###################################
1428 groups of orthologs
2463 in-paralogs from O.cuniculus
1508 in-paralogs from P.jiroveci
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3646 bits
Score difference with first non-orthologous sequence - O.cuniculus:3646 P.jiroveci:3646

G1SCK0              	100.00%		L0PCQ0              	100.00%
Bootstrap support for G1SCK0 as seed ortholog is 100%.
Bootstrap support for L0PCQ0 as seed ortholog is 100%.

Group of orthologs #2. Best score 2902 bits
Score difference with first non-orthologous sequence - O.cuniculus:1543 P.jiroveci:2902

G1SCI0              	100.00%		L0PGR1              	100.00%
Bootstrap support for G1SCI0 as seed ortholog is 100%.
Bootstrap support for L0PGR1 as seed ortholog is 100%.

Group of orthologs #3. Best score 2183 bits
Score difference with first non-orthologous sequence - O.cuniculus:2183 P.jiroveci:2183

G1U0U1              	100.00%		L0PEQ1              	100.00%
Bootstrap support for G1U0U1 as seed ortholog is 100%.
Bootstrap support for L0PEQ1 as seed ortholog is 100%.

Group of orthologs #4. Best score 2155 bits
Score difference with first non-orthologous sequence - O.cuniculus:2155 P.jiroveci:2155

G1SY30              	100.00%		L0PHB1              	100.00%
Bootstrap support for G1SY30 as seed ortholog is 100%.
Bootstrap support for L0PHB1 as seed ortholog is 100%.

Group of orthologs #5. Best score 1963 bits
Score difference with first non-orthologous sequence - O.cuniculus:1963 P.jiroveci:1963

G1TTQ1              	100.00%		L0PB90              	100.00%
Bootstrap support for G1TTQ1 as seed ortholog is 100%.
Bootstrap support for L0PB90 as seed ortholog is 100%.

Group of orthologs #6. Best score 1840 bits
Score difference with first non-orthologous sequence - O.cuniculus:1840 P.jiroveci:1840

G1T7I3              	100.00%		L0PGI2              	100.00%
G1ST24              	54.39%		
Bootstrap support for G1T7I3 as seed ortholog is 100%.
Bootstrap support for L0PGI2 as seed ortholog is 100%.

Group of orthologs #7. Best score 1825 bits
Score difference with first non-orthologous sequence - O.cuniculus:1825 P.jiroveci:1825

G1TBL6              	100.00%		L0PBF5              	100.00%
G1SF26              	67.73%		
Bootstrap support for G1TBL6 as seed ortholog is 100%.
Bootstrap support for L0PBF5 as seed ortholog is 100%.

Group of orthologs #8. Best score 1751 bits
Score difference with first non-orthologous sequence - O.cuniculus:1751 P.jiroveci:1751

G1SM24              	100.00%		L0PEL4              	100.00%
Bootstrap support for G1SM24 as seed ortholog is 100%.
Bootstrap support for L0PEL4 as seed ortholog is 100%.

Group of orthologs #9. Best score 1727 bits
Score difference with first non-orthologous sequence - O.cuniculus:542 P.jiroveci:1727

G1TCT3              	100.00%		L0P7C3              	100.00%
Bootstrap support for G1TCT3 as seed ortholog is 100%.
Bootstrap support for L0P7C3 as seed ortholog is 100%.

Group of orthologs #10. Best score 1692 bits
Score difference with first non-orthologous sequence - O.cuniculus:1692 P.jiroveci:1692

G1TED3              	100.00%		L0PGJ4              	100.00%
Bootstrap support for G1TED3 as seed ortholog is 100%.
Bootstrap support for L0PGJ4 as seed ortholog is 100%.

Group of orthologs #11. Best score 1587 bits
Score difference with first non-orthologous sequence - O.cuniculus:1587 P.jiroveci:1587

G1U864              	100.00%		L0PFL5              	100.00%
Bootstrap support for G1U864 as seed ortholog is 100%.
Bootstrap support for L0PFL5 as seed ortholog is 100%.

Group of orthologs #12. Best score 1478 bits
Score difference with first non-orthologous sequence - O.cuniculus:1478 P.jiroveci:1478

G1SIA3              	100.00%		L0PD06              	100.00%
Bootstrap support for G1SIA3 as seed ortholog is 100%.
Bootstrap support for L0PD06 as seed ortholog is 100%.

Group of orthologs #13. Best score 1420 bits
Score difference with first non-orthologous sequence - O.cuniculus:687 P.jiroveci:1420

G1SEA1              	100.00%		L0PG77              	100.00%
Bootstrap support for G1SEA1 as seed ortholog is 100%.
Bootstrap support for L0PG77 as seed ortholog is 100%.

Group of orthologs #14. Best score 1337 bits
Score difference with first non-orthologous sequence - O.cuniculus:1337 P.jiroveci:1337

G1T3C7              	100.00%		L0PB43              	100.00%
Bootstrap support for G1T3C7 as seed ortholog is 100%.
Bootstrap support for L0PB43 as seed ortholog is 100%.

Group of orthologs #15. Best score 1323 bits
Score difference with first non-orthologous sequence - O.cuniculus:1323 P.jiroveci:1323

G1T3Y2              	100.00%		L0PG53              	100.00%
Bootstrap support for G1T3Y2 as seed ortholog is 100%.
Bootstrap support for L0PG53 as seed ortholog is 100%.

Group of orthologs #16. Best score 1255 bits
Score difference with first non-orthologous sequence - O.cuniculus:1255 P.jiroveci:1255

G1SL60              	100.00%		L0PCG8              	100.00%
Bootstrap support for G1SL60 as seed ortholog is 100%.
Bootstrap support for L0PCG8 as seed ortholog is 100%.

Group of orthologs #17. Best score 1225 bits
Score difference with first non-orthologous sequence - O.cuniculus:1159 P.jiroveci:1225

G1SMY6              	100.00%		L0PFU4              	100.00%
Bootstrap support for G1SMY6 as seed ortholog is 100%.
Bootstrap support for L0PFU4 as seed ortholog is 100%.

Group of orthologs #18. Best score 1218 bits
Score difference with first non-orthologous sequence - O.cuniculus:1218 P.jiroveci:1218

G1SIE2              	100.00%		L0P818              	100.00%
G1SDX3              	44.68%		
Bootstrap support for G1SIE2 as seed ortholog is 100%.
Bootstrap support for L0P818 as seed ortholog is 100%.

Group of orthologs #19. Best score 1191 bits
Score difference with first non-orthologous sequence - O.cuniculus:1191 P.jiroveci:1191

G1T5A0              	100.00%		L0PBY6              	100.00%
Bootstrap support for G1T5A0 as seed ortholog is 100%.
Bootstrap support for L0PBY6 as seed ortholog is 100%.

Group of orthologs #20. Best score 1183 bits
Score difference with first non-orthologous sequence - O.cuniculus:601 P.jiroveci:1183

G1SLV3              	100.00%		L0PEW0              	100.00%
Bootstrap support for G1SLV3 as seed ortholog is 100%.
Bootstrap support for L0PEW0 as seed ortholog is 100%.

Group of orthologs #21. Best score 1165 bits
Score difference with first non-orthologous sequence - O.cuniculus:1165 P.jiroveci:1165

G1T7I4              	100.00%		L0PCR2              	100.00%
Bootstrap support for G1T7I4 as seed ortholog is 100%.
Bootstrap support for L0PCR2 as seed ortholog is 100%.

Group of orthologs #22. Best score 1156 bits
Score difference with first non-orthologous sequence - O.cuniculus:773 P.jiroveci:1156

G1THM9              	100.00%		L0PBE4              	100.00%
Bootstrap support for G1THM9 as seed ortholog is 100%.
Bootstrap support for L0PBE4 as seed ortholog is 100%.

Group of orthologs #23. Best score 1081 bits
Score difference with first non-orthologous sequence - O.cuniculus:779 P.jiroveci:574

G1SWH1              	100.00%		L0PB13              	100.00%
Bootstrap support for G1SWH1 as seed ortholog is 100%.
Bootstrap support for L0PB13 as seed ortholog is 100%.

Group of orthologs #24. Best score 1074 bits
Score difference with first non-orthologous sequence - O.cuniculus:370 P.jiroveci:1074

Q29504              	100.00%		L0PCK0              	100.00%
                    	       		L0P7U1              	99.05%
Bootstrap support for Q29504 as seed ortholog is 100%.
Bootstrap support for L0PCK0 as seed ortholog is 100%.

Group of orthologs #25. Best score 1064 bits
Score difference with first non-orthologous sequence - O.cuniculus:661 P.jiroveci:1064

G1TF02              	100.00%		L0PG21              	100.00%
G1SEM2              	61.71%		
Bootstrap support for G1TF02 as seed ortholog is 100%.
Bootstrap support for L0PG21 as seed ortholog is 100%.

Group of orthologs #26. Best score 1033 bits
Score difference with first non-orthologous sequence - O.cuniculus:513 P.jiroveci:518

G1SGY7              	100.00%		L0PAJ7              	100.00%
Bootstrap support for G1SGY7 as seed ortholog is 100%.
Bootstrap support for L0PAJ7 as seed ortholog is 100%.

Group of orthologs #27. Best score 1003 bits
Score difference with first non-orthologous sequence - O.cuniculus:1003 P.jiroveci:1003

G1SL36              	100.00%		L0P7P6              	100.00%
Bootstrap support for G1SL36 as seed ortholog is 100%.
Bootstrap support for L0P7P6 as seed ortholog is 100%.

Group of orthologs #28. Best score 981 bits
Score difference with first non-orthologous sequence - O.cuniculus:597 P.jiroveci:981

G1SQ88              	100.00%		L0P9P7              	100.00%
Bootstrap support for G1SQ88 as seed ortholog is 100%.
Bootstrap support for L0P9P7 as seed ortholog is 100%.

Group of orthologs #29. Best score 976 bits
Score difference with first non-orthologous sequence - O.cuniculus:976 P.jiroveci:429

G1SUA9              	100.00%		L0P8X7              	100.00%
Bootstrap support for G1SUA9 as seed ortholog is 100%.
Bootstrap support for L0P8X7 as seed ortholog is 100%.

Group of orthologs #30. Best score 974 bits
Score difference with first non-orthologous sequence - O.cuniculus:974 P.jiroveci:974

G1SZA8              	100.00%		L0P9F0              	100.00%
Bootstrap support for G1SZA8 as seed ortholog is 100%.
Bootstrap support for L0P9F0 as seed ortholog is 100%.

Group of orthologs #31. Best score 962 bits
Score difference with first non-orthologous sequence - O.cuniculus:158 P.jiroveci:749

G1T9M9              	100.00%		L0PEK6              	100.00%
G1T1V9              	42.09%		
G1TRC0              	30.06%		
G1SUX8              	29.43%		
Bootstrap support for G1T9M9 as seed ortholog is 99%.
Bootstrap support for L0PEK6 as seed ortholog is 100%.

Group of orthologs #32. Best score 959 bits
Score difference with first non-orthologous sequence - O.cuniculus:246 P.jiroveci:889

G1T4V5              	100.00%		L0PG61              	100.00%
G1T900              	47.35%		
G1TVK5              	9.09%		
Bootstrap support for G1T4V5 as seed ortholog is 99%.
Bootstrap support for L0PG61 as seed ortholog is 100%.

Group of orthologs #33. Best score 957 bits
Score difference with first non-orthologous sequence - O.cuniculus:957 P.jiroveci:957

G1TA15              	100.00%		L0P915              	100.00%
Bootstrap support for G1TA15 as seed ortholog is 100%.
Bootstrap support for L0P915 as seed ortholog is 100%.

Group of orthologs #34. Best score 951 bits
Score difference with first non-orthologous sequence - O.cuniculus:775 P.jiroveci:951

G1TUX2              	100.00%		L0PFN4              	100.00%
Bootstrap support for G1TUX2 as seed ortholog is 100%.
Bootstrap support for L0PFN4 as seed ortholog is 100%.

Group of orthologs #35. Best score 946 bits
Score difference with first non-orthologous sequence - O.cuniculus:481 P.jiroveci:946

G1TC33              	100.00%		L0PDI4              	100.00%
P35748              	68.12%		
G1SL68              	66.83%		
G1SYW9              	15.41%		
G1SJQ4              	14.87%		
G1TKS9              	14.59%		
Q28641              	14.49%		
G1U9R3              	14.29%		
G1U3B4              	14.15%		
G1SH73              	14.05%		
G1SQI1              	9.38%		
Bootstrap support for G1TC33 as seed ortholog is 100%.
Bootstrap support for L0PDI4 as seed ortholog is 100%.

Group of orthologs #36. Best score 946 bits
Score difference with first non-orthologous sequence - O.cuniculus:281 P.jiroveci:344

G1TWP4              	100.00%		L0PDB3              	100.00%
Bootstrap support for G1TWP4 as seed ortholog is 99%.
Bootstrap support for L0PDB3 as seed ortholog is 100%.

Group of orthologs #37. Best score 927 bits
Score difference with first non-orthologous sequence - O.cuniculus:927 P.jiroveci:927

G1SET0              	100.00%		L0P7V0              	100.00%
Bootstrap support for G1SET0 as seed ortholog is 100%.
Bootstrap support for L0P7V0 as seed ortholog is 100%.

Group of orthologs #38. Best score 911 bits
Score difference with first non-orthologous sequence - O.cuniculus:400 P.jiroveci:380

G1SIW1              	100.00%		L0PFC8              	100.00%
Bootstrap support for G1SIW1 as seed ortholog is 100%.
Bootstrap support for L0PFC8 as seed ortholog is 100%.

Group of orthologs #39. Best score 897 bits
Score difference with first non-orthologous sequence - O.cuniculus:897 P.jiroveci:897

G1SSX2              	100.00%		L0PAK7              	100.00%
                    	       		L0P8F2              	66.77%
Bootstrap support for G1SSX2 as seed ortholog is 100%.
Bootstrap support for L0PAK7 as seed ortholog is 100%.

Group of orthologs #40. Best score 893 bits
Score difference with first non-orthologous sequence - O.cuniculus:893 P.jiroveci:893

P35574              	100.00%		L0PG12              	100.00%
Bootstrap support for P35574 as seed ortholog is 100%.
Bootstrap support for L0PG12 as seed ortholog is 100%.

Group of orthologs #41. Best score 886 bits
Score difference with first non-orthologous sequence - O.cuniculus:886 P.jiroveci:886

G1SG47              	100.00%		L0PEL5              	100.00%
G1SQS6              	57.33%		L0PGC2              	46.20%
Bootstrap support for G1SG47 as seed ortholog is 100%.
Bootstrap support for L0PEL5 as seed ortholog is 100%.

Group of orthologs #42. Best score 883 bits
Score difference with first non-orthologous sequence - O.cuniculus:267 P.jiroveci:883

P30946              	100.00%		L0PAW9              	100.00%
G1T8Q6              	50.51%		L0PBZ0              	71.31%
G1SUV5              	40.81%		
G1T464              	31.31%		
Bootstrap support for P30946 as seed ortholog is 100%.
Bootstrap support for L0PAW9 as seed ortholog is 100%.

Group of orthologs #43. Best score 881 bits
Score difference with first non-orthologous sequence - O.cuniculus:881 P.jiroveci:881

G1SVF2              	100.00%		L0PCC4              	100.00%
Bootstrap support for G1SVF2 as seed ortholog is 100%.
Bootstrap support for L0PCC4 as seed ortholog is 100%.

Group of orthologs #44. Best score 860 bits
Score difference with first non-orthologous sequence - O.cuniculus:505 P.jiroveci:558

P20647              	100.00%		L0PCW9              	100.00%
P04191              	68.11%		
G1T853              	56.97%		
Bootstrap support for P20647 as seed ortholog is 100%.
Bootstrap support for L0PCW9 as seed ortholog is 100%.

Group of orthologs #45. Best score 849 bits
Score difference with first non-orthologous sequence - O.cuniculus:849 P.jiroveci:849

G1T6T8              	100.00%		L0PAN4              	100.00%
Bootstrap support for G1T6T8 as seed ortholog is 100%.
Bootstrap support for L0PAN4 as seed ortholog is 100%.

Group of orthologs #46. Best score 848 bits
Score difference with first non-orthologous sequence - O.cuniculus:774 P.jiroveci:848

G1TPH5              	100.00%		L0PEU6              	100.00%
G1TAG2              	63.53%		
Bootstrap support for G1TPH5 as seed ortholog is 100%.
Bootstrap support for L0PEU6 as seed ortholog is 100%.

Group of orthologs #47. Best score 846 bits
Score difference with first non-orthologous sequence - O.cuniculus:355 P.jiroveci:694

G1TRT8              	100.00%		L0PFS2              	100.00%
Bootstrap support for G1TRT8 as seed ortholog is 100%.
Bootstrap support for L0PFS2 as seed ortholog is 100%.

Group of orthologs #48. Best score 845 bits
Score difference with first non-orthologous sequence - O.cuniculus:845 P.jiroveci:845

G1SG72              	100.00%		L0PDF1              	100.00%
Bootstrap support for G1SG72 as seed ortholog is 100%.
Bootstrap support for L0PDF1 as seed ortholog is 100%.

Group of orthologs #49. Best score 840 bits
Score difference with first non-orthologous sequence - O.cuniculus:598 P.jiroveci:840

G1SZY1              	100.00%		L0PGL4              	100.00%
                    	       		L0P7Q7              	24.22%
Bootstrap support for G1SZY1 as seed ortholog is 100%.
Bootstrap support for L0PGL4 as seed ortholog is 100%.

Group of orthologs #50. Best score 838 bits
Score difference with first non-orthologous sequence - O.cuniculus:838 P.jiroveci:838

G1SJU2              	100.00%		L0PE96              	100.00%
Bootstrap support for G1SJU2 as seed ortholog is 100%.
Bootstrap support for L0PE96 as seed ortholog is 100%.

Group of orthologs #51. Best score 836 bits
Score difference with first non-orthologous sequence - O.cuniculus:249 P.jiroveci:836

G1SHI9              	100.00%		L0PGR4              	100.00%
G1T650              	59.61%		L0PFQ2              	92.16%
Bootstrap support for G1SHI9 as seed ortholog is 99%.
Bootstrap support for L0PGR4 as seed ortholog is 100%.

Group of orthologs #52. Best score 823 bits
Score difference with first non-orthologous sequence - O.cuniculus:170 P.jiroveci:634

G1U7L4              	100.00%		L0PFV0              	100.00%
Bootstrap support for G1U7L4 as seed ortholog is 99%.
Bootstrap support for L0PFV0 as seed ortholog is 100%.

Group of orthologs #53. Best score 811 bits
Score difference with first non-orthologous sequence - O.cuniculus:655 P.jiroveci:711

G1T0Q6              	100.00%		L0PC93              	100.00%
Bootstrap support for G1T0Q6 as seed ortholog is 100%.
Bootstrap support for L0PC93 as seed ortholog is 100%.

Group of orthologs #54. Best score 807 bits
Score difference with first non-orthologous sequence - O.cuniculus:807 P.jiroveci:807

G1SCG5              	100.00%		L0PFF9              	100.00%
Bootstrap support for G1SCG5 as seed ortholog is 100%.
Bootstrap support for L0PFF9 as seed ortholog is 100%.

Group of orthologs #55. Best score 799 bits
Score difference with first non-orthologous sequence - O.cuniculus:200 P.jiroveci:799

G1SW24              	100.00%		L0PDQ4              	100.00%
Bootstrap support for G1SW24 as seed ortholog is 99%.
Bootstrap support for L0PDQ4 as seed ortholog is 100%.

Group of orthologs #56. Best score 797 bits
Score difference with first non-orthologous sequence - O.cuniculus:797 P.jiroveci:797

G1SPJ5              	100.00%		L0PC43              	100.00%
                    	       		L0PCW3              	45.75%
Bootstrap support for G1SPJ5 as seed ortholog is 100%.
Bootstrap support for L0PC43 as seed ortholog is 100%.

Group of orthologs #57. Best score 797 bits
Score difference with first non-orthologous sequence - O.cuniculus:797 P.jiroveci:797

G1SFC6              	100.00%		L0PC54              	100.00%
Bootstrap support for G1SFC6 as seed ortholog is 100%.
Bootstrap support for L0PC54 as seed ortholog is 100%.

Group of orthologs #58. Best score 791 bits
Score difference with first non-orthologous sequence - O.cuniculus:791 P.jiroveci:791

G1SH51              	100.00%		L0P7X5              	100.00%
Bootstrap support for G1SH51 as seed ortholog is 100%.
Bootstrap support for L0P7X5 as seed ortholog is 100%.

Group of orthologs #59. Best score 791 bits
Score difference with first non-orthologous sequence - O.cuniculus:791 P.jiroveci:791

G1SRZ8              	100.00%		L0P9W2              	100.00%
Bootstrap support for G1SRZ8 as seed ortholog is 100%.
Bootstrap support for L0P9W2 as seed ortholog is 100%.

Group of orthologs #60. Best score 785 bits
Score difference with first non-orthologous sequence - O.cuniculus:785 P.jiroveci:785

G1T4Z2              	100.00%		L0PAV3              	100.00%
Bootstrap support for G1T4Z2 as seed ortholog is 100%.
Bootstrap support for L0PAV3 as seed ortholog is 100%.

Group of orthologs #61. Best score 781 bits
Score difference with first non-orthologous sequence - O.cuniculus:249 P.jiroveci:781

P68105              	100.00%		L0PBA5              	100.00%
G1U6W1              	91.33%		
Q71V39              	60.00%		
Bootstrap support for P68105 as seed ortholog is 100%.
Bootstrap support for L0PBA5 as seed ortholog is 100%.

Group of orthologs #62. Best score 775 bits
Score difference with first non-orthologous sequence - O.cuniculus:775 P.jiroveci:622

G1TCK9              	100.00%		L0PBQ6              	100.00%
Bootstrap support for G1TCK9 as seed ortholog is 100%.
Bootstrap support for L0PBQ6 as seed ortholog is 100%.

Group of orthologs #63. Best score 770 bits
Score difference with first non-orthologous sequence - O.cuniculus:686 P.jiroveci:770

G1SDA4              	100.00%		L0P9R9              	100.00%
Bootstrap support for G1SDA4 as seed ortholog is 100%.
Bootstrap support for L0P9R9 as seed ortholog is 100%.

Group of orthologs #64. Best score 769 bits
Score difference with first non-orthologous sequence - O.cuniculus:669 P.jiroveci:769

G1T9K0              	100.00%		L0P7V1              	100.00%
Bootstrap support for G1T9K0 as seed ortholog is 100%.
Bootstrap support for L0P7V1 as seed ortholog is 100%.

Group of orthologs #65. Best score 767 bits
Score difference with first non-orthologous sequence - O.cuniculus:291 P.jiroveci:767

G1STJ8              	100.00%		L0PGU1              	100.00%
G1TZ77              	49.76%		
G1STI8              	33.93%		
Bootstrap support for G1STJ8 as seed ortholog is 99%.
Bootstrap support for L0PGU1 as seed ortholog is 100%.

