###################################
1457 groups of orthologs
1536 in-paralogs from P.jiroveci
2190 in-paralogs from P.troglodytes
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3706 bits
Score difference with first non-orthologous sequence - P.jiroveci:3706 P.troglodytes:2357

L0PGR1              	100.00%		H2R961              	100.00%
Bootstrap support for L0PGR1 as seed ortholog is 100%.
Bootstrap support for H2R961 as seed ortholog is 100%.

Group of orthologs #2. Best score 2160 bits
Score difference with first non-orthologous sequence - P.jiroveci:2160 P.troglodytes:2160

L0PEQ1              	100.00%		H2PY03              	100.00%
Bootstrap support for L0PEQ1 as seed ortholog is 100%.
Bootstrap support for H2PY03 as seed ortholog is 100%.

Group of orthologs #3. Best score 2156 bits
Score difference with first non-orthologous sequence - P.jiroveci:2156 P.troglodytes:2156

L0PHB1              	100.00%		H2QIC8              	100.00%
Bootstrap support for L0PHB1 as seed ortholog is 100%.
Bootstrap support for H2QIC8 as seed ortholog is 100%.

Group of orthologs #4. Best score 1976 bits
Score difference with first non-orthologous sequence - P.jiroveci:1572 P.troglodytes:1412

L0PB90              	100.00%		H2R1J6              	100.00%
Bootstrap support for L0PB90 as seed ortholog is 100%.
Bootstrap support for H2R1J6 as seed ortholog is 100%.

Group of orthologs #5. Best score 1836 bits
Score difference with first non-orthologous sequence - P.jiroveci:1836 P.troglodytes:1836

L0PGI2              	100.00%		H2R9M5              	100.00%
                    	       		H2Q6U2              	58.50%
Bootstrap support for L0PGI2 as seed ortholog is 100%.
Bootstrap support for H2R9M5 as seed ortholog is 100%.

Group of orthologs #6. Best score 1830 bits
Score difference with first non-orthologous sequence - P.jiroveci:1830 P.troglodytes:1830

L0PBF5              	100.00%		H2QZP7              	100.00%
                    	       		H2QL83              	66.23%
Bootstrap support for L0PBF5 as seed ortholog is 100%.
Bootstrap support for H2QZP7 as seed ortholog is 100%.

Group of orthologs #7. Best score 1808 bits
Score difference with first non-orthologous sequence - P.jiroveci:1808 P.troglodytes:1808

L0PEL4              	100.00%		H2QTE8              	100.00%
Bootstrap support for L0PEL4 as seed ortholog is 100%.
Bootstrap support for H2QTE8 as seed ortholog is 100%.

Group of orthologs #8. Best score 1799 bits
Score difference with first non-orthologous sequence - P.jiroveci:1799 P.troglodytes:609

L0P7C3              	100.00%		H2QHM0              	100.00%
Bootstrap support for L0P7C3 as seed ortholog is 100%.
Bootstrap support for H2QHM0 as seed ortholog is 100%.

Group of orthologs #9. Best score 1606 bits
Score difference with first non-orthologous sequence - P.jiroveci:1606 P.troglodytes:1606

L0PFL5              	100.00%		H2R3W0              	100.00%
Bootstrap support for L0PFL5 as seed ortholog is 100%.
Bootstrap support for H2R3W0 as seed ortholog is 100%.

Group of orthologs #10. Best score 1472 bits
Score difference with first non-orthologous sequence - P.jiroveci:1472 P.troglodytes:1472

L0PD06              	100.00%		H2QTG4              	100.00%
Bootstrap support for L0PD06 as seed ortholog is 100%.
Bootstrap support for H2QTG4 as seed ortholog is 100%.

Group of orthologs #11. Best score 1419 bits
Score difference with first non-orthologous sequence - P.jiroveci:1419 P.troglodytes:686

L0PG77              	100.00%		H2Q6S4              	100.00%
Bootstrap support for L0PG77 as seed ortholog is 100%.
Bootstrap support for H2Q6S4 as seed ortholog is 100%.

Group of orthologs #12. Best score 1341 bits
Score difference with first non-orthologous sequence - P.jiroveci:1341 P.troglodytes:1341

L0PG53              	100.00%		H2QJ69              	100.00%
Bootstrap support for L0PG53 as seed ortholog is 100%.
Bootstrap support for H2QJ69 as seed ortholog is 100%.

Group of orthologs #13. Best score 1288 bits
Score difference with first non-orthologous sequence - P.jiroveci:1288 P.troglodytes:1288

L0PCG8              	100.00%		H2QBG5              	100.00%
Bootstrap support for L0PCG8 as seed ortholog is 100%.
Bootstrap support for H2QBG5 as seed ortholog is 100%.

Group of orthologs #14. Best score 1278 bits
Score difference with first non-orthologous sequence - P.jiroveci:882 P.troglodytes:791

L0PB43              	100.00%		H2Q251              	100.00%
Bootstrap support for L0PB43 as seed ortholog is 100%.
Bootstrap support for H2Q251 as seed ortholog is 100%.

Group of orthologs #15. Best score 1244 bits
Score difference with first non-orthologous sequence - P.jiroveci:1244 P.troglodytes:1244

L0P818              	100.00%		H2QM73              	100.00%
                    	       		H2QCW5              	21.79%
Bootstrap support for L0P818 as seed ortholog is 100%.
Bootstrap support for H2QM73 as seed ortholog is 100%.

Group of orthologs #16. Best score 1237 bits
Score difference with first non-orthologous sequence - P.jiroveci:1237 P.troglodytes:1170

L0PFU4              	100.00%		H2R0K9              	100.00%
Bootstrap support for L0PFU4 as seed ortholog is 100%.
Bootstrap support for H2R0K9 as seed ortholog is 100%.

Group of orthologs #17. Best score 1190 bits
Score difference with first non-orthologous sequence - P.jiroveci:1190 P.troglodytes:1190

L0PBY6              	100.00%		H2Q2Y0              	100.00%
Bootstrap support for L0PBY6 as seed ortholog is 100%.
Bootstrap support for H2Q2Y0 as seed ortholog is 100%.

Group of orthologs #18. Best score 1183 bits
Score difference with first non-orthologous sequence - P.jiroveci:1183 P.troglodytes:607

L0PEW0              	100.00%		H2QQX1              	100.00%
Bootstrap support for L0PEW0 as seed ortholog is 100%.
Bootstrap support for H2QQX1 as seed ortholog is 100%.

Group of orthologs #19. Best score 1161 bits
Score difference with first non-orthologous sequence - P.jiroveci:1161 P.troglodytes:1161

L0PCR2              	100.00%		H2Q0E3              	100.00%
Bootstrap support for L0PCR2 as seed ortholog is 100%.
Bootstrap support for H2Q0E3 as seed ortholog is 100%.

Group of orthologs #20. Best score 1161 bits
Score difference with first non-orthologous sequence - P.jiroveci:1161 P.troglodytes:781

L0PBE4              	100.00%		H2QD78              	100.00%
Bootstrap support for L0PBE4 as seed ortholog is 100%.
Bootstrap support for H2QD78 as seed ortholog is 100%.

Group of orthologs #21. Best score 1157 bits
Score difference with first non-orthologous sequence - P.jiroveci:1157 P.troglodytes:1157

L0P928              	100.00%		H2QFU1              	100.00%
Bootstrap support for L0P928 as seed ortholog is 100%.
Bootstrap support for H2QFU1 as seed ortholog is 100%.

Group of orthologs #22. Best score 1081 bits
Score difference with first non-orthologous sequence - P.jiroveci:571 P.troglodytes:765

L0PB13              	100.00%		H2QBH8              	100.00%
Bootstrap support for L0PB13 as seed ortholog is 100%.
Bootstrap support for H2QBH8 as seed ortholog is 100%.

Group of orthologs #23. Best score 1059 bits
Score difference with first non-orthologous sequence - P.jiroveci:1059 P.troglodytes:637

L0PG21              	100.00%		H2QQ80              	100.00%
Bootstrap support for L0PG21 as seed ortholog is 100%.
Bootstrap support for H2QQ80 as seed ortholog is 100%.

Group of orthologs #24. Best score 1036 bits
Score difference with first non-orthologous sequence - P.jiroveci:518 P.troglodytes:516

L0PAJ7              	100.00%		Q7YR39              	100.00%
Bootstrap support for L0PAJ7 as seed ortholog is 100%.
Bootstrap support for Q7YR39 as seed ortholog is 100%.

Group of orthologs #25. Best score 1009 bits
Score difference with first non-orthologous sequence - P.jiroveci:1009 P.troglodytes:1009

L0P7P6              	100.00%		H2R6T5              	100.00%
Bootstrap support for L0P7P6 as seed ortholog is 100%.
Bootstrap support for H2R6T5 as seed ortholog is 100%.

Group of orthologs #26. Best score 992 bits
Score difference with first non-orthologous sequence - P.jiroveci:992 P.troglodytes:607

L0P9P7              	100.00%		H2R8N5              	100.00%
Bootstrap support for L0P9P7 as seed ortholog is 100%.
Bootstrap support for H2R8N5 as seed ortholog is 100%.

Group of orthologs #27. Best score 977 bits
Score difference with first non-orthologous sequence - P.jiroveci:893 P.troglodytes:557

L0PAG9              	100.00%		H2R1C2              	100.00%
                    	       		H2QKK9              	50.85%
Bootstrap support for L0PAG9 as seed ortholog is 100%.
Bootstrap support for H2R1C2 as seed ortholog is 100%.

Group of orthologs #28. Best score 977 bits
Score difference with first non-orthologous sequence - P.jiroveci:430 P.troglodytes:977

L0P8X7              	100.00%		H2QD51              	100.00%
Bootstrap support for L0P8X7 as seed ortholog is 100%.
Bootstrap support for H2QD51 as seed ortholog is 100%.

Group of orthologs #29. Best score 961 bits
Score difference with first non-orthologous sequence - P.jiroveci:961 P.troglodytes:490

L0PDI4              	100.00%		H2QC84              	100.00%
                    	       		H2QAM8              	67.47%
                    	       		H2QLK6              	60.64%
                    	       		H2R5W8              	56.99%
                    	       		H2QC98              	15.56%
                    	       		H2R9J3              	14.97%
                    	       		H2QK88              	14.76%
                    	       		H2QCA0              	14.69%
                    	       		H2R2N7              	14.58%
                    	       		H2QC97              	14.48%
                    	       		H2QC99              	13.49%
                    	       		H2QCA2              	12.72%
                    	       		H2QN23              	10.90%
Bootstrap support for L0PDI4 as seed ortholog is 100%.
Bootstrap support for H2QC84 as seed ortholog is 100%.

Group of orthologs #30. Best score 958 bits
Score difference with first non-orthologous sequence - P.jiroveci:876 P.troglodytes:241

L0PG61              	100.00%		H2R475              	100.00%
                    	       		H2QPE0              	45.82%
Bootstrap support for L0PG61 as seed ortholog is 100%.
Bootstrap support for H2R475 as seed ortholog is 99%.

Group of orthologs #31. Best score 958 bits
Score difference with first non-orthologous sequence - P.jiroveci:354 P.troglodytes:243

L0PDB3              	100.00%		H2QSM5              	100.00%
Bootstrap support for L0PDB3 as seed ortholog is 100%.
Bootstrap support for H2QSM5 as seed ortholog is 99%.

Group of orthologs #32. Best score 952 bits
Score difference with first non-orthologous sequence - P.jiroveci:748 P.troglodytes:650

L0PEK6              	100.00%		H2RF71              	100.00%
                    	       		H2R7H0              	56.63%
                    	       		H2Q500              	39.81%
Bootstrap support for L0PEK6 as seed ortholog is 100%.
Bootstrap support for H2RF71 as seed ortholog is 100%.

Group of orthologs #33. Best score 946 bits
Score difference with first non-orthologous sequence - P.jiroveci:946 P.troglodytes:946

L0P915              	100.00%		H2QRQ2              	100.00%
Bootstrap support for L0P915 as seed ortholog is 100%.
Bootstrap support for H2QRQ2 as seed ortholog is 100%.

Group of orthologs #34. Best score 941 bits
Score difference with first non-orthologous sequence - P.jiroveci:941 P.troglodytes:941

L0P9F0              	100.00%		H2Q297              	100.00%
Bootstrap support for L0P9F0 as seed ortholog is 100%.
Bootstrap support for H2Q297 as seed ortholog is 100%.

Group of orthologs #35. Best score 930 bits
Score difference with first non-orthologous sequence - P.jiroveci:930 P.troglodytes:930

L0P7V0              	100.00%		H2QNH0              	100.00%
Bootstrap support for L0P7V0 as seed ortholog is 100%.
Bootstrap support for H2QNH0 as seed ortholog is 100%.

Group of orthologs #36. Best score 922 bits
Score difference with first non-orthologous sequence - P.jiroveci:922 P.troglodytes:922

L0P7R6              	100.00%		H2QE16              	100.00%
L0PHF8              	81.18%		
Bootstrap support for L0P7R6 as seed ortholog is 100%.
Bootstrap support for H2QE16 as seed ortholog is 100%.

Group of orthologs #37. Best score 916 bits
Score difference with first non-orthologous sequence - P.jiroveci:916 P.troglodytes:280

L0PAW9              	100.00%		H2RD80              	100.00%
L0PBZ0              	69.26%		A5A6K9              	99.44%
                    	       		H2QT34              	64.99%
Bootstrap support for L0PAW9 as seed ortholog is 100%.
Bootstrap support for H2RD80 as seed ortholog is 100%.

Group of orthologs #38. Best score 911 bits
Score difference with first non-orthologous sequence - P.jiroveci:380 P.troglodytes:397

L0PFC8              	100.00%		H2QPA3              	100.00%
Bootstrap support for L0PFC8 as seed ortholog is 100%.
Bootstrap support for H2QPA3 as seed ortholog is 100%.

Group of orthologs #39. Best score 902 bits
Score difference with first non-orthologous sequence - P.jiroveci:902 P.troglodytes:902

L0PG12              	100.00%		H2PZG8              	100.00%
Bootstrap support for L0PG12 as seed ortholog is 100%.
Bootstrap support for H2PZG8 as seed ortholog is 100%.

Group of orthologs #40. Best score 892 bits
Score difference with first non-orthologous sequence - P.jiroveci:892 P.troglodytes:714

L0PFN4              	100.00%		H2QLS4              	100.00%
Bootstrap support for L0PFN4 as seed ortholog is 100%.
Bootstrap support for H2QLS4 as seed ortholog is 100%.

Group of orthologs #41. Best score 876 bits
Score difference with first non-orthologous sequence - P.jiroveci:876 P.troglodytes:876

L0PCC4              	100.00%		G2HJQ1              	100.00%
Bootstrap support for L0PCC4 as seed ortholog is 100%.
Bootstrap support for G2HJQ1 as seed ortholog is 100%.

Group of orthologs #42. Best score 861 bits
Score difference with first non-orthologous sequence - P.jiroveci:560 P.troglodytes:514

L0PCW9              	100.00%		H2Q6V4              	100.00%
                    	       		H2QAV0              	58.74%
                    	       		H2R240              	51.44%
Bootstrap support for L0PCW9 as seed ortholog is 100%.
Bootstrap support for H2Q6V4 as seed ortholog is 100%.

Group of orthologs #43. Best score 856 bits
Score difference with first non-orthologous sequence - P.jiroveci:856 P.troglodytes:856

L0P9H4              	100.00%		H2R5Q6              	100.00%
Bootstrap support for L0P9H4 as seed ortholog is 100%.
Bootstrap support for H2R5Q6 as seed ortholog is 100%.

Group of orthologs #44. Best score 853 bits
Score difference with first non-orthologous sequence - P.jiroveci:853 P.troglodytes:853

L0PEU6              	100.00%		H2QW96              	100.00%
                    	       		H2QKJ3              	62.91%
Bootstrap support for L0PEU6 as seed ortholog is 100%.
Bootstrap support for H2QW96 as seed ortholog is 100%.

Group of orthologs #45. Best score 845 bits
Score difference with first non-orthologous sequence - P.jiroveci:845 P.troglodytes:749

L0PDF1              	100.00%		G2HF28              	100.00%
Bootstrap support for L0PDF1 as seed ortholog is 100%.
Bootstrap support for G2HF28 as seed ortholog is 100%.

Group of orthologs #46. Best score 845 bits
Score difference with first non-orthologous sequence - P.jiroveci:845 P.troglodytes:845

L0PAN4              	100.00%		H2QKT9              	100.00%
Bootstrap support for L0PAN4 as seed ortholog is 100%.
Bootstrap support for H2QKT9 as seed ortholog is 100%.

Group of orthologs #47. Best score 845 bits
Score difference with first non-orthologous sequence - P.jiroveci:693 P.troglodytes:602

L0PFS2              	100.00%		H2QRK8              	100.00%
Bootstrap support for L0PFS2 as seed ortholog is 100%.
Bootstrap support for H2QRK8 as seed ortholog is 100%.

Group of orthologs #48. Best score 843 bits
Score difference with first non-orthologous sequence - P.jiroveci:683 P.troglodytes:684

L0PBQ6              	100.00%		H2R6L5              	100.00%
Bootstrap support for L0PBQ6 as seed ortholog is 100%.
Bootstrap support for H2R6L5 as seed ortholog is 100%.

Group of orthologs #49. Best score 842 bits
Score difference with first non-orthologous sequence - P.jiroveci:842 P.troglodytes:251

L0PGR4              	100.00%		H2QUI7              	100.00%
L0PFQ2              	92.12%		H2Q1W4              	43.61%
Bootstrap support for L0PGR4 as seed ortholog is 100%.
Bootstrap support for H2QUI7 as seed ortholog is 99%.

Group of orthologs #50. Best score 840 bits
Score difference with first non-orthologous sequence - P.jiroveci:840 P.troglodytes:469

L0PGL4              	100.00%		H2R3P6              	100.00%
L0P7Q7              	24.22%		
Bootstrap support for L0PGL4 as seed ortholog is 100%.
Bootstrap support for H2R3P6 as seed ortholog is 100%.

Group of orthologs #51. Best score 835 bits
Score difference with first non-orthologous sequence - P.jiroveci:835 P.troglodytes:835

L0PBD7              	100.00%		H2QR21              	100.00%
                    	       		H2R0R8              	74.16%
Bootstrap support for L0PBD7 as seed ortholog is 100%.
Bootstrap support for H2QR21 as seed ortholog is 100%.

Group of orthologs #52. Best score 831 bits
Score difference with first non-orthologous sequence - P.jiroveci:636 P.troglodytes:544

L0PFV0              	100.00%		H2PYQ3              	100.00%
Bootstrap support for L0PFV0 as seed ortholog is 100%.
Bootstrap support for H2PYQ3 as seed ortholog is 100%.

Group of orthologs #53. Best score 830 bits
Score difference with first non-orthologous sequence - P.jiroveci:830 P.troglodytes:610

L0PD55              	100.00%		G2HHJ3              	100.00%
Bootstrap support for L0PD55 as seed ortholog is 100%.
Bootstrap support for G2HHJ3 as seed ortholog is 100%.

Group of orthologs #54. Best score 829 bits
Score difference with first non-orthologous sequence - P.jiroveci:829 P.troglodytes:829

L0PE96              	100.00%		H2Q944              	100.00%
Bootstrap support for L0PE96 as seed ortholog is 100%.
Bootstrap support for H2Q944 as seed ortholog is 100%.

Group of orthologs #55. Best score 824 bits
Score difference with first non-orthologous sequence - P.jiroveci:824 P.troglodytes:824

L0PBL6              	100.00%		H2R3G0              	100.00%
Bootstrap support for L0PBL6 as seed ortholog is 100%.
Bootstrap support for H2R3G0 as seed ortholog is 100%.

Group of orthologs #56. Best score 817 bits
Score difference with first non-orthologous sequence - P.jiroveci:817 P.troglodytes:817

L0PGL8              	100.00%		H2QXM0              	100.00%
Bootstrap support for L0PGL8 as seed ortholog is 100%.
Bootstrap support for H2QXM0 as seed ortholog is 100%.

Group of orthologs #57. Best score 814 bits
Score difference with first non-orthologous sequence - P.jiroveci:814 P.troglodytes:213

L0PDQ4              	100.00%		H2RA23              	100.00%
Bootstrap support for L0PDQ4 as seed ortholog is 100%.
Bootstrap support for H2RA23 as seed ortholog is 99%.

Group of orthologs #58. Best score 812 bits
Score difference with first non-orthologous sequence - P.jiroveci:812 P.troglodytes:464

L0PB83              	100.00%		H2RA84              	100.00%
Bootstrap support for L0PB83 as seed ortholog is 100%.
Bootstrap support for H2RA84 as seed ortholog is 100%.

Group of orthologs #59. Best score 811 bits
Score difference with first non-orthologous sequence - P.jiroveci:811 P.troglodytes:811

L0PC93              	100.00%		H2R1R2              	100.00%
Bootstrap support for L0PC93 as seed ortholog is 100%.
Bootstrap support for H2R1R2 as seed ortholog is 100%.

Group of orthologs #60. Best score 807 bits
Score difference with first non-orthologous sequence - P.jiroveci:807 P.troglodytes:807

L0PFF9              	100.00%		H2QVY7              	100.00%
Bootstrap support for L0PFF9 as seed ortholog is 100%.
Bootstrap support for H2QVY7 as seed ortholog is 100%.

Group of orthologs #61. Best score 805 bits
Score difference with first non-orthologous sequence - P.jiroveci:805 P.troglodytes:805

L0PC43              	100.00%		H2Q702              	100.00%
L0PCW3              	45.56%		
Bootstrap support for L0PC43 as seed ortholog is 100%.
Bootstrap support for H2Q702 as seed ortholog is 100%.

Group of orthologs #62. Best score 794 bits
Score difference with first non-orthologous sequence - P.jiroveci:794 P.troglodytes:794

L0PC54              	100.00%		H2Q3E3              	100.00%
Bootstrap support for L0PC54 as seed ortholog is 100%.
Bootstrap support for H2Q3E3 as seed ortholog is 100%.

Group of orthologs #63. Best score 794 bits
Score difference with first non-orthologous sequence - P.jiroveci:794 P.troglodytes:794

L0PH89              	100.00%		H2QN48              	100.00%
Bootstrap support for L0PH89 as seed ortholog is 100%.
Bootstrap support for H2QN48 as seed ortholog is 100%.

Group of orthologs #64. Best score 790 bits
Score difference with first non-orthologous sequence - P.jiroveci:790 P.troglodytes:790

L0P9W2              	100.00%		H2QB87              	100.00%
Bootstrap support for L0P9W2 as seed ortholog is 100%.
Bootstrap support for H2QB87 as seed ortholog is 100%.

Group of orthologs #65. Best score 781 bits
Score difference with first non-orthologous sequence - P.jiroveci:781 P.troglodytes:345

L0PBA5              	100.00%		Q5R1X2              	100.00%
                    	       		H2RCV2              	97.33%
Bootstrap support for L0PBA5 as seed ortholog is 100%.
Bootstrap support for Q5R1X2 as seed ortholog is 100%.

Group of orthologs #66. Best score 775 bits
Score difference with first non-orthologous sequence - P.jiroveci:775 P.troglodytes:775

L0P710              	100.00%		H2QNI6              	100.00%
Bootstrap support for L0P710 as seed ortholog is 100%.
Bootstrap support for H2QNI6 as seed ortholog is 100%.

Group of orthologs #67. Best score 775 bits
Score difference with first non-orthologous sequence - P.jiroveci:775 P.troglodytes:698

L0P7V1              	100.00%		H2R934              	100.00%
Bootstrap support for L0P7V1 as seed ortholog is 100%.
Bootstrap support for H2R934 as seed ortholog is 100%.

Group of orthologs #68. Best score 773 bits
Score difference with first non-orthologous sequence - P.jiroveci:773 P.troglodytes:773

L0PF68              	100.00%		H2Q4B9              	100.00%
Bootstrap support for L0PF68 as seed ortholog is 100%.
Bootstrap support for H2Q4B9 as seed ortholog is 100%.

Group of orthologs #69. Best score 769 bits
Score difference with first non-orthologous sequence - P.jiroveci:769 P.troglodytes:682

L0P9R9              	100.00%		H2Q377              	100.00%
Bootstrap support for L0P9R9 as seed ortholog is 100%.
Bootstrap support for H2Q377 as seed ortholog is 100%.

Group of orthologs #70. Best score 758 bits
Score difference with first non-orthologous sequence - P.jiroveci:758 P.troglodytes:285

L0PGU1              	100.00%		H2R1F1              	100.00%
                    	       		H2QEI7              	52.47%
                    	       		H2Q9G6              	35.13%
Bootstrap support for L0PGU1 as seed ortholog is 100%.
Bootstrap support for H2R1F1 as seed ortholog is 99%.

Group of orthologs #71. Best score 758 bits
Score difference with first non-orthologous sequence - P.jiroveci:397 P.troglodytes:758

L0P9U5              	100.00%		H2QQQ4              	100.00%
                    	       		H2QA60              	44.72%
Bootstrap support for L0P9U5 as seed ortholog is 100%.
Bootstrap support for H2QQQ4 as seed ortholog is 100%.

Group of orthologs #72. Best score 757 bits
Score difference with first non-orthologous sequence - P.jiroveci:634 P.troglodytes:9

L0PAC9              	100.00%		H2QPF0              	100.00%
                    	       		H2QRY1              	29.75%
                    	       		H2R8I6              	27.80%
Bootstrap support for L0PAC9 as seed ortholog is 100%.
Bootstrap support for H2QPF0 as seed ortholog is 86%.

Group of orthologs #73. Best score 756 bits
Score difference with first non-orthologous sequence - P.jiroveci:294 P.troglodytes:756

L0P833              	100.00%		A5A6H5              	100.00%
Bootstrap support for L0P833 as seed ortholog is 100%.
Bootstrap support for A5A6H5 as seed ortholog is 100%.

Group of orthologs #74. Best score 754 bits
Score difference with first non-orthologous sequence - P.jiroveci:754 P.troglodytes:754

L0PA62              	100.00%		H2QNA7              	100.00%
Bootstrap support for L0PA62 as seed ortholog is 100%.
Bootstrap support for H2QNA7 as seed ortholog is 100%.

Group of orthologs #75. Best score 748 bits
Score difference with first non-orthologous sequence - P.jiroveci:748 P.troglodytes:114

L0PBR4              	100.00%		G2HHT2              	100.00%
                    	       		Q7JJU6              	88.82%
                    	       		H2QS82              	88.20%
                    	       		H2QF52              	78.26%
                    	       		H2QBS3              	65.22%
                    	       		H2QS81              	61.49%
                    	       		Q8WP14              	53.42%
                    	       		H2QEA0              	53.42%
                    	       		H2R7W0              	51.55%
                    	       		H2Q189              	24.22%
Bootstrap support for L0PBR4 as seed ortholog is 100%.
Bootstrap support for G2HHT2 as seed ortholog is 99%.

Group of orthologs #76. Best score 743 bits
Score difference with first non-orthologous sequence - P.jiroveci:743 P.troglodytes:743

L0PFJ0              	100.00%		H2QM84              	100.00%
                    	       		G2HEN1              	13.06%
Bootstrap support for L0PFJ0 as seed ortholog is 100%.
Bootstrap support for H2QM84 as seed ortholog is 100%.

Group of orthologs #77. Best score 743 bits
Score difference with first non-orthologous sequence - P.jiroveci:743 P.troglodytes:743

L0P7K0              	100.00%		Q0MQG2              	100.00%
Bootstrap support for L0P7K0 as seed ortholog is 100%.
Bootstrap support for Q0MQG2 as seed ortholog is 100%.

Group of orthologs #78. Best score 740 bits
Score difference with first non-orthologous sequence - P.jiroveci:740 P.troglodytes:242

L0PB85              	100.00%		H2QA45              	100.00%
                    	       		H2QR99              	41.24%
Bootstrap support for L0PB85 as seed ortholog is 100%.
Bootstrap support for H2QA45 as seed ortholog is 99%.

Group of orthologs #79. Best score 735 bits
Score difference with first non-orthologous sequence - P.jiroveci:735 P.troglodytes:290

L0PC37              	100.00%		H2RA29              	100.00%
Bootstrap support for L0PC37 as seed ortholog is 100%.
Bootstrap support for H2RA29 as seed ortholog is 100%.

Group of orthologs #80. Best score 730 bits
Score difference with first non-orthologous sequence - P.jiroveci:730 P.troglodytes:730

L0PAS8              	100.00%		H2R176              	100.00%
                    	       		H2QS64              	46.48%
Bootstrap support for L0PAS8 as seed ortholog is 100%.
Bootstrap support for H2R176 as seed ortholog is 100%.

Group of orthologs #81. Best score 728 bits
Score difference with first non-orthologous sequence - P.jiroveci:657 P.troglodytes:584

L0PGA5              	100.00%		H2QQM7              	100.00%
Bootstrap support for L0PGA5 as seed ortholog is 100%.
Bootstrap support for H2QQM7 as seed ortholog is 100%.

Group of orthologs #82. Best score 727 bits
Score difference with first non-orthologous sequence - P.jiroveci:727 P.troglodytes:727

L0PE57              	100.00%		H2R3B3              	100.00%
Bootstrap support for L0PE57 as seed ortholog is 100%.
Bootstrap support for H2R3B3 as seed ortholog is 100%.

Group of orthologs #83. Best score 726 bits
Score difference with first non-orthologous sequence - P.jiroveci:726 P.troglodytes:726

L0PAQ3              	100.00%		H2Q8A4              	100.00%
                    	       		H2Q405              	65.35%
Bootstrap support for L0PAQ3 as seed ortholog is 100%.
Bootstrap support for H2Q8A4 as seed ortholog is 100%.

Group of orthologs #84. Best score 725 bits
Score difference with first non-orthologous sequence - P.jiroveci:651 P.troglodytes:725

L0PA93              	100.00%		H2R1S7              	100.00%
Bootstrap support for L0PA93 as seed ortholog is 100%.
Bootstrap support for H2R1S7 as seed ortholog is 100%.

Group of orthologs #85. Best score 723 bits
Score difference with first non-orthologous sequence - P.jiroveci:723 P.troglodytes:723

L0P773              	100.00%		H2QNV3              	100.00%
Bootstrap support for L0P773 as seed ortholog is 100%.
Bootstrap support for H2QNV3 as seed ortholog is 100%.

Group of orthologs #86. Best score 723 bits
Score difference with first non-orthologous sequence - P.jiroveci:723 P.troglodytes:463

L0PBV5              	100.00%		H2QT66              	100.00%
Bootstrap support for L0PBV5 as seed ortholog is 100%.
Bootstrap support for H2QT66 as seed ortholog is 100%.

Group of orthologs #87. Best score 716 bits
Score difference with first non-orthologous sequence - P.jiroveci:716 P.troglodytes:716

L0PDK6              	100.00%		H2Q7Y1              	100.00%
Bootstrap support for L0PDK6 as seed ortholog is 100%.
Bootstrap support for H2Q7Y1 as seed ortholog is 100%.

Group of orthologs #88. Best score 715 bits
Score difference with first non-orthologous sequence - P.jiroveci:715 P.troglodytes:715

L0PBW3              	100.00%		H2R1Z4              	100.00%
Bootstrap support for L0PBW3 as seed ortholog is 100%.
Bootstrap support for H2R1Z4 as seed ortholog is 100%.

Group of orthologs #89. Best score 715 bits
Score difference with first non-orthologous sequence - P.jiroveci:715 P.troglodytes:715

L0PBP8              	100.00%		H2R7Y8              	100.00%
Bootstrap support for L0PBP8 as seed ortholog is 100%.
Bootstrap support for H2R7Y8 as seed ortholog is 100%.

Group of orthologs #90. Best score 700 bits
Score difference with first non-orthologous sequence - P.jiroveci:700 P.troglodytes:579

L0P945              	100.00%		G2HIL6              	100.00%
Bootstrap support for L0P945 as seed ortholog is 100%.
Bootstrap support for G2HIL6 as seed ortholog is 100%.

Group of orthologs #91. Best score 699 bits
Score difference with first non-orthologous sequence - P.jiroveci:699 P.troglodytes:699

L0PBY5              	100.00%		H2Q7Q4              	100.00%
                    	       		H2QIP7              	43.11%
Bootstrap support for L0PBY5 as seed ortholog is 100%.
Bootstrap support for H2Q7Q4 as seed ortholog is 100%.

Group of orthologs #92. Best score 698 bits
Score difference with first non-orthologous sequence - P.jiroveci:698 P.troglodytes:364

L0PEL5              	100.00%		H2QFC8              	100.00%
L0PGC2              	51.92%		
Bootstrap support for L0PEL5 as seed ortholog is 100%.
Bootstrap support for H2QFC8 as seed ortholog is 100%.

Group of orthologs #93. Best score 695 bits
Score difference with first non-orthologous sequence - P.jiroveci:695 P.troglodytes:314

L0P7L0              	100.00%		H2QRI3              	100.00%
L0PCI7              	40.08%		
Bootstrap support for L0P7L0 as seed ortholog is 100%.
Bootstrap support for H2QRI3 as seed ortholog is 100%.

Group of orthologs #94. Best score 695 bits
Score difference with first non-orthologous sequence - P.jiroveci:695 P.troglodytes:21

L0PCK0              	100.00%		H2QPJ4              	100.00%
L0P7U1              	99.24%		
Bootstrap support for L0PCK0 as seed ortholog is 100%.
Bootstrap support for H2QPJ4 as seed ortholog is 64%.
Alternative seed ortholog is H2QMM5 (21 bits away from this cluster)

Group of orthologs #95. Best score 695 bits
Score difference with first non-orthologous sequence - P.jiroveci:695 P.troglodytes:695

L0P8L6              	100.00%		H2QA19              	100.00%
Bootstrap support for L0P8L6 as seed ortholog is 100%.
Bootstrap support for H2QA19 as seed ortholog is 100%.

Group of orthologs #96. Best score 688 bits
Score difference with first non-orthologous sequence - P.jiroveci:688 P.troglodytes:324

L0PEK9              	100.00%		H2R2P6              	100.00%
Bootstrap support for L0PEK9 as seed ortholog is 100%.
Bootstrap support for H2R2P6 as seed ortholog is 100%.

Group of orthologs #97. Best score 687 bits
Score difference with first non-orthologous sequence - P.jiroveci:532 P.troglodytes:326

L0PA91              	100.00%		Q5R1X3              	100.00%
                    	       		H2Q943              	47.95%
                    	       		H2Q1A9              	42.47%
                    	       		H2QE24              	36.99%
                    	       		H2QW46              	13.70%
Bootstrap support for L0PA91 as seed ortholog is 100%.
Bootstrap support for Q5R1X3 as seed ortholog is 100%.

Group of orthologs #98. Best score 686 bits
Score difference with first non-orthologous sequence - P.jiroveci:686 P.troglodytes:411

L0PBW7              	100.00%		H2R6R5              	100.00%
Bootstrap support for L0PBW7 as seed ortholog is 100%.
Bootstrap support for H2R6R5 as seed ortholog is 100%.

Group of orthologs #99. Best score 683 bits
Score difference with first non-orthologous sequence - P.jiroveci:683 P.troglodytes:683

L0PDF3              	100.00%		H2Q5L0              	100.00%
                    	       		H2R1A4              	39.87%
Bootstrap support for L0PDF3 as seed ortholog is 100%.
Bootstrap support for H2Q5L0 as seed ortholog is 100%.

Group of orthologs #100. Best score 683 bits
Score difference with first non-orthologous sequence - P.jiroveci:683 P.troglodytes:540

L0PG45              	100.00%		H2QI45              	100.00%
Bootstrap support for L0PG45 as seed ortholog is 100%.
Bootstrap support for H2QI45 as seed ortholog is 100%.

Group of orthologs #101. Best score 682 bits
Score difference with first non-orthologous sequence - P.jiroveci:554 P.troglodytes:577

L0PIF0              	100.00%		H2QP02              	100.00%
                    	       		H2QNZ7              	17.61%
                    	       		H2QNZ6              	10.77%
                    	       		H2PY55              	8.13%
Bootstrap support for L0PIF0 as seed ortholog is 100%.
Bootstrap support for H2QP02 as seed ortholog is 100%.

Group of orthologs #102. Best score 681 bits
Score difference with first non-orthologous sequence - P.jiroveci:179 P.troglodytes:193

L0P9U6              	100.00%		H2R8Y8              	100.00%
Bootstrap support for L0P9U6 as seed ortholog is 99%.
Bootstrap support for H2R8Y8 as seed ortholog is 99%.

Group of orthologs #103. Best score 680 bits
Score difference with first non-orthologous sequence - P.jiroveci:566 P.troglodytes:586

L0PA41              	100.00%		H2PZS4              	100.00%
Bootstrap support for L0PA41 as seed ortholog is 100%.
Bootstrap support for H2PZS4 as seed ortholog is 100%.

Group of orthologs #104. Best score 679 bits
Score difference with first non-orthologous sequence - P.jiroveci:591 P.troglodytes:550

L0P976              	100.00%		G2HJ25              	100.00%
Bootstrap support for L0P976 as seed ortholog is 100%.
Bootstrap support for G2HJ25 as seed ortholog is 100%.

Group of orthologs #105. Best score 675 bits
Score difference with first non-orthologous sequence - P.jiroveci:675 P.troglodytes:416

L0PG32              	100.00%		H2QLK2              	100.00%
Bootstrap support for L0PG32 as seed ortholog is 100%.
Bootstrap support for H2QLK2 as seed ortholog is 100%.

Group of orthologs #106. Best score 673 bits
Score difference with first non-orthologous sequence - P.jiroveci:673 P.troglodytes:673

L0PC65              	100.00%		H2PYS9              	100.00%
                    	       		H2R3J0              	45.40%
Bootstrap support for L0PC65 as seed ortholog is 100%.
Bootstrap support for H2PYS9 as seed ortholog is 100%.

Group of orthologs #107. Best score 672 bits
Score difference with first non-orthologous sequence - P.jiroveci:672 P.troglodytes:397

L0PG19              	100.00%		H2Q3W1              	100.00%
                    	       		H2Q992              	20.66%
Bootstrap support for L0PG19 as seed ortholog is 100%.
Bootstrap support for H2Q3W1 as seed ortholog is 100%.

Group of orthologs #108. Best score 672 bits
Score difference with first non-orthologous sequence - P.jiroveci:578 P.troglodytes:401

L0PCT0              	100.00%		H2Q5T8              	100.00%
Bootstrap support for L0PCT0 as seed ortholog is 100%.
Bootstrap support for H2Q5T8 as seed ortholog is 100%.

Group of orthologs #109. Best score 671 bits
Score difference with first non-orthologous sequence - P.jiroveci:671 P.troglodytes:671

L0PC79              	100.00%		H2R9Q4              	100.00%
                    	       		H2QVG4              	36.93%
                    	       		H2Q764              	20.89%
                    	       		H2Q498              	8.16%
Bootstrap support for L0PC79 as seed ortholog is 100%.
Bootstrap support for H2R9Q4 as seed ortholog is 100%.

Group of orthologs #110. Best score 671 bits
Score difference with first non-orthologous sequence - P.jiroveci:671 P.troglodytes:671

L0P971              	100.00%		Q0MQI6              	100.00%
Bootstrap support for L0P971 as seed ortholog is 100%.
Bootstrap support for Q0MQI6 as seed ortholog is 100%.

Group of orthologs #111. Best score 663 bits
Score difference with first non-orthologous sequence - P.jiroveci:663 P.troglodytes:528

L0PER6              	100.00%		G2HH56              	100.00%
Bootstrap support for L0PER6 as seed ortholog is 100%.
Bootstrap support for G2HH56 as seed ortholog is 100%.

Group of orthologs #112. Best score 659 bits
Score difference with first non-orthologous sequence - P.jiroveci:659 P.troglodytes:206

L0PBN5              	100.00%		G2HEC7              	100.00%
Bootstrap support for L0PBN5 as seed ortholog is 100%.
Bootstrap support for G2HEC7 as seed ortholog is 99%.

Group of orthologs #113. Best score 659 bits
Score difference with first non-orthologous sequence - P.jiroveci:534 P.troglodytes:455

L0PE26              	100.00%		H2PYY5              	100.00%
Bootstrap support for L0PE26 as seed ortholog is 100%.
Bootstrap support for H2PYY5 as seed ortholog is 100%.

Group of orthologs #114. Best score 659 bits
Score difference with first non-orthologous sequence - P.jiroveci:365 P.troglodytes:659

L0PFG7              	100.00%		H2QBJ3              	100.00%
Bootstrap support for L0PFG7 as seed ortholog is 100%.
Bootstrap support for H2QBJ3 as seed ortholog is 100%.

Group of orthologs #115. Best score 657 bits
Score difference with first non-orthologous sequence - P.jiroveci:657 P.troglodytes:657

L0PDI6              	100.00%		H2QDA3              	100.00%
Bootstrap support for L0PDI6 as seed ortholog is 100%.
Bootstrap support for H2QDA3 as seed ortholog is 100%.

Group of orthologs #116. Best score 654 bits
Score difference with first non-orthologous sequence - P.jiroveci:654 P.troglodytes:654

L0PDG3              	100.00%		H2Q7Q8              	100.00%
                    	       		H2R6T7              	74.28%
Bootstrap support for L0PDG3 as seed ortholog is 100%.
Bootstrap support for H2Q7Q8 as seed ortholog is 100%.

Group of orthologs #117. Best score 653 bits
Score difference with first non-orthologous sequence - P.jiroveci:653 P.troglodytes:653

L0P8Y6              	100.00%		H2Q1W1              	100.00%
Bootstrap support for L0P8Y6 as seed ortholog is 100%.
Bootstrap support for H2Q1W1 as seed ortholog is 100%.

Group of orthologs #118. Best score 651 bits
Score difference with first non-orthologous sequence - P.jiroveci:651 P.troglodytes:599

L0P8M6              	100.00%		H2QNC0              	100.00%
Bootstrap support for L0P8M6 as seed ortholog is 100%.
Bootstrap support for H2QNC0 as seed ortholog is 100%.

Group of orthologs #119. Best score 650 bits
Score difference with first non-orthologous sequence - P.jiroveci:650 P.troglodytes:650

L0PDK3              	100.00%		H2QGX7              	100.00%
Bootstrap support for L0PDK3 as seed ortholog is 100%.
Bootstrap support for H2QGX7 as seed ortholog is 100%.

Group of orthologs #120. Best score 643 bits
Score difference with first non-orthologous sequence - P.jiroveci:643 P.troglodytes:558

L0PGS4              	100.00%		H2QUL9              	100.00%
                    	       		G2HJ75              	66.49%
Bootstrap support for L0PGS4 as seed ortholog is 100%.
Bootstrap support for H2QUL9 as seed ortholog is 100%.

Group of orthologs #121. Best score 639 bits
Score difference with first non-orthologous sequence - P.jiroveci:639 P.troglodytes:639

L0PEQ8              	100.00%		H2RBN9              	100.00%
                    	       		H2R059              	50.00%
                    	       		H2Q1J5              	49.78%
Bootstrap support for L0PEQ8 as seed ortholog is 100%.
Bootstrap support for H2RBN9 as seed ortholog is 100%.

Group of orthologs #122. Best score 638 bits
Score difference with first non-orthologous sequence - P.jiroveci:638 P.troglodytes:355

L0PD31              	100.00%		H2QW49              	100.00%
Bootstrap support for L0PD31 as seed ortholog is 100%.
Bootstrap support for H2QW49 as seed ortholog is 100%.

Group of orthologs #123. Best score 629 bits
Score difference with first non-orthologous sequence - P.jiroveci:629 P.troglodytes:188

L0PDJ1              	100.00%		H2QK78              	100.00%
Bootstrap support for L0PDJ1 as seed ortholog is 100%.
Bootstrap support for H2QK78 as seed ortholog is 100%.

Group of orthologs #124. Best score 629 bits
Score difference with first non-orthologous sequence - P.jiroveci:629 P.troglodytes:483

L0PEP7              	100.00%		H2R8P2              	100.00%
Bootstrap support for L0PEP7 as seed ortholog is 100%.
Bootstrap support for H2R8P2 as seed ortholog is 100%.

Group of orthologs #125. Best score 628 bits
Score difference with first non-orthologous sequence - P.jiroveci:628 P.troglodytes:628

L0PBJ1              	100.00%		H2QJ27              	100.00%
Bootstrap support for L0PBJ1 as seed ortholog is 100%.
Bootstrap support for H2QJ27 as seed ortholog is 100%.

Group of orthologs #126. Best score 627 bits
Score difference with first non-orthologous sequence - P.jiroveci:314 P.troglodytes:324

L0P8L4              	100.00%		H2QND5              	100.00%
                    	       		H2QBM4              	43.79%
Bootstrap support for L0P8L4 as seed ortholog is 100%.
Bootstrap support for H2QND5 as seed ortholog is 100%.

Group of orthologs #127. Best score 621 bits
Score difference with first non-orthologous sequence - P.jiroveci:621 P.troglodytes:533

L0PD32              	100.00%		H2QKJ4              	100.00%
L0PD26              	93.66%		
Bootstrap support for L0PD32 as seed ortholog is 100%.
Bootstrap support for H2QKJ4 as seed ortholog is 100%.

Group of orthologs #128. Best score 621 bits
Score difference with first non-orthologous sequence - P.jiroveci:621 P.troglodytes:621

L0P7V2              	100.00%		H2R1N5              	100.00%
Bootstrap support for L0P7V2 as seed ortholog is 100%.
Bootstrap support for H2R1N5 as seed ortholog is 100%.

Group of orthologs #129. Best score 619 bits
Score difference with first non-orthologous sequence - P.jiroveci:619 P.troglodytes:314

L0P8C8              	100.00%		H2QF02              	100.00%
Bootstrap support for L0P8C8 as seed ortholog is 100%.
Bootstrap support for H2QF02 as seed ortholog is 100%.

Group of orthologs #130. Best score 619 bits
Score difference with first non-orthologous sequence - P.jiroveci:619 P.troglodytes:619

L0P9S1              	100.00%		H2R361              	100.00%
Bootstrap support for L0P9S1 as seed ortholog is 100%.
Bootstrap support for H2R361 as seed ortholog is 100%.

Group of orthologs #131. Best score 616 bits
Score difference with first non-orthologous sequence - P.jiroveci:616 P.troglodytes:616

L0P8G2              	100.00%		H2Q2W5              	100.00%
                    	       		H2R0B2              	59.52%
Bootstrap support for L0P8G2 as seed ortholog is 100%.
Bootstrap support for H2Q2W5 as seed ortholog is 100%.

Group of orthologs #132. Best score 616 bits
Score difference with first non-orthologous sequence - P.jiroveci:497 P.troglodytes:257

L0P8E7              	100.00%		H2QIL6              	100.00%
Bootstrap support for L0P8E7 as seed ortholog is 100%.
Bootstrap support for H2QIL6 as seed ortholog is 100%.

Group of orthologs #133. Best score 614 bits
Score difference with first non-orthologous sequence - P.jiroveci:614 P.troglodytes:361

L0PG07              	100.00%		H2QV16              	100.00%
Bootstrap support for L0PG07 as seed ortholog is 100%.
Bootstrap support for H2QV16 as seed ortholog is 100%.

Group of orthologs #134. Best score 613 bits
Score difference with first non-orthologous sequence - P.jiroveci:613 P.troglodytes:613

L0PAX4              	100.00%		H2RAD7              	100.00%
Bootstrap support for L0PAX4 as seed ortholog is 100%.
Bootstrap support for H2RAD7 as seed ortholog is 100%.

Group of orthologs #135. Best score 612 bits
Score difference with first non-orthologous sequence - P.jiroveci:612 P.troglodytes:612

L0PF80              	100.00%		H2QC76              	100.00%
Bootstrap support for L0PF80 as seed ortholog is 100%.
Bootstrap support for H2QC76 as seed ortholog is 100%.

Group of orthologs #136. Best score 612 bits
Score difference with first non-orthologous sequence - P.jiroveci:612 P.troglodytes:612

L0PBN0              	100.00%		H2R0X5              	100.00%
Bootstrap support for L0PBN0 as seed ortholog is 100%.
Bootstrap support for H2R0X5 as seed ortholog is 100%.

Group of orthologs #137. Best score 609 bits
Score difference with first non-orthologous sequence - P.jiroveci:609 P.troglodytes:361

L0PAR0              	100.00%		H2QD29              	100.00%
                    	       		H2QD30              	94.37%
Bootstrap support for L0PAR0 as seed ortholog is 100%.
Bootstrap support for H2QD29 as seed ortholog is 100%.

Group of orthologs #138. Best score 607 bits
Score difference with first non-orthologous sequence - P.jiroveci:397 P.troglodytes:325

L0PFW1              	100.00%		H2R244              	100.00%
                    	       		H2R0E4              	60.77%
                    	       		H2R410              	42.65%
                    	       		H2QZ95              	23.43%
Bootstrap support for L0PFW1 as seed ortholog is 100%.
Bootstrap support for H2R244 as seed ortholog is 100%.

Group of orthologs #139. Best score 606 bits
Score difference with first non-orthologous sequence - P.jiroveci:606 P.troglodytes:406

L0PGT9              	100.00%		H2QBH5              	100.00%
                    	       		H2R2T6              	32.04%
Bootstrap support for L0PGT9 as seed ortholog is 100%.
Bootstrap support for H2QBH5 as seed ortholog is 100%.

Group of orthologs #140. Best score 605 bits
Score difference with first non-orthologous sequence - P.jiroveci:605 P.troglodytes:605

L0PB96              	100.00%		Q0MQG5              	100.00%
Bootstrap support for L0PB96 as seed ortholog is 100%.
Bootstrap support for Q0MQG5 as seed ortholog is 100%.

Group of orthologs #141. Best score 600 bits
Score difference with first non-orthologous sequence - P.jiroveci:600 P.troglodytes:600

L0P7N3              	100.00%		H2R178              	100.00%
                    	       		H2QVB7              	66.10%
Bootstrap support for L0P7N3 as seed ortholog is 100%.
Bootstrap support for H2R178 as seed ortholog is 100%.

Group of orthologs #142. Best score 598 bits
Score difference with first non-orthologous sequence - P.jiroveci:598 P.troglodytes:598

L0PFI9              	100.00%		H2Q2N4              	100.00%
Bootstrap support for L0PFI9 as seed ortholog is 100%.
Bootstrap support for H2Q2N4 as seed ortholog is 100%.

Group of orthologs #143. Best score 597 bits
Score difference with first non-orthologous sequence - P.jiroveci:479 P.troglodytes:367

L0P853              	100.00%		H2R2Z3              	100.00%
L0P8M8              	55.04%		
Bootstrap support for L0P853 as seed ortholog is 100%.
Bootstrap support for H2R2Z3 as seed ortholog is 100%.

Group of orthologs #144. Best score 595 bits
Score difference with first non-orthologous sequence - P.jiroveci:595 P.troglodytes:595

L0P7T0              	100.00%		H2QKC9              	100.00%
                    	       		A9Q1D5              	26.96%
Bootstrap support for L0P7T0 as seed ortholog is 100%.
Bootstrap support for H2QKC9 as seed ortholog is 100%.

Group of orthologs #145. Best score 591 bits
Score difference with first non-orthologous sequence - P.jiroveci:591 P.troglodytes:591

L0PCT1              	100.00%		H2QZ30              	100.00%
Bootstrap support for L0PCT1 as seed ortholog is 100%.
Bootstrap support for H2QZ30 as seed ortholog is 100%.

Group of orthologs #146. Best score 589 bits
Score difference with first non-orthologous sequence - P.jiroveci:209 P.troglodytes:589

L0PBH4              	100.00%		H2QHP3              	100.00%
                    	       		H2Q6V7              	8.42%
                    	       		H2Q6V8              	5.26%
Bootstrap support for L0PBH4 as seed ortholog is 100%.
Bootstrap support for H2QHP3 as seed ortholog is 100%.

Group of orthologs #147. Best score 589 bits
Score difference with first non-orthologous sequence - P.jiroveci:589 P.troglodytes:589

L0P917              	100.00%		H2QT77              	100.00%
L0PF20              	85.66%		
Bootstrap support for L0P917 as seed ortholog is 100%.
Bootstrap support for H2QT77 as seed ortholog is 100%.

Group of orthologs #148. Best score 589 bits
Score difference with first non-orthologous sequence - P.jiroveci:475 P.troglodytes:175

L0PDY0              	100.00%		Q6GVM6              	100.00%
Bootstrap support for L0PDY0 as seed ortholog is 100%.
Bootstrap support for Q6GVM6 as seed ortholog is 99%.

Group of orthologs #149. Best score 584 bits
Score difference with first non-orthologous sequence - P.jiroveci:424 P.troglodytes:215

L0P850              	100.00%		H2Q2A9              	100.00%
Bootstrap support for L0P850 as seed ortholog is 100%.
Bootstrap support for H2Q2A9 as seed ortholog is 99%.

Group of orthologs #150. Best score 584 bits
Score difference with first non-orthologous sequence - P.jiroveci:584 P.troglodytes:584

L0P958              	100.00%		H2QZW2              	100.00%
Bootstrap support for L0P958 as seed ortholog is 100%.
Bootstrap support for H2QZW2 as seed ortholog is 100%.

Group of orthologs #151. Best score 582 bits
Score difference with first non-orthologous sequence - P.jiroveci:506 P.troglodytes:476

L0PCS2              	100.00%		H2QFV7              	100.00%
Bootstrap support for L0PCS2 as seed ortholog is 100%.
Bootstrap support for H2QFV7 as seed ortholog is 100%.

Group of orthologs #152. Best score 579 bits
Score difference with first non-orthologous sequence - P.jiroveci:579 P.troglodytes:579

L0PB97              	100.00%		H2QH17              	100.00%
                    	       		H2Q4R4              	73.51%
Bootstrap support for L0PB97 as seed ortholog is 100%.
Bootstrap support for H2QH17 as seed ortholog is 100%.

Group of orthologs #153. Best score 577 bits
Score difference with first non-orthologous sequence - P.jiroveci:389 P.troglodytes:577

L0PCD8              	100.00%		H2Q157              	100.00%
Bootstrap support for L0PCD8 as seed ortholog is 100%.
Bootstrap support for H2Q157 as seed ortholog is 100%.

Group of orthologs #154. Best score 576 bits
Score difference with first non-orthologous sequence - P.jiroveci:576 P.troglodytes:576

L0PDU2              	100.00%		H2QQZ6              	100.00%
Bootstrap support for L0PDU2 as seed ortholog is 100%.
Bootstrap support for H2QQZ6 as seed ortholog is 100%.

Group of orthologs #155. Best score 575 bits
Score difference with first non-orthologous sequence - P.jiroveci:575 P.troglodytes:112

L0PBW1              	100.00%		H2PYJ7              	100.00%
                    	       		H2QTM3              	68.72%
                    	       		H2QN78              	60.08%
Bootstrap support for L0PBW1 as seed ortholog is 100%.
Bootstrap support for H2PYJ7 as seed ortholog is 98%.

Group of orthologs #156. Best score 575 bits
Score difference with first non-orthologous sequence - P.jiroveci:575 P.troglodytes:575

L0PES7              	100.00%		H2Q1E9              	100.00%
Bootstrap support for L0PES7 as seed ortholog is 100%.
Bootstrap support for H2Q1E9 as seed ortholog is 100%.

Group of orthologs #157. Best score 575 bits
Score difference with first non-orthologous sequence - P.jiroveci:575 P.troglodytes:575

L0PA45              	100.00%		H2R5E9              	100.00%
Bootstrap support for L0PA45 as seed ortholog is 100%.
Bootstrap support for H2R5E9 as seed ortholog is 100%.

Group of orthologs #158. Best score 568 bits
Score difference with first non-orthologous sequence - P.jiroveci:568 P.troglodytes:568

L0PBM4              	100.00%		H2R491              	100.00%
                    	       		H2Q9U2              	29.07%
Bootstrap support for L0PBM4 as seed ortholog is 100%.
Bootstrap support for H2R491 as seed ortholog is 100%.

Group of orthologs #159. Best score 567 bits
Score difference with first non-orthologous sequence - P.jiroveci:567 P.troglodytes:567

L0PFT7              	100.00%		H2QLR3              	100.00%
Bootstrap support for L0PFT7 as seed ortholog is 100%.
Bootstrap support for H2QLR3 as seed ortholog is 100%.

Group of orthologs #160. Best score 566 bits
Score difference with first non-orthologous sequence - P.jiroveci:566 P.troglodytes:566

L0PG37              	100.00%		H2QT14              	100.00%
                    	       		H2Q8X8              	40.40%
                    	       		H2Q8F8              	9.44%
                    	       		H2Q411              	7.12%
                    	       		H2Q137              	5.42%
Bootstrap support for L0PG37 as seed ortholog is 100%.
Bootstrap support for H2QT14 as seed ortholog is 100%.

Group of orthologs #161. Best score 565 bits
Score difference with first non-orthologous sequence - P.jiroveci:434 P.troglodytes:316

L0PC64              	100.00%		H2QE09              	100.00%
Bootstrap support for L0PC64 as seed ortholog is 100%.
Bootstrap support for H2QE09 as seed ortholog is 100%.

Group of orthologs #162. Best score 565 bits
Score difference with first non-orthologous sequence - P.jiroveci:565 P.troglodytes:565

L0PCA7              	100.00%		H2QRB0              	100.00%
Bootstrap support for L0PCA7 as seed ortholog is 100%.
Bootstrap support for H2QRB0 as seed ortholog is 100%.

Group of orthologs #163. Best score 564 bits
Score difference with first non-orthologous sequence - P.jiroveci:564 P.troglodytes:564

L0PC44              	100.00%		H2R5M8              	100.00%
Bootstrap support for L0PC44 as seed ortholog is 100%.
Bootstrap support for H2R5M8 as seed ortholog is 100%.

Group of orthologs #164. Best score 563 bits
Score difference with first non-orthologous sequence - P.jiroveci:563 P.troglodytes:563

L0P8W6              	100.00%		H2QZB5              	100.00%
Bootstrap support for L0P8W6 as seed ortholog is 100%.
Bootstrap support for H2QZB5 as seed ortholog is 100%.

Group of orthologs #165. Best score 561 bits
Score difference with first non-orthologous sequence - P.jiroveci:27 P.troglodytes:79

L0PGY9              	100.00%		H2R700              	100.00%
                    	       		H2RGL2              	43.90%
Bootstrap support for L0PGY9 as seed ortholog is 73%.
Alternative seed ortholog is L0PCK5 (27 bits away from this cluster)
Bootstrap support for H2R700 as seed ortholog is 97%.

Group of orthologs #166. Best score 557 bits
Score difference with first non-orthologous sequence - P.jiroveci:557 P.troglodytes:365

L0PA75              	100.00%		H2QFP2              	100.00%
                    	       		H2QFC2              	42.55%
Bootstrap support for L0PA75 as seed ortholog is 100%.
Bootstrap support for H2QFP2 as seed ortholog is 100%.

Group of orthologs #167. Best score 553 bits
Score difference with first non-orthologous sequence - P.jiroveci:553 P.troglodytes:553

L0PG27              	100.00%		H2QYF2              	100.00%
Bootstrap support for L0PG27 as seed ortholog is 100%.
Bootstrap support for H2QYF2 as seed ortholog is 100%.

Group of orthologs #168. Best score 545 bits
Score difference with first non-orthologous sequence - P.jiroveci:192 P.troglodytes:389

L0P7D9              	100.00%		H2QRH7              	100.00%
Bootstrap support for L0P7D9 as seed ortholog is 100%.
Bootstrap support for H2QRH7 as seed ortholog is 100%.

Group of orthologs #169. Best score 544 bits
Score difference with first non-orthologous sequence - P.jiroveci:544 P.troglodytes:544

L0PBV4              	100.00%		H2QIJ4              	100.00%
Bootstrap support for L0PBV4 as seed ortholog is 100%.
Bootstrap support for H2QIJ4 as seed ortholog is 100%.

Group of orthologs #170. Best score 543 bits
Score difference with first non-orthologous sequence - P.jiroveci:543 P.troglodytes:543

L0PA85              	100.00%		H2QK18              	100.00%
Bootstrap support for L0PA85 as seed ortholog is 100%.
Bootstrap support for H2QK18 as seed ortholog is 100%.

Group of orthologs #171. Best score 543 bits
Score difference with first non-orthologous sequence - P.jiroveci:543 P.troglodytes:543

L0P9U3              	100.00%		H2QU35              	100.00%
Bootstrap support for L0P9U3 as seed ortholog is 100%.
Bootstrap support for H2QU35 as seed ortholog is 100%.

Group of orthologs #172. Best score 539 bits
Score difference with first non-orthologous sequence - P.jiroveci:539 P.troglodytes:539

L0PEZ0              	100.00%		H2QTJ4              	100.00%
Bootstrap support for L0PEZ0 as seed ortholog is 100%.
Bootstrap support for H2QTJ4 as seed ortholog is 100%.

Group of orthologs #173. Best score 535 bits
Score difference with first non-orthologous sequence - P.jiroveci:535 P.troglodytes:535

L0P6X8              	100.00%		H2QIR9              	100.00%
Bootstrap support for L0P6X8 as seed ortholog is 100%.
Bootstrap support for H2QIR9 as seed ortholog is 100%.

