###################################
1383 groups of orthologs
1462 in-paralogs from P.jiroveci
2201 in-paralogs from S.scrofa
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3635 bits
Score difference with first non-orthologous sequence - P.jiroveci:3635 S.scrofa:3635

L0PCQ0              	100.00%		F1RHH8              	100.00%
Bootstrap support for L0PCQ0 as seed ortholog is 100%.
Bootstrap support for F1RHH8 as seed ortholog is 100%.

Group of orthologs #2. Best score 2190 bits
Score difference with first non-orthologous sequence - P.jiroveci:2190 S.scrofa:2190

L0PEQ1              	100.00%		F1RHR8              	100.00%
Bootstrap support for L0PEQ1 as seed ortholog is 100%.
Bootstrap support for F1RHR8 as seed ortholog is 100%.

Group of orthologs #3. Best score 1815 bits
Score difference with first non-orthologous sequence - P.jiroveci:1815 S.scrofa:1815

L0PGI2              	100.00%		F1RGB5              	100.00%
                    	       		F1S1B5              	42.19%
Bootstrap support for L0PGI2 as seed ortholog is 100%.
Bootstrap support for F1RGB5 as seed ortholog is 100%.

Group of orthologs #4. Best score 1397 bits
Score difference with first non-orthologous sequence - P.jiroveci:1397 S.scrofa:1397

L0PFL5              	100.00%		I3LTJ6              	100.00%
Bootstrap support for L0PFL5 as seed ortholog is 100%.
Bootstrap support for I3LTJ6 as seed ortholog is 100%.

Group of orthologs #5. Best score 1337 bits
Score difference with first non-orthologous sequence - P.jiroveci:1337 S.scrofa:1337

L0PB43              	100.00%		F1S2E6              	100.00%
Bootstrap support for L0PB43 as seed ortholog is 100%.
Bootstrap support for F1S2E6 as seed ortholog is 100%.

Group of orthologs #6. Best score 1336 bits
Score difference with first non-orthologous sequence - P.jiroveci:1336 S.scrofa:1336

L0PG53              	100.00%		F1SMZ9              	100.00%
Bootstrap support for L0PG53 as seed ortholog is 100%.
Bootstrap support for F1SMZ9 as seed ortholog is 100%.

Group of orthologs #7. Best score 1213 bits
Score difference with first non-orthologous sequence - P.jiroveci:1213 S.scrofa:1213

L0P818              	100.00%		O46374              	100.00%
                    	       		F1RS45              	47.62%
Bootstrap support for L0P818 as seed ortholog is 100%.
Bootstrap support for O46374 as seed ortholog is 100%.

Group of orthologs #8. Best score 1201 bits
Score difference with first non-orthologous sequence - P.jiroveci:1201 S.scrofa:1201

L0PGR1              	100.00%		F1RVR2              	100.00%
                    	       		F1RFM8              	12.65%
                    	       		I3LNF2              	9.33%
                    	       		F1SC07              	9.33%
Bootstrap support for L0PGR1 as seed ortholog is 100%.
Bootstrap support for F1RVR2 as seed ortholog is 100%.

Group of orthologs #9. Best score 1180 bits
Score difference with first non-orthologous sequence - P.jiroveci:1180 S.scrofa:140

L0P7C3              	100.00%		F1SSS0              	100.00%
Bootstrap support for L0P7C3 as seed ortholog is 100%.
Bootstrap support for F1SSS0 as seed ortholog is 96%.

Group of orthologs #10. Best score 1173 bits
Score difference with first non-orthologous sequence - P.jiroveci:1173 S.scrofa:599

L0PEW0              	100.00%		F1SLL6              	100.00%
Bootstrap support for L0PEW0 as seed ortholog is 100%.
Bootstrap support for F1SLL6 as seed ortholog is 100%.

Group of orthologs #11. Best score 1170 bits
Score difference with first non-orthologous sequence - P.jiroveci:1170 S.scrofa:1170

L0PCR2              	100.00%		F1RJX8              	100.00%
Bootstrap support for L0PCR2 as seed ortholog is 100%.
Bootstrap support for F1RJX8 as seed ortholog is 100%.

Group of orthologs #12. Best score 1161 bits
Score difference with first non-orthologous sequence - P.jiroveci:1161 S.scrofa:1161

L0PBE4              	100.00%		F1RQZ9              	100.00%
Bootstrap support for L0PBE4 as seed ortholog is 100%.
Bootstrap support for F1RQZ9 as seed ortholog is 100%.

Group of orthologs #13. Best score 1143 bits
Score difference with first non-orthologous sequence - P.jiroveci:1143 S.scrofa:1076

L0PFU4              	100.00%		I3LLS7              	100.00%
Bootstrap support for L0PFU4 as seed ortholog is 100%.
Bootstrap support for I3LLS7 as seed ortholog is 100%.

Group of orthologs #14. Best score 1139 bits
Score difference with first non-orthologous sequence - P.jiroveci:1139 S.scrofa:1139

L0PB90              	100.00%		I3LJR4              	100.00%
Bootstrap support for L0PB90 as seed ortholog is 100%.
Bootstrap support for I3LJR4 as seed ortholog is 100%.

Group of orthologs #15. Best score 1104 bits
Score difference with first non-orthologous sequence - P.jiroveci:1104 S.scrofa:820

L0PDK3              	100.00%		F1RH32              	100.00%
Bootstrap support for L0PDK3 as seed ortholog is 100%.
Bootstrap support for F1RH32 as seed ortholog is 100%.

Group of orthologs #16. Best score 1074 bits
Score difference with first non-orthologous sequence - P.jiroveci:1074 S.scrofa:361

L0PCK0              	100.00%		F1RWX8              	100.00%
L0P7U1              	99.05%		
Bootstrap support for L0PCK0 as seed ortholog is 100%.
Bootstrap support for F1RWX8 as seed ortholog is 100%.

Group of orthologs #17. Best score 1063 bits
Score difference with first non-orthologous sequence - P.jiroveci:1063 S.scrofa:649

L0PG21              	100.00%		F1RRG9              	100.00%
                    	       		F1RTI9              	62.85%
Bootstrap support for L0PG21 as seed ortholog is 100%.
Bootstrap support for F1RRG9 as seed ortholog is 100%.

Group of orthologs #18. Best score 1059 bits
Score difference with first non-orthologous sequence - P.jiroveci:1059 S.scrofa:327

L0PG77              	100.00%		F1SPQ0              	100.00%
Bootstrap support for L0PG77 as seed ortholog is 100%.
Bootstrap support for F1SPQ0 as seed ortholog is 100%.

Group of orthologs #19. Best score 1032 bits
Score difference with first non-orthologous sequence - P.jiroveci:515 S.scrofa:581

L0PAJ7              	100.00%		Q767K6              	100.00%
Bootstrap support for L0PAJ7 as seed ortholog is 100%.
Bootstrap support for Q767K6 as seed ortholog is 100%.

Group of orthologs #20. Best score 988 bits
Score difference with first non-orthologous sequence - P.jiroveci:988 S.scrofa:604

L0P9P7              	100.00%		F1SUA2              	100.00%
Bootstrap support for L0P9P7 as seed ortholog is 100%.
Bootstrap support for F1SUA2 as seed ortholog is 100%.

Group of orthologs #21. Best score 977 bits
Score difference with first non-orthologous sequence - P.jiroveci:977 S.scrofa:977

L0P9F0              	100.00%		F1SCA0              	100.00%
                    	       		I3LTQ1              	85.66%
Bootstrap support for L0P9F0 as seed ortholog is 100%.
Bootstrap support for F1SCA0 as seed ortholog is 100%.

Group of orthologs #22. Best score 976 bits
Score difference with first non-orthologous sequence - P.jiroveci:429 S.scrofa:976

L0P8X7              	100.00%		F1S1H3              	100.00%
Bootstrap support for L0P8X7 as seed ortholog is 100%.
Bootstrap support for F1S1H3 as seed ortholog is 100%.

Group of orthologs #23. Best score 966 bits
Score difference with first non-orthologous sequence - P.jiroveci:966 S.scrofa:791

L0PFN4              	100.00%		P16276              	100.00%
Bootstrap support for L0PFN4 as seed ortholog is 100%.
Bootstrap support for P16276 as seed ortholog is 100%.

Group of orthologs #24. Best score 950 bits
Score difference with first non-orthologous sequence - P.jiroveci:183 S.scrofa:168

L0PEK6              	100.00%		Q6S4N2              	100.00%
                    	       		P34930              	92.26%
                    	       		I3L7U0              	72.26%
                    	       		A5A8V7              	57.74%
                    	       		Q04967              	43.55%
                    	       		F1SA70              	36.45%
                    	       		F1S9Q3              	18.06%
Bootstrap support for L0PEK6 as seed ortholog is 99%.
Bootstrap support for Q6S4N2 as seed ortholog is 100%.

Group of orthologs #25. Best score 950 bits
Score difference with first non-orthologous sequence - P.jiroveci:950 S.scrofa:950

L0PBF5              	100.00%		F6PV15              	100.00%
Bootstrap support for L0PBF5 as seed ortholog is 100%.
Bootstrap support for F6PV15 as seed ortholog is 100%.

Group of orthologs #26. Best score 948 bits
Score difference with first non-orthologous sequence - P.jiroveci:860 S.scrofa:542

L0PAG9              	100.00%		A5GFS1              	100.00%
Bootstrap support for L0PAG9 as seed ortholog is 100%.
Bootstrap support for A5GFS1 as seed ortholog is 100%.

Group of orthologs #27. Best score 928 bits
Score difference with first non-orthologous sequence - P.jiroveci:928 S.scrofa:928

L0PAK7              	100.00%		I3L770              	100.00%
L0P8F2              	66.61%		
Bootstrap support for L0PAK7 as seed ortholog is 100%.
Bootstrap support for I3L770 as seed ortholog is 100%.

Group of orthologs #28. Best score 928 bits
Score difference with first non-orthologous sequence - P.jiroveci:928 S.scrofa:928

L0P7V0              	100.00%		F1SL54              	100.00%
Bootstrap support for L0P7V0 as seed ortholog is 100%.
Bootstrap support for F1SL54 as seed ortholog is 100%.

Group of orthologs #29. Best score 923 bits
Score difference with first non-orthologous sequence - P.jiroveci:923 S.scrofa:923

L0P915              	100.00%		F1RM15              	100.00%
Bootstrap support for L0P915 as seed ortholog is 100%.
Bootstrap support for F1RM15 as seed ortholog is 100%.

Group of orthologs #30. Best score 916 bits
Score difference with first non-orthologous sequence - P.jiroveci:916 S.scrofa:283

L0PAW9              	100.00%		O02705              	100.00%
L0PBZ0              	69.26%		F1RQU2              	65.18%
Bootstrap support for L0PAW9 as seed ortholog is 100%.
Bootstrap support for O02705 as seed ortholog is 100%.

Group of orthologs #31. Best score 913 bits
Score difference with first non-orthologous sequence - P.jiroveci:839 S.scrofa:194

L0PG61              	100.00%		I3LGF0              	100.00%
Bootstrap support for L0PG61 as seed ortholog is 100%.
Bootstrap support for I3LGF0 as seed ortholog is 99%.

Group of orthologs #32. Best score 911 bits
Score difference with first non-orthologous sequence - P.jiroveci:380 S.scrofa:448

L0PFC8              	100.00%		F1S5A8              	100.00%
Bootstrap support for L0PFC8 as seed ortholog is 100%.
Bootstrap support for F1S5A8 as seed ortholog is 100%.

Group of orthologs #33. Best score 902 bits
Score difference with first non-orthologous sequence - P.jiroveci:390 S.scrofa:600

L0PB13              	100.00%		F1S3A8              	100.00%
Bootstrap support for L0PB13 as seed ortholog is 100%.
Bootstrap support for F1S3A8 as seed ortholog is 100%.

Group of orthologs #34. Best score 901 bits
Score difference with first non-orthologous sequence - P.jiroveci:901 S.scrofa:565

L0PDI4              	100.00%		F1SKJ1              	100.00%
                    	       		F1SSA6              	60.14%
                    	       		I3L5B3              	29.11%
                    	       		Q9TV62              	15.35%
                    	       		Q9TV61              	15.21%
                    	       		Q9TV63              	15.07%
                    	       		F1SS64              	15.04%
                    	       		F1SS61              	14.18%
                    	       		F1SS66              	13.39%
                    	       		P79293              	13.22%
                    	       		F1S4X7              	11.53%
                    	       		I3LIE3              	9.68%
Bootstrap support for L0PDI4 as seed ortholog is 100%.
Bootstrap support for F1SKJ1 as seed ortholog is 100%.

Group of orthologs #35. Best score 884 bits
Score difference with first non-orthologous sequence - P.jiroveci:884 S.scrofa:884

L0PBY6              	100.00%		F1SUZ5              	100.00%
Bootstrap support for L0PBY6 as seed ortholog is 100%.
Bootstrap support for F1SUZ5 as seed ortholog is 100%.

Group of orthologs #36. Best score 861 bits
Score difference with first non-orthologous sequence - P.jiroveci:562 S.scrofa:514

L0PCW9              	100.00%		P11607              	100.00%
                    	       		F1RFH9              	67.90%
Bootstrap support for L0PCW9 as seed ortholog is 100%.
Bootstrap support for P11607 as seed ortholog is 100%.

Group of orthologs #37. Best score 855 bits
Score difference with first non-orthologous sequence - P.jiroveci:855 S.scrofa:855

L0P9H4              	100.00%		Q0QF01              	100.00%
                    	       		I3LS54              	54.82%
Bootstrap support for L0P9H4 as seed ortholog is 100%.
Bootstrap support for Q0QF01 as seed ortholog is 100%.

Group of orthologs #38. Best score 852 bits
Score difference with first non-orthologous sequence - P.jiroveci:852 S.scrofa:852

L0PEU6              	100.00%		K7GSM4              	100.00%
                    	       		F1SBE8              	64.13%
Bootstrap support for L0PEU6 as seed ortholog is 100%.
Bootstrap support for K7GSM4 as seed ortholog is 100%.

Group of orthologs #39. Best score 846 bits
Score difference with first non-orthologous sequence - P.jiroveci:280 S.scrofa:426

L0PFS2              	100.00%		F1RGJ3              	100.00%
Bootstrap support for L0PFS2 as seed ortholog is 100%.
Bootstrap support for F1RGJ3 as seed ortholog is 100%.

Group of orthologs #40. Best score 844 bits
Score difference with first non-orthologous sequence - P.jiroveci:844 S.scrofa:478

L0PGL4              	100.00%		F1SSV0              	100.00%
L0P7Q7              	24.03%		
Bootstrap support for L0PGL4 as seed ortholog is 100%.
Bootstrap support for F1SSV0 as seed ortholog is 100%.

Group of orthologs #41. Best score 841 bits
Score difference with first non-orthologous sequence - P.jiroveci:841 S.scrofa:841

L0PGR4              	100.00%		F1SSH8              	100.00%
L0PFQ2              	92.12%		F1SDW6              	60.03%
Bootstrap support for L0PGR4 as seed ortholog is 100%.
Bootstrap support for F1SSH8 as seed ortholog is 100%.

Group of orthologs #42. Best score 838 bits
Score difference with first non-orthologous sequence - P.jiroveci:838 S.scrofa:838

L0PDF1              	100.00%		F1RS49              	100.00%
Bootstrap support for L0PDF1 as seed ortholog is 100%.
Bootstrap support for F1RS49 as seed ortholog is 100%.

Group of orthologs #43. Best score 834 bits
Score difference with first non-orthologous sequence - P.jiroveci:834 S.scrofa:834

L0PBD7              	100.00%		I3LM93              	100.00%
                    	       		F1SEX5              	75.10%
Bootstrap support for L0PBD7 as seed ortholog is 100%.
Bootstrap support for I3LM93 as seed ortholog is 100%.

Group of orthologs #44. Best score 819 bits
Score difference with first non-orthologous sequence - P.jiroveci:757 S.scrofa:819

L0PBL6              	100.00%		F1SH51              	100.00%
Bootstrap support for L0PBL6 as seed ortholog is 100%.
Bootstrap support for F1SH51 as seed ortholog is 100%.

Group of orthologs #45. Best score 812 bits
Score difference with first non-orthologous sequence - P.jiroveci:812 S.scrofa:812

L0PGL8              	100.00%		F1SRP0              	100.00%
                    	       		F1SP73              	88.57%
Bootstrap support for L0PGL8 as seed ortholog is 100%.
Bootstrap support for F1SRP0 as seed ortholog is 100%.

Group of orthologs #46. Best score 800 bits
Score difference with first non-orthologous sequence - P.jiroveci:800 S.scrofa:800

L0PC54              	100.00%		F1SGS7              	100.00%
Bootstrap support for L0PC54 as seed ortholog is 100%.
Bootstrap support for F1SGS7 as seed ortholog is 100%.

Group of orthologs #47. Best score 794 bits
Score difference with first non-orthologous sequence - P.jiroveci:794 S.scrofa:794

L0P7X5              	100.00%		F1RXZ5              	100.00%
Bootstrap support for L0P7X5 as seed ortholog is 100%.
Bootstrap support for F1RXZ5 as seed ortholog is 100%.

Group of orthologs #48. Best score 792 bits
Score difference with first non-orthologous sequence - P.jiroveci:690 S.scrofa:792

L0PH89              	100.00%		Q29048              	100.00%
Bootstrap support for L0PH89 as seed ortholog is 100%.
Bootstrap support for Q29048 as seed ortholog is 100%.

Group of orthologs #49. Best score 788 bits
Score difference with first non-orthologous sequence - P.jiroveci:788 S.scrofa:788

L0P9W2              	100.00%		F1RFU3              	100.00%
Bootstrap support for L0P9W2 as seed ortholog is 100%.
Bootstrap support for F1RFU3 as seed ortholog is 100%.

Group of orthologs #50. Best score 781 bits
Score difference with first non-orthologous sequence - P.jiroveci:781 S.scrofa:395

L0PBA5              	100.00%		Q0PY11              	100.00%
                    	       		F1STM4              	33.33%
                    	       		F1STN7              	32.67%
Bootstrap support for L0PBA5 as seed ortholog is 100%.
Bootstrap support for Q0PY11 as seed ortholog is 100%.

Group of orthologs #51. Best score 780 bits
Score difference with first non-orthologous sequence - P.jiroveci:192 S.scrofa:780

L0PDB3              	100.00%		F1RU69              	100.00%
                    	       		Q767M3              	100.00%
Bootstrap support for L0PDB3 as seed ortholog is 99%.
Bootstrap support for F1RU69 as seed ortholog is 100%.
Bootstrap support for Q767M3 as seed ortholog is 100%.

Group of orthologs #52. Best score 780 bits
Score difference with first non-orthologous sequence - P.jiroveci:780 S.scrofa:780

L0PAP2              	100.00%		F1SVC3              	100.00%
Bootstrap support for L0PAP2 as seed ortholog is 100%.
Bootstrap support for F1SVC3 as seed ortholog is 100%.

Group of orthologs #53. Best score 779 bits
Score difference with first non-orthologous sequence - P.jiroveci:779 S.scrofa:779

L0PEL5              	100.00%		F1SJG5              	100.00%
L0PGC2              	49.61%		K7GT64              	32.60%
Bootstrap support for L0PEL5 as seed ortholog is 100%.
Bootstrap support for F1SJG5 as seed ortholog is 100%.

Group of orthologs #54. Best score 776 bits
Score difference with first non-orthologous sequence - P.jiroveci:776 S.scrofa:167

L0PDQ4              	100.00%		F1S431              	100.00%
Bootstrap support for L0PDQ4 as seed ortholog is 100%.
Bootstrap support for F1S431 as seed ortholog is 99%.

Group of orthologs #55. Best score 765 bits
Score difference with first non-orthologous sequence - P.jiroveci:765 S.scrofa:765

L0P710              	100.00%		F1SKG4              	100.00%
Bootstrap support for L0P710 as seed ortholog is 100%.
Bootstrap support for F1SKG4 as seed ortholog is 100%.

Group of orthologs #56. Best score 764 bits
Score difference with first non-orthologous sequence - P.jiroveci:764 S.scrofa:298

L0PGU1              	100.00%		F1RZD2              	100.00%
                    	       		F1RPQ8              	38.63%
                    	       		F1RZC1              	33.27%
Bootstrap support for L0PGU1 as seed ortholog is 100%.
Bootstrap support for F1RZD2 as seed ortholog is 100%.

Group of orthologs #57. Best score 764 bits
Score difference with first non-orthologous sequence - P.jiroveci:764 S.scrofa:691

L0P9R9              	100.00%		D2SW95              	100.00%
Bootstrap support for L0P9R9 as seed ortholog is 100%.
Bootstrap support for D2SW95 as seed ortholog is 100%.

Group of orthologs #58. Best score 753 bits
Score difference with first non-orthologous sequence - P.jiroveci:636 S.scrofa:3

L0PAC9              	100.00%		F1S3S6              	100.00%
                    	       		F1SNS2              	17.75%
                    	       		I3LRE2              	10.36%
Bootstrap support for L0PAC9 as seed ortholog is 100%.
Bootstrap support for F1S3S6 as seed ortholog is 85%.

Group of orthologs #59. Best score 750 bits
Score difference with first non-orthologous sequence - P.jiroveci:424 S.scrofa:750

L0PA62              	100.00%		F1SPF3              	100.00%
Bootstrap support for L0PA62 as seed ortholog is 100%.
Bootstrap support for F1SPF3 as seed ortholog is 100%.

Group of orthologs #60. Best score 748 bits
Score difference with first non-orthologous sequence - P.jiroveci:748 S.scrofa:120

L0PBR4              	100.00%		F2Z571              	100.00%
                    	       		F2Z5K5              	90.06%
                    	       		Q767L7              	88.82%
                    	       		F2Z5B2              	88.20%
                    	       		F1S6M7              	64.60%
                    	       		I3LBV1              	32.30%
Bootstrap support for L0PBR4 as seed ortholog is 100%.
Bootstrap support for F2Z571 as seed ortholog is 99%.

Group of orthologs #61. Best score 748 bits
Score difference with first non-orthologous sequence - P.jiroveci:748 S.scrofa:414

L0PB83              	100.00%		F1RG74              	100.00%
Bootstrap support for L0PB83 as seed ortholog is 100%.
Bootstrap support for F1RG74 as seed ortholog is 100%.

Group of orthologs #62. Best score 748 bits
Score difference with first non-orthologous sequence - P.jiroveci:748 S.scrofa:748

L0P7K0              	100.00%		F1SHD7              	100.00%
Bootstrap support for L0P7K0 as seed ortholog is 100%.
Bootstrap support for F1SHD7 as seed ortholog is 100%.

Group of orthologs #63. Best score 745 bits
Score difference with first non-orthologous sequence - P.jiroveci:745 S.scrofa:745

L0PFJ0              	100.00%		F1RRF2              	100.00%
                    	       		F1S775              	12.29%
Bootstrap support for L0PFJ0 as seed ortholog is 100%.
Bootstrap support for F1RRF2 as seed ortholog is 100%.

Group of orthologs #64. Best score 738 bits
Score difference with first non-orthologous sequence - P.jiroveci:738 S.scrofa:738

L0PG12              	100.00%		F1S557              	100.00%
Bootstrap support for L0PG12 as seed ortholog is 100%.
Bootstrap support for F1S557 as seed ortholog is 100%.

Group of orthologs #65. Best score 732 bits
Score difference with first non-orthologous sequence - P.jiroveci:732 S.scrofa:234

L0PB85              	100.00%		F1SA77              	100.00%
                    	       		I3LIS2              	41.52%
Bootstrap support for L0PB85 as seed ortholog is 100%.
Bootstrap support for F1SA77 as seed ortholog is 99%.

Group of orthologs #66. Best score 730 bits
Score difference with first non-orthologous sequence - P.jiroveci:730 S.scrofa:730

L0PBP8              	100.00%		I3LKJ6              	100.00%
Bootstrap support for L0PBP8 as seed ortholog is 100%.
Bootstrap support for I3LKJ6 as seed ortholog is 100%.

Group of orthologs #67. Best score 727 bits
Score difference with first non-orthologous sequence - P.jiroveci:727 S.scrofa:727

L0PAS8              	100.00%		F1SPM6              	100.00%
                    	       		F1S5Q1              	34.58%
Bootstrap support for L0PAS8 as seed ortholog is 100%.
Bootstrap support for F1SPM6 as seed ortholog is 100%.

Group of orthologs #68. Best score 724 bits
Score difference with first non-orthologous sequence - P.jiroveci:403 S.scrofa:494

L0PBV5              	100.00%		I3L7E5              	100.00%
Bootstrap support for L0PBV5 as seed ortholog is 100%.
Bootstrap support for I3L7E5 as seed ortholog is 100%.

Group of orthologs #69. Best score 724 bits
Score difference with first non-orthologous sequence - P.jiroveci:724 S.scrofa:724

L0P773              	100.00%		I3LEW5              	100.00%
Bootstrap support for L0P773 as seed ortholog is 100%.
Bootstrap support for I3LEW5 as seed ortholog is 100%.

Group of orthologs #70. Best score 720 bits
Score difference with first non-orthologous sequence - P.jiroveci:720 S.scrofa:720

L0PAQ3              	100.00%		F1SFF8              	100.00%
                    	       		F1RQQ8              	69.02%
                    	       		F1RQQ7              	44.92%
Bootstrap support for L0PAQ3 as seed ortholog is 100%.
Bootstrap support for F1SFF8 as seed ortholog is 100%.

Group of orthologs #71. Best score 720 bits
Score difference with first non-orthologous sequence - P.jiroveci:720 S.scrofa:720

L0PDF3              	100.00%		F1RIP1              	100.00%
                    	       		F1SR04              	44.19%
Bootstrap support for L0PDF3 as seed ortholog is 100%.
Bootstrap support for F1RIP1 as seed ortholog is 100%.

Group of orthologs #72. Best score 717 bits
Score difference with first non-orthologous sequence - P.jiroveci:717 S.scrofa:717

L0PC43              	100.00%		F1RJK5              	100.00%
L0PCW3              	47.59%		
Bootstrap support for L0PC43 as seed ortholog is 100%.
Bootstrap support for F1RJK5 as seed ortholog is 100%.

Group of orthologs #73. Best score 714 bits
Score difference with first non-orthologous sequence - P.jiroveci:714 S.scrofa:714

L0PDK6              	100.00%		F1S8K5              	100.00%
Bootstrap support for L0PDK6 as seed ortholog is 100%.
Bootstrap support for F1S8K5 as seed ortholog is 100%.

Group of orthologs #74. Best score 707 bits
Score difference with first non-orthologous sequence - P.jiroveci:707 S.scrofa:707

L0PE57              	100.00%		I3LP37              	100.00%
Bootstrap support for L0PE57 as seed ortholog is 100%.
Bootstrap support for I3LP37 as seed ortholog is 100%.

Group of orthologs #75. Best score 704 bits
Score difference with first non-orthologous sequence - P.jiroveci:550 S.scrofa:704

L0PBQ6              	100.00%		F1SUF6              	100.00%
Bootstrap support for L0PBQ6 as seed ortholog is 100%.
Bootstrap support for F1SUF6 as seed ortholog is 100%.

Group of orthologs #76. Best score 700 bits
Score difference with first non-orthologous sequence - P.jiroveci:700 S.scrofa:700

L0P9U5              	100.00%		F1RZ96              	100.00%
                    	       		F1SP18              	27.38%
                    	       		I3LDF6              	5.67%
Bootstrap support for L0P9U5 as seed ortholog is 100%.
Bootstrap support for F1RZ96 as seed ortholog is 100%.

Group of orthologs #77. Best score 697 bits
Score difference with first non-orthologous sequence - P.jiroveci:430 S.scrofa:472

L0P945              	100.00%		F1SB63              	100.00%
Bootstrap support for L0P945 as seed ortholog is 100%.
Bootstrap support for F1SB63 as seed ortholog is 100%.

Group of orthologs #78. Best score 694 bits
Score difference with first non-orthologous sequence - P.jiroveci:694 S.scrofa:336

L0P7L0              	100.00%		I3LR20              	100.00%
L0PCI7              	40.12%		
Bootstrap support for L0P7L0 as seed ortholog is 100%.
Bootstrap support for I3LR20 as seed ortholog is 100%.

Group of orthologs #79. Best score 691 bits
Score difference with first non-orthologous sequence - P.jiroveci:691 S.scrofa:691

L0P8L6              	100.00%		F1SK24              	100.00%
Bootstrap support for L0P8L6 as seed ortholog is 100%.
Bootstrap support for F1SK24 as seed ortholog is 100%.

Group of orthologs #80. Best score 691 bits
Score difference with first non-orthologous sequence - P.jiroveci:691 S.scrofa:412

L0PBW7              	100.00%		Q5D891              	100.00%
Bootstrap support for L0PBW7 as seed ortholog is 100%.
Bootstrap support for Q5D891 as seed ortholog is 100%.

Group of orthologs #81. Best score 687 bits
Score difference with first non-orthologous sequence - P.jiroveci:600 S.scrofa:157

L0PA91              	100.00%		Q6QAQ1              	100.00%
                    	       		C7AI81              	50.68%
                    	       		B6VNT8              	47.95%
                    	       		P68137              	45.21%
Bootstrap support for L0PA91 as seed ortholog is 100%.
Bootstrap support for Q6QAQ1 as seed ortholog is 100%.

Group of orthologs #82. Best score 686 bits
Score difference with first non-orthologous sequence - P.jiroveci:686 S.scrofa:417

L0PG19              	100.00%		P79403              	100.00%
                    	       		F1SI19              	22.56%
Bootstrap support for L0PG19 as seed ortholog is 100%.
Bootstrap support for P79403 as seed ortholog is 100%.

Group of orthologs #83. Best score 685 bits
Score difference with first non-orthologous sequence - P.jiroveci:565 S.scrofa:580

L0PIF0              	100.00%		F1SFG4              	100.00%
                    	       		F1SFG8              	14.18%
                    	       		I3LUR3              	12.77%
                    	       		F1SUR9              	8.59%
                    	       		I3L7P8              	8.59%
Bootstrap support for L0PIF0 as seed ortholog is 100%.
Bootstrap support for F1SFG4 as seed ortholog is 100%.

Group of orthologs #84. Best score 681 bits
Score difference with first non-orthologous sequence - P.jiroveci:391 S.scrofa:473

L0PG45              	100.00%		F1SLF6              	100.00%
Bootstrap support for L0PG45 as seed ortholog is 100%.
Bootstrap support for F1SLF6 as seed ortholog is 100%.

Group of orthologs #85. Best score 679 bits
Score difference with first non-orthologous sequence - P.jiroveci:177 S.scrofa:261

L0P9U6              	100.00%		F1SDW0              	100.00%
Bootstrap support for L0P9U6 as seed ortholog is 99%.
Bootstrap support for F1SDW0 as seed ortholog is 100%.

Group of orthologs #86. Best score 676 bits
Score difference with first non-orthologous sequence - P.jiroveci:676 S.scrofa:228

L0PC65              	100.00%		F1SF78              	100.00%
Bootstrap support for L0PC65 as seed ortholog is 100%.
Bootstrap support for F1SF78 as seed ortholog is 100%.

Group of orthologs #87. Best score 676 bits
Score difference with first non-orthologous sequence - P.jiroveci:676 S.scrofa:676

L0PEK9              	100.00%		F1SBU7              	100.00%
Bootstrap support for L0PEK9 as seed ortholog is 100%.
Bootstrap support for F1SBU7 as seed ortholog is 100%.

Group of orthologs #88. Best score 675 bits
Score difference with first non-orthologous sequence - P.jiroveci:564 S.scrofa:675

L0PA41              	100.00%		F1SAY9              	100.00%
Bootstrap support for L0PA41 as seed ortholog is 100%.
Bootstrap support for F1SAY9 as seed ortholog is 100%.

Group of orthologs #89. Best score 674 bits
Score difference with first non-orthologous sequence - P.jiroveci:674 S.scrofa:674

L0P971              	100.00%		F1RVN1              	100.00%
Bootstrap support for L0P971 as seed ortholog is 100%.
Bootstrap support for F1RVN1 as seed ortholog is 100%.

Group of orthologs #90. Best score 672 bits
Score difference with first non-orthologous sequence - P.jiroveci:591 S.scrofa:672

L0P8G2              	100.00%		F1RH60              	100.00%
                    	       		F1RZ02              	51.31%
Bootstrap support for L0P8G2 as seed ortholog is 100%.
Bootstrap support for F1RH60 as seed ortholog is 100%.

Group of orthologs #91. Best score 671 bits
Score difference with first non-orthologous sequence - P.jiroveci:671 S.scrofa:671

L0PBY5              	100.00%		F1RQJ4              	100.00%
                    	       		F1RP50              	16.74%
Bootstrap support for L0PBY5 as seed ortholog is 100%.
Bootstrap support for F1RQJ4 as seed ortholog is 100%.

Group of orthologs #92. Best score 666 bits
Score difference with first non-orthologous sequence - P.jiroveci:542 S.scrofa:404

L0PE26              	100.00%		F1S3V8              	100.00%
Bootstrap support for L0PE26 as seed ortholog is 100%.
Bootstrap support for F1S3V8 as seed ortholog is 100%.

Group of orthologs #93. Best score 665 bits
Score difference with first non-orthologous sequence - P.jiroveci:665 S.scrofa:665

L0PE96              	100.00%		F1SRZ7              	100.00%
Bootstrap support for L0PE96 as seed ortholog is 100%.
Bootstrap support for F1SRZ7 as seed ortholog is 100%.

Group of orthologs #94. Best score 665 bits
Score difference with first non-orthologous sequence - P.jiroveci:415 S.scrofa:456

L0PGA5              	100.00%		I3LR32              	100.00%
Bootstrap support for L0PGA5 as seed ortholog is 100%.
Bootstrap support for I3LR32 as seed ortholog is 100%.

Group of orthologs #95. Best score 664 bits
Score difference with first non-orthologous sequence - P.jiroveci:664 S.scrofa:664

L0P7R6              	100.00%		F1RZY7              	100.00%
L0PHF8              	83.60%		
Bootstrap support for L0P7R6 as seed ortholog is 100%.
Bootstrap support for F1RZY7 as seed ortholog is 100%.

Group of orthologs #96. Best score 664 bits
Score difference with first non-orthologous sequence - P.jiroveci:455 S.scrofa:481

L0PER6              	100.00%		D0G0C8              	100.00%
Bootstrap support for L0PER6 as seed ortholog is 100%.
Bootstrap support for D0G0C8 as seed ortholog is 100%.

Group of orthologs #97. Best score 663 bits
Score difference with first non-orthologous sequence - P.jiroveci:366 S.scrofa:663

L0PFG7              	100.00%		F1S458              	100.00%
Bootstrap support for L0PFG7 as seed ortholog is 100%.
Bootstrap support for F1S458 as seed ortholog is 100%.

Group of orthologs #98. Best score 661 bits
Score difference with first non-orthologous sequence - P.jiroveci:661 S.scrofa:661

L0PDI6              	100.00%		F1RWJ5              	100.00%
Bootstrap support for L0PDI6 as seed ortholog is 100%.
Bootstrap support for F1RWJ5 as seed ortholog is 100%.

Group of orthologs #99. Best score 657 bits
Score difference with first non-orthologous sequence - P.jiroveci:657 S.scrofa:397

L0P8Y6              	100.00%		F1SDX0              	100.00%
Bootstrap support for L0P8Y6 as seed ortholog is 100%.
Bootstrap support for F1SDX0 as seed ortholog is 100%.

Group of orthologs #100. Best score 653 bits
Score difference with first non-orthologous sequence - P.jiroveci:653 S.scrofa:601

L0P8M6              	100.00%		F1SNE9              	100.00%
                    	       		F1SPF9              	5.83%
Bootstrap support for L0P8M6 as seed ortholog is 100%.
Bootstrap support for F1SNE9 as seed ortholog is 100%.

Group of orthologs #101. Best score 652 bits
Score difference with first non-orthologous sequence - P.jiroveci:652 S.scrofa:652

L0PDG3              	100.00%		F1RP44              	100.00%
                    	       		F1SMM3              	73.17%
Bootstrap support for L0PDG3 as seed ortholog is 100%.
Bootstrap support for F1RP44 as seed ortholog is 100%.

Group of orthologs #102. Best score 648 bits
Score difference with first non-orthologous sequence - P.jiroveci:366 S.scrofa:269

L0PBN5              	100.00%		F1SAD7              	100.00%
Bootstrap support for L0PBN5 as seed ortholog is 100%.
Bootstrap support for F1SAD7 as seed ortholog is 99%.

Group of orthologs #103. Best score 647 bits
Score difference with first non-orthologous sequence - P.jiroveci:409 S.scrofa:516

L0PGS4              	100.00%		F1RIU3              	100.00%
                    	       		I3L9J4              	17.37%
                    	       		F1S0E9              	15.26%
Bootstrap support for L0PGS4 as seed ortholog is 100%.
Bootstrap support for F1RIU3 as seed ortholog is 100%.

Group of orthologs #104. Best score 639 bits
Score difference with first non-orthologous sequence - P.jiroveci:639 S.scrofa:639

L0PC79              	100.00%		F1S0R1              	100.00%
                    	       		F1SNJ8              	35.11%
                    	       		F1RFL9              	19.29%
                    	       		F1RVP8              	7.21%
Bootstrap support for L0PC79 as seed ortholog is 100%.
Bootstrap support for F1S0R1 as seed ortholog is 100%.

Group of orthologs #105. Best score 631 bits
Score difference with first non-orthologous sequence - P.jiroveci:631 S.scrofa:213

L0PEQ8              	100.00%		Q2HYU2              	100.00%
                    	       		I3LFQ5              	43.15%
Bootstrap support for L0PEQ8 as seed ortholog is 100%.
Bootstrap support for Q2HYU2 as seed ortholog is 100%.

Group of orthologs #106. Best score 631 bits
Score difference with first non-orthologous sequence - P.jiroveci:631 S.scrofa:383

L0P8C8              	100.00%		I3LII3              	100.00%
Bootstrap support for L0P8C8 as seed ortholog is 100%.
Bootstrap support for I3LII3 as seed ortholog is 100%.

Group of orthologs #107. Best score 629 bits
Score difference with first non-orthologous sequence - P.jiroveci:629 S.scrofa:188

L0PDJ1              	100.00%		Q710C4              	100.00%
Bootstrap support for L0PDJ1 as seed ortholog is 100%.
Bootstrap support for Q710C4 as seed ortholog is 100%.

Group of orthologs #108. Best score 625 bits
Score difference with first non-orthologous sequence - P.jiroveci:625 S.scrofa:481

L0PEP7              	100.00%		F1STE8              	100.00%
Bootstrap support for L0PEP7 as seed ortholog is 100%.
Bootstrap support for F1STE8 as seed ortholog is 100%.

Group of orthologs #109. Best score 624 bits
Score difference with first non-orthologous sequence - P.jiroveci:309 S.scrofa:315

L0P8L4              	100.00%		F1RSA2              	100.00%
                    	       		F1S5U9              	48.16%
Bootstrap support for L0P8L4 as seed ortholog is 99%.
Bootstrap support for F1RSA2 as seed ortholog is 100%.

Group of orthologs #110. Best score 622 bits
Score difference with first non-orthologous sequence - P.jiroveci:527 S.scrofa:622

L0PBJ1              	100.00%		F1RYP5              	100.00%
Bootstrap support for L0PBJ1 as seed ortholog is 100%.
Bootstrap support for F1RYP5 as seed ortholog is 100%.

Group of orthologs #111. Best score 619 bits
Score difference with first non-orthologous sequence - P.jiroveci:424 S.scrofa:355

L0P8E7              	100.00%		I3L7B7              	100.00%
Bootstrap support for L0P8E7 as seed ortholog is 100%.
Bootstrap support for I3L7B7 as seed ortholog is 100%.

Group of orthologs #112. Best score 615 bits
Score difference with first non-orthologous sequence - P.jiroveci:615 S.scrofa:615

L0P9S1              	100.00%		F1RPU0              	100.00%
Bootstrap support for L0P9S1 as seed ortholog is 100%.
Bootstrap support for F1RPU0 as seed ortholog is 100%.

Group of orthologs #113. Best score 614 bits
Score difference with first non-orthologous sequence - P.jiroveci:614 S.scrofa:614

L0PAX4              	100.00%		F1RKZ6              	100.00%
Bootstrap support for L0PAX4 as seed ortholog is 100%.
Bootstrap support for F1RKZ6 as seed ortholog is 100%.

Group of orthologs #114. Best score 614 bits
Score difference with first non-orthologous sequence - P.jiroveci:552 S.scrofa:614

L0PDM6              	100.00%		F1SMZ7              	100.00%
Bootstrap support for L0PDM6 as seed ortholog is 100%.
Bootstrap support for F1SMZ7 as seed ortholog is 100%.

Group of orthologs #115. Best score 612 bits
Score difference with first non-orthologous sequence - P.jiroveci:286 S.scrofa:372

L0PD31              	100.00%		F1RSE7              	100.00%
Bootstrap support for L0PD31 as seed ortholog is 100%.
Bootstrap support for F1RSE7 as seed ortholog is 100%.

Group of orthologs #116. Best score 610 bits
Score difference with first non-orthologous sequence - P.jiroveci:610 S.scrofa:610

L0PBW3              	100.00%		F1RLQ9              	100.00%
                    	       		I3LEY6              	16.68%
Bootstrap support for L0PBW3 as seed ortholog is 100%.
Bootstrap support for F1RLQ9 as seed ortholog is 100%.

Group of orthologs #117. Best score 609 bits
Score difference with first non-orthologous sequence - P.jiroveci:609 S.scrofa:609

L0PB96              	100.00%		F1S1A8              	100.00%
Bootstrap support for L0PB96 as seed ortholog is 100%.
Bootstrap support for F1S1A8 as seed ortholog is 100%.

Group of orthologs #118. Best score 607 bits
Score difference with first non-orthologous sequence - P.jiroveci:363 S.scrofa:324

L0PFW1              	100.00%		P23220              	100.00%
                    	       		F1S2B3              	74.26%
                    	       		F1S2B2              	31.59%
Bootstrap support for L0PFW1 as seed ortholog is 100%.
Bootstrap support for P23220 as seed ortholog is 100%.

Group of orthologs #119. Best score 606 bits
Score difference with first non-orthologous sequence - P.jiroveci:498 S.scrofa:408

L0PGT9              	100.00%		F1S3C7              	100.00%
Bootstrap support for L0PGT9 as seed ortholog is 100%.
Bootstrap support for F1S3C7 as seed ortholog is 100%.

Group of orthologs #120. Best score 606 bits
Score difference with first non-orthologous sequence - P.jiroveci:606 S.scrofa:351

L0PAR0              	100.00%		F2Z562              	100.00%
Bootstrap support for L0PAR0 as seed ortholog is 100%.
Bootstrap support for F2Z562 as seed ortholog is 100%.

Group of orthologs #121. Best score 605 bits
Score difference with first non-orthologous sequence - P.jiroveci:605 S.scrofa:605

L0PDD5              	100.00%		F1SLY8              	100.00%
Bootstrap support for L0PDD5 as seed ortholog is 100%.
Bootstrap support for F1SLY8 as seed ortholog is 100%.

Group of orthologs #122. Best score 604 bits
Score difference with first non-orthologous sequence - P.jiroveci:604 S.scrofa:205

L0PC37              	100.00%		F1RHF7              	100.00%
Bootstrap support for L0PC37 as seed ortholog is 100%.
Bootstrap support for F1RHF7 as seed ortholog is 99%.

Group of orthologs #123. Best score 602 bits
Score difference with first non-orthologous sequence - P.jiroveci:602 S.scrofa:602

L0PF80              	100.00%		I3L712              	100.00%
Bootstrap support for L0PF80 as seed ortholog is 100%.
Bootstrap support for I3L712 as seed ortholog is 100%.

Group of orthologs #124. Best score 601 bits
Score difference with first non-orthologous sequence - P.jiroveci:601 S.scrofa:601

L0P7N3              	100.00%		F1SKI5              	100.00%
                    	       		F1SML7              	54.52%
Bootstrap support for L0P7N3 as seed ortholog is 100%.
Bootstrap support for F1SKI5 as seed ortholog is 100%.

Group of orthologs #125. Best score 597 bits
Score difference with first non-orthologous sequence - P.jiroveci:410 S.scrofa:387

L0P853              	100.00%		F1SAJ5              	100.00%
L0P8M8              	55.04%		
Bootstrap support for L0P853 as seed ortholog is 100%.
Bootstrap support for F1SAJ5 as seed ortholog is 100%.

Group of orthologs #126. Best score 597 bits
Score difference with first non-orthologous sequence - P.jiroveci:597 S.scrofa:597

L0PFI9              	100.00%		F1S4P6              	100.00%
Bootstrap support for L0PFI9 as seed ortholog is 100%.
Bootstrap support for F1S4P6 as seed ortholog is 100%.

Group of orthologs #127. Best score 595 bits
Score difference with first non-orthologous sequence - P.jiroveci:422 S.scrofa:376

L0P850              	100.00%		F1SC64              	100.00%
Bootstrap support for L0P850 as seed ortholog is 100%.
Bootstrap support for F1SC64 as seed ortholog is 100%.

Group of orthologs #128. Best score 592 bits
Score difference with first non-orthologous sequence - P.jiroveci:592 S.scrofa:592

L0P8W6              	100.00%		F1RZ24              	100.00%
Bootstrap support for L0P8W6 as seed ortholog is 100%.
Bootstrap support for F1RZ24 as seed ortholog is 100%.

Group of orthologs #129. Best score 591 bits
Score difference with first non-orthologous sequence - P.jiroveci:591 S.scrofa:591

L0PCV7              	100.00%		I3LJI6              	100.00%
                    	       		I3LJ02              	85.52%
Bootstrap support for L0PCV7 as seed ortholog is 100%.
Bootstrap support for I3LJI6 as seed ortholog is 100%.

Group of orthologs #130. Best score 589 bits
Score difference with first non-orthologous sequence - P.jiroveci:209 S.scrofa:41

L0PBH4              	100.00%		P61292              	100.00%
                    	       		Q2EHH8              	16.84%
Bootstrap support for L0PBH4 as seed ortholog is 100%.
Bootstrap support for P61292 as seed ortholog is 94%.

Group of orthologs #131. Best score 586 bits
Score difference with first non-orthologous sequence - P.jiroveci:407 S.scrofa:173

L0PDY0              	100.00%		F1RX16              	100.00%
                    	       		I3LDV0              	90.25%
Bootstrap support for L0PDY0 as seed ortholog is 100%.
Bootstrap support for F1RX16 as seed ortholog is 99%.

Group of orthologs #132. Best score 584 bits
Score difference with first non-orthologous sequence - P.jiroveci:584 S.scrofa:584

L0P917              	100.00%		F1RZV7              	100.00%
L0PF20              	85.75%		
Bootstrap support for L0P917 as seed ortholog is 100%.
Bootstrap support for F1RZV7 as seed ortholog is 100%.

Group of orthologs #133. Best score 582 bits
Score difference with first non-orthologous sequence - P.jiroveci:582 S.scrofa:582

L0P958              	100.00%		F1S8S9              	100.00%
Bootstrap support for L0P958 as seed ortholog is 100%.
Bootstrap support for F1S8S9 as seed ortholog is 100%.

Group of orthologs #134. Best score 581 bits
Score difference with first non-orthologous sequence - P.jiroveci:581 S.scrofa:581

L0PDR3              	100.00%		P00889              	100.00%
Bootstrap support for L0PDR3 as seed ortholog is 100%.
Bootstrap support for P00889 as seed ortholog is 100%.

Group of orthologs #135. Best score 580 bits
Score difference with first non-orthologous sequence - P.jiroveci:580 S.scrofa:580

L0P7T0              	100.00%		I3LHM3              	100.00%
                    	       		I3LTP0              	22.46%
                    	       		F1SEV4              	16.39%
Bootstrap support for L0P7T0 as seed ortholog is 100%.
Bootstrap support for I3LHM3 as seed ortholog is 100%.

Group of orthologs #136. Best score 579 bits
Score difference with first non-orthologous sequence - P.jiroveci:579 S.scrofa:579

L0PB97              	100.00%		P54612              	100.00%
                    	       		P54613              	77.37%
Bootstrap support for L0PB97 as seed ortholog is 100%.
Bootstrap support for P54612 as seed ortholog is 100%.

Group of orthologs #137. Best score 577 bits
Score difference with first non-orthologous sequence - P.jiroveci:577 S.scrofa:577

L0PA45              	100.00%		F1SII4              	100.00%
Bootstrap support for L0PA45 as seed ortholog is 100%.
Bootstrap support for F1SII4 as seed ortholog is 100%.

Group of orthologs #138. Best score 577 bits
Score difference with first non-orthologous sequence - P.jiroveci:577 S.scrofa:577

L0PDU2              	100.00%		F1SKT8              	100.00%
Bootstrap support for L0PDU2 as seed ortholog is 100%.
Bootstrap support for F1SKT8 as seed ortholog is 100%.

Group of orthologs #139. Best score 572 bits
Score difference with first non-orthologous sequence - P.jiroveci:369 S.scrofa:319

L0PC64              	100.00%		A6M931              	100.00%
Bootstrap support for L0PC64 as seed ortholog is 100%.
Bootstrap support for A6M931 as seed ortholog is 100%.

Group of orthologs #140. Best score 571 bits
Score difference with first non-orthologous sequence - P.jiroveci:571 S.scrofa:571

L0PFT7              	100.00%		D2KPI8              	100.00%
Bootstrap support for L0PFT7 as seed ortholog is 100%.
Bootstrap support for D2KPI8 as seed ortholog is 100%.

Group of orthologs #141. Best score 571 bits
Score difference with first non-orthologous sequence - P.jiroveci:494 S.scrofa:465

L0PCS2              	100.00%		F1S7C4              	100.00%
Bootstrap support for L0PCS2 as seed ortholog is 100%.
Bootstrap support for F1S7C4 as seed ortholog is 100%.

Group of orthologs #142. Best score 570 bits
Score difference with first non-orthologous sequence - P.jiroveci:570 S.scrofa:570

L0PBM4              	100.00%		F1SJ69              	100.00%
                    	       		F1S9U7              	30.87%
Bootstrap support for L0PBM4 as seed ortholog is 100%.
Bootstrap support for F1SJ69 as seed ortholog is 100%.

Group of orthologs #143. Best score 570 bits
Score difference with first non-orthologous sequence - P.jiroveci:570 S.scrofa:570

L0PCA7              	100.00%		F1RLI4              	100.00%
Bootstrap support for L0PCA7 as seed ortholog is 100%.
Bootstrap support for F1RLI4 as seed ortholog is 100%.

Group of orthologs #144. Best score 569 bits
Score difference with first non-orthologous sequence - P.jiroveci:569 S.scrofa:569

L0PES7              	100.00%		P10173              	100.00%
Bootstrap support for L0PES7 as seed ortholog is 100%.
Bootstrap support for P10173 as seed ortholog is 100%.

Group of orthologs #145. Best score 566 bits
Score difference with first non-orthologous sequence - P.jiroveci:566 S.scrofa:566

L0PG37              	100.00%		A5GFQ9              	100.00%
                    	       		F1S9Y5              	21.71%
                    	       		F1S2V7              	9.15%
                    	       		F1RQR5              	7.75%
Bootstrap support for L0PG37 as seed ortholog is 100%.
Bootstrap support for A5GFQ9 as seed ortholog is 100%.

Group of orthologs #146. Best score 566 bits
Score difference with first non-orthologous sequence - P.jiroveci:566 S.scrofa:187

L0PBW1              	100.00%		F1RTU5              	100.00%
                    	       		F1SV93              	41.54%
                    	       		I3L9F7              	41.14%
Bootstrap support for L0PBW1 as seed ortholog is 100%.
Bootstrap support for F1RTU5 as seed ortholog is 99%.

Group of orthologs #147. Best score 566 bits
Score difference with first non-orthologous sequence - P.jiroveci:566 S.scrofa:182

L0PA75              	100.00%		F2Z5I7              	100.00%
Bootstrap support for L0PA75 as seed ortholog is 100%.
Bootstrap support for F2Z5I7 as seed ortholog is 100%.

Group of orthologs #148. Best score 566 bits
Score difference with first non-orthologous sequence - P.jiroveci:566 S.scrofa:566

L0P8P8              	100.00%		P08059              	100.00%
Bootstrap support for L0P8P8 as seed ortholog is 100%.
Bootstrap support for P08059 as seed ortholog is 100%.

Group of orthologs #149. Best score 564 bits
Score difference with first non-orthologous sequence - P.jiroveci:564 S.scrofa:564

L0PBN0              	100.00%		F1SS25              	100.00%
Bootstrap support for L0PBN0 as seed ortholog is 100%.
Bootstrap support for F1SS25 as seed ortholog is 100%.

Group of orthologs #150. Best score 561 bits
Score difference with first non-orthologous sequence - P.jiroveci:27 S.scrofa:79

L0PGY9              	100.00%		F1RZK8              	100.00%
                    	       		I3LG31              	49.31%
                    	       		F1SV89              	20.86%
Bootstrap support for L0PGY9 as seed ortholog is 76%.
Bootstrap support for F1RZK8 as seed ortholog is 96%.

Group of orthologs #151. Best score 554 bits
Score difference with first non-orthologous sequence - P.jiroveci:554 S.scrofa:554

L0PC44              	100.00%		F1RYA3              	100.00%
Bootstrap support for L0PC44 as seed ortholog is 100%.
Bootstrap support for F1RYA3 as seed ortholog is 100%.

Group of orthologs #152. Best score 552 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 S.scrofa:288

L0P7D9              	100.00%		P67776              	100.00%
                    	       		P11493              	60.40%
Bootstrap support for L0P7D9 as seed ortholog is 100%.
Bootstrap support for P67776 as seed ortholog is 100%.

Group of orthologs #153. Best score 551 bits
Score difference with first non-orthologous sequence - P.jiroveci:459 S.scrofa:278

L0PCT0              	100.00%		I3LNN1              	100.00%
Bootstrap support for L0PCT0 as seed ortholog is 100%.
Bootstrap support for I3LNN1 as seed ortholog is 100%.

Group of orthologs #154. Best score 550 bits
Score difference with first non-orthologous sequence - P.jiroveci:550 S.scrofa:550

L0PA85              	100.00%		F1SAU5              	100.00%
Bootstrap support for L0PA85 as seed ortholog is 100%.
Bootstrap support for F1SAU5 as seed ortholog is 100%.

Group of orthologs #155. Best score 547 bits
Score difference with first non-orthologous sequence - P.jiroveci:547 S.scrofa:547

L0PCT1              	100.00%		F1RU72              	100.00%
Bootstrap support for L0PCT1 as seed ortholog is 100%.
Bootstrap support for F1RU72 as seed ortholog is 100%.

Group of orthologs #156. Best score 542 bits
Score difference with first non-orthologous sequence - P.jiroveci:260 S.scrofa:542

L0PCC4              	100.00%		F1SMW9              	100.00%
Bootstrap support for L0PCC4 as seed ortholog is 100%.
Bootstrap support for F1SMW9 as seed ortholog is 100%.

Group of orthologs #157. Best score 539 bits
Score difference with first non-orthologous sequence - P.jiroveci:539 S.scrofa:539

L0PCP1              	100.00%		I3L655              	100.00%
Bootstrap support for L0PCP1 as seed ortholog is 100%.
Bootstrap support for I3L655 as seed ortholog is 100%.

Group of orthologs #158. Best score 537 bits
Score difference with first non-orthologous sequence - P.jiroveci:470 S.scrofa:537

L0PA93              	100.00%		F1RX50              	100.00%
Bootstrap support for L0PA93 as seed ortholog is 100%.
Bootstrap support for F1RX50 as seed ortholog is 100%.

Group of orthologs #159. Best score 536 bits
Score difference with first non-orthologous sequence - P.jiroveci:536 S.scrofa:536

L0PBR9              	100.00%		D0G777              	100.00%
                    	       		F1SER1              	61.36%
Bootstrap support for L0PBR9 as seed ortholog is 100%.
Bootstrap support for D0G777 as seed ortholog is 100%.

Group of orthologs #160. Best score 535 bits
Score difference with first non-orthologous sequence - P.jiroveci:535 S.scrofa:424

L0P802              	100.00%		I3LS00              	100.00%
                    	       		F1SV06              	57.18%
                    	       		F1SDR6              	39.23%
Bootstrap support for L0P802 as seed ortholog is 100%.
Bootstrap support for I3LS00 as seed ortholog is 100%.

Group of orthologs #161. Best score 533 bits
Score difference with first non-orthologous sequence - P.jiroveci:533 S.scrofa:198

L0P905              	100.00%		F1S8V9              	100.00%
                    	       		F1RTA1              	32.71%
                    	       		F1RLT0              	24.62%
                    	       		F1SK59              	24.26%
                    	       		F1RLT1              	12.01%
                    	       		F1RP55              	8.45%
                    	       		F1RP54              	8.41%
                    	       		F1S9A6              	6.93%
Bootstrap support for L0P905 as seed ortholog is 100%.
Bootstrap support for F1S8V9 as seed ortholog is 99%.

Group of orthologs #162. Best score 531 bits
Score difference with first non-orthologous sequence - P.jiroveci:531 S.scrofa:415

L0PBU6              	100.00%		F1RSY9              	100.00%
Bootstrap support for L0PBU6 as seed ortholog is 100%.
Bootstrap support for F1RSY9 as seed ortholog is 100%.

Group of orthologs #163. Best score 531 bits
Score difference with first non-orthologous sequence - P.jiroveci:531 S.scrofa:343

L0P7Y5              	100.00%		P09623              	100.00%
Bootstrap support for L0P7Y5 as seed ortholog is 100%.
Bootstrap support for P09623 as seed ortholog is 100%.

Group of orthologs #164. Best score 530 bits
Score difference with first non-orthologous sequence - P.jiroveci:530 S.scrofa:530

L0PC93              	100.00%		F2Z5G2              	100.00%
Bootstrap support for L0PC93 as seed ortholog is 100%.
Bootstrap support for F2Z5G2 as seed ortholog is 100%.