Group of orthologs #66. Best score 766 bits
Score difference with first non-orthologous sequence - O.cuniculus:766 P.jiroveci:766

G1SGA9              	100.00%		L0P710              	100.00%
Bootstrap support for G1SGA9 as seed ortholog is 100%.
Bootstrap support for L0P710 as seed ortholog is 100%.

Group of orthologs #67. Best score 764 bits
Score difference with first non-orthologous sequence - O.cuniculus:545 P.jiroveci:764

G1TQS0              	100.00%		L0PD55              	100.00%
Bootstrap support for G1TQS0 as seed ortholog is 100%.
Bootstrap support for L0PD55 as seed ortholog is 100%.

Group of orthologs #68. Best score 762 bits
Score difference with first non-orthologous sequence - O.cuniculus:43 P.jiroveci:762

G1SQX3              	100.00%		L0PAC9              	100.00%
G1SW08              	24.65%		
G1SRR5              	22.81%		
Bootstrap support for G1SQX3 as seed ortholog is 70%.
Alternative seed ortholog is G1SXK9 (43 bits away from this cluster)
Bootstrap support for L0PAC9 as seed ortholog is 100%.

Group of orthologs #69. Best score 759 bits
Score difference with first non-orthologous sequence - O.cuniculus:759 P.jiroveci:759

G1SR29              	100.00%		L0PH89              	100.00%
Bootstrap support for G1SR29 as seed ortholog is 100%.
Bootstrap support for L0PH89 as seed ortholog is 100%.

Group of orthologs #70. Best score 756 bits
Score difference with first non-orthologous sequence - O.cuniculus:184 P.jiroveci:397

G1SDU6              	100.00%		L0P9U5              	100.00%
G1SZW3              	40.30%		
Bootstrap support for G1SDU6 as seed ortholog is 99%.
Bootstrap support for L0P9U5 as seed ortholog is 100%.

Group of orthologs #71. Best score 755 bits
Score difference with first non-orthologous sequence - O.cuniculus:562 P.jiroveci:293

G1SKT4              	100.00%		L0P833              	100.00%
Bootstrap support for G1SKT4 as seed ortholog is 100%.
Bootstrap support for L0P833 as seed ortholog is 100%.

Group of orthologs #72. Best score 749 bits
Score difference with first non-orthologous sequence - O.cuniculus:749 P.jiroveci:749

G1TAI8              	100.00%		L0PA62              	100.00%
Bootstrap support for G1TAI8 as seed ortholog is 100%.
Bootstrap support for L0PA62 as seed ortholog is 100%.

Group of orthologs #73. Best score 745 bits
Score difference with first non-orthologous sequence - O.cuniculus:745 P.jiroveci:745

G1T359              	100.00%		L0P7K0              	100.00%
Bootstrap support for G1T359 as seed ortholog is 100%.
Bootstrap support for L0P7K0 as seed ortholog is 100%.

Group of orthologs #74. Best score 744 bits
Score difference with first non-orthologous sequence - O.cuniculus:412 P.jiroveci:744

G1U8Y7              	100.00%		L0PB83              	100.00%
Bootstrap support for G1U8Y7 as seed ortholog is 100%.
Bootstrap support for L0PB83 as seed ortholog is 100%.

Group of orthologs #75. Best score 743 bits
Score difference with first non-orthologous sequence - O.cuniculus:743 P.jiroveci:743

G1T7W7              	100.00%		L0PFJ0              	100.00%
G1TI10              	11.21%		
Bootstrap support for G1T7W7 as seed ortholog is 100%.
Bootstrap support for L0PFJ0 as seed ortholog is 100%.

Group of orthologs #76. Best score 743 bits
Score difference with first non-orthologous sequence - O.cuniculus:354 P.jiroveci:743

G1SRG3              	100.00%		L0PC37              	100.00%
Bootstrap support for G1SRG3 as seed ortholog is 100%.
Bootstrap support for L0PC37 as seed ortholog is 100%.

Group of orthologs #77. Best score 742 bits
Score difference with first non-orthologous sequence - O.cuniculus:109 P.jiroveci:742

G1T4J4              	100.00%		L0PBR4              	100.00%
G1SY02              	97.04%		
G1U410              	78.70%		
G1SH05              	77.51%		
G1TJC3              	43.20%		
G1U5S4              	41.42%		
Bootstrap support for G1T4J4 as seed ortholog is 99%.
Bootstrap support for L0PBR4 as seed ortholog is 100%.

Group of orthologs #78. Best score 741 bits
Score difference with first non-orthologous sequence - O.cuniculus:741 P.jiroveci:523

G1T8Z5              	100.00%		L0PG27              	100.00%
Bootstrap support for G1T8Z5 as seed ortholog is 100%.
Bootstrap support for L0PG27 as seed ortholog is 100%.

Group of orthologs #79. Best score 737 bits
Score difference with first non-orthologous sequence - O.cuniculus:737 P.jiroveci:737

G1SYP7              	100.00%		L0PAP2              	100.00%
Bootstrap support for G1SYP7 as seed ortholog is 100%.
Bootstrap support for L0PAP2 as seed ortholog is 100%.

Group of orthologs #80. Best score 735 bits
Score difference with first non-orthologous sequence - O.cuniculus:530 P.jiroveci:735

G1TMS5              	100.00%		L0PGA5              	100.00%
Bootstrap support for G1TMS5 as seed ortholog is 100%.
Bootstrap support for L0PGA5 as seed ortholog is 100%.

Group of orthologs #81. Best score 731 bits
Score difference with first non-orthologous sequence - O.cuniculus:731 P.jiroveci:657

G1T0I5              	100.00%		L0PA93              	100.00%
Bootstrap support for G1T0I5 as seed ortholog is 100%.
Bootstrap support for L0PA93 as seed ortholog is 100%.

Group of orthologs #82. Best score 730 bits
Score difference with first non-orthologous sequence - O.cuniculus:240 P.jiroveci:730

G1SLT7              	100.00%		L0PB85              	100.00%
G1SFT5              	42.40%		
Bootstrap support for G1SLT7 as seed ortholog is 99%.
Bootstrap support for L0PB85 as seed ortholog is 100%.

Group of orthologs #83. Best score 730 bits
Score difference with first non-orthologous sequence - O.cuniculus:730 P.jiroveci:730

G1T568              	100.00%		L0PBD7              	100.00%
G1SUT0              	36.67%		
Bootstrap support for G1T568 as seed ortholog is 100%.
Bootstrap support for L0PBD7 as seed ortholog is 100%.

Group of orthologs #84. Best score 728 bits
Score difference with first non-orthologous sequence - O.cuniculus:602 P.jiroveci:614

G1T5N5              	100.00%		L0PBP8              	100.00%
Bootstrap support for G1T5N5 as seed ortholog is 100%.
Bootstrap support for L0PBP8 as seed ortholog is 100%.

Group of orthologs #85. Best score 723 bits
Score difference with first non-orthologous sequence - O.cuniculus:723 P.jiroveci:723

P13834              	100.00%		L0PDF3              	100.00%
G1U9R5              	41.92%		
Bootstrap support for P13834 as seed ortholog is 100%.
Bootstrap support for L0PDF3 as seed ortholog is 100%.

Group of orthologs #86. Best score 723 bits
Score difference with first non-orthologous sequence - O.cuniculus:723 P.jiroveci:723

G1SSA2              	100.00%		L0P773              	100.00%
Bootstrap support for G1SSA2 as seed ortholog is 100%.
Bootstrap support for L0P773 as seed ortholog is 100%.

Group of orthologs #87. Best score 722 bits
Score difference with first non-orthologous sequence - O.cuniculus:722 P.jiroveci:722

G1TBY9              	100.00%		L0PAS8              	100.00%
Bootstrap support for G1TBY9 as seed ortholog is 100%.
Bootstrap support for L0PAS8 as seed ortholog is 100%.

Group of orthologs #88. Best score 720 bits
Score difference with first non-orthologous sequence - O.cuniculus:720 P.jiroveci:720

G1T748              	100.00%		L0PBW3              	100.00%
Bootstrap support for G1T748 as seed ortholog is 100%.
Bootstrap support for L0PBW3 as seed ortholog is 100%.

Group of orthologs #89. Best score 717 bits
Score difference with first non-orthologous sequence - O.cuniculus:717 P.jiroveci:717

G1T9M7              	100.00%		L0PAQ3              	100.00%
P00489              	68.07%		
G1SIB9              	64.65%		
Bootstrap support for G1T9M7 as seed ortholog is 100%.
Bootstrap support for L0PAQ3 as seed ortholog is 100%.

Group of orthologs #90. Best score 716 bits
Score difference with first non-orthologous sequence - O.cuniculus:716 P.jiroveci:716

G1T011              	100.00%		L0PDK6              	100.00%
Bootstrap support for G1T011 as seed ortholog is 100%.
Bootstrap support for L0PDK6 as seed ortholog is 100%.

Group of orthologs #91. Best score 714 bits
Score difference with first non-orthologous sequence - O.cuniculus:714 P.jiroveci:714

G1SKK0              	100.00%		L0PE57              	100.00%
Bootstrap support for G1SKK0 as seed ortholog is 100%.
Bootstrap support for L0PE57 as seed ortholog is 100%.

Group of orthologs #92. Best score 698 bits
Score difference with first non-orthologous sequence - O.cuniculus:436 P.jiroveci:698

G1SLF6              	100.00%		L0PBV5              	100.00%
Bootstrap support for G1SLF6 as seed ortholog is 100%.
Bootstrap support for L0PBV5 as seed ortholog is 100%.

Group of orthologs #93. Best score 694 bits
Score difference with first non-orthologous sequence - O.cuniculus:312 P.jiroveci:694

G1T2U6              	100.00%		L0P7L0              	100.00%
                    	       		L0PCI7              	40.12%
Bootstrap support for G1T2U6 as seed ortholog is 100%.
Bootstrap support for L0P7L0 as seed ortholog is 100%.

Group of orthologs #94. Best score 692 bits
Score difference with first non-orthologous sequence - O.cuniculus:487 P.jiroveci:450

G1T881              	100.00%		L0PBL6              	100.00%
Bootstrap support for G1T881 as seed ortholog is 100%.
Bootstrap support for L0PBL6 as seed ortholog is 100%.

Group of orthologs #95. Best score 690 bits
Score difference with first non-orthologous sequence - O.cuniculus:458 P.jiroveci:690

G1U9S7              	100.00%		L0P945              	100.00%
Bootstrap support for G1U9S7 as seed ortholog is 100%.
Bootstrap support for L0P945 as seed ortholog is 100%.

Group of orthologs #96. Best score 688 bits
Score difference with first non-orthologous sequence - O.cuniculus:688 P.jiroveci:688

G1TE39              	100.00%		L0PBY5              	100.00%
G1TB05              	15.69%		
Bootstrap support for G1TE39 as seed ortholog is 100%.
Bootstrap support for L0PBY5 as seed ortholog is 100%.

Group of orthologs #97. Best score 684 bits
Score difference with first non-orthologous sequence - O.cuniculus:321 P.jiroveci:532

P29751              	100.00%		L0PA91              	100.00%
P62740              	50.00%		
G1STB6              	47.30%		
G1SK59              	45.95%		
P68135              	44.59%		
G1SPU6              	44.59%		
G1SDT0              	35.14%		
G1SL06              	29.73%		
Bootstrap support for P29751 as seed ortholog is 100%.
Bootstrap support for L0PA91 as seed ortholog is 100%.

Group of orthologs #98. Best score 682 bits
Score difference with first non-orthologous sequence - O.cuniculus:468 P.jiroveci:682

G1SCN8              	100.00%		L0P976              	100.00%
Bootstrap support for G1SCN8 as seed ortholog is 100%.
Bootstrap support for L0P976 as seed ortholog is 100%.

Group of orthologs #99. Best score 678 bits
Score difference with first non-orthologous sequence - O.cuniculus:308 P.jiroveci:549

G1TBV6              	100.00%		L0PIF0              	100.00%
G1TA99              	16.98%		
G1T1C8              	11.21%		
Bootstrap support for G1TBV6 as seed ortholog is 99%.
Bootstrap support for L0PIF0 as seed ortholog is 100%.

Group of orthologs #100. Best score 675 bits
Score difference with first non-orthologous sequence - O.cuniculus:675 P.jiroveci:675

G1U3Q0              	100.00%		L0PC79              	100.00%
G1T5M6              	35.38%		
G1TAT1              	19.01%		
Bootstrap support for G1U3Q0 as seed ortholog is 100%.
Bootstrap support for L0PC79 as seed ortholog is 100%.

Group of orthologs #101. Best score 674 bits
Score difference with first non-orthologous sequence - O.cuniculus:402 P.jiroveci:674

G1SX90              	100.00%		L0PBW7              	100.00%
Bootstrap support for G1SX90 as seed ortholog is 100%.
Bootstrap support for L0PBW7 as seed ortholog is 100%.

Group of orthologs #102. Best score 673 bits
Score difference with first non-orthologous sequence - O.cuniculus:579 P.jiroveci:559

G1STC6              	100.00%		L0PA41              	100.00%
Bootstrap support for G1STC6 as seed ortholog is 100%.
Bootstrap support for L0PA41 as seed ortholog is 100%.

Group of orthologs #103. Best score 672 bits
Score difference with first non-orthologous sequence - O.cuniculus:400 P.jiroveci:578

G1SFD8              	100.00%		L0PCT0              	100.00%
Bootstrap support for G1SFD8 as seed ortholog is 100%.
Bootstrap support for L0PCT0 as seed ortholog is 100%.

Group of orthologs #104. Best score 671 bits
Score difference with first non-orthologous sequence - O.cuniculus:464 P.jiroveci:671

G1U9T1              	100.00%		L0PG45              	100.00%
Bootstrap support for G1U9T1 as seed ortholog is 100%.
Bootstrap support for L0PG45 as seed ortholog is 100%.

Group of orthologs #105. Best score 670 bits
Score difference with first non-orthologous sequence - O.cuniculus:183 P.jiroveci:170

G1SX66              	100.00%		L0P9U6              	100.00%
Bootstrap support for G1SX66 as seed ortholog is 99%.
Bootstrap support for L0P9U6 as seed ortholog is 99%.

Group of orthologs #106. Best score 667 bits
Score difference with first non-orthologous sequence - O.cuniculus:405 P.jiroveci:667

G1SZQ1              	100.00%		L0PG32              	100.00%
Bootstrap support for G1SZQ1 as seed ortholog is 100%.
Bootstrap support for L0PG32 as seed ortholog is 100%.

Group of orthologs #107. Best score 666 bits
Score difference with first non-orthologous sequence - O.cuniculus:666 P.jiroveci:666

G1SI74              	100.00%		L0PC65              	100.00%
G1TBC8              	32.76%		
Bootstrap support for G1SI74 as seed ortholog is 100%.
Bootstrap support for L0PC65 as seed ortholog is 100%.

Group of orthologs #108. Best score 665 bits
Score difference with first non-orthologous sequence - O.cuniculus:450 P.jiroveci:665

G1TDC3              	100.00%		L0PG19              	100.00%
G1U5F4              	45.77%		
G1T0T2              	22.59%		
Bootstrap support for G1TDC3 as seed ortholog is 100%.
Bootstrap support for L0PG19 as seed ortholog is 100%.

Group of orthologs #109. Best score 663 bits
Score difference with first non-orthologous sequence - O.cuniculus:479 P.jiroveci:663

B6V9S9              	100.00%		L0PER6              	100.00%
Bootstrap support for B6V9S9 as seed ortholog is 100%.
Bootstrap support for L0PER6 as seed ortholog is 100%.

Group of orthologs #110. Best score 661 bits
Score difference with first non-orthologous sequence - O.cuniculus:401 P.jiroveci:535

G1SNH0              	100.00%		L0PE26              	100.00%
Bootstrap support for G1SNH0 as seed ortholog is 100%.
Bootstrap support for L0PE26 as seed ortholog is 100%.

Group of orthologs #111. Best score 661 bits
Score difference with first non-orthologous sequence - O.cuniculus:661 P.jiroveci:367

G1T9P6              	100.00%		L0PFG7              	100.00%
Bootstrap support for G1T9P6 as seed ortholog is 100%.
Bootstrap support for L0PFG7 as seed ortholog is 100%.

Group of orthologs #112. Best score 658 bits
Score difference with first non-orthologous sequence - O.cuniculus:604 P.jiroveci:658

G1SQ22              	100.00%		L0P8M6              	100.00%
G1U541              	43.73%		
Bootstrap support for G1SQ22 as seed ortholog is 100%.
Bootstrap support for L0P8M6 as seed ortholog is 100%.

Group of orthologs #113. Best score 657 bits
Score difference with first non-orthologous sequence - O.cuniculus:214 P.jiroveci:657

G1SHS4              	100.00%		L0PBN5              	100.00%
Bootstrap support for G1SHS4 as seed ortholog is 99%.
Bootstrap support for L0PBN5 as seed ortholog is 100%.

Group of orthologs #114. Best score 656 bits
Score difference with first non-orthologous sequence - O.cuniculus:656 P.jiroveci:656

G1T9F3              	100.00%		L0PDI6              	100.00%
Bootstrap support for G1T9F3 as seed ortholog is 100%.
Bootstrap support for L0PDI6 as seed ortholog is 100%.

Group of orthologs #115. Best score 645 bits
Score difference with first non-orthologous sequence - O.cuniculus:645 P.jiroveci:645

P47859              	100.00%		L0PEQ8              	100.00%
P00511              	48.45%		
Bootstrap support for P47859 as seed ortholog is 100%.
Bootstrap support for L0PEQ8 as seed ortholog is 100%.

Group of orthologs #116. Best score 640 bits
Score difference with first non-orthologous sequence - O.cuniculus:640 P.jiroveci:640

G1SKP2              	100.00%		L0PDG3              	100.00%
G1SV83              	73.07%		
Bootstrap support for G1SKP2 as seed ortholog is 100%.
Bootstrap support for L0PDG3 as seed ortholog is 100%.

Group of orthologs #117. Best score 640 bits
Score difference with first non-orthologous sequence - O.cuniculus:505 P.jiroveci:640

O77622              	100.00%		L0PGS4              	100.00%
G1T341              	66.67%		
Bootstrap support for O77622 as seed ortholog is 100%.
Bootstrap support for L0PGS4 as seed ortholog is 100%.

Group of orthologs #118. Best score 638 bits
Score difference with first non-orthologous sequence - O.cuniculus:638 P.jiroveci:638

G1SGG6              	100.00%		L0P7V2              	100.00%
Bootstrap support for G1SGG6 as seed ortholog is 100%.
Bootstrap support for L0P7V2 as seed ortholog is 100%.

Group of orthologs #119. Best score 636 bits
Score difference with first non-orthologous sequence - O.cuniculus:366 P.jiroveci:636

G1SDZ2              	100.00%		L0P8Y6              	100.00%
Bootstrap support for G1SDZ2 as seed ortholog is 100%.
Bootstrap support for L0P8Y6 as seed ortholog is 100%.

Group of orthologs #120. Best score 633 bits
Score difference with first non-orthologous sequence - O.cuniculus:343 P.jiroveci:633

G1SFZ1              	100.00%		L0PD31              	100.00%
Bootstrap support for G1SFZ1 as seed ortholog is 100%.
Bootstrap support for L0PD31 as seed ortholog is 100%.

Group of orthologs #121. Best score 631 bits
Score difference with first non-orthologous sequence - O.cuniculus:226 P.jiroveci:631

G1TFW1              	100.00%		L0PAG9              	100.00%
Bootstrap support for G1TFW1 as seed ortholog is 99%.
Bootstrap support for L0PAG9 as seed ortholog is 100%.

Group of orthologs #122. Best score 628 bits
Score difference with first non-orthologous sequence - O.cuniculus:328 P.jiroveci:314

G1TMQ8              	100.00%		L0P8L4              	100.00%
Bootstrap support for G1TMQ8 as seed ortholog is 100%.
Bootstrap support for L0P8L4 as seed ortholog is 99%.

Group of orthologs #123. Best score 628 bits
Score difference with first non-orthologous sequence - O.cuniculus:484 P.jiroveci:488

G1TRL5              	100.00%		L0PEP7              	100.00%
Bootstrap support for G1TRL5 as seed ortholog is 100%.
Bootstrap support for L0PEP7 as seed ortholog is 100%.

Group of orthologs #124. Best score 620 bits
Score difference with first non-orthologous sequence - O.cuniculus:620 P.jiroveci:620

G1T024              	100.00%		L0PF80              	100.00%
Bootstrap support for G1T024 as seed ortholog is 100%.
Bootstrap support for L0PF80 as seed ortholog is 100%.

Group of orthologs #125. Best score 619 bits
Score difference with first non-orthologous sequence - O.cuniculus:454 P.jiroveci:619

G1SPE4              	100.00%		L0PGL8              	100.00%
Bootstrap support for G1SPE4 as seed ortholog is 100%.
Bootstrap support for L0PGL8 as seed ortholog is 100%.

Group of orthologs #126. Best score 619 bits
Score difference with first non-orthologous sequence - O.cuniculus:619 P.jiroveci:619

G1SXW0              	100.00%		L0P9S1              	100.00%
Bootstrap support for G1SXW0 as seed ortholog is 100%.
Bootstrap support for L0P9S1 as seed ortholog is 100%.

Group of orthologs #127. Best score 618 bits
Score difference with first non-orthologous sequence - O.cuniculus:177 P.jiroveci:618

G1SVH0              	100.00%		L0PDJ1              	100.00%
Bootstrap support for G1SVH0 as seed ortholog is 100%.
Bootstrap support for L0PDJ1 as seed ortholog is 100%.

Group of orthologs #128. Best score 616 bits
Score difference with first non-orthologous sequence - O.cuniculus:530 P.jiroveci:616

G1SNZ3              	100.00%		L0PD32              	100.00%
                    	       		L0PD26              	93.69%
Bootstrap support for G1SNZ3 as seed ortholog is 100%.
Bootstrap support for L0PD32 as seed ortholog is 100%.

Group of orthologs #129. Best score 616 bits
Score difference with first non-orthologous sequence - O.cuniculus:255 P.jiroveci:499

G1U642              	100.00%		L0P8E7              	100.00%
Bootstrap support for G1U642 as seed ortholog is 100%.
Bootstrap support for L0P8E7 as seed ortholog is 100%.

Group of orthologs #130. Best score 616 bits
Score difference with first non-orthologous sequence - O.cuniculus:616 P.jiroveci:541

G1U8F0              	100.00%		L0P8G2              	100.00%
Bootstrap support for G1U8F0 as seed ortholog is 100%.
Bootstrap support for L0P8G2 as seed ortholog is 100%.