Group of orthologs #174. Best score 534 bits
Score difference with first non-orthologous sequence - P.jiroveci:534 P.troglodytes:534

L0PBR9              	100.00%		H2QI93              	100.00%
                    	       		H2Q259              	62.03%
Bootstrap support for L0PBR9 as seed ortholog is 100%.
Bootstrap support for H2QI93 as seed ortholog is 100%.

Group of orthologs #175. Best score 532 bits
Score difference with first non-orthologous sequence - P.jiroveci:532 P.troglodytes:532

L0PB12              	100.00%		G2HFH0              	100.00%
Bootstrap support for L0PB12 as seed ortholog is 100%.
Bootstrap support for G2HFH0 as seed ortholog is 100%.

Group of orthologs #176. Best score 532 bits
Score difference with first non-orthologous sequence - P.jiroveci:532 P.troglodytes:532

L0PEA0              	100.00%		H2Q1Z5              	100.00%
Bootstrap support for L0PEA0 as seed ortholog is 100%.
Bootstrap support for H2Q1Z5 as seed ortholog is 100%.

Group of orthologs #177. Best score 531 bits
Score difference with first non-orthologous sequence - P.jiroveci:531 P.troglodytes:339

L0P7Y5              	100.00%		H2QV83              	100.00%
Bootstrap support for L0P7Y5 as seed ortholog is 100%.
Bootstrap support for H2QV83 as seed ortholog is 100%.

Group of orthologs #178. Best score 531 bits
Score difference with first non-orthologous sequence - P.jiroveci:479 P.troglodytes:415

L0PBU6              	100.00%		H2QTJ6              	100.00%
Bootstrap support for L0PBU6 as seed ortholog is 100%.
Bootstrap support for H2QTJ6 as seed ortholog is 100%.

Group of orthologs #179. Best score 529 bits
Score difference with first non-orthologous sequence - P.jiroveci:529 P.troglodytes:529

L0P9D4              	100.00%		H2QAB5              	100.00%
Bootstrap support for L0P9D4 as seed ortholog is 100%.
Bootstrap support for H2QAB5 as seed ortholog is 100%.

Group of orthologs #180. Best score 527 bits
Score difference with first non-orthologous sequence - P.jiroveci:409 P.troglodytes:289

L0P7V6              	100.00%		G2HFF4              	100.00%
                    	       		A5A6N4              	73.76%
Bootstrap support for L0P7V6 as seed ortholog is 100%.
Bootstrap support for G2HFF4 as seed ortholog is 100%.

Group of orthologs #181. Best score 525 bits
Score difference with first non-orthologous sequence - P.jiroveci:525 P.troglodytes:300

L0P9I8              	100.00%		H2QLG0              	100.00%
                    	       		H2R1D0              	78.43%
Bootstrap support for L0P9I8 as seed ortholog is 100%.
Bootstrap support for H2QLG0 as seed ortholog is 100%.

Group of orthologs #182. Best score 524 bits
Score difference with first non-orthologous sequence - P.jiroveci:524 P.troglodytes:188

L0P802              	100.00%		H2QZS4              	100.00%
                    	       		H2R0X7              	45.54%
                    	       		H2QKE9              	34.44%
Bootstrap support for L0P802 as seed ortholog is 100%.
Bootstrap support for H2QZS4 as seed ortholog is 99%.

Group of orthologs #183. Best score 521 bits
Score difference with first non-orthologous sequence - P.jiroveci:521 P.troglodytes:521

L0PAN9              	100.00%		H2QR35              	100.00%
L0PID8              	82.91%		
Bootstrap support for L0PAN9 as seed ortholog is 100%.
Bootstrap support for H2QR35 as seed ortholog is 100%.

Group of orthologs #184. Best score 520 bits
Score difference with first non-orthologous sequence - P.jiroveci:520 P.troglodytes:296

L0PET9              	100.00%		G2HHT4              	100.00%
                    	       		H2R0L8              	80.33%
Bootstrap support for L0PET9 as seed ortholog is 100%.
Bootstrap support for G2HHT4 as seed ortholog is 100%.

Group of orthologs #185. Best score 519 bits
Score difference with first non-orthologous sequence - P.jiroveci:519 P.troglodytes:266

L0PF72              	100.00%		H2R2B8              	100.00%
                    	       		H2RC08              	67.77%
                    	       		H2R413              	58.44%
Bootstrap support for L0PF72 as seed ortholog is 100%.
Bootstrap support for H2R2B8 as seed ortholog is 100%.

Group of orthologs #186. Best score 519 bits
Score difference with first non-orthologous sequence - P.jiroveci:519 P.troglodytes:519

L0PCX1              	100.00%		H2QCE4              	100.00%
                    	       		H2Q6A8              	17.94%
Bootstrap support for L0PCX1 as seed ortholog is 100%.
Bootstrap support for H2QCE4 as seed ortholog is 100%.

Group of orthologs #187. Best score 519 bits
Score difference with first non-orthologous sequence - P.jiroveci:519 P.troglodytes:382

L0P6Y2              	100.00%		H2QK98              	100.00%
Bootstrap support for L0P6Y2 as seed ortholog is 100%.
Bootstrap support for H2QK98 as seed ortholog is 100%.

Group of orthologs #188. Best score 519 bits
Score difference with first non-orthologous sequence - P.jiroveci:399 P.troglodytes:348

L0PEP2              	100.00%		H2QWF8              	100.00%
Bootstrap support for L0PEP2 as seed ortholog is 100%.
Bootstrap support for H2QWF8 as seed ortholog is 100%.

Group of orthologs #189. Best score 518 bits
Score difference with first non-orthologous sequence - P.jiroveci:518 P.troglodytes:261

L0P718              	100.00%		H2QZE1              	100.00%
Bootstrap support for L0P718 as seed ortholog is 100%.
Bootstrap support for H2QZE1 as seed ortholog is 100%.

Group of orthologs #190. Best score 517 bits
Score difference with first non-orthologous sequence - P.jiroveci:517 P.troglodytes:353

L0PBI1              	100.00%		H2QRH2              	100.00%
                    	       		H2QQ54              	49.43%
                    	       		H2Q7D9              	49.17%
Bootstrap support for L0PBI1 as seed ortholog is 100%.
Bootstrap support for H2QRH2 as seed ortholog is 100%.

Group of orthologs #191. Best score 515 bits
Score difference with first non-orthologous sequence - P.jiroveci:515 P.troglodytes:515

L0PBG8              	100.00%		H2QPE2              	100.00%
Bootstrap support for L0PBG8 as seed ortholog is 100%.
Bootstrap support for H2QPE2 as seed ortholog is 100%.

Group of orthologs #192. Best score 512 bits
Score difference with first non-orthologous sequence - P.jiroveci:512 P.troglodytes:512

L0PAS3              	100.00%		H2QQ07              	100.00%
                    	       		H2R5C3              	35.80%
Bootstrap support for L0PAS3 as seed ortholog is 100%.
Bootstrap support for H2QQ07 as seed ortholog is 100%.

Group of orthologs #193. Best score 512 bits
Score difference with first non-orthologous sequence - P.jiroveci:512 P.troglodytes:264

L0PBP3              	100.00%		H2QZ27              	100.00%
                    	       		H2Q7U2              	64.10%
Bootstrap support for L0PBP3 as seed ortholog is 100%.
Bootstrap support for H2QZ27 as seed ortholog is 100%.

Group of orthologs #194. Best score 511 bits
Score difference with first non-orthologous sequence - P.jiroveci:511 P.troglodytes:272

L0P905              	100.00%		H2Q7Q1              	100.00%
                    	       		H2RDA1              	15.89%
                    	       		Q2QLE5              	14.28%
                    	       		H2QB21              	12.05%
                    	       		H2QZK4              	9.39%
                    	       		H2QT25              	8.78%
                    	       		H2QAM9              	7.83%
                    	       		H2RD79              	6.83%
                    	       		H2R5J8              	6.21%
Bootstrap support for L0P905 as seed ortholog is 100%.
Bootstrap support for H2Q7Q1 as seed ortholog is 99%.

Group of orthologs #195. Best score 509 bits
Score difference with first non-orthologous sequence - P.jiroveci:509 P.troglodytes:346

L0PAA4              	100.00%		H2Q8P9              	100.00%
                    	       		H2RCY8              	42.56%
Bootstrap support for L0PAA4 as seed ortholog is 100%.
Bootstrap support for H2Q8P9 as seed ortholog is 100%.

Group of orthologs #196. Best score 508 bits
Score difference with first non-orthologous sequence - P.jiroveci:284 P.troglodytes:203

L0P8E8              	100.00%		H2Q299              	100.00%
L0PEB0              	100.00%		
Bootstrap support for L0P8E8 as seed ortholog is 100%.
Bootstrap support for L0PEB0 as seed ortholog is 100%.
Bootstrap support for H2Q299 as seed ortholog is 99%.

Group of orthologs #197. Best score 508 bits
Score difference with first non-orthologous sequence - P.jiroveci:456 P.troglodytes:508

L0P7R1              	100.00%		H2QIS1              	100.00%
Bootstrap support for L0P7R1 as seed ortholog is 100%.
Bootstrap support for H2QIS1 as seed ortholog is 100%.

Group of orthologs #198. Best score 507 bits
Score difference with first non-orthologous sequence - P.jiroveci:507 P.troglodytes:287

L0P9A8              	100.00%		H2R647              	100.00%
L0PHB9              	76.30%		
Bootstrap support for L0P9A8 as seed ortholog is 100%.
Bootstrap support for H2R647 as seed ortholog is 100%.

Group of orthologs #199. Best score 507 bits
Score difference with first non-orthologous sequence - P.jiroveci:507 P.troglodytes:507

L0PAL6              	100.00%		H2Q1L9              	100.00%
Bootstrap support for L0PAL6 as seed ortholog is 100%.
Bootstrap support for H2Q1L9 as seed ortholog is 100%.

Group of orthologs #200. Best score 506 bits
Score difference with first non-orthologous sequence - P.jiroveci:506 P.troglodytes:378

L0P8Z9              	100.00%		H2R801              	100.00%
Bootstrap support for L0P8Z9 as seed ortholog is 100%.
Bootstrap support for H2R801 as seed ortholog is 100%.

Group of orthologs #201. Best score 505 bits
Score difference with first non-orthologous sequence - P.jiroveci:505 P.troglodytes:59

L0P890              	100.00%		H2QE47              	100.00%
                    	       		H2R0C8              	57.27%
Bootstrap support for L0P890 as seed ortholog is 100%.
Bootstrap support for H2QE47 as seed ortholog is 93%.

Group of orthologs #202. Best score 505 bits
Score difference with first non-orthologous sequence - P.jiroveci:505 P.troglodytes:392

L0PDG5              	100.00%		G2HFK3              	100.00%
Bootstrap support for L0PDG5 as seed ortholog is 100%.
Bootstrap support for G2HFK3 as seed ortholog is 100%.

Group of orthologs #203. Best score 505 bits
Score difference with first non-orthologous sequence - P.jiroveci:505 P.troglodytes:463

L0PB50              	100.00%		H2Q6M7              	100.00%
Bootstrap support for L0PB50 as seed ortholog is 100%.
Bootstrap support for H2Q6M7 as seed ortholog is 100%.

Group of orthologs #204. Best score 503 bits
Score difference with first non-orthologous sequence - P.jiroveci:503 P.troglodytes:503

L0PCV7              	100.00%		H2Q1J0              	100.00%
Bootstrap support for L0PCV7 as seed ortholog is 100%.
Bootstrap support for H2Q1J0 as seed ortholog is 100%.

Group of orthologs #205. Best score 500 bits
Score difference with first non-orthologous sequence - P.jiroveci:500 P.troglodytes:500

L0P8P8              	100.00%		H2R306              	100.00%
Bootstrap support for L0P8P8 as seed ortholog is 100%.
Bootstrap support for H2R306 as seed ortholog is 100%.

Group of orthologs #206. Best score 498 bits
Score difference with first non-orthologous sequence - P.jiroveci:498 P.troglodytes:498

L0PFZ9              	100.00%		H2R1L6              	100.00%
                    	       		H2QBY9              	31.27%
Bootstrap support for L0PFZ9 as seed ortholog is 100%.
Bootstrap support for H2R1L6 as seed ortholog is 100%.

Group of orthologs #207. Best score 497 bits
Score difference with first non-orthologous sequence - P.jiroveci:497 P.troglodytes:398

L0PDH7              	100.00%		H2Q966              	100.00%
Bootstrap support for L0PDH7 as seed ortholog is 100%.
Bootstrap support for H2Q966 as seed ortholog is 100%.

Group of orthologs #208. Best score 497 bits
Score difference with first non-orthologous sequence - P.jiroveci:497 P.troglodytes:497

L0PGE8              	100.00%		H2Q8P3              	100.00%
Bootstrap support for L0PGE8 as seed ortholog is 100%.
Bootstrap support for H2Q8P3 as seed ortholog is 100%.

Group of orthologs #209. Best score 496 bits
Score difference with first non-orthologous sequence - P.jiroveci:496 P.troglodytes:496

L0PC09              	100.00%		H2QND4              	100.00%
Bootstrap support for L0PC09 as seed ortholog is 100%.
Bootstrap support for H2QND4 as seed ortholog is 100%.

Group of orthologs #210. Best score 494 bits
Score difference with first non-orthologous sequence - P.jiroveci:494 P.troglodytes:280

L0P9J9              	100.00%		H2R7B1              	100.00%
Bootstrap support for L0P9J9 as seed ortholog is 100%.
Bootstrap support for H2R7B1 as seed ortholog is 100%.

Group of orthologs #211. Best score 494 bits
Score difference with first non-orthologous sequence - P.jiroveci:494 P.troglodytes:494

L0PFM4              	100.00%		H2RAD0              	100.00%
Bootstrap support for L0PFM4 as seed ortholog is 100%.
Bootstrap support for H2RAD0 as seed ortholog is 100%.

Group of orthologs #212. Best score 493 bits
Score difference with first non-orthologous sequence - P.jiroveci:493 P.troglodytes:493

L0P8F1              	100.00%		H2RCR7              	100.00%
                    	       		H2R9V8              	70.92%
                    	       		H2Q2S6              	68.32%
                    	       		H2QP63              	67.61%
Bootstrap support for L0P8F1 as seed ortholog is 100%.
Bootstrap support for H2RCR7 as seed ortholog is 100%.

Group of orthologs #213. Best score 491 bits
Score difference with first non-orthologous sequence - P.jiroveci:491 P.troglodytes:491

L0P6T3              	100.00%		H2QB89              	100.00%
Bootstrap support for L0P6T3 as seed ortholog is 100%.
Bootstrap support for H2QB89 as seed ortholog is 100%.

Group of orthologs #214. Best score 490 bits
Score difference with first non-orthologous sequence - P.jiroveci:53 P.troglodytes:294

L0PAI4              	100.00%		H2QQF0              	100.00%
                    	       		H2R0Q0              	53.64%
                    	       		H2QYA0              	24.59%
Bootstrap support for L0PAI4 as seed ortholog is 82%.
Bootstrap support for H2QQF0 as seed ortholog is 100%.

Group of orthologs #215. Best score 490 bits
Score difference with first non-orthologous sequence - P.jiroveci:313 P.troglodytes:490

L0PFN9              	100.00%		H2Q862              	100.00%
Bootstrap support for L0PFN9 as seed ortholog is 100%.
Bootstrap support for H2Q862 as seed ortholog is 100%.

Group of orthologs #216. Best score 489 bits
Score difference with first non-orthologous sequence - P.jiroveci:229 P.troglodytes:217

L0PAW8              	100.00%		H2QNM0              	100.00%
                    	       		H2QHS5              	11.23%
                    	       		H2QQX0              	5.81%
Bootstrap support for L0PAW8 as seed ortholog is 99%.
Bootstrap support for H2QNM0 as seed ortholog is 99%.

Group of orthologs #217. Best score 488 bits
Score difference with first non-orthologous sequence - P.jiroveci:272 P.troglodytes:488

L0PF08              	100.00%		H2QPY6              	100.00%
                    	       		H2Q237              	68.49%
                    	       		H2QVV0              	63.56%
Bootstrap support for L0PF08 as seed ortholog is 100%.
Bootstrap support for H2QPY6 as seed ortholog is 100%.

Group of orthologs #218. Best score 488 bits
Score difference with first non-orthologous sequence - P.jiroveci:488 P.troglodytes:488

L0PEL0              	100.00%		G2HEW3              	100.00%
Bootstrap support for L0PEL0 as seed ortholog is 100%.
Bootstrap support for G2HEW3 as seed ortholog is 100%.

Group of orthologs #219. Best score 486 bits
Score difference with first non-orthologous sequence - P.jiroveci:486 P.troglodytes:372

L0PGH3              	100.00%		H2Q7L5              	100.00%
                    	       		H2R298              	100.00%
Bootstrap support for L0PGH3 as seed ortholog is 100%.
Bootstrap support for H2Q7L5 as seed ortholog is 100%.
Bootstrap support for H2R298 as seed ortholog is 100%.

Group of orthologs #220. Best score 486 bits
Score difference with first non-orthologous sequence - P.jiroveci:486 P.troglodytes:486

L0PG55              	100.00%		H2R4A9              	100.00%
                    	       		P60028              	76.94%
Bootstrap support for L0PG55 as seed ortholog is 100%.
Bootstrap support for H2R4A9 as seed ortholog is 100%.

Group of orthologs #221. Best score 486 bits
Score difference with first non-orthologous sequence - P.jiroveci:486 P.troglodytes:433

L0P9G2              	100.00%		H2QAU9              	100.00%
Bootstrap support for L0P9G2 as seed ortholog is 100%.
Bootstrap support for H2QAU9 as seed ortholog is 100%.

Group of orthologs #222. Best score 486 bits
Score difference with first non-orthologous sequence - P.jiroveci:486 P.troglodytes:486

L0PAP1              	100.00%		H2QCI6              	100.00%
Bootstrap support for L0PAP1 as seed ortholog is 100%.
Bootstrap support for H2QCI6 as seed ortholog is 100%.

Group of orthologs #223. Best score 484 bits
Score difference with first non-orthologous sequence - P.jiroveci:352 P.troglodytes:203

L0PB67              	100.00%		H2Q5N0              	100.00%
                    	       		H2QSW7              	74.08%
Bootstrap support for L0PB67 as seed ortholog is 100%.
Bootstrap support for H2Q5N0 as seed ortholog is 100%.

Group of orthologs #224. Best score 484 bits
Score difference with first non-orthologous sequence - P.jiroveci:484 P.troglodytes:484

L0PB35              	100.00%		H2RAZ2              	100.00%
Bootstrap support for L0PB35 as seed ortholog is 100%.
Bootstrap support for H2RAZ2 as seed ortholog is 100%.

Group of orthologs #225. Best score 482 bits
Score difference with first non-orthologous sequence - P.jiroveci:482 P.troglodytes:482

L0PCY5              	100.00%		G2HG51              	100.00%
                    	       		H2QRM9              	50.29%
Bootstrap support for L0PCY5 as seed ortholog is 100%.
Bootstrap support for G2HG51 as seed ortholog is 100%.

Group of orthologs #226. Best score 480 bits
Score difference with first non-orthologous sequence - P.jiroveci:480 P.troglodytes:338

L0PFQ5              	100.00%		H2QGQ5              	100.00%
Bootstrap support for L0PFQ5 as seed ortholog is 100%.
Bootstrap support for H2QGQ5 as seed ortholog is 100%.

Group of orthologs #227. Best score 479 bits
Score difference with first non-orthologous sequence - P.jiroveci:215 P.troglodytes:136

L0PHY6              	100.00%		G2HGR6              	100.00%
Bootstrap support for L0PHY6 as seed ortholog is 100%.
Bootstrap support for G2HGR6 as seed ortholog is 99%.

Group of orthologs #228. Best score 479 bits
Score difference with first non-orthologous sequence - P.jiroveci:415 P.troglodytes:403

L0P992              	100.00%		H2R4T3              	100.00%
Bootstrap support for L0P992 as seed ortholog is 100%.
Bootstrap support for H2R4T3 as seed ortholog is 100%.

Group of orthologs #229. Best score 476 bits
Score difference with first non-orthologous sequence - P.jiroveci:476 P.troglodytes:476

L0PDC9              	100.00%		H2Q695              	100.00%
Bootstrap support for L0PDC9 as seed ortholog is 100%.
Bootstrap support for H2Q695 as seed ortholog is 100%.

Group of orthologs #230. Best score 476 bits
Score difference with first non-orthologous sequence - P.jiroveci:476 P.troglodytes:476

L0PFC2              	100.00%		H2QB13              	100.00%
Bootstrap support for L0PFC2 as seed ortholog is 100%.
Bootstrap support for H2QB13 as seed ortholog is 100%.

Group of orthologs #231. Best score 475 bits
Score difference with first non-orthologous sequence - P.jiroveci:475 P.troglodytes:475

L0PAC4              	100.00%		H2R8Y9              	100.00%
L0P871              	98.20%		
Bootstrap support for L0PAC4 as seed ortholog is 100%.
Bootstrap support for H2R8Y9 as seed ortholog is 100%.

Group of orthologs #232. Best score 472 bits
Score difference with first non-orthologous sequence - P.jiroveci:472 P.troglodytes:472

L0PCS3              	100.00%		G2HJD3              	100.00%
Bootstrap support for L0PCS3 as seed ortholog is 100%.
Bootstrap support for G2HJD3 as seed ortholog is 100%.

Group of orthologs #233. Best score 472 bits
Score difference with first non-orthologous sequence - P.jiroveci:343 P.troglodytes:260

L0PC38              	100.00%		H2QHZ9              	100.00%
Bootstrap support for L0PC38 as seed ortholog is 100%.
Bootstrap support for H2QHZ9 as seed ortholog is 100%.

Group of orthologs #234. Best score 470 bits
Score difference with first non-orthologous sequence - P.jiroveci:470 P.troglodytes:423

L0P9V7              	100.00%		H2Q241              	100.00%
Bootstrap support for L0P9V7 as seed ortholog is 100%.
Bootstrap support for H2Q241 as seed ortholog is 100%.

Group of orthologs #235. Best score 469 bits
Score difference with first non-orthologous sequence - P.jiroveci:355 P.troglodytes:335

L0PE30              	100.00%		H2QJS7              	100.00%
                    	       		H2RA57              	18.93%
Bootstrap support for L0PE30 as seed ortholog is 100%.
Bootstrap support for H2QJS7 as seed ortholog is 100%.

Group of orthologs #236. Best score 468 bits
Score difference with first non-orthologous sequence - P.jiroveci:468 P.troglodytes:170

L0PF23              	100.00%		H2Q2K1              	100.00%
Bootstrap support for L0PF23 as seed ortholog is 100%.
Bootstrap support for H2Q2K1 as seed ortholog is 99%.

Group of orthologs #237. Best score 468 bits
Score difference with first non-orthologous sequence - P.jiroveci:468 P.troglodytes:468

L0PG96              	100.00%		H2QMA1              	100.00%
Bootstrap support for L0PG96 as seed ortholog is 100%.
Bootstrap support for H2QMA1 as seed ortholog is 100%.

Group of orthologs #238. Best score 468 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 P.troglodytes:347

L0PFW2              	100.00%		H2RA87              	100.00%
Bootstrap support for L0PFW2 as seed ortholog is 99%.
Bootstrap support for H2RA87 as seed ortholog is 100%.

Group of orthologs #239. Best score 467 bits
Score difference with first non-orthologous sequence - P.jiroveci:360 P.troglodytes:310

L0P8C2              	100.00%		H2QCP3              	100.00%
Bootstrap support for L0P8C2 as seed ortholog is 100%.
Bootstrap support for H2QCP3 as seed ortholog is 100%.

Group of orthologs #240. Best score 466 bits
Score difference with first non-orthologous sequence - P.jiroveci:466 P.troglodytes:466

L0PDM3              	100.00%		H2Q457              	100.00%
Bootstrap support for L0PDM3 as seed ortholog is 100%.
Bootstrap support for H2Q457 as seed ortholog is 100%.

Group of orthologs #241. Best score 466 bits
Score difference with first non-orthologous sequence - P.jiroveci:389 P.troglodytes:376

L0P8N1              	100.00%		H2QHY8              	100.00%
Bootstrap support for L0P8N1 as seed ortholog is 100%.
Bootstrap support for H2QHY8 as seed ortholog is 100%.

Group of orthologs #242. Best score 466 bits
Score difference with first non-orthologous sequence - P.jiroveci:466 P.troglodytes:466

L0PBV8              	100.00%		H2QUG3              	100.00%
Bootstrap support for L0PBV8 as seed ortholog is 100%.
Bootstrap support for H2QUG3 as seed ortholog is 100%.

Group of orthologs #243. Best score 465 bits
Score difference with first non-orthologous sequence - P.jiroveci:465 P.troglodytes:465

L0P9C8              	100.00%		H2RC86              	100.00%
Bootstrap support for L0P9C8 as seed ortholog is 100%.
Bootstrap support for H2RC86 as seed ortholog is 100%.

Group of orthologs #244. Best score 461 bits
Score difference with first non-orthologous sequence - P.jiroveci:461 P.troglodytes:461

L0PFR4              	100.00%		H2R6M5              	100.00%
                    	       		H2Q9J6              	21.33%
Bootstrap support for L0PFR4 as seed ortholog is 100%.
Bootstrap support for H2R6M5 as seed ortholog is 100%.

Group of orthologs #245. Best score 461 bits
Score difference with first non-orthologous sequence - P.jiroveci:253 P.troglodytes:461

L0PED9              	100.00%		H2QMK8              	100.00%
Bootstrap support for L0PED9 as seed ortholog is 99%.
Bootstrap support for H2QMK8 as seed ortholog is 100%.

Group of orthologs #246. Best score 460 bits
Score difference with first non-orthologous sequence - P.jiroveci:460 P.troglodytes:460

L0P7D2              	100.00%		G2HGZ3              	100.00%
                    	       		H2QEQ1              	14.43%
Bootstrap support for L0P7D2 as seed ortholog is 100%.
Bootstrap support for G2HGZ3 as seed ortholog is 100%.

Group of orthologs #247. Best score 460 bits
Score difference with first non-orthologous sequence - P.jiroveci:460 P.troglodytes:165

L0P8R6              	100.00%		H2R419              	100.00%
Bootstrap support for L0P8R6 as seed ortholog is 100%.
Bootstrap support for H2R419 as seed ortholog is 99%.

Group of orthologs #248. Best score 460 bits
Score difference with first non-orthologous sequence - P.jiroveci:460 P.troglodytes:460

L0PHB7              	100.00%		H2RF90              	100.00%
Bootstrap support for L0PHB7 as seed ortholog is 100%.
Bootstrap support for H2RF90 as seed ortholog is 100%.

Group of orthologs #249. Best score 459 bits
Score difference with first non-orthologous sequence - P.jiroveci:319 P.troglodytes:295

L0PDA0              	100.00%		H2R1U2              	100.00%
                    	       		H2R2L6              	55.41%
Bootstrap support for L0PDA0 as seed ortholog is 100%.
Bootstrap support for H2R1U2 as seed ortholog is 100%.

Group of orthologs #250. Best score 456 bits
Score difference with first non-orthologous sequence - P.jiroveci:456 P.troglodytes:456

L0PCL9              	100.00%		H2Q956              	100.00%
Bootstrap support for L0PCL9 as seed ortholog is 100%.
Bootstrap support for H2Q956 as seed ortholog is 100%.

Group of orthologs #251. Best score 456 bits
Score difference with first non-orthologous sequence - P.jiroveci:338 P.troglodytes:233

L0PEM1              	100.00%		H2QKJ5              	100.00%
Bootstrap support for L0PEM1 as seed ortholog is 100%.
Bootstrap support for H2QKJ5 as seed ortholog is 100%.

Group of orthologs #252. Best score 455 bits
Score difference with first non-orthologous sequence - P.jiroveci:455 P.troglodytes:455

L0PBT8              	100.00%		H2QHF7              	100.00%
Bootstrap support for L0PBT8 as seed ortholog is 100%.
Bootstrap support for H2QHF7 as seed ortholog is 100%.

Group of orthologs #253. Best score 455 bits
Score difference with first non-orthologous sequence - P.jiroveci:455 P.troglodytes:455

L0P7P1              	100.00%		H2R594              	100.00%
Bootstrap support for L0P7P1 as seed ortholog is 100%.
Bootstrap support for H2R594 as seed ortholog is 100%.

Group of orthologs #254. Best score 454 bits
Score difference with first non-orthologous sequence - P.jiroveci:454 P.troglodytes:454

L0PER3              	100.00%		G2HG47              	100.00%
Bootstrap support for L0PER3 as seed ortholog is 100%.
Bootstrap support for G2HG47 as seed ortholog is 100%.

Group of orthologs #255. Best score 453 bits
Score difference with first non-orthologous sequence - P.jiroveci:453 P.troglodytes:453

L0PC82              	100.00%		H2PZT1              	100.00%
                    	       		H2QQU5              	100.00%
Bootstrap support for L0PC82 as seed ortholog is 100%.
Bootstrap support for H2PZT1 as seed ortholog is 100%.
Bootstrap support for H2QQU5 as seed ortholog is 100%.

Group of orthologs #256. Best score 451 bits
Score difference with first non-orthologous sequence - P.jiroveci:451 P.troglodytes:451

L0P9C9              	100.00%		H2QTC0              	100.00%
Bootstrap support for L0P9C9 as seed ortholog is 100%.
Bootstrap support for H2QTC0 as seed ortholog is 100%.

Group of orthologs #257. Best score 450 bits
Score difference with first non-orthologous sequence - P.jiroveci:450 P.troglodytes:450

L0PGB8              	100.00%		H2RFP7              	100.00%
                    	       		H2QES6              	72.92%
Bootstrap support for L0PGB8 as seed ortholog is 100%.
Bootstrap support for H2RFP7 as seed ortholog is 100%.

Group of orthologs #258. Best score 450 bits
Score difference with first non-orthologous sequence - P.jiroveci:450 P.troglodytes:450

L0P969              	100.00%		H2QEM3              	100.00%
Bootstrap support for L0P969 as seed ortholog is 100%.
Bootstrap support for H2QEM3 as seed ortholog is 100%.

Group of orthologs #259. Best score 450 bits
Score difference with first non-orthologous sequence - P.jiroveci:450 P.troglodytes:450

L0PF49              	100.00%		H2QYB7              	100.00%
Bootstrap support for L0PF49 as seed ortholog is 100%.
Bootstrap support for H2QYB7 as seed ortholog is 100%.

Group of orthologs #260. Best score 447 bits
Score difference with first non-orthologous sequence - P.jiroveci:447 P.troglodytes:143

L0PE41              	100.00%		H2R1L2              	100.00%
Bootstrap support for L0PE41 as seed ortholog is 100%.
Bootstrap support for H2R1L2 as seed ortholog is 99%.

Group of orthologs #261. Best score 445 bits
Score difference with first non-orthologous sequence - P.jiroveci:445 P.troglodytes:445

L0PAE9              	100.00%		H2QJU9              	100.00%
Bootstrap support for L0PAE9 as seed ortholog is 100%.
Bootstrap support for H2QJU9 as seed ortholog is 100%.

Group of orthologs #262. Best score 445 bits
Score difference with first non-orthologous sequence - P.jiroveci:445 P.troglodytes:445

L0PBN1              	100.00%		H2QMF8              	100.00%
Bootstrap support for L0PBN1 as seed ortholog is 100%.
Bootstrap support for H2QMF8 as seed ortholog is 100%.

Group of orthologs #263. Best score 445 bits
Score difference with first non-orthologous sequence - P.jiroveci:355 P.troglodytes:290

L0PC98              	100.00%		H2QUI5              	100.00%
Bootstrap support for L0PC98 as seed ortholog is 100%.
Bootstrap support for H2QUI5 as seed ortholog is 100%.

Group of orthologs #264. Best score 443 bits
Score difference with first non-orthologous sequence - P.jiroveci:443 P.troglodytes:180

L0PCE9              	100.00%		H2QJJ1              	100.00%
Bootstrap support for L0PCE9 as seed ortholog is 100%.
Bootstrap support for H2QJJ1 as seed ortholog is 99%.

Group of orthologs #265. Best score 442 bits
Score difference with first non-orthologous sequence - P.jiroveci:442 P.troglodytes:30

L0P9H5              	100.00%		H2QHV0              	100.00%
L0P8S4              	53.92%		H2Q8F2              	43.57%
                    	       		H2QDQ1              	13.60%
                    	       		H2QAS6              	11.84%
                    	       		H2R0T5              	11.01%
Bootstrap support for L0P9H5 as seed ortholog is 100%.
Bootstrap support for H2QHV0 as seed ortholog is 93%.

Group of orthologs #266. Best score 442 bits
Score difference with first non-orthologous sequence - P.jiroveci:329 P.troglodytes:285

L0PHE4              	100.00%		H2QIL4              	100.00%
                    	       		H2QVN4              	85.85%
Bootstrap support for L0PHE4 as seed ortholog is 100%.
Bootstrap support for H2QIL4 as seed ortholog is 100%.

Group of orthologs #267. Best score 442 bits
Score difference with first non-orthologous sequence - P.jiroveci:442 P.troglodytes:442

L0P9I4              	100.00%		G2HFP5              	100.00%
Bootstrap support for L0P9I4 as seed ortholog is 100%.
Bootstrap support for G2HFP5 as seed ortholog is 100%.

Group of orthologs #268. Best score 441 bits
Score difference with first non-orthologous sequence - P.jiroveci:245 P.troglodytes:144

L0PFB1              	100.00%		H2PZ45              	100.00%
                    	       		H2R5J1              	58.85%
Bootstrap support for L0PFB1 as seed ortholog is 100%.
Bootstrap support for H2PZ45 as seed ortholog is 99%.

Group of orthologs #269. Best score 439 bits
Score difference with first non-orthologous sequence - P.jiroveci:350 P.troglodytes:266

L0PAL3              	100.00%		H2R3P3              	100.00%
                    	       		H2QV71              	34.07%
                    	       		H2R450              	22.38%
Bootstrap support for L0PAL3 as seed ortholog is 100%.
Bootstrap support for H2R3P3 as seed ortholog is 100%.

Group of orthologs #270. Best score 438 bits
Score difference with first non-orthologous sequence - P.jiroveci:210 P.troglodytes:438

L0P6T8              	100.00%		H2R5M9              	100.00%
                    	       		H2QA32              	51.95%
                    	       		H2R8K2              	28.60%
Bootstrap support for L0P6T8 as seed ortholog is 100%.
Bootstrap support for H2R5M9 as seed ortholog is 100%.

Group of orthologs #271. Best score 438 bits
Score difference with first non-orthologous sequence - P.jiroveci:290 P.troglodytes:151

L0PGV4              	100.00%		H2QIE2              	100.00%
                    	       		H2Q2H7              	85.17%
Bootstrap support for L0PGV4 as seed ortholog is 100%.
Bootstrap support for H2QIE2 as seed ortholog is 100%.

Group of orthologs #272. Best score 437 bits
Score difference with first non-orthologous sequence - P.jiroveci:437 P.troglodytes:437

L0P9J7              	100.00%		H2QFG3              	100.00%
Bootstrap support for L0P9J7 as seed ortholog is 100%.
Bootstrap support for H2QFG3 as seed ortholog is 100%.

Group of orthologs #273. Best score 436 bits
Score difference with first non-orthologous sequence - P.jiroveci:436 P.troglodytes:256

L0P6W8              	100.00%		H2Q6X5              	100.00%
L0PH46              	100.00%		
Bootstrap support for L0P6W8 as seed ortholog is 100%.
Bootstrap support for L0PH46 as seed ortholog is 100%.
Bootstrap support for H2Q6X5 as seed ortholog is 100%.

Group of orthologs #274. Best score 436 bits
Score difference with first non-orthologous sequence - P.jiroveci:436 P.troglodytes:436

L0PB32              	100.00%		H2QPF9              	100.00%
                    	       		H2RA71              	56.64%
Bootstrap support for L0PB32 as seed ortholog is 100%.
Bootstrap support for H2QPF9 as seed ortholog is 100%.

Group of orthologs #275. Best score 436 bits
Score difference with first non-orthologous sequence - P.jiroveci:436 P.troglodytes:265

L0PFE7              	100.00%		H2R7N8              	100.00%
Bootstrap support for L0PFE7 as seed ortholog is 100%.
Bootstrap support for H2R7N8 as seed ortholog is 100%.

Group of orthologs #276. Best score 435 bits
Score difference with first non-orthologous sequence - P.jiroveci:435 P.troglodytes:184

L0PGN1              	100.00%		H2Q7R2              	100.00%
                    	       		H2QK60              	12.10%
Bootstrap support for L0PGN1 as seed ortholog is 100%.
Bootstrap support for H2Q7R2 as seed ortholog is 99%.

Group of orthologs #277. Best score 433 bits
Score difference with first non-orthologous sequence - P.jiroveci:433 P.troglodytes:433

L0PDS0              	100.00%		H2Q5A5              	100.00%
Bootstrap support for L0PDS0 as seed ortholog is 100%.
Bootstrap support for H2Q5A5 as seed ortholog is 100%.

Group of orthologs #278. Best score 433 bits
Score difference with first non-orthologous sequence - P.jiroveci:433 P.troglodytes:308

L0PD24              	100.00%		H2R5K5              	100.00%
Bootstrap support for L0PD24 as seed ortholog is 100%.
Bootstrap support for H2R5K5 as seed ortholog is 100%.

Group of orthologs #279. Best score 431 bits
Score difference with first non-orthologous sequence - P.jiroveci:431 P.troglodytes:431

L0PBL0              	100.00%		H2RAJ6              	100.00%
                    	       		H2QTY6              	26.13%
Bootstrap support for L0PBL0 as seed ortholog is 100%.
Bootstrap support for H2RAJ6 as seed ortholog is 100%.

Group of orthologs #280. Best score 429 bits
Score difference with first non-orthologous sequence - P.jiroveci:130 P.troglodytes:71

L0PGJ9              	100.00%		H2QB18              	100.00%
Bootstrap support for L0PGJ9 as seed ortholog is 99%.
Bootstrap support for H2QB18 as seed ortholog is 88%.

Group of orthologs #281. Best score 428 bits
Score difference with first non-orthologous sequence - P.jiroveci:428 P.troglodytes:428

L0PEE3              	100.00%		H2Q9R0              	100.00%
                    	       		H2RBP4              	41.77%
Bootstrap support for L0PEE3 as seed ortholog is 100%.
Bootstrap support for H2Q9R0 as seed ortholog is 100%.

Group of orthologs #282. Best score 427 bits
Score difference with first non-orthologous sequence - P.jiroveci:427 P.troglodytes:427

L0PDM0              	100.00%		H2R0H6              	100.00%
                    	       		H2QRA2              	45.92%
Bootstrap support for L0PDM0 as seed ortholog is 100%.
Bootstrap support for H2R0H6 as seed ortholog is 100%.

Group of orthologs #283. Best score 426 bits
Score difference with first non-orthologous sequence - P.jiroveci:426 P.troglodytes:325

L0PF52              	100.00%		H2QUZ0              	100.00%
                    	       		H2QIZ2              	68.94%
Bootstrap support for L0PF52 as seed ortholog is 100%.
Bootstrap support for H2QUZ0 as seed ortholog is 100%.

Group of orthologs #284. Best score 426 bits
Score difference with first non-orthologous sequence - P.jiroveci:426 P.troglodytes:328

L0PI36              	100.00%		H2Q847              	100.00%
Bootstrap support for L0PI36 as seed ortholog is 100%.
Bootstrap support for H2Q847 as seed ortholog is 100%.

Group of orthologs #285. Best score 426 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 P.troglodytes:274

L0PFS3              	100.00%		H2R2K5              	100.00%
Bootstrap support for L0PFS3 as seed ortholog is 99%.
Bootstrap support for H2R2K5 as seed ortholog is 100%.

Group of orthologs #286. Best score 425 bits
Score difference with first non-orthologous sequence - P.jiroveci:425 P.troglodytes:425

L0PGU0              	100.00%		H2QGT6              	100.00%
Bootstrap support for L0PGU0 as seed ortholog is 100%.
Bootstrap support for H2QGT6 as seed ortholog is 100%.

Group of orthologs #287. Best score 425 bits
Score difference with first non-orthologous sequence - P.jiroveci:425 P.troglodytes:425

L0PCQ7              	100.00%		H2R1F9              	100.00%
Bootstrap support for L0PCQ7 as seed ortholog is 100%.
Bootstrap support for H2R1F9 as seed ortholog is 100%.

Group of orthologs #288. Best score 424 bits
Score difference with first non-orthologous sequence - P.jiroveci:424 P.troglodytes:328

L0P7Z6              	100.00%		H2QFC4              	100.00%
Bootstrap support for L0P7Z6 as seed ortholog is 100%.
Bootstrap support for H2QFC4 as seed ortholog is 100%.

Group of orthologs #289. Best score 422 bits
Score difference with first non-orthologous sequence - P.jiroveci:422 P.troglodytes:312

L0PAL8              	100.00%		H2R1G1              	100.00%
Bootstrap support for L0PAL8 as seed ortholog is 100%.
Bootstrap support for H2R1G1 as seed ortholog is 100%.

Group of orthologs #290. Best score 421 bits
Score difference with first non-orthologous sequence - P.jiroveci:421 P.troglodytes:421

L0PAH2              	100.00%		H2PYL0              	100.00%
Bootstrap support for L0PAH2 as seed ortholog is 100%.
Bootstrap support for H2PYL0 as seed ortholog is 100%.

Group of orthologs #291. Best score 421 bits
Score difference with first non-orthologous sequence - P.jiroveci:421 P.troglodytes:421

L0P8X3              	100.00%		H2R5D5              	100.00%
Bootstrap support for L0P8X3 as seed ortholog is 100%.
Bootstrap support for H2R5D5 as seed ortholog is 100%.

Group of orthologs #292. Best score 419 bits
Score difference with first non-orthologous sequence - P.jiroveci:419 P.troglodytes:419

L0PEE4              	100.00%		H2PZ62              	100.00%
                    	       		H2QXB7              	53.69%
Bootstrap support for L0PEE4 as seed ortholog is 100%.
Bootstrap support for H2PZ62 as seed ortholog is 100%.

Group of orthologs #293. Best score 419 bits
Score difference with first non-orthologous sequence - P.jiroveci:419 P.troglodytes:151

L0PFJ5              	100.00%		H2PXZ4              	100.00%
Bootstrap support for L0PFJ5 as seed ortholog is 100%.
Bootstrap support for H2PXZ4 as seed ortholog is 99%.

Group of orthologs #294. Best score 417 bits
Score difference with first non-orthologous sequence - P.jiroveci:417 P.troglodytes:256

L0PDT0              	100.00%		G2HF91              	100.00%
Bootstrap support for L0PDT0 as seed ortholog is 100%.
Bootstrap support for G2HF91 as seed ortholog is 100%.

Group of orthologs #295. Best score 417 bits
Score difference with first non-orthologous sequence - P.jiroveci:417 P.troglodytes:417

L0P7S7              	100.00%		H2Q9E2              	100.00%
Bootstrap support for L0P7S7 as seed ortholog is 100%.
Bootstrap support for H2Q9E2 as seed ortholog is 100%.

Group of orthologs #296. Best score 417 bits
Score difference with first non-orthologous sequence - P.jiroveci:417 P.troglodytes:417

L0PBE9              	100.00%		H2Q8Q1              	100.00%
Bootstrap support for L0PBE9 as seed ortholog is 100%.
Bootstrap support for H2Q8Q1 as seed ortholog is 100%.

Group of orthologs #297. Best score 416 bits
Score difference with first non-orthologous sequence - P.jiroveci:416 P.troglodytes:315

L0PB23              	100.00%		H2Q7T6              	100.00%
Bootstrap support for L0PB23 as seed ortholog is 100%.
Bootstrap support for H2Q7T6 as seed ortholog is 100%.

Group of orthologs #298. Best score 416 bits
Score difference with first non-orthologous sequence - P.jiroveci:416 P.troglodytes:277

L0PCN1              	100.00%		H2QIW0              	100.00%
Bootstrap support for L0PCN1 as seed ortholog is 100%.
Bootstrap support for H2QIW0 as seed ortholog is 100%.

Group of orthologs #299. Best score 415 bits
Score difference with first non-orthologous sequence - P.jiroveci:228 P.troglodytes:141

L0P6V9              	100.00%		H2QYZ4              	100.00%
                    	       		H2QYA6              	55.61%
Bootstrap support for L0P6V9 as seed ortholog is 100%.
Bootstrap support for H2QYZ4 as seed ortholog is 100%.

Group of orthologs #300. Best score 414 bits
Score difference with first non-orthologous sequence - P.jiroveci:414 P.troglodytes:414

L0P8F2              	100.00%		H2R4Q5              	100.00%
L0PAK7              	100.00%		
Bootstrap support for L0P8F2 as seed ortholog is 100%.
Bootstrap support for L0PAK7 as seed ortholog is 100%.
Bootstrap support for H2R4Q5 as seed ortholog is 100%.

Group of orthologs #301. Best score 414 bits
Score difference with first non-orthologous sequence - P.jiroveci:414 P.troglodytes:257

L0PA15              	100.00%		H2QNU8              	100.00%
Bootstrap support for L0PA15 as seed ortholog is 100%.
Bootstrap support for H2QNU8 as seed ortholog is 100%.

Group of orthologs #302. Best score 413 bits
Score difference with first non-orthologous sequence - P.jiroveci:356 P.troglodytes:413

L0P7M4              	100.00%		H2QVT8              	100.00%
L0PH62              	49.37%		H2QI31              	74.46%
Bootstrap support for L0P7M4 as seed ortholog is 100%.
Bootstrap support for H2QVT8 as seed ortholog is 100%.

Group of orthologs #303. Best score 412 bits
Score difference with first non-orthologous sequence - P.jiroveci:412 P.troglodytes:412

L0PEX5              	100.00%		H2QM75              	100.00%
Bootstrap support for L0PEX5 as seed ortholog is 100%.
Bootstrap support for H2QM75 as seed ortholog is 100%.

Group of orthologs #304. Best score 411 bits
Score difference with first non-orthologous sequence - P.jiroveci:411 P.troglodytes:411

L0PE52              	100.00%		H2QPC6              	100.00%
L0PIN5              	49.01%		
Bootstrap support for L0PE52 as seed ortholog is 100%.
Bootstrap support for H2QPC6 as seed ortholog is 100%.

Group of orthologs #305. Best score 411 bits
Score difference with first non-orthologous sequence - P.jiroveci:411 P.troglodytes:411

L0PB18              	100.00%		H2R0F5              	100.00%
Bootstrap support for L0PB18 as seed ortholog is 100%.
Bootstrap support for H2R0F5 as seed ortholog is 100%.

Group of orthologs #306. Best score 410 bits
Score difference with first non-orthologous sequence - P.jiroveci:203 P.troglodytes:95

L0PAN3              	100.00%		H2QP14              	100.00%
L0PE81              	100.00%		Q7YQL4              	100.00%
                    	       		H2Q4G3              	46.01%
Bootstrap support for L0PAN3 as seed ortholog is 100%.
Bootstrap support for L0PE81 as seed ortholog is 100%.
Bootstrap support for H2QP14 as seed ortholog is 99%.
Bootstrap support for Q7YQL4 as seed ortholog is 98%.

Group of orthologs #307. Best score 410 bits
Score difference with first non-orthologous sequence - P.jiroveci:410 P.troglodytes:410

L0PG82              	100.00%		H2Q4K5              	100.00%
Bootstrap support for L0PG82 as seed ortholog is 100%.
Bootstrap support for H2Q4K5 as seed ortholog is 100%.

Group of orthologs #308. Best score 409 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 P.troglodytes:13

L0PAY3              	100.00%		H2QDX1              	100.00%
                    	       		H2Q670              	28.23%
Bootstrap support for L0PAY3 as seed ortholog is 99%.
Bootstrap support for H2QDX1 as seed ortholog is 67%.
Alternative seed ortholog is H2R7P8 (13 bits away from this cluster)

Group of orthologs #309. Best score 409 bits
Score difference with first non-orthologous sequence - P.jiroveci:409 P.troglodytes:409

L0PGA8              	100.00%		H2QI84              	100.00%
Bootstrap support for L0PGA8 as seed ortholog is 100%.
Bootstrap support for H2QI84 as seed ortholog is 100%.

Group of orthologs #310. Best score 408 bits
Score difference with first non-orthologous sequence - P.jiroveci:408 P.troglodytes:408

L0P8Z3              	100.00%		H2QNN7              	100.00%
Bootstrap support for L0P8Z3 as seed ortholog is 100%.
Bootstrap support for H2QNN7 as seed ortholog is 100%.

Group of orthologs #311. Best score 407 bits
Score difference with first non-orthologous sequence - P.jiroveci:407 P.troglodytes:407

L0PAN7              	100.00%		H2QCM9              	100.00%
Bootstrap support for L0PAN7 as seed ortholog is 100%.
Bootstrap support for H2QCM9 as seed ortholog is 100%.

Group of orthologs #312. Best score 406 bits
Score difference with first non-orthologous sequence - P.jiroveci:406 P.troglodytes:406

L0PFY1              	100.00%		H2Q900              	100.00%
                    	       		H2Q1F7              	34.78%
Bootstrap support for L0PFY1 as seed ortholog is 100%.
Bootstrap support for H2Q900 as seed ortholog is 100%.

Group of orthologs #313. Best score 405 bits
Score difference with first non-orthologous sequence - P.jiroveci:405 P.troglodytes:405

L0PE98              	100.00%		H2Q8W4              	100.00%
                    	       		H2QHY1              	41.31%
Bootstrap support for L0PE98 as seed ortholog is 100%.
Bootstrap support for H2Q8W4 as seed ortholog is 100%.

Group of orthologs #314. Best score 403 bits
Score difference with first non-orthologous sequence - P.jiroveci:403 P.troglodytes:180

L0P702              	100.00%		H2QS56              	100.00%
Bootstrap support for L0P702 as seed ortholog is 100%.
Bootstrap support for H2QS56 as seed ortholog is 99%.

Group of orthologs #315. Best score 403 bits
Score difference with first non-orthologous sequence - P.jiroveci:403 P.troglodytes:403

L0PHJ7              	100.00%		H2QI63              	100.00%
Bootstrap support for L0PHJ7 as seed ortholog is 100%.
Bootstrap support for H2QI63 as seed ortholog is 100%.

Group of orthologs #316. Best score 403 bits
Score difference with first non-orthologous sequence - P.jiroveci:403 P.troglodytes:403

L0PIC6              	100.00%		H2R2Z8              	100.00%
Bootstrap support for L0PIC6 as seed ortholog is 100%.
Bootstrap support for H2R2Z8 as seed ortholog is 100%.

Group of orthologs #317. Best score 402 bits
Score difference with first non-orthologous sequence - P.jiroveci:402 P.troglodytes:194

L0PBF6              	100.00%		H2QMR0              	100.00%
Bootstrap support for L0PBF6 as seed ortholog is 100%.
Bootstrap support for H2QMR0 as seed ortholog is 100%.

Group of orthologs #318. Best score 402 bits
Score difference with first non-orthologous sequence - P.jiroveci:402 P.troglodytes:219

L0PGJ5              	100.00%		H2QU53              	100.00%
Bootstrap support for L0PGJ5 as seed ortholog is 100%.
Bootstrap support for H2QU53 as seed ortholog is 99%.

Group of orthologs #319. Best score 402 bits
Score difference with first non-orthologous sequence - P.jiroveci:402 P.troglodytes:202

L0PCL4              	100.00%		H2R7K9              	100.00%
Bootstrap support for L0PCL4 as seed ortholog is 100%.
Bootstrap support for H2R7K9 as seed ortholog is 99%.

Group of orthologs #320. Best score 401 bits
Score difference with first non-orthologous sequence - P.jiroveci:401 P.troglodytes:120

L0PCP3              	100.00%		H2Q4S0              	100.00%
Bootstrap support for L0PCP3 as seed ortholog is 100%.
Bootstrap support for H2Q4S0 as seed ortholog is 99%.

Group of orthologs #321. Best score 401 bits
Score difference with first non-orthologous sequence - P.jiroveci:401 P.troglodytes:281

L0P6U6              	100.00%		H2QVM9              	100.00%
Bootstrap support for L0P6U6 as seed ortholog is 100%.
Bootstrap support for H2QVM9 as seed ortholog is 100%.

Group of orthologs #322. Best score 400 bits
Score difference with first non-orthologous sequence - P.jiroveci:400 P.troglodytes:400

L0P6R7              	100.00%		H2QAU7              	100.00%
Bootstrap support for L0P6R7 as seed ortholog is 100%.
Bootstrap support for H2QAU7 as seed ortholog is 100%.

Group of orthologs #323. Best score 400 bits
Score difference with first non-orthologous sequence - P.jiroveci:400 P.troglodytes:156

L0PBM9              	100.00%		H2Q742              	100.00%
Bootstrap support for L0PBM9 as seed ortholog is 100%.
Bootstrap support for H2Q742 as seed ortholog is 99%.

Group of orthologs #324. Best score 400 bits
Score difference with first non-orthologous sequence - P.jiroveci:400 P.troglodytes:36

L0PA13              	100.00%		H2QA33              	100.00%
Bootstrap support for L0PA13 as seed ortholog is 100%.
Bootstrap support for H2QA33 as seed ortholog is 72%.
Alternative seed ortholog is H2RE00 (36 bits away from this cluster)

Group of orthologs #325. Best score 400 bits
Score difference with first non-orthologous sequence - P.jiroveci:400 P.troglodytes:400

L0PAB3              	100.00%		H2R7H3              	100.00%
Bootstrap support for L0PAB3 as seed ortholog is 100%.
Bootstrap support for H2R7H3 as seed ortholog is 100%.

Group of orthologs #326. Best score 398 bits
Score difference with first non-orthologous sequence - P.jiroveci:398 P.troglodytes:398

L0PAM5              	100.00%		H2R981              	100.00%
                    	       		H2R4J9              	23.37%
Bootstrap support for L0PAM5 as seed ortholog is 100%.
Bootstrap support for H2R981 as seed ortholog is 100%.

Group of orthologs #327. Best score 398 bits
Score difference with first non-orthologous sequence - P.jiroveci:309 P.troglodytes:267

L0PA57              	100.00%		H2QXQ4              	100.00%
Bootstrap support for L0PA57 as seed ortholog is 100%.
Bootstrap support for H2QXQ4 as seed ortholog is 100%.

Group of orthologs #328. Best score 396 bits
Score difference with first non-orthologous sequence - P.jiroveci:396 P.troglodytes:295

L0PB82              	100.00%		H2QEV8              	100.00%
Bootstrap support for L0PB82 as seed ortholog is 100%.
Bootstrap support for H2QEV8 as seed ortholog is 99%.

Group of orthologs #329. Best score 395 bits
Score difference with first non-orthologous sequence - P.jiroveci:395 P.troglodytes:395

L0P942              	100.00%		G2HFG8              	100.00%
L0P7J6              	57.88%		H2QQY0              	6.45%
Bootstrap support for L0P942 as seed ortholog is 100%.
Bootstrap support for G2HFG8 as seed ortholog is 100%.

Group of orthologs #330. Best score 395 bits
Score difference with first non-orthologous sequence - P.jiroveci:395 P.troglodytes:395

L0PCV8              	100.00%		G2HHB2              	100.00%
Bootstrap support for L0PCV8 as seed ortholog is 100%.
Bootstrap support for G2HHB2 as seed ortholog is 100%.

Group of orthologs #331. Best score 394 bits
Score difference with first non-orthologous sequence - P.jiroveci:394 P.troglodytes:333

L0P7N1              	100.00%		H2QAL3              	100.00%
Bootstrap support for L0P7N1 as seed ortholog is 100%.
Bootstrap support for H2QAL3 as seed ortholog is 100%.

Group of orthologs #332. Best score 393 bits
Score difference with first non-orthologous sequence - P.jiroveci:393 P.troglodytes:393

L0PI13              	100.00%		H2Q0Q5              	100.00%
Bootstrap support for L0PI13 as seed ortholog is 100%.
Bootstrap support for H2Q0Q5 as seed ortholog is 100%.

Group of orthologs #333. Best score 393 bits
Score difference with first non-orthologous sequence - P.jiroveci:393 P.troglodytes:157

L0PB68              	100.00%		H2Q9W0              	100.00%
Bootstrap support for L0PB68 as seed ortholog is 100%.
Bootstrap support for H2Q9W0 as seed ortholog is 100%.

Group of orthologs #334. Best score 393 bits
Score difference with first non-orthologous sequence - P.jiroveci:393 P.troglodytes:210

L0PEA7              	100.00%		H2QGM7              	100.00%
Bootstrap support for L0PEA7 as seed ortholog is 100%.
Bootstrap support for H2QGM7 as seed ortholog is 99%.

Group of orthologs #335. Best score 393 bits
Score difference with first non-orthologous sequence - P.jiroveci:393 P.troglodytes:172

L0P9R8              	100.00%		H2QUS7              	100.00%
Bootstrap support for L0P9R8 as seed ortholog is 100%.
Bootstrap support for H2QUS7 as seed ortholog is 99%.

Group of orthologs #336. Best score 392 bits
Score difference with first non-orthologous sequence - P.jiroveci:392 P.troglodytes:257

L0PHI3              	100.00%		H2R7V1              	100.00%
Bootstrap support for L0PHI3 as seed ortholog is 100%.
Bootstrap support for H2R7V1 as seed ortholog is 100%.

Group of orthologs #337. Best score 391 bits
Score difference with first non-orthologous sequence - P.jiroveci:391 P.troglodytes:289

L0PFP2              	100.00%		H2QLN6              	100.00%
Bootstrap support for L0PFP2 as seed ortholog is 100%.
Bootstrap support for H2QLN6 as seed ortholog is 100%.

Group of orthologs #338. Best score 389 bits
Score difference with first non-orthologous sequence - P.jiroveci:389 P.troglodytes:389

L0PCR5              	100.00%		H2RC22              	100.00%
L0P9C2              	55.61%		H2QD84              	55.31%
Bootstrap support for L0PCR5 as seed ortholog is 100%.
Bootstrap support for H2RC22 as seed ortholog is 100%.

Group of orthologs #339. Best score 388 bits
Score difference with first non-orthologous sequence - P.jiroveci:388 P.troglodytes:388

L0PEY9              	100.00%		H2QRK2              	100.00%
Bootstrap support for L0PEY9 as seed ortholog is 100%.
Bootstrap support for H2QRK2 as seed ortholog is 100%.

Group of orthologs #340. Best score 388 bits
Score difference with first non-orthologous sequence - P.jiroveci:388 P.troglodytes:388

L0PFP6              	100.00%		H2QTW3              	100.00%
Bootstrap support for L0PFP6 as seed ortholog is 100%.
Bootstrap support for H2QTW3 as seed ortholog is 100%.

Group of orthologs #341. Best score 386 bits
Score difference with first non-orthologous sequence - P.jiroveci:386 P.troglodytes:386

L0PCH8              	100.00%		H2QBV3              	100.00%
Bootstrap support for L0PCH8 as seed ortholog is 100%.
Bootstrap support for H2QBV3 as seed ortholog is 100%.

Group of orthologs #342. Best score 386 bits
Score difference with first non-orthologous sequence - P.jiroveci:386 P.troglodytes:386

L0PFD9              	100.00%		H2QTS4              	100.00%
Bootstrap support for L0PFD9 as seed ortholog is 100%.
Bootstrap support for H2QTS4 as seed ortholog is 100%.

Group of orthologs #343. Best score 386 bits
Score difference with first non-orthologous sequence - P.jiroveci:333 P.troglodytes:386

L0PID0              	100.00%		H2QWY1              	100.00%
Bootstrap support for L0PID0 as seed ortholog is 100%.
Bootstrap support for H2QWY1 as seed ortholog is 100%.

Group of orthologs #344. Best score 385 bits
Score difference with first non-orthologous sequence - P.jiroveci:385 P.troglodytes:385

L0PGC4              	100.00%		G2HE55              	100.00%
Bootstrap support for L0PGC4 as seed ortholog is 100%.
Bootstrap support for G2HE55 as seed ortholog is 100%.

Group of orthologs #345. Best score 385 bits
Score difference with first non-orthologous sequence - P.jiroveci:385 P.troglodytes:385

L0PAI0              	100.00%		H2R1T4              	100.00%
Bootstrap support for L0PAI0 as seed ortholog is 100%.
Bootstrap support for H2R1T4 as seed ortholog is 100%.

Group of orthologs #346. Best score 384 bits
Score difference with first non-orthologous sequence - P.jiroveci:384 P.troglodytes:292

L0PBI2              	100.00%		H2R3Q5              	100.00%
Bootstrap support for L0PBI2 as seed ortholog is 100%.
Bootstrap support for H2R3Q5 as seed ortholog is 100%.

Group of orthologs #347. Best score 383 bits
Score difference with first non-orthologous sequence - P.jiroveci:383 P.troglodytes:306

L0PG01              	100.00%		H2QDP0              	100.00%
L0P7J0              	81.71%		H2QAS4              	29.02%
Bootstrap support for L0PG01 as seed ortholog is 100%.
Bootstrap support for H2QDP0 as seed ortholog is 100%.

Group of orthologs #348. Best score 383 bits
Score difference with first non-orthologous sequence - P.jiroveci:289 P.troglodytes:240

L0P7Z7              	100.00%		H2QBV7              	100.00%
                    	       		Q5IS43              	100.00%
Bootstrap support for L0P7Z7 as seed ortholog is 100%.
Bootstrap support for H2QBV7 as seed ortholog is 100%.
Bootstrap support for Q5IS43 as seed ortholog is 100%.

