###################################
270 groups of orthologs
378 in-paralogs from P.aeruginosa
318 in-paralogs from P.jiroveci
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 1141 bits
Score difference with first non-orthologous sequence - P.aeruginosa:1141 P.jiroveci:1141

Q9HXN2              	100.00%		L0PF80              	100.00%
Bootstrap support for Q9HXN2 as seed ortholog is 100%.
Bootstrap support for L0PF80 as seed ortholog is 100%.

Group of orthologs #2. Best score 970 bits
Score difference with first non-orthologous sequence - P.aeruginosa:970 P.jiroveci:970

Q9I137              	100.00%		L0P7P6              	100.00%
Q9HTX7              	20.93%		
Bootstrap support for Q9I137 as seed ortholog is 100%.
Bootstrap support for L0P7P6 as seed ortholog is 100%.

Group of orthologs #3. Best score 755 bits
Score difference with first non-orthologous sequence - P.aeruginosa:755 P.jiroveci:755

P38100              	100.00%		L0P7C3              	100.00%
Bootstrap support for P38100 as seed ortholog is 100%.
Bootstrap support for L0P7C3 as seed ortholog is 100%.

Group of orthologs #4. Best score 720 bits
Score difference with first non-orthologous sequence - P.aeruginosa:300 P.jiroveci:152

Q9HV43              	100.00%		L0PFS2              	100.00%
Bootstrap support for Q9HV43 as seed ortholog is 100%.
Bootstrap support for L0PFS2 as seed ortholog is 99%.

Group of orthologs #5. Best score 696 bits
Score difference with first non-orthologous sequence - P.aeruginosa:696 P.jiroveci:696

Q9I3D3              	100.00%		L0PGR4              	100.00%
                    	       		L0PFQ2              	93.06%
Bootstrap support for Q9I3D3 as seed ortholog is 100%.
Bootstrap support for L0PGR4 as seed ortholog is 100%.

Group of orthologs #6. Best score 696 bits
Score difference with first non-orthologous sequence - P.aeruginosa:162 P.jiroveci:696

Q9HVN5              	100.00%		L0P9C7              	100.00%
Bootstrap support for Q9HVN5 as seed ortholog is 99%.
Bootstrap support for L0P9C7 as seed ortholog is 100%.

Group of orthologs #7. Best score 655 bits
Score difference with first non-orthologous sequence - P.aeruginosa:655 P.jiroveci:162

Q9HXH0              	100.00%		L0PDB3              	100.00%
Bootstrap support for Q9HXH0 as seed ortholog is 100%.
Bootstrap support for L0PDB3 as seed ortholog is 99%.

Group of orthologs #8. Best score 618 bits
Score difference with first non-orthologous sequence - P.aeruginosa:618 P.jiroveci:618

Q9I1X1              	100.00%		L0PAQ3              	100.00%
Bootstrap support for Q9I1X1 as seed ortholog is 100%.
Bootstrap support for L0PAQ3 as seed ortholog is 100%.

Group of orthologs #9. Best score 615 bits
Score difference with first non-orthologous sequence - P.aeruginosa:523 P.jiroveci:615

Q9I3D5              	100.00%		L0P9H4              	100.00%
Bootstrap support for Q9I3D5 as seed ortholog is 100%.
Bootstrap support for L0P9H4 as seed ortholog is 100%.

Group of orthologs #10. Best score 570 bits
Score difference with first non-orthologous sequence - P.aeruginosa:417 P.jiroveci:499

Q9HT18              	100.00%		L0P833              	100.00%
                    	       		L0P765              	8.68%
Bootstrap support for Q9HT18 as seed ortholog is 100%.
Bootstrap support for L0P833 as seed ortholog is 100%.

Group of orthologs #11. Best score 551 bits
Score difference with first non-orthologous sequence - P.aeruginosa:551 P.jiroveci:463

P30718              	100.00%		L0PDM6              	100.00%
Bootstrap support for P30718 as seed ortholog is 100%.
Bootstrap support for L0PDM6 as seed ortholog is 100%.

Group of orthologs #12. Best score 539 bits
Score difference with first non-orthologous sequence - P.aeruginosa:539 P.jiroveci:539

Q9I5Y8              	100.00%		L0PF66              	100.00%
Bootstrap support for Q9I5Y8 as seed ortholog is 100%.
Bootstrap support for L0PF66 as seed ortholog is 100%.

Group of orthologs #13. Best score 537 bits
Score difference with first non-orthologous sequence - P.aeruginosa:537 P.jiroveci:537

Q9I553              	100.00%		L0PDQ4              	100.00%
Bootstrap support for Q9I553 as seed ortholog is 100%.
Bootstrap support for L0PDQ4 as seed ortholog is 100%.

Group of orthologs #14. Best score 535 bits
Score difference with first non-orthologous sequence - P.aeruginosa:535 P.jiroveci:535

Q9I5F9              	100.00%		L0PEK9              	100.00%
Bootstrap support for Q9I5F9 as seed ortholog is 100%.
Bootstrap support for L0PEK9 as seed ortholog is 100%.

Group of orthologs #15. Best score 521 bits
Score difference with first non-orthologous sequence - P.aeruginosa:340 P.jiroveci:211

Q9I244              	100.00%		L0PBP8              	100.00%
Q9HWD2              	76.35%		
Bootstrap support for Q9I244 as seed ortholog is 100%.
Bootstrap support for L0PBP8 as seed ortholog is 99%.

Group of orthologs #16. Best score 520 bits
Score difference with first non-orthologous sequence - P.aeruginosa:520 P.jiroveci:520

Q9I4I1              	100.00%		L0PBY6              	100.00%
Bootstrap support for Q9I4I1 as seed ortholog is 100%.
Bootstrap support for L0PBY6 as seed ortholog is 100%.

Group of orthologs #17. Best score 502 bits
Score difference with first non-orthologous sequence - P.aeruginosa:502 P.jiroveci:502

P09591              	100.00%		L0P9G2              	100.00%
Bootstrap support for P09591 as seed ortholog is 100%.
Bootstrap support for L0P9G2 as seed ortholog is 100%.

Group of orthologs #18. Best score 487 bits
Score difference with first non-orthologous sequence - P.aeruginosa:487 P.jiroveci:487

Q51342              	100.00%		L0PA94              	100.00%
Bootstrap support for Q51342 as seed ortholog is 100%.
Bootstrap support for L0PA94 as seed ortholog is 100%.

Group of orthologs #19. Best score 487 bits
Score difference with first non-orthologous sequence - P.aeruginosa:487 P.jiroveci:487

Q9HXM6              	100.00%		L0PAQ1              	100.00%
Bootstrap support for Q9HXM6 as seed ortholog is 100%.
Bootstrap support for L0PAQ1 as seed ortholog is 100%.

Group of orthologs #20. Best score 477 bits
Score difference with first non-orthologous sequence - P.aeruginosa:477 P.jiroveci:477

Q9HT09              	100.00%		L0PCP1              	100.00%
Bootstrap support for Q9HT09 as seed ortholog is 100%.
Bootstrap support for L0PCP1 as seed ortholog is 100%.

Group of orthologs #21. Best score 476 bits
Score difference with first non-orthologous sequence - P.aeruginosa:476 P.jiroveci:476

Q9HX33              	100.00%		L0PBN1              	100.00%
Bootstrap support for Q9HX33 as seed ortholog is 100%.
Bootstrap support for L0PBN1 as seed ortholog is 100%.

Group of orthologs #22. Best score 475 bits
Score difference with first non-orthologous sequence - P.aeruginosa:475 P.jiroveci:303

Q9HVM4              	100.00%		L0PCD8              	100.00%
Bootstrap support for Q9HVM4 as seed ortholog is 100%.
Bootstrap support for L0PCD8 as seed ortholog is 100%.

Group of orthologs #23. Best score 458 bits
Score difference with first non-orthologous sequence - P.aeruginosa:340 P.jiroveci:458

Q9I3C5              	100.00%		L0PAW9              	100.00%
                    	       		L0PBZ0              	84.57%
Bootstrap support for Q9I3C5 as seed ortholog is 100%.
Bootstrap support for L0PAW9 as seed ortholog is 100%.

Group of orthologs #24. Best score 453 bits
Score difference with first non-orthologous sequence - P.aeruginosa:453 P.jiroveci:453

Q9HV67              	100.00%		L0P8P8              	100.00%
Bootstrap support for Q9HV67 as seed ortholog is 100%.
Bootstrap support for L0P8P8 as seed ortholog is 100%.

Group of orthologs #25. Best score 451 bits
Score difference with first non-orthologous sequence - P.aeruginosa:451 P.jiroveci:451

Q9I685              	100.00%		L0PDJ1              	100.00%
Bootstrap support for Q9I685 as seed ortholog is 100%.
Bootstrap support for L0PDJ1 as seed ortholog is 100%.

Group of orthologs #26. Best score 439 bits
Score difference with first non-orthologous sequence - P.aeruginosa:313 P.jiroveci:439

Q9I5G8              	100.00%		L0PBG8              	100.00%
Bootstrap support for Q9I5G8 as seed ortholog is 100%.
Bootstrap support for L0PBG8 as seed ortholog is 100%.

Group of orthologs #27. Best score 436 bits
Score difference with first non-orthologous sequence - P.aeruginosa:4 P.jiroveci:436

Q9HUY1              	100.00%		L0P7Y5              	100.00%
Bootstrap support for Q9HUY1 as seed ortholog is 55%.
Alternative seed ortholog is Q9I3D1 (4 bits away from this cluster)
Bootstrap support for L0P7Y5 as seed ortholog is 100%.

Group of orthologs #28. Best score 431 bits
Score difference with first non-orthologous sequence - P.aeruginosa:182 P.jiroveci:431

Q9HXI8              	100.00%		L0P6Y2              	100.00%
Bootstrap support for Q9HXI8 as seed ortholog is 100%.
Bootstrap support for L0P6Y2 as seed ortholog is 100%.

Group of orthologs #29. Best score 430 bits
Score difference with first non-orthologous sequence - P.aeruginosa:430 P.jiroveci:430

Q9HXZ4              	100.00%		L0PC65              	100.00%
Bootstrap support for Q9HXZ4 as seed ortholog is 100%.
Bootstrap support for L0PC65 as seed ortholog is 100%.

Group of orthologs #30. Best score 427 bits
Score difference with first non-orthologous sequence - P.aeruginosa:183 P.jiroveci:427

Q51390              	100.00%		L0PET9              	100.00%
Q9HY41              	19.97%		
Bootstrap support for Q51390 as seed ortholog is 99%.
Bootstrap support for L0PET9 as seed ortholog is 100%.

Group of orthologs #31. Best score 420 bits
Score difference with first non-orthologous sequence - P.aeruginosa:104 P.jiroveci:420

Q9I587              	100.00%		L0PES7              	100.00%
Bootstrap support for Q9I587 as seed ortholog is 99%.
Bootstrap support for L0PES7 as seed ortholog is 100%.

Group of orthologs #32. Best score 414 bits
Score difference with first non-orthologous sequence - P.aeruginosa:303 P.jiroveci:296

Q9HT20              	100.00%		L0PDC9              	100.00%
Bootstrap support for Q9HT20 as seed ortholog is 100%.
Bootstrap support for L0PDC9 as seed ortholog is 100%.

Group of orthologs #33. Best score 413 bits
Score difference with first non-orthologous sequence - P.aeruginosa:413 P.jiroveci:143

Q9I099              	100.00%		L0P9U5              	100.00%
Bootstrap support for Q9I099 as seed ortholog is 100%.
Bootstrap support for L0P9U5 as seed ortholog is 99%.

Group of orthologs #34. Best score 403 bits
Score difference with first non-orthologous sequence - P.aeruginosa:151 P.jiroveci:25

Q9I3R5              	100.00%		L0PCW9              	100.00%
Bootstrap support for Q9I3R5 as seed ortholog is 99%.
Bootstrap support for L0PCW9 as seed ortholog is 64%.
Alternative seed ortholog is L0P8L4 (25 bits away from this cluster)

Group of orthologs #35. Best score 402 bits
Score difference with first non-orthologous sequence - P.aeruginosa:402 P.jiroveci:402

Q9HYU6              	100.00%		L0PAJ7              	100.00%
                    	       		L0PFC8              	14.73%
                    	       		L0PB13              	12.20%
                    	       		L0P9U6              	9.90%
                    	       		L0PAB1              	9.18%
Bootstrap support for Q9HYU6 as seed ortholog is 100%.
Bootstrap support for L0PAJ7 as seed ortholog is 100%.