Group of orthologs #131. Best score 612 bits
Score difference with first non-orthologous sequence - O.cuniculus:612 P.jiroveci:612

G1SJW8              	100.00%		L0PAX4              	100.00%
Bootstrap support for G1SJW8 as seed ortholog is 100%.
Bootstrap support for L0PAX4 as seed ortholog is 100%.

Group of orthologs #132. Best score 612 bits
Score difference with first non-orthologous sequence - O.cuniculus:612 P.jiroveci:612

G1T3Y8              	100.00%		L0PDM6              	100.00%
Bootstrap support for G1T3Y8 as seed ortholog is 100%.
Bootstrap support for L0PDM6 as seed ortholog is 100%.

Group of orthologs #133. Best score 612 bits
Score difference with first non-orthologous sequence - O.cuniculus:612 P.jiroveci:612

G1U483              	100.00%		L0PDD5              	100.00%
Bootstrap support for G1U483 as seed ortholog is 100%.
Bootstrap support for L0PDD5 as seed ortholog is 100%.

Group of orthologs #134. Best score 608 bits
Score difference with first non-orthologous sequence - O.cuniculus:608 P.jiroveci:608

G1SES9              	100.00%		L0PBN0              	100.00%
Bootstrap support for G1SES9 as seed ortholog is 100%.
Bootstrap support for L0PBN0 as seed ortholog is 100%.

Group of orthologs #135. Best score 605 bits
Score difference with first non-orthologous sequence - O.cuniculus:402 P.jiroveci:497

G1SLS3              	100.00%		L0PGT9              	100.00%
G1STN3              	30.65%		
Bootstrap support for G1SLS3 as seed ortholog is 100%.
Bootstrap support for L0PGT9 as seed ortholog is 100%.

Group of orthologs #136. Best score 605 bits
Score difference with first non-orthologous sequence - O.cuniculus:357 P.jiroveci:428

G1TQ40              	100.00%		L0P850              	100.00%
Bootstrap support for G1TQ40 as seed ortholog is 99%.
Bootstrap support for L0P850 as seed ortholog is 100%.

Group of orthologs #137. Best score 602 bits
Score difference with first non-orthologous sequence - O.cuniculus:354 P.jiroveci:602

G1SFQ7              	100.00%		L0PAR0              	100.00%
Bootstrap support for G1SFQ7 as seed ortholog is 100%.
Bootstrap support for L0PAR0 as seed ortholog is 100%.

Group of orthologs #138. Best score 601 bits
Score difference with first non-orthologous sequence - O.cuniculus:473 P.jiroveci:601

G1TEA8              	100.00%		L0P7N3              	100.00%
G1SIV0              	67.31%		
Bootstrap support for G1TEA8 as seed ortholog is 100%.
Bootstrap support for L0P7N3 as seed ortholog is 100%.

Group of orthologs #139. Best score 597 bits
Score difference with first non-orthologous sequence - O.cuniculus:388 P.jiroveci:340

G1SPT2              	100.00%		L0P853              	100.00%
                    	       		L0P8M8              	55.04%
Bootstrap support for G1SPT2 as seed ortholog is 100%.
Bootstrap support for L0P853 as seed ortholog is 100%.

Group of orthologs #140. Best score 597 bits
Score difference with first non-orthologous sequence - O.cuniculus:597 P.jiroveci:597

G1T5J9              	100.00%		L0PB96              	100.00%
Bootstrap support for G1T5J9 as seed ortholog is 100%.
Bootstrap support for L0PB96 as seed ortholog is 100%.

Group of orthologs #141. Best score 593 bits
Score difference with first non-orthologous sequence - O.cuniculus:593 P.jiroveci:593

G1T3S8              	100.00%		L0P8W6              	100.00%
Bootstrap support for G1T3S8 as seed ortholog is 100%.
Bootstrap support for L0P8W6 as seed ortholog is 100%.

Group of orthologs #142. Best score 593 bits
Score difference with first non-orthologous sequence - O.cuniculus:340 P.jiroveci:593

G1TI13              	100.00%		L0PG07              	100.00%
Bootstrap support for G1TI13 as seed ortholog is 100%.
Bootstrap support for L0PG07 as seed ortholog is 100%.

Group of orthologs #143. Best score 592 bits
Score difference with first non-orthologous sequence - O.cuniculus:592 P.jiroveci:592

G1SMZ5              	100.00%		L0PFI9              	100.00%
Bootstrap support for G1SMZ5 as seed ortholog is 100%.
Bootstrap support for L0PFI9 as seed ortholog is 100%.

Group of orthologs #144. Best score 591 bits
Score difference with first non-orthologous sequence - O.cuniculus:591 P.jiroveci:591

G1T442              	100.00%		L0P917              	100.00%
                    	       		L0PF20              	85.62%
Bootstrap support for G1T442 as seed ortholog is 100%.
Bootstrap support for L0P917 as seed ortholog is 100%.

Group of orthologs #145. Best score 591 bits
Score difference with first non-orthologous sequence - O.cuniculus:591 P.jiroveci:591

G1T7Z2              	100.00%		L0PCV7              	100.00%
G1SK19              	10.05%		
Bootstrap support for G1T7Z2 as seed ortholog is 100%.
Bootstrap support for L0PCV7 as seed ortholog is 100%.

Group of orthologs #146. Best score 591 bits
Score difference with first non-orthologous sequence - O.cuniculus:591 P.jiroveci:591

G1SUQ9              	100.00%		L0P7T0              	100.00%
Bootstrap support for G1SUQ9 as seed ortholog is 100%.
Bootstrap support for L0P7T0 as seed ortholog is 100%.

Group of orthologs #147. Best score 590 bits
Score difference with first non-orthologous sequence - O.cuniculus:590 P.jiroveci:590

G1T7Z0              	100.00%		L0PHB7              	100.00%
Bootstrap support for G1T7Z0 as seed ortholog is 100%.
Bootstrap support for L0PHB7 as seed ortholog is 100%.

Group of orthologs #148. Best score 589 bits
Score difference with first non-orthologous sequence - O.cuniculus:149 P.jiroveci:209

P62143              	100.00%		L0PBH4              	100.00%
G1SEK1              	94.74%		
P62139              	16.84%		
Bootstrap support for P62143 as seed ortholog is 100%.
Bootstrap support for L0PBH4 as seed ortholog is 100%.

Group of orthologs #149. Best score 589 bits
Score difference with first non-orthologous sequence - O.cuniculus:589 P.jiroveci:589

G1SQ45              	100.00%		L0PCT1              	100.00%
Bootstrap support for G1SQ45 as seed ortholog is 100%.
Bootstrap support for L0PCT1 as seed ortholog is 100%.

Group of orthologs #150. Best score 587 bits
Score difference with first non-orthologous sequence - O.cuniculus:308 P.jiroveci:354

Q00804              	100.00%		L0PFW1              	100.00%
G1SHF6              	65.08%		
G1SR77              	62.70%		
G1SMV4              	39.95%		
G1TGY3              	32.86%		
G1TS32              	30.85%		
G1U572              	15.45%		
Bootstrap support for Q00804 as seed ortholog is 100%.
Bootstrap support for L0PFW1 as seed ortholog is 100%.

Group of orthologs #151. Best score 586 bits
Score difference with first non-orthologous sequence - O.cuniculus:277 P.jiroveci:252

G1SUG5              	100.00%		L0PEK2              	100.00%
Bootstrap support for G1SUG5 as seed ortholog is 99%.
Bootstrap support for L0PEK2 as seed ortholog is 100%.

Group of orthologs #152. Best score 586 bits
Score difference with first non-orthologous sequence - O.cuniculus:178 P.jiroveci:400

G1T336              	100.00%		L0PDY0              	100.00%
Bootstrap support for G1T336 as seed ortholog is 99%.
Bootstrap support for L0PDY0 as seed ortholog is 100%.

Group of orthologs #153. Best score 585 bits
Score difference with first non-orthologous sequence - O.cuniculus:585 P.jiroveci:585

G1SPI7              	100.00%		L0P958              	100.00%
Bootstrap support for G1SPI7 as seed ortholog is 100%.
Bootstrap support for L0P958 as seed ortholog is 100%.

Group of orthologs #154. Best score 581 bits
Score difference with first non-orthologous sequence - O.cuniculus:581 P.jiroveci:581

G1TFT3              	100.00%		L0PBV4              	100.00%
Bootstrap support for G1TFT3 as seed ortholog is 100%.
Bootstrap support for L0PBV4 as seed ortholog is 100%.

Group of orthologs #155. Best score 581 bits
Score difference with first non-orthologous sequence - O.cuniculus:171 P.jiroveci:7

G1TSK6              	100.00%		L0P9J9              	100.00%
Bootstrap support for G1TSK6 as seed ortholog is 99%.
Bootstrap support for L0P9J9 as seed ortholog is 52%.
Alternative seed ortholog is L0PF72 (7 bits away from this cluster)

Group of orthologs #156. Best score 578 bits
Score difference with first non-orthologous sequence - O.cuniculus:122 P.jiroveci:578

G1TE61              	100.00%		L0PBW1              	100.00%
G1STV1              	66.67%		
G1U6Y1              	60.77%		
Bootstrap support for G1TE61 as seed ortholog is 99%.
Bootstrap support for L0PBW1 as seed ortholog is 100%.

Group of orthologs #157. Best score 577 bits
Score difference with first non-orthologous sequence - O.cuniculus:577 P.jiroveci:577

G1SSK8              	100.00%		L0PDR3              	100.00%
Bootstrap support for G1SSK8 as seed ortholog is 100%.
Bootstrap support for L0PDR3 as seed ortholog is 100%.

Group of orthologs #158. Best score 576 bits
Score difference with first non-orthologous sequence - O.cuniculus:576 P.jiroveci:576

G1TLP7              	100.00%		L0PB97              	100.00%
G1TCZ8              	43.27%		
Bootstrap support for G1TLP7 as seed ortholog is 100%.
Bootstrap support for L0PB97 as seed ortholog is 100%.

Group of orthologs #159. Best score 576 bits
Score difference with first non-orthologous sequence - O.cuniculus:576 P.jiroveci:576

G1U368              	100.00%		L0PDU2              	100.00%
Bootstrap support for G1U368 as seed ortholog is 100%.
Bootstrap support for L0PDU2 as seed ortholog is 100%.

Group of orthologs #160. Best score 575 bits
Score difference with first non-orthologous sequence - O.cuniculus:575 P.jiroveci:575

G1TVI3              	100.00%		L0PES7              	100.00%
G1SXZ7              	97.41%		
G1TUE0              	74.06%		
Bootstrap support for G1TVI3 as seed ortholog is 100%.
Bootstrap support for L0PES7 as seed ortholog is 100%.

Group of orthologs #161. Best score 572 bits
Score difference with first non-orthologous sequence - O.cuniculus:572 P.jiroveci:572

G1SNM1              	100.00%		L0PA45              	100.00%
Bootstrap support for G1SNM1 as seed ortholog is 100%.
Bootstrap support for L0PA45 as seed ortholog is 100%.

Group of orthologs #162. Best score 571 bits
Score difference with first non-orthologous sequence - O.cuniculus:571 P.jiroveci:571

G1SJD3              	100.00%		L0PBM4              	100.00%
G1TZ09              	17.62%		
Bootstrap support for G1SJD3 as seed ortholog is 100%.
Bootstrap support for L0PBM4 as seed ortholog is 100%.

Group of orthologs #163. Best score 571 bits
Score difference with first non-orthologous sequence - O.cuniculus:571 P.jiroveci:571

G1T5H2              	100.00%		L0PA85              	100.00%
Bootstrap support for G1T5H2 as seed ortholog is 100%.
Bootstrap support for L0PA85 as seed ortholog is 100%.

Group of orthologs #164. Best score 570 bits
Score difference with first non-orthologous sequence - O.cuniculus:276 P.jiroveci:570

G1TL06              	100.00%		L0P9D4              	100.00%
G1TL63              	78.88%		
G1U3I6              	58.57%		
G1TBB3              	36.65%		
Bootstrap support for G1TL06 as seed ortholog is 100%.
Bootstrap support for L0P9D4 as seed ortholog is 100%.

Group of orthologs #165. Best score 568 bits
Score difference with first non-orthologous sequence - O.cuniculus:568 P.jiroveci:568

G1SJ32              	100.00%		L0PCA7              	100.00%
Bootstrap support for G1SJ32 as seed ortholog is 100%.
Bootstrap support for L0PCA7 as seed ortholog is 100%.

Group of orthologs #166. Best score 567 bits
Score difference with first non-orthologous sequence - O.cuniculus:462 P.jiroveci:493

G1SWJ4              	100.00%		L0PCS2              	100.00%
Bootstrap support for G1SWJ4 as seed ortholog is 100%.
Bootstrap support for L0PCS2 as seed ortholog is 100%.

Group of orthologs #167. Best score 566 bits
Score difference with first non-orthologous sequence - O.cuniculus:566 P.jiroveci:566

Q28653              	100.00%		L0PG37              	100.00%
Q28651              	42.58%		
G1TDZ1              	8.48%		
Q28647              	7.67%		
Bootstrap support for Q28653 as seed ortholog is 100%.
Bootstrap support for L0PG37 as seed ortholog is 100%.

Group of orthologs #168. Best score 561 bits
Score difference with first non-orthologous sequence - O.cuniculus:561 P.jiroveci:561

G1SV87              	100.00%		L0PCP1              	100.00%
Bootstrap support for G1SV87 as seed ortholog is 100%.
Bootstrap support for L0PCP1 as seed ortholog is 100%.

Group of orthologs #169. Best score 559 bits
Score difference with first non-orthologous sequence - O.cuniculus:559 P.jiroveci:373

G1SZ93              	100.00%		L0PCD8              	100.00%
Bootstrap support for G1SZ93 as seed ortholog is 100%.
Bootstrap support for L0PCD8 as seed ortholog is 100%.

Group of orthologs #170. Best score 557 bits
Score difference with first non-orthologous sequence - O.cuniculus:557 P.jiroveci:557

Q9N1E2              	100.00%		L0P8P8              	100.00%
Bootstrap support for Q9N1E2 as seed ortholog is 100%.
Bootstrap support for L0P8P8 as seed ortholog is 100%.

Group of orthologs #171. Best score 555 bits
Score difference with first non-orthologous sequence - O.cuniculus:73 P.jiroveci:16

G1SK67              	100.00%		L0PGY9              	100.00%
G1TF60              	62.90%		
Bootstrap support for G1SK67 as seed ortholog is 88%.
Bootstrap support for L0PGY9 as seed ortholog is 68%.
Alternative seed ortholog is L0PCK5 (16 bits away from this cluster)

Group of orthologs #172. Best score 552 bits
Score difference with first non-orthologous sequence - O.cuniculus:203 P.jiroveci:197

P67777              	100.00%		L0P7D9              	100.00%
P11611              	90.10%		
G1TSB1              	50.50%		
Bootstrap support for P67777 as seed ortholog is 100%.
Bootstrap support for L0P7D9 as seed ortholog is 100%.

Group of orthologs #173. Best score 537 bits
Score difference with first non-orthologous sequence - O.cuniculus:204 P.jiroveci:537

G1SLM0              	100.00%		L0P802              	100.00%
G1TUR3              	99.73%		
G1SIU2              	36.58%		
G1SDJ7              	36.44%		
Bootstrap support for G1SLM0 as seed ortholog is 99%.
Bootstrap support for L0P802 as seed ortholog is 100%.

Group of orthologs #174. Best score 534 bits
Score difference with first non-orthologous sequence - O.cuniculus:418 P.jiroveci:482

G1SF02              	100.00%		L0PBU6              	100.00%
Bootstrap support for G1SF02 as seed ortholog is 100%.
Bootstrap support for L0PBU6 as seed ortholog is 100%.

Group of orthologs #175. Best score 533 bits
Score difference with first non-orthologous sequence - O.cuniculus:533 P.jiroveci:533

G1SZ03              	100.00%		L0P9U3              	100.00%
Bootstrap support for G1SZ03 as seed ortholog is 100%.
Bootstrap support for L0P9U3 as seed ortholog is 100%.

Group of orthologs #176. Best score 532 bits
Score difference with first non-orthologous sequence - O.cuniculus:532 P.jiroveci:532

G1TBV4              	100.00%		L0P6X8              	100.00%
Bootstrap support for G1TBV4 as seed ortholog is 100%.
Bootstrap support for L0P6X8 as seed ortholog is 100%.

Group of orthologs #177. Best score 530 bits
Score difference with first non-orthologous sequence - O.cuniculus:530 P.jiroveci:530

G1SKA3              	100.00%		L0PB12              	100.00%
Bootstrap support for G1SKA3 as seed ortholog is 100%.
Bootstrap support for L0PB12 as seed ortholog is 100%.

Group of orthologs #178. Best score 529 bits
Score difference with first non-orthologous sequence - O.cuniculus:324 P.jiroveci:529

G1SU14              	100.00%		L0P905              	100.00%
G1SGN8              	27.87%		
G1SGP5              	21.00%		
G1T7S5              	11.85%		
G1TVN1              	11.11%		
Q28689              	10.94%		
G1SI90              	10.67%		
G1TK54              	7.61%		
P82451              	5.56%		
G1U4B4              	5.47%		
G1SLM6              	5.12%		
Bootstrap support for G1SU14 as seed ortholog is 100%.
Bootstrap support for L0P905 as seed ortholog is 100%.

Group of orthologs #179. Best score 527 bits
Score difference with first non-orthologous sequence - O.cuniculus:291 P.jiroveci:61

G1SN05              	100.00%		L0P7V6              	100.00%
P29562              	73.76%		
Bootstrap support for G1SN05 as seed ortholog is 100%.
Bootstrap support for L0P7V6 as seed ortholog is 98%.

Group of orthologs #180. Best score 525 bits
Score difference with first non-orthologous sequence - O.cuniculus:306 P.jiroveci:525

G1U3R1              	100.00%		L0P9I8              	100.00%
G1SL02              	73.25%		
Bootstrap support for G1U3R1 as seed ortholog is 100%.
Bootstrap support for L0P9I8 as seed ortholog is 100%.

Group of orthologs #181. Best score 523 bits
Score difference with first non-orthologous sequence - O.cuniculus:523 P.jiroveci:523

G1SZ02              	100.00%		L0PEZ0              	100.00%
Bootstrap support for G1SZ02 as seed ortholog is 100%.
Bootstrap support for L0PEZ0 as seed ortholog is 100%.

Group of orthologs #182. Best score 522 bits
Score difference with first non-orthologous sequence - O.cuniculus:309 P.jiroveci:405

G1TBQ4              	100.00%		L0PEP2              	100.00%
Bootstrap support for G1TBQ4 as seed ortholog is 100%.
Bootstrap support for L0PEP2 as seed ortholog is 100%.

Group of orthologs #183. Best score 522 bits
Score difference with first non-orthologous sequence - O.cuniculus:522 P.jiroveci:522

G1TB17              	100.00%		L0PFT7              	100.00%
Bootstrap support for G1TB17 as seed ortholog is 100%.
Bootstrap support for L0PFT7 as seed ortholog is 100%.

Group of orthologs #184. Best score 521 bits
Score difference with first non-orthologous sequence - O.cuniculus:521 P.jiroveci:521

P07511              	100.00%		L0PCX1              	100.00%
P14519              	19.91%		
Bootstrap support for P07511 as seed ortholog is 100%.
Bootstrap support for L0PCX1 as seed ortholog is 100%.

Group of orthologs #185. Best score 520 bits
Score difference with first non-orthologous sequence - O.cuniculus:520 P.jiroveci:520

G1TC46              	100.00%		L0PBR9              	100.00%
G1SHD6              	46.94%		
Bootstrap support for G1TC46 as seed ortholog is 100%.
Bootstrap support for L0PBR9 as seed ortholog is 100%.

Group of orthologs #186. Best score 519 bits
Score difference with first non-orthologous sequence - O.cuniculus:270 P.jiroveci:519

G1T4K8              	100.00%		L0PET9              	100.00%
G1TNS1              	88.40%		
G1TRC4              	84.03%		
Bootstrap support for G1T4K8 as seed ortholog is 100%.
Bootstrap support for L0PET9 as seed ortholog is 100%.

Group of orthologs #187. Best score 519 bits
Score difference with first non-orthologous sequence - O.cuniculus:337 P.jiroveci:519

G1T7V5              	100.00%		L0P7Y5              	100.00%
Bootstrap support for G1T7V5 as seed ortholog is 100%.
Bootstrap support for L0P7Y5 as seed ortholog is 100%.

Group of orthologs #188. Best score 518 bits
Score difference with first non-orthologous sequence - O.cuniculus:518 P.jiroveci:518

G1U610              	100.00%		L0PEA0              	100.00%
Bootstrap support for G1U610 as seed ortholog is 100%.
Bootstrap support for L0PEA0 as seed ortholog is 100%.

Group of orthologs #189. Best score 517 bits
Score difference with first non-orthologous sequence - O.cuniculus:342 P.jiroveci:517

G1TCX0              	100.00%		L0P6Y2              	100.00%
Bootstrap support for G1TCX0 as seed ortholog is 100%.
Bootstrap support for L0P6Y2 as seed ortholog is 100%.

Group of orthologs #190. Best score 517 bits
Score difference with first non-orthologous sequence - O.cuniculus:339 P.jiroveci:517

G1TDE1              	100.00%		L0P718              	100.00%
Bootstrap support for G1TDE1 as seed ortholog is 100%.
Bootstrap support for L0P718 as seed ortholog is 100%.

Group of orthologs #191. Best score 513 bits
Score difference with first non-orthologous sequence - O.cuniculus:272 P.jiroveci:513

G1T9W3              	100.00%		L0PBP3              	100.00%
G1SXJ6              	54.88%		
Bootstrap support for G1T9W3 as seed ortholog is 100%.
Bootstrap support for L0PBP3 as seed ortholog is 100%.

Group of orthologs #192. Best score 511 bits
Score difference with first non-orthologous sequence - O.cuniculus:511 P.jiroveci:511

Q29512              	100.00%		L0PAN9              	100.00%
G1TDP2              	83.79%		L0PID8              	83.03%
Bootstrap support for Q29512 as seed ortholog is 100%.
Bootstrap support for L0PAN9 as seed ortholog is 100%.

Group of orthologs #193. Best score 511 bits
Score difference with first non-orthologous sequence - O.cuniculus:126 P.jiroveci:511

G1T8R2              	100.00%		L0P9A8              	100.00%
                    	       		L0PHB9              	76.20%
Bootstrap support for G1T8R2 as seed ortholog is 99%.
Bootstrap support for L0P9A8 as seed ortholog is 100%.

Group of orthologs #194. Best score 508 bits
Score difference with first non-orthologous sequence - O.cuniculus:346 P.jiroveci:508

G1SFF5              	100.00%		L0PAA4              	100.00%
G1SF59              	42.18%		
Bootstrap support for G1SFF5 as seed ortholog is 100%.
Bootstrap support for L0PAA4 as seed ortholog is 100%.