Group of orthologs #165. Best score 529 bits
Score difference with first non-orthologous sequence - P.jiroveci:529 S.scrofa:529

L0PAN4              	100.00%		I3L7Q4              	100.00%
Bootstrap support for L0PAN4 as seed ortholog is 100%.
Bootstrap support for I3L7Q4 as seed ortholog is 100%.

Group of orthologs #166. Best score 529 bits
Score difference with first non-orthologous sequence - P.jiroveci:529 S.scrofa:328

L0PB12              	100.00%		I3LKR1              	100.00%
Bootstrap support for L0PB12 as seed ortholog is 100%.
Bootstrap support for I3LKR1 as seed ortholog is 100%.

Group of orthologs #167. Best score 527 bits
Score difference with first non-orthologous sequence - P.jiroveci:409 S.scrofa:284

L0P7V6              	100.00%		A6M930              	100.00%
                    	       		A6M928              	74.47%
                    	       		I3LLD5              	65.25%
Bootstrap support for L0P7V6 as seed ortholog is 100%.
Bootstrap support for A6M930 as seed ortholog is 100%.

Group of orthologs #168. Best score 526 bits
Score difference with first non-orthologous sequence - P.jiroveci:526 S.scrofa:298

L0P9I8              	100.00%		F1S182              	100.00%
                    	       		I3L6Y6              	97.71%
                    	       		I3LV02              	74.50%
Bootstrap support for L0P9I8 as seed ortholog is 100%.
Bootstrap support for F1S182 as seed ortholog is 100%.

Group of orthologs #169. Best score 521 bits
Score difference with first non-orthologous sequence - P.jiroveci:521 S.scrofa:341

L0P6Y2              	100.00%		B6UV57              	100.00%
Bootstrap support for L0P6Y2 as seed ortholog is 100%.
Bootstrap support for B6UV57 as seed ortholog is 100%.

Group of orthologs #170. Best score 520 bits
Score difference with first non-orthologous sequence - P.jiroveci:247 S.scrofa:339

L0PBI1              	100.00%		F1RI15              	100.00%
                    	       		F1RRA7              	50.09%
                    	       		F1RST0              	48.25%
Bootstrap support for L0PBI1 as seed ortholog is 99%.
Bootstrap support for F1RI15 as seed ortholog is 100%.

Group of orthologs #171. Best score 518 bits
Score difference with first non-orthologous sequence - P.jiroveci:518 S.scrofa:254

L0P718              	100.00%		F1RWW3              	100.00%
Bootstrap support for L0P718 as seed ortholog is 100%.
Bootstrap support for F1RWW3 as seed ortholog is 99%.

Group of orthologs #172. Best score 516 bits
Score difference with first non-orthologous sequence - P.jiroveci:516 S.scrofa:516

L0P8Z9              	100.00%		F1SKG2              	100.00%
Bootstrap support for L0P8Z9 as seed ortholog is 100%.
Bootstrap support for F1SKG2 as seed ortholog is 100%.

Group of orthologs #173. Best score 513 bits
Score difference with first non-orthologous sequence - P.jiroveci:513 S.scrofa:272

L0PET9              	100.00%		K7GRB9              	100.00%
                    	       		F1RVC1              	74.76%
Bootstrap support for L0PET9 as seed ortholog is 100%.
Bootstrap support for K7GRB9 as seed ortholog is 100%.

Group of orthologs #174. Best score 513 bits
Score difference with first non-orthologous sequence - P.jiroveci:392 S.scrofa:303

L0PEP2              	100.00%		F1RY50              	100.00%
Bootstrap support for L0PEP2 as seed ortholog is 100%.
Bootstrap support for F1RY50 as seed ortholog is 100%.

Group of orthologs #175. Best score 512 bits
Score difference with first non-orthologous sequence - P.jiroveci:512 S.scrofa:512

L0PAN9              	100.00%		Q1W675              	100.00%
L0PID8              	83.02%		
Bootstrap support for L0PAN9 as seed ortholog is 100%.
Bootstrap support for Q1W675 as seed ortholog is 100%.

Group of orthologs #176. Best score 510 bits
Score difference with first non-orthologous sequence - P.jiroveci:510 S.scrofa:510

L0PCX1              	100.00%		F1SL74              	100.00%
Bootstrap support for L0PCX1 as seed ortholog is 100%.
Bootstrap support for F1SL74 as seed ortholog is 100%.

Group of orthologs #177. Best score 507 bits
Score difference with first non-orthologous sequence - P.jiroveci:454 S.scrofa:507

L0P7R1              	100.00%		F1S0D9              	100.00%
Bootstrap support for L0P7R1 as seed ortholog is 100%.
Bootstrap support for F1S0D9 as seed ortholog is 100%.

Group of orthologs #178. Best score 504 bits
Score difference with first non-orthologous sequence - P.jiroveci:504 S.scrofa:119

L0P9A8              	100.00%		F1SR85              	100.00%
L0PHB9              	76.38%		
Bootstrap support for L0P9A8 as seed ortholog is 100%.
Bootstrap support for F1SR85 as seed ortholog is 99%.

Group of orthologs #179. Best score 504 bits
Score difference with first non-orthologous sequence - P.jiroveci:504 S.scrofa:504

L0PGE8              	100.00%		F1S2M9              	100.00%
Bootstrap support for L0PGE8 as seed ortholog is 100%.
Bootstrap support for F1S2M9 as seed ortholog is 100%.

Group of orthologs #180. Best score 504 bits
Score difference with first non-orthologous sequence - P.jiroveci:504 S.scrofa:504

L0PB50              	100.00%		I3LSP1              	100.00%
Bootstrap support for L0PB50 as seed ortholog is 100%.
Bootstrap support for I3LSP1 as seed ortholog is 100%.

Group of orthologs #181. Best score 502 bits
Score difference with first non-orthologous sequence - P.jiroveci:502 S.scrofa:403

L0P7N1              	100.00%		F1RUJ9              	100.00%
                    	       		I3LNK5              	50.85%
Bootstrap support for L0P7N1 as seed ortholog is 100%.
Bootstrap support for F1RUJ9 as seed ortholog is 100%.

Group of orthologs #182. Best score 502 bits
Score difference with first non-orthologous sequence - P.jiroveci:279 S.scrofa:195

L0P8E8              	100.00%		F1SC89              	100.00%
L0PEB0              	100.00%		
Bootstrap support for L0P8E8 as seed ortholog is 100%.
Bootstrap support for L0PEB0 as seed ortholog is 100%.
Bootstrap support for F1SC89 as seed ortholog is 99%.

Group of orthologs #183. Best score 501 bits
Score difference with first non-orthologous sequence - P.jiroveci:370 S.scrofa:501

L0PAC4              	100.00%		F1SCS4              	100.00%
L0P871              	98.17%		
Bootstrap support for L0PAC4 as seed ortholog is 100%.
Bootstrap support for F1SCS4 as seed ortholog is 100%.

Group of orthologs #184. Best score 500 bits
Score difference with first non-orthologous sequence - P.jiroveci:500 S.scrofa:500

L0PBG8              	100.00%		F1S3T1              	100.00%
Bootstrap support for L0PBG8 as seed ortholog is 100%.
Bootstrap support for F1S3T1 as seed ortholog is 100%.

Group of orthologs #185. Best score 500 bits
Score difference with first non-orthologous sequence - P.jiroveci:500 S.scrofa:390

L0P890              	100.00%		F1SKP7              	100.00%
Bootstrap support for L0P890 as seed ortholog is 100%.
Bootstrap support for F1SKP7 as seed ortholog is 100%.

Group of orthologs #186. Best score 499 bits
Score difference with first non-orthologous sequence - P.jiroveci:499 S.scrofa:499

L0PBV4              	100.00%		F1SU85              	100.00%
Bootstrap support for L0PBV4 as seed ortholog is 100%.
Bootstrap support for F1SU85 as seed ortholog is 100%.

Group of orthologs #187. Best score 498 bits
Score difference with first non-orthologous sequence - P.jiroveci:498 S.scrofa:405

L0PDH7              	100.00%		B0M1M6              	100.00%
Bootstrap support for L0PDH7 as seed ortholog is 100%.
Bootstrap support for B0M1M6 as seed ortholog is 100%.

Group of orthologs #188. Best score 498 bits
Score difference with first non-orthologous sequence - P.jiroveci:498 S.scrofa:498

L0PFM4              	100.00%		F1RLR4              	100.00%
Bootstrap support for L0PFM4 as seed ortholog is 100%.
Bootstrap support for F1RLR4 as seed ortholog is 100%.

Group of orthologs #189. Best score 498 bits
Score difference with first non-orthologous sequence - P.jiroveci:498 S.scrofa:382

L0PDG5              	100.00%		I3LUN6              	100.00%
Bootstrap support for L0PDG5 as seed ortholog is 100%.
Bootstrap support for I3LUN6 as seed ortholog is 100%.

Group of orthologs #190. Best score 497 bits
Score difference with first non-orthologous sequence - P.jiroveci:497 S.scrofa:497

L0PAS3              	100.00%		F1S129              	100.00%
                    	       		F1RHC7              	36.72%
Bootstrap support for L0PAS3 as seed ortholog is 100%.
Bootstrap support for F1S129 as seed ortholog is 100%.

Group of orthologs #191. Best score 496 bits
Score difference with first non-orthologous sequence - P.jiroveci:496 S.scrofa:379

L0PEZ0              	100.00%		I3LN04              	100.00%
Bootstrap support for L0PEZ0 as seed ortholog is 100%.
Bootstrap support for I3LN04 as seed ortholog is 100%.

Group of orthologs #192. Best score 495 bits
Score difference with first non-orthologous sequence - P.jiroveci:136 S.scrofa:226

L0PBP3              	100.00%		F1RN43              	100.00%
                    	       		F1RUC1              	24.29%
Bootstrap support for L0PBP3 as seed ortholog is 99%.
Bootstrap support for F1RN43 as seed ortholog is 99%.

Group of orthologs #193. Best score 491 bits
Score difference with first non-orthologous sequence - P.jiroveci:491 S.scrofa:345

L0PFQ5              	100.00%		F1RL99              	100.00%
Bootstrap support for L0PFQ5 as seed ortholog is 100%.
Bootstrap support for F1RL99 as seed ortholog is 100%.

Group of orthologs #194. Best score 490 bits
Score difference with first non-orthologous sequence - P.jiroveci:369 S.scrofa:356

L0PE30              	100.00%		F2Z5I5              	100.00%
                    	       		F1RFS8              	20.82%
Bootstrap support for L0PE30 as seed ortholog is 100%.
Bootstrap support for F2Z5I5 as seed ortholog is 100%.

Group of orthologs #195. Best score 490 bits
Score difference with first non-orthologous sequence - P.jiroveci:490 S.scrofa:490

L0PFZ9              	100.00%		F1SH14              	100.00%
Bootstrap support for L0PFZ9 as seed ortholog is 100%.
Bootstrap support for F1SH14 as seed ortholog is 100%.

Group of orthologs #196. Best score 490 bits
Score difference with first non-orthologous sequence - P.jiroveci:313 S.scrofa:490

L0PFN9              	100.00%		F2Z5M9              	100.00%
Bootstrap support for L0PFN9 as seed ortholog is 100%.
Bootstrap support for F2Z5M9 as seed ortholog is 100%.

Group of orthologs #197. Best score 488 bits
Score difference with first non-orthologous sequence - P.jiroveci:488 S.scrofa:488

L0PG55              	100.00%		Q6Q7J2              	100.00%
                    	       		I3L893              	76.04%
Bootstrap support for L0PG55 as seed ortholog is 100%.
Bootstrap support for Q6Q7J2 as seed ortholog is 100%.

Group of orthologs #198. Best score 487 bits
Score difference with first non-orthologous sequence - P.jiroveci:487 S.scrofa:487

L0PB35              	100.00%		I3LUM9              	100.00%
                    	       		I3L7F7              	37.72%
Bootstrap support for L0PB35 as seed ortholog is 100%.
Bootstrap support for I3LUM9 as seed ortholog is 100%.

Group of orthologs #199. Best score 487 bits
Score difference with first non-orthologous sequence - P.jiroveci:487 S.scrofa:395

L0P9G2              	100.00%		F1RFI1              	100.00%
Bootstrap support for L0P9G2 as seed ortholog is 100%.
Bootstrap support for F1RFI1 as seed ortholog is 100%.

Group of orthologs #200. Best score 486 bits
Score difference with first non-orthologous sequence - P.jiroveci:486 S.scrofa:7

L0PF72              	100.00%		F1RRW8              	100.00%
                    	       		F1S593              	60.63%
                    	       		I3LCZ7              	40.10%
Bootstrap support for L0PF72 as seed ortholog is 100%.
Bootstrap support for F1RRW8 as seed ortholog is 53%.
Alternative seed ortholog is I3LR66 (7 bits away from this cluster)

Group of orthologs #201. Best score 486 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 S.scrofa:286

L0PAI4              	100.00%		Q9GKE7              	100.00%
                    	       		F1RIY2              	67.71%
Bootstrap support for L0PAI4 as seed ortholog is 84%.
Bootstrap support for Q9GKE7 as seed ortholog is 100%.

Group of orthologs #202. Best score 485 bits
Score difference with first non-orthologous sequence - P.jiroveci:485 S.scrofa:372

L0PGH3              	100.00%		F1RPH3              	100.00%
Bootstrap support for L0PGH3 as seed ortholog is 100%.
Bootstrap support for F1RPH3 as seed ortholog is 100%.

Group of orthologs #203. Best score 484 bits
Score difference with first non-orthologous sequence - P.jiroveci:484 S.scrofa:484

L0P6T3              	100.00%		P00506              	100.00%
Bootstrap support for L0P6T3 as seed ortholog is 100%.
Bootstrap support for P00506 as seed ortholog is 100%.

Group of orthologs #204. Best score 483 bits
Score difference with first non-orthologous sequence - P.jiroveci:221 S.scrofa:174

L0PHY6              	100.00%		I3LB64              	100.00%
                    	       		F1S895              	97.44%
Bootstrap support for L0PHY6 as seed ortholog is 100%.
Bootstrap support for I3LB64 as seed ortholog is 99%.

Group of orthologs #205. Best score 482 bits
Score difference with first non-orthologous sequence - P.jiroveci:263 S.scrofa:320

L0PF08              	100.00%		K7GMY6              	100.00%
                    	       		F1RMA8              	50.08%
                    	       		F1S100              	18.31%
Bootstrap support for L0PF08 as seed ortholog is 100%.
Bootstrap support for K7GMY6 as seed ortholog is 100%.

Group of orthologs #206. Best score 482 bits
Score difference with first non-orthologous sequence - P.jiroveci:482 S.scrofa:482

L0P7P1              	100.00%		F1RJJ2              	100.00%
Bootstrap support for L0P7P1 as seed ortholog is 100%.
Bootstrap support for F1RJJ2 as seed ortholog is 100%.

Group of orthologs #207. Best score 482 bits
Score difference with first non-orthologous sequence - P.jiroveci:482 S.scrofa:482

L0PAP1              	100.00%		F1RNB0              	100.00%
Bootstrap support for L0PAP1 as seed ortholog is 100%.
Bootstrap support for F1RNB0 as seed ortholog is 100%.

Group of orthologs #208. Best score 482 bits
Score difference with first non-orthologous sequence - P.jiroveci:482 S.scrofa:482

L0PC09              	100.00%		I3LEJ8              	100.00%
Bootstrap support for L0PC09 as seed ortholog is 100%.
Bootstrap support for I3LEJ8 as seed ortholog is 100%.

Group of orthologs #209. Best score 480 bits
Score difference with first non-orthologous sequence - P.jiroveci:480 S.scrofa:480

L0PCY5              	100.00%		F1RGD9              	100.00%
                    	       		F1RGD8              	50.19%
Bootstrap support for L0PCY5 as seed ortholog is 100%.
Bootstrap support for F1RGD9 as seed ortholog is 100%.

Group of orthologs #210. Best score 480 bits
Score difference with first non-orthologous sequence - P.jiroveci:416 S.scrofa:409

L0P992              	100.00%		I3LV46              	100.00%
                    	       		I3LKT8              	52.59%
Bootstrap support for L0P992 as seed ortholog is 100%.
Bootstrap support for I3LV46 as seed ortholog is 100%.

Group of orthologs #211. Best score 480 bits
Score difference with first non-orthologous sequence - P.jiroveci:480 S.scrofa:480

L0P8F1              	100.00%		Q29090              	100.00%
                    	       		P54614              	67.77%
Bootstrap support for L0P8F1 as seed ortholog is 100%.
Bootstrap support for Q29090 as seed ortholog is 100%.

Group of orthologs #212. Best score 478 bits
Score difference with first non-orthologous sequence - P.jiroveci:478 S.scrofa:323

L0PAA4              	100.00%		F1SE08              	100.00%
                    	       		F1SBJ7              	45.18%
Bootstrap support for L0PAA4 as seed ortholog is 100%.
Bootstrap support for F1SE08 as seed ortholog is 100%.

Group of orthologs #213. Best score 478 bits
Score difference with first non-orthologous sequence - P.jiroveci:377 S.scrofa:257

L0PC38              	100.00%		B5APU3              	100.00%
Bootstrap support for L0PC38 as seed ortholog is 100%.
Bootstrap support for B5APU3 as seed ortholog is 100%.

Group of orthologs #214. Best score 478 bits
Score difference with first non-orthologous sequence - P.jiroveci:478 S.scrofa:478

L0PEL0              	100.00%		F1S1X3              	100.00%
Bootstrap support for L0PEL0 as seed ortholog is 100%.
Bootstrap support for F1S1X3 as seed ortholog is 100%.

Group of orthologs #215. Best score 476 bits
Score difference with first non-orthologous sequence - P.jiroveci:366 S.scrofa:476

L0PDC9              	100.00%		F1SLA0              	100.00%
Bootstrap support for L0PDC9 as seed ortholog is 100%.
Bootstrap support for F1SLA0 as seed ortholog is 100%.

Group of orthologs #216. Best score 474 bits
Score difference with first non-orthologous sequence - P.jiroveci:302 S.scrofa:179

L0PB67              	100.00%		I3LN61              	100.00%
                    	       		F1RY93              	64.41%
Bootstrap support for L0PB67 as seed ortholog is 100%.
Bootstrap support for I3LN61 as seed ortholog is 99%.

Group of orthologs #217. Best score 470 bits
Score difference with first non-orthologous sequence - P.jiroveci:365 S.scrofa:318

L0P8C2              	100.00%		I3LTI2              	100.00%
Bootstrap support for L0P8C2 as seed ortholog is 100%.
Bootstrap support for I3LTI2 as seed ortholog is 100%.

Group of orthologs #218. Best score 469 bits
Score difference with first non-orthologous sequence - P.jiroveci:469 S.scrofa:469

L0PCS3              	100.00%		I3LKG9              	100.00%
Bootstrap support for L0PCS3 as seed ortholog is 100%.
Bootstrap support for I3LKG9 as seed ortholog is 100%.

Group of orthologs #219. Best score 467 bits
Score difference with first non-orthologous sequence - P.jiroveci:467 S.scrofa:467

L0PC82              	100.00%		F1SMG8              	100.00%
                    	       		O02734              	28.97%
Bootstrap support for L0PC82 as seed ortholog is 100%.
Bootstrap support for F1SMG8 as seed ortholog is 100%.

Group of orthologs #220. Best score 467 bits
Score difference with first non-orthologous sequence - P.jiroveci:467 S.scrofa:467

L0PDM3              	100.00%		F1RU38              	100.00%
Bootstrap support for L0PDM3 as seed ortholog is 100%.
Bootstrap support for F1RU38 as seed ortholog is 100%.

Group of orthologs #221. Best score 464 bits
Score difference with first non-orthologous sequence - P.jiroveci:193 S.scrofa:332

L0P8N1              	100.00%		F1SQN1              	100.00%
Bootstrap support for L0P8N1 as seed ortholog is 100%.
Bootstrap support for F1SQN1 as seed ortholog is 100%.

Group of orthologs #222. Best score 462 bits
Score difference with first non-orthologous sequence - P.jiroveci:462 S.scrofa:418

L0P9V7              	100.00%		F1SU53              	100.00%
                    	       		F1S155              	26.32%
Bootstrap support for L0P9V7 as seed ortholog is 100%.
Bootstrap support for F1SU53 as seed ortholog is 100%.

Group of orthologs #223. Best score 461 bits
Score difference with first non-orthologous sequence - P.jiroveci:461 S.scrofa:397

L0P9C8              	100.00%		P79303              	100.00%
                    	       		F1SIX3              	68.49%
Bootstrap support for L0P9C8 as seed ortholog is 100%.
Bootstrap support for P79303 as seed ortholog is 100%.

Group of orthologs #224. Best score 461 bits
Score difference with first non-orthologous sequence - P.jiroveci:317 S.scrofa:169

L0PCD8              	100.00%		F1S9K1              	100.00%
Bootstrap support for L0PCD8 as seed ortholog is 100%.
Bootstrap support for F1S9K1 as seed ortholog is 99%.

Group of orthologs #225. Best score 459 bits
Score difference with first non-orthologous sequence - P.jiroveci:319 S.scrofa:298

L0PDA0              	100.00%		F1S034              	100.00%
                    	       		I3L6N6              	50.22%
Bootstrap support for L0PDA0 as seed ortholog is 100%.
Bootstrap support for F1S034 as seed ortholog is 100%.

Group of orthologs #226. Best score 457 bits
Score difference with first non-orthologous sequence - P.jiroveci:457 S.scrofa:457

L0PBV8              	100.00%		F1SSB8              	100.00%
Bootstrap support for L0PBV8 as seed ortholog is 100%.
Bootstrap support for F1SSB8 as seed ortholog is 100%.

Group of orthologs #227. Best score 456 bits
Score difference with first non-orthologous sequence - P.jiroveci:456 S.scrofa:456

L0PG05              	100.00%		F1SAP4              	100.00%
Bootstrap support for L0PG05 as seed ortholog is 100%.
Bootstrap support for F1SAP4 as seed ortholog is 100%.

Group of orthologs #228. Best score 456 bits
Score difference with first non-orthologous sequence - P.jiroveci:456 S.scrofa:456

L0PFR4              	100.00%		F1SIL5              	100.00%
Bootstrap support for L0PFR4 as seed ortholog is 100%.
Bootstrap support for F1SIL5 as seed ortholog is 100%.

Group of orthologs #229. Best score 455 bits
Score difference with first non-orthologous sequence - P.jiroveci:455 S.scrofa:455

L0P9C9              	100.00%		F1RQM2              	100.00%
Bootstrap support for L0P9C9 as seed ortholog is 100%.
Bootstrap support for F1RQM2 as seed ortholog is 100%.

Group of orthologs #230. Best score 455 bits
Score difference with first non-orthologous sequence - P.jiroveci:455 S.scrofa:455

L0PF23              	100.00%		F1S5N0              	100.00%
Bootstrap support for L0PF23 as seed ortholog is 100%.
Bootstrap support for F1S5N0 as seed ortholog is 100%.

Group of orthologs #231. Best score 455 bits
Score difference with first non-orthologous sequence - P.jiroveci:455 S.scrofa:455

L0PBT8              	100.00%		F1SAA1              	100.00%
Bootstrap support for L0PBT8 as seed ortholog is 100%.
Bootstrap support for F1SAA1 as seed ortholog is 100%.

Group of orthologs #232. Best score 452 bits
Score difference with first non-orthologous sequence - P.jiroveci:452 S.scrofa:452

L0PER3              	100.00%		F1SD97              	100.00%
Bootstrap support for L0PER3 as seed ortholog is 100%.
Bootstrap support for F1SD97 as seed ortholog is 100%.

Group of orthologs #233. Best score 450 bits
Score difference with first non-orthologous sequence - P.jiroveci:450 S.scrofa:450

L0P7D2              	100.00%		F1SNL7              	100.00%
                    	       		F1SNL8              	14.23%
Bootstrap support for L0P7D2 as seed ortholog is 100%.
Bootstrap support for F1SNL7 as seed ortholog is 100%.

Group of orthologs #234. Best score 444 bits
Score difference with first non-orthologous sequence - P.jiroveci:444 S.scrofa:444

L0PF49              	100.00%		F1SQU5              	100.00%
Bootstrap support for L0PF49 as seed ortholog is 100%.
Bootstrap support for F1SQU5 as seed ortholog is 100%.

Group of orthologs #235. Best score 442 bits
Score difference with first non-orthologous sequence - P.jiroveci:442 S.scrofa:279

L0PHE4              	100.00%		F2Z5D2              	100.00%
                    	       		F1SSP6              	78.90%
Bootstrap support for L0PHE4 as seed ortholog is 100%.
Bootstrap support for F2Z5D2 as seed ortholog is 100%.

Group of orthologs #236. Best score 441 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 S.scrofa:191

L0PFS3              	100.00%		F2Z5N6              	100.00%
Bootstrap support for L0PFS3 as seed ortholog is 97%.
Bootstrap support for F2Z5N6 as seed ortholog is 100%.

Group of orthologs #237. Best score 440 bits
Score difference with first non-orthologous sequence - P.jiroveci:203 S.scrofa:20

L0PAW8              	100.00%		I3LHZ6              	100.00%
Bootstrap support for L0PAW8 as seed ortholog is 99%.
Bootstrap support for I3LHZ6 as seed ortholog is 68%.
Alternative seed ortholog is I3LG95 (20 bits away from this cluster)

Group of orthologs #238. Best score 438 bits
Score difference with first non-orthologous sequence - P.jiroveci:241 S.scrofa:141

L0PFB1              	100.00%		Q28948              	100.00%
                    	       		F1SMJ3              	50.37%
                    	       		Q09136              	18.50%
Bootstrap support for L0PFB1 as seed ortholog is 100%.
Bootstrap support for Q28948 as seed ortholog is 99%.

Group of orthologs #239. Best score 438 bits
Score difference with first non-orthologous sequence - P.jiroveci:342 S.scrofa:325

L0PAL3              	100.00%		B8Y466              	100.00%
                    	       		B7UCT2              	27.03%
Bootstrap support for L0PAL3 as seed ortholog is 100%.
Bootstrap support for B8Y466 as seed ortholog is 100%.

Group of orthologs #240. Best score 436 bits
Score difference with first non-orthologous sequence - P.jiroveci:280 S.scrofa:19

L0P9H5              	100.00%		F1S5K7              	100.00%
L0P8S4              	54.07%		F1SRU7              	30.02%
                    	       		F1RNJ0              	18.24%
                    	       		I3LR85              	13.90%
Bootstrap support for L0P9H5 as seed ortholog is 100%.
Bootstrap support for F1S5K7 as seed ortholog is 63%.
Alternative seed ortholog is F1S4D4 (19 bits away from this cluster)

Group of orthologs #241. Best score 436 bits
Score difference with first non-orthologous sequence - P.jiroveci:436 S.scrofa:117

L0PGV4              	100.00%		F1STD5              	100.00%
                    	       		F2Z5G5              	86.06%
Bootstrap support for L0PGV4 as seed ortholog is 100%.
Bootstrap support for F1STD5 as seed ortholog is 99%.

Group of orthologs #242. Best score 435 bits
Score difference with first non-orthologous sequence - P.jiroveci:435 S.scrofa:435

L0P9I4              	100.00%		F1RPE5              	100.00%
                    	       		I3LCX9              	70.23%
Bootstrap support for L0P9I4 as seed ortholog is 100%.
Bootstrap support for F1RPE5 as seed ortholog is 100%.

Group of orthologs #243. Best score 435 bits
Score difference with first non-orthologous sequence - P.jiroveci:435 S.scrofa:435

L0PAE9              	100.00%		F1S8A3              	100.00%
Bootstrap support for L0PAE9 as seed ortholog is 100%.
Bootstrap support for F1S8A3 as seed ortholog is 100%.

Group of orthologs #244. Best score 432 bits
Score difference with first non-orthologous sequence - P.jiroveci:432 S.scrofa:336

L0PF52              	100.00%		F1SF87              	100.00%
                    	       		I3L8T2              	26.73%
Bootstrap support for L0PF52 as seed ortholog is 100%.
Bootstrap support for F1SF87 as seed ortholog is 100%.

Group of orthologs #245. Best score 430 bits
Score difference with first non-orthologous sequence - P.jiroveci:430 S.scrofa:430

L0PFY1              	100.00%		A4Z6H0              	100.00%
                    	       		A4Z6H1              	55.42%
Bootstrap support for L0PFY1 as seed ortholog is 100%.
Bootstrap support for A4Z6H0 as seed ortholog is 100%.

Group of orthologs #246. Best score 429 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 S.scrofa:62

L0PGJ9              	100.00%		F1RP05              	100.00%
Bootstrap support for L0PGJ9 as seed ortholog is 99%.
Bootstrap support for F1RP05 as seed ortholog is 90%.

Group of orthologs #247. Best score 428 bits
Score difference with first non-orthologous sequence - P.jiroveci:428 S.scrofa:428

L0PEE3              	100.00%		F1SHL9              	100.00%
                    	       		I3LAK4              	33.64%
Bootstrap support for L0PEE3 as seed ortholog is 100%.
Bootstrap support for F1SHL9 as seed ortholog is 100%.

Group of orthologs #248. Best score 427 bits
Score difference with first non-orthologous sequence - P.jiroveci:427 S.scrofa:427

L0P9J7              	100.00%		F1SEX8              	100.00%
Bootstrap support for L0P9J7 as seed ortholog is 100%.
Bootstrap support for F1SEX8 as seed ortholog is 100%.

Group of orthologs #249. Best score 426 bits
Score difference with first non-orthologous sequence - P.jiroveci:426 S.scrofa:426

L0PF68              	100.00%		F1RY91              	100.00%
                    	       		I3L939              	63.98%
Bootstrap support for L0PF68 as seed ortholog is 100%.
Bootstrap support for F1RY91 as seed ortholog is 100%.

Group of orthologs #250. Best score 425 bits
Score difference with first non-orthologous sequence - P.jiroveci:425 S.scrofa:140

L0PBL0              	100.00%		F1SHM3              	100.00%
                    	       		I3LSH5              	25.61%
Bootstrap support for L0PBL0 as seed ortholog is 100%.
Bootstrap support for F1SHM3 as seed ortholog is 96%.

Group of orthologs #251. Best score 425 bits
Score difference with first non-orthologous sequence - P.jiroveci:425 S.scrofa:425

L0PGU0              	100.00%		F1RIP4              	100.00%
Bootstrap support for L0PGU0 as seed ortholog is 100%.
Bootstrap support for F1RIP4 as seed ortholog is 100%.

Group of orthologs #252. Best score 425 bits
Score difference with first non-orthologous sequence - P.jiroveci:280 S.scrofa:272

L0PC98              	100.00%		F1SSH6              	100.00%
Bootstrap support for L0PC98 as seed ortholog is 100%.
Bootstrap support for F1SSH6 as seed ortholog is 100%.

Group of orthologs #253. Best score 423 bits
Score difference with first non-orthologous sequence - P.jiroveci:423 S.scrofa:423

L0PCQ7              	100.00%		I3LMJ9              	100.00%
Bootstrap support for L0PCQ7 as seed ortholog is 100%.
Bootstrap support for I3LMJ9 as seed ortholog is 100%.

Group of orthologs #254. Best score 422 bits
Score difference with first non-orthologous sequence - P.jiroveci:422 S.scrofa:422

L0PEE4              	100.00%		F1S814              	100.00%
                    	       		F1SJE6              	43.25%
Bootstrap support for L0PEE4 as seed ortholog is 100%.
Bootstrap support for F1S814 as seed ortholog is 100%.

Group of orthologs #255. Best score 422 bits
Score difference with first non-orthologous sequence - P.jiroveci:422 S.scrofa:329

L0P7Z6              	100.00%		F1S586              	100.00%
Bootstrap support for L0P7Z6 as seed ortholog is 100%.
Bootstrap support for F1S586 as seed ortholog is 100%.

Group of orthologs #256. Best score 421 bits
Score difference with first non-orthologous sequence - P.jiroveci:421 S.scrofa:421

L0PAH2              	100.00%		I3L5T8              	100.00%
Bootstrap support for L0PAH2 as seed ortholog is 100%.
Bootstrap support for I3L5T8 as seed ortholog is 100%.

Group of orthologs #257. Best score 420 bits
Score difference with first non-orthologous sequence - P.jiroveci:420 S.scrofa:420

L0PDM0              	100.00%		F1SI76              	100.00%
                    	       		I3LGV1              	26.27%
Bootstrap support for L0PDM0 as seed ortholog is 100%.
Bootstrap support for F1SI76 as seed ortholog is 100%.

Group of orthologs #258. Best score 419 bits
Score difference with first non-orthologous sequence - P.jiroveci:273 S.scrofa:273

L0PE41              	100.00%		F1SK84              	100.00%
Bootstrap support for L0PE41 as seed ortholog is 100%.
Bootstrap support for F1SK84 as seed ortholog is 99%.

Group of orthologs #259. Best score 419 bits
Score difference with first non-orthologous sequence - P.jiroveci:419 S.scrofa:419

L0PG82              	100.00%		F1STJ9              	100.00%
Bootstrap support for L0PG82 as seed ortholog is 100%.
Bootstrap support for F1STJ9 as seed ortholog is 100%.

Group of orthologs #260. Best score 417 bits
Score difference with first non-orthologous sequence - P.jiroveci:229 S.scrofa:417

L0P8X3              	100.00%		F1RIE2              	100.00%
Bootstrap support for L0P8X3 as seed ortholog is 99%.
Bootstrap support for F1RIE2 as seed ortholog is 100%.

Group of orthologs #261. Best score 417 bits
Score difference with first non-orthologous sequence - P.jiroveci:417 S.scrofa:417

L0PBE9              	100.00%		I3L897              	100.00%
Bootstrap support for L0PBE9 as seed ortholog is 100%.
Bootstrap support for I3L897 as seed ortholog is 100%.

Group of orthologs #262. Best score 415 bits
Score difference with first non-orthologous sequence - P.jiroveci:228 S.scrofa:155

L0P6V9              	100.00%		F2Z572              	100.00%
                    	       		F1SG10              	89.72%
Bootstrap support for L0P6V9 as seed ortholog is 100%.
Bootstrap support for F2Z572 as seed ortholog is 100%.

Group of orthologs #263. Best score 415 bits
Score difference with first non-orthologous sequence - P.jiroveci:415 S.scrofa:199

L0PA15              	100.00%		I3LL07              	100.00%
Bootstrap support for L0PA15 as seed ortholog is 100%.
Bootstrap support for I3LL07 as seed ortholog is 100%.

Group of orthologs #264. Best score 413 bits
Score difference with first non-orthologous sequence - P.jiroveci:300 S.scrofa:413

L0P7M4              	100.00%		F1RMZ8              	100.00%
L0PH62              	49.37%		F1SLE5              	66.45%
Bootstrap support for L0P7M4 as seed ortholog is 100%.
Bootstrap support for F1RMZ8 as seed ortholog is 100%.

Group of orthologs #265. Best score 413 bits
Score difference with first non-orthologous sequence - P.jiroveci:413 S.scrofa:413

L0PGA8              	100.00%		O19069              	100.00%
Bootstrap support for L0PGA8 as seed ortholog is 100%.
Bootstrap support for O19069 as seed ortholog is 100%.

Group of orthologs #266. Best score 411 bits
Score difference with first non-orthologous sequence - P.jiroveci:411 S.scrofa:288

L0PDT0              	100.00%		F1SGH5              	100.00%
Bootstrap support for L0PDT0 as seed ortholog is 100%.
Bootstrap support for F1SGH5 as seed ortholog is 100%.

Group of orthologs #267. Best score 411 bits
Score difference with first non-orthologous sequence - P.jiroveci:411 S.scrofa:131

L0PCP3              	100.00%		F1SMB2              	100.00%
Bootstrap support for L0PCP3 as seed ortholog is 100%.
Bootstrap support for F1SMB2 as seed ortholog is 99%.

Group of orthologs #268. Best score 411 bits
Score difference with first non-orthologous sequence - P.jiroveci:202 S.scrofa:151

L0PEM1              	100.00%		I3LQ10              	100.00%
Bootstrap support for L0PEM1 as seed ortholog is 99%.
Bootstrap support for I3LQ10 as seed ortholog is 99%.

Group of orthologs #269. Best score 409 bits
Score difference with first non-orthologous sequence - P.jiroveci:409 S.scrofa:222

L0PGJ5              	100.00%		F1RFM9              	100.00%
Bootstrap support for L0PGJ5 as seed ortholog is 100%.
Bootstrap support for F1RFM9 as seed ortholog is 100%.

Group of orthologs #270. Best score 408 bits
Score difference with first non-orthologous sequence - P.jiroveci:408 S.scrofa:408

L0PBH9              	100.00%		F1SM58              	100.00%
                    	       		I3LMC6              	32.64%
                    	       		F1SJW1              	30.70%
Bootstrap support for L0PBH9 as seed ortholog is 100%.
Bootstrap support for F1SM58 as seed ortholog is 100%.

Group of orthologs #271. Best score 408 bits
Score difference with first non-orthologous sequence - P.jiroveci:16 S.scrofa:83

L0PE81              	100.00%		F1SUK2              	100.00%
                    	       		F1SQW0              	33.28%
Bootstrap support for L0PE81 as seed ortholog is 55%.
Alternative seed ortholog is L0PAN3 (16 bits away from this cluster)
Bootstrap support for F1SUK2 as seed ortholog is 99%.

Group of orthologs #272. Best score 408 bits
Score difference with first non-orthologous sequence - P.jiroveci:408 S.scrofa:269

L0PCN1              	100.00%		F1RPQ3              	100.00%
Bootstrap support for L0PCN1 as seed ortholog is 100%.
Bootstrap support for F1RPQ3 as seed ortholog is 100%.

Group of orthologs #273. Best score 408 bits
Score difference with first non-orthologous sequence - P.jiroveci:408 S.scrofa:408

L0PHJ7              	100.00%		K7N7E7              	100.00%
Bootstrap support for L0PHJ7 as seed ortholog is 100%.
Bootstrap support for K7N7E7 as seed ortholog is 100%.

Group of orthologs #274. Best score 407 bits
Score difference with first non-orthologous sequence - P.jiroveci:407 S.scrofa:407

L0PAN7              	100.00%		F1RKW8              	100.00%
Bootstrap support for L0PAN7 as seed ortholog is 100%.
Bootstrap support for F1RKW8 as seed ortholog is 100%.

Group of orthologs #275. Best score 406 bits
Score difference with first non-orthologous sequence - P.jiroveci:406 S.scrofa:184

L0P702              	100.00%		F1S441              	100.00%
                    	       		I3LQ01              	39.03%
Bootstrap support for L0P702 as seed ortholog is 100%.
Bootstrap support for F1S441 as seed ortholog is 99%.

Group of orthologs #276. Best score 406 bits
Score difference with first non-orthologous sequence - P.jiroveci:406 S.scrofa:406

L0PE52              	100.00%		F1S4I7              	100.00%
L0PIN5              	49.16%		
Bootstrap support for L0PE52 as seed ortholog is 100%.
Bootstrap support for F1S4I7 as seed ortholog is 100%.

Group of orthologs #277. Best score 406 bits
Score difference with first non-orthologous sequence - P.jiroveci:406 S.scrofa:406

L0PIC6              	100.00%		F1SN75              	100.00%
Bootstrap support for L0PIC6 as seed ortholog is 100%.
Bootstrap support for F1SN75 as seed ortholog is 100%.

Group of orthologs #278. Best score 404 bits
Score difference with first non-orthologous sequence - P.jiroveci:404 S.scrofa:404

L0PE98              	100.00%		I3L6F0              	100.00%
                    	       		I3LRR6              	60.42%
                    	       		F1SQL7              	41.39%
Bootstrap support for L0PE98 as seed ortholog is 100%.
Bootstrap support for I3L6F0 as seed ortholog is 100%.

Group of orthologs #279. Best score 403 bits
Score difference with first non-orthologous sequence - P.jiroveci:403 S.scrofa:197

L0PBF6              	100.00%		F1RUD4              	100.00%
                    	       		F1SIX5              	38.71%
Bootstrap support for L0PBF6 as seed ortholog is 100%.
Bootstrap support for F1RUD4 as seed ortholog is 100%.

Group of orthologs #280. Best score 403 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 S.scrofa:7

L0PAY3              	100.00%		F1RW06              	100.00%
                    	       		F1SPH6              	38.86%
Bootstrap support for L0PAY3 as seed ortholog is 99%.
Bootstrap support for F1RW06 as seed ortholog is 59%.
Alternative seed ortholog is C0SW08 (7 bits away from this cluster)

Group of orthologs #281. Best score 403 bits
Score difference with first non-orthologous sequence - P.jiroveci:403 S.scrofa:403

L0PG48              	100.00%		I3L677              	100.00%
Bootstrap support for L0PG48 as seed ortholog is 100%.
Bootstrap support for I3L677 as seed ortholog is 100%.

Group of orthologs #282. Best score 403 bits
Score difference with first non-orthologous sequence - P.jiroveci:403 S.scrofa:109

L0PCL4              	100.00%		I3LHR3              	100.00%
Bootstrap support for L0PCL4 as seed ortholog is 100%.
Bootstrap support for I3LHR3 as seed ortholog is 97%.

Group of orthologs #283. Best score 400 bits
Score difference with first non-orthologous sequence - P.jiroveci:400 S.scrofa:400

L0PBN1              	100.00%		F1SNZ5              	100.00%
Bootstrap support for L0PBN1 as seed ortholog is 100%.
Bootstrap support for F1SNZ5 as seed ortholog is 100%.

Group of orthologs #284. Best score 399 bits
Score difference with first non-orthologous sequence - P.jiroveci:310 S.scrofa:278

L0PA57              	100.00%		I3LDL8              	100.00%
Bootstrap support for L0PA57 as seed ortholog is 100%.
Bootstrap support for I3LDL8 as seed ortholog is 100%.

Group of orthologs #285. Best score 397 bits
Score difference with first non-orthologous sequence - P.jiroveci:397 S.scrofa:304

L0PBI2              	100.00%		F1SD98              	100.00%
                    	       		I3LQ55              	20.06%
Bootstrap support for L0PBI2 as seed ortholog is 100%.
Bootstrap support for F1SD98 as seed ortholog is 100%.

Group of orthologs #286. Best score 396 bits
Score difference with first non-orthologous sequence - P.jiroveci:396 S.scrofa:396

L0PBM9              	100.00%		A5A780              	100.00%
Bootstrap support for L0PBM9 as seed ortholog is 100%.
Bootstrap support for A5A780 as seed ortholog is 100%.

Group of orthologs #287. Best score 396 bits
Score difference with first non-orthologous sequence - P.jiroveci:396 S.scrofa:396

L0P969              	100.00%		F1SMU6              	100.00%
Bootstrap support for L0P969 as seed ortholog is 100%.
Bootstrap support for F1SMU6 as seed ortholog is 100%.

Group of orthologs #288. Best score 393 bits
Score difference with first non-orthologous sequence - P.jiroveci:393 S.scrofa:393

L0PCV8              	100.00%		F1SKJ5              	100.00%
Bootstrap support for L0PCV8 as seed ortholog is 100%.
Bootstrap support for F1SKJ5 as seed ortholog is 100%.

Group of orthologs #289. Best score 393 bits
Score difference with first non-orthologous sequence - P.jiroveci:393 S.scrofa:302

L0PFP2              	100.00%		F1SKQ1              	100.00%
Bootstrap support for L0PFP2 as seed ortholog is 100%.
Bootstrap support for F1SKQ1 as seed ortholog is 100%.

Group of orthologs #290. Best score 391 bits
Score difference with first non-orthologous sequence - P.jiroveci:391 S.scrofa:391

L0P6T8              	100.00%		F1RP39              	100.00%
                    	       		I3LDA8              	33.39%
                    	       		F1RMJ4              	23.48%
                    	       		F1S2H7              	14.32%
Bootstrap support for L0P6T8 as seed ortholog is 100%.
Bootstrap support for F1RP39 as seed ortholog is 100%.

Group of orthologs #291. Best score 391 bits
Score difference with first non-orthologous sequence - P.jiroveci:391 S.scrofa:210

L0PEA7              	100.00%		F1RM25              	100.00%
Bootstrap support for L0PEA7 as seed ortholog is 100%.
Bootstrap support for F1RM25 as seed ortholog is 100%.

Group of orthologs #292. Best score 390 bits
Score difference with first non-orthologous sequence - P.jiroveci:390 S.scrofa:390

L0PI13              	100.00%		P46410              	100.00%
Bootstrap support for L0PI13 as seed ortholog is 100%.
Bootstrap support for P46410 as seed ortholog is 100%.

Group of orthologs #293. Best score 389 bits
Score difference with first non-orthologous sequence - P.jiroveci:243 S.scrofa:281

L0PBY2              	100.00%		I3LHS1              	100.00%
                    	       		I3LBK3              	87.40%
                    	       		F1SKM0              	27.36%
Bootstrap support for L0PBY2 as seed ortholog is 100%.
Bootstrap support for I3LHS1 as seed ortholog is 100%.

Group of orthologs #294. Best score 388 bits
Score difference with first non-orthologous sequence - P.jiroveci:388 S.scrofa:388

L0PAM5              	100.00%		F1RTI8              	100.00%
                    	       		F1SV41              	26.38%
Bootstrap support for L0PAM5 as seed ortholog is 100%.
Bootstrap support for F1RTI8 as seed ortholog is 100%.

Group of orthologs #295. Best score 388 bits
Score difference with first non-orthologous sequence - P.jiroveci:388 S.scrofa:388

L0P8A6              	100.00%		I3LHB2              	100.00%
                    	       		I3LSJ9              	53.94%
Bootstrap support for L0P8A6 as seed ortholog is 100%.
Bootstrap support for I3LHB2 as seed ortholog is 100%.

Group of orthologs #296. Best score 388 bits
Score difference with first non-orthologous sequence - P.jiroveci:388 S.scrofa:159

L0P9R8              	100.00%		P04175              	100.00%
                    	       		I3LD63              	35.02%
Bootstrap support for L0P9R8 as seed ortholog is 100%.
Bootstrap support for P04175 as seed ortholog is 99%.

Group of orthologs #297. Best score 388 bits
Score difference with first non-orthologous sequence - P.jiroveci:388 S.scrofa:388

L0PEY9              	100.00%		F1RH91              	100.00%
Bootstrap support for L0PEY9 as seed ortholog is 100%.
Bootstrap support for F1RH91 as seed ortholog is 100%.

Group of orthologs #298. Best score 388 bits
Score difference with first non-orthologous sequence - P.jiroveci:388 S.scrofa:311

L0PCT5              	100.00%		F1SCV1              	100.00%
Bootstrap support for L0PCT5 as seed ortholog is 100%.
Bootstrap support for F1SCV1 as seed ortholog is 100%.

Group of orthologs #299. Best score 388 bits
Score difference with first non-orthologous sequence - P.jiroveci:388 S.scrofa:183

L0P6U6              	100.00%		F1SSL4              	100.00%
Bootstrap support for L0P6U6 as seed ortholog is 100%.
Bootstrap support for F1SSL4 as seed ortholog is 99%.

Group of orthologs #300. Best score 387 bits
Score difference with first non-orthologous sequence - P.jiroveci:387 S.scrofa:135

L0PGN1              	100.00%		F1S520              	100.00%
Bootstrap support for L0PGN1 as seed ortholog is 100%.
Bootstrap support for F1S520 as seed ortholog is 99%.

Group of orthologs #301. Best score 387 bits
Score difference with first non-orthologous sequence - P.jiroveci:387 S.scrofa:387

L0P8Z3              	100.00%		I3LDB7              	100.00%
Bootstrap support for L0P8Z3 as seed ortholog is 100%.
Bootstrap support for I3LDB7 as seed ortholog is 100%.

Group of orthologs #302. Best score 386 bits
Score difference with first non-orthologous sequence - P.jiroveci:386 S.scrofa:386

L0P6U2              	100.00%		F1S2J6              	100.00%
Bootstrap support for L0P6U2 as seed ortholog is 100%.
Bootstrap support for F1S2J6 as seed ortholog is 100%.

Group of orthologs #303. Best score 386 bits
Score difference with first non-orthologous sequence - P.jiroveci:386 S.scrofa:386

L0PID0              	100.00%		F2Z567              	100.00%
Bootstrap support for L0PID0 as seed ortholog is 100%.
Bootstrap support for F2Z567 as seed ortholog is 100%.

Group of orthologs #304. Best score 386 bits
Score difference with first non-orthologous sequence - P.jiroveci:386 S.scrofa:386

L0PGC4              	100.00%		I3L616              	100.00%
Bootstrap support for L0PGC4 as seed ortholog is 100%.
Bootstrap support for I3L616 as seed ortholog is 100%.

Group of orthologs #305. Best score 385 bits
Score difference with first non-orthologous sequence - P.jiroveci:385 S.scrofa:326

L0PFD9              	100.00%		F1S3R5              	100.00%
Bootstrap support for L0PFD9 as seed ortholog is 100%.
Bootstrap support for F1S3R5 as seed ortholog is 100%.

Group of orthologs #306. Best score 385 bits
Score difference with first non-orthologous sequence - P.jiroveci:385 S.scrofa:385

L0P7S7              	100.00%		F1SQG5              	100.00%
Bootstrap support for L0P7S7 as seed ortholog is 100%.
Bootstrap support for F1SQG5 as seed ortholog is 100%.

Group of orthologs #307. Best score 385 bits
Score difference with first non-orthologous sequence - P.jiroveci:187 S.scrofa:191

L0PC99              	100.00%		F1SQH6              	100.00%
Bootstrap support for L0PC99 as seed ortholog is 99%.
Bootstrap support for F1SQH6 as seed ortholog is 99%.

Group of orthologs #308. Best score 384 bits
Score difference with first non-orthologous sequence - P.jiroveci:384 S.scrofa:384

L0PA23              	100.00%		Q19QT7              	100.00%
Bootstrap support for L0PA23 as seed ortholog is 100%.
Bootstrap support for Q19QT7 as seed ortholog is 100%.

Group of orthologs #309. Best score 382 bits
Score difference with first non-orthologous sequence - P.jiroveci:182 S.scrofa:339

L0PBH6              	100.00%		F1RUL2              	100.00%
                    	       		F1RTR6              	39.38%
                    	       		B8XSK3              	39.11%
                    	       		F1SKM3              	38.71%
Bootstrap support for L0PBH6 as seed ortholog is 100%.
Bootstrap support for F1RUL2 as seed ortholog is 100%.

Group of orthologs #310. Best score 382 bits
Score difference with first non-orthologous sequence - P.jiroveci:288 S.scrofa:252

L0P7Z7              	100.00%		Q9GL51              	100.00%
Bootstrap support for L0P7Z7 as seed ortholog is 100%.
Bootstrap support for Q9GL51 as seed ortholog is 100%.

Group of orthologs #311. Best score 381 bits
Score difference with first non-orthologous sequence - P.jiroveci:381 S.scrofa:281

L0PB23              	100.00%		F1RN46              	100.00%
Bootstrap support for L0PB23 as seed ortholog is 100%.
Bootstrap support for F1RN46 as seed ortholog is 100%.

Group of orthologs #312. Best score 380 bits
Score difference with first non-orthologous sequence - P.jiroveci:380 S.scrofa:380

L0PCR5              	100.00%		I3LTH3              	100.00%
L0P9C2              	56.21%		F1RR06              	69.21%
Bootstrap support for L0PCR5 as seed ortholog is 100%.
Bootstrap support for I3LTH3 as seed ortholog is 100%.

Group of orthologs #313. Best score 379 bits
Score difference with first non-orthologous sequence - P.jiroveci:379 S.scrofa:241

L0PEI4              	100.00%		F1STY3              	100.00%
Bootstrap support for L0PEI4 as seed ortholog is 100%.
Bootstrap support for F1STY3 as seed ortholog is 100%.

Group of orthologs #314. Best score 378 bits
Score difference with first non-orthologous sequence - P.jiroveci:378 S.scrofa:378

L0PAH9              	100.00%		F1RL00              	100.00%
L0PAZ7              	31.73%		
Bootstrap support for L0PAH9 as seed ortholog is 100%.
Bootstrap support for F1RL00 as seed ortholog is 100%.

Group of orthologs #315. Best score 378 bits
Score difference with first non-orthologous sequence - P.jiroveci:378 S.scrofa:246

L0PHI3              	100.00%		F1SFG2              	100.00%
Bootstrap support for L0PHI3 as seed ortholog is 100%.
Bootstrap support for F1SFG2 as seed ortholog is 100%.

Group of orthologs #316. Best score 377 bits
Score difference with first non-orthologous sequence - P.jiroveci:377 S.scrofa:377

L0PDW0              	100.00%		F1RHH2              	100.00%
                    	       		I3LA23              	85.19%
Bootstrap support for L0PDW0 as seed ortholog is 100%.
Bootstrap support for F1RHH2 as seed ortholog is 100%.

Group of orthologs #317. Best score 376 bits
Score difference with first non-orthologous sequence - P.jiroveci:229 S.scrofa:99

L0PCW4              	100.00%		F1SIN8              	100.00%
                    	       		F1RP42              	19.11%
Bootstrap support for L0PCW4 as seed ortholog is 100%.
Bootstrap support for F1SIN8 as seed ortholog is 99%.

Group of orthologs #318. Best score 376 bits
Score difference with first non-orthologous sequence - P.jiroveci:376 S.scrofa:376

L0PFQ8              	100.00%		I3L5T3              	100.00%
                    	       		F1RR91              	32.75%
Bootstrap support for L0PFQ8 as seed ortholog is 100%.
Bootstrap support for I3L5T3 as seed ortholog is 100%.

Group of orthologs #319. Best score 375 bits
Score difference with first non-orthologous sequence - P.jiroveci:375 S.scrofa:257

L0PH29              	100.00%		F1RKN8              	100.00%
                    	       		F1SDH5              	48.52%
                    	       		F1S0A1              	37.52%
Bootstrap support for L0PH29 as seed ortholog is 100%.
Bootstrap support for F1RKN8 as seed ortholog is 100%.

Group of orthologs #320. Best score 375 bits
Score difference with first non-orthologous sequence - P.jiroveci:375 S.scrofa:51

L0PFY3              	100.00%		F1RRK4              	100.00%
Bootstrap support for L0PFY3 as seed ortholog is 100%.
Bootstrap support for F1RRK4 as seed ortholog is 84%.

Group of orthologs #321. Best score 375 bits
Score difference with first non-orthologous sequence - P.jiroveci:375 S.scrofa:375

L0PDI1              	100.00%		F1RWX5              	100.00%
Bootstrap support for L0PDI1 as seed ortholog is 100%.
Bootstrap support for F1RWX5 as seed ortholog is 100%.

Group of orthologs #322. Best score 375 bits
Score difference with first non-orthologous sequence - P.jiroveci:375 S.scrofa:375

L0P8G8              	100.00%		I3LLW6              	100.00%
Bootstrap support for L0P8G8 as seed ortholog is 100%.
Bootstrap support for I3LLW6 as seed ortholog is 100%.

Group of orthologs #323. Best score 373 bits
Score difference with first non-orthologous sequence - P.jiroveci:373 S.scrofa:295

L0PG01              	100.00%		F1RSL5              	100.00%
L0P7J0              	81.80%		
Bootstrap support for L0PG01 as seed ortholog is 100%.
Bootstrap support for F1RSL5 as seed ortholog is 100%.

Group of orthologs #324. Best score 373 bits
Score difference with first non-orthologous sequence - P.jiroveci:373 S.scrofa:262

L0P7P4              	100.00%		F1RSR4              	100.00%
Bootstrap support for L0P7P4 as seed ortholog is 100%.
Bootstrap support for F1RSR4 as seed ortholog is 100%.

Group of orthologs #325. Best score 373 bits
Score difference with first non-orthologous sequence - P.jiroveci:373 S.scrofa:373

L0PGF5              	100.00%		F2Z5T0              	100.00%
Bootstrap support for L0PGF5 as seed ortholog is 100%.
Bootstrap support for F2Z5T0 as seed ortholog is 100%.

Group of orthologs #326. Best score 371 bits
Score difference with first non-orthologous sequence - P.jiroveci:371 S.scrofa:114

L0P7X9              	100.00%		P22411              	100.00%
L0PBE2              	80.74%		F1RPQ0              	39.00%
Bootstrap support for L0P7X9 as seed ortholog is 100%.
Bootstrap support for P22411 as seed ortholog is 98%.

Group of orthologs #327. Best score 369 bits
Score difference with first non-orthologous sequence - P.jiroveci:192 S.scrofa:369

L0P8U1              	100.00%		F1S0W3              	100.00%
Bootstrap support for L0P8U1 as seed ortholog is 99%.
Bootstrap support for F1S0W3 as seed ortholog is 100%.

Group of orthologs #328. Best score 369 bits
Score difference with first non-orthologous sequence - P.jiroveci:369 S.scrofa:369

L0PA13              	100.00%		F1SR01              	100.00%
Bootstrap support for L0PA13 as seed ortholog is 100%.
Bootstrap support for F1SR01 as seed ortholog is 100%.

Group of orthologs #329. Best score 368 bits
Score difference with first non-orthologous sequence - P.jiroveci:368 S.scrofa:368

L0PBA9              	100.00%		F1RP04              	100.00%
                    	       		F1RSP5              	48.77%
Bootstrap support for L0PBA9 as seed ortholog is 100%.
Bootstrap support for F1RP04 as seed ortholog is 100%.

Group of orthologs #330. Best score 368 bits
Score difference with first non-orthologous sequence - P.jiroveci:368 S.scrofa:309

L0PEX9              	100.00%		F1SV26              	100.00%
                    	       		F1S0C8              	52.98%
Bootstrap support for L0PEX9 as seed ortholog is 100%.
Bootstrap support for F1SV26 as seed ortholog is 100%.

Group of orthologs #331. Best score 368 bits
Score difference with first non-orthologous sequence - P.jiroveci:159 S.scrofa:87

L0PAY5              	100.00%		F1S7D9              	100.00%
Bootstrap support for L0PAY5 as seed ortholog is 99%.
Bootstrap support for F1S7D9 as seed ortholog is 98%.