Group of orthologs #36. Best score 377 bits
Score difference with first non-orthologous sequence - P.aeruginosa:377 P.jiroveci:377

Q9HT25              	100.00%		L0PAS8              	100.00%
Bootstrap support for Q9HT25 as seed ortholog is 100%.
Bootstrap support for L0PAS8 as seed ortholog is 100%.

Group of orthologs #37. Best score 374 bits
Score difference with first non-orthologous sequence - P.aeruginosa:164 P.jiroveci:374

G3XDA2              	100.00%		L0PEX5              	100.00%
Bootstrap support for G3XDA2 as seed ortholog is 99%.
Bootstrap support for L0PEX5 as seed ortholog is 100%.

Group of orthologs #38. Best score 373 bits
Score difference with first non-orthologous sequence - P.aeruginosa:373 P.jiroveci:373

Q9I5Z0              	100.00%		L0PBR9              	100.00%
Bootstrap support for Q9I5Z0 as seed ortholog is 100%.
Bootstrap support for L0PBR9 as seed ortholog is 100%.

Group of orthologs #39. Best score 368 bits
Score difference with first non-orthologous sequence - P.aeruginosa:368 P.jiroveci:368

Q9HUV8              	100.00%		L0PE57              	100.00%
Bootstrap support for Q9HUV8 as seed ortholog is 100%.
Bootstrap support for L0PE57 as seed ortholog is 100%.

Group of orthologs #40. Best score 363 bits
Score difference with first non-orthologous sequence - P.aeruginosa:192 P.jiroveci:218

Q9HX93              	100.00%		L0PGH3              	100.00%
Bootstrap support for Q9HX93 as seed ortholog is 99%.
Bootstrap support for L0PGH3 as seed ortholog is 99%.

Group of orthologs #41. Best score 349 bits
Score difference with first non-orthologous sequence - P.aeruginosa:127 P.jiroveci:349

Q9I6A0              	100.00%		L0PA23              	100.00%
Bootstrap support for Q9I6A0 as seed ortholog is 99%.
Bootstrap support for L0PA23 as seed ortholog is 100%.

Group of orthologs #42. Best score 342 bits
Score difference with first non-orthologous sequence - P.aeruginosa:342 P.jiroveci:342

Q9HTE9              	100.00%		L0PCX1              	100.00%
Q9I138              	87.06%		
Bootstrap support for Q9HTE9 as seed ortholog is 100%.
Bootstrap support for L0PCX1 as seed ortholog is 100%.

Group of orthologs #43. Best score 334 bits
Score difference with first non-orthologous sequence - P.aeruginosa:130 P.jiroveci:334

G3XD40              	100.00%		L0PA09              	100.00%
Q9I0T1              	34.20%		
Q9I2A8              	7.13%		
Bootstrap support for G3XD40 as seed ortholog is 99%.
Bootstrap support for L0PA09 as seed ortholog is 100%.

Group of orthologs #44. Best score 333 bits
Score difference with first non-orthologous sequence - P.aeruginosa:333 P.jiroveci:333

Q9HUM6              	100.00%		L0PFY1              	100.00%
Bootstrap support for Q9HUM6 as seed ortholog is 100%.
Bootstrap support for L0PFY1 as seed ortholog is 100%.

Group of orthologs #45. Best score 332 bits
Score difference with first non-orthologous sequence - P.aeruginosa:332 P.jiroveci:111

Q9HY08              	100.00%		L0PIP5              	100.00%
Bootstrap support for Q9HY08 as seed ortholog is 100%.
Bootstrap support for L0PIP5 as seed ortholog is 97%.

Group of orthologs #46. Best score 331 bits
Score difference with first non-orthologous sequence - P.aeruginosa:331 P.jiroveci:331

Q51567              	100.00%		L0PGA8              	100.00%
Bootstrap support for Q51567 as seed ortholog is 100%.
Bootstrap support for L0PGA8 as seed ortholog is 100%.

Group of orthologs #47. Best score 329 bits
Score difference with first non-orthologous sequence - P.aeruginosa:329 P.jiroveci:117

Q9HXU0              	100.00%		L0PFG7              	100.00%
Bootstrap support for Q9HXU0 as seed ortholog is 100%.
Bootstrap support for L0PFG7 as seed ortholog is 99%.

Group of orthologs #48. Best score 327 bits
Score difference with first non-orthologous sequence - P.aeruginosa:327 P.jiroveci:327

Q9HXM5              	100.00%		L0P7N3              	100.00%
Bootstrap support for Q9HXM5 as seed ortholog is 100%.
Bootstrap support for L0P7N3 as seed ortholog is 100%.

Group of orthologs #49. Best score 324 bits
Score difference with first non-orthologous sequence - P.aeruginosa:324 P.jiroveci:324

Q9HTZ7              	100.00%		L0PFF6              	100.00%
Bootstrap support for Q9HTZ7 as seed ortholog is 100%.
Bootstrap support for L0PFF6 as seed ortholog is 100%.

Group of orthologs #50. Best score 319 bits
Score difference with first non-orthologous sequence - P.aeruginosa:319 P.jiroveci:319

Q9I0J9              	100.00%		L0PB96              	100.00%
Bootstrap support for Q9I0J9 as seed ortholog is 100%.
Bootstrap support for L0PB96 as seed ortholog is 100%.

Group of orthologs #51. Best score 314 bits
Score difference with first non-orthologous sequence - P.aeruginosa:314 P.jiroveci:70

Q9I2U8              	100.00%		L0PED9              	100.00%
Bootstrap support for Q9I2U8 as seed ortholog is 100%.
Bootstrap support for L0PED9 as seed ortholog is 91%.

Group of orthologs #52. Best score 313 bits
Score difference with first non-orthologous sequence - P.aeruginosa:132 P.jiroveci:313

Q9I000              	100.00%		L0PCR1              	100.00%
Bootstrap support for Q9I000 as seed ortholog is 99%.
Bootstrap support for L0PCR1 as seed ortholog is 100%.

Group of orthologs #53. Best score 312 bits
Score difference with first non-orthologous sequence - P.aeruginosa:312 P.jiroveci:312

Q9I0M5              	100.00%		L0PDI1              	100.00%
Bootstrap support for Q9I0M5 as seed ortholog is 100%.
Bootstrap support for L0PDI1 as seed ortholog is 100%.

Group of orthologs #54. Best score 309 bits
Score difference with first non-orthologous sequence - P.aeruginosa:309 P.jiroveci:160

Q51422              	100.00%		L0P8W4              	100.00%
Bootstrap support for Q51422 as seed ortholog is 100%.
Bootstrap support for L0P8W4 as seed ortholog is 99%.

Group of orthologs #55. Best score 297 bits
Score difference with first non-orthologous sequence - P.aeruginosa:297 P.jiroveci:297

P72173              	100.00%		L0P6T3              	100.00%
P43336              	9.75%		L0PF21              	9.90%
Bootstrap support for P72173 as seed ortholog is 100%.
Bootstrap support for L0P6T3 as seed ortholog is 100%.

Group of orthologs #56. Best score 295 bits
Score difference with first non-orthologous sequence - P.aeruginosa:193 P.jiroveci:295

Q9XCL6              	100.00%		L0PDV1              	100.00%
Bootstrap support for Q9XCL6 as seed ortholog is 100%.
Bootstrap support for L0PDV1 as seed ortholog is 100%.

Group of orthologs #57. Best score 294 bits
Score difference with first non-orthologous sequence - P.aeruginosa:294 P.jiroveci:294

Q9HWC9              	100.00%		L0PB43              	100.00%
                    	       		L0PB90              	18.89%
Bootstrap support for Q9HWC9 as seed ortholog is 100%.
Bootstrap support for L0PB43 as seed ortholog is 100%.

Group of orthologs #58. Best score 294 bits
Score difference with first non-orthologous sequence - P.aeruginosa:294 P.jiroveci:294

Q9I3D2              	100.00%		L0PC17              	100.00%
                    	       		L0PD22              	54.95%
Bootstrap support for Q9I3D2 as seed ortholog is 100%.
Bootstrap support for L0PC17 as seed ortholog is 100%.

Group of orthologs #59. Best score 292 bits
Score difference with first non-orthologous sequence - P.aeruginosa:292 P.jiroveci:62

Q9I5D9              	100.00%		L0PGL4              	100.00%
                    	       		L0P7Q7              	43.03%
                    	       		L0PB83              	7.84%
                    	       		L0PG21              	6.11%
Bootstrap support for Q9I5D9 as seed ortholog is 100%.
Bootstrap support for L0PGL4 as seed ortholog is 87%.

Group of orthologs #60. Best score 291 bits
Score difference with first non-orthologous sequence - P.aeruginosa:291 P.jiroveci:162

Q9HVC5              	100.00%		L0P6V9              	100.00%
Bootstrap support for Q9HVC5 as seed ortholog is 100%.
Bootstrap support for L0P6V9 as seed ortholog is 100%.

Group of orthologs #61. Best score 287 bits
Score difference with first non-orthologous sequence - P.aeruginosa:287 P.jiroveci:287

Q9I0J7              	100.00%		L0P971              	100.00%
Bootstrap support for Q9I0J7 as seed ortholog is 100%.
Bootstrap support for L0P971 as seed ortholog is 100%.

Group of orthologs #62. Best score 281 bits
Score difference with first non-orthologous sequence - P.aeruginosa:90 P.jiroveci:281

Q9I140              	100.00%		L0PF83              	100.00%
Bootstrap support for Q9I140 as seed ortholog is 98%.
Bootstrap support for L0PF83 as seed ortholog is 100%.

Group of orthologs #63. Best score 268 bits
Score difference with first non-orthologous sequence - P.aeruginosa:268 P.jiroveci:268

Q51561              	100.00%		L0PG77              	100.00%
                    	       		L0P9P7              	8.04%
Bootstrap support for Q51561 as seed ortholog is 100%.
Bootstrap support for L0PG77 as seed ortholog is 100%.

Group of orthologs #64. Best score 262 bits
Score difference with first non-orthologous sequence - P.aeruginosa:262 P.jiroveci:262

Q9I344              	100.00%		L0PHL5              	100.00%
Bootstrap support for Q9I344 as seed ortholog is 100%.
Bootstrap support for L0PHL5 as seed ortholog is 100%.

Group of orthologs #65. Best score 260 bits
Score difference with first non-orthologous sequence - P.aeruginosa:65 P.jiroveci:63

Q9HYE0              	100.00%		L0PEM1              	100.00%
Bootstrap support for Q9HYE0 as seed ortholog is 96%.
Bootstrap support for L0PEM1 as seed ortholog is 94%.

Group of orthologs #66. Best score 259 bits
Score difference with first non-orthologous sequence - P.aeruginosa:42 P.jiroveci:39

Q9I689              	100.00%		L0PDY0              	100.00%
Q9HX66              	12.30%		
Bootstrap support for Q9I689 as seed ortholog is 84%.
Bootstrap support for L0PDY0 as seed ortholog is 81%.

Group of orthologs #67. Best score 256 bits
Score difference with first non-orthologous sequence - P.aeruginosa:256 P.jiroveci:256

Q9I047              	100.00%		L0PEZ2              	100.00%
                    	       		L0PH30              	87.85%
Bootstrap support for Q9I047 as seed ortholog is 100%.
Bootstrap support for L0PEZ2 as seed ortholog is 100%.

Group of orthologs #68. Best score 255 bits
Score difference with first non-orthologous sequence - P.aeruginosa:255 P.jiroveci:255

Q9HXH9              	100.00%		L0P7Z6              	100.00%
Bootstrap support for Q9HXH9 as seed ortholog is 100%.
Bootstrap support for L0P7Z6 as seed ortholog is 100%.

Group of orthologs #69. Best score 254 bits
Score difference with first non-orthologous sequence - P.aeruginosa:254 P.jiroveci:254

O68282              	100.00%		L0PG48              	100.00%
Q9HTC7              	29.02%		
Bootstrap support for O68282 as seed ortholog is 100%.
Bootstrap support for L0PG48 as seed ortholog is 100%.

Group of orthologs #70. Best score 253 bits
Score difference with first non-orthologous sequence - P.aeruginosa:253 P.jiroveci:253

Q9HYQ1              	100.00%		L0PFY2              	100.00%
Bootstrap support for Q9HYQ1 as seed ortholog is 100%.
Bootstrap support for L0PFY2 as seed ortholog is 100%.