Group of orthologs #349. Best score 383 bits
Score difference with first non-orthologous sequence - P.jiroveci:220 P.troglodytes:71

L0P9Z0              	100.00%		H2QLB4              	100.00%
                    	       		H2RA86              	61.34%
Bootstrap support for L0P9Z0 as seed ortholog is 100%.
Bootstrap support for H2QLB4 as seed ortholog is 97%.

Group of orthologs #350. Best score 381 bits
Score difference with first non-orthologous sequence - P.jiroveci:381 P.troglodytes:381

L0PDW0              	100.00%		H2QBU9              	100.00%
Bootstrap support for L0PDW0 as seed ortholog is 100%.
Bootstrap support for H2QBU9 as seed ortholog is 100%.

Group of orthologs #351. Best score 381 bits
Score difference with first non-orthologous sequence - P.jiroveci:381 P.troglodytes:191

L0PE19              	100.00%		H2QUR2              	100.00%
Bootstrap support for L0PE19 as seed ortholog is 100%.
Bootstrap support for H2QUR2 as seed ortholog is 100%.

Group of orthologs #352. Best score 380 bits
Score difference with first non-orthologous sequence - P.jiroveci:181 P.troglodytes:380

L0PBH6              	100.00%		H2Q1L1              	100.00%
                    	       		H2Q113              	46.30%
                    	       		H2QMJ4              	42.90%
Bootstrap support for L0PBH6 as seed ortholog is 100%.
Bootstrap support for H2Q1L1 as seed ortholog is 100%.

Group of orthologs #353. Best score 380 bits
Score difference with first non-orthologous sequence - P.jiroveci:380 P.troglodytes:380

L0PAH9              	100.00%		H2QLB3              	100.00%
L0PAZ7              	31.53%		
Bootstrap support for L0PAH9 as seed ortholog is 100%.
Bootstrap support for H2QLB3 as seed ortholog is 100%.

Group of orthologs #354. Best score 380 bits
Score difference with first non-orthologous sequence - P.jiroveci:307 P.troglodytes:302

L0P7T8              	100.00%		H2QP80              	100.00%
Bootstrap support for L0P7T8 as seed ortholog is 100%.
Bootstrap support for H2QP80 as seed ortholog is 100%.

Group of orthologs #355. Best score 380 bits
Score difference with first non-orthologous sequence - P.jiroveci:380 P.troglodytes:380

L0P6U2              	100.00%		H2QR31              	100.00%
Bootstrap support for L0P6U2 as seed ortholog is 100%.
Bootstrap support for H2QR31 as seed ortholog is 100%.

Group of orthologs #356. Best score 379 bits
Score difference with first non-orthologous sequence - P.jiroveci:379 P.troglodytes:379

L0P8A6              	100.00%		H2QBU7              	100.00%
Bootstrap support for L0P8A6 as seed ortholog is 100%.
Bootstrap support for H2QBU7 as seed ortholog is 100%.

Group of orthologs #357. Best score 379 bits
Score difference with first non-orthologous sequence - P.jiroveci:379 P.troglodytes:379

L0P9U8              	100.00%		H2QF35              	100.00%
Bootstrap support for L0P9U8 as seed ortholog is 100%.
Bootstrap support for H2QF35 as seed ortholog is 100%.

Group of orthologs #358. Best score 378 bits
Score difference with first non-orthologous sequence - P.jiroveci:378 P.troglodytes:378

L0PA23              	100.00%		H2PZ82              	100.00%
Bootstrap support for L0PA23 as seed ortholog is 100%.
Bootstrap support for H2PZ82 as seed ortholog is 100%.

Group of orthologs #359. Best score 378 bits
Score difference with first non-orthologous sequence - P.jiroveci:378 P.troglodytes:378

L0P9B4              	100.00%		H2QHW9              	100.00%
Bootstrap support for L0P9B4 as seed ortholog is 100%.
Bootstrap support for H2QHW9 as seed ortholog is 100%.

Group of orthologs #360. Best score 377 bits
Score difference with first non-orthologous sequence - P.jiroveci:377 P.troglodytes:377

L0PFQ8              	100.00%		H2QGB6              	100.00%
Bootstrap support for L0PFQ8 as seed ortholog is 100%.
Bootstrap support for H2QGB6 as seed ortholog is 100%.

Group of orthologs #361. Best score 376 bits
Score difference with first non-orthologous sequence - P.jiroveci:232 P.troglodytes:261

L0PBY2              	100.00%		H2R518              	100.00%
                    	       		H2QMJ6              	22.50%
Bootstrap support for L0PBY2 as seed ortholog is 100%.
Bootstrap support for H2R518 as seed ortholog is 100%.

Group of orthologs #362. Best score 376 bits
Score difference with first non-orthologous sequence - P.jiroveci:376 P.troglodytes:255

L0PEI4              	100.00%		H2Q4H1              	100.00%
Bootstrap support for L0PEI4 as seed ortholog is 100%.
Bootstrap support for H2Q4H1 as seed ortholog is 100%.

Group of orthologs #363. Best score 376 bits
Score difference with first non-orthologous sequence - P.jiroveci:376 P.troglodytes:31

L0P9Y8              	100.00%		H2QY80              	100.00%
Bootstrap support for L0P9Y8 as seed ortholog is 100%.
Bootstrap support for H2QY80 as seed ortholog is 78%.

Group of orthologs #364. Best score 375 bits
Score difference with first non-orthologous sequence - P.jiroveci:21 P.troglodytes:94

L0PCW4              	100.00%		H2R4B7              	100.00%
                    	       		H2RA15              	100.00%
                    	       		H2QZ44              	38.13%
Bootstrap support for L0PCW4 as seed ortholog is 76%.
Bootstrap support for H2R4B7 as seed ortholog is 99%.
Bootstrap support for H2RA15 as seed ortholog is 99%.

Group of orthologs #365. Best score 375 bits
Score difference with first non-orthologous sequence - P.jiroveci:375 P.troglodytes:86

L0PFY3              	100.00%		H2Q441              	100.00%
Bootstrap support for L0PFY3 as seed ortholog is 100%.
Bootstrap support for H2Q441 as seed ortholog is 95%.

Group of orthologs #366. Best score 374 bits
Score difference with first non-orthologous sequence - P.jiroveci:374 P.troglodytes:266

L0PDQ3              	100.00%		H2QPR6              	100.00%
                    	       		H2QS65              	68.28%
Bootstrap support for L0PDQ3 as seed ortholog is 100%.
Bootstrap support for H2QPR6 as seed ortholog is 100%.

Group of orthologs #367. Best score 374 bits
Score difference with first non-orthologous sequence - P.jiroveci:374 P.troglodytes:304

L0P8G8              	100.00%		H2QQY8              	100.00%
Bootstrap support for L0P8G8 as seed ortholog is 100%.
Bootstrap support for H2QQY8 as seed ortholog is 100%.

Group of orthologs #368. Best score 374 bits
Score difference with first non-orthologous sequence - P.jiroveci:374 P.troglodytes:204

L0PCW8              	100.00%		H2QTD5              	100.00%
Bootstrap support for L0PCW8 as seed ortholog is 100%.
Bootstrap support for H2QTD5 as seed ortholog is 99%.

Group of orthologs #369. Best score 373 bits
Score difference with first non-orthologous sequence - P.jiroveci:373 P.troglodytes:264

L0P7P4              	100.00%		H2Q7E8              	100.00%
Bootstrap support for L0P7P4 as seed ortholog is 100%.
Bootstrap support for H2Q7E8 as seed ortholog is 100%.

Group of orthologs #370. Best score 371 bits
Score difference with first non-orthologous sequence - P.jiroveci:371 P.troglodytes:28

L0PH29              	100.00%		H2Q9K7              	100.00%
                    	       		H2RAT8              	60.80%
                    	       		H2QEV4              	20.40%
Bootstrap support for L0PH29 as seed ortholog is 100%.
Bootstrap support for H2Q9K7 as seed ortholog is 78%.

Group of orthologs #371. Best score 371 bits
Score difference with first non-orthologous sequence - P.jiroveci:371 P.troglodytes:371

L0PDI1              	100.00%		H2R7P1              	100.00%
Bootstrap support for L0PDI1 as seed ortholog is 100%.
Bootstrap support for H2R7P1 as seed ortholog is 100%.

Group of orthologs #372. Best score 370 bits
Score difference with first non-orthologous sequence - P.jiroveci:370 P.troglodytes:370

L0PC90              	100.00%		H2PZY7              	100.00%
Bootstrap support for L0PC90 as seed ortholog is 100%.
Bootstrap support for H2PZY7 as seed ortholog is 100%.

Group of orthologs #373. Best score 368 bits
Score difference with first non-orthologous sequence - P.jiroveci:368 P.troglodytes:309

L0PEX9              	100.00%		H2PYQ4              	100.00%
                    	       		H2QTE5              	70.44%
Bootstrap support for L0PEX9 as seed ortholog is 100%.
Bootstrap support for H2PYQ4 as seed ortholog is 100%.

Group of orthologs #374. Best score 368 bits
Score difference with first non-orthologous sequence - P.jiroveci:368 P.troglodytes:142

L0PEJ3              	100.00%		H2QP26              	100.00%
Bootstrap support for L0PEJ3 as seed ortholog is 100%.
Bootstrap support for H2QP26 as seed ortholog is 99%.

Group of orthologs #375. Best score 368 bits
Score difference with first non-orthologous sequence - P.jiroveci:201 P.troglodytes:277

L0PAU1              	100.00%		H2R8T9              	100.00%
Bootstrap support for L0PAU1 as seed ortholog is 99%.
Bootstrap support for H2R8T9 as seed ortholog is 100%.

Group of orthologs #376. Best score 367 bits
Score difference with first non-orthologous sequence - P.jiroveci:367 P.troglodytes:284

L0PDV0              	100.00%		H2PZW0              	100.00%
Bootstrap support for L0PDV0 as seed ortholog is 100%.
Bootstrap support for H2PZW0 as seed ortholog is 100%.

Group of orthologs #377. Best score 367 bits
Score difference with first non-orthologous sequence - P.jiroveci:367 P.troglodytes:301

L0PIR9              	100.00%		H2Q7W2              	100.00%
Bootstrap support for L0PIR9 as seed ortholog is 100%.
Bootstrap support for H2Q7W2 as seed ortholog is 100%.

Group of orthologs #378. Best score 366 bits
Score difference with first non-orthologous sequence - P.jiroveci:366 P.troglodytes:173

L0P7X9              	100.00%		H2R124              	100.00%
L0PBE2              	80.81%		H2QIW2              	38.75%
                    	       		H2QIL5              	9.10%
                    	       		Q5IS50              	5.20%
Bootstrap support for L0P7X9 as seed ortholog is 100%.
Bootstrap support for H2R124 as seed ortholog is 99%.

Group of orthologs #379. Best score 366 bits
Score difference with first non-orthologous sequence - P.jiroveci:237 P.troglodytes:181

L0PAY5              	100.00%		G2HDZ1              	100.00%
Bootstrap support for L0PAY5 as seed ortholog is 100%.
Bootstrap support for G2HDZ1 as seed ortholog is 100%.

Group of orthologs #380. Best score 366 bits
Score difference with first non-orthologous sequence - P.jiroveci:366 P.troglodytes:366

L0P9K9              	100.00%		H2QCL2              	100.00%
Bootstrap support for L0P9K9 as seed ortholog is 100%.
Bootstrap support for H2QCL2 as seed ortholog is 100%.

Group of orthologs #381. Best score 366 bits
Score difference with first non-orthologous sequence - P.jiroveci:366 P.troglodytes:110

L0PBA8              	100.00%		H2QLI6              	100.00%
Bootstrap support for L0PBA8 as seed ortholog is 100%.
Bootstrap support for H2QLI6 as seed ortholog is 99%.

Group of orthologs #382. Best score 365 bits
Score difference with first non-orthologous sequence - P.jiroveci:365 P.troglodytes:365

L0PAC7              	100.00%		H2Q4U0              	100.00%
Bootstrap support for L0PAC7 as seed ortholog is 100%.
Bootstrap support for H2Q4U0 as seed ortholog is 100%.

Group of orthologs #383. Best score 365 bits
Score difference with first non-orthologous sequence - P.jiroveci:365 P.troglodytes:365

L0PCB2              	100.00%		H2Q6I1              	100.00%
Bootstrap support for L0PCB2 as seed ortholog is 100%.
Bootstrap support for H2Q6I1 as seed ortholog is 100%.

Group of orthologs #384. Best score 364 bits
Score difference with first non-orthologous sequence - P.jiroveci:364 P.troglodytes:364

L0PF21              	100.00%		A5A6K8              	100.00%
Bootstrap support for L0PF21 as seed ortholog is 100%.
Bootstrap support for A5A6K8 as seed ortholog is 100%.

Group of orthologs #385. Best score 364 bits
Score difference with first non-orthologous sequence - P.jiroveci:364 P.troglodytes:364

L0PES3              	100.00%		H2R3N9              	100.00%
Bootstrap support for L0PES3 as seed ortholog is 100%.
Bootstrap support for H2R3N9 as seed ortholog is 100%.

Group of orthologs #386. Best score 363 bits
Score difference with first non-orthologous sequence - P.jiroveci:363 P.troglodytes:363

L0PBA9              	100.00%		H2QB17              	100.00%
                    	       		H2QZJ9              	44.72%
Bootstrap support for L0PBA9 as seed ortholog is 100%.
Bootstrap support for H2QB17 as seed ortholog is 100%.

Group of orthologs #387. Best score 362 bits
Score difference with first non-orthologous sequence - P.jiroveci:112 P.troglodytes:362

L0PD82              	100.00%		H2QMM2              	100.00%
Bootstrap support for L0PD82 as seed ortholog is 99%.
Bootstrap support for H2QMM2 as seed ortholog is 100%.

Group of orthologs #388. Best score 360 bits
Score difference with first non-orthologous sequence - P.jiroveci:360 P.troglodytes:257

L0PDF2              	100.00%		H2QX79              	100.00%
Bootstrap support for L0PDF2 as seed ortholog is 100%.
Bootstrap support for H2QX79 as seed ortholog is 100%.

Group of orthologs #389. Best score 359 bits
Score difference with first non-orthologous sequence - P.jiroveci:359 P.troglodytes:238

L0PD17              	100.00%		H2QSX7              	100.00%
                    	       		H2QLX0              	41.73%
Bootstrap support for L0PD17 as seed ortholog is 100%.
Bootstrap support for H2QSX7 as seed ortholog is 100%.

Group of orthologs #390. Best score 359 bits
Score difference with first non-orthologous sequence - P.jiroveci:359 P.troglodytes:150

L0PD18              	100.00%		H2QS96              	100.00%
Bootstrap support for L0PD18 as seed ortholog is 100%.
Bootstrap support for H2QS96 as seed ortholog is 99%.

Group of orthologs #391. Best score 359 bits
Score difference with first non-orthologous sequence - P.jiroveci:137 P.troglodytes:110

L0PF10              	100.00%		H2QR08              	100.00%
Bootstrap support for L0PF10 as seed ortholog is 99%.
Bootstrap support for H2QR08 as seed ortholog is 99%.

Group of orthologs #392. Best score 358 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 P.troglodytes:101

L0PBU4              	100.00%		H2Q6B6              	100.00%
                    	       		H2R425              	58.57%
                    	       		H2QIT3              	53.88%
Bootstrap support for L0PBU4 as seed ortholog is 99%.
Bootstrap support for H2Q6B6 as seed ortholog is 99%.

Group of orthologs #393. Best score 356 bits
Score difference with first non-orthologous sequence - P.jiroveci:356 P.troglodytes:356

L0PGF5              	100.00%		H2QJF1              	100.00%
Bootstrap support for L0PGF5 as seed ortholog is 100%.
Bootstrap support for H2QJF1 as seed ortholog is 100%.

Group of orthologs #394. Best score 354 bits
Score difference with first non-orthologous sequence - P.jiroveci:354 P.troglodytes:354

L0PFJ8              	100.00%		H2QZD0              	100.00%
                    	       		Q5XUN4              	78.71%
                    	       		H2RBQ9              	47.29%
                    	       		H2Q0X2              	42.94%
Bootstrap support for L0PFJ8 as seed ortholog is 100%.
Bootstrap support for H2QZD0 as seed ortholog is 100%.

Group of orthologs #395. Best score 352 bits
Score difference with first non-orthologous sequence - P.jiroveci:179 P.troglodytes:352

L0P8U1              	100.00%		H2R2U5              	100.00%
Bootstrap support for L0P8U1 as seed ortholog is 99%.
Bootstrap support for H2R2U5 as seed ortholog is 100%.

Group of orthologs #396. Best score 351 bits
Score difference with first non-orthologous sequence - P.jiroveci:351 P.troglodytes:59

L0PB24              	100.00%		H2Q581              	100.00%
Bootstrap support for L0PB24 as seed ortholog is 100%.
Bootstrap support for H2Q581 as seed ortholog is 95%.

Group of orthologs #397. Best score 351 bits
Score difference with first non-orthologous sequence - P.jiroveci:88 P.troglodytes:72

L0PBP2              	100.00%		H2R3U6              	100.00%
Bootstrap support for L0PBP2 as seed ortholog is 92%.
Bootstrap support for H2R3U6 as seed ortholog is 89%.

Group of orthologs #398. Best score 350 bits
Score difference with first non-orthologous sequence - P.jiroveci:350 P.troglodytes:350

L0PBP4              	100.00%		H2Q8T2              	100.00%
Bootstrap support for L0PBP4 as seed ortholog is 100%.
Bootstrap support for H2Q8T2 as seed ortholog is 100%.

Group of orthologs #399. Best score 350 bits
Score difference with first non-orthologous sequence - P.jiroveci:350 P.troglodytes:350

L0P9B6              	100.00%		H2QBG8              	100.00%
Bootstrap support for L0P9B6 as seed ortholog is 100%.
Bootstrap support for H2QBG8 as seed ortholog is 100%.

Group of orthologs #400. Best score 350 bits
Score difference with first non-orthologous sequence - P.jiroveci:350 P.troglodytes:350

L0PBX2              	100.00%		H2QX34              	100.00%
Bootstrap support for L0PBX2 as seed ortholog is 100%.
Bootstrap support for H2QX34 as seed ortholog is 100%.

Group of orthologs #401. Best score 350 bits
Score difference with first non-orthologous sequence - P.jiroveci:350 P.troglodytes:281

L0PBQ1              	100.00%		H2R079              	100.00%
Bootstrap support for L0PBQ1 as seed ortholog is 100%.
Bootstrap support for H2R079 as seed ortholog is 100%.

Group of orthologs #402. Best score 347 bits
Score difference with first non-orthologous sequence - P.jiroveci:347 P.troglodytes:347

L0PD02              	100.00%		H2PY56              	100.00%
Bootstrap support for L0PD02 as seed ortholog is 100%.
Bootstrap support for H2PY56 as seed ortholog is 100%.

Group of orthologs #403. Best score 346 bits
Score difference with first non-orthologous sequence - P.jiroveci:290 P.troglodytes:220

L0PG24              	100.00%		H2Q176              	100.00%
Bootstrap support for L0PG24 as seed ortholog is 100%.
Bootstrap support for H2Q176 as seed ortholog is 99%.

Group of orthologs #404. Best score 346 bits
Score difference with first non-orthologous sequence - P.jiroveci:346 P.troglodytes:346

L0PED5              	100.00%		H2R0Q8              	100.00%
Bootstrap support for L0PED5 as seed ortholog is 100%.
Bootstrap support for H2R0Q8 as seed ortholog is 100%.

Group of orthologs #405. Best score 346 bits
Score difference with first non-orthologous sequence - P.jiroveci:346 P.troglodytes:346

L0PF74              	100.00%		H2RA81              	100.00%
Bootstrap support for L0PF74 as seed ortholog is 100%.
Bootstrap support for H2RA81 as seed ortholog is 100%.

Group of orthologs #406. Best score 345 bits
Score difference with first non-orthologous sequence - P.jiroveci:174 P.troglodytes:119

L0PCJ5              	100.00%		H2PYU8              	100.00%
Bootstrap support for L0PCJ5 as seed ortholog is 99%.
Bootstrap support for H2PYU8 as seed ortholog is 99%.

Group of orthologs #407. Best score 345 bits
Score difference with first non-orthologous sequence - P.jiroveci:345 P.troglodytes:253

L0PBQ9              	100.00%		H2QHN7              	100.00%
Bootstrap support for L0PBQ9 as seed ortholog is 100%.
Bootstrap support for H2QHN7 as seed ortholog is 100%.

Group of orthologs #408. Best score 345 bits
Score difference with first non-orthologous sequence - P.jiroveci:345 P.troglodytes:143

L0PEG2              	100.00%		H2QV72              	100.00%
Bootstrap support for L0PEG2 as seed ortholog is 100%.
Bootstrap support for H2QV72 as seed ortholog is 99%.

Group of orthologs #409. Best score 345 bits
Score difference with first non-orthologous sequence - P.jiroveci:209 P.troglodytes:181

L0PEF1              	100.00%		H2R0W1              	100.00%
Bootstrap support for L0PEF1 as seed ortholog is 99%.
Bootstrap support for H2R0W1 as seed ortholog is 99%.

Group of orthologs #410. Best score 344 bits
Score difference with first non-orthologous sequence - P.jiroveci:217 P.troglodytes:344

L0P9F3              	100.00%		H2Q178              	100.00%
                    	       		H2Q420              	13.94%
Bootstrap support for L0P9F3 as seed ortholog is 99%.
Bootstrap support for H2Q178 as seed ortholog is 100%.

Group of orthologs #411. Best score 343 bits
Score difference with first non-orthologous sequence - P.jiroveci:343 P.troglodytes:343

L0PBN2              	100.00%		H2QR97              	100.00%
Bootstrap support for L0PBN2 as seed ortholog is 100%.
Bootstrap support for H2QR97 as seed ortholog is 100%.

Group of orthologs #412. Best score 343 bits
Score difference with first non-orthologous sequence - P.jiroveci:243 P.troglodytes:343

L0P8W4              	100.00%		H2R3I4              	100.00%
Bootstrap support for L0P8W4 as seed ortholog is 100%.
Bootstrap support for H2R3I4 as seed ortholog is 100%.

Group of orthologs #413. Best score 342 bits
Score difference with first non-orthologous sequence - P.jiroveci:342 P.troglodytes:342

L0PA00              	100.00%		H2Q3U7              	100.00%
Bootstrap support for L0PA00 as seed ortholog is 100%.
Bootstrap support for H2Q3U7 as seed ortholog is 100%.

Group of orthologs #414. Best score 342 bits
Score difference with first non-orthologous sequence - P.jiroveci:342 P.troglodytes:342

L0PD99              	100.00%		H2QMZ9              	100.00%
Bootstrap support for L0PD99 as seed ortholog is 100%.
Bootstrap support for H2QMZ9 as seed ortholog is 100%.

Group of orthologs #415. Best score 341 bits
Score difference with first non-orthologous sequence - P.jiroveci:341 P.troglodytes:52

L0PBM5              	100.00%		H2QYP9              	100.00%
                    	       		H2Q7B1              	33.69%
                    	       		H2QVS8              	31.80%
Bootstrap support for L0PBM5 as seed ortholog is 100%.
Bootstrap support for H2QYP9 as seed ortholog is 80%.

Group of orthologs #416. Best score 341 bits
Score difference with first non-orthologous sequence - P.jiroveci:341 P.troglodytes:341

L0PF30              	100.00%		H2Q204              	100.00%
Bootstrap support for L0PF30 as seed ortholog is 100%.
Bootstrap support for H2Q204 as seed ortholog is 100%.

Group of orthologs #417. Best score 340 bits
Score difference with first non-orthologous sequence - P.jiroveci:211 P.troglodytes:340

L0PAW2              	100.00%		H2R2E7              	100.00%
Bootstrap support for L0PAW2 as seed ortholog is 99%.
Bootstrap support for H2R2E7 as seed ortholog is 100%.

Group of orthologs #418. Best score 339 bits
Score difference with first non-orthologous sequence - P.jiroveci:339 P.troglodytes:339

L0P912              	100.00%		H2QX54              	100.00%
L0P908              	89.38%		
Bootstrap support for L0P912 as seed ortholog is 100%.
Bootstrap support for H2QX54 as seed ortholog is 100%.

Group of orthologs #419. Best score 339 bits
Score difference with first non-orthologous sequence - P.jiroveci:339 P.troglodytes:339

L0PB54              	100.00%		H2R943              	100.00%
                    	       		H2RHA6              	65.22%
Bootstrap support for L0PB54 as seed ortholog is 100%.
Bootstrap support for H2R943 as seed ortholog is 100%.

Group of orthologs #420. Best score 339 bits
Score difference with first non-orthologous sequence - P.jiroveci:339 P.troglodytes:249

L0PEF5              	100.00%		H2Q775              	100.00%
Bootstrap support for L0PEF5 as seed ortholog is 100%.
Bootstrap support for H2Q775 as seed ortholog is 100%.

Group of orthologs #421. Best score 339 bits
Score difference with first non-orthologous sequence - P.jiroveci:339 P.troglodytes:64

L0PCQ8              	100.00%		H2QJU4              	100.00%
Bootstrap support for L0PCQ8 as seed ortholog is 100%.
Bootstrap support for H2QJU4 as seed ortholog is 98%.

Group of orthologs #422. Best score 338 bits
Score difference with first non-orthologous sequence - P.jiroveci:338 P.troglodytes:338

L0P8R8              	100.00%		H2QNK8              	100.00%
Bootstrap support for L0P8R8 as seed ortholog is 100%.
Bootstrap support for H2QNK8 as seed ortholog is 100%.

Group of orthologs #423. Best score 337 bits
Score difference with first non-orthologous sequence - P.jiroveci:337 P.troglodytes:337

L0P7R5              	100.00%		G2HF49              	100.00%
Bootstrap support for L0P7R5 as seed ortholog is 100%.
Bootstrap support for G2HF49 as seed ortholog is 100%.

Group of orthologs #424. Best score 337 bits
Score difference with first non-orthologous sequence - P.jiroveci:337 P.troglodytes:337

L0PF46              	100.00%		G2HJ63              	100.00%
Bootstrap support for L0PF46 as seed ortholog is 100%.
Bootstrap support for G2HJ63 as seed ortholog is 100%.

Group of orthologs #425. Best score 337 bits
Score difference with first non-orthologous sequence - P.jiroveci:337 P.troglodytes:337

L0P9K4              	100.00%		H2R8C3              	100.00%
Bootstrap support for L0P9K4 as seed ortholog is 100%.
Bootstrap support for H2R8C3 as seed ortholog is 100%.

Group of orthologs #426. Best score 336 bits
Score difference with first non-orthologous sequence - P.jiroveci:336 P.troglodytes:336

L0P8R5              	100.00%		H2QWK6              	100.00%
Bootstrap support for L0P8R5 as seed ortholog is 100%.
Bootstrap support for H2QWK6 as seed ortholog is 100%.

Group of orthologs #427. Best score 334 bits
Score difference with first non-orthologous sequence - P.jiroveci:334 P.troglodytes:334

L0PAL9              	100.00%		H2Q8S6              	100.00%
L0PBY7              	40.90%		H2QHX6              	66.77%
Bootstrap support for L0PAL9 as seed ortholog is 100%.
Bootstrap support for H2Q8S6 as seed ortholog is 100%.

Group of orthologs #428. Best score 334 bits
Score difference with first non-orthologous sequence - P.jiroveci:334 P.troglodytes:334

L0PA42              	100.00%		H2PZE6              	100.00%
Bootstrap support for L0PA42 as seed ortholog is 100%.
Bootstrap support for H2PZE6 as seed ortholog is 100%.

Group of orthologs #429. Best score 333 bits
Score difference with first non-orthologous sequence - P.jiroveci:333 P.troglodytes:333

L0PBD0              	100.00%		H2R7A6              	100.00%
                    	       		H2Q9A0              	38.60%
Bootstrap support for L0PBD0 as seed ortholog is 100%.
Bootstrap support for H2R7A6 as seed ortholog is 100%.

Group of orthologs #430. Best score 333 bits
Score difference with first non-orthologous sequence - P.jiroveci:333 P.troglodytes:333

L0PBZ7              	100.00%		H2R208              	100.00%
Bootstrap support for L0PBZ7 as seed ortholog is 100%.
Bootstrap support for H2R208 as seed ortholog is 100%.

Group of orthologs #431. Best score 332 bits
Score difference with first non-orthologous sequence - P.jiroveci:332 P.troglodytes:332

L0P7N5              	100.00%		H2R9L5              	100.00%
                    	       		H2QA78              	36.16%
Bootstrap support for L0P7N5 as seed ortholog is 100%.
Bootstrap support for H2R9L5 as seed ortholog is 100%.

Group of orthologs #432. Best score 332 bits
Score difference with first non-orthologous sequence - P.jiroveci:285 P.troglodytes:332

L0PC30              	100.00%		H2Q4H3              	100.00%
Bootstrap support for L0PC30 as seed ortholog is 100%.
Bootstrap support for H2Q4H3 as seed ortholog is 100%.

Group of orthologs #433. Best score 331 bits
Score difference with first non-orthologous sequence - P.jiroveci:331 P.troglodytes:331

L0PBC5              	100.00%		H2QWD7              	100.00%
                    	       		H2QBB6              	33.77%
Bootstrap support for L0PBC5 as seed ortholog is 100%.
Bootstrap support for H2QWD7 as seed ortholog is 100%.

Group of orthologs #434. Best score 331 bits
Score difference with first non-orthologous sequence - P.jiroveci:237 P.troglodytes:331

L0PB21              	100.00%		P60024              	100.00%
                    	       		H2QFK3              	60.65%
Bootstrap support for L0PB21 as seed ortholog is 100%.
Bootstrap support for P60024 as seed ortholog is 100%.

Group of orthologs #435. Best score 331 bits
Score difference with first non-orthologous sequence - P.jiroveci:331 P.troglodytes:331

L0PF92              	100.00%		H2Q7L6              	100.00%
Bootstrap support for L0PF92 as seed ortholog is 100%.
Bootstrap support for H2Q7L6 as seed ortholog is 100%.

Group of orthologs #436. Best score 331 bits
Score difference with first non-orthologous sequence - P.jiroveci:331 P.troglodytes:331

L0PFI2              	100.00%		H2Q8H4              	100.00%
Bootstrap support for L0PFI2 as seed ortholog is 100%.
Bootstrap support for H2Q8H4 as seed ortholog is 100%.

Group of orthologs #437. Best score 331 bits
Score difference with first non-orthologous sequence - P.jiroveci:248 P.troglodytes:331

L0P8N0              	100.00%		H2QJH1              	100.00%
Bootstrap support for L0P8N0 as seed ortholog is 100%.
Bootstrap support for H2QJH1 as seed ortholog is 100%.

Group of orthologs #438. Best score 331 bits
Score difference with first non-orthologous sequence - P.jiroveci:331 P.troglodytes:331

L0PBT3              	100.00%		H2R168              	100.00%
Bootstrap support for L0PBT3 as seed ortholog is 100%.
Bootstrap support for H2R168 as seed ortholog is 100%.

Group of orthologs #439. Best score 330 bits
Score difference with first non-orthologous sequence - P.jiroveci:330 P.troglodytes:330

L0PHL3              	100.00%		H2QXN5              	100.00%
Bootstrap support for L0PHL3 as seed ortholog is 100%.
Bootstrap support for H2QXN5 as seed ortholog is 100%.

Group of orthologs #440. Best score 328 bits
Score difference with first non-orthologous sequence - P.jiroveci:328 P.troglodytes:105

L0P891              	100.00%		H2Q6Z3              	100.00%
Bootstrap support for L0P891 as seed ortholog is 100%.
Bootstrap support for H2Q6Z3 as seed ortholog is 99%.

Group of orthologs #441. Best score 328 bits
Score difference with first non-orthologous sequence - P.jiroveci:328 P.troglodytes:328

L0P8J2              	100.00%		H2QQV5              	100.00%
Bootstrap support for L0P8J2 as seed ortholog is 100%.
Bootstrap support for H2QQV5 as seed ortholog is 100%.

Group of orthologs #442. Best score 327 bits
Score difference with first non-orthologous sequence - P.jiroveci:327 P.troglodytes:327

L0PEM6              	100.00%		H2Q5X0              	100.00%
                    	       		H2QL64              	69.71%
                    	       		H2Q1I8              	53.18%
Bootstrap support for L0PEM6 as seed ortholog is 100%.
Bootstrap support for H2Q5X0 as seed ortholog is 100%.

Group of orthologs #443. Best score 327 bits
Score difference with first non-orthologous sequence - P.jiroveci:327 P.troglodytes:327

L0P8N3              	100.00%		G2HF36              	100.00%
Bootstrap support for L0P8N3 as seed ortholog is 100%.
Bootstrap support for G2HF36 as seed ortholog is 100%.

Group of orthologs #444. Best score 327 bits
Score difference with first non-orthologous sequence - P.jiroveci:327 P.troglodytes:53

L0PA09              	100.00%		H2Q4P9              	100.00%
Bootstrap support for L0PA09 as seed ortholog is 100%.
Bootstrap support for H2Q4P9 as seed ortholog is 93%.

Group of orthologs #445. Best score 327 bits
Score difference with first non-orthologous sequence - P.jiroveci:225 P.troglodytes:199

L0PBM6              	100.00%		H2Q8U7              	100.00%
Bootstrap support for L0PBM6 as seed ortholog is 99%.
Bootstrap support for H2Q8U7 as seed ortholog is 99%.

Group of orthologs #446. Best score 327 bits
Score difference with first non-orthologous sequence - P.jiroveci:327 P.troglodytes:219

L0PF71              	100.00%		H2QWZ3              	100.00%
Bootstrap support for L0PF71 as seed ortholog is 100%.
Bootstrap support for H2QWZ3 as seed ortholog is 100%.

Group of orthologs #447. Best score 326 bits
Score difference with first non-orthologous sequence - P.jiroveci:326 P.troglodytes:258

L0PB00              	100.00%		H2QQS6              	100.00%
Bootstrap support for L0PB00 as seed ortholog is 100%.
Bootstrap support for H2QQS6 as seed ortholog is 100%.

Group of orthologs #448. Best score 326 bits
Score difference with first non-orthologous sequence - P.jiroveci:326 P.troglodytes:269

L0PBD2              	100.00%		H2R0W9              	100.00%
Bootstrap support for L0PBD2 as seed ortholog is 100%.
Bootstrap support for H2R0W9 as seed ortholog is 100%.

Group of orthologs #449. Best score 325 bits
Score difference with first non-orthologous sequence - P.jiroveci:325 P.troglodytes:163

L0PC17              	100.00%		H2Q8M1              	100.00%
L0PD22              	51.57%		
Bootstrap support for L0PC17 as seed ortholog is 100%.
Bootstrap support for H2Q8M1 as seed ortholog is 100%.

Group of orthologs #450. Best score 325 bits
Score difference with first non-orthologous sequence - P.jiroveci:325 P.troglodytes:325

L0PCY9              	100.00%		H2QZJ2              	100.00%
Bootstrap support for L0PCY9 as seed ortholog is 100%.
Bootstrap support for H2QZJ2 as seed ortholog is 100%.

Group of orthologs #451. Best score 323 bits
Score difference with first non-orthologous sequence - P.jiroveci:323 P.troglodytes:323

L0PCG4              	100.00%		H2QYT0              	100.00%
                    	       		H2RB54              	94.86%
                    	       		Q6GVM7              	86.92%
                    	       		Q861U9              	85.05%
Bootstrap support for L0PCG4 as seed ortholog is 100%.
Bootstrap support for H2QYT0 as seed ortholog is 100%.

Group of orthologs #452. Best score 323 bits
Score difference with first non-orthologous sequence - P.jiroveci:323 P.troglodytes:323

L0PEZ2              	100.00%		H2Q2V7              	100.00%
L0PH30              	85.02%		
Bootstrap support for L0PEZ2 as seed ortholog is 100%.
Bootstrap support for H2Q2V7 as seed ortholog is 100%.

Group of orthologs #453. Best score 322 bits
Score difference with first non-orthologous sequence - P.jiroveci:322 P.troglodytes:209

L0PBS9              	100.00%		H2QH76              	100.00%
Bootstrap support for L0PBS9 as seed ortholog is 100%.
Bootstrap support for H2QH76 as seed ortholog is 100%.

Group of orthologs #454. Best score 320 bits
Score difference with first non-orthologous sequence - P.jiroveci:320 P.troglodytes:320

L0PAF9              	100.00%		H2Q3N7              	100.00%
Bootstrap support for L0PAF9 as seed ortholog is 100%.
Bootstrap support for H2Q3N7 as seed ortholog is 100%.

Group of orthologs #455. Best score 319 bits
Score difference with first non-orthologous sequence - P.jiroveci:319 P.troglodytes:319

L0P9G9              	100.00%		H2Q893              	100.00%
Bootstrap support for L0P9G9 as seed ortholog is 100%.
Bootstrap support for H2Q893 as seed ortholog is 100%.

Group of orthologs #456. Best score 319 bits
Score difference with first non-orthologous sequence - P.jiroveci:319 P.troglodytes:319

L0PGL6              	100.00%		Q9GL72              	100.00%
Bootstrap support for L0PGL6 as seed ortholog is 100%.
Bootstrap support for Q9GL72 as seed ortholog is 100%.

Group of orthologs #457. Best score 318 bits
Score difference with first non-orthologous sequence - P.jiroveci:318 P.troglodytes:30

L0PGR0              	100.00%		H2QZ01              	100.00%
                    	       		H2QJI4              	57.80%
Bootstrap support for L0PGR0 as seed ortholog is 100%.
Bootstrap support for H2QZ01 as seed ortholog is 71%.
Alternative seed ortholog is H2R189 (30 bits away from this cluster)

Group of orthologs #458. Best score 318 bits
Score difference with first non-orthologous sequence - P.jiroveci:318 P.troglodytes:318

L0P9X7              	100.00%		G2HDY3              	100.00%
Bootstrap support for L0P9X7 as seed ortholog is 100%.
Bootstrap support for G2HDY3 as seed ortholog is 100%.

Group of orthologs #459. Best score 318 bits
Score difference with first non-orthologous sequence - P.jiroveci:318 P.troglodytes:318

L0PCK3              	100.00%		G2HJD7              	100.00%
Bootstrap support for L0PCK3 as seed ortholog is 100%.
Bootstrap support for G2HJD7 as seed ortholog is 100%.

Group of orthologs #460. Best score 318 bits
Score difference with first non-orthologous sequence - P.jiroveci:318 P.troglodytes:318

L0PFC9              	100.00%		H2Q079              	100.00%
Bootstrap support for L0PFC9 as seed ortholog is 100%.
Bootstrap support for H2Q079 as seed ortholog is 100%.

Group of orthologs #461. Best score 317 bits
Score difference with first non-orthologous sequence - P.jiroveci:317 P.troglodytes:317

L0PBY3              	100.00%		H2R2D4              	100.00%
                    	       		H2RBY6              	32.92%
Bootstrap support for L0PBY3 as seed ortholog is 100%.
Bootstrap support for H2R2D4 as seed ortholog is 100%.

Group of orthologs #462. Best score 317 bits
Score difference with first non-orthologous sequence - P.jiroveci:317 P.troglodytes:317

L0PA65              	100.00%		G2HEY4              	100.00%
Bootstrap support for L0PA65 as seed ortholog is 100%.
Bootstrap support for G2HEY4 as seed ortholog is 100%.

Group of orthologs #463. Best score 317 bits
Score difference with first non-orthologous sequence - P.jiroveci:317 P.troglodytes:211

L0PFE9              	100.00%		H2Q432              	100.00%
Bootstrap support for L0PFE9 as seed ortholog is 100%.
Bootstrap support for H2Q432 as seed ortholog is 100%.

Group of orthologs #464. Best score 317 bits
Score difference with first non-orthologous sequence - P.jiroveci:317 P.troglodytes:238

L0PDL9              	100.00%		H2QBI1              	100.00%
Bootstrap support for L0PDL9 as seed ortholog is 100%.
Bootstrap support for H2QBI1 as seed ortholog is 100%.

Group of orthologs #465. Best score 316 bits
Score difference with first non-orthologous sequence - P.jiroveci:316 P.troglodytes:316

L0PD68              	100.00%		H2QKK7              	100.00%
Bootstrap support for L0PD68 as seed ortholog is 100%.
Bootstrap support for H2QKK7 as seed ortholog is 100%.

Group of orthologs #466. Best score 316 bits
Score difference with first non-orthologous sequence - P.jiroveci:316 P.troglodytes:316

L0PCU5              	100.00%		H2QL84              	100.00%
Bootstrap support for L0PCU5 as seed ortholog is 100%.
Bootstrap support for H2QL84 as seed ortholog is 100%.

Group of orthologs #467. Best score 315 bits
Score difference with first non-orthologous sequence - P.jiroveci:315 P.troglodytes:315

L0PAU5              	100.00%		H2R294              	100.00%
Bootstrap support for L0PAU5 as seed ortholog is 100%.
Bootstrap support for H2R294 as seed ortholog is 100%.

Group of orthologs #468. Best score 315 bits
Score difference with first non-orthologous sequence - P.jiroveci:315 P.troglodytes:223

L0PH80              	100.00%		H2R3H4              	100.00%
Bootstrap support for L0PH80 as seed ortholog is 100%.
Bootstrap support for H2R3H4 as seed ortholog is 100%.

Group of orthologs #469. Best score 314 bits
Score difference with first non-orthologous sequence - P.jiroveci:314 P.troglodytes:314

L0PA60              	100.00%		H2QH41              	100.00%
Bootstrap support for L0PA60 as seed ortholog is 100%.
Bootstrap support for H2QH41 as seed ortholog is 100%.

Group of orthologs #470. Best score 313 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 P.troglodytes:49

L0P6X2              	100.00%		H2PY98              	100.00%
Bootstrap support for L0P6X2 as seed ortholog is 100%.
Bootstrap support for H2PY98 as seed ortholog is 93%.

Group of orthologs #471. Best score 312 bits
Score difference with first non-orthologous sequence - P.jiroveci:312 P.troglodytes:312

L0PF98              	100.00%		H2Q3R2              	100.00%
                    	       		H2QLH9              	47.09%
Bootstrap support for L0PF98 as seed ortholog is 100%.
Bootstrap support for H2Q3R2 as seed ortholog is 100%.

Group of orthologs #472. Best score 312 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 P.troglodytes:312

L0PB70              	100.00%		H2QLT3              	100.00%
                    	       		H2QAI5              	20.43%
Bootstrap support for L0PB70 as seed ortholog is 98%.
Bootstrap support for H2QLT3 as seed ortholog is 100%.

Group of orthologs #473. Best score 311 bits
Score difference with first non-orthologous sequence - P.jiroveci:311 P.troglodytes:311

L0PC62              	100.00%		H2QMW3              	100.00%
Bootstrap support for L0PC62 as seed ortholog is 100%.
Bootstrap support for H2QMW3 as seed ortholog is 100%.

Group of orthologs #474. Best score 310 bits
Score difference with first non-orthologous sequence - P.jiroveci:310 P.troglodytes:310

L0PCV1              	100.00%		H2R9B8              	100.00%
Bootstrap support for L0PCV1 as seed ortholog is 100%.
Bootstrap support for H2R9B8 as seed ortholog is 100%.

Group of orthologs #475. Best score 309 bits
Score difference with first non-orthologous sequence - P.jiroveci:309 P.troglodytes:186

L0P983              	100.00%		H2Q4X5              	100.00%
Bootstrap support for L0P983 as seed ortholog is 100%.
Bootstrap support for H2Q4X5 as seed ortholog is 99%.

Group of orthologs #476. Best score 309 bits
Score difference with first non-orthologous sequence - P.jiroveci:309 P.troglodytes:309

L0P870              	100.00%		H2QE26              	100.00%
Bootstrap support for L0P870 as seed ortholog is 100%.
Bootstrap support for H2QE26 as seed ortholog is 100%.

Group of orthologs #477. Best score 309 bits
Score difference with first non-orthologous sequence - P.jiroveci:309 P.troglodytes:201

L0P865              	100.00%		H2QQZ4              	100.00%
Bootstrap support for L0P865 as seed ortholog is 100%.
Bootstrap support for H2QQZ4 as seed ortholog is 99%.

Group of orthologs #478. Best score 307 bits
Score difference with first non-orthologous sequence - P.jiroveci:307 P.troglodytes:307

L0PAP4              	100.00%		H2QV00              	100.00%
                    	       		H2QV01              	53.03%
Bootstrap support for L0PAP4 as seed ortholog is 100%.
Bootstrap support for H2QV00 as seed ortholog is 100%.

Group of orthologs #479. Best score 307 bits
Score difference with first non-orthologous sequence - P.jiroveci:307 P.troglodytes:230

L0PCT5              	100.00%		H2Q2T5              	100.00%
Bootstrap support for L0PCT5 as seed ortholog is 100%.
Bootstrap support for H2Q2T5 as seed ortholog is 99%.

Group of orthologs #480. Best score 307 bits
Score difference with first non-orthologous sequence - P.jiroveci:307 P.troglodytes:307

L0PHK3              	100.00%		H2QAJ3              	100.00%
Bootstrap support for L0PHK3 as seed ortholog is 100%.
Bootstrap support for H2QAJ3 as seed ortholog is 100%.

Group of orthologs #481. Best score 307 bits
Score difference with first non-orthologous sequence - P.jiroveci:307 P.troglodytes:93

L0PG34              	100.00%		H2QST6              	100.00%
Bootstrap support for L0PG34 as seed ortholog is 100%.
Bootstrap support for H2QST6 as seed ortholog is 99%.

Group of orthologs #482. Best score 306 bits
Score difference with first non-orthologous sequence - P.jiroveci:216 P.troglodytes:145

L0P966              	100.00%		H2Q761              	100.00%
Bootstrap support for L0P966 as seed ortholog is 100%.
Bootstrap support for H2Q761 as seed ortholog is 99%.

Group of orthologs #483. Best score 305 bits
Score difference with first non-orthologous sequence - P.jiroveci:305 P.troglodytes:58

L0P9S5              	100.00%		G2HI54              	100.00%
Bootstrap support for L0P9S5 as seed ortholog is 100%.
Bootstrap support for G2HI54 as seed ortholog is 99%.

Group of orthologs #484. Best score 304 bits
Score difference with first non-orthologous sequence - P.jiroveci:47 P.troglodytes:304

L0PD03              	100.00%		G2HHK9              	100.00%
Bootstrap support for L0PD03 as seed ortholog is 95%.
Bootstrap support for G2HHK9 as seed ortholog is 100%.

Group of orthologs #485. Best score 304 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 P.troglodytes:304

L0PA63              	100.00%		H2QHW0              	100.00%
Bootstrap support for L0PA63 as seed ortholog is 97%.
Bootstrap support for H2QHW0 as seed ortholog is 100%.

Group of orthologs #486. Best score 303 bits
Score difference with first non-orthologous sequence - P.jiroveci:303 P.troglodytes:303

L0PIV4              	100.00%		H2QBQ1              	100.00%
Bootstrap support for L0PIV4 as seed ortholog is 100%.
Bootstrap support for H2QBQ1 as seed ortholog is 100%.

Group of orthologs #487. Best score 302 bits
Score difference with first non-orthologous sequence - P.jiroveci:302 P.troglodytes:302

L0PAG0              	100.00%		H2Q886              	100.00%
                    	       		H2R6C7              	80.13%
Bootstrap support for L0PAG0 as seed ortholog is 100%.
Bootstrap support for H2Q886 as seed ortholog is 100%.

Group of orthologs #488. Best score 302 bits
Score difference with first non-orthologous sequence - P.jiroveci:302 P.troglodytes:302

L0PD41              	100.00%		H2QHQ7              	100.00%
Bootstrap support for L0PD41 as seed ortholog is 100%.
Bootstrap support for H2QHQ7 as seed ortholog is 100%.

Group of orthologs #489. Best score 301 bits
Score difference with first non-orthologous sequence - P.jiroveci:46 P.troglodytes:84

L0PD71              	100.00%		H2QXX8              	100.00%
Bootstrap support for L0PD71 as seed ortholog is 91%.
Bootstrap support for H2QXX8 as seed ortholog is 98%.

Group of orthologs #490. Best score 300 bits
Score difference with first non-orthologous sequence - P.jiroveci:300 P.troglodytes:300

L0PF83              	100.00%		H2QML6              	100.00%
Bootstrap support for L0PF83 as seed ortholog is 100%.
Bootstrap support for H2QML6 as seed ortholog is 100%.

Group of orthologs #491. Best score 299 bits
Score difference with first non-orthologous sequence - P.jiroveci:196 P.troglodytes:119

L0P8B4              	100.00%		H2QV38              	100.00%
                    	       		H2R190              	78.82%
Bootstrap support for L0P8B4 as seed ortholog is 99%.
Bootstrap support for H2QV38 as seed ortholog is 99%.

Group of orthologs #492. Best score 299 bits
Score difference with first non-orthologous sequence - P.jiroveci:181 P.troglodytes:122

L0PB10              	100.00%		H2PYE5              	100.00%
Bootstrap support for L0PB10 as seed ortholog is 100%.
Bootstrap support for H2PYE5 as seed ortholog is 99%.

Group of orthologs #493. Best score 299 bits
Score difference with first non-orthologous sequence - P.jiroveci:299 P.troglodytes:299

L0PF79              	100.00%		H2Q4W6              	100.00%
Bootstrap support for L0PF79 as seed ortholog is 100%.
Bootstrap support for H2Q4W6 as seed ortholog is 100%.

Group of orthologs #494. Best score 299 bits
Score difference with first non-orthologous sequence - P.jiroveci:299 P.troglodytes:227

L0PDZ2              	100.00%		H2QKK8              	100.00%
Bootstrap support for L0PDZ2 as seed ortholog is 100%.
Bootstrap support for H2QKK8 as seed ortholog is 100%.

Group of orthologs #495. Best score 299 bits
Score difference with first non-orthologous sequence - P.jiroveci:227 P.troglodytes:210

L0PBK1              	100.00%		H2RAE4              	100.00%
Bootstrap support for L0PBK1 as seed ortholog is 99%.
Bootstrap support for H2RAE4 as seed ortholog is 100%.

Group of orthologs #496. Best score 298 bits
Score difference with first non-orthologous sequence - P.jiroveci:298 P.troglodytes:210

L0P9Z7              	100.00%		H2QJR5              	100.00%
Bootstrap support for L0P9Z7 as seed ortholog is 100%.
Bootstrap support for H2QJR5 as seed ortholog is 99%.

Group of orthologs #497. Best score 298 bits
Score difference with first non-orthologous sequence - P.jiroveci:298 P.troglodytes:298

L0PFI8              	100.00%		H2QHB9              	100.00%
Bootstrap support for L0PFI8 as seed ortholog is 100%.
Bootstrap support for H2QHB9 as seed ortholog is 100%.

Group of orthologs #498. Best score 296 bits
Score difference with first non-orthologous sequence - P.jiroveci:296 P.troglodytes:296

L0PBH9              	100.00%		H2R1Q9              	100.00%
                    	       		H2QYN1              	32.69%
Bootstrap support for L0PBH9 as seed ortholog is 100%.
Bootstrap support for H2R1Q9 as seed ortholog is 100%.

Group of orthologs #499. Best score 296 bits
Score difference with first non-orthologous sequence - P.jiroveci:296 P.troglodytes:209

L0PEC0              	100.00%		G2HE98              	100.00%
Bootstrap support for L0PEC0 as seed ortholog is 100%.
Bootstrap support for G2HE98 as seed ortholog is 99%.

Group of orthologs #500. Best score 295 bits
Score difference with first non-orthologous sequence - P.jiroveci:295 P.troglodytes:295

L0PG22              	100.00%		H2PZI0              	100.00%
L0PB04              	70.89%		
Bootstrap support for L0PG22 as seed ortholog is 100%.
Bootstrap support for H2PZI0 as seed ortholog is 100%.

Group of orthologs #501. Best score 295 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 P.troglodytes:98

L0P8I7              	100.00%		H2QNB3              	100.00%
Bootstrap support for L0P8I7 as seed ortholog is 100%.
Bootstrap support for H2QNB3 as seed ortholog is 99%.

Group of orthologs #502. Best score 295 bits
Score difference with first non-orthologous sequence - P.jiroveci:295 P.troglodytes:295

L0P9X4              	100.00%		H2QNU6              	100.00%
Bootstrap support for L0P9X4 as seed ortholog is 100%.
Bootstrap support for H2QNU6 as seed ortholog is 100%.

Group of orthologs #503. Best score 295 bits
Score difference with first non-orthologous sequence - P.jiroveci:295 P.troglodytes:295

L0PCI3              	100.00%		Q3YA36              	100.00%
Bootstrap support for L0PCI3 as seed ortholog is 100%.
Bootstrap support for Q3YA36 as seed ortholog is 100%.

Group of orthologs #504. Best score 294 bits
Score difference with first non-orthologous sequence - P.jiroveci:294 P.troglodytes:294

L0PFE1              	100.00%		H2QNW1              	100.00%
Bootstrap support for L0PFE1 as seed ortholog is 100%.
Bootstrap support for H2QNW1 as seed ortholog is 100%.

Group of orthologs #505. Best score 293 bits
Score difference with first non-orthologous sequence - P.jiroveci:293 P.troglodytes:293

L0PDC7              	100.00%		H2Q212              	100.00%
                    	       		H2QPZ6              	28.62%
Bootstrap support for L0PDC7 as seed ortholog is 100%.
Bootstrap support for H2Q212 as seed ortholog is 100%.

Group of orthologs #506. Best score 293 bits
Score difference with first non-orthologous sequence - P.jiroveci:293 P.troglodytes:293

L0PBT9              	100.00%		H2R708              	100.00%
L0P9Y0              	42.18%		
Bootstrap support for L0PBT9 as seed ortholog is 100%.
Bootstrap support for H2R708 as seed ortholog is 100%.

Group of orthologs #507. Best score 292 bits
Score difference with first non-orthologous sequence - P.jiroveci:292 P.troglodytes:292

L0P961              	100.00%		H2QG89              	100.00%
                    	       		H2RDW7              	79.04%
                    	       		H2Q1E4              	67.72%
Bootstrap support for L0P961 as seed ortholog is 100%.
Bootstrap support for H2QG89 as seed ortholog is 100%.

Group of orthologs #508. Best score 291 bits
Score difference with first non-orthologous sequence - P.jiroveci:291 P.troglodytes:291

L0PAC0              	100.00%		H2QBI5              	100.00%
Bootstrap support for L0PAC0 as seed ortholog is 100%.
Bootstrap support for H2QBI5 as seed ortholog is 100%.

Group of orthologs #509. Best score 291 bits
Score difference with first non-orthologous sequence - P.jiroveci:291 P.troglodytes:291

L0PEY2              	100.00%		H2QXQ8              	100.00%
Bootstrap support for L0PEY2 as seed ortholog is 100%.
Bootstrap support for H2QXQ8 as seed ortholog is 100%.

Group of orthologs #510. Best score 291 bits
Score difference with first non-orthologous sequence - P.jiroveci:291 P.troglodytes:291

L0PG44              	100.00%		H2R4F4              	100.00%
Bootstrap support for L0PG44 as seed ortholog is 100%.
Bootstrap support for H2R4F4 as seed ortholog is 100%.

Group of orthologs #511. Best score 290 bits
Score difference with first non-orthologous sequence - P.jiroveci:290 P.troglodytes:290

L0PHG9              	100.00%		H2PYW8              	100.00%
Bootstrap support for L0PHG9 as seed ortholog is 100%.
Bootstrap support for H2PYW8 as seed ortholog is 100%.

Group of orthologs #512. Best score 290 bits
Score difference with first non-orthologous sequence - P.jiroveci:290 P.troglodytes:290

L0PFZ0              	100.00%		H2Q620              	100.00%
Bootstrap support for L0PFZ0 as seed ortholog is 100%.
Bootstrap support for H2Q620 as seed ortholog is 100%.

Group of orthologs #513. Best score 289 bits
Score difference with first non-orthologous sequence - P.jiroveci:289 P.troglodytes:289

L0PDY1              	100.00%		H2Q174              	100.00%
                    	       		H2Q8X2              	48.11%
Bootstrap support for L0PDY1 as seed ortholog is 100%.
Bootstrap support for H2Q174 as seed ortholog is 100%.

Group of orthologs #514. Best score 289 bits
Score difference with first non-orthologous sequence - P.jiroveci:102 P.troglodytes:25

L0PB47              	100.00%		H2QF06              	100.00%
                    	       		Q9XT09              	73.35%
Bootstrap support for L0PB47 as seed ortholog is 99%.
Bootstrap support for H2QF06 as seed ortholog is 72%.
Alternative seed ortholog is H2Q9P0 (25 bits away from this cluster)

Group of orthologs #515. Best score 289 bits
Score difference with first non-orthologous sequence - P.jiroveci:289 P.troglodytes:101

L0PH42              	100.00%		H2QCF9              	100.00%
                    	       		H2QYP4              	52.08%
Bootstrap support for L0PH42 as seed ortholog is 100%.
Bootstrap support for H2QCF9 as seed ortholog is 98%.

Group of orthologs #516. Best score 289 bits
Score difference with first non-orthologous sequence - P.jiroveci:289 P.troglodytes:289

L0PDL6              	100.00%		H2Q406              	100.00%
Bootstrap support for L0PDL6 as seed ortholog is 100%.
Bootstrap support for H2Q406 as seed ortholog is 100%.

Group of orthologs #517. Best score 289 bits
Score difference with first non-orthologous sequence - P.jiroveci:231 P.troglodytes:197

L0PE04              	100.00%		H2Q5J4              	100.00%
Bootstrap support for L0PE04 as seed ortholog is 100%.
Bootstrap support for H2Q5J4 as seed ortholog is 100%.

Group of orthologs #518. Best score 288 bits
Score difference with first non-orthologous sequence - P.jiroveci:288 P.troglodytes:288

L0PHG7              	100.00%		H2Q703              	100.00%
Bootstrap support for L0PHG7 as seed ortholog is 100%.
Bootstrap support for H2Q703 as seed ortholog is 100%.

Group of orthologs #519. Best score 288 bits
Score difference with first non-orthologous sequence - P.jiroveci:288 P.troglodytes:194

L0PEM3              	100.00%		P60051              	100.00%
Bootstrap support for L0PEM3 as seed ortholog is 100%.
Bootstrap support for P60051 as seed ortholog is 100%.

Group of orthologs #520. Best score 286 bits
Score difference with first non-orthologous sequence - P.jiroveci:286 P.troglodytes:157

L0P9F6              	100.00%		G2HGB9              	100.00%
                    	       		H2QQI6              	41.50%
                    	       		H2RG37              	10.95%
Bootstrap support for L0P9F6 as seed ortholog is 100%.
Bootstrap support for G2HGB9 as seed ortholog is 99%.

Group of orthologs #521. Best score 286 bits
Score difference with first non-orthologous sequence - P.jiroveci:286 P.troglodytes:286

L0P9C4              	100.00%		H2QI39              	100.00%
                    	       		H2R0K2              	63.49%
Bootstrap support for L0P9C4 as seed ortholog is 100%.
Bootstrap support for H2QI39 as seed ortholog is 100%.

Group of orthologs #522. Best score 286 bits
Score difference with first non-orthologous sequence - P.jiroveci:286 P.troglodytes:286

L0PAJ2              	100.00%		H2QUQ0              	100.00%
Bootstrap support for L0PAJ2 as seed ortholog is 100%.
Bootstrap support for H2QUQ0 as seed ortholog is 100%.

Group of orthologs #523. Best score 285 bits
Score difference with first non-orthologous sequence - P.jiroveci:285 P.troglodytes:285

L0PDV1              	100.00%		H2QAR9              	100.00%
Bootstrap support for L0PDV1 as seed ortholog is 100%.
Bootstrap support for H2QAR9 as seed ortholog is 100%.

Group of orthologs #524. Best score 284 bits
Score difference with first non-orthologous sequence - P.jiroveci:284 P.troglodytes:192

L0PG89              	100.00%		H2R344              	100.00%
                    	       		H2R5D9              	23.33%
                    	       		H2Q3T7              	21.03%
                    	       		H2QSZ6              	13.77%
                    	       		H2R5W4              	9.75%
Bootstrap support for L0PG89 as seed ortholog is 100%.
Bootstrap support for H2R344 as seed ortholog is 99%.

Group of orthologs #525. Best score 284 bits
Score difference with first non-orthologous sequence - P.jiroveci:284 P.troglodytes:284

L0PGF2              	100.00%		H2QUA4              	100.00%
                    	       		H2RDL2              	48.03%
                    	       		H2R1B2              	26.38%
Bootstrap support for L0PGF2 as seed ortholog is 100%.
Bootstrap support for H2QUA4 as seed ortholog is 100%.

Group of orthologs #526. Best score 284 bits
Score difference with first non-orthologous sequence - P.jiroveci:234 P.troglodytes:191

L0PFE0              	100.00%		H2QAC7              	100.00%
Bootstrap support for L0PFE0 as seed ortholog is 100%.
Bootstrap support for H2QAC7 as seed ortholog is 100%.

