I3LYI4 as seed ortholog is 100%.

Group of orthologs #784. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 S.tridecemlineatus:180

L0PDW5              	100.00%		I3M0C1              	100.00%
Bootstrap support for L0PDW5 as seed ortholog is 100%.
Bootstrap support for I3M0C1 as seed ortholog is 100%.

Group of orthologs #785. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 S.tridecemlineatus:180

L0PE89              	100.00%		I3M9S9              	100.00%
Bootstrap support for L0PE89 as seed ortholog is 100%.
Bootstrap support for I3M9S9 as seed ortholog is 100%.

Group of orthologs #786. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 S.tridecemlineatus:180

L0PFD7              	100.00%		I3MC66              	100.00%
Bootstrap support for L0PFD7 as seed ortholog is 100%.
Bootstrap support for I3MC66 as seed ortholog is 100%.

Group of orthologs #787. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 S.tridecemlineatus:180

L0PC06              	100.00%		I3NF86              	100.00%
Bootstrap support for L0PC06 as seed ortholog is 100%.
Bootstrap support for I3NF86 as seed ortholog is 100%.

Group of orthologs #788. Best score 179 bits
Score difference with first non-orthologous sequence - P.jiroveci:179 S.tridecemlineatus:179

L0PCF8              	100.00%		I3M1V4              	100.00%
                    	       		I3MHA9              	100.00%
Bootstrap support for L0PCF8 as seed ortholog is 100%.
Bootstrap support for I3M1V4 as seed ortholog is 100%.
Bootstrap support for I3MHA9 as seed ortholog is 100%.

Group of orthologs #789. Best score 179 bits
Score difference with first non-orthologous sequence - P.jiroveci:179 S.tridecemlineatus:179

L0PC68              	100.00%		I3LY63              	100.00%
Bootstrap support for L0PC68 as seed ortholog is 100%.
Bootstrap support for I3LY63 as seed ortholog is 100%.

Group of orthologs #790. Best score 179 bits
Score difference with first non-orthologous sequence - P.jiroveci:179 S.tridecemlineatus:179

L0PAG8              	100.00%		I3MK99              	100.00%
Bootstrap support for L0PAG8 as seed ortholog is 100%.
Bootstrap support for I3MK99 as seed ortholog is 100%.

Group of orthologs #791. Best score 178 bits
Score difference with first non-orthologous sequence - P.jiroveci:178 S.tridecemlineatus:178

L0PH33              	100.00%		I3MPR0              	100.00%
                    	       		I3NHH2              	49.41%
                    	       		I3MNL8              	20.77%
                    	       		I3M6V8              	19.88%
                    	       		I3M5R2              	19.81%
                    	       		I3MQU4              	19.22%
Bootstrap support for L0PH33 as seed ortholog is 100%.
Bootstrap support for I3MPR0 as seed ortholog is 100%.

Group of orthologs #792. Best score 178 bits
Score difference with first non-orthologous sequence - P.jiroveci:178 S.tridecemlineatus:178

L0PFK7              	100.00%		I3MR80              	100.00%
                    	       		I3MPT5              	78.25%
                    	       		I3N5N3              	39.65%
                    	       		I3N2T0              	27.37%
Bootstrap support for L0PFK7 as seed ortholog is 100%.
Bootstrap support for I3MR80 as seed ortholog is 100%.

Group of orthologs #793. Best score 178 bits
Score difference with first non-orthologous sequence - P.jiroveci:178 S.tridecemlineatus:178

L0PCE0              	100.00%		I3LZE3              	100.00%
                    	       		I3N8E5              	28.51%
Bootstrap support for L0PCE0 as seed ortholog is 100%.
Bootstrap support for I3LZE3 as seed ortholog is 100%.

Group of orthologs #794. Best score 178 bits
Score difference with first non-orthologous sequence - P.jiroveci:178 S.tridecemlineatus:178

L0PG23              	100.00%		I3N9P8              	100.00%
                    	       		I3M3V2              	59.80%
Bootstrap support for L0PG23 as seed ortholog is 100%.
Bootstrap support for I3N9P8 as seed ortholog is 100%.

Group of orthologs #795. Best score 178 bits
Score difference with first non-orthologous sequence - P.jiroveci:100 S.tridecemlineatus:100

L0P7L3              	100.00%		I3MAF1              	100.00%
Bootstrap support for L0P7L3 as seed ortholog is 99%.
Bootstrap support for I3MAF1 as seed ortholog is 99%.

Group of orthologs #796. Best score 178 bits
Score difference with first non-orthologous sequence - P.jiroveci:178 S.tridecemlineatus:23

L0PAV2              	100.00%		I3M7V1              	100.00%
Bootstrap support for L0PAV2 as seed ortholog is 100%.
Bootstrap support for I3M7V1 as seed ortholog is 76%.

Group of orthologs #797. Best score 178 bits
Score difference with first non-orthologous sequence - P.jiroveci:178 S.tridecemlineatus:128

L0PGG0              	100.00%		I3MEJ4              	100.00%
Bootstrap support for L0PGG0 as seed ortholog is 100%.
Bootstrap support for I3MEJ4 as seed ortholog is 99%.

Group of orthologs #798. Best score 178 bits
Score difference with first non-orthologous sequence - P.jiroveci:178 S.tridecemlineatus:178

L0PE97              	100.00%		I3MQL3              	100.00%
Bootstrap support for L0PE97 as seed ortholog is 100%.
Bootstrap support for I3MQL3 as seed ortholog is 100%.

Group of orthologs #799. Best score 177 bits
Score difference with first non-orthologous sequence - P.jiroveci:177 S.tridecemlineatus:177

L0P8J4              	100.00%		I3M838              	100.00%
                    	       		I3M7A6              	46.37%
Bootstrap support for L0P8J4 as seed ortholog is 100%.
Bootstrap support for I3M838 as seed ortholog is 100%.

Group of orthologs #800. Best score 177 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 S.tridecemlineatus:68

L0PC81              	100.00%		I3M229              	100.00%
Bootstrap support for L0PC81 as seed ortholog is 99%.
Bootstrap support for I3M229 as seed ortholog is 95%.

Group of orthologs #801. Best score 177 bits
Score difference with first non-orthologous sequence - P.jiroveci:177 S.tridecemlineatus:135

L0P9D6              	100.00%		I3M818              	100.00%
Bootstrap support for L0P9D6 as seed ortholog is 100%.
Bootstrap support for I3M818 as seed ortholog is 99%.

Group of orthologs #802. Best score 177 bits
Score difference with first non-orthologous sequence - P.jiroveci:46 S.tridecemlineatus:96

L0PAQ4              	100.00%		I3MMB3              	100.00%
Bootstrap support for L0PAQ4 as seed ortholog is 89%.
Bootstrap support for I3MMB3 as seed ortholog is 99%.

Group of orthologs #803. Best score 177 bits
Score difference with first non-orthologous sequence - P.jiroveci:177 S.tridecemlineatus:0

L0PEF1              	100.00%		I3MK70              	100.00%
Bootstrap support for L0PEF1 as seed ortholog is 100%.
Bootstrap support for I3MK70 as seed ortholog is 48%.
Alternative seed ortholog is I3MS62 (0 bits away from this cluster)

Group of orthologs #804. Best score 176 bits
Score difference with first non-orthologous sequence - P.jiroveci:176 S.tridecemlineatus:176

L0PDL8              	100.00%		I3MGH1              	100.00%
L0PD52              	90.69%		
Bootstrap support for L0PDL8 as seed ortholog is 100%.
Bootstrap support for I3MGH1 as seed ortholog is 100%.

Group of orthologs #805. Best score 176 bits
Score difference with first non-orthologous sequence - P.jiroveci:176 S.tridecemlineatus:176

L0PGW6              	100.00%		I3MEK7              	100.00%
                    	       		I3N3I2              	28.04%
Bootstrap support for L0PGW6 as seed ortholog is 100%.
Bootstrap support for I3MEK7 as seed ortholog is 100%.

Group of orthologs #806. Best score 176 bits
Score difference with first non-orthologous sequence - P.jiroveci:176 S.tridecemlineatus:176

L0PC50              	100.00%		I3MMT2              	100.00%
Bootstrap support for L0PC50 as seed ortholog is 100%.
Bootstrap support for I3MMT2 as seed ortholog is 100%.

Group of orthologs #807. Best score 176 bits
Score difference with first non-orthologous sequence - P.jiroveci:176 S.tridecemlineatus:62

L0PBX9              	100.00%		I3NB59              	100.00%
Bootstrap support for L0PBX9 as seed ortholog is 100%.
Bootstrap support for I3NB59 as seed ortholog is 86%.

Group of orthologs #808. Best score 175 bits
Score difference with first non-orthologous sequence - P.jiroveci:175 S.tridecemlineatus:175

L0P8Z2              	100.00%		I3MTZ1              	100.00%
                    	       		I3LZI7              	71.55%
                    	       		I3MXS9              	70.71%
                    	       		I3MZY6              	54.81%
                    	       		I3MUA7              	54.39%
Bootstrap support for L0P8Z2 as seed ortholog is 100%.
Bootstrap support for I3MTZ1 as seed ortholog is 100%.

Group of orthologs #809. Best score 175 bits
Score difference with first non-orthologous sequence - P.jiroveci:175 S.tridecemlineatus:175

L0PA28              	100.00%		I3M4G6              	100.00%
                    	       		I3LY53              	34.98%
Bootstrap support for L0PA28 as seed ortholog is 100%.
Bootstrap support for I3M4G6 as seed ortholog is 100%.

Group of orthologs #810. Best score 175 bits
Score difference with first non-orthologous sequence - P.jiroveci:175 S.tridecemlineatus:175

L0PFP1              	100.00%		I3M1Q7              	100.00%
L0PC71              	75.00%		
Bootstrap support for L0PFP1 as seed ortholog is 100%.
Bootstrap support for I3M1Q7 as seed ortholog is 100%.

Group of orthologs #811. Best score 175 bits
Score difference with first non-orthologous sequence - P.jiroveci:175 S.tridecemlineatus:75

L0PH23              	100.00%		I3LXW5              	100.00%
Bootstrap support for L0PH23 as seed ortholog is 100%.
Bootstrap support for I3LXW5 as seed ortholog is 99%.

Group of orthologs #812. Best score 175 bits
Score difference with first non-orthologous sequence - P.jiroveci:175 S.tridecemlineatus:175

L0PBL9              	100.00%		I3M4S2              	100.00%
Bootstrap support for L0PBL9 as seed ortholog is 100%.
Bootstrap support for I3M4S2 as seed ortholog is 100%.

Group of orthologs #813. Best score 175 bits
Score difference with first non-orthologous sequence - P.jiroveci:175 S.tridecemlineatus:175

L0P8D5              	100.00%		I3N1I3              	100.00%
Bootstrap support for L0P8D5 as seed ortholog is 100%.
Bootstrap support for I3N1I3 as seed ortholog is 100%.

Group of orthologs #814. Best score 174 bits
Score difference with first non-orthologous sequence - P.jiroveci:174 S.tridecemlineatus:174

L0PGZ5              	100.00%		I3M8J7              	100.00%
Bootstrap support for L0PGZ5 as seed ortholog is 100%.
Bootstrap support for I3M8J7 as seed ortholog is 100%.

Group of orthologs #815. Best score 173 bits
Score difference with first non-orthologous sequence - P.jiroveci:173 S.tridecemlineatus:173

L0PC20              	100.00%		I3MQT2              	100.00%
Bootstrap support for L0PC20 as seed ortholog is 100%.
Bootstrap support for I3MQT2 as seed ortholog is 100%.

Group of orthologs #816. Best score 173 bits
Score difference with first non-orthologous sequence - P.jiroveci:123 S.tridecemlineatus:59

L0PDG6              	100.00%		I3MPD1              	100.00%
Bootstrap support for L0PDG6 as seed ortholog is 99%.
Bootstrap support for I3MPD1 as seed ortholog is 94%.

Group of orthologs #817. Best score 172 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 S.tridecemlineatus:88

L0PDC4              	100.00%		I3LZU1              	100.00%
L0PBK4              	10.76%		
Bootstrap support for L0PDC4 as seed ortholog is 99%.
Bootstrap support for I3LZU1 as seed ortholog is 99%.

Group of orthologs #818. Best score 172 bits
Score difference with first non-orthologous sequence - P.jiroveci:172 S.tridecemlineatus:110

L0PC70              	100.00%		I3LYU8              	100.00%
Bootstrap support for L0PC70 as seed ortholog is 100%.
Bootstrap support for I3LYU8 as seed ortholog is 100%.

Group of orthologs #819. Best score 172 bits
Score difference with first non-orthologous sequence - P.jiroveci:172 S.tridecemlineatus:172

L0P8C9              	100.00%		I3N0V1              	100.00%
Bootstrap support for L0P8C9 as seed ortholog is 100%.
Bootstrap support for I3N0V1 as seed ortholog is 100%.

Group of orthologs #820. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 S.tridecemlineatus:20

L0PGM0              	100.00%		I3MRC2              	100.00%
                    	       		I3MRW2              	100.00%
                    	       		I3NF17              	70.26%
                    	       		I3MGP2              	50.77%
Bootstrap support for L0PGM0 as seed ortholog is 99%.
Bootstrap support for I3MRC2 as seed ortholog is 80%.
Bootstrap support for I3MRW2 as seed ortholog is 80%.

Group of orthologs #821. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 S.tridecemlineatus:171

L0PFG0              	100.00%		I3N7P4              	100.00%
                    	       		I3MQN0              	74.28%
                    	       		I3N254              	43.03%
Bootstrap support for L0PFG0 as seed ortholog is 100%.
Bootstrap support for I3N7P4 as seed ortholog is 100%.

Group of orthologs #822. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 S.tridecemlineatus:171

L0P9L8              	100.00%		I3M8C3              	100.00%
Bootstrap support for L0P9L8 as seed ortholog is 100%.
Bootstrap support for I3M8C3 as seed ortholog is 100%.

Group of orthologs #823. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 S.tridecemlineatus:171

L0PFH2              	100.00%		I3MY47              	100.00%
Bootstrap support for L0PFH2 as seed ortholog is 100%.
Bootstrap support for I3MY47 as seed ortholog is 100%.

Group of orthologs #824. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 S.tridecemlineatus:67

L0PBL5              	100.00%		I3N3H3              	100.00%
Bootstrap support for L0PBL5 as seed ortholog is 100%.
Bootstrap support for I3N3H3 as seed ortholog is 98%.

Group of orthologs #825. Best score 170 bits
Score difference with first non-orthologous sequence - P.jiroveci:126 S.tridecemlineatus:170

L0PE37              	100.00%		I3NFD1              	100.00%
                    	       		I3NCA9              	76.83%
Bootstrap support for L0PE37 as seed ortholog is 100%.
Bootstrap support for I3NFD1 as seed ortholog is 100%.

Group of orthologs #826. Best score 170 bits
Score difference with first non-orthologous sequence - P.jiroveci:170 S.tridecemlineatus:70

L0PEI1              	100.00%		I3MIB8              	100.00%
Bootstrap support for L0PEI1 as seed ortholog is 100%.
Bootstrap support for I3MIB8 as seed ortholog is 99%.

Group of orthologs #827. Best score 170 bits
Score difference with first non-orthologous sequence - P.jiroveci:170 S.tridecemlineatus:170

L0PA27              	100.00%		I3N565              	100.00%
Bootstrap support for L0PA27 as seed ortholog is 100%.
Bootstrap support for I3N565 as seed ortholog is 100%.

Group of orthologs #828. Best score 169 bits
Score difference with first non-orthologous sequence - P.jiroveci:169 S.tridecemlineatus:169

L0P8V3              	100.00%		I3M2V3              	100.00%
Bootstrap support for L0P8V3 as seed ortholog is 100%.
Bootstrap support for I3M2V3 as seed ortholog is 100%.

Group of orthologs #829. Best score 169 bits
Score difference with first non-orthologous sequence - P.jiroveci:169 S.tridecemlineatus:169

L0P9G6              	100.00%		I3MVS0              	100.00%
Bootstrap support for L0P9G6 as seed ortholog is 100%.
Bootstrap support for I3MVS0 as seed ortholog is 100%.

Group of orthologs #830. Best score 169 bits
Score difference with first non-orthologous sequence - P.jiroveci:169 S.tridecemlineatus:169

L0PD40              	100.00%		I3NC41              	100.00%
Bootstrap support for L0PD40 as seed ortholog is 100%.
Bootstrap support for I3NC41 as seed ortholog is 100%.

Group of orthologs #831. Best score 168 bits
Score difference with first non-orthologous sequence - P.jiroveci:168 S.tridecemlineatus:66

L0PB30              	100.00%		I3MCP4              	100.00%
                    	       		I3N4Q1              	40.91%
                    	       		I3MA32              	29.17%
Bootstrap support for L0PB30 as seed ortholog is 100%.
Bootstrap support for I3MCP4 as seed ortholog is 98%.

Group of orthologs #832. Best score 168 bits
Score difference with first non-orthologous sequence - P.jiroveci:168 S.tridecemlineatus:27

L0PGJ5              	100.00%		I3LXR9              	100.00%
Bootstrap support for L0PGJ5 as seed ortholog is 100%.
Bootstrap support for I3LXR9 as seed ortholog is 69%.
Alternative seed ortholog is I3NED9 (27 bits away from this cluster)

Group of orthologs #833. Best score 168 bits
Score difference with first non-orthologous sequence - P.jiroveci:168 S.tridecemlineatus:168

L0PE43              	100.00%		I3M0I0              	100.00%
Bootstrap support for L0PE43 as seed ortholog is 100%.
Bootstrap support for I3M0I0 as seed ortholog is 100%.

Group of orthologs #834. Best score 168 bits
Score difference with first non-orthologous sequence - P.jiroveci:168 S.tridecemlineatus:168

L0PH54              	100.00%		I3MEC7              	100.00%
Bootstrap support for L0PH54 as seed ortholog is 100%.
Bootstrap support for I3MEC7 as seed ortholog is 100%.

Group of orthologs #835. Best score 168 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 S.tridecemlineatus:31

L0PCI0              	100.00%		I3MK77              	100.00%
Bootstrap support for L0PCI0 as seed ortholog is 88%.
Bootstrap support for I3MK77 as seed ortholog is 67%.
Alternative seed ortholog is I3NFA3 (31 bits away from this cluster)

Group of orthologs #836. Best score 168 bits
Score difference with first non-orthologous sequence - P.jiroveci:168 S.tridecemlineatus:168

L0PG54              	100.00%		I3MJY2              	100.00%
Bootstrap support for L0PG54 as seed ortholog is 100%.
Bootstrap support for I3MJY2 as seed ortholog is 100%.

Group of orthologs #837. Best score 168 bits
Score difference with first non-orthologous sequence - P.jiroveci:168 S.tridecemlineatus:76

L0PAG4              	100.00%		I3MYV7              	100.00%
Bootstrap support for L0PAG4 as seed ortholog is 100%.
Bootstrap support for I3MYV7 as seed ortholog is 99%.

Group of orthologs #838. Best score 168 bits
Score difference with first non-orthologous sequence - P.jiroveci:168 S.tridecemlineatus:168

L0PEA9              	100.00%		I3MY85              	100.00%
Bootstrap support for L0PEA9 as seed ortholog is 100%.
Bootstrap support for I3MY85 as seed ortholog is 100%.

Group of orthologs #839. Best score 167 bits
Score difference with first non-orthologous sequence - P.jiroveci:167 S.tridecemlineatus:110

L0PC66              	100.00%		I3MU70              	100.00%
L0PBN8              	74.07%		I3M204              	34.82%
Bootstrap support for L0PC66 as seed ortholog is 100%.
Bootstrap support for I3MU70 as seed ortholog is 100%.

Group of orthologs #840. Best score 167 bits
Score difference with first non-orthologous sequence - P.jiroveci:167 S.tridecemlineatus:167

L0P9W6              	100.00%		I3NHF4              	100.00%
Bootstrap support for L0P9W6 as seed ortholog is 100%.
Bootstrap support for I3NHF4 as seed ortholog is 100%.

Group of orthologs #841. Best score 166 bits
Score difference with first non-orthologous sequence - P.jiroveci:166 S.tridecemlineatus:30

L0PEN4              	100.00%		I3N078              	100.00%
                    	       		I3MNQ0              	17.88%
Bootstrap support for L0PEN4 as seed ortholog is 100%.
Bootstrap support for I3N078 as seed ortholog is 69%.
Alternative seed ortholog is I3MBY4 (30 bits away from this cluster)

Group of orthologs #842. Best score 166 bits
Score difference with first non-orthologous sequence - P.jiroveci:166 S.tridecemlineatus:166

L0P780              	100.00%		I3M4V1              	100.00%
Bootstrap support for L0P780 as seed ortholog is 100%.
Bootstrap support for I3M4V1 as seed ortholog is 100%.

Group of orthologs #843. Best score 166 bits
Score difference with first non-orthologous sequence - P.jiroveci:166 S.tridecemlineatus:166

L0PGK0              	100.00%		I3MDG5              	100.00%
Bootstrap support for L0PGK0 as seed ortholog is 100%.
Bootstrap support for I3MDG5 as seed ortholog is 100%.

Group of orthologs #844. Best score 166 bits
Score difference with first non-orthologous sequence - P.jiroveci:166 S.tridecemlineatus:13

L0PDX9              	100.00%		I3NAJ3              	100.00%
Bootstrap support for L0PDX9 as seed ortholog is 100%.
Bootstrap support for I3NAJ3 as seed ortholog is 71%.
Alternative seed ortholog is I3MDY6 (13 bits away from this cluster)

Group of orthologs #845. Best score 165 bits
Score difference with first non-orthologous sequence - P.jiroveci:165 S.tridecemlineatus:165

L0P9T6              	100.00%		I3M0S4              	100.00%
                    	       		I3N0P0              	40.19%
Bootstrap support for L0P9T6 as seed ortholog is 100%.
Bootstrap support for I3M0S4 as seed ortholog is 100%.

Group of orthologs #846. Best score 165 bits
Score difference with first non-orthologous sequence - P.jiroveci:93 S.tridecemlineatus:93

L0PFK9              	100.00%		I3MP28              	100.00%
                    	       		I3N9R2              	22.42%
Bootstrap support for L0PFK9 as seed ortholog is 99%.
Bootstrap support for I3MP28 as seed ortholog is 99%.

Group of orthologs #847. Best score 165 bits
Score difference with first non-orthologous sequence - P.jiroveci:165 S.tridecemlineatus:165

L0PDP9              	100.00%		I3MNG4              	100.00%
Bootstrap support for L0PDP9 as seed ortholog is 100%.
Bootstrap support for I3MNG4 as seed ortholog is 100%.

Group of orthologs #848. Best score 165 bits
Score difference with first non-orthologous sequence - P.jiroveci:165 S.tridecemlineatus:165

L0PDA4              	100.00%		I3MR52              	100.00%
Bootstrap support for L0PDA4 as seed ortholog is 100%.
Bootstrap support for I3MR52 as seed ortholog is 100%.

Group of orthologs #849. Best score 164 bits
Score difference with first non-orthologous sequence - P.jiroveci:164 S.tridecemlineatus:164

L0PA78              	100.00%		I3LY91              	100.00%
                    	       		I3LXF3              	56.03%
Bootstrap support for L0PA78 as seed ortholog is 100%.
Bootstrap support for I3LY91 as seed ortholog is 100%.

Group of orthologs #850. Best score 164 bits
Score difference with first non-orthologous sequence - P.jiroveci:164 S.tridecemlineatus:164

L0PA65              	100.00%		I3LXK2              	100.00%
Bootstrap support for L0PA65 as seed ortholog is 100%.
Bootstrap support for I3LXK2 as seed ortholog is 100%.

Group of orthologs #851. Best score 164 bits
Score difference with first non-orthologous sequence - P.jiroveci:164 S.tridecemlineatus:164

L0PEX0              	100.00%		I3MR42              	100.00%
Bootstrap support for L0PEX0 as seed ortholog is 100%.
Bootstrap support for I3MR42 as seed ortholog is 100%.

Group of orthologs #852. Best score 163 bits
Score difference with first non-orthologous sequence - P.jiroveci:163 S.tridecemlineatus:163

L0PFX0              	100.00%		I3MDU3              	100.00%
                    	       		I3M5X8              	64.80%
Bootstrap support for L0PFX0 as seed ortholog is 100%.
Bootstrap support for I3MDU3 as seed ortholog is 100%.

Group of orthologs #853. Best score 163 bits
Score difference with first non-orthologous sequence - P.jiroveci:163 S.tridecemlineatus:163

L0PGF9              	100.00%		I3M2T8              	100.00%
Bootstrap support for L0PGF9 as seed ortholog is 100%.
Bootstrap support for I3M2T8 as seed ortholog is 100%.

Group of orthologs #854. Best score 163 bits
Score difference with first non-orthologous sequence - P.jiroveci:163 S.tridecemlineatus:163

L0PFH7              	100.00%		I3ME80              	100.00%
Bootstrap support for L0PFH7 as seed ortholog is 100%.
Bootstrap support for I3ME80 as seed ortholog is 100%.

Group of orthologs #855. Best score 163 bits
Score difference with first non-orthologous sequence - P.jiroveci:163 S.tridecemlineatus:41

L0PD97              	100.00%		I3MU98              	100.00%
Bootstrap support for L0PD97 as seed ortholog is 100%.
Bootstrap support for I3MU98 as seed ortholog is 93%.

Group of orthologs #856. Best score 162 bits
Score difference with first non-orthologous sequence - P.jiroveci:110 S.tridecemlineatus:33

L0PE79              	100.00%		I3MDQ1              	100.00%
                    	       		I3NBL5              	77.17%
                    	       		I3MT44              	76.26%
                    	       		I3MSC2              	17.81%
                    	       		I3MB50              	14.16%
                    	       		I3NE69              	10.96%
                    	       		I3MJC5              	10.50%
                    	       		I3LZC6              	10.05%
                    	       		I3LY59              	8.22%
                    	       		I3N8G7              	8.22%
                    	       		I3MGY1              	7.31%
                    	       		I3N0C5              	7.31%
                    	       		I3NDC1              	6.85%
Bootstrap support for L0PE79 as seed ortholog is 99%.
Bootstrap support for I3MDQ1 as seed ortholog is 85%.