Group of orthologs #71. Best score 243 bits
Score difference with first non-orthologous sequence - P.aeruginosa:243 P.jiroveci:243

P43898              	100.00%		L0PD99              	100.00%
Bootstrap support for P43898 as seed ortholog is 100%.
Bootstrap support for L0PD99 as seed ortholog is 100%.

Group of orthologs #72. Best score 240 bits
Score difference with first non-orthologous sequence - P.aeruginosa:240 P.jiroveci:240

Q9I2U6              	100.00%		L0P7B5              	100.00%
Bootstrap support for Q9I2U6 as seed ortholog is 100%.
Bootstrap support for L0P7B5 as seed ortholog is 100%.

Group of orthologs #73. Best score 237 bits
Score difference with first non-orthologous sequence - P.aeruginosa:237 P.jiroveci:237

Q9I212              	100.00%		L0PDZ2              	100.00%
Bootstrap support for Q9I212 as seed ortholog is 100%.
Bootstrap support for L0PDZ2 as seed ortholog is 100%.

Group of orthologs #74. Best score 236 bits
Score difference with first non-orthologous sequence - P.aeruginosa:236 P.jiroveci:67

Q9I3D4              	100.00%		L0PD02              	100.00%
Bootstrap support for Q9I3D4 as seed ortholog is 100%.
Bootstrap support for L0PD02 as seed ortholog is 99%.

Group of orthologs #75. Best score 230 bits
Score difference with first non-orthologous sequence - P.aeruginosa:151 P.jiroveci:230

Q9HZ12              	100.00%		L0PBI4              	100.00%
Bootstrap support for Q9HZ12 as seed ortholog is 99%.
Bootstrap support for L0PBI4 as seed ortholog is 100%.

Group of orthologs #76. Best score 230 bits
Score difference with first non-orthologous sequence - P.aeruginosa:230 P.jiroveci:29

Q9HV44              	100.00%		L0PG51              	100.00%
Bootstrap support for Q9HV44 as seed ortholog is 100%.
Bootstrap support for L0PG51 as seed ortholog is 79%.

Group of orthologs #77. Best score 229 bits
Score difference with first non-orthologous sequence - P.aeruginosa:229 P.jiroveci:229

P95458              	100.00%		L0PHG9              	100.00%
Bootstrap support for P95458 as seed ortholog is 100%.
Bootstrap support for L0PHG9 as seed ortholog is 100%.

Group of orthologs #78. Best score 228 bits
Score difference with first non-orthologous sequence - P.aeruginosa:228 P.jiroveci:228

Q9HVT7              	100.00%		L0PGV2              	100.00%
                    	       		L0PG40              	62.64%
Bootstrap support for Q9HVT7 as seed ortholog is 100%.
Bootstrap support for L0PGV2 as seed ortholog is 100%.

Group of orthologs #79. Best score 224 bits
Score difference with first non-orthologous sequence - P.aeruginosa:224 P.jiroveci:224

P38098              	100.00%		L0PG02              	100.00%
Bootstrap support for P38098 as seed ortholog is 100%.
Bootstrap support for L0PG02 as seed ortholog is 100%.

Group of orthologs #80. Best score 221 bits
Score difference with first non-orthologous sequence - P.aeruginosa:221 P.jiroveci:221

Q9HWN0              	100.00%		L0PDT0              	100.00%
Bootstrap support for Q9HWN0 as seed ortholog is 100%.
Bootstrap support for L0PDT0 as seed ortholog is 100%.

Group of orthologs #81. Best score 221 bits
Score difference with first non-orthologous sequence - P.aeruginosa:221 P.jiroveci:221

Q9I502              	100.00%		L0PBY9              	100.00%
Bootstrap support for Q9I502 as seed ortholog is 100%.
Bootstrap support for L0PBY9 as seed ortholog is 100%.

Group of orthologs #82. Best score 219 bits
Score difference with first non-orthologous sequence - P.aeruginosa:91 P.jiroveci:219

Q9HUG8              	100.00%		L0P9A8              	100.00%
Q9I4M2              	10.84%		L0PHB9              	100.00%
Bootstrap support for Q9HUG8 as seed ortholog is 98%.
Bootstrap support for L0P9A8 as seed ortholog is 100%.
Bootstrap support for L0PHB9 as seed ortholog is 100%.

Group of orthologs #83. Best score 217 bits
Score difference with first non-orthologous sequence - P.aeruginosa:217 P.jiroveci:22

Q9I0M6              	100.00%		L0PAU1              	100.00%
Bootstrap support for Q9I0M6 as seed ortholog is 100%.
Bootstrap support for L0PAU1 as seed ortholog is 70%.
Alternative seed ortholog is L0P9N8 (22 bits away from this cluster)

Group of orthologs #84. Best score 216 bits
Score difference with first non-orthologous sequence - P.aeruginosa:216 P.jiroveci:216

Q9I6F1              	100.00%		L0PA65              	100.00%
Bootstrap support for Q9I6F1 as seed ortholog is 100%.
Bootstrap support for L0PA65 as seed ortholog is 100%.

Group of orthologs #85. Best score 215 bits
Score difference with first non-orthologous sequence - P.aeruginosa:96 P.jiroveci:15

Q9HTU2              	100.00%		L0P6U6              	100.00%
Q9I2E0              	9.59%		
Q9HZI7              	5.72%		
Bootstrap support for Q9HTU2 as seed ortholog is 98%.
Bootstrap support for L0P6U6 as seed ortholog is 64%.
Alternative seed ortholog is L0PDF8 (15 bits away from this cluster)

Group of orthologs #86. Best score 214 bits
Score difference with first non-orthologous sequence - P.aeruginosa:214 P.jiroveci:56

Q9HYC8              	100.00%		L0P9R7              	100.00%
Bootstrap support for Q9HYC8 as seed ortholog is 100%.
Bootstrap support for L0P9R7 as seed ortholog is 98%.

Group of orthologs #87. Best score 213 bits
Score difference with first non-orthologous sequence - P.aeruginosa:213 P.jiroveci:213

Q9I3L4              	100.00%		L0PEE3              	100.00%
Q9HW72              	11.53%		
Bootstrap support for Q9I3L4 as seed ortholog is 100%.
Bootstrap support for L0PEE3 as seed ortholog is 100%.

Group of orthologs #88. Best score 212 bits
Score difference with first non-orthologous sequence - P.aeruginosa:81 P.jiroveci:212

Q9HXP8              	100.00%		L0PFN9              	100.00%
                    	       		L0PEF0              	32.11%
Bootstrap support for Q9HXP8 as seed ortholog is 98%.
Bootstrap support for L0PFN9 as seed ortholog is 100%.

Group of orthologs #89. Best score 211 bits
Score difference with first non-orthologous sequence - P.aeruginosa:211 P.jiroveci:211

Q9HYG8              	100.00%		L0P723              	100.00%
Bootstrap support for Q9HYG8 as seed ortholog is 100%.
Bootstrap support for L0P723 as seed ortholog is 100%.

Group of orthologs #90. Best score 209 bits
Score difference with first non-orthologous sequence - P.aeruginosa:209 P.jiroveci:209

Q9I5H9              	100.00%		L0PDH2              	100.00%
Bootstrap support for Q9I5H9 as seed ortholog is 100%.
Bootstrap support for L0PDH2 as seed ortholog is 100%.

Group of orthologs #91. Best score 203 bits
Score difference with first non-orthologous sequence - P.aeruginosa:203 P.jiroveci:203

Q60169              	100.00%		L0P9Y7              	100.00%
Bootstrap support for Q60169 as seed ortholog is 100%.
Bootstrap support for L0P9Y7 as seed ortholog is 100%.

Group of orthologs #92. Best score 203 bits
Score difference with first non-orthologous sequence - P.aeruginosa:203 P.jiroveci:203

Q9HUC8              	100.00%		L0PCW8              	100.00%
Bootstrap support for Q9HUC8 as seed ortholog is 100%.
Bootstrap support for L0PCW8 as seed ortholog is 100%.

Group of orthologs #93. Best score 196 bits
Score difference with first non-orthologous sequence - P.aeruginosa:196 P.jiroveci:196

Q9HWD5              	100.00%		L0PEZ4              	100.00%
Bootstrap support for Q9HWD5 as seed ortholog is 100%.
Bootstrap support for L0PEZ4 as seed ortholog is 100%.

Group of orthologs #94. Best score 195 bits
Score difference with first non-orthologous sequence - P.aeruginosa:195 P.jiroveci:195

P42806              	100.00%		L0PGW6              	100.00%
Bootstrap support for P42806 as seed ortholog is 100%.
Bootstrap support for L0PGW6 as seed ortholog is 100%.

Group of orthologs #95. Best score 192 bits
Score difference with first non-orthologous sequence - P.aeruginosa:192 P.jiroveci:44

Q9I3I6              	100.00%		L0PGL8              	100.00%
Bootstrap support for Q9I3I6 as seed ortholog is 100%.
Bootstrap support for L0PGL8 as seed ortholog is 74%.
Alternative seed ortholog is L0PBH9 (44 bits away from this cluster)

Group of orthologs #96. Best score 190 bits
Score difference with first non-orthologous sequence - P.aeruginosa:190 P.jiroveci:190

Q9HUV9              	100.00%		L0PBN0              	100.00%
Bootstrap support for Q9HUV9 as seed ortholog is 100%.
Bootstrap support for L0PBN0 as seed ortholog is 100%.

Group of orthologs #97. Best score 189 bits
Score difference with first non-orthologous sequence - P.aeruginosa:189 P.jiroveci:100

Q9HWD8              	100.00%		L0PEA3              	100.00%
Bootstrap support for Q9HWD8 as seed ortholog is 100%.
Bootstrap support for L0PEA3 as seed ortholog is 99%.

Group of orthologs #98. Best score 189 bits
Score difference with first non-orthologous sequence - P.aeruginosa:189 P.jiroveci:189

Q9HZF8              	100.00%		L0PG08              	100.00%
Bootstrap support for Q9HZF8 as seed ortholog is 100%.
Bootstrap support for L0PG08 as seed ortholog is 100%.

Group of orthologs #99. Best score 187 bits
Score difference with first non-orthologous sequence - P.aeruginosa:187 P.jiroveci:187

Q9I0L2              	100.00%		L0PD52              	100.00%
                    	       		L0PDL8              	90.67%
Bootstrap support for Q9I0L2 as seed ortholog is 100%.
Bootstrap support for L0PD52 as seed ortholog is 100%.

Group of orthologs #100. Best score 187 bits
Score difference with first non-orthologous sequence - P.aeruginosa:187 P.jiroveci:187

Q9HZI1              	100.00%		L0P9S1              	100.00%
Bootstrap support for Q9HZI1 as seed ortholog is 100%.
Bootstrap support for L0P9S1 as seed ortholog is 100%.

Group of orthologs #101. Best score 187 bits
Score difference with first non-orthologous sequence - P.aeruginosa:187 P.jiroveci:187

Q9HYZ3              	100.00%		L0PEC6              	100.00%
Bootstrap support for Q9HYZ3 as seed ortholog is 100%.
Bootstrap support for L0PEC6 as seed ortholog is 100%.

Group of orthologs #102. Best score 185 bits
Score difference with first non-orthologous sequence - P.aeruginosa:185 P.jiroveci:185

O50274              	100.00%		L0PFD9              	100.00%
                    	       		L0P7N1              	8.38%
                    	       		L0PBA5              	8.31%
Bootstrap support for O50274 as seed ortholog is 100%.
Bootstrap support for L0PFD9 as seed ortholog is 100%.

Group of orthologs #103. Best score 184 bits
Score difference with first non-orthologous sequence - P.aeruginosa:184 P.jiroveci:184

Q9I0J6              	100.00%		L0P7K0              	100.00%
Bootstrap support for Q9I0J6 as seed ortholog is 100%.
Bootstrap support for L0P7K0 as seed ortholog is 100%.

Group of orthologs #104. Best score 184 bits
Score difference with first non-orthologous sequence - P.aeruginosa:184 P.jiroveci:184

Q9HT07              	100.00%		L0PG43              	100.00%
Bootstrap support for Q9HT07 as seed ortholog is 100%.
Bootstrap support for L0PG43 as seed ortholog is 100%.