Group of orthologs #195. Best score 508 bits
Score difference with first non-orthologous sequence - O.cuniculus:300 P.jiroveci:508

G1T1U7              	100.00%		L0P7B5              	100.00%
G1SIB2              	41.80%		
Bootstrap support for G1T1U7 as seed ortholog is 100%.
Bootstrap support for L0P7B5 as seed ortholog is 100%.

Group of orthologs #196. Best score 507 bits
Score difference with first non-orthologous sequence - O.cuniculus:199 P.jiroveci:284

G1TC72              	100.00%		L0P8E8              	100.00%
                    	       		L0PEB0              	100.00%
Bootstrap support for G1TC72 as seed ortholog is 100%.
Bootstrap support for L0P8E8 as seed ortholog is 100%.
Bootstrap support for L0PEB0 as seed ortholog is 100%.

Group of orthologs #197. Best score 507 bits
Score difference with first non-orthologous sequence - O.cuniculus:265 P.jiroveci:149

G1SPM8              	100.00%		L0PGE8              	100.00%
Bootstrap support for G1SPM8 as seed ortholog is 100%.
Bootstrap support for L0PGE8 as seed ortholog is 99%.

Group of orthologs #198. Best score 506 bits
Score difference with first non-orthologous sequence - O.cuniculus:346 P.jiroveci:506

G1SMG5              	100.00%		L0P7N1              	100.00%
Bootstrap support for G1SMG5 as seed ortholog is 100%.
Bootstrap support for L0P7N1 as seed ortholog is 100%.

Group of orthologs #199. Best score 505 bits
Score difference with first non-orthologous sequence - O.cuniculus:505 P.jiroveci:505

G1SGC5              	100.00%		L0P8Z9              	100.00%
Bootstrap support for G1SGC5 as seed ortholog is 100%.
Bootstrap support for L0P8Z9 as seed ortholog is 100%.

Group of orthologs #200. Best score 503 bits
Score difference with first non-orthologous sequence - O.cuniculus:503 P.jiroveci:503

G1SUT8              	100.00%		L0PAS3              	100.00%
G1SF45              	40.37%		
Bootstrap support for G1SUT8 as seed ortholog is 100%.
Bootstrap support for L0PAS3 as seed ortholog is 100%.

Group of orthologs #201. Best score 502 bits
Score difference with first non-orthologous sequence - O.cuniculus:502 P.jiroveci:450

G1T846              	100.00%		L0P7R1              	100.00%
Bootstrap support for G1T846 as seed ortholog is 100%.
Bootstrap support for L0P7R1 as seed ortholog is 100%.

Group of orthologs #202. Best score 501 bits
Score difference with first non-orthologous sequence - O.cuniculus:397 P.jiroveci:501

G1T0W1              	100.00%		L0PDG5              	100.00%
Bootstrap support for G1T0W1 as seed ortholog is 100%.
Bootstrap support for L0PDG5 as seed ortholog is 100%.

Group of orthologs #203. Best score 500 bits
Score difference with first non-orthologous sequence - O.cuniculus:42 P.jiroveci:500

G1U4F8              	100.00%		L0P890              	100.00%
Bootstrap support for G1U4F8 as seed ortholog is 93%.
Bootstrap support for L0P890 as seed ortholog is 100%.

Group of orthologs #204. Best score 499 bits
Score difference with first non-orthologous sequence - O.cuniculus:499 P.jiroveci:499

G1TEQ8              	100.00%		L0PBG8              	100.00%
Bootstrap support for G1TEQ8 as seed ortholog is 100%.
Bootstrap support for L0PBG8 as seed ortholog is 100%.

Group of orthologs #205. Best score 499 bits
Score difference with first non-orthologous sequence - O.cuniculus:499 P.jiroveci:499

G1TR66              	100.00%		L0PAL6              	100.00%
Bootstrap support for G1TR66 as seed ortholog is 100%.
Bootstrap support for L0PAL6 as seed ortholog is 100%.

Group of orthologs #206. Best score 496 bits
Score difference with first non-orthologous sequence - O.cuniculus:420 P.jiroveci:432

G1SEE0              	100.00%		L0P992              	100.00%
G1TRP6              	83.46%		
G1SDU3              	77.10%		
Bootstrap support for G1SEE0 as seed ortholog is 100%.
Bootstrap support for L0P992 as seed ortholog is 100%.

Group of orthologs #207. Best score 496 bits
Score difference with first non-orthologous sequence - O.cuniculus:409 P.jiroveci:496

G1U6X4              	100.00%		L0PB50              	100.00%
Bootstrap support for G1U6X4 as seed ortholog is 100%.
Bootstrap support for L0PB50 as seed ortholog is 100%.

Group of orthologs #208. Best score 495 bits
Score difference with first non-orthologous sequence - O.cuniculus:369 P.jiroveci:276

G1U9T2              	100.00%		L0PF08              	100.00%
G1TRZ8              	70.42%		
G1SR75              	59.51%		
Bootstrap support for G1U9T2 as seed ortholog is 100%.
Bootstrap support for L0PF08 as seed ortholog is 100%.

Group of orthologs #209. Best score 495 bits
Score difference with first non-orthologous sequence - O.cuniculus:300 P.jiroveci:495

G1TZV3              	100.00%		L0PA75              	100.00%
G1TSM0              	5.06%		
Bootstrap support for G1TZV3 as seed ortholog is 100%.
Bootstrap support for L0PA75 as seed ortholog is 100%.

Group of orthologs #210. Best score 495 bits
Score difference with first non-orthologous sequence - O.cuniculus:495 P.jiroveci:495

G1SHP8              	100.00%		L0PC09              	100.00%
Bootstrap support for G1SHP8 as seed ortholog is 100%.
Bootstrap support for L0PC09 as seed ortholog is 100%.

Group of orthologs #211. Best score 493 bits
Score difference with first non-orthologous sequence - O.cuniculus:212 P.jiroveci:266

G1SEX6              	100.00%		L0PAW8              	100.00%
G1T9T9              	8.16%		
G1U383              	5.35%		
Bootstrap support for G1SEX6 as seed ortholog is 100%.
Bootstrap support for L0PAW8 as seed ortholog is 100%.

Group of orthologs #212. Best score 493 bits
Score difference with first non-orthologous sequence - O.cuniculus:493 P.jiroveci:493

G1SR58              	100.00%		L0PCL9              	100.00%
Bootstrap support for G1SR58 as seed ortholog is 100%.
Bootstrap support for L0PCL9 as seed ortholog is 100%.

Group of orthologs #213. Best score 492 bits
Score difference with first non-orthologous sequence - O.cuniculus:396 P.jiroveci:492

O77507              	100.00%		L0PDH7              	100.00%
Bootstrap support for O77507 as seed ortholog is 100%.
Bootstrap support for L0PDH7 as seed ortholog is 100%.

Group of orthologs #214. Best score 490 bits
Score difference with first non-orthologous sequence - O.cuniculus:289 P.jiroveci:490

G1U0U5              	100.00%		L0PBI1              	100.00%
G1SV05              	42.09%		
G1TUL8              	36.22%		
Bootstrap support for G1U0U5 as seed ortholog is 100%.
Bootstrap support for L0PBI1 as seed ortholog is 100%.

Group of orthologs #215. Best score 490 bits
Score difference with first non-orthologous sequence - O.cuniculus:304 P.jiroveci:54

O18894              	100.00%		L0PAI4              	100.00%
G1TWN5              	62.83%		
Q9TTU3              	61.89%		
Bootstrap support for O18894 as seed ortholog is 100%.
Bootstrap support for L0PAI4 as seed ortholog is 84%.

Group of orthologs #216. Best score 489 bits
Score difference with first non-orthologous sequence - O.cuniculus:489 P.jiroveci:489

Q00006              	100.00%		L0P8F1              	100.00%
G1TVI9              	81.28%		
P63150              	81.28%		
P50410              	77.37%		
G1TFK5              	36.87%		
G1TUP4              	29.33%		
Bootstrap support for Q00006 as seed ortholog is 100%.
Bootstrap support for L0P8F1 as seed ortholog is 100%.

Group of orthologs #217. Best score 489 bits
Score difference with first non-orthologous sequence - O.cuniculus:345 P.jiroveci:489

G1T236              	100.00%		L0PFQ5              	100.00%
Bootstrap support for G1T236 as seed ortholog is 100%.
Bootstrap support for L0PFQ5 as seed ortholog is 100%.

Group of orthologs #218. Best score 488 bits
Score difference with first non-orthologous sequence - O.cuniculus:332 P.jiroveci:398

G1U8W6              	100.00%		L0PG55              	100.00%
G1SNS5              	94.13%		
B7NZQ6              	76.28%		
G1TT96              	11.25%		
Bootstrap support for G1U8W6 as seed ortholog is 100%.
Bootstrap support for L0PG55 as seed ortholog is 100%.

Group of orthologs #219. Best score 488 bits
Score difference with first non-orthologous sequence - O.cuniculus:375 P.jiroveci:488

G1SL64              	100.00%		L0PGH3              	100.00%
G1T6U3              	47.34%		
Bootstrap support for G1SL64 as seed ortholog is 100%.
Bootstrap support for L0PGH3 as seed ortholog is 100%.

Group of orthologs #220. Best score 488 bits
Score difference with first non-orthologous sequence - O.cuniculus:314 P.jiroveci:130

G1SKL2              	100.00%		L0P6T3              	100.00%
Bootstrap support for G1SKL2 as seed ortholog is 100%.
Bootstrap support for L0P6T3 as seed ortholog is 99%.

Group of orthologs #221. Best score 488 bits
Score difference with first non-orthologous sequence - O.cuniculus:488 P.jiroveci:312

G1STX4              	100.00%		L0PFN9              	100.00%
Bootstrap support for G1STX4 as seed ortholog is 100%.
Bootstrap support for L0PFN9 as seed ortholog is 100%.

Group of orthologs #222. Best score 488 bits
Score difference with first non-orthologous sequence - O.cuniculus:96 P.jiroveci:368

P33674              	100.00%		L0PE30              	100.00%
Bootstrap support for P33674 as seed ortholog is 99%.
Bootstrap support for L0PE30 as seed ortholog is 100%.

Group of orthologs #223. Best score 487 bits
Score difference with first non-orthologous sequence - O.cuniculus:487 P.jiroveci:487

G1SJ63              	100.00%		L0P7P1              	100.00%
Bootstrap support for G1SJ63 as seed ortholog is 100%.
Bootstrap support for L0P7P1 as seed ortholog is 100%.

Group of orthologs #224. Best score 487 bits
Score difference with first non-orthologous sequence - O.cuniculus:487 P.jiroveci:487

G1T8H4              	100.00%		L0PFM4              	100.00%
Bootstrap support for G1T8H4 as seed ortholog is 100%.
Bootstrap support for L0PFM4 as seed ortholog is 100%.

Group of orthologs #225. Best score 485 bits
Score difference with first non-orthologous sequence - O.cuniculus:485 P.jiroveci:485

G1SE74              	100.00%		L0PAP1              	100.00%
Bootstrap support for G1SE74 as seed ortholog is 100%.
Bootstrap support for L0PAP1 as seed ortholog is 100%.

Group of orthologs #226. Best score 484 bits
Score difference with first non-orthologous sequence - O.cuniculus:385 P.jiroveci:484

G1SI29              	100.00%		L0P9G2              	100.00%
Bootstrap support for G1SI29 as seed ortholog is 100%.
Bootstrap support for L0P9G2 as seed ortholog is 100%.

Group of orthologs #227. Best score 483 bits
Score difference with first non-orthologous sequence - O.cuniculus:240 P.jiroveci:483

G1SQA5              	100.00%		L0PE41              	100.00%
Bootstrap support for G1SQA5 as seed ortholog is 99%.
Bootstrap support for L0PE41 as seed ortholog is 100%.

Group of orthologs #228. Best score 482 bits
Score difference with first non-orthologous sequence - O.cuniculus:482 P.jiroveci:482

G1T8F7              	100.00%		L0PHY6              	100.00%
Bootstrap support for G1T8F7 as seed ortholog is 100%.
Bootstrap support for L0PHY6 as seed ortholog is 100%.

Group of orthologs #229. Best score 481 bits
Score difference with first non-orthologous sequence - O.cuniculus:481 P.jiroveci:481

G1SLD6              	100.00%		L0PCY5              	100.00%
G1SLE1              	48.37%		
Bootstrap support for G1SLD6 as seed ortholog is 100%.
Bootstrap support for L0PCY5 as seed ortholog is 100%.

Group of orthologs #230. Best score 478 bits
Score difference with first non-orthologous sequence - O.cuniculus:263 P.jiroveci:297

G1TKH6              	100.00%		L0PB67              	100.00%
G1TPU5              	66.94%		
Bootstrap support for G1TKH6 as seed ortholog is 100%.
Bootstrap support for L0PB67 as seed ortholog is 100%.

Group of orthologs #231. Best score 478 bits
Score difference with first non-orthologous sequence - O.cuniculus:272 P.jiroveci:347

G1SMS3              	100.00%		L0PC38              	100.00%
Bootstrap support for G1SMS3 as seed ortholog is 100%.
Bootstrap support for L0PC38 as seed ortholog is 100%.

Group of orthologs #232. Best score 478 bits
Score difference with first non-orthologous sequence - O.cuniculus:478 P.jiroveci:478

G1SUP9              	100.00%		L0P921              	100.00%
Bootstrap support for G1SUP9 as seed ortholog is 100%.
Bootstrap support for L0P921 as seed ortholog is 100%.

Group of orthologs #233. Best score 476 bits
Score difference with first non-orthologous sequence - O.cuniculus:476 P.jiroveci:476

G1SQA8              	100.00%		L0PDC9              	100.00%
G1U6C7              	83.43%		
Bootstrap support for G1SQA8 as seed ortholog is 100%.
Bootstrap support for L0PDC9 as seed ortholog is 100%.

Group of orthologs #234. Best score 476 bits
Score difference with first non-orthologous sequence - O.cuniculus:476 P.jiroveci:476

G1SZE0              	100.00%		L0PFC2              	100.00%
Bootstrap support for G1SZE0 as seed ortholog is 100%.
Bootstrap support for L0PFC2 as seed ortholog is 100%.

Group of orthologs #235. Best score 472 bits
Score difference with first non-orthologous sequence - O.cuniculus:472 P.jiroveci:472

G1TDG0              	100.00%		L0PAC4              	100.00%
                    	       		L0P871              	98.20%
Bootstrap support for G1TDG0 as seed ortholog is 100%.
Bootstrap support for L0PAC4 as seed ortholog is 100%.

Group of orthologs #236. Best score 471 bits
Score difference with first non-orthologous sequence - O.cuniculus:263 P.jiroveci:257

G1SXH2              	100.00%		L0PC99              	100.00%
Bootstrap support for G1SXH2 as seed ortholog is 100%.
Bootstrap support for L0PC99 as seed ortholog is 100%.

Group of orthologs #237. Best score 469 bits
Score difference with first non-orthologous sequence - O.cuniculus:320 P.jiroveci:362

G1T753              	100.00%		L0P8C2              	100.00%
Bootstrap support for G1T753 as seed ortholog is 100%.
Bootstrap support for L0P8C2 as seed ortholog is 100%.

Group of orthologs #238. Best score 467 bits
Score difference with first non-orthologous sequence - O.cuniculus:140 P.jiroveci:467

G1SK52              	100.00%		L0PF23              	100.00%
Bootstrap support for G1SK52 as seed ortholog is 99%.
Bootstrap support for L0PF23 as seed ortholog is 100%.

Group of orthologs #239. Best score 467 bits
Score difference with first non-orthologous sequence - O.cuniculus:221 P.jiroveci:98

P11084              	100.00%		L0PFW2              	100.00%
Bootstrap support for P11084 as seed ortholog is 100%.
Bootstrap support for L0PFW2 as seed ortholog is 99%.

Group of orthologs #240. Best score 466 bits
Score difference with first non-orthologous sequence - O.cuniculus:466 P.jiroveci:466

G1SIV7              	100.00%		L0PEL0              	100.00%
Bootstrap support for G1SIV7 as seed ortholog is 100%.
Bootstrap support for L0PEL0 as seed ortholog is 100%.

Group of orthologs #241. Best score 466 bits
Score difference with first non-orthologous sequence - O.cuniculus:466 P.jiroveci:466

G1SH41              	100.00%		L0PG96              	100.00%
Bootstrap support for G1SH41 as seed ortholog is 100%.
Bootstrap support for L0PG96 as seed ortholog is 100%.

Group of orthologs #242. Best score 466 bits
Score difference with first non-orthologous sequence - O.cuniculus:414 P.jiroveci:466

G1TI71              	100.00%		L0P9C8              	100.00%
Bootstrap support for G1TI71 as seed ortholog is 100%.
Bootstrap support for L0P9C8 as seed ortholog is 100%.

Group of orthologs #243. Best score 465 bits
Score difference with first non-orthologous sequence - O.cuniculus:465 P.jiroveci:465

G1T062              	100.00%		L0PCS3              	100.00%
Bootstrap support for G1T062 as seed ortholog is 100%.
Bootstrap support for L0PCS3 as seed ortholog is 100%.

Group of orthologs #244. Best score 464 bits
Score difference with first non-orthologous sequence - O.cuniculus:464 P.jiroveci:464

G1SDT9              	100.00%		L0PBV8              	100.00%
Bootstrap support for G1SDT9 as seed ortholog is 100%.
Bootstrap support for L0PBV8 as seed ortholog is 100%.

Group of orthologs #245. Best score 464 bits
Score difference with first non-orthologous sequence - O.cuniculus:331 P.jiroveci:464

G1U9U0              	100.00%		L0P8N1              	100.00%
Bootstrap support for G1U9U0 as seed ortholog is 100%.
Bootstrap support for L0P8N1 as seed ortholog is 100%.

Group of orthologs #246. Best score 458 bits
Score difference with first non-orthologous sequence - O.cuniculus:458 P.jiroveci:458

G1U229              	100.00%		L0PDM3              	100.00%
G1TPR8              	8.54%		
Bootstrap support for G1U229 as seed ortholog is 100%.
Bootstrap support for L0PDM3 as seed ortholog is 100%.

Group of orthologs #247. Best score 458 bits
Score difference with first non-orthologous sequence - O.cuniculus:162 P.jiroveci:458

G1SQY7              	100.00%		L0P8R6              	100.00%
Bootstrap support for G1SQY7 as seed ortholog is 99%.
Bootstrap support for L0P8R6 as seed ortholog is 100%.

Group of orthologs #248. Best score 456 bits
Score difference with first non-orthologous sequence - O.cuniculus:456 P.jiroveci:261

G1SN68              	100.00%		L0PED9              	100.00%
Bootstrap support for G1SN68 as seed ortholog is 100%.
Bootstrap support for L0PED9 as seed ortholog is 100%.

Group of orthologs #249. Best score 455 bits
Score difference with first non-orthologous sequence - O.cuniculus:455 P.jiroveci:455

G1SKV7              	100.00%		L0P7D2              	100.00%
G1SKW3              	14.41%		
Bootstrap support for G1SKV7 as seed ortholog is 100%.
Bootstrap support for L0P7D2 as seed ortholog is 100%.

Group of orthologs #250. Best score 453 bits
Score difference with first non-orthologous sequence - O.cuniculus:453 P.jiroveci:453

G1SJY8              	100.00%		L0PC82              	100.00%
G1SPL7              	33.50%		
Bootstrap support for G1SJY8 as seed ortholog is 100%.
Bootstrap support for L0PC82 as seed ortholog is 100%.

Group of orthologs #251. Best score 452 bits
Score difference with first non-orthologous sequence - O.cuniculus:452 P.jiroveci:452

G1TCK6              	100.00%		L0PBT8              	100.00%
Bootstrap support for G1TCK6 as seed ortholog is 100%.
Bootstrap support for L0PBT8 as seed ortholog is 100%.

Group of orthologs #252. Best score 452 bits
Score difference with first non-orthologous sequence - O.cuniculus:370 P.jiroveci:452

P23612              	100.00%		L0PG05              	100.00%
Bootstrap support for P23612 as seed ortholog is 100%.
Bootstrap support for L0PG05 as seed ortholog is 100%.

Group of orthologs #253. Best score 448 bits
Score difference with first non-orthologous sequence - O.cuniculus:448 P.jiroveci:448

G1SGI3              	100.00%		L0PBN1              	100.00%
Bootstrap support for G1SGI3 as seed ortholog is 100%.
Bootstrap support for L0PBN1 as seed ortholog is 100%.

Group of orthologs #254. Best score 448 bits
Score difference with first non-orthologous sequence - O.cuniculus:448 P.jiroveci:448

G1TED5              	100.00%		L0PF49              	100.00%
Bootstrap support for G1TED5 as seed ortholog is 100%.
Bootstrap support for L0PF49 as seed ortholog is 100%.

Group of orthologs #255. Best score 446 bits
Score difference with first non-orthologous sequence - O.cuniculus:446 P.jiroveci:446

G1T004              	100.00%		L0P9C9              	100.00%
Bootstrap support for G1T004 as seed ortholog is 100%.
Bootstrap support for L0P9C9 as seed ortholog is 100%.

Group of orthologs #256. Best score 446 bits
Score difference with first non-orthologous sequence - O.cuniculus:446 P.jiroveci:446

G1T365              	100.00%		L0PAE9              	100.00%
Bootstrap support for G1T365 as seed ortholog is 100%.
Bootstrap support for L0PAE9 as seed ortholog is 100%.

Group of orthologs #257. Best score 443 bits
Score difference with first non-orthologous sequence - O.cuniculus:183 P.jiroveci:443

G1SZR6              	100.00%		L0PCE9              	100.00%
Bootstrap support for G1SZR6 as seed ortholog is 99%.
Bootstrap support for L0PCE9 as seed ortholog is 100%.

Group of orthologs #258. Best score 442 bits
Score difference with first non-orthologous sequence - O.cuniculus:222 P.jiroveci:329

G1TNT7              	100.00%		L0PEM1              	100.00%
Bootstrap support for G1TNT7 as seed ortholog is 100%.
Bootstrap support for L0PEM1 as seed ortholog is 100%.

Group of orthologs #259. Best score 442 bits
Score difference with first non-orthologous sequence - O.cuniculus:442 P.jiroveci:442

G1U2N0              	100.00%		L0P969              	100.00%
Bootstrap support for G1U2N0 as seed ortholog is 100%.
Bootstrap support for L0P969 as seed ortholog is 100%.

Group of orthologs #260. Best score 440 bits
Score difference with first non-orthologous sequence - O.cuniculus:29 P.jiroveci:440

P05772              	100.00%		L0P9H5              	100.00%
P10102              	70.36%		L0P8S4              	53.97%
P10829              	55.75%		
P10830              	15.34%		
G1TAD8              	13.58%		
G1SY23              	8.70%		
G1T035              	6.53%		
Bootstrap support for P05772 as seed ortholog is 71%.
Alternative seed ortholog is G1TZ55 (29 bits away from this cluster)
Bootstrap support for L0P9H5 as seed ortholog is 100%.