Group of orthologs #527. Best score 283 bits
Score difference with first non-orthologous sequence - P.jiroveci:283 P.troglodytes:283

L0PEB1              	100.00%		H2QUS3              	100.00%
                    	       		H2Q750              	38.02%
Bootstrap support for L0PEB1 as seed ortholog is 100%.
Bootstrap support for H2QUS3 as seed ortholog is 100%.

Group of orthologs #528. Best score 283 bits
Score difference with first non-orthologous sequence - P.jiroveci:283 P.troglodytes:283

L0PCY0              	100.00%		H2PYR9              	100.00%
Bootstrap support for L0PCY0 as seed ortholog is 100%.
Bootstrap support for H2PYR9 as seed ortholog is 100%.

Group of orthologs #529. Best score 282 bits
Score difference with first non-orthologous sequence - P.jiroveci:282 P.troglodytes:209

L0PHJ3              	100.00%		H2PZV8              	100.00%
Bootstrap support for L0PHJ3 as seed ortholog is 100%.
Bootstrap support for H2PZV8 as seed ortholog is 100%.

Group of orthologs #530. Best score 282 bits
Score difference with first non-orthologous sequence - P.jiroveci:183 P.troglodytes:88

L0PC59              	100.00%		H2Q894              	100.00%
Bootstrap support for L0PC59 as seed ortholog is 100%.
Bootstrap support for H2Q894 as seed ortholog is 100%.

Group of orthologs #531. Best score 281 bits
Score difference with first non-orthologous sequence - P.jiroveci:281 P.troglodytes:281

L0P9T5              	100.00%		H2QK87              	100.00%
Bootstrap support for L0P9T5 as seed ortholog is 100%.
Bootstrap support for H2QK87 as seed ortholog is 100%.

Group of orthologs #532. Best score 280 bits
Score difference with first non-orthologous sequence - P.jiroveci:280 P.troglodytes:280

L0PBE0              	100.00%		H2QJK6              	100.00%
                    	       		H2Q7K4              	64.89%
Bootstrap support for L0PBE0 as seed ortholog is 100%.
Bootstrap support for H2QJK6 as seed ortholog is 100%.

Group of orthologs #533. Best score 280 bits
Score difference with first non-orthologous sequence - P.jiroveci:280 P.troglodytes:280

L0PEV9              	100.00%		H2QK92              	100.00%
Bootstrap support for L0PEV9 as seed ortholog is 100%.
Bootstrap support for H2QK92 as seed ortholog is 100%.

Group of orthologs #534. Best score 278 bits
Score difference with first non-orthologous sequence - P.jiroveci:278 P.troglodytes:278

L0P9W3              	100.00%		G2HGD0              	100.00%
Bootstrap support for L0P9W3 as seed ortholog is 100%.
Bootstrap support for G2HGD0 as seed ortholog is 100%.

Group of orthologs #535. Best score 277 bits
Score difference with first non-orthologous sequence - P.jiroveci:277 P.troglodytes:277

L0P9S7              	100.00%		G2HH55              	100.00%
Bootstrap support for L0P9S7 as seed ortholog is 100%.
Bootstrap support for G2HH55 as seed ortholog is 100%.

Group of orthologs #536. Best score 277 bits
Score difference with first non-orthologous sequence - P.jiroveci:277 P.troglodytes:277

L0PC61              	100.00%		G2HE47              	100.00%
Bootstrap support for L0PC61 as seed ortholog is 100%.
Bootstrap support for G2HE47 as seed ortholog is 100%.

Group of orthologs #537. Best score 277 bits
Score difference with first non-orthologous sequence - P.jiroveci:277 P.troglodytes:277

L0P7W4              	100.00%		H2QVP0              	100.00%
Bootstrap support for L0P7W4 as seed ortholog is 100%.
Bootstrap support for H2QVP0 as seed ortholog is 100%.

Group of orthologs #538. Best score 277 bits
Score difference with first non-orthologous sequence - P.jiroveci:277 P.troglodytes:277

L0PCX5              	100.00%		H2R0B1              	100.00%
Bootstrap support for L0PCX5 as seed ortholog is 100%.
Bootstrap support for H2R0B1 as seed ortholog is 100%.

Group of orthologs #539. Best score 275 bits
Score difference with first non-orthologous sequence - P.jiroveci:275 P.troglodytes:275

L0P9T2              	100.00%		H2QAJ6              	100.00%
                    	       		H2QLS6              	27.83%
Bootstrap support for L0P9T2 as seed ortholog is 100%.
Bootstrap support for H2QAJ6 as seed ortholog is 100%.

Group of orthologs #540. Best score 275 bits
Score difference with first non-orthologous sequence - P.jiroveci:275 P.troglodytes:218

L0PHN0              	100.00%		H2Q6S9              	100.00%
Bootstrap support for L0PHN0 as seed ortholog is 100%.
Bootstrap support for H2Q6S9 as seed ortholog is 100%.

Group of orthologs #541. Best score 275 bits
Score difference with first non-orthologous sequence - P.jiroveci:275 P.troglodytes:275

L0PDA9              	100.00%		H2QRW8              	100.00%
Bootstrap support for L0PDA9 as seed ortholog is 100%.
Bootstrap support for H2QRW8 as seed ortholog is 100%.

Group of orthologs #542. Best score 274 bits
Score difference with first non-orthologous sequence - P.jiroveci:274 P.troglodytes:274

L0PE17              	100.00%		H2Q378              	100.00%
Bootstrap support for L0PE17 as seed ortholog is 100%.
Bootstrap support for H2Q378 as seed ortholog is 100%.

Group of orthologs #543. Best score 274 bits
Score difference with first non-orthologous sequence - P.jiroveci:274 P.troglodytes:274

L0PAD9              	100.00%		H2QLI7              	100.00%
Bootstrap support for L0PAD9 as seed ortholog is 100%.
Bootstrap support for H2QLI7 as seed ortholog is 100%.

Group of orthologs #544. Best score 274 bits
Score difference with first non-orthologous sequence - P.jiroveci:274 P.troglodytes:274

L0PAQ1              	100.00%		H2QNM5              	100.00%
Bootstrap support for L0PAQ1 as seed ortholog is 100%.
Bootstrap support for H2QNM5 as seed ortholog is 100%.

Group of orthologs #545. Best score 274 bits
Score difference with first non-orthologous sequence - P.jiroveci:274 P.troglodytes:274

L0PBH8              	100.00%		H2QR27              	100.00%
Bootstrap support for L0PBH8 as seed ortholog is 100%.
Bootstrap support for H2QR27 as seed ortholog is 100%.

Group of orthologs #546. Best score 274 bits
Score difference with first non-orthologous sequence - P.jiroveci:274 P.troglodytes:274

L0P9S4              	100.00%		H2QY82              	100.00%
Bootstrap support for L0P9S4 as seed ortholog is 100%.
Bootstrap support for H2QY82 as seed ortholog is 100%.

Group of orthologs #547. Best score 272 bits
Score difference with first non-orthologous sequence - P.jiroveci:163 P.troglodytes:108

L0P9E4              	100.00%		G2HIU2              	100.00%
                    	       		H2QMU4              	30.21%
                    	       		H2QVB1              	29.17%
Bootstrap support for L0P9E4 as seed ortholog is 100%.
Bootstrap support for G2HIU2 as seed ortholog is 99%.

Group of orthologs #548. Best score 272 bits
Score difference with first non-orthologous sequence - P.jiroveci:272 P.troglodytes:272

L0PB03              	100.00%		H2QKQ2              	100.00%
                    	       		H2QED5              	66.98%
Bootstrap support for L0PB03 as seed ortholog is 100%.
Bootstrap support for H2QKQ2 as seed ortholog is 100%.

Group of orthologs #549. Best score 272 bits
Score difference with first non-orthologous sequence - P.jiroveci:272 P.troglodytes:209

L0P8X1              	100.00%		H2Q908              	100.00%
Bootstrap support for L0P8X1 as seed ortholog is 100%.
Bootstrap support for H2Q908 as seed ortholog is 100%.

Group of orthologs #550. Best score 272 bits
Score difference with first non-orthologous sequence - P.jiroveci:272 P.troglodytes:272

L0PFU1              	100.00%		H2Q9W6              	100.00%
Bootstrap support for L0PFU1 as seed ortholog is 100%.
Bootstrap support for H2Q9W6 as seed ortholog is 100%.

Group of orthologs #551. Best score 272 bits
Score difference with first non-orthologous sequence - P.jiroveci:117 P.troglodytes:210

L0PHK8              	100.00%		H2R8U6              	100.00%
Bootstrap support for L0PHK8 as seed ortholog is 99%.
Bootstrap support for H2R8U6 as seed ortholog is 100%.

Group of orthologs #552. Best score 271 bits
Score difference with first non-orthologous sequence - P.jiroveci:38 P.troglodytes:271

L0PAI9              	100.00%		H2R3C4              	100.00%
                    	       		Q5R1W1              	100.00%
                    	       		H2QDJ3              	36.76%
                    	       		H2R735              	34.57%
                    	       		H2QAX3              	27.79%
                    	       		H2QRG8              	8.53%
                    	       		H2QPR2              	8.19%
                    	       		H2QUL4              	5.52%
Bootstrap support for L0PAI9 as seed ortholog is 86%.
Bootstrap support for H2R3C4 as seed ortholog is 100%.
Bootstrap support for Q5R1W1 as seed ortholog is 100%.

Group of orthologs #553. Best score 271 bits
Score difference with first non-orthologous sequence - P.jiroveci:271 P.troglodytes:189

L0PET2              	100.00%		H2QXV4              	100.00%
L0PAE5              	83.64%		H2R3I7              	20.14%
Bootstrap support for L0PET2 as seed ortholog is 100%.
Bootstrap support for H2QXV4 as seed ortholog is 100%.

Group of orthologs #554. Best score 271 bits
Score difference with first non-orthologous sequence - P.jiroveci:271 P.troglodytes:195

L0PDT4              	100.00%		H2R7D5              	100.00%
                    	       		H2R0E8              	46.43%
Bootstrap support for L0PDT4 as seed ortholog is 100%.
Bootstrap support for H2R7D5 as seed ortholog is 99%.

Group of orthologs #555. Best score 271 bits
Score difference with first non-orthologous sequence - P.jiroveci:271 P.troglodytes:271

L0P7Q3              	100.00%		H2Q8F0              	100.00%
Bootstrap support for L0P7Q3 as seed ortholog is 100%.
Bootstrap support for H2Q8F0 as seed ortholog is 100%.

Group of orthologs #556. Best score 271 bits
Score difference with first non-orthologous sequence - P.jiroveci:271 P.troglodytes:186

L0PGG0              	100.00%		H2Q8Q2              	100.00%
Bootstrap support for L0PGG0 as seed ortholog is 100%.
Bootstrap support for H2Q8Q2 as seed ortholog is 99%.

Group of orthologs #557. Best score 271 bits
Score difference with first non-orthologous sequence - P.jiroveci:271 P.troglodytes:224

L0P8L5              	100.00%		H2QIQ2              	100.00%
Bootstrap support for L0P8L5 as seed ortholog is 100%.
Bootstrap support for H2QIQ2 as seed ortholog is 100%.

Group of orthologs #558. Best score 270 bits
Score difference with first non-orthologous sequence - P.jiroveci:270 P.troglodytes:270

L0PA72              	100.00%		H2RHZ2              	100.00%
                    	       		G2HED2              	57.10%
Bootstrap support for L0PA72 as seed ortholog is 100%.
Bootstrap support for H2RHZ2 as seed ortholog is 100%.

Group of orthologs #559. Best score 270 bits
Score difference with first non-orthologous sequence - P.jiroveci:270 P.troglodytes:270

L0PDJ2              	100.00%		G2HEK6              	100.00%
Bootstrap support for L0PDJ2 as seed ortholog is 100%.
Bootstrap support for G2HEK6 as seed ortholog is 100%.

Group of orthologs #560. Best score 270 bits
Score difference with first non-orthologous sequence - P.jiroveci:45 P.troglodytes:21

L0PA26              	100.00%		H2QBR7              	100.00%
Bootstrap support for L0PA26 as seed ortholog is 90%.
Bootstrap support for H2QBR7 as seed ortholog is 72%.
Alternative seed ortholog is H2R7P8 (21 bits away from this cluster)

Group of orthologs #561. Best score 270 bits
Score difference with first non-orthologous sequence - P.jiroveci:270 P.troglodytes:270

L0P8T4              	100.00%		H2QDT5              	100.00%
Bootstrap support for L0P8T4 as seed ortholog is 100%.
Bootstrap support for H2QDT5 as seed ortholog is 100%.

Group of orthologs #562. Best score 270 bits
Score difference with first non-orthologous sequence - P.jiroveci:270 P.troglodytes:270

L0PGV8              	100.00%		H2R4V9              	100.00%
Bootstrap support for L0PGV8 as seed ortholog is 100%.
Bootstrap support for H2R4V9 as seed ortholog is 100%.

Group of orthologs #563. Best score 269 bits
Score difference with first non-orthologous sequence - P.jiroveci:269 P.troglodytes:269

L0PBV6              	100.00%		G2HIX7              	100.00%
Bootstrap support for L0PBV6 as seed ortholog is 100%.
Bootstrap support for G2HIX7 as seed ortholog is 100%.

Group of orthologs #564. Best score 268 bits
Score difference with first non-orthologous sequence - P.jiroveci:268 P.troglodytes:160

L0PDR6              	100.00%		H2Q7B8              	100.00%
                    	       		H2QPG6              	81.78%
Bootstrap support for L0PDR6 as seed ortholog is 100%.
Bootstrap support for H2Q7B8 as seed ortholog is 99%.

Group of orthologs #565. Best score 268 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 P.troglodytes:38

L0PDD3              	100.00%		H2QI57              	100.00%
                    	       		H2RCF2              	100.00%
Bootstrap support for L0PDD3 as seed ortholog is 99%.
Bootstrap support for H2QI57 as seed ortholog is 92%.
Bootstrap support for H2RCF2 as seed ortholog is 92%.

Group of orthologs #566. Best score 268 bits
Score difference with first non-orthologous sequence - P.jiroveci:268 P.troglodytes:268

L0P7L7              	100.00%		H2QGZ5              	100.00%
Bootstrap support for L0P7L7 as seed ortholog is 100%.
Bootstrap support for H2QGZ5 as seed ortholog is 100%.

Group of orthologs #567. Best score 267 bits
Score difference with first non-orthologous sequence - P.jiroveci:267 P.troglodytes:137

L0PBM0              	100.00%		H2Q1B2              	100.00%
                    	       		H2Q2I6              	11.50%
Bootstrap support for L0PBM0 as seed ortholog is 100%.
Bootstrap support for H2Q1B2 as seed ortholog is 99%.

Group of orthologs #568. Best score 267 bits
Score difference with first non-orthologous sequence - P.jiroveci:267 P.troglodytes:267

L0PI09              	100.00%		H2Q973              	100.00%
Bootstrap support for L0PI09 as seed ortholog is 100%.
Bootstrap support for H2Q973 as seed ortholog is 100%.

Group of orthologs #569. Best score 266 bits
Score difference with first non-orthologous sequence - P.jiroveci:266 P.troglodytes:266

L0PGD7              	100.00%		H2QGR1              	100.00%
L0PGQ0              	54.44%		H2QLN5              	36.97%
Bootstrap support for L0PGD7 as seed ortholog is 100%.
Bootstrap support for H2QGR1 as seed ortholog is 100%.

Group of orthologs #570. Best score 265 bits
Score difference with first non-orthologous sequence - P.jiroveci:265 P.troglodytes:265

L0P6P2              	100.00%		H2Q557              	100.00%
                    	       		H2Q203              	49.39%
Bootstrap support for L0P6P2 as seed ortholog is 100%.
Bootstrap support for H2Q557 as seed ortholog is 100%.

Group of orthologs #571. Best score 265 bits
Score difference with first non-orthologous sequence - P.jiroveci:265 P.troglodytes:123

L0PDT8              	100.00%		H2PZ92              	100.00%
L0P9R2              	89.95%		
Bootstrap support for L0PDT8 as seed ortholog is 100%.
Bootstrap support for H2PZ92 as seed ortholog is 99%.

Group of orthologs #572. Best score 265 bits
Score difference with first non-orthologous sequence - P.jiroveci:265 P.troglodytes:265

L0PG08              	100.00%		H2QBH6              	100.00%
Bootstrap support for L0PG08 as seed ortholog is 100%.
Bootstrap support for H2QBH6 as seed ortholog is 100%.

Group of orthologs #573. Best score 264 bits
Score difference with first non-orthologous sequence - P.jiroveci:264 P.troglodytes:264

L0PB61              	100.00%		H2R517              	100.00%
Bootstrap support for L0PB61 as seed ortholog is 100%.
Bootstrap support for H2R517 as seed ortholog is 100%.

Group of orthologs #574. Best score 262 bits
Score difference with first non-orthologous sequence - P.jiroveci:262 P.troglodytes:50

L0PDF9              	100.00%		H2QMN4              	100.00%
                    	       		H2QUU5              	81.54%
                    	       		H2PZK9              	80.22%
                    	       		H2RBI6              	55.60%
                    	       		H2PZL0              	54.73%
                    	       		H2QB45              	52.97%
                    	       		H2QMN3              	49.45%
                    	       		H2QLC1              	48.35%
                    	       		H2QXD4              	18.02%
                    	       		H2R6M4              	14.73%
Bootstrap support for L0PDF9 as seed ortholog is 100%.
Bootstrap support for H2QMN4 as seed ortholog is 95%.

Group of orthologs #575. Best score 259 bits
Score difference with first non-orthologous sequence - P.jiroveci:259 P.troglodytes:190

L0PBS3              	100.00%		H2RCM9              	100.00%
Bootstrap support for L0PBS3 as seed ortholog is 100%.
Bootstrap support for H2RCM9 as seed ortholog is 99%.

Group of orthologs #576. Best score 258 bits
Score difference with first non-orthologous sequence - P.jiroveci:258 P.troglodytes:154

L0PGL1              	100.00%		H2QBR1              	100.00%
Bootstrap support for L0PGL1 as seed ortholog is 100%.
Bootstrap support for H2QBR1 as seed ortholog is 99%.

Group of orthologs #577. Best score 257 bits
Score difference with first non-orthologous sequence - P.jiroveci:257 P.troglodytes:257

L0P9F7              	100.00%		H2Q3V7              	100.00%
L0PGP0              	82.53%		H2RH61              	22.43%
Bootstrap support for L0P9F7 as seed ortholog is 100%.
Bootstrap support for H2Q3V7 as seed ortholog is 100%.

Group of orthologs #578. Best score 257 bits
Score difference with first non-orthologous sequence - P.jiroveci:257 P.troglodytes:137

L0PAM8              	100.00%		H2Q6P3              	100.00%
Bootstrap support for L0PAM8 as seed ortholog is 100%.
Bootstrap support for H2Q6P3 as seed ortholog is 99%.

Group of orthologs #579. Best score 257 bits
Score difference with first non-orthologous sequence - P.jiroveci:157 P.troglodytes:152

L0PFK0              	100.00%		H2QIC7              	100.00%
Bootstrap support for L0PFK0 as seed ortholog is 99%.
Bootstrap support for H2QIC7 as seed ortholog is 99%.

Group of orthologs #580. Best score 257 bits
Score difference with first non-orthologous sequence - P.jiroveci:257 P.troglodytes:257

L0PBK2              	100.00%		H2QQS5              	100.00%
Bootstrap support for L0PBK2 as seed ortholog is 100%.
Bootstrap support for H2QQS5 as seed ortholog is 100%.

Group of orthologs #581. Best score 257 bits
Score difference with first non-orthologous sequence - P.jiroveci:257 P.troglodytes:72

L0PG48              	100.00%		H2QZB3              	100.00%
Bootstrap support for L0PG48 as seed ortholog is 100%.
Bootstrap support for H2QZB3 as seed ortholog is 95%.

Group of orthologs #582. Best score 256 bits
Score difference with first non-orthologous sequence - P.jiroveci:256 P.troglodytes:256

L0P9I2              	100.00%		H2QIJ3              	100.00%
Bootstrap support for L0P9I2 as seed ortholog is 100%.
Bootstrap support for H2QIJ3 as seed ortholog is 100%.

Group of orthologs #583. Best score 255 bits
Score difference with first non-orthologous sequence - P.jiroveci:255 P.troglodytes:255

L0PE74              	100.00%		H2Q5L8              	100.00%
                    	       		H2QGS7              	33.21%
Bootstrap support for L0PE74 as seed ortholog is 100%.
Bootstrap support for H2Q5L8 as seed ortholog is 100%.

Group of orthologs #584. Best score 255 bits
Score difference with first non-orthologous sequence - P.jiroveci:255 P.troglodytes:255

L0PEY5              	100.00%		A1XD93              	100.00%
Bootstrap support for L0PEY5 as seed ortholog is 100%.
Bootstrap support for A1XD93 as seed ortholog is 100%.

Group of orthologs #585. Best score 255 bits
Score difference with first non-orthologous sequence - P.jiroveci:255 P.troglodytes:255

L0PET8              	100.00%		H2QMX7              	100.00%
Bootstrap support for L0PET8 as seed ortholog is 100%.
Bootstrap support for H2QMX7 as seed ortholog is 100%.

Group of orthologs #586. Best score 255 bits
Score difference with first non-orthologous sequence - P.jiroveci:192 P.troglodytes:170

L0PFY7              	100.00%		H2QZD6              	100.00%
Bootstrap support for L0PFY7 as seed ortholog is 100%.
Bootstrap support for H2QZD6 as seed ortholog is 100%.

Group of orthologs #587. Best score 255 bits
Score difference with first non-orthologous sequence - P.jiroveci:255 P.troglodytes:255

L0P723              	100.00%		H2RBI2              	100.00%
Bootstrap support for L0P723 as seed ortholog is 100%.
Bootstrap support for H2RBI2 as seed ortholog is 100%.

Group of orthologs #588. Best score 254 bits
Score difference with first non-orthologous sequence - P.jiroveci:179 P.troglodytes:185

L0PF24              	100.00%		H2QV39              	100.00%
                    	       		H2QNS5              	87.53%
                    	       		H2R3A6              	71.49%
                    	       		H2Q9G5              	22.27%
Bootstrap support for L0PF24 as seed ortholog is 100%.
Bootstrap support for H2QV39 as seed ortholog is 100%.

Group of orthologs #589. Best score 254 bits
Score difference with first non-orthologous sequence - P.jiroveci:254 P.troglodytes:254

L0PCC1              	100.00%		G2HGL9              	100.00%
Bootstrap support for L0PCC1 as seed ortholog is 100%.
Bootstrap support for G2HGL9 as seed ortholog is 100%.

Group of orthologs #590. Best score 254 bits
Score difference with first non-orthologous sequence - P.jiroveci:254 P.troglodytes:254

L0PEN7              	100.00%		H2QXC9              	100.00%
Bootstrap support for L0PEN7 as seed ortholog is 100%.
Bootstrap support for H2QXC9 as seed ortholog is 100%.

Group of orthologs #591. Best score 253 bits
Score difference with first non-orthologous sequence - P.jiroveci:253 P.troglodytes:253

L0P949              	100.00%		H2Q528              	100.00%
Bootstrap support for L0P949 as seed ortholog is 100%.
Bootstrap support for H2Q528 as seed ortholog is 100%.

Group of orthologs #592. Best score 253 bits
Score difference with first non-orthologous sequence - P.jiroveci:253 P.troglodytes:96

L0P962              	100.00%		H2QVC5              	100.00%
Bootstrap support for L0P962 as seed ortholog is 100%.
Bootstrap support for H2QVC5 as seed ortholog is 95%.

Group of orthologs #593. Best score 253 bits
Score difference with first non-orthologous sequence - P.jiroveci:253 P.troglodytes:253

L0P7I8              	100.00%		H2R9E0              	100.00%
Bootstrap support for L0P7I8 as seed ortholog is 100%.
Bootstrap support for H2R9E0 as seed ortholog is 100%.

Group of orthologs #594. Best score 252 bits
Score difference with first non-orthologous sequence - P.jiroveci:252 P.troglodytes:252

L0PDN4              	100.00%		H2Q6I7              	100.00%
                    	       		H2R5I8              	33.97%
Bootstrap support for L0PDN4 as seed ortholog is 100%.
Bootstrap support for H2Q6I7 as seed ortholog is 100%.

Group of orthologs #595. Best score 252 bits
Score difference with first non-orthologous sequence - P.jiroveci:252 P.troglodytes:252

L0PF44              	100.00%		H2QUN6              	100.00%
Bootstrap support for L0PF44 as seed ortholog is 100%.
Bootstrap support for H2QUN6 as seed ortholog is 100%.

Group of orthologs #596. Best score 251 bits
Score difference with first non-orthologous sequence - P.jiroveci:170 P.troglodytes:251

L0PBY9              	100.00%		H2PZ38              	100.00%
Bootstrap support for L0PBY9 as seed ortholog is 100%.
Bootstrap support for H2PZ38 as seed ortholog is 100%.

Group of orthologs #597. Best score 251 bits
Score difference with first non-orthologous sequence - P.jiroveci:200 P.troglodytes:33

L0PGP6              	100.00%		H2RE59              	100.00%
Bootstrap support for L0PGP6 as seed ortholog is 100%.
Bootstrap support for H2RE59 as seed ortholog is 91%.

Group of orthologs #598. Best score 250 bits
Score difference with first non-orthologous sequence - P.jiroveci:250 P.troglodytes:106

L0PEX1              	100.00%		H2PYL4              	100.00%
Bootstrap support for L0PEX1 as seed ortholog is 100%.
Bootstrap support for H2PYL4 as seed ortholog is 99%.

Group of orthologs #599. Best score 250 bits
Score difference with first non-orthologous sequence - P.jiroveci:250 P.troglodytes:250

L0PFC0              	100.00%		H2PZC5              	100.00%
Bootstrap support for L0PFC0 as seed ortholog is 100%.
Bootstrap support for H2PZC5 as seed ortholog is 100%.

Group of orthologs #600. Best score 250 bits
Score difference with first non-orthologous sequence - P.jiroveci:173 P.troglodytes:106

L0PA17              	100.00%		H2QL51              	100.00%
Bootstrap support for L0PA17 as seed ortholog is 100%.
Bootstrap support for H2QL51 as seed ortholog is 100%.

Group of orthologs #601. Best score 250 bits
Score difference with first non-orthologous sequence - P.jiroveci:250 P.troglodytes:250

L0P7P7              	100.00%		H2QTB4              	100.00%
Bootstrap support for L0P7P7 as seed ortholog is 100%.
Bootstrap support for H2QTB4 as seed ortholog is 100%.

Group of orthologs #602. Best score 249 bits
Score difference with first non-orthologous sequence - P.jiroveci:249 P.troglodytes:249

L0PG86              	100.00%		H2Q247              	100.00%
Bootstrap support for L0PG86 as seed ortholog is 100%.
Bootstrap support for H2Q247 as seed ortholog is 100%.

Group of orthologs #603. Best score 249 bits
Score difference with first non-orthologous sequence - P.jiroveci:58 P.troglodytes:249

L0PAQ7              	100.00%		H2QSN4              	100.00%
Bootstrap support for L0PAQ7 as seed ortholog is 97%.
Bootstrap support for H2QSN4 as seed ortholog is 100%.

Group of orthologs #604. Best score 248 bits
Score difference with first non-orthologous sequence - P.jiroveci:157 P.troglodytes:67

L0P876              	100.00%		H2QRL6              	100.00%
                    	       		H2Q1X5              	59.70%
Bootstrap support for L0P876 as seed ortholog is 100%.
Bootstrap support for H2QRL6 as seed ortholog is 99%.

Group of orthologs #605. Best score 248 bits
Score difference with first non-orthologous sequence - P.jiroveci:248 P.troglodytes:248

L0PD38              	100.00%		H2R046              	100.00%
                    	       		H2R3T7              	29.24%
Bootstrap support for L0PD38 as seed ortholog is 100%.
Bootstrap support for H2R046 as seed ortholog is 100%.

Group of orthologs #606. Best score 248 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 P.troglodytes:35

L0PGH8              	100.00%		G2HF14              	100.00%
Bootstrap support for L0PGH8 as seed ortholog is 99%.
Bootstrap support for G2HF14 as seed ortholog is 78%.

Group of orthologs #607. Best score 247 bits
Score difference with first non-orthologous sequence - P.jiroveci:247 P.troglodytes:247

L0PES4              	100.00%		H2QER0              	100.00%
Bootstrap support for L0PES4 as seed ortholog is 100%.
Bootstrap support for H2QER0 as seed ortholog is 100%.

Group of orthologs #608. Best score 247 bits
Score difference with first non-orthologous sequence - P.jiroveci:247 P.troglodytes:197

L0PE61              	100.00%		H2QUS9              	100.00%
Bootstrap support for L0PE61 as seed ortholog is 100%.
Bootstrap support for H2QUS9 as seed ortholog is 100%.

Group of orthologs #609. Best score 246 bits
Score difference with first non-orthologous sequence - P.jiroveci:246 P.troglodytes:246

L0PCR8              	100.00%		H2Q1L5              	100.00%
L0PH75              	90.68%		
Bootstrap support for L0PCR8 as seed ortholog is 100%.
Bootstrap support for H2Q1L5 as seed ortholog is 100%.

Group of orthologs #610. Best score 246 bits
Score difference with first non-orthologous sequence - P.jiroveci:246 P.troglodytes:246

L0P9P0              	100.00%		G2HGE5              	100.00%
Bootstrap support for L0P9P0 as seed ortholog is 100%.
Bootstrap support for G2HGE5 as seed ortholog is 100%.

Group of orthologs #611. Best score 246 bits
Score difference with first non-orthologous sequence - P.jiroveci:246 P.troglodytes:51

L0PCJ2              	100.00%		H2QSR8              	100.00%
Bootstrap support for L0PCJ2 as seed ortholog is 100%.
Bootstrap support for H2QSR8 as seed ortholog is 95%.

Group of orthologs #612. Best score 245 bits
Score difference with first non-orthologous sequence - P.jiroveci:245 P.troglodytes:245

L0P9J6              	100.00%		H2QK82              	100.00%
L0PH67              	86.64%		
Bootstrap support for L0P9J6 as seed ortholog is 100%.
Bootstrap support for H2QK82 as seed ortholog is 100%.

Group of orthologs #613. Best score 245 bits
Score difference with first non-orthologous sequence - P.jiroveci:245 P.troglodytes:245

L0PGV2              	100.00%		H2QQA1              	100.00%
L0PG40              	61.81%		
Bootstrap support for L0PGV2 as seed ortholog is 100%.
Bootstrap support for H2QQA1 as seed ortholog is 100%.

Group of orthologs #614. Best score 245 bits
Score difference with first non-orthologous sequence - P.jiroveci:245 P.troglodytes:110

L0PAG1              	100.00%		H2Q1R4              	100.00%
Bootstrap support for L0PAG1 as seed ortholog is 100%.
Bootstrap support for H2Q1R4 as seed ortholog is 99%.

Group of orthologs #615. Best score 245 bits
Score difference with first non-orthologous sequence - P.jiroveci:245 P.troglodytes:245

L0PHK5              	100.00%		G2HHD1              	100.00%
Bootstrap support for L0PHK5 as seed ortholog is 100%.
Bootstrap support for G2HHD1 as seed ortholog is 100%.

Group of orthologs #616. Best score 245 bits
Score difference with first non-orthologous sequence - P.jiroveci:245 P.troglodytes:200

L0PG93              	100.00%		H2Q3T2              	100.00%
Bootstrap support for L0PG93 as seed ortholog is 100%.
Bootstrap support for H2Q3T2 as seed ortholog is 100%.

Group of orthologs #617. Best score 244 bits
Score difference with first non-orthologous sequence - P.jiroveci:244 P.troglodytes:244

L0P896              	100.00%		H2QFY2              	100.00%
                    	       		Q69BK5              	100.00%
                    	       		H2QLR0              	98.01%
Bootstrap support for L0P896 as seed ortholog is 100%.
Bootstrap support for H2QFY2 as seed ortholog is 100%.
Bootstrap support for Q69BK5 as seed ortholog is 100%.

Group of orthologs #618. Best score 244 bits
Score difference with first non-orthologous sequence - P.jiroveci:244 P.troglodytes:244

L0PDS2              	100.00%		P60027              	100.00%
Bootstrap support for L0PDS2 as seed ortholog is 100%.
Bootstrap support for P60027 as seed ortholog is 100%.

Group of orthologs #619. Best score 243 bits
Score difference with first non-orthologous sequence - P.jiroveci:243 P.troglodytes:172

L0P9B8              	100.00%		H2QGR2              	100.00%
Bootstrap support for L0P9B8 as seed ortholog is 100%.
Bootstrap support for H2QGR2 as seed ortholog is 99%.

Group of orthologs #620. Best score 243 bits
Score difference with first non-orthologous sequence - P.jiroveci:243 P.troglodytes:243

L0P9R7              	100.00%		H2R457              	100.00%
Bootstrap support for L0P9R7 as seed ortholog is 100%.
Bootstrap support for H2R457 as seed ortholog is 100%.

Group of orthologs #621. Best score 243 bits
Score difference with first non-orthologous sequence - P.jiroveci:243 P.troglodytes:243

L0PCG1              	100.00%		H2R5I3              	100.00%
Bootstrap support for L0PCG1 as seed ortholog is 100%.
Bootstrap support for H2R5I3 as seed ortholog is 100%.

Group of orthologs #622. Best score 243 bits
Score difference with first non-orthologous sequence - P.jiroveci:243 P.troglodytes:243

L0PGQ4              	100.00%		H2R3F6              	100.00%
Bootstrap support for L0PGQ4 as seed ortholog is 100%.
Bootstrap support for H2R3F6 as seed ortholog is 100%.

Group of orthologs #623. Best score 242 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 P.troglodytes:242

L0PID4              	100.00%		H2QN92              	100.00%
L0PGF7              	32.76%		
Bootstrap support for L0PID4 as seed ortholog is 100%.
Bootstrap support for H2QN92 as seed ortholog is 100%.

Group of orthologs #624. Best score 242 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 P.troglodytes:242

L0PCH0              	100.00%		H2R278              	100.00%
                    	       		H2Q205              	32.61%
Bootstrap support for L0PCH0 as seed ortholog is 100%.
Bootstrap support for H2R278 as seed ortholog is 100%.

Group of orthologs #625. Best score 242 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 P.troglodytes:242

L0P784              	100.00%		G2HFR4              	100.00%
Bootstrap support for L0P784 as seed ortholog is 100%.
Bootstrap support for G2HFR4 as seed ortholog is 100%.

Group of orthologs #626. Best score 242 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 P.troglodytes:242

L0P7H2              	100.00%		H2QM70              	100.00%
Bootstrap support for L0P7H2 as seed ortholog is 100%.
Bootstrap support for H2QM70 as seed ortholog is 100%.

Group of orthologs #627. Best score 242 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 P.troglodytes:242

L0PBG0              	100.00%		H2R1Z1              	100.00%
Bootstrap support for L0PBG0 as seed ortholog is 100%.
Bootstrap support for H2R1Z1 as seed ortholog is 100%.

Group of orthologs #628. Best score 242 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 P.troglodytes:242

L0PGN8              	100.00%		H2R0M9              	100.00%
Bootstrap support for L0PGN8 as seed ortholog is 100%.
Bootstrap support for H2R0M9 as seed ortholog is 100%.

Group of orthologs #629. Best score 242 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 P.troglodytes:242

L0PHL0              	100.00%		H2R9E3              	100.00%
Bootstrap support for L0PHL0 as seed ortholog is 100%.
Bootstrap support for H2R9E3 as seed ortholog is 100%.

Group of orthologs #630. Best score 242 bits
Score difference with first non-orthologous sequence - P.jiroveci:242 P.troglodytes:242

L0PF73              	100.00%		P60175              	100.00%
Bootstrap support for L0PF73 as seed ortholog is 100%.
Bootstrap support for P60175 as seed ortholog is 100%.

Group of orthologs #631. Best score 241 bits
Score difference with first non-orthologous sequence - P.jiroveci:241 P.troglodytes:109

L0PIJ3              	100.00%		H2R088              	100.00%
L0PEP1              	83.10%		
Bootstrap support for L0PIJ3 as seed ortholog is 100%.
Bootstrap support for H2R088 as seed ortholog is 98%.

Group of orthologs #632. Best score 240 bits
Score difference with first non-orthologous sequence - P.jiroveci:240 P.troglodytes:240

L0PAG8              	100.00%		H2PZS7              	100.00%
Bootstrap support for L0PAG8 as seed ortholog is 100%.
Bootstrap support for H2PZS7 as seed ortholog is 100%.

Group of orthologs #633. Best score 240 bits
Score difference with first non-orthologous sequence - P.jiroveci:185 P.troglodytes:193

L0P895              	100.00%		H2RF87              	100.00%
Bootstrap support for L0P895 as seed ortholog is 100%.
Bootstrap support for H2RF87 as seed ortholog is 100%.

Group of orthologs #634. Best score 239 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 P.troglodytes:139

L0P9F9              	100.00%		H2QA97              	100.00%
Bootstrap support for L0P9F9 as seed ortholog is 100%.
Bootstrap support for H2QA97 as seed ortholog is 100%.

Group of orthologs #635. Best score 239 bits
Score difference with first non-orthologous sequence - P.jiroveci:239 P.troglodytes:239

L0P8F0              	100.00%		H2QK76              	100.00%
Bootstrap support for L0P8F0 as seed ortholog is 100%.
Bootstrap support for H2QK76 as seed ortholog is 100%.

Group of orthologs #636. Best score 238 bits
Score difference with first non-orthologous sequence - P.jiroveci:238 P.troglodytes:238

L0PEJ1              	100.00%		H2PYV2              	100.00%
                    	       		H2R1B0              	44.39%
                    	       		H2QF27              	39.68%
Bootstrap support for L0PEJ1 as seed ortholog is 100%.
Bootstrap support for H2PYV2 as seed ortholog is 100%.

Group of orthologs #637. Best score 237 bits
Score difference with first non-orthologous sequence - P.jiroveci:237 P.troglodytes:237

L0P9G0              	100.00%		H2QJF2              	100.00%
                    	       		H2R8D8              	31.47%
                    	       		H2QM57              	20.63%
                    	       		H2Q5K1              	20.47%
                    	       		H2QJ75              	18.33%
                    	       		H2QKD0              	11.76%
                    	       		H2QBL0              	10.77%
                    	       		H2QJY5              	9.40%
                    	       		H2QJY4              	8.25%
                    	       		H2Q961              	7.87%
                    	       		H2Q3Z3              	6.88%
Bootstrap support for L0P9G0 as seed ortholog is 100%.
Bootstrap support for H2QJF2 as seed ortholog is 100%.

Group of orthologs #638. Best score 237 bits
Score difference with first non-orthologous sequence - P.jiroveci:164 P.troglodytes:116

L0PFE3              	100.00%		H2R8K9              	100.00%
                    	       		H2Q9S8              	45.57%
                    	       		H2QS47              	40.70%
                    	       		H2QJ82              	38.58%
Bootstrap support for L0PFE3 as seed ortholog is 99%.
Bootstrap support for H2R8K9 as seed ortholog is 99%.

Group of orthologs #639. Best score 237 bits
Score difference with first non-orthologous sequence - P.jiroveci:237 P.troglodytes:237

L0P834              	100.00%		H2Q762              	100.00%
Bootstrap support for L0P834 as seed ortholog is 100%.
Bootstrap support for H2Q762 as seed ortholog is 100%.

Group of orthologs #640. Best score 237 bits
Score difference with first non-orthologous sequence - P.jiroveci:237 P.troglodytes:104

L0PEJ9              	100.00%		H2QEA7              	100.00%
Bootstrap support for L0PEJ9 as seed ortholog is 100%.
Bootstrap support for H2QEA7 as seed ortholog is 99%.

Group of orthologs #641. Best score 237 bits
Score difference with first non-orthologous sequence - P.jiroveci:237 P.troglodytes:237

L0PBP9              	100.00%		H2QJ54              	100.00%
Bootstrap support for L0PBP9 as seed ortholog is 100%.
Bootstrap support for H2QJ54 as seed ortholog is 100%.

Group of orthologs #642. Best score 237 bits
Score difference with first non-orthologous sequence - P.jiroveci:237 P.troglodytes:237

L0PBZ6              	100.00%		H2QZG4              	100.00%
Bootstrap support for L0PBZ6 as seed ortholog is 100%.
Bootstrap support for H2QZG4 as seed ortholog is 100%.

Group of orthologs #643. Best score 237 bits
Score difference with first non-orthologous sequence - P.jiroveci:237 P.troglodytes:237

L0PE58              	100.00%		H2RE42              	100.00%
Bootstrap support for L0PE58 as seed ortholog is 100%.
Bootstrap support for H2RE42 as seed ortholog is 100%.

Group of orthologs #644. Best score 237 bits
Score difference with first non-orthologous sequence - P.jiroveci:237 P.troglodytes:237

L0PBA4              	100.00%		Q0MQG8              	100.00%
Bootstrap support for L0PBA4 as seed ortholog is 100%.
Bootstrap support for Q0MQG8 as seed ortholog is 100%.

Group of orthologs #645. Best score 236 bits
Score difference with first non-orthologous sequence - P.jiroveci:236 P.troglodytes:236

L0PDH2              	100.00%		G2HEG8              	100.00%
Bootstrap support for L0PDH2 as seed ortholog is 100%.
Bootstrap support for G2HEG8 as seed ortholog is 100%.

Group of orthologs #646. Best score 236 bits
Score difference with first non-orthologous sequence - P.jiroveci:236 P.troglodytes:142

L0PCQ6              	100.00%		H2QBM7              	100.00%
Bootstrap support for L0PCQ6 as seed ortholog is 100%.
Bootstrap support for H2QBM7 as seed ortholog is 99%.

Group of orthologs #647. Best score 236 bits
Score difference with first non-orthologous sequence - P.jiroveci:236 P.troglodytes:236

L0PB28              	100.00%		H2QFG6              	100.00%
Bootstrap support for L0PB28 as seed ortholog is 100%.
Bootstrap support for H2QFG6 as seed ortholog is 100%.

Group of orthologs #648. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 P.troglodytes:159

L0P7B2              	100.00%		H2QA81              	100.00%
L0P9D3              	100.00%		
Bootstrap support for L0P7B2 as seed ortholog is 100%.
Bootstrap support for L0P9D3 as seed ortholog is 100%.
Bootstrap support for H2QA81 as seed ortholog is 99%.

Group of orthologs #649. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 P.troglodytes:163

L0P858              	100.00%		H2QAT4              	100.00%
L0PDX5              	68.21%		
Bootstrap support for L0P858 as seed ortholog is 100%.
Bootstrap support for H2QAT4 as seed ortholog is 99%.

Group of orthologs #650. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:175 P.troglodytes:114

L0PGN9              	100.00%		G2HI82              	100.00%
Bootstrap support for L0PGN9 as seed ortholog is 99%.
Bootstrap support for G2HI82 as seed ortholog is 99%.

Group of orthologs #651. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 P.troglodytes:235

L0PG68              	100.00%		H2Q7Z6              	100.00%
Bootstrap support for L0PG68 as seed ortholog is 100%.
Bootstrap support for H2Q7Z6 as seed ortholog is 100%.

Group of orthologs #652. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 P.troglodytes:235

L0P9N2              	100.00%		H2QJE2              	100.00%
Bootstrap support for L0P9N2 as seed ortholog is 100%.
Bootstrap support for H2QJE2 as seed ortholog is 100%.

Group of orthologs #653. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 P.troglodytes:235

L0P9L7              	100.00%		H2QJZ4              	100.00%
Bootstrap support for L0P9L7 as seed ortholog is 100%.
Bootstrap support for H2QJZ4 as seed ortholog is 100%.

Group of orthologs #654. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 P.troglodytes:235

L0PBC7              	100.00%		H2QL02              	100.00%
Bootstrap support for L0PBC7 as seed ortholog is 100%.
Bootstrap support for H2QL02 as seed ortholog is 100%.

Group of orthologs #655. Best score 235 bits
Score difference with first non-orthologous sequence - P.jiroveci:235 P.troglodytes:235

L0PAZ5              	100.00%		H2QWP8              	100.00%
Bootstrap support for L0PAZ5 as seed ortholog is 100%.
Bootstrap support for H2QWP8 as seed ortholog is 100%.

Group of orthologs #656. Best score 234 bits
Score difference with first non-orthologous sequence - P.jiroveci:234 P.troglodytes:234

L0PEW5              	100.00%		H2Q778              	100.00%
Bootstrap support for L0PEW5 as seed ortholog is 100%.
Bootstrap support for H2Q778 as seed ortholog is 100%.

Group of orthologs #657. Best score 234 bits
Score difference with first non-orthologous sequence - P.jiroveci:234 P.troglodytes:234

L0PFE6              	100.00%		H2R446              	100.00%
Bootstrap support for L0PFE6 as seed ortholog is 100%.
Bootstrap support for H2R446 as seed ortholog is 100%.

Group of orthologs #658. Best score 233 bits
Score difference with first non-orthologous sequence - P.jiroveci:233 P.troglodytes:188

L0PFS8              	100.00%		H2PZK3              	100.00%
Bootstrap support for L0PFS8 as seed ortholog is 100%.
Bootstrap support for H2PZK3 as seed ortholog is 100%.

Group of orthologs #659. Best score 233 bits
Score difference with first non-orthologous sequence - P.jiroveci:233 P.troglodytes:233

L0P9G1              	100.00%		H2Q8D7              	100.00%
Bootstrap support for L0P9G1 as seed ortholog is 100%.
Bootstrap support for H2Q8D7 as seed ortholog is 100%.

Group of orthologs #660. Best score 233 bits
Score difference with first non-orthologous sequence - P.jiroveci:233 P.troglodytes:233

L0PG81              	100.00%		H2QR13              	100.00%
Bootstrap support for L0PG81 as seed ortholog is 100%.
Bootstrap support for H2QR13 as seed ortholog is 100%.

Group of orthologs #661. Best score 232 bits
Score difference with first non-orthologous sequence - P.jiroveci:232 P.troglodytes:32

L0PC75              	100.00%		G2HG33              	100.00%
                    	       		H2PYL2              	100.00%
                    	       		H2QWI8              	78.40%
                    	       		H2QHG8              	28.40%
                    	       		H2PYR0              	24.69%
Bootstrap support for L0PC75 as seed ortholog is 100%.
Bootstrap support for G2HG33 as seed ortholog is 95%.
Bootstrap support for H2PYL2 as seed ortholog is 95%.

Group of orthologs #662. Best score 232 bits
Score difference with first non-orthologous sequence - P.jiroveci:232 P.troglodytes:232

L0P8K8              	100.00%		H2PZY5              	100.00%
Bootstrap support for L0P8K8 as seed ortholog is 100%.
Bootstrap support for H2PZY5 as seed ortholog is 100%.

Group of orthologs #663. Best score 232 bits
Score difference with first non-orthologous sequence - P.jiroveci:232 P.troglodytes:232

L0P9M9              	100.00%		H2R1H7              	100.00%
Bootstrap support for L0P9M9 as seed ortholog is 100%.
Bootstrap support for H2R1H7 as seed ortholog is 100%.

Group of orthologs #664. Best score 232 bits
Score difference with first non-orthologous sequence - P.jiroveci:232 P.troglodytes:232

L0PDI2              	100.00%		H2RDJ5              	100.00%
Bootstrap support for L0PDI2 as seed ortholog is 100%.
Bootstrap support for H2RDJ5 as seed ortholog is 100%.

Group of orthologs #665. Best score 231 bits
Score difference with first non-orthologous sequence - P.jiroveci:231 P.troglodytes:63

L0PFZ1              	100.00%		H2Q6I3              	100.00%
                    	       		H2Q6I4              	46.48%
                    	       		H2R4N9              	6.69%
Bootstrap support for L0PFZ1 as seed ortholog is 100%.
Bootstrap support for H2Q6I3 as seed ortholog is 92%.

Group of orthologs #666. Best score 230 bits
Score difference with first non-orthologous sequence - P.jiroveci:230 P.troglodytes:230

L0PH55              	100.00%		G2HHG5              	100.00%
Bootstrap support for L0PH55 as seed ortholog is 100%.
Bootstrap support for G2HHG5 as seed ortholog is 100%.

Group of orthologs #667. Best score 230 bits
Score difference with first non-orthologous sequence - P.jiroveci:14 P.troglodytes:230

L0PIP5              	100.00%		H2RI28              	100.00%
Bootstrap support for L0PIP5 as seed ortholog is 57%.
Alternative seed ortholog is L0PC99 (14 bits away from this cluster)
Bootstrap support for H2RI28 as seed ortholog is 100%.

Group of orthologs #668. Best score 229 bits
Score difference with first non-orthologous sequence - P.jiroveci:229 P.troglodytes:153

L0P9I3              	100.00%		H2QJR3              	100.00%
Bootstrap support for L0P9I3 as seed ortholog is 100%.
Bootstrap support for H2QJR3 as seed ortholog is 99%.

Group of orthologs #669. Best score 228 bits
Score difference with first non-orthologous sequence - P.jiroveci:22 P.troglodytes:38

L0PFJ7              	100.00%		H2Q9I7              	100.00%
                    	       		H2QR05              	30.76%
Bootstrap support for L0PFJ7 as seed ortholog is 56%.
Alternative seed ortholog is L0PBC8 (22 bits away from this cluster)
Bootstrap support for H2Q9I7 as seed ortholog is 85%.

Group of orthologs #670. Best score 228 bits
Score difference with first non-orthologous sequence - P.jiroveci:228 P.troglodytes:96

L0PGL3              	100.00%		H2Q7Q3              	100.00%
Bootstrap support for L0PGL3 as seed ortholog is 100%.
Bootstrap support for H2Q7Q3 as seed ortholog is 98%.

Group of orthologs #671. Best score 228 bits
Score difference with first non-orthologous sequence - P.jiroveci:228 P.troglodytes:228

L0PD44              	100.00%		H2QCB0              	100.00%
Bootstrap support for L0PD44 as seed ortholog is 100%.
Bootstrap support for H2QCB0 as seed ortholog is 100%.

Group of orthologs #672. Best score 228 bits
Score difference with first non-orthologous sequence - P.jiroveci:228 P.troglodytes:130

L0PEQ4              	100.00%		H2QB71              	100.00%
Bootstrap support for L0PEQ4 as seed ortholog is 100%.
Bootstrap support for H2QB71 as seed ortholog is 99%.

Group of orthologs #673. Best score 228 bits
Score difference with first non-orthologous sequence - P.jiroveci:228 P.troglodytes:154

L0PDB9              	100.00%		H2R2U4              	100.00%
Bootstrap support for L0PDB9 as seed ortholog is 100%.
Bootstrap support for H2R2U4 as seed ortholog is 99%.

Group of orthologs #674. Best score 227 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 P.troglodytes:47

L0PGE5              	100.00%		H2QML4              	100.00%
                    	       		H2PZP2              	84.62%
                    	       		H2RH27              	65.68%
Bootstrap support for L0PGE5 as seed ortholog is 99%.
Bootstrap support for H2QML4 as seed ortholog is 97%.

Group of orthologs #675. Best score 227 bits
Score difference with first non-orthologous sequence - P.jiroveci:227 P.troglodytes:227

L0PBZ1              	100.00%		H2QFZ7              	100.00%
Bootstrap support for L0PBZ1 as seed ortholog is 100%.
Bootstrap support for H2QFZ7 as seed ortholog is 100%.

Group of orthologs #676. Best score 227 bits
Score difference with first non-orthologous sequence - P.jiroveci:227 P.troglodytes:227

L0PFW4              	100.00%		H2QP35              	100.00%
Bootstrap support for L0PFW4 as seed ortholog is 100%.
Bootstrap support for H2QP35 as seed ortholog is 100%.

Group of orthologs #677. Best score 226 bits
Score difference with first non-orthologous sequence - P.jiroveci:226 P.troglodytes:226

L0PCF4              	100.00%		H2PYY9              	100.00%
L0P926              	60.03%		
Bootstrap support for L0PCF4 as seed ortholog is 100%.
Bootstrap support for H2PYY9 as seed ortholog is 100%.

Group of orthologs #678. Best score 226 bits
Score difference with first non-orthologous sequence - P.jiroveci:226 P.troglodytes:120

L0PE21              	100.00%		H2QQE3              	100.00%
Bootstrap support for L0PE21 as seed ortholog is 100%.
Bootstrap support for H2QQE3 as seed ortholog is 99%.

Group of orthologs #679. Best score 225 bits
Score difference with first non-orthologous sequence - P.jiroveci:225 P.troglodytes:225

L0PE89              	100.00%		H2Q4P4              	100.00%
Bootstrap support for L0PE89 as seed ortholog is 100%.
Bootstrap support for H2Q4P4 as seed ortholog is 100%.

Group of orthologs #680. Best score 225 bits
Score difference with first non-orthologous sequence - P.jiroveci:225 P.troglodytes:225

L0PGY0              	100.00%		H2QEI4              	100.00%
Bootstrap support for L0PGY0 as seed ortholog is 100%.
Bootstrap support for H2QEI4 as seed ortholog is 100%.

Group of orthologs #681. Best score 225 bits
Score difference with first non-orthologous sequence - P.jiroveci:225 P.troglodytes:225

L0PEC6              	100.00%		H2R643              	100.00%
Bootstrap support for L0PEC6 as seed ortholog is 100%.
Bootstrap support for H2R643 as seed ortholog is 100%.

Group of orthologs #682. Best score 225 bits
Score difference with first non-orthologous sequence - P.jiroveci:225 P.troglodytes:225

L0PA86              	100.00%		H2REG6              	100.00%
Bootstrap support for L0PA86 as seed ortholog is 100%.
Bootstrap support for H2REG6 as seed ortholog is 100%.

Group of orthologs #683. Best score 224 bits
Score difference with first non-orthologous sequence - P.jiroveci:224 P.troglodytes:224

L0P968              	100.00%		H2QVP1              	100.00%
                    	       		H2Q6U5              	6.42%
Bootstrap support for L0P968 as seed ortholog is 100%.
Bootstrap support for H2QVP1 as seed ortholog is 100%.

Group of orthologs #684. Best score 224 bits
Score difference with first non-orthologous sequence - P.jiroveci:224 P.troglodytes:224

L0PG39              	100.00%		H2Q8M3              	100.00%
Bootstrap support for L0PG39 as seed ortholog is 100%.
Bootstrap support for H2Q8M3 as seed ortholog is 100%.

Group of orthologs #685. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 P.troglodytes:80

L0P848              	100.00%		H2QU47              	100.00%
L0P867              	89.62%		H2QDR0              	37.56%
Bootstrap support for L0P848 as seed ortholog is 100%.
Bootstrap support for H2QU47 as seed ortholog is 98%.

Group of orthologs #686. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 P.troglodytes:223

L0PA92              	100.00%		H2PXU3              	100.00%
L0P8X8              	40.95%		
Bootstrap support for L0PA92 as seed ortholog is 100%.
Bootstrap support for H2PXU3 as seed ortholog is 100%.

Group of orthologs #687. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 P.troglodytes:223

L0P901              	100.00%		G2HJ78              	100.00%
Bootstrap support for L0P901 as seed ortholog is 100%.
Bootstrap support for G2HJ78 as seed ortholog is 100%.

Group of orthologs #688. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 P.troglodytes:223

L0PCJ8              	100.00%		H2Q2P4              	100.00%
Bootstrap support for L0PCJ8 as seed ortholog is 100%.
Bootstrap support for H2Q2P4 as seed ortholog is 100%.

Group of orthologs #689. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 P.troglodytes:223

L0P705              	100.00%		H2QV18              	100.00%
Bootstrap support for L0P705 as seed ortholog is 100%.
Bootstrap support for H2QV18 as seed ortholog is 100%.

Group of orthologs #690. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:5 P.troglodytes:223

L0PD43              	100.00%		H2R667              	100.00%
Bootstrap support for L0PD43 as seed ortholog is 60%.
Alternative seed ortholog is L0PB48 (5 bits away from this cluster)
Bootstrap support for H2R667 as seed ortholog is 100%.

Group of orthologs #691. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 P.troglodytes:223

L0PGE7              	100.00%		H2R662              	100.00%
Bootstrap support for L0PGE7 as seed ortholog is 100%.
Bootstrap support for H2R662 as seed ortholog is 100%.

Group of orthologs #692. Best score 223 bits
Score difference with first non-orthologous sequence - P.jiroveci:223 P.troglodytes:223

L0PDP2              	100.00%		H2R9Q1              	100.00%
Bootstrap support for L0PDP2 as seed ortholog is 100%.
Bootstrap support for H2R9Q1 as seed ortholog is 100%.

Group of orthologs #693. Best score 222 bits
Score difference with first non-orthologous sequence - P.jiroveci:222 P.troglodytes:222

L0PI61              	100.00%		H2Q5W5              	100.00%
L0PA50              	18.89%		H2QVN0              	58.29%
                    	       		H2QDN6              	52.20%
Bootstrap support for L0PI61 as seed ortholog is 100%.
Bootstrap support for H2Q5W5 as seed ortholog is 100%.

Group of orthologs #694. Best score 222 bits
Score difference with first non-orthologous sequence - P.jiroveci:222 P.troglodytes:39

L0P8Q5              	100.00%		H2QCS0              	100.00%
Bootstrap support for L0P8Q5 as seed ortholog is 100%.
Bootstrap support for H2QCS0 as seed ortholog is 79%.

Group of orthologs #695. Best score 222 bits
Score difference with first non-orthologous sequence - P.jiroveci:222 P.troglodytes:222

L0PAE8              	100.00%		H2QEU6              	100.00%
Bootstrap support for L0PAE8 as seed ortholog is 100%.
Bootstrap support for H2QEU6 as seed ortholog is 100%.

Group of orthologs #696. Best score 222 bits
Score difference with first non-orthologous sequence - P.jiroveci:222 P.troglodytes:222

L0PA36              	100.00%		H2QM07              	100.00%
Bootstrap support for L0PA36 as seed ortholog is 100%.
Bootstrap support for H2QM07 as seed ortholog is 100%.

Group of orthologs #697. Best score 222 bits
Score difference with first non-orthologous sequence - P.jiroveci:222 P.troglodytes:222

L0PA05              	100.00%		H2QV80              	100.00%
Bootstrap support for L0PA05 as seed ortholog is 100%.
Bootstrap support for H2QV80 as seed ortholog is 100%.

Group of orthologs #698. Best score 221 bits
Score difference with first non-orthologous sequence - P.jiroveci:221 P.troglodytes:221

L0PG10              	100.00%		H2QAB0              	100.00%
                    	       		H2QAK2              	11.66%
Bootstrap support for L0PG10 as seed ortholog is 100%.
Bootstrap support for H2QAB0 as seed ortholog is 100%.

Group of orthologs #699. Best score 221 bits
Score difference with first non-orthologous sequence - P.jiroveci:221 P.troglodytes:221

L0PC20              	100.00%		H2QRQ3              	100.00%
                    	       		H2Q7P0              	29.62%
Bootstrap support for L0PC20 as seed ortholog is 100%.
Bootstrap support for H2QRQ3 as seed ortholog is 100%.

Group of orthologs #700. Best score 221 bits
Score difference with first non-orthologous sequence - P.jiroveci:221 P.troglodytes:221

L0PAJ0              	100.00%		H2R1J8              	100.00%
                    	       		H2Q8B5              	51.61%
Bootstrap support for L0PAJ0 as seed ortholog is 100%.
Bootstrap support for H2R1J8 as seed ortholog is 100%.

Group of orthologs #701. Best score 221 bits
Score difference with first non-orthologous sequence - P.jiroveci:221 P.troglodytes:126

L0PAL2              	100.00%		H2REW6              	100.00%
Bootstrap support for L0PAL2 as seed ortholog is 100%.
Bootstrap support for H2REW6 as seed ortholog is 99%.

Group of orthologs #702. Best score 220 bits
Score difference with first non-orthologous sequence - P.jiroveci:220 P.troglodytes:220

L0P9Q8              	100.00%		H2Q4A1              	100.00%
                    	       		H2QH56              	28.60%
                    	       		H2QLX9              	24.51%
Bootstrap support for L0P9Q8 as seed ortholog is 100%.
Bootstrap support for H2Q4A1 as seed ortholog is 100%.

Group of orthologs #703. Best score 220 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 P.troglodytes:101

L0PHW8              	100.00%		H2Q9M8              	100.00%
                    	       		H2QF84              	80.00%
                    	       		H2R0X3              	17.14%
Bootstrap support for L0PHW8 as seed ortholog is 100%.
Bootstrap support for H2Q9M8 as seed ortholog is 100%.

Group of orthologs #704. Best score 220 bits
Score difference with first non-orthologous sequence - P.jiroveci:220 P.troglodytes:220

L0PFR9              	100.00%		H2QIB4              	100.00%
Bootstrap support for L0PFR9 as seed ortholog is 100%.
Bootstrap support for H2QIB4 as seed ortholog is 100%.

Group of orthologs #705. Best score 220 bits
Score difference with first non-orthologous sequence - P.jiroveci:220 P.troglodytes:154

L0PBD5              	100.00%		H2R941              	100.00%
Bootstrap support for L0PBD5 as seed ortholog is 100%.
Bootstrap support for H2R941 as seed ortholog is 99%.