Group of orthologs #105. Best score 181 bits
Score difference with first non-orthologous sequence - P.aeruginosa:87 P.jiroveci:181

Q9I4S5              	100.00%		L0PF65              	100.00%
Bootstrap support for Q9I4S5 as seed ortholog is 99%.
Bootstrap support for L0PF65 as seed ortholog is 100%.

Group of orthologs #106. Best score 175 bits
Score difference with first non-orthologous sequence - P.aeruginosa:175 P.jiroveci:175

Q9HTQ8              	100.00%		L0P9P8              	100.00%
G3XD04              	19.08%		
Bootstrap support for Q9HTQ8 as seed ortholog is 100%.
Bootstrap support for L0P9P8 as seed ortholog is 100%.

Group of orthologs #107. Best score 175 bits
Score difference with first non-orthologous sequence - P.aeruginosa:175 P.jiroveci:175

P72170              	100.00%		L0PI19              	100.00%
Bootstrap support for P72170 as seed ortholog is 100%.
Bootstrap support for L0PI19 as seed ortholog is 100%.

Group of orthologs #108. Best score 175 bits
Score difference with first non-orthologous sequence - P.aeruginosa:175 P.jiroveci:175

Q9HVT8              	100.00%		L0PEA1              	100.00%
Bootstrap support for Q9HVT8 as seed ortholog is 100%.
Bootstrap support for L0PEA1 as seed ortholog is 100%.

Group of orthologs #109. Best score 175 bits
Score difference with first non-orthologous sequence - P.aeruginosa:175 P.jiroveci:112

Q9HXV4              	100.00%		L0PEX1              	100.00%
Bootstrap support for Q9HXV4 as seed ortholog is 100%.
Bootstrap support for L0PEX1 as seed ortholog is 99%.

Group of orthologs #110. Best score 173 bits
Score difference with first non-orthologous sequence - P.aeruginosa:173 P.jiroveci:173

Q9I5E4              	100.00%		L0PFN4              	100.00%
Q9I3F5              	34.51%		
Bootstrap support for Q9I5E4 as seed ortholog is 100%.
Bootstrap support for L0PFN4 as seed ortholog is 100%.

Group of orthologs #111. Best score 173 bits
Score difference with first non-orthologous sequence - P.aeruginosa:173 P.jiroveci:11

Q9HUL8              	100.00%		L0PG96              	100.00%
Bootstrap support for Q9HUL8 as seed ortholog is 100%.
Bootstrap support for L0PG96 as seed ortholog is 64%.
Alternative seed ortholog is L0PGJ5 (11 bits away from this cluster)

Group of orthologs #112. Best score 173 bits
Score difference with first non-orthologous sequence - P.aeruginosa:173 P.jiroveci:173

Q9HXI9              	100.00%		L0PDW5              	100.00%
Bootstrap support for Q9HXI9 as seed ortholog is 100%.
Bootstrap support for L0PDW5 as seed ortholog is 100%.

Group of orthologs #113. Best score 172 bits
Score difference with first non-orthologous sequence - P.aeruginosa:172 P.jiroveci:172

Q9HUM7              	100.00%		L0PC37              	100.00%
Bootstrap support for Q9HUM7 as seed ortholog is 100%.
Bootstrap support for L0PC37 as seed ortholog is 100%.

Group of orthologs #114. Best score 169 bits
Score difference with first non-orthologous sequence - P.aeruginosa:31 P.jiroveci:169

Q9I017              	100.00%		L0PF58              	100.00%
Bootstrap support for Q9I017 as seed ortholog is 91%.
Bootstrap support for L0PF58 as seed ortholog is 100%.

Group of orthologs #115. Best score 168 bits
Score difference with first non-orthologous sequence - P.aeruginosa:168 P.jiroveci:168

Q9HV51              	100.00%		L0PF73              	100.00%
Bootstrap support for Q9HV51 as seed ortholog is 100%.
Bootstrap support for L0PF73 as seed ortholog is 100%.

Group of orthologs #116. Best score 168 bits
Score difference with first non-orthologous sequence - P.aeruginosa:168 P.jiroveci:8

Q9I617              	100.00%		L0PBF6              	100.00%
Bootstrap support for Q9I617 as seed ortholog is 100%.
Bootstrap support for L0PBF6 as seed ortholog is 56%.
Alternative seed ortholog is L0PAA4 (8 bits away from this cluster)

Group of orthologs #117. Best score 165 bits
Score difference with first non-orthologous sequence - P.aeruginosa:34 P.jiroveci:165

Q9I0L5              	100.00%		L0PB68              	100.00%
                    	       		L0PCQ8              	26.21%
Bootstrap support for Q9I0L5 as seed ortholog is 78%.
Bootstrap support for L0PB68 as seed ortholog is 100%.

Group of orthologs #118. Best score 165 bits
Score difference with first non-orthologous sequence - P.aeruginosa:165 P.jiroveci:165

Q9HWX4              	100.00%		L0PBV3              	100.00%
Bootstrap support for Q9HWX4 as seed ortholog is 100%.
Bootstrap support for L0PBV3 as seed ortholog is 100%.

Group of orthologs #119. Best score 165 bits
Score difference with first non-orthologous sequence - P.aeruginosa:74 P.jiroveci:165

Q9I2U1              	100.00%		L0PC06              	100.00%
Bootstrap support for Q9I2U1 as seed ortholog is 99%.
Bootstrap support for L0PC06 as seed ortholog is 100%.

Group of orthologs #120. Best score 164 bits
Score difference with first non-orthologous sequence - P.aeruginosa:164 P.jiroveci:164

Q9I1M0              	100.00%		L0PCP3              	100.00%
Q59638              	11.38%		
Bootstrap support for Q9I1M0 as seed ortholog is 100%.
Bootstrap support for L0PCP3 as seed ortholog is 100%.

Group of orthologs #121. Best score 161 bits
Score difference with first non-orthologous sequence - P.aeruginosa:161 P.jiroveci:161

Q9I5I5              	100.00%		L0PBP9              	100.00%
Bootstrap support for Q9I5I5 as seed ortholog is 100%.
Bootstrap support for L0PBP9 as seed ortholog is 100%.

Group of orthologs #122. Best score 160 bits
Score difference with first non-orthologous sequence - P.aeruginosa:160 P.jiroveci:160

P50587              	100.00%		L0PHP6              	100.00%
Bootstrap support for P50587 as seed ortholog is 100%.
Bootstrap support for L0PHP6 as seed ortholog is 100%.

Group of orthologs #123. Best score 158 bits
Score difference with first non-orthologous sequence - P.aeruginosa:158 P.jiroveci:158

Q59643              	100.00%		L0PEY2              	100.00%
Bootstrap support for Q59643 as seed ortholog is 100%.
Bootstrap support for L0PEY2 as seed ortholog is 100%.

Group of orthologs #124. Best score 153 bits
Score difference with first non-orthologous sequence - P.aeruginosa:153 P.jiroveci:153

Q9HU37              	100.00%		L0PBG0              	100.00%
Bootstrap support for Q9HU37 as seed ortholog is 100%.
Bootstrap support for L0PBG0 as seed ortholog is 100%.

Group of orthologs #125. Best score 153 bits
Score difference with first non-orthologous sequence - P.aeruginosa:54 P.jiroveci:153

P72158              	100.00%		L0PDU5              	100.00%
Bootstrap support for P72158 as seed ortholog is 90%.
Bootstrap support for L0PDU5 as seed ortholog is 100%.

Group of orthologs #126. Best score 152 bits
Score difference with first non-orthologous sequence - P.aeruginosa:48 P.jiroveci:84

Q9I6A3              	100.00%		L0PCY2              	100.00%
Bootstrap support for Q9I6A3 as seed ortholog is 96%.
Bootstrap support for L0PCY2 as seed ortholog is 75%.

Group of orthologs #127. Best score 148 bits
Score difference with first non-orthologous sequence - P.aeruginosa:148 P.jiroveci:148

Q9HZ63              	100.00%		L0PA35              	100.00%
Bootstrap support for Q9HZ63 as seed ortholog is 100%.
Bootstrap support for L0PA35 as seed ortholog is 100%.

Group of orthologs #128. Best score 146 bits
Score difference with first non-orthologous sequence - P.aeruginosa:146 P.jiroveci:146

Q9I5T1              	100.00%		L0PBE8              	100.00%
Bootstrap support for Q9I5T1 as seed ortholog is 100%.
Bootstrap support for L0PBE8 as seed ortholog is 100%.

Group of orthologs #129. Best score 144 bits
Score difference with first non-orthologous sequence - P.aeruginosa:144 P.jiroveci:144

Q9I165              	100.00%		L0PBH3              	100.00%
Bootstrap support for Q9I165 as seed ortholog is 100%.
Bootstrap support for L0PBH3 as seed ortholog is 100%.

Group of orthologs #130. Best score 142 bits
Score difference with first non-orthologous sequence - P.aeruginosa:142 P.jiroveci:142

P20580              	100.00%		L0PG33              	100.00%
Q9I2Y1              	13.16%		
P09785              	11.48%		
Bootstrap support for P20580 as seed ortholog is 100%.
Bootstrap support for L0PG33 as seed ortholog is 100%.

Group of orthologs #131. Best score 142 bits
Score difference with first non-orthologous sequence - P.aeruginosa:142 P.jiroveci:142

Q9HWY1              	100.00%		L0P923              	100.00%
Bootstrap support for Q9HWY1 as seed ortholog is 100%.
Bootstrap support for L0P923 as seed ortholog is 100%.

Group of orthologs #132. Best score 139 bits
Score difference with first non-orthologous sequence - P.aeruginosa:139 P.jiroveci:139

P57665              	100.00%		L0P9G8              	100.00%
                    	       		L0PDI0              	56.10%
Bootstrap support for P57665 as seed ortholog is 100%.
Bootstrap support for L0P9G8 as seed ortholog is 100%.

Group of orthologs #133. Best score 138 bits
Score difference with first non-orthologous sequence - P.aeruginosa:138 P.jiroveci:138

Q9HXY2              	100.00%		L0PFS1              	100.00%
Bootstrap support for Q9HXY2 as seed ortholog is 100%.
Bootstrap support for L0PFS1 as seed ortholog is 100%.

Group of orthologs #134. Best score 137 bits
Score difference with first non-orthologous sequence - P.aeruginosa:68 P.jiroveci:137

Q9I3A5              	100.00%		L0PGR0              	100.00%
Bootstrap support for Q9I3A5 as seed ortholog is 92%.
Bootstrap support for L0PGR0 as seed ortholog is 100%.

Group of orthologs #135. Best score 136 bits
Score difference with first non-orthologous sequence - P.aeruginosa:136 P.jiroveci:136

Q9HVC2              	100.00%		L0P9P0              	100.00%
Bootstrap support for Q9HVC2 as seed ortholog is 100%.
Bootstrap support for L0P9P0 as seed ortholog is 100%.

Group of orthologs #136. Best score 133 bits
Score difference with first non-orthologous sequence - P.aeruginosa:133 P.jiroveci:133

Q9HVY4              	100.00%		L0P896              	100.00%
Bootstrap support for Q9HVY4 as seed ortholog is 100%.
Bootstrap support for L0P896 as seed ortholog is 100%.

Group of orthologs #137. Best score 133 bits
Score difference with first non-orthologous sequence - P.aeruginosa:133 P.jiroveci:133

Q9HUK8              	100.00%		L0PAD9              	100.00%
Bootstrap support for Q9HUK8 as seed ortholog is 100%.
Bootstrap support for L0PAD9 as seed ortholog is 100%.

Group of orthologs #138. Best score 133 bits
Score difference with first non-orthologous sequence - P.aeruginosa:133 P.jiroveci:25

Q9I0A3              	100.00%		L0P7R5              	100.00%
Bootstrap support for Q9I0A3 as seed ortholog is 100%.
Bootstrap support for L0P7R5 as seed ortholog is 70%.
Alternative seed ortholog is L0PER3 (25 bits away from this cluster)

Group of orthologs #139. Best score 130 bits
Score difference with first non-orthologous sequence - P.aeruginosa:130 P.jiroveci:130

P30819              	100.00%		L0PFX9              	100.00%
Bootstrap support for P30819 as seed ortholog is 100%.
Bootstrap support for L0PFX9 as seed ortholog is 100%.