Group of orthologs #857. Best score 162 bits
Score difference with first non-orthologous sequence - P.jiroveci:70 S.tridecemlineatus:30

L0PAS2              	100.00%		I3LZW4              	100.00%
                    	       		I3LYY0              	67.52%
                    	       		I3MDL8              	66.67%
Bootstrap support for L0PAS2 as seed ortholog is 99%.
Bootstrap support for I3LZW4 as seed ortholog is 89%.

Group of orthologs #858. Best score 162 bits
Score difference with first non-orthologous sequence - P.jiroveci:162 S.tridecemlineatus:162

L0PE13              	100.00%		I3M5B9              	100.00%
                    	       		I3MTQ7              	79.59%
Bootstrap support for L0PE13 as seed ortholog is 100%.
Bootstrap support for I3M5B9 as seed ortholog is 100%.

Group of orthologs #859. Best score 162 bits
Score difference with first non-orthologous sequence - P.jiroveci:162 S.tridecemlineatus:162

L0P9G8              	100.00%		I3MJ74              	100.00%
L0PDI0              	50.55%		
Bootstrap support for L0P9G8 as seed ortholog is 100%.
Bootstrap support for I3MJ74 as seed ortholog is 100%.

Group of orthologs #860. Best score 162 bits
Score difference with first non-orthologous sequence - P.jiroveci:162 S.tridecemlineatus:162

L0P7V8              	100.00%		I3MJ75              	100.00%
Bootstrap support for L0P7V8 as seed ortholog is 100%.
Bootstrap support for I3MJ75 as seed ortholog is 100%.

Group of orthologs #861. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 S.tridecemlineatus:57

L0PBL1              	100.00%		I3MKQ6              	100.00%
                    	       		I3NA99              	42.56%
                    	       		I3MD08              	34.43%
                    	       		I3N817              	25.61%
Bootstrap support for L0PBL1 as seed ortholog is 100%.
Bootstrap support for I3MKQ6 as seed ortholog is 85%.

Group of orthologs #862. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 S.tridecemlineatus:161

L0P9X0              	100.00%		I3M8S5              	100.00%
                    	       		I3NGC2              	58.85%
                    	       		I3MU04              	49.28%
Bootstrap support for L0P9X0 as seed ortholog is 100%.
Bootstrap support for I3M8S5 as seed ortholog is 100%.

Group of orthologs #863. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 S.tridecemlineatus:100

L0PBX0              	100.00%		I3MSA3              	100.00%
                    	       		I3MTV4              	25.37%
Bootstrap support for L0PBX0 as seed ortholog is 100%.
Bootstrap support for I3MSA3 as seed ortholog is 99%.

Group of orthologs #864. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 S.tridecemlineatus:161

L0PCG3              	100.00%		I3MYA9              	100.00%
                    	       		I3MVF4              	56.30%
Bootstrap support for L0PCG3 as seed ortholog is 100%.
Bootstrap support for I3MYA9 as seed ortholog is 100%.

Group of orthologs #865. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 S.tridecemlineatus:161

L0PAB8              	100.00%		I3M0Q0              	100.00%
Bootstrap support for L0PAB8 as seed ortholog is 100%.
Bootstrap support for I3M0Q0 as seed ortholog is 100%.

Group of orthologs #866. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 S.tridecemlineatus:161

L0PF39              	100.00%		I3M0X6              	100.00%
Bootstrap support for L0PF39 as seed ortholog is 100%.
Bootstrap support for I3M0X6 as seed ortholog is 100%.

Group of orthologs #867. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 S.tridecemlineatus:161

L0PFP7              	100.00%		I3M1D0              	100.00%
Bootstrap support for L0PFP7 as seed ortholog is 100%.
Bootstrap support for I3M1D0 as seed ortholog is 100%.

Group of orthologs #868. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 S.tridecemlineatus:161

L0PAY0              	100.00%		I3M8Z7              	100.00%
Bootstrap support for L0PAY0 as seed ortholog is 100%.
Bootstrap support for I3M8Z7 as seed ortholog is 100%.

Group of orthologs #869. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 S.tridecemlineatus:160

L0PCP5              	100.00%		I3M6B6              	100.00%
                    	       		I3N0G6              	43.93%
Bootstrap support for L0PCP5 as seed ortholog is 100%.
Bootstrap support for I3M6B6 as seed ortholog is 100%.

Group of orthologs #870. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 S.tridecemlineatus:113

L0PFW9              	100.00%		I3MD45              	100.00%
                    	       		I3MZD6              	44.75%
Bootstrap support for L0PFW9 as seed ortholog is 100%.
Bootstrap support for I3MD45 as seed ortholog is 99%.

Group of orthologs #871. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 S.tridecemlineatus:61

L0P7D0              	100.00%		I3MMP5              	100.00%
                    	       		I3NBE4              	25.51%
Bootstrap support for L0P7D0 as seed ortholog is 100%.
Bootstrap support for I3MMP5 as seed ortholog is 97%.

Group of orthologs #872. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 S.tridecemlineatus:160

L0PCA8              	100.00%		I3MML5              	100.00%
                    	       		I3MV52              	90.83%
Bootstrap support for L0PCA8 as seed ortholog is 100%.
Bootstrap support for I3MML5 as seed ortholog is 100%.

Group of orthologs #873. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 S.tridecemlineatus:160

L0P962              	100.00%		I3M2M4              	100.00%
Bootstrap support for L0P962 as seed ortholog is 100%.
Bootstrap support for I3M2M4 as seed ortholog is 100%.

Group of orthologs #874. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 S.tridecemlineatus:119

L0P7Z9              	100.00%		I3M451              	100.00%
Bootstrap support for L0P7Z9 as seed ortholog is 100%.
Bootstrap support for I3M451 as seed ortholog is 100%.

Group of orthologs #875. Best score 159 bits
Score difference with first non-orthologous sequence - P.jiroveci:159 S.tridecemlineatus:62

L0PBR7              	100.00%		I3NEZ7              	100.00%
                    	       		I3N5Y4              	96.59%
                    	       		I3N6N0              	93.18%
                    	       		I3NAA7              	92.05%
                    	       		I3MUG9              	92.05%
                    	       		I3N8F0              	92.05%
                    	       		I3MZB0              	89.77%
                    	       		I3MY06              	57.95%
Bootstrap support for L0PBR7 as seed ortholog is 100%.
Bootstrap support for I3NEZ7 as seed ortholog is 99%.

Group of orthologs #876. Best score 159 bits
Score difference with first non-orthologous sequence - P.jiroveci:159 S.tridecemlineatus:69

L0P9F8              	100.00%		I3M6R9              	100.00%
                    	       		I3M2P4              	19.10%
Bootstrap support for L0P9F8 as seed ortholog is 100%.
Bootstrap support for I3M6R9 as seed ortholog is 97%.

Group of orthologs #877. Best score 159 bits
Score difference with first non-orthologous sequence - P.jiroveci:33 S.tridecemlineatus:159

L0PCJ0              	100.00%		I3M396              	100.00%
Bootstrap support for L0PCJ0 as seed ortholog is 70%.
Alternative seed ortholog is L0PGZ6 (33 bits away from this cluster)
Bootstrap support for I3M396 as seed ortholog is 100%.

Group of orthologs #878. Best score 159 bits
Score difference with first non-orthologous sequence - P.jiroveci:159 S.tridecemlineatus:159

L0PEN8              	100.00%		I3M4P2              	100.00%
Bootstrap support for L0PEN8 as seed ortholog is 100%.
Bootstrap support for I3M4P2 as seed ortholog is 100%.

Group of orthologs #879. Best score 158 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 S.tridecemlineatus:84

L0PEX6              	100.00%		I3MIU9              	100.00%
                    	       		I3N8D8              	12.99%
                    	       		I3NG46              	12.43%
                    	       		I3N409              	7.91%
Bootstrap support for L0PEX6 as seed ortholog is 99%.
Bootstrap support for I3MIU9 as seed ortholog is 99%.

Group of orthologs #880. Best score 158 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 S.tridecemlineatus:8

L0PFZ5              	100.00%		I3LW64              	100.00%
                    	       		I3MZU8              	46.19%
Bootstrap support for L0PFZ5 as seed ortholog is 99%.
Bootstrap support for I3LW64 as seed ortholog is 53%.
Alternative seed ortholog is I3MAT2 (8 bits away from this cluster)

Group of orthologs #881. Best score 158 bits
Score difference with first non-orthologous sequence - P.jiroveci:158 S.tridecemlineatus:158

L0PFX5              	100.00%		I3MEI2              	100.00%
Bootstrap support for L0PFX5 as seed ortholog is 100%.
Bootstrap support for I3MEI2 as seed ortholog is 100%.

Group of orthologs #882. Best score 158 bits
Score difference with first non-orthologous sequence - P.jiroveci:158 S.tridecemlineatus:158

L0P8H6              	100.00%		I3N3V2              	100.00%
Bootstrap support for L0P8H6 as seed ortholog is 100%.
Bootstrap support for I3N3V2 as seed ortholog is 100%.

Group of orthologs #883. Best score 158 bits
Score difference with first non-orthologous sequence - P.jiroveci:158 S.tridecemlineatus:158

L0PGI9              	100.00%		I3N501              	100.00%
Bootstrap support for L0PGI9 as seed ortholog is 100%.
Bootstrap support for I3N501 as seed ortholog is 100%.

Group of orthologs #884. Best score 158 bits
Score difference with first non-orthologous sequence - P.jiroveci:158 S.tridecemlineatus:158

L0PCP0              	100.00%		I3NE94              	100.00%
Bootstrap support for L0PCP0 as seed ortholog is 100%.
Bootstrap support for I3NE94 as seed ortholog is 100%.

Group of orthologs #885. Best score 157 bits
Score difference with first non-orthologous sequence - P.jiroveci:157 S.tridecemlineatus:157

L0PFQ7              	100.00%		I3M1U8              	100.00%
Bootstrap support for L0PFQ7 as seed ortholog is 100%.
Bootstrap support for I3M1U8 as seed ortholog is 100%.

Group of orthologs #886. Best score 157 bits
Score difference with first non-orthologous sequence - P.jiroveci:157 S.tridecemlineatus:157

L0PHR8              	100.00%		I3MD42              	100.00%
Bootstrap support for L0PHR8 as seed ortholog is 100%.
Bootstrap support for I3MD42 as seed ortholog is 100%.

Group of orthologs #887. Best score 157 bits
Score difference with first non-orthologous sequence - P.jiroveci:157 S.tridecemlineatus:157

L0PCY0              	100.00%		I3NCZ3              	100.00%
Bootstrap support for L0PCY0 as seed ortholog is 100%.
Bootstrap support for I3NCZ3 as seed ortholog is 100%.

Group of orthologs #888. Best score 156 bits
Score difference with first non-orthologous sequence - P.jiroveci:156 S.tridecemlineatus:156

L0P8Y0              	100.00%		I3M684              	100.00%
Bootstrap support for L0P8Y0 as seed ortholog is 100%.
Bootstrap support for I3M684 as seed ortholog is 100%.

Group of orthologs #889. Best score 155 bits
Score difference with first non-orthologous sequence - P.jiroveci:155 S.tridecemlineatus:155

L0P8S1              	100.00%		I3MPU3              	100.00%
                    	       		I3NAK2              	33.96%
                    	       		I3MY93              	23.11%
                    	       		I3MR24              	9.43%
Bootstrap support for L0P8S1 as seed ortholog is 100%.
Bootstrap support for I3MPU3 as seed ortholog is 100%.

Group of orthologs #890. Best score 155 bits
Score difference with first non-orthologous sequence - P.jiroveci:155 S.tridecemlineatus:155

L0PEN3              	100.00%		I3MJ39              	100.00%
Bootstrap support for L0PEN3 as seed ortholog is 100%.
Bootstrap support for I3MJ39 as seed ortholog is 100%.

Group of orthologs #891. Best score 155 bits
Score difference with first non-orthologous sequence - P.jiroveci:155 S.tridecemlineatus:155

L0PDH1              	100.00%		I3N2A1              	100.00%
Bootstrap support for L0PDH1 as seed ortholog is 100%.
Bootstrap support for I3N2A1 as seed ortholog is 100%.

Group of orthologs #892. Best score 154 bits
Score difference with first non-orthologous sequence - P.jiroveci:154 S.tridecemlineatus:154

L0PF65              	100.00%		I3M7G5              	100.00%
Bootstrap support for L0PF65 as seed ortholog is 100%.
Bootstrap support for I3M7G5 as seed ortholog is 100%.

Group of orthologs #893. Best score 153 bits
Score difference with first non-orthologous sequence - P.jiroveci:153 S.tridecemlineatus:153

L0PE18              	100.00%		I3ME46              	100.00%
                    	       		I3MMH5              	78.40%
                    	       		I3M2U8              	77.99%
                    	       		I3M6G0              	77.99%
                    	       		I3MAP1              	76.06%
                    	       		I3MHM2              	75.35%
                    	       		I3MAM3              	73.73%
                    	       		I3MCC5              	68.76%
                    	       		I3MSB5              	33.67%
                    	       		I3N8Y2              	33.47%
                    	       		I3NCA1              	32.76%
                    	       		I3MHK4              	32.35%
                    	       		I3MIF6              	31.24%
                    	       		I3NH64              	26.57%
                    	       		I3MH47              	25.66%
                    	       		I3MUR2              	20.59%
                    	       		I3NFT9              	18.36%
                    	       		I3NGB0              	14.40%
                    	       		I3NCH9              	14.20%
                    	       		I3LY68              	14.00%
                    	       		I3MQG8              	11.56%
                    	       		I3LWE8              	8.11%
                    	       		I3N7Y6              	6.19%
Bootstrap support for L0PE18 as seed ortholog is 100%.
Bootstrap support for I3ME46 as seed ortholog is 100%.

Group of orthologs #894. Best score 153 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 S.tridecemlineatus:47

L0PDE1              	100.00%		I3MGU2              	100.00%
                    	       		I3MPM8              	8.92%
                    	       		I3N4X0              	6.16%
Bootstrap support for L0PDE1 as seed ortholog is 96%.
Bootstrap support for I3MGU2 as seed ortholog is 91%.

Group of orthologs #895. Best score 153 bits
Score difference with first non-orthologous sequence - P.jiroveci:153 S.tridecemlineatus:64

L0PE53              	100.00%		I3M8D4              	100.00%
                    	       		I3MER8              	18.81%
Bootstrap support for L0PE53 as seed ortholog is 100%.
Bootstrap support for I3M8D4 as seed ortholog is 93%.

Group of orthologs #896. Best score 153 bits
Score difference with first non-orthologous sequence - P.jiroveci:153 S.tridecemlineatus:78

L0PF33              	100.00%		I3MHX9              	100.00%
                    	       		I3M5K5              	24.36%
Bootstrap support for L0PF33 as seed ortholog is 100%.
Bootstrap support for I3MHX9 as seed ortholog is 99%.

Group of orthologs #897. Best score 153 bits
Score difference with first non-orthologous sequence - P.jiroveci:153 S.tridecemlineatus:153

L0PD70              	100.00%		I3MR32              	100.00%
L0P9Q7              	82.08%		
Bootstrap support for L0PD70 as seed ortholog is 100%.
Bootstrap support for I3MR32 as seed ortholog is 100%.

Group of orthologs #898. Best score 153 bits
Score difference with first non-orthologous sequence - P.jiroveci:153 S.tridecemlineatus:153

L0P9Q6              	100.00%		I3M1W6              	100.00%
Bootstrap support for L0P9Q6 as seed ortholog is 100%.
Bootstrap support for I3M1W6 as seed ortholog is 100%.

Group of orthologs #899. Best score 153 bits
Score difference with first non-orthologous sequence - P.jiroveci:35 S.tridecemlineatus:153

L0PGP9              	100.00%		I3MM59              	100.00%
Bootstrap support for L0PGP9 as seed ortholog is 84%.
Bootstrap support for I3MM59 as seed ortholog is 100%.

Group of orthologs #900. Best score 153 bits
Score difference with first non-orthologous sequence - P.jiroveci:153 S.tridecemlineatus:103

L0PDS6              	100.00%		I3N249              	100.00%
Bootstrap support for L0PDS6 as seed ortholog is 100%.
Bootstrap support for I3N249 as seed ortholog is 99%.

Group of orthologs #901. Best score 152 bits
Score difference with first non-orthologous sequence - P.jiroveci:152 S.tridecemlineatus:152

L0PDV9              	100.00%		I3MX20              	100.00%
                    	       		I3MSQ3              	68.87%
Bootstrap support for L0PDV9 as seed ortholog is 100%.
Bootstrap support for I3MX20 as seed ortholog is 100%.

Group of orthologs #902. Best score 152 bits
Score difference with first non-orthologous sequence - P.jiroveci:152 S.tridecemlineatus:152

L0P8J7              	100.00%		I3MLW1              	100.00%
Bootstrap support for L0P8J7 as seed ortholog is 100%.
Bootstrap support for I3MLW1 as seed ortholog is 100%.

Group of orthologs #903. Best score 152 bits
Score difference with first non-orthologous sequence - P.jiroveci:152 S.tridecemlineatus:152

L0P852              	100.00%		I3NH80              	100.00%
Bootstrap support for L0P852 as seed ortholog is 100%.
Bootstrap support for I3NH80 as seed ortholog is 100%.

Group of orthologs #904. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 S.tridecemlineatus:151

L0PF66              	100.00%		I3N570              	100.00%
                    	       		I3M5B2              	77.73%
                    	       		I3M4K3              	65.55%
Bootstrap support for L0PF66 as seed ortholog is 100%.
Bootstrap support for I3N570 as seed ortholog is 100%.

Group of orthologs #905. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 S.tridecemlineatus:151

L0PAS1              	100.00%		I3M7A0              	100.00%
Bootstrap support for L0PAS1 as seed ortholog is 100%.
Bootstrap support for I3M7A0 as seed ortholog is 100%.

Group of orthologs #906. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 S.tridecemlineatus:151

L0PB59              	100.00%		I3M9U3              	100.00%
Bootstrap support for L0PB59 as seed ortholog is 100%.
Bootstrap support for I3M9U3 as seed ortholog is 100%.

Group of orthologs #907. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 S.tridecemlineatus:151

L0P7U2              	100.00%		I3MMF0              	100.00%
Bootstrap support for L0P7U2 as seed ortholog is 100%.
Bootstrap support for I3MMF0 as seed ortholog is 100%.

Group of orthologs #908. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 S.tridecemlineatus:50

L0P903              	100.00%		I3NCC2              	100.00%
Bootstrap support for L0P903 as seed ortholog is 100%.
Bootstrap support for I3NCC2 as seed ortholog is 93%.

Group of orthologs #909. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 S.tridecemlineatus:151

L0PG38              	100.00%		I3NDE6              	100.00%
Bootstrap support for L0PG38 as seed ortholog is 100%.
Bootstrap support for I3NDE6 as seed ortholog is 100%.

Group of orthologs #910. Best score 150 bits
Score difference with first non-orthologous sequence - P.jiroveci:150 S.tridecemlineatus:150

L0PEQ2              	100.00%		I3M1C2              	100.00%
L0P999              	59.42%		I3MRI6              	16.40%
Bootstrap support for L0PEQ2 as seed ortholog is 100%.
Bootstrap support for I3M1C2 as seed ortholog is 100%.

Group of orthologs #911. Best score 150 bits
Score difference with first non-orthologous sequence - P.jiroveci:150 S.tridecemlineatus:29

L0PG65              	100.00%		I3N703              	100.00%
                    	       		I3N369              	72.86%
                    	       		I3M9Z4              	16.74%
Bootstrap support for L0PG65 as seed ortholog is 100%.
Bootstrap support for I3N703 as seed ortholog is 78%.

Group of orthologs #912. Best score 150 bits
Score difference with first non-orthologous sequence - P.jiroveci:150 S.tridecemlineatus:150

L0P7V4              	100.00%		I3LWH0              	100.00%
Bootstrap support for L0P7V4 as seed ortholog is 100%.
Bootstrap support for I3LWH0 as seed ortholog is 100%.

Group of orthologs #913. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:60 S.tridecemlineatus:33

L0P9Y3              	100.00%		I3M2N2              	100.00%
                    	       		I3M0P5              	42.63%
                    	       		I3M988              	32.67%
Bootstrap support for L0P9Y3 as seed ortholog is 87%.
Bootstrap support for I3M2N2 as seed ortholog is 87%.

Group of orthologs #914. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 S.tridecemlineatus:149

L0PEG0              	100.00%		I3MK59              	100.00%
                    	       		I3N1B4              	100.00%
                    	       		I3N742              	70.73%
Bootstrap support for L0PEG0 as seed ortholog is 100%.
Bootstrap support for I3MK59 as seed ortholog is 100%.
Bootstrap support for I3N1B4 as seed ortholog is 100%.

Group of orthologs #915. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 S.tridecemlineatus:149

L0PD01              	100.00%		I3M3Q5              	100.00%
L0PF42              	100.00%		
Bootstrap support for L0PD01 as seed ortholog is 100%.
Bootstrap support for L0PF42 as seed ortholog is 100%.
Bootstrap support for I3M3Q5 as seed ortholog is 100%.

Group of orthologs #916. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 S.tridecemlineatus:149

L0PEB9              	100.00%		I3MK28              	100.00%
L0PA79              	59.62%		
Bootstrap support for L0PEB9 as seed ortholog is 100%.
Bootstrap support for I3MK28 as seed ortholog is 100%.

Group of orthologs #917. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 S.tridecemlineatus:149

L0P9V3              	100.00%		I3M0B4              	100.00%
Bootstrap support for L0P9V3 as seed ortholog is 100%.
Bootstrap support for I3M0B4 as seed ortholog is 100%.

Group of orthologs #918. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 S.tridecemlineatus:149

L0PEK7              	100.00%		I3M4N7              	100.00%
Bootstrap support for L0PEK7 as seed ortholog is 100%.
Bootstrap support for I3M4N7 as seed ortholog is 100%.

Group of orthologs #919. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 S.tridecemlineatus:149

L0PH83              	100.00%		I3M5T9              	100.00%
Bootstrap support for L0PH83 as seed ortholog is 100%.
Bootstrap support for I3M5T9 as seed ortholog is 100%.

Group of orthologs #920. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 S.tridecemlineatus:149

L0PGP5              	100.00%		I3MNW9              	100.00%
Bootstrap support for L0PGP5 as seed ortholog is 100%.
Bootstrap support for I3MNW9 as seed ortholog is 100%.

Group of orthologs #921. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 S.tridecemlineatus:149

L0P7U6              	100.00%		I3N2P2              	100.00%
Bootstrap support for L0P7U6 as seed ortholog is 100%.
Bootstrap support for I3N2P2 as seed ortholog is 100%.

Group of orthologs #922. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 S.tridecemlineatus:149

L0P6R0              	100.00%		I3N9T9              	100.00%
Bootstrap support for L0P6R0 as seed ortholog is 100%.
Bootstrap support for I3N9T9 as seed ortholog is 100%.

Group of orthologs #923. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 S.tridecemlineatus:148

L0PB34              	100.00%		I3M7A7              	100.00%
                    	       		I3NBT6              	20.50%
                    	       		I3MCM5              	15.53%
Bootstrap support for L0PB34 as seed ortholog is 100%.
Bootstrap support for I3M7A7 as seed ortholog is 100%.

Group of orthologs #924. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 S.tridecemlineatus:148

L0PCX3              	100.00%		I3MBN4              	100.00%
                    	       		I3MF74              	32.19%
Bootstrap support for L0PCX3 as seed ortholog is 100%.
Bootstrap support for I3MBN4 as seed ortholog is 100%.

Group of orthologs #925. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 S.tridecemlineatus:148

L0PDZ3              	100.00%		I3MIR7              	100.00%
                    	       		I3MU22              	38.51%
Bootstrap support for L0PDZ3 as seed ortholog is 100%.
Bootstrap support for I3MIR7 as seed ortholog is 100%.

Group of orthologs #926. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 S.tridecemlineatus:148

L0P9D1              	100.00%		I3MNT8              	100.00%
Bootstrap support for L0P9D1 as seed ortholog is 100%.
Bootstrap support for I3MNT8 as seed ortholog is 100%.

Group of orthologs #927. Best score 147 bits
Score difference with first non-orthologous sequence - P.jiroveci:147 S.tridecemlineatus:147

L0PCC6              	100.00%		I3M3C8              	100.00%
                    	       		I3MRK4              	32.04%
                    	       		I3LWC2              	7.74%
Bootstrap support for L0PCC6 as seed ortholog is 100%.
Bootstrap support for I3M3C8 as seed ortholog is 100%.

Group of orthologs #928. Best score 147 bits
Score difference with first non-orthologous sequence - P.jiroveci:147 S.tridecemlineatus:67

L0P7E9              	100.00%		I3MA90              	100.00%
Bootstrap support for L0P7E9 as seed ortholog is 100%.
Bootstrap support for I3MA90 as seed ortholog is 99%.

Group of orthologs #929. Best score 147 bits
Score difference with first non-orthologous sequence - P.jiroveci:147 S.tridecemlineatus:98

L0PDY2              	100.00%		I3MA96              	100.00%
Bootstrap support for L0PDY2 as seed ortholog is 100%.
Bootstrap support for I3MA96 as seed ortholog is 99%.

Group of orthologs #930. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 S.tridecemlineatus:146

L0P9F5              	100.00%		I3MMZ3              	100.00%
                    	       		I3N4I3              	100.00%
Bootstrap support for L0P9F5 as seed ortholog is 100%.
Bootstrap support for I3MMZ3 as seed ortholog is 100%.
Bootstrap support for I3N4I3 as seed ortholog is 100%.

Group of orthologs #931. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 S.tridecemlineatus:146

L0PDR9              	100.00%		I3NHW0              	100.00%
L0P8I3              	72.56%		
Bootstrap support for L0PDR9 as seed ortholog is 100%.
Bootstrap support for I3NHW0 as seed ortholog is 100%.

Group of orthologs #932. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 S.tridecemlineatus:146

L0P9U2              	100.00%		I3LY55              	100.00%
Bootstrap support for L0P9U2 as seed ortholog is 100%.
Bootstrap support for I3LY55 as seed ortholog is 100%.

Group of orthologs #933. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 S.tridecemlineatus:90

L0P948              	100.00%		I3M143              	100.00%
Bootstrap support for L0P948 as seed ortholog is 100%.
Bootstrap support for I3M143 as seed ortholog is 99%.