Group of orthologs #332. Best score 368 bits
Score difference with first non-orthologous sequence - P.jiroveci:368 S.scrofa:368

L0P9U8              	100.00%		F1SBU5              	100.00%
Bootstrap support for L0P9U8 as seed ortholog is 100%.
Bootstrap support for F1SBU5 as seed ortholog is 100%.

Group of orthologs #333. Best score 368 bits
Score difference with first non-orthologous sequence - P.jiroveci:368 S.scrofa:368

L0PCB2              	100.00%		F1SGD9              	100.00%
Bootstrap support for L0PCB2 as seed ortholog is 100%.
Bootstrap support for F1SGD9 as seed ortholog is 100%.

Group of orthologs #334. Best score 367 bits
Score difference with first non-orthologous sequence - P.jiroveci:195 S.scrofa:291

L0P9D3              	100.00%		I3LF05              	100.00%
L0P7B2              	50.76%		
Bootstrap support for L0P9D3 as seed ortholog is 99%.
Bootstrap support for I3LF05 as seed ortholog is 100%.

Group of orthologs #335. Best score 366 bits
Score difference with first non-orthologous sequence - P.jiroveci:366 S.scrofa:297

L0PDV0              	100.00%		F1SDG5              	100.00%
Bootstrap support for L0PDV0 as seed ortholog is 100%.
Bootstrap support for F1SDG5 as seed ortholog is 100%.

Group of orthologs #336. Best score 366 bits
Score difference with first non-orthologous sequence - P.jiroveci:366 S.scrofa:366

L0PC90              	100.00%		F1SSZ9              	100.00%
Bootstrap support for L0PC90 as seed ortholog is 100%.
Bootstrap support for F1SSZ9 as seed ortholog is 100%.

Group of orthologs #337. Best score 364 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 S.scrofa:107

L0PBU4              	100.00%		I3LUB8              	100.00%
                    	       		F1RWC5              	68.38%
                    	       		F1SKH3              	66.76%
                    	       		F1SL59              	17.06%
Bootstrap support for L0PBU4 as seed ortholog is 99%.
Bootstrap support for I3LUB8 as seed ortholog is 100%.

Group of orthologs #338. Best score 364 bits
Score difference with first non-orthologous sequence - P.jiroveci:185 S.scrofa:364

L0PAU1              	100.00%		F1S5Z3              	100.00%
Bootstrap support for L0PAU1 as seed ortholog is 99%.
Bootstrap support for F1S5Z3 as seed ortholog is 100%.

Group of orthologs #339. Best score 363 bits
Score difference with first non-orthologous sequence - P.jiroveci:363 S.scrofa:237

L0PG24              	100.00%		F1S8S6              	100.00%
Bootstrap support for L0PG24 as seed ortholog is 100%.
Bootstrap support for F1S8S6 as seed ortholog is 100%.

Group of orthologs #340. Best score 363 bits
Score difference with first non-orthologous sequence - P.jiroveci:363 S.scrofa:363

L0PF21              	100.00%		P00503              	100.00%
Bootstrap support for L0PF21 as seed ortholog is 100%.
Bootstrap support for P00503 as seed ortholog is 100%.

Group of orthologs #341. Best score 362 bits
Score difference with first non-orthologous sequence - P.jiroveci:362 S.scrofa:293

L0PIR9              	100.00%		F1S8H4              	100.00%
Bootstrap support for L0PIR9 as seed ortholog is 100%.
Bootstrap support for F1S8H4 as seed ortholog is 100%.

Group of orthologs #342. Best score 361 bits
Score difference with first non-orthologous sequence - P.jiroveci:361 S.scrofa:361

L0PDQ3              	100.00%		F1S5Q4              	100.00%
                    	       		F1RYS2              	63.57%
Bootstrap support for L0PDQ3 as seed ortholog is 100%.
Bootstrap support for F1S5Q4 as seed ortholog is 100%.

Group of orthologs #343. Best score 361 bits
Score difference with first non-orthologous sequence - P.jiroveci:361 S.scrofa:361

L0PCW8              	100.00%		F1S0G2              	100.00%
Bootstrap support for L0PCW8 as seed ortholog is 100%.
Bootstrap support for F1S0G2 as seed ortholog is 100%.

Group of orthologs #344. Best score 361 bits
Score difference with first non-orthologous sequence - P.jiroveci:218 S.scrofa:88

L0PFK8              	100.00%		I3LPD2              	100.00%
Bootstrap support for L0PFK8 as seed ortholog is 100%.
Bootstrap support for I3LPD2 as seed ortholog is 99%.

Group of orthologs #345. Best score 360 bits
Score difference with first non-orthologous sequence - P.jiroveci:110 S.scrofa:360

L0PD82              	100.00%		P0C5I2              	100.00%
Bootstrap support for L0PD82 as seed ortholog is 99%.
Bootstrap support for P0C5I2 as seed ortholog is 100%.

Group of orthologs #346. Best score 358 bits
Score difference with first non-orthologous sequence - P.jiroveci:358 S.scrofa:236

L0PD17              	100.00%		F1RVS3              	100.00%
                    	       		F1RXP3              	35.17%
                    	       		F1RYI5              	21.91%
Bootstrap support for L0PD17 as seed ortholog is 100%.
Bootstrap support for F1RVS3 as seed ortholog is 100%.

Group of orthologs #347. Best score 358 bits
Score difference with first non-orthologous sequence - P.jiroveci:208 S.scrofa:37

L0P9Z0              	100.00%		F1RL02              	100.00%
                    	       		I3LVK2              	27.80%
Bootstrap support for L0P9Z0 as seed ortholog is 100%.
Bootstrap support for F1RL02 as seed ortholog is 85%.

Group of orthologs #348. Best score 358 bits
Score difference with first non-orthologous sequence - P.jiroveci:358 S.scrofa:257

L0PDF2              	100.00%		F1SIH5              	100.00%
Bootstrap support for L0PDF2 as seed ortholog is 100%.
Bootstrap support for F1SIH5 as seed ortholog is 100%.

Group of orthologs #349. Best score 357 bits
Score difference with first non-orthologous sequence - P.jiroveci:137 S.scrofa:108

L0PF10              	100.00%		C9K505              	100.00%
Bootstrap support for L0PF10 as seed ortholog is 100%.
Bootstrap support for C9K505 as seed ortholog is 99%.

Group of orthologs #350. Best score 356 bits
Score difference with first non-orthologous sequence - P.jiroveci:356 S.scrofa:356

L0PBC5              	100.00%		F2Z5H6              	100.00%
                    	       		F1RXD2              	41.01%
Bootstrap support for L0PBC5 as seed ortholog is 100%.
Bootstrap support for F2Z5H6 as seed ortholog is 100%.

Group of orthologs #351. Best score 356 bits
Score difference with first non-orthologous sequence - P.jiroveci:356 S.scrofa:356

L0PFP6              	100.00%		I3LGX0              	100.00%
Bootstrap support for L0PFP6 as seed ortholog is 100%.
Bootstrap support for I3LGX0 as seed ortholog is 100%.

Group of orthologs #352. Best score 354 bits
Score difference with first non-orthologous sequence - P.jiroveci:354 S.scrofa:354

L0PBX2              	100.00%		F1SP81              	100.00%
Bootstrap support for L0PBX2 as seed ortholog is 100%.
Bootstrap support for F1SP81 as seed ortholog is 100%.

Group of orthologs #353. Best score 353 bits
Score difference with first non-orthologous sequence - P.jiroveci:353 S.scrofa:353

L0PES3              	100.00%		F1SF51              	100.00%
Bootstrap support for L0PES3 as seed ortholog is 100%.
Bootstrap support for F1SF51 as seed ortholog is 100%.

Group of orthologs #354. Best score 353 bits
Score difference with first non-orthologous sequence - P.jiroveci:353 S.scrofa:262

L0PI36              	100.00%		F1SHF4              	100.00%
Bootstrap support for L0PI36 as seed ortholog is 100%.
Bootstrap support for F1SHF4 as seed ortholog is 100%.

Group of orthologs #355. Best score 352 bits
Score difference with first non-orthologous sequence - P.jiroveci:352 S.scrofa:183

L0P9K4              	100.00%		I3LJB6              	100.00%
                    	       		F1S0U8              	61.72%
Bootstrap support for L0P9K4 as seed ortholog is 100%.
Bootstrap support for I3LJB6 as seed ortholog is 99%.

Group of orthologs #356. Best score 352 bits
Score difference with first non-orthologous sequence - P.jiroveci:352 S.scrofa:352

L0PBA8              	100.00%		F1RPB7              	100.00%
Bootstrap support for L0PBA8 as seed ortholog is 100%.
Bootstrap support for F1RPB7 as seed ortholog is 100%.

Group of orthologs #357. Best score 352 bits
Score difference with first non-orthologous sequence - P.jiroveci:352 S.scrofa:352

L0PAC7              	100.00%		F1SJT9              	100.00%
Bootstrap support for L0PAC7 as seed ortholog is 100%.
Bootstrap support for F1SJT9 as seed ortholog is 100%.

Group of orthologs #358. Best score 351 bits
Score difference with first non-orthologous sequence - P.jiroveci:351 S.scrofa:187

L0PB24              	100.00%		F1SKY6              	100.00%
                    	       		F1RHU6              	55.32%
Bootstrap support for L0PB24 as seed ortholog is 100%.
Bootstrap support for F1SKY6 as seed ortholog is 100%.

Group of orthologs #359. Best score 351 bits
Score difference with first non-orthologous sequence - P.jiroveci:351 S.scrofa:259

L0PBQ9              	100.00%		F1SEE2              	100.00%
Bootstrap support for L0PBQ9 as seed ortholog is 100%.
Bootstrap support for F1SEE2 as seed ortholog is 100%.

Group of orthologs #360. Best score 350 bits
Score difference with first non-orthologous sequence - P.jiroveci:350 S.scrofa:281

L0PBQ1              	100.00%		F1RSM2              	100.00%
Bootstrap support for L0PBQ1 as seed ortholog is 100%.
Bootstrap support for F1RSM2 as seed ortholog is 100%.

Group of orthologs #361. Best score 350 bits
Score difference with first non-orthologous sequence - P.jiroveci:88 S.scrofa:70

L0PBP2              	100.00%		I3LM88              	100.00%
Bootstrap support for L0PBP2 as seed ortholog is 93%.
Bootstrap support for I3LM88 as seed ortholog is 85%.

Group of orthologs #362. Best score 350 bits
Score difference with first non-orthologous sequence - P.jiroveci:291 S.scrofa:350

L0PB98              	100.00%		I3LND5              	100.00%
Bootstrap support for L0PB98 as seed ortholog is 100%.
Bootstrap support for I3LND5 as seed ortholog is 100%.

Group of orthologs #363. Best score 347 bits
Score difference with first non-orthologous sequence - P.jiroveci:347 S.scrofa:347

L0PBN2              	100.00%		F1RNT7              	100.00%
Bootstrap support for L0PBN2 as seed ortholog is 100%.
Bootstrap support for F1RNT7 as seed ortholog is 100%.

Group of orthologs #364. Best score 347 bits
Score difference with first non-orthologous sequence - P.jiroveci:347 S.scrofa:347

L0PFC2              	100.00%		I3LBB2              	100.00%
Bootstrap support for L0PFC2 as seed ortholog is 100%.
Bootstrap support for I3LBB2 as seed ortholog is 100%.

Group of orthologs #365. Best score 346 bits
Score difference with first non-orthologous sequence - P.jiroveci:346 S.scrofa:346

L0PF74              	100.00%		F1RSU6              	100.00%
Bootstrap support for L0PF74 as seed ortholog is 100%.
Bootstrap support for F1RSU6 as seed ortholog is 100%.

Group of orthologs #366. Best score 345 bits
Score difference with first non-orthologous sequence - P.jiroveci:345 S.scrofa:345

L0PD02              	100.00%		Q007T0              	100.00%
Bootstrap support for L0PD02 as seed ortholog is 100%.
Bootstrap support for Q007T0 as seed ortholog is 100%.

Group of orthologs #367. Best score 344 bits
Score difference with first non-orthologous sequence - P.jiroveci:344 S.scrofa:39

L0P9Y8              	100.00%		F1SAY6              	100.00%
                    	       		O02773              	47.24%
Bootstrap support for L0P9Y8 as seed ortholog is 100%.
Bootstrap support for F1SAY6 as seed ortholog is 83%.

Group of orthologs #368. Best score 343 bits
Score difference with first non-orthologous sequence - P.jiroveci:343 S.scrofa:343

L0PD99              	100.00%		F1SK95              	100.00%
Bootstrap support for L0PD99 as seed ortholog is 100%.
Bootstrap support for F1SK95 as seed ortholog is 100%.

Group of orthologs #369. Best score 342 bits
Score difference with first non-orthologous sequence - P.jiroveci:342 S.scrofa:342

L0PA00              	100.00%		F1RKS3              	100.00%
Bootstrap support for L0PA00 as seed ortholog is 100%.
Bootstrap support for F1RKS3 as seed ortholog is 100%.

Group of orthologs #370. Best score 342 bits
Score difference with first non-orthologous sequence - P.jiroveci:342 S.scrofa:342

L0P8T4              	100.00%		F1RV70              	100.00%
Bootstrap support for L0P8T4 as seed ortholog is 100%.
Bootstrap support for F1RV70 as seed ortholog is 100%.

Group of orthologs #371. Best score 342 bits
Score difference with first non-orthologous sequence - P.jiroveci:342 S.scrofa:342

L0P9B4              	100.00%		F1SQJ7              	100.00%
Bootstrap support for L0P9B4 as seed ortholog is 100%.
Bootstrap support for F1SQJ7 as seed ortholog is 100%.

Group of orthologs #372. Best score 342 bits
Score difference with first non-orthologous sequence - P.jiroveci:342 S.scrofa:342

L0PF30              	100.00%		F1SUG1              	100.00%
Bootstrap support for L0PF30 as seed ortholog is 100%.
Bootstrap support for F1SUG1 as seed ortholog is 100%.

Group of orthologs #373. Best score 341 bits
Score difference with first non-orthologous sequence - P.jiroveci:341 S.scrofa:150

L0PE19              	100.00%		I3LHX6              	100.00%
Bootstrap support for L0PE19 as seed ortholog is 100%.
Bootstrap support for I3LHX6 as seed ortholog is 100%.

Group of orthologs #374. Best score 341 bits
Score difference with first non-orthologous sequence - P.jiroveci:172 S.scrofa:51

L0PCJ5              	100.00%		Q5H7C0              	100.00%
Bootstrap support for L0PCJ5 as seed ortholog is 99%.
Bootstrap support for Q5H7C0 as seed ortholog is 86%.

Group of orthologs #375. Best score 339 bits
Score difference with first non-orthologous sequence - P.jiroveci:339 S.scrofa:256

L0PEF5              	100.00%		F1RFQ7              	100.00%
Bootstrap support for L0PEF5 as seed ortholog is 100%.
Bootstrap support for F1RFQ7 as seed ortholog is 100%.

Group of orthologs #376. Best score 339 bits
Score difference with first non-orthologous sequence - P.jiroveci:339 S.scrofa:235

L0PF71              	100.00%		F1SK46              	100.00%
Bootstrap support for L0PF71 as seed ortholog is 100%.
Bootstrap support for F1SK46 as seed ortholog is 100%.

Group of orthologs #377. Best score 337 bits
Score difference with first non-orthologous sequence - P.jiroveci:295 S.scrofa:337

L0PC30              	100.00%		F1STW6              	100.00%
Bootstrap support for L0PC30 as seed ortholog is 100%.
Bootstrap support for F1STW6 as seed ortholog is 100%.

Group of orthologs #378. Best score 335 bits
Score difference with first non-orthologous sequence - P.jiroveci:335 S.scrofa:273

L0PFY2              	100.00%		I3LFW3              	100.00%
Bootstrap support for L0PFY2 as seed ortholog is 100%.
Bootstrap support for I3LFW3 as seed ortholog is 100%.

Group of orthologs #379. Best score 334 bits
Score difference with first non-orthologous sequence - P.jiroveci:334 S.scrofa:334

L0P912              	100.00%		F1SE91              	100.00%
L0P908              	89.41%		
Bootstrap support for L0P912 as seed ortholog is 100%.
Bootstrap support for F1SE91 as seed ortholog is 100%.

Group of orthologs #380. Best score 334 bits
Score difference with first non-orthologous sequence - P.jiroveci:334 S.scrofa:334

L0PB54              	100.00%		I3LAQ3              	100.00%
                    	       		F1RW13              	55.52%
Bootstrap support for L0PB54 as seed ortholog is 100%.
Bootstrap support for I3LAQ3 as seed ortholog is 100%.

Group of orthologs #381. Best score 334 bits
Score difference with first non-orthologous sequence - P.jiroveci:334 S.scrofa:334

L0P8R5              	100.00%		F1S1G0              	100.00%
Bootstrap support for L0P8R5 as seed ortholog is 100%.
Bootstrap support for F1S1G0 as seed ortholog is 100%.

Group of orthologs #382. Best score 334 bits
Score difference with first non-orthologous sequence - P.jiroveci:334 S.scrofa:334

L0PF46              	100.00%		F1SV40              	100.00%
Bootstrap support for L0PF46 as seed ortholog is 100%.
Bootstrap support for F1SV40 as seed ortholog is 100%.

Group of orthologs #383. Best score 334 bits
Score difference with first non-orthologous sequence - P.jiroveci:334 S.scrofa:334

L0PED5              	100.00%		I3LGL1              	100.00%
Bootstrap support for L0PED5 as seed ortholog is 100%.
Bootstrap support for I3LGL1 as seed ortholog is 100%.

Group of orthologs #384. Best score 333 bits
Score difference with first non-orthologous sequence - P.jiroveci:333 S.scrofa:333

L0PAL9              	100.00%		F1SD90              	100.00%
L0PBY7              	40.93%		F1SQL1              	58.47%
Bootstrap support for L0PAL9 as seed ortholog is 100%.
Bootstrap support for F1SD90 as seed ortholog is 100%.

Group of orthologs #385. Best score 332 bits
Score difference with first non-orthologous sequence - P.jiroveci:214 S.scrofa:64

L0P942              	100.00%		I3LII4              	100.00%
L0P7J6              	60.29%		F1SLJ2              	10.18%
                    	       		F1S348              	7.00%
Bootstrap support for L0P942 as seed ortholog is 99%.
Bootstrap support for I3LII4 as seed ortholog is 98%.

Group of orthologs #386. Best score 332 bits
Score difference with first non-orthologous sequence - P.jiroveci:332 S.scrofa:69

L0PBM5              	100.00%		I3LJL9              	100.00%
                    	       		I3LK82              	62.63%
                    	       		F1SET5              	33.77%
Bootstrap support for L0PBM5 as seed ortholog is 100%.
Bootstrap support for I3LJL9 as seed ortholog is 89%.

Group of orthologs #387. Best score 332 bits
Score difference with first non-orthologous sequence - P.jiroveci:332 S.scrofa:175

L0PC17              	100.00%		Q9N0F1              	100.00%
L0PD22              	50.74%		
Bootstrap support for L0PC17 as seed ortholog is 100%.
Bootstrap support for Q9N0F1 as seed ortholog is 100%.

Group of orthologs #388. Best score 331 bits
Score difference with first non-orthologous sequence - P.jiroveci:162 S.scrofa:229

L0PB21              	100.00%		Q29024              	100.00%
                    	       		F1SCH3              	88.29%
Bootstrap support for L0PB21 as seed ortholog is 100%.
Bootstrap support for Q29024 as seed ortholog is 100%.

Group of orthologs #389. Best score 330 bits
Score difference with first non-orthologous sequence - P.jiroveci:330 S.scrofa:45

L0PA09              	100.00%		I3LP02              	100.00%
Bootstrap support for L0PA09 as seed ortholog is 100%.
Bootstrap support for I3LP02 as seed ortholog is 89%.

Group of orthologs #390. Best score 329 bits
Score difference with first non-orthologous sequence - P.jiroveci:329 S.scrofa:112

L0P891              	100.00%		F1RKG3              	100.00%
Bootstrap support for L0P891 as seed ortholog is 100%.
Bootstrap support for F1RKG3 as seed ortholog is 99%.

Group of orthologs #391. Best score 329 bits
Score difference with first non-orthologous sequence - P.jiroveci:329 S.scrofa:329

L0P7V2              	100.00%		I3L7C2              	100.00%
Bootstrap support for L0P7V2 as seed ortholog is 100%.
Bootstrap support for I3L7C2 as seed ortholog is 100%.

Group of orthologs #392. Best score 329 bits
Score difference with first non-orthologous sequence - P.jiroveci:329 S.scrofa:329

L0PFI2              	100.00%		F2Z5J8              	100.00%
Bootstrap support for L0PFI2 as seed ortholog is 100%.
Bootstrap support for F2Z5J8 as seed ortholog is 100%.

Group of orthologs #393. Best score 328 bits
Score difference with first non-orthologous sequence - P.jiroveci:328 S.scrofa:328

L0P7N5              	100.00%		F1RKW4              	100.00%
                    	       		Q864R5              	33.01%
Bootstrap support for L0P7N5 as seed ortholog is 100%.
Bootstrap support for F1RKW4 as seed ortholog is 100%.

Group of orthologs #394. Best score 328 bits
Score difference with first non-orthologous sequence - P.jiroveci:328 S.scrofa:328

L0PBZ7              	100.00%		I3LE25              	100.00%
Bootstrap support for L0PBZ7 as seed ortholog is 100%.
Bootstrap support for I3LE25 as seed ortholog is 100%.

Group of orthologs #395. Best score 327 bits
Score difference with first non-orthologous sequence - P.jiroveci:327 S.scrofa:327

L0PD18              	100.00%		F1RW76              	100.00%
Bootstrap support for L0PD18 as seed ortholog is 100%.
Bootstrap support for F1RW76 as seed ortholog is 100%.

Group of orthologs #396. Best score 327 bits
Score difference with first non-orthologous sequence - P.jiroveci:327 S.scrofa:327

L0P8J2              	100.00%		F2Z5N9              	100.00%
Bootstrap support for L0P8J2 as seed ortholog is 100%.
Bootstrap support for F2Z5N9 as seed ortholog is 100%.

Group of orthologs #397. Best score 327 bits
Score difference with first non-orthologous sequence - P.jiroveci:327 S.scrofa:327

L0PAF9              	100.00%		I3LLA8              	100.00%
Bootstrap support for L0PAF9 as seed ortholog is 100%.
Bootstrap support for I3LLA8 as seed ortholog is 100%.

Group of orthologs #398. Best score 327 bits
Score difference with first non-orthologous sequence - P.jiroveci:277 S.scrofa:184

L0PAL8              	100.00%		I3LNG8              	100.00%
Bootstrap support for L0PAL8 as seed ortholog is 100%.
Bootstrap support for I3LNG8 as seed ortholog is 99%.

Group of orthologs #399. Best score 326 bits
Score difference with first non-orthologous sequence - P.jiroveci:41 S.scrofa:17

L0PCQ8              	100.00%		F1S297              	100.00%
Bootstrap support for L0PCQ8 as seed ortholog is 88%.
Bootstrap support for F1S297 as seed ortholog is 68%.
Alternative seed ortholog is I3L8X0 (17 bits away from this cluster)

Group of orthologs #400. Best score 324 bits
Score difference with first non-orthologous sequence - P.jiroveci:324 S.scrofa:324

L0P8N3              	100.00%		F1RXA7              	100.00%
                    	       		I3LL55              	71.72%
Bootstrap support for L0P8N3 as seed ortholog is 100%.
Bootstrap support for F1RXA7 as seed ortholog is 100%.

Group of orthologs #401. Best score 324 bits
Score difference with first non-orthologous sequence - P.jiroveci:324 S.scrofa:262

L0PBD2              	100.00%		F1S6V3              	100.00%
Bootstrap support for L0PBD2 as seed ortholog is 100%.
Bootstrap support for F1S6V3 as seed ortholog is 100%.

Group of orthologs #402. Best score 324 bits
Score difference with first non-orthologous sequence - P.jiroveci:324 S.scrofa:118

L0PBY3              	100.00%		F1S8Q4              	100.00%
Bootstrap support for L0PBY3 as seed ortholog is 100%.
Bootstrap support for F1S8Q4 as seed ortholog is 99%.

Group of orthologs #403. Best score 323 bits
Score difference with first non-orthologous sequence - P.jiroveci:323 S.scrofa:199

L0PCG4              	100.00%		F1RQ91              	100.00%
Bootstrap support for L0PCG4 as seed ortholog is 100%.
Bootstrap support for F1RQ91 as seed ortholog is 100%.

Group of orthologs #404. Best score 323 bits
Score difference with first non-orthologous sequence - P.jiroveci:214 S.scrofa:187

L0PBM6              	100.00%		F1SCG7              	100.00%
Bootstrap support for L0PBM6 as seed ortholog is 99%.
Bootstrap support for F1SCG7 as seed ortholog is 99%.

Group of orthologs #405. Best score 322 bits
Score difference with first non-orthologous sequence - P.jiroveci:322 S.scrofa:322

L0P8N0              	100.00%		I3LUP1              	100.00%
                    	       		I3L5P2              	64.04%
Bootstrap support for L0P8N0 as seed ortholog is 100%.
Bootstrap support for I3LUP1 as seed ortholog is 100%.

Group of orthologs #406. Best score 322 bits
Score difference with first non-orthologous sequence - P.jiroveci:322 S.scrofa:322

L0PFC9              	100.00%		D0G6X4              	100.00%
Bootstrap support for L0PFC9 as seed ortholog is 100%.
Bootstrap support for D0G6X4 as seed ortholog is 100%.

Group of orthologs #407. Best score 322 bits
Score difference with first non-orthologous sequence - P.jiroveci:322 S.scrofa:322

L0PCY9              	100.00%		F1RYU6              	100.00%
Bootstrap support for L0PCY9 as seed ortholog is 100%.
Bootstrap support for F1RYU6 as seed ortholog is 100%.

Group of orthologs #408. Best score 321 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 S.scrofa:191

L0P983              	100.00%		F1SAI8              	100.00%
Bootstrap support for L0P983 as seed ortholog is 89%.
Bootstrap support for F1SAI8 as seed ortholog is 99%.

Group of orthologs #409. Best score 319 bits
Score difference with first non-orthologous sequence - P.jiroveci:319 S.scrofa:211

L0PFE9              	100.00%		F1RRK0              	100.00%
Bootstrap support for L0PFE9 as seed ortholog is 100%.
Bootstrap support for F1RRK0 as seed ortholog is 100%.

Group of orthologs #410. Best score 319 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 S.scrofa:68

L0PA26              	100.00%		I3LKS0              	100.00%
Bootstrap support for L0PA26 as seed ortholog is 99%.
Bootstrap support for I3LKS0 as seed ortholog is 98%.

Group of orthologs #411. Best score 318 bits
Score difference with first non-orthologous sequence - P.jiroveci:318 S.scrofa:318

L0PF92              	100.00%		F1RMC7              	100.00%
Bootstrap support for L0PF92 as seed ortholog is 100%.
Bootstrap support for F1RMC7 as seed ortholog is 100%.

Group of orthologs #412. Best score 317 bits
Score difference with first non-orthologous sequence - P.jiroveci:317 S.scrofa:317

L0PCK3              	100.00%		I3L742              	100.00%
                    	       		F1SPF6              	17.11%
Bootstrap support for L0PCK3 as seed ortholog is 100%.
Bootstrap support for I3L742 as seed ortholog is 100%.

Group of orthologs #413. Best score 317 bits
Score difference with first non-orthologous sequence - P.jiroveci:317 S.scrofa:317

L0PD26              	100.00%		I3LPP4              	100.00%
L0PD32              	98.92%		
Bootstrap support for L0PD26 as seed ortholog is 100%.
Bootstrap support for I3LPP4 as seed ortholog is 100%.

Group of orthologs #414. Best score 317 bits
Score difference with first non-orthologous sequence - P.jiroveci:317 S.scrofa:243

L0PB00              	100.00%		F1SN94              	100.00%
Bootstrap support for L0PB00 as seed ortholog is 100%.
Bootstrap support for F1SN94 as seed ortholog is 100%.

Group of orthologs #415. Best score 316 bits
Score difference with first non-orthologous sequence - P.jiroveci:238 S.scrofa:235

L0PDL9              	100.00%		I3L6B9              	100.00%
Bootstrap support for L0PDL9 as seed ortholog is 100%.
Bootstrap support for I3L6B9 as seed ortholog is 100%.

Group of orthologs #416. Best score 315 bits
Score difference with first non-orthologous sequence - P.jiroveci:315 S.scrofa:315

L0PD68              	100.00%		A5GFZ5              	100.00%
Bootstrap support for L0PD68 as seed ortholog is 100%.
Bootstrap support for A5GFZ5 as seed ortholog is 100%.

Group of orthologs #417. Best score 314 bits
Score difference with first non-orthologous sequence - P.jiroveci:314 S.scrofa:20

L0PGR0              	100.00%		Q2QC87              	100.00%
                    	       		F1SR72              	60.47%
Bootstrap support for L0PGR0 as seed ortholog is 100%.
Bootstrap support for Q2QC87 as seed ortholog is 64%.
Alternative seed ortholog is F1RJV7 (20 bits away from this cluster)

Group of orthologs #418. Best score 314 bits
Score difference with first non-orthologous sequence - P.jiroveci:240 S.scrofa:314

L0P8R8              	100.00%		F1SJN5              	100.00%
Bootstrap support for L0P8R8 as seed ortholog is 100%.
Bootstrap support for F1SJN5 as seed ortholog is 100%.

Group of orthologs #419. Best score 313 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 S.scrofa:50

L0P6X2              	100.00%		Q007T2              	100.00%
Bootstrap support for L0P6X2 as seed ortholog is 100%.
Bootstrap support for Q007T2 as seed ortholog is 95%.

Group of orthologs #420. Best score 312 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 S.scrofa:312

L0PB70              	100.00%		F1RK75              	100.00%
                    	       		F1SJQ3              	100.00%
                    	       		F1RZ71              	33.49%
Bootstrap support for L0PB70 as seed ortholog is 99%.
Bootstrap support for F1RK75 as seed ortholog is 100%.
Bootstrap support for F1SJQ3 as seed ortholog is 100%.

Group of orthologs #421. Best score 311 bits
Score difference with first non-orthologous sequence - P.jiroveci:216 S.scrofa:311

L0P8W4              	100.00%		F1S742              	100.00%
Bootstrap support for L0P8W4 as seed ortholog is 99%.
Bootstrap support for F1S742 as seed ortholog is 100%.

Group of orthologs #422. Best score 311 bits
Score difference with first non-orthologous sequence - P.jiroveci:311 S.scrofa:311

L0PFG1              	100.00%		F1RYL9              	100.00%
Bootstrap support for L0PFG1 as seed ortholog is 100%.
Bootstrap support for F1RYL9 as seed ortholog is 100%.

Group of orthologs #423. Best score 311 bits
Score difference with first non-orthologous sequence - P.jiroveci:311 S.scrofa:311

L0P9G9              	100.00%		F1SHY2              	100.00%
Bootstrap support for L0P9G9 as seed ortholog is 100%.
Bootstrap support for F1SHY2 as seed ortholog is 100%.

Group of orthologs #424. Best score 310 bits
Score difference with first non-orthologous sequence - P.jiroveci:310 S.scrofa:310

L0PAU5              	100.00%		F1SFQ0              	100.00%
Bootstrap support for L0PAU5 as seed ortholog is 100%.
Bootstrap support for F1SFQ0 as seed ortholog is 100%.

Group of orthologs #425. Best score 310 bits
Score difference with first non-orthologous sequence - P.jiroveci:310 S.scrofa:310

L0PBT3              	100.00%		F1SGN4              	100.00%
Bootstrap support for L0PBT3 as seed ortholog is 100%.
Bootstrap support for F1SGN4 as seed ortholog is 100%.

Group of orthologs #426. Best score 309 bits
Score difference with first non-orthologous sequence - P.jiroveci:309 S.scrofa:309

L0P9X4              	100.00%		Q0Z8U2              	100.00%
Bootstrap support for L0P9X4 as seed ortholog is 100%.
Bootstrap support for Q0Z8U2 as seed ortholog is 100%.

Group of orthologs #427. Best score 308 bits
Score difference with first non-orthologous sequence - P.jiroveci:308 S.scrofa:308

L0PF98              	100.00%		F1RMJ9              	100.00%
                    	       		F1RPE0              	47.45%
Bootstrap support for L0PF98 as seed ortholog is 100%.
Bootstrap support for F1RMJ9 as seed ortholog is 100%.

Group of orthologs #428. Best score 307 bits
Score difference with first non-orthologous sequence - P.jiroveci:219 S.scrofa:145

L0P966              	100.00%		F1RFL5              	100.00%
Bootstrap support for L0P966 as seed ortholog is 99%.
Bootstrap support for F1RFL5 as seed ortholog is 99%.

Group of orthologs #429. Best score 307 bits
Score difference with first non-orthologous sequence - P.jiroveci:307 S.scrofa:307

L0P870              	100.00%		I3L829              	100.00%
Bootstrap support for L0P870 as seed ortholog is 100%.
Bootstrap support for I3L829 as seed ortholog is 100%.

Group of orthologs #430. Best score 306 bits
Score difference with first non-orthologous sequence - P.jiroveci:306 S.scrofa:306

L0PAP4              	100.00%		F1REX9              	100.00%
                    	       		F1RNS7              	20.09%
Bootstrap support for L0PAP4 as seed ortholog is 100%.
Bootstrap support for F1REX9 as seed ortholog is 100%.

Group of orthologs #431. Best score 305 bits
Score difference with first non-orthologous sequence - P.jiroveci:305 S.scrofa:305

L0PAG0              	100.00%		F1SI10              	100.00%
                    	       		Q29195              	100.00%
Bootstrap support for L0PAG0 as seed ortholog is 100%.
Bootstrap support for F1SI10 as seed ortholog is 100%.
Bootstrap support for Q29195 as seed ortholog is 100%.

Group of orthologs #432. Best score 305 bits
Score difference with first non-orthologous sequence - P.jiroveci:305 S.scrofa:305

L0PEX5              	100.00%		F1RS43              	100.00%
Bootstrap support for L0PEX5 as seed ortholog is 100%.
Bootstrap support for F1RS43 as seed ortholog is 100%.

Group of orthologs #433. Best score 304 bits
Score difference with first non-orthologous sequence - P.jiroveci:304 S.scrofa:304

L0PB18              	100.00%		F1RNH3              	100.00%
Bootstrap support for L0PB18 as seed ortholog is 100%.
Bootstrap support for F1RNH3 as seed ortholog is 100%.

Group of orthologs #434. Best score 304 bits
Score difference with first non-orthologous sequence - P.jiroveci:304 S.scrofa:304

L0PB32              	100.00%		F1SE95              	100.00%
Bootstrap support for L0PB32 as seed ortholog is 100%.
Bootstrap support for F1SE95 as seed ortholog is 100%.

Group of orthologs #435. Best score 303 bits
Score difference with first non-orthologous sequence - P.jiroveci:303 S.scrofa:303

L0PD03              	100.00%		F2Z543              	100.00%
                    	       		F1RWF5              	53.85%
Bootstrap support for L0PD03 as seed ortholog is 100%.
Bootstrap support for F2Z543 as seed ortholog is 100%.

Group of orthologs #436. Best score 303 bits
Score difference with first non-orthologous sequence - P.jiroveci:303 S.scrofa:214

L0PH80              	100.00%		Q4KRV1              	100.00%
Bootstrap support for L0PH80 as seed ortholog is 100%.
Bootstrap support for Q4KRV1 as seed ortholog is 100%.

Group of orthologs #437. Best score 302 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 S.scrofa:134

L0PA63              	100.00%		I3LHZ9              	100.00%
                    	       		I3LUG7              	100.00%
Bootstrap support for L0PA63 as seed ortholog is 85%.
Bootstrap support for I3LHZ9 as seed ortholog is 98%.
Bootstrap support for I3LUG7 as seed ortholog is 99%.

Group of orthologs #438. Best score 302 bits
Score difference with first non-orthologous sequence - P.jiroveci:302 S.scrofa:302

L0P8B2              	100.00%		F1RZV4              	100.00%
Bootstrap support for L0P8B2 as seed ortholog is 100%.
Bootstrap support for F1RZV4 as seed ortholog is 100%.

Group of orthologs #439. Best score 302 bits
Score difference with first non-orthologous sequence - P.jiroveci:302 S.scrofa:234

L0PF83              	100.00%		I3LIR4              	100.00%
Bootstrap support for L0PF83 as seed ortholog is 100%.
Bootstrap support for I3LIR4 as seed ortholog is 100%.

Group of orthologs #440. Best score 301 bits
Score difference with first non-orthologous sequence - P.jiroveci:301 S.scrofa:21

L0PG34              	100.00%		I3LEE1              	100.00%
                    	       		F1RZS7              	51.67%
Bootstrap support for L0PG34 as seed ortholog is 100%.
Bootstrap support for I3LEE1 as seed ortholog is 74%.
Alternative seed ortholog is F1RF39 (21 bits away from this cluster)

Group of orthologs #441. Best score 300 bits
Score difference with first non-orthologous sequence - P.jiroveci:300 S.scrofa:300

L0PCI3              	100.00%		F1S1X4              	100.00%
Bootstrap support for L0PCI3 as seed ortholog is 100%.
Bootstrap support for F1S1X4 as seed ortholog is 100%.

Group of orthologs #442. Best score 300 bits
Score difference with first non-orthologous sequence - P.jiroveci:300 S.scrofa:300

L0PF79              	100.00%		I3LBY0              	100.00%
Bootstrap support for L0PF79 as seed ortholog is 100%.
Bootstrap support for I3LBY0 as seed ortholog is 100%.

Group of orthologs #443. Best score 299 bits
Score difference with first non-orthologous sequence - P.jiroveci:299 S.scrofa:166

L0PBM0              	100.00%		F1S845              	100.00%
                    	       		F1RG42              	16.44%
Bootstrap support for L0PBM0 as seed ortholog is 100%.
Bootstrap support for F1S845 as seed ortholog is 99%.

Group of orthologs #444. Best score 299 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 S.scrofa:111

L0P8B4              	100.00%		F2Z4Z7              	100.00%
                    	       		F1SGC8              	77.04%
Bootstrap support for L0P8B4 as seed ortholog is 100%.
Bootstrap support for F2Z4Z7 as seed ortholog is 99%.

Group of orthologs #445. Best score 299 bits
Score difference with first non-orthologous sequence - P.jiroveci:178 S.scrofa:125

L0PB10              	100.00%		Q58DD9              	100.00%
Bootstrap support for L0PB10 as seed ortholog is 100%.
Bootstrap support for Q58DD9 as seed ortholog is 99%.

Group of orthologs #446. Best score 298 bits
Score difference with first non-orthologous sequence - P.jiroveci:298 S.scrofa:251

L0PDZ2              	100.00%		A5GFZ6              	100.00%
Bootstrap support for L0PDZ2 as seed ortholog is 100%.
Bootstrap support for A5GFZ6 as seed ortholog is 100%.

Group of orthologs #447. Best score 298 bits
Score difference with first non-orthologous sequence - P.jiroveci:298 S.scrofa:298

L0PFI8              	100.00%		F2Z5E6              	100.00%
Bootstrap support for L0PFI8 as seed ortholog is 100%.
Bootstrap support for F2Z5E6 as seed ortholog is 100%.

Group of orthologs #448. Best score 297 bits
Score difference with first non-orthologous sequence - P.jiroveci:44 S.scrofa:80

L0PD71              	100.00%		C9E1C9              	100.00%
                    	       		I3LCE5              	17.86%
Bootstrap support for L0PD71 as seed ortholog is 89%.
Bootstrap support for C9E1C9 as seed ortholog is 98%.

Group of orthologs #449. Best score 297 bits
Score difference with first non-orthologous sequence - P.jiroveci:297 S.scrofa:297

L0P7I8              	100.00%		A0PFK7              	100.00%
Bootstrap support for L0P7I8 as seed ortholog is 100%.
Bootstrap support for A0PFK7 as seed ortholog is 100%.

Group of orthologs #450. Best score 297 bits
Score difference with first non-orthologous sequence - P.jiroveci:297 S.scrofa:297

L0PDS0              	100.00%		F1SLS9              	100.00%
Bootstrap support for L0PDS0 as seed ortholog is 100%.
Bootstrap support for F1SLS9 as seed ortholog is 100%.

Group of orthologs #451. Best score 297 bits
Score difference with first non-orthologous sequence - P.jiroveci:297 S.scrofa:297

L0PDC7              	100.00%		F1SUE3              	100.00%
Bootstrap support for L0PDC7 as seed ortholog is 100%.
Bootstrap support for F1SUE3 as seed ortholog is 100%.

Group of orthologs #452. Best score 296 bits
Score difference with first non-orthologous sequence - P.jiroveci:296 S.scrofa:296

L0PDY1              	100.00%		I3LKA2              	100.00%
                    	       		F1SAQ0              	23.16%
Bootstrap support for L0PDY1 as seed ortholog is 100%.
Bootstrap support for I3LKA2 as seed ortholog is 100%.

Group of orthologs #453. Best score 296 bits
Score difference with first non-orthologous sequence - P.jiroveci:48 S.scrofa:296

L0PAM1              	100.00%		P00346              	100.00%
                    	       		I3LB44              	80.71%
Bootstrap support for L0PAM1 as seed ortholog is 88%.
Bootstrap support for P00346 as seed ortholog is 100%.

Group of orthologs #454. Best score 296 bits
Score difference with first non-orthologous sequence - P.jiroveci:175 S.scrofa:296

L0P9F3              	100.00%		F1RQU7              	100.00%
Bootstrap support for L0P9F3 as seed ortholog is 99%.
Bootstrap support for F1RQU7 as seed ortholog is 100%.

Group of orthologs #455. Best score 296 bits
Score difference with first non-orthologous sequence - P.jiroveci:252 S.scrofa:247

L0P8I1              	100.00%		F2Z5F3              	100.00%
Bootstrap support for L0P8I1 as seed ortholog is 100%.
Bootstrap support for F2Z5F3 as seed ortholog is 100%.

Group of orthologs #456. Best score 295 bits
Score difference with first non-orthologous sequence - P.jiroveci:295 S.scrofa:295

L0P8R6              	100.00%		F1RL05              	100.00%
Bootstrap support for L0P8R6 as seed ortholog is 100%.
Bootstrap support for F1RL05 as seed ortholog is 100%.

Group of orthologs #457. Best score 295 bits
Score difference with first non-orthologous sequence - P.jiroveci:295 S.scrofa:295

L0PHK3              	100.00%		F1RKX2              	100.00%
Bootstrap support for L0PHK3 as seed ortholog is 100%.
Bootstrap support for F1RKX2 as seed ortholog is 100%.

Group of orthologs #458. Best score 295 bits
Score difference with first non-orthologous sequence - P.jiroveci:211 S.scrofa:204

L0PAL2              	100.00%		F1SV90              	100.00%
Bootstrap support for L0PAL2 as seed ortholog is 100%.
Bootstrap support for F1SV90 as seed ortholog is 100%.

Group of orthologs #459. Best score 295 bits
Score difference with first non-orthologous sequence - P.jiroveci:295 S.scrofa:295

L0PHG7              	100.00%		Q29214              	100.00%
Bootstrap support for L0PHG7 as seed ortholog is 100%.
Bootstrap support for Q29214 as seed ortholog is 100%.

Group of orthologs #460. Best score 294 bits
Score difference with first non-orthologous sequence - P.jiroveci:294 S.scrofa:294

L0PG22              	100.00%		F1S569              	100.00%
L0PB04              	70.98%		
Bootstrap support for L0PG22 as seed ortholog is 100%.
Bootstrap support for F1S569 as seed ortholog is 100%.

Group of orthologs #461. Best score 293 bits
Score difference with first non-orthologous sequence - P.jiroveci:293 S.scrofa:293

L0PBT9              	100.00%		F1RFD3              	100.00%
L0P9Y0              	42.18%		I3LQZ7              	89.99%
Bootstrap support for L0PBT9 as seed ortholog is 100%.
Bootstrap support for F1RFD3 as seed ortholog is 100%.

Group of orthologs #462. Best score 292 bits
Score difference with first non-orthologous sequence - P.jiroveci:292 S.scrofa:292

L0P961              	100.00%		F1RI39              	100.00%
                    	       		F1RHL9              	76.49%
                    	       		I3LCP0              	72.36%
                    	       		I3LS04              	33.31%
Bootstrap support for L0P961 as seed ortholog is 100%.
Bootstrap support for F1RI39 as seed ortholog is 100%.

Group of orthologs #463. Best score 292 bits
Score difference with first non-orthologous sequence - P.jiroveci:292 S.scrofa:292

L0PB28              	100.00%		F2Z5J4              	100.00%
Bootstrap support for L0PB28 as seed ortholog is 100%.
Bootstrap support for F2Z5J4 as seed ortholog is 100%.

Group of orthologs #464. Best score 291 bits
Score difference with first non-orthologous sequence - P.jiroveci:291 S.scrofa:291

L0PDV1              	100.00%		F1SAB4              	100.00%
Bootstrap support for L0PDV1 as seed ortholog is 100%.
Bootstrap support for F1SAB4 as seed ortholog is 100%.

Group of orthologs #465. Best score 291 bits
Score difference with first non-orthologous sequence - P.jiroveci:105 S.scrofa:88

L0PB47              	100.00%		I3L5D4              	100.00%
Bootstrap support for L0PB47 as seed ortholog is 99%.
Bootstrap support for I3L5D4 as seed ortholog is 98%.

Group of orthologs #466. Best score 289 bits
Score difference with first non-orthologous sequence - P.jiroveci:211 S.scrofa:200

L0PEP1              	100.00%		F2Z5I2              	100.00%
L0PIJ3              	81.67%		I3LPP8              	26.02%
Bootstrap support for L0PEP1 as seed ortholog is 99%.
Bootstrap support for F2Z5I2 as seed ortholog is 99%.

Group of orthologs #467. Best score 289 bits
Score difference with first non-orthologous sequence - P.jiroveci:289 S.scrofa:289

L0PDL6              	100.00%		F1RQR0              	100.00%
Bootstrap support for L0PDL6 as seed ortholog is 100%.
Bootstrap support for F1RQR0 as seed ortholog is 100%.

Group of orthologs #468. Best score 289 bits
Score difference with first non-orthologous sequence - P.jiroveci:289 S.scrofa:289

L0PFZ0              	100.00%		F1SFR1              	100.00%
Bootstrap support for L0PFZ0 as seed ortholog is 100%.
Bootstrap support for F1SFR1 as seed ortholog is 100%.

Group of orthologs #469. Best score 288 bits
Score difference with first non-orthologous sequence - P.jiroveci:288 S.scrofa:288

L0PG44              	100.00%		F1RHR9              	100.00%
Bootstrap support for L0PG44 as seed ortholog is 100%.
Bootstrap support for F1RHR9 as seed ortholog is 100%.

Group of orthologs #470. Best score 288 bits
Score difference with first non-orthologous sequence - P.jiroveci:288 S.scrofa:288

L0PHG9              	100.00%		F1S365              	100.00%
Bootstrap support for L0PHG9 as seed ortholog is 100%.
Bootstrap support for F1S365 as seed ortholog is 100%.

Group of orthologs #471. Best score 287 bits
Score difference with first non-orthologous sequence - P.jiroveci:287 S.scrofa:287

L0PAJ2              	100.00%		F1RJN0              	100.00%
Bootstrap support for L0PAJ2 as seed ortholog is 100%.
Bootstrap support for F1RJN0 as seed ortholog is 100%.

Group of orthologs #472. Best score 287 bits
Score difference with first non-orthologous sequence - P.jiroveci:287 S.scrofa:287

L0PBK2              	100.00%		F1SN95              	100.00%
Bootstrap support for L0PBK2 as seed ortholog is 100%.
Bootstrap support for F1SN95 as seed ortholog is 100%.

Group of orthologs #473. Best score 287 bits
Score difference with first non-orthologous sequence - P.jiroveci:287 S.scrofa:287

L0P861              	100.00%		I3LQN4              	100.00%
Bootstrap support for L0P861 as seed ortholog is 100%.
Bootstrap support for I3LQN4 as seed ortholog is 100%.

Group of orthologs #474. Best score 285 bits
Score difference with first non-orthologous sequence - P.jiroveci:285 S.scrofa:147

L0PFS8              	100.00%		F2Z5K2              	100.00%
Bootstrap support for L0PFS8 as seed ortholog is 100%.
Bootstrap support for F2Z5K2 as seed ortholog is 100%.

Group of orthologs #475. Best score 284 bits
Score difference with first non-orthologous sequence - P.jiroveci:284 S.scrofa:202

L0PEC0              	100.00%		F1RN05              	100.00%
Bootstrap support for L0PEC0 as seed ortholog is 100%.
Bootstrap support for F1RN05 as seed ortholog is 100%.

Group of orthologs #476. Best score 284 bits
Score difference with first non-orthologous sequence - P.jiroveci:284 S.scrofa:284

L0PD87              	100.00%		F1SK65              	100.00%
Bootstrap support for L0PD87 as seed ortholog is 100%.
Bootstrap support for F1SK65 as seed ortholog is 100%.

Group of orthologs #477. Best score 283 bits
Score difference with first non-orthologous sequence - P.jiroveci:283 S.scrofa:283

L0PEM6              	100.00%		I3L8J8              	100.00%
Bootstrap support for L0PEM6 as seed ortholog is 100%.
Bootstrap support for I3L8J8 as seed ortholog is 100%.

Group of orthologs #478. Best score 282 bits
Score difference with first non-orthologous sequence - P.jiroveci:282 S.scrofa:223

L0PB03              	100.00%		F1SBA5              	100.00%
                    	       		I3LVJ7              	26.21%
Bootstrap support for L0PB03 as seed ortholog is 100%.
Bootstrap support for F1SBA5 as seed ortholog is 100%.

Group of orthologs #479. Best score 282 bits
Score difference with first non-orthologous sequence - P.jiroveci:282 S.scrofa:187

L0PHJ3              	100.00%		F1SDG0              	100.00%
Bootstrap support for L0PHJ3 as seed ortholog is 100%.
Bootstrap support for F1SDG0 as seed ortholog is 100%.

Group of orthologs #480. Best score 282 bits
Score difference with first non-orthologous sequence - P.jiroveci:183 S.scrofa:85

L0PC59              	100.00%		Q007T5              	100.00%
Bootstrap support for L0PC59 as seed ortholog is 100%.
Bootstrap support for Q007T5 as seed ortholog is 100%.

Group of orthologs #481. Best score 281 bits
Score difference with first non-orthologous sequence - P.jiroveci:281 S.scrofa:189

L0PEM3              	100.00%		I3L945              	100.00%
Bootstrap support for L0PEM3 as seed ortholog is 100%.
Bootstrap support for I3L945 as seed ortholog is 100%.

Group of orthologs #482. Best score 280 bits
Score difference with first non-orthologous sequence - P.jiroveci:280 S.scrofa:280

L0PBE0              	100.00%		F1SMX5              	100.00%
                    	       		F1RK18              	63.96%
                    	       		I3LR97              	24.11%
Bootstrap support for L0PBE0 as seed ortholog is 100%.
Bootstrap support for F1SMX5 as seed ortholog is 100%.

Group of orthologs #483. Best score 280 bits
Score difference with first non-orthologous sequence - P.jiroveci:280 S.scrofa:21

L0PG89              	100.00%		P00795              	100.00%
                    	       		F1RH37              	20.42%
                    	       		P00791              	6.50%
Bootstrap support for L0PG89 as seed ortholog is 100%.
Bootstrap support for P00795 as seed ortholog is 43%.
Alternative seed ortholog is F1RUW7 (21 bits away from this cluster)

Group of orthologs #484. Best score 280 bits
Score difference with first non-orthologous sequence - P.jiroveci:232 S.scrofa:186

L0PFE0              	100.00%		F1RFA8              	100.00%
Bootstrap support for L0PFE0 as seed ortholog is 100%.
Bootstrap support for F1RFA8 as seed ortholog is 100%.

Group of orthologs #485. Best score 280 bits
Score difference with first non-orthologous sequence - P.jiroveci:280 S.scrofa:280

L0PBH8              	100.00%		F1S2K2              	100.00%
Bootstrap support for L0PBH8 as seed ortholog is 100%.
Bootstrap support for F1S2K2 as seed ortholog is 100%.

Group of orthologs #486. Best score 280 bits
Score difference with first non-orthologous sequence - P.jiroveci:280 S.scrofa:280

L0P865              	100.00%		F1SKU1              	100.00%
Bootstrap support for L0P865 as seed ortholog is 100%.
Bootstrap support for F1SKU1 as seed ortholog is 100%.

Group of orthologs #487. Best score 278 bits
Score difference with first non-orthologous sequence - P.jiroveci:278 S.scrofa:97

L0P9F6              	100.00%		F1RRA6              	100.00%
                    	       		F2Z565              	42.12%
                    	       		Q6QRN9              	41.85%
                    	       		F1RZQ6              	41.30%
Bootstrap support for L0P9F6 as seed ortholog is 100%.
Bootstrap support for F1RRA6 as seed ortholog is 99%.

Group of orthologs #488. Best score 278 bits
Score difference with first non-orthologous sequence - P.jiroveci:278 S.scrofa:278

L0PEB1              	100.00%		F1RKC0              	100.00%
                    	       		F1REX8              	40.64%
Bootstrap support for L0PEB1 as seed ortholog is 100%.
Bootstrap support for F1RKC0 as seed ortholog is 100%.

Group of orthologs #489. Best score 278 bits
Score difference with first non-orthologous sequence - P.jiroveci:278 S.scrofa:278

L0P9T5              	100.00%		F1S4X9              	100.00%
Bootstrap support for L0P9T5 as seed ortholog is 100%.
Bootstrap support for F1S4X9 as seed ortholog is 100%.

Group of orthologs #490. Best score 277 bits
Score difference with first non-orthologous sequence - P.jiroveci:277 S.scrofa:58

L0PGF2              	100.00%		I3L7E7              	100.00%
                    	       		F1RWJ1              	25.78%
Bootstrap support for L0PGF2 as seed ortholog is 100%.
Bootstrap support for I3L7E7 as seed ortholog is 84%.

Group of orthologs #491. Best score 277 bits
Score difference with first non-orthologous sequence - P.jiroveci:277 S.scrofa:277

L0PGV8              	100.00%		F1S754              	100.00%
Bootstrap support for L0PGV8 as seed ortholog is 100%.
Bootstrap support for F1S754 as seed ortholog is 100%.

Group of orthologs #492. Best score 277 bits
Score difference with first non-orthologous sequence - P.jiroveci:277 S.scrofa:277

L0P7Q3              	100.00%		I3L8T3              	100.00%
Bootstrap support for L0P7Q3 as seed ortholog is 100%.
Bootstrap support for I3L8T3 as seed ortholog is 100%.

Group of orthologs #493. Best score 277 bits
Score difference with first non-orthologous sequence - P.jiroveci:232 S.scrofa:188

L0PE04              	100.00%		I3LNC4              	100.00%
Bootstrap support for L0PE04 as seed ortholog is 100%.
Bootstrap support for I3LNC4 as seed ortholog is 100%.

Group of orthologs #494. Best score 276 bits
Score difference with first non-orthologous sequence - P.jiroveci:276 S.scrofa:135

L0PE17              	100.00%		F2Z5L7              	100.00%
Bootstrap support for L0PE17 as seed ortholog is 100%.
Bootstrap support for F2Z5L7 as seed ortholog is 99%.

Group of orthologs #495. Best score 275 bits
Score difference with first non-orthologous sequence - P.jiroveci:275 S.scrofa:275

L0PAD9              	100.00%		F1RLV4              	100.00%
Bootstrap support for L0PAD9 as seed ortholog is 100%.
Bootstrap support for F1RLV4 as seed ortholog is 100%.

Group of orthologs #496. Best score 274 bits
Score difference with first non-orthologous sequence - P.jiroveci:274 S.scrofa:274

L0PCU5              	100.00%		F1RK64              	100.00%
Bootstrap support for L0PCU5 as seed ortholog is 100%.
Bootstrap support for F1RK64 as seed ortholog is 100%.

Group of orthologs #497. Best score 274 bits
Score difference with first non-orthologous sequence - P.jiroveci:274 S.scrofa:220

L0PHN0              	100.00%		F1SPR8              	100.00%
Bootstrap support for L0PHN0 as seed ortholog is 100%.
Bootstrap support for F1SPR8 as seed ortholog is 100%.

Group of orthologs #498. Best score 273 bits
Score difference with first non-orthologous sequence - P.jiroveci:215 S.scrofa:134

L0PGP6              	100.00%		F1SUT0              	100.00%
                    	       		F2Z5S1              	20.86%
Bootstrap support for L0PGP6 as seed ortholog is 100%.
Bootstrap support for F1SUT0 as seed ortholog is 100%.

Group of orthologs #499. Best score 273 bits
Score difference with first non-orthologous sequence - P.jiroveci:222 S.scrofa:209

L0PHK8              	100.00%		A5GFN6              	100.00%
Bootstrap support for L0PHK8 as seed ortholog is 100%.
Bootstrap support for A5GFN6 as seed ortholog is 100%.

Group of orthologs #500. Best score 273 bits
Score difference with first non-orthologous sequence - P.jiroveci:273 S.scrofa:273

L0P9S7              	100.00%		F1SSF8              	100.00%
Bootstrap support for L0P9S7 as seed ortholog is 100%.
Bootstrap support for F1SSF8 as seed ortholog is 100%.

Group of orthologs #501. Best score 272 bits
Score difference with first non-orthologous sequence - P.jiroveci:163 S.scrofa:109

L0P9E4              	100.00%		C4MXZ1              	100.00%
                    	       		Q56P20              	33.33%
                    	       		B9V4F0              	29.17%
Bootstrap support for L0P9E4 as seed ortholog is 100%.
Bootstrap support for C4MXZ1 as seed ortholog is 99%.

Group of orthologs #502. Best score 272 bits
Score difference with first non-orthologous sequence - P.jiroveci:142 S.scrofa:272

L0P7L8              	100.00%		F1SL05              	100.00%
                    	       		F1RYI2              	16.98%
                    	       		F1SEZ5              	7.70%
Bootstrap support for L0P7L8 as seed ortholog is 99%.
Bootstrap support for F1SL05 as seed ortholog is 100%.