Group of orthologs #261. Best score 440 bits
Score difference with first non-orthologous sequence - O.cuniculus:440 P.jiroveci:440

G1SUN6              	100.00%		L0PDS0              	100.00%
Bootstrap support for G1SUN6 as seed ortholog is 100%.
Bootstrap support for L0PDS0 as seed ortholog is 100%.

Group of orthologs #262. Best score 439 bits
Score difference with first non-orthologous sequence - O.cuniculus:263 P.jiroveci:350

G1SRM2              	100.00%		L0PAL3              	100.00%
G1SVM0              	33.16%		
Bootstrap support for G1SRM2 as seed ortholog is 100%.
Bootstrap support for L0PAL3 as seed ortholog is 100%.

Group of orthologs #263. Best score 438 bits
Score difference with first non-orthologous sequence - O.cuniculus:438 P.jiroveci:438

G1SF78              	100.00%		L0PFR4              	100.00%
G1SID3              	21.10%		
Bootstrap support for G1SF78 as seed ortholog is 100%.
Bootstrap support for L0PFR4 as seed ortholog is 100%.

Group of orthologs #264. Best score 438 bits
Score difference with first non-orthologous sequence - O.cuniculus:178 P.jiroveci:290

G1SQ23              	100.00%		L0PGV4              	100.00%
G1SPM5              	85.80%		
Bootstrap support for G1SQ23 as seed ortholog is 100%.
Bootstrap support for L0PGV4 as seed ortholog is 100%.

Group of orthologs #265. Best score 437 bits
Score difference with first non-orthologous sequence - O.cuniculus:437 P.jiroveci:437

G1SRA8              	100.00%		L0PB35              	100.00%
Bootstrap support for G1SRA8 as seed ortholog is 100%.
Bootstrap support for L0PB35 as seed ortholog is 100%.

Group of orthologs #266. Best score 436 bits
Score difference with first non-orthologous sequence - O.cuniculus:281 P.jiroveci:321

G1U4E6              	100.00%		L0PHE4              	100.00%
G1SLQ4              	90.48%		
G1SDC1              	69.76%		
Bootstrap support for G1U4E6 as seed ortholog is 100%.
Bootstrap support for L0PHE4 as seed ortholog is 100%.

Group of orthologs #267. Best score 436 bits
Score difference with first non-orthologous sequence - O.cuniculus:436 P.jiroveci:436

G1SXL6              	100.00%		L0PB32              	100.00%
G1T9T7              	56.41%		
Bootstrap support for G1SXL6 as seed ortholog is 100%.
Bootstrap support for L0PB32 as seed ortholog is 100%.

Group of orthologs #268. Best score 436 bits
Score difference with first non-orthologous sequence - O.cuniculus:436 P.jiroveci:436

G1U971              	100.00%		L0P6R7              	100.00%
Bootstrap support for G1U971 as seed ortholog is 100%.
Bootstrap support for L0P6R7 as seed ortholog is 100%.

Group of orthologs #269. Best score 435 bits
Score difference with first non-orthologous sequence - O.cuniculus:299 P.jiroveci:435

G1SD98              	100.00%		L0PFE7              	100.00%
Bootstrap support for G1SD98 as seed ortholog is 100%.
Bootstrap support for L0PFE7 as seed ortholog is 100%.

Group of orthologs #270. Best score 432 bits
Score difference with first non-orthologous sequence - O.cuniculus:432 P.jiroveci:432

G1SXN0              	100.00%		L0P9I4              	100.00%
Bootstrap support for G1SXN0 as seed ortholog is 100%.
Bootstrap support for L0P9I4 as seed ortholog is 100%.

Group of orthologs #271. Best score 431 bits
Score difference with first non-orthologous sequence - O.cuniculus:431 P.jiroveci:431

G1SFE4              	100.00%		L0PBL0              	100.00%
G1TQI5              	32.34%		
Bootstrap support for G1SFE4 as seed ortholog is 100%.
Bootstrap support for L0PBL0 as seed ortholog is 100%.

Group of orthologs #272. Best score 429 bits
Score difference with first non-orthologous sequence - O.cuniculus:251 P.jiroveci:429

G1U4L6              	100.00%		L0P6W8              	100.00%
                    	       		L0PH46              	100.00%
Bootstrap support for G1U4L6 as seed ortholog is 100%.
Bootstrap support for L0P6W8 as seed ortholog is 100%.
Bootstrap support for L0PH46 as seed ortholog is 100%.

Group of orthologs #273. Best score 429 bits
Score difference with first non-orthologous sequence - O.cuniculus:131 P.jiroveci:132

G1SMM5              	100.00%		L0PGJ9              	100.00%
Bootstrap support for G1SMM5 as seed ortholog is 99%.
Bootstrap support for L0PGJ9 as seed ortholog is 99%.

Group of orthologs #274. Best score 427 bits
Score difference with first non-orthologous sequence - O.cuniculus:427 P.jiroveci:427

G1SPS6              	100.00%		L0P9J7              	100.00%
Bootstrap support for G1SPS6 as seed ortholog is 100%.
Bootstrap support for L0P9J7 as seed ortholog is 100%.

Group of orthologs #275. Best score 427 bits
Score difference with first non-orthologous sequence - O.cuniculus:269 P.jiroveci:277

G1U3H6              	100.00%		L0PC98              	100.00%
Bootstrap support for G1U3H6 as seed ortholog is 100%.
Bootstrap support for L0PC98 as seed ortholog is 100%.

Group of orthologs #276. Best score 426 bits
Score difference with first non-orthologous sequence - O.cuniculus:329 P.jiroveci:426

G1SY96              	100.00%		L0PF52              	100.00%
G1T2J6              	62.31%		
Bootstrap support for G1SY96 as seed ortholog is 100%.
Bootstrap support for L0PF52 as seed ortholog is 100%.

Group of orthologs #277. Best score 426 bits
Score difference with first non-orthologous sequence - O.cuniculus:381 P.jiroveci:426

G1T534              	100.00%		L0P9V7              	100.00%
G1TZQ5              	34.42%		
Bootstrap support for G1T534 as seed ortholog is 100%.
Bootstrap support for L0P9V7 as seed ortholog is 100%.

Group of orthologs #278. Best score 426 bits
Score difference with first non-orthologous sequence - O.cuniculus:193 P.jiroveci:87

G1SX32              	100.00%		L0PFS3              	100.00%
Bootstrap support for G1SX32 as seed ortholog is 100%.
Bootstrap support for L0PFS3 as seed ortholog is 99%.

Group of orthologs #279. Best score 425 bits
Score difference with first non-orthologous sequence - O.cuniculus:173 P.jiroveci:425

G1U2R1              	100.00%		L0PGN1              	100.00%
G1T5I3              	11.17%		
Bootstrap support for G1U2R1 as seed ortholog is 99%.
Bootstrap support for L0PGN1 as seed ortholog is 100%.

Group of orthologs #280. Best score 425 bits
Score difference with first non-orthologous sequence - O.cuniculus:425 P.jiroveci:425

G1SQZ4              	100.00%		L0PGU0              	100.00%
Bootstrap support for G1SQZ4 as seed ortholog is 100%.
Bootstrap support for L0PGU0 as seed ortholog is 100%.

Group of orthologs #281. Best score 425 bits
Score difference with first non-orthologous sequence - O.cuniculus:154 P.jiroveci:425

G1TCT4              	100.00%		L0PFJ5              	100.00%
Bootstrap support for G1TCT4 as seed ortholog is 99%.
Bootstrap support for L0PFJ5 as seed ortholog is 100%.

Group of orthologs #282. Best score 424 bits
Score difference with first non-orthologous sequence - O.cuniculus:424 P.jiroveci:424

P11974              	100.00%		L0PEE3              	100.00%
G1T8G9              	49.92%		
Bootstrap support for P11974 as seed ortholog is 100%.
Bootstrap support for L0PEE3 as seed ortholog is 100%.

Group of orthologs #283. Best score 423 bits
Score difference with first non-orthologous sequence - O.cuniculus:423 P.jiroveci:423

G1SCP7              	100.00%		L0P6T8              	100.00%
G1SJM9              	53.86%		
G1TKE7              	48.01%		
Bootstrap support for G1SCP7 as seed ortholog is 100%.
Bootstrap support for L0P6T8 as seed ortholog is 100%.

Group of orthologs #284. Best score 423 bits
Score difference with first non-orthologous sequence - O.cuniculus:423 P.jiroveci:423

G1SYD3              	100.00%		L0PAH2              	100.00%
Bootstrap support for G1SYD3 as seed ortholog is 100%.
Bootstrap support for L0PAH2 as seed ortholog is 100%.

Group of orthologs #285. Best score 423 bits
Score difference with first non-orthologous sequence - O.cuniculus:349 P.jiroveci:423

G1TAF8              	100.00%		L0PAL8              	100.00%
Bootstrap support for G1TAF8 as seed ortholog is 100%.
Bootstrap support for L0PAL8 as seed ortholog is 100%.

Group of orthologs #286. Best score 421 bits
Score difference with first non-orthologous sequence - O.cuniculus:421 P.jiroveci:421

P00949              	100.00%		L0PEE4              	100.00%
G1T6S2              	54.22%		
Bootstrap support for P00949 as seed ortholog is 100%.
Bootstrap support for L0PEE4 as seed ortholog is 100%.

Group of orthologs #287. Best score 421 bits
Score difference with first non-orthologous sequence - O.cuniculus:421 P.jiroveci:421

G1SFV7              	100.00%		L0P8X3              	100.00%
Bootstrap support for G1SFV7 as seed ortholog is 100%.
Bootstrap support for L0P8X3 as seed ortholog is 100%.

Group of orthologs #288. Best score 421 bits
Score difference with first non-orthologous sequence - O.cuniculus:234 P.jiroveci:421

G1T3N5              	100.00%		L0PGJ5              	100.00%
Bootstrap support for G1T3N5 as seed ortholog is 100%.
Bootstrap support for L0PGJ5 as seed ortholog is 100%.

Group of orthologs #289. Best score 420 bits
Score difference with first non-orthologous sequence - O.cuniculus:420 P.jiroveci:420

G1T8C2              	100.00%		L0PG82              	100.00%
Bootstrap support for G1T8C2 as seed ortholog is 100%.
Bootstrap support for L0PG82 as seed ortholog is 100%.

Group of orthologs #290. Best score 417 bits
Score difference with first non-orthologous sequence - O.cuniculus:417 P.jiroveci:417

G1SXS3              	100.00%		L0PBE9              	100.00%
Bootstrap support for G1SXS3 as seed ortholog is 100%.
Bootstrap support for L0PBE9 as seed ortholog is 100%.

Group of orthologs #291. Best score 415 bits
Score difference with first non-orthologous sequence - O.cuniculus:100 P.jiroveci:309

Q29502              	100.00%		L0PAN3              	100.00%
G1SS86              	100.00%		L0PE81              	100.00%
G1SZI2              	55.08%		
Bootstrap support for Q29502 as seed ortholog is 99%.
Bootstrap support for G1SS86 as seed ortholog is 97%.
Bootstrap support for L0PAN3 as seed ortholog is 100%.
Bootstrap support for L0PE81 as seed ortholog is 100%.

Group of orthologs #292. Best score 415 bits
Score difference with first non-orthologous sequence - O.cuniculus:260 P.jiroveci:415

G1SM15              	100.00%		L0PA15              	100.00%
G1TZT2              	96.46%		
Bootstrap support for G1SM15 as seed ortholog is 100%.
Bootstrap support for L0PA15 as seed ortholog is 100%.

Group of orthologs #293. Best score 415 bits
Score difference with first non-orthologous sequence - O.cuniculus:415 P.jiroveci:415

G1SKD9              	100.00%		L0PGA8              	100.00%
Bootstrap support for G1SKD9 as seed ortholog is 100%.
Bootstrap support for L0PGA8 as seed ortholog is 100%.

Group of orthologs #294. Best score 414 bits
Score difference with first non-orthologous sequence - O.cuniculus:414 P.jiroveci:358

G1SEJ4              	100.00%		L0P7M4              	100.00%
G1TQ38              	68.94%		L0PH62              	49.16%
Bootstrap support for G1SEJ4 as seed ortholog is 100%.
Bootstrap support for L0P7M4 as seed ortholog is 100%.

Group of orthologs #295. Best score 414 bits
Score difference with first non-orthologous sequence - O.cuniculus:253 P.jiroveci:278

G1SI33              	100.00%		L0PDA0              	100.00%
Bootstrap support for G1SI33 as seed ortholog is 100%.
Bootstrap support for L0PDA0 as seed ortholog is 100%.

Group of orthologs #296. Best score 411 bits
Score difference with first non-orthologous sequence - O.cuniculus:411 P.jiroveci:411

G1U3U8              	100.00%		L0PDM0              	100.00%
G1TP76              	46.59%		
Bootstrap support for G1U3U8 as seed ortholog is 100%.
Bootstrap support for L0PDM0 as seed ortholog is 100%.

Group of orthologs #297. Best score 411 bits
Score difference with first non-orthologous sequence - O.cuniculus:411 P.jiroveci:411

G1T9A9              	100.00%		L0PEX5              	100.00%
Bootstrap support for G1T9A9 as seed ortholog is 100%.
Bootstrap support for L0PEX5 as seed ortholog is 100%.

Group of orthologs #298. Best score 410 bits
Score difference with first non-orthologous sequence - O.cuniculus:111 P.jiroveci:410

G1SMV0              	100.00%		L0PFB1              	100.00%
G1SEA7              	56.81%		
Bootstrap support for G1SMV0 as seed ortholog is 99%.
Bootstrap support for L0PFB1 as seed ortholog is 100%.

Group of orthologs #299. Best score 410 bits
Score difference with first non-orthologous sequence - O.cuniculus:252 P.jiroveci:410

G1T9V1              	100.00%		L0PDT0              	100.00%
G1U529              	13.64%		
Bootstrap support for G1T9V1 as seed ortholog is 100%.
Bootstrap support for L0PDT0 as seed ortholog is 100%.

Group of orthologs #300. Best score 410 bits
Score difference with first non-orthologous sequence - O.cuniculus:410 P.jiroveci:410

G1SR16              	100.00%		L0P7S7              	100.00%
Bootstrap support for G1SR16 as seed ortholog is 100%.
Bootstrap support for L0P7S7 as seed ortholog is 100%.

Group of orthologs #301. Best score 410 bits
Score difference with first non-orthologous sequence - O.cuniculus:410 P.jiroveci:223

G1T373              	100.00%		L0P6V9              	100.00%
Bootstrap support for G1T373 as seed ortholog is 100%.
Bootstrap support for L0P6V9 as seed ortholog is 100%.

Group of orthologs #302. Best score 408 bits
Score difference with first non-orthologous sequence - O.cuniculus:408 P.jiroveci:408

G1TJA4              	100.00%		L0PIC6              	100.00%
Bootstrap support for G1TJA4 as seed ortholog is 100%.
Bootstrap support for L0PIC6 as seed ortholog is 100%.

Group of orthologs #303. Best score 407 bits
Score difference with first non-orthologous sequence - O.cuniculus:407 P.jiroveci:407

G1SVA3              	100.00%		L0PAN7              	100.00%
Bootstrap support for G1SVA3 as seed ortholog is 100%.
Bootstrap support for L0PAN7 as seed ortholog is 100%.

Group of orthologs #304. Best score 406 bits
Score difference with first non-orthologous sequence - O.cuniculus:193 P.jiroveci:406

G1T5R2              	100.00%		L0PBF6              	100.00%
G1SVD6              	40.63%		
Bootstrap support for G1T5R2 as seed ortholog is 100%.
Bootstrap support for L0PBF6 as seed ortholog is 100%.

Group of orthologs #305. Best score 406 bits
Score difference with first non-orthologous sequence - O.cuniculus:10 P.jiroveci:92

G1T7L9              	100.00%		L0PAY3              	100.00%
G1U4R9              	18.80%		
Bootstrap support for G1T7L9 as seed ortholog is 62%.
Alternative seed ortholog is G1SIH0 (10 bits away from this cluster)
Bootstrap support for L0PAY3 as seed ortholog is 99%.

Group of orthologs #306. Best score 405 bits
Score difference with first non-orthologous sequence - O.cuniculus:308 P.jiroveci:405

G1STX3              	100.00%		L0PI36              	100.00%
Bootstrap support for G1STX3 as seed ortholog is 100%.
Bootstrap support for L0PI36 as seed ortholog is 100%.

Group of orthologs #307. Best score 404 bits
Score difference with first non-orthologous sequence - O.cuniculus:180 P.jiroveci:404

G1U6H0              	100.00%		L0P702              	100.00%
G1SRB3              	37.70%		
Bootstrap support for G1U6H0 as seed ortholog is 99%.
Bootstrap support for L0P702 as seed ortholog is 100%.

Group of orthologs #308. Best score 404 bits
Score difference with first non-orthologous sequence - O.cuniculus:404 P.jiroveci:404

G1TDQ9              	100.00%		L0P8Z3              	100.00%
Bootstrap support for G1TDQ9 as seed ortholog is 100%.
Bootstrap support for L0P8Z3 as seed ortholog is 100%.

Group of orthologs #309. Best score 404 bits
Score difference with first non-orthologous sequence - O.cuniculus:120 P.jiroveci:404

G1T9S4              	100.00%		L0PCP3              	100.00%
Bootstrap support for G1T9S4 as seed ortholog is 99%.
Bootstrap support for L0PCP3 as seed ortholog is 100%.

Group of orthologs #310. Best score 402 bits
Score difference with first non-orthologous sequence - O.cuniculus:263 P.jiroveci:402

G1SFE0              	100.00%		L0PCN1              	100.00%
Bootstrap support for G1SFE0 as seed ortholog is 100%.
Bootstrap support for L0PCN1 as seed ortholog is 100%.

Group of orthologs #311. Best score 402 bits
Score difference with first non-orthologous sequence - O.cuniculus:163 P.jiroveci:402

G1SH85              	100.00%		L0PBM9              	100.00%
Bootstrap support for G1SH85 as seed ortholog is 99%.
Bootstrap support for L0PBM9 as seed ortholog is 100%.

Group of orthologs #312. Best score 402 bits
Score difference with first non-orthologous sequence - O.cuniculus:125 P.jiroveci:402

G1T8L4              	100.00%		L0PCL4              	100.00%
Bootstrap support for G1T8L4 as seed ortholog is 99%.
Bootstrap support for L0PCL4 as seed ortholog is 100%.

Group of orthologs #313. Best score 401 bits
Score difference with first non-orthologous sequence - O.cuniculus:401 P.jiroveci:401

G1TXF8              	100.00%		L0PFY1              	100.00%
G1TGN8              	16.96%		
Bootstrap support for G1TXF8 as seed ortholog is 100%.
Bootstrap support for L0PFY1 as seed ortholog is 100%.

Group of orthologs #314. Best score 401 bits
Score difference with first non-orthologous sequence - O.cuniculus:273 P.jiroveci:401

G1SCW7              	100.00%		L0P6U6              	100.00%
Bootstrap support for G1SCW7 as seed ortholog is 100%.
Bootstrap support for L0P6U6 as seed ortholog is 100%.

Group of orthologs #315. Best score 400 bits
Score difference with first non-orthologous sequence - O.cuniculus:229 P.jiroveci:400

G1STZ4              	100.00%		L0PG48              	100.00%
Bootstrap support for G1STZ4 as seed ortholog is 100%.
Bootstrap support for L0PG48 as seed ortholog is 100%.

Group of orthologs #316. Best score 399 bits
Score difference with first non-orthologous sequence - O.cuniculus:399 P.jiroveci:399

G1T1H0              	100.00%		L0PE98              	100.00%
G1TJ85              	55.91%		
G1SMW9              	40.62%		
Bootstrap support for G1T1H0 as seed ortholog is 100%.
Bootstrap support for L0PE98 as seed ortholog is 100%.

Group of orthologs #317. Best score 399 bits
Score difference with first non-orthologous sequence - O.cuniculus:277 P.jiroveci:310

G1SN37              	100.00%		L0PA57              	100.00%
Bootstrap support for G1SN37 as seed ortholog is 100%.
Bootstrap support for L0PA57 as seed ortholog is 100%.

Group of orthologs #318. Best score 399 bits
Score difference with first non-orthologous sequence - O.cuniculus:399 P.jiroveci:399

G1T2N8              	100.00%		L0PAB3              	100.00%
Bootstrap support for G1T2N8 as seed ortholog is 100%.
Bootstrap support for L0PAB3 as seed ortholog is 100%.

Group of orthologs #319. Best score 398 bits
Score difference with first non-orthologous sequence - O.cuniculus:398 P.jiroveci:398

G1TVL5              	100.00%		L0PCQ7              	100.00%
Bootstrap support for G1TVL5 as seed ortholog is 100%.
Bootstrap support for L0PCQ7 as seed ortholog is 100%.

Group of orthologs #320. Best score 396 bits
Score difference with first non-orthologous sequence - O.cuniculus:396 P.jiroveci:396

G1SNU8              	100.00%		L0PAM5              	100.00%
G1TQD3              	22.63%		
Bootstrap support for G1SNU8 as seed ortholog is 100%.
Bootstrap support for L0PAM5 as seed ortholog is 100%.

Group of orthologs #321. Best score 393 bits
Score difference with first non-orthologous sequence - O.cuniculus:393 P.jiroveci:393

G1SQV5              	100.00%		L0PCV8              	100.00%
Bootstrap support for G1SQV5 as seed ortholog is 100%.
Bootstrap support for L0PCV8 as seed ortholog is 100%.

Group of orthologs #322. Best score 393 bits
Score difference with first non-orthologous sequence - O.cuniculus:291 P.jiroveci:393

G1SMY5              	100.00%		L0PFP2              	100.00%
Bootstrap support for G1SMY5 as seed ortholog is 100%.
Bootstrap support for L0PFP2 as seed ortholog is 100%.

Group of orthologs #323. Best score 392 bits
Score difference with first non-orthologous sequence - O.cuniculus:392 P.jiroveci:392

G1TN22              	100.00%		L0PAH9              	100.00%
                    	       		L0PAZ7              	30.31%
Bootstrap support for G1TN22 as seed ortholog is 100%.
Bootstrap support for L0PAH9 as seed ortholog is 100%.

Group of orthologs #324. Best score 392 bits
Score difference with first non-orthologous sequence - O.cuniculus:392 P.jiroveci:392

G1TA59              	100.00%		L0PB68              	100.00%
Bootstrap support for G1TA59 as seed ortholog is 100%.
Bootstrap support for L0PB68 as seed ortholog is 100%.