Group of orthologs #934. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 S.tridecemlineatus:75

L0PBZ4              	100.00%		I3M2Y9              	100.00%
Bootstrap support for L0PBZ4 as seed ortholog is 100%.
Bootstrap support for I3M2Y9 as seed ortholog is 99%.

Group of orthologs #935. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 S.tridecemlineatus:146

L0P9U0              	100.00%		I3MLA6              	100.00%
Bootstrap support for L0P9U0 as seed ortholog is 100%.
Bootstrap support for I3MLA6 as seed ortholog is 100%.

Group of orthologs #936. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 S.tridecemlineatus:146

L0PFY6              	100.00%		I3MGB3              	100.00%
Bootstrap support for L0PFY6 as seed ortholog is 100%.
Bootstrap support for I3MGB3 as seed ortholog is 100%.

Group of orthologs #937. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 S.tridecemlineatus:104

L0PAB2              	100.00%		I3MVH1              	100.00%
Bootstrap support for L0PAB2 as seed ortholog is 100%.
Bootstrap support for I3MVH1 as seed ortholog is 99%.

Group of orthologs #938. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 S.tridecemlineatus:146

L0PDX2              	100.00%		I3N353              	100.00%
Bootstrap support for L0PDX2 as seed ortholog is 100%.
Bootstrap support for I3N353 as seed ortholog is 100%.

Group of orthologs #939. Best score 145 bits
Score difference with first non-orthologous sequence - P.jiroveci:145 S.tridecemlineatus:145

L0PCA3              	100.00%		I3MFU9              	100.00%
                    	       		I3MJ81              	19.05%
                    	       		I3N6G2              	13.93%
Bootstrap support for L0PCA3 as seed ortholog is 100%.
Bootstrap support for I3MFU9 as seed ortholog is 100%.

Group of orthologs #940. Best score 145 bits
Score difference with first non-orthologous sequence - P.jiroveci:145 S.tridecemlineatus:96

L0P7A4              	100.00%		I3MIJ4              	100.00%
Bootstrap support for L0P7A4 as seed ortholog is 100%.
Bootstrap support for I3MIJ4 as seed ortholog is 99%.

Group of orthologs #941. Best score 145 bits
Score difference with first non-orthologous sequence - P.jiroveci:145 S.tridecemlineatus:145

L0PEZ4              	100.00%		I3MJU4              	100.00%
Bootstrap support for L0PEZ4 as seed ortholog is 100%.
Bootstrap support for I3MJU4 as seed ortholog is 100%.

Group of orthologs #942. Best score 145 bits
Score difference with first non-orthologous sequence - P.jiroveci:145 S.tridecemlineatus:145

L0PFP4              	100.00%		I3MWV7              	100.00%
Bootstrap support for L0PFP4 as seed ortholog is 100%.
Bootstrap support for I3MWV7 as seed ortholog is 100%.

Group of orthologs #943. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 S.tridecemlineatus:144

L0PCQ2              	100.00%		I3MGP8              	100.00%
Bootstrap support for L0PCQ2 as seed ortholog is 100%.
Bootstrap support for I3MGP8 as seed ortholog is 100%.

Group of orthologs #944. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 S.tridecemlineatus:144

L0PFR0              	100.00%		I3MDQ6              	100.00%
Bootstrap support for L0PFR0 as seed ortholog is 100%.
Bootstrap support for I3MDQ6 as seed ortholog is 100%.

Group of orthologs #945. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 S.tridecemlineatus:144

L0PFY9              	100.00%		I3N877              	100.00%
Bootstrap support for L0PFY9 as seed ortholog is 100%.
Bootstrap support for I3N877 as seed ortholog is 100%.

Group of orthologs #946. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 S.tridecemlineatus:144

L0PFD5              	100.00%		I3NBB5              	100.00%
Bootstrap support for L0PFD5 as seed ortholog is 100%.
Bootstrap support for I3NBB5 as seed ortholog is 100%.

Group of orthologs #947. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 S.tridecemlineatus:94

L0PEV3              	100.00%		I3NF36              	100.00%
Bootstrap support for L0PEV3 as seed ortholog is 100%.
Bootstrap support for I3NF36 as seed ortholog is 99%.

Group of orthologs #948. Best score 143 bits
Score difference with first non-orthologous sequence - P.jiroveci:143 S.tridecemlineatus:143

L0P778              	100.00%		I3M1F0              	100.00%
                    	       		I3N4W8              	100.00%
                    	       		I3NBA4              	60.38%
                    	       		I3N7M4              	57.74%
Bootstrap support for L0P778 as seed ortholog is 100%.
Bootstrap support for I3M1F0 as seed ortholog is 100%.
Bootstrap support for I3N4W8 as seed ortholog is 100%.

Group of orthologs #949. Best score 143 bits
Score difference with first non-orthologous sequence - P.jiroveci:143 S.tridecemlineatus:25

L0P963              	100.00%		I3NG45              	100.00%
                    	       		I3MII1              	44.26%
Bootstrap support for L0P963 as seed ortholog is 100%.
Bootstrap support for I3NG45 as seed ortholog is 74%.
Alternative seed ortholog is I3MC96 (25 bits away from this cluster)

Group of orthologs #950. Best score 143 bits
Score difference with first non-orthologous sequence - P.jiroveci:143 S.tridecemlineatus:143

L0PA35              	100.00%		I3MRT0              	100.00%
Bootstrap support for L0PA35 as seed ortholog is 100%.
Bootstrap support for I3MRT0 as seed ortholog is 100%.

Group of orthologs #951. Best score 143 bits
Score difference with first non-orthologous sequence - P.jiroveci:143 S.tridecemlineatus:61

L0PDN5              	100.00%		I3N6Z7              	100.00%
Bootstrap support for L0PDN5 as seed ortholog is 100%.
Bootstrap support for I3N6Z7 as seed ortholog is 95%.

Group of orthologs #952. Best score 143 bits
Score difference with first non-orthologous sequence - P.jiroveci:143 S.tridecemlineatus:143

L0PCP9              	100.00%		I3NBN6              	100.00%
Bootstrap support for L0PCP9 as seed ortholog is 100%.
Bootstrap support for I3NBN6 as seed ortholog is 100%.

Group of orthologs #953. Best score 142 bits
Score difference with first non-orthologous sequence - P.jiroveci:142 S.tridecemlineatus:142

L0PA83              	100.00%		I3NED7              	100.00%
                    	       		I3MNB8              	94.05%
                    	       		I3N7Q4              	38.10%
Bootstrap support for L0PA83 as seed ortholog is 100%.
Bootstrap support for I3NED7 as seed ortholog is 100%.

Group of orthologs #954. Best score 142 bits
Score difference with first non-orthologous sequence - P.jiroveci:142 S.tridecemlineatus:142

L0P8G7              	100.00%		I3MGQ9              	100.00%
Bootstrap support for L0P8G7 as seed ortholog is 100%.
Bootstrap support for I3MGQ9 as seed ortholog is 100%.

Group of orthologs #955. Best score 142 bits
Score difference with first non-orthologous sequence - P.jiroveci:142 S.tridecemlineatus:142

L0P9E5              	100.00%		I3NC76              	100.00%
Bootstrap support for L0P9E5 as seed ortholog is 100%.
Bootstrap support for I3NC76 as seed ortholog is 100%.

Group of orthologs #956. Best score 141 bits
Score difference with first non-orthologous sequence - P.jiroveci:141 S.tridecemlineatus:141

L0P7K4              	100.00%		I3M9J9              	100.00%
L0P859              	81.84%		
Bootstrap support for L0P7K4 as seed ortholog is 100%.
Bootstrap support for I3M9J9 as seed ortholog is 100%.

Group of orthologs #957. Best score 141 bits
Score difference with first non-orthologous sequence - P.jiroveci:141 S.tridecemlineatus:141

L0PEB8              	100.00%		I3MKN5              	100.00%
                    	       		I3N068              	16.63%
Bootstrap support for L0PEB8 as seed ortholog is 100%.
Bootstrap support for I3MKN5 as seed ortholog is 100%.

Group of orthologs #958. Best score 141 bits
Score difference with first non-orthologous sequence - P.jiroveci:141 S.tridecemlineatus:141

L0PE36              	100.00%		I3MUQ6              	100.00%
                    	       		I3NE41              	25.69%
Bootstrap support for L0PE36 as seed ortholog is 100%.
Bootstrap support for I3MUQ6 as seed ortholog is 100%.

Group of orthologs #959. Best score 141 bits
Score difference with first non-orthologous sequence - P.jiroveci:141 S.tridecemlineatus:141

L0PCN2              	100.00%		I3LWL5              	100.00%
Bootstrap support for L0PCN2 as seed ortholog is 100%.
Bootstrap support for I3LWL5 as seed ortholog is 100%.

Group of orthologs #960. Best score 141 bits
Score difference with first non-orthologous sequence - P.jiroveci:141 S.tridecemlineatus:141

L0P733              	100.00%		I3NEQ3              	100.00%
Bootstrap support for L0P733 as seed ortholog is 100%.
Bootstrap support for I3NEQ3 as seed ortholog is 100%.

Group of orthologs #961. Best score 140 bits
Score difference with first non-orthologous sequence - P.jiroveci:140 S.tridecemlineatus:140

L0PAA1              	100.00%		I3MCS9              	100.00%
Bootstrap support for L0PAA1 as seed ortholog is 100%.
Bootstrap support for I3MCS9 as seed ortholog is 100%.

Group of orthologs #962. Best score 140 bits
Score difference with first non-orthologous sequence - P.jiroveci:140 S.tridecemlineatus:140

L0PAN5              	100.00%		I3MSY7              	100.00%
Bootstrap support for L0PAN5 as seed ortholog is 100%.
Bootstrap support for I3MSY7 as seed ortholog is 100%.

Group of orthologs #963. Best score 140 bits
Score difference with first non-orthologous sequence - P.jiroveci:140 S.tridecemlineatus:140

L0P9B3              	100.00%		I3N387              	100.00%
Bootstrap support for L0P9B3 as seed ortholog is 100%.
Bootstrap support for I3N387 as seed ortholog is 100%.

Group of orthologs #964. Best score 140 bits
Score difference with first non-orthologous sequence - P.jiroveci:140 S.tridecemlineatus:140

L0PC24              	100.00%		I3ND86              	100.00%
Bootstrap support for L0PC24 as seed ortholog is 100%.
Bootstrap support for I3ND86 as seed ortholog is 100%.

Group of orthologs #965. Best score 139 bits
Score difference with first non-orthologous sequence - P.jiroveci:139 S.tridecemlineatus:139

L0PBG3              	100.00%		I3M379              	100.00%
Bootstrap support for L0PBG3 as seed ortholog is 100%.
Bootstrap support for I3M379 as seed ortholog is 100%.

Group of orthologs #966. Best score 139 bits
Score difference with first non-orthologous sequence - P.jiroveci:139 S.tridecemlineatus:139

L0PA48              	100.00%		I3M996              	100.00%
Bootstrap support for L0PA48 as seed ortholog is 100%.
Bootstrap support for I3M996 as seed ortholog is 100%.

Group of orthologs #967. Best score 139 bits
Score difference with first non-orthologous sequence - P.jiroveci:139 S.tridecemlineatus:139

L0PCU6              	100.00%		I3M7H2              	100.00%
Bootstrap support for L0PCU6 as seed ortholog is 100%.
Bootstrap support for I3M7H2 as seed ortholog is 100%.

Group of orthologs #968. Best score 138 bits
Score difference with first non-orthologous sequence - P.jiroveci:138 S.tridecemlineatus:138

L0PFS7              	100.00%		I3M1U2              	100.00%
                    	       		I3MAA6              	27.78%
Bootstrap support for L0PFS7 as seed ortholog is 100%.
Bootstrap support for I3M1U2 as seed ortholog is 100%.

Group of orthologs #969. Best score 138 bits
Score difference with first non-orthologous sequence - P.jiroveci:138 S.tridecemlineatus:138

L0PAW7              	100.00%		I3LWP2              	100.00%
Bootstrap support for L0PAW7 as seed ortholog is 100%.
Bootstrap support for I3LWP2 as seed ortholog is 100%.

Group of orthologs #970. Best score 138 bits
Score difference with first non-orthologous sequence - P.jiroveci:138 S.tridecemlineatus:86

L0P8I2              	100.00%		I3M5E3              	100.00%
Bootstrap support for L0P8I2 as seed ortholog is 100%.
Bootstrap support for I3M5E3 as seed ortholog is 99%.

Group of orthologs #971. Best score 138 bits
Score difference with first non-orthologous sequence - P.jiroveci:138 S.tridecemlineatus:138

L0PCC8              	100.00%		I3MAC3              	100.00%
Bootstrap support for L0PCC8 as seed ortholog is 100%.
Bootstrap support for I3MAC3 as seed ortholog is 100%.

Group of orthologs #972. Best score 138 bits
Score difference with first non-orthologous sequence - P.jiroveci:138 S.tridecemlineatus:138

L0PDW9              	100.00%		I3NCJ8              	100.00%
Bootstrap support for L0PDW9 as seed ortholog is 100%.
Bootstrap support for I3NCJ8 as seed ortholog is 100%.

Group of orthologs #973. Best score 137 bits
Score difference with first non-orthologous sequence - P.jiroveci:137 S.tridecemlineatus:43

L0P9S9              	100.00%		I3MF63              	100.00%
L0PDT3              	43.44%		I3MRB0              	49.21%
                    	       		I3MR33              	39.41%
                    	       		I3LXU6              	30.77%
                    	       		I3MRA8              	27.61%
                    	       		I3MTR2              	12.86%
Bootstrap support for L0P9S9 as seed ortholog is 100%.
Bootstrap support for I3MF63 as seed ortholog is 84%.

Group of orthologs #974. Best score 137 bits
Score difference with first non-orthologous sequence - P.jiroveci:137 S.tridecemlineatus:21

L0P8Q5              	100.00%		I3M0K5              	100.00%
Bootstrap support for L0P8Q5 as seed ortholog is 100%.
Bootstrap support for I3M0K5 as seed ortholog is 70%.
Alternative seed ortholog is I3N8V5 (21 bits away from this cluster)

Group of orthologs #975. Best score 137 bits
Score difference with first non-orthologous sequence - P.jiroveci:137 S.tridecemlineatus:42

L0PDJ7              	100.00%		I3M4F8              	100.00%
Bootstrap support for L0PDJ7 as seed ortholog is 100%.
Bootstrap support for I3M4F8 as seed ortholog is 96%.

Group of orthologs #976. Best score 136 bits
Score difference with first non-orthologous sequence - P.jiroveci:136 S.tridecemlineatus:136

L0PF45              	100.00%		I3M813              	100.00%
Bootstrap support for L0PF45 as seed ortholog is 100%.
Bootstrap support for I3M813 as seed ortholog is 100%.

Group of orthologs #977. Best score 136 bits
Score difference with first non-orthologous sequence - P.jiroveci:136 S.tridecemlineatus:136

L0PEG7              	100.00%		I3MSS6              	100.00%
Bootstrap support for L0PEG7 as seed ortholog is 100%.
Bootstrap support for I3MSS6 as seed ortholog is 100%.

Group of orthologs #978. Best score 136 bits
Score difference with first non-orthologous sequence - P.jiroveci:136 S.tridecemlineatus:136

L0P7A1              	100.00%		I3NE29              	100.00%
Bootstrap support for L0P7A1 as seed ortholog is 100%.
Bootstrap support for I3NE29 as seed ortholog is 100%.

Group of orthologs #979. Best score 134 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 S.tridecemlineatus:134

L0P8Z8              	100.00%		I3M4T3              	100.00%
L0PFN6              	78.74%		
Bootstrap support for L0P8Z8 as seed ortholog is 100%.
Bootstrap support for I3M4T3 as seed ortholog is 100%.

Group of orthologs #980. Best score 134 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 S.tridecemlineatus:52

L0PE51              	100.00%		I3LWG2              	100.00%
Bootstrap support for L0PE51 as seed ortholog is 100%.
Bootstrap support for I3LWG2 as seed ortholog is 97%.

Group of orthologs #981. Best score 134 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 S.tridecemlineatus:134

L0PD77              	100.00%		I3MC61              	100.00%
Bootstrap support for L0PD77 as seed ortholog is 100%.
Bootstrap support for I3MC61 as seed ortholog is 100%.

Group of orthologs #982. Best score 134 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 S.tridecemlineatus:134

L0P8P0              	100.00%		I3MV76              	100.00%
Bootstrap support for L0P8P0 as seed ortholog is 100%.
Bootstrap support for I3MV76 as seed ortholog is 100%.

Group of orthologs #983. Best score 134 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 S.tridecemlineatus:134

L0PCX8              	100.00%		I3NFG6              	100.00%
Bootstrap support for L0PCX8 as seed ortholog is 100%.
Bootstrap support for I3NFG6 as seed ortholog is 100%.

Group of orthologs #984. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 S.tridecemlineatus:133

L0PFZ7              	100.00%		I3N8U2              	100.00%
                    	       		I3M4Z2              	53.72%
Bootstrap support for L0PFZ7 as seed ortholog is 100%.
Bootstrap support for I3N8U2 as seed ortholog is 100%.

Group of orthologs #985. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 S.tridecemlineatus:133

L0P8P5              	100.00%		I3MIB9              	100.00%
Bootstrap support for L0P8P5 as seed ortholog is 100%.
Bootstrap support for I3MIB9 as seed ortholog is 100%.

Group of orthologs #986. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 S.tridecemlineatus:70

L0P8G0              	100.00%		I3MNF4              	100.00%
Bootstrap support for L0P8G0 as seed ortholog is 99%.
Bootstrap support for I3MNF4 as seed ortholog is 99%.

Group of orthologs #987. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 S.tridecemlineatus:133

L0PCZ5              	100.00%		I3MSM3              	100.00%
Bootstrap support for L0PCZ5 as seed ortholog is 100%.
Bootstrap support for I3MSM3 as seed ortholog is 100%.

Group of orthologs #988. Best score 132 bits
Score difference with first non-orthologous sequence - P.jiroveci:132 S.tridecemlineatus:132

L0P938              	100.00%		I3MNC9              	100.00%
                    	       		I3NAD9              	86.98%
                    	       		I3MYD7              	56.28%
Bootstrap support for L0P938 as seed ortholog is 100%.
Bootstrap support for I3MNC9 as seed ortholog is 100%.

Group of orthologs #989. Best score 132 bits
Score difference with first non-orthologous sequence - P.jiroveci:132 S.tridecemlineatus:132

L0PC89              	100.00%		I3NEX4              	100.00%
                    	       		I3MBK3              	26.47%
                    	       		I3N580              	7.19%
Bootstrap support for L0PC89 as seed ortholog is 100%.
Bootstrap support for I3NEX4 as seed ortholog is 100%.

Group of orthologs #990. Best score 132 bits
Score difference with first non-orthologous sequence - P.jiroveci:132 S.tridecemlineatus:132

L0PEI9              	100.00%		I3MKY6              	100.00%
                    	       		I3NA92              	66.88%
Bootstrap support for L0PEI9 as seed ortholog is 100%.
Bootstrap support for I3MKY6 as seed ortholog is 100%.

Group of orthologs #991. Best score 132 bits
Score difference with first non-orthologous sequence - P.jiroveci:132 S.tridecemlineatus:132

L0PEV6              	100.00%		I3M0D0              	100.00%
Bootstrap support for L0PEV6 as seed ortholog is 100%.
Bootstrap support for I3M0D0 as seed ortholog is 100%.

Group of orthologs #992. Best score 132 bits
Score difference with first non-orthologous sequence - P.jiroveci:132 S.tridecemlineatus:132

L0PG28              	100.00%		I3N844              	100.00%
Bootstrap support for L0PG28 as seed ortholog is 100%.
Bootstrap support for I3N844 as seed ortholog is 100%.

Group of orthologs #993. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 S.tridecemlineatus:131

L0PA43              	100.00%		I3N4F8              	100.00%
                    	       		I3N0J8              	32.66%
Bootstrap support for L0PA43 as seed ortholog is 100%.
Bootstrap support for I3N4F8 as seed ortholog is 100%.

Group of orthologs #994. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 S.tridecemlineatus:131

L0PF62              	100.00%		I3M2R9              	100.00%
Bootstrap support for L0PF62 as seed ortholog is 100%.
Bootstrap support for I3M2R9 as seed ortholog is 100%.

Group of orthologs #995. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 S.tridecemlineatus:131

L0PBR1              	100.00%		I3MKZ5              	100.00%
Bootstrap support for L0PBR1 as seed ortholog is 100%.
Bootstrap support for I3MKZ5 as seed ortholog is 100%.

Group of orthologs #996. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 S.tridecemlineatus:131

L0PFH1              	100.00%		I3MQC8              	100.00%
Bootstrap support for L0PFH1 as seed ortholog is 100%.
Bootstrap support for I3MQC8 as seed ortholog is 100%.

Group of orthologs #997. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 S.tridecemlineatus:131

L0PAT4              	100.00%		I3N5G2              	100.00%
Bootstrap support for L0PAT4 as seed ortholog is 100%.
Bootstrap support for I3N5G2 as seed ortholog is 100%.

Group of orthologs #998. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 S.tridecemlineatus:131

L0P7Y4              	100.00%		I3NA29              	100.00%
Bootstrap support for L0P7Y4 as seed ortholog is 100%.
Bootstrap support for I3NA29 as seed ortholog is 100%.

Group of orthologs #999. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 S.tridecemlineatus:131

L0PAZ1              	100.00%		I3ND84              	100.00%
Bootstrap support for L0PAZ1 as seed ortholog is 100%.
Bootstrap support for I3ND84 as seed ortholog is 100%.

Group of orthologs #1000. Best score 130 bits
Score difference with first non-orthologous sequence - P.jiroveci:130 S.tridecemlineatus:130

L0P8K4              	100.00%		I3ME71              	100.00%
                    	       		I3N9L5              	48.67%
                    	       		I3MP72              	11.67%
Bootstrap support for L0P8K4 as seed ortholog is 100%.
Bootstrap support for I3ME71 as seed ortholog is 100%.

Group of orthologs #1001. Best score 130 bits
Score difference with first non-orthologous sequence - P.jiroveci:130 S.tridecemlineatus:130

L0PGC9              	100.00%		I3M7B0              	100.00%
                    	       		I3LXR5              	83.15%
                    	       		I3LWA9              	80.98%
Bootstrap support for L0PGC9 as seed ortholog is 100%.
Bootstrap support for I3M7B0 as seed ortholog is 100%.

Group of orthologs #1002. Best score 130 bits
Score difference with first non-orthologous sequence - P.jiroveci:130 S.tridecemlineatus:77

L0PFW7              	100.00%		I3N1G7              	100.00%
                    	       		I3MWD9              	9.43%
Bootstrap support for L0PFW7 as seed ortholog is 100%.
Bootstrap support for I3N1G7 as seed ortholog is 99%.

Group of orthologs #1003. Best score 130 bits
Score difference with first non-orthologous sequence - P.jiroveci:130 S.tridecemlineatus:130

L0PDE3              	100.00%		I3M8K3              	100.00%
Bootstrap support for L0PDE3 as seed ortholog is 100%.
Bootstrap support for I3M8K3 as seed ortholog is 100%.

Group of orthologs #1004. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 S.tridecemlineatus:72

L0PCT4              	100.00%		I3M8S1              	100.00%
                    	       		I3M8Q7              	60.17%
                    	       		I3M8P6              	54.81%
                    	       		I3MCG0              	43.97%
Bootstrap support for L0PCT4 as seed ortholog is 100%.
Bootstrap support for I3M8S1 as seed ortholog is 94%.

Group of orthologs #1005. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 S.tridecemlineatus:129

L0P9Q9              	100.00%		I3M3H3              	100.00%
                    	       		I3MEF6              	10.13%
Bootstrap support for L0P9Q9 as seed ortholog is 100%.
Bootstrap support for I3M3H3 as seed ortholog is 100%.

Group of orthologs #1006. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 S.tridecemlineatus:61

L0PBU1              	100.00%		I3M9D9              	100.00%
                    	       		I3MWD1              	71.29%
Bootstrap support for L0PBU1 as seed ortholog is 100%.
Bootstrap support for I3M9D9 as seed ortholog is 99%.

Group of orthologs #1007. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 S.tridecemlineatus:129

L0PDZ4              	100.00%		I3M7Z1              	100.00%
                    	       		I3NDG5              	62.80%
Bootstrap support for L0PDZ4 as seed ortholog is 100%.
Bootstrap support for I3M7Z1 as seed ortholog is 100%.

Group of orthologs #1008. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 S.tridecemlineatus:129

L0P9M3              	100.00%		I3MDH1              	100.00%
                    	       		I3N3F0              	88.04%
Bootstrap support for L0P9M3 as seed ortholog is 100%.
Bootstrap support for I3MDH1 as seed ortholog is 100%.

Group of orthologs #1009. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 S.tridecemlineatus:129

L0P800              	100.00%		I3NEF6              	100.00%
                    	       		I3MME7              	47.49%
Bootstrap support for L0P800 as seed ortholog is 100%.
Bootstrap support for I3NEF6 as seed ortholog is 100%.

Group of orthologs #1010. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 S.tridecemlineatus:129

L0PE48              	100.00%		I3M148              	100.00%
Bootstrap support for L0PE48 as seed ortholog is 100%.
Bootstrap support for I3M148 as seed ortholog is 100%.

Group of orthologs #1011. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 S.tridecemlineatus:129

L0P6Q5              	100.00%		I3MBY8              	100.00%
Bootstrap support for L0P6Q5 as seed ortholog is 100%.
Bootstrap support for I3MBY8 as seed ortholog is 100%.

Group of orthologs #1012. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 S.tridecemlineatus:129

L0PBH3              	100.00%		I3MMZ6              	100.00%
Bootstrap support for L0PBH3 as seed ortholog is 100%.
Bootstrap support for I3MMZ6 as seed ortholog is 100%.

Group of orthologs #1013. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 S.tridecemlineatus:129

L0P8W1              	100.00%		I3MRM3              	100.00%
Bootstrap support for L0P8W1 as seed ortholog is 100%.
Bootstrap support for I3MRM3 as seed ortholog is 100%.