Group of orthologs #706. Best score 219 bits
Score difference with first non-orthologous sequence - P.jiroveci:219 P.troglodytes:219

L0PD58              	100.00%		H2Q7F6              	100.00%
Bootstrap support for L0PD58 as seed ortholog is 100%.
Bootstrap support for H2Q7F6 as seed ortholog is 100%.

Group of orthologs #707. Best score 219 bits
Score difference with first non-orthologous sequence - P.jiroveci:219 P.troglodytes:145

L0PGD9              	100.00%		H2QN04              	100.00%
Bootstrap support for L0PGD9 as seed ortholog is 100%.
Bootstrap support for H2QN04 as seed ortholog is 99%.

Group of orthologs #708. Best score 218 bits
Score difference with first non-orthologous sequence - P.jiroveci:218 P.troglodytes:101

L0PCI8              	100.00%		H2QPF3              	100.00%
                    	       		H2QRW4              	32.14%
                    	       		H2RHR8              	31.97%
Bootstrap support for L0PCI8 as seed ortholog is 100%.
Bootstrap support for H2QPF3 as seed ortholog is 99%.

Group of orthologs #709. Best score 218 bits
Score difference with first non-orthologous sequence - P.jiroveci:218 P.troglodytes:218

L0PBK8              	100.00%		H2QE73              	100.00%
Bootstrap support for L0PBK8 as seed ortholog is 100%.
Bootstrap support for H2QE73 as seed ortholog is 100%.

Group of orthologs #710. Best score 218 bits
Score difference with first non-orthologous sequence - P.jiroveci:218 P.troglodytes:218

L0PGJ8              	100.00%		H2QIT1              	100.00%
Bootstrap support for L0PGJ8 as seed ortholog is 100%.
Bootstrap support for H2QIT1 as seed ortholog is 100%.

Group of orthologs #711. Best score 217 bits
Score difference with first non-orthologous sequence - P.jiroveci:217 P.troglodytes:217

L0PDX6              	100.00%		H2QB47              	100.00%
Bootstrap support for L0PDX6 as seed ortholog is 100%.
Bootstrap support for H2QB47 as seed ortholog is 100%.

Group of orthologs #712. Best score 217 bits
Score difference with first non-orthologous sequence - P.jiroveci:217 P.troglodytes:217

L0PCU0              	100.00%		H2QI04              	100.00%
Bootstrap support for L0PCU0 as seed ortholog is 100%.
Bootstrap support for H2QI04 as seed ortholog is 100%.

Group of orthologs #713. Best score 217 bits
Score difference with first non-orthologous sequence - P.jiroveci:217 P.troglodytes:217

L0PDR1              	100.00%		H2QZU3              	100.00%
Bootstrap support for L0PDR1 as seed ortholog is 100%.
Bootstrap support for H2QZU3 as seed ortholog is 100%.

Group of orthologs #714. Best score 216 bits
Score difference with first non-orthologous sequence - P.jiroveci:216 P.troglodytes:216

L0PDL5              	100.00%		H2QK28              	100.00%
                    	       		G2HHR6              	76.52%
Bootstrap support for L0PDL5 as seed ortholog is 100%.
Bootstrap support for H2QK28 as seed ortholog is 100%.

Group of orthologs #715. Best score 216 bits
Score difference with first non-orthologous sequence - P.jiroveci:216 P.troglodytes:216

L0PGD6              	100.00%		H2QEY6              	100.00%
Bootstrap support for L0PGD6 as seed ortholog is 100%.
Bootstrap support for H2QEY6 as seed ortholog is 100%.

Group of orthologs #716. Best score 216 bits
Score difference with first non-orthologous sequence - P.jiroveci:140 P.troglodytes:50

L0PHH9              	100.00%		H2RIJ3              	100.00%
Bootstrap support for L0PHH9 as seed ortholog is 100%.
Bootstrap support for H2RIJ3 as seed ortholog is 98%.

Group of orthologs #717. Best score 215 bits
Score difference with first non-orthologous sequence - P.jiroveci:117 P.troglodytes:58

L0PDB8              	100.00%		H2PYT6              	100.00%
Bootstrap support for L0PDB8 as seed ortholog is 99%.
Bootstrap support for H2PYT6 as seed ortholog is 96%.

Group of orthologs #718. Best score 215 bits
Score difference with first non-orthologous sequence - P.jiroveci:215 P.troglodytes:215

L0PH54              	100.00%		H2QJZ3              	100.00%
Bootstrap support for L0PH54 as seed ortholog is 100%.
Bootstrap support for H2QJZ3 as seed ortholog is 100%.

Group of orthologs #719. Best score 215 bits
Score difference with first non-orthologous sequence - P.jiroveci:215 P.troglodytes:215

L0PFS1              	100.00%		H2R9B1              	100.00%
Bootstrap support for L0PFS1 as seed ortholog is 100%.
Bootstrap support for H2R9B1 as seed ortholog is 100%.

Group of orthologs #720. Best score 214 bits
Score difference with first non-orthologous sequence - P.jiroveci:214 P.troglodytes:214

L0PD65              	100.00%		H2QZN6              	100.00%
                    	       		H2QNQ9              	31.87%
Bootstrap support for L0PD65 as seed ortholog is 100%.
Bootstrap support for H2QZN6 as seed ortholog is 100%.

Group of orthologs #721. Best score 214 bits
Score difference with first non-orthologous sequence - P.jiroveci:214 P.troglodytes:138

L0PAW4              	100.00%		H2Q6N9              	100.00%
Bootstrap support for L0PAW4 as seed ortholog is 100%.
Bootstrap support for H2Q6N9 as seed ortholog is 100%.

Group of orthologs #722. Best score 214 bits
Score difference with first non-orthologous sequence - P.jiroveci:214 P.troglodytes:214

L0PFL8              	100.00%		H2RD77              	100.00%
Bootstrap support for L0PFL8 as seed ortholog is 100%.
Bootstrap support for H2RD77 as seed ortholog is 100%.

Group of orthologs #723. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:80 P.troglodytes:109

L0PDS3              	100.00%		H2Q0X6              	100.00%
                    	       		H2QLU4              	41.29%
                    	       		H2Q341              	35.07%
Bootstrap support for L0PDS3 as seed ortholog is 98%.
Bootstrap support for H2Q0X6 as seed ortholog is 99%.

Group of orthologs #724. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:212 P.troglodytes:212

L0P910              	100.00%		H2Q1J2              	100.00%
                    	       		H2Q1J1              	27.59%
Bootstrap support for L0P910 as seed ortholog is 100%.
Bootstrap support for H2Q1J2 as seed ortholog is 100%.

Group of orthologs #725. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:212 P.troglodytes:212

L0PC53              	100.00%		H2PYW3              	100.00%
Bootstrap support for L0PC53 as seed ortholog is 100%.
Bootstrap support for H2PYW3 as seed ortholog is 100%.

Group of orthologs #726. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:212 P.troglodytes:212

L0PEL2              	100.00%		H2Q0G1              	100.00%
Bootstrap support for L0PEL2 as seed ortholog is 100%.
Bootstrap support for H2Q0G1 as seed ortholog is 100%.

Group of orthologs #727. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:212 P.troglodytes:212

L0PFU0              	100.00%		H2Q7U8              	100.00%
Bootstrap support for L0PFU0 as seed ortholog is 100%.
Bootstrap support for H2Q7U8 as seed ortholog is 100%.

Group of orthologs #728. Best score 212 bits
Score difference with first non-orthologous sequence - P.jiroveci:212 P.troglodytes:212

L0PB11              	100.00%		H2RA61              	100.00%
Bootstrap support for L0PB11 as seed ortholog is 100%.
Bootstrap support for H2RA61 as seed ortholog is 100%.

Group of orthologs #729. Best score 211 bits
Score difference with first non-orthologous sequence - P.jiroveci:211 P.troglodytes:94

L0PG76              	100.00%		H2R460              	100.00%
L0PE70              	51.61%		
Bootstrap support for L0PG76 as seed ortholog is 100%.
Bootstrap support for H2R460 as seed ortholog is 99%.

Group of orthologs #730. Best score 210 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 P.troglodytes:87

L0PFN2              	100.00%		H2QHV8              	100.00%
                    	       		H2Q1K5              	60.92%
Bootstrap support for L0PFN2 as seed ortholog is 100%.
Bootstrap support for H2QHV8 as seed ortholog is 100%.

Group of orthologs #731. Best score 210 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 P.troglodytes:131

L0PDB2              	100.00%		G2HF98              	100.00%
Bootstrap support for L0PDB2 as seed ortholog is 99%.
Bootstrap support for G2HF98 as seed ortholog is 99%.

Group of orthologs #732. Best score 210 bits
Score difference with first non-orthologous sequence - P.jiroveci:210 P.troglodytes:210

L0PCB3              	100.00%		H2PZA5              	100.00%
Bootstrap support for L0PCB3 as seed ortholog is 100%.
Bootstrap support for H2PZA5 as seed ortholog is 100%.

Group of orthologs #733. Best score 210 bits
Score difference with first non-orthologous sequence - P.jiroveci:210 P.troglodytes:210

L0PAL5              	100.00%		H2QHR6              	100.00%
Bootstrap support for L0PAL5 as seed ortholog is 100%.
Bootstrap support for H2QHR6 as seed ortholog is 100%.

Group of orthologs #734. Best score 210 bits
Score difference with first non-orthologous sequence - P.jiroveci:210 P.troglodytes:210

L0P9U1              	100.00%		H2R5P6              	100.00%
Bootstrap support for L0P9U1 as seed ortholog is 100%.
Bootstrap support for H2R5P6 as seed ortholog is 100%.

Group of orthologs #735. Best score 209 bits
Score difference with first non-orthologous sequence - P.jiroveci:209 P.troglodytes:67

L0PCY2              	100.00%		H2Q155              	100.00%
                    	       		H2Q133              	5.56%
Bootstrap support for L0PCY2 as seed ortholog is 100%.
Bootstrap support for H2Q155 as seed ortholog is 84%.

Group of orthologs #736. Best score 209 bits
Score difference with first non-orthologous sequence - P.jiroveci:209 P.troglodytes:209

L0PFP0              	100.00%		H2Q2F3              	100.00%
                    	       		H2QPT0              	37.87%
Bootstrap support for L0PFP0 as seed ortholog is 100%.
Bootstrap support for H2Q2F3 as seed ortholog is 100%.

Group of orthologs #737. Best score 209 bits
Score difference with first non-orthologous sequence - P.jiroveci:209 P.troglodytes:209

L0P7B5              	100.00%		H2QPP1              	100.00%
                    	       		H2QI58              	57.21%
Bootstrap support for L0P7B5 as seed ortholog is 100%.
Bootstrap support for H2QPP1 as seed ortholog is 100%.

Group of orthologs #738. Best score 207 bits
Score difference with first non-orthologous sequence - P.jiroveci:207 P.troglodytes:75

L0PFI0              	100.00%		H2Q725              	100.00%
                    	       		H2QBX3              	34.62%
Bootstrap support for L0PFI0 as seed ortholog is 100%.
Bootstrap support for H2Q725 as seed ortholog is 95%.

Group of orthologs #739. Best score 207 bits
Score difference with first non-orthologous sequence - P.jiroveci:207 P.troglodytes:207

L0PB66              	100.00%		H2QAN1              	100.00%
Bootstrap support for L0PB66 as seed ortholog is 100%.
Bootstrap support for H2QAN1 as seed ortholog is 100%.

Group of orthologs #740. Best score 207 bits
Score difference with first non-orthologous sequence - P.jiroveci:207 P.troglodytes:207

L0P9K2              	100.00%		H2RIG4              	100.00%
Bootstrap support for L0P9K2 as seed ortholog is 100%.
Bootstrap support for H2RIG4 as seed ortholog is 100%.

Group of orthologs #741. Best score 206 bits
Score difference with first non-orthologous sequence - P.jiroveci:206 P.troglodytes:206

L0PAA3              	100.00%		H2QN96              	100.00%
                    	       		H2QM85              	44.33%
                    	       		H2R4E8              	23.50%
Bootstrap support for L0PAA3 as seed ortholog is 100%.
Bootstrap support for H2QN96 as seed ortholog is 100%.

Group of orthologs #742. Best score 206 bits
Score difference with first non-orthologous sequence - P.jiroveci:206 P.troglodytes:131

L0P839              	100.00%		H2QBY8              	100.00%
                    	       		H2QSR9              	22.18%
Bootstrap support for L0P839 as seed ortholog is 100%.
Bootstrap support for H2QBY8 as seed ortholog is 100%.

Group of orthologs #743. Best score 205 bits
Score difference with first non-orthologous sequence - P.jiroveci:205 P.troglodytes:205

L0P8Z2              	100.00%		H2RDH1              	100.00%
                    	       		A5A6K4              	98.56%
                    	       		H2QT58              	81.27%
Bootstrap support for L0P8Z2 as seed ortholog is 100%.
Bootstrap support for H2RDH1 as seed ortholog is 100%.

Group of orthologs #744. Best score 205 bits
Score difference with first non-orthologous sequence - P.jiroveci:205 P.troglodytes:205

L0PC18              	100.00%		H2QCU0              	100.00%
Bootstrap support for L0PC18 as seed ortholog is 100%.
Bootstrap support for H2QCU0 as seed ortholog is 100%.

Group of orthologs #745. Best score 205 bits
Score difference with first non-orthologous sequence - P.jiroveci:205 P.troglodytes:205

L0PFV3              	100.00%		H2Q8Y7              	100.00%
Bootstrap support for L0PFV3 as seed ortholog is 100%.
Bootstrap support for H2Q8Y7 as seed ortholog is 100%.

Group of orthologs #746. Best score 205 bits
Score difference with first non-orthologous sequence - P.jiroveci:127 P.troglodytes:129

L0PAZ8              	100.00%		H2QFG2              	100.00%
Bootstrap support for L0PAZ8 as seed ortholog is 99%.
Bootstrap support for H2QFG2 as seed ortholog is 99%.

Group of orthologs #747. Best score 205 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 P.troglodytes:40

L0PG51              	100.00%		H2R2N0              	100.00%
Bootstrap support for L0PG51 as seed ortholog is 97%.
Bootstrap support for H2R2N0 as seed ortholog is 86%.

Group of orthologs #748. Best score 205 bits
Score difference with first non-orthologous sequence - P.jiroveci:205 P.troglodytes:205

L0PBE8              	100.00%		Q2QD11              	100.00%
Bootstrap support for L0PBE8 as seed ortholog is 100%.
Bootstrap support for Q2QD11 as seed ortholog is 100%.

Group of orthologs #749. Best score 204 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 P.troglodytes:38

L0PCN5              	100.00%		H2Q120              	100.00%
L0P7B6              	92.67%		
Bootstrap support for L0PCN5 as seed ortholog is 93%.
Bootstrap support for H2Q120 as seed ortholog is 81%.

Group of orthologs #750. Best score 204 bits
Score difference with first non-orthologous sequence - P.jiroveci:204 P.troglodytes:204

L0PCH6              	100.00%		H2Q426              	100.00%
Bootstrap support for L0PCH6 as seed ortholog is 100%.
Bootstrap support for H2Q426 as seed ortholog is 100%.

Group of orthologs #751. Best score 203 bits
Score difference with first non-orthologous sequence - P.jiroveci:203 P.troglodytes:203

L0PBN7              	100.00%		H2PYN0              	100.00%
                    	       		H2QTM0              	12.74%
Bootstrap support for L0PBN7 as seed ortholog is 100%.
Bootstrap support for H2PYN0 as seed ortholog is 100%.

Group of orthologs #752. Best score 203 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 P.troglodytes:97

L0P7B1              	100.00%		H2R5C5              	100.00%
                    	       		H2QZ18              	89.19%
Bootstrap support for L0P7B1 as seed ortholog is 100%.
Bootstrap support for H2R5C5 as seed ortholog is 99%.

Group of orthologs #753. Best score 203 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 P.troglodytes:77

L0PAA8              	100.00%		G2HDU7              	100.00%
Bootstrap support for L0PAA8 as seed ortholog is 99%.
Bootstrap support for G2HDU7 as seed ortholog is 99%.

Group of orthologs #754. Best score 202 bits
Score difference with first non-orthologous sequence - P.jiroveci:202 P.troglodytes:104

L0PE03              	100.00%		H2QPX9              	100.00%
Bootstrap support for L0PE03 as seed ortholog is 100%.
Bootstrap support for H2QPX9 as seed ortholog is 99%.

Group of orthologs #755. Best score 201 bits
Score difference with first non-orthologous sequence - P.jiroveci:70 P.troglodytes:64

L0PGT4              	100.00%		H2Q1M3              	100.00%
                    	       		H2QM08              	60.56%
                    	       		H2QZ96              	29.93%
                    	       		H2QMM7              	16.02%
                    	       		H2QBD1              	14.08%
                    	       		H2QRB1              	12.15%
                    	       		H2QWD6              	8.80%
                    	       		H2QQ24              	5.63%
Bootstrap support for L0PGT4 as seed ortholog is 96%.
Bootstrap support for H2Q1M3 as seed ortholog is 94%.

Group of orthologs #756. Best score 201 bits
Score difference with first non-orthologous sequence - P.jiroveci:114 P.troglodytes:201

L0PFD8              	100.00%		H2QMK1              	100.00%
                    	       		H2QMM3              	23.83%
                    	       		H2QSU2              	17.79%
Bootstrap support for L0PFD8 as seed ortholog is 99%.
Bootstrap support for H2QMK1 as seed ortholog is 100%.

Group of orthologs #757. Best score 201 bits
Score difference with first non-orthologous sequence - P.jiroveci:201 P.troglodytes:201

L0PEB2              	100.00%		H2QSZ9              	100.00%
Bootstrap support for L0PEB2 as seed ortholog is 100%.
Bootstrap support for H2QSZ9 as seed ortholog is 100%.

Group of orthologs #758. Best score 201 bits
Score difference with first non-orthologous sequence - P.jiroveci:201 P.troglodytes:201

L0PD35              	100.00%		H2QV02              	100.00%
Bootstrap support for L0PD35 as seed ortholog is 100%.
Bootstrap support for H2QV02 as seed ortholog is 100%.

Group of orthologs #759. Best score 200 bits
Score difference with first non-orthologous sequence - P.jiroveci:200 P.troglodytes:41

L0PC02              	100.00%		H2R280              	100.00%
                    	       		H2PZY4              	46.08%
                    	       		H2QEZ4              	44.71%
Bootstrap support for L0PC02 as seed ortholog is 100%.
Bootstrap support for H2R280 as seed ortholog is 71%.
Alternative seed ortholog is H2Q1Q4 (41 bits away from this cluster)

Group of orthologs #760. Best score 200 bits
Score difference with first non-orthologous sequence - P.jiroveci:139 P.troglodytes:89

L0PAF0              	100.00%		H2QUV9              	100.00%
                    	       		H2QD69              	30.20%
Bootstrap support for L0PAF0 as seed ortholog is 99%.
Bootstrap support for H2QUV9 as seed ortholog is 98%.

Group of orthologs #761. Best score 200 bits
Score difference with first non-orthologous sequence - P.jiroveci:200 P.troglodytes:143

L0PDS6              	100.00%		H2PYI2              	100.00%
Bootstrap support for L0PDS6 as seed ortholog is 100%.
Bootstrap support for H2PYI2 as seed ortholog is 99%.

Group of orthologs #762. Best score 200 bits
Score difference with first non-orthologous sequence - P.jiroveci:200 P.troglodytes:200

L0P7L9              	100.00%		H2QBV6              	100.00%
Bootstrap support for L0P7L9 as seed ortholog is 100%.
Bootstrap support for H2QBV6 as seed ortholog is 100%.

Group of orthologs #763. Best score 200 bits
Score difference with first non-orthologous sequence - P.jiroveci:200 P.troglodytes:200

L0PGT2              	100.00%		H2QCI0              	100.00%
Bootstrap support for L0PGT2 as seed ortholog is 100%.
Bootstrap support for H2QCI0 as seed ortholog is 100%.

Group of orthologs #764. Best score 200 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 P.troglodytes:37

L0PDN2              	100.00%		H2QLF1              	100.00%
Bootstrap support for L0PDN2 as seed ortholog is 97%.
Bootstrap support for H2QLF1 as seed ortholog is 80%.

Group of orthologs #765. Best score 200 bits
Score difference with first non-orthologous sequence - P.jiroveci:200 P.troglodytes:200

L0PHL1              	100.00%		H2QR68              	100.00%
Bootstrap support for L0PHL1 as seed ortholog is 100%.
Bootstrap support for H2QR68 as seed ortholog is 100%.

Group of orthologs #766. Best score 200 bits
Score difference with first non-orthologous sequence - P.jiroveci:200 P.troglodytes:200

L0PBD4              	100.00%		H2R6V8              	100.00%
Bootstrap support for L0PBD4 as seed ortholog is 100%.
Bootstrap support for H2R6V8 as seed ortholog is 100%.

Group of orthologs #767. Best score 199 bits
Score difference with first non-orthologous sequence - P.jiroveci:199 P.troglodytes:199

L0PDJ6              	100.00%		H2Q226              	100.00%
                    	       		H2QPY2              	32.33%
                    	       		H2QRL4              	12.68%
Bootstrap support for L0PDJ6 as seed ortholog is 100%.
Bootstrap support for H2Q226 as seed ortholog is 100%.

Group of orthologs #768. Best score 199 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 P.troglodytes:77

L0P9Z5              	100.00%		H2PYH2              	100.00%
Bootstrap support for L0P9Z5 as seed ortholog is 99%.
Bootstrap support for H2PYH2 as seed ortholog is 95%.

Group of orthologs #769. Best score 199 bits
Score difference with first non-orthologous sequence - P.jiroveci:199 P.troglodytes:199

L0PAC1              	100.00%		H2QFS0              	100.00%
Bootstrap support for L0PAC1 as seed ortholog is 100%.
Bootstrap support for H2QFS0 as seed ortholog is 100%.

Group of orthologs #770. Best score 199 bits
Score difference with first non-orthologous sequence - P.jiroveci:199 P.troglodytes:199

L0P9I0              	100.00%		H2RGK0              	100.00%
Bootstrap support for L0P9I0 as seed ortholog is 100%.
Bootstrap support for H2RGK0 as seed ortholog is 100%.

Group of orthologs #771. Best score 199 bits
Score difference with first non-orthologous sequence - P.jiroveci:199 P.troglodytes:199

L0PHH2              	100.00%		H2R8F3              	100.00%
Bootstrap support for L0PHH2 as seed ortholog is 100%.
Bootstrap support for H2R8F3 as seed ortholog is 100%.

Group of orthologs #772. Best score 198 bits
Score difference with first non-orthologous sequence - P.jiroveci:198 P.troglodytes:198

L0P9D6              	100.00%		H2Q592              	100.00%
                    	       		Q0MQB4              	100.00%
Bootstrap support for L0P9D6 as seed ortholog is 100%.
Bootstrap support for H2Q592 as seed ortholog is 100%.
Bootstrap support for Q0MQB4 as seed ortholog is 100%.

Group of orthologs #773. Best score 198 bits
Score difference with first non-orthologous sequence - P.jiroveci:198 P.troglodytes:198

L0PAR5              	100.00%		H2QLX4              	100.00%
Bootstrap support for L0PAR5 as seed ortholog is 100%.
Bootstrap support for H2QLX4 as seed ortholog is 100%.

Group of orthologs #774. Best score 198 bits
Score difference with first non-orthologous sequence - P.jiroveci:198 P.troglodytes:198

L0PCK9              	100.00%		H2QXP6              	100.00%
Bootstrap support for L0PCK9 as seed ortholog is 100%.
Bootstrap support for H2QXP6 as seed ortholog is 100%.

Group of orthologs #775. Best score 197 bits
Score difference with first non-orthologous sequence - P.jiroveci:197 P.troglodytes:16

L0PG16              	100.00%		H2QME0              	100.00%
                    	       		H2QL37              	6.55%
                    	       		H2Q159              	5.44%
Bootstrap support for L0PG16 as seed ortholog is 100%.
Bootstrap support for H2QME0 as seed ortholog is 68%.
Alternative seed ortholog is Q68UT7 (16 bits away from this cluster)

Group of orthologs #776. Best score 196 bits
Score difference with first non-orthologous sequence - P.jiroveci:137 P.troglodytes:67

L0PCC3              	100.00%		G2HJF5              	100.00%
                    	       		H2QM62              	72.88%
                    	       		H2Q672              	71.19%
Bootstrap support for L0PCC3 as seed ortholog is 99%.
Bootstrap support for G2HJF5 as seed ortholog is 99%.

Group of orthologs #777. Best score 196 bits
Score difference with first non-orthologous sequence - P.jiroveci:196 P.troglodytes:143

L0PBL5              	100.00%		H2RI35              	100.00%
                    	       		H2QLM4              	12.58%
Bootstrap support for L0PBL5 as seed ortholog is 100%.
Bootstrap support for H2RI35 as seed ortholog is 99%.

Group of orthologs #778. Best score 196 bits
Score difference with first non-orthologous sequence - P.jiroveci:196 P.troglodytes:94

L0PA51              	100.00%		H2QHC5              	100.00%
Bootstrap support for L0PA51 as seed ortholog is 100%.
Bootstrap support for H2QHC5 as seed ortholog is 99%.

Group of orthologs #779. Best score 196 bits
Score difference with first non-orthologous sequence - P.jiroveci:196 P.troglodytes:112

L0PF75              	100.00%		H2QK95              	100.00%
Bootstrap support for L0PF75 as seed ortholog is 100%.
Bootstrap support for H2QK95 as seed ortholog is 99%.

Group of orthologs #780. Best score 196 bits
Score difference with first non-orthologous sequence - P.jiroveci:196 P.troglodytes:196

L0PDJ4              	100.00%		H2R9J0              	100.00%
Bootstrap support for L0PDJ4 as seed ortholog is 100%.
Bootstrap support for H2R9J0 as seed ortholog is 100%.

Group of orthologs #781. Best score 195 bits
Score difference with first non-orthologous sequence - P.jiroveci:195 P.troglodytes:195

L0P9Z4              	100.00%		H2QQQ1              	100.00%
                    	       		H2R8P1              	48.74%
Bootstrap support for L0P9Z4 as seed ortholog is 100%.
Bootstrap support for H2QQQ1 as seed ortholog is 100%.

Group of orthologs #782. Best score 195 bits
Score difference with first non-orthologous sequence - P.jiroveci:195 P.troglodytes:140

L0PAJ6              	100.00%		H2PYE7              	100.00%
Bootstrap support for L0PAJ6 as seed ortholog is 100%.
Bootstrap support for H2PYE7 as seed ortholog is 100%.

Group of orthologs #783. Best score 195 bits
Score difference with first non-orthologous sequence - P.jiroveci:195 P.troglodytes:195

L0PC50              	100.00%		H2Q990              	100.00%
Bootstrap support for L0PC50 as seed ortholog is 100%.
Bootstrap support for H2Q990 as seed ortholog is 100%.

Group of orthologs #784. Best score 195 bits
Score difference with first non-orthologous sequence - P.jiroveci:195 P.troglodytes:195

L0PHT7              	100.00%		H2QTA5              	100.00%
Bootstrap support for L0PHT7 as seed ortholog is 100%.
Bootstrap support for H2QTA5 as seed ortholog is 100%.

Group of orthologs #785. Best score 194 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 P.troglodytes:68

L0PAY4              	100.00%		H2QSG1              	100.00%
                    	       		H2Q1A3              	96.72%
                    	       		H2R8P7              	96.72%
                    	       		H2QSF5              	95.08%
                    	       		H2R1N8              	95.08%
                    	       		H2Q5I5              	93.44%
                    	       		H2QSG5              	93.44%
                    	       		H2R3E3              	88.52%
                    	       		H2QSI6              	86.89%
                    	       		H2QSI5              	80.33%
                    	       		H2R8P5              	78.69%
                    	       		H2QSE5              	75.41%
                    	       		H2RG51              	70.49%
                    	       		H2Q4X7              	55.74%
Bootstrap support for L0PAY4 as seed ortholog is 100%.
Bootstrap support for H2QSG1 as seed ortholog is 99%.

Group of orthologs #786. Best score 194 bits
Score difference with first non-orthologous sequence - P.jiroveci:194 P.troglodytes:194

L0P9Y2              	100.00%		H2QGV2              	100.00%
Bootstrap support for L0P9Y2 as seed ortholog is 100%.
Bootstrap support for H2QGV2 as seed ortholog is 100%.

Group of orthologs #787. Best score 194 bits
Score difference with first non-orthologous sequence - P.jiroveci:194 P.troglodytes:140

L0P919              	100.00%		H2QQ35              	100.00%
Bootstrap support for L0P919 as seed ortholog is 100%.
Bootstrap support for H2QQ35 as seed ortholog is 100%.

Group of orthologs #788. Best score 194 bits
Score difference with first non-orthologous sequence - P.jiroveci:194 P.troglodytes:81

L0PD63              	100.00%		H2RH04              	100.00%
Bootstrap support for L0PD63 as seed ortholog is 100%.
Bootstrap support for H2RH04 as seed ortholog is 99%.

Group of orthologs #789. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:193 P.troglodytes:193

L0PGJ6              	100.00%		H2QV04              	100.00%
                    	       		H2QDS1              	18.32%
Bootstrap support for L0PGJ6 as seed ortholog is 100%.
Bootstrap support for H2QV04 as seed ortholog is 100%.

Group of orthologs #790. Best score 193 bits
Score difference with first non-orthologous sequence - P.jiroveci:193 P.troglodytes:193

L0PFH3              	100.00%		H2QFB0              	100.00%
Bootstrap support for L0PFH3 as seed ortholog is 100%.
Bootstrap support for H2QFB0 as seed ortholog is 100%.

Group of orthologs #791. Best score 192 bits
Score difference with first non-orthologous sequence - P.jiroveci:138 P.troglodytes:58

L0PIS9              	100.00%		G2HFP6              	100.00%
                    	       		H2RF85              	42.86%
                    	       		H2QHK2              	38.39%
                    	       		H2Q047              	33.04%
                    	       		H2QHZ8              	16.52%
                    	       		H2Q460              	12.50%
                    	       		H2QFS9              	8.04%
                    	       		H2QFD5              	7.14%
                    	       		H2QQY1              	6.70%
Bootstrap support for L0PIS9 as seed ortholog is 100%.
Bootstrap support for G2HFP6 as seed ortholog is 98%.

Group of orthologs #792. Best score 192 bits
Score difference with first non-orthologous sequence - P.jiroveci:192 P.troglodytes:192

L0P9Y7              	100.00%		H2Q4X6              	100.00%
Bootstrap support for L0P9Y7 as seed ortholog is 100%.
Bootstrap support for H2Q4X6 as seed ortholog is 100%.

Group of orthologs #793. Best score 191 bits
Score difference with first non-orthologous sequence - P.jiroveci:191 P.troglodytes:52

L0PEN4              	100.00%		H2Q5Q3              	100.00%
Bootstrap support for L0PEN4 as seed ortholog is 100%.
Bootstrap support for H2Q5Q3 as seed ortholog is 84%.

Group of orthologs #794. Best score 191 bits
Score difference with first non-orthologous sequence - P.jiroveci:191 P.troglodytes:191

L0PGX9              	100.00%		H2R5C6              	100.00%
Bootstrap support for L0PGX9 as seed ortholog is 100%.
Bootstrap support for H2R5C6 as seed ortholog is 100%.

Group of orthologs #795. Best score 190 bits
Score difference with first non-orthologous sequence - P.jiroveci:190 P.troglodytes:190

L0PBL3              	100.00%		H2R4U8              	100.00%
                    	       		H2Q5U6              	30.38%
                    	       		H2QJF7              	24.52%
Bootstrap support for L0PBL3 as seed ortholog is 100%.
Bootstrap support for H2R4U8 as seed ortholog is 100%.

Group of orthologs #796. Best score 190 bits
Score difference with first non-orthologous sequence - P.jiroveci:190 P.troglodytes:190

L0PBB0              	100.00%		H2QMS2              	100.00%
Bootstrap support for L0PBB0 as seed ortholog is 100%.
Bootstrap support for H2QMS2 as seed ortholog is 100%.

Group of orthologs #797. Best score 189 bits
Score difference with first non-orthologous sequence - P.jiroveci:189 P.troglodytes:189

L0PH33              	100.00%		H2QDP6              	100.00%
                    	       		H2R545              	69.88%
                    	       		H2QWD9              	24.36%
                    	       		H2RCB1              	23.41%
                    	       		H2R2Z9              	20.20%
                    	       		H2R1E1              	20.20%
Bootstrap support for L0PH33 as seed ortholog is 100%.
Bootstrap support for H2QDP6 as seed ortholog is 100%.

Group of orthologs #798. Best score 189 bits
Score difference with first non-orthologous sequence - P.jiroveci:189 P.troglodytes:189

L0PD76              	100.00%		H2PXV9              	100.00%
Bootstrap support for L0PD76 as seed ortholog is 100%.
Bootstrap support for H2PXV9 as seed ortholog is 100%.

Group of orthologs #799. Best score 189 bits
Score difference with first non-orthologous sequence - P.jiroveci:189 P.troglodytes:189

L0PG84              	100.00%		H2PY69              	100.00%
Bootstrap support for L0PG84 as seed ortholog is 100%.
Bootstrap support for H2PY69 as seed ortholog is 100%.

Group of orthologs #800. Best score 189 bits
Score difference with first non-orthologous sequence - P.jiroveci:189 P.troglodytes:92

L0PE77              	100.00%		H2QER3              	100.00%
Bootstrap support for L0PE77 as seed ortholog is 100%.
Bootstrap support for H2QER3 as seed ortholog is 99%.

Group of orthologs #801. Best score 189 bits
Score difference with first non-orthologous sequence - P.jiroveci:189 P.troglodytes:189

L0PB31              	100.00%		H2QJG4              	100.00%
Bootstrap support for L0PB31 as seed ortholog is 100%.
Bootstrap support for H2QJG4 as seed ortholog is 100%.

Group of orthologs #802. Best score 189 bits
Score difference with first non-orthologous sequence - P.jiroveci:189 P.troglodytes:94

L0PA07              	100.00%		H2R9F7              	100.00%
Bootstrap support for L0PA07 as seed ortholog is 100%.
Bootstrap support for H2R9F7 as seed ortholog is 99%.

Group of orthologs #803. Best score 188 bits
Score difference with first non-orthologous sequence - P.jiroveci:188 P.troglodytes:188

L0PFK7              	100.00%		H2Q291              	100.00%
                    	       		H2R312              	42.79%
                    	       		H2QRZ1              	39.71%
Bootstrap support for L0PFK7 as seed ortholog is 100%.
Bootstrap support for H2Q291 as seed ortholog is 100%.

Group of orthologs #804. Best score 188 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 P.troglodytes:115

L0PD33              	100.00%		H2Q9K4              	100.00%
                    	       		H2R5G0              	47.79%
Bootstrap support for L0PD33 as seed ortholog is 99%.
Bootstrap support for H2Q9K4 as seed ortholog is 99%.

Group of orthologs #805. Best score 188 bits
Score difference with first non-orthologous sequence - P.jiroveci:188 P.troglodytes:188

L0P6S2              	100.00%		H2QQP1              	100.00%
Bootstrap support for L0P6S2 as seed ortholog is 100%.
Bootstrap support for H2QQP1 as seed ortholog is 100%.

Group of orthologs #806. Best score 188 bits
Score difference with first non-orthologous sequence - P.jiroveci:188 P.troglodytes:188

L0PFC3              	100.00%		H2R726              	100.00%
Bootstrap support for L0PFC3 as seed ortholog is 100%.
Bootstrap support for H2R726 as seed ortholog is 100%.

Group of orthologs #807. Best score 187 bits
Score difference with first non-orthologous sequence - P.jiroveci:187 P.troglodytes:187

L0PE09              	100.00%		H2Q098              	100.00%
                    	       		H2RBN2              	10.89%
Bootstrap support for L0PE09 as seed ortholog is 100%.
Bootstrap support for H2Q098 as seed ortholog is 100%.

Group of orthologs #808. Best score 186 bits
Score difference with first non-orthologous sequence - P.jiroveci:186 P.troglodytes:186

L0PE05              	100.00%		H2QWV7              	100.00%
Bootstrap support for L0PE05 as seed ortholog is 100%.
Bootstrap support for H2QWV7 as seed ortholog is 100%.

Group of orthologs #809. Best score 186 bits
Score difference with first non-orthologous sequence - P.jiroveci:186 P.troglodytes:186

L0PE85              	100.00%		H2REW5              	100.00%
Bootstrap support for L0PE85 as seed ortholog is 100%.
Bootstrap support for H2REW5 as seed ortholog is 100%.

Group of orthologs #810. Best score 185 bits
Score difference with first non-orthologous sequence - P.jiroveci:185 P.troglodytes:185

L0PBL8              	100.00%		H2Q6F6              	100.00%
L0PDU3              	68.44%		
Bootstrap support for L0PBL8 as seed ortholog is 100%.
Bootstrap support for H2Q6F6 as seed ortholog is 100%.

Group of orthologs #811. Best score 185 bits
Score difference with first non-orthologous sequence - P.jiroveci:185 P.troglodytes:108

L0PFZ6              	100.00%		H2Q7S6              	100.00%
L0P7L2              	96.02%		
Bootstrap support for L0PFZ6 as seed ortholog is 100%.
Bootstrap support for H2Q7S6 as seed ortholog is 99%.

Group of orthologs #812. Best score 185 bits
Score difference with first non-orthologous sequence - P.jiroveci:185 P.troglodytes:185

L0PAM3              	100.00%		H2QI35              	100.00%
Bootstrap support for L0PAM3 as seed ortholog is 100%.
Bootstrap support for H2QI35 as seed ortholog is 100%.

Group of orthologs #813. Best score 185 bits
Score difference with first non-orthologous sequence - P.jiroveci:185 P.troglodytes:185

L0PEK7              	100.00%		H2QNB2              	100.00%
Bootstrap support for L0PEK7 as seed ortholog is 100%.
Bootstrap support for H2QNB2 as seed ortholog is 100%.

Group of orthologs #814. Best score 185 bits
Score difference with first non-orthologous sequence - P.jiroveci:130 P.troglodytes:185

L0PC80              	100.00%		H2QUI3              	100.00%
Bootstrap support for L0PC80 as seed ortholog is 100%.
Bootstrap support for H2QUI3 as seed ortholog is 100%.

Group of orthologs #815. Best score 185 bits
Score difference with first non-orthologous sequence - P.jiroveci:185 P.troglodytes:185

L0P8C9              	100.00%		H2R2Y8              	100.00%
Bootstrap support for L0P8C9 as seed ortholog is 100%.
Bootstrap support for H2R2Y8 as seed ortholog is 100%.

Group of orthologs #816. Best score 184 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 P.troglodytes:45

L0P8M4              	100.00%		H2QXT2              	100.00%
                    	       		G2HDW3              	26.09%
                    	       		H2Q7Y3              	24.11%
                    	       		H2RDR2              	8.70%
Bootstrap support for L0P8M4 as seed ortholog is 100%.
Bootstrap support for H2QXT2 as seed ortholog is 93%.

Group of orthologs #817. Best score 184 bits
Score difference with first non-orthologous sequence - P.jiroveci:184 P.troglodytes:87

L0PDE4              	100.00%		H2QC05              	100.00%
                    	       		H2QLD0              	50.80%
Bootstrap support for L0PDE4 as seed ortholog is 100%.
Bootstrap support for H2QC05 as seed ortholog is 99%.

Group of orthologs #818. Best score 184 bits
Score difference with first non-orthologous sequence - P.jiroveci:184 P.troglodytes:184

L0PC96              	100.00%		H2QBR4              	100.00%
Bootstrap support for L0PC96 as seed ortholog is 100%.
Bootstrap support for H2QBR4 as seed ortholog is 100%.

Group of orthologs #819. Best score 183 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 P.troglodytes:49

L0PAP9              	100.00%		H2QYC2              	100.00%
                    	       		H2QV48              	76.92%
                    	       		H2R8H7              	50.00%
Bootstrap support for L0PAP9 as seed ortholog is 100%.
Bootstrap support for H2QYC2 as seed ortholog is 99%.

Group of orthologs #820. Best score 183 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 P.troglodytes:52

L0PAS2              	100.00%		H2Q6L8              	100.00%
                    	       		H2R4I1              	72.66%
Bootstrap support for L0PAS2 as seed ortholog is 99%.
Bootstrap support for H2Q6L8 as seed ortholog is 98%.

Group of orthologs #821. Best score 183 bits
Score difference with first non-orthologous sequence - P.jiroveci:183 P.troglodytes:183

L0PCE0              	100.00%		H2QVA9              	100.00%
Bootstrap support for L0PCE0 as seed ortholog is 100%.
Bootstrap support for H2QVA9 as seed ortholog is 100%.

Group of orthologs #822. Best score 182 bits
Score difference with first non-orthologous sequence - P.jiroveci:182 P.troglodytes:182

L0PGR5              	100.00%		H2QM96              	100.00%
                    	       		H2QMI1              	5.04%
Bootstrap support for L0PGR5 as seed ortholog is 100%.
Bootstrap support for H2QM96 as seed ortholog is 100%.

Group of orthologs #823. Best score 181 bits
Score difference with first non-orthologous sequence - P.jiroveci:181 P.troglodytes:117

L0PD97              	100.00%		H2Q3G0              	100.00%
                    	       		H2QBM0              	11.09%
                    	       		H2QXI5              	7.39%
Bootstrap support for L0PD97 as seed ortholog is 100%.
Bootstrap support for H2Q3G0 as seed ortholog is 99%.

Group of orthologs #824. Best score 181 bits
Score difference with first non-orthologous sequence - P.jiroveci:181 P.troglodytes:181

L0PC06              	100.00%		H2QF44              	100.00%
Bootstrap support for L0PC06 as seed ortholog is 100%.
Bootstrap support for H2QF44 as seed ortholog is 100%.

Group of orthologs #825. Best score 181 bits
Score difference with first non-orthologous sequence - P.jiroveci:181 P.troglodytes:181

L0PB62              	100.00%		H2QQ85              	100.00%
Bootstrap support for L0PB62 as seed ortholog is 100%.
Bootstrap support for H2QQ85 as seed ortholog is 100%.

Group of orthologs #826. Best score 181 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 P.troglodytes:181

L0PEG1              	100.00%		H2QXX9              	100.00%
Bootstrap support for L0PEG1 as seed ortholog is 99%.
Bootstrap support for H2QXX9 as seed ortholog is 100%.

Group of orthologs #827. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 P.troglodytes:180

L0PGW6              	100.00%		H2QTX8              	100.00%
                    	       		H2Q7H2              	21.49%
Bootstrap support for L0PGW6 as seed ortholog is 100%.
Bootstrap support for H2QTX8 as seed ortholog is 100%.

Group of orthologs #828. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 P.troglodytes:40

L0PGT3              	100.00%		H2RD52              	100.00%
                    	       		H2Q2I0              	5.18%
Bootstrap support for L0PGT3 as seed ortholog is 100%.
Bootstrap support for H2RD52 as seed ortholog is 95%.

Group of orthologs #829. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 P.troglodytes:73

L0P838              	100.00%		H2QAB2              	100.00%
Bootstrap support for L0P838 as seed ortholog is 100%.
Bootstrap support for H2QAB2 as seed ortholog is 96%.

Group of orthologs #830. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 P.troglodytes:36

L0PBS7              	100.00%		H2Q7C0              	100.00%
Bootstrap support for L0PBS7 as seed ortholog is 100%.
Bootstrap support for H2Q7C0 as seed ortholog is 77%.

Group of orthologs #831. Best score 180 bits
Score difference with first non-orthologous sequence - P.jiroveci:180 P.troglodytes:8

L0PAV2              	100.00%		H2R6J1              	100.00%
Bootstrap support for L0PAV2 as seed ortholog is 100%.
Bootstrap support for H2R6J1 as seed ortholog is 49%.
Alternative seed ortholog is H2QDH9 (8 bits away from this cluster)

Group of orthologs #832. Best score 179 bits
Score difference with first non-orthologous sequence - P.jiroveci:179 P.troglodytes:179

L0PEB9              	100.00%		H2QIZ3              	100.00%
L0PA79              	57.79%		
Bootstrap support for L0PEB9 as seed ortholog is 100%.
Bootstrap support for H2QIZ3 as seed ortholog is 100%.

Group of orthologs #833. Best score 179 bits
Score difference with first non-orthologous sequence - P.jiroveci:179 P.troglodytes:179

L0PE97              	100.00%		A5A6I3              	100.00%
Bootstrap support for L0PE97 as seed ortholog is 100%.
Bootstrap support for A5A6I3 as seed ortholog is 100%.

Group of orthologs #834. Best score 179 bits
Score difference with first non-orthologous sequence - P.jiroveci:179 P.troglodytes:61

L0PDG6              	100.00%		G2HIB0              	100.00%
Bootstrap support for L0PDG6 as seed ortholog is 100%.
Bootstrap support for G2HIB0 as seed ortholog is 94%.

Group of orthologs #835. Best score 179 bits
Score difference with first non-orthologous sequence - P.jiroveci:179 P.troglodytes:179

L0PFD7              	100.00%		H2Q1M8              	100.00%
Bootstrap support for L0PFD7 as seed ortholog is 100%.
Bootstrap support for H2Q1M8 as seed ortholog is 100%.

Group of orthologs #836. Best score 179 bits
Score difference with first non-orthologous sequence - P.jiroveci:179 P.troglodytes:179

L0PAR2              	100.00%		H2QWL6              	100.00%
Bootstrap support for L0PAR2 as seed ortholog is 100%.
Bootstrap support for H2QWL6 as seed ortholog is 100%.

Group of orthologs #837. Best score 179 bits
Score difference with first non-orthologous sequence - P.jiroveci:179 P.troglodytes:179

L0PBJ0              	100.00%		H2RCP2              	100.00%
Bootstrap support for L0PBJ0 as seed ortholog is 100%.
Bootstrap support for H2RCP2 as seed ortholog is 100%.

Group of orthologs #838. Best score 178 bits
Score difference with first non-orthologous sequence - P.jiroveci:178 P.troglodytes:178

L0PCF8              	100.00%		H2R8Q8              	100.00%
                    	       		H2QS45              	65.83%
Bootstrap support for L0PCF8 as seed ortholog is 100%.
Bootstrap support for H2R8Q8 as seed ortholog is 100%.

Group of orthologs #839. Best score 178 bits
Score difference with first non-orthologous sequence - P.jiroveci:100 P.troglodytes:99

L0P7L3              	100.00%		H2Q9W3              	100.00%
Bootstrap support for L0P7L3 as seed ortholog is 99%.
Bootstrap support for H2Q9W3 as seed ortholog is 99%.

Group of orthologs #840. Best score 178 bits
Score difference with first non-orthologous sequence - P.jiroveci:178 P.troglodytes:178

L0PC68              	100.00%		H2QBF5              	100.00%
Bootstrap support for L0PC68 as seed ortholog is 100%.
Bootstrap support for H2QBF5 as seed ortholog is 100%.

Group of orthologs #841. Best score 178 bits
Score difference with first non-orthologous sequence - P.jiroveci:178 P.troglodytes:178

L0PBM3              	100.00%		H2QW58              	100.00%
Bootstrap support for L0PBM3 as seed ortholog is 100%.
Bootstrap support for H2QW58 as seed ortholog is 100%.

Group of orthologs #842. Best score 178 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 P.troglodytes:92

L0PB17              	100.00%		H2RA64              	100.00%
Bootstrap support for L0PB17 as seed ortholog is 99%.
Bootstrap support for H2RA64 as seed ortholog is 99%.

Group of orthologs #843. Best score 178 bits
Score difference with first non-orthologous sequence - P.jiroveci:178 P.troglodytes:30

L0PCI0              	100.00%		H2RB95              	100.00%
Bootstrap support for L0PCI0 as seed ortholog is 100%.
Bootstrap support for H2RB95 as seed ortholog is 84%.

Group of orthologs #844. Best score 177 bits
Score difference with first non-orthologous sequence - P.jiroveci:177 P.troglodytes:177

L0P8D5              	100.00%		H2Q112              	100.00%
Bootstrap support for L0P8D5 as seed ortholog is 100%.
Bootstrap support for H2Q112 as seed ortholog is 100%.

Group of orthologs #845. Best score 177 bits
Score difference with first non-orthologous sequence - P.jiroveci:177 P.troglodytes:106

L0PBU8              	100.00%		H2PZH9              	100.00%
Bootstrap support for L0PBU8 as seed ortholog is 100%.
Bootstrap support for H2PZH9 as seed ortholog is 98%.

Group of orthologs #846. Best score 177 bits
Score difference with first non-orthologous sequence - P.jiroveci:177 P.troglodytes:177

L0PDW5              	100.00%		H2Q6T5              	100.00%
Bootstrap support for L0PDW5 as seed ortholog is 100%.
Bootstrap support for H2Q6T5 as seed ortholog is 100%.

Group of orthologs #847. Best score 176 bits
Score difference with first non-orthologous sequence - P.jiroveci:176 P.troglodytes:176

L0PCG0              	100.00%		H2QT09              	100.00%
Bootstrap support for L0PCG0 as seed ortholog is 100%.
Bootstrap support for H2QT09 as seed ortholog is 100%.

Group of orthologs #848. Best score 176 bits
Score difference with first non-orthologous sequence - P.jiroveci:176 P.troglodytes:176

L0PEA1              	100.00%		H2QTH5              	100.00%
Bootstrap support for L0PEA1 as seed ortholog is 100%.
Bootstrap support for H2QTH5 as seed ortholog is 100%.

Group of orthologs #849. Best score 175 bits
Score difference with first non-orthologous sequence - P.jiroveci:175 P.troglodytes:175

L0PB81              	100.00%		Q5R1X0              	100.00%
                    	       		H2Q351              	97.10%
                    	       		H2RBK4              	94.93%
Bootstrap support for L0PB81 as seed ortholog is 100%.
Bootstrap support for Q5R1X0 as seed ortholog is 100%.

Group of orthologs #850. Best score 175 bits
Score difference with first non-orthologous sequence - P.jiroveci:175 P.troglodytes:175

L0PHR2              	100.00%		H2PYP1              	100.00%
Bootstrap support for L0PHR2 as seed ortholog is 100%.
Bootstrap support for H2PYP1 as seed ortholog is 100%.

Group of orthologs #851. Best score 175 bits
Score difference with first non-orthologous sequence - P.jiroveci:175 P.troglodytes:51

L0PC81              	100.00%		H2QMK3              	100.00%
Bootstrap support for L0PC81 as seed ortholog is 100%.
Bootstrap support for H2QMK3 as seed ortholog is 90%.

Group of orthologs #852. Best score 175 bits
Score difference with first non-orthologous sequence - P.jiroveci:175 P.troglodytes:61

L0PBX9              	100.00%		H2QYP0              	100.00%
Bootstrap support for L0PBX9 as seed ortholog is 100%.
Bootstrap support for H2QYP0 as seed ortholog is 64%.
Alternative seed ortholog is A2T6Y4 (61 bits away from this cluster)

Group of orthologs #853. Best score 174 bits
Score difference with first non-orthologous sequence - P.jiroveci:174 P.troglodytes:174

L0PFP1              	100.00%		H2QFE0              	100.00%
L0PC71              	75.03%		
Bootstrap support for L0PFP1 as seed ortholog is 100%.
Bootstrap support for H2QFE0 as seed ortholog is 100%.

Group of orthologs #854. Best score 174 bits
Score difference with first non-orthologous sequence - P.jiroveci:174 P.troglodytes:29

L0PH23              	100.00%		H2Q0R3              	100.00%
Bootstrap support for L0PH23 as seed ortholog is 100%.
Bootstrap support for H2Q0R3 as seed ortholog is 76%.

Group of orthologs #855. Best score 174 bits
Score difference with first non-orthologous sequence - P.jiroveci:174 P.troglodytes:174

L0P746              	100.00%		H2R8H9              	100.00%
Bootstrap support for L0P746 as seed ortholog is 100%.
Bootstrap support for H2R8H9 as seed ortholog is 100%.

Group of orthologs #856. Best score 173 bits
Score difference with first non-orthologous sequence - P.jiroveci:173 P.troglodytes:173

L0PA28              	100.00%		H2R2M6              	100.00%
                    	       		H2QQM1              	31.81%
Bootstrap support for L0PA28 as seed ortholog is 100%.
Bootstrap support for H2R2M6 as seed ortholog is 100%.

Group of orthologs #857. Best score 173 bits
Score difference with first non-orthologous sequence - P.jiroveci:173 P.troglodytes:128

L0PFW7              	100.00%		H2Q806              	100.00%
Bootstrap support for L0PFW7 as seed ortholog is 100%.
Bootstrap support for H2Q806 as seed ortholog is 100%.

Group of orthologs #858. Best score 173 bits
Score difference with first non-orthologous sequence - P.jiroveci:173 P.troglodytes:173

L0P740              	100.00%		H2QM26              	100.00%
Bootstrap support for L0P740 as seed ortholog is 100%.
Bootstrap support for H2QM26 as seed ortholog is 100%.

Group of orthologs #859. Best score 173 bits
Score difference with first non-orthologous sequence - P.jiroveci:173 P.troglodytes:173

L0PDP9              	100.00%		H2QK14              	100.00%
Bootstrap support for L0PDP9 as seed ortholog is 100%.
Bootstrap support for H2QK14 as seed ortholog is 100%.

Group of orthologs #860. Best score 173 bits
Score difference with first non-orthologous sequence - P.jiroveci:173 P.troglodytes:116

L0PC70              	100.00%		H2QP16              	100.00%
Bootstrap support for L0PC70 as seed ortholog is 100%.
Bootstrap support for H2QP16 as seed ortholog is 100%.

Group of orthologs #861. Best score 172 bits
Score difference with first non-orthologous sequence - P.jiroveci:80 P.troglodytes:91

L0PAQ4              	100.00%		H2Q134              	100.00%
Bootstrap support for L0PAQ4 as seed ortholog is 98%.
Bootstrap support for H2Q134 as seed ortholog is 98%.

Group of orthologs #862. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 P.troglodytes:23

L0PGM0              	100.00%		H2R0M4              	100.00%
                    	       		H2Q1P8              	71.28%
                    	       		H2QCT9              	35.38%
Bootstrap support for L0PGM0 as seed ortholog is 99%.
Bootstrap support for H2R0M4 as seed ortholog is 85%.

Group of orthologs #863. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 P.troglodytes:171

L0P9L8              	100.00%		H2Q2C9              	100.00%
Bootstrap support for L0P9L8 as seed ortholog is 100%.
Bootstrap support for H2Q2C9 as seed ortholog is 100%.

Group of orthologs #864. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 P.troglodytes:171

L0PFH2              	100.00%		G2HHC5              	100.00%
Bootstrap support for L0PFH2 as seed ortholog is 100%.
Bootstrap support for G2HHC5 as seed ortholog is 100%.

Group of orthologs #865. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 P.troglodytes:50

L0PBL9              	100.00%		H2QCW3              	100.00%
Bootstrap support for L0PBL9 as seed ortholog is 100%.
Bootstrap support for H2QCW3 as seed ortholog is 87%.

Group of orthologs #866. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 P.troglodytes:171

L0P780              	100.00%		H2QR11              	100.00%
Bootstrap support for L0P780 as seed ortholog is 100%.
Bootstrap support for H2QR11 as seed ortholog is 100%.

Group of orthologs #867. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:126 P.troglodytes:171

L0PE37              	100.00%		H2QL95              	100.00%
Bootstrap support for L0PE37 as seed ortholog is 100%.
Bootstrap support for H2QL95 as seed ortholog is 100%.

Group of orthologs #868. Best score 171 bits
Score difference with first non-orthologous sequence - P.jiroveci:171 P.troglodytes:9

L0PFZ5              	100.00%		H2QWJ5              	100.00%
Bootstrap support for L0PFZ5 as seed ortholog is 100%.
Bootstrap support for H2QWJ5 as seed ortholog is 60%.
Alternative seed ortholog is H2QNH6 (9 bits away from this cluster)

Group of orthologs #869. Best score 170 bits
Score difference with first non-orthologous sequence - P.jiroveci:170 P.troglodytes:120

L0PD40              	100.00%		H2QDM8              	100.00%
Bootstrap support for L0PD40 as seed ortholog is 100%.
Bootstrap support for H2QDM8 as seed ortholog is 99%.

Group of orthologs #870. Best score 170 bits
Score difference with first non-orthologous sequence - P.jiroveci:170 P.troglodytes:170

L0PA27              	100.00%		H2QM15              	100.00%
Bootstrap support for L0PA27 as seed ortholog is 100%.
Bootstrap support for H2QM15 as seed ortholog is 100%.

Group of orthologs #871. Best score 170 bits
Score difference with first non-orthologous sequence - P.jiroveci:170 P.troglodytes:170

L0P701              	100.00%		H2R3P2              	100.00%
Bootstrap support for L0P701 as seed ortholog is 100%.
Bootstrap support for H2R3P2 as seed ortholog is 100%.

Group of orthologs #872. Best score 169 bits
Score difference with first non-orthologous sequence - P.jiroveci:169 P.troglodytes:169

L0P8V3              	100.00%		H2QCV0              	100.00%
Bootstrap support for L0P8V3 as seed ortholog is 100%.
Bootstrap support for H2QCV0 as seed ortholog is 100%.

Group of orthologs #873. Best score 169 bits
Score difference with first non-orthologous sequence - P.jiroveci:169 P.troglodytes:71

L0PEI1              	100.00%		H2QKT2              	100.00%
Bootstrap support for L0PEI1 as seed ortholog is 100%.
Bootstrap support for H2QKT2 as seed ortholog is 99%.

Group of orthologs #874. Best score 168 bits
Score difference with first non-orthologous sequence - P.jiroveci:168 P.troglodytes:111

L0PC66              	100.00%		H2QRP8              	100.00%
L0PBN8              	73.91%		H2RA79              	40.39%
Bootstrap support for L0PC66 as seed ortholog is 100%.
Bootstrap support for H2QRP8 as seed ortholog is 99%.

Group of orthologs #875. Best score 168 bits
Score difference with first non-orthologous sequence - P.jiroveci:168 P.troglodytes:168

L0PG54              	100.00%		G2HH83              	100.00%
Bootstrap support for L0PG54 as seed ortholog is 100%.
Bootstrap support for G2HH83 as seed ortholog is 100%.

Group of orthologs #876. Best score 168 bits
Score difference with first non-orthologous sequence - P.jiroveci:168 P.troglodytes:168

L0P9G6              	100.00%		H2Q4F6              	100.00%
Bootstrap support for L0P9G6 as seed ortholog is 100%.
Bootstrap support for H2Q4F6 as seed ortholog is 100%.

Group of orthologs #877. Best score 168 bits
Score difference with first non-orthologous sequence - P.jiroveci:168 P.troglodytes:168

L0PGP5              	100.00%		H2QCD8              	100.00%
Bootstrap support for L0PGP5 as seed ortholog is 100%.
Bootstrap support for H2QCD8 as seed ortholog is 100%.

Group of orthologs #878. Best score 168 bits
Score difference with first non-orthologous sequence - P.jiroveci:168 P.troglodytes:168

L0P8D9              	100.00%		H2R3Z6              	100.00%
Bootstrap support for L0P8D9 as seed ortholog is 100%.
Bootstrap support for H2R3Z6 as seed ortholog is 100%.

Group of orthologs #879. Best score 167 bits
Score difference with first non-orthologous sequence - P.jiroveci:167 P.troglodytes:167

L0PFG0              	100.00%		Q2QLF0              	100.00%
                    	       		H2RCS8              	81.58%
                    	       		G2HI32              	6.94%
Bootstrap support for L0PFG0 as seed ortholog is 100%.
Bootstrap support for Q2QLF0 as seed ortholog is 100%.

Group of orthologs #880. Best score 167 bits
Score difference with first non-orthologous sequence - P.jiroveci:167 P.troglodytes:167

L0P9W6              	100.00%		H2QGL7              	100.00%
Bootstrap support for L0P9W6 as seed ortholog is 100%.
Bootstrap support for H2QGL7 as seed ortholog is 100%.

Group of orthologs #881. Best score 167 bits
Score difference with first non-orthologous sequence - P.jiroveci:167 P.troglodytes:167

L0PGK0              	100.00%		H2Q9T6              	100.00%
Bootstrap support for L0PGK0 as seed ortholog is 100%.
Bootstrap support for H2Q9T6 as seed ortholog is 100%.

Group of orthologs #882. Best score 167 bits
Score difference with first non-orthologous sequence - P.jiroveci:167 P.troglodytes:167

L0P8P5              	100.00%		H2RBJ1              	100.00%
Bootstrap support for L0P8P5 as seed ortholog is 100%.
Bootstrap support for H2RBJ1 as seed ortholog is 100%.

Group of orthologs #883. Best score 166 bits
Score difference with first non-orthologous sequence - P.jiroveci:166 P.troglodytes:166

L0PCP5              	100.00%		H2Q558              	100.00%
Bootstrap support for L0PCP5 as seed ortholog is 100%.
Bootstrap support for H2Q558 as seed ortholog is 100%.

Group of orthologs #884. Best score 166 bits
Score difference with first non-orthologous sequence - P.jiroveci:166 P.troglodytes:166

L0PFL0              	100.00%		H2Q324              	100.00%
Bootstrap support for L0PFL0 as seed ortholog is 100%.
Bootstrap support for H2Q324 as seed ortholog is 100%.