Group of orthologs #325. Best score 391 bits
Score difference with first non-orthologous sequence - O.cuniculus:391 P.jiroveci:391

G1SW00              	100.00%		L0PI13              	100.00%
Bootstrap support for G1SW00 as seed ortholog is 100%.
Bootstrap support for L0PI13 as seed ortholog is 100%.

Group of orthologs #326. Best score 391 bits
Score difference with first non-orthologous sequence - O.cuniculus:391 P.jiroveci:391

G1T515              	100.00%		L0PAI0              	100.00%
Bootstrap support for G1T515 as seed ortholog is 100%.
Bootstrap support for L0PAI0 as seed ortholog is 100%.

Group of orthologs #327. Best score 389 bits
Score difference with first non-orthologous sequence - O.cuniculus:285 P.jiroveci:243

G1SYT7              	100.00%		L0PBY2              	100.00%
G1SGP1              	24.71%		
Bootstrap support for G1SYT7 as seed ortholog is 100%.
Bootstrap support for L0PBY2 as seed ortholog is 100%.

Group of orthologs #328. Best score 388 bits
Score difference with first non-orthologous sequence - O.cuniculus:388 P.jiroveci:388

G1SV17              	100.00%		L0PEY9              	100.00%
Bootstrap support for G1SV17 as seed ortholog is 100%.
Bootstrap support for L0PEY9 as seed ortholog is 100%.

Group of orthologs #329. Best score 386 bits
Score difference with first non-orthologous sequence - O.cuniculus:386 P.jiroveci:179

G1T787              	100.00%		L0PBH6              	100.00%
G1TIY9              	49.21%		
G1SFZ6              	42.09%		
G1TI20              	40.35%		
Bootstrap support for G1T787 as seed ortholog is 100%.
Bootstrap support for L0PBH6 as seed ortholog is 100%.

Group of orthologs #330. Best score 386 bits
Score difference with first non-orthologous sequence - O.cuniculus:386 P.jiroveci:386

G1TT27              	100.00%		L0PID0              	100.00%
G1TZB5              	92.81%		
Bootstrap support for G1TT27 as seed ortholog is 100%.
Bootstrap support for L0PID0 as seed ortholog is 100%.

Group of orthologs #331. Best score 386 bits
Score difference with first non-orthologous sequence - O.cuniculus:386 P.jiroveci:386

G1SF00              	100.00%		L0PCT5              	100.00%
Bootstrap support for G1SF00 as seed ortholog is 100%.
Bootstrap support for L0PCT5 as seed ortholog is 100%.

Group of orthologs #332. Best score 385 bits
Score difference with first non-orthologous sequence - O.cuniculus:385 P.jiroveci:274

G1STL1              	100.00%		L0PFP6              	100.00%
Bootstrap support for G1STL1 as seed ortholog is 100%.
Bootstrap support for L0PFP6 as seed ortholog is 100%.

Group of orthologs #333. Best score 384 bits
Score difference with first non-orthologous sequence - O.cuniculus:133 P.jiroveci:384

G1STM7              	100.00%		L0PA26              	100.00%
Bootstrap support for G1STM7 as seed ortholog is 99%.
Bootstrap support for L0PA26 as seed ortholog is 100%.

Group of orthologs #334. Best score 383 bits
Score difference with first non-orthologous sequence - O.cuniculus:252 P.jiroveci:290

G1T8R1              	100.00%		L0P7Z7              	100.00%
Bootstrap support for G1T8R1 as seed ortholog is 100%.
Bootstrap support for L0P7Z7 as seed ortholog is 100%.

Group of orthologs #335. Best score 382 bits
Score difference with first non-orthologous sequence - O.cuniculus:303 P.jiroveci:382

G1T2L4              	100.00%		L0PG01              	100.00%
G1SV98              	31.06%		L0P7J0              	81.72%
Bootstrap support for G1T2L4 as seed ortholog is 100%.
Bootstrap support for L0PG01 as seed ortholog is 100%.

Group of orthologs #336. Best score 382 bits
Score difference with first non-orthologous sequence - O.cuniculus:382 P.jiroveci:382

G1SDV7              	100.00%		L0PGC4              	100.00%
Bootstrap support for G1SDV7 as seed ortholog is 100%.
Bootstrap support for L0PGC4 as seed ortholog is 100%.

Group of orthologs #337. Best score 381 bits
Score difference with first non-orthologous sequence - O.cuniculus:381 P.jiroveci:381

G1TWC4              	100.00%		L0P9G7              	100.00%
G1TDK8              	44.86%		
Bootstrap support for G1TWC4 as seed ortholog is 100%.
Bootstrap support for L0P9G7 as seed ortholog is 100%.

Group of orthologs #338. Best score 381 bits
Score difference with first non-orthologous sequence - O.cuniculus:172 P.jiroveci:381

P00389              	100.00%		L0P9R8              	100.00%
Bootstrap support for P00389 as seed ortholog is 99%.
Bootstrap support for L0P9R8 as seed ortholog is 100%.

Group of orthologs #339. Best score 380 bits
Score difference with first non-orthologous sequence - O.cuniculus:380 P.jiroveci:380

G1T0Z3              	100.00%		L0PEI4              	100.00%
Bootstrap support for G1T0Z3 as seed ortholog is 100%.
Bootstrap support for L0PEI4 as seed ortholog is 100%.

Group of orthologs #340. Best score 379 bits
Score difference with first non-orthologous sequence - O.cuniculus:379 P.jiroveci:379

G1TE16              	100.00%		L0PCR5              	100.00%
G1U5M1              	56.77%		L0P9C2              	56.28%
Bootstrap support for G1TE16 as seed ortholog is 100%.
Bootstrap support for L0PCR5 as seed ortholog is 100%.

Group of orthologs #341. Best score 379 bits
Score difference with first non-orthologous sequence - O.cuniculus:379 P.jiroveci:379

G1SNR2              	100.00%		L0P6U2              	100.00%
Bootstrap support for G1SNR2 as seed ortholog is 100%.
Bootstrap support for L0P6U2 as seed ortholog is 100%.

Group of orthologs #342. Best score 379 bits
Score difference with first non-orthologous sequence - O.cuniculus:244 P.jiroveci:379

G1SML0              	100.00%		L0PHI3              	100.00%
Bootstrap support for G1SML0 as seed ortholog is 100%.
Bootstrap support for L0PHI3 as seed ortholog is 100%.

Group of orthologs #343. Best score 379 bits
Score difference with first non-orthologous sequence - O.cuniculus:379 P.jiroveci:379

G1T719              	100.00%		L0PCH8              	100.00%
Bootstrap support for G1T719 as seed ortholog is 100%.
Bootstrap support for L0PCH8 as seed ortholog is 100%.

Group of orthologs #344. Best score 378 bits
Score difference with first non-orthologous sequence - O.cuniculus:378 P.jiroveci:378

G1ST90              	100.00%		L0PA23              	100.00%
Bootstrap support for G1ST90 as seed ortholog is 100%.
Bootstrap support for L0PA23 as seed ortholog is 100%.

Group of orthologs #345. Best score 378 bits
Score difference with first non-orthologous sequence - O.cuniculus:326 P.jiroveci:378

G1T4J1              	100.00%		L0PDW0              	100.00%
Bootstrap support for G1T4J1 as seed ortholog is 100%.
Bootstrap support for L0PDW0 as seed ortholog is 100%.

Group of orthologs #346. Best score 378 bits
Score difference with first non-orthologous sequence - O.cuniculus:378 P.jiroveci:378

G1T974              	100.00%		L0PHJ7              	100.00%
Bootstrap support for G1T974 as seed ortholog is 100%.
Bootstrap support for L0PHJ7 as seed ortholog is 100%.

Group of orthologs #347. Best score 375 bits
Score difference with first non-orthologous sequence - O.cuniculus:93 P.jiroveci:284

G1U840              	100.00%		L0PCW4              	100.00%
Bootstrap support for G1U840 as seed ortholog is 99%.
Bootstrap support for L0PCW4 as seed ortholog is 100%.

Group of orthologs #348. Best score 374 bits
Score difference with first non-orthologous sequence - O.cuniculus:374 P.jiroveci:374

G1TVA3              	100.00%		L0PDQ3              	100.00%
G1T0K9              	62.58%		
Bootstrap support for G1TVA3 as seed ortholog is 100%.
Bootstrap support for L0PDQ3 as seed ortholog is 100%.

Group of orthologs #349. Best score 374 bits
Score difference with first non-orthologous sequence - O.cuniculus:303 P.jiroveci:374

G1SZD1              	100.00%		L0P8G8              	100.00%
Bootstrap support for G1SZD1 as seed ortholog is 100%.
Bootstrap support for L0P8G8 as seed ortholog is 100%.

Group of orthologs #350. Best score 373 bits
Score difference with first non-orthologous sequence - O.cuniculus:373 P.jiroveci:373

G1SN62              	100.00%		L0PDI1              	100.00%
Bootstrap support for G1SN62 as seed ortholog is 100%.
Bootstrap support for L0PDI1 as seed ortholog is 100%.

Group of orthologs #351. Best score 373 bits
Score difference with first non-orthologous sequence - O.cuniculus:373 P.jiroveci:373

G1T6D0              	100.00%		L0PFY3              	100.00%
Bootstrap support for G1T6D0 as seed ortholog is 100%.
Bootstrap support for L0PFY3 as seed ortholog is 100%.

Group of orthologs #352. Best score 371 bits
Score difference with first non-orthologous sequence - O.cuniculus:266 P.jiroveci:371

G1SK32              	100.00%		L0P7P4              	100.00%
Bootstrap support for G1SK32 as seed ortholog is 100%.
Bootstrap support for L0P7P4 as seed ortholog is 100%.

Group of orthologs #353. Best score 370 bits
Score difference with first non-orthologous sequence - O.cuniculus:370 P.jiroveci:370

G1SHW1              	100.00%		L0PC90              	100.00%
Bootstrap support for G1SHW1 as seed ortholog is 100%.
Bootstrap support for L0PC90 as seed ortholog is 100%.

Group of orthologs #354. Best score 369 bits
Score difference with first non-orthologous sequence - O.cuniculus:22 P.jiroveci:369

G1T2F6              	100.00%		L0PH29              	100.00%
G1T865              	100.00%		
Bootstrap support for G1T2F6 as seed ortholog is 76%.
Bootstrap support for G1T865 as seed ortholog is 75%.
Bootstrap support for L0PH29 as seed ortholog is 100%.

Group of orthologs #355. Best score 369 bits
Score difference with first non-orthologous sequence - O.cuniculus:369 P.jiroveci:369

G1SKQ8              	100.00%		L0PCB2              	100.00%
Bootstrap support for G1SKQ8 as seed ortholog is 100%.
Bootstrap support for L0PCB2 as seed ortholog is 100%.

Group of orthologs #356. Best score 369 bits
Score difference with first non-orthologous sequence - O.cuniculus:192 P.jiroveci:369

G1SMP5              	100.00%		L0PCW8              	100.00%
Bootstrap support for G1SMP5 as seed ortholog is 99%.
Bootstrap support for L0PCW8 as seed ortholog is 100%.

Group of orthologs #357. Best score 369 bits
Score difference with first non-orthologous sequence - O.cuniculus:183 P.jiroveci:160

G1TMD8              	100.00%		L0PEA7              	100.00%
Bootstrap support for G1TMD8 as seed ortholog is 100%.
Bootstrap support for L0PEA7 as seed ortholog is 100%.

Group of orthologs #358. Best score 369 bits
Score difference with first non-orthologous sequence - O.cuniculus:267 P.jiroveci:369

G1U5Z3              	100.00%		L0PA88              	100.00%
Bootstrap support for G1U5Z3 as seed ortholog is 100%.
Bootstrap support for L0PA88 as seed ortholog is 100%.

Group of orthologs #359. Best score 368 bits
Score difference with first non-orthologous sequence - O.cuniculus:368 P.jiroveci:368

G1SMF3              	100.00%		L0PE52              	100.00%
                    	       		L0PIN5              	50.29%
Bootstrap support for G1SMF3 as seed ortholog is 100%.
Bootstrap support for L0PE52 as seed ortholog is 100%.

Group of orthologs #360. Best score 368 bits
Score difference with first non-orthologous sequence - O.cuniculus:368 P.jiroveci:368

G1TBT4              	100.00%		L0PEX9              	100.00%
G1SNL8              	68.69%		
Bootstrap support for G1TBT4 as seed ortholog is 100%.
Bootstrap support for L0PEX9 as seed ortholog is 100%.

Group of orthologs #361. Best score 368 bits
Score difference with first non-orthologous sequence - O.cuniculus:368 P.jiroveci:368

G1SMC8              	100.00%		L0P9B4              	100.00%
Bootstrap support for G1SMC8 as seed ortholog is 100%.
Bootstrap support for L0P9B4 as seed ortholog is 100%.

Group of orthologs #362. Best score 368 bits
Score difference with first non-orthologous sequence - O.cuniculus:368 P.jiroveci:368

G1SGJ5              	100.00%		L0PGF5              	100.00%
Bootstrap support for G1SGJ5 as seed ortholog is 100%.
Bootstrap support for L0PGF5 as seed ortholog is 100%.

Group of orthologs #363. Best score 368 bits
Score difference with first non-orthologous sequence - O.cuniculus:368 P.jiroveci:368

G1SKY2              	100.00%		L0PES3              	100.00%
Bootstrap support for G1SKY2 as seed ortholog is 100%.
Bootstrap support for L0PES3 as seed ortholog is 100%.

Group of orthologs #364. Best score 368 bits
Score difference with first non-orthologous sequence - O.cuniculus:301 P.jiroveci:368

G1SN15              	100.00%		L0PIR9              	100.00%
Bootstrap support for G1SN15 as seed ortholog is 100%.
Bootstrap support for L0PIR9 as seed ortholog is 100%.

Group of orthologs #365. Best score 368 bits
Score difference with first non-orthologous sequence - O.cuniculus:176 P.jiroveci:368

G1TNA6              	100.00%		L0PE19              	100.00%
Bootstrap support for G1TNA6 as seed ortholog is 100%.
Bootstrap support for L0PE19 as seed ortholog is 100%.

Group of orthologs #366. Best score 367 bits
Score difference with first non-orthologous sequence - O.cuniculus:68 P.jiroveci:201

G1T5Z7              	100.00%		L0P9Z0              	100.00%
G1T5Y1              	63.32%		
Bootstrap support for G1T5Z7 as seed ortholog is 96%.
Bootstrap support for L0P9Z0 as seed ortholog is 100%.

Group of orthologs #367. Best score 367 bits
Score difference with first non-orthologous sequence - O.cuniculus:367 P.jiroveci:367

G1SFK3              	100.00%		L0P8A6              	100.00%
Bootstrap support for G1SFK3 as seed ortholog is 100%.
Bootstrap support for L0P8A6 as seed ortholog is 100%.

Group of orthologs #368. Best score 366 bits
Score difference with first non-orthologous sequence - O.cuniculus:366 P.jiroveci:366

B7NZM4              	100.00%		L0PBA8              	100.00%
Bootstrap support for B7NZM4 as seed ortholog is 100%.
Bootstrap support for L0PBA8 as seed ortholog is 100%.

Group of orthologs #369. Best score 365 bits
Score difference with first non-orthologous sequence - O.cuniculus:227 P.jiroveci:220

G1SV90              	100.00%		L0P942              	100.00%
G1SSC4              	12.47%		L0P7J6              	59.07%
G1U4Y9              	10.35%		
Bootstrap support for G1SV90 as seed ortholog is 99%.
Bootstrap support for L0P942 as seed ortholog is 99%.

Group of orthologs #370. Best score 365 bits
Score difference with first non-orthologous sequence - O.cuniculus:365 P.jiroveci:365

G1T9U7              	100.00%		L0PBA9              	100.00%
Bootstrap support for G1T9U7 as seed ortholog is 100%.
Bootstrap support for L0PBA9 as seed ortholog is 100%.

Group of orthologs #371. Best score 364 bits
Score difference with first non-orthologous sequence - O.cuniculus:107 P.jiroveci:123

G1SXR6              	100.00%		L0PBU4              	100.00%
G1TMW4              	70.50%		
G1TDU0              	66.91%		
Bootstrap support for G1SXR6 as seed ortholog is 100%.
Bootstrap support for L0PBU4 as seed ortholog is 99%.

Group of orthologs #372. Best score 364 bits
Score difference with first non-orthologous sequence - O.cuniculus:127 P.jiroveci:74

G1SVW1              	100.00%		L0PA13              	100.00%
Bootstrap support for G1SVW1 as seed ortholog is 99%.
Bootstrap support for L0PA13 as seed ortholog is 93%.

Group of orthologs #373. Best score 363 bits
Score difference with first non-orthologous sequence - O.cuniculus:363 P.jiroveci:363

G1SWD1              	100.00%		L0PFQ8              	100.00%
G1STA9              	33.95%		
Bootstrap support for G1SWD1 as seed ortholog is 100%.
Bootstrap support for L0PFQ8 as seed ortholog is 100%.

Group of orthologs #374. Best score 363 bits
Score difference with first non-orthologous sequence - O.cuniculus:86 P.jiroveci:219

G1SSW2              	100.00%		L0PFK8              	100.00%
Bootstrap support for G1SSW2 as seed ortholog is 99%.
Bootstrap support for L0PFK8 as seed ortholog is 100%.

Group of orthologs #375. Best score 362 bits
Score difference with first non-orthologous sequence - O.cuniculus:236 P.jiroveci:362

G1SJF1              	100.00%		L0PG24              	100.00%
Bootstrap support for G1SJF1 as seed ortholog is 100%.
Bootstrap support for L0PG24 as seed ortholog is 100%.

Group of orthologs #376. Best score 362 bits
Score difference with first non-orthologous sequence - O.cuniculus:258 P.jiroveci:362

G1SR13              	100.00%		L0PDF2              	100.00%
Bootstrap support for G1SR13 as seed ortholog is 100%.
Bootstrap support for L0PDF2 as seed ortholog is 100%.

Group of orthologs #377. Best score 362 bits
Score difference with first non-orthologous sequence - O.cuniculus:205 P.jiroveci:362

G1T1M9              	100.00%		L0PFD9              	100.00%
Bootstrap support for G1T1M9 as seed ortholog is 100%.
Bootstrap support for L0PFD9 as seed ortholog is 100%.

Group of orthologs #378. Best score 362 bits
Score difference with first non-orthologous sequence - O.cuniculus:274 P.jiroveci:362

G1U479              	100.00%		L0PBI2              	100.00%
Bootstrap support for G1U479 as seed ortholog is 100%.
Bootstrap support for L0PBI2 as seed ortholog is 100%.

Group of orthologs #379. Best score 361 bits
Score difference with first non-orthologous sequence - O.cuniculus:283 P.jiroveci:288

G1SHS7              	100.00%		L0P7T8              	100.00%
Bootstrap support for G1SHS7 as seed ortholog is 100%.
Bootstrap support for L0P7T8 as seed ortholog is 100%.

Group of orthologs #380. Best score 361 bits
Score difference with first non-orthologous sequence - O.cuniculus:361 P.jiroveci:361

G1TW86              	100.00%		L0PAC7              	100.00%
Bootstrap support for G1TW86 as seed ortholog is 100%.
Bootstrap support for L0PAC7 as seed ortholog is 100%.

Group of orthologs #381. Best score 360 bits
Score difference with first non-orthologous sequence - O.cuniculus:360 P.jiroveci:360

G1SSR3              	100.00%		L0PEK9              	100.00%
Bootstrap support for G1SSR3 as seed ortholog is 100%.
Bootstrap support for L0PEK9 as seed ortholog is 100%.

Group of orthologs #382. Best score 359 bits
Score difference with first non-orthologous sequence - O.cuniculus:236 P.jiroveci:359

G1SY42              	100.00%		L0PD17              	100.00%
Bootstrap support for G1SY42 as seed ortholog is 100%.
Bootstrap support for L0PD17 as seed ortholog is 100%.

Group of orthologs #383. Best score 356 bits
Score difference with first non-orthologous sequence - O.cuniculus:356 P.jiroveci:356

G1T239              	100.00%		L0PBC5              	100.00%
G1SYX5              	37.92%		
Bootstrap support for G1T239 as seed ortholog is 100%.
Bootstrap support for L0PBC5 as seed ortholog is 100%.

Group of orthologs #384. Best score 356 bits
Score difference with first non-orthologous sequence - O.cuniculus:230 P.jiroveci:356

G1SMP1              	100.00%		L0PD24              	100.00%
Bootstrap support for G1SMP1 as seed ortholog is 99%.
Bootstrap support for L0PD24 as seed ortholog is 100%.

Group of orthologs #385. Best score 356 bits
Score difference with first non-orthologous sequence - O.cuniculus:107 P.jiroveci:133

G1ST86              	100.00%		L0PF10              	100.00%
Bootstrap support for G1ST86 as seed ortholog is 99%.
Bootstrap support for L0PF10 as seed ortholog is 99%.

Group of orthologs #386. Best score 354 bits
Score difference with first non-orthologous sequence - O.cuniculus:156 P.jiroveci:354

G1T1C1              	100.00%		L0P7X9              	100.00%
G1SN85              	31.42%		L0PBE2              	80.99%
G1TM04              	6.56%		
Bootstrap support for G1T1C1 as seed ortholog is 99%.
Bootstrap support for L0P7X9 as seed ortholog is 100%.

Group of orthologs #387. Best score 352 bits
Score difference with first non-orthologous sequence - O.cuniculus:197 P.jiroveci:352

G1T3S7              	100.00%		L0P9Y8              	100.00%
P45701              	37.42%		
G1U019              	19.07%		
Bootstrap support for G1T3S7 as seed ortholog is 99%.
Bootstrap support for L0P9Y8 as seed ortholog is 100%.

Group of orthologs #388. Best score 352 bits
Score difference with first non-orthologous sequence - O.cuniculus:57 P.jiroveci:352

G1SNN4              	100.00%		L0PB24              	100.00%
G1U3M5              	52.16%		
Bootstrap support for G1SNN4 as seed ortholog is 95%.
Bootstrap support for L0PB24 as seed ortholog is 100%.

Group of orthologs #389. Best score 351 bits
Score difference with first non-orthologous sequence - O.cuniculus:351 P.jiroveci:351

G1T9I3              	100.00%		L0PBX2              	100.00%
Bootstrap support for G1T9I3 as seed ortholog is 100%.
Bootstrap support for L0PBX2 as seed ortholog is 100%.

Group of orthologs #390. Best score 351 bits
Score difference with first non-orthologous sequence - O.cuniculus:351 P.jiroveci:351

G1TWK1              	100.00%		L0P9K4              	100.00%
Bootstrap support for G1TWK1 as seed ortholog is 100%.
Bootstrap support for L0P9K4 as seed ortholog is 100%.

Group of orthologs #391. Best score 351 bits
Score difference with first non-orthologous sequence - O.cuniculus:351 P.jiroveci:351

G1U2U9              	100.00%		L0P9B6              	100.00%
Bootstrap support for G1U2U9 as seed ortholog is 100%.
Bootstrap support for L0P9B6 as seed ortholog is 100%.