Group of orthologs #1014. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 S.tridecemlineatus:81

L0PCC0              	100.00%		I3MUG0              	100.00%
Bootstrap support for L0PCC0 as seed ortholog is 100%.
Bootstrap support for I3MUG0 as seed ortholog is 99%.

Group of orthologs #1015. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 S.tridecemlineatus:85

L0PG59              	100.00%		I3NEA3              	100.00%
Bootstrap support for L0PG59 as seed ortholog is 100%.
Bootstrap support for I3NEA3 as seed ortholog is 99%.

Group of orthologs #1016. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 S.tridecemlineatus:128

L0P8G3              	100.00%		I3M9W9              	100.00%
                    	       		I3MUF3              	40.18%
Bootstrap support for L0P8G3 as seed ortholog is 100%.
Bootstrap support for I3M9W9 as seed ortholog is 100%.

Group of orthologs #1017. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 S.tridecemlineatus:128

L0P940              	100.00%		I3MGB5              	100.00%
                    	       		I3N350              	52.80%
Bootstrap support for L0P940 as seed ortholog is 100%.
Bootstrap support for I3MGB5 as seed ortholog is 100%.

Group of orthologs #1018. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 S.tridecemlineatus:128

L0PG87              	100.00%		I3MZT8              	100.00%
                    	       		I3NCQ7              	100.00%
Bootstrap support for L0PG87 as seed ortholog is 100%.
Bootstrap support for I3MZT8 as seed ortholog is 100%.
Bootstrap support for I3NCQ7 as seed ortholog is 100%.

Group of orthologs #1019. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 S.tridecemlineatus:128

L0PF37              	100.00%		I3MIJ5              	100.00%
Bootstrap support for L0PF37 as seed ortholog is 100%.
Bootstrap support for I3MIJ5 as seed ortholog is 100%.

Group of orthologs #1020. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 S.tridecemlineatus:61

L0PA97              	100.00%		I3MTU2              	100.00%
Bootstrap support for L0PA97 as seed ortholog is 100%.
Bootstrap support for I3MTU2 as seed ortholog is 99%.

Group of orthologs #1021. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 S.tridecemlineatus:128

L0PE02              	100.00%		I3NDR5              	100.00%
Bootstrap support for L0PE02 as seed ortholog is 100%.
Bootstrap support for I3NDR5 as seed ortholog is 100%.

Group of orthologs #1022. Best score 127 bits
Score difference with first non-orthologous sequence - P.jiroveci:127 S.tridecemlineatus:127

L0PCK2              	100.00%		I3MGE7              	100.00%
                    	       		I3NFC3              	20.11%
Bootstrap support for L0PCK2 as seed ortholog is 100%.
Bootstrap support for I3MGE7 as seed ortholog is 100%.

Group of orthologs #1023. Best score 127 bits
Score difference with first non-orthologous sequence - P.jiroveci:127 S.tridecemlineatus:127

L0PDJ4              	100.00%		I3M2Q8              	100.00%
Bootstrap support for L0PDJ4 as seed ortholog is 100%.
Bootstrap support for I3M2Q8 as seed ortholog is 100%.

Group of orthologs #1024. Best score 127 bits
Score difference with first non-orthologous sequence - P.jiroveci:127 S.tridecemlineatus:127

L0PD60              	100.00%		I3M6F8              	100.00%
Bootstrap support for L0PD60 as seed ortholog is 100%.
Bootstrap support for I3M6F8 as seed ortholog is 100%.

Group of orthologs #1025. Best score 127 bits
Score difference with first non-orthologous sequence - P.jiroveci:127 S.tridecemlineatus:127

L0PEK8              	100.00%		I3MM30              	100.00%
Bootstrap support for L0PEK8 as seed ortholog is 100%.
Bootstrap support for I3MM30 as seed ortholog is 100%.

Group of orthologs #1026. Best score 126 bits
Score difference with first non-orthologous sequence - P.jiroveci:126 S.tridecemlineatus:59

L0PF38              	100.00%		I3MPZ6              	100.00%
                    	       		I3N110              	90.52%
Bootstrap support for L0PF38 as seed ortholog is 100%.
Bootstrap support for I3MPZ6 as seed ortholog is 98%.

Group of orthologs #1027. Best score 126 bits
Score difference with first non-orthologous sequence - P.jiroveci:126 S.tridecemlineatus:126

L0PCB4              	100.00%		I3LXJ1              	100.00%
Bootstrap support for L0PCB4 as seed ortholog is 100%.
Bootstrap support for I3LXJ1 as seed ortholog is 100%.

Group of orthologs #1028. Best score 126 bits
Score difference with first non-orthologous sequence - P.jiroveci:126 S.tridecemlineatus:126

L0PEV4              	100.00%		I3MAG8              	100.00%
Bootstrap support for L0PEV4 as seed ortholog is 100%.
Bootstrap support for I3MAG8 as seed ortholog is 100%.

Group of orthologs #1029. Best score 126 bits
Score difference with first non-orthologous sequence - P.jiroveci:126 S.tridecemlineatus:81

L0P9L0              	100.00%		I3MUB5              	100.00%
Bootstrap support for L0P9L0 as seed ortholog is 100%.
Bootstrap support for I3MUB5 as seed ortholog is 99%.

Group of orthologs #1030. Best score 126 bits
Score difference with first non-orthologous sequence - P.jiroveci:126 S.tridecemlineatus:126

L0P8A3              	100.00%		I3N3A7              	100.00%
Bootstrap support for L0P8A3 as seed ortholog is 100%.
Bootstrap support for I3N3A7 as seed ortholog is 100%.

Group of orthologs #1031. Best score 125 bits
Score difference with first non-orthologous sequence - P.jiroveci:125 S.tridecemlineatus:125

L0PF36              	100.00%		I3MDG4              	100.00%
                    	       		I3LX50              	51.33%
Bootstrap support for L0PF36 as seed ortholog is 100%.
Bootstrap support for I3MDG4 as seed ortholog is 100%.

Group of orthologs #1032. Best score 125 bits
Score difference with first non-orthologous sequence - P.jiroveci:125 S.tridecemlineatus:125

L0PEP9              	100.00%		I3MIN8              	100.00%
                    	       		I3M0Y7              	88.79%
Bootstrap support for L0PEP9 as seed ortholog is 100%.
Bootstrap support for I3MIN8 as seed ortholog is 100%.

Group of orthologs #1033. Best score 125 bits
Score difference with first non-orthologous sequence - P.jiroveci:125 S.tridecemlineatus:125

L0PBQ0              	100.00%		I3MHF4              	100.00%
Bootstrap support for L0PBQ0 as seed ortholog is 100%.
Bootstrap support for I3MHF4 as seed ortholog is 100%.

Group of orthologs #1034. Best score 125 bits
Score difference with first non-orthologous sequence - P.jiroveci:125 S.tridecemlineatus:125

L0P9F2              	100.00%		I3MTS5              	100.00%
Bootstrap support for L0P9F2 as seed ortholog is 100%.
Bootstrap support for I3MTS5 as seed ortholog is 100%.

Group of orthologs #1035. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 S.tridecemlineatus:124

L0P816              	100.00%		I3MIF3              	100.00%
                    	       		I3LXU4              	42.11%
Bootstrap support for L0P816 as seed ortholog is 100%.
Bootstrap support for I3MIF3 as seed ortholog is 100%.

Group of orthologs #1036. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 S.tridecemlineatus:124

L0PDN8              	100.00%		I3MGH5              	100.00%
                    	       		I3MIR5              	6.09%
Bootstrap support for L0PDN8 as seed ortholog is 100%.
Bootstrap support for I3MGH5 as seed ortholog is 100%.

Group of orthologs #1037. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 S.tridecemlineatus:30

L0PDL7              	100.00%		I3MZR1              	100.00%
                    	       		I3NE98              	17.99%
Bootstrap support for L0PDL7 as seed ortholog is 100%.
Bootstrap support for I3MZR1 as seed ortholog is 98%.

Group of orthologs #1038. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 S.tridecemlineatus:67

L0PBU7              	100.00%		I3N3S5              	100.00%
                    	       		I3MPN5              	46.12%
Bootstrap support for L0PBU7 as seed ortholog is 100%.
Bootstrap support for I3N3S5 as seed ortholog is 99%.

Group of orthologs #1039. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 S.tridecemlineatus:124

L0PG46              	100.00%		I3LWY5              	100.00%
Bootstrap support for L0PG46 as seed ortholog is 100%.
Bootstrap support for I3LWY5 as seed ortholog is 100%.

Group of orthologs #1040. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 S.tridecemlineatus:124

L0PFP3              	100.00%		I3LZM4              	100.00%
Bootstrap support for L0PFP3 as seed ortholog is 100%.
Bootstrap support for I3LZM4 as seed ortholog is 100%.

Group of orthologs #1041. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 S.tridecemlineatus:124

L0PFZ3              	100.00%		I3M5T2              	100.00%
Bootstrap support for L0PFZ3 as seed ortholog is 100%.
Bootstrap support for I3M5T2 as seed ortholog is 100%.

Group of orthologs #1042. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 S.tridecemlineatus:124

L0P7N9              	100.00%		I3MPN9              	100.00%
Bootstrap support for L0P7N9 as seed ortholog is 100%.
Bootstrap support for I3MPN9 as seed ortholog is 100%.

Group of orthologs #1043. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 S.tridecemlineatus:124

L0PCX0              	100.00%		I3MZP8              	100.00%
Bootstrap support for L0PCX0 as seed ortholog is 100%.
Bootstrap support for I3MZP8 as seed ortholog is 100%.

Group of orthologs #1044. Best score 123 bits
Score difference with first non-orthologous sequence - P.jiroveci:123 S.tridecemlineatus:123

L0P7Q1              	100.00%		I3LZF5              	100.00%
                    	       		I3M280              	61.92%
                    	       		I3M971              	11.46%
                    	       		I3LY32              	8.45%
                    	       		I3NA57              	7.58%
                    	       		I3N532              	6.89%
Bootstrap support for L0P7Q1 as seed ortholog is 100%.
Bootstrap support for I3LZF5 as seed ortholog is 100%.

Group of orthologs #1045. Best score 123 bits
Score difference with first non-orthologous sequence - P.jiroveci:123 S.tridecemlineatus:123

L0PAM9              	100.00%		I3N4Y6              	100.00%
                    	       		I3MQL7              	44.59%
                    	       		I3MVV8              	20.18%
Bootstrap support for L0PAM9 as seed ortholog is 100%.
Bootstrap support for I3N4Y6 as seed ortholog is 100%.

Group of orthologs #1046. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 S.tridecemlineatus:122

L0P9B0              	100.00%		I3MSC9              	100.00%
                    	       		I3NF83              	37.24%
Bootstrap support for L0P9B0 as seed ortholog is 100%.
Bootstrap support for I3MSC9 as seed ortholog is 100%.

Group of orthologs #1047. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 S.tridecemlineatus:55

L0PE76              	100.00%		I3NGS7              	100.00%
                    	       		I3MSZ0              	43.90%
Bootstrap support for L0PE76 as seed ortholog is 100%.
Bootstrap support for I3NGS7 as seed ortholog is 97%.

Group of orthologs #1048. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 S.tridecemlineatus:122

L0PG78              	100.00%		I3M5K4              	100.00%
Bootstrap support for L0PG78 as seed ortholog is 100%.
Bootstrap support for I3M5K4 as seed ortholog is 100%.

Group of orthologs #1049. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 S.tridecemlineatus:122

L0P9M6              	100.00%		I3MR69              	100.00%
Bootstrap support for L0P9M6 as seed ortholog is 100%.
Bootstrap support for I3MR69 as seed ortholog is 100%.

Group of orthologs #1050. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 S.tridecemlineatus:122

L0PFD0              	100.00%		I3MLP3              	100.00%
Bootstrap support for L0PFD0 as seed ortholog is 100%.
Bootstrap support for I3MLP3 as seed ortholog is 100%.

Group of orthologs #1051. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 S.tridecemlineatus:122

L0PIR4              	100.00%		I3MK00              	100.00%
Bootstrap support for L0PIR4 as seed ortholog is 100%.
Bootstrap support for I3MK00 as seed ortholog is 100%.

Group of orthologs #1052. Best score 121 bits
Score difference with first non-orthologous sequence - P.jiroveci:121 S.tridecemlineatus:121

L0P935              	100.00%		I3M4T5              	100.00%
Bootstrap support for L0P935 as seed ortholog is 100%.
Bootstrap support for I3M4T5 as seed ortholog is 100%.

Group of orthologs #1053. Best score 121 bits
Score difference with first non-orthologous sequence - P.jiroveci:121 S.tridecemlineatus:121

L0PC08              	100.00%		I3MH92              	100.00%
Bootstrap support for L0PC08 as seed ortholog is 100%.
Bootstrap support for I3MH92 as seed ortholog is 100%.

Group of orthologs #1054. Best score 121 bits
Score difference with first non-orthologous sequence - P.jiroveci:121 S.tridecemlineatus:76

L0P9A1              	100.00%		I3MKG5              	100.00%
Bootstrap support for L0P9A1 as seed ortholog is 100%.
Bootstrap support for I3MKG5 as seed ortholog is 100%.

Group of orthologs #1055. Best score 121 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 S.tridecemlineatus:121

L0PGN8              	100.00%		I3N1X4              	100.00%
Bootstrap support for L0PGN8 as seed ortholog is 95%.
Bootstrap support for I3N1X4 as seed ortholog is 100%.

Group of orthologs #1056. Best score 121 bits
Score difference with first non-orthologous sequence - P.jiroveci:121 S.tridecemlineatus:121

L0PIQ9              	100.00%		I3NHD8              	100.00%
Bootstrap support for L0PIQ9 as seed ortholog is 100%.
Bootstrap support for I3NHD8 as seed ortholog is 100%.

Group of orthologs #1057. Best score 120 bits
Score difference with first non-orthologous sequence - P.jiroveci:120 S.tridecemlineatus:120

L0PCY1              	100.00%		I3M0Y5              	100.00%
Bootstrap support for L0PCY1 as seed ortholog is 100%.
Bootstrap support for I3M0Y5 as seed ortholog is 100%.

Group of orthologs #1058. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 S.tridecemlineatus:119

L0PG04              	100.00%		I3LX33              	100.00%
                    	       		I3MYH2              	44.08%
Bootstrap support for L0PG04 as seed ortholog is 100%.
Bootstrap support for I3LX33 as seed ortholog is 100%.

Group of orthologs #1059. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 S.tridecemlineatus:119

L0PBW0              	100.00%		I3M2J7              	100.00%
                    	       		I3LWX7              	34.33%
Bootstrap support for L0PBW0 as seed ortholog is 100%.
Bootstrap support for I3M2J7 as seed ortholog is 100%.

Group of orthologs #1060. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 S.tridecemlineatus:119

L0PEZ7              	100.00%		I3M1B4              	100.00%
                    	       		I3MD05              	32.16%
Bootstrap support for L0PEZ7 as seed ortholog is 100%.
Bootstrap support for I3M1B4 as seed ortholog is 100%.

Group of orthologs #1061. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 S.tridecemlineatus:119

L0PFZ8              	100.00%		I3MAK7              	100.00%
                    	       		I3N4J7              	5.03%
Bootstrap support for L0PFZ8 as seed ortholog is 100%.
Bootstrap support for I3MAK7 as seed ortholog is 100%.

Group of orthologs #1062. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 S.tridecemlineatus:119

L0PD37              	100.00%		I3LWK7              	100.00%
Bootstrap support for L0PD37 as seed ortholog is 100%.
Bootstrap support for I3LWK7 as seed ortholog is 100%.

Group of orthologs #1063. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 S.tridecemlineatus:119

L0P799              	100.00%		I3MI66              	100.00%
Bootstrap support for L0P799 as seed ortholog is 100%.
Bootstrap support for I3MI66 as seed ortholog is 100%.

Group of orthologs #1064. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 S.tridecemlineatus:119

L0PFI5              	100.00%		I3MAD0              	100.00%
Bootstrap support for L0PFI5 as seed ortholog is 100%.
Bootstrap support for I3MAD0 as seed ortholog is 100%.

Group of orthologs #1065. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 S.tridecemlineatus:119

L0PE35              	100.00%		I3MGI4              	100.00%
Bootstrap support for L0PE35 as seed ortholog is 100%.
Bootstrap support for I3MGI4 as seed ortholog is 100%.

Group of orthologs #1066. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 S.tridecemlineatus:118

L0P9N5              	100.00%		I3NHA3              	100.00%
                    	       		I3N1W1              	36.97%
                    	       		I3N0F3              	28.91%
Bootstrap support for L0P9N5 as seed ortholog is 100%.
Bootstrap support for I3NHA3 as seed ortholog is 100%.

Group of orthologs #1067. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 S.tridecemlineatus:118

L0PGM7              	100.00%		I3LYI8              	100.00%
L0PGY6              	94.69%		
Bootstrap support for L0PGM7 as seed ortholog is 100%.
Bootstrap support for I3LYI8 as seed ortholog is 100%.

Group of orthologs #1068. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 S.tridecemlineatus:118

L0PGF6              	100.00%		I3M4G5              	100.00%
                    	       		I3MDA6              	43.88%
Bootstrap support for L0PGF6 as seed ortholog is 100%.
Bootstrap support for I3M4G5 as seed ortholog is 100%.

Group of orthologs #1069. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 S.tridecemlineatus:31

L0PAF2              	100.00%		I3MB46              	100.00%
                    	       		I3NAR9              	9.03%
Bootstrap support for L0PAF2 as seed ortholog is 100%.
Bootstrap support for I3MB46 as seed ortholog is 81%.

Group of orthologs #1070. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 S.tridecemlineatus:118

L0P872              	100.00%		I3M8P3              	100.00%
Bootstrap support for L0P872 as seed ortholog is 100%.
Bootstrap support for I3M8P3 as seed ortholog is 100%.

Group of orthologs #1071. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 S.tridecemlineatus:118

L0PAS0              	100.00%		I3M6N8              	100.00%
Bootstrap support for L0PAS0 as seed ortholog is 100%.
Bootstrap support for I3M6N8 as seed ortholog is 100%.

Group of orthologs #1072. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 S.tridecemlineatus:118

L0P9A7              	100.00%		I3M8L8              	100.00%
Bootstrap support for L0P9A7 as seed ortholog is 100%.
Bootstrap support for I3M8L8 as seed ortholog is 100%.

Group of orthologs #1073. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 S.tridecemlineatus:118

L0PFW3              	100.00%		I3MDD1              	100.00%
Bootstrap support for L0PFW3 as seed ortholog is 100%.
Bootstrap support for I3MDD1 as seed ortholog is 100%.

Group of orthologs #1074. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 S.tridecemlineatus:118

L0PFV2              	100.00%		I3MDV1              	100.00%
Bootstrap support for L0PFV2 as seed ortholog is 100%.
Bootstrap support for I3MDV1 as seed ortholog is 100%.

Group of orthologs #1075. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 S.tridecemlineatus:118

L0PD00              	100.00%		I3ML34              	100.00%
Bootstrap support for L0PD00 as seed ortholog is 100%.
Bootstrap support for I3ML34 as seed ortholog is 100%.

Group of orthologs #1076. Best score 117 bits
Score difference with first non-orthologous sequence - P.jiroveci:117 S.tridecemlineatus:117

L0PEZ8              	100.00%		I3M7D4              	100.00%
Bootstrap support for L0PEZ8 as seed ortholog is 100%.
Bootstrap support for I3M7D4 as seed ortholog is 100%.

Group of orthologs #1077. Best score 117 bits
Score difference with first non-orthologous sequence - P.jiroveci:117 S.tridecemlineatus:117

L0PAW6              	100.00%		I3N321              	100.00%
Bootstrap support for L0PAW6 as seed ortholog is 100%.
Bootstrap support for I3N321 as seed ortholog is 100%.

Group of orthologs #1078. Best score 117 bits
Score difference with first non-orthologous sequence - P.jiroveci:117 S.tridecemlineatus:117

L0P8M3              	100.00%		I3N9J6              	100.00%
Bootstrap support for L0P8M3 as seed ortholog is 100%.
Bootstrap support for I3N9J6 as seed ortholog is 100%.

Group of orthologs #1079. Best score 116 bits
Score difference with first non-orthologous sequence - P.jiroveci:116 S.tridecemlineatus:3

L0PAR1              	100.00%		I3N4W3              	100.00%
                    	       		I3MZ59              	43.34%
                    	       		I3M6P1              	8.57%
Bootstrap support for L0PAR1 as seed ortholog is 100%.
Bootstrap support for I3N4W3 as seed ortholog is 53%.
Alternative seed ortholog is I3M0G9 (3 bits away from this cluster)

Group of orthologs #1080. Best score 116 bits
Score difference with first non-orthologous sequence - P.jiroveci:116 S.tridecemlineatus:5

L0PF05              	100.00%		I3MAA5              	100.00%
                    	       		I3MHK0              	18.97%
Bootstrap support for L0PF05 as seed ortholog is 100%.
Bootstrap support for I3MAA5 as seed ortholog is 56%.
Alternative seed ortholog is I3NCA0 (5 bits away from this cluster)

Group of orthologs #1081. Best score 116 bits
Score difference with first non-orthologous sequence - P.jiroveci:116 S.tridecemlineatus:9

L0P984              	100.00%		I3M4Q4              	100.00%
Bootstrap support for L0P984 as seed ortholog is 100%.
Bootstrap support for I3M4Q4 as seed ortholog is 59%.
Alternative seed ortholog is I3M0M7 (9 bits away from this cluster)

Group of orthologs #1082. Best score 116 bits
Score difference with first non-orthologous sequence - P.jiroveci:116 S.tridecemlineatus:116

L0PFI7              	100.00%		I3M2Q4              	100.00%
Bootstrap support for L0PFI7 as seed ortholog is 100%.
Bootstrap support for I3M2Q4 as seed ortholog is 100%.

Group of orthologs #1083. Best score 116 bits
Score difference with first non-orthologous sequence - P.jiroveci:116 S.tridecemlineatus:37

L0PGC0              	100.00%		I3MTA9              	100.00%
Bootstrap support for L0PGC0 as seed ortholog is 100%.
Bootstrap support for I3MTA9 as seed ortholog is 90%.

Group of orthologs #1084. Best score 115 bits
Score difference with first non-orthologous sequence - P.jiroveci:42 S.tridecemlineatus:49

L0P982              	100.00%		I3MQC6              	100.00%
                    	       		I3LW92              	61.67%
                    	       		I3LY02              	34.63%
                    	       		I3M2D1              	26.26%
                    	       		I3MW77              	18.87%
                    	       		I3MTK6              	17.70%
Bootstrap support for L0P982 as seed ortholog is 87%.
Bootstrap support for I3MQC6 as seed ortholog is 92%.

Group of orthologs #1085. Best score 115 bits
Score difference with first non-orthologous sequence - P.jiroveci:115 S.tridecemlineatus:115

L0PD85              	100.00%		I3MJE2              	100.00%
L0PGV7              	61.32%		
Bootstrap support for L0PD85 as seed ortholog is 100%.
Bootstrap support for I3MJE2 as seed ortholog is 100%.

Group of orthologs #1086. Best score 115 bits
Score difference with first non-orthologous sequence - P.jiroveci:115 S.tridecemlineatus:115

L0PGB6              	100.00%		I3MMF7              	100.00%
L0PG66              	85.20%		
Bootstrap support for L0PGB6 as seed ortholog is 100%.
Bootstrap support for I3MMF7 as seed ortholog is 100%.

Group of orthologs #1087. Best score 115 bits
Score difference with first non-orthologous sequence - P.jiroveci:115 S.tridecemlineatus:115

L0PAK0              	100.00%		I3NF13              	100.00%
                    	       		I3N3E0              	8.70%
Bootstrap support for L0PAK0 as seed ortholog is 100%.
Bootstrap support for I3NF13 as seed ortholog is 100%.

Group of orthologs #1088. Best score 115 bits
Score difference with first non-orthologous sequence - P.jiroveci:115 S.tridecemlineatus:115

L0PHM1              	100.00%		I3MAM8              	100.00%
Bootstrap support for L0PHM1 as seed ortholog is 100%.
Bootstrap support for I3MAM8 as seed ortholog is 100%.

Group of orthologs #1089. Best score 115 bits
Score difference with first non-orthologous sequence - P.jiroveci:115 S.tridecemlineatus:115

L0PA59              	100.00%		I3MP39              	100.00%
Bootstrap support for L0PA59 as seed ortholog is 100%.
Bootstrap support for I3MP39 as seed ortholog is 100%.

Group of orthologs #1090. Best score 114 bits
Score difference with first non-orthologous sequence - P.jiroveci:114 S.tridecemlineatus:114

L0PFF4              	100.00%		I3MKG4              	100.00%
Bootstrap support for L0PFF4 as seed ortholog is 100%.
Bootstrap support for I3MKG4 as seed ortholog is 100%.

Group of orthologs #1091. Best score 112 bits
Score difference with first non-orthologous sequence - P.jiroveci:112 S.tridecemlineatus:112

L0P996              	100.00%		I3MWR4              	100.00%
L0PEI5              	5.31%		
Bootstrap support for L0P996 as seed ortholog is 100%.
Bootstrap support for I3MWR4 as seed ortholog is 100%.

Group of orthologs #1092. Best score 112 bits
Score difference with first non-orthologous sequence - P.jiroveci:112 S.tridecemlineatus:112

L0PCZ2              	100.00%		I3N0U6              	100.00%
                    	       		I3M166              	44.29%
Bootstrap support for L0PCZ2 as seed ortholog is 100%.
Bootstrap support for I3N0U6 as seed ortholog is 100%.

Group of orthologs #1093. Best score 112 bits
Score difference with first non-orthologous sequence - P.jiroveci:112 S.tridecemlineatus:112

L0P9T1              	100.00%		I3M6T4              	100.00%
Bootstrap support for L0P9T1 as seed ortholog is 100%.
Bootstrap support for I3M6T4 as seed ortholog is 100%.

Group of orthologs #1094. Best score 112 bits
Score difference with first non-orthologous sequence - P.jiroveci:112 S.tridecemlineatus:112

L0PEW9              	100.00%		I3MF35              	100.00%
Bootstrap support for L0PEW9 as seed ortholog is 100%.
Bootstrap support for I3MF35 as seed ortholog is 100%.