Group of orthologs #885. Best score 165 bits
Score difference with first non-orthologous sequence - P.jiroveci:165 P.troglodytes:165

L0PDL8              	100.00%		H2QLW7              	100.00%
L0PD52              	90.88%		
Bootstrap support for L0PDL8 as seed ortholog is 100%.
Bootstrap support for H2QLW7 as seed ortholog is 100%.

Group of orthologs #886. Best score 165 bits
Score difference with first non-orthologous sequence - P.jiroveci:165 P.troglodytes:165

L0PEA9              	100.00%		H2Q3I0              	100.00%
Bootstrap support for L0PEA9 as seed ortholog is 100%.
Bootstrap support for H2Q3I0 as seed ortholog is 100%.

Group of orthologs #887. Best score 165 bits
Score difference with first non-orthologous sequence - P.jiroveci:165 P.troglodytes:165

L0PDA4              	100.00%		H2QMN9              	100.00%
Bootstrap support for L0PDA4 as seed ortholog is 100%.
Bootstrap support for H2QMN9 as seed ortholog is 100%.

Group of orthologs #888. Best score 165 bits
Score difference with first non-orthologous sequence - P.jiroveci:165 P.troglodytes:165

L0P9T6              	100.00%		H2QWV6              	100.00%
Bootstrap support for L0P9T6 as seed ortholog is 100%.
Bootstrap support for H2QWV6 as seed ortholog is 100%.

Group of orthologs #889. Best score 165 bits
Score difference with first non-orthologous sequence - P.jiroveci:165 P.troglodytes:165

L0PA48              	100.00%		H2RGH3              	100.00%
Bootstrap support for L0PA48 as seed ortholog is 100%.
Bootstrap support for H2RGH3 as seed ortholog is 100%.

Group of orthologs #890. Best score 164 bits
Score difference with first non-orthologous sequence - P.jiroveci:164 P.troglodytes:164

L0PA78              	100.00%		H2PZ22              	100.00%
                    	       		H2Q5F6              	100.00%
Bootstrap support for L0PA78 as seed ortholog is 100%.
Bootstrap support for H2PZ22 as seed ortholog is 100%.
Bootstrap support for H2Q5F6 as seed ortholog is 100%.

Group of orthologs #891. Best score 164 bits
Score difference with first non-orthologous sequence - P.jiroveci:164 P.troglodytes:67

L0PDJ7              	100.00%		H2RG75              	100.00%
                    	       		H2Q5U7              	18.88%
Bootstrap support for L0PDJ7 as seed ortholog is 100%.
Bootstrap support for H2RG75 as seed ortholog is 99%.

Group of orthologs #892. Best score 164 bits
Score difference with first non-orthologous sequence - P.jiroveci:164 P.troglodytes:164

L0PEX0              	100.00%		H2QLS3              	100.00%
Bootstrap support for L0PEX0 as seed ortholog is 100%.
Bootstrap support for H2QLS3 as seed ortholog is 100%.

Group of orthologs #893. Best score 164 bits
Score difference with first non-orthologous sequence - P.jiroveci:164 P.troglodytes:164

L0PGF9              	100.00%		H2QY45              	100.00%
Bootstrap support for L0PGF9 as seed ortholog is 100%.
Bootstrap support for H2QY45 as seed ortholog is 100%.

Group of orthologs #894. Best score 163 bits
Score difference with first non-orthologous sequence - P.jiroveci:163 P.troglodytes:163

L0PFW9              	100.00%		H2QJZ7              	100.00%
                    	       		H2QGD2              	43.15%
Bootstrap support for L0PFW9 as seed ortholog is 100%.
Bootstrap support for H2QJZ7 as seed ortholog is 100%.

Group of orthologs #895. Best score 162 bits
Score difference with first non-orthologous sequence - P.jiroveci:110 P.troglodytes:34

L0PE79              	100.00%		H2Q5M1              	100.00%
                    	       		H2PZQ7              	76.71%
                    	       		H2Q2V0              	76.26%
                    	       		H2QZR9              	17.81%
                    	       		H2Q376              	16.44%
                    	       		A5A6J7              	15.53%
                    	       		H2QUG6              	11.42%
                    	       		H2QNG3              	10.05%
                    	       		H2QGV8              	9.13%
                    	       		H2Q086              	7.76%
                    	       		H2Q7Q7              	6.39%
Bootstrap support for L0PE79 as seed ortholog is 99%.
Bootstrap support for H2Q5M1 as seed ortholog is 90%.

Group of orthologs #896. Best score 162 bits
Score difference with first non-orthologous sequence - P.jiroveci:162 P.troglodytes:162

L0P8J4              	100.00%		H2Q8X9              	100.00%
                    	       		H2R5Z7              	41.64%
Bootstrap support for L0P8J4 as seed ortholog is 100%.
Bootstrap support for H2Q8X9 as seed ortholog is 100%.

Group of orthologs #897. Best score 162 bits
Score difference with first non-orthologous sequence - P.jiroveci:162 P.troglodytes:162

L0PE13              	100.00%		H2QFM7              	100.00%
                    	       		H2RBZ6              	13.61%
Bootstrap support for L0PE13 as seed ortholog is 100%.
Bootstrap support for H2QFM7 as seed ortholog is 100%.

Group of orthologs #898. Best score 162 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 P.troglodytes:97

L0PEX6              	100.00%		H2QR77              	100.00%
                    	       		H2QZ91              	5.12%
Bootstrap support for L0PEX6 as seed ortholog is 99%.
Bootstrap support for H2QR77 as seed ortholog is 99%.

Group of orthologs #899. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 P.troglodytes:161

L0P9X0              	100.00%		A5A6K2              	100.00%
                    	       		H2RGA0              	100.00%
Bootstrap support for L0P9X0 as seed ortholog is 100%.
Bootstrap support for A5A6K2 as seed ortholog is 100%.
Bootstrap support for H2RGA0 as seed ortholog is 100%.

Group of orthologs #900. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 P.troglodytes:161

L0P9G8              	100.00%		H2Q4T6              	100.00%
L0PDI0              	50.82%		
Bootstrap support for L0P9G8 as seed ortholog is 100%.
Bootstrap support for H2Q4T6 as seed ortholog is 100%.

Group of orthologs #901. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 P.troglodytes:161

L0P7D0              	100.00%		H2QWL8              	100.00%
                    	       		H2R964              	24.08%
Bootstrap support for L0P7D0 as seed ortholog is 100%.
Bootstrap support for H2QWL8 as seed ortholog is 100%.

Group of orthologs #902. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 P.troglodytes:54

L0PBL1              	100.00%		H2R889              	100.00%
                    	       		A5A6J5              	43.52%
Bootstrap support for L0PBL1 as seed ortholog is 100%.
Bootstrap support for H2R889 as seed ortholog is 88%.

Group of orthologs #903. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 P.troglodytes:161

L0PAB8              	100.00%		H2PYV5              	100.00%
Bootstrap support for L0PAB8 as seed ortholog is 100%.
Bootstrap support for H2PYV5 as seed ortholog is 100%.

Group of orthologs #904. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 P.troglodytes:119

L0P7Z9              	100.00%		H2Q3W9              	100.00%
Bootstrap support for L0P7Z9 as seed ortholog is 100%.
Bootstrap support for H2Q3W9 as seed ortholog is 100%.

Group of orthologs #905. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 P.troglodytes:161

L0PFH7              	100.00%		H2Q8Y9              	100.00%
Bootstrap support for L0PFH7 as seed ortholog is 100%.
Bootstrap support for H2Q8Y9 as seed ortholog is 100%.

Group of orthologs #906. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 P.troglodytes:161

L0PD11              	100.00%		H2QDG8              	100.00%
Bootstrap support for L0PD11 as seed ortholog is 100%.
Bootstrap support for H2QDG8 as seed ortholog is 100%.

Group of orthologs #907. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 P.troglodytes:161

L0PFP7              	100.00%		H2QL86              	100.00%
Bootstrap support for L0PFP7 as seed ortholog is 100%.
Bootstrap support for H2QL86 as seed ortholog is 100%.

Group of orthologs #908. Best score 161 bits
Score difference with first non-orthologous sequence - P.jiroveci:161 P.troglodytes:161

L0P9N4              	100.00%		H2QW67              	100.00%
Bootstrap support for L0P9N4 as seed ortholog is 100%.
Bootstrap support for H2QW67 as seed ortholog is 100%.

Group of orthologs #909. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 P.troglodytes:160

L0PFX0              	100.00%		H2PZL9              	100.00%
                    	       		H2QVC9              	64.73%
Bootstrap support for L0PFX0 as seed ortholog is 100%.
Bootstrap support for H2PZL9 as seed ortholog is 100%.

Group of orthologs #910. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 P.troglodytes:160

L0PFY9              	100.00%		H2QA06              	100.00%
                    	       		H2QEL3              	25.00%
Bootstrap support for L0PFY9 as seed ortholog is 100%.
Bootstrap support for H2QA06 as seed ortholog is 100%.

Group of orthologs #911. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 P.troglodytes:110

L0PBX0              	100.00%		H2QFK6              	100.00%
                    	       		H2RA32              	37.76%
Bootstrap support for L0PBX0 as seed ortholog is 100%.
Bootstrap support for H2QFK6 as seed ortholog is 99%.

Group of orthologs #912. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 P.troglodytes:160

L0PCK2              	100.00%		G2HF13              	100.00%
Bootstrap support for L0PCK2 as seed ortholog is 100%.
Bootstrap support for G2HF13 as seed ortholog is 100%.

Group of orthologs #913. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 P.troglodytes:114

L0PCP9              	100.00%		H2Q8E9              	100.00%
Bootstrap support for L0PCP9 as seed ortholog is 100%.
Bootstrap support for H2Q8E9 as seed ortholog is 99%.

Group of orthologs #914. Best score 160 bits
Score difference with first non-orthologous sequence - P.jiroveci:160 P.troglodytes:160

L0PCA8              	100.00%		H2QCT6              	100.00%
Bootstrap support for L0PCA8 as seed ortholog is 100%.
Bootstrap support for H2QCT6 as seed ortholog is 100%.

Group of orthologs #915. Best score 159 bits
Score difference with first non-orthologous sequence - P.jiroveci:159 P.troglodytes:29

L0PBR7              	100.00%		H2Q1A4              	100.00%
                    	       		H2PZV5              	94.32%
                    	       		H2R7K3              	93.18%
                    	       		H2QSF6              	93.18%
                    	       		H2RGZ6              	93.18%
                    	       		H2R7J4              	92.05%
                    	       		H2R8P6              	92.05%
                    	       		H2QSG3              	92.05%
                    	       		H2RDL9              	92.05%
                    	       		H2QSI0              	90.91%
                    	       		H2RAX0              	89.77%
                    	       		H2R8P8              	89.77%
Bootstrap support for L0PBR7 as seed ortholog is 100%.
Bootstrap support for H2Q1A4 as seed ortholog is 94%.

Group of orthologs #916. Best score 159 bits
Score difference with first non-orthologous sequence - P.jiroveci:159 P.troglodytes:159

L0P8S1              	100.00%		H2R923              	100.00%
                    	       		H2RED0              	43.57%
                    	       		H2QEF5              	39.37%
Bootstrap support for L0P8S1 as seed ortholog is 100%.
Bootstrap support for H2R923 as seed ortholog is 100%.

Group of orthologs #917. Best score 159 bits
Score difference with first non-orthologous sequence - P.jiroveci:33 P.troglodytes:159

L0PCJ0              	100.00%		H2Q7U1              	100.00%
Bootstrap support for L0PCJ0 as seed ortholog is 69%.
Alternative seed ortholog is L0PGZ6 (33 bits away from this cluster)
Bootstrap support for H2Q7U1 as seed ortholog is 100%.

Group of orthologs #918. Best score 159 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 P.troglodytes:88

L0PFK9              	100.00%		H2QG94              	100.00%
Bootstrap support for L0PFK9 as seed ortholog is 97%.
Bootstrap support for H2QG94 as seed ortholog is 97%.

Group of orthologs #919. Best score 158 bits
Score difference with first non-orthologous sequence - P.jiroveci:158 P.troglodytes:158

L0P8H6              	100.00%		H2QGF0              	100.00%
Bootstrap support for L0P8H6 as seed ortholog is 100%.
Bootstrap support for H2QGF0 as seed ortholog is 100%.

Group of orthologs #920. Best score 158 bits
Score difference with first non-orthologous sequence - P.jiroveci:158 P.troglodytes:158

L0P872              	100.00%		H2QJX7              	100.00%
Bootstrap support for L0P872 as seed ortholog is 100%.
Bootstrap support for H2QJX7 as seed ortholog is 100%.

Group of orthologs #921. Best score 158 bits
Score difference with first non-orthologous sequence - P.jiroveci:158 P.troglodytes:158

L0P7V4              	100.00%		H2QKM8              	100.00%
Bootstrap support for L0P7V4 as seed ortholog is 100%.
Bootstrap support for H2QKM8 as seed ortholog is 100%.

Group of orthologs #922. Best score 158 bits
Score difference with first non-orthologous sequence - P.jiroveci:158 P.troglodytes:158

L0PF39              	100.00%		H2QKQ5              	100.00%
Bootstrap support for L0PF39 as seed ortholog is 100%.
Bootstrap support for H2QKQ5 as seed ortholog is 100%.

Group of orthologs #923. Best score 158 bits
Score difference with first non-orthologous sequence - P.jiroveci:158 P.troglodytes:158

L0P7U2              	100.00%		H2R1D2              	100.00%
Bootstrap support for L0P7U2 as seed ortholog is 100%.
Bootstrap support for H2R1D2 as seed ortholog is 100%.

Group of orthologs #924. Best score 157 bits
Score difference with first non-orthologous sequence - P.jiroveci:157 P.troglodytes:102

L0PD70              	100.00%		H2R2J5              	100.00%
L0P9Q7              	81.96%		
Bootstrap support for L0PD70 as seed ortholog is 100%.
Bootstrap support for H2R2J5 as seed ortholog is 99%.

Group of orthologs #925. Best score 157 bits
Score difference with first non-orthologous sequence - P.jiroveci:157 P.troglodytes:157

L0PAY0              	100.00%		H2Q891              	100.00%
Bootstrap support for L0PAY0 as seed ortholog is 100%.
Bootstrap support for H2Q891 as seed ortholog is 100%.

Group of orthologs #926. Best score 157 bits
Score difference with first non-orthologous sequence - P.jiroveci:157 P.troglodytes:157

L0P7V8              	100.00%		H2QID0              	100.00%
Bootstrap support for L0P7V8 as seed ortholog is 100%.
Bootstrap support for H2QID0 as seed ortholog is 100%.

Group of orthologs #927. Best score 157 bits
Score difference with first non-orthologous sequence - P.jiroveci:157 P.troglodytes:157

L0PBI9              	100.00%		H2QWH3              	100.00%
Bootstrap support for L0PBI9 as seed ortholog is 100%.
Bootstrap support for H2QWH3 as seed ortholog is 100%.

Group of orthologs #928. Best score 156 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 P.troglodytes:63

L0PBF9              	100.00%		H2Q873              	100.00%
Bootstrap support for L0PBF9 as seed ortholog is 99%.
Bootstrap support for H2Q873 as seed ortholog is 98%.

Group of orthologs #929. Best score 156 bits
Score difference with first non-orthologous sequence - P.jiroveci:156 P.troglodytes:156

L0PDH1              	100.00%		H2QD43              	100.00%
Bootstrap support for L0PDH1 as seed ortholog is 100%.
Bootstrap support for H2QD43 as seed ortholog is 100%.

Group of orthologs #930. Best score 156 bits
Score difference with first non-orthologous sequence - P.jiroveci:156 P.troglodytes:156

L0P8J7              	100.00%		H2QLV3              	100.00%
Bootstrap support for L0P8J7 as seed ortholog is 100%.
Bootstrap support for H2QLV3 as seed ortholog is 100%.

Group of orthologs #931. Best score 156 bits
Score difference with first non-orthologous sequence - P.jiroveci:156 P.troglodytes:72

L0PDN5              	100.00%		H2QIA5              	100.00%
Bootstrap support for L0PDN5 as seed ortholog is 100%.
Bootstrap support for H2QIA5 as seed ortholog is 99%.

Group of orthologs #932. Best score 156 bits
Score difference with first non-orthologous sequence - P.jiroveci:156 P.troglodytes:156

L0PE02              	100.00%		H2QJR9              	100.00%
Bootstrap support for L0PE02 as seed ortholog is 100%.
Bootstrap support for H2QJR9 as seed ortholog is 100%.

Group of orthologs #933. Best score 156 bits
Score difference with first non-orthologous sequence - P.jiroveci:156 P.troglodytes:156

L0PFL1              	100.00%		H2R1P2              	100.00%
Bootstrap support for L0PFL1 as seed ortholog is 100%.
Bootstrap support for H2R1P2 as seed ortholog is 100%.

Group of orthologs #934. Best score 156 bits
Score difference with first non-orthologous sequence - P.jiroveci:156 P.troglodytes:156

L0PDV9              	100.00%		H2R4E3              	100.00%
Bootstrap support for L0PDV9 as seed ortholog is 100%.
Bootstrap support for H2R4E3 as seed ortholog is 100%.

Group of orthologs #935. Best score 155 bits
Score difference with first non-orthologous sequence - P.jiroveci:155 P.troglodytes:155

L0PF66              	100.00%		Q5R1W6              	100.00%
                    	       		H2QQD7              	64.27%
                    	       		H2QZA6              	51.10%
Bootstrap support for L0PF66 as seed ortholog is 100%.
Bootstrap support for Q5R1W6 as seed ortholog is 100%.

Group of orthologs #936. Best score 155 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 P.troglodytes:39

L0PDE1              	100.00%		H2QBZ1              	100.00%
                    	       		H2R067              	7.49%
Bootstrap support for L0PDE1 as seed ortholog is 99%.
Bootstrap support for H2QBZ1 as seed ortholog is 90%.

Group of orthologs #937. Best score 155 bits
Score difference with first non-orthologous sequence - P.jiroveci:155 P.troglodytes:155

L0P8Y0              	100.00%		H2QW09              	100.00%
Bootstrap support for L0P8Y0 as seed ortholog is 100%.
Bootstrap support for H2QW09 as seed ortholog is 100%.

Group of orthologs #938. Best score 155 bits
Score difference with first non-orthologous sequence - P.jiroveci:155 P.troglodytes:155

L0PEN3              	100.00%		H2R0D2              	100.00%
Bootstrap support for L0PEN3 as seed ortholog is 100%.
Bootstrap support for H2R0D2 as seed ortholog is 100%.

Group of orthologs #939. Best score 154 bits
Score difference with first non-orthologous sequence - P.jiroveci:154 P.troglodytes:154

L0P6R0              	100.00%		H2Q452              	100.00%
Bootstrap support for L0P6R0 as seed ortholog is 100%.
Bootstrap support for H2Q452 as seed ortholog is 100%.

Group of orthologs #940. Best score 154 bits
Score difference with first non-orthologous sequence - P.jiroveci:154 P.troglodytes:69

L0P852              	100.00%		H2Q965              	100.00%
Bootstrap support for L0P852 as seed ortholog is 100%.
Bootstrap support for H2Q965 as seed ortholog is 93%.

Group of orthologs #941. Best score 153 bits
Score difference with first non-orthologous sequence - P.jiroveci:153 P.troglodytes:153

L0PI55              	100.00%		G2HHA9              	100.00%
L0P840              	83.60%		
Bootstrap support for L0PI55 as seed ortholog is 100%.
Bootstrap support for G2HHA9 as seed ortholog is 100%.

Group of orthologs #942. Best score 153 bits
Score difference with first non-orthologous sequence - P.jiroveci:153 P.troglodytes:153

L0PAB2              	100.00%		H2QKW2              	100.00%
Bootstrap support for L0PAB2 as seed ortholog is 100%.
Bootstrap support for H2QKW2 as seed ortholog is 100%.

Group of orthologs #943. Best score 153 bits
Score difference with first non-orthologous sequence - P.jiroveci:153 P.troglodytes:65

L0PF33              	100.00%		H2QRC8              	100.00%
Bootstrap support for L0PF33 as seed ortholog is 100%.
Bootstrap support for H2QRC8 as seed ortholog is 99%.

Group of orthologs #944. Best score 152 bits
Score difference with first non-orthologous sequence - P.jiroveci:152 P.troglodytes:19

L0PE53              	100.00%		H2RA14              	100.00%
                    	       		H2QN74              	37.74%
Bootstrap support for L0PE53 as seed ortholog is 100%.
Bootstrap support for H2RA14 as seed ortholog is 70%.
Alternative seed ortholog is H2Q769 (19 bits away from this cluster)

Group of orthologs #945. Best score 152 bits
Score difference with first non-orthologous sequence - P.jiroveci:152 P.troglodytes:152

L0PCN2              	100.00%		H2Q2T8              	100.00%
Bootstrap support for L0PCN2 as seed ortholog is 100%.
Bootstrap support for H2Q2T8 as seed ortholog is 100%.

Group of orthologs #946. Best score 152 bits
Score difference with first non-orthologous sequence - P.jiroveci:152 P.troglodytes:152

L0PA22              	100.00%		H2QQM9              	100.00%
Bootstrap support for L0PA22 as seed ortholog is 100%.
Bootstrap support for H2QQM9 as seed ortholog is 100%.

Group of orthologs #947. Best score 152 bits
Score difference with first non-orthologous sequence - P.jiroveci:152 P.troglodytes:93

L0PBU7              	100.00%		H2R4J6              	100.00%
Bootstrap support for L0PBU7 as seed ortholog is 100%.
Bootstrap support for H2R4J6 as seed ortholog is 100%.

Group of orthologs #948. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 P.troglodytes:151

L0PB30              	100.00%		H2QP05              	100.00%
                    	       		H2RD06              	36.56%
                    	       		H2R4B5              	29.10%
                    	       		H2QHE7              	5.30%
Bootstrap support for L0PB30 as seed ortholog is 100%.
Bootstrap support for H2QP05 as seed ortholog is 100%.

Group of orthologs #949. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 P.troglodytes:151

L0PCX3              	100.00%		H2QIY9              	100.00%
                    	       		H2R474              	34.34%
                    	       		H2R8F1              	9.48%
Bootstrap support for L0PCX3 as seed ortholog is 100%.
Bootstrap support for H2QIY9 as seed ortholog is 100%.

Group of orthologs #950. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 P.troglodytes:151

L0PG38              	100.00%		H2QYA9              	100.00%
                    	       		H2REE0              	100.00%
Bootstrap support for L0PG38 as seed ortholog is 100%.
Bootstrap support for H2QYA9 as seed ortholog is 100%.
Bootstrap support for H2REE0 as seed ortholog is 100%.

Group of orthologs #951. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 P.troglodytes:151

L0P7U6              	100.00%		H2Q0L9              	100.00%
Bootstrap support for L0P7U6 as seed ortholog is 100%.
Bootstrap support for H2Q0L9 as seed ortholog is 100%.

Group of orthologs #952. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 P.troglodytes:151

L0PF65              	100.00%		H2QDB2              	100.00%
Bootstrap support for L0PF65 as seed ortholog is 100%.
Bootstrap support for H2QDB2 as seed ortholog is 100%.

Group of orthologs #953. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 P.troglodytes:151

L0PFQ7              	100.00%		H2QLR7              	100.00%
Bootstrap support for L0PFQ7 as seed ortholog is 100%.
Bootstrap support for H2QLR7 as seed ortholog is 100%.

Group of orthologs #954. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 P.troglodytes:151

L0PGI9              	100.00%		H2QV73              	100.00%
Bootstrap support for L0PGI9 as seed ortholog is 100%.
Bootstrap support for H2QV73 as seed ortholog is 100%.

Group of orthologs #955. Best score 151 bits
Score difference with first non-orthologous sequence - P.jiroveci:151 P.troglodytes:151

L0PEG0              	100.00%		H2R1R8              	100.00%
Bootstrap support for L0PEG0 as seed ortholog is 100%.
Bootstrap support for H2R1R8 as seed ortholog is 100%.

Group of orthologs #956. Best score 150 bits
Score difference with first non-orthologous sequence - P.jiroveci:150 P.troglodytes:150

L0PCC6              	100.00%		H2R1B1              	100.00%
                    	       		H2Q502              	30.90%
                    	       		H2R140              	17.71%
Bootstrap support for L0PCC6 as seed ortholog is 100%.
Bootstrap support for H2R1B1 as seed ortholog is 100%.

Group of orthologs #957. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 P.troglodytes:149

L0PEQ2              	100.00%		H2QQK3              	100.00%
L0P999              	59.45%		H2QBB1              	13.95%
Bootstrap support for L0PEQ2 as seed ortholog is 100%.
Bootstrap support for H2QQK3 as seed ortholog is 100%.

Group of orthologs #958. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 P.troglodytes:149

L0P9V3              	100.00%		H2Q6T4              	100.00%
Bootstrap support for L0P9V3 as seed ortholog is 100%.
Bootstrap support for H2Q6T4 as seed ortholog is 100%.

Group of orthologs #959. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 P.troglodytes:149

L0PFX5              	100.00%		H2Q534              	100.00%
Bootstrap support for L0PFX5 as seed ortholog is 100%.
Bootstrap support for H2Q534 as seed ortholog is 100%.

Group of orthologs #960. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 P.troglodytes:149

L0P9D1              	100.00%		H2R8F5              	100.00%
Bootstrap support for L0P9D1 as seed ortholog is 100%.
Bootstrap support for H2R8F5 as seed ortholog is 100%.

Group of orthologs #961. Best score 149 bits
Score difference with first non-orthologous sequence - P.jiroveci:149 P.troglodytes:149

L0PFG9              	100.00%		H2RC12              	100.00%
Bootstrap support for L0PFG9 as seed ortholog is 100%.
Bootstrap support for H2RC12 as seed ortholog is 100%.

Group of orthologs #962. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:44 P.troglodytes:47

L0P9Y3              	100.00%		H2RDN6              	100.00%
                    	       		H2R391              	56.16%
                    	       		H2QI21              	46.37%
                    	       		H2QMQ5              	25.80%
Bootstrap support for L0P9Y3 as seed ortholog is 81%.
Bootstrap support for H2RDN6 as seed ortholog is 92%.

Group of orthologs #963. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 P.troglodytes:148

L0PB34              	100.00%		H2PZ10              	100.00%
                    	       		H2QR25              	63.35%
Bootstrap support for L0PB34 as seed ortholog is 100%.
Bootstrap support for H2PZ10 as seed ortholog is 100%.

Group of orthologs #964. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 P.troglodytes:148

L0PDZ3              	100.00%		H2Q462              	100.00%
                    	       		H2QG79              	37.84%
Bootstrap support for L0PDZ3 as seed ortholog is 100%.
Bootstrap support for H2Q462 as seed ortholog is 100%.

Group of orthologs #965. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 P.troglodytes:148

L0P778              	100.00%		H2PXU1              	100.00%
Bootstrap support for L0P778 as seed ortholog is 100%.
Bootstrap support for H2PXU1 as seed ortholog is 100%.

Group of orthologs #966. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 P.troglodytes:77

L0P7E9              	100.00%		H2PYZ9              	100.00%
Bootstrap support for L0P7E9 as seed ortholog is 100%.
Bootstrap support for H2PYZ9 as seed ortholog is 99%.

Group of orthologs #967. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 P.troglodytes:148

L0P9U0              	100.00%		H2QK06              	100.00%
Bootstrap support for L0P9U0 as seed ortholog is 100%.
Bootstrap support for H2QK06 as seed ortholog is 100%.

Group of orthologs #968. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 P.troglodytes:148

L0PH83              	100.00%		H2QFA4              	100.00%
Bootstrap support for L0PH83 as seed ortholog is 100%.
Bootstrap support for H2QFA4 as seed ortholog is 100%.

Group of orthologs #969. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 P.troglodytes:148

L0P9B3              	100.00%		H2QVK3              	100.00%
Bootstrap support for L0P9B3 as seed ortholog is 100%.
Bootstrap support for H2QVK3 as seed ortholog is 100%.

Group of orthologs #970. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 P.troglodytes:52

L0P903              	100.00%		H2R3K8              	100.00%
Bootstrap support for L0P903 as seed ortholog is 100%.
Bootstrap support for H2R3K8 as seed ortholog is 96%.

Group of orthologs #971. Best score 148 bits
Score difference with first non-orthologous sequence - P.jiroveci:148 P.troglodytes:47

L0PF53              	100.00%		H2R3V1              	100.00%
Bootstrap support for L0PF53 as seed ortholog is 100%.
Bootstrap support for H2R3V1 as seed ortholog is 89%.

Group of orthologs #972. Best score 147 bits
Score difference with first non-orthologous sequence - P.jiroveci:147 P.troglodytes:39

L0PG65              	100.00%		H2R283              	100.00%
                    	       		H2QEA6              	41.40%
                    	       		H2RIH8              	5.69%
Bootstrap support for L0PG65 as seed ortholog is 100%.
Bootstrap support for H2R283 as seed ortholog is 84%.

Group of orthologs #973. Best score 147 bits
Score difference with first non-orthologous sequence - P.jiroveci:147 P.troglodytes:147

L0PDR9              	100.00%		H2R7B5              	100.00%
L0P8I3              	72.51%		H2Q5P8              	97.59%
Bootstrap support for L0PDR9 as seed ortholog is 100%.
Bootstrap support for H2R7B5 as seed ortholog is 100%.

Group of orthologs #974. Best score 147 bits
Score difference with first non-orthologous sequence - P.jiroveci:147 P.troglodytes:147

L0PD01              	100.00%		H2Q7L9              	100.00%
L0PF42              	100.00%		
Bootstrap support for L0PD01 as seed ortholog is 100%.
Bootstrap support for L0PF42 as seed ortholog is 100%.
Bootstrap support for H2Q7L9 as seed ortholog is 100%.

Group of orthologs #975. Best score 147 bits
Score difference with first non-orthologous sequence - P.jiroveci:147 P.troglodytes:147

L0P8G7              	100.00%		H2Q8K0              	100.00%
Bootstrap support for L0P8G7 as seed ortholog is 100%.
Bootstrap support for H2Q8K0 as seed ortholog is 100%.

Group of orthologs #976. Best score 147 bits
Score difference with first non-orthologous sequence - P.jiroveci:147 P.troglodytes:147

L0PCG3              	100.00%		H2QHV3              	100.00%
Bootstrap support for L0PCG3 as seed ortholog is 100%.
Bootstrap support for H2QHV3 as seed ortholog is 100%.

Group of orthologs #977. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 P.troglodytes:146

L0PEC9              	100.00%		H2PYC4              	100.00%
Bootstrap support for L0PEC9 as seed ortholog is 100%.
Bootstrap support for H2PYC4 as seed ortholog is 100%.

Group of orthologs #978. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 P.troglodytes:146

L0P9F5              	100.00%		H2QG82              	100.00%
Bootstrap support for L0P9F5 as seed ortholog is 100%.
Bootstrap support for H2QG82 as seed ortholog is 100%.

Group of orthologs #979. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 P.troglodytes:146

L0P799              	100.00%		H2QJ67              	100.00%
Bootstrap support for L0P799 as seed ortholog is 100%.
Bootstrap support for H2QJ67 as seed ortholog is 100%.

Group of orthologs #980. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 P.troglodytes:146

L0P7A4              	100.00%		H2QKI3              	100.00%
Bootstrap support for L0P7A4 as seed ortholog is 100%.
Bootstrap support for H2QKI3 as seed ortholog is 100%.

Group of orthologs #981. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 P.troglodytes:146

L0PFY6              	100.00%		H2QDZ7              	100.00%
Bootstrap support for L0PFY6 as seed ortholog is 100%.
Bootstrap support for H2QDZ7 as seed ortholog is 100%.

Group of orthologs #982. Best score 146 bits
Score difference with first non-orthologous sequence - P.jiroveci:146 P.troglodytes:67

L0PBZ4              	100.00%		H2R235              	100.00%
Bootstrap support for L0PBZ4 as seed ortholog is 100%.
Bootstrap support for H2R235 as seed ortholog is 99%.

Group of orthologs #983. Best score 145 bits
Score difference with first non-orthologous sequence - P.jiroveci:145 P.troglodytes:145

L0PEB8              	100.00%		H2QEX4              	100.00%
                    	       		H2R2X7              	39.79%
Bootstrap support for L0PEB8 as seed ortholog is 100%.
Bootstrap support for H2QEX4 as seed ortholog is 100%.

Group of orthologs #984. Best score 145 bits
Score difference with first non-orthologous sequence - P.jiroveci:145 P.troglodytes:70

L0P963              	100.00%		H2QM94              	100.00%
                    	       		H2QCU2              	78.36%
Bootstrap support for L0P963 as seed ortholog is 100%.
Bootstrap support for H2QM94 as seed ortholog is 97%.

Group of orthologs #985. Best score 145 bits
Score difference with first non-orthologous sequence - P.jiroveci:145 P.troglodytes:145

L0PCU6              	100.00%		H2QFH0              	100.00%
Bootstrap support for L0PCU6 as seed ortholog is 100%.
Bootstrap support for H2QFH0 as seed ortholog is 100%.

Group of orthologs #986. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 P.troglodytes:144

L0P805              	100.00%		H2R387              	100.00%
                    	       		H2QJE8              	49.88%
                    	       		H2Q6C9              	42.28%
Bootstrap support for L0P805 as seed ortholog is 100%.
Bootstrap support for H2R387 as seed ortholog is 100%.

Group of orthologs #987. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 P.troglodytes:144

L0PE36              	100.00%		H2R6H2              	100.00%
                    	       		H2Q1P5              	45.67%
Bootstrap support for L0PE36 as seed ortholog is 100%.
Bootstrap support for H2R6H2 as seed ortholog is 100%.

Group of orthologs #988. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 P.troglodytes:144

L0PBG3              	100.00%		H2QAN4              	100.00%
Bootstrap support for L0PBG3 as seed ortholog is 100%.
Bootstrap support for H2QAN4 as seed ortholog is 100%.

Group of orthologs #989. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 P.troglodytes:144

L0PEZ4              	100.00%		H2QND8              	100.00%
Bootstrap support for L0PEZ4 as seed ortholog is 100%.
Bootstrap support for H2QND8 as seed ortholog is 100%.

Group of orthologs #990. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 P.troglodytes:144

L0PDX2              	100.00%		H2QTU8              	100.00%
Bootstrap support for L0PDX2 as seed ortholog is 100%.
Bootstrap support for H2QTU8 as seed ortholog is 100%.

Group of orthologs #991. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 P.troglodytes:144

L0PBI8              	100.00%		H2R146              	100.00%
Bootstrap support for L0PBI8 as seed ortholog is 100%.
Bootstrap support for H2R146 as seed ortholog is 100%.

Group of orthologs #992. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 P.troglodytes:67

L0PB84              	100.00%		H2RAT7              	100.00%
Bootstrap support for L0PB84 as seed ortholog is 100%.
Bootstrap support for H2RAT7 as seed ortholog is 99%.

Group of orthologs #993. Best score 144 bits
Score difference with first non-orthologous sequence - P.jiroveci:144 P.troglodytes:144

L0PFD5              	100.00%		H2R7L0              	100.00%
Bootstrap support for L0PFD5 as seed ortholog is 100%.
Bootstrap support for H2R7L0 as seed ortholog is 100%.

Group of orthologs #994. Best score 143 bits
Score difference with first non-orthologous sequence - P.jiroveci:143 P.troglodytes:143

L0P7K4              	100.00%		H2QVF5              	100.00%
L0P859              	81.83%		
Bootstrap support for L0P7K4 as seed ortholog is 100%.
Bootstrap support for H2QVF5 as seed ortholog is 100%.

Group of orthologs #995. Best score 143 bits
Score difference with first non-orthologous sequence - P.jiroveci:143 P.troglodytes:143

L0PEG7              	100.00%		H2QIE7              	100.00%
Bootstrap support for L0PEG7 as seed ortholog is 100%.
Bootstrap support for H2QIE7 as seed ortholog is 100%.

Group of orthologs #996. Best score 143 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 P.troglodytes:143

L0PA67              	100.00%		H2R837              	100.00%
Bootstrap support for L0PA67 as seed ortholog is 100%.
Bootstrap support for H2R837 as seed ortholog is 100%.

Group of orthologs #997. Best score 142 bits
Score difference with first non-orthologous sequence - P.jiroveci:142 P.troglodytes:84

L0P948              	100.00%		H2Q1D5              	100.00%
Bootstrap support for L0P948 as seed ortholog is 100%.
Bootstrap support for H2Q1D5 as seed ortholog is 99%.

Group of orthologs #998. Best score 142 bits
Score difference with first non-orthologous sequence - P.jiroveci:142 P.troglodytes:142

L0PA83              	100.00%		H2Q0U5              	100.00%
Bootstrap support for L0PA83 as seed ortholog is 100%.
Bootstrap support for H2Q0U5 as seed ortholog is 100%.

Group of orthologs #999. Best score 142 bits
Score difference with first non-orthologous sequence - P.jiroveci:142 P.troglodytes:142

L0PG78              	100.00%		H2Q2P0              	100.00%
Bootstrap support for L0PG78 as seed ortholog is 100%.
Bootstrap support for H2Q2P0 as seed ortholog is 100%.

Group of orthologs #1000. Best score 142 bits
Score difference with first non-orthologous sequence - P.jiroveci:142 P.troglodytes:142

L0PFR0              	100.00%		H2QPQ4              	100.00%
Bootstrap support for L0PFR0 as seed ortholog is 100%.
Bootstrap support for H2QPQ4 as seed ortholog is 100%.

Group of orthologs #1001. Best score 141 bits
Score difference with first non-orthologous sequence - P.jiroveci:141 P.troglodytes:141

L0P800              	100.00%		H2Q0W3              	100.00%
                    	       		H2RFH9              	22.75%
Bootstrap support for L0P800 as seed ortholog is 100%.
Bootstrap support for H2Q0W3 as seed ortholog is 100%.

Group of orthologs #1002. Best score 141 bits
Score difference with first non-orthologous sequence - P.jiroveci:141 P.troglodytes:141

L0PDW9              	100.00%		H2QBR6              	100.00%
Bootstrap support for L0PDW9 as seed ortholog is 100%.
Bootstrap support for H2QBR6 as seed ortholog is 100%.

Group of orthologs #1003. Best score 141 bits
Score difference with first non-orthologous sequence - P.jiroveci:141 P.troglodytes:89

L0PDY2              	100.00%		H2QUQ2              	100.00%
Bootstrap support for L0PDY2 as seed ortholog is 100%.
Bootstrap support for H2QUQ2 as seed ortholog is 99%.

Group of orthologs #1004. Best score 140 bits
Score difference with first non-orthologous sequence - P.jiroveci:140 P.troglodytes:140

L0PAM2              	100.00%		H2PYA9              	100.00%
Bootstrap support for L0PAM2 as seed ortholog is 100%.
Bootstrap support for H2PYA9 as seed ortholog is 100%.

Group of orthologs #1005. Best score 140 bits
Score difference with first non-orthologous sequence - P.jiroveci:140 P.troglodytes:140

L0P8D7              	100.00%		H2Q4I3              	100.00%
Bootstrap support for L0P8D7 as seed ortholog is 100%.
Bootstrap support for H2Q4I3 as seed ortholog is 100%.

Group of orthologs #1006. Best score 140 bits
Score difference with first non-orthologous sequence - P.jiroveci:140 P.troglodytes:140

L0PCC8              	100.00%		H2Q8U0              	100.00%
Bootstrap support for L0PCC8 as seed ortholog is 100%.
Bootstrap support for H2Q8U0 as seed ortholog is 100%.

Group of orthologs #1007. Best score 139 bits
Score difference with first non-orthologous sequence - P.jiroveci:139 P.troglodytes:139

L0PDW7              	100.00%		G2HFZ2              	100.00%
L0PIN1              	58.90%		
Bootstrap support for L0PDW7 as seed ortholog is 100%.
Bootstrap support for G2HFZ2 as seed ortholog is 100%.

Group of orthologs #1008. Best score 139 bits
Score difference with first non-orthologous sequence - P.jiroveci:139 P.troglodytes:139

L0P938              	100.00%		H2Q641              	100.00%
                    	       		H2QDB5              	53.88%
Bootstrap support for L0P938 as seed ortholog is 100%.
Bootstrap support for H2Q641 as seed ortholog is 100%.

Group of orthologs #1009. Best score 139 bits
Score difference with first non-orthologous sequence - P.jiroveci:139 P.troglodytes:77

L0P8I2              	100.00%		H2PYR6              	100.00%
Bootstrap support for L0P8I2 as seed ortholog is 100%.
Bootstrap support for H2PYR6 as seed ortholog is 99%.

Group of orthologs #1010. Best score 139 bits
Score difference with first non-orthologous sequence - P.jiroveci:139 P.troglodytes:139

L0PAW7              	100.00%		H2QFR4              	100.00%
Bootstrap support for L0PAW7 as seed ortholog is 100%.
Bootstrap support for H2QFR4 as seed ortholog is 100%.

Group of orthologs #1011. Best score 139 bits
Score difference with first non-orthologous sequence - P.jiroveci:139 P.troglodytes:139

L0P8P0              	100.00%		H2R3D2              	100.00%
Bootstrap support for L0P8P0 as seed ortholog is 100%.
Bootstrap support for H2R3D2 as seed ortholog is 100%.

Group of orthologs #1012. Best score 138 bits
Score difference with first non-orthologous sequence - P.jiroveci:138 P.troglodytes:48

L0P9S9              	100.00%		H2Q5S0              	100.00%
L0PDT3              	43.38%		H2Q5R9              	48.89%
                    	       		H2RB81              	32.87%
                    	       		H2QYJ8              	30.54%
                    	       		H2Q8F1              	23.97%
Bootstrap support for L0P9S9 as seed ortholog is 100%.
Bootstrap support for H2Q5S0 as seed ortholog is 85%.

Group of orthologs #1013. Best score 138 bits
Score difference with first non-orthologous sequence - P.jiroveci:138 P.troglodytes:138

L0PFP4              	100.00%		H2QXB5              	100.00%
                    	       		H2QXB6              	84.08%
Bootstrap support for L0PFP4 as seed ortholog is 100%.
Bootstrap support for H2QXB5 as seed ortholog is 100%.

Group of orthologs #1014. Best score 138 bits
Score difference with first non-orthologous sequence - P.jiroveci:138 P.troglodytes:138

L0PA35              	100.00%		H2QTG0              	100.00%
Bootstrap support for L0PA35 as seed ortholog is 100%.
Bootstrap support for H2QTG0 as seed ortholog is 100%.

Group of orthologs #1015. Best score 138 bits
Score difference with first non-orthologous sequence - P.jiroveci:138 P.troglodytes:84

L0PEV3              	100.00%		H2RD40              	100.00%
Bootstrap support for L0PEV3 as seed ortholog is 100%.
Bootstrap support for H2RD40 as seed ortholog is 99%.

Group of orthologs #1016. Best score 136 bits
Score difference with first non-orthologous sequence - P.jiroveci:136 P.troglodytes:136

L0PE18              	100.00%		H2QNP1              	100.00%
                    	       		H2R3Y8              	100.00%
                    	       		H2R3R1              	17.13%
                    	       		H2QYS2              	16.34%
                    	       		H2R0H2              	16.32%
                    	       		H2QBA6              	13.80%
                    	       		H2QB44              	12.76%
                    	       		H2R646              	11.95%
                    	       		H2R2Y7              	11.78%
                    	       		H2R9S9              	11.24%
                    	       		H2RA50              	10.98%
                    	       		H2QBA7              	8.96%
                    	       		H2RCW5              	5.62%
Bootstrap support for L0PE18 as seed ortholog is 100%.
Bootstrap support for H2QNP1 as seed ortholog is 100%.
Bootstrap support for H2R3Y8 as seed ortholog is 100%.

Group of orthologs #1017. Best score 136 bits
Score difference with first non-orthologous sequence - P.jiroveci:136 P.troglodytes:29

L0P9S6              	100.00%		H2R4I7              	100.00%
                    	       		H2QYI2              	63.30%
                    	       		H2QNJ1              	54.24%
                    	       		H2R3S9              	12.01%
                    	       		H2QIG9              	5.34%
                    	       		H2QIG8              	5.05%
Bootstrap support for L0P9S6 as seed ortholog is 100%.
Bootstrap support for H2R4I7 as seed ortholog is 80%.

Group of orthologs #1018. Best score 136 bits
Score difference with first non-orthologous sequence - P.jiroveci:136 P.troglodytes:136

L0PCA3              	100.00%		H2R1Q2              	100.00%
                    	       		H2QQW2              	20.44%
                    	       		H2Q9U6              	20.26%
Bootstrap support for L0PCA3 as seed ortholog is 100%.
Bootstrap support for H2R1Q2 as seed ortholog is 100%.

Group of orthologs #1019. Best score 136 bits
Score difference with first non-orthologous sequence - P.jiroveci:136 P.troglodytes:136

L0P8Z8              	100.00%		H2R3I2              	100.00%
L0PFN6              	78.69%		
Bootstrap support for L0P8Z8 as seed ortholog is 100%.
Bootstrap support for H2R3I2 as seed ortholog is 100%.

Group of orthologs #1020. Best score 136 bits
Score difference with first non-orthologous sequence - P.jiroveci:136 P.troglodytes:136

L0PF62              	100.00%		H2QY43              	100.00%
Bootstrap support for L0PF62 as seed ortholog is 100%.
Bootstrap support for H2QY43 as seed ortholog is 100%.

Group of orthologs #1021. Best score 135 bits
Score difference with first non-orthologous sequence - P.jiroveci:135 P.troglodytes:135

L0P8W1              	100.00%		H2Q1M2              	100.00%
Bootstrap support for L0P8W1 as seed ortholog is 100%.
Bootstrap support for H2Q1M2 as seed ortholog is 100%.

Group of orthologs #1022. Best score 135 bits
Score difference with first non-orthologous sequence - P.jiroveci:135 P.troglodytes:135

L0PA88              	100.00%		H2Q6B5              	100.00%
Bootstrap support for L0PA88 as seed ortholog is 100%.
Bootstrap support for H2Q6B5 as seed ortholog is 100%.

Group of orthologs #1023. Best score 135 bits
Score difference with first non-orthologous sequence - P.jiroveci:135 P.troglodytes:135

L0PEI9              	100.00%		H2QAD7              	100.00%
Bootstrap support for L0PEI9 as seed ortholog is 100%.
Bootstrap support for H2QAD7 as seed ortholog is 100%.

Group of orthologs #1024. Best score 135 bits
Score difference with first non-orthologous sequence - P.jiroveci:135 P.troglodytes:135

L0PAS7              	100.00%		H2QHP5              	100.00%
Bootstrap support for L0PAS7 as seed ortholog is 100%.
Bootstrap support for H2QHP5 as seed ortholog is 100%.

Group of orthologs #1025. Best score 134 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 P.troglodytes:134

L0PDZ4              	100.00%		H2Q5R3              	100.00%
                    	       		H2QMR1              	54.70%
Bootstrap support for L0PDZ4 as seed ortholog is 100%.
Bootstrap support for H2Q5R3 as seed ortholog is 100%.

Group of orthologs #1026. Best score 134 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 P.troglodytes:134

L0PCZ5              	100.00%		H2Q467              	100.00%
Bootstrap support for L0PCZ5 as seed ortholog is 100%.
Bootstrap support for H2Q467 as seed ortholog is 100%.

Group of orthologs #1027. Best score 134 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 P.troglodytes:134

L0P7A1              	100.00%		H2QDK5              	100.00%
Bootstrap support for L0P7A1 as seed ortholog is 100%.
Bootstrap support for H2QDK5 as seed ortholog is 100%.

Group of orthologs #1028. Best score 134 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 P.troglodytes:134

L0PAT4              	100.00%		H2QKM3              	100.00%
Bootstrap support for L0PAT4 as seed ortholog is 100%.
Bootstrap support for H2QKM3 as seed ortholog is 100%.

Group of orthologs #1029. Best score 134 bits
Score difference with first non-orthologous sequence - P.jiroveci:134 P.troglodytes:134

L0PG43              	100.00%		H2QFQ9              	100.00%
Bootstrap support for L0PG43 as seed ortholog is 100%.
Bootstrap support for H2QFQ9 as seed ortholog is 100%.

Group of orthologs #1030. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 P.troglodytes:67

L0PCT4              	100.00%		H2QRU1              	100.00%
                    	       		H2QRU0              	64.80%
                    	       		H2R579              	50.91%
                    	       		H2Q4J6              	42.39%
Bootstrap support for L0PCT4 as seed ortholog is 100%.
Bootstrap support for H2QRU1 as seed ortholog is 94%.

Group of orthologs #1031. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 P.troglodytes:133

L0PFS7              	100.00%		H2Q8P7              	100.00%
                    	       		H2R226              	20.25%
Bootstrap support for L0PFS7 as seed ortholog is 100%.
Bootstrap support for H2Q8P7 as seed ortholog is 100%.

Group of orthologs #1032. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 P.troglodytes:133

L0P733              	100.00%		H2PZF8              	100.00%
Bootstrap support for L0P733 as seed ortholog is 100%.
Bootstrap support for H2PZF8 as seed ortholog is 100%.

Group of orthologs #1033. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 P.troglodytes:133

L0P8G0              	100.00%		H2PZF0              	100.00%
Bootstrap support for L0P8G0 as seed ortholog is 99%.
Bootstrap support for H2PZF0 as seed ortholog is 100%.

Group of orthologs #1034. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 P.troglodytes:133

L0PBR1              	100.00%		H2Q2V8              	100.00%
Bootstrap support for L0PBR1 as seed ortholog is 100%.
Bootstrap support for H2Q2V8 as seed ortholog is 100%.

Group of orthologs #1035. Best score 133 bits
Score difference with first non-orthologous sequence - P.jiroveci:133 P.troglodytes:133

L0PEV6              	100.00%		H2QSS8              	100.00%
Bootstrap support for L0PEV6 as seed ortholog is 100%.
Bootstrap support for H2QSS8 as seed ortholog is 100%.

Group of orthologs #1036. Best score 132 bits
Score difference with first non-orthologous sequence - P.jiroveci:132 P.troglodytes:132

L0PFH1              	100.00%		H2QJX9              	100.00%
Bootstrap support for L0PFH1 as seed ortholog is 100%.
Bootstrap support for H2QJX9 as seed ortholog is 100%.

Group of orthologs #1037. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 P.troglodytes:131

L0P8G3              	100.00%		H2Q3I4              	100.00%
Bootstrap support for L0P8G3 as seed ortholog is 100%.
Bootstrap support for H2Q3I4 as seed ortholog is 100%.

Group of orthologs #1038. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 P.troglodytes:131

L0PC24              	100.00%		H2QAB7              	100.00%
Bootstrap support for L0PC24 as seed ortholog is 100%.
Bootstrap support for H2QAB7 as seed ortholog is 100%.

Group of orthologs #1039. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 P.troglodytes:131

L0PG28              	100.00%		H2QBT5              	100.00%
Bootstrap support for L0PG28 as seed ortholog is 100%.
Bootstrap support for H2QBT5 as seed ortholog is 100%.

Group of orthologs #1040. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 P.troglodytes:131

L0PAZ1              	100.00%		H2QLN0              	100.00%
Bootstrap support for L0PAZ1 as seed ortholog is 100%.
Bootstrap support for H2QLN0 as seed ortholog is 100%.

Group of orthologs #1041. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 P.troglodytes:131

L0PCC0              	100.00%		H2R2E5              	100.00%
Bootstrap support for L0PCC0 as seed ortholog is 100%.
Bootstrap support for H2R2E5 as seed ortholog is 100%.

Group of orthologs #1042. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:131 P.troglodytes:131

L0PB69              	100.00%		H2RDU3              	100.00%
Bootstrap support for L0PB69 as seed ortholog is 100%.
Bootstrap support for H2RDU3 as seed ortholog is 100%.

Group of orthologs #1043. Best score 131 bits
Score difference with first non-orthologous sequence - P.jiroveci:80 P.troglodytes:131

L0PD77              	100.00%		Q8HXP7              	100.00%
Bootstrap support for L0PD77 as seed ortholog is 99%.
Bootstrap support for Q8HXP7 as seed ortholog is 100%.

Group of orthologs #1044. Best score 130 bits
Score difference with first non-orthologous sequence - P.jiroveci:130 P.troglodytes:130

L0P7Y4              	100.00%		H2QDN5              	100.00%
Bootstrap support for L0P7Y4 as seed ortholog is 100%.
Bootstrap support for H2QDN5 as seed ortholog is 100%.

Group of orthologs #1045. Best score 130 bits
Score difference with first non-orthologous sequence - P.jiroveci:130 P.troglodytes:130

L0PEV4              	100.00%		H2QW04              	100.00%
Bootstrap support for L0PEV4 as seed ortholog is 100%.
Bootstrap support for H2QW04 as seed ortholog is 100%.

Group of orthologs #1046. Best score 130 bits
Score difference with first non-orthologous sequence - P.jiroveci:130 P.troglodytes:130

L0PE48              	100.00%		H2R380              	100.00%
Bootstrap support for L0PE48 as seed ortholog is 100%.
Bootstrap support for H2R380 as seed ortholog is 100%.

Group of orthologs #1047. Best score 130 bits
Score difference with first non-orthologous sequence - P.jiroveci:130 P.troglodytes:130

L0PDE5              	100.00%		H2RDD2              	100.00%
Bootstrap support for L0PDE5 as seed ortholog is 100%.
Bootstrap support for H2RDD2 as seed ortholog is 100%.

Group of orthologs #1048. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 P.troglodytes:129

L0P6Q5              	100.00%		H2PZU8              	100.00%
                    	       		G2HGR1              	60.88%
Bootstrap support for L0P6Q5 as seed ortholog is 100%.
Bootstrap support for H2PZU8 as seed ortholog is 100%.

Group of orthologs #1049. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 P.troglodytes:129

L0P8K4              	100.00%		H2QP70              	100.00%
                    	       		H2QRR7              	17.00%
Bootstrap support for L0P8K4 as seed ortholog is 100%.
Bootstrap support for H2QP70 as seed ortholog is 100%.

Group of orthologs #1050. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 P.troglodytes:33

L0P9Q9              	100.00%		H2QVA1              	100.00%
                    	       		H2Q5A9              	10.14%
Bootstrap support for L0P9Q9 as seed ortholog is 100%.
Bootstrap support for H2QVA1 as seed ortholog is 78%.

Group of orthologs #1051. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 P.troglodytes:129

L0PBU1              	100.00%		H2QTI3              	100.00%
                    	       		H2QYS0              	35.64%
Bootstrap support for L0PBU1 as seed ortholog is 100%.
Bootstrap support for H2QTI3 as seed ortholog is 100%.

Group of orthologs #1052. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 P.troglodytes:129

L0PDN8              	100.00%		H2QUP5              	100.00%
                    	       		H2Q861              	8.06%
Bootstrap support for L0PDN8 as seed ortholog is 100%.
Bootstrap support for H2QUP5 as seed ortholog is 100%.

Group of orthologs #1053. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 P.troglodytes:129

L0PFZ7              	100.00%		H2QXL9              	100.00%
                    	       		H2QAY5              	40.08%
Bootstrap support for L0PFZ7 as seed ortholog is 100%.
Bootstrap support for H2QXL9 as seed ortholog is 100%.

Group of orthologs #1054. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 P.troglodytes:129

L0P9M3              	100.00%		H2Q9G9              	100.00%
Bootstrap support for L0P9M3 as seed ortholog is 100%.
Bootstrap support for H2Q9G9 as seed ortholog is 100%.

Group of orthologs #1055. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 P.troglodytes:85

L0PG59              	100.00%		H2QJ72              	100.00%
Bootstrap support for L0PG59 as seed ortholog is 100%.
Bootstrap support for H2QJ72 as seed ortholog is 99%.

Group of orthologs #1056. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 P.troglodytes:129

L0PD60              	100.00%		H2QS26              	100.00%
Bootstrap support for L0PD60 as seed ortholog is 100%.
Bootstrap support for H2QS26 as seed ortholog is 100%.

Group of orthologs #1057. Best score 129 bits
Score difference with first non-orthologous sequence - P.jiroveci:129 P.troglodytes:129

L0PAA1              	100.00%		H2RGB8              	100.00%
Bootstrap support for L0PAA1 as seed ortholog is 100%.
Bootstrap support for H2RGB8 as seed ortholog is 100%.

Group of orthologs #1058. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 P.troglodytes:128

L0PA43              	100.00%		H2PYG1              	100.00%
                    	       		H2QTR3              	35.82%
Bootstrap support for L0PA43 as seed ortholog is 100%.
Bootstrap support for H2PYG1 as seed ortholog is 100%.

Group of orthologs #1059. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 P.troglodytes:128

L0P940              	100.00%		H2QIF7              	100.00%
                    	       		H2R9A9              	49.60%
Bootstrap support for L0P940 as seed ortholog is 100%.
Bootstrap support for H2QIF7 as seed ortholog is 100%.

Group of orthologs #1060. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 P.troglodytes:128

L0P9E5              	100.00%		H2Q1A0              	100.00%
Bootstrap support for L0P9E5 as seed ortholog is 100%.
Bootstrap support for H2Q1A0 as seed ortholog is 100%.

Group of orthologs #1061. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 P.troglodytes:87

L0PFV4              	100.00%		H2Q8V8              	100.00%
Bootstrap support for L0PFV4 as seed ortholog is 100%.
Bootstrap support for H2Q8V8 as seed ortholog is 99%.

Group of orthologs #1062. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 P.troglodytes:128

L0PG87              	100.00%		H2QC81              	100.00%
Bootstrap support for L0PG87 as seed ortholog is 100%.
Bootstrap support for H2QC81 as seed ortholog is 100%.

Group of orthologs #1063. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 P.troglodytes:128

L0P7N9              	100.00%		H2R129              	100.00%
Bootstrap support for L0P7N9 as seed ortholog is 100%.
Bootstrap support for H2R129 as seed ortholog is 100%.

Group of orthologs #1064. Best score 128 bits
Score difference with first non-orthologous sequence - P.jiroveci:128 P.troglodytes:128

L0PIR4              	100.00%		H2QTV1              	100.00%
Bootstrap support for L0PIR4 as seed ortholog is 100%.
Bootstrap support for H2QTV1 as seed ortholog is 100%.

Group of orthologs #1065. Best score 127 bits
Score difference with first non-orthologous sequence - P.jiroveci:127 P.troglodytes:127

L0P7C8              	100.00%		H2PZ06              	100.00%
                    	       		H2QFP4              	36.20%
Bootstrap support for L0P7C8 as seed ortholog is 100%.
Bootstrap support for H2PZ06 as seed ortholog is 100%.

Group of orthologs #1066. Best score 127 bits
Score difference with first non-orthologous sequence - P.jiroveci:127 P.troglodytes:127

L0PFM7              	100.00%		H2QEK5              	100.00%
Bootstrap support for L0PFM7 as seed ortholog is 100%.
Bootstrap support for H2QEK5 as seed ortholog is 100%.

Group of orthologs #1067. Best score 127 bits
Score difference with first non-orthologous sequence - P.jiroveci:127 P.troglodytes:127

L0PBQ0              	100.00%		H2QS72              	100.00%
Bootstrap support for L0PBQ0 as seed ortholog is 100%.
Bootstrap support for H2QS72 as seed ortholog is 100%.

Group of orthologs #1068. Best score 126 bits
Score difference with first non-orthologous sequence - P.jiroveci:126 P.troglodytes:126

L0PGC9              	100.00%		H2Q666              	100.00%
                    	       		H2QJ51              	82.16%
Bootstrap support for L0PGC9 as seed ortholog is 100%.
Bootstrap support for H2Q666 as seed ortholog is 100%.

Group of orthologs #1069. Best score 126 bits
Score difference with first non-orthologous sequence - P.jiroveci:126 P.troglodytes:126

L0P9L0              	100.00%		H2QA65              	100.00%
Bootstrap support for L0P9L0 as seed ortholog is 100%.
Bootstrap support for H2QA65 as seed ortholog is 100%.

Group of orthologs #1070. Best score 126 bits
Score difference with first non-orthologous sequence - P.jiroveci:126 P.troglodytes:40

L0PGC0              	100.00%		H2Q6E8              	100.00%
Bootstrap support for L0PGC0 as seed ortholog is 100%.
Bootstrap support for H2Q6E8 as seed ortholog is 93%.

Group of orthologs #1071. Best score 126 bits
Score difference with first non-orthologous sequence - P.jiroveci:126 P.troglodytes:126

L0P9F2              	100.00%		H2QSH8              	100.00%
Bootstrap support for L0P9F2 as seed ortholog is 100%.
Bootstrap support for H2QSH8 as seed ortholog is 100%.

Group of orthologs #1072. Best score 126 bits
Score difference with first non-orthologous sequence - P.jiroveci:49 P.troglodytes:59

L0PF38              	100.00%		H2QLR9              	100.00%
Bootstrap support for L0PF38 as seed ortholog is 96%.
Bootstrap support for H2QLR9 as seed ortholog is 98%.

Group of orthologs #1073. Best score 125 bits
Score difference with first non-orthologous sequence - P.jiroveci:125 P.troglodytes:125

L0PEP9              	100.00%		H2QMC4              	100.00%
                    	       		H2QCZ9              	88.79%
Bootstrap support for L0PEP9 as seed ortholog is 100%.
Bootstrap support for H2QMC4 as seed ortholog is 100%.