Group of orthologs #140. Best score 129 bits
Score difference with first non-orthologous sequence - P.aeruginosa:129 P.jiroveci:129

Q9HXY1              	100.00%		L0P957              	100.00%
Q9I095              	41.75%		
Bootstrap support for Q9HXY1 as seed ortholog is 100%.
Bootstrap support for L0P957 as seed ortholog is 100%.

Group of orthologs #141. Best score 125 bits
Score difference with first non-orthologous sequence - P.aeruginosa:40 P.jiroveci:125

Q9HYU3              	100.00%		L0PGL1              	100.00%
Q9HYU4              	100.00%		
Q9I0S7              	14.24%		
Q9HXE6              	7.12%		
Bootstrap support for Q9HYU3 as seed ortholog is 77%.
Bootstrap support for Q9HYU4 as seed ortholog is 83%.
Bootstrap support for L0PGL1 as seed ortholog is 100%.

Group of orthologs #142. Best score 125 bits
Score difference with first non-orthologous sequence - P.aeruginosa:125 P.jiroveci:24

Q9HYC7              	100.00%		L0PET5              	100.00%
Bootstrap support for Q9HYC7 as seed ortholog is 100%.
Bootstrap support for L0PET5 as seed ortholog is 69%.
Alternative seed ortholog is L0PA88 (24 bits away from this cluster)

Group of orthologs #143. Best score 123 bits
Score difference with first non-orthologous sequence - P.aeruginosa:123 P.jiroveci:123

Q9HV55              	100.00%		L0PEP7              	100.00%
Bootstrap support for Q9HV55 as seed ortholog is 100%.
Bootstrap support for L0PEP7 as seed ortholog is 100%.

Group of orthologs #144. Best score 121 bits
Score difference with first non-orthologous sequence - P.aeruginosa:121 P.jiroveci:121

Q9HZJ5              	100.00%		L0P8R6              	100.00%
Bootstrap support for Q9HZJ5 as seed ortholog is 100%.
Bootstrap support for L0P8R6 as seed ortholog is 100%.

Group of orthologs #145. Best score 121 bits
Score difference with first non-orthologous sequence - P.aeruginosa:121 P.jiroveci:121

Q9I7A9              	100.00%		L0P921              	100.00%
Bootstrap support for Q9I7A9 as seed ortholog is 100%.
Bootstrap support for L0P921 as seed ortholog is 100%.

Group of orthologs #146. Best score 120 bits
Score difference with first non-orthologous sequence - P.aeruginosa:120 P.jiroveci:120

Q9HXM1              	100.00%		L0PCK5              	100.00%
                    	       		L0PGY9              	58.68%
                    	       		L0PA98              	32.49%
                    	       		L0P826              	17.82%
Bootstrap support for Q9HXM1 as seed ortholog is 100%.
Bootstrap support for L0PCK5 as seed ortholog is 100%.

Group of orthologs #147. Best score 120 bits
Score difference with first non-orthologous sequence - P.aeruginosa:49 P.jiroveci:59

Q9I2T7              	100.00%		L0P905              	100.00%
Q9I254              	52.93%		
Bootstrap support for Q9I2T7 as seed ortholog is 56%.
Alternative seed ortholog is Q9I6Z6 (49 bits away from this cluster)
Bootstrap support for L0P905 as seed ortholog is 87%.

Group of orthologs #148. Best score 119 bits
Score difference with first non-orthologous sequence - P.aeruginosa:119 P.jiroveci:119

Q9HVQ8              	100.00%		L0P9R8              	100.00%
Bootstrap support for Q9HVQ8 as seed ortholog is 100%.
Bootstrap support for L0P9R8 as seed ortholog is 100%.

Group of orthologs #149. Best score 118 bits
Score difference with first non-orthologous sequence - P.aeruginosa:118 P.jiroveci:118

Q9HZC0              	100.00%		L0PA92              	100.00%
                    	       		L0P8X8              	48.14%
Bootstrap support for Q9HZC0 as seed ortholog is 100%.
Bootstrap support for L0PA92 as seed ortholog is 100%.

Group of orthologs #150. Best score 118 bits
Score difference with first non-orthologous sequence - P.aeruginosa:118 P.jiroveci:118

Q9HVX6              	100.00%		L0PAG8              	100.00%
Bootstrap support for Q9HVX6 as seed ortholog is 100%.
Bootstrap support for L0PAG8 as seed ortholog is 100%.

Group of orthologs #151. Best score 118 bits
Score difference with first non-orthologous sequence - P.aeruginosa:118 P.jiroveci:118

Q9HWC5              	100.00%		L0PCZ5              	100.00%
Bootstrap support for Q9HWC5 as seed ortholog is 100%.
Bootstrap support for L0PCZ5 as seed ortholog is 100%.

Group of orthologs #152. Best score 117 bits
Score difference with first non-orthologous sequence - P.aeruginosa:117 P.jiroveci:117

Q9I719              	100.00%		L0PD44              	100.00%
Q9I423              	5.48%		
Bootstrap support for Q9I719 as seed ortholog is 100%.
Bootstrap support for L0PD44 as seed ortholog is 100%.

Group of orthologs #153. Best score 116 bits
Score difference with first non-orthologous sequence - P.aeruginosa:58 P.jiroveci:116

Q9HVU6              	100.00%		L0P746              	100.00%
Bootstrap support for Q9HVU6 as seed ortholog is 93%.
Bootstrap support for L0P746 as seed ortholog is 100%.

Group of orthologs #154. Best score 116 bits
Score difference with first non-orthologous sequence - P.aeruginosa:116 P.jiroveci:74

Q9HWD0              	100.00%		L0P8A1              	100.00%
Bootstrap support for Q9HWD0 as seed ortholog is 100%.
Bootstrap support for L0P8A1 as seed ortholog is 99%.

Group of orthologs #155. Best score 116 bits
Score difference with first non-orthologous sequence - P.aeruginosa:116 P.jiroveci:116

P95454              	100.00%		L0PDB7              	100.00%
Bootstrap support for P95454 as seed ortholog is 100%.
Bootstrap support for L0PDB7 as seed ortholog is 100%.

Group of orthologs #156. Best score 116 bits
Score difference with first non-orthologous sequence - P.aeruginosa:64 P.jiroveci:116

Q9I2T1              	100.00%		L0P838              	100.00%
Bootstrap support for Q9I2T1 as seed ortholog is 97%.
Bootstrap support for L0P838 as seed ortholog is 100%.

Group of orthologs #157. Best score 116 bits
Score difference with first non-orthologous sequence - P.aeruginosa:116 P.jiroveci:116

Q9HZA8              	100.00%		L0PF87              	100.00%
Bootstrap support for Q9HZA8 as seed ortholog is 100%.
Bootstrap support for L0PF87 as seed ortholog is 100%.

Group of orthologs #158. Best score 116 bits
Score difference with first non-orthologous sequence - P.aeruginosa:116 P.jiroveci:116

Q9I6G1              	100.00%		L0PFR9              	100.00%
Bootstrap support for Q9I6G1 as seed ortholog is 100%.
Bootstrap support for L0PFR9 as seed ortholog is 100%.

Group of orthologs #159. Best score 114 bits
Score difference with first non-orthologous sequence - P.aeruginosa:114 P.jiroveci:114

Q9HTW1              	100.00%		L0PCP5              	100.00%
Bootstrap support for Q9HTW1 as seed ortholog is 100%.
Bootstrap support for L0PCP5 as seed ortholog is 100%.

Group of orthologs #160. Best score 113 bits
Score difference with first non-orthologous sequence - P.aeruginosa:113 P.jiroveci:113

Q9HVL5              	100.00%		L0PAG1              	100.00%
Bootstrap support for Q9HVL5 as seed ortholog is 100%.
Bootstrap support for L0PAG1 as seed ortholog is 100%.

Group of orthologs #161. Best score 112 bits
Score difference with first non-orthologous sequence - P.aeruginosa:11 P.jiroveci:58

O54438              	100.00%		L0P903              	100.00%
Q9HV22              	11.08%		
Q9HWN3              	8.03%		
Q9I2R8              	8.03%		
Q9HWT9              	7.48%		
Q9HZ96              	5.82%		
Q9HT49              	5.82%		
Q9I6V0              	5.26%		
Bootstrap support for O54438 as seed ortholog is 66%.
Alternative seed ortholog is Q9I0W7 (11 bits away from this cluster)
Bootstrap support for L0P903 as seed ortholog is 97%.

Group of orthologs #162. Best score 111 bits
Score difference with first non-orthologous sequence - P.aeruginosa:111 P.jiroveci:111

Q9HWQ5              	100.00%		L0P8P4              	100.00%
Q9I1Q3              	25.76%		
Q9I1L1              	12.22%		
Bootstrap support for Q9HWQ5 as seed ortholog is 100%.
Bootstrap support for L0P8P4 as seed ortholog is 100%.

Group of orthologs #163. Best score 105 bits
Score difference with first non-orthologous sequence - P.aeruginosa:105 P.jiroveci:105

Q9HTW6              	100.00%		L0PFQ7              	100.00%
Bootstrap support for Q9HTW6 as seed ortholog is 100%.
Bootstrap support for L0PFQ7 as seed ortholog is 100%.

Group of orthologs #164. Best score 103 bits
Score difference with first non-orthologous sequence - P.aeruginosa:103 P.jiroveci:103

Q9HXG4              	100.00%		L0P7L9              	100.00%
Bootstrap support for Q9HXG4 as seed ortholog is 100%.
Bootstrap support for L0P7L9 as seed ortholog is 100%.

Group of orthologs #165. Best score 102 bits
Score difference with first non-orthologous sequence - P.aeruginosa:102 P.jiroveci:53

P53652              	100.00%		L0PD77              	100.00%
P53641              	28.62%		
Bootstrap support for P53652 as seed ortholog is 100%.
Bootstrap support for L0PD77 as seed ortholog is 94%.

Group of orthologs #166. Best score 101 bits
Score difference with first non-orthologous sequence - P.aeruginosa:101 P.jiroveci:101

O82850              	100.00%		L0PFQ6              	100.00%
Bootstrap support for O82850 as seed ortholog is 100%.
Bootstrap support for L0PFQ6 as seed ortholog is 100%.

Group of orthologs #167. Best score 101 bits
Score difference with first non-orthologous sequence - P.aeruginosa:9 P.jiroveci:101

Q9HZY0              	100.00%		L0PFQ3              	100.00%
Bootstrap support for Q9HZY0 as seed ortholog is 55%.
Alternative seed ortholog is Q9HY53 (9 bits away from this cluster)
Bootstrap support for L0PFQ3 as seed ortholog is 100%.

Group of orthologs #168. Best score 100 bits
Score difference with first non-orthologous sequence - P.aeruginosa:100 P.jiroveci:100

Q9HVF9              	100.00%		L0PIT4              	100.00%
Bootstrap support for Q9HVF9 as seed ortholog is 100%.
Bootstrap support for L0PIT4 as seed ortholog is 100%.

Group of orthologs #169. Best score 100 bits
Score difference with first non-orthologous sequence - P.aeruginosa:100 P.jiroveci:100

Q9I692              	100.00%		L0PIW1              	100.00%
Bootstrap support for Q9I692 as seed ortholog is 100%.
Bootstrap support for L0PIW1 as seed ortholog is 100%.

Group of orthologs #170. Best score 99 bits
Score difference with first non-orthologous sequence - P.aeruginosa:99 P.jiroveci:99

Q9HYB4              	100.00%		L0P8J0              	100.00%
Bootstrap support for Q9HYB4 as seed ortholog is 100%.
Bootstrap support for L0P8J0 as seed ortholog is 100%.

Group of orthologs #171. Best score 99 bits
Score difference with first non-orthologous sequence - P.aeruginosa:99 P.jiroveci:99

Q9I514              	100.00%		L0PCU7              	100.00%
Bootstrap support for Q9I514 as seed ortholog is 100%.
Bootstrap support for L0PCU7 as seed ortholog is 100%.

Group of orthologs #172. Best score 98 bits
Score difference with first non-orthologous sequence - P.aeruginosa:43 P.jiroveci:98

Q9HY92              	100.00%		L0PFT7              	100.00%
Q9HY93              	29.40%		
Q9I6Q8              	18.57%		
Bootstrap support for Q9HY92 as seed ortholog is 84%.
Bootstrap support for L0PFT7 as seed ortholog is 100%.