Group of orthologs #503. Best score 272 bits
Score difference with first non-orthologous sequence - P.jiroveci:272 S.scrofa:77

L0PCJ2              	100.00%		F1S9C9              	100.00%
                    	       		F1S9F7              	10.38%
Bootstrap support for L0PCJ2 as seed ortholog is 100%.
Bootstrap support for F1S9C9 as seed ortholog is 99%.

Group of orthologs #504. Best score 272 bits
Score difference with first non-orthologous sequence - P.jiroveci:272 S.scrofa:272

L0P790              	100.00%		F1S7V9              	100.00%
Bootstrap support for L0P790 as seed ortholog is 100%.
Bootstrap support for F1S7V9 as seed ortholog is 100%.

Group of orthologs #505. Best score 272 bits
Score difference with first non-orthologous sequence - P.jiroveci:272 S.scrofa:87

L0PFJ5              	100.00%		F1SAK7              	100.00%
Bootstrap support for L0PFJ5 as seed ortholog is 100%.
Bootstrap support for F1SAK7 as seed ortholog is 94%.

Group of orthologs #506. Best score 272 bits
Score difference with first non-orthologous sequence - P.jiroveci:272 S.scrofa:202

L0PFU1              	100.00%		F2Z528              	100.00%
Bootstrap support for L0PFU1 as seed ortholog is 100%.
Bootstrap support for F2Z528 as seed ortholog is 100%.

Group of orthologs #507. Best score 271 bits
Score difference with first non-orthologous sequence - P.jiroveci:1 S.scrofa:271

L0PAI9              	100.00%		F1SIK9              	100.00%
                    	       		K7GM43              	100.00%
                    	       		F1RRN6              	61.09%
                    	       		F1RG60              	40.52%
                    	       		F1SIP0              	29.64%
                    	       		F1RJU9              	9.31%
                    	       		F1RYS5              	8.79%
                    	       		K7GKL7              	7.03%
                    	       		I3LBW6              	7.03%
                    	       		F1RIT8              	5.80%
Bootstrap support for L0PAI9 as seed ortholog is 52%.
Alternative seed ortholog is L0PCM1 (1 bits away from this cluster)
Bootstrap support for F1SIK9 as seed ortholog is 100%.
Bootstrap support for K7GM43 as seed ortholog is 100%.

Group of orthologs #508. Best score 271 bits
Score difference with first non-orthologous sequence - P.jiroveci:271 S.scrofa:74

L0PEJ1              	100.00%		F1STJ2              	100.00%
                    	       		I3LRF7              	100.00%
                    	       		I3LDQ8              	81.03%
                    	       		F1STJ0              	60.43%
Bootstrap support for L0PEJ1 as seed ortholog is 100%.
Bootstrap support for F1STJ2 as seed ortholog is 96%.
Bootstrap support for I3LRF7 as seed ortholog is 95%.

Group of orthologs #509. Best score 271 bits
Score difference with first non-orthologous sequence - P.jiroveci:218 S.scrofa:80

L0PH42              	100.00%		F1RW22              	100.00%
                    	       		F1RTR5              	63.15%
Bootstrap support for L0PH42 as seed ortholog is 100%.
Bootstrap support for F1RW22 as seed ortholog is 99%.

Group of orthologs #510. Best score 271 bits
Score difference with first non-orthologous sequence - P.jiroveci:271 S.scrofa:184

L0P9Z7              	100.00%		F1SI06              	100.00%
Bootstrap support for L0P9Z7 as seed ortholog is 100%.
Bootstrap support for F1SI06 as seed ortholog is 99%.

Group of orthologs #511. Best score 271 bits
Score difference with first non-orthologous sequence - P.jiroveci:271 S.scrofa:271

L0PI09              	100.00%		F1SSU6              	100.00%
Bootstrap support for L0PI09 as seed ortholog is 100%.
Bootstrap support for F1SSU6 as seed ortholog is 100%.

Group of orthologs #512. Best score 271 bits
Score difference with first non-orthologous sequence - P.jiroveci:271 S.scrofa:221

L0P8L5              	100.00%		I3LI72              	100.00%
Bootstrap support for L0P8L5 as seed ortholog is 100%.
Bootstrap support for I3LI72 as seed ortholog is 100%.

Group of orthologs #513. Best score 269 bits
Score difference with first non-orthologous sequence - P.jiroveci:269 S.scrofa:189

L0PET2              	100.00%		A1XQU1              	100.00%
L0PAE5              	83.76%		
Bootstrap support for L0PET2 as seed ortholog is 100%.
Bootstrap support for A1XQU1 as seed ortholog is 100%.

Group of orthologs #514. Best score 269 bits
Score difference with first non-orthologous sequence - P.jiroveci:269 S.scrofa:154

L0PDT4              	100.00%		F1SHB1              	100.00%
                    	       		F1RQH2              	46.17%
Bootstrap support for L0PDT4 as seed ortholog is 100%.
Bootstrap support for F1SHB1 as seed ortholog is 99%.

Group of orthologs #515. Best score 269 bits
Score difference with first non-orthologous sequence - P.jiroveci:269 S.scrofa:76

L0PEG2              	100.00%		F1SB38              	100.00%
Bootstrap support for L0PEG2 as seed ortholog is 100%.
Bootstrap support for F1SB38 as seed ortholog is 92%.

Group of orthologs #516. Best score 269 bits
Score difference with first non-orthologous sequence - P.jiroveci:269 S.scrofa:211

L0PBV6              	100.00%		F2Z5N0              	100.00%
Bootstrap support for L0PBV6 as seed ortholog is 100%.
Bootstrap support for F2Z5N0 as seed ortholog is 100%.

Group of orthologs #517. Best score 268 bits
Score difference with first non-orthologous sequence - P.jiroveci:88 S.scrofa:58

L0PDD3              	100.00%		F2Z5C9              	100.00%
                    	       		F1SLG9              	28.07%
Bootstrap support for L0PDD3 as seed ortholog is 99%.
Bootstrap support for F2Z5C9 as seed ortholog is 98%.

Group of orthologs #518. Best score 268 bits
Score difference with first non-orthologous sequence - P.jiroveci:268 S.scrofa:107

L0PBD0              	100.00%		I3LQA5              	100.00%
                    	       		F1RUT9              	26.25%
Bootstrap support for L0PBD0 as seed ortholog is 100%.
Bootstrap support for I3LQA5 as seed ortholog is 93%.

Group of orthologs #519. Best score 268 bits
Score difference with first non-orthologous sequence - P.jiroveci:268 S.scrofa:268

L0PAB3              	100.00%		F1SKB5              	100.00%
Bootstrap support for L0PAB3 as seed ortholog is 100%.
Bootstrap support for F1SKB5 as seed ortholog is 100%.

Group of orthologs #520. Best score 267 bits
Score difference with first non-orthologous sequence - P.jiroveci:267 S.scrofa:104

L0P962              	100.00%		F1SMQ0              	100.00%
Bootstrap support for L0P962 as seed ortholog is 100%.
Bootstrap support for F1SMQ0 as seed ortholog is 98%.

Group of orthologs #521. Best score 266 bits
Score difference with first non-orthologous sequence - P.jiroveci:266 S.scrofa:152

L0PDR6              	100.00%		F1RTK0              	100.00%
                    	       		I3LLE9              	76.63%
Bootstrap support for L0PDR6 as seed ortholog is 100%.
Bootstrap support for F1RTK0 as seed ortholog is 99%.

Group of orthologs #522. Best score 266 bits
Score difference with first non-orthologous sequence - P.jiroveci:266 S.scrofa:266

L0PB61              	100.00%		F1SB54              	100.00%
                    	       		I3LSN5              	32.52%
Bootstrap support for L0PB61 as seed ortholog is 100%.
Bootstrap support for F1SB54 as seed ortholog is 100%.

Group of orthologs #523. Best score 265 bits
Score difference with first non-orthologous sequence - P.jiroveci:265 S.scrofa:102

L0PGD7              	100.00%		F2Z4Z3              	100.00%
L0PGQ0              	54.71%		F1SKP9              	38.55%
Bootstrap support for L0PGD7 as seed ortholog is 100%.
Bootstrap support for F2Z4Z3 as seed ortholog is 99%.

Group of orthologs #524. Best score 265 bits
Score difference with first non-orthologous sequence - P.jiroveci:265 S.scrofa:212

L0P9B8              	100.00%		F1RL85              	100.00%
Bootstrap support for L0P9B8 as seed ortholog is 100%.
Bootstrap support for F1RL85 as seed ortholog is 100%.

Group of orthologs #525. Best score 265 bits
Score difference with first non-orthologous sequence - P.jiroveci:265 S.scrofa:265

L0PB86              	100.00%		F1RRA8              	100.00%
Bootstrap support for L0PB86 as seed ortholog is 100%.
Bootstrap support for F1RRA8 as seed ortholog is 100%.

Group of orthologs #526. Best score 265 bits
Score difference with first non-orthologous sequence - P.jiroveci:265 S.scrofa:265

L0P9W3              	100.00%		F1SSE6              	100.00%
Bootstrap support for L0P9W3 as seed ortholog is 100%.
Bootstrap support for F1SSE6 as seed ortholog is 100%.

Group of orthologs #527. Best score 265 bits
Score difference with first non-orthologous sequence - P.jiroveci:265 S.scrofa:14

L0P9S5              	100.00%		I3LLI8              	100.00%
Bootstrap support for L0P9S5 as seed ortholog is 100%.
Bootstrap support for I3LLI8 as seed ortholog is 71%.
Alternative seed ortholog is F2Z4Z1 (14 bits away from this cluster)

Group of orthologs #528. Best score 263 bits
Score difference with first non-orthologous sequence - P.jiroveci:263 S.scrofa:45

L0PDF9              	100.00%		Q06AS6              	100.00%
                    	       		Q06AS8              	80.62%
                    	       		F1SB90              	65.86%
                    	       		I3LA61              	49.78%
                    	       		F1RLT6              	48.24%
                    	       		F1SB91              	44.49%
                    	       		A4L2Z4              	18.50%
                    	       		Q2PKF4              	16.96%
                    	       		Q2XSV9              	16.52%
                    	       		F1RF18              	15.86%
Bootstrap support for L0PDF9 as seed ortholog is 100%.
Bootstrap support for Q06AS6 as seed ortholog is 89%.

Group of orthologs #529. Best score 262 bits
Score difference with first non-orthologous sequence - P.jiroveci:262 S.scrofa:186

L0PGG0              	100.00%		F1SE04              	100.00%
Bootstrap support for L0PGG0 as seed ortholog is 100%.
Bootstrap support for F1SE04 as seed ortholog is 99%.

Group of orthologs #530. Best score 260 bits
Score difference with first non-orthologous sequence - P.jiroveci:260 S.scrofa:260

L0PG96              	100.00%		I3LT92              	100.00%
Bootstrap support for L0PG96 as seed ortholog is 100%.
Bootstrap support for I3LT92 as seed ortholog is 100%.

Group of orthologs #531. Best score 258 bits
Score difference with first non-orthologous sequence - P.jiroveci:182 S.scrofa:195

L0PF24              	100.00%		F1SLU8              	100.00%
                    	       		I3LSK5              	75.28%
                    	       		F1RZC0              	23.15%
Bootstrap support for L0PF24 as seed ortholog is 100%.
Bootstrap support for F1SLU8 as seed ortholog is 100%.

Group of orthologs #532. Best score 257 bits
Score difference with first non-orthologous sequence - P.jiroveci:257 S.scrofa:257

L0PB11              	100.00%		F1RYU9              	100.00%
Bootstrap support for L0PB11 as seed ortholog is 100%.
Bootstrap support for F1RYU9 as seed ortholog is 100%.

Group of orthologs #533. Best score 257 bits
Score difference with first non-orthologous sequence - P.jiroveci:257 S.scrofa:257

L0PEV9              	100.00%		I3L8I5              	100.00%
Bootstrap support for L0PEV9 as seed ortholog is 100%.
Bootstrap support for I3L8I5 as seed ortholog is 100%.

Group of orthologs #534. Best score 256 bits
Score difference with first non-orthologous sequence - P.jiroveci:256 S.scrofa:256

L0P9F7              	100.00%		Q29387              	100.00%
L0PGP0              	82.56%		
Bootstrap support for L0P9F7 as seed ortholog is 100%.
Bootstrap support for Q29387 as seed ortholog is 100%.

Group of orthologs #535. Best score 255 bits
Score difference with first non-orthologous sequence - P.jiroveci:255 S.scrofa:255

L0PA72              	100.00%		F2Z590              	100.00%
                    	       		F2Z5J3              	36.12%
Bootstrap support for L0PA72 as seed ortholog is 100%.
Bootstrap support for F2Z590 as seed ortholog is 100%.

Group of orthologs #536. Best score 255 bits
Score difference with first non-orthologous sequence - P.jiroveci:255 S.scrofa:118

L0PAM8              	100.00%		F1SQT9              	100.00%
Bootstrap support for L0PAM8 as seed ortholog is 100%.
Bootstrap support for F1SQT9 as seed ortholog is 99%.

Group of orthologs #537. Best score 255 bits
Score difference with first non-orthologous sequence - P.jiroveci:255 S.scrofa:255

L0P9M9              	100.00%		I3LFK0              	100.00%
Bootstrap support for L0P9M9 as seed ortholog is 100%.
Bootstrap support for I3LFK0 as seed ortholog is 100%.

Group of orthologs #538. Best score 255 bits
Score difference with first non-orthologous sequence - P.jiroveci:255 S.scrofa:255

L0PAW2              	100.00%		I3LKI5              	100.00%
Bootstrap support for L0PAW2 as seed ortholog is 100%.
Bootstrap support for I3LKI5 as seed ortholog is 100%.

Group of orthologs #539. Best score 255 bits
Score difference with first non-orthologous sequence - P.jiroveci:192 S.scrofa:177

L0PFY7              	100.00%		P63246              	100.00%
Bootstrap support for L0PFY7 as seed ortholog is 100%.
Bootstrap support for P63246 as seed ortholog is 100%.

Group of orthologs #540. Best score 254 bits
Score difference with first non-orthologous sequence - P.jiroveci:254 S.scrofa:254

L0PCC1              	100.00%		I3LJQ7              	100.00%
                    	       		I3LQS3              	61.41%
Bootstrap support for L0PCC1 as seed ortholog is 100%.
Bootstrap support for I3LJQ7 as seed ortholog is 100%.

Group of orthologs #541. Best score 254 bits
Score difference with first non-orthologous sequence - P.jiroveci:254 S.scrofa:169

L0PFQ3              	100.00%		I3LKU9              	100.00%
                    	       		K7GLH4              	26.32%
Bootstrap support for L0PFQ3 as seed ortholog is 100%.
Bootstrap support for I3LKU9 as seed ortholog is 99%.

Group of orthologs #542. Best score 253 bits
Score difference with first non-orthologous sequence - P.jiroveci:253 S.scrofa:253

L0P9T2              	100.00%		F1SRD8              	100.00%
Bootstrap support for L0P9T2 as seed ortholog is 100%.
Bootstrap support for F1SRD8 as seed ortholog is 100%.

Group of orthologs #543. Best score 253 bits
Score difference with first non-orthologous sequence - P.jiroveci:209 S.scrofa:202

L0P895              	100.00%		F2Z5U3              	100.00%
Bootstrap support for L0P895 as seed ortholog is 100%.
Bootstrap support for F2Z5U3 as seed ortholog is 100%.

Group of orthologs #544. Best score 252 bits
Score difference with first non-orthologous sequence - P.jiroveci:252 S.scrofa:252

L0PEY5              	100.00%		Q06AK6              	100.00%
                    	       		F1RG71              	98.78%
Bootstrap support for L0PEY5 as seed ortholog is 100%.
Bootstrap support for Q06AK6 as seed ortholog is 100%.

Group of orthologs #545. Best score 252 bits
Score difference with first non-orthologous sequence - P.jiroveci:252 S.scrofa:192

L0P949              	100.00%		F1RVF1              	100.00%
Bootstrap support for L0P949 as seed ortholog is 100%.
Bootstrap support for F1RVF1 as seed ortholog is 100%.

Group of orthologs #546. Best score 252 bits
Score difference with first non-orthologous sequence - P.jiroveci:252 S.scrofa:252

L0PG86              	100.00%		F1S2G5              	100.00%
Bootstrap support for L0PG86 as seed ortholog is 100%.
Bootstrap support for F1S2G5 as seed ortholog is 100%.

Group of orthologs #547. Best score 252 bits
Score difference with first non-orthologous sequence - P.jiroveci:252 S.scrofa:252

L0PEN7              	100.00%		F1SJA3              	100.00%
Bootstrap support for L0PEN7 as seed ortholog is 100%.
Bootstrap support for F1SJA3 as seed ortholog is 100%.

Group of orthologs #548. Best score 252 bits
Score difference with first non-orthologous sequence - P.jiroveci:252 S.scrofa:252

L0P914              	100.00%		F2Z5N4              	100.00%
Bootstrap support for L0P914 as seed ortholog is 100%.
Bootstrap support for F2Z5N4 as seed ortholog is 100%.

Group of orthologs #549. Best score 252 bits
Score difference with first non-orthologous sequence - P.jiroveci:252 S.scrofa:252

L0PAM2              	100.00%		Q29205              	100.00%
Bootstrap support for L0PAM2 as seed ortholog is 100%.
Bootstrap support for Q29205 as seed ortholog is 100%.

Group of orthologs #550. Best score 250 bits
Score difference with first non-orthologous sequence - P.jiroveci:250 S.scrofa:250

L0PFX9              	100.00%		I3LK75              	100.00%
                    	       		I3LTJ9              	84.55%
Bootstrap support for L0PFX9 as seed ortholog is 100%.
Bootstrap support for I3LK75 as seed ortholog is 100%.

Group of orthologs #551. Best score 250 bits
Score difference with first non-orthologous sequence - P.jiroveci:250 S.scrofa:250

L0PF44              	100.00%		F1RJJ3              	100.00%
Bootstrap support for L0PF44 as seed ortholog is 100%.
Bootstrap support for F1RJJ3 as seed ortholog is 100%.

Group of orthologs #552. Best score 250 bits
Score difference with first non-orthologous sequence - P.jiroveci:250 S.scrofa:189

L0PAG1              	100.00%		F1RTW8              	100.00%
Bootstrap support for L0PAG1 as seed ortholog is 100%.
Bootstrap support for F1RTW8 as seed ortholog is 100%.

Group of orthologs #553. Best score 250 bits
Score difference with first non-orthologous sequence - P.jiroveci:250 S.scrofa:250

L0PBY9              	100.00%		F1S781              	100.00%
Bootstrap support for L0PBY9 as seed ortholog is 100%.
Bootstrap support for F1S781 as seed ortholog is 100%.

Group of orthologs #554. Best score 249 bits
Score difference with first non-orthologous sequence - P.jiroveci:58 S.scrofa:249

L0PAQ7              	100.00%		P67872              	100.00%
Bootstrap support for L0PAQ7 as seed ortholog is 97%.
Bootstrap support for P67872 as seed ortholog is 100%.

Group of orthologs #555. Best score 249 bits
Score difference with first non-orthologous sequence - P.jiroveci:125 S.scrofa:36

L0PGH8              	100.00%		I3LTN6              	100.00%
Bootstrap support for L0PGH8 as seed ortholog is 99%.
Bootstrap support for I3LTN6 as seed ortholog is 79%.

Group of orthologs #556. Best score 248 bits
Score difference with first non-orthologous sequence - P.jiroveci:159 S.scrofa:61

L0P876              	100.00%		F2Z5P3              	100.00%
                    	       		Q06AA9              	72.73%
                    	       		F1S1P0              	48.48%
Bootstrap support for L0P876 as seed ortholog is 100%.
Bootstrap support for F2Z5P3 as seed ortholog is 99%.

Group of orthologs #557. Best score 248 bits
Score difference with first non-orthologous sequence - P.jiroveci:248 S.scrofa:177

L0PBS3              	100.00%		F1S359              	100.00%
Bootstrap support for L0PBS3 as seed ortholog is 100%.
Bootstrap support for F1S359 as seed ortholog is 99%.

Group of orthologs #558. Best score 248 bits
Score difference with first non-orthologous sequence - P.jiroveci:248 S.scrofa:248

L0PFC0              	100.00%		F2Z5J6              	100.00%
Bootstrap support for L0PFC0 as seed ortholog is 100%.
Bootstrap support for F2Z5J6 as seed ortholog is 100%.

Group of orthologs #559. Best score 248 bits
Score difference with first non-orthologous sequence - P.jiroveci:248 S.scrofa:248

L0PAJ1              	100.00%		I3LVG2              	100.00%
Bootstrap support for L0PAJ1 as seed ortholog is 100%.
Bootstrap support for I3LVG2 as seed ortholog is 100%.

Group of orthologs #560. Best score 247 bits
Score difference with first non-orthologous sequence - P.jiroveci:247 S.scrofa:122

L0PCH0              	100.00%		F1SUF2              	100.00%
                    	       		Q1W674              	74.30%
                    	       		F1SUF3              	70.63%
                    	       		F1S3B7              	48.28%
                    	       		F1SSG0              	20.43%
Bootstrap support for L0PCH0 as seed ortholog is 100%.
Bootstrap support for F1SUF2 as seed ortholog is 99%.

Group of orthologs #561. Best score 247 bits
Score difference with first non-orthologous sequence - P.jiroveci:247 S.scrofa:247

L0PDA9              	100.00%		F1RQF4              	100.00%
Bootstrap support for L0PDA9 as seed ortholog is 100%.
Bootstrap support for F1RQF4 as seed ortholog is 100%.

Group of orthologs #562. Best score 247 bits
Score difference with first non-orthologous sequence - P.jiroveci:247 S.scrofa:247

L0PHK5              	100.00%		I3LIJ8              	100.00%
Bootstrap support for L0PHK5 as seed ortholog is 100%.
Bootstrap support for I3LIJ8 as seed ortholog is 100%.

Group of orthologs #563. Best score 246 bits
Score difference with first non-orthologous sequence - P.jiroveci:246 S.scrofa:246

L0P896              	100.00%		F1RNZ1              	100.00%
Bootstrap support for L0P896 as seed ortholog is 100%.
Bootstrap support for F1RNZ1 as seed ortholog is 100%.

Group of orthologs #564. Best score 246 bits
Score difference with first non-orthologous sequence - P.jiroveci:246 S.scrofa:202

L0PG93              	100.00%		B2CCY7              	100.00%
Bootstrap support for L0PG93 as seed ortholog is 100%.
Bootstrap support for B2CCY7 as seed ortholog is 100%.

Group of orthologs #565. Best score 244 bits
Score difference with first non-orthologous sequence - P.jiroveci:244 S.scrofa:244

L0P8P7              	100.00%		I3LU50              	100.00%
Bootstrap support for L0P8P7 as seed ortholog is 100%.
Bootstrap support for I3LU50 as seed ortholog is 100%.

Group of orthologs #566. Best score 243 bits
Score difference with first non-orthologous sequence - P.jiroveci:243 S.scrofa:243

L0PET8              	100.00%		F1SFN0              	100.00%
Bootstrap support for L0PET8 as seed ortholog is 100%.
Bootstrap support for F1SFN0 as seed ortholog is 100%.

Group of orthologs #567. Best score 243 bits
Score difference with first non-orthologous sequence - P.jiroveci:243 S.scrofa:243

L0PCG1              	100.00%		F1SND3              	100.00%
Bootstrap support for L0PCG1 as seed ortholog is 100%.
Bootstrap support for F1SND3 as seed ortholog is 100%.

Group of orthologs #568. Best score 242 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 S.scrofa:242

L0P7H2              	100.00%		I3LK33              	100.00%
                    	       		P79324              	42.55%
                    	       		I3LS62              	6.91%
Bootstrap support for L0P7H2 as seed ortholog is 100%.
Bootstrap support for I3LK33 as seed ortholog is 100%.

Group of orthologs #569. Best score 242 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 S.scrofa:242

L0PGN2              	100.00%		F1S1J4              	100.00%
                    	       		I3LM52              	52.49%
Bootstrap support for L0PGN2 as seed ortholog is 100%.
Bootstrap support for F1S1J4 as seed ortholog is 100%.

Group of orthologs #570. Best score 242 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 S.scrofa:242

L0PGQ4              	100.00%		F1SAH5              	100.00%
Bootstrap support for L0PGQ4 as seed ortholog is 100%.
Bootstrap support for F1SAH5 as seed ortholog is 100%.

Group of orthologs #571. Best score 242 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 S.scrofa:242

L0PDS2              	100.00%		Q767M2              	100.00%
Bootstrap support for L0PDS2 as seed ortholog is 100%.
Bootstrap support for Q767M2 as seed ortholog is 100%.

Group of orthologs #572. Best score 240 bits
Score difference with first non-orthologous sequence - P.jiroveci:240 S.scrofa:240

L0P8F0              	100.00%		F1S4Y8              	100.00%
Bootstrap support for L0P8F0 as seed ortholog is 100%.
Bootstrap support for F1S4Y8 as seed ortholog is 100%.

Group of orthologs #573. Best score 240 bits
Score difference with first non-orthologous sequence - P.jiroveci:240 S.scrofa:240

L0PA36              	100.00%		F1SQF9              	100.00%
Bootstrap support for L0PA36 as seed ortholog is 100%.
Bootstrap support for F1SQF9 as seed ortholog is 100%.

Group of orthologs #574. Best score 240 bits
Score difference with first non-orthologous sequence - P.jiroveci:240 S.scrofa:106

L0PA42              	100.00%		I3LS96              	100.00%
Bootstrap support for L0PA42 as seed ortholog is 100%.
Bootstrap support for I3LS96 as seed ortholog is 99%.

Group of orthologs #575. Best score 239 bits
Score difference with first non-orthologous sequence - P.jiroveci:239 S.scrofa:239

L0PE74              	100.00%		I3LKW2              	100.00%
Bootstrap support for L0PE74 as seed ortholog is 100%.
Bootstrap support for I3LKW2 as seed ortholog is 100%.

Group of orthologs #576. Best score 239 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 S.scrofa:143

L0P9F9              	100.00%		I3LSZ1              	100.00%
Bootstrap support for L0P9F9 as seed ortholog is 100%.
Bootstrap support for I3LSZ1 as seed ortholog is 100%.

Group of orthologs #577. Best score 238 bits
Score difference with first non-orthologous sequence - P.jiroveci:238 S.scrofa:238

L0PDH2              	100.00%		F1RGB4              	100.00%
Bootstrap support for L0PDH2 as seed ortholog is 100%.
Bootstrap support for F1RGB4 as seed ortholog is 100%.

Group of orthologs #578. Best score 237 bits
Score difference with first non-orthologous sequence - P.jiroveci:237 S.scrofa:237

L0PBZ6              	100.00%		Q6QAS5              	100.00%
                    	       		I3LBH4              	60.96%
                    	       		I3LBL3              	56.85%
                    	       		I3LFQ4              	34.93%
                    	       		F1S1A2              	5.48%
Bootstrap support for L0PBZ6 as seed ortholog is 100%.
Bootstrap support for Q6QAS5 as seed ortholog is 100%.

Group of orthologs #579. Best score 237 bits
Score difference with first non-orthologous sequence - P.jiroveci:163 S.scrofa:145

L0PFE3              	100.00%		F1RLJ5              	100.00%
                    	       		F1SIE6              	44.90%
                    	       		F1S424              	41.17%
                    	       		B1A9K1              	38.56%
Bootstrap support for L0PFE3 as seed ortholog is 99%.
Bootstrap support for F1RLJ5 as seed ortholog is 99%.

Group of orthologs #580. Best score 237 bits
Score difference with first non-orthologous sequence - P.jiroveci:237 S.scrofa:190

L0P6P2              	100.00%		F1SUG3              	100.00%
                    	       		F1S6C2              	29.93%
Bootstrap support for L0P6P2 as seed ortholog is 100%.
Bootstrap support for F1SUG3 as seed ortholog is 100%.

Group of orthologs #581. Best score 237 bits
Score difference with first non-orthologous sequence - P.jiroveci:237 S.scrofa:237

L0PE58              	100.00%		P62272              	100.00%
Bootstrap support for L0PE58 as seed ortholog is 100%.
Bootstrap support for P62272 as seed ortholog is 100%.

Group of orthologs #582. Best score 236 bits
Score difference with first non-orthologous sequence - P.jiroveci:236 S.scrofa:236

L0PBA4              	100.00%		F1SIF2              	100.00%
Bootstrap support for L0PBA4 as seed ortholog is 100%.
Bootstrap support for F1SIF2 as seed ortholog is 100%.

Group of orthologs #583. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:153 S.scrofa:235

L0P834              	100.00%		F1RFL6              	100.00%
Bootstrap support for L0P834 as seed ortholog is 100%.
Bootstrap support for F1RFL6 as seed ortholog is 100%.

Group of orthologs #584. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 S.scrofa:235

L0PAZ5              	100.00%		A7L861              	100.00%
Bootstrap support for L0PAZ5 as seed ortholog is 100%.
Bootstrap support for A7L861 as seed ortholog is 100%.

Group of orthologs #585. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 S.scrofa:235

L0PG68              	100.00%		C3RZ98              	100.00%
Bootstrap support for L0PG68 as seed ortholog is 100%.
Bootstrap support for C3RZ98 as seed ortholog is 100%.

Group of orthologs #586. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 S.scrofa:235

L0PG81              	100.00%		I3LKI8              	100.00%
Bootstrap support for L0PG81 as seed ortholog is 100%.
Bootstrap support for I3LKI8 as seed ortholog is 100%.

Group of orthologs #587. Best score 234 bits
Score difference with first non-orthologous sequence - P.jiroveci:157 S.scrofa:109

L0PA17              	100.00%		I3LJ21              	100.00%
Bootstrap support for L0PA17 as seed ortholog is 100%.
Bootstrap support for I3LJ21 as seed ortholog is 100%.

Group of orthologs #588. Best score 233 bits
Score difference with first non-orthologous sequence - P.jiroveci:233 S.scrofa:233

L0PCX5              	100.00%		I3L9F2              	100.00%
                    	       		I3LI86              	68.86%
Bootstrap support for L0PCX5 as seed ortholog is 100%.
Bootstrap support for I3L9F2 as seed ortholog is 100%.

Group of orthologs #589. Best score 233 bits
Score difference with first non-orthologous sequence - P.jiroveci:233 S.scrofa:233

L0PD38              	100.00%		I3LR09              	100.00%
                    	       		F1S565              	32.54%
Bootstrap support for L0PD38 as seed ortholog is 100%.
Bootstrap support for I3LR09 as seed ortholog is 100%.

Group of orthologs #590. Best score 233 bits
Score difference with first non-orthologous sequence - P.jiroveci:233 S.scrofa:233

L0PFE6              	100.00%		Q4A1L5              	100.00%
                    	       		F1S8N9              	30.31%
Bootstrap support for L0PFE6 as seed ortholog is 100%.
Bootstrap support for Q4A1L5 as seed ortholog is 100%.

Group of orthologs #591. Best score 233 bits
Score difference with first non-orthologous sequence - P.jiroveci:233 S.scrofa:233

L0P7L7              	100.00%		F1RP87              	100.00%
Bootstrap support for L0P7L7 as seed ortholog is 100%.
Bootstrap support for F1RP87 as seed ortholog is 100%.

Group of orthologs #592. Best score 233 bits
Score difference with first non-orthologous sequence - P.jiroveci:233 S.scrofa:151

L0P9I3              	100.00%		F1SI09              	100.00%
Bootstrap support for L0P9I3 as seed ortholog is 100%.
Bootstrap support for F1SI09 as seed ortholog is 100%.

Group of orthologs #593. Best score 233 bits
Score difference with first non-orthologous sequence - P.jiroveci:233 S.scrofa:185

L0P9G1              	100.00%		F1SSL6              	100.00%
Bootstrap support for L0P9G1 as seed ortholog is 100%.
Bootstrap support for F1SSL6 as seed ortholog is 100%.

Group of orthologs #594. Best score 232 bits
Score difference with first non-orthologous sequence - P.jiroveci:232 S.scrofa:2

L0PC75              	100.00%		Q06AT0              	100.00%
                    	       		Q06AT1              	100.00%
                    	       		F2Z561              	82.72%
                    	       		F2Z5V9              	24.69%
Bootstrap support for L0PC75 as seed ortholog is 100%.
Bootstrap support for Q06AT0 as seed ortholog is 50%.
Alternative seed ortholog is F1S0Y2 (2 bits away from this cluster)
Bootstrap support for Q06AT1 as seed ortholog is 46%.
Alternative seed ortholog is F1S0Y2 (2 bits away from this cluster)

Group of orthologs #595. Best score 232 bits
Score difference with first non-orthologous sequence - P.jiroveci:232 S.scrofa:156

L0P858              	100.00%		F1RFF8              	100.00%
L0PDX5              	68.33%		
Bootstrap support for L0P858 as seed ortholog is 100%.
Bootstrap support for F1RFF8 as seed ortholog is 99%.

Group of orthologs #596. Best score 232 bits
Score difference with first non-orthologous sequence - P.jiroveci:232 S.scrofa:232

L0PGD6              	100.00%		F1S8E6              	100.00%
Bootstrap support for L0PGD6 as seed ortholog is 100%.
Bootstrap support for F1S8E6 as seed ortholog is 100%.

Group of orthologs #597. Best score 232 bits
Score difference with first non-orthologous sequence - P.jiroveci:232 S.scrofa:232

L0P8K8              	100.00%		Q32YV9              	100.00%
Bootstrap support for L0P8K8 as seed ortholog is 100%.
Bootstrap support for Q32YV9 as seed ortholog is 100%.

Group of orthologs #598. Best score 231 bits
Score difference with first non-orthologous sequence - P.jiroveci:231 S.scrofa:63

L0PFZ1              	100.00%		F1SGD7              	100.00%
                    	       		F1RYA4              	48.06%
                    	       		F1RPL0              	12.32%
Bootstrap support for L0PFZ1 as seed ortholog is 100%.
Bootstrap support for F1SGD7 as seed ortholog is 92%.

Group of orthologs #599. Best score 231 bits
Score difference with first non-orthologous sequence - P.jiroveci:231 S.scrofa:96

L0PHL1              	100.00%		F2Z512              	100.00%
                    	       		Q6SA96              	96.72%
Bootstrap support for L0PHL1 as seed ortholog is 100%.
Bootstrap support for F2Z512 as seed ortholog is 100%.

Group of orthologs #600. Best score 231 bits
Score difference with first non-orthologous sequence - P.jiroveci:231 S.scrofa:168

L0PEW5              	100.00%		F1RFR2              	100.00%
Bootstrap support for L0PEW5 as seed ortholog is 100%.
Bootstrap support for F1RFR2 as seed ortholog is 100%.

Group of orthologs #601. Best score 231 bits
Score difference with first non-orthologous sequence - P.jiroveci:231 S.scrofa:231

L0PBG0              	100.00%		F1S368              	100.00%
Bootstrap support for L0PBG0 as seed ortholog is 100%.
Bootstrap support for F1S368 as seed ortholog is 100%.

Group of orthologs #602. Best score 231 bits
Score difference with first non-orthologous sequence - P.jiroveci:231 S.scrofa:231

L0PBC7              	100.00%		F1SGX1              	100.00%
Bootstrap support for L0PBC7 as seed ortholog is 100%.
Bootstrap support for F1SGX1 as seed ortholog is 100%.

Group of orthologs #603. Best score 230 bits
Score difference with first non-orthologous sequence - P.jiroveci:230 S.scrofa:230

L0PA86              	100.00%		F1SHD6              	100.00%
                    	       		P29412              	52.91%
Bootstrap support for L0PA86 as seed ortholog is 100%.
Bootstrap support for F1SHD6 as seed ortholog is 100%.

Group of orthologs #604. Best score 230 bits
Score difference with first non-orthologous sequence - P.jiroveci:230 S.scrofa:230

L0P9K2              	100.00%		F1RK61              	100.00%
Bootstrap support for L0P9K2 as seed ortholog is 100%.
Bootstrap support for F1RK61 as seed ortholog is 100%.

Group of orthologs #605. Best score 230 bits
Score difference with first non-orthologous sequence - P.jiroveci:230 S.scrofa:71

L0PEX1              	100.00%		I3LSI3              	100.00%
Bootstrap support for L0PEX1 as seed ortholog is 100%.
Bootstrap support for I3LSI3 as seed ortholog is 98%.

Group of orthologs #606. Best score 230 bits
Score difference with first non-orthologous sequence - P.jiroveci:230 S.scrofa:230

L0PF73              	100.00%		Q29371              	100.00%
Bootstrap support for L0PF73 as seed ortholog is 100%.
Bootstrap support for Q29371 as seed ortholog is 100%.

Group of orthologs #607. Best score 229 bits
Score difference with first non-orthologous sequence - P.jiroveci:229 S.scrofa:52

L0PCG0              	100.00%		F1RWI5              	100.00%
                    	       		F1SQ77              	19.23%
Bootstrap support for L0PCG0 as seed ortholog is 100%.
Bootstrap support for F1RWI5 as seed ortholog is 98%.

Group of orthologs #608. Best score 229 bits
Score difference with first non-orthologous sequence - P.jiroveci:229 S.scrofa:229

L0PH55              	100.00%		F2Z5H7              	100.00%
Bootstrap support for L0PH55 as seed ortholog is 100%.
Bootstrap support for F2Z5H7 as seed ortholog is 100%.

Group of orthologs #609. Best score 229 bits
Score difference with first non-orthologous sequence - P.jiroveci:229 S.scrofa:129

L0PEQ4              	100.00%		I3LCH3              	100.00%
Bootstrap support for L0PEQ4 as seed ortholog is 100%.
Bootstrap support for I3LCH3 as seed ortholog is 99%.

Group of orthologs #610. Best score 228 bits
Score difference with first non-orthologous sequence - P.jiroveci:228 S.scrofa:18

L0P967              	100.00%		I3LEQ5              	100.00%
                    	       		F1SU09              	7.88%
Bootstrap support for L0P967 as seed ortholog is 100%.
Bootstrap support for I3LEQ5 as seed ortholog is 66%.
Alternative seed ortholog is F1RJV1 (18 bits away from this cluster)

Group of orthologs #611. Best score 228 bits
Score difference with first non-orthologous sequence - P.jiroveci:228 S.scrofa:228

L0PDB9              	100.00%		F1SI15              	100.00%
Bootstrap support for L0PDB9 as seed ortholog is 100%.
Bootstrap support for F1SI15 as seed ortholog is 100%.

Group of orthologs #612. Best score 228 bits
Score difference with first non-orthologous sequence - P.jiroveci:228 S.scrofa:228

L0PDI2              	100.00%		F1SKD4              	100.00%
Bootstrap support for L0PDI2 as seed ortholog is 100%.
Bootstrap support for F1SKD4 as seed ortholog is 100%.

Group of orthologs #613. Best score 228 bits
Score difference with first non-orthologous sequence - P.jiroveci:138 S.scrofa:125

L0PFK0              	100.00%		F1SU35              	100.00%
Bootstrap support for L0PFK0 as seed ortholog is 99%.
Bootstrap support for F1SU35 as seed ortholog is 99%.

Group of orthologs #614. Best score 227 bits
Score difference with first non-orthologous sequence - P.jiroveci:227 S.scrofa:227

L0P9G0              	100.00%		Q8SPR7              	100.00%
                    	       		F1SRY6              	41.29%
                    	       		F1RR07              	36.42%
                    	       		I3L7K2              	34.48%
                    	       		I3LA13              	25.28%
                    	       		Q7YRU3              	21.24%
                    	       		I3LCQ7              	21.09%
                    	       		F1SI85              	18.55%
                    	       		F1SDV6              	11.67%
                    	       		F1SBL0              	10.55%
                    	       		F1S475              	8.98%
                    	       		F1SBL1              	8.90%
                    	       		F1SS34              	8.45%
                    	       		F1RQ08              	8.00%
Bootstrap support for L0P9G0 as seed ortholog is 100%.
Bootstrap support for Q8SPR7 as seed ortholog is 100%.

Group of orthologs #615. Best score 227 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 S.scrofa:46

L0PGE5              	100.00%		I3LVS7              	100.00%
                    	       		F2Z5K4              	84.62%
                    	       		Q06AT8              	65.68%
Bootstrap support for L0PGE5 as seed ortholog is 99%.
Bootstrap support for I3LVS7 as seed ortholog is 98%.

Group of orthologs #616. Best score 227 bits
Score difference with first non-orthologous sequence - P.jiroveci:227 S.scrofa:227

L0PBZ1              	100.00%		F1RNW7              	100.00%
Bootstrap support for L0PBZ1 as seed ortholog is 100%.
Bootstrap support for F1RNW7 as seed ortholog is 100%.

Group of orthologs #617. Best score 227 bits
Score difference with first non-orthologous sequence - P.jiroveci:227 S.scrofa:227

L0PEJ3              	100.00%		F1SIH4              	100.00%
Bootstrap support for L0PEJ3 as seed ortholog is 100%.
Bootstrap support for F1SIH4 as seed ortholog is 100%.

Group of orthologs #618. Best score 227 bits
Score difference with first non-orthologous sequence - P.jiroveci:227 S.scrofa:227

L0PEC6              	100.00%		F1SR76              	100.00%
Bootstrap support for L0PEC6 as seed ortholog is 100%.
Bootstrap support for F1SR76 as seed ortholog is 100%.

Group of orthologs #619. Best score 226 bits
Score difference with first non-orthologous sequence - P.jiroveci:226 S.scrofa:226

L0P9L7              	100.00%		F1SBJ3              	100.00%
Bootstrap support for L0P9L7 as seed ortholog is 100%.
Bootstrap support for F1SBJ3 as seed ortholog is 100%.

Group of orthologs #620. Best score 225 bits
Score difference with first non-orthologous sequence - P.jiroveci:225 S.scrofa:101

L0PE21              	100.00%		Q6UGB2              	100.00%
                    	       		D0G7F0              	99.04%
Bootstrap support for L0PE21 as seed ortholog is 100%.
Bootstrap support for Q6UGB2 as seed ortholog is 99%.

Group of orthologs #621. Best score 224 bits
Score difference with first non-orthologous sequence - P.jiroveci:224 S.scrofa:224

L0P9J6              	100.00%		F1S4Y4              	100.00%
L0PH67              	87.14%		
Bootstrap support for L0P9J6 as seed ortholog is 100%.
Bootstrap support for F1S4Y4 as seed ortholog is 100%.

Group of orthologs #622. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 S.scrofa:82

L0P848              	100.00%		D7RA31              	100.00%
L0P867              	89.62%		D7RA30              	40.00%
Bootstrap support for L0P848 as seed ortholog is 100%.
Bootstrap support for D7RA31 as seed ortholog is 97%.

Group of orthologs #623. Best score 222 bits
Score difference with first non-orthologous sequence - P.jiroveci:222 S.scrofa:124

L0PE77              	100.00%		F1RZA0              	100.00%
Bootstrap support for L0PE77 as seed ortholog is 100%.
Bootstrap support for F1RZA0 as seed ortholog is 100%.

Group of orthologs #624. Best score 222 bits
Score difference with first non-orthologous sequence - P.jiroveci:222 S.scrofa:222

L0PG39              	100.00%		F1S2R7              	100.00%
Bootstrap support for L0PG39 as seed ortholog is 100%.
Bootstrap support for F1S2R7 as seed ortholog is 100%.

Group of orthologs #625. Best score 222 bits
Score difference with first non-orthologous sequence - P.jiroveci:222 S.scrofa:222

L0PCJ8              	100.00%		F1SEH8              	100.00%
Bootstrap support for L0PCJ8 as seed ortholog is 100%.
Bootstrap support for F1SEH8 as seed ortholog is 100%.

Group of orthologs #626. Best score 222 bits
Score difference with first non-orthologous sequence - P.jiroveci:222 S.scrofa:222

L0PBT0              	100.00%		I3LPQ4              	100.00%
Bootstrap support for L0PBT0 as seed ortholog is 100%.
Bootstrap support for I3LPQ4 as seed ortholog is 100%.

Group of orthologs #627. Best score 222 bits
Score difference with first non-orthologous sequence - P.jiroveci:222 S.scrofa:222

L0PAE8              	100.00%		P62844              	100.00%
Bootstrap support for L0PAE8 as seed ortholog is 100%.
Bootstrap support for P62844 as seed ortholog is 100%.

Group of orthologs #628. Best score 221 bits
Score difference with first non-orthologous sequence - P.jiroveci:36 S.scrofa:36

L0PFJ7              	100.00%		D2IE28              	100.00%
                    	       		F1S054              	25.08%
Bootstrap support for L0PFJ7 as seed ortholog is 77%.
Bootstrap support for D2IE28 as seed ortholog is 77%.

Group of orthologs #629. Best score 220 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 S.scrofa:99

L0PHW8              	100.00%		Q52NJ1              	100.00%
                    	       		F2Z5J9              	80.00%
                    	       		F1RLQ0              	19.05%
Bootstrap support for L0PHW8 as seed ortholog is 100%.
Bootstrap support for Q52NJ1 as seed ortholog is 100%.

Group of orthologs #630. Best score 220 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 S.scrofa:96

L0PG10              	100.00%		F1RG29              	100.00%
                    	       		I3LTH4              	16.86%
Bootstrap support for L0PG10 as seed ortholog is 96%.
Bootstrap support for F1RG29 as seed ortholog is 97%.

Group of orthologs #631. Best score 220 bits
Score difference with first non-orthologous sequence - P.jiroveci:220 S.scrofa:220

L0PFR9              	100.00%		A2TLM1              	100.00%
Bootstrap support for L0PFR9 as seed ortholog is 100%.
Bootstrap support for A2TLM1 as seed ortholog is 100%.

Group of orthologs #632. Best score 220 bits
Score difference with first non-orthologous sequence - P.jiroveci:220 S.scrofa:220

L0PCU0              	100.00%		F1SJ05              	100.00%
Bootstrap support for L0PCU0 as seed ortholog is 100%.
Bootstrap support for F1SJ05 as seed ortholog is 100%.

Group of orthologs #633. Best score 220 bits
Score difference with first non-orthologous sequence - P.jiroveci:220 S.scrofa:145

L0PAW4              	100.00%		F1SQT3              	100.00%
Bootstrap support for L0PAW4 as seed ortholog is 100%.
Bootstrap support for F1SQT3 as seed ortholog is 100%.

Group of orthologs #634. Best score 219 bits
Score difference with first non-orthologous sequence - P.jiroveci:219 S.scrofa:219

L0P9Q8              	100.00%		F1RMN3              	100.00%
                    	       		F1RXT3              	29.04%
                    	       		F1RY63              	27.30%
Bootstrap support for L0P9Q8 as seed ortholog is 100%.
Bootstrap support for F1RMN3 as seed ortholog is 100%.

Group of orthologs #635. Best score 219 bits
Score difference with first non-orthologous sequence - P.jiroveci:88 S.scrofa:110

L0PDS3              	100.00%		F1S4N2              	100.00%
                    	       		F1SJQ5              	42.43%
                    	       		P83686              	42.18%
Bootstrap support for L0PDS3 as seed ortholog is 99%.
Bootstrap support for F1S4N2 as seed ortholog is 99%.

Group of orthologs #636. Best score 219 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 S.scrofa:85

L0PGL3              	100.00%		I3LBK9              	100.00%
Bootstrap support for L0PGL3 as seed ortholog is 99%.
Bootstrap support for I3LBK9 as seed ortholog is 97%.

Group of orthologs #637. Best score 219 bits
Score difference with first non-orthologous sequence - P.jiroveci:219 S.scrofa:120

L0PGL1              	100.00%		I3LK72              	100.00%
Bootstrap support for L0PGL1 as seed ortholog is 100%.
Bootstrap support for I3LK72 as seed ortholog is 99%.

Group of orthologs #638. Best score 218 bits
Score difference with first non-orthologous sequence - P.jiroveci:218 S.scrofa:218

L0PI61              	100.00%		F1RSJ9              	100.00%
L0PA50              	19.78%		F1SSN0              	50.47%
                    	       		F1SHA1              	37.67%
Bootstrap support for L0PI61 as seed ortholog is 100%.
Bootstrap support for F1RSJ9 as seed ortholog is 100%.

Group of orthologs #639. Best score 218 bits
Score difference with first non-orthologous sequence - P.jiroveci:218 S.scrofa:218

L0PCF4              	100.00%		Q9TUI8              	100.00%
L0P926              	60.46%		
Bootstrap support for L0PCF4 as seed ortholog is 100%.
Bootstrap support for Q9TUI8 as seed ortholog is 100%.

Group of orthologs #640. Best score 218 bits
Score difference with first non-orthologous sequence - P.jiroveci:142 S.scrofa:100

L0PHH9              	100.00%		F1RGQ5              	100.00%
Bootstrap support for L0PHH9 as seed ortholog is 100%.
Bootstrap support for F1RGQ5 as seed ortholog is 100%.

Group of orthologs #641. Best score 218 bits
Score difference with first non-orthologous sequence - P.jiroveci:218 S.scrofa:218

L0PDP2              	100.00%		F1S282              	100.00%
Bootstrap support for L0PDP2 as seed ortholog is 100%.
Bootstrap support for F1S282 as seed ortholog is 100%.

Group of orthologs #642. Best score 217 bits
Score difference with first non-orthologous sequence - P.jiroveci:217 S.scrofa:217

L0PGV2              	100.00%		F1RSA4              	100.00%
L0PG40              	63.16%		
Bootstrap support for L0PGV2 as seed ortholog is 100%.
Bootstrap support for F1RSA4 as seed ortholog is 100%.

Group of orthologs #643. Best score 217 bits
Score difference with first non-orthologous sequence - P.jiroveci:217 S.scrofa:217

L0PDL5              	100.00%		F1SAT6              	100.00%
                    	       		F1RLB6              	74.87%
Bootstrap support for L0PDL5 as seed ortholog is 100%.
Bootstrap support for F1SAT6 as seed ortholog is 100%.

Group of orthologs #644. Best score 217 bits
Score difference with first non-orthologous sequence - P.jiroveci:217 S.scrofa:217

L0PGE7              	100.00%		F1S0X6              	100.00%
Bootstrap support for L0PGE7 as seed ortholog is 100%.
Bootstrap support for F1S0X6 as seed ortholog is 100%.

Group of orthologs #645. Best score 217 bits
Score difference with first non-orthologous sequence - P.jiroveci:217 S.scrofa:217

L0PGY0              	100.00%		I3LT81              	100.00%
Bootstrap support for L0PGY0 as seed ortholog is 100%.
Bootstrap support for I3LT81 as seed ortholog is 100%.

Group of orthologs #646. Best score 216 bits
Score difference with first non-orthologous sequence - P.jiroveci:216 S.scrofa:216

L0PFL8              	100.00%		F2Z5C7              	100.00%
Bootstrap support for L0PFL8 as seed ortholog is 100%.
Bootstrap support for F2Z5C7 as seed ortholog is 100%.

Group of orthologs #647. Best score 215 bits
Score difference with first non-orthologous sequence - P.jiroveci:215 S.scrofa:215

L0PEL2              	100.00%		F1S197              	100.00%
Bootstrap support for L0PEL2 as seed ortholog is 100%.
Bootstrap support for F1S197 as seed ortholog is 100%.

Group of orthologs #648. Best score 214 bits
Score difference with first non-orthologous sequence - P.jiroveci:214 S.scrofa:214

L0PD65              	100.00%		F2Z5M3              	100.00%
Bootstrap support for L0PD65 as seed ortholog is 100%.
Bootstrap support for F2Z5M3 as seed ortholog is 100%.

Group of orthologs #649. Best score 213 bits
Score difference with first non-orthologous sequence - P.jiroveci:213 S.scrofa:213

L0P9U1              	100.00%		F1RGC9              	100.00%
Bootstrap support for L0P9U1 as seed ortholog is 100%.
Bootstrap support for F1RGC9 as seed ortholog is 100%.

Group of orthologs #650. Best score 213 bits
Score difference with first non-orthologous sequence - P.jiroveci:213 S.scrofa:213

L0P9Y7              	100.00%		F6Q2D2              	100.00%
Bootstrap support for L0P9Y7 as seed ortholog is 100%.
Bootstrap support for F6Q2D2 as seed ortholog is 100%.

Group of orthologs #651. Best score 213 bits
Score difference with first non-orthologous sequence - P.jiroveci:213 S.scrofa:213

L0PFU0              	100.00%		I3L944              	100.00%
Bootstrap support for L0PFU0 as seed ortholog is 100%.
Bootstrap support for I3L944 as seed ortholog is 100%.

Group of orthologs #652. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:212 S.scrofa:77

L0PBI4              	100.00%		I3L6P9              	100.00%
                    	       		F1RG41              	14.26%
                    	       		I3LMV8              	11.56%
                    	       		I3LED8              	8.86%
Bootstrap support for L0PBI4 as seed ortholog is 100%.
Bootstrap support for I3L6P9 as seed ortholog is 99%.

Group of orthologs #653. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:212 S.scrofa:89

L0PCI8              	100.00%		I3LR53              	100.00%
                    	       		F1S3S1              	64.58%
                    	       		I3LG57              	30.64%
Bootstrap support for L0PCI8 as seed ortholog is 100%.
Bootstrap support for I3LR53 as seed ortholog is 99%.

Group of orthologs #654. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 S.scrofa:77

L0PFI0              	100.00%		F1RNP6              	100.00%
                    	       		F1RGR1              	37.11%
Bootstrap support for L0PFI0 as seed ortholog is 99%.
Bootstrap support for F1RNP6 as seed ortholog is 93%.

Group of orthologs #655. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:212 S.scrofa:212

L0PAL5              	100.00%		F1S4P7              	100.00%
Bootstrap support for L0PAL5 as seed ortholog is 100%.
Bootstrap support for F1S4P7 as seed ortholog is 100%.

Group of orthologs #656. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:147 S.scrofa:142

L0PDB2              	100.00%		F1SHE8              	100.00%
Bootstrap support for L0PDB2 as seed ortholog is 99%.
Bootstrap support for F1SHE8 as seed ortholog is 99%.

Group of orthologs #657. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:113 S.scrofa:212

L0PDR1              	100.00%		I3LES5              	100.00%
Bootstrap support for L0PDR1 as seed ortholog is 99%.
Bootstrap support for I3LES5 as seed ortholog is 100%.

Group of orthologs #658. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:212 S.scrofa:212

L0PCB3              	100.00%		I3LN44              	100.00%
Bootstrap support for L0PCB3 as seed ortholog is 100%.
Bootstrap support for I3LN44 as seed ortholog is 100%.

Group of orthologs #659. Best score 211 bits
Score difference with first non-orthologous sequence - P.jiroveci:211 S.scrofa:211

L0P910              	100.00%		I3LDY2              	100.00%
Bootstrap support for L0P910 as seed ortholog is 100%.
Bootstrap support for I3LDY2 as seed ortholog is 100%.

Group of orthologs #660. Best score 210 bits
Score difference with first non-orthologous sequence - P.jiroveci:156 S.scrofa:69

L0P8M4              	100.00%		F2Z507              	100.00%
                    	       		F1RG36              	74.19%
                    	       		Q52NJ6              	19.82%
Bootstrap support for L0P8M4 as seed ortholog is 100%.
Bootstrap support for F2Z507 as seed ortholog is 99%.

Group of orthologs #661. Best score 210 bits
Score difference with first non-orthologous sequence - P.jiroveci:210 S.scrofa:70

L0PE53              	100.00%		F1RP40              	100.00%
                    	       		A5A4L7              	35.57%
Bootstrap support for L0PE53 as seed ortholog is 100%.
Bootstrap support for F1RP40 as seed ortholog is 92%.

Group of orthologs #662. Best score 210 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 S.scrofa:87

L0PFN2              	100.00%		F2Z5G3              	100.00%
                    	       		F1S145              	52.87%
Bootstrap support for L0PFN2 as seed ortholog is 100%.
Bootstrap support for F2Z5G3 as seed ortholog is 100%.

Group of orthologs #663. Best score 210 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 S.scrofa:134

L0PAZ8              	100.00%		F1SEX9              	100.00%
Bootstrap support for L0PAZ8 as seed ortholog is 99%.
Bootstrap support for F1SEX9 as seed ortholog is 99%.

Group of orthologs #664. Best score 210 bits
Score difference with first non-orthologous sequence - P.jiroveci:210 S.scrofa:210

L0PC53              	100.00%		F2Z5F5              	100.00%
Bootstrap support for L0PC53 as seed ortholog is 100%.
Bootstrap support for F2Z5F5 as seed ortholog is 100%.

Group of orthologs #665. Best score 208 bits
Score difference with first non-orthologous sequence - P.jiroveci:208 S.scrofa:208

L0PHH2              	100.00%		F1SPI2              	100.00%
Bootstrap support for L0PHH2 as seed ortholog is 100%.
Bootstrap support for F1SPI2 as seed ortholog is 100%.

Group of orthologs #666. Best score 208 bits
Score difference with first non-orthologous sequence - P.jiroveci:208 S.scrofa:208

L0PAQ1              	100.00%		I3LJ73              	100.00%
Bootstrap support for L0PAQ1 as seed ortholog is 100%.
Bootstrap support for I3LJ73 as seed ortholog is 100%.

Group of orthologs #667. Best score 207 bits
Score difference with first non-orthologous sequence - P.jiroveci:207 S.scrofa:207

L0PDJ6              	100.00%		F1SU89              	100.00%
                    	       		F1S0Z5              	26.80%
                    	       		F1RGF7              	11.87%
Bootstrap support for L0PDJ6 as seed ortholog is 100%.
Bootstrap support for F1SU89 as seed ortholog is 100%.

Group of orthologs #668. Best score 207 bits
Score difference with first non-orthologous sequence - P.jiroveci:207 S.scrofa:207

L0PD44              	100.00%		F1SS45              	100.00%
                    	       		F1SDF1              	83.57%
Bootstrap support for L0PD44 as seed ortholog is 100%.
Bootstrap support for F1SS45 as seed ortholog is 100%.