Group of orthologs #1074. Best score 125 bits
Score difference with first non-orthologous sequence - P.jiroveci:125 P.troglodytes:125

L0PDL2              	100.00%		H2QYD9              	100.00%
                    	       		Q6GVM3              	80.87%
Bootstrap support for L0PDL2 as seed ortholog is 100%.
Bootstrap support for H2QYD9 as seed ortholog is 100%.

Group of orthologs #1075. Best score 125 bits
Score difference with first non-orthologous sequence - P.jiroveci:125 P.troglodytes:125

L0PC89              	100.00%		H2R617              	100.00%
                    	       		H2QSR0              	30.00%
Bootstrap support for L0PC89 as seed ortholog is 100%.
Bootstrap support for H2R617 as seed ortholog is 100%.

Group of orthologs #1076. Best score 125 bits
Score difference with first non-orthologous sequence - P.jiroveci:125 P.troglodytes:125

L0PF00              	100.00%		H2QY35              	100.00%
Bootstrap support for L0PF00 as seed ortholog is 100%.
Bootstrap support for H2QY35 as seed ortholog is 100%.

Group of orthologs #1077. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 P.troglodytes:124

L0PFZ8              	100.00%		H2QBA5              	100.00%
                    	       		H2Q9K3              	6.32%
Bootstrap support for L0PFZ8 as seed ortholog is 100%.
Bootstrap support for H2QBA5 as seed ortholog is 100%.

Group of orthologs #1078. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 P.troglodytes:124

L0PAM9              	100.00%		H2R0J3              	100.00%
                    	       		H2R0R4              	52.48%
Bootstrap support for L0PAM9 as seed ortholog is 100%.
Bootstrap support for H2R0J3 as seed ortholog is 100%.

Group of orthologs #1079. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 P.troglodytes:124

L0PBH3              	100.00%		H2Q4W7              	100.00%
Bootstrap support for L0PBH3 as seed ortholog is 100%.
Bootstrap support for H2Q4W7 as seed ortholog is 100%.

Group of orthologs #1080. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 P.troglodytes:124

L0PFZ3              	100.00%		H2QFA3              	100.00%
Bootstrap support for L0PFZ3 as seed ortholog is 100%.
Bootstrap support for H2QFA3 as seed ortholog is 100%.

Group of orthologs #1081. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 P.troglodytes:124

L0PFP3              	100.00%		H2QRN0              	100.00%
Bootstrap support for L0PFP3 as seed ortholog is 100%.
Bootstrap support for H2QRN0 as seed ortholog is 100%.

Group of orthologs #1082. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 P.troglodytes:124

L0PG46              	100.00%		H2QXE8              	100.00%
Bootstrap support for L0PG46 as seed ortholog is 100%.
Bootstrap support for H2QXE8 as seed ortholog is 100%.

Group of orthologs #1083. Best score 124 bits
Score difference with first non-orthologous sequence - P.jiroveci:124 P.troglodytes:124

L0PD37              	100.00%		H2RBR9              	100.00%
Bootstrap support for L0PD37 as seed ortholog is 100%.
Bootstrap support for H2RBR9 as seed ortholog is 100%.

Group of orthologs #1084. Best score 123 bits
Score difference with first non-orthologous sequence - P.jiroveci:123 P.troglodytes:123

L0PCX0              	100.00%		H2PYQ2              	100.00%
Bootstrap support for L0PCX0 as seed ortholog is 100%.
Bootstrap support for H2PYQ2 as seed ortholog is 100%.

Group of orthologs #1085. Best score 123 bits
Score difference with first non-orthologous sequence - P.jiroveci:123 P.troglodytes:123

L0PB27              	100.00%		H2R9V1              	100.00%
Bootstrap support for L0PB27 as seed ortholog is 100%.
Bootstrap support for H2R9V1 as seed ortholog is 100%.

Group of orthologs #1086. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 P.troglodytes:52

L0PE76              	100.00%		H2R830              	100.00%
                    	       		H2Q1P4              	52.73%
Bootstrap support for L0PE76 as seed ortholog is 100%.
Bootstrap support for H2R830 as seed ortholog is 96%.

Group of orthologs #1087. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 P.troglodytes:122

L0PH76              	100.00%		H2Q2G8              	100.00%
Bootstrap support for L0PH76 as seed ortholog is 100%.
Bootstrap support for H2Q2G8 as seed ortholog is 100%.

Group of orthologs #1088. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 P.troglodytes:68

L0PEZ7              	100.00%		H2Q878              	100.00%
Bootstrap support for L0PEZ7 as seed ortholog is 100%.
Bootstrap support for H2Q878 as seed ortholog is 99%.

Group of orthologs #1089. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 P.troglodytes:122

L0PFD1              	100.00%		H2QAV7              	100.00%
Bootstrap support for L0PFD1 as seed ortholog is 100%.
Bootstrap support for H2QAV7 as seed ortholog is 100%.

Group of orthologs #1090. Best score 122 bits
Score difference with first non-orthologous sequence - P.jiroveci:122 P.troglodytes:122

L0PFD0              	100.00%		H2QSV1              	100.00%
Bootstrap support for L0PFD0 as seed ortholog is 100%.
Bootstrap support for H2QSV1 as seed ortholog is 100%.

Group of orthologs #1091. Best score 121 bits
Score difference with first non-orthologous sequence - P.jiroveci:121 P.troglodytes:121

L0PA90              	100.00%		H2R210              	100.00%
                    	       		H2Q2P3              	66.28%
                    	       		H2QP39              	56.45%
                    	       		H2QS34              	34.10%
                    	       		H2QPH5              	11.75%
                    	       		H2PYU7              	10.34%
                    	       		H2R6F7              	9.96%
                    	       		H2QXE4              	7.98%
                    	       		H2QT20              	7.09%
                    	       		H2R908              	6.96%
                    	       		H2QXG1              	6.45%
                    	       		Q5IS37              	6.32%
                    	       		H2QRS7              	6.07%
                    	       		H2R096              	5.68%
Bootstrap support for L0PA90 as seed ortholog is 100%.
Bootstrap support for H2R210 as seed ortholog is 100%.

Group of orthologs #1092. Best score 121 bits
Score difference with first non-orthologous sequence - P.jiroveci:121 P.troglodytes:121

L0P816              	100.00%		H2QRN4              	100.00%
                    	       		H2R4N0              	20.39%
Bootstrap support for L0P816 as seed ortholog is 100%.
Bootstrap support for H2QRN4 as seed ortholog is 100%.

Group of orthologs #1093. Best score 121 bits
Score difference with first non-orthologous sequence - P.jiroveci:121 P.troglodytes:121

L0PAK9              	100.00%		H2Q980              	100.00%
Bootstrap support for L0PAK9 as seed ortholog is 100%.
Bootstrap support for H2Q980 as seed ortholog is 100%.

Group of orthologs #1094. Best score 121 bits
Score difference with first non-orthologous sequence - P.jiroveci:121 P.troglodytes:121

L0PF16              	100.00%		H2QDJ0              	100.00%
Bootstrap support for L0PF16 as seed ortholog is 100%.
Bootstrap support for H2QDJ0 as seed ortholog is 100%.

Group of orthologs #1095. Best score 121 bits
Score difference with first non-orthologous sequence - P.jiroveci:121 P.troglodytes:121

L0P9A1              	100.00%		H2QSP4              	100.00%
Bootstrap support for L0P9A1 as seed ortholog is 100%.
Bootstrap support for H2QSP4 as seed ortholog is 100%.

Group of orthologs #1096. Best score 120 bits
Score difference with first non-orthologous sequence - P.jiroveci:120 P.troglodytes:120

L0PG04              	100.00%		H2RE79              	100.00%
                    	       		H2R9K0              	98.32%
                    	       		H2R9K5              	92.26%
                    	       		H2QAK3              	42.42%
Bootstrap support for L0PG04 as seed ortholog is 100%.
Bootstrap support for H2RE79 as seed ortholog is 100%.

Group of orthologs #1097. Best score 120 bits
Score difference with first non-orthologous sequence - P.jiroveci:120 P.troglodytes:120

L0P9B0              	100.00%		H2QIN2              	100.00%
Bootstrap support for L0P9B0 as seed ortholog is 100%.
Bootstrap support for H2QIN2 as seed ortholog is 100%.

Group of orthologs #1098. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 P.troglodytes:119

L0PFI5              	100.00%		H2QB46              	100.00%
Bootstrap support for L0PFI5 as seed ortholog is 100%.
Bootstrap support for H2QB46 as seed ortholog is 100%.

Group of orthologs #1099. Best score 119 bits
Score difference with first non-orthologous sequence - P.jiroveci:119 P.troglodytes:119

L0PAK0              	100.00%		H2R3E4              	100.00%
Bootstrap support for L0PAK0 as seed ortholog is 100%.
Bootstrap support for H2R3E4 as seed ortholog is 100%.

Group of orthologs #1100. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 P.troglodytes:118

L0PGB6              	100.00%		H2PXW4              	100.00%
L0PG66              	85.04%		
Bootstrap support for L0PGB6 as seed ortholog is 100%.
Bootstrap support for H2PXW4 as seed ortholog is 100%.

Group of orthologs #1101. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 P.troglodytes:118

L0PGF6              	100.00%		H2R2Q6              	100.00%
                    	       		H2QKF3              	40.97%
Bootstrap support for L0PGF6 as seed ortholog is 100%.
Bootstrap support for H2R2Q6 as seed ortholog is 100%.

Group of orthologs #1102. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 P.troglodytes:118

L0P9A7              	100.00%		H2QM39              	100.00%
Bootstrap support for L0P9A7 as seed ortholog is 100%.
Bootstrap support for H2QM39 as seed ortholog is 100%.

Group of orthologs #1103. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 P.troglodytes:118

L0PCI9              	100.00%		H2QKZ4              	100.00%
Bootstrap support for L0PCI9 as seed ortholog is 100%.
Bootstrap support for H2QKZ4 as seed ortholog is 100%.

Group of orthologs #1104. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 P.troglodytes:118

L0PD00              	100.00%		H2QSU8              	100.00%
Bootstrap support for L0PD00 as seed ortholog is 100%.
Bootstrap support for H2QSU8 as seed ortholog is 100%.

Group of orthologs #1105. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 P.troglodytes:118

L0PCY1              	100.00%		H2QWV9              	100.00%
Bootstrap support for L0PCY1 as seed ortholog is 100%.
Bootstrap support for H2QWV9 as seed ortholog is 100%.

Group of orthologs #1106. Best score 118 bits
Score difference with first non-orthologous sequence - P.jiroveci:118 P.troglodytes:10

L0PF58              	100.00%		H2R6J6              	100.00%
Bootstrap support for L0PF58 as seed ortholog is 100%.
Bootstrap support for H2R6J6 as seed ortholog is 63%.
Alternative seed ortholog is H2R0N7 (10 bits away from this cluster)

Group of orthologs #1107. Best score 117 bits
Score difference with first non-orthologous sequence - P.jiroveci:117 P.troglodytes:117

L0PGM7              	100.00%		H2QWL7              	100.00%
L0PGY6              	94.70%		
Bootstrap support for L0PGM7 as seed ortholog is 100%.
Bootstrap support for H2QWL7 as seed ortholog is 100%.

Group of orthologs #1108. Best score 117 bits
Score difference with first non-orthologous sequence - P.jiroveci:117 P.troglodytes:117

L0PEZ8              	100.00%		G2HH13              	100.00%
Bootstrap support for L0PEZ8 as seed ortholog is 100%.
Bootstrap support for G2HH13 as seed ortholog is 100%.

Group of orthologs #1109. Best score 117 bits
Score difference with first non-orthologous sequence - P.jiroveci:117 P.troglodytes:117

L0PE35              	100.00%		H2QFY4              	100.00%
Bootstrap support for L0PE35 as seed ortholog is 100%.
Bootstrap support for H2QFY4 as seed ortholog is 100%.

Group of orthologs #1110. Best score 117 bits
Score difference with first non-orthologous sequence - P.jiroveci:117 P.troglodytes:117

L0PF37              	100.00%		H2QFP7              	100.00%
Bootstrap support for L0PF37 as seed ortholog is 100%.
Bootstrap support for H2QFP7 as seed ortholog is 100%.

Group of orthologs #1111. Best score 116 bits
Score difference with first non-orthologous sequence - P.jiroveci:116 P.troglodytes:116

L0PFV9              	100.00%		H2RA97              	100.00%
                    	       		H2RCH3              	23.86%
Bootstrap support for L0PFV9 as seed ortholog is 100%.
Bootstrap support for H2RA97 as seed ortholog is 100%.

Group of orthologs #1112. Best score 115 bits
Score difference with first non-orthologous sequence - P.jiroveci:115 P.troglodytes:115

L0PHM1              	100.00%		H2Q7Y9              	100.00%
Bootstrap support for L0PHM1 as seed ortholog is 100%.
Bootstrap support for H2Q7Y9 as seed ortholog is 100%.

Group of orthologs #1113. Best score 115 bits
Score difference with first non-orthologous sequence - P.jiroveci:115 P.troglodytes:115

L0PHQ1              	100.00%		H2QBN2              	100.00%
Bootstrap support for L0PHQ1 as seed ortholog is 100%.
Bootstrap support for H2QBN2 as seed ortholog is 100%.

Group of orthologs #1114. Best score 114 bits
Score difference with first non-orthologous sequence - P.jiroveci:44 P.troglodytes:45

L0PDW3              	100.00%		H2Q903              	100.00%
                    	       		H2R7Z0              	78.82%
                    	       		H2QGC2              	52.34%
                    	       		H2R6X6              	20.73%
Bootstrap support for L0PDW3 as seed ortholog is 94%.
Bootstrap support for H2Q903 as seed ortholog is 95%.

Group of orthologs #1115. Best score 114 bits
Score difference with first non-orthologous sequence - P.jiroveci:114 P.troglodytes:114

L0P982              	100.00%		H2Q8H9              	100.00%
                    	       		H2R9A0              	100.00%
                    	       		H2QCJ6              	15.42%
Bootstrap support for L0P982 as seed ortholog is 100%.
Bootstrap support for H2Q8H9 as seed ortholog is 100%.
Bootstrap support for H2R9A0 as seed ortholog is 100%.

Group of orthologs #1116. Best score 114 bits
Score difference with first non-orthologous sequence - P.jiroveci:114 P.troglodytes:27

L0PAF2              	100.00%		H2R842              	100.00%
                    	       		H2QIA9              	11.48%
                    	       		H2Q1G1              	8.65%
Bootstrap support for L0PAF2 as seed ortholog is 100%.
Bootstrap support for H2R842 as seed ortholog is 79%.

Group of orthologs #1117. Best score 114 bits
Score difference with first non-orthologous sequence - P.jiroveci:114 P.troglodytes:114

L0PFW3              	100.00%		H2Q1B0              	100.00%
Bootstrap support for L0PFW3 as seed ortholog is 100%.
Bootstrap support for H2Q1B0 as seed ortholog is 100%.

Group of orthologs #1118. Best score 114 bits
Score difference with first non-orthologous sequence - P.jiroveci:10 P.troglodytes:114

L0PGP9              	100.00%		H2QYA2              	100.00%
Bootstrap support for L0PGP9 as seed ortholog is 61%.
Alternative seed ortholog is L0PA33 (10 bits away from this cluster)
Bootstrap support for H2QYA2 as seed ortholog is 100%.

Group of orthologs #1119. Best score 113 bits
Score difference with first non-orthologous sequence - P.jiroveci:113 P.troglodytes:113

L0PF05              	100.00%		H2Q0A3              	100.00%
                    	       		H2R878              	19.44%
Bootstrap support for L0PF05 as seed ortholog is 100%.
Bootstrap support for H2Q0A3 as seed ortholog is 100%.

Group of orthologs #1120. Best score 113 bits
Score difference with first non-orthologous sequence - P.jiroveci:113 P.troglodytes:113

L0PEW9              	100.00%		H2QZA0              	100.00%
                    	       		H2QPR9              	72.85%
Bootstrap support for L0PEW9 as seed ortholog is 100%.
Bootstrap support for H2QZA0 as seed ortholog is 100%.

Group of orthologs #1121. Best score 113 bits
Score difference with first non-orthologous sequence - P.jiroveci:113 P.troglodytes:113

L0PBK0              	100.00%		H2Q2W2              	100.00%
Bootstrap support for L0PBK0 as seed ortholog is 100%.
Bootstrap support for H2Q2W2 as seed ortholog is 100%.

Group of orthologs #1122. Best score 113 bits
Score difference with first non-orthologous sequence - P.jiroveci:113 P.troglodytes:11

L0P984              	100.00%		H2QHP9              	100.00%
Bootstrap support for L0P984 as seed ortholog is 100%.
Bootstrap support for H2QHP9 as seed ortholog is 62%.
Alternative seed ortholog is H2RAH6 (11 bits away from this cluster)

Group of orthologs #1123. Best score 113 bits
Score difference with first non-orthologous sequence - P.jiroveci:113 P.troglodytes:113

L0P997              	100.00%		H2QX51              	100.00%
Bootstrap support for L0P997 as seed ortholog is 100%.
Bootstrap support for H2QX51 as seed ortholog is 100%.

Group of orthologs #1124. Best score 112 bits
Score difference with first non-orthologous sequence - P.jiroveci:112 P.troglodytes:112

L0PD85              	100.00%		H2Q715              	100.00%
L0PGV7              	61.46%		
Bootstrap support for L0PD85 as seed ortholog is 100%.
Bootstrap support for H2Q715 as seed ortholog is 100%.

Group of orthologs #1125. Best score 112 bits
Score difference with first non-orthologous sequence - P.jiroveci:112 P.troglodytes:112

L0PEL6              	100.00%		H2R2Q0              	100.00%
Bootstrap support for L0PEL6 as seed ortholog is 100%.
Bootstrap support for H2R2Q0 as seed ortholog is 100%.

Group of orthologs #1126. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 P.troglodytes:32

L0P6Z0              	100.00%		H2QD12              	100.00%
                    	       		H2QIW3              	32.45%
                    	       		H2QX44              	15.75%
Bootstrap support for L0P6Z0 as seed ortholog is 100%.
Bootstrap support for H2QD12 as seed ortholog is 96%.

Group of orthologs #1127. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 P.troglodytes:111

L0PAT7              	100.00%		H2PZK2              	100.00%
                    	       		H2QP71              	8.56%
Bootstrap support for L0PAT7 as seed ortholog is 100%.
Bootstrap support for H2PZK2 as seed ortholog is 100%.

Group of orthologs #1128. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 P.troglodytes:111

L0PCC2              	100.00%		H2Q8Q5              	100.00%
                    	       		H2RAZ7              	17.63%
Bootstrap support for L0PCC2 as seed ortholog is 100%.
Bootstrap support for H2Q8Q5 as seed ortholog is 100%.

Group of orthologs #1129. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 P.troglodytes:111

L0PCZ2              	100.00%		H2QNQ8              	100.00%
                    	       		H2PXW3              	46.43%
Bootstrap support for L0PCZ2 as seed ortholog is 100%.
Bootstrap support for H2QNQ8 as seed ortholog is 100%.

Group of orthologs #1130. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:40 P.troglodytes:50

L0PFG2              	100.00%		H2QPD6              	100.00%
                    	       		H2RA26              	35.80%
Bootstrap support for L0PFG2 as seed ortholog is 91%.
Bootstrap support for H2QPD6 as seed ortholog is 94%.

Group of orthologs #1131. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 P.troglodytes:28

L0P8J9              	100.00%		H2QXP7              	100.00%
                    	       		H2PZG3              	35.20%
Bootstrap support for L0P8J9 as seed ortholog is 100%.
Bootstrap support for H2QXP7 as seed ortholog is 75%.

Group of orthologs #1132. Best score 111 bits
Score difference with first non-orthologous sequence - P.jiroveci:111 P.troglodytes:111

L0PD19              	100.00%		H2QEW6              	100.00%
Bootstrap support for L0PD19 as seed ortholog is 100%.
Bootstrap support for H2QEW6 as seed ortholog is 100%.

Group of orthologs #1133. Best score 110 bits
Score difference with first non-orthologous sequence - P.jiroveci:110 P.troglodytes:110

L0PF86              	100.00%		H2PZ21              	100.00%
L0PC10              	85.28%		
Bootstrap support for L0PF86 as seed ortholog is 100%.
Bootstrap support for H2PZ21 as seed ortholog is 100%.

Group of orthologs #1134. Best score 110 bits
Score difference with first non-orthologous sequence - P.jiroveci:110 P.troglodytes:110

L0P990              	100.00%		H2QK75              	100.00%
                    	       		H2QWC8              	51.53%
Bootstrap support for L0P990 as seed ortholog is 100%.
Bootstrap support for H2QK75 as seed ortholog is 100%.

Group of orthologs #1135. Best score 110 bits
Score difference with first non-orthologous sequence - P.jiroveci:110 P.troglodytes:110

L0PGP3              	100.00%		H2QKR7              	100.00%
Bootstrap support for L0PGP3 as seed ortholog is 100%.
Bootstrap support for H2QKR7 as seed ortholog is 100%.

Group of orthologs #1136. Best score 110 bits
Score difference with first non-orthologous sequence - P.jiroveci:110 P.troglodytes:110

L0PGR9              	100.00%		H2QTV3              	100.00%
Bootstrap support for L0PGR9 as seed ortholog is 100%.
Bootstrap support for H2QTV3 as seed ortholog is 100%.

Group of orthologs #1137. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 P.troglodytes:109

L0P6Z5              	100.00%		H2QW60              	100.00%
                    	       		H2QKU1              	57.55%
                    	       		H2R320              	46.94%
Bootstrap support for L0P6Z5 as seed ortholog is 100%.
Bootstrap support for H2QW60 as seed ortholog is 100%.

Group of orthologs #1138. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 P.troglodytes:109

L0P8T2              	100.00%		H2QW61              	100.00%
L0PA19              	81.36%		
Bootstrap support for L0P8T2 as seed ortholog is 100%.
Bootstrap support for H2QW61 as seed ortholog is 100%.

Group of orthologs #1139. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 P.troglodytes:109

L0PDW8              	100.00%		H2QPA9              	100.00%
Bootstrap support for L0PDW8 as seed ortholog is 100%.
Bootstrap support for H2QPA9 as seed ortholog is 100%.

Group of orthologs #1140. Best score 109 bits
Score difference with first non-orthologous sequence - P.jiroveci:109 P.troglodytes:109

L0PFF4              	100.00%		H2QTX1              	100.00%
Bootstrap support for L0PFF4 as seed ortholog is 100%.
Bootstrap support for H2QTX1 as seed ortholog is 100%.

Group of orthologs #1141. Best score 108 bits
Score difference with first non-orthologous sequence - P.jiroveci:108 P.troglodytes:25

L0PBU9              	100.00%		H2QJT5              	100.00%
                    	       		H2QHI6              	76.07%
Bootstrap support for L0PBU9 as seed ortholog is 100%.
Bootstrap support for H2QJT5 as seed ortholog is 95%.

Group of orthologs #1142. Best score 108 bits
Score difference with first non-orthologous sequence - P.jiroveci:108 P.troglodytes:108

L0PBA3              	100.00%		H2QRX5              	100.00%
Bootstrap support for L0PBA3 as seed ortholog is 100%.
Bootstrap support for H2QRX5 as seed ortholog is 100%.

Group of orthologs #1143. Best score 108 bits
Score difference with first non-orthologous sequence - P.jiroveci:108 P.troglodytes:108

L0PDB7              	100.00%		H2QU32              	100.00%
Bootstrap support for L0PDB7 as seed ortholog is 100%.
Bootstrap support for H2QU32 as seed ortholog is 100%.

Group of orthologs #1144. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:33 P.troglodytes:47

L0PBE1              	100.00%		H2QKA3              	100.00%
                    	       		H2QE79              	91.46%
                    	       		H2QE78              	89.43%
                    	       		H2QAX2              	26.02%
                    	       		H2QUI2              	25.20%
                    	       		H2QV56              	25.20%
                    	       		H2RCW4              	20.73%
Bootstrap support for L0PBE1 as seed ortholog is 93%.
Bootstrap support for H2QKA3 as seed ortholog is 99%.

Group of orthologs #1145. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 P.troglodytes:107

L0PBQ7              	100.00%		H2QUQ1              	100.00%
                    	       		H2QAZ2              	81.88%
                    	       		H2Q774              	56.82%
                    	       		H2Q3R5              	53.91%
                    	       		H2QTV4              	10.96%
                    	       		H2QMZ0              	8.95%
Bootstrap support for L0PBQ7 as seed ortholog is 100%.
Bootstrap support for H2QUQ1 as seed ortholog is 100%.

Group of orthologs #1146. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 P.troglodytes:107

L0PBW0              	100.00%		H2R952              	100.00%
L0PAA9              	5.39%		H2Q5D1              	20.35%
Bootstrap support for L0PBW0 as seed ortholog is 100%.
Bootstrap support for H2R952 as seed ortholog is 100%.

Group of orthologs #1147. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 P.troglodytes:107

L0P935              	100.00%		H2PYU4              	100.00%
Bootstrap support for L0P935 as seed ortholog is 100%.
Bootstrap support for H2PYU4 as seed ortholog is 100%.

Group of orthologs #1148. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 P.troglodytes:107

L0PB99              	100.00%		H2Q619              	100.00%
Bootstrap support for L0PB99 as seed ortholog is 100%.
Bootstrap support for H2Q619 as seed ortholog is 100%.

Group of orthologs #1149. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 P.troglodytes:31

L0P9W5              	100.00%		H2Q9B6              	100.00%
Bootstrap support for L0P9W5 as seed ortholog is 100%.
Bootstrap support for H2Q9B6 as seed ortholog is 70%.
Alternative seed ortholog is H2Q3I6 (31 bits away from this cluster)

Group of orthologs #1150. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 P.troglodytes:107

L0PAS1              	100.00%		H2QUT6              	100.00%
Bootstrap support for L0PAS1 as seed ortholog is 100%.
Bootstrap support for H2QUT6 as seed ortholog is 100%.

Group of orthologs #1151. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 P.troglodytes:107

L0P8L2              	100.00%		H2QXY9              	100.00%
Bootstrap support for L0P8L2 as seed ortholog is 100%.
Bootstrap support for H2QXY9 as seed ortholog is 100%.

Group of orthologs #1152. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 P.troglodytes:107

L0PBL2              	100.00%		H2R1F5              	100.00%
Bootstrap support for L0PBL2 as seed ortholog is 100%.
Bootstrap support for H2R1F5 as seed ortholog is 100%.

Group of orthologs #1153. Best score 107 bits
Score difference with first non-orthologous sequence - P.jiroveci:107 P.troglodytes:64

L0PEE1              	100.00%		H2RH63              	100.00%
Bootstrap support for L0PEE1 as seed ortholog is 100%.
Bootstrap support for H2RH63 as seed ortholog is 99%.

Group of orthologs #1154. Best score 106 bits
Score difference with first non-orthologous sequence - P.jiroveci:106 P.troglodytes:27

L0PD09              	100.00%		H2QDQ9              	100.00%
                    	       		H2QE46              	16.95%
                    	       		H2QC20              	16.52%
                    	       		H2Q6D2              	14.04%
                    	       		H2PZP3              	11.77%
                    	       		H2Q290              	11.56%
                    	       		H2QLN2              	11.34%
                    	       		H2Q1X9              	7.45%
                    	       		H2QJK2              	7.45%
                    	       		H2R2M8              	5.83%
Bootstrap support for L0PD09 as seed ortholog is 100%.
Bootstrap support for H2QDQ9 as seed ortholog is 78%.

Group of orthologs #1155. Best score 106 bits
Score difference with first non-orthologous sequence - P.jiroveci:106 P.troglodytes:106

L0PAM7              	100.00%		H2QI32              	100.00%
Bootstrap support for L0PAM7 as seed ortholog is 100%.
Bootstrap support for H2QI32 as seed ortholog is 100%.

Group of orthologs #1156. Best score 106 bits
Score difference with first non-orthologous sequence - P.jiroveci:106 P.troglodytes:106

L0PF45              	100.00%		H2QJD3              	100.00%
Bootstrap support for L0PF45 as seed ortholog is 100%.
Bootstrap support for H2QJD3 as seed ortholog is 100%.

Group of orthologs #1157. Best score 106 bits
Score difference with first non-orthologous sequence - P.jiroveci:106 P.troglodytes:106

L0PBQ3              	100.00%		H2QYB5              	100.00%
Bootstrap support for L0PBQ3 as seed ortholog is 100%.
Bootstrap support for H2QYB5 as seed ortholog is 100%.

Group of orthologs #1158. Best score 106 bits
Score difference with first non-orthologous sequence - P.jiroveci:106 P.troglodytes:106

L0PGS9              	100.00%		H2R8X3              	100.00%
Bootstrap support for L0PGS9 as seed ortholog is 100%.
Bootstrap support for H2R8X3 as seed ortholog is 100%.

Group of orthologs #1159. Best score 105 bits
Score difference with first non-orthologous sequence - P.jiroveci:105 P.troglodytes:16

L0PCL8              	100.00%		H2Q2J3              	100.00%
                    	       		H2QS03              	21.81%
                    	       		H2Q1R1              	7.31%
Bootstrap support for L0PCL8 as seed ortholog is 100%.
Bootstrap support for H2Q2J3 as seed ortholog is 63%.
Alternative seed ortholog is A4K2N7 (16 bits away from this cluster)

Group of orthologs #1160. Best score 105 bits
Score difference with first non-orthologous sequence - P.jiroveci:105 P.troglodytes:105

L0P8J6              	100.00%		H2R7H7              	100.00%
Bootstrap support for L0P8J6 as seed ortholog is 100%.
Bootstrap support for H2R7H7 as seed ortholog is 100%.

Group of orthologs #1161. Best score 105 bits
Score difference with first non-orthologous sequence - P.jiroveci:105 P.troglodytes:105

L0P9Z6              	100.00%		H2R880              	100.00%
Bootstrap support for L0P9Z6 as seed ortholog is 100%.
Bootstrap support for H2R880 as seed ortholog is 100%.

Group of orthologs #1162. Best score 105 bits
Score difference with first non-orthologous sequence - P.jiroveci:105 P.troglodytes:105

L0PAN5              	100.00%		H2R816              	100.00%
Bootstrap support for L0PAN5 as seed ortholog is 100%.
Bootstrap support for H2R816 as seed ortholog is 100%.

Group of orthologs #1163. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 P.troglodytes:25

L0P9X1              	100.00%		H2QM99              	100.00%
                    	       		H2R249              	7.02%
                    	       		H2QK55              	5.45%
Bootstrap support for L0P9X1 as seed ortholog is 100%.
Bootstrap support for H2QM99 as seed ortholog is 68%.
Alternative seed ortholog is H2QUW8 (25 bits away from this cluster)

Group of orthologs #1164. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 P.troglodytes:7

L0PD86              	100.00%		H2Q4Q7              	100.00%
Bootstrap support for L0PD86 as seed ortholog is 100%.
Bootstrap support for H2Q4Q7 as seed ortholog is 64%.
Alternative seed ortholog is H2QFB4 (7 bits away from this cluster)

Group of orthologs #1165. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 P.troglodytes:104

L0PFK4              	100.00%		H2QFZ0              	100.00%
Bootstrap support for L0PFK4 as seed ortholog is 100%.
Bootstrap support for H2QFZ0 as seed ortholog is 100%.

Group of orthologs #1166. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 P.troglodytes:104

L0P8Q1              	100.00%		H2QXJ4              	100.00%
Bootstrap support for L0P8Q1 as seed ortholog is 100%.
Bootstrap support for H2QXJ4 as seed ortholog is 100%.

Group of orthologs #1167. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 P.troglodytes:104

L0PCV9              	100.00%		H2QWK7              	100.00%
Bootstrap support for L0PCV9 as seed ortholog is 100%.
Bootstrap support for H2QWK7 as seed ortholog is 100%.

Group of orthologs #1168. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 P.troglodytes:104

L0PFT4              	100.00%		H2QYV2              	100.00%
Bootstrap support for L0PFT4 as seed ortholog is 100%.
Bootstrap support for H2QYV2 as seed ortholog is 100%.

Group of orthologs #1169. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 P.troglodytes:104

L0PCX8              	100.00%		H2R9M0              	100.00%
Bootstrap support for L0PCX8 as seed ortholog is 100%.
Bootstrap support for H2R9M0 as seed ortholog is 100%.

Group of orthologs #1170. Best score 104 bits
Score difference with first non-orthologous sequence - P.jiroveci:104 P.troglodytes:104

L0PCT2              	100.00%		H2RBJ7              	100.00%
Bootstrap support for L0PCT2 as seed ortholog is 100%.
Bootstrap support for H2RBJ7 as seed ortholog is 100%.

Group of orthologs #1171. Best score 103 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 P.troglodytes:103

L0PC19              	100.00%		H2QZ21              	100.00%
                    	       		H2RI40              	24.93%
Bootstrap support for L0PC19 as seed ortholog is 100%.
Bootstrap support for H2QZ21 as seed ortholog is 100%.

Group of orthologs #1172. Best score 103 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 P.troglodytes:103

L0PEL9              	100.00%		H2PZY3              	100.00%
Bootstrap support for L0PEL9 as seed ortholog is 100%.
Bootstrap support for H2PZY3 as seed ortholog is 100%.

Group of orthologs #1173. Best score 103 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 P.troglodytes:103

L0PDI3              	100.00%		H2QNB9              	100.00%
Bootstrap support for L0PDI3 as seed ortholog is 100%.
Bootstrap support for H2QNB9 as seed ortholog is 100%.

Group of orthologs #1174. Best score 103 bits
Score difference with first non-orthologous sequence - P.jiroveci:103 P.troglodytes:103

L0P8G4              	100.00%		H2RIH6              	100.00%
Bootstrap support for L0P8G4 as seed ortholog is 100%.
Bootstrap support for H2RIH6 as seed ortholog is 100%.

Group of orthologs #1175. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:102 P.troglodytes:102

L0P9H0              	100.00%		H2Q9Q0              	100.00%
Bootstrap support for L0P9H0 as seed ortholog is 100%.
Bootstrap support for H2Q9Q0 as seed ortholog is 100%.

Group of orthologs #1176. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:102 P.troglodytes:102

L0P9F1              	100.00%		H2QF34              	100.00%
Bootstrap support for L0P9F1 as seed ortholog is 100%.
Bootstrap support for H2QF34 as seed ortholog is 100%.

Group of orthologs #1177. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:102 P.troglodytes:102

L0PFM0              	100.00%		H2QFU2              	100.00%
Bootstrap support for L0PFM0 as seed ortholog is 100%.
Bootstrap support for H2QFU2 as seed ortholog is 100%.

Group of orthologs #1178. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:102 P.troglodytes:102

L0PHI8              	100.00%		H2QT17              	100.00%
Bootstrap support for L0PHI8 as seed ortholog is 100%.
Bootstrap support for H2QT17 as seed ortholog is 100%.

Group of orthologs #1179. Best score 102 bits
Score difference with first non-orthologous sequence - P.jiroveci:102 P.troglodytes:36

L0PEZ6              	100.00%		H2RCH2              	100.00%
Bootstrap support for L0PEZ6 as seed ortholog is 100%.
Bootstrap support for H2RCH2 as seed ortholog is 84%.

Group of orthologs #1180. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 P.troglodytes:101

L0PFG4              	100.00%		H2QVC3              	100.00%
L0P939              	38.82%		
Bootstrap support for L0PFG4 as seed ortholog is 100%.
Bootstrap support for H2QVC3 as seed ortholog is 100%.

Group of orthologs #1181. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 P.troglodytes:101

L0PE10              	100.00%		H2Q8M7              	100.00%
Bootstrap support for L0PE10 as seed ortholog is 100%.
Bootstrap support for H2Q8M7 as seed ortholog is 100%.

Group of orthologs #1182. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 P.troglodytes:101

L0P9R5              	100.00%		H2QG57              	100.00%
Bootstrap support for L0P9R5 as seed ortholog is 100%.
Bootstrap support for H2QG57 as seed ortholog is 100%.

Group of orthologs #1183. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 P.troglodytes:101

L0P7T7              	100.00%		H2QXA5              	100.00%
Bootstrap support for L0P7T7 as seed ortholog is 100%.
Bootstrap support for H2QXA5 as seed ortholog is 100%.

Group of orthologs #1184. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 P.troglodytes:38

L0P9W7              	100.00%		H2QXP0              	100.00%
Bootstrap support for L0P9W7 as seed ortholog is 100%.
Bootstrap support for H2QXP0 as seed ortholog is 93%.

Group of orthologs #1185. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 P.troglodytes:101

L0PEV0              	100.00%		H2QV89              	100.00%
Bootstrap support for L0PEV0 as seed ortholog is 100%.
Bootstrap support for H2QV89 as seed ortholog is 100%.

Group of orthologs #1186. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:101 P.troglodytes:101

L0PF95              	100.00%		H2QWP4              	100.00%
Bootstrap support for L0PF95 as seed ortholog is 100%.
Bootstrap support for H2QWP4 as seed ortholog is 100%.

Group of orthologs #1187. Best score 101 bits
Score difference with first non-orthologous sequence - P.jiroveci:29 P.troglodytes:101

L0PD30              	100.00%		H2RHJ8              	100.00%
Bootstrap support for L0PD30 as seed ortholog is 84%.
Bootstrap support for H2RHJ8 as seed ortholog is 100%.

Group of orthologs #1188. Best score 100 bits
Score difference with first non-orthologous sequence - P.jiroveci:100 P.troglodytes:100

L0P8Q8              	100.00%		H2RBA4              	100.00%
                    	       		H2R963              	38.06%
                    	       		H2QHI3              	8.08%
Bootstrap support for L0P8Q8 as seed ortholog is 100%.
Bootstrap support for H2RBA4 as seed ortholog is 100%.

Group of orthologs #1189. Best score 100 bits
Score difference with first non-orthologous sequence - P.jiroveci:100 P.troglodytes:100

L0PD96              	100.00%		H2QHI7              	100.00%
Bootstrap support for L0PD96 as seed ortholog is 100%.
Bootstrap support for H2QHI7 as seed ortholog is 100%.

Group of orthologs #1190. Best score 100 bits
Score difference with first non-orthologous sequence - P.jiroveci:100 P.troglodytes:41

L0PE14              	100.00%		H2RA83              	100.00%
Bootstrap support for L0PE14 as seed ortholog is 100%.
Bootstrap support for H2RA83 as seed ortholog is 99%.

Group of orthologs #1191. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 P.troglodytes:16

L0PCM4              	100.00%		H2QNW6              	100.00%
                    	       		H2QU97              	52.54%
Bootstrap support for L0PCM4 as seed ortholog is 100%.
Bootstrap support for H2QNW6 as seed ortholog is 79%.

Group of orthologs #1192. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 P.troglodytes:99

L0PB92              	100.00%		H2QSB7              	100.00%
                    	       		H2Q4I0              	21.17%
Bootstrap support for L0PB92 as seed ortholog is 100%.
Bootstrap support for H2QSB7 as seed ortholog is 100%.

Group of orthologs #1193. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 P.troglodytes:99

L0PDI9              	100.00%		H2R5Z9              	100.00%
                    	       		H2QV40              	25.32%
Bootstrap support for L0PDI9 as seed ortholog is 100%.
Bootstrap support for H2R5Z9 as seed ortholog is 100%.

Group of orthologs #1194. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 P.troglodytes:99

L0P868              	100.00%		H2QW29              	100.00%
Bootstrap support for L0P868 as seed ortholog is 100%.
Bootstrap support for H2QW29 as seed ortholog is 100%.

Group of orthologs #1195. Best score 99 bits
Score difference with first non-orthologous sequence - P.jiroveci:99 P.troglodytes:99

L0PCQ4              	100.00%		H2QZU9              	100.00%
Bootstrap support for L0PCQ4 as seed ortholog is 100%.
Bootstrap support for H2QZU9 as seed ortholog is 100%.

Group of orthologs #1196. Best score 98 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 P.troglodytes:98

L0PC01              	100.00%		H2QMN1              	100.00%
                    	       		H2QYI6              	20.38%
                    	       		H2QMN0              	13.07%
Bootstrap support for L0PC01 as seed ortholog is 100%.
Bootstrap support for H2QMN1 as seed ortholog is 100%.

Group of orthologs #1197. Best score 98 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 P.troglodytes:98

L0PF90              	100.00%		H2Q3V9              	100.00%
                    	       		H2QHT5              	50.56%
Bootstrap support for L0PF90 as seed ortholog is 100%.
Bootstrap support for H2Q3V9 as seed ortholog is 100%.

Group of orthologs #1198. Best score 98 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 P.troglodytes:98

L0PE32              	100.00%		H2QLD9              	100.00%
Bootstrap support for L0PE32 as seed ortholog is 100%.
Bootstrap support for H2QLD9 as seed ortholog is 100%.

Group of orthologs #1199. Best score 98 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 P.troglodytes:98

L0PBX4              	100.00%		H2QT40              	100.00%
Bootstrap support for L0PBX4 as seed ortholog is 100%.
Bootstrap support for H2QT40 as seed ortholog is 100%.

Group of orthologs #1200. Best score 98 bits
Score difference with first non-orthologous sequence - P.jiroveci:98 P.troglodytes:98

L0P7Q2              	100.00%		H2RDR7              	100.00%
Bootstrap support for L0P7Q2 as seed ortholog is 100%.
Bootstrap support for H2RDR7 as seed ortholog is 100%.

Group of orthologs #1201. Best score 97 bits
Score difference with first non-orthologous sequence - P.jiroveci:97 P.troglodytes:97

L0P7W8              	100.00%		H2QSV3              	100.00%
L0P8R2              	100.00%		
Bootstrap support for L0P7W8 as seed ortholog is 100%.
Bootstrap support for L0P8R2 as seed ortholog is 100%.
Bootstrap support for H2QSV3 as seed ortholog is 100%.

Group of orthologs #1202. Best score 97 bits
Score difference with first non-orthologous sequence - P.jiroveci:97 P.troglodytes:97

L0PGF4              	100.00%		H2Q2R4              	100.00%
Bootstrap support for L0PGF4 as seed ortholog is 100%.
Bootstrap support for H2Q2R4 as seed ortholog is 100%.

Group of orthologs #1203. Best score 97 bits
Score difference with first non-orthologous sequence - P.jiroveci:97 P.troglodytes:97

L0PAV4              	100.00%		H2Q938              	100.00%
Bootstrap support for L0PAV4 as seed ortholog is 100%.
Bootstrap support for H2Q938 as seed ortholog is 100%.

Group of orthologs #1204. Best score 97 bits
Score difference with first non-orthologous sequence - P.jiroveci:97 P.troglodytes:97

L0PBK9              	100.00%		H2QEU1              	100.00%
Bootstrap support for L0PBK9 as seed ortholog is 100%.
Bootstrap support for H2QEU1 as seed ortholog is 100%.

Group of orthologs #1205. Best score 97 bits
Score difference with first non-orthologous sequence - P.jiroveci:97 P.troglodytes:50

L0P9D5              	100.00%		H2QYQ5              	100.00%
Bootstrap support for L0P9D5 as seed ortholog is 100%.
Bootstrap support for H2QYQ5 as seed ortholog is 90%.

Group of orthologs #1206. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 P.troglodytes:96

L0PB42              	100.00%		H2QL52              	100.00%
                    	       		H2RG60              	76.52%
Bootstrap support for L0PB42 as seed ortholog is 100%.
Bootstrap support for H2QL52 as seed ortholog is 100%.

Group of orthologs #1207. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 P.troglodytes:96

L0P8Y9              	100.00%		H2RCC8              	100.00%
                    	       		H2QE90              	47.92%
Bootstrap support for L0P8Y9 as seed ortholog is 100%.
Bootstrap support for H2RCC8 as seed ortholog is 100%.

Group of orthologs #1208. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 P.troglodytes:96

L0P7D7              	100.00%		H2QY72              	100.00%
Bootstrap support for L0P7D7 as seed ortholog is 100%.
Bootstrap support for H2QY72 as seed ortholog is 100%.

Group of orthologs #1209. Best score 96 bits
Score difference with first non-orthologous sequence - P.jiroveci:96 P.troglodytes:96

L0PG13              	100.00%		H2RHV5              	100.00%
Bootstrap support for L0PG13 as seed ortholog is 100%.
Bootstrap support for H2RHV5 as seed ortholog is 100%.

Group of orthologs #1210. Best score 95 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 P.troglodytes:95

L0PBD3              	100.00%		H2QVS6              	100.00%
                    	       		H2Q799              	57.27%
                    	       		H2QYT8              	35.98%
Bootstrap support for L0PBD3 as seed ortholog is 100%.
Bootstrap support for H2QVS6 as seed ortholog is 100%.

Group of orthologs #1211. Best score 95 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 P.troglodytes:95

L0PFT3              	100.00%		H2Q748              	100.00%
Bootstrap support for L0PFT3 as seed ortholog is 100%.
Bootstrap support for H2Q748 as seed ortholog is 100%.

Group of orthologs #1212. Best score 95 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 P.troglodytes:95

L0PBX3              	100.00%		H2QD27              	100.00%
Bootstrap support for L0PBX3 as seed ortholog is 100%.
Bootstrap support for H2QD27 as seed ortholog is 100%.

Group of orthologs #1213. Best score 95 bits
Score difference with first non-orthologous sequence - P.jiroveci:95 P.troglodytes:95

L0PBZ3              	100.00%		H2R991              	100.00%
Bootstrap support for L0PBZ3 as seed ortholog is 100%.
Bootstrap support for H2R991 as seed ortholog is 100%.

Group of orthologs #1214. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 P.troglodytes:94

L0PDY4              	100.00%		H2QS36              	100.00%
                    	       		H2QID3              	43.37%
                    	       		H2QEL7              	9.94%
Bootstrap support for L0PDY4 as seed ortholog is 100%.
Bootstrap support for H2QS36 as seed ortholog is 100%.

Group of orthologs #1215. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 P.troglodytes:94

L0PB59              	100.00%		H2QDX5              	100.00%
                    	       		H2R2N1              	50.14%
Bootstrap support for L0PB59 as seed ortholog is 100%.
Bootstrap support for H2QDX5 as seed ortholog is 100%.

Group of orthologs #1216. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 P.troglodytes:94

L0PCF7              	100.00%		H2Q8B7              	100.00%
Bootstrap support for L0PCF7 as seed ortholog is 100%.
Bootstrap support for H2Q8B7 as seed ortholog is 100%.

Group of orthologs #1217. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 P.troglodytes:94

L0PBX5              	100.00%		H2QAD1              	100.00%
Bootstrap support for L0PBX5 as seed ortholog is 100%.
Bootstrap support for H2QAD1 as seed ortholog is 100%.

Group of orthologs #1218. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 P.troglodytes:94

L0PHZ2              	100.00%		H2QAP5              	100.00%
Bootstrap support for L0PHZ2 as seed ortholog is 100%.
Bootstrap support for H2QAP5 as seed ortholog is 100%.

Group of orthologs #1219. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 P.troglodytes:94

L0PCQ5              	100.00%		H2QI24              	100.00%
Bootstrap support for L0PCQ5 as seed ortholog is 100%.
Bootstrap support for H2QI24 as seed ortholog is 100%.

Group of orthologs #1220. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 P.troglodytes:94

L0PCB4              	100.00%		H2QYT9              	100.00%
Bootstrap support for L0PCB4 as seed ortholog is 100%.
Bootstrap support for H2QYT9 as seed ortholog is 100%.

Group of orthologs #1221. Best score 94 bits
Score difference with first non-orthologous sequence - P.jiroveci:94 P.troglodytes:94

L0PF82              	100.00%		H2QZD7              	100.00%
Bootstrap support for L0PF82 as seed ortholog is 100%.
Bootstrap support for H2QZD7 as seed ortholog is 100%.

Group of orthologs #1222. Best score 93 bits
Score difference with first non-orthologous sequence - P.jiroveci:93 P.troglodytes:93

L0P8Z4              	100.00%		H2PY71              	100.00%
Bootstrap support for L0P8Z4 as seed ortholog is 100%.
Bootstrap support for H2PY71 as seed ortholog is 100%.

Group of orthologs #1223. Best score 93 bits
Score difference with first non-orthologous sequence - P.jiroveci:93 P.troglodytes:93

L0PAW5              	100.00%		H2QFB2              	100.00%
Bootstrap support for L0PAW5 as seed ortholog is 100%.
Bootstrap support for H2QFB2 as seed ortholog is 100%.

Group of orthologs #1224. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 P.troglodytes:92

L0PB06              	100.00%		G2HEI7              	100.00%
Bootstrap support for L0PB06 as seed ortholog is 100%.
Bootstrap support for G2HEI7 as seed ortholog is 100%.

Group of orthologs #1225. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 P.troglodytes:92

L0PD23              	100.00%		H2Q6F9              	100.00%
Bootstrap support for L0PD23 as seed ortholog is 100%.
Bootstrap support for H2Q6F9 as seed ortholog is 100%.

Group of orthologs #1226. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 P.troglodytes:92

L0PEX4              	100.00%		H2Q797              	100.00%
Bootstrap support for L0PEX4 as seed ortholog is 100%.
Bootstrap support for H2Q797 as seed ortholog is 100%.

Group of orthologs #1227. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 P.troglodytes:92

L0P995              	100.00%		H2QM53              	100.00%
Bootstrap support for L0P995 as seed ortholog is 100%.
Bootstrap support for H2QM53 as seed ortholog is 100%.

Group of orthologs #1228. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 P.troglodytes:40

L0PFQ6              	100.00%		H2QY53              	100.00%
Bootstrap support for L0PFQ6 as seed ortholog is 100%.
Bootstrap support for H2QY53 as seed ortholog is 88%.

Group of orthologs #1229. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 P.troglodytes:92

L0PFC4              	100.00%		H2QZ05              	100.00%
Bootstrap support for L0PFC4 as seed ortholog is 100%.
Bootstrap support for H2QZ05 as seed ortholog is 100%.

Group of orthologs #1230. Best score 92 bits
Score difference with first non-orthologous sequence - P.jiroveci:92 P.troglodytes:92

L0PHU9              	100.00%		Q0MQB1              	100.00%
Bootstrap support for L0PHU9 as seed ortholog is 100%.
Bootstrap support for Q0MQB1 as seed ortholog is 100%.

Group of orthologs #1231. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 P.troglodytes:91

L0PG18              	100.00%		H2R426              	100.00%
                    	       		H2QKB9              	61.57%
Bootstrap support for L0PG18 as seed ortholog is 100%.
Bootstrap support for H2R426 as seed ortholog is 100%.

Group of orthologs #1232. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 P.troglodytes:91

L0PFK1              	100.00%		H2R7X0              	100.00%
                    	       		H2Q7H9              	33.57%
Bootstrap support for L0PFK1 as seed ortholog is 100%.
Bootstrap support for H2R7X0 as seed ortholog is 100%.

Group of orthologs #1233. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 P.troglodytes:35

L0PDE3              	100.00%		H2QUQ9              	100.00%
Bootstrap support for L0PDE3 as seed ortholog is 100%.
Bootstrap support for H2QUQ9 as seed ortholog is 92%.

Group of orthologs #1234. Best score 91 bits
Score difference with first non-orthologous sequence - P.jiroveci:91 P.troglodytes:91

L0PCG6              	100.00%		H2R9M3              	100.00%
Bootstrap support for L0PCG6 as seed ortholog is 100%.
Bootstrap support for H2R9M3 as seed ortholog is 100%.

Group of orthologs #1235. Best score 90 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 P.troglodytes:90

L0PDD4              	100.00%		H2QXF4              	100.00%
                    	       		H2Q059              	65.48%
Bootstrap support for L0PDD4 as seed ortholog is 100%.
Bootstrap support for H2QXF4 as seed ortholog is 100%.

Group of orthologs #1236. Best score 90 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 P.troglodytes:90

L0P9A5              	100.00%		H2Q0F8              	100.00%
Bootstrap support for L0P9A5 as seed ortholog is 100%.
Bootstrap support for H2Q0F8 as seed ortholog is 100%.

Group of orthologs #1237. Best score 90 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 P.troglodytes:90

L0PF35              	100.00%		H2PZ90              	100.00%
Bootstrap support for L0PF35 as seed ortholog is 100%.
Bootstrap support for H2PZ90 as seed ortholog is 100%.

Group of orthologs #1238. Best score 90 bits
Score difference with first non-orthologous sequence - P.jiroveci:90 P.troglodytes:90

L0P8A1              	100.00%		H2QG96              	100.00%
Bootstrap support for L0P8A1 as seed ortholog is 100%.
Bootstrap support for H2QG96 as seed ortholog is 100%.

Group of orthologs #1239. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 P.troglodytes:23

L0P8W8              	100.00%		H2Q175              	100.00%
L0P9K5              	55.32%		H2Q8C1              	5.53%
Bootstrap support for L0P8W8 as seed ortholog is 100%.
Bootstrap support for H2Q175 as seed ortholog is 79%.

Group of orthologs #1240. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 P.troglodytes:12

L0PED1              	100.00%		H2Q6T9              	100.00%
                    	       		H2QKW5              	5.80%
Bootstrap support for L0PED1 as seed ortholog is 100%.
Bootstrap support for H2Q6T9 as seed ortholog is 65%.
Alternative seed ortholog is H2R727 (12 bits away from this cluster)

Group of orthologs #1241. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 P.troglodytes:36

L0PD56              	100.00%		H2Q8A3              	100.00%
                    	       		H2QK43              	100.00%
Bootstrap support for L0PD56 as seed ortholog is 100%.
Bootstrap support for H2Q8A3 as seed ortholog is 83%.
Bootstrap support for H2QK43 as seed ortholog is 83%.

Group of orthologs #1242. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 P.troglodytes:89

L0PHH5              	100.00%		H2QEP8              	100.00%
                    	       		H2QBF2              	26.84%
Bootstrap support for L0PHH5 as seed ortholog is 100%.
Bootstrap support for H2QEP8 as seed ortholog is 100%.

Group of orthologs #1243. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 P.troglodytes:89

L0PFM9              	100.00%		Q3I233              	100.00%
                    	       		H2RIB2              	15.27%
Bootstrap support for L0PFM9 as seed ortholog is 100%.
Bootstrap support for Q3I233 as seed ortholog is 100%.

Group of orthologs #1244. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 P.troglodytes:18

L0PAT3              	100.00%		H2Q0L8              	100.00%
Bootstrap support for L0PAT3 as seed ortholog is 100%.
Bootstrap support for H2Q0L8 as seed ortholog is 89%.

Group of orthologs #1245. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 P.troglodytes:89

L0PEF8              	100.00%		G2HIN0              	100.00%
Bootstrap support for L0PEF8 as seed ortholog is 100%.
Bootstrap support for G2HIN0 as seed ortholog is 100%.

Group of orthologs #1246. Best score 89 bits
Score difference with first non-orthologous sequence - P.jiroveci:89 P.troglodytes:89

L0P921              	100.00%		H2R3L8              	100.00%
Bootstrap support for L0P921 as seed ortholog is 100%.
Bootstrap support for H2R3L8 as seed ortholog is 100%.

Group of orthologs #1247. Best score 88 bits
Score difference with first non-orthologous sequence - P.jiroveci:88 P.troglodytes:88

L0PFF2              	100.00%		H2R0L3              	100.00%
Bootstrap support for L0PFF2 as seed ortholog is 100%.
Bootstrap support for H2R0L3 as seed ortholog is 100%.

Group of orthologs #1248. Best score 88 bits
Score difference with first non-orthologous sequence - P.jiroveci:88 P.troglodytes:88

L0PCB5              	100.00%		H2R676              	100.00%
Bootstrap support for L0PCB5 as seed ortholog is 100%.
Bootstrap support for H2R676 as seed ortholog is 100%.

Group of orthologs #1249. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 P.troglodytes:87

L0PAT8              	100.00%		H2Q3C8              	100.00%
Bootstrap support for L0PAT8 as seed ortholog is 100%.
Bootstrap support for H2Q3C8 as seed ortholog is 100%.

Group of orthologs #1250. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 P.troglodytes:87

L0PGB3              	100.00%		H2Q082              	100.00%
Bootstrap support for L0PGB3 as seed ortholog is 100%.
Bootstrap support for H2Q082 as seed ortholog is 100%.

Group of orthologs #1251. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 P.troglodytes:87

L0P6X4              	100.00%		H2QBF9              	100.00%
Bootstrap support for L0P6X4 as seed ortholog is 100%.
Bootstrap support for H2QBF9 as seed ortholog is 100%.

Group of orthologs #1252. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 P.troglodytes:87

L0PEF7              	100.00%		H2Q4X3              	100.00%
Bootstrap support for L0PEF7 as seed ortholog is 100%.
Bootstrap support for H2Q4X3 as seed ortholog is 100%.

Group of orthologs #1253. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 P.troglodytes:87

L0PFF3              	100.00%		H2QBQ9              	100.00%
Bootstrap support for L0PFF3 as seed ortholog is 100%.
Bootstrap support for H2QBQ9 as seed ortholog is 100%.

Group of orthologs #1254. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 P.troglodytes:87

L0PA96              	100.00%		H2QX68              	100.00%
Bootstrap support for L0PA96 as seed ortholog is 100%.
Bootstrap support for H2QX68 as seed ortholog is 100%.

Group of orthologs #1255. Best score 87 bits
Score difference with first non-orthologous sequence - P.jiroveci:87 P.troglodytes:87

L0PFB0              	100.00%		H2QU29              	100.00%
Bootstrap support for L0PFB0 as seed ortholog is 100%.
Bootstrap support for H2QU29 as seed ortholog is 100%.

Group of orthologs #1256. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 P.troglodytes:37

L0PE88              	100.00%		H2QIH6              	100.00%
                    	       		G2HIJ7              	54.16%
                    	       		H2PYQ1              	48.80%
Bootstrap support for L0PE88 as seed ortholog is 100%.
Bootstrap support for H2QIH6 as seed ortholog is 90%.

Group of orthologs #1257. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 P.troglodytes:26

L0PCN8              	100.00%		H2R0D0              	100.00%
                    	       		H2RD09              	48.06%
                    	       		H2QF79              	43.04%
Bootstrap support for L0PCN8 as seed ortholog is 100%.
Bootstrap support for H2R0D0 as seed ortholog is 79%.

Group of orthologs #1258. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 P.troglodytes:86

L0P887              	100.00%		H2Q3Y7              	100.00%
                    	       		H2Q8U6              	25.51%
Bootstrap support for L0P887 as seed ortholog is 100%.
Bootstrap support for H2Q3Y7 as seed ortholog is 100%.

Group of orthologs #1259. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 P.troglodytes:86

L0PBC9              	100.00%		H2Q2K2              	100.00%
Bootstrap support for L0PBC9 as seed ortholog is 100%.
Bootstrap support for H2Q2K2 as seed ortholog is 100%.

Group of orthologs #1260. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 P.troglodytes:35

L0PBA1              	100.00%		H2R412              	100.00%
Bootstrap support for L0PBA1 as seed ortholog is 100%.
Bootstrap support for H2R412 as seed ortholog is 94%.

Group of orthologs #1261. Best score 86 bits
Score difference with first non-orthologous sequence - P.jiroveci:86 P.troglodytes:86

L0PAW3              	100.00%		H2R632              	100.00%
Bootstrap support for L0PAW3 as seed ortholog is 100%.
Bootstrap support for H2R632 as seed ortholog is 100%.

Group of orthologs #1262. Best score 85 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 P.troglodytes:85

L0PGK9              	100.00%		H2R4L7              	100.00%
                    	       		H2QIP5              	80.14%
Bootstrap support for L0PGK9 as seed ortholog is 100%.
Bootstrap support for H2R4L7 as seed ortholog is 100%.

Group of orthologs #1263. Best score 85 bits
Score difference with first non-orthologous sequence - P.jiroveci:85 P.troglodytes:85

L0PCM3              	100.00%		H2QAT5              	100.00%
Bootstrap support for L0PCM3 as seed ortholog is 100%.
Bootstrap support for H2QAT5 as seed ortholog is 100%.

Group of orthologs #1264. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 P.troglodytes:7

L0P9F8              	100.00%		H2Q3I5              	100.00%
                    	       		H2QLU5              	51.71%
                    	       		H2QSU9              	26.36%
Bootstrap support for L0P9F8 as seed ortholog is 100%.
Bootstrap support for H2Q3I5 as seed ortholog is 59%.
Alternative seed ortholog is H2Q4D1 (7 bits away from this cluster)

Group of orthologs #1265. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:41 P.troglodytes:40

L0PFU9              	100.00%		H2QKP1              	100.00%
                    	       		H2QEA2              	20.86%
Bootstrap support for L0PFU9 as seed ortholog is 95%.
Bootstrap support for H2QKP1 as seed ortholog is 92%.

Group of orthologs #1266. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 P.troglodytes:84

L0PEX2              	100.00%		H2RBI1              	100.00%
                    	       		H2R0Y8              	34.32%
Bootstrap support for L0PEX2 as seed ortholog is 100%.
Bootstrap support for H2RBI1 as seed ortholog is 100%.

Group of orthologs #1267. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 P.troglodytes:84

L0PEI6              	100.00%		H2Q0I0              	100.00%
Bootstrap support for L0PEI6 as seed ortholog is 100%.
Bootstrap support for H2Q0I0 as seed ortholog is 100%.