Group of orthologs #173. Best score 98 bits
Score difference with first non-orthologous sequence - P.aeruginosa:98 P.jiroveci:98

P14165              	100.00%		L0PDR3              	100.00%
Q9I5E3              	10.55%		
Bootstrap support for P14165 as seed ortholog is 100%.
Bootstrap support for L0PDR3 as seed ortholog is 100%.

Group of orthologs #174. Best score 97 bits
Score difference with first non-orthologous sequence - P.aeruginosa:97 P.jiroveci:97

Q9I5U5              	100.00%		L0P8G8              	100.00%
Bootstrap support for Q9I5U5 as seed ortholog is 100%.
Bootstrap support for L0P8G8 as seed ortholog is 100%.

Group of orthologs #175. Best score 96 bits
Score difference with first non-orthologous sequence - P.aeruginosa:96 P.jiroveci:96

P24562              	100.00%		L0P8Y0              	100.00%
Bootstrap support for P24562 as seed ortholog is 100%.
Bootstrap support for L0P8Y0 as seed ortholog is 100%.

Group of orthologs #176. Best score 95 bits
Score difference with first non-orthologous sequence - P.aeruginosa:95 P.jiroveci:95

Q9HTM2              	100.00%		L0PAN5              	100.00%
Bootstrap support for Q9HTM2 as seed ortholog is 100%.
Bootstrap support for L0PAN5 as seed ortholog is 100%.

Group of orthologs #177. Best score 95 bits
Score difference with first non-orthologous sequence - P.aeruginosa:95 P.jiroveci:41

Q9HWE7              	100.00%		L0PBK3              	100.00%
Bootstrap support for Q9HWE7 as seed ortholog is 100%.
Bootstrap support for L0PBK3 as seed ortholog is 93%.

Group of orthologs #178. Best score 95 bits
Score difference with first non-orthologous sequence - P.aeruginosa:95 P.jiroveci:95

Q9I5V7              	100.00%		L0PIR9              	100.00%
Bootstrap support for Q9I5V7 as seed ortholog is 100%.
Bootstrap support for L0PIR9 as seed ortholog is 100%.

Group of orthologs #179. Best score 94 bits
Score difference with first non-orthologous sequence - P.aeruginosa:94 P.jiroveci:94

Q9HT19              	100.00%		L0P8C9              	100.00%
Bootstrap support for Q9HT19 as seed ortholog is 100%.
Bootstrap support for L0P8C9 as seed ortholog is 100%.

Group of orthologs #180. Best score 94 bits
Score difference with first non-orthologous sequence - P.aeruginosa:94 P.jiroveci:94

Q9HWD6              	100.00%		L0PAW5              	100.00%
Bootstrap support for Q9HWD6 as seed ortholog is 100%.
Bootstrap support for L0PAW5 as seed ortholog is 100%.

Group of orthologs #181. Best score 94 bits
Score difference with first non-orthologous sequence - P.aeruginosa:94 P.jiroveci:94

Q9HVY2              	100.00%		L0PDS8              	100.00%
Bootstrap support for Q9HVY2 as seed ortholog is 100%.
Bootstrap support for L0PDS8 as seed ortholog is 100%.

Group of orthologs #182. Best score 93 bits
Score difference with first non-orthologous sequence - P.aeruginosa:93 P.jiroveci:93

Q9HT57              	100.00%		L0PA48              	100.00%
Bootstrap support for Q9HT57 as seed ortholog is 100%.
Bootstrap support for L0PA48 as seed ortholog is 100%.

Group of orthologs #183. Best score 93 bits
Score difference with first non-orthologous sequence - P.aeruginosa:93 P.jiroveci:93

Q9HV42              	100.00%		L0P8K4              	100.00%
Bootstrap support for Q9HV42 as seed ortholog is 100%.
Bootstrap support for L0P8K4 as seed ortholog is 100%.

Group of orthologs #184. Best score 92 bits
Score difference with first non-orthologous sequence - P.aeruginosa:92 P.jiroveci:92

Q9HUW1              	100.00%		L0PCV1              	100.00%
Q9HZ95              	7.45%		
Bootstrap support for Q9HUW1 as seed ortholog is 100%.
Bootstrap support for L0PCV1 as seed ortholog is 100%.

Group of orthologs #185. Best score 91 bits
Score difference with first non-orthologous sequence - P.aeruginosa:91 P.jiroveci:91

Q9HY77              	100.00%		L0PFV4              	100.00%
Bootstrap support for Q9HY77 as seed ortholog is 100%.
Bootstrap support for L0PFV4 as seed ortholog is 100%.

Group of orthologs #186. Best score 89 bits
Score difference with first non-orthologous sequence - P.aeruginosa:89 P.jiroveci:89

Q9HY12              	100.00%		L0PB12              	100.00%
Bootstrap support for Q9HY12 as seed ortholog is 100%.
Bootstrap support for L0PB12 as seed ortholog is 100%.

Group of orthologs #187. Best score 88 bits
Score difference with first non-orthologous sequence - P.aeruginosa:17 P.jiroveci:41

Q9HUX8              	100.00%		L0PD97              	100.00%
Q9I5R3              	16.27%		
Bootstrap support for Q9HUX8 as seed ortholog is 81%.
Bootstrap support for L0PD97 as seed ortholog is 93%.

Group of orthologs #188. Best score 86 bits
Score difference with first non-orthologous sequence - P.aeruginosa:86 P.jiroveci:86

Q59649              	100.00%		L0P9H8              	100.00%
Bootstrap support for Q59649 as seed ortholog is 100%.
Bootstrap support for L0P9H8 as seed ortholog is 100%.

Group of orthologs #189. Best score 85 bits
Score difference with first non-orthologous sequence - P.aeruginosa:85 P.jiroveci:85

Q9I2M9              	100.00%		L0PD55              	100.00%
                    	       		L0PE41              	5.88%
Bootstrap support for Q9I2M9 as seed ortholog is 100%.
Bootstrap support for L0PD55 as seed ortholog is 100%.

Group of orthologs #190. Best score 84 bits
Score difference with first non-orthologous sequence - P.aeruginosa:84 P.jiroveci:84

Q9HWX5              	100.00%		L0PBL4              	100.00%
Bootstrap support for Q9HWX5 as seed ortholog is 100%.
Bootstrap support for L0PBL4 as seed ortholog is 100%.

Group of orthologs #191. Best score 84 bits
Score difference with first non-orthologous sequence - P.aeruginosa:84 P.jiroveci:84

Q9I0M0              	100.00%		L0PCJ8              	100.00%
Bootstrap support for Q9I0M0 as seed ortholog is 100%.
Bootstrap support for L0PCJ8 as seed ortholog is 100%.

Group of orthologs #192. Best score 83 bits
Score difference with first non-orthologous sequence - P.aeruginosa:83 P.jiroveci:83

Q9HV50              	100.00%		L0P9C9              	100.00%
P26276              	5.00%		
Bootstrap support for Q9HV50 as seed ortholog is 100%.
Bootstrap support for L0P9C9 as seed ortholog is 100%.

Group of orthologs #193. Best score 82 bits
Score difference with first non-orthologous sequence - P.aeruginosa:18 P.jiroveci:82

Q51546              	100.00%		L0PEH1              	100.00%
Q9I488              	11.04%		L0PCR9              	6.31%
Q9HWI9              	10.83%		
Q9I405              	9.77%		
Q9HYY6              	9.13%		
Q9HT70              	8.92%		
Q9HU32              	8.70%		
Q9HU89              	8.49%		
Q9HXC2              	8.49%		
Q9HUA9              	8.28%		
Q9I1C8              	8.07%		
O30506              	8.07%		
Q9HTI8              	7.01%		
Q9I6G5              	6.58%		
Q9HZS1              	6.37%		
Q9I6L0              	6.16%		
Q9HVW1              	5.73%		
Q9I6I9              	5.73%		
Q9HY19              	5.73%		
Q9HZ51              	5.73%		
Q9I6T2              	5.73%		
Bootstrap support for Q51546 as seed ortholog is 74%.
Alternative seed ortholog is Q9I6C0 (18 bits away from this cluster)
Bootstrap support for L0PEH1 as seed ortholog is 100%.

Group of orthologs #194. Best score 82 bits
Score difference with first non-orthologous sequence - P.aeruginosa:82 P.jiroveci:82

Q9HVN9              	100.00%		L0P8V0              	100.00%
Bootstrap support for Q9HVN9 as seed ortholog is 100%.
Bootstrap support for L0P8V0 as seed ortholog is 100%.

Group of orthologs #195. Best score 81 bits
Score difference with first non-orthologous sequence - P.aeruginosa:81 P.jiroveci:81

O52761              	100.00%		L0P724              	100.00%
Bootstrap support for O52761 as seed ortholog is 100%.
Bootstrap support for L0P724 as seed ortholog is 100%.

Group of orthologs #196. Best score 81 bits
Score difference with first non-orthologous sequence - P.aeruginosa:81 P.jiroveci:81

Q9I5Q6              	100.00%		L0PBZ3              	100.00%
Bootstrap support for Q9I5Q6 as seed ortholog is 100%.
Bootstrap support for L0PBZ3 as seed ortholog is 100%.

Group of orthologs #197. Best score 81 bits
Score difference with first non-orthologous sequence - P.aeruginosa:81 P.jiroveci:81

Q9I5Y1              	100.00%		L0PEU3              	100.00%
Bootstrap support for Q9I5Y1 as seed ortholog is 100%.
Bootstrap support for L0PEU3 as seed ortholog is 100%.

Group of orthologs #198. Best score 80 bits
Score difference with first non-orthologous sequence - P.aeruginosa:80 P.jiroveci:80

Q9HXU5              	100.00%		L0PFZ6              	100.00%
                    	       		L0P7L2              	96.84%
Bootstrap support for Q9HXU5 as seed ortholog is 100%.
Bootstrap support for L0PFZ6 as seed ortholog is 100%.

Group of orthologs #199. Best score 79 bits
Score difference with first non-orthologous sequence - P.aeruginosa:79 P.jiroveci:3

Q9HYD9              	100.00%		L0PEN4              	100.00%
Q9I6Q3              	13.45%		
Q9HUR3              	13.21%		
Q9I2A3              	12.61%		
Q9I201              	11.88%		
Q9HUR0              	11.39%		
Q9HWJ4              	9.45%		
Q9I4V5              	8.97%		
Q9I110              	8.61%		
Bootstrap support for Q9HYD9 as seed ortholog is 100%.
Bootstrap support for L0PEN4 as seed ortholog is 47%.
Alternative seed ortholog is L0PFA3 (3 bits away from this cluster)

Group of orthologs #200. Best score 79 bits
Score difference with first non-orthologous sequence - P.aeruginosa:18 P.jiroveci:79

Q9HTF3              	100.00%		L0PDS3              	100.00%
                    	       		L0P8A5              	16.78%
                    	       		L0PBK7              	16.32%
Bootstrap support for Q9HTF3 as seed ortholog is 72%.
Alternative seed ortholog is Q9I0W6 (18 bits away from this cluster)
Bootstrap support for L0PDS3 as seed ortholog is 100%.

Group of orthologs #201. Best score 78 bits
Score difference with first non-orthologous sequence - P.aeruginosa:78 P.jiroveci:78

Q9HWE2              	100.00%		L0P875              	100.00%
Bootstrap support for Q9HWE2 as seed ortholog is 100%.
Bootstrap support for L0P875 as seed ortholog is 100%.

Group of orthologs #202. Best score 78 bits
Score difference with first non-orthologous sequence - P.aeruginosa:78 P.jiroveci:24

Q9HWF7              	100.00%		L0PBR8              	100.00%
Bootstrap support for Q9HWF7 as seed ortholog is 100%.
Bootstrap support for L0PBR8 as seed ortholog is 89%.

Group of orthologs #203. Best score 78 bits
Score difference with first non-orthologous sequence - P.aeruginosa:78 P.jiroveci:78

Q9I4W5              	100.00%		L0PHW2              	100.00%
Bootstrap support for Q9I4W5 as seed ortholog is 100%.
Bootstrap support for L0PHW2 as seed ortholog is 100%.

Group of orthologs #204. Best score 77 bits
Score difference with first non-orthologous sequence - P.aeruginosa:77 P.jiroveci:77

O87016              	100.00%		L0P949              	100.00%
Bootstrap support for O87016 as seed ortholog is 100%.
Bootstrap support for L0P949 as seed ortholog is 100%.