Group of orthologs #669. Best score 207 bits
Score difference with first non-orthologous sequence - P.jiroveci:207 S.scrofa:110

L0PCQ6              	100.00%		F1S5V0              	100.00%
Bootstrap support for L0PCQ6 as seed ortholog is 100%.
Bootstrap support for F1S5V0 as seed ortholog is 99%.

Group of orthologs #670. Best score 207 bits
Score difference with first non-orthologous sequence - P.jiroveci:207 S.scrofa:207

L0PGJ8              	100.00%		F1S0H7              	100.00%
Bootstrap support for L0PGJ8 as seed ortholog is 100%.
Bootstrap support for F1S0H7 as seed ortholog is 100%.

Group of orthologs #671. Best score 206 bits
Score difference with first non-orthologous sequence - P.jiroveci:206 S.scrofa:206

L0P9C4              	100.00%		F1SC85              	100.00%
                    	       		F1SLE9              	16.70%
Bootstrap support for L0P9C4 as seed ortholog is 100%.
Bootstrap support for F1SC85 as seed ortholog is 100%.

Group of orthologs #672. Best score 206 bits
Score difference with first non-orthologous sequence - P.jiroveci:206 S.scrofa:105

L0PF53              	100.00%		F1S7N8              	100.00%
Bootstrap support for L0PF53 as seed ortholog is 100%.
Bootstrap support for F1S7N8 as seed ortholog is 99%.

Group of orthologs #673. Best score 206 bits
Score difference with first non-orthologous sequence - P.jiroveci:206 S.scrofa:206

L0PA65              	100.00%		I3LB48              	100.00%
Bootstrap support for L0PA65 as seed ortholog is 100%.
Bootstrap support for I3LB48 as seed ortholog is 100%.

Group of orthologs #674. Best score 205 bits
Score difference with first non-orthologous sequence - P.jiroveci:205 S.scrofa:131

L0P839              	100.00%		F1RFV5              	100.00%
                    	       		Q2PYM7              	22.86%
Bootstrap support for L0P839 as seed ortholog is 100%.
Bootstrap support for F1RFV5 as seed ortholog is 100%.

Group of orthologs #675. Best score 205 bits
Score difference with first non-orthologous sequence - P.jiroveci:205 S.scrofa:205

L0PFP1              	100.00%		F1S596              	100.00%
L0PC71              	74.07%		
Bootstrap support for L0PFP1 as seed ortholog is 100%.
Bootstrap support for F1S596 as seed ortholog is 100%.

Group of orthologs #676. Best score 205 bits
Score difference with first non-orthologous sequence - P.jiroveci:142 S.scrofa:94

L0PAF0              	100.00%		I3L974              	100.00%
                    	       		I3LL52              	26.09%
Bootstrap support for L0PAF0 as seed ortholog is 99%.
Bootstrap support for I3L974 as seed ortholog is 99%.

Group of orthologs #677. Best score 205 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 S.scrofa:119

L0PDC4              	100.00%		I3LD81              	100.00%
L0PBK4              	5.84%		
Bootstrap support for L0PDC4 as seed ortholog is 98%.
Bootstrap support for I3LD81 as seed ortholog is 99%.

Group of orthologs #678. Best score 205 bits
Score difference with first non-orthologous sequence - P.jiroveci:205 S.scrofa:205

L0PCH6              	100.00%		F1RQV4              	100.00%
Bootstrap support for L0PCH6 as seed ortholog is 100%.
Bootstrap support for F1RQV4 as seed ortholog is 100%.

Group of orthologs #679. Best score 204 bits
Score difference with first non-orthologous sequence - P.jiroveci:204 S.scrofa:204

L0PAA3              	100.00%		F1RRF0              	100.00%
                    	       		I3LEQ0              	24.94%
Bootstrap support for L0PAA3 as seed ortholog is 100%.
Bootstrap support for F1RRF0 as seed ortholog is 100%.

Group of orthologs #680. Best score 204 bits
Score difference with first non-orthologous sequence - P.jiroveci:204 S.scrofa:204

L0PB48              	100.00%		F1RR44              	100.00%
L0PD43              	100.00%		
Bootstrap support for L0PB48 as seed ortholog is 100%.
Bootstrap support for L0PD43 as seed ortholog is 100%.
Bootstrap support for F1RR44 as seed ortholog is 100%.

Group of orthologs #681. Best score 204 bits
Score difference with first non-orthologous sequence - P.jiroveci:204 S.scrofa:204

L0PC18              	100.00%		F2Z546              	100.00%
                    	       		F1SB89              	48.09%
Bootstrap support for L0PC18 as seed ortholog is 100%.
Bootstrap support for F2Z546 as seed ortholog is 100%.

Group of orthologs #682. Best score 204 bits
Score difference with first non-orthologous sequence - P.jiroveci:204 S.scrofa:204

L0PBN7              	100.00%		F1SV45              	100.00%
Bootstrap support for L0PBN7 as seed ortholog is 100%.
Bootstrap support for F1SV45 as seed ortholog is 100%.

Group of orthologs #683. Best score 204 bits
Score difference with first non-orthologous sequence - P.jiroveci:204 S.scrofa:204

L0PGN8              	100.00%		I3L908              	100.00%
Bootstrap support for L0PGN8 as seed ortholog is 100%.
Bootstrap support for I3L908 as seed ortholog is 100%.

Group of orthologs #684. Best score 203 bits
Score difference with first non-orthologous sequence - P.jiroveci:3 S.scrofa:15

L0PCN5              	100.00%		F1S2A7              	100.00%
L0P7B6              	92.68%		F1SQF8              	49.90%
                    	       		F1SF44              	36.96%
                    	       		I3LNH4              	27.10%
                    	       		F1RUP9              	16.02%
                    	       		I3LSE4              	14.58%
Bootstrap support for L0PCN5 as seed ortholog is 53%.
Alternative seed ortholog is L0PGT4 (3 bits away from this cluster)
Bootstrap support for F1S2A7 as seed ortholog is 65%.
Alternative seed ortholog is Q7JFN2 (15 bits away from this cluster)

Group of orthologs #685. Best score 203 bits
Score difference with first non-orthologous sequence - P.jiroveci:203 S.scrofa:203

L0PGT2              	100.00%		I3LRK9              	100.00%
                    	       		I3LLF3              	60.95%
Bootstrap support for L0PGT2 as seed ortholog is 100%.
Bootstrap support for I3LRK9 as seed ortholog is 100%.

Group of orthologs #686. Best score 203 bits
Score difference with first non-orthologous sequence - P.jiroveci:203 S.scrofa:77

L0PAA8              	100.00%		F2Z542              	100.00%
Bootstrap support for L0PAA8 as seed ortholog is 100%.
Bootstrap support for F2Z542 as seed ortholog is 99%.

Group of orthologs #687. Best score 201 bits
Score difference with first non-orthologous sequence - P.jiroveci:201 S.scrofa:76

L0PEI5              	100.00%		I3L7K3              	100.00%
L0P996              	100.00%		I3LCR3              	100.00%
                    	       		I3L7Q5              	69.40%
Bootstrap support for L0PEI5 as seed ortholog is 100%.
Bootstrap support for L0P996 as seed ortholog is 100%.
Bootstrap support for I3L7K3 as seed ortholog is 99%.
Bootstrap support for I3LCR3 as seed ortholog is 99%.

Group of orthologs #688. Best score 201 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 S.scrofa:94

L0P7B1              	100.00%		F1RU99              	100.00%
                    	       		F1SLT9              	100.00%
Bootstrap support for L0P7B1 as seed ortholog is 100%.
Bootstrap support for F1RU99 as seed ortholog is 100%.
Bootstrap support for F1SLT9 as seed ortholog is 99%.

Group of orthologs #689. Best score 201 bits
Score difference with first non-orthologous sequence - P.jiroveci:201 S.scrofa:201

L0PAM3              	100.00%		F1SNQ9              	100.00%
Bootstrap support for L0PAM3 as seed ortholog is 100%.
Bootstrap support for F1SNQ9 as seed ortholog is 100%.

Group of orthologs #690. Best score 200 bits
Score difference with first non-orthologous sequence - P.jiroveci:200 S.scrofa:200

L0PFP0              	100.00%		O02858              	100.00%
                    	       		B0FPB3              	41.16%
Bootstrap support for L0PFP0 as seed ortholog is 100%.
Bootstrap support for O02858 as seed ortholog is 100%.

Group of orthologs #691. Best score 200 bits
Score difference with first non-orthologous sequence - P.jiroveci:200 S.scrofa:200

L0P8J0              	100.00%		F1RFB3              	100.00%
Bootstrap support for L0P8J0 as seed ortholog is 100%.
Bootstrap support for F1RFB3 as seed ortholog is 100%.

Group of orthologs #692. Best score 200 bits
Score difference with first non-orthologous sequence - P.jiroveci:200 S.scrofa:200

L0PAJ0              	100.00%		B6CVD7              	100.00%
Bootstrap support for L0PAJ0 as seed ortholog is 100%.
Bootstrap support for B6CVD7 as seed ortholog is 100%.

Group of orthologs #693. Best score 199 bits
Score difference with first non-orthologous sequence - P.jiroveci:199 S.scrofa:199

L0PAC1              	100.00%		F1S935              	100.00%
Bootstrap support for L0PAC1 as seed ortholog is 100%.
Bootstrap support for F1S935 as seed ortholog is 100%.

Group of orthologs #694. Best score 199 bits
Score difference with first non-orthologous sequence - P.jiroveci:199 S.scrofa:156

L0P9D6              	100.00%		F1SL07              	100.00%
Bootstrap support for L0P9D6 as seed ortholog is 100%.
Bootstrap support for F1SL07 as seed ortholog is 99%.

Group of orthologs #695. Best score 199 bits
Score difference with first non-orthologous sequence - P.jiroveci:199 S.scrofa:199

L0P9I0              	100.00%		F2Z4Y8              	100.00%
Bootstrap support for L0P9I0 as seed ortholog is 100%.
Bootstrap support for F2Z4Y8 as seed ortholog is 100%.

Group of orthologs #696. Best score 199 bits
Score difference with first non-orthologous sequence - P.jiroveci:145 S.scrofa:102

L0P9Z5              	100.00%		I3LT85              	100.00%
Bootstrap support for L0P9Z5 as seed ortholog is 99%.
Bootstrap support for I3LT85 as seed ortholog is 99%.

Group of orthologs #697. Best score 199 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 S.scrofa:37

L0PG51              	100.00%		I3LLG4              	100.00%
Bootstrap support for L0PG51 as seed ortholog is 94%.
Bootstrap support for I3LLG4 as seed ortholog is 82%.

Group of orthologs #698. Best score 198 bits
Score difference with first non-orthologous sequence - P.jiroveci:198 S.scrofa:99

L0PE03              	100.00%		F1S0Z2              	100.00%
                    	       		I3LGC7              	33.81%
Bootstrap support for L0PE03 as seed ortholog is 100%.
Bootstrap support for F1S0Z2 as seed ortholog is 99%.

Group of orthologs #699. Best score 198 bits
Score difference with first non-orthologous sequence - P.jiroveci:198 S.scrofa:198

L0PC62              	100.00%		F1SGF1              	100.00%
Bootstrap support for L0PC62 as seed ortholog is 100%.
Bootstrap support for F1SGF1 as seed ortholog is 100%.

Group of orthologs #700. Best score 198 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 S.scrofa:198

L0PFD8              	100.00%		F1SPR3              	100.00%
Bootstrap support for L0PFD8 as seed ortholog is 97%.
Bootstrap support for F1SPR3 as seed ortholog is 100%.

Group of orthologs #701. Best score 197 bits
Score difference with first non-orthologous sequence - P.jiroveci:137 S.scrofa:69

L0PCC3              	100.00%		F2Z560              	100.00%
                    	       		Q06AU6              	73.93%
                    	       		I3LFZ8              	68.38%
                    	       		I3LR74              	31.20%
Bootstrap support for L0PCC3 as seed ortholog is 99%.
Bootstrap support for F2Z560 as seed ortholog is 99%.

Group of orthologs #702. Best score 197 bits
Score difference with first non-orthologous sequence - P.jiroveci:197 S.scrofa:197

L0PEB2              	100.00%		F1RUW0              	100.00%
Bootstrap support for L0PEB2 as seed ortholog is 100%.
Bootstrap support for F1RUW0 as seed ortholog is 100%.

Group of orthologs #703. Best score 196 bits
Score difference with first non-orthologous sequence - P.jiroveci:196 S.scrofa:35

L0PC02              	100.00%		F1SSZ7              	100.00%
                    	       		I3LMQ5              	43.00%
Bootstrap support for L0PC02 as seed ortholog is 100%.
Bootstrap support for F1SSZ7 as seed ortholog is 67%.
Alternative seed ortholog is O13010 (35 bits away from this cluster)

Group of orthologs #704. Best score 196 bits
Score difference with first non-orthologous sequence - P.jiroveci:196 S.scrofa:196

L0PCK9              	100.00%		I3LPG3              	100.00%
                    	       		F1SNB1              	91.07%
Bootstrap support for L0PCK9 as seed ortholog is 100%.
Bootstrap support for I3LPG3 as seed ortholog is 100%.

Group of orthologs #705. Best score 196 bits
Score difference with first non-orthologous sequence - P.jiroveci:196 S.scrofa:196

L0PFC3              	100.00%		F1RFL7              	100.00%
Bootstrap support for L0PFC3 as seed ortholog is 100%.
Bootstrap support for F1RFL7 as seed ortholog is 100%.

Group of orthologs #706. Best score 195 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 S.scrofa:2

L0P8I7              	100.00%		F1SRI1              	100.00%
                    	       		F1RYC4              	61.01%
Bootstrap support for L0P8I7 as seed ortholog is 100%.
Bootstrap support for F1SRI1 as seed ortholog is 44%.
Alternative seed ortholog is F1SPG0 (2 bits away from this cluster)

Group of orthologs #707. Best score 195 bits
Score difference with first non-orthologous sequence - P.jiroveci:195 S.scrofa:141

L0P919              	100.00%		F1S1S9              	100.00%
Bootstrap support for L0P919 as seed ortholog is 100%.
Bootstrap support for F1S1S9 as seed ortholog is 99%.

Group of orthologs #708. Best score 194 bits
Score difference with first non-orthologous sequence - P.jiroveci:194 S.scrofa:68

L0P8F8              	100.00%		F1SDX1              	100.00%
Bootstrap support for L0P8F8 as seed ortholog is 100%.
Bootstrap support for F1SDX1 as seed ortholog is 99%.

Group of orthologs #709. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 S.scrofa:68

L0PAY4              	100.00%		F1RPL3              	100.00%
                    	       		F2Z5L2              	100.00%
                    	       		F1RPK0              	88.71%
                    	       		F2Z5L5              	83.87%
                    	       		F2Z5L6              	77.42%
                    	       		F1RTQ7              	75.81%
                    	       		I3L7T6              	56.45%
                    	       		F2Z5I4              	43.55%
Bootstrap support for L0PAY4 as seed ortholog is 100%.
Bootstrap support for F1RPL3 as seed ortholog is 99%.
Bootstrap support for F2Z5L2 as seed ortholog is 99%.

Group of orthologs #710. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:193 S.scrofa:193

L0PC20              	100.00%		F1RP70              	100.00%
                    	       		F1RM18              	15.32%
Bootstrap support for L0PC20 as seed ortholog is 100%.
Bootstrap support for F1RP70 as seed ortholog is 100%.

Group of orthologs #711. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:193 S.scrofa:193

L0PGJ6              	100.00%		I3LCK9              	100.00%
                    	       		F1REX3              	95.01%
Bootstrap support for L0PGJ6 as seed ortholog is 100%.
Bootstrap support for I3LCK9 as seed ortholog is 100%.

Group of orthologs #712. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:193 S.scrofa:193

L0PFN0              	100.00%		F1RFR4              	100.00%
Bootstrap support for L0PFN0 as seed ortholog is 100%.
Bootstrap support for F1RFR4 as seed ortholog is 100%.

Group of orthologs #713. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:193 S.scrofa:193

L0PFH3              	100.00%		F1S3I3              	100.00%
Bootstrap support for L0PFH3 as seed ortholog is 100%.
Bootstrap support for F1S3I3 as seed ortholog is 100%.

Group of orthologs #714. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:193 S.scrofa:193

L0PC50              	100.00%		F1SFK5              	100.00%
Bootstrap support for L0PC50 as seed ortholog is 100%.
Bootstrap support for F1SFK5 as seed ortholog is 100%.

Group of orthologs #715. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:193 S.scrofa:150

L0PEJ9              	100.00%		I3LR40              	100.00%
Bootstrap support for L0PEJ9 as seed ortholog is 100%.
Bootstrap support for I3LR40 as seed ortholog is 99%.

Group of orthologs #716. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:193 S.scrofa:193

L0PBM3              	100.00%		Q9TVC1              	100.00%
Bootstrap support for L0PBM3 as seed ortholog is 100%.
Bootstrap support for Q9TVC1 as seed ortholog is 100%.

Group of orthologs #717. Best score 192 bits
Score difference with first non-orthologous sequence - P.jiroveci:138 S.scrofa:41

L0PIS9              	100.00%		F2Z5I8              	100.00%
                    	       		F1S091              	40.81%
                    	       		F2Z5F2              	38.57%
                    	       		I3L5L9              	33.63%
                    	       		Q52NJ2              	16.59%
                    	       		Q06AU7              	11.21%
                    	       		Q06AU3              	8.97%
                    	       		F1S5W6              	7.17%
                    	       		F1SLJ0              	6.73%
                    	       		F2Z570              	5.83%
Bootstrap support for L0PIS9 as seed ortholog is 100%.
Bootstrap support for F2Z5I8 as seed ortholog is 89%.

Group of orthologs #718. Best score 192 bits
Score difference with first non-orthologous sequence - P.jiroveci:97 S.scrofa:52

L0PGT3              	100.00%		F1RQS8              	100.00%
                    	       		Q52NJ4              	6.70%
Bootstrap support for L0PGT3 as seed ortholog is 99%.
Bootstrap support for F1RQS8 as seed ortholog is 99%.

Group of orthologs #719. Best score 192 bits
Score difference with first non-orthologous sequence - P.jiroveci:192 S.scrofa:64

L0PFQ4              	100.00%		F2Z5T7              	100.00%
Bootstrap support for L0PFQ4 as seed ortholog is 100%.
Bootstrap support for F2Z5T7 as seed ortholog is 99%.

Group of orthologs #720. Best score 191 bits
Score difference with first non-orthologous sequence - P.jiroveci:191 S.scrofa:119

L0PD33              	100.00%		F1S0A3              	100.00%
                    	       		I3LJ78              	68.50%
                    	       		I3LS12              	54.88%
Bootstrap support for L0PD33 as seed ortholog is 100%.
Bootstrap support for F1S0A3 as seed ortholog is 99%.

Group of orthologs #721. Best score 191 bits
Score difference with first non-orthologous sequence - P.jiroveci:100 S.scrofa:112

L0PEH9              	100.00%		F1S1T6              	100.00%
Bootstrap support for L0PEH9 as seed ortholog is 99%.
Bootstrap support for F1S1T6 as seed ortholog is 99%.

Group of orthologs #722. Best score 191 bits
Score difference with first non-orthologous sequence - P.jiroveci:191 S.scrofa:191

L0P9Z4              	100.00%		F1SS81              	100.00%
Bootstrap support for L0P9Z4 as seed ortholog is 100%.
Bootstrap support for F1SS81 as seed ortholog is 100%.

Group of orthologs #723. Best score 191 bits
Score difference with first non-orthologous sequence - P.jiroveci:191 S.scrofa:139

L0PGX9              	100.00%		I3LAB6              	100.00%
Bootstrap support for L0PGX9 as seed ortholog is 100%.
Bootstrap support for I3LAB6 as seed ortholog is 99%.

Group of orthologs #724. Best score 191 bits
Score difference with first non-orthologous sequence - P.jiroveci:191 S.scrofa:100

L0PF75              	100.00%		I3LPH6              	100.00%
Bootstrap support for L0PF75 as seed ortholog is 100%.
Bootstrap support for I3LPH6 as seed ortholog is 99%.

Group of orthologs #725. Best score 190 bits
Score difference with first non-orthologous sequence - P.jiroveci:190 S.scrofa:136

L0PAJ6              	100.00%		F1STR6              	100.00%
Bootstrap support for L0PAJ6 as seed ortholog is 100%.
Bootstrap support for F1STR6 as seed ortholog is 100%.

Group of orthologs #726. Best score 189 bits
Score difference with first non-orthologous sequence - P.jiroveci:189 S.scrofa:189

L0PBL8              	100.00%		F1SH64              	100.00%
L0PDU3              	68.35%		
Bootstrap support for L0PBL8 as seed ortholog is 100%.
Bootstrap support for F1SH64 as seed ortholog is 100%.

Group of orthologs #727. Best score 189 bits
Score difference with first non-orthologous sequence - P.jiroveci:189 S.scrofa:109

L0PDE4              	100.00%		F1RL23              	100.00%
Bootstrap support for L0PDE4 as seed ortholog is 100%.
Bootstrap support for F1RL23 as seed ortholog is 99%.

Group of orthologs #728. Best score 189 bits
Score difference with first non-orthologous sequence - P.jiroveci:189 S.scrofa:189

L0PBD5              	100.00%		I3LN50              	100.00%
Bootstrap support for L0PBD5 as seed ortholog is 100%.
Bootstrap support for I3LN50 as seed ortholog is 100%.

Group of orthologs #729. Best score 188 bits
Score difference with first non-orthologous sequence - P.jiroveci:188 S.scrofa:188

L0PBL3              	100.00%		F1SSN2              	100.00%
                    	       		Q09138              	60.65%
                    	       		Q9MYP4              	47.61%
                    	       		I3L9V9              	31.96%
Bootstrap support for L0PBL3 as seed ortholog is 100%.
Bootstrap support for F1SSN2 as seed ortholog is 100%.

Group of orthologs #730. Best score 188 bits
Score difference with first non-orthologous sequence - P.jiroveci:188 S.scrofa:80

L0PBX9              	100.00%		F1RUD3              	100.00%
Bootstrap support for L0PBX9 as seed ortholog is 100%.
Bootstrap support for F1RUD3 as seed ortholog is 94%.

Group of orthologs #731. Best score 187 bits
Score difference with first non-orthologous sequence - P.jiroveci:187 S.scrofa:132

L0PDN9              	100.00%		F1SD01              	100.00%
                    	       		I3LE23              	59.04%
Bootstrap support for L0PDN9 as seed ortholog is 100%.
Bootstrap support for F1SD01 as seed ortholog is 100%.

Group of orthologs #732. Best score 187 bits
Score difference with first non-orthologous sequence - P.jiroveci:187 S.scrofa:187

L0P740              	100.00%		F1SQA3              	100.00%
Bootstrap support for L0P740 as seed ortholog is 100%.
Bootstrap support for F1SQA3 as seed ortholog is 100%.

Group of orthologs #733. Best score 187 bits
Score difference with first non-orthologous sequence - P.jiroveci:187 S.scrofa:187

L0PHL0              	100.00%		I3LHU9              	100.00%
Bootstrap support for L0PHL0 as seed ortholog is 100%.
Bootstrap support for I3LHU9 as seed ortholog is 100%.

Group of orthologs #734. Best score 186 bits
Score difference with first non-orthologous sequence - P.jiroveci:186 S.scrofa:186

L0PFK7              	100.00%		F1SCX8              	100.00%
                    	       		F1S8C7              	41.45%
                    	       		F1RR90              	39.29%
Bootstrap support for L0PFK7 as seed ortholog is 100%.
Bootstrap support for F1SCX8 as seed ortholog is 100%.

Group of orthologs #735. Best score 186 bits
Score difference with first non-orthologous sequence - P.jiroveci:186 S.scrofa:186

L0PE09              	100.00%		Q0PIT9              	100.00%
                    	       		F1S2Y1              	15.14%
                    	       		F1S6Q2              	11.41%
Bootstrap support for L0PE09 as seed ortholog is 100%.
Bootstrap support for Q0PIT9 as seed ortholog is 100%.

Group of orthologs #736. Best score 186 bits
Score difference with first non-orthologous sequence - P.jiroveci:186 S.scrofa:134

L0PBL5              	100.00%		F1RFA5              	100.00%
Bootstrap support for L0PBL5 as seed ortholog is 100%.
Bootstrap support for F1RFA5 as seed ortholog is 99%.

Group of orthologs #737. Best score 186 bits
Score difference with first non-orthologous sequence - P.jiroveci:186 S.scrofa:186

L0PCV5              	100.00%		F1RSH4              	100.00%
Bootstrap support for L0PCV5 as seed ortholog is 100%.
Bootstrap support for F1RSH4 as seed ortholog is 100%.

Group of orthologs #738. Best score 186 bits
Score difference with first non-orthologous sequence - P.jiroveci:186 S.scrofa:186

L0P9N2              	100.00%		F1SS01              	100.00%
Bootstrap support for L0P9N2 as seed ortholog is 100%.
Bootstrap support for F1SS01 as seed ortholog is 100%.

Group of orthologs #739. Best score 186 bits
Score difference with first non-orthologous sequence - P.jiroveci:186 S.scrofa:186

L0PG84              	100.00%		F1SUQ2              	100.00%
Bootstrap support for L0PG84 as seed ortholog is 100%.
Bootstrap support for F1SUQ2 as seed ortholog is 100%.

Group of orthologs #740. Best score 185 bits
Score difference with first non-orthologous sequence - P.jiroveci:185 S.scrofa:51

L0PAP9              	100.00%		K7GMZ5              	100.00%
                    	       		I3LVB8              	75.97%
                    	       		I3L9F4              	36.43%
Bootstrap support for L0PAP9 as seed ortholog is 100%.
Bootstrap support for K7GMZ5 as seed ortholog is 99%.

Group of orthologs #741. Best score 185 bits
Score difference with first non-orthologous sequence - P.jiroveci:185 S.scrofa:185

L0PE05              	100.00%		F1RSN2              	100.00%
                    	       		F1RSK8              	60.57%
Bootstrap support for L0PE05 as seed ortholog is 100%.
Bootstrap support for F1RSN2 as seed ortholog is 100%.

Group of orthologs #742. Best score 185 bits
Score difference with first non-orthologous sequence - P.jiroveci:185 S.scrofa:185

L0PGW6              	100.00%		F1S7X5              	100.00%
                    	       		F1RJ87              	24.69%
Bootstrap support for L0PGW6 as seed ortholog is 100%.
Bootstrap support for F1S7X5 as seed ortholog is 100%.

Group of orthologs #743. Best score 185 bits
Score difference with first non-orthologous sequence - P.jiroveci:185 S.scrofa:63

L0PGN9              	100.00%		I3L988              	100.00%
                    	       		F1SRY9              	47.16%
Bootstrap support for L0PGN9 as seed ortholog is 100%.
Bootstrap support for I3L988 as seed ortholog is 92%.

Group of orthologs #744. Best score 185 bits
Score difference with first non-orthologous sequence - P.jiroveci:185 S.scrofa:92

L0PA07              	100.00%		F1S9B6              	100.00%
Bootstrap support for L0PA07 as seed ortholog is 100%.
Bootstrap support for F1S9B6 as seed ortholog is 99%.

Group of orthologs #745. Best score 185 bits
Score difference with first non-orthologous sequence - P.jiroveci:185 S.scrofa:29

L0PDB8              	100.00%		I3L6I7              	100.00%
Bootstrap support for L0PDB8 as seed ortholog is 100%.
Bootstrap support for I3L6I7 as seed ortholog is 82%.

Group of orthologs #746. Best score 185 bits
Score difference with first non-orthologous sequence - P.jiroveci:185 S.scrofa:185

L0PC96              	100.00%		I3LSD3              	100.00%
Bootstrap support for L0PC96 as seed ortholog is 100%.
Bootstrap support for I3LSD3 as seed ortholog is 100%.

Group of orthologs #747. Best score 183 bits
Score difference with first non-orthologous sequence - P.jiroveci:183 S.scrofa:105

L0PFZ6              	100.00%		F1RLP0              	100.00%
L0P7L2              	96.04%		
Bootstrap support for L0PFZ6 as seed ortholog is 100%.
Bootstrap support for F1RLP0 as seed ortholog is 99%.

Group of orthologs #748. Best score 183 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 S.scrofa:59

L0PAS2              	100.00%		F1SQ14              	100.00%
Bootstrap support for L0PAS2 as seed ortholog is 100%.
Bootstrap support for F1SQ14 as seed ortholog is 99%.

Group of orthologs #749. Best score 183 bits
Score difference with first non-orthologous sequence - P.jiroveci:183 S.scrofa:183

L0PC80              	100.00%		F1SSG1              	100.00%
Bootstrap support for L0PC80 as seed ortholog is 100%.
Bootstrap support for F1SSG1 as seed ortholog is 100%.

Group of orthologs #750. Best score 182 bits
Score difference with first non-orthologous sequence - P.jiroveci:182 S.scrofa:56

L0PC81              	100.00%		F1SKK1              	100.00%
Bootstrap support for L0PC81 as seed ortholog is 100%.
Bootstrap support for F1SKK1 as seed ortholog is 92%.

Group of orthologs #751. Best score 181 bits
Score difference with first non-orthologous sequence - P.jiroveci:181 S.scrofa:181

L0PEB9              	100.00%		F1S084              	100.00%
L0PA79              	57.66%		
Bootstrap support for L0PEB9 as seed ortholog is 100%.
Bootstrap support for F1S084 as seed ortholog is 100%.

Group of orthologs #752. Best score 181 bits
Score difference with first non-orthologous sequence - P.jiroveci:181 S.scrofa:181

L0PB62              	100.00%		F1RS48              	100.00%
Bootstrap support for L0PB62 as seed ortholog is 100%.
Bootstrap support for F1RS48 as seed ortholog is 100%.

Group of orthologs #753. Best score 181 bits
Score difference with first non-orthologous sequence - P.jiroveci:181 S.scrofa:97

L0P746              	100.00%		F1S194              	100.00%
Bootstrap support for L0P746 as seed ortholog is 100%.
Bootstrap support for F1S194 as seed ortholog is 99%.

Group of orthologs #754. Best score 181 bits
Score difference with first non-orthologous sequence - P.jiroveci:181 S.scrofa:181

L0PCE0              	100.00%		F1SMK2              	100.00%
Bootstrap support for L0PCE0 as seed ortholog is 100%.
Bootstrap support for F1SMK2 as seed ortholog is 100%.

Group of orthologs #755. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 S.scrofa:180

L0PBJ0              	100.00%		F1RX51              	100.00%
                    	       		K7GS62              	84.02%
Bootstrap support for L0PBJ0 as seed ortholog is 100%.
Bootstrap support for F1RX51 as seed ortholog is 100%.

Group of orthologs #756. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 S.scrofa:180

L0PBB0              	100.00%		F1SH97              	100.00%
                    	       		K7GPE3              	10.12%
Bootstrap support for L0PBB0 as seed ortholog is 100%.
Bootstrap support for F1SH97 as seed ortholog is 100%.

Group of orthologs #757. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 S.scrofa:180

L0PDW5              	100.00%		I3LA87              	100.00%
                    	       		I3LR64              	100.00%
Bootstrap support for L0PDW5 as seed ortholog is 100%.
Bootstrap support for I3LA87 as seed ortholog is 100%.
Bootstrap support for I3LR64 as seed ortholog is 100%.

Group of orthologs #758. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 S.scrofa:180

L0PEA1              	100.00%		F1RT46              	100.00%
Bootstrap support for L0PEA1 as seed ortholog is 100%.
Bootstrap support for F1RT46 as seed ortholog is 100%.

Group of orthologs #759. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 S.scrofa:180

L0PC06              	100.00%		F1SBT2              	100.00%
Bootstrap support for L0PC06 as seed ortholog is 100%.
Bootstrap support for F1SBT2 as seed ortholog is 100%.

Group of orthologs #760. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 S.scrofa:180

L0PBE8              	100.00%		F1SSS5              	100.00%
Bootstrap support for L0PBE8 as seed ortholog is 100%.
Bootstrap support for F1SSS5 as seed ortholog is 100%.

Group of orthologs #761. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 S.scrofa:29

L0PAV2              	100.00%		I3LB68              	100.00%
Bootstrap support for L0PAV2 as seed ortholog is 100%.
Bootstrap support for I3LB68 as seed ortholog is 79%.

Group of orthologs #762. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 S.scrofa:2

L0P8Q5              	100.00%		I3LTB2              	100.00%
Bootstrap support for L0P8Q5 as seed ortholog is 100%.
Bootstrap support for I3LTB2 as seed ortholog is 50%.
Alternative seed ortholog is F1S1A3 (2 bits away from this cluster)

Group of orthologs #763. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 S.scrofa:180

L0PEK7              	100.00%		Q9GMB0              	100.00%
Bootstrap support for L0PEK7 as seed ortholog is 100%.
Bootstrap support for Q9GMB0 as seed ortholog is 100%.

Group of orthologs #764. Best score 179 bits
Score difference with first non-orthologous sequence - P.jiroveci:179 S.scrofa:40

L0PCY2              	100.00%		F1S9K7              	100.00%
Bootstrap support for L0PCY2 as seed ortholog is 100%.
Bootstrap support for F1S9K7 as seed ortholog is 92%.

Group of orthologs #765. Best score 178 bits
Score difference with first non-orthologous sequence - P.jiroveci:178 S.scrofa:178

L0PCF8              	100.00%		F1S3E2              	100.00%
                    	       		F1SVD4              	100.00%
Bootstrap support for L0PCF8 as seed ortholog is 100%.
Bootstrap support for F1S3E2 as seed ortholog is 100%.
Bootstrap support for F1SVD4 as seed ortholog is 100%.

Group of orthologs #766. Best score 177 bits
Score difference with first non-orthologous sequence - P.jiroveci:177 S.scrofa:177

L0PB31              	100.00%		F1SR83              	100.00%
Bootstrap support for L0PB31 as seed ortholog is 100%.
Bootstrap support for F1SR83 as seed ortholog is 100%.

Group of orthologs #767. Best score 176 bits
Score difference with first non-orthologous sequence - P.jiroveci:176 S.scrofa:8

L0PH33              	100.00%		F1SM37              	100.00%
                    	       		F1RXD3              	19.87%
                    	       		I3LG84              	16.99%
                    	       		I3LTD6              	15.59%
Bootstrap support for L0PH33 as seed ortholog is 100%.
Bootstrap support for F1SM37 as seed ortholog is 50%.
Alternative seed ortholog is F1RFK1 (8 bits away from this cluster)

Group of orthologs #768. Best score 176 bits
Score difference with first non-orthologous sequence - P.jiroveci:176 S.scrofa:55

L0PEN4              	100.00%		F1S3R3              	100.00%
                    	       		F1SBG4              	15.89%
Bootstrap support for L0PEN4 as seed ortholog is 100%.
Bootstrap support for F1S3R3 as seed ortholog is 66%.
Alternative seed ortholog is F1RIH9 (55 bits away from this cluster)

Group of orthologs #769. Best score 176 bits
Score difference with first non-orthologous sequence - P.jiroveci:176 S.scrofa:176

L0PHT7              	100.00%		F1SRU8              	100.00%
                    	       		F1SKZ4              	14.01%
Bootstrap support for L0PHT7 as seed ortholog is 100%.
Bootstrap support for F1SRU8 as seed ortholog is 100%.

Group of orthologs #770. Best score 176 bits
Score difference with first non-orthologous sequence - P.jiroveci:176 S.scrofa:176

L0P8J4              	100.00%		F1S9Z2              	100.00%
Bootstrap support for L0P8J4 as seed ortholog is 100%.
Bootstrap support for F1S9Z2 as seed ortholog is 100%.

Group of orthologs #771. Best score 175 bits
Score difference with first non-orthologous sequence - P.jiroveci:175 S.scrofa:175

L0PGR5              	100.00%		F1RRD6              	100.00%
Bootstrap support for L0PGR5 as seed ortholog is 100%.
Bootstrap support for F1RRD6 as seed ortholog is 100%.

Group of orthologs #772. Best score 175 bits
Score difference with first non-orthologous sequence - P.jiroveci:175 S.scrofa:175

L0PC68              	100.00%		F1S396              	100.00%
Bootstrap support for L0PC68 as seed ortholog is 100%.
Bootstrap support for F1S396 as seed ortholog is 100%.

Group of orthologs #773. Best score 175 bits
Score difference with first non-orthologous sequence - P.jiroveci:175 S.scrofa:175

L0PBG5              	100.00%		I3L895              	100.00%
Bootstrap support for L0PBG5 as seed ortholog is 100%.
Bootstrap support for I3L895 as seed ortholog is 100%.

Group of orthologs #774. Best score 175 bits
Score difference with first non-orthologous sequence - P.jiroveci:175 S.scrofa:175

L0PHR2              	100.00%		I3LQU1              	100.00%
Bootstrap support for L0PHR2 as seed ortholog is 100%.
Bootstrap support for I3LQU1 as seed ortholog is 100%.

Group of orthologs #775. Best score 174 bits
Score difference with first non-orthologous sequence - P.jiroveci:174 S.scrofa:174

L0PGZ5              	100.00%		Q29201              	100.00%
                    	       		F1SP46              	90.60%
                    	       		F1SEG5              	87.18%
Bootstrap support for L0PGZ5 as seed ortholog is 100%.
Bootstrap support for Q29201 as seed ortholog is 100%.

Group of orthologs #776. Best score 174 bits
Score difference with first non-orthologous sequence - P.jiroveci:174 S.scrofa:110

L0PB81              	100.00%		F1RGC0              	100.00%
                    	       		I3LK51              	80.58%
Bootstrap support for L0PB81 as seed ortholog is 100%.
Bootstrap support for F1RGC0 as seed ortholog is 100%.

Group of orthologs #777. Best score 174 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 S.scrofa:174

L0PA05              	100.00%		I3LP14              	100.00%
Bootstrap support for L0PA05 as seed ortholog is 97%.
Bootstrap support for I3LP14 as seed ortholog is 100%.

Group of orthologs #778. Best score 173 bits
Score difference with first non-orthologous sequence - P.jiroveci:173 S.scrofa:119

L0PC70              	100.00%		F2Z5Q9              	100.00%
                    	       		I3LIU9              	84.67%
                    	       		F1RXK2              	30.67%
Bootstrap support for L0PC70 as seed ortholog is 100%.
Bootstrap support for F2Z5Q9 as seed ortholog is 100%.

Group of orthologs #779. Best score 173 bits
Score difference with first non-orthologous sequence - P.jiroveci:173 S.scrofa:173

L0P7L9              	100.00%		F1RHG3              	100.00%
                    	       		F1RHG4              	79.65%
Bootstrap support for L0P7L9 as seed ortholog is 100%.
Bootstrap support for F1RHG3 as seed ortholog is 100%.

Group of orthologs #780. Best score 173 bits
Score difference with first non-orthologous sequence - P.jiroveci:173 S.scrofa:173

L0PA28              	100.00%		F1S0S9              	100.00%
                    	       		I3LUY3              	100.00%
Bootstrap support for L0PA28 as seed ortholog is 100%.
Bootstrap support for F1S0S9 as seed ortholog is 100%.
Bootstrap support for I3LUY3 as seed ortholog is 100%.

Group of orthologs #781. Best score 173 bits
Score difference with first non-orthologous sequence - P.jiroveci:173 S.scrofa:102

L0PBU8              	100.00%		B6V6V4              	100.00%
Bootstrap support for L0PBU8 as seed ortholog is 100%.
Bootstrap support for B6V6V4 as seed ortholog is 88%.

Group of orthologs #782. Best score 173 bits
Score difference with first non-orthologous sequence - P.jiroveci:173 S.scrofa:173

L0PD76              	100.00%		F1RJA7              	100.00%
Bootstrap support for L0PD76 as seed ortholog is 100%.
Bootstrap support for F1RJA7 as seed ortholog is 100%.

Group of orthologs #783. Best score 173 bits
Score difference with first non-orthologous sequence - P.jiroveci:173 S.scrofa:173

L0P9Q6              	100.00%		F1RU20              	100.00%
Bootstrap support for L0P9Q6 as seed ortholog is 100%.
Bootstrap support for F1RU20 as seed ortholog is 100%.

Group of orthologs #784. Best score 173 bits
Score difference with first non-orthologous sequence - P.jiroveci:173 S.scrofa:173

L0PBL9              	100.00%		F1RXE3              	100.00%
Bootstrap support for L0PBL9 as seed ortholog is 100%.
Bootstrap support for F1RXE3 as seed ortholog is 100%.

Group of orthologs #785. Best score 173 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 S.scrofa:94

L0PAQ4              	100.00%		F1S2U5              	100.00%
Bootstrap support for L0PAQ4 as seed ortholog is 96%.
Bootstrap support for F1S2U5 as seed ortholog is 99%.

Group of orthologs #786. Best score 173 bits
Score difference with first non-orthologous sequence - P.jiroveci:173 S.scrofa:118

L0PFW7              	100.00%		F2Z5L8              	100.00%
Bootstrap support for L0PFW7 as seed ortholog is 100%.
Bootstrap support for F2Z5L8 as seed ortholog is 100%.

Group of orthologs #787. Best score 173 bits
Score difference with first non-orthologous sequence - P.jiroveci:173 S.scrofa:173

L0P701              	100.00%		I3LJT9              	100.00%
Bootstrap support for L0P701 as seed ortholog is 100%.
Bootstrap support for I3LJT9 as seed ortholog is 100%.

Group of orthologs #788. Best score 173 bits
Score difference with first non-orthologous sequence - P.jiroveci:173 S.scrofa:173

L0PBU7              	100.00%		I3LK87              	100.00%
Bootstrap support for L0PBU7 as seed ortholog is 100%.
Bootstrap support for I3LK87 as seed ortholog is 100%.

Group of orthologs #789. Best score 172 bits
Score difference with first non-orthologous sequence - P.jiroveci:127 S.scrofa:56

L0PDG6              	100.00%		C8C419              	100.00%
Bootstrap support for L0PDG6 as seed ortholog is 99%.
Bootstrap support for C8C419 as seed ortholog is 93%.

Group of orthologs #790. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 S.scrofa:171

L0PE37              	100.00%		F1RHM8              	100.00%
Bootstrap support for L0PE37 as seed ortholog is 100%.
Bootstrap support for F1RHM8 as seed ortholog is 100%.

Group of orthologs #791. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 S.scrofa:171

L0P8D5              	100.00%		F1RTR7              	100.00%
Bootstrap support for L0P8D5 as seed ortholog is 100%.
Bootstrap support for F1RTR7 as seed ortholog is 100%.

Group of orthologs #792. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 S.scrofa:39

L0PBS7              	100.00%		F1RTJ7              	100.00%
Bootstrap support for L0PBS7 as seed ortholog is 100%.
Bootstrap support for F1RTJ7 as seed ortholog is 82%.

Group of orthologs #793. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 S.scrofa:171

L0PA27              	100.00%		F1SQC6              	100.00%
Bootstrap support for L0PA27 as seed ortholog is 100%.
Bootstrap support for F1SQC6 as seed ortholog is 100%.

Group of orthologs #794. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 S.scrofa:171

L0PE43              	100.00%		F1STJ3              	100.00%
Bootstrap support for L0PE43 as seed ortholog is 100%.
Bootstrap support for F1STJ3 as seed ortholog is 100%.

Group of orthologs #795. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 S.scrofa:171

L0PEW3              	100.00%		I3LQF3              	100.00%
Bootstrap support for L0PEW3 as seed ortholog is 100%.
Bootstrap support for I3LQF3 as seed ortholog is 100%.

Group of orthologs #796. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 S.scrofa:171

L0PA48              	100.00%		O46560              	100.00%
Bootstrap support for L0PA48 as seed ortholog is 100%.
Bootstrap support for O46560 as seed ortholog is 100%.

Group of orthologs #797. Best score 170 bits
Score difference with first non-orthologous sequence - P.jiroveci:170 S.scrofa:170

L0PFG0              	100.00%		Q29221              	100.00%
                    	       		F6Q4Y6              	52.17%
                    	       		F1SQZ1              	6.52%
Bootstrap support for L0PFG0 as seed ortholog is 100%.
Bootstrap support for Q29221 as seed ortholog is 100%.

Group of orthologs #798. Best score 170 bits
Score difference with first non-orthologous sequence - P.jiroveci:69 S.scrofa:19

L0PGM0              	100.00%		I3L9B0              	100.00%
                    	       		I3LV31              	60.80%
Bootstrap support for L0PGM0 as seed ortholog is 99%.
Bootstrap support for I3L9B0 as seed ortholog is 78%.

Group of orthologs #799. Best score 169 bits
Score difference with first non-orthologous sequence - P.jiroveci:169 S.scrofa:120

L0PD40              	100.00%		F2Z564              	100.00%
Bootstrap support for L0PD40 as seed ortholog is 100%.
Bootstrap support for F2Z564 as seed ortholog is 99%.

Group of orthologs #800. Best score 169 bits
Score difference with first non-orthologous sequence - P.jiroveci:169 S.scrofa:169

L0PDB7              	100.00%		I3LHX1              	100.00%
Bootstrap support for L0PDB7 as seed ortholog is 100%.
Bootstrap support for I3LHX1 as seed ortholog is 100%.

Group of orthologs #801. Best score 168 bits
Score difference with first non-orthologous sequence - P.jiroveci:168 S.scrofa:168

L0P780              	100.00%		I3LTZ5              	100.00%
                    	       		F1SKR7              	80.87%
Bootstrap support for L0P780 as seed ortholog is 100%.
Bootstrap support for I3LTZ5 as seed ortholog is 100%.

Group of orthologs #802. Best score 168 bits
Score difference with first non-orthologous sequence - P.jiroveci:168 S.scrofa:168

L0PAG4              	100.00%		I3LB79              	100.00%
Bootstrap support for L0PAG4 as seed ortholog is 100%.
Bootstrap support for I3LB79 as seed ortholog is 100%.

Group of orthologs #803. Best score 167 bits
Score difference with first non-orthologous sequence - P.jiroveci:167 S.scrofa:167

L0PBH0              	100.00%		F1S0C9              	100.00%
L0PGS5              	38.80%		
Bootstrap support for L0PBH0 as seed ortholog is 100%.
Bootstrap support for F1S0C9 as seed ortholog is 100%.

Group of orthologs #804. Best score 167 bits
Score difference with first non-orthologous sequence - P.jiroveci:167 S.scrofa:167

L0P8P5              	100.00%		B5APU8              	100.00%
Bootstrap support for L0P8P5 as seed ortholog is 100%.
Bootstrap support for B5APU8 as seed ortholog is 100%.

Group of orthologs #805. Best score 167 bits
Score difference with first non-orthologous sequence - P.jiroveci:167 S.scrofa:167

L0P8V3              	100.00%		F1RWL4              	100.00%
Bootstrap support for L0P8V3 as seed ortholog is 100%.
Bootstrap support for F1RWL4 as seed ortholog is 100%.

Group of orthologs #806. Best score 167 bits
Score difference with first non-orthologous sequence - P.jiroveci:167 S.scrofa:167

L0P9L8              	100.00%		F1S8Y2              	100.00%
Bootstrap support for L0P9L8 as seed ortholog is 100%.
Bootstrap support for F1S8Y2 as seed ortholog is 100%.

Group of orthologs #807. Best score 167 bits
Score difference with first non-orthologous sequence - P.jiroveci:167 S.scrofa:50

L0PFH2              	100.00%		F1SC70              	100.00%
Bootstrap support for L0PFH2 as seed ortholog is 100%.
Bootstrap support for F1SC70 as seed ortholog is 94%.

Group of orthologs #808. Best score 167 bits
Score difference with first non-orthologous sequence - P.jiroveci:167 S.scrofa:167

L0PG54              	100.00%		Q56P27              	100.00%
Bootstrap support for L0PG54 as seed ortholog is 100%.
Bootstrap support for Q56P27 as seed ortholog is 100%.

Group of orthologs #809. Best score 166 bits
Score difference with first non-orthologous sequence - P.jiroveci:166 S.scrofa:20

L0PH23              	100.00%		I3LKJ4              	100.00%
                    	       		F1RIG0              	87.57%
                    	       		F1SL51              	9.79%
Bootstrap support for L0PH23 as seed ortholog is 100%.
Bootstrap support for I3LKJ4 as seed ortholog is 96%.

Group of orthologs #810. Best score 166 bits
Score difference with first non-orthologous sequence - P.jiroveci:166 S.scrofa:166

L0P9N4              	100.00%		A1XQU9              	100.00%
                    	       		F1SMQ1              	67.61%
Bootstrap support for L0P9N4 as seed ortholog is 100%.
Bootstrap support for A1XQU9 as seed ortholog is 100%.

Group of orthologs #811. Best score 166 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 S.scrofa:97

L0PFK9              	100.00%		A8CYZ2              	100.00%
Bootstrap support for L0PFK9 as seed ortholog is 98%.
Bootstrap support for A8CYZ2 as seed ortholog is 99%.

Group of orthologs #812. Best score 166 bits
Score difference with first non-orthologous sequence - P.jiroveci:93 S.scrofa:92

L0P9T6              	100.00%		F1RSL0              	100.00%
Bootstrap support for L0P9T6 as seed ortholog is 99%.
Bootstrap support for F1RSL0 as seed ortholog is 99%.

Group of orthologs #813. Best score 166 bits
Score difference with first non-orthologous sequence - P.jiroveci:166 S.scrofa:16

L0PD97              	100.00%		F1S5S7              	100.00%
Bootstrap support for L0PD97 as seed ortholog is 100%.
Bootstrap support for F1S5S7 as seed ortholog is 68%.
Alternative seed ortholog is F1S4L6 (16 bits away from this cluster)

Group of orthologs #814. Best score 166 bits
Score difference with first non-orthologous sequence - P.jiroveci:166 S.scrofa:166

L0PDA4              	100.00%		F1SJ22              	100.00%
Bootstrap support for L0PDA4 as seed ortholog is 100%.
Bootstrap support for F1SJ22 as seed ortholog is 100%.

Group of orthologs #815. Best score 166 bits
Score difference with first non-orthologous sequence - P.jiroveci:166 S.scrofa:166

L0PGK0              	100.00%		I3LFK1              	100.00%
Bootstrap support for L0PGK0 as seed ortholog is 100%.
Bootstrap support for I3LFK1 as seed ortholog is 100%.

Group of orthologs #816. Best score 165 bits
Score difference with first non-orthologous sequence - P.jiroveci:165 S.scrofa:165

L0PEA9              	100.00%		F1SJU7              	100.00%
                    	       		F1SIA4              	33.21%
Bootstrap support for L0PEA9 as seed ortholog is 100%.
Bootstrap support for F1SJU7 as seed ortholog is 100%.

Group of orthologs #817. Best score 165 bits
Score difference with first non-orthologous sequence - P.jiroveci:165 S.scrofa:34

L0PBK1              	100.00%		I3LPF4              	100.00%
Bootstrap support for L0PBK1 as seed ortholog is 100%.
Bootstrap support for I3LPF4 as seed ortholog is 94%.

Group of orthologs #818. Best score 164 bits
Score difference with first non-orthologous sequence - P.jiroveci:164 S.scrofa:164

L0PA78              	100.00%		F1S766              	100.00%
                    	       		F1SQ44              	100.00%
Bootstrap support for L0PA78 as seed ortholog is 100%.
Bootstrap support for F1S766 as seed ortholog is 100%.
Bootstrap support for F1SQ44 as seed ortholog is 100%.

Group of orthologs #819. Best score 164 bits
Score difference with first non-orthologous sequence - P.jiroveci:164 S.scrofa:164

L0PCP5              	100.00%		I3LC77              	100.00%
                    	       		F1S6C1              	79.63%
Bootstrap support for L0PCP5 as seed ortholog is 100%.
Bootstrap support for I3LC77 as seed ortholog is 100%.

Group of orthologs #820. Best score 164 bits
Score difference with first non-orthologous sequence - P.jiroveci:164 S.scrofa:164

L0P872              	100.00%		F1SBM2              	100.00%
Bootstrap support for L0P872 as seed ortholog is 100%.
Bootstrap support for F1SBM2 as seed ortholog is 100%.

Group of orthologs #821. Best score 163 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 S.scrofa:54

L0PE79              	100.00%		I3LCQ9              	100.00%
                    	       		Q2MJK3              	56.93%
                    	       		I3L5L1              	14.23%
                    	       		I3LAJ6              	12.36%
                    	       		I3LV17              	10.49%
                    	       		F1RHW4              	10.11%
                    	       		I3LQN1              	10.11%
                    	       		I3LBP8              	8.24%
                    	       		I3LH60              	5.62%
Bootstrap support for L0PE79 as seed ortholog is 99%.
Bootstrap support for I3LCQ9 as seed ortholog is 95%.

Group of orthologs #822. Best score 163 bits
Score difference with first non-orthologous sequence - P.jiroveci:163 S.scrofa:66

L0PC66              	100.00%		F1S3T2              	100.00%
L0PBN8              	74.70%		
Bootstrap support for L0PC66 as seed ortholog is 100%.
Bootstrap support for F1S3T2 as seed ortholog is 99%.

Group of orthologs #823. Best score 163 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 S.scrofa:83

L0P7L3              	100.00%		F1RKU4              	100.00%
Bootstrap support for L0P7L3 as seed ortholog is 99%.
Bootstrap support for F1RKU4 as seed ortholog is 99%.

Group of orthologs #824. Best score 163 bits
Score difference with first non-orthologous sequence - P.jiroveci:163 S.scrofa:163

L0PD11              	100.00%		F1RSF6              	100.00%
Bootstrap support for L0PD11 as seed ortholog is 100%.
Bootstrap support for F1RSF6 as seed ortholog is 100%.

Group of orthologs #825. Best score 162 bits
Score difference with first non-orthologous sequence - P.jiroveci:162 S.scrofa:105

L0PDS6              	100.00%		F1STL4              	100.00%
Bootstrap support for L0PDS6 as seed ortholog is 100%.
Bootstrap support for F1STL4 as seed ortholog is 99%.

Group of orthologs #826. Best score 162 bits
Score difference with first non-orthologous sequence - P.jiroveci:162 S.scrofa:162

L0PE13              	100.00%		F2Z522              	100.00%
Bootstrap support for L0PE13 as seed ortholog is 100%.
Bootstrap support for F2Z522 as seed ortholog is 100%.

Group of orthologs #827. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 S.scrofa:161

L0PCX3              	100.00%		F1RRU5              	100.00%
                    	       		F1S1U3              	35.49%
                    	       		F1RS85              	5.40%
Bootstrap support for L0PCX3 as seed ortholog is 100%.
Bootstrap support for F1RRU5 as seed ortholog is 100%.

Group of orthologs #828. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 S.scrofa:161

L0P9X0              	100.00%		P61288              	100.00%
                    	       		F1SQ68              	61.05%
                    	       		F1SBL3              	50.53%
Bootstrap support for L0P9X0 as seed ortholog is 100%.
Bootstrap support for P61288 as seed ortholog is 100%.

Group of orthologs #829. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 S.scrofa:161

L0P8S1              	100.00%		Q2XVP5              	100.00%
                    	       		I3LQA8              	49.34%
                    	       		F1SAJ9              	39.37%
Bootstrap support for L0P8S1 as seed ortholog is 100%.
Bootstrap support for Q2XVP5 as seed ortholog is 100%.

Group of orthologs #830. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 S.scrofa:161

L0PFX0              	100.00%		F1S614              	100.00%
                    	       		F1SMQ5              	65.02%
Bootstrap support for L0PFX0 as seed ortholog is 100%.
Bootstrap support for F1S614 as seed ortholog is 100%.

Group of orthologs #831. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 S.scrofa:161

L0PCG3              	100.00%		F1SHR3              	100.00%
                    	       		F1S5M0              	61.82%
Bootstrap support for L0PCG3 as seed ortholog is 100%.
Bootstrap support for F1SHR3 as seed ortholog is 100%.

Group of orthologs #832. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 S.scrofa:4

L0PFZ5              	100.00%		F1S1D3              	100.00%
Bootstrap support for L0PFZ5 as seed ortholog is 100%.
Bootstrap support for F1S1D3 as seed ortholog is 55%.
Alternative seed ortholog is F1RIH7 (4 bits away from this cluster)

Group of orthologs #833. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 S.scrofa:161

L0PG08              	100.00%		F1S3B0              	100.00%
Bootstrap support for L0PG08 as seed ortholog is 100%.
Bootstrap support for F1S3B0 as seed ortholog is 100%.

Group of orthologs #834. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:110 S.scrofa:69

L0PBF9              	100.00%		F1SHK6              	100.00%
Bootstrap support for L0PBF9 as seed ortholog is 99%.
Bootstrap support for F1SHK6 as seed ortholog is 99%.

Group of orthologs #835. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 S.scrofa:161

L0P7Z9              	100.00%		I3LJZ9              	100.00%
Bootstrap support for L0P7Z9 as seed ortholog is 100%.
Bootstrap support for I3LJZ9 as seed ortholog is 100%.

Group of orthologs #836. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 S.scrofa:161

L0PFL1              	100.00%		I3LVA9              	100.00%
Bootstrap support for L0PFL1 as seed ortholog is 100%.
Bootstrap support for I3LVA9 as seed ortholog is 100%.

Group of orthologs #837. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 S.scrofa:40

L0PBR7              	100.00%		F1RTQ5              	100.00%
                    	       		F1RTQ6              	83.91%
                    	       		F2Z579              	60.92%
                    	       		F2Z584              	59.77%
                    	       		I3LL41              	59.77%
                    	       		F2Z5L0              	59.77%
                    	       		F2Z580              	59.77%
                    	       		F2Z578              	57.47%
                    	       		F2Z581              	57.47%
                    	       		I3LAQ1              	57.47%
                    	       		I3LEB6              	57.47%
                    	       		I3LE39              	57.47%
                    	       		F1SSL5              	6.90%
Bootstrap support for L0PBR7 as seed ortholog is 100%.
Bootstrap support for F1RTQ5 as seed ortholog is 97%.

Group of orthologs #838. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 S.scrofa:43

L0PEX6              	100.00%		F1RNZ4              	100.00%
                    	       		F2Z563              	10.86%
                    	       		I3L7N8              	10.29%
Bootstrap support for L0PEX6 as seed ortholog is 99%.
Bootstrap support for F1RNZ4 as seed ortholog is 93%.