Group of orthologs #1095. Best score 112 bits
Score difference with first non-orthologous sequence - P.jiroveci:112 S.tridecemlineatus:112

L0P997              	100.00%		I3N805              	100.00%
Bootstrap support for L0P997 as seed ortholog is 100%.
Bootstrap support for I3N805 as seed ortholog is 100%.

Group of orthologs #1096. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 S.tridecemlineatus:63

L0P990              	100.00%		I3M5Q5              	100.00%
                    	       		I3MK08              	53.08%
Bootstrap support for L0P990 as seed ortholog is 100%.
Bootstrap support for I3M5Q5 as seed ortholog is 98%.

Group of orthologs #1097. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:36 S.tridecemlineatus:54

L0PFG2              	100.00%		I3MPU9              	100.00%
                    	       		I3MKA2              	16.81%
Bootstrap support for L0PFG2 as seed ortholog is 90%.
Bootstrap support for I3MPU9 as seed ortholog is 95%.

Group of orthologs #1098. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 S.tridecemlineatus:111

L0PDE5              	100.00%		I3LXQ6              	100.00%
Bootstrap support for L0PDE5 as seed ortholog is 100%.
Bootstrap support for I3LXQ6 as seed ortholog is 100%.

Group of orthologs #1099. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 S.tridecemlineatus:111

L0PCC2              	100.00%		I3M6W4              	100.00%
Bootstrap support for L0PCC2 as seed ortholog is 100%.
Bootstrap support for I3M6W4 as seed ortholog is 100%.

Group of orthologs #1100. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 S.tridecemlineatus:111

L0PCT7              	100.00%		I3MBK7              	100.00%
Bootstrap support for L0PCT7 as seed ortholog is 100%.
Bootstrap support for I3MBK7 as seed ortholog is 100%.

Group of orthologs #1101. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 S.tridecemlineatus:111

L0PCI9              	100.00%		I3MC11              	100.00%
Bootstrap support for L0PCI9 as seed ortholog is 100%.
Bootstrap support for I3MC11 as seed ortholog is 100%.

Group of orthologs #1102. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 S.tridecemlineatus:111

L0PD19              	100.00%		I3MY27              	100.00%
Bootstrap support for L0PD19 as seed ortholog is 100%.
Bootstrap support for I3MY27 as seed ortholog is 100%.

Group of orthologs #1103. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 S.tridecemlineatus:111

L0PBA3              	100.00%		I3N017              	100.00%
Bootstrap support for L0PBA3 as seed ortholog is 100%.
Bootstrap support for I3N017 as seed ortholog is 100%.

Group of orthologs #1104. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 S.tridecemlineatus:111

L0PGP3              	100.00%		I3N2A6              	100.00%
Bootstrap support for L0PGP3 as seed ortholog is 100%.
Bootstrap support for I3N2A6 as seed ortholog is 100%.

Group of orthologs #1105. Best score 110 bits
Score difference with first non-orthologous sequence - P.jiroveci:110 S.tridecemlineatus:110

L0P8T2              	100.00%		I3MQ95              	100.00%
L0PA19              	81.31%		
Bootstrap support for L0P8T2 as seed ortholog is 100%.
Bootstrap support for I3MQ95 as seed ortholog is 100%.

Group of orthologs #1106. Best score 110 bits
Score difference with first non-orthologous sequence - P.jiroveci:110 S.tridecemlineatus:110

L0PGR9              	100.00%		I3M239              	100.00%
Bootstrap support for L0PGR9 as seed ortholog is 100%.
Bootstrap support for I3M239 as seed ortholog is 100%.

Group of orthologs #1107. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 S.tridecemlineatus:18

L0P6Z0              	100.00%		I3M585              	100.00%
                    	       		I3M834              	20.83%
                    	       		I3M8Y5              	12.66%
Bootstrap support for L0P6Z0 as seed ortholog is 100%.
Bootstrap support for I3M585 as seed ortholog is 78%.

Group of orthologs #1108. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 S.tridecemlineatus:109

L0PFG4              	100.00%		I3MMS5              	100.00%
L0P939              	37.26%		
Bootstrap support for L0PFG4 as seed ortholog is 100%.
Bootstrap support for I3MMS5 as seed ortholog is 100%.

Group of orthologs #1109. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 S.tridecemlineatus:109

L0PAS5              	100.00%		I3NFJ7              	100.00%
                    	       		I3NCC0              	33.52%
Bootstrap support for L0PAS5 as seed ortholog is 100%.
Bootstrap support for I3NFJ7 as seed ortholog is 100%.

Group of orthologs #1110. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 S.tridecemlineatus:109

L0PFM7              	100.00%		I3LVX5              	100.00%
Bootstrap support for L0PFM7 as seed ortholog is 100%.
Bootstrap support for I3LVX5 as seed ortholog is 100%.

Group of orthologs #1111. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 S.tridecemlineatus:109

L0P8L2              	100.00%		I3MAW9              	100.00%
Bootstrap support for L0P8L2 as seed ortholog is 100%.
Bootstrap support for I3MAW9 as seed ortholog is 100%.

Group of orthologs #1112. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 S.tridecemlineatus:109

L0PFM0              	100.00%		I3M8F5              	100.00%
Bootstrap support for L0PFM0 as seed ortholog is 100%.
Bootstrap support for I3M8F5 as seed ortholog is 100%.

Group of orthologs #1113. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 S.tridecemlineatus:109

L0PDW8              	100.00%		I3MR10              	100.00%
Bootstrap support for L0PDW8 as seed ortholog is 100%.
Bootstrap support for I3MR10 as seed ortholog is 100%.

Group of orthologs #1114. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 S.tridecemlineatus:109

L0PH07              	100.00%		I3MUQ8              	100.00%
Bootstrap support for L0PH07 as seed ortholog is 100%.
Bootstrap support for I3MUQ8 as seed ortholog is 100%.

Group of orthologs #1115. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 S.tridecemlineatus:61

L0PEE1              	100.00%		I3NGX9              	100.00%
Bootstrap support for L0PEE1 as seed ortholog is 100%.
Bootstrap support for I3NGX9 as seed ortholog is 99%.

Group of orthologs #1116. Best score 108 bits
Score difference with first non-orthologous sequence - P.jiroveci:35 S.tridecemlineatus:36

L0PBE1              	100.00%		I3LZ36              	100.00%
                    	       		I3M6T0              	93.85%
                    	       		I3M6T5              	92.21%
                    	       		I3M126              	29.51%
                    	       		I3MTZ5              	29.10%
                    	       		I3NEG2              	25.82%
                    	       		I3M0Z8              	25.41%
                    	       		I3NDB3              	24.18%
                    	       		I3MWQ7              	8.20%
Bootstrap support for L0PBE1 as seed ortholog is 94%.
Bootstrap support for I3LZ36 as seed ortholog is 97%.

Group of orthologs #1117. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 S.tridecemlineatus:107

L0PD09              	100.00%		I3MUB8              	100.00%
                    	       		I3N0B3              	11.35%
                    	       		I3MDV4              	10.71%
                    	       		I3N1Y2              	10.06%
                    	       		I3N4Q0              	9.96%
                    	       		I3MP93              	8.78%
                    	       		I3MT26              	7.60%
                    	       		I3N3W8              	7.60%
                    	       		I3NAC1              	7.60%
                    	       		I3M7A9              	6.42%
                    	       		I3MVL5              	6.32%
Bootstrap support for L0PD09 as seed ortholog is 100%.
Bootstrap support for I3MUB8 as seed ortholog is 100%.

Group of orthologs #1118. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 S.tridecemlineatus:107

L0PBQ7              	100.00%		I3MEM0              	100.00%
                    	       		I3LY28              	81.35%
                    	       		I3MDR2              	56.18%
                    	       		I3M9A9              	53.15%
                    	       		I3LX14              	27.04%
                    	       		I3NE75              	7.23%
Bootstrap support for L0PBQ7 as seed ortholog is 100%.
Bootstrap support for I3MEM0 as seed ortholog is 100%.

Group of orthologs #1119. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 S.tridecemlineatus:18

L0PCL8              	100.00%		I3MKU0              	100.00%
                    	       		I3N5I4              	42.72%
                    	       		I3MNY6              	7.37%
Bootstrap support for L0PCL8 as seed ortholog is 100%.
Bootstrap support for I3MKU0 as seed ortholog is 56%.
Alternative seed ortholog is I3MD75 (18 bits away from this cluster)

Group of orthologs #1120. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 S.tridecemlineatus:16

L0PF58              	100.00%		I3N6G1              	100.00%
                    	       		I3MG35              	37.18%
Bootstrap support for L0PF58 as seed ortholog is 100%.
Bootstrap support for I3N6G1 as seed ortholog is 70%.
Alternative seed ortholog is I3MPQ5 (16 bits away from this cluster)

Group of orthologs #1121. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 S.tridecemlineatus:107

L0PB99              	100.00%		I3M403              	100.00%
Bootstrap support for L0PB99 as seed ortholog is 100%.
Bootstrap support for I3M403 as seed ortholog is 100%.

Group of orthologs #1122. Best score 106 bits
Score difference with first non-orthologous sequence - P.jiroveci:106 S.tridecemlineatus:106

L0P6Z5              	100.00%		I3NBX1              	100.00%
                    	       		I3LVW1              	49.62%
                    	       		I3N5G8              	26.15%
                    	       		I3MWP2              	5.19%
Bootstrap support for L0P6Z5 as seed ortholog is 100%.
Bootstrap support for I3NBX1 as seed ortholog is 100%.

Group of orthologs #1123. Best score 106 bits
Score difference with first non-orthologous sequence - P.jiroveci:106 S.tridecemlineatus:106

L0P8J6              	100.00%		I3M874              	100.00%
Bootstrap support for L0P8J6 as seed ortholog is 100%.
Bootstrap support for I3M874 as seed ortholog is 100%.

Group of orthologs #1124. Best score 106 bits
Score difference with first non-orthologous sequence - P.jiroveci:106 S.tridecemlineatus:106

L0P7D7              	100.00%		I3MVS4              	100.00%
Bootstrap support for L0P7D7 as seed ortholog is 100%.
Bootstrap support for I3MVS4 as seed ortholog is 100%.

Group of orthologs #1125. Best score 106 bits
Score difference with first non-orthologous sequence - P.jiroveci:106 S.tridecemlineatus:106

L0PAM7              	100.00%		I3N5H0              	100.00%
Bootstrap support for L0PAM7 as seed ortholog is 100%.
Bootstrap support for I3N5H0 as seed ortholog is 100%.

Group of orthologs #1126. Best score 105 bits
Score difference with first non-orthologous sequence - P.jiroveci:105 S.tridecemlineatus:105

L0PDI3              	100.00%		I3MWW5              	100.00%
                    	       		I3LW35              	71.88%
Bootstrap support for L0PDI3 as seed ortholog is 100%.
Bootstrap support for I3MWW5 as seed ortholog is 100%.

Group of orthologs #1127. Best score 105 bits
Score difference with first non-orthologous sequence - P.jiroveci:105 S.tridecemlineatus:105

L0PFG8              	100.00%		I3MD96              	100.00%
Bootstrap support for L0PFG8 as seed ortholog is 100%.
Bootstrap support for I3MD96 as seed ortholog is 100%.

Group of orthologs #1128. Best score 105 bits
Score difference with first non-orthologous sequence - P.jiroveci:37 S.tridecemlineatus:44

L0PEK0              	100.00%		I3MTN1              	100.00%
Bootstrap support for L0PEK0 as seed ortholog is 93%.
Bootstrap support for I3MTN1 as seed ortholog is 95%.

Group of orthologs #1129. Best score 105 bits
Score difference with first non-orthologous sequence - P.jiroveci:105 S.tridecemlineatus:105

L0P9Z6              	100.00%		I3ND94              	100.00%
Bootstrap support for L0P9Z6 as seed ortholog is 100%.
Bootstrap support for I3ND94 as seed ortholog is 100%.

Group of orthologs #1130. Best score 105 bits
Score difference with first non-orthologous sequence - P.jiroveci:105 S.tridecemlineatus:105

L0PCT2              	100.00%		I3NET5              	100.00%
Bootstrap support for L0PCT2 as seed ortholog is 100%.
Bootstrap support for I3NET5 as seed ortholog is 100%.

Group of orthologs #1131. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 S.tridecemlineatus:104

L0PBX3              	100.00%		I3M2R5              	100.00%
Bootstrap support for L0PBX3 as seed ortholog is 100%.
Bootstrap support for I3M2R5 as seed ortholog is 100%.

Group of orthologs #1132. Best score 103 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 S.tridecemlineatus:103

L0PC01              	100.00%		I3MMT7              	100.00%
                    	       		I3MLU0              	41.24%
                    	       		I3M0D1              	11.91%
Bootstrap support for L0PC01 as seed ortholog is 100%.
Bootstrap support for I3MMT7 as seed ortholog is 100%.

Group of orthologs #1133. Best score 103 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 S.tridecemlineatus:103

L0PDM8              	100.00%		I3LYD5              	100.00%
Bootstrap support for L0PDM8 as seed ortholog is 100%.
Bootstrap support for I3LYD5 as seed ortholog is 100%.

Group of orthologs #1134. Best score 103 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 S.tridecemlineatus:30

L0P9W5              	100.00%		I3M8X5              	100.00%
Bootstrap support for L0P9W5 as seed ortholog is 100%.
Bootstrap support for I3M8X5 as seed ortholog is 69%.
Alternative seed ortholog is I3M9Z9 (30 bits away from this cluster)

Group of orthologs #1135. Best score 103 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 S.tridecemlineatus:103

L0PBX4              	100.00%		I3MPQ3              	100.00%
Bootstrap support for L0PBX4 as seed ortholog is 100%.
Bootstrap support for I3MPQ3 as seed ortholog is 100%.

Group of orthologs #1136. Best score 103 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 S.tridecemlineatus:103

L0P8G4              	100.00%		I3N415              	100.00%
Bootstrap support for L0P8G4 as seed ortholog is 100%.
Bootstrap support for I3N415 as seed ortholog is 100%.

Group of orthologs #1137. Best score 103 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 S.tridecemlineatus:103

L0PGS9              	100.00%		I3NHQ6              	100.00%
Bootstrap support for L0PGS9 as seed ortholog is 100%.
Bootstrap support for I3NHQ6 as seed ortholog is 100%.

Group of orthologs #1138. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:102 S.tridecemlineatus:102

L0P9H0              	100.00%		I3N2E2              	100.00%
                    	       		I3LWS8              	40.48%
Bootstrap support for L0P9H0 as seed ortholog is 100%.
Bootstrap support for I3N2E2 as seed ortholog is 100%.

Group of orthologs #1139. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:102 S.tridecemlineatus:102

L0P9F1              	100.00%		I3NDR8              	100.00%
                    	       		I3MT82              	60.75%
Bootstrap support for L0P9F1 as seed ortholog is 100%.
Bootstrap support for I3NDR8 as seed ortholog is 100%.

Group of orthologs #1140. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:102 S.tridecemlineatus:102

L0PBQ3              	100.00%		I3M343              	100.00%
Bootstrap support for L0PBQ3 as seed ortholog is 100%.
Bootstrap support for I3M343 as seed ortholog is 100%.

Group of orthologs #1141. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:102 S.tridecemlineatus:57

L0PE10              	100.00%		I3M9M1              	100.00%
Bootstrap support for L0PE10 as seed ortholog is 100%.
Bootstrap support for I3M9M1 as seed ortholog is 98%.

Group of orthologs #1142. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:102 S.tridecemlineatus:102

L0PF35              	100.00%		I3NGV5              	100.00%
Bootstrap support for L0PF35 as seed ortholog is 100%.
Bootstrap support for I3NGV5 as seed ortholog is 100%.

Group of orthologs #1143. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 S.tridecemlineatus:101

L0PF90              	100.00%		I3M1B3              	100.00%
                    	       		I3MB11              	55.80%
Bootstrap support for L0PF90 as seed ortholog is 100%.
Bootstrap support for I3M1B3 as seed ortholog is 100%.

Group of orthologs #1144. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 S.tridecemlineatus:101

L0P9R5              	100.00%		I3MDG9              	100.00%
Bootstrap support for L0P9R5 as seed ortholog is 100%.
Bootstrap support for I3MDG9 as seed ortholog is 100%.

Group of orthologs #1145. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:29 S.tridecemlineatus:101

L0PD30              	100.00%		I3MRU4              	100.00%
Bootstrap support for L0PD30 as seed ortholog is 85%.
Bootstrap support for I3MRU4 as seed ortholog is 100%.

Group of orthologs #1146. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 S.tridecemlineatus:101

L0PEL9              	100.00%		I3N359              	100.00%
Bootstrap support for L0PEL9 as seed ortholog is 100%.
Bootstrap support for I3N359 as seed ortholog is 100%.

Group of orthologs #1147. Best score 100 bits
Score difference with first non-orthologous sequence - P.jiroveci:100 S.tridecemlineatus:100

L0P8Q8              	100.00%		I3NA81              	100.00%
                    	       		I3MFR3              	46.32%
Bootstrap support for L0P8Q8 as seed ortholog is 100%.
Bootstrap support for I3NA81 as seed ortholog is 100%.

Group of orthologs #1148. Best score 100 bits
Score difference with first non-orthologous sequence - P.jiroveci:100 S.tridecemlineatus:100

L0P7T7              	100.00%		I3MED1              	100.00%
Bootstrap support for L0P7T7 as seed ortholog is 100%.
Bootstrap support for I3MED1 as seed ortholog is 100%.

Group of orthologs #1149. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 S.tridecemlineatus:99

L0PEZ6              	100.00%		I3LZA8              	100.00%
Bootstrap support for L0PEZ6 as seed ortholog is 100%.
Bootstrap support for I3LZA8 as seed ortholog is 100%.

Group of orthologs #1150. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 S.tridecemlineatus:99

L0P701              	100.00%		I3MAL9              	100.00%
Bootstrap support for L0P701 as seed ortholog is 100%.
Bootstrap support for I3MAL9 as seed ortholog is 100%.

Group of orthologs #1151. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 S.tridecemlineatus:99

L0P8A1              	100.00%		I3MCQ6              	100.00%
Bootstrap support for L0P8A1 as seed ortholog is 100%.
Bootstrap support for I3MCQ6 as seed ortholog is 100%.

Group of orthologs #1152. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 S.tridecemlineatus:99

L0PHI8              	100.00%		I3MDP2              	100.00%
Bootstrap support for L0PHI8 as seed ortholog is 100%.
Bootstrap support for I3MDP2 as seed ortholog is 100%.

Group of orthologs #1153. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 S.tridecemlineatus:40

L0PE14              	100.00%		I3MLU9              	100.00%
Bootstrap support for L0PE14 as seed ortholog is 100%.
Bootstrap support for I3MLU9 as seed ortholog is 99%.

Group of orthologs #1154. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 S.tridecemlineatus:99

L0PCQ4              	100.00%		I3N8F8              	100.00%
Bootstrap support for L0PCQ4 as seed ortholog is 100%.
Bootstrap support for I3N8F8 as seed ortholog is 100%.

Group of orthologs #1155. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 S.tridecemlineatus:99

L0P7Q2              	100.00%		I3NF47              	100.00%
Bootstrap support for L0P7Q2 as seed ortholog is 100%.
Bootstrap support for I3NF47 as seed ortholog is 100%.

Group of orthologs #1156. Best score 98 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 S.tridecemlineatus:31

L0P9W7              	100.00%		I3MZF3              	100.00%
                    	       		I3NHN3              	70.25%
Bootstrap support for L0P9W7 as seed ortholog is 100%.
Bootstrap support for I3MZF3 as seed ortholog is 92%.

Group of orthologs #1157. Best score 98 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 S.tridecemlineatus:98

L0P9T8              	100.00%		I3N2D2              	100.00%
                    	       		I3M391              	29.29%
Bootstrap support for L0P9T8 as seed ortholog is 100%.
Bootstrap support for I3N2D2 as seed ortholog is 100%.

Group of orthologs #1158. Best score 98 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 S.tridecemlineatus:46

L0PFQ6              	100.00%		I3M034              	100.00%
Bootstrap support for L0PFQ6 as seed ortholog is 100%.
Bootstrap support for I3M034 as seed ortholog is 91%.

Group of orthologs #1159. Best score 98 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 S.tridecemlineatus:98

L0P9C0              	100.00%		I3MBB4              	100.00%
Bootstrap support for L0P9C0 as seed ortholog is 100%.
Bootstrap support for I3MBB4 as seed ortholog is 100%.

Group of orthologs #1160. Best score 98 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 S.tridecemlineatus:98

L0PD86              	100.00%		I3MB72              	100.00%
Bootstrap support for L0PD86 as seed ortholog is 100%.
Bootstrap support for I3MB72 as seed ortholog is 100%.

Group of orthologs #1161. Best score 98 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 S.tridecemlineatus:98

L0PE32              	100.00%		I3NAD4              	100.00%
Bootstrap support for L0PE32 as seed ortholog is 100%.
Bootstrap support for I3NAD4 as seed ortholog is 100%.

Group of orthologs #1162. Best score 97 bits
Score difference with first non-orthologous sequence - P.jiroveci:97 S.tridecemlineatus:97

L0PC19              	100.00%		I3LXZ0              	100.00%
                    	       		I3MZP3              	29.55%
Bootstrap support for L0PC19 as seed ortholog is 100%.
Bootstrap support for I3LXZ0 as seed ortholog is 100%.

Group of orthologs #1163. Best score 97 bits
Score difference with first non-orthologous sequence - P.jiroveci:97 S.tridecemlineatus:97

L0P7W8              	100.00%		I3ML83              	100.00%
L0P8R2              	100.00%		
Bootstrap support for L0P7W8 as seed ortholog is 100%.
Bootstrap support for L0P8R2 as seed ortholog is 100%.
Bootstrap support for I3ML83 as seed ortholog is 100%.

Group of orthologs #1164. Best score 97 bits
Score difference with first non-orthologous sequence - P.jiroveci:97 S.tridecemlineatus:97

L0PAV4              	100.00%		I3LWT3              	100.00%
Bootstrap support for L0PAV4 as seed ortholog is 100%.
Bootstrap support for I3LWT3 as seed ortholog is 100%.

Group of orthologs #1165. Best score 97 bits
Score difference with first non-orthologous sequence - P.jiroveci:97 S.tridecemlineatus:97

L0PBK9              	100.00%		I3M0U5              	100.00%
Bootstrap support for L0PBK9 as seed ortholog is 100%.
Bootstrap support for I3M0U5 as seed ortholog is 100%.

Group of orthologs #1166. Best score 97 bits
Score difference with first non-orthologous sequence - P.jiroveci:97 S.tridecemlineatus:97

L0P9E6              	100.00%		I3M3Y5              	100.00%
Bootstrap support for L0P9E6 as seed ortholog is 100%.
Bootstrap support for I3M3Y5 as seed ortholog is 100%.

Group of orthologs #1167. Best score 97 bits
Score difference with first non-orthologous sequence - P.jiroveci:97 S.tridecemlineatus:97

L0P868              	100.00%		I3N3C2              	100.00%
Bootstrap support for L0P868 as seed ortholog is 100%.
Bootstrap support for I3N3C2 as seed ortholog is 100%.

Group of orthologs #1168. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 S.tridecemlineatus:96

L0PD58              	100.00%		I3LZM7              	100.00%
Bootstrap support for L0PD58 as seed ortholog is 100%.
Bootstrap support for I3LZM7 as seed ortholog is 100%.

Group of orthologs #1169. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 S.tridecemlineatus:96

L0P9M5              	100.00%		I3M529              	100.00%
Bootstrap support for L0P9M5 as seed ortholog is 100%.
Bootstrap support for I3M529 as seed ortholog is 100%.

Group of orthologs #1170. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 S.tridecemlineatus:96

L0PI42              	100.00%		I3M0W3              	100.00%
Bootstrap support for L0PI42 as seed ortholog is 100%.
Bootstrap support for I3M0W3 as seed ortholog is 100%.

Group of orthologs #1171. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 S.tridecemlineatus:96

L0PEI6              	100.00%		I3M4P6              	100.00%
Bootstrap support for L0PEI6 as seed ortholog is 100%.
Bootstrap support for I3M4P6 as seed ortholog is 100%.

Group of orthologs #1172. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 S.tridecemlineatus:96

L0PBD3              	100.00%		I3MD11              	100.00%
Bootstrap support for L0PBD3 as seed ortholog is 100%.
Bootstrap support for I3MD11 as seed ortholog is 100%.

Group of orthologs #1173. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 S.tridecemlineatus:96

L0PG13              	100.00%		I3MBF4              	100.00%
Bootstrap support for L0PG13 as seed ortholog is 100%.
Bootstrap support for I3MBF4 as seed ortholog is 100%.

Group of orthologs #1174. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 S.tridecemlineatus:42

L0PFA1              	100.00%		I3MFH2              	100.00%
Bootstrap support for L0PFA1 as seed ortholog is 100%.
Bootstrap support for I3MFH2 as seed ortholog is 99%.

Group of orthologs #1175. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 S.tridecemlineatus:96

L0PGF4              	100.00%		I3MI24              	100.00%
Bootstrap support for L0PGF4 as seed ortholog is 100%.
Bootstrap support for I3MI24 as seed ortholog is 100%.

Group of orthologs #1176. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 S.tridecemlineatus:96

L0PCF7              	100.00%		I3MN28              	100.00%
Bootstrap support for L0PCF7 as seed ortholog is 100%.
Bootstrap support for I3MN28 as seed ortholog is 100%.

Group of orthologs #1177. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 S.tridecemlineatus:96

L0PFT3              	100.00%		I3MMB5              	100.00%
Bootstrap support for L0PFT3 as seed ortholog is 100%.
Bootstrap support for I3MMB5 as seed ortholog is 100%.

Group of orthologs #1178. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 S.tridecemlineatus:43

L0P8J9              	100.00%		I3MWR8              	100.00%
Bootstrap support for L0P8J9 as seed ortholog is 100%.
Bootstrap support for I3MWR8 as seed ortholog is 92%.

Group of orthologs #1179. Best score 95 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 S.tridecemlineatus:95

L0P8Y9              	100.00%		I3LY06              	100.00%
                    	       		I3ME43              	47.79%
Bootstrap support for L0P8Y9 as seed ortholog is 100%.
Bootstrap support for I3LY06 as seed ortholog is 100%.