Group of orthologs #205. Best score 77 bits
Score difference with first non-orthologous sequence - P.aeruginosa:77 P.jiroveci:77

Q9HXS4              	100.00%		L0PBU9              	100.00%
Bootstrap support for Q9HXS4 as seed ortholog is 100%.
Bootstrap support for L0PBU9 as seed ortholog is 100%.

Group of orthologs #206. Best score 76 bits
Score difference with first non-orthologous sequence - P.aeruginosa:76 P.jiroveci:76

Q9I567              	100.00%		L0PDE8              	100.00%
Bootstrap support for Q9I567 as seed ortholog is 100%.
Bootstrap support for L0PDE8 as seed ortholog is 100%.

Group of orthologs #207. Best score 75 bits
Score difference with first non-orthologous sequence - P.aeruginosa:75 P.jiroveci:16

Q9I354              	100.00%		L0PAY3              	100.00%
                    	       		L0PCJ3              	42.96%
                    	       		L0PA26              	31.71%
                    	       		L0PF10              	31.71%
                    	       		L0P980              	26.27%
                    	       		L0PD71              	24.95%
                    	       		L0P9Z0              	18.20%
                    	       		L0PBU5              	9.01%
                    	       		L0PE30              	8.82%
                    	       		L0P6W2              	7.88%
Bootstrap support for Q9I354 as seed ortholog is 100%.
Bootstrap support for L0PAY3 as seed ortholog is 70%.
Alternative seed ortholog is L0PAR1 (16 bits away from this cluster)

Group of orthologs #208. Best score 75 bits
Score difference with first non-orthologous sequence - P.aeruginosa:75 P.jiroveci:75

Q9HXJ0              	100.00%		L0PG46              	100.00%
Bootstrap support for Q9HXJ0 as seed ortholog is 100%.
Bootstrap support for L0PG46 as seed ortholog is 100%.

Group of orthologs #209. Best score 75 bits
Score difference with first non-orthologous sequence - P.aeruginosa:75 P.jiroveci:75

Q9I725              	100.00%		L0PD11              	100.00%
Bootstrap support for Q9I725 as seed ortholog is 100%.
Bootstrap support for L0PD11 as seed ortholog is 100%.

Group of orthologs #210. Best score 74 bits
Score difference with first non-orthologous sequence - P.aeruginosa:74 P.jiroveci:74

Q9HWF4              	100.00%		L0P8T2              	100.00%
                    	       		L0PA19              	100.00%
Bootstrap support for Q9HWF4 as seed ortholog is 100%.
Bootstrap support for L0P8T2 as seed ortholog is 100%.
Bootstrap support for L0PA19 as seed ortholog is 100%.

Group of orthologs #211. Best score 73 bits
Score difference with first non-orthologous sequence - P.aeruginosa:73 P.jiroveci:73

Q9HXP9              	100.00%		L0PCN6              	100.00%
Bootstrap support for Q9HXP9 as seed ortholog is 100%.
Bootstrap support for L0PCN6 as seed ortholog is 100%.

Group of orthologs #212. Best score 72 bits
Score difference with first non-orthologous sequence - P.aeruginosa:72 P.jiroveci:72

Q9I4L0              	100.00%		L0PFK9              	100.00%
Q9I4E1              	9.73%		
Bootstrap support for Q9I4L0 as seed ortholog is 100%.
Bootstrap support for L0PFK9 as seed ortholog is 100%.

Group of orthologs #213. Best score 72 bits
Score difference with first non-orthologous sequence - P.aeruginosa:72 P.jiroveci:72

Q9I6C2              	100.00%		L0PBY2              	100.00%
Bootstrap support for Q9I6C2 as seed ortholog is 100%.
Bootstrap support for L0PBY2 as seed ortholog is 100%.

Group of orthologs #214. Best score 71 bits
Score difference with first non-orthologous sequence - P.aeruginosa:71 P.jiroveci:71

O54439              	100.00%		L0PAS9              	100.00%
O52658              	8.97%		
Bootstrap support for O54439 as seed ortholog is 100%.
Bootstrap support for L0PAS9 as seed ortholog is 100%.

Group of orthologs #215. Best score 70 bits
Score difference with first non-orthologous sequence - P.aeruginosa:70 P.jiroveci:70

Q9HVU3              	100.00%		L0PBL2              	100.00%
Q9HZN2              	10.70%		
Bootstrap support for Q9HVU3 as seed ortholog is 100%.
Bootstrap support for L0PBL2 as seed ortholog is 100%.

Group of orthologs #216. Best score 70 bits
Score difference with first non-orthologous sequence - P.aeruginosa:70 P.jiroveci:70

P30720              	100.00%		L0PD91              	100.00%
Bootstrap support for P30720 as seed ortholog is 100%.
Bootstrap support for L0PD91 as seed ortholog is 100%.

Group of orthologs #217. Best score 70 bits
Score difference with first non-orthologous sequence - P.aeruginosa:70 P.jiroveci:70

Q51383              	100.00%		L0PD86              	100.00%
Bootstrap support for Q51383 as seed ortholog is 100%.
Bootstrap support for L0PD86 as seed ortholog is 100%.

Group of orthologs #218. Best score 70 bits
Score difference with first non-orthologous sequence - P.aeruginosa:19 P.jiroveci:70

Q9HXM8              	100.00%		L0PDX2              	100.00%
Bootstrap support for Q9HXM8 as seed ortholog is 83%.
Bootstrap support for L0PDX2 as seed ortholog is 100%.

Group of orthologs #219. Best score 69 bits
Score difference with first non-orthologous sequence - P.aeruginosa:69 P.jiroveci:69

Q9HWD1              	100.00%		L0P8D1              	100.00%
Bootstrap support for Q9HWD1 as seed ortholog is 100%.
Bootstrap support for L0P8D1 as seed ortholog is 100%.

Group of orthologs #220. Best score 69 bits
Score difference with first non-orthologous sequence - P.aeruginosa:69 P.jiroveci:69

Q9I0U8              	100.00%		L0PB54              	100.00%
Bootstrap support for Q9I0U8 as seed ortholog is 100%.
Bootstrap support for L0PB54 as seed ortholog is 100%.

Group of orthologs #221. Best score 67 bits
Score difference with first non-orthologous sequence - P.aeruginosa:67 P.jiroveci:67

Q9I4E6              	100.00%		L0P7L7              	100.00%
Bootstrap support for Q9I4E6 as seed ortholog is 100%.
Bootstrap support for L0P7L7 as seed ortholog is 100%.

Group of orthologs #222. Best score 67 bits
Score difference with first non-orthologous sequence - P.aeruginosa:67 P.jiroveci:67

Q9I2L9              	100.00%		L0PFG9              	100.00%
Bootstrap support for Q9I2L9 as seed ortholog is 100%.
Bootstrap support for L0PFG9 as seed ortholog is 100%.

Group of orthologs #223. Best score 66 bits
Score difference with first non-orthologous sequence - P.aeruginosa:66 P.jiroveci:66

Q9HWC6              	100.00%		L0P8C5              	100.00%
                    	       		L0P7X3              	60.92%
Bootstrap support for Q9HWC6 as seed ortholog is 100%.
Bootstrap support for L0P8C5 as seed ortholog is 100%.

Group of orthologs #224. Best score 65 bits
Score difference with first non-orthologous sequence - P.aeruginosa:65 P.jiroveci:65

Q9I274              	100.00%		L0PGG9              	100.00%
Q9HY29              	37.67%		
Q9I6G9              	34.54%		
Q9HT63              	25.39%		
Bootstrap support for Q9I274 as seed ortholog is 100%.
Bootstrap support for L0PGG9 as seed ortholog is 100%.

Group of orthologs #225. Best score 65 bits
Score difference with first non-orthologous sequence - P.aeruginosa:65 P.jiroveci:65

Q9HT17              	100.00%		L0PCI9              	100.00%
Bootstrap support for Q9HT17 as seed ortholog is 100%.
Bootstrap support for L0PCI9 as seed ortholog is 100%.

Group of orthologs #226. Best score 64 bits
Score difference with first non-orthologous sequence - P.aeruginosa:64 P.jiroveci:64

Q9I2S9              	100.00%		L0PBQ5              	100.00%
Bootstrap support for Q9I2S9 as seed ortholog is 100%.
Bootstrap support for L0PBQ5 as seed ortholog is 100%.

Group of orthologs #227. Best score 64 bits
Score difference with first non-orthologous sequence - P.aeruginosa:64 P.jiroveci:64

Q9I339              	100.00%		L0PGG1              	100.00%
Bootstrap support for Q9I339 as seed ortholog is 100%.
Bootstrap support for L0PGG1 as seed ortholog is 100%.

Group of orthologs #228. Best score 63 bits
Score difference with first non-orthologous sequence - P.aeruginosa:63 P.jiroveci:63

Q9HU55              	100.00%		L0PA37              	100.00%
Bootstrap support for Q9HU55 as seed ortholog is 100%.
Bootstrap support for L0PA37 as seed ortholog is 100%.

Group of orthologs #229. Best score 63 bits
Score difference with first non-orthologous sequence - P.aeruginosa:63 P.jiroveci:63

Q9HXJ5              	100.00%		L0PCY5              	100.00%
Bootstrap support for Q9HXJ5 as seed ortholog is 100%.
Bootstrap support for L0PCY5 as seed ortholog is 100%.

Group of orthologs #230. Best score 62 bits
Score difference with first non-orthologous sequence - P.aeruginosa:62 P.jiroveci:62

Q9HXF5              	100.00%		L0P897              	100.00%
Bootstrap support for Q9HXF5 as seed ortholog is 100%.
Bootstrap support for L0P897 as seed ortholog is 100%.

Group of orthologs #231. Best score 62 bits
Score difference with first non-orthologous sequence - P.aeruginosa:17 P.jiroveci:62

Q9X2T1              	100.00%		L0P9W7              	100.00%
Bootstrap support for Q9X2T1 as seed ortholog is 80%.
Bootstrap support for L0P9W7 as seed ortholog is 100%.

Group of orthologs #232. Best score 62 bits
Score difference with first non-orthologous sequence - P.aeruginosa:62 P.jiroveci:62

Q9X2N2              	100.00%		L0PAW7              	100.00%
Bootstrap support for Q9X2N2 as seed ortholog is 100%.
Bootstrap support for L0PAW7 as seed ortholog is 100%.

Group of orthologs #233. Best score 61 bits
Score difference with first non-orthologous sequence - P.aeruginosa:61 P.jiroveci:61

Q9HUM2              	100.00%		L0PDF2              	100.00%
Bootstrap support for Q9HUM2 as seed ortholog is 100%.
Bootstrap support for L0PDF2 as seed ortholog is 100%.

Group of orthologs #234. Best score 59 bits
Score difference with first non-orthologous sequence - P.aeruginosa:59 P.jiroveci:59

Q59641              	100.00%		L0PFQ4              	100.00%
Q9I2U9              	38.06%		L0PAA8              	12.95%
Bootstrap support for Q59641 as seed ortholog is 100%.
Bootstrap support for L0PFQ4 as seed ortholog is 100%.

Group of orthologs #235. Best score 59 bits
Score difference with first non-orthologous sequence - P.aeruginosa:59 P.jiroveci:59

Q9HT21              	100.00%		L0PBK9              	100.00%
Bootstrap support for Q9HT21 as seed ortholog is 100%.
Bootstrap support for L0PBK9 as seed ortholog is 100%.

Group of orthologs #236. Best score 59 bits
Score difference with first non-orthologous sequence - P.aeruginosa:59 P.jiroveci:59

Q9I6E3              	100.00%		L0P7T1              	100.00%
Bootstrap support for Q9I6E3 as seed ortholog is 100%.
Bootstrap support for L0P7T1 as seed ortholog is 100%.

Group of orthologs #237. Best score 58 bits
Score difference with first non-orthologous sequence - P.aeruginosa:12 P.jiroveci:58

Q9I7C1              	100.00%		L0PC89              	100.00%
Bootstrap support for Q9I7C1 as seed ortholog is 57%.
Alternative seed ortholog is Q9HW50 (12 bits away from this cluster)
Bootstrap support for L0PC89 as seed ortholog is 100%.

Group of orthologs #238. Best score 57 bits
Score difference with first non-orthologous sequence - P.aeruginosa:57 P.jiroveci:57

Q9HWD4              	100.00%		L0P9N4              	100.00%
Bootstrap support for Q9HWD4 as seed ortholog is 100%.
Bootstrap support for L0P9N4 as seed ortholog is 100%.