Group of orthologs #839. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 S.scrofa:160

L0P7D0              	100.00%		F1S1K0              	100.00%
                    	       		F1S1K1              	89.11%
                    	       		F1S874              	15.93%
Bootstrap support for L0P7D0 as seed ortholog is 100%.
Bootstrap support for F1S1K0 as seed ortholog is 100%.

Group of orthologs #840. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 S.scrofa:47

L0PBL1              	100.00%		F1RKS0              	100.00%
                    	       		F1RYC6              	43.18%
Bootstrap support for L0PBL1 as seed ortholog is 100%.
Bootstrap support for F1RKS0 as seed ortholog is 85%.

Group of orthologs #841. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 S.scrofa:114

L0PBX0              	100.00%		F1SCF9              	100.00%
                    	       		I3LUN1              	32.92%
Bootstrap support for L0PBX0 as seed ortholog is 100%.
Bootstrap support for F1SCF9 as seed ortholog is 99%.

Group of orthologs #842. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 S.scrofa:160

L0PDL8              	100.00%		F1SM74              	100.00%
L0PD52              	90.96%		
Bootstrap support for L0PDL8 as seed ortholog is 100%.
Bootstrap support for F1SM74 as seed ortholog is 100%.

Group of orthologs #843. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 S.scrofa:160

L0PFY9              	100.00%		F1SM56              	100.00%
                    	       		I3LF38              	53.57%
Bootstrap support for L0PFY9 as seed ortholog is 100%.
Bootstrap support for F1SM56 as seed ortholog is 100%.

Group of orthologs #844. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 S.scrofa:160

L0P7U2              	100.00%		F1SLB6              	100.00%
Bootstrap support for L0P7U2 as seed ortholog is 100%.
Bootstrap support for F1SLB6 as seed ortholog is 100%.

Group of orthologs #845. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 S.scrofa:160

L0PCA8              	100.00%		P62831              	100.00%
Bootstrap support for L0PCA8 as seed ortholog is 100%.
Bootstrap support for P62831 as seed ortholog is 100%.

Group of orthologs #846. Best score 159 bits
Score difference with first non-orthologous sequence - P.jiroveci:159 S.scrofa:159

L0PEN8              	100.00%		F1STS7              	100.00%
Bootstrap support for L0PEN8 as seed ortholog is 100%.
Bootstrap support for F1STS7 as seed ortholog is 100%.

Group of orthologs #847. Best score 159 bits
Score difference with first non-orthologous sequence - P.jiroveci:159 S.scrofa:159

L0PFX5              	100.00%		Q8MIZ3              	100.00%
Bootstrap support for L0PFX5 as seed ortholog is 100%.
Bootstrap support for Q8MIZ3 as seed ortholog is 100%.

Group of orthologs #848. Best score 158 bits
Score difference with first non-orthologous sequence - P.jiroveci:158 S.scrofa:158

L0P8H6              	100.00%		F1RGG1              	100.00%
                    	       		Q29308              	100.00%
                    	       		I3LQK3              	78.52%
Bootstrap support for L0P8H6 as seed ortholog is 100%.
Bootstrap support for F1RGG1 as seed ortholog is 100%.
Bootstrap support for Q29308 as seed ortholog is 100%.

Group of orthologs #849. Best score 158 bits
Score difference with first non-orthologous sequence - P.jiroveci:158 S.scrofa:158

L0PFS1              	100.00%		F1STT4              	100.00%
Bootstrap support for L0PFS1 as seed ortholog is 100%.
Bootstrap support for F1STT4 as seed ortholog is 100%.

Group of orthologs #850. Best score 158 bits
Score difference with first non-orthologous sequence - P.jiroveci:158 S.scrofa:158

L0PE89              	100.00%		I3LVA5              	100.00%
Bootstrap support for L0PE89 as seed ortholog is 100%.
Bootstrap support for I3LVA5 as seed ortholog is 100%.

Group of orthologs #851. Best score 157 bits
Score difference with first non-orthologous sequence - P.jiroveci:157 S.scrofa:64

L0P9F8              	100.00%		K7GM54              	100.00%
                    	       		F1RPT1              	17.84%
Bootstrap support for L0P9F8 as seed ortholog is 100%.
Bootstrap support for K7GM54 as seed ortholog is 99%.

Group of orthologs #852. Best score 157 bits
Score difference with first non-orthologous sequence - P.jiroveci:157 S.scrofa:157

L0PBS5              	100.00%		P62279              	100.00%
                    	       		I3L7A9              	17.24%
Bootstrap support for L0PBS5 as seed ortholog is 100%.
Bootstrap support for P62279 as seed ortholog is 100%.

Group of orthologs #853. Best score 157 bits
Score difference with first non-orthologous sequence - P.jiroveci:157 S.scrofa:157

L0PBI9              	100.00%		F2Z554              	100.00%
Bootstrap support for L0PBI9 as seed ortholog is 100%.
Bootstrap support for F2Z554 as seed ortholog is 100%.

Group of orthologs #854. Best score 156 bits
Score difference with first non-orthologous sequence - P.jiroveci:156 S.scrofa:156

L0PID4              	100.00%		I3LVD6              	100.00%
L0PGF7              	48.02%		
Bootstrap support for L0PID4 as seed ortholog is 100%.
Bootstrap support for I3LVD6 as seed ortholog is 100%.

Group of orthologs #855. Best score 156 bits
Score difference with first non-orthologous sequence - P.jiroveci:156 S.scrofa:156

L0PDH1              	100.00%		A1XQU5              	100.00%
Bootstrap support for L0PDH1 as seed ortholog is 100%.
Bootstrap support for A1XQU5 as seed ortholog is 100%.

Group of orthologs #856. Best score 156 bits
Score difference with first non-orthologous sequence - P.jiroveci:30 S.scrofa:156

L0PCJ0              	100.00%		F1RN42              	100.00%
Bootstrap support for L0PCJ0 as seed ortholog is 60%.
Alternative seed ortholog is L0PGZ6 (30 bits away from this cluster)
Bootstrap support for F1RN42 as seed ortholog is 100%.

Group of orthologs #857. Best score 156 bits
Score difference with first non-orthologous sequence - P.jiroveci:156 S.scrofa:156

L0P8Y0              	100.00%		F1RX84              	100.00%
Bootstrap support for L0P8Y0 as seed ortholog is 100%.
Bootstrap support for F1RX84 as seed ortholog is 100%.

Group of orthologs #858. Best score 156 bits
Score difference with first non-orthologous sequence - P.jiroveci:156 S.scrofa:156

L0PAR2              	100.00%		F1S1J9              	100.00%
Bootstrap support for L0PAR2 as seed ortholog is 100%.
Bootstrap support for F1S1J9 as seed ortholog is 100%.

Group of orthologs #859. Best score 156 bits
Score difference with first non-orthologous sequence - P.jiroveci:156 S.scrofa:156

L0PAY0              	100.00%		F1SHZ5              	100.00%
Bootstrap support for L0PAY0 as seed ortholog is 100%.
Bootstrap support for F1SHZ5 as seed ortholog is 100%.

Group of orthologs #860. Best score 156 bits
Score difference with first non-orthologous sequence - P.jiroveci:156 S.scrofa:156

L0PD35              	100.00%		K7N7E9              	100.00%
Bootstrap support for L0PD35 as seed ortholog is 100%.
Bootstrap support for K7N7E9 as seed ortholog is 100%.

Group of orthologs #861. Best score 155 bits
Score difference with first non-orthologous sequence - P.jiroveci:155 S.scrofa:155

L0P9Y2              	100.00%		Q95307              	100.00%
                    	       		I3LN23              	34.17%
                    	       		I3L8K3              	16.67%
                    	       		F1RU15              	12.50%
Bootstrap support for L0P9Y2 as seed ortholog is 100%.
Bootstrap support for Q95307 as seed ortholog is 100%.

Group of orthologs #862. Best score 155 bits
Score difference with first non-orthologous sequence - P.jiroveci:155 S.scrofa:67

L0PDJ7              	100.00%		F2Z5R2              	100.00%
                    	       		F1SJ12              	15.35%
Bootstrap support for L0PDJ7 as seed ortholog is 100%.
Bootstrap support for F2Z5R2 as seed ortholog is 99%.

Group of orthologs #863. Best score 155 bits
Score difference with first non-orthologous sequence - P.jiroveci:155 S.scrofa:155

L0PDX6              	100.00%		I3LP27              	100.00%
                    	       		I3LKQ2              	32.99%
Bootstrap support for L0PDX6 as seed ortholog is 100%.
Bootstrap support for I3LP27 as seed ortholog is 100%.

Group of orthologs #864. Best score 155 bits
Score difference with first non-orthologous sequence - P.jiroveci:155 S.scrofa:155

L0PEN3              	100.00%		F2Z4X9              	100.00%
Bootstrap support for L0PEN3 as seed ortholog is 100%.
Bootstrap support for F2Z4X9 as seed ortholog is 100%.

Group of orthologs #865. Best score 155 bits
Score difference with first non-orthologous sequence - P.jiroveci:155 S.scrofa:155

L0PEV5              	100.00%		I3LPV9              	100.00%
Bootstrap support for L0PEV5 as seed ortholog is 100%.
Bootstrap support for I3LPV9 as seed ortholog is 100%.

Group of orthologs #866. Best score 154 bits
Score difference with first non-orthologous sequence - P.jiroveci:154 S.scrofa:154

L0PF66              	100.00%		A8U4R4              	100.00%
                    	       		I3LCX0              	55.92%
                    	       		I3L954              	54.64%
Bootstrap support for L0PF66 as seed ortholog is 100%.
Bootstrap support for A8U4R4 as seed ortholog is 100%.

Group of orthologs #867. Best score 154 bits
Score difference with first non-orthologous sequence - P.jiroveci:154 S.scrofa:154

L0PI55              	100.00%		F1RZB7              	100.00%
L0P840              	83.57%		
Bootstrap support for L0PI55 as seed ortholog is 100%.
Bootstrap support for F1RZB7 as seed ortholog is 100%.

Group of orthologs #868. Best score 154 bits
Score difference with first non-orthologous sequence - P.jiroveci:154 S.scrofa:154

L0P7V4              	100.00%		A5GFN5              	100.00%
Bootstrap support for L0P7V4 as seed ortholog is 100%.
Bootstrap support for A5GFN5 as seed ortholog is 100%.

Group of orthologs #869. Best score 154 bits
Score difference with first non-orthologous sequence - P.jiroveci:154 S.scrofa:154

L0PFP7              	100.00%		F1RK60              	100.00%
Bootstrap support for L0PFP7 as seed ortholog is 100%.
Bootstrap support for F1RK60 as seed ortholog is 100%.

Group of orthologs #870. Best score 154 bits
Score difference with first non-orthologous sequence - P.jiroveci:154 S.scrofa:154

L0PFI7              	100.00%		F1S4U4              	100.00%
Bootstrap support for L0PFI7 as seed ortholog is 100%.
Bootstrap support for F1S4U4 as seed ortholog is 100%.

Group of orthologs #871. Best score 154 bits
Score difference with first non-orthologous sequence - P.jiroveci:154 S.scrofa:70

L0PDN5              	100.00%		I3LFQ9              	100.00%
Bootstrap support for L0PDN5 as seed ortholog is 100%.
Bootstrap support for I3LFQ9 as seed ortholog is 97%.

Group of orthologs #872. Best score 154 bits
Score difference with first non-orthologous sequence - P.jiroveci:154 S.scrofa:56

L0PF33              	100.00%		I3LLA5              	100.00%
Bootstrap support for L0PF33 as seed ortholog is 100%.
Bootstrap support for I3LLA5 as seed ortholog is 99%.

Group of orthologs #873. Best score 153 bits
Score difference with first non-orthologous sequence - P.jiroveci:153 S.scrofa:153

L0PBQ0              	100.00%		F1RXP8              	100.00%
Bootstrap support for L0PBQ0 as seed ortholog is 100%.
Bootstrap support for F1RXP8 as seed ortholog is 100%.

Group of orthologs #874. Best score 153 bits
Score difference with first non-orthologous sequence - P.jiroveci:153 S.scrofa:153

L0PCP0              	100.00%		F1SU73              	100.00%
Bootstrap support for L0PCP0 as seed ortholog is 100%.
Bootstrap support for F1SU73 as seed ortholog is 100%.

Group of orthologs #875. Best score 153 bits
Score difference with first non-orthologous sequence - P.jiroveci:153 S.scrofa:153

L0PDP9              	100.00%		I3L8T8              	100.00%
Bootstrap support for L0PDP9 as seed ortholog is 100%.
Bootstrap support for I3L8T8 as seed ortholog is 100%.

Group of orthologs #876. Best score 153 bits
Score difference with first non-orthologous sequence - P.jiroveci:153 S.scrofa:75

L0PDX9              	100.00%		I3LQ69              	100.00%
Bootstrap support for L0PDX9 as seed ortholog is 100%.
Bootstrap support for I3LQ69 as seed ortholog is 96%.

Group of orthologs #877. Best score 153 bits
Score difference with first non-orthologous sequence - P.jiroveci:42 S.scrofa:37

L0PCI0              	100.00%		I3LUU8              	100.00%
Bootstrap support for L0PCI0 as seed ortholog is 81%.
Bootstrap support for I3LUU8 as seed ortholog is 72%.
Alternative seed ortholog is F1S0H9 (37 bits away from this cluster)

Group of orthologs #878. Best score 152 bits
Score difference with first non-orthologous sequence - P.jiroveci:152 S.scrofa:152

L0PEG0              	100.00%		F1S2E5              	100.00%
                    	       		F1SNB6              	44.86%
                    	       		I3LK07              	44.86%
Bootstrap support for L0PEG0 as seed ortholog is 100%.
Bootstrap support for F1S2E5 as seed ortholog is 100%.

Group of orthologs #879. Best score 152 bits
Score difference with first non-orthologous sequence - P.jiroveci:152 S.scrofa:152

L0PE36              	100.00%		F1SHW8              	100.00%
                    	       		F1RWA6              	40.80%
                    	       		I3LAD5              	37.05%
Bootstrap support for L0PE36 as seed ortholog is 100%.
Bootstrap support for F1SHW8 as seed ortholog is 100%.

Group of orthologs #880. Best score 152 bits
Score difference with first non-orthologous sequence - P.jiroveci:152 S.scrofa:152

L0PDZ3              	100.00%		F1RU41              	100.00%
                    	       		F1RKJ4              	36.59%
Bootstrap support for L0PDZ3 as seed ortholog is 100%.
Bootstrap support for F1RU41 as seed ortholog is 100%.

Group of orthologs #881. Best score 152 bits
Score difference with first non-orthologous sequence - P.jiroveci:152 S.scrofa:152

L0PB59              	100.00%		F1RW09              	100.00%
Bootstrap support for L0PB59 as seed ortholog is 100%.
Bootstrap support for F1RW09 as seed ortholog is 100%.

Group of orthologs #882. Best score 152 bits
Score difference with first non-orthologous sequence - P.jiroveci:152 S.scrofa:152

L0PA22              	100.00%		F1S0T7              	100.00%
Bootstrap support for L0PA22 as seed ortholog is 100%.
Bootstrap support for F1S0T7 as seed ortholog is 100%.

Group of orthologs #883. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 S.scrofa:151

L0PDV9              	100.00%		F1S2W7              	100.00%
Bootstrap support for L0PDV9 as seed ortholog is 100%.
Bootstrap support for F1S2W7 as seed ortholog is 100%.

Group of orthologs #884. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 S.scrofa:151

L0PG38              	100.00%		F1SRI0              	100.00%
Bootstrap support for L0PG38 as seed ortholog is 100%.
Bootstrap support for F1SRI0 as seed ortholog is 100%.

Group of orthologs #885. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 S.scrofa:151

L0PFD7              	100.00%		I3LU26              	100.00%
Bootstrap support for L0PFD7 as seed ortholog is 100%.
Bootstrap support for I3LU26 as seed ortholog is 100%.

Group of orthologs #886. Best score 150 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 S.scrofa:67

L0PDE1              	100.00%		F1RFX9              	100.00%
                    	       		F1RTH1              	8.68%
                    	       		O97649              	5.86%
Bootstrap support for L0PDE1 as seed ortholog is 99%.
Bootstrap support for F1RFX9 as seed ortholog is 98%.

Group of orthologs #887. Best score 150 bits
Score difference with first non-orthologous sequence - P.jiroveci:150 S.scrofa:150

L0P7U6              	100.00%		D0G788              	100.00%
Bootstrap support for L0P7U6 as seed ortholog is 100%.
Bootstrap support for D0G788 as seed ortholog is 100%.

Group of orthologs #888. Best score 150 bits
Score difference with first non-orthologous sequence - P.jiroveci:150 S.scrofa:150

L0PAR5              	100.00%		F1RXR3              	100.00%
Bootstrap support for L0PAR5 as seed ortholog is 100%.
Bootstrap support for F1RXR3 as seed ortholog is 100%.

Group of orthologs #889. Best score 150 bits
Score difference with first non-orthologous sequence - P.jiroveci:150 S.scrofa:150

L0PGI9              	100.00%		F1SB37              	100.00%
Bootstrap support for L0PGI9 as seed ortholog is 100%.
Bootstrap support for F1SB37 as seed ortholog is 100%.

Group of orthologs #890. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:63 S.scrofa:48

L0P9Y3              	100.00%		I3LRN5              	100.00%
                    	       		F1SFQ4              	30.90%
                    	       		I3LEC2              	27.64%
                    	       		I3LRF8              	12.42%
Bootstrap support for L0P9Y3 as seed ortholog is 95%.
Bootstrap support for I3LRN5 as seed ortholog is 95%.

Group of orthologs #891. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 S.scrofa:149

L0P9D1              	100.00%		F1RPV1              	100.00%
Bootstrap support for L0P9D1 as seed ortholog is 100%.
Bootstrap support for F1RPV1 as seed ortholog is 100%.

Group of orthologs #892. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 S.scrofa:149

L0P6R0              	100.00%		F1RU31              	100.00%
Bootstrap support for L0P6R0 as seed ortholog is 100%.
Bootstrap support for F1RU31 as seed ortholog is 100%.

Group of orthologs #893. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 S.scrofa:149

L0PFD5              	100.00%		F1SCX5              	100.00%
Bootstrap support for L0PFD5 as seed ortholog is 100%.
Bootstrap support for F1SCX5 as seed ortholog is 100%.

Group of orthologs #894. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 S.scrofa:23

L0PG65              	100.00%		A5GHK9              	100.00%
                    	       		I3L9Z5              	39.65%
Bootstrap support for L0PG65 as seed ortholog is 100%.
Bootstrap support for A5GHK9 as seed ortholog is 75%.

Group of orthologs #895. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 S.scrofa:148

L0PD01              	100.00%		F1RJ74              	100.00%
L0PF42              	100.00%		
Bootstrap support for L0PD01 as seed ortholog is 100%.
Bootstrap support for L0PF42 as seed ortholog is 100%.
Bootstrap support for F1RJ74 as seed ortholog is 100%.

Group of orthologs #896. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 S.scrofa:148

L0PFG9              	100.00%		F1S2V3              	100.00%
Bootstrap support for L0PFG9 as seed ortholog is 100%.
Bootstrap support for F1S2V3 as seed ortholog is 100%.

Group of orthologs #897. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 S.scrofa:148

L0PH83              	100.00%		F1S3G5              	100.00%
Bootstrap support for L0PH83 as seed ortholog is 100%.
Bootstrap support for F1S3G5 as seed ortholog is 100%.

Group of orthologs #898. Best score 147 bits
Score difference with first non-orthologous sequence - P.jiroveci:147 S.scrofa:147

L0P9U0              	100.00%		F1SBH4              	100.00%
Bootstrap support for L0P9U0 as seed ortholog is 100%.
Bootstrap support for F1SBH4 as seed ortholog is 100%.

Group of orthologs #899. Best score 147 bits
Score difference with first non-orthologous sequence - P.jiroveci:147 S.scrofa:147

L0PCU6              	100.00%		F1SDX8              	100.00%
Bootstrap support for L0PCU6 as seed ortholog is 100%.
Bootstrap support for F1SDX8 as seed ortholog is 100%.

Group of orthologs #900. Best score 147 bits
Score difference with first non-orthologous sequence - P.jiroveci:26 S.scrofa:147

L0PGP9              	100.00%		F1SG16              	100.00%
Bootstrap support for L0PGP9 as seed ortholog is 79%.
Bootstrap support for F1SG16 as seed ortholog is 100%.

Group of orthologs #901. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 S.scrofa:146

L0PE18              	100.00%		F1RSW0              	100.00%
                    	       		F1SG28              	71.39%
                    	       		I3LD92              	67.54%
                    	       		F1SH09              	43.68%
                    	       		I3LU85              	14.86%
                    	       		I3LQK2              	14.56%
                    	       		I3LTK9              	14.05%
                    	       		I3LEI5              	10.72%
                    	       		F1RF15              	7.99%
                    	       		F1RF14              	7.48%
Bootstrap support for L0PE18 as seed ortholog is 100%.
Bootstrap support for F1RSW0 as seed ortholog is 100%.

Group of orthologs #902. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 S.scrofa:146

L0PEB8              	100.00%		F1S8G6              	100.00%
                    	       		I3LBT3              	40.30%
Bootstrap support for L0PEB8 as seed ortholog is 100%.
Bootstrap support for F1S8G6 as seed ortholog is 100%.

Group of orthologs #903. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 S.scrofa:146

L0PDR9              	100.00%		I3LNP0              	100.00%
L0P8I3              	72.56%		
Bootstrap support for L0PDR9 as seed ortholog is 100%.
Bootstrap support for I3LNP0 as seed ortholog is 100%.

Group of orthologs #904. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 S.scrofa:40

L0P7E9              	100.00%		Q29561              	100.00%
                    	       		F1S6D8              	80.08%
Bootstrap support for L0P7E9 as seed ortholog is 100%.
Bootstrap support for Q29561 as seed ortholog is 94%.

Group of orthologs #905. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 S.scrofa:146

L0P9F5              	100.00%		F1RKI9              	100.00%
Bootstrap support for L0P9F5 as seed ortholog is 100%.
Bootstrap support for F1RKI9 as seed ortholog is 100%.

Group of orthologs #906. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 S.scrofa:72

L0PBZ4              	100.00%		F1RXI6              	100.00%
Bootstrap support for L0PBZ4 as seed ortholog is 100%.
Bootstrap support for F1RXI6 as seed ortholog is 99%.

Group of orthologs #907. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 S.scrofa:146

L0P9T1              	100.00%		I3LE74              	100.00%
Bootstrap support for L0P9T1 as seed ortholog is 100%.
Bootstrap support for I3LE74 as seed ortholog is 100%.

Group of orthologs #908. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 S.scrofa:146

L0P7A4              	100.00%		I3LL24              	100.00%
Bootstrap support for L0P7A4 as seed ortholog is 100%.
Bootstrap support for I3LL24 as seed ortholog is 100%.

Group of orthologs #909. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 S.scrofa:144

L0PC24              	100.00%		F1RFB9              	100.00%
Bootstrap support for L0PC24 as seed ortholog is 100%.
Bootstrap support for F1RFB9 as seed ortholog is 100%.

Group of orthologs #910. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 S.scrofa:144

L0PEC9              	100.00%		I3LK70              	100.00%
Bootstrap support for L0PEC9 as seed ortholog is 100%.
Bootstrap support for I3LK70 as seed ortholog is 100%.

Group of orthologs #911. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 S.scrofa:144

L0PFW9              	100.00%		Q06AA4              	100.00%
Bootstrap support for L0PFW9 as seed ortholog is 100%.
Bootstrap support for Q06AA4 as seed ortholog is 100%.

Group of orthologs #912. Best score 143 bits
Score difference with first non-orthologous sequence - P.jiroveci:143 S.scrofa:143

L0P778              	100.00%		F1RJC9              	100.00%
                    	       		F1RF63              	43.77%
                    	       		F1RF65              	5.28%
Bootstrap support for L0P778 as seed ortholog is 100%.
Bootstrap support for F1RJC9 as seed ortholog is 100%.

Group of orthologs #913. Best score 143 bits
Score difference with first non-orthologous sequence - P.jiroveci:143 S.scrofa:67

L0P963              	100.00%		F1RWL1              	100.00%
Bootstrap support for L0P963 as seed ortholog is 100%.
Bootstrap support for F1RWL1 as seed ortholog is 95%.

Group of orthologs #914. Best score 143 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 S.scrofa:143

L0PA67              	100.00%		F2Z5Q7              	100.00%
Bootstrap support for L0PA67 as seed ortholog is 99%.
Bootstrap support for F2Z5Q7 as seed ortholog is 100%.

Group of orthologs #915. Best score 142 bits
Score difference with first non-orthologous sequence - P.jiroveci:142 S.scrofa:142

L0PEZ4              	100.00%		F1RX24              	100.00%
Bootstrap support for L0PEZ4 as seed ortholog is 100%.
Bootstrap support for F1RX24 as seed ortholog is 100%.

Group of orthologs #916. Best score 142 bits
Score difference with first non-orthologous sequence - P.jiroveci:142 S.scrofa:142

L0PDX2              	100.00%		F1S713              	100.00%
Bootstrap support for L0PDX2 as seed ortholog is 100%.
Bootstrap support for F1S713 as seed ortholog is 100%.

Group of orthologs #917. Best score 142 bits
Score difference with first non-orthologous sequence - P.jiroveci:142 S.scrofa:142

L0PF45              	100.00%		F1SS19              	100.00%
Bootstrap support for L0PF45 as seed ortholog is 100%.
Bootstrap support for F1SS19 as seed ortholog is 100%.

Group of orthologs #918. Best score 142 bits
Score difference with first non-orthologous sequence - P.jiroveci:142 S.scrofa:142

L0PDW9              	100.00%		I3LU89              	100.00%
Bootstrap support for L0PDW9 as seed ortholog is 100%.
Bootstrap support for I3LU89 as seed ortholog is 100%.

Group of orthologs #919. Best score 141 bits
Score difference with first non-orthologous sequence - P.jiroveci:141 S.scrofa:141

L0PFR0              	100.00%		F1RYT5              	100.00%
                    	       		F1SIW3              	82.07%
Bootstrap support for L0PFR0 as seed ortholog is 100%.
Bootstrap support for F1RYT5 as seed ortholog is 100%.

Group of orthologs #920. Best score 141 bits
Score difference with first non-orthologous sequence - P.jiroveci:37 S.scrofa:28

L0PAX2              	100.00%		F1S9W6              	100.00%
                    	       		F1S6G0              	42.90%
Bootstrap support for L0PAX2 as seed ortholog is 89%.
Bootstrap support for F1S9W6 as seed ortholog is 83%.

Group of orthologs #921. Best score 141 bits
Score difference with first non-orthologous sequence - P.jiroveci:141 S.scrofa:79

L0P8I2              	100.00%		F1SMC1              	100.00%
                    	       		I3LEP6              	100.00%
Bootstrap support for L0P8I2 as seed ortholog is 100%.
Bootstrap support for F1SMC1 as seed ortholog is 99%.
Bootstrap support for I3LEP6 as seed ortholog is 99%.

Group of orthologs #922. Best score 141 bits
Score difference with first non-orthologous sequence - P.jiroveci:141 S.scrofa:141

L0PA83              	100.00%		F2Z5Q2              	100.00%
Bootstrap support for L0PA83 as seed ortholog is 100%.
Bootstrap support for F2Z5Q2 as seed ortholog is 100%.

Group of orthologs #923. Best score 140 bits
Score difference with first non-orthologous sequence - P.jiroveci:140 S.scrofa:140

L0P9B3              	100.00%		F1SAD1              	100.00%
Bootstrap support for L0P9B3 as seed ortholog is 100%.
Bootstrap support for F1SAD1 as seed ortholog is 100%.

Group of orthologs #924. Best score 140 bits
Score difference with first non-orthologous sequence - P.jiroveci:140 S.scrofa:140

L0P7V8              	100.00%		F1SU46              	100.00%
Bootstrap support for L0P7V8 as seed ortholog is 100%.
Bootstrap support for F1SU46 as seed ortholog is 100%.

Group of orthologs #925. Best score 140 bits
Score difference with first non-orthologous sequence - P.jiroveci:140 S.scrofa:140

L0PFP4              	100.00%		F1SJE8              	100.00%
Bootstrap support for L0PFP4 as seed ortholog is 100%.
Bootstrap support for F1SJE8 as seed ortholog is 100%.

Group of orthologs #926. Best score 140 bits
Score difference with first non-orthologous sequence - P.jiroveci:140 S.scrofa:63

L0PEV3              	100.00%		F1SU72              	100.00%
Bootstrap support for L0PEV3 as seed ortholog is 100%.
Bootstrap support for F1SU72 as seed ortholog is 99%.

Group of orthologs #927. Best score 140 bits
Score difference with first non-orthologous sequence - P.jiroveci:140 S.scrofa:140

L0P800              	100.00%		I3LVJ9              	100.00%
Bootstrap support for L0P800 as seed ortholog is 100%.
Bootstrap support for I3LVJ9 as seed ortholog is 100%.

Group of orthologs #928. Best score 139 bits
Score difference with first non-orthologous sequence - P.jiroveci:139 S.scrofa:139

L0PCA3              	100.00%		I3LSD1              	100.00%
                    	       		F1SJ74              	19.96%
                    	       		I3LSE8              	18.01%
                    	       		F1SLP9              	15.41%
Bootstrap support for L0PCA3 as seed ortholog is 100%.
Bootstrap support for I3LSD1 as seed ortholog is 100%.

Group of orthologs #929. Best score 139 bits
Score difference with first non-orthologous sequence - P.jiroveci:139 S.scrofa:83

L0PAN5              	100.00%		F1S5R9              	100.00%
                    	       		P31006              	100.00%
                    	       		F1RPM4              	8.76%
Bootstrap support for L0PAN5 as seed ortholog is 100%.
Bootstrap support for F1S5R9 as seed ortholog is 99%.
Bootstrap support for P31006 as seed ortholog is 99%.

Group of orthologs #930. Best score 139 bits
Score difference with first non-orthologous sequence - P.jiroveci:139 S.scrofa:139

L0P938              	100.00%		F2Z5S7              	100.00%
                    	       		F1RWH4              	60.00%
Bootstrap support for L0P938 as seed ortholog is 100%.
Bootstrap support for F2Z5S7 as seed ortholog is 100%.

Group of orthologs #931. Best score 139 bits
Score difference with first non-orthologous sequence - P.jiroveci:139 S.scrofa:139

L0PDW7              	100.00%		I3L5S2              	100.00%
L0PIN1              	58.90%		
Bootstrap support for L0PDW7 as seed ortholog is 100%.
Bootstrap support for I3L5S2 as seed ortholog is 100%.

Group of orthologs #932. Best score 139 bits
Score difference with first non-orthologous sequence - P.jiroveci:139 S.scrofa:139

L0P733              	100.00%		F1S544              	100.00%
Bootstrap support for L0P733 as seed ortholog is 100%.
Bootstrap support for F1S544 as seed ortholog is 100%.

Group of orthologs #933. Best score 139 bits
Score difference with first non-orthologous sequence - P.jiroveci:139 S.scrofa:139

L0PEL6              	100.00%		F1RW08              	100.00%
Bootstrap support for L0PEL6 as seed ortholog is 100%.
Bootstrap support for F1RW08 as seed ortholog is 100%.

Group of orthologs #934. Best score 139 bits
Score difference with first non-orthologous sequence - P.jiroveci:139 S.scrofa:139

L0PAW7              	100.00%		F1S956              	100.00%
Bootstrap support for L0PAW7 as seed ortholog is 100%.
Bootstrap support for F1S956 as seed ortholog is 100%.

Group of orthologs #935. Best score 139 bits
Score difference with first non-orthologous sequence - P.jiroveci:139 S.scrofa:139

L0PG78              	100.00%		F1S413              	100.00%
Bootstrap support for L0PG78 as seed ortholog is 100%.
Bootstrap support for F1S413 as seed ortholog is 100%.

Group of orthologs #936. Best score 139 bits
Score difference with first non-orthologous sequence - P.jiroveci:139 S.scrofa:139

L0PCC8              	100.00%		F1SD54              	100.00%
Bootstrap support for L0PCC8 as seed ortholog is 100%.
Bootstrap support for F1SD54 as seed ortholog is 100%.

Group of orthologs #937. Best score 139 bits
Score difference with first non-orthologous sequence - P.jiroveci:139 S.scrofa:139

L0P6S2              	100.00%		F1SRM2              	100.00%
Bootstrap support for L0P6S2 as seed ortholog is 100%.
Bootstrap support for F1SRM2 as seed ortholog is 100%.

Group of orthologs #938. Best score 139 bits
Score difference with first non-orthologous sequence - P.jiroveci:139 S.scrofa:139

L0P799              	100.00%		I3LAX1              	100.00%
Bootstrap support for L0P799 as seed ortholog is 100%.
Bootstrap support for I3LAX1 as seed ortholog is 100%.

Group of orthologs #939. Best score 138 bits
Score difference with first non-orthologous sequence - P.jiroveci:138 S.scrofa:138

L0P7A1              	100.00%		F1S227              	100.00%
Bootstrap support for L0P7A1 as seed ortholog is 100%.
Bootstrap support for F1S227 as seed ortholog is 100%.

Group of orthologs #940. Best score 138 bits
Score difference with first non-orthologous sequence - P.jiroveci:138 S.scrofa:138

L0PBI8              	100.00%		I3LDM5              	100.00%
Bootstrap support for L0PBI8 as seed ortholog is 100%.
Bootstrap support for I3LDM5 as seed ortholog is 100%.

Group of orthologs #941. Best score 137 bits
Score difference with first non-orthologous sequence - P.jiroveci:137 S.scrofa:78

L0P9S9              	100.00%		I3LHA1              	100.00%
L0PDT3              	43.44%		F1SGW8              	48.47%
                    	       		F1SPP6              	38.52%
                    	       		F1SGX8              	35.03%
                    	       		I3LQM7              	30.79%
                    	       		F1SRV0              	23.81%
Bootstrap support for L0P9S9 as seed ortholog is 100%.
Bootstrap support for I3LHA1 as seed ortholog is 95%.

Group of orthologs #942. Best score 137 bits
Score difference with first non-orthologous sequence - P.jiroveci:137 S.scrofa:137

L0P8Z8              	100.00%		F1RLM7              	100.00%
L0PFN6              	78.66%		
Bootstrap support for L0P8Z8 as seed ortholog is 100%.
Bootstrap support for F1RLM7 as seed ortholog is 100%.

Group of orthologs #943. Best score 136 bits
Score difference with first non-orthologous sequence - P.jiroveci:136 S.scrofa:136

L0PB34              	100.00%		F2Z5H8              	100.00%
                    	       		F1RM36              	16.13%
Bootstrap support for L0PB34 as seed ortholog is 100%.
Bootstrap support for F2Z5H8 as seed ortholog is 100%.

Group of orthologs #944. Best score 136 bits
Score difference with first non-orthologous sequence - P.jiroveci:136 S.scrofa:136

L0PCN2              	100.00%		I3LR29              	100.00%
Bootstrap support for L0PCN2 as seed ortholog is 100%.
Bootstrap support for I3LR29 as seed ortholog is 100%.

Group of orthologs #945. Best score 134 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 S.scrofa:134

L0P8G3              	100.00%		F1SIB9              	100.00%
                    	       		I3LIL1              	77.55%
                    	       		F1SJR4              	43.66%
Bootstrap support for L0P8G3 as seed ortholog is 100%.
Bootstrap support for F1SIB9 as seed ortholog is 100%.

Group of orthologs #946. Best score 134 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 S.scrofa:134

L0PFS7              	100.00%		F1SE06              	100.00%
                    	       		F1SQM4              	32.92%
Bootstrap support for L0PFS7 as seed ortholog is 100%.
Bootstrap support for F1SE06 as seed ortholog is 100%.

Group of orthologs #947. Best score 134 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 S.scrofa:134

L0PAT4              	100.00%		A5GFW7              	100.00%
Bootstrap support for L0PAT4 as seed ortholog is 100%.
Bootstrap support for A5GFW7 as seed ortholog is 100%.

Group of orthologs #948. Best score 134 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 S.scrofa:134

L0P948              	100.00%		F1RGW8              	100.00%
Bootstrap support for L0P948 as seed ortholog is 100%.
Bootstrap support for F1RGW8 as seed ortholog is 100%.

Group of orthologs #949. Best score 134 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 S.scrofa:33

L0P903              	100.00%		F1RIX8              	100.00%
Bootstrap support for L0P903 as seed ortholog is 100%.
Bootstrap support for F1RIX8 as seed ortholog is 85%.

Group of orthologs #950. Best score 134 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 S.scrofa:134

L0PCX8              	100.00%		F1RSP0              	100.00%
Bootstrap support for L0PCX8 as seed ortholog is 100%.
Bootstrap support for F1RSP0 as seed ortholog is 100%.

Group of orthologs #951. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:68 S.scrofa:133

L0PCC6              	100.00%		I3LKN9              	100.00%
                    	       		I3L5B8              	71.55%
                    	       		I3LSY3              	34.95%
                    	       		F1SP95              	24.04%
Bootstrap support for L0PCC6 as seed ortholog is 98%.
Bootstrap support for I3LKN9 as seed ortholog is 100%.

Group of orthologs #952. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 S.scrofa:133

L0PCT4              	100.00%		I3LUT9              	100.00%
                    	       		I3LN98              	44.09%
                    	       		F1SMD4              	22.66%
Bootstrap support for L0PCT4 as seed ortholog is 100%.
Bootstrap support for I3LUT9 as seed ortholog is 100%.

Group of orthologs #953. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:46 S.scrofa:72

L0PFG2              	100.00%		Q06AB3              	100.00%
                    	       		Q6SEG5              	36.20%
                    	       		I3L7W1              	20.18%
Bootstrap support for L0PFG2 as seed ortholog is 94%.
Bootstrap support for Q06AB3 as seed ortholog is 98%.

Group of orthologs #954. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 S.scrofa:133

L0P8W1              	100.00%		F1RUP8              	100.00%
                    	       		I3LND7              	100.00%
Bootstrap support for L0P8W1 as seed ortholog is 100%.
Bootstrap support for F1RUP8 as seed ortholog is 100%.
Bootstrap support for I3LND7 as seed ortholog is 100%.

Group of orthologs #955. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 S.scrofa:17

L0PDT8              	100.00%		F1SA56              	100.00%
L0P9R2              	92.50%		
Bootstrap support for L0PDT8 as seed ortholog is 100%.
Bootstrap support for F1SA56 as seed ortholog is 61%.
Alternative seed ortholog is F1RLE8 (17 bits away from this cluster)

Group of orthologs #956. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 S.scrofa:133

L0P7Y4              	100.00%		F1RSJ8              	100.00%
Bootstrap support for L0P7Y4 as seed ortholog is 100%.
Bootstrap support for F1RSJ8 as seed ortholog is 100%.

Group of orthologs #957. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 S.scrofa:133

L0PG28              	100.00%		F1RHK3              	100.00%
Bootstrap support for L0PG28 as seed ortholog is 100%.
Bootstrap support for F1RHK3 as seed ortholog is 100%.

Group of orthologs #958. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 S.scrofa:133

L0PCZ5              	100.00%		F1RU54              	100.00%
Bootstrap support for L0PCZ5 as seed ortholog is 100%.
Bootstrap support for F1RU54 as seed ortholog is 100%.

Group of orthologs #959. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 S.scrofa:133

L0PEV6              	100.00%		F1RZT5              	100.00%
Bootstrap support for L0PEV6 as seed ortholog is 100%.
Bootstrap support for F1RZT5 as seed ortholog is 100%.

Group of orthologs #960. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 S.scrofa:133

L0PFH1              	100.00%		F1SBM0              	100.00%
Bootstrap support for L0PFH1 as seed ortholog is 100%.
Bootstrap support for F1SBM0 as seed ortholog is 100%.

Group of orthologs #961. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 S.scrofa:133

L0PEI9              	100.00%		F1SUH8              	100.00%
Bootstrap support for L0PEI9 as seed ortholog is 99%.
Bootstrap support for F1SUH8 as seed ortholog is 100%.

Group of orthologs #962. Best score 132 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 S.scrofa:64

L0P8G0              	100.00%		F1S534              	100.00%
Bootstrap support for L0P8G0 as seed ortholog is 99%.
Bootstrap support for F1S534 as seed ortholog is 99%.

Group of orthologs #963. Best score 132 bits
Score difference with first non-orthologous sequence - P.jiroveci:132 S.scrofa:24

L0PA51              	100.00%		I3LSS2              	100.00%
Bootstrap support for L0PA51 as seed ortholog is 100%.
Bootstrap support for I3LSS2 as seed ortholog is 75%.

Group of orthologs #964. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 S.scrofa:131

L0P9B0              	100.00%		F1RXX7              	100.00%
                    	       		I3LKX8              	40.22%
Bootstrap support for L0P9B0 as seed ortholog is 100%.
Bootstrap support for F1RXX7 as seed ortholog is 100%.

Group of orthologs #965. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 S.scrofa:131

L0PDN8              	100.00%		I3LCE6              	100.00%
                    	       		F1SHI5              	7.96%
Bootstrap support for L0PDN8 as seed ortholog is 100%.
Bootstrap support for I3LCE6 as seed ortholog is 100%.

Group of orthologs #966. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 S.scrofa:85

L0PDY2              	100.00%		F1RJM8              	100.00%
Bootstrap support for L0PDY2 as seed ortholog is 100%.
Bootstrap support for F1RJM8 as seed ortholog is 99%.

Group of orthologs #967. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 S.scrofa:131

L0P9E5              	100.00%		F1S5S1              	100.00%
Bootstrap support for L0P9E5 as seed ortholog is 100%.
Bootstrap support for F1S5S1 as seed ortholog is 100%.

Group of orthologs #968. Best score 130 bits
Score difference with first non-orthologous sequence - P.jiroveci:130 S.scrofa:130

L0P7Y0              	100.00%		F1RVQ5              	100.00%
                    	       		F1SSJ8              	57.58%
                    	       		F1RMT5              	9.95%
                    	       		F1RQH3              	9.80%
                    	       		F1S1M8              	9.20%
                    	       		I3LH80              	9.05%
                    	       		I3LS77              	8.45%
Bootstrap support for L0P7Y0 as seed ortholog is 100%.
Bootstrap support for F1RVQ5 as seed ortholog is 100%.

Group of orthologs #969. Best score 130 bits
Score difference with first non-orthologous sequence - P.jiroveci:130 S.scrofa:130

L0PGC9              	100.00%		F2Z548              	100.00%
                    	       		F1RXU4              	82.61%
                    	       		F1SPJ4              	81.52%
                    	       		I3L5D7              	75.54%
Bootstrap support for L0PGC9 as seed ortholog is 100%.
Bootstrap support for F2Z548 as seed ortholog is 100%.

Group of orthologs #970. Best score 130 bits
Score difference with first non-orthologous sequence - P.jiroveci:130 S.scrofa:130

L0P8K4              	100.00%		I3LVG4              	100.00%
                    	       		I3LDV8              	36.00%
                    	       		F1RL94              	11.67%
Bootstrap support for L0P8K4 as seed ortholog is 100%.
Bootstrap support for I3LVG4 as seed ortholog is 100%.

Group of orthologs #971. Best score 130 bits
Score difference with first non-orthologous sequence - P.jiroveci:130 S.scrofa:130

L0PAW6              	100.00%		F1SF56              	100.00%
                    	       		F1RSM7              	13.88%
Bootstrap support for L0PAW6 as seed ortholog is 100%.
Bootstrap support for F1SF56 as seed ortholog is 100%.

Group of orthologs #972. Best score 130 bits
Score difference with first non-orthologous sequence - P.jiroveci:130 S.scrofa:130

L0PEV4              	100.00%		F1RX78              	100.00%
Bootstrap support for L0PEV4 as seed ortholog is 100%.
Bootstrap support for F1RX78 as seed ortholog is 100%.

Group of orthologs #973. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 S.scrofa:48

L0P9Q9              	100.00%		F1SJF6              	100.00%
                    	       		F1SL44              	8.58%
                    	       		I3LVN3              	5.49%
Bootstrap support for L0P9Q9 as seed ortholog is 100%.
Bootstrap support for F1SJF6 as seed ortholog is 96%.

Group of orthologs #974. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 S.scrofa:129

L0PFZ7              	100.00%		F1SSB0              	100.00%
                    	       		I3L5V4              	84.33%
                    	       		F1RG77              	52.82%
Bootstrap support for L0PFZ7 as seed ortholog is 100%.
Bootstrap support for F1SSB0 as seed ortholog is 100%.

Group of orthologs #975. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 S.scrofa:129

L0PDZ4              	100.00%		F1SGZ8              	100.00%
                    	       		F1SIX7              	61.53%
Bootstrap support for L0PDZ4 as seed ortholog is 100%.
Bootstrap support for F1SGZ8 as seed ortholog is 100%.

Group of orthologs #976. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 S.scrofa:129

L0P849              	100.00%		F1RPH1              	100.00%
Bootstrap support for L0P849 as seed ortholog is 100%.
Bootstrap support for F1RPH1 as seed ortholog is 100%.

Group of orthologs #977. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 S.scrofa:129

L0P9F2              	100.00%		F1RQ93              	100.00%
Bootstrap support for L0P9F2 as seed ortholog is 100%.
Bootstrap support for F1RQ93 as seed ortholog is 100%.

Group of orthologs #978. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 S.scrofa:129

L0P9M3              	100.00%		F1RZD9              	100.00%
Bootstrap support for L0P9M3 as seed ortholog is 100%.
Bootstrap support for F1RZD9 as seed ortholog is 100%.

Group of orthologs #979. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 S.scrofa:129

L0P6Q5              	100.00%		F1SDB6              	100.00%
Bootstrap support for L0P6Q5 as seed ortholog is 100%.
Bootstrap support for F1SDB6 as seed ortholog is 100%.

Group of orthologs #980. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 S.scrofa:129

L0PFV4              	100.00%		F1SAR5              	100.00%
Bootstrap support for L0PFV4 as seed ortholog is 100%.
Bootstrap support for F1SAR5 as seed ortholog is 100%.

Group of orthologs #981. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 S.scrofa:129

L0PDM9              	100.00%		I3L5Z6              	100.00%
Bootstrap support for L0PDM9 as seed ortholog is 100%.
Bootstrap support for I3L5Z6 as seed ortholog is 100%.

Group of orthologs #982. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 S.scrofa:128

L0P940              	100.00%		P62901              	100.00%
                    	       		F1SLI2              	68.80%
                    	       		F1SRB7              	68.00%
                    	       		F1SH66              	63.20%
Bootstrap support for L0P940 as seed ortholog is 100%.
Bootstrap support for P62901 as seed ortholog is 100%.

Group of orthologs #983. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:19 S.scrofa:38

L0PGL7              	100.00%		F1SS32              	100.00%
                    	       		I3LSG7              	70.86%
                    	       		I3LQ40              	21.41%
Bootstrap support for L0PGL7 as seed ortholog is 77%.
Bootstrap support for F1SS32 as seed ortholog is 93%.

Group of orthologs #984. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 S.scrofa:128

L0PG87              	100.00%		F2Z5N5              	100.00%
                    	       		I3L7Y1              	100.00%
                    	       		I3LHP3              	46.30%
Bootstrap support for L0PG87 as seed ortholog is 100%.
Bootstrap support for F2Z5N5 as seed ortholog is 100%.
Bootstrap support for I3L7Y1 as seed ortholog is 100%.

Group of orthologs #985. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 S.scrofa:128

L0PD60              	100.00%		F1S399              	100.00%
Bootstrap support for L0PD60 as seed ortholog is 100%.
Bootstrap support for F1S399 as seed ortholog is 100%.

Group of orthologs #986. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 S.scrofa:128

L0PFV3              	100.00%		I3LLC8              	100.00%
Bootstrap support for L0PFV3 as seed ortholog is 100%.
Bootstrap support for I3LLC8 as seed ortholog is 100%.

Group of orthologs #987. Best score 127 bits
Score difference with first non-orthologous sequence - P.jiroveci:127 S.scrofa:127

L0PBR1              	100.00%		Q29315              	100.00%
                    	       		F1RNZ2              	65.12%
Bootstrap support for L0PBR1 as seed ortholog is 100%.
Bootstrap support for Q29315 as seed ortholog is 100%.

Group of orthologs #988. Best score 127 bits
Score difference with first non-orthologous sequence - P.jiroveci:127 S.scrofa:127

L0PFM7              	100.00%		F1S1X9              	100.00%
Bootstrap support for L0PFM7 as seed ortholog is 100%.
Bootstrap support for F1S1X9 as seed ortholog is 100%.

Group of orthologs #989. Best score 127 bits
Score difference with first non-orthologous sequence - P.jiroveci:127 S.scrofa:127

L0PAZ1              	100.00%		F1SKN8              	100.00%
Bootstrap support for L0PAZ1 as seed ortholog is 100%.
Bootstrap support for F1SKN8 as seed ortholog is 100%.

Group of orthologs #990. Best score 126 bits
Score difference with first non-orthologous sequence - P.jiroveci:126 S.scrofa:126

L0PA43              	100.00%		I3LHT9              	100.00%
                    	       		F1S3P8              	36.48%
Bootstrap support for L0PA43 as seed ortholog is 100%.
Bootstrap support for I3LHT9 as seed ortholog is 100%.

Group of orthologs #991. Best score 126 bits
Score difference with first non-orthologous sequence - P.jiroveci:126 S.scrofa:126

L0P8D7              	100.00%		I3LS24              	100.00%
                    	       		F1STS9              	89.35%
Bootstrap support for L0P8D7 as seed ortholog is 100%.
Bootstrap support for I3LS24 as seed ortholog is 100%.

Group of orthologs #992. Best score 126 bits
Score difference with first non-orthologous sequence - P.jiroveci:126 S.scrofa:126

L0PF65              	100.00%		F1RWH7              	100.00%
Bootstrap support for L0PF65 as seed ortholog is 100%.
Bootstrap support for F1RWH7 as seed ortholog is 100%.

Group of orthologs #993. Best score 126 bits
Score difference with first non-orthologous sequence - P.jiroveci:126 S.scrofa:126

L0PB66              	100.00%		F1SB47              	100.00%
Bootstrap support for L0PB66 as seed ortholog is 100%.
Bootstrap support for F1SB47 as seed ortholog is 100%.

Group of orthologs #994. Best score 126 bits
Score difference with first non-orthologous sequence - P.jiroveci:126 S.scrofa:81

L0P9L0              	100.00%		F2Z4X7              	100.00%
Bootstrap support for L0P9L0 as seed ortholog is 100%.
Bootstrap support for F2Z4X7 as seed ortholog is 99%.

Group of orthologs #995. Best score 126 bits
Score difference with first non-orthologous sequence - P.jiroveci:126 S.scrofa:126

L0PGL6              	100.00%		I3L9W8              	100.00%
Bootstrap support for L0PGL6 as seed ortholog is 100%.
Bootstrap support for I3L9W8 as seed ortholog is 100%.

Group of orthologs #996. Best score 126 bits
Score difference with first non-orthologous sequence - P.jiroveci:126 S.scrofa:126

L0P9I2              	100.00%		I3LRF1              	100.00%
Bootstrap support for L0P9I2 as seed ortholog is 100%.
Bootstrap support for I3LRF1 as seed ortholog is 100%.

Group of orthologs #997. Best score 126 bits
Score difference with first non-orthologous sequence - P.jiroveci:126 S.scrofa:126

L0PCZ0              	100.00%		I3LN62              	100.00%
Bootstrap support for L0PCZ0 as seed ortholog is 100%.
Bootstrap support for I3LN62 as seed ortholog is 100%.

Group of orthologs #998. Best score 125 bits
Score difference with first non-orthologous sequence - P.jiroveci:125 S.scrofa:125

L0PEP9              	100.00%		P61220              	100.00%
                    	       		F2Z553              	88.79%
Bootstrap support for L0PEP9 as seed ortholog is 100%.
Bootstrap support for P61220 as seed ortholog is 100%.

Group of orthologs #999. Best score 125 bits
Score difference with first non-orthologous sequence - P.jiroveci:125 S.scrofa:125

L0PA97              	100.00%		I3L933              	100.00%
Bootstrap support for L0PA97 as seed ortholog is 100%.
Bootstrap support for I3L933 as seed ortholog is 100%.

Group of orthologs #1000. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 S.scrofa:124

L0PA35              	100.00%		I3LD55              	100.00%
                    	       		F1RXY4              	54.45%
Bootstrap support for L0PA35 as seed ortholog is 100%.
Bootstrap support for I3LD55 as seed ortholog is 100%.

Group of orthologs #1001. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 S.scrofa:124

L0PDE5              	100.00%		F1RGW4              	100.00%
Bootstrap support for L0PDE5 as seed ortholog is 100%.
Bootstrap support for F1RGW4 as seed ortholog is 100%.

Group of orthologs #1002. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 S.scrofa:124

L0PFD1              	100.00%		D0G6R6              	100.00%
Bootstrap support for L0PFD1 as seed ortholog is 100%.
Bootstrap support for D0G6R6 as seed ortholog is 100%.

Group of orthologs #1003. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 S.scrofa:124

L0PFZ3              	100.00%		B4F450              	100.00%
Bootstrap support for L0PFZ3 as seed ortholog is 100%.
Bootstrap support for B4F450 as seed ortholog is 100%.

Group of orthologs #1004. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 S.scrofa:124

L0PG46              	100.00%		F1S4I4              	100.00%
Bootstrap support for L0PG46 as seed ortholog is 100%.
Bootstrap support for F1S4I4 as seed ortholog is 100%.

Group of orthologs #1005. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 S.scrofa:124

L0PBK8              	100.00%		F1SBC5              	100.00%
Bootstrap support for L0PBK8 as seed ortholog is 100%.
Bootstrap support for F1SBC5 as seed ortholog is 100%.

Group of orthologs #1006. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 S.scrofa:124

L0PB27              	100.00%		I3LCU8              	100.00%
Bootstrap support for L0PB27 as seed ortholog is 100%.
Bootstrap support for I3LCU8 as seed ortholog is 100%.

Group of orthologs #1007. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 S.scrofa:124

L0PFP3              	100.00%		I3LF90              	100.00%
Bootstrap support for L0PFP3 as seed ortholog is 100%.
Bootstrap support for I3LF90 as seed ortholog is 100%.

Group of orthologs #1008. Best score 123 bits
Score difference with first non-orthologous sequence - P.jiroveci:123 S.scrofa:28

L0PDL7              	100.00%		F1SRP6              	100.00%
                    	       		F2Z5W1              	15.85%
Bootstrap support for L0PDL7 as seed ortholog is 100%.
Bootstrap support for F1SRP6 as seed ortholog is 94%.

Group of orthologs #1009. Best score 123 bits
Score difference with first non-orthologous sequence - P.jiroveci:123 S.scrofa:123

L0PBU1              	100.00%		F2Z596              	100.00%
                    	       		F1RT25              	32.54%
Bootstrap support for L0PBU1 as seed ortholog is 100%.
Bootstrap support for F2Z596 as seed ortholog is 100%.

Group of orthologs #1010. Best score 123 bits
Score difference with first non-orthologous sequence - P.jiroveci:123 S.scrofa:123

L0PIQ9              	100.00%		I3LTN7              	100.00%
                    	       		I3LAS0              	98.34%
Bootstrap support for L0PIQ9 as seed ortholog is 100%.
Bootstrap support for I3LTN7 as seed ortholog is 100%.

Group of orthologs #1011. Best score 123 bits
Score difference with first non-orthologous sequence - P.jiroveci:123 S.scrofa:36

L0PGC0              	100.00%		F1SH74              	100.00%
Bootstrap support for L0PGC0 as seed ortholog is 100%.
Bootstrap support for F1SH74 as seed ortholog is 88%.

Group of orthologs #1012. Best score 123 bits
Score difference with first non-orthologous sequence - P.jiroveci:123 S.scrofa:123

L0PDN3              	100.00%		I3L7M3              	100.00%
Bootstrap support for L0PDN3 as seed ortholog is 100%.
Bootstrap support for I3L7M3 as seed ortholog is 100%.

Group of orthologs #1013. Best score 123 bits
Score difference with first non-orthologous sequence - P.jiroveci:123 S.scrofa:123

L0PCB4              	100.00%		I3LSY9              	100.00%
Bootstrap support for L0PCB4 as seed ortholog is 100%.
Bootstrap support for I3LSY9 as seed ortholog is 100%.

Group of orthologs #1014. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 S.scrofa:62

L0P838              	100.00%		F1RG49              	100.00%
Bootstrap support for L0P838 as seed ortholog is 100%.
Bootstrap support for F1RG49 as seed ortholog is 96%.

Group of orthologs #1015. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 S.scrofa:122

L0PFR7              	100.00%		F1RF43              	100.00%
Bootstrap support for L0PFR7 as seed ortholog is 100%.
Bootstrap support for F1RF43 as seed ortholog is 100%.

Group of orthologs #1016. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 S.scrofa:122

L0PFD0              	100.00%		F1RZ16              	100.00%
Bootstrap support for L0PFD0 as seed ortholog is 100%.
Bootstrap support for F1RZ16 as seed ortholog is 100%.

Group of orthologs #1017. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 S.scrofa:122

L0PH76              	100.00%		F1S8T4              	100.00%
Bootstrap support for L0PH76 as seed ortholog is 100%.
Bootstrap support for F1S8T4 as seed ortholog is 100%.

Group of orthologs #1018. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 S.scrofa:122

L0PEZ7              	100.00%		F2Z5R8              	100.00%
Bootstrap support for L0PEZ7 as seed ortholog is 100%.
Bootstrap support for F2Z5R8 as seed ortholog is 100%.

Group of orthologs #1019. Best score 121 bits
Score difference with first non-orthologous sequence - P.jiroveci:121 S.scrofa:121

L0P816              	100.00%		F1RMU2              	100.00%
                    	       		F1S1L2              	45.09%
                    	       		I3LGW7              	39.47%
Bootstrap support for L0P816 as seed ortholog is 100%.
Bootstrap support for F1RMU2 as seed ortholog is 100%.