Group of orthologs #1180. Best score 95 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 S.tridecemlineatus:14

L0PCM4              	100.00%		I3MIH8              	100.00%
                    	       		I3M8E8              	55.24%
Bootstrap support for L0PCM4 as seed ortholog is 100%.
Bootstrap support for I3MIH8 as seed ortholog is 72%.
Alternative seed ortholog is I3MY48 (14 bits away from this cluster)

Group of orthologs #1181. Best score 95 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 S.tridecemlineatus:16

L0P9X1              	100.00%		I3ND68              	100.00%
                    	       		I3MDS1              	21.23%
Bootstrap support for L0P9X1 as seed ortholog is 100%.
Bootstrap support for I3ND68 as seed ortholog is 68%.
Alternative seed ortholog is I3ML28 (16 bits away from this cluster)

Group of orthologs #1182. Best score 95 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 S.tridecemlineatus:95

L0PEX4              	100.00%		I3M6K6              	100.00%
Bootstrap support for L0PEX4 as seed ortholog is 100%.
Bootstrap support for I3M6K6 as seed ortholog is 100%.

Group of orthologs #1183. Best score 95 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 S.tridecemlineatus:95

L0PHZ2              	100.00%		I3M8Y3              	100.00%
Bootstrap support for L0PHZ2 as seed ortholog is 100%.
Bootstrap support for I3M8Y3 as seed ortholog is 100%.

Group of orthologs #1184. Best score 95 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 S.tridecemlineatus:48

L0P9D5              	100.00%		I3NAT9              	100.00%
Bootstrap support for L0P9D5 as seed ortholog is 100%.
Bootstrap support for I3NAT9 as seed ortholog is 89%.

Group of orthologs #1185. Best score 95 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 S.tridecemlineatus:95

L0PBZ3              	100.00%		I3NCN8              	100.00%
Bootstrap support for L0PBZ3 as seed ortholog is 100%.
Bootstrap support for I3NCN8 as seed ortholog is 100%.

Group of orthologs #1186. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 S.tridecemlineatus:94

L0PB42              	100.00%		I3MFS6              	100.00%
                    	       		I3NGE6              	60.45%
                    	       		I3MBE0              	58.96%
                    	       		I3N4X5              	39.55%
Bootstrap support for L0PB42 as seed ortholog is 100%.
Bootstrap support for I3MFS6 as seed ortholog is 100%.

Group of orthologs #1187. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 S.tridecemlineatus:52

L0PCQ5              	100.00%		I3MC06              	100.00%
                    	       		I3MGJ9              	78.33%
Bootstrap support for L0PCQ5 as seed ortholog is 100%.
Bootstrap support for I3MC06 as seed ortholog is 99%.

Group of orthologs #1188. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 S.tridecemlineatus:94

L0PDY4              	100.00%		I3MBF6              	100.00%
                    	       		I3N3G8              	42.04%
Bootstrap support for L0PDY4 as seed ortholog is 100%.
Bootstrap support for I3MBF6 as seed ortholog is 100%.

Group of orthologs #1189. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 S.tridecemlineatus:94

L0PF82              	100.00%		I3MGS0              	100.00%
                    	       		I3M699              	84.71%
Bootstrap support for L0PF82 as seed ortholog is 100%.
Bootstrap support for I3MGS0 as seed ortholog is 100%.

Group of orthologs #1190. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 S.tridecemlineatus:94

L0P8Q1              	100.00%		I3M0Y9              	100.00%
Bootstrap support for L0P8Q1 as seed ortholog is 100%.
Bootstrap support for I3M0Y9 as seed ortholog is 100%.

Group of orthologs #1191. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 S.tridecemlineatus:49

L0PFV4              	100.00%		I3LZP7              	100.00%
Bootstrap support for L0PFV4 as seed ortholog is 100%.
Bootstrap support for I3LZP7 as seed ortholog is 99%.

Group of orthologs #1192. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 S.tridecemlineatus:94

L0PE82              	100.00%		I3MJZ6              	100.00%
Bootstrap support for L0PE82 as seed ortholog is 100%.
Bootstrap support for I3MJZ6 as seed ortholog is 100%.

Group of orthologs #1193. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 S.tridecemlineatus:94

L0PEA3              	100.00%		I3MTT4              	100.00%
Bootstrap support for L0PEA3 as seed ortholog is 100%.
Bootstrap support for I3MTT4 as seed ortholog is 100%.

Group of orthologs #1194. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 S.tridecemlineatus:94

L0PDQ8              	100.00%		I3NDY1              	100.00%
Bootstrap support for L0PDQ8 as seed ortholog is 100%.
Bootstrap support for I3NDY1 as seed ortholog is 100%.

Group of orthologs #1195. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 S.tridecemlineatus:92

L0P847              	100.00%		I3M275              	100.00%
                    	       		I3MPH2              	28.04%
Bootstrap support for L0P847 as seed ortholog is 100%.
Bootstrap support for I3M275 as seed ortholog is 100%.

Group of orthologs #1196. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 S.tridecemlineatus:92

L0PFD1              	100.00%		I3LYN8              	100.00%
Bootstrap support for L0PFD1 as seed ortholog is 100%.
Bootstrap support for I3LYN8 as seed ortholog is 100%.

Group of orthologs #1197. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 S.tridecemlineatus:92

L0P9I2              	100.00%		I3MDU5              	100.00%
Bootstrap support for L0P9I2 as seed ortholog is 100%.
Bootstrap support for I3MDU5 as seed ortholog is 100%.

Group of orthologs #1198. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 S.tridecemlineatus:92

L0PD23              	100.00%		I3MMC6              	100.00%
Bootstrap support for L0PD23 as seed ortholog is 100%.
Bootstrap support for I3MMC6 as seed ortholog is 100%.

Group of orthologs #1199. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 S.tridecemlineatus:37

L0PFT5              	100.00%		I3MJV8              	100.00%
Bootstrap support for L0PFT5 as seed ortholog is 100%.
Bootstrap support for I3MJV8 as seed ortholog is 97%.

Group of orthologs #1200. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 S.tridecemlineatus:92

L0P9X3              	100.00%		I3NEY5              	100.00%
Bootstrap support for L0P9X3 as seed ortholog is 100%.
Bootstrap support for I3NEY5 as seed ortholog is 100%.

Group of orthologs #1201. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 S.tridecemlineatus:91

L0PG18              	100.00%		I3M237              	100.00%
                    	       		I3MJK5              	61.57%
Bootstrap support for L0PG18 as seed ortholog is 100%.
Bootstrap support for I3M237 as seed ortholog is 100%.

Group of orthologs #1202. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 S.tridecemlineatus:91

L0PGB3              	100.00%		I3M4M3              	100.00%
Bootstrap support for L0PGB3 as seed ortholog is 100%.
Bootstrap support for I3M4M3 as seed ortholog is 100%.

Group of orthologs #1203. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 S.tridecemlineatus:91

L0PA80              	100.00%		I3MD56              	100.00%
Bootstrap support for L0PA80 as seed ortholog is 100%.
Bootstrap support for I3MD56 as seed ortholog is 100%.

Group of orthologs #1204. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 S.tridecemlineatus:91

L0PFC4              	100.00%		I3M8J8              	100.00%
Bootstrap support for L0PFC4 as seed ortholog is 100%.
Bootstrap support for I3M8J8 as seed ortholog is 100%.

Group of orthologs #1205. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 S.tridecemlineatus:91

L0PI74              	100.00%		I3MI48              	100.00%
Bootstrap support for L0PI74 as seed ortholog is 100%.
Bootstrap support for I3MI48 as seed ortholog is 100%.

Group of orthologs #1206. Best score 90 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 S.tridecemlineatus:90

L0PFK1              	100.00%		I3MJU2              	100.00%
                    	       		I3MHH0              	12.21%
Bootstrap support for L0PFK1 as seed ortholog is 100%.
Bootstrap support for I3MJU2 as seed ortholog is 100%.

Group of orthologs #1207. Best score 90 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 S.tridecemlineatus:90

L0PDD4              	100.00%		I3LVW3              	100.00%
Bootstrap support for L0PDD4 as seed ortholog is 100%.
Bootstrap support for I3LVW3 as seed ortholog is 100%.

Group of orthologs #1208. Best score 90 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 S.tridecemlineatus:18

L0PAT3              	100.00%		I3M335              	100.00%
Bootstrap support for L0PAT3 as seed ortholog is 100%.
Bootstrap support for I3M335 as seed ortholog is 92%.

Group of orthologs #1209. Best score 90 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 S.tridecemlineatus:90

L0P9A5              	100.00%		I3M7R5              	100.00%
Bootstrap support for L0P9A5 as seed ortholog is 100%.
Bootstrap support for I3M7R5 as seed ortholog is 100%.

Group of orthologs #1210. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 S.tridecemlineatus:89

L0PEH7              	100.00%		I3MJW6              	100.00%
                    	       		I3MKE6              	44.65%
                    	       		I3MV43              	12.36%
Bootstrap support for L0PEH7 as seed ortholog is 100%.
Bootstrap support for I3MJW6 as seed ortholog is 100%.

Group of orthologs #1211. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 S.tridecemlineatus:89

L0PGS0              	100.00%		I3M0S2              	100.00%
                    	       		I3MAM4              	40.21%
Bootstrap support for L0PGS0 as seed ortholog is 100%.
Bootstrap support for I3M0S2 as seed ortholog is 100%.

Group of orthologs #1212. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 S.tridecemlineatus:89

L0PED1              	100.00%		I3MVA4              	100.00%
                    	       		I3M8X9              	6.22%
Bootstrap support for L0PED1 as seed ortholog is 100%.
Bootstrap support for I3MVA4 as seed ortholog is 100%.

Group of orthologs #1213. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 S.tridecemlineatus:89

L0PHU9              	100.00%		I3MKL0              	100.00%
Bootstrap support for L0PHU9 as seed ortholog is 100%.
Bootstrap support for I3MKL0 as seed ortholog is 100%.

Group of orthologs #1214. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 S.tridecemlineatus:89

L0P995              	100.00%		I3N9D3              	100.00%
Bootstrap support for L0P995 as seed ortholog is 100%.
Bootstrap support for I3N9D3 as seed ortholog is 100%.

Group of orthologs #1215. Best score 88 bits
Score difference with first non-orthologous sequence - P.jiroveci:88 S.tridecemlineatus:43

L0PFU9              	100.00%		I3MHV3              	100.00%
                    	       		I3MSP2              	83.56%
                    	       		I3N897              	55.48%
                    	       		I3MDC6              	48.63%
Bootstrap support for L0PFU9 as seed ortholog is 100%.
Bootstrap support for I3MHV3 as seed ortholog is 95%.

Group of orthologs #1216. Best score 88 bits
Score difference with first non-orthologous sequence - P.jiroveci:88 S.tridecemlineatus:34

L0PD56              	100.00%		I3MMV0              	100.00%
                    	       		I3MIA1              	31.18%
Bootstrap support for L0PD56 as seed ortholog is 100%.
Bootstrap support for I3MMV0 as seed ortholog is 83%.

Group of orthologs #1217. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 S.tridecemlineatus:87

L0PEF7              	100.00%		I3MVI3              	100.00%
                    	       		I3NDT3              	93.17%
                    	       		I3N5A1              	39.75%
Bootstrap support for L0PEF7 as seed ortholog is 100%.
Bootstrap support for I3MVI3 as seed ortholog is 100%.

Group of orthologs #1218. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 S.tridecemlineatus:21

L0P8W8              	100.00%		I3NBX5              	100.00%
L0P9K5              	55.79%		
Bootstrap support for L0P8W8 as seed ortholog is 100%.
Bootstrap support for I3NBX5 as seed ortholog is 76%.

Group of orthologs #1219. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:41 S.tridecemlineatus:87

L0P9G4              	100.00%		I3M401              	100.00%
Bootstrap support for L0P9G4 as seed ortholog is 88%.
Bootstrap support for I3M401 as seed ortholog is 100%.

Group of orthologs #1220. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 S.tridecemlineatus:87

L0P7V3              	100.00%		I3M7M1              	100.00%
Bootstrap support for L0P7V3 as seed ortholog is 100%.
Bootstrap support for I3M7M1 as seed ortholog is 100%.

Group of orthologs #1221. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 S.tridecemlineatus:87

L0P8B5              	100.00%		I3M860              	100.00%
Bootstrap support for L0P8B5 as seed ortholog is 100%.
Bootstrap support for I3M860 as seed ortholog is 100%.

Group of orthologs #1222. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 S.tridecemlineatus:87

L0P8Z4              	100.00%		I3MAF0              	100.00%
Bootstrap support for L0P8Z4 as seed ortholog is 100%.
Bootstrap support for I3MAF0 as seed ortholog is 100%.

Group of orthologs #1223. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 S.tridecemlineatus:87

L0PCV9              	100.00%		I3MA18              	100.00%
Bootstrap support for L0PCV9 as seed ortholog is 100%.
Bootstrap support for I3MA18 as seed ortholog is 100%.

Group of orthologs #1224. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 S.tridecemlineatus:87

L0PFM9              	100.00%		I3M8G9              	100.00%
Bootstrap support for L0PFM9 as seed ortholog is 100%.
Bootstrap support for I3M8G9 as seed ortholog is 100%.

Group of orthologs #1225. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 S.tridecemlineatus:87

L0PBU9              	100.00%		I3MJJ6              	100.00%
Bootstrap support for L0PBU9 as seed ortholog is 100%.
Bootstrap support for I3MJJ6 as seed ortholog is 100%.

Group of orthologs #1226. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 S.tridecemlineatus:10

L0PHI9              	100.00%		I3M3Y2              	100.00%
                    	       		I3N6T7              	33.54%
                    	       		I3MY61              	17.38%
                    	       		I3M7R4              	10.02%
                    	       		I3MHT8              	9.30%
                    	       		I3NBV8              	8.90%
                    	       		I3N111              	8.59%
                    	       		I3M6J3              	8.49%
                    	       		I3MZ14              	8.49%
                    	       		I3MHD5              	8.38%
                    	       		I3M4L7              	7.77%
                    	       		I3M7S8              	7.16%
                    	       		I3N2I2              	7.16%
                    	       		I3NA80              	6.75%
                    	       		I3LWW2              	6.54%
                    	       		I3MPM9              	6.54%
                    	       		I3LXG0              	5.93%
                    	       		I3ND20              	5.42%
                    	       		I3M4S3              	5.42%
                    	       		I3N5A6              	5.32%
                    	       		I3M1P6              	5.21%
                    	       		I3N1S2              	5.11%
Bootstrap support for L0PHI9 as seed ortholog is 100%.
Bootstrap support for I3M3Y2 as seed ortholog is 73%.
Alternative seed ortholog is I3MQC7 (10 bits away from this cluster)

Group of orthologs #1227. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 S.tridecemlineatus:86

L0P887              	100.00%		I3MXI4              	100.00%
                    	       		I3M5W3              	29.41%
Bootstrap support for L0P887 as seed ortholog is 100%.
Bootstrap support for I3MXI4 as seed ortholog is 100%.

Group of orthologs #1228. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 S.tridecemlineatus:86

L0PHH5              	100.00%		I3N8B0              	100.00%
                    	       		I3MH29              	32.46%
Bootstrap support for L0PHH5 as seed ortholog is 100%.
Bootstrap support for I3N8B0 as seed ortholog is 100%.

Group of orthologs #1229. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 S.tridecemlineatus:86

L0PAK5              	100.00%		I3NGB9              	100.00%
                    	       		I3MGP7              	37.61%
Bootstrap support for L0PAK5 as seed ortholog is 100%.
Bootstrap support for I3NGB9 as seed ortholog is 100%.

Group of orthologs #1230. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 S.tridecemlineatus:86

L0PA96              	100.00%		I3M171              	100.00%
Bootstrap support for L0PA96 as seed ortholog is 100%.
Bootstrap support for I3M171 as seed ortholog is 100%.

Group of orthologs #1231. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 S.tridecemlineatus:86

L0PFF2              	100.00%		I3LY33              	100.00%
Bootstrap support for L0PFF2 as seed ortholog is 100%.
Bootstrap support for I3LY33 as seed ortholog is 100%.

Group of orthologs #1232. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 S.tridecemlineatus:86

L0PDG4              	100.00%		I3M1W3              	100.00%
Bootstrap support for L0PDG4 as seed ortholog is 100%.
Bootstrap support for I3M1W3 as seed ortholog is 100%.

Group of orthologs #1233. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 S.tridecemlineatus:86

L0PBC9              	100.00%		I3M792              	100.00%
Bootstrap support for L0PBC9 as seed ortholog is 100%.
Bootstrap support for I3M792 as seed ortholog is 100%.

Group of orthologs #1234. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 S.tridecemlineatus:15

L0PEF8              	100.00%		I3MDN6              	100.00%
Bootstrap support for L0PEF8 as seed ortholog is 100%.
Bootstrap support for I3MDN6 as seed ortholog is 64%.
Alternative seed ortholog is I3MPN7 (15 bits away from this cluster)

Group of orthologs #1235. Best score 85 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 S.tridecemlineatus:25

L0PCN8              	100.00%		I3M8K5              	100.00%
                    	       		I3M4F7              	44.39%
                    	       		I3N635              	36.95%
Bootstrap support for L0PCN8 as seed ortholog is 100%.
Bootstrap support for I3M8K5 as seed ortholog is 78%.

Group of orthologs #1236. Best score 85 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 S.tridecemlineatus:85

L0P8U3              	100.00%		I3M577              	100.00%
                    	       		I3MX78              	59.22%
Bootstrap support for L0P8U3 as seed ortholog is 100%.
Bootstrap support for I3M577 as seed ortholog is 100%.

Group of orthologs #1237. Best score 85 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 S.tridecemlineatus:85

L0PFF3              	100.00%		I3M9D7              	100.00%
Bootstrap support for L0PFF3 as seed ortholog is 100%.
Bootstrap support for I3M9D7 as seed ortholog is 100%.

Group of orthologs #1238. Best score 85 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 S.tridecemlineatus:85

L0PG56              	100.00%		I3MGK0              	100.00%
Bootstrap support for L0PG56 as seed ortholog is 100%.
Bootstrap support for I3MGK0 as seed ortholog is 100%.

Group of orthologs #1239. Best score 85 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 S.tridecemlineatus:85

L0PCM3              	100.00%		I3MYE7              	100.00%
Bootstrap support for L0PCM3 as seed ortholog is 100%.
Bootstrap support for I3MYE7 as seed ortholog is 100%.

Group of orthologs #1240. Best score 85 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 S.tridecemlineatus:85

L0P6X4              	100.00%		I3NEL2              	100.00%
Bootstrap support for L0P6X4 as seed ortholog is 100%.
Bootstrap support for I3NEL2 as seed ortholog is 100%.

Group of orthologs #1241. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 S.tridecemlineatus:31

L0PG69              	100.00%		I3N3S4              	100.00%
                    	       		I3MLY0              	76.97%
                    	       		I3MLY5              	72.02%
                    	       		I3N6P6              	65.19%
Bootstrap support for L0PG69 as seed ortholog is 100%.
Bootstrap support for I3N3S4 as seed ortholog is 83%.

Group of orthologs #1242. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 S.tridecemlineatus:84

L0PBP1              	100.00%		I3M3A4              	100.00%
Bootstrap support for L0PBP1 as seed ortholog is 100%.
Bootstrap support for I3M3A4 as seed ortholog is 100%.

Group of orthologs #1243. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 S.tridecemlineatus:84

L0PF93              	100.00%		I3M1N0              	100.00%
Bootstrap support for L0PF93 as seed ortholog is 100%.
Bootstrap support for I3M1N0 as seed ortholog is 100%.

Group of orthologs #1244. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 S.tridecemlineatus:84

L0PEH3              	100.00%		I3MHJ4              	100.00%
Bootstrap support for L0PEH3 as seed ortholog is 100%.
Bootstrap support for I3MHJ4 as seed ortholog is 100%.

Group of orthologs #1245. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 S.tridecemlineatus:84

L0PF50              	100.00%		I3MJC0              	100.00%
Bootstrap support for L0PF50 as seed ortholog is 100%.
Bootstrap support for I3MJC0 as seed ortholog is 100%.

Group of orthologs #1246. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 S.tridecemlineatus:84

L0PBA1              	100.00%		I3NDA6              	100.00%
Bootstrap support for L0PBA1 as seed ortholog is 100%.
Bootstrap support for I3NDA6 as seed ortholog is 100%.

Group of orthologs #1247. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 S.tridecemlineatus:84

L0PAW3              	100.00%		I3NDV0              	100.00%
Bootstrap support for L0PAW3 as seed ortholog is 100%.
Bootstrap support for I3NDV0 as seed ortholog is 100%.

Group of orthologs #1248. Best score 83 bits
Score difference with first non-orthologous sequence - P.jiroveci:83 S.tridecemlineatus:9

L0PA37              	100.00%		I3LXB6              	100.00%
Bootstrap support for L0PA37 as seed ortholog is 100%.
Bootstrap support for I3LXB6 as seed ortholog is 72%.
Alternative seed ortholog is I3MRS6 (9 bits away from this cluster)

Group of orthologs #1249. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 S.tridecemlineatus:82

L0P7G9              	100.00%		I3N4L6              	100.00%
                    	       		I3MDH3              	68.80%
                    	       		I3N6P7              	37.08%
Bootstrap support for L0P7G9 as seed ortholog is 100%.
Bootstrap support for I3N4L6 as seed ortholog is 100%.

Group of orthologs #1250. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 S.tridecemlineatus:82

L0PB51              	100.00%		I3MMB9              	100.00%
                    	       		I3MAB2              	15.72%
Bootstrap support for L0PB51 as seed ortholog is 100%.
Bootstrap support for I3MMB9 as seed ortholog is 100%.

Group of orthologs #1251. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:26 S.tridecemlineatus:82

L0PB92              	100.00%		I3LYY2              	100.00%
Bootstrap support for L0PB92 as seed ortholog is 89%.
Bootstrap support for I3LYY2 as seed ortholog is 100%.

Group of orthologs #1252. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 S.tridecemlineatus:82

L0PAR6              	100.00%		I3MNH6              	100.00%
Bootstrap support for L0PAR6 as seed ortholog is 100%.
Bootstrap support for I3MNH6 as seed ortholog is 100%.

Group of orthologs #1253. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 S.tridecemlineatus:82

L0PBA0              	100.00%		I3MUV9              	100.00%
Bootstrap support for L0PBA0 as seed ortholog is 100%.
Bootstrap support for I3MUV9 as seed ortholog is 100%.

Group of orthologs #1254. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 S.tridecemlineatus:82

L0PFF8              	100.00%		I3MSR6              	100.00%
Bootstrap support for L0PFF8 as seed ortholog is 100%.
Bootstrap support for I3MSR6 as seed ortholog is 100%.

Group of orthologs #1255. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 S.tridecemlineatus:82

L0P7T1              	100.00%		I3N257              	100.00%
Bootstrap support for L0P7T1 as seed ortholog is 100%.
Bootstrap support for I3N257 as seed ortholog is 100%.

Group of orthologs #1256. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 S.tridecemlineatus:82

L0PC72              	100.00%		I3MYY8              	100.00%
Bootstrap support for L0PC72 as seed ortholog is 100%.
Bootstrap support for I3MYY8 as seed ortholog is 100%.

Group of orthologs #1257. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 S.tridecemlineatus:15

L0PDW2              	100.00%		I3LXN7              	100.00%
                    	       		I3M918              	16.88%
Bootstrap support for L0PDW2 as seed ortholog is 100%.
Bootstrap support for I3LXN7 as seed ortholog is 65%.
Alternative seed ortholog is I3MPN7 (15 bits away from this cluster)

Group of orthologs #1258. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 S.tridecemlineatus:15

L0PEL1              	100.00%		I3M6Y1              	100.00%
                    	       		I3MQZ1              	62.85%
Bootstrap support for L0PEL1 as seed ortholog is 100%.
Bootstrap support for I3M6Y1 as seed ortholog is 66%.
Alternative seed ortholog is I3NFF1 (15 bits away from this cluster)

Group of orthologs #1259. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 S.tridecemlineatus:81

L0PEV7              	100.00%		I3MMQ7              	100.00%
                    	       		I3MLH3              	55.99%
Bootstrap support for L0PEV7 as seed ortholog is 100%.
Bootstrap support for I3MMQ7 as seed ortholog is 100%.

Group of orthologs #1260. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 S.tridecemlineatus:81

L0P954              	100.00%		I3MBU2              	100.00%
Bootstrap support for L0P954 as seed ortholog is 100%.
Bootstrap support for I3MBU2 as seed ortholog is 100%.

Group of orthologs #1261. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 S.tridecemlineatus:81

L0P7C7              	100.00%		I3MHP5              	100.00%
Bootstrap support for L0P7C7 as seed ortholog is 100%.
Bootstrap support for I3MHP5 as seed ortholog is 100%.

Group of orthologs #1262. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 S.tridecemlineatus:81

L0PDE2              	100.00%		I3MGV4              	100.00%
Bootstrap support for L0PDE2 as seed ortholog is 100%.
Bootstrap support for I3MGV4 as seed ortholog is 100%.

Group of orthologs #1263. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 S.tridecemlineatus:81

L0PFH8              	100.00%		I3MMU2              	100.00%
Bootstrap support for L0PFH8 as seed ortholog is 100%.
Bootstrap support for I3MMU2 as seed ortholog is 100%.

Group of orthologs #1264. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 S.tridecemlineatus:81

L0P9L6              	100.00%		I3MUA9              	100.00%
Bootstrap support for L0P9L6 as seed ortholog is 100%.
Bootstrap support for I3MUA9 as seed ortholog is 100%.

Group of orthologs #1265. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 S.tridecemlineatus:81

L0PE40              	100.00%		I3MQD7              	100.00%
Bootstrap support for L0PE40 as seed ortholog is 100%.
Bootstrap support for I3MQD7 as seed ortholog is 100%.

Group of orthologs #1266. Best score 80 bits
Score difference with first non-orthologous sequence - P.jiroveci:80 S.tridecemlineatus:80

L0PDB5              	100.00%		I3N2T2              	100.00%
                    	       		I3M5Q6              	70.19%
Bootstrap support for L0PDB5 as seed ortholog is 100%.
Bootstrap support for I3N2T2 as seed ortholog is 100%.