Group of orthologs #1268. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 P.troglodytes:9

L0PA37              	100.00%		H2R8A9              	100.00%
Bootstrap support for L0PA37 as seed ortholog is 100%.
Bootstrap support for H2R8A9 as seed ortholog is 72%.
Alternative seed ortholog is H2QR90 (9 bits away from this cluster)

Group of orthologs #1269. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 P.troglodytes:84

L0PFQ3              	100.00%		H2R844              	100.00%
Bootstrap support for L0PFQ3 as seed ortholog is 100%.
Bootstrap support for H2R844 as seed ortholog is 100%.

Group of orthologs #1270. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 P.troglodytes:84

L0PG56              	100.00%		H2R813              	100.00%
Bootstrap support for L0PG56 as seed ortholog is 100%.
Bootstrap support for H2R813 as seed ortholog is 100%.

Group of orthologs #1271. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:84 P.troglodytes:84

L0PF93              	100.00%		H2RI43              	100.00%
Bootstrap support for L0PF93 as seed ortholog is 100%.
Bootstrap support for H2RI43 as seed ortholog is 100%.

Group of orthologs #1272. Best score 84 bits
Score difference with first non-orthologous sequence - P.jiroveci:27 P.troglodytes:25

L0PFT5              	100.00%		H2RI68              	100.00%
Bootstrap support for L0PFT5 as seed ortholog is 92%.
Bootstrap support for H2RI68 as seed ortholog is 94%.

Group of orthologs #1273. Best score 83 bits
Score difference with first non-orthologous sequence - P.jiroveci:83 P.troglodytes:83

L0PEH3              	100.00%		H2QA11              	100.00%
Bootstrap support for L0PEH3 as seed ortholog is 100%.
Bootstrap support for H2QA11 as seed ortholog is 100%.

Group of orthologs #1274. Best score 83 bits
Score difference with first non-orthologous sequence - P.jiroveci:83 P.troglodytes:83

L0PDE2              	100.00%		H2R1Y8              	100.00%
Bootstrap support for L0PDE2 as seed ortholog is 100%.
Bootstrap support for H2R1Y8 as seed ortholog is 100%.

Group of orthologs #1275. Best score 83 bits
Score difference with first non-orthologous sequence - P.jiroveci:83 P.troglodytes:8

L0PEL1              	100.00%		H2RD05              	100.00%
Bootstrap support for L0PEL1 as seed ortholog is 100%.
Bootstrap support for H2RD05 as seed ortholog is 53%.
Alternative seed ortholog is H2QUZ9 (8 bits away from this cluster)

Group of orthologs #1276. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 P.troglodytes:24

L0P8U3              	100.00%		H2Q5W8              	100.00%
                    	       		H2RCH7              	61.31%
Bootstrap support for L0P8U3 as seed ortholog is 100%.
Bootstrap support for H2Q5W8 as seed ortholog is 84%.

Group of orthologs #1277. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 P.troglodytes:82

L0PEV7              	100.00%		H2R3C2              	100.00%
                    	       		H2QBD8              	55.68%
Bootstrap support for L0PEV7 as seed ortholog is 100%.
Bootstrap support for H2R3C2 as seed ortholog is 100%.

Group of orthologs #1278. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 P.troglodytes:36

L0PAD6              	100.00%		H2RF18              	100.00%
                    	       		H2Q074              	37.34%
Bootstrap support for L0PAD6 as seed ortholog is 100%.
Bootstrap support for H2RF18 as seed ortholog is 87%.

Group of orthologs #1279. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 P.troglodytes:82

L0PB51              	100.00%		H2Q6F8              	100.00%
Bootstrap support for L0PB51 as seed ortholog is 100%.
Bootstrap support for H2Q6F8 as seed ortholog is 100%.

Group of orthologs #1280. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 P.troglodytes:82

L0PFF8              	100.00%		H2QI18              	100.00%
Bootstrap support for L0PFF8 as seed ortholog is 100%.
Bootstrap support for H2QI18 as seed ortholog is 100%.

Group of orthologs #1281. Best score 82 bits
Score difference with first non-orthologous sequence - P.jiroveci:82 P.troglodytes:82

L0PBP1              	100.00%		H2RI34              	100.00%
Bootstrap support for L0PBP1 as seed ortholog is 100%.
Bootstrap support for H2RI34 as seed ortholog is 100%.

Group of orthologs #1282. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 P.troglodytes:81

L0PDW2              	100.00%		H2Q892              	100.00%
                    	       		H2R454              	100.00%
Bootstrap support for L0PDW2 as seed ortholog is 100%.
Bootstrap support for H2Q892 as seed ortholog is 100%.
Bootstrap support for H2R454 as seed ortholog is 100%.

Group of orthologs #1283. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 P.troglodytes:81

L0P7T1              	100.00%		H2QR61              	100.00%
                    	       		H2QMZ1              	85.76%
Bootstrap support for L0P7T1 as seed ortholog is 100%.
Bootstrap support for H2QR61 as seed ortholog is 100%.

Group of orthologs #1284. Best score 81 bits
Score difference with first non-orthologous sequence - P.jiroveci:81 P.troglodytes:81

L0PF50              	100.00%		B0VYX1              	100.00%
Bootstrap support for L0PF50 as seed ortholog is 100%.
Bootstrap support for B0VYX1 as seed ortholog is 100%.

Group of orthologs #1285. Best score 80 bits
Score difference with first non-orthologous sequence - P.jiroveci:80 P.troglodytes:80

L0P724              	100.00%		H2Q327              	100.00%
Bootstrap support for L0P724 as seed ortholog is 100%.
Bootstrap support for H2Q327 as seed ortholog is 100%.

Group of orthologs #1286. Best score 80 bits
Score difference with first non-orthologous sequence - P.jiroveci:80 P.troglodytes:80

L0PED2              	100.00%		H2QSD5              	100.00%
Bootstrap support for L0PED2 as seed ortholog is 100%.
Bootstrap support for H2QSD5 as seed ortholog is 100%.

Group of orthologs #1287. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 P.troglodytes:26

L0PG69              	100.00%		H2RBH4              	100.00%
                    	       		H2RC31              	100.00%
                    	       		H2QLH3              	81.14%
                    	       		H2QLH2              	78.12%
                    	       		H2QAJ0              	14.32%
Bootstrap support for L0PG69 as seed ortholog is 100%.
Bootstrap support for H2RBH4 as seed ortholog is 79%.
Bootstrap support for H2RC31 as seed ortholog is 82%.

Group of orthologs #1288. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 P.troglodytes:79

L0PFB5              	100.00%		H2QQQ9              	100.00%
                    	       		H2Q9Q2              	15.58%
                    	       		H2QF09              	13.47%
                    	       		H2R172              	10.91%
Bootstrap support for L0PFB5 as seed ortholog is 100%.
Bootstrap support for H2QQQ9 as seed ortholog is 100%.

Group of orthologs #1289. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 P.troglodytes:79

L0PDB5              	100.00%		H2QK26              	100.00%
                    	       		H2RGP2              	44.23%
Bootstrap support for L0PDB5 as seed ortholog is 100%.
Bootstrap support for H2QK26 as seed ortholog is 100%.

Group of orthologs #1290. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 P.troglodytes:79

L0PEQ9              	100.00%		H2RC26              	100.00%
                    	       		H2Q8H8              	9.50%
Bootstrap support for L0PEQ9 as seed ortholog is 100%.
Bootstrap support for H2RC26 as seed ortholog is 100%.

Group of orthologs #1291. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 P.troglodytes:79

L0P9T3              	100.00%		H2QBC9              	100.00%
Bootstrap support for L0P9T3 as seed ortholog is 100%.
Bootstrap support for H2QBC9 as seed ortholog is 100%.

Group of orthologs #1292. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 P.troglodytes:79

L0PCX6              	100.00%		H2QHY6              	100.00%
Bootstrap support for L0PCX6 as seed ortholog is 100%.
Bootstrap support for H2QHY6 as seed ortholog is 100%.

Group of orthologs #1293. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 P.troglodytes:79

L0PGW3              	100.00%		H2QN02              	100.00%
Bootstrap support for L0PGW3 as seed ortholog is 100%.
Bootstrap support for H2QN02 as seed ortholog is 100%.

Group of orthologs #1294. Best score 79 bits
Score difference with first non-orthologous sequence - P.jiroveci:79 P.troglodytes:79

L0PAF5              	100.00%		H2R4Y0              	100.00%
Bootstrap support for L0PAF5 as seed ortholog is 100%.
Bootstrap support for H2R4Y0 as seed ortholog is 100%.

Group of orthologs #1295. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 P.troglodytes:78

L0PB40              	100.00%		H2QH50              	100.00%
                    	       		H2QBK1              	19.31%
                    	       		H2RD51              	11.55%
                    	       		H2RA44              	8.10%
Bootstrap support for L0PB40 as seed ortholog is 100%.
Bootstrap support for H2QH50 as seed ortholog is 100%.

Group of orthologs #1296. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 P.troglodytes:78

L0PI79              	100.00%		H2QC83              	100.00%
                    	       		H2RDR6              	28.64%
Bootstrap support for L0PI79 as seed ortholog is 100%.
Bootstrap support for H2QC83 as seed ortholog is 100%.

Group of orthologs #1297. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 P.troglodytes:78

L0P9X8              	100.00%		H2QKE1              	100.00%
                    	       		H2Q817              	12.98%
Bootstrap support for L0P9X8 as seed ortholog is 100%.
Bootstrap support for H2QKE1 as seed ortholog is 100%.

Group of orthologs #1298. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 P.troglodytes:78

L0PB53              	100.00%		H2R0M7              	100.00%
                    	       		H2Q2F5              	34.46%
Bootstrap support for L0PB53 as seed ortholog is 100%.
Bootstrap support for H2R0M7 as seed ortholog is 100%.

Group of orthologs #1299. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 P.troglodytes:78

L0PGX1              	100.00%		H2Q3U3              	100.00%
Bootstrap support for L0PGX1 as seed ortholog is 100%.
Bootstrap support for H2Q3U3 as seed ortholog is 100%.

Group of orthologs #1300. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 P.troglodytes:19

L0PDX9              	100.00%		H2Q9S1              	100.00%
Bootstrap support for L0PDX9 as seed ortholog is 100%.
Bootstrap support for H2Q9S1 as seed ortholog is 73%.
Alternative seed ortholog is H2R9Y5 (19 bits away from this cluster)

Group of orthologs #1301. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 P.troglodytes:78

L0PFH8              	100.00%		H2Q8N3              	100.00%
Bootstrap support for L0PFH8 as seed ortholog is 100%.
Bootstrap support for H2Q8N3 as seed ortholog is 100%.

Group of orthologs #1302. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 P.troglodytes:78

L0P883              	100.00%		H2QIP4              	100.00%
Bootstrap support for L0P883 as seed ortholog is 100%.
Bootstrap support for H2QIP4 as seed ortholog is 100%.

Group of orthologs #1303. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 P.troglodytes:78

L0PD90              	100.00%		H2QG58              	100.00%
Bootstrap support for L0PD90 as seed ortholog is 100%.
Bootstrap support for H2QG58 as seed ortholog is 100%.

Group of orthologs #1304. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 P.troglodytes:78

L0PDS8              	100.00%		H2QWN0              	100.00%
Bootstrap support for L0PDS8 as seed ortholog is 100%.
Bootstrap support for H2QWN0 as seed ortholog is 100%.

Group of orthologs #1305. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 P.troglodytes:78

L0PFR5              	100.00%		H2QWM7              	100.00%
Bootstrap support for L0PFR5 as seed ortholog is 100%.
Bootstrap support for H2QWM7 as seed ortholog is 100%.

Group of orthologs #1306. Best score 78 bits
Score difference with first non-orthologous sequence - P.jiroveci:78 P.troglodytes:78

L0PDG4              	100.00%		H2RBS0              	100.00%
Bootstrap support for L0PDG4 as seed ortholog is 100%.
Bootstrap support for H2RBS0 as seed ortholog is 100%.

Group of orthologs #1307. Best score 77 bits
Score difference with first non-orthologous sequence - P.jiroveci:77 P.troglodytes:77

L0PBK6              	100.00%		B1NLA3              	100.00%
                    	       		B1NL93              	79.03%
                    	       		A4ZZ70              	76.31%
                    	       		A4ZZ69              	74.76%
                    	       		H2QVH3              	24.66%
                    	       		H2PYZ3              	12.62%
                    	       		H2R3R0              	10.29%
                    	       		H2RCA4              	8.93%
                    	       		H2Q2B0              	8.16%
                    	       		H2Q2B2              	7.96%
                    	       		H2QIN6              	6.60%
                    	       		H2QGD7              	5.83%
Bootstrap support for L0PBK6 as seed ortholog is 100%.
Bootstrap support for B1NLA3 as seed ortholog is 100%.

Group of orthologs #1308. Best score 77 bits
Score difference with first non-orthologous sequence - P.jiroveci:18 P.troglodytes:77

L0PIV0              	100.00%		G2HEE7              	100.00%
Bootstrap support for L0PIV0 as seed ortholog is 76%.
Bootstrap support for G2HEE7 as seed ortholog is 100%.

Group of orthologs #1309. Best score 77 bits
Score difference with first non-orthologous sequence - P.jiroveci:77 P.troglodytes:77

L0P988              	100.00%		H2R581              	100.00%
Bootstrap support for L0P988 as seed ortholog is 100%.
Bootstrap support for H2R581 as seed ortholog is 100%.

Group of orthologs #1310. Best score 76 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 P.troglodytes:76

L0P7Y1              	100.00%		H2PYD5              	100.00%
Bootstrap support for L0P7Y1 as seed ortholog is 100%.
Bootstrap support for H2PYD5 as seed ortholog is 100%.

Group of orthologs #1311. Best score 76 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 P.troglodytes:76

L0PE73              	100.00%		H2Q726              	100.00%
Bootstrap support for L0PE73 as seed ortholog is 100%.
Bootstrap support for H2Q726 as seed ortholog is 100%.

Group of orthologs #1312. Best score 76 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 P.troglodytes:76

L0PD91              	100.00%		H2QJ71              	100.00%
Bootstrap support for L0PD91 as seed ortholog is 100%.
Bootstrap support for H2QJ71 as seed ortholog is 100%.

Group of orthologs #1313. Best score 76 bits
Score difference with first non-orthologous sequence - P.jiroveci:76 P.troglodytes:76

L0PAS9              	100.00%		Q0MQC3              	100.00%
Bootstrap support for L0PAS9 as seed ortholog is 100%.
Bootstrap support for Q0MQC3 as seed ortholog is 100%.

Group of orthologs #1314. Best score 75 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 P.troglodytes:75

L0PAD3              	100.00%		H2R2K8              	100.00%
                    	       		H2PZZ4              	32.98%
                    	       		H2RBX2              	29.93%
                    	       		H2QEG4              	27.40%
                    	       		H2QEY4              	26.98%
                    	       		H2QF77              	7.48%
                    	       		H2QX32              	7.27%
                    	       		H2PZ03              	6.74%
                    	       		H2QFE1              	5.90%
Bootstrap support for L0PAD3 as seed ortholog is 100%.
Bootstrap support for H2R2K8 as seed ortholog is 100%.

Group of orthologs #1315. Best score 75 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 P.troglodytes:75

L0PDF0              	100.00%		H2QRC6              	100.00%
                    	       		H2Q9X3              	55.84%
                    	       		H2PZE8              	8.31%
                    	       		H2QFC5              	8.31%
Bootstrap support for L0PDF0 as seed ortholog is 100%.
Bootstrap support for H2QRC6 as seed ortholog is 100%.

Group of orthologs #1316. Best score 75 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 P.troglodytes:75

L0PF67              	100.00%		H2QIX5              	100.00%
Bootstrap support for L0PF67 as seed ortholog is 100%.
Bootstrap support for H2QIX5 as seed ortholog is 100%.

Group of orthologs #1317. Best score 75 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 P.troglodytes:75

L0PAV0              	100.00%		H2QV53              	100.00%
Bootstrap support for L0PAV0 as seed ortholog is 100%.
Bootstrap support for H2QV53 as seed ortholog is 100%.

Group of orthologs #1318. Best score 75 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 P.troglodytes:75

L0PEG8              	100.00%		H2QV54              	100.00%
Bootstrap support for L0PEG8 as seed ortholog is 100%.
Bootstrap support for H2QV54 as seed ortholog is 100%.

Group of orthologs #1319. Best score 75 bits
Score difference with first non-orthologous sequence - P.jiroveci:75 P.troglodytes:75

L0P813              	100.00%		H2R445              	100.00%
Bootstrap support for L0P813 as seed ortholog is 100%.
Bootstrap support for H2R445 as seed ortholog is 100%.

Group of orthologs #1320. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 P.troglodytes:74

L0PB39              	100.00%		H2Q3Z8              	100.00%
                    	       		H2RFC7              	88.76%
Bootstrap support for L0PB39 as seed ortholog is 100%.
Bootstrap support for H2Q3Z8 as seed ortholog is 100%.

Group of orthologs #1321. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 P.troglodytes:74

L0PCJ4              	100.00%		H2QG35              	100.00%
                    	       		H2R5U2              	22.22%
Bootstrap support for L0PCJ4 as seed ortholog is 100%.
Bootstrap support for H2QG35 as seed ortholog is 100%.

Group of orthologs #1322. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 P.troglodytes:74

L0PAX2              	100.00%		H2QYC8              	100.00%
                    	       		H2QTU1              	25.42%
Bootstrap support for L0PAX2 as seed ortholog is 100%.
Bootstrap support for H2QYC8 as seed ortholog is 100%.

Group of orthologs #1323. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 P.troglodytes:74

L0P745              	100.00%		H2Q1T6              	100.00%
Bootstrap support for L0P745 as seed ortholog is 100%.
Bootstrap support for H2Q1T6 as seed ortholog is 100%.

Group of orthologs #1324. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 P.troglodytes:74

L0PCB6              	100.00%		G2HFY1              	100.00%
Bootstrap support for L0PCB6 as seed ortholog is 100%.
Bootstrap support for G2HFY1 as seed ortholog is 100%.

Group of orthologs #1325. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 P.troglodytes:74

L0PBR0              	100.00%		H2QK44              	100.00%
Bootstrap support for L0PBR0 as seed ortholog is 100%.
Bootstrap support for H2QK44 as seed ortholog is 100%.

Group of orthologs #1326. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 P.troglodytes:74

L0PFN7              	100.00%		H2QGV5              	100.00%
Bootstrap support for L0PFN7 as seed ortholog is 100%.
Bootstrap support for H2QGV5 as seed ortholog is 100%.

Group of orthologs #1327. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 P.troglodytes:74

L0P7K1              	100.00%		H2QQG6              	100.00%
Bootstrap support for L0P7K1 as seed ortholog is 100%.
Bootstrap support for H2QQG6 as seed ortholog is 100%.

Group of orthologs #1328. Best score 74 bits
Score difference with first non-orthologous sequence - P.jiroveci:74 P.troglodytes:74

L0PE66              	100.00%		H2QKL5              	100.00%
Bootstrap support for L0PE66 as seed ortholog is 100%.
Bootstrap support for H2QKL5 as seed ortholog is 100%.

Group of orthologs #1329. Best score 73 bits
Score difference with first non-orthologous sequence - P.jiroveci:73 P.troglodytes:73

L0P831              	100.00%		H2QCL4              	100.00%
L0PDC1              	41.95%		
Bootstrap support for L0P831 as seed ortholog is 100%.
Bootstrap support for H2QCL4 as seed ortholog is 100%.

Group of orthologs #1330. Best score 73 bits
Score difference with first non-orthologous sequence - P.jiroveci:73 P.troglodytes:73

L0PAK5              	100.00%		H2Q2P5              	100.00%
Bootstrap support for L0PAK5 as seed ortholog is 100%.
Bootstrap support for H2Q2P5 as seed ortholog is 100%.

Group of orthologs #1331. Best score 73 bits
Score difference with first non-orthologous sequence - P.jiroveci:73 P.troglodytes:73

L0PG35              	100.00%		H2QST1              	100.00%
Bootstrap support for L0PG35 as seed ortholog is 100%.
Bootstrap support for H2QST1 as seed ortholog is 100%.

Group of orthologs #1332. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 P.troglodytes:72

L0P9V0              	100.00%		H2Q139              	100.00%
Bootstrap support for L0P9V0 as seed ortholog is 100%.
Bootstrap support for H2Q139 as seed ortholog is 100%.

Group of orthologs #1333. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 P.troglodytes:72

L0PEQ6              	100.00%		H2Q4E3              	100.00%
Bootstrap support for L0PEQ6 as seed ortholog is 100%.
Bootstrap support for H2Q4E3 as seed ortholog is 100%.

Group of orthologs #1334. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 P.troglodytes:72

L0PA21              	100.00%		H2QDE8              	100.00%
Bootstrap support for L0PA21 as seed ortholog is 100%.
Bootstrap support for H2QDE8 as seed ortholog is 100%.

Group of orthologs #1335. Best score 72 bits
Score difference with first non-orthologous sequence - P.jiroveci:72 P.troglodytes:72

L0PA11              	100.00%		H2QUN3              	100.00%
Bootstrap support for L0PA11 as seed ortholog is 100%.
Bootstrap support for H2QUN3 as seed ortholog is 100%.

Group of orthologs #1336. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 P.troglodytes:71

L0PDY7              	100.00%		H2QRS0              	100.00%
                    	       		H2QPZ7              	17.47%
Bootstrap support for L0PDY7 as seed ortholog is 100%.
Bootstrap support for H2QRS0 as seed ortholog is 100%.

Group of orthologs #1337. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 P.troglodytes:71

L0P954              	100.00%		H2PZF9              	100.00%
Bootstrap support for L0P954 as seed ortholog is 100%.
Bootstrap support for H2PZF9 as seed ortholog is 100%.

Group of orthologs #1338. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 P.troglodytes:71

L0P9M2              	100.00%		H2QGM1              	100.00%
Bootstrap support for L0P9M2 as seed ortholog is 100%.
Bootstrap support for H2QGM1 as seed ortholog is 100%.

Group of orthologs #1339. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 P.troglodytes:71

L0PG11              	100.00%		H2QA39              	100.00%
Bootstrap support for L0PG11 as seed ortholog is 100%.
Bootstrap support for H2QA39 as seed ortholog is 100%.

Group of orthologs #1340. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 P.troglodytes:71

L0PE38              	100.00%		H2QHV5              	100.00%
Bootstrap support for L0PE38 as seed ortholog is 100%.
Bootstrap support for H2QHV5 as seed ortholog is 100%.

Group of orthologs #1341. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 P.troglodytes:71

L0PFF1              	100.00%		H2QRW1              	100.00%
Bootstrap support for L0PFF1 as seed ortholog is 100%.
Bootstrap support for H2QRW1 as seed ortholog is 100%.

Group of orthologs #1342. Best score 71 bits
Score difference with first non-orthologous sequence - P.jiroveci:71 P.troglodytes:71

L0PDC5              	100.00%		H2QYJ4              	100.00%
Bootstrap support for L0PDC5 as seed ortholog is 100%.
Bootstrap support for H2QYJ4 as seed ortholog is 100%.

Group of orthologs #1343. Best score 70 bits
Score difference with first non-orthologous sequence - P.jiroveci:70 P.troglodytes:70

L0PAF1              	100.00%		H2Q2R3              	100.00%
Bootstrap support for L0PAF1 as seed ortholog is 100%.
Bootstrap support for H2Q2R3 as seed ortholog is 100%.

Group of orthologs #1344. Best score 70 bits
Score difference with first non-orthologous sequence - P.jiroveci:70 P.troglodytes:70

L0P9X6              	100.00%		H2QFY9              	100.00%
Bootstrap support for L0P9X6 as seed ortholog is 100%.
Bootstrap support for H2QFY9 as seed ortholog is 100%.

Group of orthologs #1345. Best score 70 bits
Score difference with first non-orthologous sequence - P.jiroveci:70 P.troglodytes:70

L0PAE3              	100.00%		H2R3G1              	100.00%
Bootstrap support for L0PAE3 as seed ortholog is 100%.
Bootstrap support for H2R3G1 as seed ortholog is 100%.

Group of orthologs #1346. Best score 69 bits
Score difference with first non-orthologous sequence - P.jiroveci:69 P.troglodytes:69

L0PAT1              	100.00%		H2PYP8              	100.00%
Bootstrap support for L0PAT1 as seed ortholog is 100%.
Bootstrap support for H2PYP8 as seed ortholog is 100%.

Group of orthologs #1347. Best score 69 bits
Score difference with first non-orthologous sequence - P.jiroveci:69 P.troglodytes:69

L0PDW6              	100.00%		H2Q8J5              	100.00%
Bootstrap support for L0PDW6 as seed ortholog is 100%.
Bootstrap support for H2Q8J5 as seed ortholog is 100%.

Group of orthologs #1348. Best score 69 bits
Score difference with first non-orthologous sequence - P.jiroveci:69 P.troglodytes:69

L0PDZ0              	100.00%		H2QBI8              	100.00%
Bootstrap support for L0PDZ0 as seed ortholog is 100%.
Bootstrap support for H2QBI8 as seed ortholog is 100%.

Group of orthologs #1349. Best score 69 bits
Score difference with first non-orthologous sequence - P.jiroveci:69 P.troglodytes:69

L0PDR4              	100.00%		H2QCD7              	100.00%
Bootstrap support for L0PDR4 as seed ortholog is 100%.
Bootstrap support for H2QCD7 as seed ortholog is 100%.

Group of orthologs #1350. Best score 68 bits
Score difference with first non-orthologous sequence - P.jiroveci:68 P.troglodytes:68

L0PBA0              	100.00%		H2QYR0              	100.00%
Bootstrap support for L0PBA0 as seed ortholog is 100%.
Bootstrap support for H2QYR0 as seed ortholog is 100%.

Group of orthologs #1351. Best score 68 bits
Score difference with first non-orthologous sequence - P.jiroveci:68 P.troglodytes:68

L0PCZ0              	100.00%		H2QZC1              	100.00%
Bootstrap support for L0PCZ0 as seed ortholog is 100%.
Bootstrap support for H2QZC1 as seed ortholog is 100%.

Group of orthologs #1352. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 P.troglodytes:13

L0P8G6              	100.00%		H2Q811              	100.00%
                    	       		H2R3L5              	47.48%
                    	       		H2R9E8              	36.93%
                    	       		H2R656              	5.28%
Bootstrap support for L0P8G6 as seed ortholog is 100%.
Bootstrap support for H2Q811 as seed ortholog is 71%.
Alternative seed ortholog is H2QGS8 (13 bits away from this cluster)

Group of orthologs #1353. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 P.troglodytes:67

L0PEH0              	100.00%		H2PZ37              	100.00%
Bootstrap support for L0PEH0 as seed ortholog is 100%.
Bootstrap support for H2PZ37 as seed ortholog is 100%.

Group of orthologs #1354. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 P.troglodytes:21

L0P881              	100.00%		H2QAW9              	100.00%
Bootstrap support for L0P881 as seed ortholog is 100%.
Bootstrap support for H2QAW9 as seed ortholog is 90%.

Group of orthologs #1355. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 P.troglodytes:67

L0P937              	100.00%		H2QQL9              	100.00%
Bootstrap support for L0P937 as seed ortholog is 100%.
Bootstrap support for H2QQL9 as seed ortholog is 100%.

Group of orthologs #1356. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 P.troglodytes:67

L0PC72              	100.00%		H2QS89              	100.00%
Bootstrap support for L0PC72 as seed ortholog is 100%.
Bootstrap support for H2QS89 as seed ortholog is 100%.

Group of orthologs #1357. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 P.troglodytes:67

L0PAE2              	100.00%		H2QZS9              	100.00%
Bootstrap support for L0PAE2 as seed ortholog is 100%.
Bootstrap support for H2QZS9 as seed ortholog is 100%.

Group of orthologs #1358. Best score 67 bits
Score difference with first non-orthologous sequence - P.jiroveci:67 P.troglodytes:67

L0PGG4              	100.00%		H2QV98              	100.00%
Bootstrap support for L0PGG4 as seed ortholog is 100%.
Bootstrap support for H2QV98 as seed ortholog is 100%.

Group of orthologs #1359. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 P.troglodytes:66

L0PFT1              	100.00%		H2R7D1              	100.00%
                    	       		H2QHS3              	34.53%
                    	       		H2R9C4              	11.15%
                    	       		Q5R1W5              	10.79%
                    	       		H2QTE1              	10.43%
Bootstrap support for L0PFT1 as seed ortholog is 100%.
Bootstrap support for H2R7D1 as seed ortholog is 100%.

Group of orthologs #1360. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 P.troglodytes:66

L0PFS6              	100.00%		H2QWG2              	100.00%
                    	       		H2QFY5              	50.78%
Bootstrap support for L0PFS6 as seed ortholog is 100%.
Bootstrap support for H2QWG2 as seed ortholog is 100%.

Group of orthologs #1361. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 P.troglodytes:66

L0PE07              	100.00%		H2QDU9              	100.00%
Bootstrap support for L0PE07 as seed ortholog is 100%.
Bootstrap support for H2QDU9 as seed ortholog is 100%.

Group of orthologs #1362. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 P.troglodytes:66

L0PEU8              	100.00%		H2QEF8              	100.00%
Bootstrap support for L0PEU8 as seed ortholog is 100%.
Bootstrap support for H2QEF8 as seed ortholog is 100%.

Group of orthologs #1363. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 P.troglodytes:66

L0PBY4              	100.00%		H2QQK0              	100.00%
Bootstrap support for L0PBY4 as seed ortholog is 100%.
Bootstrap support for H2QQK0 as seed ortholog is 100%.

Group of orthologs #1364. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 P.troglodytes:66

L0PAG5              	100.00%		H2QWL0              	100.00%
Bootstrap support for L0PAG5 as seed ortholog is 100%.
Bootstrap support for H2QWL0 as seed ortholog is 100%.

Group of orthologs #1365. Best score 66 bits
Score difference with first non-orthologous sequence - P.jiroveci:66 P.troglodytes:66

L0PDH5              	100.00%		H2QWP9              	100.00%
Bootstrap support for L0PDH5 as seed ortholog is 100%.
Bootstrap support for H2QWP9 as seed ortholog is 100%.

Group of orthologs #1366. Best score 65 bits
Score difference with first non-orthologous sequence - P.jiroveci:65 P.troglodytes:65

L0PFT6              	100.00%		H2QZJ1              	100.00%
L0P6V3              	44.67%		
Bootstrap support for L0PFT6 as seed ortholog is 100%.
Bootstrap support for H2QZJ1 as seed ortholog is 100%.

Group of orthologs #1367. Best score 65 bits
Score difference with first non-orthologous sequence - P.jiroveci:65 P.troglodytes:65

L0PB93              	100.00%		H2Q1C6              	100.00%
Bootstrap support for L0PB93 as seed ortholog is 100%.
Bootstrap support for H2Q1C6 as seed ortholog is 100%.

Group of orthologs #1368. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 P.troglodytes:64

L0P9R4              	100.00%		H2QI50              	100.00%
Bootstrap support for L0P9R4 as seed ortholog is 100%.
Bootstrap support for H2QI50 as seed ortholog is 100%.

Group of orthologs #1369. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 P.troglodytes:64

L0PE59              	100.00%		H2QNE7              	100.00%
Bootstrap support for L0PE59 as seed ortholog is 100%.
Bootstrap support for H2QNE7 as seed ortholog is 100%.

Group of orthologs #1370. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 P.troglodytes:64

L0PFE2              	100.00%		H2QX85              	100.00%
Bootstrap support for L0PFE2 as seed ortholog is 100%.
Bootstrap support for H2QX85 as seed ortholog is 100%.

Group of orthologs #1371. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 P.troglodytes:64

L0PDN3              	100.00%		H2QZQ7              	100.00%
Bootstrap support for L0PDN3 as seed ortholog is 100%.
Bootstrap support for H2QZQ7 as seed ortholog is 100%.

Group of orthologs #1372. Best score 64 bits
Score difference with first non-orthologous sequence - P.jiroveci:64 P.troglodytes:64

L0P9C0              	100.00%		H2R4J8              	100.00%
Bootstrap support for L0P9C0 as seed ortholog is 100%.
Bootstrap support for H2R4J8 as seed ortholog is 100%.

Group of orthologs #1373. Best score 63 bits
Score difference with first non-orthologous sequence - P.jiroveci:63 P.troglodytes:63

L0PAZ6              	100.00%		H2QT33              	100.00%
                    	       		H2Q181              	52.04%
                    	       		H2Q8P2              	34.75%
Bootstrap support for L0PAZ6 as seed ortholog is 100%.
Bootstrap support for H2QT33 as seed ortholog is 100%.

Group of orthologs #1374. Best score 63 bits
Score difference with first non-orthologous sequence - P.jiroveci:63 P.troglodytes:63

L0P929              	100.00%		H2QHJ7              	100.00%
                    	       		H2QHJ8              	60.95%
Bootstrap support for L0P929 as seed ortholog is 100%.
Bootstrap support for H2QHJ7 as seed ortholog is 100%.

Group of orthologs #1375. Best score 63 bits
Score difference with first non-orthologous sequence - P.jiroveci:63 P.troglodytes:63

L0PGS0              	100.00%		H2QFC6              	100.00%
                    	       		H2PZ27              	39.79%
Bootstrap support for L0PGS0 as seed ortholog is 100%.
Bootstrap support for H2QFC6 as seed ortholog is 100%.

Group of orthologs #1376. Best score 63 bits
Score difference with first non-orthologous sequence - P.jiroveci:63 P.troglodytes:63

L0PC69              	100.00%		H2QN62              	100.00%
Bootstrap support for L0PC69 as seed ortholog is 100%.
Bootstrap support for H2QN62 as seed ortholog is 100%.

Group of orthologs #1377. Best score 62 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 P.troglodytes:62

L0PAY8              	100.00%		H2Q224              	100.00%
Bootstrap support for L0PAY8 as seed ortholog is 100%.
Bootstrap support for H2Q224 as seed ortholog is 100%.

Group of orthologs #1378. Best score 62 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 P.troglodytes:62

L0PBS8              	100.00%		H2Q3P1              	100.00%
Bootstrap support for L0PBS8 as seed ortholog is 100%.
Bootstrap support for H2Q3P1 as seed ortholog is 100%.

Group of orthologs #1379. Best score 62 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 P.troglodytes:62

L0PAI3              	100.00%		H2Q710              	100.00%
Bootstrap support for L0PAI3 as seed ortholog is 100%.
Bootstrap support for H2Q710 as seed ortholog is 100%.

Group of orthologs #1380. Best score 62 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 P.troglodytes:62

L0PG83              	100.00%		H2Q1W6              	100.00%
Bootstrap support for L0PG83 as seed ortholog is 100%.
Bootstrap support for H2Q1W6 as seed ortholog is 100%.

Group of orthologs #1381. Best score 62 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 P.troglodytes:62

L0PGK4              	100.00%		H2Q6Q7              	100.00%
Bootstrap support for L0PGK4 as seed ortholog is 100%.
Bootstrap support for H2Q6Q7 as seed ortholog is 100%.

Group of orthologs #1382. Best score 62 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 P.troglodytes:62

L0PAP8              	100.00%		H2QD98              	100.00%
Bootstrap support for L0PAP8 as seed ortholog is 100%.
Bootstrap support for H2QD98 as seed ortholog is 100%.

Group of orthologs #1383. Best score 62 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 P.troglodytes:62

L0PH05              	100.00%		H2QIH2              	100.00%
Bootstrap support for L0PH05 as seed ortholog is 100%.
Bootstrap support for H2QIH2 as seed ortholog is 100%.

Group of orthologs #1384. Best score 62 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 P.troglodytes:62

L0PBP5              	100.00%		H2QPI0              	100.00%
Bootstrap support for L0PBP5 as seed ortholog is 100%.
Bootstrap support for H2QPI0 as seed ortholog is 100%.

Group of orthologs #1385. Best score 62 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 P.troglodytes:62

L0PEY1              	100.00%		H2QN43              	100.00%
Bootstrap support for L0PEY1 as seed ortholog is 100%.
Bootstrap support for H2QN43 as seed ortholog is 100%.

Group of orthologs #1386. Best score 62 bits
Score difference with first non-orthologous sequence - P.jiroveci:62 P.troglodytes:62

L0PE16              	100.00%		H2QR48              	100.00%
Bootstrap support for L0PE16 as seed ortholog is 100%.
Bootstrap support for H2QR48 as seed ortholog is 100%.

Group of orthologs #1387. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 P.troglodytes:61

L0PA64              	100.00%		H2PYL6              	100.00%
                    	       		H2R2P2              	36.04%
                    	       		H2QHB7              	13.32%
                    	       		H2QG61              	11.93%
                    	       		H2QAX5              	10.53%
                    	       		H2R322              	10.41%
                    	       		H2QWU8              	10.03%
                    	       		H2QS63              	9.77%
                    	       		H2RD43              	9.77%
                    	       		H2PYU1              	8.50%
                    	       		H2QH89              	8.38%
                    	       		H2QEQ8              	8.12%
                    	       		H2Q673              	6.35%
                    	       		H2QAV5              	5.84%
                    	       		H2Q7Y6              	5.33%
                    	       		H2PZ25              	5.08%
Bootstrap support for L0PA64 as seed ortholog is 100%.
Bootstrap support for H2PYL6 as seed ortholog is 100%.

Group of orthologs #1388. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 P.troglodytes:61

L0P7Y0              	100.00%		H2Q5V7              	100.00%
                    	       		H2RB20              	69.48%
                    	       		H2QD88              	52.61%
                    	       		H2R1Y0              	15.24%
                    	       		H2R267              	14.31%
                    	       		H2R1G5              	11.45%
                    	       		H2Q7M3              	11.20%
Bootstrap support for L0P7Y0 as seed ortholog is 100%.
Bootstrap support for H2Q5V7 as seed ortholog is 100%.

Group of orthologs #1389. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 P.troglodytes:61

L0PEN9              	100.00%		H2RHS9              	100.00%
                    	       		H2Q3R3              	20.04%
Bootstrap support for L0PEN9 as seed ortholog is 100%.
Bootstrap support for H2RHS9 as seed ortholog is 100%.

Group of orthologs #1390. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 P.troglodytes:61

L0PCN6              	100.00%		H2Q233              	100.00%
Bootstrap support for L0PCN6 as seed ortholog is 100%.
Bootstrap support for H2Q233 as seed ortholog is 100%.

Group of orthologs #1391. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 P.troglodytes:4

L0P8Q3              	100.00%		H2QID6              	100.00%
Bootstrap support for L0P8Q3 as seed ortholog is 100%.
Bootstrap support for H2QID6 as seed ortholog is 56%.
Alternative seed ortholog is H2QEB2 (4 bits away from this cluster)

Group of orthologs #1392. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 P.troglodytes:61

L0PFH5              	100.00%		H2QE96              	100.00%
Bootstrap support for L0PFH5 as seed ortholog is 100%.
Bootstrap support for H2QE96 as seed ortholog is 100%.

Group of orthologs #1393. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 P.troglodytes:61

L0PEC4              	100.00%		H2QSM1              	100.00%
Bootstrap support for L0PEC4 as seed ortholog is 100%.
Bootstrap support for H2QSM1 as seed ortholog is 100%.

Group of orthologs #1394. Best score 61 bits
Score difference with first non-orthologous sequence - P.jiroveci:61 P.troglodytes:61

L0PFE5              	100.00%		H2REF5              	100.00%
Bootstrap support for L0PFE5 as seed ortholog is 100%.
Bootstrap support for H2REF5 as seed ortholog is 100%.

Group of orthologs #1395. Best score 60 bits
Score difference with first non-orthologous sequence - P.jiroveci:60 P.troglodytes:60

L0P7U7              	100.00%		H2QIE1              	100.00%
Bootstrap support for L0P7U7 as seed ortholog is 100%.
Bootstrap support for H2QIE1 as seed ortholog is 100%.

Group of orthologs #1396. Best score 60 bits
Score difference with first non-orthologous sequence - P.jiroveci:60 P.troglodytes:60

L0P7Q6              	100.00%		H2RB90              	100.00%
Bootstrap support for L0P7Q6 as seed ortholog is 100%.
Bootstrap support for H2RB90 as seed ortholog is 100%.

Group of orthologs #1397. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 P.troglodytes:59

L0PEB6              	100.00%		H2Q9V6              	100.00%
                    	       		H2R6H0              	19.49%
Bootstrap support for L0PEB6 as seed ortholog is 100%.
Bootstrap support for H2Q9V6 as seed ortholog is 100%.

Group of orthologs #1398. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 P.troglodytes:59

L0PF40              	100.00%		H2QDE9              	100.00%
                    	       		H2QAA8              	8.65%
Bootstrap support for L0PF40 as seed ortholog is 100%.
Bootstrap support for H2QDE9 as seed ortholog is 100%.

Group of orthologs #1399. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 P.troglodytes:59

L0P9H6              	100.00%		H2PZV6              	100.00%
Bootstrap support for L0P9H6 as seed ortholog is 100%.
Bootstrap support for H2PZV6 as seed ortholog is 100%.

Group of orthologs #1400. Best score 59 bits
Score difference with first non-orthologous sequence - P.jiroveci:59 P.troglodytes:59

L0PBW6              	100.00%		H2QVU9              	100.00%
Bootstrap support for L0PBW6 as seed ortholog is 100%.
Bootstrap support for H2QVU9 as seed ortholog is 100%.

Group of orthologs #1401. Best score 58 bits
Score difference with first non-orthologous sequence - P.jiroveci:58 P.troglodytes:58

L0PB91              	100.00%		H2QXR5              	100.00%
                    	       		Q1XHY9              	55.23%
                    	       		Q862Z6              	55.23%
                    	       		H2Q0U8              	38.95%
Bootstrap support for L0PB91 as seed ortholog is 100%.
Bootstrap support for H2QXR5 as seed ortholog is 100%.

Group of orthologs #1402. Best score 57 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 P.troglodytes:57

L0P9B7              	100.00%		H2QHI9              	100.00%
Bootstrap support for L0P9B7 as seed ortholog is 100%.
Bootstrap support for H2QHI9 as seed ortholog is 100%.

Group of orthologs #1403. Best score 57 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 P.troglodytes:57

L0PHJ4              	100.00%		H2QJ09              	100.00%
Bootstrap support for L0PHJ4 as seed ortholog is 100%.
Bootstrap support for H2QJ09 as seed ortholog is 100%.

Group of orthologs #1404. Best score 57 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 P.troglodytes:57

L0P9J8              	100.00%		H2RCJ0              	100.00%
Bootstrap support for L0P9J8 as seed ortholog is 100%.
Bootstrap support for H2RCJ0 as seed ortholog is 100%.

Group of orthologs #1405. Best score 57 bits
Score difference with first non-orthologous sequence - P.jiroveci:57 P.troglodytes:57

L0P9U7              	100.00%		H2RES3              	100.00%
Bootstrap support for L0P9U7 as seed ortholog is 100%.
Bootstrap support for H2RES3 as seed ortholog is 100%.

Group of orthologs #1406. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 P.troglodytes:56

L0PC15              	100.00%		H2R4G6              	100.00%
                    	       		H2QWA8              	37.79%
                    	       		H2R338              	32.44%
                    	       		H2QPU8              	31.37%
                    	       		H2PY21              	24.06%
                    	       		H2QCG0              	6.24%
Bootstrap support for L0PC15 as seed ortholog is 100%.
Bootstrap support for H2R4G6 as seed ortholog is 100%.

Group of orthologs #1407. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 P.troglodytes:56

L0PC31              	100.00%		H2QFS8              	100.00%
L0PGG5              	100.00%		
Bootstrap support for L0PC31 as seed ortholog is 100%.
Bootstrap support for L0PGG5 as seed ortholog is 100%.
Bootstrap support for H2QFS8 as seed ortholog is 100%.

Group of orthologs #1408. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 P.troglodytes:56

L0PEB3              	100.00%		H2RCN0              	100.00%
                    	       		H2R313              	58.74%
Bootstrap support for L0PEB3 as seed ortholog is 100%.
Bootstrap support for H2RCN0 as seed ortholog is 100%.

Group of orthologs #1409. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 P.troglodytes:56

L0P8K9              	100.00%		H2PY72              	100.00%
Bootstrap support for L0P8K9 as seed ortholog is 100%.
Bootstrap support for H2PY72 as seed ortholog is 100%.

Group of orthologs #1410. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 P.troglodytes:56

L0PF02              	100.00%		H2QH64              	100.00%
Bootstrap support for L0PF02 as seed ortholog is 100%.
Bootstrap support for H2QH64 as seed ortholog is 100%.

Group of orthologs #1411. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 P.troglodytes:56

L0PGC3              	100.00%		H2QRM0              	100.00%
Bootstrap support for L0PGC3 as seed ortholog is 100%.
Bootstrap support for H2QRM0 as seed ortholog is 100%.

Group of orthologs #1412. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 P.troglodytes:56

L0PBG4              	100.00%		H2R301              	100.00%
Bootstrap support for L0PBG4 as seed ortholog is 100%.
Bootstrap support for H2R301 as seed ortholog is 100%.

Group of orthologs #1413. Best score 56 bits
Score difference with first non-orthologous sequence - P.jiroveci:56 P.troglodytes:56

L0PGU4              	100.00%		H2R0L7              	100.00%
Bootstrap support for L0PGU4 as seed ortholog is 100%.
Bootstrap support for H2R0L7 as seed ortholog is 100%.

Group of orthologs #1414. Best score 55 bits
Score difference with first non-orthologous sequence - P.jiroveci:55 P.troglodytes:55

L0PAD5              	100.00%		H2QMH7              	100.00%
Bootstrap support for L0PAD5 as seed ortholog is 100%.
Bootstrap support for H2QMH7 as seed ortholog is 100%.

Group of orthologs #1415. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 P.troglodytes:54

L0PBB5              	100.00%		H2QM67              	100.00%
                    	       		H2QQF6              	78.80%
                    	       		H2QZ81              	65.97%
                    	       		Q9N1Q7              	58.38%
                    	       		H2RHH9              	55.50%
Bootstrap support for L0PBB5 as seed ortholog is 100%.
Bootstrap support for H2QM67 as seed ortholog is 100%.

Group of orthologs #1416. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 P.troglodytes:54

L0P882              	100.00%		H2Q4L3              	100.00%
Bootstrap support for L0P882 as seed ortholog is 100%.
Bootstrap support for H2Q4L3 as seed ortholog is 100%.

Group of orthologs #1417. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 P.troglodytes:54

L0PE40              	100.00%		H2QAX1              	100.00%
Bootstrap support for L0PE40 as seed ortholog is 100%.
Bootstrap support for H2QAX1 as seed ortholog is 100%.

Group of orthologs #1418. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 P.troglodytes:54

L0PDQ8              	100.00%		H2QEX2              	100.00%
Bootstrap support for L0PDQ8 as seed ortholog is 100%.
Bootstrap support for H2QEX2 as seed ortholog is 100%.

Group of orthologs #1419. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 P.troglodytes:54

L0P7J7              	100.00%		H2QP06              	100.00%
Bootstrap support for L0P7J7 as seed ortholog is 100%.
Bootstrap support for H2QP06 as seed ortholog is 100%.

Group of orthologs #1420. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 P.troglodytes:54

L0PFA1              	100.00%		H2QQ91              	100.00%
Bootstrap support for L0PFA1 as seed ortholog is 100%.
Bootstrap support for H2QQ91 as seed ortholog is 100%.

Group of orthologs #1421. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 P.troglodytes:54

L0PAR6              	100.00%		H2QY86              	100.00%
Bootstrap support for L0PAR6 as seed ortholog is 100%.
Bootstrap support for H2QY86 as seed ortholog is 100%.

Group of orthologs #1422. Best score 54 bits
Score difference with first non-orthologous sequence - P.jiroveci:54 P.troglodytes:54

L0PE69              	100.00%		H2RB51              	100.00%
Bootstrap support for L0PE69 as seed ortholog is 100%.
Bootstrap support for H2RB51 as seed ortholog is 100%.

Group of orthologs #1423. Best score 53 bits
Score difference with first non-orthologous sequence - P.jiroveci:53 P.troglodytes:53

L0P9P1              	100.00%		H2Q090              	100.00%
Bootstrap support for L0P9P1 as seed ortholog is 100%.
Bootstrap support for H2Q090 as seed ortholog is 100%.

Group of orthologs #1424. Best score 53 bits
Score difference with first non-orthologous sequence - P.jiroveci:53 P.troglodytes:53

L0P9L4              	100.00%		H2Q0K6              	100.00%
Bootstrap support for L0P9L4 as seed ortholog is 100%.
Bootstrap support for H2Q0K6 as seed ortholog is 100%.

Group of orthologs #1425. Best score 52 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 P.troglodytes:52

L0PB26              	100.00%		H2R3Q2              	100.00%
                    	       		Q6J6I7              	18.91%
                    	       		H2Q1U7              	17.66%
                    	       		H2QHA8              	17.16%
                    	       		H2QWU0              	16.92%
                    	       		H2RHG6              	16.17%
                    	       		H2QWT9              	14.93%
                    	       		H2QAX8              	14.18%
                    	       		H2QFF4              	14.18%
                    	       		H2QGH7              	11.69%
                    	       		H2RBY1              	10.95%
                    	       		H2QW52              	10.70%
                    	       		H2RBF8              	10.45%
                    	       		H2QK02              	9.70%
                    	       		H2R8V4              	8.71%
                    	       		H2Q928              	8.46%
                    	       		H2QWW6              	8.21%
                    	       		H2QTX0              	7.71%
                    	       		H2Q442              	7.71%
                    	       		H2QG56              	6.72%
Bootstrap support for L0PB26 as seed ortholog is 100%.
Bootstrap support for H2R3Q2 as seed ortholog is 100%.

Group of orthologs #1426. Best score 52 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 P.troglodytes:52

L0PEA4              	100.00%		H2RFM8              	100.00%
                    	       		H2Q2K4              	10.44%
                    	       		H2QNQ1              	10.14%
                    	       		H2PZ80              	7.74%
Bootstrap support for L0PEA4 as seed ortholog is 100%.
Bootstrap support for H2RFM8 as seed ortholog is 100%.

Group of orthologs #1427. Best score 52 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 P.troglodytes:52

L0PB78              	100.00%		H2PYI1              	100.00%
                    	       		H2QKD5              	38.54%
                    	       		H2Q8I9              	27.24%
Bootstrap support for L0PB78 as seed ortholog is 100%.
Bootstrap support for H2PYI1 as seed ortholog is 100%.

Group of orthologs #1428. Best score 52 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 P.troglodytes:52

L0PD80              	100.00%		H2QIE5              	100.00%
Bootstrap support for L0PD80 as seed ortholog is 100%.
Bootstrap support for H2QIE5 as seed ortholog is 100%.

Group of orthologs #1429. Best score 52 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 P.troglodytes:52

L0PDN1              	100.00%		H2QQM8              	100.00%
Bootstrap support for L0PDN1 as seed ortholog is 100%.
Bootstrap support for H2QQM8 as seed ortholog is 100%.

Group of orthologs #1430. Best score 52 bits
Score difference with first non-orthologous sequence - P.jiroveci:52 P.troglodytes:5

L0PGI8              	100.00%		H2QWR9              	100.00%
Bootstrap support for L0PGI8 as seed ortholog is 100%.
Bootstrap support for H2QWR9 as seed ortholog is 54%.
Alternative seed ortholog is H2QI74 (5 bits away from this cluster)

Group of orthologs #1431. Best score 51 bits
Score difference with first non-orthologous sequence - P.jiroveci:51 P.troglodytes:51

L0PF85              	100.00%		H2QFE5              	100.00%
Bootstrap support for L0PF85 as seed ortholog is 100%.
Bootstrap support for H2QFE5 as seed ortholog is 100%.

Group of orthologs #1432. Best score 50 bits
Score difference with first non-orthologous sequence - P.jiroveci:50 P.troglodytes:50

L0PEE9              	100.00%		H2PZ69              	100.00%
                    	       		H2RFQ4              	36.53%
Bootstrap support for L0PEE9 as seed ortholog is 100%.
Bootstrap support for H2PZ69 as seed ortholog is 100%.

Group of orthologs #1433. Best score 50 bits
Score difference with first non-orthologous sequence - P.jiroveci:50 P.troglodytes:50

L0PFV5              	100.00%		G2HG04              	100.00%
Bootstrap support for L0PFV5 as seed ortholog is 100%.
Bootstrap support for G2HG04 as seed ortholog is 100%.

Group of orthologs #1434. Best score 50 bits
Score difference with first non-orthologous sequence - P.jiroveci:50 P.troglodytes:50

L0PHM6              	100.00%		H2QTU7              	100.00%
Bootstrap support for L0PHM6 as seed ortholog is 100%.
Bootstrap support for H2QTU7 as seed ortholog is 100%.

Group of orthologs #1435. Best score 49 bits
Score difference with first non-orthologous sequence - P.jiroveci:49 P.troglodytes:49

L0PGI1              	100.00%		H2QFB7              	100.00%
                    	       		H2R6U4              	25.00%
Bootstrap support for L0PGI1 as seed ortholog is 100%.
Bootstrap support for H2QFB7 as seed ortholog is 100%.

Group of orthologs #1436. Best score 49 bits
Score difference with first non-orthologous sequence - P.jiroveci:49 P.troglodytes:49

L0PFN8              	100.00%		H2RE07              	100.00%
Bootstrap support for L0PFN8 as seed ortholog is 100%.
Bootstrap support for H2RE07 as seed ortholog is 100%.

Group of orthologs #1437. Best score 48 bits
Score difference with first non-orthologous sequence - P.jiroveci:48 P.troglodytes:48

L0P994              	100.00%		H2R0B3              	100.00%
                    	       		H2QZ90              	59.93%
                    	       		H2QZ77              	56.68%
                    	       		H2QZ74              	51.88%
                    	       		H2QZ76              	50.34%
                    	       		H2QZ87              	43.32%
                    	       		H2QYG1              	31.68%
                    	       		H2QYF5              	28.25%
                    	       		H2RH41              	28.08%
                    	       		H2QYF3              	27.40%
                    	       		H2QYF7              	26.03%
                    	       		H2QYC4              	25.51%
                    	       		H2QYF8              	23.12%
                    	       		H2RFB4              	21.40%
                    	       		H2QNW0              	14.38%
                    	       		H2R4I3              	13.36%
                    	       		H2Q916              	8.39%
Bootstrap support for L0P994 as seed ortholog is 100%.
Bootstrap support for H2R0B3 as seed ortholog is 100%.

Group of orthologs #1438. Best score 48 bits
Score difference with first non-orthologous sequence - P.jiroveci:48 P.troglodytes:48

L0P9T4              	100.00%		H2QJG7              	10.17%
L0PFA0              	100.00%		H2QV88              	100.00%
                    	       		H2R818              	9.93%
Bootstrap support for L0P9T4 as seed ortholog is 100%.
Bootstrap support for L0PFA0 as seed ortholog is 100%.
Bootstrap support for H2QV88 as seed ortholog is 100%.

Group of orthologs #1439. Best score 48 bits
Score difference with first non-orthologous sequence - P.jiroveci:48 P.troglodytes:48

L0PGZ4              	100.00%		H2R319              	100.00%
Bootstrap support for L0PGZ4 as seed ortholog is 100%.
Bootstrap support for H2R319 as seed ortholog is 100%.

Group of orthologs #1440. Best score 48 bits
Score difference with first non-orthologous sequence - P.jiroveci:48 P.troglodytes:48

L0PGA3              	100.00%		Q0MQ87              	100.00%
Bootstrap support for L0PGA3 as seed ortholog is 100%.
Bootstrap support for Q0MQ87 as seed ortholog is 100%.

Group of orthologs #1441. Best score 47 bits
Score difference with first non-orthologous sequence - P.jiroveci:47 P.troglodytes:47

L0PBR6              	100.00%		H2QRL1              	100.00%
Bootstrap support for L0PBR6 as seed ortholog is 100%.
Bootstrap support for H2QRL1 as seed ortholog is 100%.

Group of orthologs #1442. Best score 46 bits
Score difference with first non-orthologous sequence - P.jiroveci:46 P.troglodytes:46

L0P9V1              	100.00%		H2R8K5              	100.00%
Bootstrap support for L0P9V1 as seed ortholog is 100%.
Bootstrap support for H2R8K5 as seed ortholog is 100%.

Group of orthologs #1443. Best score 45 bits
Score difference with first non-orthologous sequence - P.jiroveci:45 P.troglodytes:45

L0PEM7              	100.00%		H2QJA8              	100.00%
                    	       		H2Q6C6              	28.50%
                    	       		H2Q896              	15.27%
                    	       		H2Q7R9              	12.47%
Bootstrap support for L0PEM7 as seed ortholog is 100%.
Bootstrap support for H2QJA8 as seed ortholog is 100%.

Group of orthologs #1444. Best score 45 bits
Score difference with first non-orthologous sequence - P.jiroveci:45 P.troglodytes:45

L0P916              	100.00%		H2QRP2              	100.00%
                    	       		H2Q7P1              	49.03%
Bootstrap support for L0P916 as seed ortholog is 100%.
Bootstrap support for H2QRP2 as seed ortholog is 100%.

Group of orthologs #1445. Best score 45 bits
Score difference with first non-orthologous sequence - P.jiroveci:45 P.troglodytes:45

L0PA84              	100.00%		H2R554              	100.00%
L0PGH1              	73.29%		
Bootstrap support for L0PA84 as seed ortholog is 100%.
Bootstrap support for H2R554 as seed ortholog is 100%.

Group of orthologs #1446. Best score 45 bits
Score difference with first non-orthologous sequence - P.jiroveci:45 P.troglodytes:45

L0PA08              	100.00%		H2Q8H6              	100.00%
Bootstrap support for L0PA08 as seed ortholog is 100%.
Bootstrap support for H2Q8H6 as seed ortholog is 100%.

Group of orthologs #1447. Best score 45 bits
Score difference with first non-orthologous sequence - P.jiroveci:45 P.troglodytes:45

L0PDY6              	100.00%		H2QKR4              	100.00%
Bootstrap support for L0PDY6 as seed ortholog is 100%.
Bootstrap support for H2QKR4 as seed ortholog is 100%.

Group of orthologs #1448. Best score 45 bits
Score difference with first non-orthologous sequence - P.jiroveci:45 P.troglodytes:45

L0PFI4              	100.00%		H2QWI2              	100.00%
Bootstrap support for L0PFI4 as seed ortholog is 100%.
Bootstrap support for H2QWI2 as seed ortholog is 100%.

Group of orthologs #1449. Best score 44 bits
Score difference with first non-orthologous sequence - P.jiroveci:44 P.troglodytes:44

L0PCQ1              	100.00%		H2Q3C9              	100.00%
Bootstrap support for L0PCQ1 as seed ortholog is 100%.
Bootstrap support for H2Q3C9 as seed ortholog is 100%.

Group of orthologs #1450. Best score 44 bits
Score difference with first non-orthologous sequence - P.jiroveci:44 P.troglodytes:44

L0PD94              	100.00%		H2QEH8              	100.00%
Bootstrap support for L0PD94 as seed ortholog is 100%.
Bootstrap support for H2QEH8 as seed ortholog is 100%.

Group of orthologs #1451. Best score 44 bits
Score difference with first non-orthologous sequence - P.jiroveci:44 P.troglodytes:44

L0PAV1              	100.00%		H2QKZ5              	100.00%
Bootstrap support for L0PAV1 as seed ortholog is 100%.
Bootstrap support for H2QKZ5 as seed ortholog is 100%.

Group of orthologs #1452. Best score 44 bits
Score difference with first non-orthologous sequence - P.jiroveci:44 P.troglodytes:44

L0PB71              	100.00%		H2QQZ5              	100.00%
Bootstrap support for L0PB71 as seed ortholog is 100%.
Bootstrap support for H2QQZ5 as seed ortholog is 100%.

Group of orthologs #1453. Best score 44 bits
Score difference with first non-orthologous sequence - P.jiroveci:44 P.troglodytes:44

L0PCV0              	100.00%		H2QUH2              	100.00%
Bootstrap support for L0PCV0 as seed ortholog is 100%.
Bootstrap support for H2QUH2 as seed ortholog is 100%.

Group of orthologs #1454. Best score 44 bits
Score difference with first non-orthologous sequence - P.jiroveci:44 P.troglodytes:44

L0P9H2              	100.00%		H2RES7              	100.00%
Bootstrap support for L0P9H2 as seed ortholog is 100%.
Bootstrap support for H2RES7 as seed ortholog is 100%.

Group of orthologs #1455. Best score 44 bits
Score difference with first non-orthologous sequence - P.jiroveci:44 P.troglodytes:44

L0PH50              	100.00%		H2RE48              	100.00%
Bootstrap support for L0PH50 as seed ortholog is 100%.
Bootstrap support for H2RE48 as seed ortholog is 100%.

Group of orthologs #1456. Best score 43 bits
Score difference with first non-orthologous sequence - P.jiroveci:43 P.troglodytes:43

L0P875              	100.00%		H2Q3R6              	100.00%
Bootstrap support for L0P875 as seed ortholog is 100%.
Bootstrap support for H2Q3R6 as seed ortholog is 100%.

Group of orthologs #1457. Best score 41 bits
Score difference with first non-orthologous sequence - P.jiroveci:41 P.troglodytes:41

L0PG70              	100.00%		H2RGU5              	100.00%
Bootstrap support for L0PG70 as seed ortholog is 100%.
Bootstrap support for H2RGU5 as seed ortholog is 100%.