Group of orthologs #392. Best score 350 bits
Score difference with first non-orthologous sequence - O.cuniculus:261 P.jiroveci:350

G1T5R0              	100.00%		L0PB23              	100.00%
Bootstrap support for G1T5R0 as seed ortholog is 100%.
Bootstrap support for L0PB23 as seed ortholog is 100%.

Group of orthologs #393. Best score 350 bits
Score difference with first non-orthologous sequence - O.cuniculus:281 P.jiroveci:350

G1T6D4              	100.00%		L0PBQ1              	100.00%
Bootstrap support for G1T6D4 as seed ortholog is 100%.
Bootstrap support for L0PBQ1 as seed ortholog is 100%.

Group of orthologs #394. Best score 349 bits
Score difference with first non-orthologous sequence - O.cuniculus:349 P.jiroveci:349

G1SPH7              	100.00%		L0PBP4              	100.00%
Bootstrap support for G1SPH7 as seed ortholog is 100%.
Bootstrap support for L0PBP4 as seed ortholog is 100%.

Group of orthologs #395. Best score 347 bits
Score difference with first non-orthologous sequence - O.cuniculus:347 P.jiroveci:96

G1SN09              	100.00%		L0PD82              	100.00%
Bootstrap support for G1SN09 as seed ortholog is 100%.
Bootstrap support for L0PD82 as seed ortholog is 99%.

Group of orthologs #396. Best score 347 bits
Score difference with first non-orthologous sequence - O.cuniculus:347 P.jiroveci:347

G1U195              	100.00%		L0PF74              	100.00%
Bootstrap support for G1U195 as seed ortholog is 100%.
Bootstrap support for L0PF74 as seed ortholog is 100%.

Group of orthologs #397. Best score 346 bits
Score difference with first non-orthologous sequence - O.cuniculus:346 P.jiroveci:274

G1SJE3              	100.00%		L0PA00              	100.00%
Bootstrap support for G1SJE3 as seed ortholog is 100%.
Bootstrap support for L0PA00 as seed ortholog is 100%.

Group of orthologs #398. Best score 346 bits
Score difference with first non-orthologous sequence - O.cuniculus:111 P.jiroveci:175

G1T145              	100.00%		L0PCJ5              	100.00%
Bootstrap support for G1T145 as seed ortholog is 99%.
Bootstrap support for L0PCJ5 as seed ortholog is 99%.

Group of orthologs #399. Best score 346 bits
Score difference with first non-orthologous sequence - O.cuniculus:66 P.jiroveci:83

Q95216              	100.00%		L0PBP2              	100.00%
Bootstrap support for Q95216 as seed ortholog is 85%.
Bootstrap support for L0PBP2 as seed ortholog is 92%.

Group of orthologs #400. Best score 345 bits
Score difference with first non-orthologous sequence - O.cuniculus:345 P.jiroveci:246

G1STX8              	100.00%		L0P8W4              	100.00%
Bootstrap support for G1STX8 as seed ortholog is 100%.
Bootstrap support for L0P8W4 as seed ortholog is 99%.

Group of orthologs #401. Best score 344 bits
Score difference with first non-orthologous sequence - O.cuniculus:344 P.jiroveci:344

G1T225              	100.00%		L0PD18              	100.00%
Bootstrap support for G1T225 as seed ortholog is 100%.
Bootstrap support for L0PD18 as seed ortholog is 100%.

Group of orthologs #402. Best score 344 bits
Score difference with first non-orthologous sequence - O.cuniculus:254 P.jiroveci:344

G1TYU5              	100.00%		L0P7Z6              	100.00%
Bootstrap support for G1TYU5 as seed ortholog is 100%.
Bootstrap support for L0P7Z6 as seed ortholog is 100%.

Group of orthologs #403. Best score 343 bits
Score difference with first non-orthologous sequence - O.cuniculus:343 P.jiroveci:343

G1SUC8              	100.00%		L0P8R5              	100.00%
Bootstrap support for G1SUC8 as seed ortholog is 100%.
Bootstrap support for L0P8R5 as seed ortholog is 100%.

Group of orthologs #404. Best score 342 bits
Score difference with first non-orthologous sequence - O.cuniculus:342 P.jiroveci:342

G1SJS0              	100.00%		L0PED5              	100.00%
Bootstrap support for G1SJS0 as seed ortholog is 100%.
Bootstrap support for L0PED5 as seed ortholog is 100%.

Group of orthologs #405. Best score 342 bits
Score difference with first non-orthologous sequence - O.cuniculus:342 P.jiroveci:342

G1SMU4              	100.00%		L0PF30              	100.00%
Bootstrap support for G1SMU4 as seed ortholog is 100%.
Bootstrap support for L0PF30 as seed ortholog is 100%.

Group of orthologs #406. Best score 342 bits
Score difference with first non-orthologous sequence - O.cuniculus:342 P.jiroveci:342

G1SWD9              	100.00%		L0PC44              	100.00%
Bootstrap support for G1SWD9 as seed ortholog is 100%.
Bootstrap support for L0PC44 as seed ortholog is 100%.

Group of orthologs #407. Best score 342 bits
Score difference with first non-orthologous sequence - O.cuniculus:342 P.jiroveci:296

G1TDS3              	100.00%		L0PC30              	100.00%
Bootstrap support for G1TDS3 as seed ortholog is 100%.
Bootstrap support for L0PC30 as seed ortholog is 100%.

Group of orthologs #408. Best score 341 bits
Score difference with first non-orthologous sequence - O.cuniculus:220 P.jiroveci:341

G1SUL4              	100.00%		L0PF71              	100.00%
Bootstrap support for G1SUL4 as seed ortholog is 100%.
Bootstrap support for L0PF71 as seed ortholog is 100%.

Group of orthologs #409. Best score 340 bits
Score difference with first non-orthologous sequence - O.cuniculus:340 P.jiroveci:340

G1SJZ8              	100.00%		L0PD99              	100.00%
Bootstrap support for G1SJZ8 as seed ortholog is 100%.
Bootstrap support for L0PD99 as seed ortholog is 100%.

Group of orthologs #410. Best score 340 bits
Score difference with first non-orthologous sequence - O.cuniculus:340 P.jiroveci:340

G1TSL1              	100.00%		L0PCQ8              	100.00%
Bootstrap support for G1TSL1 as seed ortholog is 100%.
Bootstrap support for L0PCQ8 as seed ortholog is 100%.

Group of orthologs #411. Best score 339 bits
Score difference with first non-orthologous sequence - O.cuniculus:339 P.jiroveci:339

G1U998              	100.00%		L0P912              	100.00%
                    	       		L0P908              	89.38%
Bootstrap support for G1U998 as seed ortholog is 100%.
Bootstrap support for L0P912 as seed ortholog is 100%.

Group of orthologs #412. Best score 336 bits
Score difference with first non-orthologous sequence - O.cuniculus:77 P.jiroveci:336

G1T4H6              	100.00%		L0PBM5              	100.00%
G1SV07              	42.32%		
G1SFS5              	37.63%		
Bootstrap support for G1T4H6 as seed ortholog is 92%.
Bootstrap support for L0PBM5 as seed ortholog is 100%.

Group of orthologs #413. Best score 336 bits
Score difference with first non-orthologous sequence - O.cuniculus:336 P.jiroveci:169

G1SCZ4              	100.00%		L0P9F3              	100.00%
G1TST2              	16.58%		
Bootstrap support for G1SCZ4 as seed ortholog is 100%.
Bootstrap support for L0P9F3 as seed ortholog is 99%.

Group of orthologs #414. Best score 336 bits
Score difference with first non-orthologous sequence - O.cuniculus:336 P.jiroveci:336

G1SFU7              	100.00%		L0PBN2              	100.00%
Bootstrap support for G1SFU7 as seed ortholog is 100%.
Bootstrap support for L0PBN2 as seed ortholog is 100%.

Group of orthologs #415. Best score 336 bits
Score difference with first non-orthologous sequence - O.cuniculus:336 P.jiroveci:336

G1SNV4              	100.00%		L0PF46              	100.00%
Bootstrap support for G1SNV4 as seed ortholog is 100%.
Bootstrap support for L0PF46 as seed ortholog is 100%.

Group of orthologs #416. Best score 335 bits
Score difference with first non-orthologous sequence - O.cuniculus:335 P.jiroveci:335

G1TD39              	100.00%		L0PB54              	100.00%
G1SDW3              	54.17%		
Bootstrap support for G1TD39 as seed ortholog is 100%.
Bootstrap support for L0PB54 as seed ortholog is 100%.

Group of orthologs #417. Best score 334 bits
Score difference with first non-orthologous sequence - O.cuniculus:334 P.jiroveci:334

G1SYJ6              	100.00%		L0PA42              	100.00%
G1SZF4              	98.14%		
G1SZ30              	95.91%		
Bootstrap support for G1SYJ6 as seed ortholog is 100%.
Bootstrap support for L0PA42 as seed ortholog is 100%.

Group of orthologs #418. Best score 334 bits
Score difference with first non-orthologous sequence - O.cuniculus:334 P.jiroveci:276

G1T6U4              	100.00%		L0P7R5              	100.00%
Bootstrap support for G1T6U4 as seed ortholog is 100%.
Bootstrap support for L0P7R5 as seed ortholog is 100%.

Group of orthologs #419. Best score 332 bits
Score difference with first non-orthologous sequence - O.cuniculus:332 P.jiroveci:332

G1T3H3              	100.00%		L0P7N5              	100.00%
Bootstrap support for G1T3H3 as seed ortholog is 100%.
Bootstrap support for L0P7N5 as seed ortholog is 100%.

Group of orthologs #420. Best score 332 bits
Score difference with first non-orthologous sequence - O.cuniculus:332 P.jiroveci:332

G1U1G7              	100.00%		L0PF92              	100.00%
Bootstrap support for G1U1G7 as seed ortholog is 100%.
Bootstrap support for L0PF92 as seed ortholog is 100%.

Group of orthologs #421. Best score 331 bits
Score difference with first non-orthologous sequence - O.cuniculus:176 P.jiroveci:331

G1T9T5              	100.00%		L0PC17              	100.00%
                    	       		L0PD22              	50.86%
Bootstrap support for G1T9T5 as seed ortholog is 100%.
Bootstrap support for L0PC17 as seed ortholog is 100%.

Group of orthologs #422. Best score 330 bits
Score difference with first non-orthologous sequence - O.cuniculus:330 P.jiroveci:330

G1SFI4              	100.00%		L0PBZ7              	100.00%
Bootstrap support for G1SFI4 as seed ortholog is 100%.
Bootstrap support for L0PBZ7 as seed ortholog is 100%.

Group of orthologs #423. Best score 330 bits
Score difference with first non-orthologous sequence - O.cuniculus:330 P.jiroveci:330

G1TVY8              	100.00%		L0P8J2              	100.00%
Bootstrap support for G1TVY8 as seed ortholog is 100%.
Bootstrap support for L0P8J2 as seed ortholog is 100%.

Group of orthologs #424. Best score 329 bits
Score difference with first non-orthologous sequence - O.cuniculus:40 P.jiroveci:329

G1SIJ2              	100.00%		L0PA09              	100.00%
Bootstrap support for G1SIJ2 as seed ortholog is 88%.
Bootstrap support for L0PA09 as seed ortholog is 100%.

Group of orthologs #425. Best score 328 bits
Score difference with first non-orthologous sequence - O.cuniculus:260 P.jiroveci:328

G1SRX0              	100.00%		L0PB00              	100.00%
Bootstrap support for G1SRX0 as seed ortholog is 100%.
Bootstrap support for L0PB00 as seed ortholog is 100%.

Group of orthologs #426. Best score 328 bits
Score difference with first non-orthologous sequence - O.cuniculus:328 P.jiroveci:328

G1SX40              	100.00%		L0PCY9              	100.00%
Bootstrap support for G1SX40 as seed ortholog is 100%.
Bootstrap support for L0PCY9 as seed ortholog is 100%.

Group of orthologs #427. Best score 328 bits
Score difference with first non-orthologous sequence - O.cuniculus:328 P.jiroveci:328

G1SV27              	100.00%		L0PF98              	100.00%
Bootstrap support for G1SV27 as seed ortholog is 100%.
Bootstrap support for L0PF98 as seed ortholog is 100%.

Group of orthologs #428. Best score 327 bits
Score difference with first non-orthologous sequence - O.cuniculus:327 P.jiroveci:327

G1SRX1              	100.00%		L0PAL9              	100.00%
G1TEE3              	100.00%		L0PBY7              	41.13%
G1U0U3              	50.97%		
Bootstrap support for G1SRX1 as seed ortholog is 100%.
Bootstrap support for G1TEE3 as seed ortholog is 100%.
Bootstrap support for L0PAL9 as seed ortholog is 100%.

Group of orthologs #429. Best score 327 bits
Score difference with first non-orthologous sequence - O.cuniculus:181 P.jiroveci:327

G1TAW7              	100.00%		L0P8R8              	100.00%
Bootstrap support for G1TAW7 as seed ortholog is 99%.
Bootstrap support for L0P8R8 as seed ortholog is 100%.

Group of orthologs #430. Best score 326 bits
Score difference with first non-orthologous sequence - O.cuniculus:326 P.jiroveci:326

G1TP15              	100.00%		L0P8N3              	100.00%
Bootstrap support for G1TP15 as seed ortholog is 100%.
Bootstrap support for L0P8N3 as seed ortholog is 100%.

Group of orthologs #431. Best score 324 bits
Score difference with first non-orthologous sequence - O.cuniculus:65 P.jiroveci:324

G1TT89              	100.00%		L0PBD0              	100.00%
G1T345              	39.12%		
Bootstrap support for G1TT89 as seed ortholog is 81%.
Bootstrap support for L0PBD0 as seed ortholog is 100%.

Group of orthologs #432. Best score 324 bits
Score difference with first non-orthologous sequence - O.cuniculus:190 P.jiroveci:171

G1SHW6              	100.00%		L0PBM6              	100.00%
Bootstrap support for G1SHW6 as seed ortholog is 99%.
Bootstrap support for L0PBM6 as seed ortholog is 99%.

Group of orthologs #433. Best score 323 bits
Score difference with first non-orthologous sequence - O.cuniculus:323 P.jiroveci:323

G1TDF3              	100.00%		L0PBY3              	100.00%
G1STX9              	27.47%		
Bootstrap support for G1TDF3 as seed ortholog is 100%.
Bootstrap support for L0PBY3 as seed ortholog is 100%.

Group of orthologs #434. Best score 322 bits
Score difference with first non-orthologous sequence - O.cuniculus:322 P.jiroveci:322

G1TDY4              	100.00%		L0PEB2              	100.00%
Bootstrap support for G1TDY4 as seed ortholog is 100%.
Bootstrap support for L0PEB2 as seed ortholog is 100%.

Group of orthologs #435. Best score 322 bits
Score difference with first non-orthologous sequence - O.cuniculus:322 P.jiroveci:322

G1U5U0              	100.00%		L0PBB7              	100.00%
Bootstrap support for G1U5U0 as seed ortholog is 100%.
Bootstrap support for L0PBB7 as seed ortholog is 100%.

Group of orthologs #436. Best score 319 bits
Score difference with first non-orthologous sequence - O.cuniculus:176 P.jiroveci:319

G1SLD5              	100.00%		L0P983              	100.00%
Bootstrap support for G1SLD5 as seed ortholog is 99%.
Bootstrap support for L0P983 as seed ortholog is 100%.

Group of orthologs #437. Best score 319 bits
Score difference with first non-orthologous sequence - O.cuniculus:319 P.jiroveci:319

G1SY16              	100.00%		L0PCU5              	100.00%
Bootstrap support for G1SY16 as seed ortholog is 100%.
Bootstrap support for L0PCU5 as seed ortholog is 100%.

Group of orthologs #438. Best score 318 bits
Score difference with first non-orthologous sequence - O.cuniculus:318 P.jiroveci:318

G1SIJ8              	100.00%		L0PBT3              	100.00%
Bootstrap support for G1SIJ8 as seed ortholog is 100%.
Bootstrap support for L0PBT3 as seed ortholog is 100%.

Group of orthologs #439. Best score 318 bits
Score difference with first non-orthologous sequence - O.cuniculus:318 P.jiroveci:318

G1TBS2              	100.00%		L0PCK3              	100.00%
Bootstrap support for G1TBS2 as seed ortholog is 100%.
Bootstrap support for L0PCK3 as seed ortholog is 100%.

Group of orthologs #440. Best score 317 bits
Score difference with first non-orthologous sequence - O.cuniculus:139 P.jiroveci:317

G1TK17              	100.00%		L0PCG4              	100.00%
G1TTD6              	100.00%		
G1TA47              	82.19%		
Bootstrap support for G1TK17 as seed ortholog is 100%.
Bootstrap support for G1TTD6 as seed ortholog is 99%.
Bootstrap support for L0PCG4 as seed ortholog is 100%.

Group of orthologs #441. Best score 317 bits
Score difference with first non-orthologous sequence - O.cuniculus:30 P.jiroveci:317

G1SN06              	100.00%		L0PGR0              	100.00%
G1T8H1              	57.22%		
Bootstrap support for G1SN06 as seed ortholog is 70%.
Alternative seed ortholog is B7NZK5 (30 bits away from this cluster)
Bootstrap support for L0PGR0 as seed ortholog is 100%.

Group of orthologs #442. Best score 317 bits
Score difference with first non-orthologous sequence - O.cuniculus:99 P.jiroveci:317

G1SZ58              	100.00%		L0P891              	100.00%
Bootstrap support for G1SZ58 as seed ortholog is 99%.
Bootstrap support for L0P891 as seed ortholog is 100%.

Group of orthologs #443. Best score 317 bits
Score difference with first non-orthologous sequence - O.cuniculus:317 P.jiroveci:317

G1TDL5              	100.00%		L0P9G9              	100.00%
Bootstrap support for G1TDL5 as seed ortholog is 100%.
Bootstrap support for L0P9G9 as seed ortholog is 100%.

Group of orthologs #444. Best score 316 bits
Score difference with first non-orthologous sequence - O.cuniculus:316 P.jiroveci:316

G1T2G6              	100.00%		L0PEM6              	100.00%
G1STV8              	72.11%		
G1SMM2              	70.09%		
Bootstrap support for G1T2G6 as seed ortholog is 100%.
Bootstrap support for L0PEM6 as seed ortholog is 100%.

Group of orthologs #445. Best score 316 bits
Score difference with first non-orthologous sequence - O.cuniculus:316 P.jiroveci:316

G1SVL8              	100.00%		L0PA65              	100.00%
Bootstrap support for G1SVL8 as seed ortholog is 100%.
Bootstrap support for L0PA65 as seed ortholog is 100%.

Group of orthologs #446. Best score 316 bits
Score difference with first non-orthologous sequence - O.cuniculus:235 P.jiroveci:316

G1SVT4              	100.00%		L0PDL9              	100.00%
Bootstrap support for G1SVT4 as seed ortholog is 100%.
Bootstrap support for L0PDL9 as seed ortholog is 100%.

Group of orthologs #447. Best score 315 bits
Score difference with first non-orthologous sequence - O.cuniculus:169 P.jiroveci:78

G1SUT7              	100.00%		L0PB70              	100.00%
G1SUZ0              	20.98%		
G1TFZ6              	7.80%		
Bootstrap support for G1SUT7 as seed ortholog is 99%.
Bootstrap support for L0PB70 as seed ortholog is 99%.

Group of orthologs #448. Best score 313 bits
Score difference with first non-orthologous sequence - O.cuniculus:313 P.jiroveci:313

G1SUM3              	100.00%		L0PAU5              	100.00%
Bootstrap support for G1SUM3 as seed ortholog is 100%.
Bootstrap support for L0PAU5 as seed ortholog is 100%.

Group of orthologs #449. Best score 312 bits
Score difference with first non-orthologous sequence - O.cuniculus:312 P.jiroveci:312

G1SXI1              	100.00%		L0PD41              	100.00%
Bootstrap support for G1SXI1 as seed ortholog is 100%.
Bootstrap support for L0PD41 as seed ortholog is 100%.

Group of orthologs #450. Best score 312 bits
Score difference with first non-orthologous sequence - O.cuniculus:156 P.jiroveci:85

G1T7S2              	100.00%		L0PA63              	100.00%
Bootstrap support for G1T7S2 as seed ortholog is 99%.
Bootstrap support for L0PA63 as seed ortholog is 85%.

Group of orthologs #451. Best score 312 bits
Score difference with first non-orthologous sequence - O.cuniculus:312 P.jiroveci:225

G1TVW5              	100.00%		L0P8N0              	100.00%
Bootstrap support for G1TVW5 as seed ortholog is 100%.
Bootstrap support for L0P8N0 as seed ortholog is 100%.

Group of orthologs #452. Best score 311 bits
Score difference with first non-orthologous sequence - O.cuniculus:311 P.jiroveci:311

G1T3W9              	100.00%		L0PGL6              	100.00%
Bootstrap support for G1T3W9 as seed ortholog is 100%.
Bootstrap support for L0PGL6 as seed ortholog is 100%.

Group of orthologs #453. Best score 311 bits
Score difference with first non-orthologous sequence - O.cuniculus:311 P.jiroveci:311

G1T7Y5              	100.00%		L0PD68              	100.00%
Bootstrap support for G1T7Y5 as seed ortholog is 100%.
Bootstrap support for L0PD68 as seed ortholog is 100%.

Group of orthologs #454. Best score 311 bits
Score difference with first non-orthologous sequence - O.cuniculus:311 P.jiroveci:311

G1U115              	100.00%		L0PC62              	100.00%
Bootstrap support for G1U115 as seed ortholog is 100%.
Bootstrap support for L0PC62 as seed ortholog is 100%.

Group of orthologs #455. Best score 310 bits
Score difference with first non-orthologous sequence - O.cuniculus:46 P.jiroveci:131

G1U978              	100.00%		L0P6X2              	100.00%
G1SYB4              	82.93%		
Bootstrap support for G1U978 as seed ortholog is 95%.
Bootstrap support for L0P6X2 as seed ortholog is 99%.

Group of orthologs #456. Best score 309 bits
Score difference with first non-orthologous sequence - O.cuniculus:309 P.jiroveci:309

G1SK77              	100.00%		L0PFG1              	100.00%
Bootstrap support for G1SK77 as seed ortholog is 100%.
Bootstrap support for L0PFG1 as seed ortholog is 100%.

Group of orthologs #457. Best score 308 bits
Score difference with first non-orthologous sequence - O.cuniculus:211 P.jiroveci:308

G1T9J0              	100.00%		L0PAG0              	100.00%
B7NZQ2              	87.86%		
G1T117              	82.86%		
G1U2A1              	78.57%		
Bootstrap support for G1T9J0 as seed ortholog is 100%.
Bootstrap support for L0PAG0 as seed ortholog is 100%.