Group of orthologs #1267. Best score 80 bits
Score difference with first non-orthologous sequence - P.jiroveci:80 S.tridecemlineatus:80

L0PDS8              	100.00%		I3MMK7              	100.00%
Bootstrap support for L0PDS8 as seed ortholog is 100%.
Bootstrap support for I3MMK7 as seed ortholog is 100%.

Group of orthologs #1268. Best score 80 bits
Score difference with first non-orthologous sequence - P.jiroveci:80 S.tridecemlineatus:80

L0PAP8              	100.00%		I3MQV3              	100.00%
Bootstrap support for L0PAP8 as seed ortholog is 100%.
Bootstrap support for I3MQV3 as seed ortholog is 100%.

Group of orthologs #1269. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 S.tridecemlineatus:79

L0PBK6              	100.00%		I3MLS0              	100.00%
                    	       		I3MLS5              	58.18%
                    	       		I3MLT2              	57.04%
                    	       		I3M0I5              	54.34%
                    	       		I3MP24              	53.63%
                    	       		I3M2S6              	51.92%
                    	       		I3NBX7              	40.97%
                    	       		I3NDU9              	40.83%
                    	       		I3NHS4              	38.83%
                    	       		I3MX89              	36.84%
                    	       		I3M4H0              	19.77%
                    	       		I3M9E7              	16.64%
                    	       		I3NF24              	5.41%
                    	       		I3NHE5              	5.41%
                    	       		I3NER5              	5.41%
Bootstrap support for L0PBK6 as seed ortholog is 100%.
Bootstrap support for I3MLS0 as seed ortholog is 100%.

Group of orthologs #1270. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 S.tridecemlineatus:26

L0PCE5              	100.00%		I3M6N4              	100.00%
                    	       		I3LYV2              	42.86%
Bootstrap support for L0PCE5 as seed ortholog is 100%.
Bootstrap support for I3M6N4 as seed ortholog is 81%.

Group of orthologs #1271. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 S.tridecemlineatus:79

L0P8R9              	100.00%		I3MBD2              	100.00%
                    	       		I3N5X1              	46.22%
Bootstrap support for L0P8R9 as seed ortholog is 100%.
Bootstrap support for I3MBD2 as seed ortholog is 100%.

Group of orthologs #1272. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 S.tridecemlineatus:79

L0P9T3              	100.00%		I3M1A3              	100.00%
Bootstrap support for L0P9T3 as seed ortholog is 100%.
Bootstrap support for I3M1A3 as seed ortholog is 100%.

Group of orthologs #1273. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:15 S.tridecemlineatus:79

L0PAT8              	100.00%		I3M1T0              	100.00%
Bootstrap support for L0PAT8 as seed ortholog is 73%.
Alternative seed ortholog is L0PEV0 (15 bits away from this cluster)
Bootstrap support for I3M1T0 as seed ortholog is 100%.

Group of orthologs #1274. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 S.tridecemlineatus:79

L0PD90              	100.00%		I3MDH7              	100.00%
Bootstrap support for L0PD90 as seed ortholog is 100%.
Bootstrap support for I3MDH7 as seed ortholog is 100%.

Group of orthologs #1275. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 S.tridecemlineatus:79

L0PGX1              	100.00%		I3MAC1              	100.00%
Bootstrap support for L0PGX1 as seed ortholog is 100%.
Bootstrap support for I3MAC1 as seed ortholog is 100%.

Group of orthologs #1276. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 S.tridecemlineatus:79

L0PED2              	100.00%		I3MK91              	100.00%
Bootstrap support for L0PED2 as seed ortholog is 100%.
Bootstrap support for I3MK91 as seed ortholog is 100%.

Group of orthologs #1277. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 S.tridecemlineatus:79

L0PEZ5              	100.00%		I3MNZ5              	100.00%
Bootstrap support for L0PEZ5 as seed ortholog is 100%.
Bootstrap support for I3MNZ5 as seed ortholog is 100%.

Group of orthologs #1278. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 S.tridecemlineatus:78

L0PFL2              	100.00%		I3MAU2              	100.00%
                    	       		I3NDU7              	97.40%
Bootstrap support for L0PFL2 as seed ortholog is 100%.
Bootstrap support for I3MAU2 as seed ortholog is 100%.

Group of orthologs #1279. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 S.tridecemlineatus:78

L0PIN1              	100.00%		I3MML3              	100.00%
L0PDW7              	48.39%		
Bootstrap support for L0PIN1 as seed ortholog is 100%.
Bootstrap support for I3MML3 as seed ortholog is 100%.

Group of orthologs #1280. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 S.tridecemlineatus:78

L0P8D6              	100.00%		I3M7R2              	100.00%
Bootstrap support for L0P8D6 as seed ortholog is 100%.
Bootstrap support for I3M7R2 as seed ortholog is 100%.

Group of orthologs #1281. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 S.tridecemlineatus:78

L0PDC5              	100.00%		I3MEI9              	100.00%
Bootstrap support for L0PDC5 as seed ortholog is 100%.
Bootstrap support for I3MEI9 as seed ortholog is 100%.

Group of orthologs #1282. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 S.tridecemlineatus:78

L0PAD6              	100.00%		I3MND8              	100.00%
Bootstrap support for L0PAD6 as seed ortholog is 100%.
Bootstrap support for I3MND8 as seed ortholog is 100%.

Group of orthologs #1283. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 S.tridecemlineatus:78

L0PCX6              	100.00%		I3MYY0              	100.00%
Bootstrap support for L0PCX6 as seed ortholog is 100%.
Bootstrap support for I3MYY0 as seed ortholog is 100%.

Group of orthologs #1284. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 S.tridecemlineatus:78

L0PEG8              	100.00%		I3N095              	100.00%
Bootstrap support for L0PEG8 as seed ortholog is 100%.
Bootstrap support for I3N095 as seed ortholog is 100%.

Group of orthologs #1285. Best score 77 bits
Score difference with first non-orthologous sequence - P.jiroveci:77 S.tridecemlineatus:77

L0PB39              	100.00%		I3NCY3              	100.00%
                    	       		I3MYY2              	52.81%
Bootstrap support for L0PB39 as seed ortholog is 100%.
Bootstrap support for I3NCY3 as seed ortholog is 100%.

Group of orthologs #1286. Best score 77 bits
Score difference with first non-orthologous sequence - P.jiroveci:77 S.tridecemlineatus:77

L0PBU2              	100.00%		I3M168              	100.00%
Bootstrap support for L0PBU2 as seed ortholog is 100%.
Bootstrap support for I3M168 as seed ortholog is 100%.

Group of orthologs #1287. Best score 77 bits
Score difference with first non-orthologous sequence - P.jiroveci:77 S.tridecemlineatus:77

L0PEC4              	100.00%		I3LZ14              	100.00%
Bootstrap support for L0PEC4 as seed ortholog is 100%.
Bootstrap support for I3LZ14 as seed ortholog is 100%.

Group of orthologs #1288. Best score 77 bits
Score difference with first non-orthologous sequence - P.jiroveci:77 S.tridecemlineatus:77

L0P988              	100.00%		I3ML16              	100.00%
Bootstrap support for L0P988 as seed ortholog is 100%.
Bootstrap support for I3ML16 as seed ortholog is 100%.

Group of orthologs #1289. Best score 77 bits
Score difference with first non-orthologous sequence - P.jiroveci:77 S.tridecemlineatus:77

L0P745              	100.00%		I3NG59              	100.00%
Bootstrap support for L0P745 as seed ortholog is 100%.
Bootstrap support for I3NG59 as seed ortholog is 100%.

Group of orthologs #1290. Best score 77 bits
Score difference with first non-orthologous sequence - P.jiroveci:19 S.tridecemlineatus:77

L0PIV0              	100.00%		I3N954              	100.00%
Bootstrap support for L0PIV0 as seed ortholog is 83%.
Bootstrap support for I3N954 as seed ortholog is 100%.

Group of orthologs #1291. Best score 76 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 S.tridecemlineatus:76

L0P883              	100.00%		I3N6B3              	100.00%
                    	       		I3NDF4              	80.49%
Bootstrap support for L0P883 as seed ortholog is 100%.
Bootstrap support for I3N6B3 as seed ortholog is 100%.

Group of orthologs #1292. Best score 76 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 S.tridecemlineatus:76

L0P9K1              	100.00%		I3MJL0              	100.00%
Bootstrap support for L0P9K1 as seed ortholog is 100%.
Bootstrap support for I3MJL0 as seed ortholog is 100%.

Group of orthologs #1293. Best score 76 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 S.tridecemlineatus:76

L0PAF5              	100.00%		I3MJ08              	100.00%
Bootstrap support for L0PAF5 as seed ortholog is 100%.
Bootstrap support for I3MJ08 as seed ortholog is 100%.

Group of orthologs #1294. Best score 76 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 S.tridecemlineatus:76

L0PAS9              	100.00%		I3MZF7              	100.00%
Bootstrap support for L0PAS9 as seed ortholog is 100%.
Bootstrap support for I3MZF7 as seed ortholog is 100%.

Group of orthologs #1295. Best score 76 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 S.tridecemlineatus:76

L0PGW3              	100.00%		I3N2N7              	100.00%
Bootstrap support for L0PGW3 as seed ortholog is 100%.
Bootstrap support for I3N2N7 as seed ortholog is 100%.

Group of orthologs #1296. Best score 76 bits
Score difference with first non-orthologous sequence - P.jiroveci:29 S.tridecemlineatus:76

L0PG11              	100.00%		I3N917              	100.00%
Bootstrap support for L0PG11 as seed ortholog is 79%.
Bootstrap support for I3N917 as seed ortholog is 100%.

Group of orthologs #1297. Best score 75 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 S.tridecemlineatus:75

L0PDF0              	100.00%		I3N8J9              	100.00%
                    	       		I3NHX2              	55.30%
                    	       		I3MTM7              	8.53%
                    	       		I3NG81              	7.49%
Bootstrap support for L0PDF0 as seed ortholog is 100%.
Bootstrap support for I3N8J9 as seed ortholog is 100%.

Group of orthologs #1298. Best score 75 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 S.tridecemlineatus:75

L0PAV0              	100.00%		I3LXA7              	100.00%
Bootstrap support for L0PAV0 as seed ortholog is 100%.
Bootstrap support for I3LXA7 as seed ortholog is 100%.

Group of orthologs #1299. Best score 75 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 S.tridecemlineatus:75

L0PFR5              	100.00%		I3MLS7              	100.00%
Bootstrap support for L0PFR5 as seed ortholog is 100%.
Bootstrap support for I3MLS7 as seed ortholog is 100%.

Group of orthologs #1300. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 S.tridecemlineatus:74

L0PAD3              	100.00%		I3LYT9              	100.00%
                    	       		I3LX13              	76.14%
                    	       		I3ME23              	33.29%
                    	       		I3N023              	32.86%
                    	       		I3N6T3              	32.14%
                    	       		I3M0B2              	11.14%
                    	       		I3MCZ4              	6.71%
                    	       		I3NFK7              	6.57%
                    	       		I3NGL6              	6.29%
Bootstrap support for L0PAD3 as seed ortholog is 100%.
Bootstrap support for I3LYT9 as seed ortholog is 100%.

Group of orthologs #1301. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 S.tridecemlineatus:74

L0P7K1              	100.00%		I3MUI9              	100.00%
                    	       		I3MLG9              	84.43%
Bootstrap support for L0P7K1 as seed ortholog is 100%.
Bootstrap support for I3MUI9 as seed ortholog is 100%.

Group of orthologs #1302. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 S.tridecemlineatus:74

L0PI79              	100.00%		I3N1C4              	100.00%
                    	       		I3MRV7              	49.91%
Bootstrap support for L0PI79 as seed ortholog is 100%.
Bootstrap support for I3N1C4 as seed ortholog is 100%.

Group of orthologs #1303. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 S.tridecemlineatus:74

L0PCB6              	100.00%		I3MDB6              	100.00%
Bootstrap support for L0PCB6 as seed ortholog is 100%.
Bootstrap support for I3MDB6 as seed ortholog is 100%.

Group of orthologs #1304. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 S.tridecemlineatus:74

L0PFK4              	100.00%		I3MLC8              	100.00%
Bootstrap support for L0PFK4 as seed ortholog is 100%.
Bootstrap support for I3MLC8 as seed ortholog is 100%.

Group of orthologs #1305. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 S.tridecemlineatus:74

L0P7Y1              	100.00%		I3N288              	100.00%
Bootstrap support for L0P7Y1 as seed ortholog is 100%.
Bootstrap support for I3N288 as seed ortholog is 100%.

Group of orthologs #1306. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 S.tridecemlineatus:74

L0PE66              	100.00%		I3MWE9              	100.00%
Bootstrap support for L0PE66 as seed ortholog is 100%.
Bootstrap support for I3MWE9 as seed ortholog is 100%.

Group of orthologs #1307. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 S.tridecemlineatus:74

L0PDR4              	100.00%		I3MZ69              	100.00%
Bootstrap support for L0PDR4 as seed ortholog is 100%.
Bootstrap support for I3MZ69 as seed ortholog is 100%.

Group of orthologs #1308. Best score 73 bits
Score difference with first non-orthologous sequence - P.jiroveci:73 S.tridecemlineatus:73

L0P9X8              	100.00%		I3N2I4              	100.00%
                    	       		I3MA22              	13.63%
Bootstrap support for L0P9X8 as seed ortholog is 100%.
Bootstrap support for I3N2I4 as seed ortholog is 100%.

Group of orthologs #1309. Best score 73 bits
Score difference with first non-orthologous sequence - P.jiroveci:73 S.tridecemlineatus:73

L0PG35              	100.00%		I3NCR1              	100.00%
Bootstrap support for L0PG35 as seed ortholog is 100%.
Bootstrap support for I3NCR1 as seed ortholog is 100%.

Group of orthologs #1310. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 S.tridecemlineatus:72

L0P724              	100.00%		I3M212              	100.00%
Bootstrap support for L0P724 as seed ortholog is 100%.
Bootstrap support for I3M212 as seed ortholog is 100%.

Group of orthologs #1311. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 S.tridecemlineatus:72

L0PAT1              	100.00%		I3LYZ4              	100.00%
Bootstrap support for L0PAT1 as seed ortholog is 100%.
Bootstrap support for I3LYZ4 as seed ortholog is 100%.

Group of orthologs #1312. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:15 S.tridecemlineatus:14

L0PFB0              	100.00%		I3M0Q4              	100.00%
Bootstrap support for L0PFB0 as seed ortholog is 61%.
Alternative seed ortholog is L0PGK1 (15 bits away from this cluster)
Bootstrap support for I3M0Q4 as seed ortholog is 60%.
Alternative seed ortholog is I3MRX8 (14 bits away from this cluster)

Group of orthologs #1313. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 S.tridecemlineatus:72

L0PBR0              	100.00%		I3MMV9              	100.00%
Bootstrap support for L0PBR0 as seed ortholog is 100%.
Bootstrap support for I3MMV9 as seed ortholog is 100%.

Group of orthologs #1314. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 S.tridecemlineatus:72

L0PEC9              	100.00%		I3MZU1              	100.00%
Bootstrap support for L0PEC9 as seed ortholog is 100%.
Bootstrap support for I3MZU1 as seed ortholog is 100%.

Group of orthologs #1315. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 S.tridecemlineatus:72

L0PCZ0              	100.00%		I3NDB5              	100.00%
Bootstrap support for L0PCZ0 as seed ortholog is 100%.
Bootstrap support for I3NDB5 as seed ortholog is 100%.

Group of orthologs #1316. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 S.tridecemlineatus:71

L0PBP5              	100.00%		I3NDU3              	100.00%
                    	       		I3MV62              	73.43%
                    	       		I3M7A3              	48.79%
Bootstrap support for L0PBP5 as seed ortholog is 100%.
Bootstrap support for I3NDU3 as seed ortholog is 100%.

Group of orthologs #1317. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 S.tridecemlineatus:71

L0PAF1              	100.00%		I3MI16              	100.00%
Bootstrap support for L0PAF1 as seed ortholog is 100%.
Bootstrap support for I3MI16 as seed ortholog is 100%.

Group of orthologs #1318. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 S.tridecemlineatus:71

L0PFF1              	100.00%		I3MD52              	100.00%
Bootstrap support for L0PFF1 as seed ortholog is 100%.
Bootstrap support for I3MD52 as seed ortholog is 100%.

Group of orthologs #1319. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 S.tridecemlineatus:71

L0PE38              	100.00%		I3NFG5              	100.00%
Bootstrap support for L0PE38 as seed ortholog is 100%.
Bootstrap support for I3NFG5 as seed ortholog is 100%.

Group of orthologs #1320. Best score 70 bits
Score difference with first non-orthologous sequence - P.jiroveci:70 S.tridecemlineatus:70

L0PFN7              	100.00%		I3MNA8              	100.00%
Bootstrap support for L0PFN7 as seed ortholog is 100%.
Bootstrap support for I3MNA8 as seed ortholog is 100%.

Group of orthologs #1321. Best score 70 bits
Score difference with first non-orthologous sequence - P.jiroveci:70 S.tridecemlineatus:70

L0PBK0              	100.00%		I3MXG9              	100.00%
Bootstrap support for L0PBK0 as seed ortholog is 100%.
Bootstrap support for I3MXG9 as seed ortholog is 100%.

Group of orthologs #1322. Best score 69 bits
Score difference with first non-orthologous sequence - P.jiroveci:69 S.tridecemlineatus:69

L0PFT1              	100.00%		I3MRY1              	100.00%
                    	       		I3MML8              	93.70%
                    	       		I3M452              	31.11%
                    	       		I3MG92              	14.44%
                    	       		I3LW79              	12.22%
                    	       		I3LXN2              	10.37%
                    	       		I3M980              	8.89%
Bootstrap support for L0PFT1 as seed ortholog is 100%.
Bootstrap support for I3MRY1 as seed ortholog is 100%.

Group of orthologs #1323. Best score 69 bits
Score difference with first non-orthologous sequence - P.jiroveci:12 S.tridecemlineatus:69

L0PB95              	100.00%		I3LYY3              	100.00%
Bootstrap support for L0PB95 as seed ortholog is 64%.
Alternative seed ortholog is L0P7Y0 (12 bits away from this cluster)
Bootstrap support for I3LYY3 as seed ortholog is 100%.

Group of orthologs #1324. Best score 69 bits
Score difference with first non-orthologous sequence - P.jiroveci:69 S.tridecemlineatus:69

L0PA11              	100.00%		I3MCG9              	100.00%
Bootstrap support for L0PA11 as seed ortholog is 100%.
Bootstrap support for I3MCG9 as seed ortholog is 100%.

Group of orthologs #1325. Best score 69 bits
Score difference with first non-orthologous sequence - P.jiroveci:69 S.tridecemlineatus:69

L0P9X6              	100.00%		I3N4F1              	100.00%
Bootstrap support for L0P9X6 as seed ortholog is 100%.
Bootstrap support for I3N4F1 as seed ortholog is 100%.

Group of orthologs #1326. Best score 69 bits
Score difference with first non-orthologous sequence - P.jiroveci:69 S.tridecemlineatus:69

L0PCJ4              	100.00%		I3N6P0              	100.00%
Bootstrap support for L0PCJ4 as seed ortholog is 100%.
Bootstrap support for I3N6P0 as seed ortholog is 100%.

Group of orthologs #1327. Best score 69 bits
Score difference with first non-orthologous sequence - P.jiroveci:69 S.tridecemlineatus:69

L0PEX2              	100.00%		I3NCV5              	100.00%
Bootstrap support for L0PEX2 as seed ortholog is 100%.
Bootstrap support for I3NCV5 as seed ortholog is 100%.

Group of orthologs #1328. Best score 68 bits
Score difference with first non-orthologous sequence - P.jiroveci:68 S.tridecemlineatus:68

L0PAE3              	100.00%		I3M6Z9              	100.00%
Bootstrap support for L0PAE3 as seed ortholog is 100%.
Bootstrap support for I3M6Z9 as seed ortholog is 100%.

Group of orthologs #1329. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 S.tridecemlineatus:67

L0PE88              	100.00%		I3NF12              	100.00%
                    	       		I3ML82              	37.49%
                    	       		I3MN81              	26.69%
                    	       		I3MR55              	24.67%
Bootstrap support for L0PE88 as seed ortholog is 100%.
Bootstrap support for I3NF12 as seed ortholog is 100%.

Group of orthologs #1330. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 S.tridecemlineatus:67

L0PAY8              	100.00%		I3LX56              	100.00%
Bootstrap support for L0PAY8 as seed ortholog is 100%.
Bootstrap support for I3LX56 as seed ortholog is 100%.

Group of orthologs #1331. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 S.tridecemlineatus:67

L0PA21              	100.00%		I3MCH6              	100.00%
Bootstrap support for L0PA21 as seed ortholog is 100%.
Bootstrap support for I3MCH6 as seed ortholog is 100%.

Group of orthologs #1332. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:9 S.tridecemlineatus:67

L0PGG4              	100.00%		I3MCT4              	100.00%
Bootstrap support for L0PGG4 as seed ortholog is 73%.
Alternative seed ortholog is L0PB27 (9 bits away from this cluster)
Bootstrap support for I3MCT4 as seed ortholog is 100%.

Group of orthologs #1333. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 S.tridecemlineatus:67

L0PDW6              	100.00%		I3MM91              	100.00%
Bootstrap support for L0PDW6 as seed ortholog is 100%.
Bootstrap support for I3MM91 as seed ortholog is 100%.

Group of orthologs #1334. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 S.tridecemlineatus:67

L0PF64              	100.00%		I3MYV3              	100.00%
Bootstrap support for L0PF64 as seed ortholog is 100%.
Bootstrap support for I3MYV3 as seed ortholog is 100%.

Group of orthologs #1335. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 S.tridecemlineatus:67

L0PE59              	100.00%		I3NFT3              	100.00%
Bootstrap support for L0PE59 as seed ortholog is 100%.
Bootstrap support for I3NFT3 as seed ortholog is 100%.

Group of orthologs #1336. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 S.tridecemlineatus:66

L0PBY4              	100.00%		I3M187              	100.00%
Bootstrap support for L0PBY4 as seed ortholog is 100%.
Bootstrap support for I3M187 as seed ortholog is 100%.

Group of orthologs #1337. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 S.tridecemlineatus:21

L0P881              	100.00%		I3MBD0              	100.00%
Bootstrap support for L0P881 as seed ortholog is 100%.
Bootstrap support for I3MBD0 as seed ortholog is 89%.

Group of orthologs #1338. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 S.tridecemlineatus:66

L0PEH0              	100.00%		I3MX05              	100.00%
Bootstrap support for L0PEH0 as seed ortholog is 100%.
Bootstrap support for I3MX05 as seed ortholog is 100%.

Group of orthologs #1339. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 S.tridecemlineatus:66

L0PD91              	100.00%		I3N0V0              	100.00%
Bootstrap support for L0PD91 as seed ortholog is 100%.
Bootstrap support for I3N0V0 as seed ortholog is 100%.

Group of orthologs #1340. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 S.tridecemlineatus:66

L0PAG5              	100.00%		I3N7S8              	100.00%
Bootstrap support for L0PAG5 as seed ortholog is 100%.
Bootstrap support for I3N7S8 as seed ortholog is 100%.

Group of orthologs #1341. Best score 65 bits
Score difference with first non-orthologous sequence - P.jiroveci:65 S.tridecemlineatus:6

L0P8G6              	100.00%		I3M0D3              	100.00%
                    	       		I3M436              	7.88%
                    	       		I3MUB9              	5.47%
Bootstrap support for L0P8G6 as seed ortholog is 100%.
Bootstrap support for I3M0D3 as seed ortholog is 57%.
Alternative seed ortholog is I3M9N7 (6 bits away from this cluster)

Group of orthologs #1342. Best score 65 bits
Score difference with first non-orthologous sequence - P.jiroveci:65 S.tridecemlineatus:65

L0PFS6              	100.00%		I3MAC4              	100.00%
                    	       		I3N3T1              	48.01%
Bootstrap support for L0PFS6 as seed ortholog is 100%.
Bootstrap support for I3MAC4 as seed ortholog is 100%.

Group of orthologs #1343. Best score 65 bits
Score difference with first non-orthologous sequence - P.jiroveci:65 S.tridecemlineatus:65

L0PBB9              	100.00%		I3N7K6              	100.00%
                    	       		I3M1E9              	52.80%
Bootstrap support for L0PBB9 as seed ortholog is 100%.
Bootstrap support for I3N7K6 as seed ortholog is 100%.

Group of orthologs #1344. Best score 65 bits
Score difference with first non-orthologous sequence - P.jiroveci:65 S.tridecemlineatus:65

L0PF02              	100.00%		I3MAT9              	100.00%
Bootstrap support for L0PF02 as seed ortholog is 100%.
Bootstrap support for I3MAT9 as seed ortholog is 100%.

Group of orthologs #1345. Best score 65 bits
Score difference with first non-orthologous sequence - P.jiroveci:65 S.tridecemlineatus:65

L0PBW6              	100.00%		I3MRQ0              	100.00%
Bootstrap support for L0PBW6 as seed ortholog is 100%.
Bootstrap support for I3MRQ0 as seed ortholog is 100%.

Group of orthologs #1346. Best score 65 bits
Score difference with first non-orthologous sequence - P.jiroveci:65 S.tridecemlineatus:65

L0PD96              	100.00%		I3MUZ1              	100.00%
Bootstrap support for L0PD96 as seed ortholog is 100%.
Bootstrap support for I3MUZ1 as seed ortholog is 100%.

Group of orthologs #1347. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 S.tridecemlineatus:64

L0PAZ6              	100.00%		I3M948              	100.00%
                    	       		I3N2K3              	53.08%
                    	       		I3N121              	37.60%
Bootstrap support for L0PAZ6 as seed ortholog is 100%.
Bootstrap support for I3M948 as seed ortholog is 100%.

Group of orthologs #1348. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 S.tridecemlineatus:64

L0P9R4              	100.00%		I3MRH1              	100.00%
Bootstrap support for L0P9R4 as seed ortholog is 100%.
Bootstrap support for I3MRH1 as seed ortholog is 100%.

Group of orthologs #1349. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 S.tridecemlineatus:64

L0PEU8              	100.00%		I3MR29              	100.00%
Bootstrap support for L0PEU8 as seed ortholog is 100%.
Bootstrap support for I3MR29 as seed ortholog is 100%.