Group of orthologs #1020. Best score 121 bits
Score difference with first non-orthologous sequence - P.jiroveci:121 S.scrofa:121

L0PD24              	100.00%		I3LDM3              	100.00%
                    	       		F1SGB6              	57.08%
Bootstrap support for L0PD24 as seed ortholog is 100%.
Bootstrap support for I3LDM3 as seed ortholog is 100%.

Group of orthologs #1021. Best score 121 bits
Score difference with first non-orthologous sequence - P.jiroveci:39 S.scrofa:121

L0P752              	100.00%		F1RUL1              	100.00%
Bootstrap support for L0P752 as seed ortholog is 92%.
Bootstrap support for F1RUL1 as seed ortholog is 100%.

Group of orthologs #1022. Best score 121 bits
Score difference with first non-orthologous sequence - P.jiroveci:121 S.scrofa:121

L0PC08              	100.00%		F1RNR7              	100.00%
Bootstrap support for L0PC08 as seed ortholog is 100%.
Bootstrap support for F1RNR7 as seed ortholog is 100%.

Group of orthologs #1023. Best score 121 bits
Score difference with first non-orthologous sequence - P.jiroveci:121 S.scrofa:121

L0PF16              	100.00%		K7GKT6              	100.00%
Bootstrap support for L0PF16 as seed ortholog is 100%.
Bootstrap support for K7GKT6 as seed ortholog is 100%.

Group of orthologs #1024. Best score 120 bits
Score difference with first non-orthologous sequence - P.jiroveci:120 S.scrofa:120

L0PAM9              	100.00%		I3LPH5              	100.00%
                    	       		F1RQB6              	48.19%
Bootstrap support for L0PAM9 as seed ortholog is 100%.
Bootstrap support for I3LPH5 as seed ortholog is 100%.

Group of orthologs #1025. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 S.scrofa:119

L0PA90              	100.00%		F1RKG1              	100.00%
                    	       		F1RJ53              	39.11%
                    	       		O19004              	5.81%
Bootstrap support for L0PA90 as seed ortholog is 100%.
Bootstrap support for F1RKG1 as seed ortholog is 100%.

Group of orthologs #1026. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 S.scrofa:119

L0PG04              	100.00%		F1SDE9              	100.00%
                    	       		I3LFM2              	38.08%
                    	       		I3LSV9              	37.75%
Bootstrap support for L0PG04 as seed ortholog is 100%.
Bootstrap support for F1SDE9 as seed ortholog is 100%.

Group of orthologs #1027. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 S.scrofa:119

L0PC89              	100.00%		A5A8Y7              	100.00%
                    	       		F1RWN0              	19.15%
Bootstrap support for L0PC89 as seed ortholog is 100%.
Bootstrap support for A5A8Y7 as seed ortholog is 100%.

Group of orthologs #1028. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 S.scrofa:15

L0PF05              	100.00%		F1RHI9              	100.00%
                    	       		F1SRT3              	19.16%
Bootstrap support for L0PF05 as seed ortholog is 100%.
Bootstrap support for F1RHI9 as seed ortholog is 71%.
Alternative seed ortholog is Q66UW5 (15 bits away from this cluster)

Group of orthologs #1029. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 S.scrofa:119

L0P9V3              	100.00%		F1RGA7              	100.00%
Bootstrap support for L0P9V3 as seed ortholog is 100%.
Bootstrap support for F1RGA7 as seed ortholog is 100%.

Group of orthologs #1030. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 S.scrofa:119

L0PD37              	100.00%		F1RFE3              	100.00%
Bootstrap support for L0PD37 as seed ortholog is 100%.
Bootstrap support for F1RFE3 as seed ortholog is 100%.

Group of orthologs #1031. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 S.scrofa:119

L0PCI9              	100.00%		Q2EN81              	100.00%
Bootstrap support for L0PCI9 as seed ortholog is 100%.
Bootstrap support for Q2EN81 as seed ortholog is 100%.

Group of orthologs #1032. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 S.scrofa:118

L0P9A7              	100.00%		F2Z5S4              	100.00%
                    	       		I3LUB7              	35.63%
Bootstrap support for L0P9A7 as seed ortholog is 100%.
Bootstrap support for F2Z5S4 as seed ortholog is 100%.

Group of orthologs #1033. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 S.scrofa:118

L0PD00              	100.00%		F1RZ28              	100.00%
Bootstrap support for L0PD00 as seed ortholog is 100%.
Bootstrap support for F1RZ28 as seed ortholog is 100%.

Group of orthologs #1034. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 S.scrofa:118

L0P935              	100.00%		I3L6I8              	100.00%
Bootstrap support for L0P935 as seed ortholog is 100%.
Bootstrap support for I3L6I8 as seed ortholog is 100%.

Group of orthologs #1035. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 S.scrofa:118

L0PF91              	100.00%		I3LBU2              	100.00%
Bootstrap support for L0PF91 as seed ortholog is 100%.
Bootstrap support for I3LBU2 as seed ortholog is 100%.

Group of orthologs #1036. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 S.scrofa:118

L0PGF6              	100.00%		I3LDF9              	100.00%
Bootstrap support for L0PGF6 as seed ortholog is 100%.
Bootstrap support for I3LDF9 as seed ortholog is 100%.

Group of orthologs #1037. Best score 117 bits
Score difference with first non-orthologous sequence - P.jiroveci:117 S.scrofa:117

L0P990              	100.00%		F1S4Z2              	100.00%
                    	       		I3LG19              	28.48%
Bootstrap support for L0P990 as seed ortholog is 100%.
Bootstrap support for F1S4Z2 as seed ortholog is 100%.

Group of orthologs #1038. Best score 117 bits
Score difference with first non-orthologous sequence - P.jiroveci:117 S.scrofa:117

L0PBH3              	100.00%		I3LIR5              	100.00%
                    	       		I3LBL4              	44.27%
Bootstrap support for L0PBH3 as seed ortholog is 100%.
Bootstrap support for I3LIR5 as seed ortholog is 100%.

Group of orthologs #1039. Best score 117 bits
Score difference with first non-orthologous sequence - P.jiroveci:117 S.scrofa:117

L0PCX0              	100.00%		F1SV29              	100.00%
Bootstrap support for L0PCX0 as seed ortholog is 100%.
Bootstrap support for F1SV29 as seed ortholog is 100%.

Group of orthologs #1040. Best score 117 bits
Score difference with first non-orthologous sequence - P.jiroveci:117 S.scrofa:117

L0P9E1              	100.00%		I3LHP7              	100.00%
Bootstrap support for L0P9E1 as seed ortholog is 100%.
Bootstrap support for I3LHP7 as seed ortholog is 100%.

Group of orthologs #1041. Best score 116 bits
Score difference with first non-orthologous sequence - P.jiroveci:25 S.scrofa:4

L0PAR1              	100.00%		F1RSR2              	100.00%
                    	       		I3LPB4              	100.00%
                    	       		I3LQF1              	60.87%
                    	       		F1S9J0              	28.54%
                    	       		F1SMG7              	24.40%
                    	       		I3L5P6              	23.75%
                    	       		F1RK80              	16.12%
                    	       		F1RK79              	13.94%
                    	       		I3L7T3              	12.20%
                    	       		I3LBP5              	10.87%
                    	       		F1S6Q0              	9.80%
                    	       		F1RG75              	9.59%
                    	       		I3LBD3              	8.06%
Bootstrap support for L0PAR1 as seed ortholog is 76%.
Bootstrap support for F1RSR2 as seed ortholog is 56%.
Alternative seed ortholog is F1S774 (4 bits away from this cluster)
Bootstrap support for I3LPB4 as seed ortholog is 56%.
Alternative seed ortholog is F1S774 (4 bits away from this cluster)

Group of orthologs #1042. Best score 116 bits
Score difference with first non-orthologous sequence - P.jiroveci:116 S.scrofa:116

L0PGB6              	100.00%		F1RIM1              	100.00%
L0PG66              	85.14%		
Bootstrap support for L0PGB6 as seed ortholog is 100%.
Bootstrap support for F1RIM1 as seed ortholog is 100%.

Group of orthologs #1043. Best score 116 bits
Score difference with first non-orthologous sequence - P.jiroveci:116 S.scrofa:27

L0PAF2              	100.00%		C3RZA1              	100.00%
Bootstrap support for L0PAF2 as seed ortholog is 100%.
Bootstrap support for C3RZA1 as seed ortholog is 79%.

Group of orthologs #1044. Best score 116 bits
Score difference with first non-orthologous sequence - P.jiroveci:116 S.scrofa:116

L0P8L2              	100.00%		F1RR97              	100.00%
Bootstrap support for L0P8L2 as seed ortholog is 100%.
Bootstrap support for F1RR97 as seed ortholog is 100%.

Group of orthologs #1045. Best score 116 bits
Score difference with first non-orthologous sequence - P.jiroveci:116 S.scrofa:116

L0PCT7              	100.00%		F1S1V1              	100.00%
Bootstrap support for L0PCT7 as seed ortholog is 100%.
Bootstrap support for F1S1V1 as seed ortholog is 100%.

Group of orthologs #1046. Best score 116 bits
Score difference with first non-orthologous sequence - P.jiroveci:116 S.scrofa:116

L0PHM1              	100.00%		Q29036              	100.00%
Bootstrap support for L0PHM1 as seed ortholog is 100%.
Bootstrap support for Q29036 as seed ortholog is 100%.

Group of orthologs #1047. Best score 115 bits
Score difference with first non-orthologous sequence - P.jiroveci:115 S.scrofa:115

L0PBW0              	100.00%		F1RI50              	100.00%
                    	       		F1S012              	41.89%
Bootstrap support for L0PBW0 as seed ortholog is 100%.
Bootstrap support for F1RI50 as seed ortholog is 100%.

Group of orthologs #1048. Best score 115 bits
Score difference with first non-orthologous sequence - P.jiroveci:115 S.scrofa:115

L0PE35              	100.00%		F1RNY8              	100.00%
Bootstrap support for L0PE35 as seed ortholog is 100%.
Bootstrap support for F1RNY8 as seed ortholog is 100%.

Group of orthologs #1049. Best score 115 bits
Score difference with first non-orthologous sequence - P.jiroveci:115 S.scrofa:115

L0PCY1              	100.00%		F1RSM9              	100.00%
Bootstrap support for L0PCY1 as seed ortholog is 100%.
Bootstrap support for F1RSM9 as seed ortholog is 100%.

Group of orthologs #1050. Best score 115 bits
Score difference with first non-orthologous sequence - P.jiroveci:115 S.scrofa:115

L0PA59              	100.00%		F1SEH0              	100.00%
Bootstrap support for L0PA59 as seed ortholog is 100%.
Bootstrap support for F1SEH0 as seed ortholog is 100%.

Group of orthologs #1051. Best score 114 bits
Score difference with first non-orthologous sequence - P.jiroveci:40 S.scrofa:53

L0P982              	100.00%		F1SA23              	100.00%
                    	       		F1SA24              	63.08%
                    	       		F1SCT9              	31.54%
Bootstrap support for L0P982 as seed ortholog is 87%.
Bootstrap support for F1SA23 as seed ortholog is 93%.

Group of orthologs #1052. Best score 114 bits
Score difference with first non-orthologous sequence - P.jiroveci:114 S.scrofa:114

L0PFW3              	100.00%		F1RG40              	100.00%
Bootstrap support for L0PFW3 as seed ortholog is 100%.
Bootstrap support for F1RG40 as seed ortholog is 100%.

Group of orthologs #1053. Best score 114 bits
Score difference with first non-orthologous sequence - P.jiroveci:114 S.scrofa:114

L0PG16              	100.00%		F1SIV7              	100.00%
Bootstrap support for L0PG16 as seed ortholog is 100%.
Bootstrap support for F1SIV7 as seed ortholog is 100%.

Group of orthologs #1054. Best score 113 bits
Score difference with first non-orthologous sequence - P.jiroveci:113 S.scrofa:14

L0P9W8              	100.00%		F1S8U2              	100.00%
L0PH99              	63.42%		I3LDX6              	11.91%
Bootstrap support for L0P9W8 as seed ortholog is 100%.
Bootstrap support for F1S8U2 as seed ortholog is 63%.
Alternative seed ortholog is F1SNL9 (14 bits away from this cluster)

Group of orthologs #1055. Best score 113 bits
Score difference with first non-orthologous sequence - P.jiroveci:113 S.scrofa:113

L0PGM7              	100.00%		F1S1J8              	100.00%
L0PGY6              	94.75%		
Bootstrap support for L0PGM7 as seed ortholog is 100%.
Bootstrap support for F1S1J8 as seed ortholog is 100%.

Group of orthologs #1056. Best score 113 bits
Score difference with first non-orthologous sequence - P.jiroveci:113 S.scrofa:113

L0PBK0              	100.00%		F2Z551              	100.00%
                    	       		F1SKC0              	23.33%
Bootstrap support for L0PBK0 as seed ortholog is 100%.
Bootstrap support for F2Z551 as seed ortholog is 100%.

Group of orthologs #1057. Best score 113 bits
Score difference with first non-orthologous sequence - P.jiroveci:113 S.scrofa:113

L0PAG8              	100.00%		F1SAZ6              	100.00%
Bootstrap support for L0PAG8 as seed ortholog is 100%.
Bootstrap support for F1SAZ6 as seed ortholog is 100%.

Group of orthologs #1058. Best score 113 bits
Score difference with first non-orthologous sequence - P.jiroveci:113 S.scrofa:113

L0PIT4              	100.00%		F1S7A5              	100.00%
Bootstrap support for L0PIT4 as seed ortholog is 100%.
Bootstrap support for F1S7A5 as seed ortholog is 100%.

Group of orthologs #1059. Best score 113 bits
Score difference with first non-orthologous sequence - P.jiroveci:113 S.scrofa:39

L0P9W5              	100.00%		F1SN01              	100.00%
Bootstrap support for L0P9W5 as seed ortholog is 100%.
Bootstrap support for F1SN01 as seed ortholog is 78%.

Group of orthologs #1060. Best score 113 bits
Score difference with first non-orthologous sequence - P.jiroveci:113 S.scrofa:113

L0P8G7              	100.00%		I3LLA0              	100.00%
Bootstrap support for L0P8G7 as seed ortholog is 100%.
Bootstrap support for I3LLA0 as seed ortholog is 100%.

Group of orthologs #1061. Best score 113 bits
Score difference with first non-orthologous sequence - P.jiroveci:113 S.scrofa:18

L0PF58              	100.00%		P36968              	100.00%
Bootstrap support for L0PF58 as seed ortholog is 100%.
Bootstrap support for P36968 as seed ortholog is 72%.
Alternative seed ortholog is O18994 (18 bits away from this cluster)

Group of orthologs #1062. Best score 112 bits
Score difference with first non-orthologous sequence - P.jiroveci:112 S.scrofa:112

L0PEW9              	100.00%		F1RZU5              	100.00%
                    	       		K7GN24              	43.37%
Bootstrap support for L0PEW9 as seed ortholog is 100%.
Bootstrap support for F1RZU5 as seed ortholog is 100%.

Group of orthologs #1063. Best score 112 bits
Score difference with first non-orthologous sequence - P.jiroveci:112 S.scrofa:112

L0PCK2              	100.00%		F1SAB8              	100.00%
Bootstrap support for L0PCK2 as seed ortholog is 100%.
Bootstrap support for F1SAB8 as seed ortholog is 100%.

Group of orthologs #1064. Best score 112 bits
Score difference with first non-orthologous sequence - P.jiroveci:58 S.scrofa:30

L0PD63              	100.00%		I3L574              	100.00%
Bootstrap support for L0PD63 as seed ortholog is 99%.
Bootstrap support for I3L574 as seed ortholog is 91%.

Group of orthologs #1065. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 S.scrofa:111

L0PD39              	100.00%		F1RUJ0              	100.00%
                    	       		I3LJT3              	67.88%
                    	       		P40125              	8.03%
Bootstrap support for L0PD39 as seed ortholog is 100%.
Bootstrap support for F1RUJ0 as seed ortholog is 100%.

Group of orthologs #1066. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 S.scrofa:54

L0P8J9              	100.00%		F1SNA5              	100.00%
                    	       		F1S551              	40.18%
                    	       		I3LKT4              	20.97%
Bootstrap support for L0P8J9 as seed ortholog is 100%.
Bootstrap support for F1SNA5 as seed ortholog is 94%.

Group of orthologs #1067. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 S.scrofa:111

L0PG76              	100.00%		F1RPW8              	100.00%
L0PE70              	59.33%		
Bootstrap support for L0PG76 as seed ortholog is 100%.
Bootstrap support for F1RPW8 as seed ortholog is 100%.

Group of orthologs #1068. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 S.scrofa:111

L0PFV9              	100.00%		I3L9R9              	100.00%
                    	       		F1RMZ0              	24.27%
Bootstrap support for L0PFV9 as seed ortholog is 100%.
Bootstrap support for I3L9R9 as seed ortholog is 100%.

Group of orthologs #1069. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 S.scrofa:111

L0PEF4              	100.00%		C9K506              	100.00%
Bootstrap support for L0PEF4 as seed ortholog is 100%.
Bootstrap support for C9K506 as seed ortholog is 100%.

Group of orthologs #1070. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 S.scrofa:111

L0P6Z5              	100.00%		F1RSG8              	100.00%
Bootstrap support for L0P6Z5 as seed ortholog is 100%.
Bootstrap support for F1RSG8 as seed ortholog is 100%.

Group of orthologs #1071. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 S.scrofa:51

L0PFE7              	100.00%		F1RJC5              	100.00%
Bootstrap support for L0PFE7 as seed ortholog is 100%.
Bootstrap support for F1RJC5 as seed ortholog is 77%.

Group of orthologs #1072. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 S.scrofa:111

L0PD19              	100.00%		F1S8H0              	100.00%
Bootstrap support for L0PD19 as seed ortholog is 100%.
Bootstrap support for F1S8H0 as seed ortholog is 100%.

Group of orthologs #1073. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 S.scrofa:111

L0P9W6              	100.00%		I3LGQ4              	100.00%
Bootstrap support for L0P9W6 as seed ortholog is 100%.
Bootstrap support for I3LGQ4 as seed ortholog is 100%.

Group of orthologs #1074. Best score 110 bits
Score difference with first non-orthologous sequence - P.jiroveci:110 S.scrofa:110

L0PCZ2              	100.00%		P67985              	100.00%
                    	       		I3LP62              	41.89%
                    	       		F1RPY4              	39.19%
Bootstrap support for L0PCZ2 as seed ortholog is 100%.
Bootstrap support for P67985 as seed ortholog is 100%.

Group of orthologs #1075. Best score 110 bits
Score difference with first non-orthologous sequence - P.jiroveci:110 S.scrofa:110

L0P7N9              	100.00%		I3LG73              	100.00%
Bootstrap support for L0P7N9 as seed ortholog is 100%.
Bootstrap support for I3LG73 as seed ortholog is 100%.

Group of orthologs #1076. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 S.scrofa:109

L0P8T2              	100.00%		F1RSH0              	100.00%
L0PA19              	81.36%		
Bootstrap support for L0P8T2 as seed ortholog is 100%.
Bootstrap support for F1RSH0 as seed ortholog is 100%.

Group of orthologs #1077. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 S.scrofa:109

L0PF86              	100.00%		F1S765              	100.00%
L0PC10              	85.34%		
Bootstrap support for L0PF86 as seed ortholog is 100%.
Bootstrap support for F1S765 as seed ortholog is 100%.

Group of orthologs #1078. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 S.scrofa:109

L0PFG4              	100.00%		F1SMN6              	100.00%
L0P939              	37.26%		
Bootstrap support for L0PFG4 as seed ortholog is 100%.
Bootstrap support for F1SMN6 as seed ortholog is 100%.

Group of orthologs #1079. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 S.scrofa:26

L0PBU9              	100.00%		Q2VTP6              	100.00%
                    	       		F2Z5F0              	77.39%
Bootstrap support for L0PBU9 as seed ortholog is 100%.
Bootstrap support for Q2VTP6 as seed ortholog is 96%.

Group of orthologs #1080. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 S.scrofa:109

L0PF00              	100.00%		F1S0S6              	100.00%
Bootstrap support for L0PF00 as seed ortholog is 100%.
Bootstrap support for F1S0S6 as seed ortholog is 100%.

Group of orthologs #1081. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 S.scrofa:109

L0PHQ1              	100.00%		F1S6I3              	100.00%
Bootstrap support for L0PHQ1 as seed ortholog is 100%.
Bootstrap support for F1S6I3 as seed ortholog is 100%.

Group of orthologs #1082. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 S.scrofa:109

L0PIR4              	100.00%		F1S718              	100.00%
Bootstrap support for L0PIR4 as seed ortholog is 100%.
Bootstrap support for F1S718 as seed ortholog is 100%.

Group of orthologs #1083. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 S.scrofa:109

L0PAK9              	100.00%		I3LJZ5              	100.00%
Bootstrap support for L0PAK9 as seed ortholog is 100%.
Bootstrap support for I3LJZ5 as seed ortholog is 100%.

Group of orthologs #1084. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 S.scrofa:63

L0PEE1              	100.00%		I3LKP2              	100.00%
Bootstrap support for L0PEE1 as seed ortholog is 100%.
Bootstrap support for I3LKP2 as seed ortholog is 100%.

Group of orthologs #1085. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 S.scrofa:109

L0PD77              	100.00%		P28768              	100.00%
Bootstrap support for L0PD77 as seed ortholog is 100%.
Bootstrap support for P28768 as seed ortholog is 100%.

Group of orthologs #1086. Best score 108 bits
Score difference with first non-orthologous sequence - P.jiroveci:108 S.scrofa:13

L0P984              	100.00%		B7U2H0              	100.00%
                    	       		D0G0C1              	100.00%
Bootstrap support for L0P984 as seed ortholog is 100%.
Bootstrap support for B7U2H0 as seed ortholog is 65%.
Alternative seed ortholog is B8XTR3 (13 bits away from this cluster)
Bootstrap support for D0G0C1 as seed ortholog is 68%.
Alternative seed ortholog is B8XTR3 (13 bits away from this cluster)

Group of orthologs #1087. Best score 108 bits
Score difference with first non-orthologous sequence - P.jiroveci:108 S.scrofa:52

L0PCL8              	100.00%		F1S5P2              	100.00%
                    	       		F1RKG9              	5.23%
Bootstrap support for L0PCL8 as seed ortholog is 100%.
Bootstrap support for F1S5P2 as seed ortholog is 69%.
Alternative seed ortholog is F1S066 (52 bits away from this cluster)

Group of orthologs #1088. Best score 108 bits
Score difference with first non-orthologous sequence - P.jiroveci:108 S.scrofa:108

L0PFF4              	100.00%		F1S7W2              	100.00%
Bootstrap support for L0PFF4 as seed ortholog is 100%.
Bootstrap support for F1S7W2 as seed ortholog is 100%.

Group of orthologs #1089. Best score 108 bits
Score difference with first non-orthologous sequence - P.jiroveci:108 S.scrofa:108

L0PCT2              	100.00%		F1SPI0              	100.00%
Bootstrap support for L0PCT2 as seed ortholog is 100%.
Bootstrap support for F1SPI0 as seed ortholog is 100%.

Group of orthologs #1090. Best score 108 bits
Score difference with first non-orthologous sequence - P.jiroveci:108 S.scrofa:108

L0PDW8              	100.00%		I3LFB6              	100.00%
Bootstrap support for L0PDW8 as seed ortholog is 100%.
Bootstrap support for I3LFB6 as seed ortholog is 100%.

Group of orthologs #1091. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:33 S.scrofa:45

L0PBE1              	100.00%		P29269              	100.00%
                    	       		F1SM78              	91.46%
                    	       		I3LBF7              	86.18%
                    	       		F1RKG0              	32.52%
                    	       		F6PSL2              	32.11%
                    	       		Q5XLD2              	28.46%
                    	       		I3L9U0              	27.64%
                    	       		F1SSF9              	19.92%
Bootstrap support for L0PBE1 as seed ortholog is 93%.
Bootstrap support for P29269 as seed ortholog is 99%.

Group of orthologs #1092. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 S.scrofa:30

L0P6Z0              	100.00%		Q9GLV6              	100.00%
                    	       		F1S0P6              	10.11%
Bootstrap support for L0P6Z0 as seed ortholog is 100%.
Bootstrap support for Q9GLV6 as seed ortholog is 93%.

Group of orthologs #1093. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:38 S.scrofa:107

L0PEK0              	100.00%		Q95250              	100.00%
                    	       		A9LM01              	30.48%
Bootstrap support for L0PEK0 as seed ortholog is 93%.
Bootstrap support for Q95250 as seed ortholog is 100%.

Group of orthologs #1094. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 S.scrofa:107

L0PB99              	100.00%		F1SFR2              	100.00%
Bootstrap support for L0PB99 as seed ortholog is 100%.
Bootstrap support for F1SFR2 as seed ortholog is 100%.

Group of orthologs #1095. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 S.scrofa:107

L0PHA7              	100.00%		I3LIT6              	100.00%
Bootstrap support for L0PHA7 as seed ortholog is 100%.
Bootstrap support for I3LIT6 as seed ortholog is 100%.

Group of orthologs #1096. Best score 106 bits
Score difference with first non-orthologous sequence - P.jiroveci:106 S.scrofa:106

L0PBQ7              	100.00%		F1RJM9              	100.00%
                    	       		F1RGA3              	75.28%
                    	       		F1RFQ6              	55.68%
                    	       		F1RI88              	51.89%
                    	       		F1RIR2              	24.94%
                    	       		F1S731              	14.03%
                    	       		I3LSW1              	6.68%
Bootstrap support for L0PBQ7 as seed ortholog is 100%.
Bootstrap support for F1RJM9 as seed ortholog is 100%.

Group of orthologs #1097. Best score 106 bits
Score difference with first non-orthologous sequence - P.jiroveci:106 S.scrofa:106

L0P7D7              	100.00%		A6N8P5              	100.00%
Bootstrap support for L0P7D7 as seed ortholog is 100%.
Bootstrap support for A6N8P5 as seed ortholog is 100%.

Group of orthologs #1098. Best score 106 bits
Score difference with first non-orthologous sequence - P.jiroveci:106 S.scrofa:106

L0P9Z6              	100.00%		A1XQR9              	100.00%
Bootstrap support for L0P9Z6 as seed ortholog is 100%.
Bootstrap support for A1XQR9 as seed ortholog is 100%.

Group of orthologs #1099. Best score 106 bits
Score difference with first non-orthologous sequence - P.jiroveci:106 S.scrofa:106

L0PF95              	100.00%		I3LKG7              	100.00%
Bootstrap support for L0PF95 as seed ortholog is 100%.
Bootstrap support for I3LKG7 as seed ortholog is 100%.

Group of orthologs #1100. Best score 106 bits
Score difference with first non-orthologous sequence - P.jiroveci:106 S.scrofa:106

L0PFZ8              	100.00%		I3LL38              	100.00%
Bootstrap support for L0PFZ8 as seed ortholog is 100%.
Bootstrap support for I3LL38 as seed ortholog is 100%.

Group of orthologs #1101. Best score 105 bits
Score difference with first non-orthologous sequence - P.jiroveci:105 S.scrofa:105

L0P965              	100.00%		I3LU94              	100.00%
                    	       		Q6QAP7              	16.30%
Bootstrap support for L0P965 as seed ortholog is 100%.
Bootstrap support for I3LU94 as seed ortholog is 100%.

Group of orthologs #1102. Best score 105 bits
Score difference with first non-orthologous sequence - P.jiroveci:105 S.scrofa:105

L0PDJ4              	100.00%		F1RIJ5              	100.00%
Bootstrap support for L0PDJ4 as seed ortholog is 100%.
Bootstrap support for F1RIJ5 as seed ortholog is 100%.

Group of orthologs #1103. Best score 105 bits
Score difference with first non-orthologous sequence - P.jiroveci:105 S.scrofa:105

L0PBX3              	100.00%		F1S1D9              	100.00%
Bootstrap support for L0PBX3 as seed ortholog is 100%.
Bootstrap support for F1S1D9 as seed ortholog is 100%.

Group of orthologs #1104. Best score 105 bits
Score difference with first non-orthologous sequence - P.jiroveci:105 S.scrofa:105

L0PFM0              	100.00%		F1S7E0              	100.00%
Bootstrap support for L0PFM0 as seed ortholog is 100%.
Bootstrap support for F1S7E0 as seed ortholog is 100%.

Group of orthologs #1105. Best score 105 bits
Score difference with first non-orthologous sequence - P.jiroveci:105 S.scrofa:105

L0P7T7              	100.00%		F1ST67              	100.00%
Bootstrap support for L0P7T7 as seed ortholog is 100%.
Bootstrap support for F1ST67 as seed ortholog is 100%.

Group of orthologs #1106. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 S.scrofa:104

L0PD09              	100.00%		F1RFS1              	100.00%
                    	       		I3LN82              	66.89%
                    	       		F1RFS3              	35.22%
                    	       		I3L8Z6              	32.85%
                    	       		F1RV21              	20.11%
                    	       		F1SCX9              	17.87%
                    	       		F1SKP1              	17.35%
                    	       		F1SKD6              	16.16%
                    	       		I3LQ25              	15.51%
                    	       		F1S621              	15.24%
                    	       		F1SBQ5              	14.32%
                    	       		F1SBP8              	12.88%
                    	       		F1RVX0              	10.12%
Bootstrap support for L0PD09 as seed ortholog is 100%.
Bootstrap support for F1RFS1 as seed ortholog is 100%.

Group of orthologs #1107. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 S.scrofa:104

L0PC19              	100.00%		K7GSB3              	100.00%
                    	       		I3LNG6              	24.42%
Bootstrap support for L0PC19 as seed ortholog is 100%.
Bootstrap support for K7GSB3 as seed ortholog is 100%.

Group of orthologs #1108. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 S.scrofa:104

L0PHI8              	100.00%		A5GFR5              	100.00%
Bootstrap support for L0PHI8 as seed ortholog is 100%.
Bootstrap support for A5GFR5 as seed ortholog is 100%.

Group of orthologs #1109. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 S.scrofa:104

L0PBA3              	100.00%		F1RR38              	100.00%
Bootstrap support for L0PBA3 as seed ortholog is 100%.
Bootstrap support for F1RR38 as seed ortholog is 100%.

Group of orthologs #1110. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 S.scrofa:104

L0PCV9              	100.00%		F1S1G1              	100.00%
Bootstrap support for L0PCV9 as seed ortholog is 100%.
Bootstrap support for F1S1G1 as seed ortholog is 100%.

Group of orthologs #1111. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 S.scrofa:104

L0P8J6              	100.00%		F1S8Y4              	100.00%
Bootstrap support for L0P8J6 as seed ortholog is 100%.
Bootstrap support for F1S8Y4 as seed ortholog is 100%.

Group of orthologs #1112. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 S.scrofa:104

L0PAM7              	100.00%		F1SLE2              	100.00%
Bootstrap support for L0PAM7 as seed ortholog is 100%.
Bootstrap support for F1SLE2 as seed ortholog is 100%.

Group of orthologs #1113. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 S.scrofa:36

L0P9W7              	100.00%		P82460              	100.00%
Bootstrap support for L0P9W7 as seed ortholog is 100%.
Bootstrap support for P82460 as seed ortholog is 95%.

Group of orthologs #1114. Best score 103 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 S.scrofa:103

L0PA88              	100.00%		I3LCC2              	100.00%
Bootstrap support for L0PA88 as seed ortholog is 100%.
Bootstrap support for I3LCC2 as seed ortholog is 100%.

Group of orthologs #1115. Best score 103 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 S.scrofa:103

L0P8G4              	100.00%		Q6QAT1              	100.00%
Bootstrap support for L0P8G4 as seed ortholog is 100%.
Bootstrap support for Q6QAT1 as seed ortholog is 100%.

Group of orthologs #1116. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:102 S.scrofa:39

L0PDF0              	100.00%		F2Z501              	100.00%
                    	       		F1RLE5              	8.42%
Bootstrap support for L0PDF0 as seed ortholog is 100%.
Bootstrap support for F2Z501 as seed ortholog is 87%.

Group of orthologs #1117. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:102 S.scrofa:102

L0PD58              	100.00%		F1RS38              	100.00%
Bootstrap support for L0PD58 as seed ortholog is 100%.
Bootstrap support for F1RS38 as seed ortholog is 100%.

Group of orthologs #1118. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:102 S.scrofa:102

L0PEA3              	100.00%		F1RRN2              	100.00%
Bootstrap support for L0PEA3 as seed ortholog is 100%.
Bootstrap support for F1RRN2 as seed ortholog is 100%.

Group of orthologs #1119. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:102 S.scrofa:102

L0P9F1              	100.00%		F2Z5K6              	100.00%
Bootstrap support for L0P9F1 as seed ortholog is 100%.
Bootstrap support for F2Z5K6 as seed ortholog is 100%.

Group of orthologs #1120. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:102 S.scrofa:6

L0PD86              	100.00%		P00258              	100.00%
Bootstrap support for L0PD86 as seed ortholog is 100%.
Bootstrap support for P00258 as seed ortholog is 64%.
Alternative seed ortholog is F1S3K4 (6 bits away from this cluster)

Group of orthologs #1121. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 S.scrofa:101

L0P9H0              	100.00%		F1SIT7              	100.00%
                    	       		A1XQU7              	84.38%
                    	       		F1RJQ9              	82.81%
                    	       		F1RN65              	42.97%
                    	       		I3LFV6              	39.06%
                    	       		F1SBK3              	13.28%
Bootstrap support for L0P9H0 as seed ortholog is 100%.
Bootstrap support for F1SIT7 as seed ortholog is 100%.

Group of orthologs #1122. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 S.scrofa:101

L0P8Q8              	100.00%		F1RT70              	100.00%
                    	       		F1S880              	36.49%
                    	       		I3LJJ9              	10.20%
Bootstrap support for L0P8Q8 as seed ortholog is 100%.
Bootstrap support for F1RT70 as seed ortholog is 100%.

Group of orthologs #1123. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 S.scrofa:101

L0PFQ6              	100.00%		F1S001              	100.00%
Bootstrap support for L0PFQ6 as seed ortholog is 100%.
Bootstrap support for F1S001 as seed ortholog is 100%.

Group of orthologs #1124. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 S.scrofa:101

L0PE10              	100.00%		F1S2Q3              	100.00%
Bootstrap support for L0PE10 as seed ortholog is 100%.
Bootstrap support for F1S2Q3 as seed ortholog is 100%.

Group of orthologs #1125. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 S.scrofa:101

L0P8Q1              	100.00%		F1SSH0              	100.00%
Bootstrap support for L0P8Q1 as seed ortholog is 100%.
Bootstrap support for F1SSH0 as seed ortholog is 100%.

Group of orthologs #1126. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 S.scrofa:101

L0PEL9              	100.00%		F1SSY4              	100.00%
Bootstrap support for L0PEL9 as seed ortholog is 100%.
Bootstrap support for F1SSY4 as seed ortholog is 100%.

Group of orthologs #1127. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 S.scrofa:101

L0P9R5              	100.00%		P60899              	100.00%
Bootstrap support for L0P9R5 as seed ortholog is 100%.
Bootstrap support for P60899 as seed ortholog is 100%.

Group of orthologs #1128. Best score 100 bits
Score difference with first non-orthologous sequence - P.jiroveci:100 S.scrofa:100

L0PC01              	100.00%		F1RWX6              	100.00%
                    	       		F1SPQ8              	45.00%
                    	       		F1SPQ9              	12.84%
Bootstrap support for L0PC01 as seed ortholog is 100%.
Bootstrap support for F1RWX6 as seed ortholog is 100%.

Group of orthologs #1129. Best score 100 bits
Score difference with first non-orthologous sequence - P.jiroveci:100 S.scrofa:100

L0P997              	100.00%		F1SE87              	100.00%
Bootstrap support for L0P997 as seed ortholog is 100%.
Bootstrap support for F1SE87 as seed ortholog is 100%.

Group of orthologs #1130. Best score 100 bits
Score difference with first non-orthologous sequence - P.jiroveci:100 S.scrofa:100

L0PGF4              	100.00%		F1SDM6              	100.00%
Bootstrap support for L0PGF4 as seed ortholog is 100%.
Bootstrap support for F1SDM6 as seed ortholog is 100%.

Group of orthologs #1131. Best score 100 bits
Score difference with first non-orthologous sequence - P.jiroveci:100 S.scrofa:59

L0PD96              	100.00%		F2Z5F1              	100.00%
Bootstrap support for L0PD96 as seed ortholog is 100%.
Bootstrap support for F2Z5F1 as seed ortholog is 99%.

Group of orthologs #1132. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 S.scrofa:99

L0PB92              	100.00%		F1RV76              	100.00%
                    	       		F1STU7              	20.68%
Bootstrap support for L0PB92 as seed ortholog is 100%.
Bootstrap support for F1RV76 as seed ortholog is 100%.

Group of orthologs #1133. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 S.scrofa:99

L0PCQ4              	100.00%		F2Z5B9              	100.00%
                    	       		Q29223              	81.20%
Bootstrap support for L0PCQ4 as seed ortholog is 100%.
Bootstrap support for F2Z5B9 as seed ortholog is 100%.

Group of orthologs #1134. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:29 S.scrofa:12

L0PCM4              	100.00%		I3LBN9              	100.00%
                    	       		Q06AA6              	51.57%
Bootstrap support for L0PCM4 as seed ortholog is 98%.
Bootstrap support for I3LBN9 as seed ortholog is 78%.

Group of orthologs #1135. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 S.scrofa:99

L0P8M3              	100.00%		F1SI58              	100.00%
Bootstrap support for L0P8M3 as seed ortholog is 100%.
Bootstrap support for F1SI58 as seed ortholog is 100%.

Group of orthologs #1136. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 S.scrofa:40

L0PE14              	100.00%		I3LRD0              	100.00%
Bootstrap support for L0PE14 as seed ortholog is 100%.
Bootstrap support for I3LRD0 as seed ortholog is 99%.

Group of orthologs #1137. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 S.scrofa:99

L0PGP3              	100.00%		I3LRA4              	100.00%
Bootstrap support for L0PGP3 as seed ortholog is 100%.
Bootstrap support for I3LRA4 as seed ortholog is 100%.

Group of orthologs #1138. Best score 98 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 S.scrofa:98

L0PE32              	100.00%		F2Z4Y0              	100.00%
Bootstrap support for L0PE32 as seed ortholog is 100%.
Bootstrap support for F2Z4Y0 as seed ortholog is 100%.

Group of orthologs #1139. Best score 97 bits
Score difference with first non-orthologous sequence - P.jiroveci:97 S.scrofa:97

L0P7W8              	100.00%		F1RZ14              	100.00%
L0P8R2              	100.00%		
Bootstrap support for L0P7W8 as seed ortholog is 100%.
Bootstrap support for L0P8R2 as seed ortholog is 100%.
Bootstrap support for F1RZ14 as seed ortholog is 100%.

Group of orthologs #1140. Best score 97 bits
Score difference with first non-orthologous sequence - P.jiroveci:97 S.scrofa:97

L0PFT4              	100.00%		K7GR66              	100.00%
                    	       		F1S9E9              	61.27%
Bootstrap support for L0PFT4 as seed ortholog is 100%.
Bootstrap support for K7GR66 as seed ortholog is 100%.

Group of orthologs #1141. Best score 97 bits
Score difference with first non-orthologous sequence - P.jiroveci:97 S.scrofa:97

L0PAV4              	100.00%		F2Z5K1              	100.00%
Bootstrap support for L0PAV4 as seed ortholog is 100%.
Bootstrap support for F2Z5K1 as seed ortholog is 100%.

Group of orthologs #1142. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 S.scrofa:5

L0PB42              	100.00%		I3LLG3              	100.00%
                    	       		P61958              	72.41%
                    	       		A7WLI0              	61.21%
Bootstrap support for L0PB42 as seed ortholog is 100%.
Bootstrap support for I3LLG3 as seed ortholog is 63%.
Alternative seed ortholog is A7WLH8 (5 bits away from this cluster)

Group of orthologs #1143. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 S.scrofa:96

L0PG13              	100.00%		F2Z5Q8              	100.00%
                    	       		I3LIK0              	63.64%
Bootstrap support for L0PG13 as seed ortholog is 100%.
Bootstrap support for F2Z5Q8 as seed ortholog is 100%.

Group of orthologs #1144. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 S.scrofa:96

L0P868              	100.00%		F1SE31              	100.00%
Bootstrap support for L0P868 as seed ortholog is 100%.
Bootstrap support for F1SE31 as seed ortholog is 100%.

Group of orthologs #1145. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 S.scrofa:96

L0PCF7              	100.00%		F1SFE4              	100.00%
Bootstrap support for L0PCF7 as seed ortholog is 100%.
Bootstrap support for F1SFE4 as seed ortholog is 100%.

Group of orthologs #1146. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 S.scrofa:42

L0PFA1              	100.00%		F1SQR4              	100.00%
Bootstrap support for L0PFA1 as seed ortholog is 100%.
Bootstrap support for F1SQR4 as seed ortholog is 99%.

Group of orthologs #1147. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 S.scrofa:96

L0PEX4              	100.00%		I3LF36              	100.00%
Bootstrap support for L0PEX4 as seed ortholog is 100%.
Bootstrap support for I3LF36 as seed ortholog is 100%.

Group of orthologs #1148. Best score 95 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 S.scrofa:95

L0P7G0              	100.00%		I3L7A1              	100.00%
L0PGR6              	7.18%		
Bootstrap support for L0P7G0 as seed ortholog is 100%.
Bootstrap support for I3L7A1 as seed ortholog is 100%.

Group of orthologs #1149. Best score 95 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 S.scrofa:95

L0PI42              	100.00%		F1S3C3              	100.00%
Bootstrap support for L0PI42 as seed ortholog is 100%.
Bootstrap support for F1S3C3 as seed ortholog is 100%.

Group of orthologs #1150. Best score 95 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 S.scrofa:95

L0PEZ6              	100.00%		I3LTI3              	100.00%
Bootstrap support for L0PEZ6 as seed ortholog is 100%.
Bootstrap support for I3LTI3 as seed ortholog is 100%.

Group of orthologs #1151. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 S.scrofa:94

L0PB30              	100.00%		F1SA85              	100.00%
                    	       		I3LA00              	21.61%
                    	       		F1RJG0              	6.64%
                    	       		F1SFT6              	5.26%
Bootstrap support for L0PB30 as seed ortholog is 100%.
Bootstrap support for F1SA85 as seed ortholog is 100%.

Group of orthologs #1152. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 S.scrofa:94

L0PF90              	100.00%		F1RPX1              	100.00%
Bootstrap support for L0PF90 as seed ortholog is 100%.
Bootstrap support for F1RPX1 as seed ortholog is 100%.

Group of orthologs #1153. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 S.scrofa:94

L0P9D5              	100.00%		F1RZ19              	100.00%
Bootstrap support for L0P9D5 as seed ortholog is 100%.
Bootstrap support for F1RZ19 as seed ortholog is 100%.

Group of orthologs #1154. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 S.scrofa:94

L0PBZ3              	100.00%		F1S3F3              	100.00%
Bootstrap support for L0PBZ3 as seed ortholog is 100%.
Bootstrap support for F1S3F3 as seed ortholog is 100%.

Group of orthologs #1155. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 S.scrofa:94

L0PBK9              	100.00%		F1S6Q7              	100.00%
Bootstrap support for L0PBK9 as seed ortholog is 100%.
Bootstrap support for F1S6Q7 as seed ortholog is 100%.

Group of orthologs #1156. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 S.scrofa:94

L0PF82              	100.00%		F1S5Y9              	100.00%
Bootstrap support for L0PF82 as seed ortholog is 100%.
Bootstrap support for F1S5Y9 as seed ortholog is 100%.

Group of orthologs #1157. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 S.scrofa:94

L0PCQ5              	100.00%		F2Z5V2              	100.00%
Bootstrap support for L0PCQ5 as seed ortholog is 100%.
Bootstrap support for F2Z5V2 as seed ortholog is 100%.

Group of orthologs #1158. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 S.scrofa:94

L0PDQ8              	100.00%		F2Z545              	100.00%
Bootstrap support for L0PDQ8 as seed ortholog is 100%.
Bootstrap support for F2Z545 as seed ortholog is 100%.

Group of orthologs #1159. Best score 93 bits
Score difference with first non-orthologous sequence - P.jiroveci:93 S.scrofa:93

L0P8Y9              	100.00%		A5GFS8              	100.00%
                    	       		I3L5C0              	17.27%
Bootstrap support for L0P8Y9 as seed ortholog is 100%.
Bootstrap support for A5GFS8 as seed ortholog is 100%.

Group of orthologs #1160. Best score 93 bits
Score difference with first non-orthologous sequence - P.jiroveci:93 S.scrofa:93

L0PEX2              	100.00%		E2IUK4              	100.00%
                    	       		F1RFE9              	29.56%
Bootstrap support for L0PEX2 as seed ortholog is 100%.
Bootstrap support for E2IUK4 as seed ortholog is 100%.

Group of orthologs #1161. Best score 93 bits
Score difference with first non-orthologous sequence - P.jiroveci:93 S.scrofa:93

L0PEZ8              	100.00%		I3LNQ2              	100.00%
Bootstrap support for L0PEZ8 as seed ortholog is 100%.
Bootstrap support for I3LNQ2 as seed ortholog is 100%.

Group of orthologs #1162. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 S.scrofa:92

L0PBD3              	100.00%		F1RPJ6              	100.00%
                    	       		F1SET7              	44.93%
                    	       		I3LAG4              	30.92%
Bootstrap support for L0PBD3 as seed ortholog is 100%.
Bootstrap support for F1RPJ6 as seed ortholog is 100%.

Group of orthologs #1163. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 S.scrofa:92

L0P9X3              	100.00%		F1S1C7              	100.00%
                    	       		I3LL40              	100.00%
Bootstrap support for L0P9X3 as seed ortholog is 100%.
Bootstrap support for F1S1C7 as seed ortholog is 100%.
Bootstrap support for I3LL40 as seed ortholog is 100%.

Group of orthologs #1164. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 S.scrofa:92

L0PFK1              	100.00%		F1SGA9              	100.00%
                    	       		F1RJX3              	17.99%
Bootstrap support for L0PFK1 as seed ortholog is 100%.
Bootstrap support for F1SGA9 as seed ortholog is 100%.

Group of orthologs #1165. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 S.scrofa:13

L0PFT5              	100.00%		I3LBP7              	100.00%
                    	       		F1SV67              	72.26%
Bootstrap support for L0PFT5 as seed ortholog is 100%.
Bootstrap support for I3LBP7 as seed ortholog is 94%.

Group of orthologs #1166. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 S.scrofa:92

L0PFM9              	100.00%		P12026              	100.00%
                    	       		F1RHJ8              	7.95%
Bootstrap support for L0PFM9 as seed ortholog is 100%.
Bootstrap support for P12026 as seed ortholog is 100%.

Group of orthologs #1167. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 S.scrofa:92

L0PF35              	100.00%		Q19QT9              	100.00%
                    	       		F1S9Q7              	80.05%
Bootstrap support for L0PF35 as seed ortholog is 100%.
Bootstrap support for Q19QT9 as seed ortholog is 100%.

Group of orthologs #1168. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 S.scrofa:92

L0PAW5              	100.00%		F1S3J8              	100.00%
Bootstrap support for L0PAW5 as seed ortholog is 100%.
Bootstrap support for F1S3J8 as seed ortholog is 100%.

Group of orthologs #1169. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 S.scrofa:92

L0PHZ2              	100.00%		I3LLD6              	100.00%
Bootstrap support for L0PHZ2 as seed ortholog is 100%.
Bootstrap support for I3LLD6 as seed ortholog is 100%.

Group of orthologs #1170. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 S.scrofa:91

L0PA80              	100.00%		F1SDA4              	100.00%
                    	       		I3L783              	60.17%
Bootstrap support for L0PA80 as seed ortholog is 100%.
Bootstrap support for F1SDA4 as seed ortholog is 100%.

Group of orthologs #1171. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 S.scrofa:91

L0P995              	100.00%		F1RS79              	100.00%
Bootstrap support for L0P995 as seed ortholog is 100%.
Bootstrap support for F1RS79 as seed ortholog is 100%.

Group of orthologs #1172. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 S.scrofa:91

L0P8Z4              	100.00%		F1SUP0              	100.00%
Bootstrap support for L0P8Z4 as seed ortholog is 100%.
Bootstrap support for F1SUP0 as seed ortholog is 100%.

Group of orthologs #1173. Best score 90 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 S.scrofa:90

L0PDY4              	100.00%		F1S3D5              	100.00%
                    	       		I3LJD2              	41.31%
                    	       		F1STC9              	34.47%
Bootstrap support for L0PDY4 as seed ortholog is 100%.
Bootstrap support for F1S3D5 as seed ortholog is 100%.

Group of orthologs #1174. Best score 90 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 S.scrofa:90

L0PDD4              	100.00%		F1RN17              	100.00%
                    	       		I3L6M9              	47.41%
Bootstrap support for L0PDD4 as seed ortholog is 100%.
Bootstrap support for F1RN17 as seed ortholog is 100%.

Group of orthologs #1175. Best score 90 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 S.scrofa:40

L0PD56              	100.00%		I3LFG5              	100.00%
                    	       		I3LGA2              	29.92%
Bootstrap support for L0PD56 as seed ortholog is 100%.
Bootstrap support for I3LFG5 as seed ortholog is 87%.

Group of orthologs #1176. Best score 90 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 S.scrofa:90

L0PG18              	100.00%		I3LT67              	100.00%
                    	       		F2Z5H3              	62.02%
Bootstrap support for L0PG18 as seed ortholog is 100%.
Bootstrap support for I3LT67 as seed ortholog is 100%.

Group of orthologs #1177. Best score 90 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 S.scrofa:90

L0PHH5              	100.00%		P00172              	100.00%
                    	       		F1S393              	26.20%
Bootstrap support for L0PHH5 as seed ortholog is 100%.
Bootstrap support for P00172 as seed ortholog is 100%.

Group of orthologs #1178. Best score 90 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 S.scrofa:90

L0PFT3              	100.00%		F1REW9              	100.00%
Bootstrap support for L0PFT3 as seed ortholog is 100%.
Bootstrap support for F1REW9 as seed ortholog is 100%.

Group of orthologs #1179. Best score 90 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 S.scrofa:90

L0P9A5              	100.00%		F1S192              	100.00%
Bootstrap support for L0P9A5 as seed ortholog is 100%.
Bootstrap support for F1S192 as seed ortholog is 100%.

Group of orthologs #1180. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 S.scrofa:30

L0PC69              	100.00%		F1RS16              	100.00%
                    	       		I3LH08              	75.78%
Bootstrap support for L0PC69 as seed ortholog is 100%.
Bootstrap support for F1RS16 as seed ortholog is 86%.

Group of orthologs #1181. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 S.scrofa:18

L0PAT3              	100.00%		F1S7S9              	100.00%
Bootstrap support for L0PAT3 as seed ortholog is 100%.
Bootstrap support for F1S7S9 as seed ortholog is 93%.

Group of orthologs #1182. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 S.scrofa:89

L0PEP8              	100.00%		I3LT52              	100.00%
Bootstrap support for L0PEP8 as seed ortholog is 100%.
Bootstrap support for I3LT52 as seed ortholog is 100%.

Group of orthologs #1183. Best score 88 bits
Score difference with first non-orthologous sequence - P.jiroveci:88 S.scrofa:88

L0PHU9              	100.00%		F1SLR1              	100.00%
Bootstrap support for L0PHU9 as seed ortholog is 100%.
Bootstrap support for F1SLR1 as seed ortholog is 100%.

Group of orthologs #1184. Best score 88 bits
Score difference with first non-orthologous sequence - P.jiroveci:88 S.scrofa:88

L0PDE3              	100.00%		I3LRD5              	100.00%
Bootstrap support for L0PDE3 as seed ortholog is 100%.
Bootstrap support for I3LRD5 as seed ortholog is 100%.

Group of orthologs #1185. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 S.scrofa:41

L0PAD6              	100.00%		Q27HK4              	100.00%
                    	       		F1RF29              	35.55%
                    	       		I3LRA8              	34.11%
Bootstrap support for L0PAD6 as seed ortholog is 100%.
Bootstrap support for Q27HK4 as seed ortholog is 88%.

Group of orthologs #1186. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 S.scrofa:87

L0PAK5              	100.00%		I3L6I0              	100.00%
                    	       		F1SEH7              	37.29%
Bootstrap support for L0PAK5 as seed ortholog is 100%.
Bootstrap support for I3L6I0 as seed ortholog is 100%.

Group of orthologs #1187. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 S.scrofa:87

L0PA96              	100.00%		F1S3T8              	100.00%
Bootstrap support for L0PA96 as seed ortholog is 100%.
Bootstrap support for F1S3T8 as seed ortholog is 100%.

Group of orthologs #1188. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:18 S.scrofa:87

L0PD30              	100.00%		F1SMR7              	100.00%
Bootstrap support for L0PD30 as seed ortholog is 72%.
Alternative seed ortholog is L0P9D2 (18 bits away from this cluster)
Bootstrap support for F1SMR7 as seed ortholog is 100%.

Group of orthologs #1189. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 S.scrofa:87

L0PEF7              	100.00%		F2Z5G8              	100.00%
Bootstrap support for L0PEF7 as seed ortholog is 100%.
Bootstrap support for F2Z5G8 as seed ortholog is 100%.

Group of orthologs #1190. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:44 S.scrofa:87

L0P9G4              	100.00%		I3LUD5              	100.00%
Bootstrap support for L0P9G4 as seed ortholog is 95%.
Bootstrap support for I3LUD5 as seed ortholog is 100%.

Group of orthologs #1191. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 S.scrofa:86

L0P8W8              	100.00%		I3L613              	100.00%
L0P9K5              	56.02%		F2Z541              	60.73%
                    	       		I3LCN9              	45.66%
                    	       		I3LQZ6              	41.55%
Bootstrap support for L0P8W8 as seed ortholog is 100%.
Bootstrap support for I3L613 as seed ortholog is 100%.

Group of orthologs #1192. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 S.scrofa:86

L0P887              	100.00%		C5H0C6              	100.00%
                    	       		F1SCG8              	29.41%
Bootstrap support for L0P887 as seed ortholog is 100%.
Bootstrap support for C5H0C6 as seed ortholog is 100%.

Group of orthologs #1193. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 S.scrofa:86

L0PBC9              	100.00%		F1S5M7              	100.00%
Bootstrap support for L0PBC9 as seed ortholog is 100%.
Bootstrap support for F1S5M7 as seed ortholog is 100%.

Group of orthologs #1194. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 S.scrofa:86

L0PDG4              	100.00%		F1S3E3              	100.00%
Bootstrap support for L0PDG4 as seed ortholog is 100%.
Bootstrap support for F1S3E3 as seed ortholog is 100%.

Group of orthologs #1195. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 S.scrofa:86

L0PEI6              	100.00%		F1S216              	100.00%
Bootstrap support for L0PEI6 as seed ortholog is 100%.
Bootstrap support for F1S216 as seed ortholog is 100%.

Group of orthologs #1196. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:19 S.scrofa:86

L0PAT8              	100.00%		F1SGP6              	100.00%
Bootstrap support for L0PAT8 as seed ortholog is 74%.
Alternative seed ortholog is L0PEV0 (19 bits away from this cluster)
Bootstrap support for F1SGP6 as seed ortholog is 100%.

Group of orthologs #1197. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 S.scrofa:86

L0P9A1              	100.00%		I3LGB3              	100.00%
Bootstrap support for L0P9A1 as seed ortholog is 100%.
Bootstrap support for I3LGB3 as seed ortholog is 100%.

Group of orthologs #1198. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 S.scrofa:86

L0PFY6              	100.00%		I3LN95              	100.00%
Bootstrap support for L0PFY6 as seed ortholog is 100%.
Bootstrap support for I3LN95 as seed ortholog is 100%.

Group of orthologs #1199. Best score 85 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 S.scrofa:85

L0P9T8              	100.00%		F1RP57              	100.00%
                    	       		F1RP58              	68.02%
                    	       		F1RP56              	66.19%
                    	       		I3LSY6              	39.00%
                    	       		I3LQK0              	8.86%
Bootstrap support for L0P9T8 as seed ortholog is 100%.
Bootstrap support for F1RP57 as seed ortholog is 100%.

Group of orthologs #1200. Best score 85 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 S.scrofa:85

L0PHS7              	100.00%		F1RPK6              	100.00%
                    	       		I3LHE1              	18.32%
Bootstrap support for L0PHS7 as seed ortholog is 100%.
Bootstrap support for F1RPK6 as seed ortholog is 100%.

Group of orthologs #1201. Best score 85 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 S.scrofa:85

L0PFF3              	100.00%		F1S6M0              	100.00%
Bootstrap support for L0PFF3 as seed ortholog is 100%.
Bootstrap support for F1S6M0 as seed ortholog is 100%.

Group of orthologs #1202. Best score 85 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 S.scrofa:85

L0PFF8              	100.00%		I3LA25              	100.00%
Bootstrap support for L0PFF8 as seed ortholog is 100%.
Bootstrap support for I3LA25 as seed ortholog is 100%.

Group of orthologs #1203. Best score 85 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 S.scrofa:85

L0P7T1              	100.00%		P00377              	100.00%
Bootstrap support for L0P7T1 as seed ortholog is 100%.
Bootstrap support for P00377 as seed ortholog is 100%.

Group of orthologs #1204. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 S.scrofa:84

L0PE51              	100.00%		A5D9K6              	100.00%
                    	       		F1S033              	51.48%
                    	       		I3L6E5              	42.53%
Bootstrap support for L0PE51 as seed ortholog is 100%.
Bootstrap support for A5D9K6 as seed ortholog is 100%.

Group of orthologs #1205. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 S.scrofa:84

L0PCN8              	100.00%		F1SS96              	100.00%
                    	       		F1SR96              	49.86%
                    	       		D0G774              	42.55%
Bootstrap support for L0PCN8 as seed ortholog is 100%.
Bootstrap support for F1SS96 as seed ortholog is 100%.