Group of orthologs #239. Best score 56 bits
Score difference with first non-orthologous sequence - P.aeruginosa:56 P.jiroveci:56

Q9HY64              	100.00%		L0PD68              	100.00%
Q9HUZ1              	16.01%		
Bootstrap support for Q9HY64 as seed ortholog is 100%.
Bootstrap support for L0PD68 as seed ortholog is 100%.

Group of orthologs #240. Best score 56 bits
Score difference with first non-orthologous sequence - P.aeruginosa:56 P.jiroveci:56

Q9I0T9              	100.00%		L0PBX9              	100.00%
Q9HWK9              	16.80%		
Bootstrap support for Q9I0T9 as seed ortholog is 100%.
Bootstrap support for L0PBX9 as seed ortholog is 100%.

Group of orthologs #241. Best score 56 bits
Score difference with first non-orthologous sequence - P.aeruginosa:56 P.jiroveci:56

Q03268              	100.00%		L0PGC0              	100.00%
Bootstrap support for Q03268 as seed ortholog is 100%.
Bootstrap support for L0PGC0 as seed ortholog is 100%.

Group of orthologs #242. Best score 55 bits
Score difference with first non-orthologous sequence - P.aeruginosa:10 P.jiroveci:55

Q9I766              	100.00%		L0PCK2              	100.00%
P40882              	23.70%		
Q9HT34              	5.52%		
Bootstrap support for Q9I766 as seed ortholog is 65%.
Alternative seed ortholog is Q9HXF3 (10 bits away from this cluster)
Bootstrap support for L0PCK2 as seed ortholog is 100%.

Group of orthologs #243. Best score 55 bits
Score difference with first non-orthologous sequence - P.aeruginosa:55 P.jiroveci:55

Q9HT28              	100.00%		L0P7E2              	100.00%
Bootstrap support for Q9HT28 as seed ortholog is 100%.
Bootstrap support for L0P7E2 as seed ortholog is 100%.

Group of orthologs #244. Best score 55 bits
Score difference with first non-orthologous sequence - P.aeruginosa:55 P.jiroveci:55

Q9HWE5              	100.00%		L0PCA8              	100.00%
Bootstrap support for Q9HWE5 as seed ortholog is 100%.
Bootstrap support for L0PCA8 as seed ortholog is 100%.

Group of orthologs #245. Best score 54 bits
Score difference with first non-orthologous sequence - P.aeruginosa:54 P.jiroveci:54

Q9I2F4              	100.00%		L0PG86              	100.00%
Q9HUG9              	5.39%		
Q9HY56              	5.39%		
Bootstrap support for Q9I2F4 as seed ortholog is 100%.
Bootstrap support for L0PG86 as seed ortholog is 100%.

Group of orthologs #246. Best score 52 bits
Score difference with first non-orthologous sequence - P.aeruginosa:52 P.jiroveci:52

Q9HTV6              	100.00%		L0PDS6              	100.00%
Q9I4J8              	17.83%		
P43903              	16.98%		
Q9I0F8              	15.11%		
Q9HYY4              	13.58%		
Q9HTD9              	11.38%		
Q9I578              	10.19%		
Q9I0Z1              	8.83%		
Q9HY50              	6.96%		
Q9I2R2              	6.62%		
Bootstrap support for Q9HTV6 as seed ortholog is 100%.
Bootstrap support for L0PDS6 as seed ortholog is 100%.

Group of orthologs #247. Best score 52 bits
Score difference with first non-orthologous sequence - P.aeruginosa:52 P.jiroveci:52

O86428              	100.00%		L0PE74              	100.00%
Bootstrap support for O86428 as seed ortholog is 100%.
Bootstrap support for L0PE74 as seed ortholog is 100%.

Group of orthologs #248. Best score 51 bits
Score difference with first non-orthologous sequence - P.aeruginosa:51 P.jiroveci:51

Q9HVD7              	100.00%		L0PCI3              	100.00%
Bootstrap support for Q9HVD7 as seed ortholog is 100%.
Bootstrap support for L0PCI3 as seed ortholog is 100%.

Group of orthologs #249. Best score 51 bits
Score difference with first non-orthologous sequence - P.aeruginosa:51 P.jiroveci:51

Q9I6K4              	100.00%		L0PFP0              	100.00%
Bootstrap support for Q9I6K4 as seed ortholog is 100%.
Bootstrap support for L0PFP0 as seed ortholog is 100%.

Group of orthologs #250. Best score 50 bits
Score difference with first non-orthologous sequence - P.aeruginosa:50 P.jiroveci:50

Q9HVC9              	100.00%		L0PC85              	100.00%
Bootstrap support for Q9HVC9 as seed ortholog is 100%.
Bootstrap support for L0PC85 as seed ortholog is 100%.

Group of orthologs #251. Best score 50 bits
Score difference with first non-orthologous sequence - P.aeruginosa:50 P.jiroveci:50

Q9HWE4              	100.00%		L0PBX7              	100.00%
Bootstrap support for Q9HWE4 as seed ortholog is 100%.
Bootstrap support for L0PBX7 as seed ortholog is 100%.

Group of orthologs #252. Best score 50 bits
Score difference with first non-orthologous sequence - P.aeruginosa:50 P.jiroveci:50

Q9I5H0              	100.00%		L0P9E5              	100.00%
Bootstrap support for Q9I5H0 as seed ortholog is 100%.
Bootstrap support for L0P9E5 as seed ortholog is 100%.

Group of orthologs #253. Best score 49 bits
Score difference with first non-orthologous sequence - P.aeruginosa:49 P.jiroveci:49

Q9I3A0              	100.00%		L0PDY2              	100.00%
Bootstrap support for Q9I3A0 as seed ortholog is 100%.
Bootstrap support for L0PDY2 as seed ortholog is 100%.

Group of orthologs #254. Best score 48 bits
Score difference with first non-orthologous sequence - P.aeruginosa:48 P.jiroveci:48

Q9I4W0              	100.00%		L0PFN8              	100.00%
Bootstrap support for Q9I4W0 as seed ortholog is 100%.
Bootstrap support for L0PFN8 as seed ortholog is 100%.

Group of orthologs #255. Best score 47 bits
Score difference with first non-orthologous sequence - P.aeruginosa:47 P.jiroveci:47

Q9I355              	100.00%		L0P913              	100.00%
Q9I757              	33.72%		L0PGH8              	10.62%
Bootstrap support for Q9I355 as seed ortholog is 100%.
Bootstrap support for L0P913 as seed ortholog is 100%.

Group of orthologs #256. Best score 47 bits
Score difference with first non-orthologous sequence - P.aeruginosa:47 P.jiroveci:47

P08280              	100.00%		L0PDH7              	100.00%
                    	       		L0PFP2              	39.37%
Bootstrap support for P08280 as seed ortholog is 100%.
Bootstrap support for L0PDH7 as seed ortholog is 100%.

Group of orthologs #257. Best score 46 bits
Score difference with first non-orthologous sequence - P.aeruginosa:46 P.jiroveci:46

G3XD34              	100.00%		L0P8Q3              	100.00%
Q9HYV6              	13.78%		
Bootstrap support for G3XD34 as seed ortholog is 100%.
Bootstrap support for L0P8Q3 as seed ortholog is 100%.

Group of orthologs #258. Best score 46 bits
Score difference with first non-orthologous sequence - P.aeruginosa:46 P.jiroveci:46

Q59654              	100.00%		L0PID4              	100.00%
                    	       		L0PGF7              	59.71%
Bootstrap support for Q59654 as seed ortholog is 100%.
Bootstrap support for L0PID4 as seed ortholog is 100%.

Group of orthologs #259. Best score 46 bits
Score difference with first non-orthologous sequence - P.aeruginosa:46 P.jiroveci:46

Q9I615              	100.00%		L0P9L7              	100.00%
Q9I4H6              	5.16%		
Bootstrap support for Q9I615 as seed ortholog is 100%.
Bootstrap support for L0P9L7 as seed ortholog is 100%.

Group of orthologs #260. Best score 46 bits
Score difference with first non-orthologous sequence - P.aeruginosa:46 P.jiroveci:46

P50597              	100.00%		L0P9T6              	100.00%
Bootstrap support for P50597 as seed ortholog is 100%.
Bootstrap support for L0P9T6 as seed ortholog is 100%.

Group of orthologs #261. Best score 46 bits
Score difference with first non-orthologous sequence - P.aeruginosa:46 P.jiroveci:46

Q9I5R6              	100.00%		L0PBG3              	100.00%
Bootstrap support for Q9I5R6 as seed ortholog is 100%.
Bootstrap support for L0PBG3 as seed ortholog is 100%.

Group of orthologs #262. Best score 45 bits
Score difference with first non-orthologous sequence - P.aeruginosa:45 P.jiroveci:45

Q9HW46              	100.00%		L0PI66              	100.00%
Q9HYQ9              	24.79%		
Q9HZR4              	24.07%		
Q9HYU1              	23.07%		
Q9HWR7              	19.63%		
Q9I223              	17.91%		
Q01602              	13.04%		
Q9I1G1              	12.03%		
Q9HT26              	9.60%		
Bootstrap support for Q9HW46 as seed ortholog is 100%.
Bootstrap support for L0PI66 as seed ortholog is 100%.

Group of orthologs #263. Best score 45 bits
Score difference with first non-orthologous sequence - P.aeruginosa:45 P.jiroveci:45

Q9I5Q3              	100.00%		L0PAH2              	100.00%
Q9HWP3              	13.13%		
Bootstrap support for Q9I5Q3 as seed ortholog is 100%.
Bootstrap support for L0PAH2 as seed ortholog is 100%.

Group of orthologs #264. Best score 45 bits
Score difference with first non-orthologous sequence - P.aeruginosa:45 P.jiroveci:45

Q9HWF6              	100.00%		L0PA12              	100.00%
Bootstrap support for Q9HWF6 as seed ortholog is 100%.
Bootstrap support for L0PA12 as seed ortholog is 100%.

Group of orthologs #265. Best score 44 bits
Score difference with first non-orthologous sequence - P.aeruginosa:44 P.jiroveci:44

Q9HUW9              	100.00%		L0P910              	100.00%
Bootstrap support for Q9HUW9 as seed ortholog is 100%.
Bootstrap support for L0P910 as seed ortholog is 100%.

Group of orthologs #266. Best score 43 bits
Score difference with first non-orthologous sequence - P.aeruginosa:43 P.jiroveci:43

Q9HU22              	100.00%		L0P6Q8              	100.00%
Q9I291              	7.16%		L0PD82              	66.07%
Bootstrap support for Q9HU22 as seed ortholog is 100%.
Bootstrap support for L0P6Q8 as seed ortholog is 100%.

Group of orthologs #267. Best score 43 bits
Score difference with first non-orthologous sequence - P.aeruginosa:43 P.jiroveci:43

Q9I0Y4              	100.00%		L0PBZ4              	100.00%
Bootstrap support for Q9I0Y4 as seed ortholog is 100%.
Bootstrap support for L0PBZ4 as seed ortholog is 100%.

Group of orthologs #268. Best score 42 bits
Score difference with first non-orthologous sequence - P.aeruginosa:42 P.jiroveci:42

Q9HZQ2              	100.00%		L0PFP4              	100.00%
Q9HVI5              	12.91%		
Q9HT39              	12.62%		
Q9HT42              	7.66%		
Bootstrap support for Q9HZQ2 as seed ortholog is 100%.
Bootstrap support for L0PFP4 as seed ortholog is 100%.

Group of orthologs #269. Best score 41 bits
Score difference with first non-orthologous sequence - P.aeruginosa:41 P.jiroveci:41

Q9HYU8              	100.00%		L0PDT5              	100.00%
Q9I5R5              	10.80%		
Q9I438              	8.80%		
Bootstrap support for Q9HYU8 as seed ortholog is 100%.
Bootstrap support for L0PDT5 as seed ortholog is 100%.

Group of orthologs #270. Best score 41 bits
Score difference with first non-orthologous sequence - P.aeruginosa:41 P.jiroveci:1

Q9I584              	100.00%		L0P9H6              	100.00%
Bootstrap support for Q9I584 as seed ortholog is 100%.
Bootstrap support for L0P9H6 as seed ortholog is 48%.
Alternative seed ortholog is L0P881 (1 bits away from this cluster)