Group of orthologs #1350. Best score 63 bits
Score difference with first non-orthologous sequence - P.jiroveci:63 S.tridecemlineatus:63

L0PF40              	100.00%		I3MCI3              	100.00%
                    	       		I3LXP9              	9.18%
Bootstrap support for L0PF40 as seed ortholog is 100%.
Bootstrap support for I3MCI3 as seed ortholog is 100%.

Group of orthologs #1351. Best score 63 bits
Score difference with first non-orthologous sequence - P.jiroveci:63 S.tridecemlineatus:63

L0P9V1              	100.00%		I3LZ61              	100.00%
Bootstrap support for L0P9V1 as seed ortholog is 100%.
Bootstrap support for I3LZ61 as seed ortholog is 100%.

Group of orthologs #1352. Best score 63 bits
Score difference with first non-orthologous sequence - P.jiroveci:63 S.tridecemlineatus:63

L0PFH5              	100.00%		I3MHZ6              	100.00%
Bootstrap support for L0PFH5 as seed ortholog is 100%.
Bootstrap support for I3MHZ6 as seed ortholog is 100%.

Group of orthologs #1353. Best score 63 bits
Score difference with first non-orthologous sequence - P.jiroveci:63 S.tridecemlineatus:63

L0PE07              	100.00%		I3MPA7              	100.00%
Bootstrap support for L0PE07 as seed ortholog is 100%.
Bootstrap support for I3MPA7 as seed ortholog is 100%.

Group of orthologs #1354. Best score 62 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 S.tridecemlineatus:62

L0PAE0              	100.00%		I3LWJ6              	100.00%
                    	       		I3M1H1              	12.06%
                    	       		I3MPK2              	11.57%
                    	       		I3LZZ5              	10.84%
                    	       		I3MZ98              	10.48%
                    	       		I3MXJ1              	10.11%
Bootstrap support for L0PAE0 as seed ortholog is 100%.
Bootstrap support for I3LWJ6 as seed ortholog is 100%.

Group of orthologs #1355. Best score 62 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 S.tridecemlineatus:62

L0PAI3              	100.00%		I3MJD2              	100.00%
                    	       		I3N4W6              	56.73%
                    	       		I3NE84              	42.31%
Bootstrap support for L0PAI3 as seed ortholog is 100%.
Bootstrap support for I3MJD2 as seed ortholog is 100%.

Group of orthologs #1356. Best score 62 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 S.tridecemlineatus:62

L0PEY1              	100.00%		I3LZU7              	100.00%
Bootstrap support for L0PEY1 as seed ortholog is 100%.
Bootstrap support for I3LZU7 as seed ortholog is 100%.

Group of orthologs #1357. Best score 62 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 S.tridecemlineatus:62

L0PBS8              	100.00%		I3N914              	100.00%
Bootstrap support for L0PBS8 as seed ortholog is 100%.
Bootstrap support for I3N914 as seed ortholog is 100%.

Group of orthologs #1358. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 S.tridecemlineatus:61

L0PA64              	100.00%		I3N9X3              	100.00%
                    	       		I3MEG2              	36.26%
                    	       		I3NEW4              	7.63%
                    	       		I3MI46              	7.38%
                    	       		I3N315              	5.47%
                    	       		I3MXC0              	5.34%
                    	       		I3M315              	5.34%
                    	       		I3MIE3              	5.22%
Bootstrap support for L0PA64 as seed ortholog is 100%.
Bootstrap support for I3N9X3 as seed ortholog is 100%.

Group of orthologs #1359. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 S.tridecemlineatus:61

L0PGG5              	100.00%		I3N474              	100.00%
L0PC31              	100.00%		I3MF43              	100.00%
                    	       		I3N036              	6.04%
Bootstrap support for L0PGG5 as seed ortholog is 100%.
Bootstrap support for L0PC31 as seed ortholog is 100%.
Bootstrap support for I3N474 as seed ortholog is 100%.
Bootstrap support for I3MF43 as seed ortholog is 100%.

Group of orthologs #1360. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 S.tridecemlineatus:61

L0PC69              	100.00%		I3M7F2              	100.00%
                    	       		I3MSZ4              	5.29%
                    	       		I3MAZ0              	5.07%
Bootstrap support for L0PC69 as seed ortholog is 100%.
Bootstrap support for I3M7F2 as seed ortholog is 100%.

Group of orthologs #1361. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 S.tridecemlineatus:61

L0P7U7              	100.00%		I3MGG0              	100.00%
                    	       		I3N737              	69.38%
Bootstrap support for L0P7U7 as seed ortholog is 100%.
Bootstrap support for I3MGG0 as seed ortholog is 100%.

Group of orthologs #1362. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 S.tridecemlineatus:61

L0P9W9              	100.00%		I3N2H1              	100.00%
                    	       		I3MQM3              	48.81%
Bootstrap support for L0P9W9 as seed ortholog is 100%.
Bootstrap support for I3N2H1 as seed ortholog is 100%.

Group of orthologs #1363. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 S.tridecemlineatus:61

L0PFE2              	100.00%		I3M5B5              	100.00%
Bootstrap support for L0PFE2 as seed ortholog is 100%.
Bootstrap support for I3M5B5 as seed ortholog is 100%.

Group of orthologs #1364. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 S.tridecemlineatus:61

L0PG83              	100.00%		I3M8Z8              	100.00%
Bootstrap support for L0PG83 as seed ortholog is 100%.
Bootstrap support for I3M8Z8 as seed ortholog is 100%.

Group of orthologs #1365. Best score 60 bits
Score difference with first non-orthologous sequence - P.jiroveci:60 S.tridecemlineatus:60

L0PAP7              	100.00%		I3MEN0              	100.00%
Bootstrap support for L0PAP7 as seed ortholog is 100%.
Bootstrap support for I3MEN0 as seed ortholog is 100%.

Group of orthologs #1366. Best score 60 bits
Score difference with first non-orthologous sequence - P.jiroveci:60 S.tridecemlineatus:60

L0P7Q6              	100.00%		I3MIZ6              	100.00%
Bootstrap support for L0P7Q6 as seed ortholog is 100%.
Bootstrap support for I3MIZ6 as seed ortholog is 100%.

Group of orthologs #1367. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 S.tridecemlineatus:59

L0PB91              	100.00%		I3MQG9              	100.00%
                    	       		I3N8K2              	54.34%
                    	       		I3M246              	38.73%
Bootstrap support for L0PB91 as seed ortholog is 100%.
Bootstrap support for I3MQG9 as seed ortholog is 100%.

Group of orthologs #1368. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 S.tridecemlineatus:59

L0PAE2              	100.00%		I3NEQ8              	100.00%
                    	       		I3MVL3              	45.39%
Bootstrap support for L0PAE2 as seed ortholog is 100%.
Bootstrap support for I3NEQ8 as seed ortholog is 100%.

Group of orthologs #1369. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 S.tridecemlineatus:59

L0P9B7              	100.00%		I3M1R3              	100.00%
Bootstrap support for L0P9B7 as seed ortholog is 100%.
Bootstrap support for I3M1R3 as seed ortholog is 100%.

Group of orthologs #1370. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 S.tridecemlineatus:59

L0PFV5              	100.00%		I3M4Y6              	100.00%
Bootstrap support for L0PFV5 as seed ortholog is 100%.
Bootstrap support for I3M4Y6 as seed ortholog is 100%.

Group of orthologs #1371. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 S.tridecemlineatus:59

L0PFE5              	100.00%		I3MB23              	100.00%
Bootstrap support for L0PFE5 as seed ortholog is 100%.
Bootstrap support for I3MB23 as seed ortholog is 100%.

Group of orthologs #1372. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 S.tridecemlineatus:59

L0P8D1              	100.00%		I3MPB8              	100.00%
Bootstrap support for L0P8D1 as seed ortholog is 100%.
Bootstrap support for I3MPB8 as seed ortholog is 100%.

Group of orthologs #1373. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 S.tridecemlineatus:59

L0PDH5              	100.00%		I3MXU9              	100.00%
Bootstrap support for L0PDH5 as seed ortholog is 100%.
Bootstrap support for I3MXU9 as seed ortholog is 100%.

Group of orthologs #1374. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 S.tridecemlineatus:59

L0PCN6              	100.00%		I3N6P3              	100.00%
Bootstrap support for L0PCN6 as seed ortholog is 100%.
Bootstrap support for I3N6P3 as seed ortholog is 100%.

Group of orthologs #1375. Best score 58 bits
Score difference with first non-orthologous sequence - P.jiroveci:58 S.tridecemlineatus:58

L0PEB6              	100.00%		I3MLR8              	100.00%
                    	       		I3NF98              	37.22%
Bootstrap support for L0PEB6 as seed ortholog is 100%.
Bootstrap support for I3MLR8 as seed ortholog is 100%.

Group of orthologs #1376. Best score 58 bits
Score difference with first non-orthologous sequence - P.jiroveci:58 S.tridecemlineatus:58

L0PGI1              	100.00%		I3MQN7              	100.00%
                    	       		I3LVU5              	23.07%
Bootstrap support for L0PGI1 as seed ortholog is 100%.
Bootstrap support for I3MQN7 as seed ortholog is 100%.

Group of orthologs #1377. Best score 58 bits
Score difference with first non-orthologous sequence - P.jiroveci:58 S.tridecemlineatus:14

L0P8Q3              	100.00%		I3N3U7              	100.00%
Bootstrap support for L0P8Q3 as seed ortholog is 100%.
Bootstrap support for I3N3U7 as seed ortholog is 76%.

Group of orthologs #1378. Best score 57 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 S.tridecemlineatus:57

L0P9P1              	100.00%		I3N873              	100.00%
Bootstrap support for L0P9P1 as seed ortholog is 100%.
Bootstrap support for I3N873 as seed ortholog is 100%.

Group of orthologs #1379. Best score 57 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 S.tridecemlineatus:57

L0PD80              	100.00%		I3NCQ2              	100.00%
Bootstrap support for L0PD80 as seed ortholog is 100%.
Bootstrap support for I3NCQ2 as seed ortholog is 100%.

Group of orthologs #1380. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 S.tridecemlineatus:56

L0PFT6              	100.00%		I3M2T7              	100.00%
L0P6V3              	45.67%		
Bootstrap support for L0PFT6 as seed ortholog is 100%.
Bootstrap support for I3M2T7 as seed ortholog is 100%.

Group of orthologs #1381. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 S.tridecemlineatus:56

L0PAD5              	100.00%		I3M1N2              	100.00%
Bootstrap support for L0PAD5 as seed ortholog is 100%.
Bootstrap support for I3M1N2 as seed ortholog is 100%.

Group of orthologs #1382. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 S.tridecemlineatus:56

L0PBG4              	100.00%		I3MY59              	100.00%
Bootstrap support for L0PBG4 as seed ortholog is 100%.
Bootstrap support for I3MY59 as seed ortholog is 100%.

Group of orthologs #1383. Best score 55 bits
Score difference with first non-orthologous sequence - P.jiroveci:55 S.tridecemlineatus:55

L0PBB5              	100.00%		I3MJ28              	100.00%
                    	       		I3N9R6              	83.52%
                    	       		I3N1M8              	62.01%
                    	       		I3MU12              	57.26%
                    	       		I3LWM5              	54.75%
                    	       		I3M8X3              	52.23%
                    	       		I3MWI2              	23.46%
Bootstrap support for L0PBB5 as seed ortholog is 100%.
Bootstrap support for I3MJ28 as seed ortholog is 100%.

Group of orthologs #1384. Best score 55 bits
Score difference with first non-orthologous sequence - P.jiroveci:55 S.tridecemlineatus:55

L0PGI8              	100.00%		I3MB07              	100.00%
Bootstrap support for L0PGI8 as seed ortholog is 100%.
Bootstrap support for I3MB07 as seed ortholog is 100%.

Group of orthologs #1385. Best score 55 bits
Score difference with first non-orthologous sequence - P.jiroveci:55 S.tridecemlineatus:55

L0PDN1              	100.00%		I3MZW6              	100.00%
Bootstrap support for L0PDN1 as seed ortholog is 100%.
Bootstrap support for I3MZW6 as seed ortholog is 100%.

Group of orthologs #1386. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 S.tridecemlineatus:54

L0P7J7              	100.00%		I3M6D2              	100.00%
                    	       		I3N4V2              	34.32%
Bootstrap support for L0P7J7 as seed ortholog is 100%.
Bootstrap support for I3M6D2 as seed ortholog is 100%.

Group of orthologs #1387. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 S.tridecemlineatus:54

L0P9A3              	100.00%		I3MAD4              	100.00%
                    	       		I3NBD3              	78.83%
Bootstrap support for L0P9A3 as seed ortholog is 100%.
Bootstrap support for I3MAD4 as seed ortholog is 100%.

Group of orthologs #1388. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 S.tridecemlineatus:54

L0PEB3              	100.00%		I3N5L7              	100.00%
                    	       		I3N9Z3              	45.90%
Bootstrap support for L0PEB3 as seed ortholog is 100%.
Bootstrap support for I3N5L7 as seed ortholog is 100%.

Group of orthologs #1389. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 S.tridecemlineatus:54

L0P9U7              	100.00%		I3MB08              	100.00%
Bootstrap support for L0P9U7 as seed ortholog is 100%.
Bootstrap support for I3MB08 as seed ortholog is 100%.

Group of orthologs #1390. Best score 53 bits
Score difference with first non-orthologous sequence - P.jiroveci:53 S.tridecemlineatus:53

L0PAH6              	100.00%		I3M637              	100.00%
Bootstrap support for L0PAH6 as seed ortholog is 100%.
Bootstrap support for I3M637 as seed ortholog is 100%.

Group of orthologs #1391. Best score 53 bits
Score difference with first non-orthologous sequence - P.jiroveci:53 S.tridecemlineatus:53

L0PA67              	100.00%		I3MBG4              	100.00%
Bootstrap support for L0PA67 as seed ortholog is 100%.
Bootstrap support for I3MBG4 as seed ortholog is 100%.

Group of orthologs #1392. Best score 52 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 S.tridecemlineatus:52

L0PE16              	100.00%		I3MEB3              	100.00%
Bootstrap support for L0PE16 as seed ortholog is 100%.
Bootstrap support for I3MEB3 as seed ortholog is 100%.

Group of orthologs #1393. Best score 52 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 S.tridecemlineatus:52

L0PGU4              	100.00%		I3MJE8              	100.00%
Bootstrap support for L0PGU4 as seed ortholog is 100%.
Bootstrap support for I3MJE8 as seed ortholog is 100%.

Group of orthologs #1394. Best score 52 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 S.tridecemlineatus:52

L0P815              	100.00%		I3MYZ2              	100.00%
Bootstrap support for L0P815 as seed ortholog is 100%.
Bootstrap support for I3MYZ2 as seed ortholog is 100%.

Group of orthologs #1395. Best score 52 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 S.tridecemlineatus:52

L0P9L4              	100.00%		I3MXY5              	100.00%
Bootstrap support for L0P9L4 as seed ortholog is 100%.
Bootstrap support for I3MXY5 as seed ortholog is 100%.

Group of orthologs #1396. Best score 51 bits
Score difference with first non-orthologous sequence - P.jiroveci:51 S.tridecemlineatus:51

L0PAQ5              	100.00%		I3LW63              	100.00%
                    	       		I3MB38              	12.95%
Bootstrap support for L0PAQ5 as seed ortholog is 100%.
Bootstrap support for I3LW63 as seed ortholog is 100%.

Group of orthologs #1397. Best score 51 bits
Score difference with first non-orthologous sequence - P.jiroveci:51 S.tridecemlineatus:51

L0PF85              	100.00%		I3M2R3              	100.00%
Bootstrap support for L0PF85 as seed ortholog is 100%.
Bootstrap support for I3M2R3 as seed ortholog is 100%.

Group of orthologs #1398. Best score 50 bits
Score difference with first non-orthologous sequence - P.jiroveci:50 S.tridecemlineatus:50

L0PEE9              	100.00%		I3M2Z6              	100.00%
                    	       		I3N9D4              	100.00%
Bootstrap support for L0PEE9 as seed ortholog is 100%.
Bootstrap support for I3M2Z6 as seed ortholog is 100%.
Bootstrap support for I3N9D4 as seed ortholog is 100%.

Group of orthologs #1399. Best score 50 bits
Score difference with first non-orthologous sequence - P.jiroveci:50 S.tridecemlineatus:50

L0P7X8              	100.00%		I3M238              	100.00%
Bootstrap support for L0P7X8 as seed ortholog is 100%.
Bootstrap support for I3M238 as seed ortholog is 100%.

Group of orthologs #1400. Best score 50 bits
Score difference with first non-orthologous sequence - P.jiroveci:50 S.tridecemlineatus:50

L0PD64              	100.00%		I3M3U3              	100.00%
Bootstrap support for L0PD64 as seed ortholog is 100%.
Bootstrap support for I3M3U3 as seed ortholog is 100%.

Group of orthologs #1401. Best score 49 bits
Score difference with first non-orthologous sequence - P.jiroveci:49 S.tridecemlineatus:49

L0P994              	100.00%		I3N2A4              	100.00%
                    	       		I3MW33              	43.67%
                    	       		I3N1A9              	36.98%
                    	       		I3N4P5              	34.00%
                    	       		I3MEW1              	33.85%
                    	       		I3NFA0              	31.72%
                    	       		I3MN03              	31.44%
                    	       		I3NCI4              	30.87%
                    	       		I3M418              	30.01%
                    	       		I3NBN0              	30.01%
                    	       		I3MCD7              	28.17%
                    	       		I3NH38              	24.04%
                    	       		I3N673              	21.05%
                    	       		I3LXJ2              	16.93%
                    	       		I3MNK4              	16.64%
                    	       		I3MVV6              	15.50%
Bootstrap support for L0P994 as seed ortholog is 100%.
Bootstrap support for I3N2A4 as seed ortholog is 100%.

Group of orthologs #1402. Best score 49 bits
Score difference with first non-orthologous sequence - P.jiroveci:49 S.tridecemlineatus:49

L0PFJ1              	100.00%		I3NBW9              	100.00%
                    	       		I3NFW9              	42.67%
                    	       		I3LXS9              	22.05%
                    	       		I3M8Q8              	20.92%
                    	       		I3NCT3              	20.82%
                    	       		I3M378              	6.15%
Bootstrap support for L0PFJ1 as seed ortholog is 100%.
Bootstrap support for I3NBW9 as seed ortholog is 100%.

Group of orthologs #1403. Best score 49 bits
Score difference with first non-orthologous sequence - P.jiroveci:49 S.tridecemlineatus:5

L0PBX5              	100.00%		I3M7G6              	100.00%
                    	       		I3NGZ7              	7.53%
Bootstrap support for L0PBX5 as seed ortholog is 100%.
Bootstrap support for I3M7G6 as seed ortholog is 49%.
Alternative seed ortholog is I3N553 (5 bits away from this cluster)

Group of orthologs #1404. Best score 49 bits
Score difference with first non-orthologous sequence - P.jiroveci:49 S.tridecemlineatus:49

L0PFN8              	100.00%		I3M9F7              	100.00%
Bootstrap support for L0PFN8 as seed ortholog is 100%.
Bootstrap support for I3M9F7 as seed ortholog is 100%.

Group of orthologs #1405. Best score 49 bits
Score difference with first non-orthologous sequence - P.jiroveci:49 S.tridecemlineatus:49

L0PE69              	100.00%		I3MCR7              	100.00%
Bootstrap support for L0PE69 as seed ortholog is 100%.
Bootstrap support for I3MCR7 as seed ortholog is 100%.

Group of orthologs #1406. Best score 48 bits
Score difference with first non-orthologous sequence - P.jiroveci:48 S.tridecemlineatus:48

L0PGZ4              	100.00%		I3MHI2              	100.00%
Bootstrap support for L0PGZ4 as seed ortholog is 100%.
Bootstrap support for I3MHI2 as seed ortholog is 100%.

Group of orthologs #1407. Best score 48 bits
Score difference with first non-orthologous sequence - P.jiroveci:48 S.tridecemlineatus:48

L0PH50              	100.00%		I3NHP2              	100.00%
Bootstrap support for L0PH50 as seed ortholog is 100%.
Bootstrap support for I3NHP2 as seed ortholog is 100%.

Group of orthologs #1408. Best score 47 bits
Score difference with first non-orthologous sequence - P.jiroveci:47 S.tridecemlineatus:6

L0P9T4              	100.00%		I3NHC5              	12.17%
L0PFA0              	100.00%		I3NGF5              	100.00%
                    	       		I3N4J2              	10.95%
                    	       		I3MYN0              	10.71%
Bootstrap support for L0P9T4 as seed ortholog is 100%.
Bootstrap support for L0PFA0 as seed ortholog is 100%.
Bootstrap support for I3NGF5 as seed ortholog is 35%.
Alternative seed ortholog is I3MZX2 (6 bits away from this cluster)

Group of orthologs #1409. Best score 47 bits
Score difference with first non-orthologous sequence - P.jiroveci:47 S.tridecemlineatus:47

L0PDC1              	100.00%		I3N9H9              	100.00%
L0P831              	86.77%		
Bootstrap support for L0PDC1 as seed ortholog is 100%.
Bootstrap support for I3N9H9 as seed ortholog is 100%.

Group of orthologs #1410. Best score 47 bits
Score difference with first non-orthologous sequence - P.jiroveci:47 S.tridecemlineatus:47

L0P8K9              	100.00%		I3NGT4              	100.00%
Bootstrap support for L0P8K9 as seed ortholog is 100%.
Bootstrap support for I3NGT4 as seed ortholog is 100%.

Group of orthologs #1411. Best score 46 bits
Score difference with first non-orthologous sequence - P.jiroveci:46 S.tridecemlineatus:46

L0P9H2              	100.00%		I3MGP0              	100.00%
                    	       		I3N7P9              	84.10%
Bootstrap support for L0P9H2 as seed ortholog is 100%.
Bootstrap support for I3MGP0 as seed ortholog is 100%.

Group of orthologs #1412. Best score 46 bits
Score difference with first non-orthologous sequence - P.jiroveci:46 S.tridecemlineatus:46

L0PE23              	100.00%		I3MST9              	100.00%
                    	       		I3MQ14              	5.78%
Bootstrap support for L0PE23 as seed ortholog is 100%.
Bootstrap support for I3MST9 as seed ortholog is 100%.

Group of orthologs #1413. Best score 46 bits
Score difference with first non-orthologous sequence - P.jiroveci:46 S.tridecemlineatus:46

L0PBR6              	100.00%		I3MCV6              	100.00%
Bootstrap support for L0PBR6 as seed ortholog is 100%.
Bootstrap support for I3MCV6 as seed ortholog is 100%.

Group of orthologs #1414. Best score 46 bits
Score difference with first non-orthologous sequence - P.jiroveci:46 S.tridecemlineatus:46

L0PC22              	100.00%		I3MXK9              	100.00%
Bootstrap support for L0PC22 as seed ortholog is 100%.
Bootstrap support for I3MXK9 as seed ortholog is 100%.

Group of orthologs #1415. Best score 45 bits
Score difference with first non-orthologous sequence - P.jiroveci:45 S.tridecemlineatus:45

L0PFI4              	100.00%		I3M799              	100.00%
                    	       		I3M0L8              	73.12%
Bootstrap support for L0PFI4 as seed ortholog is 100%.
Bootstrap support for I3M799 as seed ortholog is 100%.

Group of orthologs #1416. Best score 45 bits
Score difference with first non-orthologous sequence - P.jiroveci:45 S.tridecemlineatus:45

L0PB71              	100.00%		I3M4K8              	100.00%
Bootstrap support for L0PB71 as seed ortholog is 100%.
Bootstrap support for I3M4K8 as seed ortholog is 100%.

Group of orthologs #1417. Best score 45 bits
Score difference with first non-orthologous sequence - P.jiroveci:45 S.tridecemlineatus:45

L0PCV0              	100.00%		I3MKT4              	100.00%
Bootstrap support for L0PCV0 as seed ortholog is 100%.
Bootstrap support for I3MKT4 as seed ortholog is 100%.

Group of orthologs #1418. Best score 45 bits
Score difference with first non-orthologous sequence - P.jiroveci:45 S.tridecemlineatus:45

L0P875              	100.00%		I3MTJ9              	100.00%
Bootstrap support for L0P875 as seed ortholog is 100%.
Bootstrap support for I3MTJ9 as seed ortholog is 100%.

Group of orthologs #1419. Best score 44 bits
Score difference with first non-orthologous sequence - P.jiroveci:44 S.tridecemlineatus:44

L0PA08              	100.00%		I3LW85              	100.00%
Bootstrap support for L0PA08 as seed ortholog is 100%.
Bootstrap support for I3LW85 as seed ortholog is 100%.

Group of orthologs #1420. Best score 43 bits
Score difference with first non-orthologous sequence - P.jiroveci:43 S.tridecemlineatus:43

L0P8U4              	100.00%		I3N2R7              	100.00%
Bootstrap support for L0P8U4 as seed ortholog is 100%.
Bootstrap support for I3N2R7 as seed ortholog is 100%.

Group of orthologs #1421. Best score 43 bits
Score difference with first non-orthologous sequence - P.jiroveci:43 S.tridecemlineatus:43

L0PAV1              	100.00%		I3N9P1              	100.00%
Bootstrap support for L0PAV1 as seed ortholog is 100%.
Bootstrap support for I3N9P1 as seed ortholog is 100%.

Group of orthologs #1422. Best score 42 bits
Score difference with first non-orthologous sequence - P.jiroveci:42 S.tridecemlineatus:42

L0PBQ8              	100.00%		I3MAT1              	100.00%
Bootstrap support for L0PBQ8 as seed ortholog is 100%.
Bootstrap support for I3MAT1 as seed ortholog is 100%.

Group of orthologs #1423. Best score 41 bits
Score difference with first non-orthologous sequence - P.jiroveci:41 S.tridecemlineatus:41

L0PG70              	100.00%		I3LW26              	100.00%
Bootstrap support for L0PG70 as seed ortholog is 100%.
Bootstrap support for I3LW26 as seed ortholog is 100%.

Group of orthologs #1424. Best score 41 bits
Score difference with first non-orthologous sequence - P.jiroveci:41 S.tridecemlineatus:41

L0PFX7              	100.00%		I3NG21              	100.00%
Bootstrap support for L0PFX7 as seed ortholog is 100%.
Bootstrap support for I3NG21 as seed ortholog is 100%.