Group of orthologs #1206. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 S.scrofa:84

L0PF93              	100.00%		F1RKF6              	100.00%
Bootstrap support for L0PF93 as seed ortholog is 100%.
Bootstrap support for F1RKF6 as seed ortholog is 100%.

Group of orthologs #1207. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 S.scrofa:84

L0PF50              	100.00%		F1SJ34              	100.00%
Bootstrap support for L0PF50 as seed ortholog is 100%.
Bootstrap support for F1SJ34 as seed ortholog is 100%.

Group of orthologs #1208. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 S.scrofa:84

L0PAF7              	100.00%		I3LHF8              	100.00%
Bootstrap support for L0PAF7 as seed ortholog is 100%.
Bootstrap support for I3LHF8 as seed ortholog is 100%.

Group of orthologs #1209. Best score 83 bits
Score difference with first non-orthologous sequence - P.jiroveci:83 S.scrofa:8

L0PEL1              	100.00%		Q8WNW3              	100.00%
                    	       		Q8WNW4              	62.82%
                    	       		F1RX81              	62.17%
Bootstrap support for L0PEL1 as seed ortholog is 100%.
Bootstrap support for Q8WNW3 as seed ortholog is 55%.
Alternative seed ortholog is C6K7I2 (8 bits away from this cluster)

Group of orthologs #1210. Best score 83 bits
Score difference with first non-orthologous sequence - P.jiroveci:83 S.scrofa:83

L0PBX4              	100.00%		F1RQS4              	100.00%
                    	       		I3LQX4              	100.00%
Bootstrap support for L0PBX4 as seed ortholog is 100%.
Bootstrap support for F1RQS4 as seed ortholog is 100%.
Bootstrap support for I3LQX4 as seed ortholog is 100%.

Group of orthologs #1211. Best score 83 bits
Score difference with first non-orthologous sequence - P.jiroveci:83 S.scrofa:83

L0PGK9              	100.00%		I3LID0              	100.00%
                    	       		F1RXH0              	82.21%
Bootstrap support for L0PGK9 as seed ortholog is 100%.
Bootstrap support for I3LID0 as seed ortholog is 100%.

Group of orthologs #1212. Best score 83 bits
Score difference with first non-orthologous sequence - P.jiroveci:83 S.scrofa:83

L0PED2              	100.00%		F1RUF2              	100.00%
Bootstrap support for L0PED2 as seed ortholog is 100%.
Bootstrap support for F1RUF2 as seed ortholog is 100%.

Group of orthologs #1213. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 S.scrofa:82

L0PCX6              	100.00%		A1XQU3              	100.00%
                    	       		I3LIZ8              	96.74%
                    	       		I3LFN7              	79.53%
Bootstrap support for L0PCX6 as seed ortholog is 100%.
Bootstrap support for A1XQU3 as seed ortholog is 100%.

Group of orthologs #1214. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 S.scrofa:82

L0PE40              	100.00%		F1RG67              	100.00%
Bootstrap support for L0PE40 as seed ortholog is 100%.
Bootstrap support for F1RG67 as seed ortholog is 100%.

Group of orthologs #1215. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 S.scrofa:82

L0PG56              	100.00%		F1S484              	100.00%
Bootstrap support for L0PG56 as seed ortholog is 100%.
Bootstrap support for F1S484 as seed ortholog is 100%.

Group of orthologs #1216. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 S.scrofa:82

L0PCB5              	100.00%		I3LFM6              	100.00%
Bootstrap support for L0PCB5 as seed ortholog is 100%.
Bootstrap support for I3LFM6 as seed ortholog is 100%.

Group of orthologs #1217. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 S.scrofa:37

L0PEH7              	100.00%		I3LJ08              	100.00%
Bootstrap support for L0PEH7 as seed ortholog is 100%.
Bootstrap support for I3LJ08 as seed ortholog is 80%.

Group of orthologs #1218. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 S.scrofa:81

L0PDC5              	100.00%		F1RWU9              	100.00%
                    	       		K7GR91              	37.28%
Bootstrap support for L0PDC5 as seed ortholog is 100%.
Bootstrap support for F1RWU9 as seed ortholog is 100%.

Group of orthologs #1219. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 S.scrofa:81

L0P8B5              	100.00%		D0VWV4              	100.00%
Bootstrap support for L0P8B5 as seed ortholog is 100%.
Bootstrap support for D0VWV4 as seed ortholog is 100%.

Group of orthologs #1220. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 S.scrofa:81

L0PFU9              	100.00%		A5GFX0              	100.00%
Bootstrap support for L0PFU9 as seed ortholog is 100%.
Bootstrap support for A5GFX0 as seed ortholog is 100%.

Group of orthologs #1221. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 S.scrofa:81

L0PDE2              	100.00%		F1RX08              	100.00%
Bootstrap support for L0PDE2 as seed ortholog is 100%.
Bootstrap support for F1RX08 as seed ortholog is 100%.

Group of orthologs #1222. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 S.scrofa:81

L0PEV7              	100.00%		F1RY52              	100.00%
Bootstrap support for L0PEV7 as seed ortholog is 100%.
Bootstrap support for F1RY52 as seed ortholog is 100%.

Group of orthologs #1223. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 S.scrofa:4

L0PE88              	100.00%		F1SRU2              	100.00%
Bootstrap support for L0PE88 as seed ortholog is 100%.
Bootstrap support for F1SRU2 as seed ortholog is 56%.
Alternative seed ortholog is F1SUU4 (4 bits away from this cluster)

Group of orthologs #1224. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 S.scrofa:81

L0PEH3              	100.00%		F1SRT0              	100.00%
Bootstrap support for L0PEH3 as seed ortholog is 100%.
Bootstrap support for F1SRT0 as seed ortholog is 100%.

Group of orthologs #1225. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 S.scrofa:81

L0PFF2              	100.00%		I3LNF5              	100.00%
Bootstrap support for L0PFF2 as seed ortholog is 100%.
Bootstrap support for I3LNF5 as seed ortholog is 100%.

Group of orthologs #1226. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 S.scrofa:81

L0PD90              	100.00%		Q8HXL4              	100.00%
Bootstrap support for L0PD90 as seed ortholog is 100%.
Bootstrap support for Q8HXL4 as seed ortholog is 100%.

Group of orthologs #1227. Best score 80 bits
Score difference with first non-orthologous sequence - P.jiroveci:80 S.scrofa:80

L0PDB5              	100.00%		F1RWU7              	100.00%
                    	       		F1SAT5              	67.89%
Bootstrap support for L0PDB5 as seed ortholog is 100%.
Bootstrap support for F1RWU7 as seed ortholog is 100%.

Group of orthologs #1228. Best score 80 bits
Score difference with first non-orthologous sequence - P.jiroveci:80 S.scrofa:80

L0P9T3              	100.00%		F1S2K3              	100.00%
                    	       		I3L700              	80.95%
Bootstrap support for L0P9T3 as seed ortholog is 100%.
Bootstrap support for F1S2K3 as seed ortholog is 100%.

Group of orthologs #1229. Best score 80 bits
Score difference with first non-orthologous sequence - P.jiroveci:80 S.scrofa:32

L0PDW2              	100.00%		F1SHZ4              	100.00%
Bootstrap support for L0PDW2 as seed ortholog is 100%.
Bootstrap support for F1SHZ4 as seed ortholog is 78%.

Group of orthologs #1230. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 S.scrofa:79

L0PG42              	100.00%		F1RX79              	100.00%
                    	       		F1RS60              	44.19%
                    	       		F1SCR8              	31.46%
                    	       		I3LES0              	25.84%
                    	       		P53027              	19.10%
Bootstrap support for L0PG42 as seed ortholog is 100%.
Bootstrap support for F1RX79 as seed ortholog is 100%.

Group of orthologs #1231. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 S.scrofa:79

L0PAP8              	100.00%		F1RRR1              	100.00%
Bootstrap support for L0PAP8 as seed ortholog is 100%.
Bootstrap support for F1RRR1 as seed ortholog is 100%.

Group of orthologs #1232. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 S.scrofa:79

L0PGX1              	100.00%		F1RKQ9              	100.00%
Bootstrap support for L0PGX1 as seed ortholog is 100%.
Bootstrap support for F1RKQ9 as seed ortholog is 100%.

Group of orthologs #1233. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 S.scrofa:20

L0PFB0              	100.00%		F1RNU7              	100.00%
Bootstrap support for L0PFB0 as seed ortholog is 100%.
Bootstrap support for F1RNU7 as seed ortholog is 72%.
Alternative seed ortholog is I3L6K4 (20 bits away from this cluster)

Group of orthologs #1234. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 S.scrofa:79

L0PDS8              	100.00%		F1S286              	100.00%
Bootstrap support for L0PDS8 as seed ortholog is 100%.
Bootstrap support for F1S286 as seed ortholog is 100%.

Group of orthologs #1235. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 S.scrofa:79

L0PGW3              	100.00%		F1SKY0              	100.00%
Bootstrap support for L0PGW3 as seed ortholog is 100%.
Bootstrap support for F1SKY0 as seed ortholog is 100%.

Group of orthologs #1236. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 S.scrofa:79

L0P8R9              	100.00%		I3LCB2              	100.00%
Bootstrap support for L0P8R9 as seed ortholog is 100%.
Bootstrap support for I3LCB2 as seed ortholog is 100%.

Group of orthologs #1237. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 S.scrofa:79

L0P988              	100.00%		I3LJS5              	100.00%
Bootstrap support for L0P988 as seed ortholog is 100%.
Bootstrap support for I3LJS5 as seed ortholog is 100%.

Group of orthologs #1238. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 S.scrofa:79

L0PDD8              	100.00%		I3LS63              	100.00%
Bootstrap support for L0PDD8 as seed ortholog is 100%.
Bootstrap support for I3LS63 as seed ortholog is 100%.

Group of orthologs #1239. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 S.scrofa:78

L0PB53              	100.00%		F1RVD4              	100.00%
                    	       		F1RWL8              	40.58%
Bootstrap support for L0PB53 as seed ortholog is 100%.
Bootstrap support for F1RVD4 as seed ortholog is 100%.

Group of orthologs #1240. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 S.scrofa:78

L0P745              	100.00%		F1S213              	100.00%
Bootstrap support for L0P745 as seed ortholog is 100%.
Bootstrap support for F1S213 as seed ortholog is 100%.

Group of orthologs #1241. Best score 77 bits
Score difference with first non-orthologous sequence - P.jiroveci:77 S.scrofa:77

L0P724              	100.00%		F1RMQ4              	100.00%
Bootstrap support for L0P724 as seed ortholog is 100%.
Bootstrap support for F1RMQ4 as seed ortholog is 100%.

Group of orthologs #1242. Best score 77 bits
Score difference with first non-orthologous sequence - P.jiroveci:77 S.scrofa:77

L0P7V1              	100.00%		F1SCH5              	100.00%
Bootstrap support for L0P7V1 as seed ortholog is 100%.
Bootstrap support for F1SCH5 as seed ortholog is 100%.

Group of orthologs #1243. Best score 77 bits
Score difference with first non-orthologous sequence - P.jiroveci:18 S.scrofa:77

L0PIV0              	100.00%		F1SN88              	100.00%
Bootstrap support for L0PIV0 as seed ortholog is 78%.
Bootstrap support for F1SN88 as seed ortholog is 100%.

Group of orthologs #1244. Best score 76 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 S.scrofa:76

L0PI79              	100.00%		I3LFP0              	100.00%
                    	       		I3L7V2              	89.28%
                    	       		I3L8G0              	27.81%
Bootstrap support for L0PI79 as seed ortholog is 100%.
Bootstrap support for I3LFP0 as seed ortholog is 100%.

Group of orthologs #1245. Best score 76 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 S.scrofa:76

L0PB39              	100.00%		F1RQP1              	100.00%
Bootstrap support for L0PB39 as seed ortholog is 100%.
Bootstrap support for F1RQP1 as seed ortholog is 100%.

Group of orthologs #1246. Best score 76 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 S.scrofa:76

L0PE73              	100.00%		F1RNP8              	100.00%
Bootstrap support for L0PE73 as seed ortholog is 100%.
Bootstrap support for F1RNP8 as seed ortholog is 100%.

Group of orthologs #1247. Best score 76 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 S.scrofa:76

L0PD91              	100.00%		F1SMZ6              	100.00%
Bootstrap support for L0PD91 as seed ortholog is 100%.
Bootstrap support for F1SMZ6 as seed ortholog is 100%.

Group of orthologs #1248. Best score 76 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 S.scrofa:76

L0PHF2              	100.00%		I3L725              	100.00%
Bootstrap support for L0PHF2 as seed ortholog is 100%.
Bootstrap support for I3L725 as seed ortholog is 100%.

Group of orthologs #1249. Best score 76 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 S.scrofa:76

L0P9K1              	100.00%		I3LM25              	100.00%
Bootstrap support for L0P9K1 as seed ortholog is 100%.
Bootstrap support for I3LM25 as seed ortholog is 100%.

Group of orthologs #1250. Best score 76 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 S.scrofa:76

L0PB84              	100.00%		I3LQ51              	100.00%
Bootstrap support for L0PB84 as seed ortholog is 100%.
Bootstrap support for I3LQ51 as seed ortholog is 100%.

Group of orthologs #1251. Best score 76 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 S.scrofa:76

L0PGF9              	100.00%		I3LJU1              	100.00%
Bootstrap support for L0PGF9 as seed ortholog is 100%.
Bootstrap support for I3LJU1 as seed ortholog is 100%.

Group of orthologs #1252. Best score 75 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 S.scrofa:28

L0PAI2              	100.00%		F1SUI9              	100.00%
                    	       		I3LA49              	28.57%
                    	       		I3LVA1              	28.30%
                    	       		I3LNE2              	7.14%
Bootstrap support for L0PAI2 as seed ortholog is 100%.
Bootstrap support for F1SUI9 as seed ortholog is 92%.

Group of orthologs #1253. Best score 75 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 S.scrofa:75

L0P847              	100.00%		I3LGR4              	100.00%
                    	       		K7GPV1              	78.22%
                    	       		I3LQG4              	30.90%
                    	       		I3L866              	23.77%
Bootstrap support for L0P847 as seed ortholog is 100%.
Bootstrap support for I3LGR4 as seed ortholog is 100%.

Group of orthologs #1254. Best score 75 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 S.scrofa:1

L0PF67              	100.00%		F1SJR5              	100.00%
                    	       		I3LJ82              	60.31%
                    	       		F1SIC0              	44.49%
Bootstrap support for L0PF67 as seed ortholog is 100%.
Bootstrap support for F1SJR5 as seed ortholog is 76%.

Group of orthologs #1255. Best score 75 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 S.scrofa:75

L0P9X8              	100.00%		B2LYG4              	100.00%
                    	       		B2MVP8              	13.26%
Bootstrap support for L0P9X8 as seed ortholog is 100%.
Bootstrap support for B2LYG4 as seed ortholog is 100%.

Group of orthologs #1256. Best score 75 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 S.scrofa:75

L0PE66              	100.00%		A5GHK3              	100.00%
Bootstrap support for L0PE66 as seed ortholog is 100%.
Bootstrap support for A5GHK3 as seed ortholog is 100%.

Group of orthologs #1257. Best score 75 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 S.scrofa:75

L0PAS9              	100.00%		F1SAB6              	100.00%
Bootstrap support for L0PAS9 as seed ortholog is 100%.
Bootstrap support for F1SAB6 as seed ortholog is 100%.

Group of orthologs #1258. Best score 75 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 S.scrofa:75

L0PFV2              	100.00%		F1SI53              	100.00%
Bootstrap support for L0PFV2 as seed ortholog is 100%.
Bootstrap support for F1SI53 as seed ortholog is 100%.

Group of orthologs #1259. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 S.scrofa:74

L0PA37              	100.00%		F1RS55              	100.00%
                    	       		P12309              	100.00%
                    	       		F1RMF5              	75.89%
Bootstrap support for L0PA37 as seed ortholog is 100%.
Bootstrap support for F1RS55 as seed ortholog is 100%.
Bootstrap support for P12309 as seed ortholog is 100%.

Group of orthologs #1260. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 S.scrofa:74

L0PA21              	100.00%		F1RT79              	100.00%
Bootstrap support for L0PA21 as seed ortholog is 100%.
Bootstrap support for F1RT79 as seed ortholog is 100%.

Group of orthologs #1261. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 S.scrofa:74

L0PG11              	100.00%		F1RMH6              	100.00%
Bootstrap support for L0PG11 as seed ortholog is 100%.
Bootstrap support for F1RMH6 as seed ortholog is 100%.

Group of orthologs #1262. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 S.scrofa:74

L0PFK4              	100.00%		F1RNY3              	100.00%
Bootstrap support for L0PFK4 as seed ortholog is 100%.
Bootstrap support for F1RNY3 as seed ortholog is 100%.

Group of orthologs #1263. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 S.scrofa:74

L0PBR0              	100.00%		F1SAR9              	100.00%
Bootstrap support for L0PBR0 as seed ortholog is 100%.
Bootstrap support for F1SAR9 as seed ortholog is 100%.

Group of orthologs #1264. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 S.scrofa:74

L0PHV6              	100.00%		F1S4I0              	100.00%
Bootstrap support for L0PHV6 as seed ortholog is 100%.
Bootstrap support for F1S4I0 as seed ortholog is 100%.

Group of orthologs #1265. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 S.scrofa:74

L0P9V4              	100.00%		F1SMW5              	100.00%
Bootstrap support for L0P9V4 as seed ortholog is 100%.
Bootstrap support for F1SMW5 as seed ortholog is 100%.

Group of orthologs #1266. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 S.scrofa:74

L0P7K1              	100.00%		F2Z5C8              	100.00%
Bootstrap support for L0P7K1 as seed ortholog is 100%.
Bootstrap support for F2Z5C8 as seed ortholog is 100%.

Group of orthologs #1267. Best score 73 bits
Score difference with first non-orthologous sequence - P.jiroveci:73 S.scrofa:73

L0PCB6              	100.00%		F1SD37              	100.00%
                    	       		I3LKK8              	69.88%
Bootstrap support for L0PCB6 as seed ortholog is 100%.
Bootstrap support for F1SD37 as seed ortholog is 100%.

Group of orthologs #1268. Best score 73 bits
Score difference with first non-orthologous sequence - P.jiroveci:73 S.scrofa:73

L0PG35              	100.00%		F1RZT2              	100.00%
Bootstrap support for L0PG35 as seed ortholog is 100%.
Bootstrap support for F1RZT2 as seed ortholog is 100%.

Group of orthologs #1269. Best score 73 bits
Score difference with first non-orthologous sequence - P.jiroveci:73 S.scrofa:73

L0PEQ6              	100.00%		F1SUQ0              	100.00%
Bootstrap support for L0PEQ6 as seed ortholog is 100%.
Bootstrap support for F1SUQ0 as seed ortholog is 100%.

Group of orthologs #1270. Best score 73 bits
Score difference with first non-orthologous sequence - P.jiroveci:73 S.scrofa:73

L0PEG8              	100.00%		I3LD01              	100.00%
Bootstrap support for L0PEG8 as seed ortholog is 100%.
Bootstrap support for I3LD01 as seed ortholog is 100%.

Group of orthologs #1271. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 S.scrofa:72

L0P831              	100.00%		F1RN67              	100.00%
L0PDC1              	42.12%		
Bootstrap support for L0P831 as seed ortholog is 100%.
Bootstrap support for F1RN67 as seed ortholog is 100%.

Group of orthologs #1272. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 S.scrofa:16

L0PD48              	100.00%		F1SUH3              	100.00%
L0PGS1              	6.28%		
Bootstrap support for L0PD48 as seed ortholog is 100%.
Bootstrap support for F1SUH3 as seed ortholog is 70%.
Alternative seed ortholog is F1RLZ8 (16 bits away from this cluster)

Group of orthologs #1273. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 S.scrofa:71

L0P9N5              	100.00%		I3LIK7              	100.00%
                    	       		Q4GWZ2              	50.12%
                    	       		F1SJR1              	30.39%
                    	       		F1S1E3              	24.59%
                    	       		I3L6M5              	11.60%
Bootstrap support for L0P9N5 as seed ortholog is 100%.
Bootstrap support for I3LIK7 as seed ortholog is 100%.

Group of orthologs #1274. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 S.scrofa:71

L0PBP5              	100.00%		F1STF7              	100.00%
                    	       		F1RVI2              	47.83%
Bootstrap support for L0PBP5 as seed ortholog is 100%.
Bootstrap support for F1STF7 as seed ortholog is 100%.

Group of orthologs #1275. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 S.scrofa:71

L0PAF5              	100.00%		F1SNG8              	100.00%
Bootstrap support for L0PAF5 as seed ortholog is 100%.
Bootstrap support for F1SNG8 as seed ortholog is 100%.

Group of orthologs #1276. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 S.scrofa:71

L0PDR2              	100.00%		F1SLL4              	100.00%
Bootstrap support for L0PDR2 as seed ortholog is 100%.
Bootstrap support for F1SLL4 as seed ortholog is 100%.

Group of orthologs #1277. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 S.scrofa:71

L0P8J7              	100.00%		I3LLW3              	100.00%
Bootstrap support for L0P8J7 as seed ortholog is 100%.
Bootstrap support for I3LLW3 as seed ortholog is 100%.

Group of orthologs #1278. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 S.scrofa:71

L0PFF1              	100.00%		Q2F7Z4              	100.00%
Bootstrap support for L0PFF1 as seed ortholog is 100%.
Bootstrap support for Q2F7Z4 as seed ortholog is 100%.

Group of orthologs #1279. Best score 70 bits
Score difference with first non-orthologous sequence - P.jiroveci:70 S.scrofa:70

L0PAE0              	100.00%		F1RK20              	100.00%
                    	       		F1SS95              	21.23%
Bootstrap support for L0PAE0 as seed ortholog is 100%.
Bootstrap support for F1RK20 as seed ortholog is 100%.

Group of orthologs #1280. Best score 70 bits
Score difference with first non-orthologous sequence - P.jiroveci:70 S.scrofa:24

L0PEF8              	100.00%		F1SMS0              	100.00%
                    	       		I3LF85              	100.00%
Bootstrap support for L0PEF8 as seed ortholog is 100%.
Bootstrap support for F1SMS0 as seed ortholog is 72%.
Alternative seed ortholog is I3LI83 (24 bits away from this cluster)
Bootstrap support for I3LF85 as seed ortholog is 75%.

Group of orthologs #1281. Best score 69 bits
Score difference with first non-orthologous sequence - P.jiroveci:69 S.scrofa:69

L0PCJ4              	100.00%		F1RLH7              	100.00%
                    	       		F1REZ9              	72.36%
Bootstrap support for L0PCJ4 as seed ortholog is 100%.
Bootstrap support for F1RLH7 as seed ortholog is 100%.

Group of orthologs #1282. Best score 69 bits
Score difference with first non-orthologous sequence - P.jiroveci:69 S.scrofa:69

L0PBA0              	100.00%		F1RTK6              	100.00%
Bootstrap support for L0PBA0 as seed ortholog is 100%.
Bootstrap support for F1RTK6 as seed ortholog is 100%.

Group of orthologs #1283. Best score 69 bits
Score difference with first non-orthologous sequence - P.jiroveci:69 S.scrofa:69

L0P9X6              	100.00%		I3L5D0              	100.00%
Bootstrap support for L0P9X6 as seed ortholog is 100%.
Bootstrap support for I3L5D0 as seed ortholog is 100%.

Group of orthologs #1284. Best score 68 bits
Score difference with first non-orthologous sequence - P.jiroveci:68 S.scrofa:68

L0PDW6              	100.00%		F1S496              	100.00%
Bootstrap support for L0PDW6 as seed ortholog is 100%.
Bootstrap support for F1S496 as seed ortholog is 100%.

Group of orthologs #1285. Best score 68 bits
Score difference with first non-orthologous sequence - P.jiroveci:68 S.scrofa:68

L0PAE3              	100.00%		F1SIG0              	100.00%
Bootstrap support for L0PAE3 as seed ortholog is 100%.
Bootstrap support for F1SIG0 as seed ortholog is 100%.

Group of orthologs #1286. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 S.scrofa:67

L0PA76              	100.00%		F1S9K9              	100.00%
                    	       		I3LHP2              	10.81%
                    	       		F1RSG9              	8.85%
Bootstrap support for L0PA76 as seed ortholog is 100%.
Bootstrap support for F1S9K9 as seed ortholog is 100%.

Group of orthologs #1287. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 S.scrofa:67

L0PGV7              	100.00%		F1RJI6              	100.00%
L0PD85              	91.85%		
Bootstrap support for L0PGV7 as seed ortholog is 100%.
Bootstrap support for F1RJI6 as seed ortholog is 100%.

Group of orthologs #1288. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 S.scrofa:67

L0P9M2              	100.00%		F1RM40              	100.00%
Bootstrap support for L0P9M2 as seed ortholog is 100%.
Bootstrap support for F1RM40 as seed ortholog is 100%.

Group of orthologs #1289. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 S.scrofa:67

L0PGR8              	100.00%		F1RG72              	100.00%
Bootstrap support for L0PGR8 as seed ortholog is 100%.
Bootstrap support for F1RG72 as seed ortholog is 100%.

Group of orthologs #1290. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 S.scrofa:67

L0PFN7              	100.00%		F1RHW0              	100.00%
Bootstrap support for L0PFN7 as seed ortholog is 100%.
Bootstrap support for F1RHW0 as seed ortholog is 100%.

Group of orthologs #1291. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 S.scrofa:67

L0P937              	100.00%		F1S049              	100.00%
Bootstrap support for L0P937 as seed ortholog is 100%.
Bootstrap support for F1S049 as seed ortholog is 100%.

Group of orthologs #1292. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 S.scrofa:67

L0PBY4              	100.00%		F1SES4              	100.00%
Bootstrap support for L0PBY4 as seed ortholog is 100%.
Bootstrap support for F1SES4 as seed ortholog is 100%.

Group of orthologs #1293. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 S.scrofa:67

L0PGG4              	100.00%		F2Z5P9              	100.00%
Bootstrap support for L0PGG4 as seed ortholog is 100%.
Bootstrap support for F2Z5P9 as seed ortholog is 100%.

Group of orthologs #1294. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 S.scrofa:67

L0PEU8              	100.00%		I3LGL8              	100.00%
Bootstrap support for L0PEU8 as seed ortholog is 100%.
Bootstrap support for I3LGL8 as seed ortholog is 100%.

Group of orthologs #1295. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 S.scrofa:67

L0PFW4              	100.00%		I3LM57              	100.00%
Bootstrap support for L0PFW4 as seed ortholog is 100%.
Bootstrap support for I3LM57 as seed ortholog is 100%.

Group of orthologs #1296. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 S.scrofa:11

L0PBA1              	100.00%		I3LTG9              	100.00%
Bootstrap support for L0PBA1 as seed ortholog is 100%.
Bootstrap support for I3LTG9 as seed ortholog is 65%.
Alternative seed ortholog is F1S262 (11 bits away from this cluster)

Group of orthologs #1297. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 S.scrofa:21

L0PFT1              	100.00%		I3LAE9              	100.00%
                    	       		F1RY92              	89.32%
                    	       		F1S4R5              	30.60%
                    	       		F1S0E2              	6.05%
Bootstrap support for L0PFT1 as seed ortholog is 100%.
Bootstrap support for I3LAE9 as seed ortholog is 78%.

Group of orthologs #1298. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 S.scrofa:66

L0PAG5              	100.00%		I3LMR9              	100.00%
                    	       		I3LMK0              	96.24%
Bootstrap support for L0PAG5 as seed ortholog is 100%.
Bootstrap support for I3LMR9 as seed ortholog is 100%.

Group of orthologs #1299. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 S.scrofa:66

L0PAE2              	100.00%		I3L707              	100.00%
Bootstrap support for L0PAE2 as seed ortholog is 100%.
Bootstrap support for I3L707 as seed ortholog is 100%.

Group of orthologs #1300. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 S.scrofa:66

L0PH05              	100.00%		I3LU08              	100.00%
Bootstrap support for L0PH05 as seed ortholog is 100%.
Bootstrap support for I3LU08 as seed ortholog is 100%.

Group of orthologs #1301. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 S.scrofa:64

L0PAZ6              	100.00%		F1RQV6              	100.00%
                    	       		F1S8R3              	52.26%
                    	       		F1S2M8              	18.58%
Bootstrap support for L0PAZ6 as seed ortholog is 100%.
Bootstrap support for F1RQV6 as seed ortholog is 100%.

Group of orthologs #1302. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 S.scrofa:4

L0P8G6              	100.00%		F1S1B9              	100.00%
                    	       		F1RL81              	8.31%
                    	       		Q29529              	5.62%
Bootstrap support for L0P8G6 as seed ortholog is 100%.
Bootstrap support for F1S1B9 as seed ortholog is 54%.
Alternative seed ortholog is F1SLF0 (4 bits away from this cluster)

Group of orthologs #1303. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 S.scrofa:64

L0P9V1              	100.00%		B2CPJ7              	100.00%
Bootstrap support for L0P9V1 as seed ortholog is 100%.
Bootstrap support for B2CPJ7 as seed ortholog is 100%.

Group of orthologs #1304. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 S.scrofa:64

L0PEH0              	100.00%		F1S771              	100.00%
Bootstrap support for L0PEH0 as seed ortholog is 100%.
Bootstrap support for F1S771 as seed ortholog is 100%.

Group of orthologs #1305. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 S.scrofa:64

L0PCN6              	100.00%		F1SU70              	100.00%
Bootstrap support for L0PCN6 as seed ortholog is 100%.
Bootstrap support for F1SU70 as seed ortholog is 100%.

Group of orthologs #1306. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 S.scrofa:64

L0PFH5              	100.00%		I3LAL9              	100.00%
Bootstrap support for L0PFH5 as seed ortholog is 100%.
Bootstrap support for I3LAL9 as seed ortholog is 100%.

Group of orthologs #1307. Best score 63 bits
Score difference with first non-orthologous sequence - P.jiroveci:63 S.scrofa:23

L0PBK6              	100.00%		F1S3X2              	100.00%
                    	       		I3LEI7              	99.08%
                    	       		Q8SPK1              	99.08%
                    	       		Q8SPK0              	97.61%
                    	       		Q9GJX5              	86.56%
                    	       		F1S3X0              	84.16%
                    	       		F1SAG6              	80.66%
                    	       		F1S3X1              	78.64%
                    	       		I3L8E6              	65.75%
                    	       		F1S3W8              	53.22%
                    	       		I3LF61              	46.59%
                    	       		F1S9Z9              	42.73%
                    	       		I3LIR7              	42.54%
                    	       		I3LHS9              	30.76%
                    	       		F1S984              	6.08%
Bootstrap support for L0PBK6 as seed ortholog is 100%.
Bootstrap support for F1S3X2 as seed ortholog is 76%.

Group of orthologs #1308. Best score 63 bits
Score difference with first non-orthologous sequence - P.jiroveci:63 S.scrofa:16

L0PAD3              	100.00%		Q06AA0              	100.00%
L0PB78              	100.00%		Q06A99              	100.00%
                    	       		F1S4B2              	39.48%
                    	       		Q3YLA6              	17.46%
                    	       		F1RJJ0              	11.26%
                    	       		Q06A98              	7.83%
Bootstrap support for L0PAD3 as seed ortholog is 100%.
Bootstrap support for L0PB78 as seed ortholog is 100%.
Bootstrap support for Q06AA0 as seed ortholog is 60%.
Alternative seed ortholog is D3K5N7 (16 bits away from this cluster)
Bootstrap support for Q06A99 as seed ortholog is 67%.
Alternative seed ortholog is D3K5N7 (16 bits away from this cluster)

Group of orthologs #1309. Best score 63 bits
Score difference with first non-orthologous sequence - P.jiroveci:63 S.scrofa:63

L0PF40              	100.00%		F1RT80              	100.00%
                    	       		I3LE59              	10.55%
Bootstrap support for L0PF40 as seed ortholog is 100%.
Bootstrap support for F1RT80 as seed ortholog is 100%.

Group of orthologs #1310. Best score 63 bits
Score difference with first non-orthologous sequence - P.jiroveci:63 S.scrofa:63

L0PG83              	100.00%		F1SDW3              	100.00%
Bootstrap support for L0PG83 as seed ortholog is 100%.
Bootstrap support for F1SDW3 as seed ortholog is 100%.

Group of orthologs #1311. Best score 62 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 S.scrofa:15

L0PEB3              	100.00%		F1RPV2              	100.00%
                    	       		F1SBY3              	53.91%
Bootstrap support for L0PEB3 as seed ortholog is 100%.
Bootstrap support for F1RPV2 as seed ortholog is 74%.
Alternative seed ortholog is F1RQI9 (15 bits away from this cluster)

Group of orthologs #1312. Best score 62 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 S.scrofa:62

L0P9R4              	100.00%		B8Y649              	100.00%
Bootstrap support for L0P9R4 as seed ortholog is 100%.
Bootstrap support for B8Y649 as seed ortholog is 100%.

Group of orthologs #1313. Best score 62 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 S.scrofa:62

L0P8D1              	100.00%		F1RVX4              	100.00%
Bootstrap support for L0P8D1 as seed ortholog is 100%.
Bootstrap support for F1RVX4 as seed ortholog is 100%.

Group of orthologs #1314. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 S.scrofa:61

L0PDL3              	100.00%		F1RFM4              	100.00%
Bootstrap support for L0PDL3 as seed ortholog is 100%.
Bootstrap support for F1RFM4 as seed ortholog is 100%.

Group of orthologs #1315. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 S.scrofa:61

L0P8X1              	100.00%		F1RX86              	100.00%
Bootstrap support for L0P8X1 as seed ortholog is 100%.
Bootstrap support for F1RX86 as seed ortholog is 100%.

Group of orthologs #1316. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 S.scrofa:61

L0PAF1              	100.00%		I3LT93              	100.00%
Bootstrap support for L0PAF1 as seed ortholog is 100%.
Bootstrap support for I3LT93 as seed ortholog is 100%.

Group of orthologs #1317. Best score 60 bits
Score difference with first non-orthologous sequence - P.jiroveci:60 S.scrofa:60

L0P7U7              	100.00%		Q5S3G4              	100.00%
                    	       		F1RP62              	47.57%
Bootstrap support for L0P7U7 as seed ortholog is 100%.
Bootstrap support for Q5S3G4 as seed ortholog is 100%.

Group of orthologs #1318. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 S.scrofa:59

L0PC15              	100.00%		D3K5L0              	100.00%
                    	       		I3L5K3              	28.70%
                    	       		F1RW28              	28.52%
                    	       		F1RF61              	18.05%
Bootstrap support for L0PC15 as seed ortholog is 100%.
Bootstrap support for D3K5L0 as seed ortholog is 100%.

Group of orthologs #1319. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 S.scrofa:59

L0PEN9              	100.00%		I3LFI9              	100.00%
                    	       		I3LNZ3              	15.77%
Bootstrap support for L0PEN9 as seed ortholog is 100%.
Bootstrap support for I3LFI9 as seed ortholog is 100%.

Group of orthologs #1320. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 S.scrofa:59

L0PAI3              	100.00%		F1RJI8              	100.00%
Bootstrap support for L0PAI3 as seed ortholog is 100%.
Bootstrap support for F1RJI8 as seed ortholog is 100%.

Group of orthologs #1321. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 S.scrofa:59

L0PBW6              	100.00%		F1RMB0              	100.00%
Bootstrap support for L0PBW6 as seed ortholog is 100%.
Bootstrap support for F1RMB0 as seed ortholog is 100%.

Group of orthologs #1322. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 S.scrofa:59

L0PB06              	100.00%		F1RP28              	100.00%
Bootstrap support for L0PB06 as seed ortholog is 100%.
Bootstrap support for F1RP28 as seed ortholog is 100%.

Group of orthologs #1323. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 S.scrofa:59

L0P9U7              	100.00%		F1S2B1              	100.00%
Bootstrap support for L0P9U7 as seed ortholog is 100%.
Bootstrap support for F1S2B1 as seed ortholog is 100%.

Group of orthologs #1324. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 S.scrofa:59

L0PDY5              	100.00%		F1S4M9              	100.00%
Bootstrap support for L0PDY5 as seed ortholog is 100%.
Bootstrap support for F1S4M9 as seed ortholog is 100%.

Group of orthologs #1325. Best score 58 bits
Score difference with first non-orthologous sequence - P.jiroveci:58 S.scrofa:58

L0PE07              	100.00%		F1RVX6              	100.00%
Bootstrap support for L0PE07 as seed ortholog is 100%.
Bootstrap support for F1RVX6 as seed ortholog is 100%.

Group of orthologs #1326. Best score 58 bits
Score difference with first non-orthologous sequence - P.jiroveci:58 S.scrofa:58

L0PFE5              	100.00%		F1RU32              	100.00%
Bootstrap support for L0PFE5 as seed ortholog is 100%.
Bootstrap support for F1RU32 as seed ortholog is 100%.

Group of orthologs #1327. Best score 58 bits
Score difference with first non-orthologous sequence - P.jiroveci:58 S.scrofa:58

L0PFR5              	100.00%		F1S283              	100.00%
Bootstrap support for L0PFR5 as seed ortholog is 100%.
Bootstrap support for F1S283 as seed ortholog is 100%.

Group of orthologs #1328. Best score 58 bits
Score difference with first non-orthologous sequence - P.jiroveci:58 S.scrofa:58

L0P9H6              	100.00%		F1SDF8              	100.00%
Bootstrap support for L0P9H6 as seed ortholog is 100%.
Bootstrap support for F1SDF8 as seed ortholog is 100%.

Group of orthologs #1329. Best score 57 bits
Score difference with first non-orthologous sequence - P.jiroveci:4 S.scrofa:57

L0PBB5              	100.00%		I3LE77              	100.00%
                    	       		P17741              	33.02%
                    	       		P12682              	30.25%
                    	       		F1RVC4              	28.70%
                    	       		F1RQ19              	28.40%
                    	       		I3LKF1              	25.00%
Bootstrap support for L0PBB5 as seed ortholog is 55%.
Alternative seed ortholog is L0PDF6 (4 bits away from this cluster)
Bootstrap support for I3LE77 as seed ortholog is 100%.

Group of orthologs #1330. Best score 57 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 S.scrofa:57

L0P8R3              	100.00%		A5GZW8              	100.00%
L0PB56              	100.00%		
Bootstrap support for L0P8R3 as seed ortholog is 100%.
Bootstrap support for L0PB56 as seed ortholog is 100%.
Bootstrap support for A5GZW8 as seed ortholog is 100%.

Group of orthologs #1331. Best score 57 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 S.scrofa:57

L0PGI1              	100.00%		Q684M6              	100.00%
                    	       		F1SK44              	23.08%
Bootstrap support for L0PGI1 as seed ortholog is 100%.
Bootstrap support for Q684M6 as seed ortholog is 100%.

Group of orthologs #1332. Best score 57 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 S.scrofa:57

L0PFE2              	100.00%		F1SG02              	100.00%
Bootstrap support for L0PFE2 as seed ortholog is 100%.
Bootstrap support for F1SG02 as seed ortholog is 100%.

Group of orthologs #1333. Best score 57 bits
Score difference with first non-orthologous sequence - P.jiroveci:16 S.scrofa:57

L0PE59              	100.00%		F1SLA7              	100.00%
Bootstrap support for L0PE59 as seed ortholog is 73%.
Alternative seed ortholog is L0PEI1 (16 bits away from this cluster)
Bootstrap support for F1SLA7 as seed ortholog is 100%.

Group of orthologs #1334. Best score 57 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 S.scrofa:57

L0P9P1              	100.00%		F2Z518              	100.00%
Bootstrap support for L0P9P1 as seed ortholog is 100%.
Bootstrap support for F2Z518 as seed ortholog is 100%.

Group of orthologs #1335. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 S.scrofa:56

L0PB91              	100.00%		F1S5F3              	100.00%
                    	       		Q9TSV6              	46.51%
                    	       		F1RUF1              	25.00%
                    	       		F1SMJ9              	19.19%
Bootstrap support for L0PB91 as seed ortholog is 100%.
Bootstrap support for F1S5F3 as seed ortholog is 100%.

Group of orthologs #1336. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 S.scrofa:56

L0PFV5              	100.00%		F1SDA7              	100.00%
Bootstrap support for L0PFV5 as seed ortholog is 100%.
Bootstrap support for F1SDA7 as seed ortholog is 100%.

Group of orthologs #1337. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 S.scrofa:56

L0PD80              	100.00%		F1STD9              	100.00%
Bootstrap support for L0PD80 as seed ortholog is 100%.
Bootstrap support for F1STD9 as seed ortholog is 100%.

Group of orthologs #1338. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 S.scrofa:56

L0P8K9              	100.00%		I3LAH2              	100.00%
Bootstrap support for L0P8K9 as seed ortholog is 100%.
Bootstrap support for I3LAH2 as seed ortholog is 100%.

Group of orthologs #1339. Best score 55 bits
Score difference with first non-orthologous sequence - P.jiroveci:55 S.scrofa:55

L0PHJ4              	100.00%		F1RZH8              	100.00%
Bootstrap support for L0PHJ4 as seed ortholog is 100%.
Bootstrap support for F1RZH8 as seed ortholog is 100%.

Group of orthologs #1340. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 S.scrofa:54

L0PAQ5              	100.00%		I3LRE0              	100.00%
                    	       		F1S2A8              	38.28%
Bootstrap support for L0PAQ5 as seed ortholog is 100%.
Bootstrap support for I3LRE0 as seed ortholog is 100%.

Group of orthologs #1341. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 S.scrofa:54

L0P8S6              	100.00%		I3LM75              	100.00%
Bootstrap support for L0P8S6 as seed ortholog is 100%.
Bootstrap support for I3LM75 as seed ortholog is 100%.

Group of orthologs #1342. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 S.scrofa:54

L0PAG3              	100.00%		I3LKZ6              	100.00%
Bootstrap support for L0PAG3 as seed ortholog is 100%.
Bootstrap support for I3LKZ6 as seed ortholog is 100%.

Group of orthologs #1343. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 S.scrofa:54

L0PAH6              	100.00%		Q2EN79              	100.00%
Bootstrap support for L0PAH6 as seed ortholog is 100%.
Bootstrap support for Q2EN79 as seed ortholog is 100%.

Group of orthologs #1344. Best score 53 bits
Score difference with first non-orthologous sequence - P.jiroveci:53 S.scrofa:53

L0P7Q2              	100.00%		F1S7J4              	100.00%
Bootstrap support for L0P7Q2 as seed ortholog is 100%.
Bootstrap support for F1S7J4 as seed ortholog is 100%.

Group of orthologs #1345. Best score 53 bits
Score difference with first non-orthologous sequence - P.jiroveci:53 S.scrofa:53

L0P9J8              	100.00%		F1SI91              	100.00%
Bootstrap support for L0P9J8 as seed ortholog is 100%.
Bootstrap support for F1SI91 as seed ortholog is 100%.

Group of orthologs #1346. Best score 52 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 S.scrofa:52

L0P9Q7              	100.00%		F1S2N5              	25.86%
L0PD70              	100.00%		F1RKA1              	100.00%
L0PC29              	50.15%		I3LK91              	7.76%
Bootstrap support for L0P9Q7 as seed ortholog is 100%.
Bootstrap support for L0PD70 as seed ortholog is 100%.
Bootstrap support for F1RKA1 as seed ortholog is 100%.

Group of orthologs #1347. Best score 52 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 S.scrofa:52

L0PE69              	100.00%		F1S8U4              	100.00%
Bootstrap support for L0PE69 as seed ortholog is 100%.
Bootstrap support for F1S8U4 as seed ortholog is 100%.

Group of orthologs #1348. Best score 52 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 S.scrofa:52

L0P9P5              	100.00%		F1SST1              	100.00%
Bootstrap support for L0P9P5 as seed ortholog is 100%.
Bootstrap support for F1SST1 as seed ortholog is 100%.

Group of orthologs #1349. Best score 52 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 S.scrofa:52

L0PGU4              	100.00%		I3LKB0              	100.00%
Bootstrap support for L0PGU4 as seed ortholog is 100%.
Bootstrap support for I3LKB0 as seed ortholog is 100%.

Group of orthologs #1350. Best score 52 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 S.scrofa:52

L0PD64              	100.00%		I3LVJ6              	100.00%
Bootstrap support for L0PD64 as seed ortholog is 100%.
Bootstrap support for I3LVJ6 as seed ortholog is 100%.

Group of orthologs #1351. Best score 51 bits
Score difference with first non-orthologous sequence - P.jiroveci:51 S.scrofa:51

L0P994              	100.00%		F1SPV5              	100.00%
                    	       		I3L7N1              	69.23%
                    	       		F1SPW5              	56.83%
                    	       		F1SPW6              	54.47%
                    	       		F1SPV9              	52.59%
                    	       		F1SPW4              	49.29%
                    	       		F1SPV4              	46.94%
                    	       		F1SPW2              	46.15%
                    	       		F1SPV8              	45.37%
                    	       		K7GRC8              	40.35%
                    	       		F1RQ68              	36.89%
                    	       		I3LH71              	36.58%
                    	       		K7GMH2              	35.64%
                    	       		F1S2C8              	26.53%
                    	       		F1RQ35              	26.37%
                    	       		F1RQ45              	25.43%
                    	       		F1SNQ4              	25.12%
                    	       		F1RQ36              	25.12%
                    	       		F1SG84              	23.86%
                    	       		F1RQ31              	23.08%
                    	       		F1RUE9              	22.61%
Bootstrap support for L0P994 as seed ortholog is 100%.
Bootstrap support for F1SPV5 as seed ortholog is 100%.

Group of orthologs #1352. Best score 51 bits
Score difference with first non-orthologous sequence - P.jiroveci:51 S.scrofa:51

L0PE16              	100.00%		F1S2G3              	100.00%
Bootstrap support for L0PE16 as seed ortholog is 100%.
Bootstrap support for F1S2G3 as seed ortholog is 100%.

Group of orthologs #1353. Best score 51 bits
Score difference with first non-orthologous sequence - P.jiroveci:51 S.scrofa:51

L0PE65              	100.00%		F1STK9              	100.00%
Bootstrap support for L0PE65 as seed ortholog is 100%.
Bootstrap support for F1STK9 as seed ortholog is 100%.

Group of orthologs #1354. Best score 51 bits
Score difference with first non-orthologous sequence - P.jiroveci:51 S.scrofa:51

L0PF85              	100.00%		F2Z5J7              	100.00%
Bootstrap support for L0PF85 as seed ortholog is 100%.
Bootstrap support for F2Z5J7 as seed ortholog is 100%.

Group of orthologs #1355. Best score 50 bits
Score difference with first non-orthologous sequence - P.jiroveci:50 S.scrofa:50

L0P7J7              	100.00%		I3LV12              	100.00%
                    	       		F1SQY0              	60.91%
Bootstrap support for L0P7J7 as seed ortholog is 100%.
Bootstrap support for I3LV12 as seed ortholog is 100%.

Group of orthologs #1356. Best score 49 bits
Score difference with first non-orthologous sequence - P.jiroveci:49 S.scrofa:49

L0PEE9              	100.00%		B9TRX0              	100.00%
                    	       		I3LS40              	27.73%
Bootstrap support for L0PEE9 as seed ortholog is 100%.
Bootstrap support for B9TRX0 as seed ortholog is 100%.

Group of orthologs #1357. Best score 49 bits
Score difference with first non-orthologous sequence - P.jiroveci:49 S.scrofa:49

L0PDE0              	100.00%		F1RRE7              	100.00%
                    	       		F1SV31              	43.16%
Bootstrap support for L0PDE0 as seed ortholog is 100%.
Bootstrap support for F1RRE7 as seed ortholog is 100%.

Group of orthologs #1358. Best score 49 bits
Score difference with first non-orthologous sequence - P.jiroveci:49 S.scrofa:49

L0PFN8              	100.00%		F1RTV5              	100.00%
Bootstrap support for L0PFN8 as seed ortholog is 100%.
Bootstrap support for F1RTV5 as seed ortholog is 100%.

Group of orthologs #1359. Best score 49 bits
Score difference with first non-orthologous sequence - P.jiroveci:49 S.scrofa:49

L0P7Q6              	100.00%		F1SJ03              	100.00%
Bootstrap support for L0P7Q6 as seed ortholog is 100%.
Bootstrap support for F1SJ03 as seed ortholog is 100%.

Group of orthologs #1360. Best score 49 bits
Score difference with first non-orthologous sequence - P.jiroveci:49 S.scrofa:49

L0PFU6              	100.00%		F1SDD7              	100.00%
Bootstrap support for L0PFU6 as seed ortholog is 100%.
Bootstrap support for F1SDD7 as seed ortholog is 100%.

Group of orthologs #1361. Best score 49 bits
Score difference with first non-orthologous sequence - P.jiroveci:49 S.scrofa:49

L0PAD1              	100.00%		I3LIQ3              	100.00%
Bootstrap support for L0PAD1 as seed ortholog is 100%.
Bootstrap support for I3LIQ3 as seed ortholog is 100%.

Group of orthologs #1362. Best score 48 bits
Score difference with first non-orthologous sequence - P.jiroveci:48 S.scrofa:48

L0PG69              	100.00%		F1RT89              	100.00%
                    	       		F1SK35              	100.00%
                    	       		F1S2T8              	73.04%
                    	       		F1SDS2              	19.85%
                    	       		F1RTA5              	11.26%
Bootstrap support for L0PG69 as seed ortholog is 100%.
Bootstrap support for F1RT89 as seed ortholog is 100%.
Bootstrap support for F1SK35 as seed ortholog is 100%.

Group of orthologs #1363. Best score 48 bits
Score difference with first non-orthologous sequence - P.jiroveci:48 S.scrofa:48

L0P9L4              	100.00%		F1RSC8              	100.00%
Bootstrap support for L0P9L4 as seed ortholog is 100%.
Bootstrap support for F1RSC8 as seed ortholog is 100%.

Group of orthologs #1364. Best score 48 bits
Score difference with first non-orthologous sequence - P.jiroveci:48 S.scrofa:48

L0PH50              	100.00%		F1RRK5              	100.00%
Bootstrap support for L0PH50 as seed ortholog is 100%.
Bootstrap support for F1RRK5 as seed ortholog is 100%.

Group of orthologs #1365. Best score 48 bits
Score difference with first non-orthologous sequence - P.jiroveci:48 S.scrofa:48

L0PGC3              	100.00%		I3L723              	100.00%
Bootstrap support for L0PGC3 as seed ortholog is 100%.
Bootstrap support for I3L723 as seed ortholog is 100%.

Group of orthologs #1366. Best score 47 bits
Score difference with first non-orthologous sequence - P.jiroveci:47 S.scrofa:47

L0PCQ9              	100.00%		F1RK35              	100.00%
                    	       		F1RK36              	66.06%
                    	       		F1SI60              	17.22%
                    	       		F1RNP1              	16.62%
                    	       		F1S1S1              	16.62%
                    	       		I3L7Q0              	16.31%
                    	       		I3LP64              	16.21%
                    	       		F1SV80              	16.21%
                    	       		F1SAJ7              	15.51%
                    	       		F1SAJ8              	15.11%
                    	       		F1SS53              	15.11%
                    	       		F1S1R6              	15.01%
                    	       		F1SC23              	14.70%
                    	       		F1RPG2              	14.40%
                    	       		F1RGZ4              	14.00%
                    	       		I3LA17              	14.00%
                    	       		F1RHL6              	13.49%
                    	       		F1SDE5              	13.39%
                    	       		F1S1R9              	12.79%
                    	       		I3LAS9              	11.98%
                    	       		I3LGC5              	11.08%
                    	       		F1S2N9              	10.98%
                    	       		F1RFY7              	10.37%
                    	       		F1RK39              	10.07%
                    	       		F1S2B4              	10.07%
                    	       		F1SCQ2              	9.97%
                    	       		F1SKC8              	7.65%
                    	       		F1RMW5              	7.65%
                    	       		F1RMF1              	5.54%
                    	       		F1SA71              	5.24%
Bootstrap support for L0PCQ9 as seed ortholog is 100%.
Bootstrap support for F1RK35 as seed ortholog is 100%.

Group of orthologs #1367. Best score 47 bits
Score difference with first non-orthologous sequence - P.jiroveci:47 S.scrofa:47

L0P9B7              	100.00%		F1SDJ4              	100.00%
Bootstrap support for L0P9B7 as seed ortholog is 100%.
Bootstrap support for F1SDJ4 as seed ortholog is 100%.

Group of orthologs #1368. Best score 46 bits
Score difference with first non-orthologous sequence - P.jiroveci:46 S.scrofa:46

L0P9T4              	100.00%		F1RJN1              	100.00%
L0PFA0              	100.00%		
Bootstrap support for L0P9T4 as seed ortholog is 100%.
Bootstrap support for L0PFA0 as seed ortholog is 100%.
Bootstrap support for F1RJN1 as seed ortholog is 100%.

Group of orthologs #1369. Best score 46 bits
Score difference with first non-orthologous sequence - P.jiroveci:46 S.scrofa:46

L0P8C5              	100.00%		F1RYS1              	100.00%
L0P7X3              	63.04%		
Bootstrap support for L0P8C5 as seed ortholog is 100%.
Bootstrap support for F1RYS1 as seed ortholog is 100%.

Group of orthologs #1370. Best score 46 bits
Score difference with first non-orthologous sequence - P.jiroveci:46 S.scrofa:46

L0PGZ4              	100.00%		D0G6S1              	100.00%
Bootstrap support for L0PGZ4 as seed ortholog is 100%.
Bootstrap support for D0G6S1 as seed ortholog is 100%.

Group of orthologs #1371. Best score 46 bits
Score difference with first non-orthologous sequence - P.jiroveci:46 S.scrofa:46

L0P9H2              	100.00%		F1S8Q2              	100.00%
Bootstrap support for L0P9H2 as seed ortholog is 100%.
Bootstrap support for F1S8Q2 as seed ortholog is 100%.

Group of orthologs #1372. Best score 46 bits
Score difference with first non-orthologous sequence - P.jiroveci:46 S.scrofa:46

L0P881              	100.00%		F1SLG8              	100.00%
Bootstrap support for L0P881 as seed ortholog is 100%.
Bootstrap support for F1SLG8 as seed ortholog is 100%.

Group of orthologs #1373. Best score 45 bits
Score difference with first non-orthologous sequence - P.jiroveci:45 S.scrofa:45

L0PDU8              	100.00%		I3L9I3              	100.00%
                    	       		I3LKH9              	60.93%
                    	       		I3LFM3              	16.03%
Bootstrap support for L0PDU8 as seed ortholog is 100%.
Bootstrap support for I3L9I3 as seed ortholog is 100%.

Group of orthologs #1374. Best score 45 bits
Score difference with first non-orthologous sequence - P.jiroveci:45 S.scrofa:45

L0P7T2              	100.00%		I3L7P4              	100.00%
Bootstrap support for L0P7T2 as seed ortholog is 100%.
Bootstrap support for I3L7P4 as seed ortholog is 100%.

Group of orthologs #1375. Best score 45 bits
Score difference with first non-orthologous sequence - P.jiroveci:45 S.scrofa:45

L0PFI4              	100.00%		I3LN51              	100.00%
Bootstrap support for L0PFI4 as seed ortholog is 100%.
Bootstrap support for I3LN51 as seed ortholog is 100%.

Group of orthologs #1376. Best score 45 bits
Score difference with first non-orthologous sequence - P.jiroveci:45 S.scrofa:45

L0PF02              	100.00%		I3LSZ6              	100.00%
Bootstrap support for L0PF02 as seed ortholog is 100%.
Bootstrap support for I3LSZ6 as seed ortholog is 100%.

Group of orthologs #1377. Best score 44 bits
Score difference with first non-orthologous sequence - P.jiroveci:44 S.scrofa:44

L0PD94              	100.00%		F1RZY2              	100.00%
Bootstrap support for L0PD94 as seed ortholog is 100%.
Bootstrap support for F1RZY2 as seed ortholog is 100%.

Group of orthologs #1378. Best score 43 bits
Score difference with first non-orthologous sequence - P.jiroveci:43 S.scrofa:43

L0PBX7              	100.00%		F1RIU0              	100.00%
Bootstrap support for L0PBX7 as seed ortholog is 100%.
Bootstrap support for F1RIU0 as seed ortholog is 100%.

Group of orthologs #1379. Best score 43 bits
Score difference with first non-orthologous sequence - P.jiroveci:43 S.scrofa:43

L0PFL4              	100.00%		F1S1D8              	100.00%
Bootstrap support for L0PFL4 as seed ortholog is 100%.
Bootstrap support for F1S1D8 as seed ortholog is 100%.

Group of orthologs #1380. Best score 42 bits
Score difference with first non-orthologous sequence - P.jiroveci:42 S.scrofa:42

L0PGX3              	100.00%		I3LP06              	100.00%
                    	       		F1RJ93              	57.84%
                    	       		F1SJS8              	54.01%
                    	       		I3LEJ5              	18.12%
Bootstrap support for L0PGX3 as seed ortholog is 100%.
Bootstrap support for I3LP06 as seed ortholog is 100%.

Group of orthologs #1381. Best score 42 bits
Score difference with first non-orthologous sequence - P.jiroveci:42 S.scrofa:42

L0PB71              	100.00%		F1SKT7              	100.00%
Bootstrap support for L0PB71 as seed ortholog is 100%.
Bootstrap support for F1SKT7 as seed ortholog is 100%.

Group of orthologs #1382. Best score 42 bits
Score difference with first non-orthologous sequence - P.jiroveci:42 S.scrofa:42

L0PAV1              	100.00%		I3LEJ9              	100.00%
Bootstrap support for L0PAV1 as seed ortholog is 100%.
Bootstrap support for I3LEJ9 as seed ortholog is 100%.

Group of orthologs #1383. Best score 41 bits
Score difference with first non-orthologous sequence - P.jiroveci:41 S.scrofa:41

L0P8L1              	100.00%		I3LFZ2              	100.00%
L0P714              	78.12%		
Bootstrap support for L0P8L1 as seed ortholog is 100%.
Bootstrap support for I3LFZ2 as seed ortholog is 100%.