Group of orthologs #458. Best score 308 bits
Score difference with first non-orthologous sequence - O.cuniculus:308 P.jiroveci:308

G1U7B2              	100.00%		L0PBD2              	100.00%
Bootstrap support for G1U7B2 as seed ortholog is 100%.
Bootstrap support for L0PBD2 as seed ortholog is 100%.

Group of orthologs #459. Best score 307 bits
Score difference with first non-orthologous sequence - O.cuniculus:307 P.jiroveci:307

G1SKS0              	100.00%		L0PAP4              	100.00%
G1TVH9              	47.84%		
G1TRU3              	45.89%		
Bootstrap support for G1SKS0 as seed ortholog is 100%.
Bootstrap support for L0PAP4 as seed ortholog is 100%.

Group of orthologs #460. Best score 307 bits
Score difference with first non-orthologous sequence - O.cuniculus:307 P.jiroveci:307

G1TNM3              	100.00%		L0P9X4              	100.00%
G1TG00              	81.71%		
Bootstrap support for G1TNM3 as seed ortholog is 100%.
Bootstrap support for L0P9X4 as seed ortholog is 100%.

Group of orthologs #461. Best score 307 bits
Score difference with first non-orthologous sequence - O.cuniculus:307 P.jiroveci:307

G1STW7              	100.00%		L0P9X7              	100.00%
Bootstrap support for G1STW7 as seed ortholog is 100%.
Bootstrap support for L0P9X7 as seed ortholog is 100%.

Group of orthologs #462. Best score 306 bits
Score difference with first non-orthologous sequence - O.cuniculus:58 P.jiroveci:306

G1T7R2              	100.00%		L0P9S5              	100.00%
G1TF91              	25.76%		
G1SDY5              	10.10%		
Bootstrap support for G1T7R2 as seed ortholog is 99%.
Bootstrap support for L0P9S5 as seed ortholog is 100%.

Group of orthologs #463. Best score 306 bits
Score difference with first non-orthologous sequence - O.cuniculus:32 P.jiroveci:306

G1SZU4              	100.00%		L0PG34              	100.00%
Bootstrap support for G1SZU4 as seed ortholog is 95%.
Bootstrap support for L0PG34 as seed ortholog is 100%.

Group of orthologs #464. Best score 304 bits
Score difference with first non-orthologous sequence - O.cuniculus:304 P.jiroveci:304

G1SCR7              	100.00%		L0PBK2              	100.00%
Bootstrap support for G1SCR7 as seed ortholog is 100%.
Bootstrap support for L0PBK2 as seed ortholog is 100%.

Group of orthologs #465. Best score 304 bits
Score difference with first non-orthologous sequence - O.cuniculus:304 P.jiroveci:304

G1SSJ7              	100.00%		L0PD03              	100.00%
Bootstrap support for G1SSJ7 as seed ortholog is 100%.
Bootstrap support for L0PD03 as seed ortholog is 100%.

Group of orthologs #466. Best score 302 bits
Score difference with first non-orthologous sequence - O.cuniculus:149 P.jiroveci:141

G1SJR8              	100.00%		L0P966              	100.00%
Bootstrap support for G1SJR8 as seed ortholog is 99%.
Bootstrap support for L0P966 as seed ortholog is 99%.

Group of orthologs #467. Best score 302 bits
Score difference with first non-orthologous sequence - O.cuniculus:114 P.jiroveci:103

G1T7B5              	100.00%		L0PAY5              	100.00%
Bootstrap support for G1T7B5 as seed ortholog is 99%.
Bootstrap support for L0PAY5 as seed ortholog is 99%.

Group of orthologs #468. Best score 302 bits
Score difference with first non-orthologous sequence - O.cuniculus:302 P.jiroveci:302

G1TC84              	100.00%		L0P8B2              	100.00%
Bootstrap support for G1TC84 as seed ortholog is 100%.
Bootstrap support for L0P8B2 as seed ortholog is 100%.

Group of orthologs #469. Best score 300 bits
Score difference with first non-orthologous sequence - O.cuniculus:300 P.jiroveci:300

G1T555              	100.00%		L0PF83              	100.00%
Bootstrap support for G1T555 as seed ortholog is 100%.
Bootstrap support for L0PF83 as seed ortholog is 100%.

Group of orthologs #470. Best score 300 bits
Score difference with first non-orthologous sequence - O.cuniculus:300 P.jiroveci:300

G1U581              	100.00%		L0P7I8              	100.00%
Bootstrap support for G1U581 as seed ortholog is 100%.
Bootstrap support for L0P7I8 as seed ortholog is 100%.

Group of orthologs #471. Best score 299 bits
Score difference with first non-orthologous sequence - O.cuniculus:128 P.jiroveci:198

G1T7Z3              	100.00%		L0P8B4              	100.00%
G1TEN1              	78.78%		
Bootstrap support for G1T7Z3 as seed ortholog is 99%.
Bootstrap support for L0P8B4 as seed ortholog is 100%.

Group of orthologs #472. Best score 299 bits
Score difference with first non-orthologous sequence - O.cuniculus:71 P.jiroveci:299

G1SCR1              	100.00%		L0PEJ3              	100.00%
Bootstrap support for G1SCR1 as seed ortholog is 92%.
Bootstrap support for L0PEJ3 as seed ortholog is 100%.

Group of orthologs #473. Best score 298 bits
Score difference with first non-orthologous sequence - O.cuniculus:298 P.jiroveci:298

G1TFM5              	100.00%		L0PFI8              	100.00%
Bootstrap support for G1TFM5 as seed ortholog is 100%.
Bootstrap support for L0PFI8 as seed ortholog is 100%.

Group of orthologs #474. Best score 297 bits
Score difference with first non-orthologous sequence - O.cuniculus:297 P.jiroveci:297

G1SYQ5              	100.00%		L0PF79              	100.00%
G1U879              	28.73%		
Bootstrap support for G1SYQ5 as seed ortholog is 100%.
Bootstrap support for L0PF79 as seed ortholog is 100%.

Group of orthologs #475. Best score 297 bits
Score difference with first non-orthologous sequence - O.cuniculus:297 P.jiroveci:297

G1SV59              	100.00%		L0PDV1              	100.00%
Bootstrap support for G1SV59 as seed ortholog is 100%.
Bootstrap support for L0PDV1 as seed ortholog is 100%.

Group of orthologs #476. Best score 297 bits
Score difference with first non-orthologous sequence - O.cuniculus:297 P.jiroveci:297

G1T3I4              	100.00%		L0PHK3              	100.00%
Bootstrap support for G1T3I4 as seed ortholog is 100%.
Bootstrap support for L0PHK3 as seed ortholog is 100%.

Group of orthologs #477. Best score 296 bits
Score difference with first non-orthologous sequence - O.cuniculus:207 P.jiroveci:296

G1T3V0              	100.00%		L0P9Z7              	100.00%
Bootstrap support for G1T3V0 as seed ortholog is 99%.
Bootstrap support for L0P9Z7 as seed ortholog is 100%.

Group of orthologs #478. Best score 295 bits
Score difference with first non-orthologous sequence - O.cuniculus:295 P.jiroveci:295

G1SIV3              	100.00%		L0PCI3              	100.00%
Bootstrap support for G1SIV3 as seed ortholog is 100%.
Bootstrap support for L0PCI3 as seed ortholog is 100%.

Group of orthologs #479. Best score 295 bits
Score difference with first non-orthologous sequence - O.cuniculus:295 P.jiroveci:295

G1SL80              	100.00%		L0PHG9              	100.00%
Bootstrap support for G1SL80 as seed ortholog is 100%.
Bootstrap support for L0PHG9 as seed ortholog is 100%.

Group of orthologs #480. Best score 295 bits
Score difference with first non-orthologous sequence - O.cuniculus:247 P.jiroveci:252

G1TDQ3              	100.00%		L0P8I1              	100.00%
Bootstrap support for G1TDQ3 as seed ortholog is 100%.
Bootstrap support for L0P8I1 as seed ortholog is 100%.

Group of orthologs #481. Best score 294 bits
Score difference with first non-orthologous sequence - O.cuniculus:202 P.jiroveci:163

G1SUA0              	100.00%		L0PDB7              	100.00%
G1TYX1              	80.94%		
G1TMB2              	79.11%		
Bootstrap support for G1SUA0 as seed ortholog is 100%.
Bootstrap support for L0PDB7 as seed ortholog is 100%.

Group of orthologs #482. Best score 293 bits
Score difference with first non-orthologous sequence - O.cuniculus:293 P.jiroveci:293

G1SPK4              	100.00%		L0PHG7              	100.00%
G1U6N2              	76.83%		
G1TP77              	45.73%		
Bootstrap support for G1SPK4 as seed ortholog is 100%.
Bootstrap support for L0PHG7 as seed ortholog is 100%.

Group of orthologs #483. Best score 293 bits
Score difference with first non-orthologous sequence - O.cuniculus:293 P.jiroveci:293

G1STH0              	100.00%		L0PBT9              	100.00%
                    	       		L0P9Y0              	42.18%
Bootstrap support for G1STH0 as seed ortholog is 100%.
Bootstrap support for L0PBT9 as seed ortholog is 100%.

Group of orthologs #484. Best score 292 bits
Score difference with first non-orthologous sequence - O.cuniculus:292 P.jiroveci:47

G1T765              	100.00%		L0PAM1              	100.00%
Bootstrap support for G1T765 as seed ortholog is 100%.
Bootstrap support for L0PAM1 as seed ortholog is 89%.

Group of orthologs #485. Best score 292 bits
Score difference with first non-orthologous sequence - O.cuniculus:292 P.jiroveci:292

G1T4L3              	100.00%		L0PG44              	100.00%
Bootstrap support for G1T4L3 as seed ortholog is 100%.
Bootstrap support for L0PG44 as seed ortholog is 100%.

Group of orthologs #486. Best score 292 bits
Score difference with first non-orthologous sequence - O.cuniculus:292 P.jiroveci:292

G1U300              	100.00%		L0PAC0              	100.00%
Bootstrap support for G1U300 as seed ortholog is 100%.
Bootstrap support for L0PAC0 as seed ortholog is 100%.

Group of orthologs #487. Best score 290 bits
Score difference with first non-orthologous sequence - O.cuniculus:290 P.jiroveci:290

G1SPT0              	100.00%		L0PEY2              	100.00%
Bootstrap support for G1SPT0 as seed ortholog is 100%.
Bootstrap support for L0PEY2 as seed ortholog is 100%.

Group of orthologs #488. Best score 290 bits
Score difference with first non-orthologous sequence - O.cuniculus:290 P.jiroveci:290

G1U2X8              	100.00%		L0PDL6              	100.00%
Bootstrap support for G1U2X8 as seed ortholog is 100%.
Bootstrap support for L0PDL6 as seed ortholog is 100%.

Group of orthologs #489. Best score 289 bits
Score difference with first non-orthologous sequence - O.cuniculus:289 P.jiroveci:289

G1T967              	100.00%		L0P9C4              	100.00%
G1SCS1              	65.54%		
Bootstrap support for G1T967 as seed ortholog is 100%.
Bootstrap support for L0P9C4 as seed ortholog is 100%.

Group of orthologs #490. Best score 289 bits
Score difference with first non-orthologous sequence - O.cuniculus:95 P.jiroveci:235

G1TQT0              	100.00%		L0P8I7              	100.00%
O97572              	87.79%		
Bootstrap support for G1TQT0 as seed ortholog is 99%.
Bootstrap support for L0P8I7 as seed ortholog is 100%.

Group of orthologs #491. Best score 289 bits
Score difference with first non-orthologous sequence - O.cuniculus:289 P.jiroveci:289

G1SGR0              	100.00%		L0PFE1              	100.00%
Bootstrap support for G1SGR0 as seed ortholog is 100%.
Bootstrap support for L0PFE1 as seed ortholog is 100%.

Group of orthologs #492. Best score 289 bits
Score difference with first non-orthologous sequence - O.cuniculus:289 P.jiroveci:289

G1T103              	100.00%		L0PFZ0              	100.00%
Bootstrap support for G1T103 as seed ortholog is 100%.
Bootstrap support for L0PFZ0 as seed ortholog is 100%.

Group of orthologs #493. Best score 289 bits
Score difference with first non-orthologous sequence - O.cuniculus:207 P.jiroveci:289

Q5IH81              	100.00%		L0PAL2              	100.00%
Bootstrap support for Q5IH81 as seed ortholog is 100%.
Bootstrap support for L0PAL2 as seed ortholog is 100%.

Group of orthologs #494. Best score 288 bits
Score difference with first non-orthologous sequence - O.cuniculus:108 P.jiroveci:288

G1TAP1              	100.00%		L0PDC7              	100.00%
G1SPZ9              	28.48%		
G1U2B1              	23.94%		
Bootstrap support for G1TAP1 as seed ortholog is 99%.
Bootstrap support for L0PDC7 as seed ortholog is 100%.

Group of orthologs #495. Best score 288 bits
Score difference with first non-orthologous sequence - O.cuniculus:24 P.jiroveci:101

P29678              	100.00%		L0PB47              	100.00%
Bootstrap support for P29678 as seed ortholog is 73%.
Alternative seed ortholog is G1SWD5 (24 bits away from this cluster)
Bootstrap support for L0PB47 as seed ortholog is 99%.

Group of orthologs #496. Best score 287 bits
Score difference with first non-orthologous sequence - O.cuniculus:160 P.jiroveci:287

G1T9T8              	100.00%		L0P9F6              	100.00%
O46373              	41.34%		
G1T524              	40.22%		
G1SHV7              	39.94%		
Bootstrap support for G1T9T8 as seed ortholog is 100%.
Bootstrap support for L0P9F6 as seed ortholog is 100%.

Group of orthologs #497. Best score 287 bits
Score difference with first non-orthologous sequence - O.cuniculus:198 P.jiroveci:287

G1T792              	100.00%		L0PDV0              	100.00%
Bootstrap support for G1T792 as seed ortholog is 99%.
Bootstrap support for L0PDV0 as seed ortholog is 100%.

Group of orthologs #498. Best score 287 bits
Score difference with first non-orthologous sequence - O.cuniculus:287 P.jiroveci:145

G1TA95              	100.00%		L0PBF0              	100.00%
Bootstrap support for G1TA95 as seed ortholog is 100%.
Bootstrap support for L0PBF0 as seed ortholog is 99%.

Group of orthologs #499. Best score 287 bits
Score difference with first non-orthologous sequence - O.cuniculus:287 P.jiroveci:287

G1TV75              	100.00%		L0P861              	100.00%
Bootstrap support for G1TV75 as seed ortholog is 100%.
Bootstrap support for L0P861 as seed ortholog is 100%.

Group of orthologs #500. Best score 287 bits
Score difference with first non-orthologous sequence - O.cuniculus:191 P.jiroveci:287

P40826              	100.00%		L0PEM3              	100.00%
Bootstrap support for P40826 as seed ortholog is 100%.
Bootstrap support for L0PEM3 as seed ortholog is 100%.

Group of orthologs #501. Best score 286 bits
Score difference with first non-orthologous sequence - O.cuniculus:95 P.jiroveci:286

G1SDG3              	100.00%		L0PH42              	100.00%
G1SCI3              	72.18%		
G1TJF6              	53.03%		
Bootstrap support for G1SDG3 as seed ortholog is 97%.
Bootstrap support for L0PH42 as seed ortholog is 100%.

Group of orthologs #502. Best score 286 bits
Score difference with first non-orthologous sequence - O.cuniculus:286 P.jiroveci:286

G1SZG7              	100.00%		L0PG22              	100.00%
                    	       		L0PB04              	71.69%
Bootstrap support for G1SZG7 as seed ortholog is 100%.
Bootstrap support for L0PG22 as seed ortholog is 100%.

Group of orthologs #503. Best score 286 bits
Score difference with first non-orthologous sequence - O.cuniculus:199 P.jiroveci:286

G1SUF4              	100.00%		L0PEC0              	100.00%
Bootstrap support for G1SUF4 as seed ortholog is 100%.
Bootstrap support for L0PEC0 as seed ortholog is 100%.

Group of orthologs #504. Best score 285 bits
Score difference with first non-orthologous sequence - O.cuniculus:285 P.jiroveci:285

G1SU86              	100.00%		L0PGF2              	100.00%
G1SL13              	48.88%		
G1SX87              	34.89%		
Bootstrap support for G1SU86 as seed ortholog is 100%.
Bootstrap support for L0PGF2 as seed ortholog is 100%.

Group of orthologs #505. Best score 283 bits
Score difference with first non-orthologous sequence - O.cuniculus:283 P.jiroveci:283

G1TDE5              	100.00%		L0PAJ2              	100.00%
Bootstrap support for G1TDE5 as seed ortholog is 100%.
Bootstrap support for L0PAJ2 as seed ortholog is 100%.

Group of orthologs #506. Best score 282 bits
Score difference with first non-orthologous sequence - O.cuniculus:282 P.jiroveci:282

G1SL95              	100.00%		L0P9T2              	100.00%
G1SS14              	28.75%		
Bootstrap support for G1SL95 as seed ortholog is 100%.
Bootstrap support for L0P9T2 as seed ortholog is 100%.

Group of orthologs #507. Best score 282 bits
Score difference with first non-orthologous sequence - O.cuniculus:85 P.jiroveci:183

G1SFX7              	100.00%		L0PC59              	100.00%
Bootstrap support for G1SFX7 as seed ortholog is 100%.
Bootstrap support for L0PC59 as seed ortholog is 100%.

Group of orthologs #508. Best score 282 bits
Score difference with first non-orthologous sequence - O.cuniculus:187 P.jiroveci:282

G1SM50              	100.00%		L0PHJ3              	100.00%
Bootstrap support for G1SM50 as seed ortholog is 100%.
Bootstrap support for L0PHJ3 as seed ortholog is 100%.

Group of orthologs #509. Best score 282 bits
Score difference with first non-orthologous sequence - O.cuniculus:282 P.jiroveci:282

G1TRL2              	100.00%		L0PA60              	100.00%
Bootstrap support for G1TRL2 as seed ortholog is 100%.
Bootstrap support for L0PA60 as seed ortholog is 100%.

Group of orthologs #510. Best score 281 bits
Score difference with first non-orthologous sequence - O.cuniculus:281 P.jiroveci:281

G1SKM5              	100.00%		L0P870              	100.00%
Bootstrap support for G1SKM5 as seed ortholog is 100%.
Bootstrap support for L0P870 as seed ortholog is 100%.

Group of orthologs #511. Best score 280 bits
Score difference with first non-orthologous sequence - O.cuniculus:280 P.jiroveci:280

G1T157              	100.00%		L0PBE0              	100.00%
G1SUR8              	65.48%		
Bootstrap support for G1T157 as seed ortholog is 100%.
Bootstrap support for L0PBE0 as seed ortholog is 100%.

Group of orthologs #512. Best score 280 bits
Score difference with first non-orthologous sequence - O.cuniculus:280 P.jiroveci:280

G1TCX6              	100.00%		L0PGV8              	100.00%
Bootstrap support for G1TCX6 as seed ortholog is 100%.
Bootstrap support for L0PGV8 as seed ortholog is 100%.

Group of orthologs #513. Best score 280 bits
Score difference with first non-orthologous sequence - O.cuniculus:7 P.jiroveci:280

G1U176              	100.00%		L0PEJ1              	100.00%
Bootstrap support for G1U176 as seed ortholog is 84%.
Bootstrap support for L0PEJ1 as seed ortholog is 100%.

Group of orthologs #514. Best score 279 bits
Score difference with first non-orthologous sequence - O.cuniculus:185 P.jiroveci:229

G1SHG2              	100.00%		L0PFE0              	100.00%
Bootstrap support for G1SHG2 as seed ortholog is 100%.
Bootstrap support for L0PFE0 as seed ortholog is 100%.

Group of orthologs #515. Best score 279 bits
Score difference with first non-orthologous sequence - O.cuniculus:187 P.jiroveci:226

G1T6B3              	100.00%		L0PE04              	100.00%
Bootstrap support for G1T6B3 as seed ortholog is 100%.
Bootstrap support for L0PE04 as seed ortholog is 100%.

Group of orthologs #516. Best score 278 bits
Score difference with first non-orthologous sequence - O.cuniculus:108 P.jiroveci:278

G1SV32              	100.00%		L0PCG0              	100.00%
G1TUB1              	90.54%		
Bootstrap support for G1SV32 as seed ortholog is 99%.
Bootstrap support for L0PCG0 as seed ortholog is 100%.

Group of orthologs #517. Best score 278 bits
Score difference with first non-orthologous sequence - O.cuniculus:278 P.jiroveci:278

G1TYD9              	100.00%		L0PC61              	100.00%
P41111              	84.83%		
Bootstrap support for G1TYD9 as seed ortholog is 100%.
Bootstrap support for L0PC61 as seed ortholog is 100%.

Group of orthologs #518. Best score 278 bits
Score difference with first non-orthologous sequence - O.cuniculus:184 P.jiroveci:278

G1SPG6              	100.00%		L0PH80              	100.00%
Bootstrap support for G1SPG6 as seed ortholog is 100%.
Bootstrap support for L0PH80 as seed ortholog is 100%.

Group of orthologs #519. Best score 278 bits
Score difference with first non-orthologous sequence - O.cuniculus:278 P.jiroveci:278

G1T0H1              	100.00%		L0PCX5              	100.00%
Bootstrap support for G1T0H1 as seed ortholog is 100%.
Bootstrap support for L0PCX5 as seed ortholog is 100%.

Group of orthologs #520. Best score 277 bits
Score difference with first non-orthologous sequence - O.cuniculus:220 P.jiroveci:222

G1TH59              	100.00%		L0PEP1              	100.00%
G1SGL7              	21.77%		L0PIJ3              	100.00%
Bootstrap support for G1TH59 as seed ortholog is 100%.
Bootstrap support for L0PEP1 as seed ortholog is 100%.
Bootstrap support for L0PIJ3 as seed ortholog is 100%.

Group of orthologs #521. Best score 277 bits
Score difference with first non-orthologous sequence - O.cuniculus:277 P.jiroveci:277

G1SEM7              	100.00%		L0PDA9              	100.00%
Bootstrap support for G1SEM7 as seed ortholog is 100%.
Bootstrap support for L0PDA9 as seed ortholog is 100%.

Group of orthologs #522. Best score 277 bits
Score difference with first non-orthologous sequence - O.cuniculus:277 P.jiroveci:277

G1SUU2              	100.00%		L0PB28              	100.00%
Bootstrap support for G1SUU2 as seed ortholog is 100%.
Bootstrap support for L0PB28 as seed ortholog is 100%.

Group of orthologs #523. Best score 277 bits
Score difference with first non-orthologous sequence - O.cuniculus:277 P.jiroveci:277

G1T8E8              	100.00%		L0P9S7              	100.00%
Bootstrap support for G1T8E8 as seed ortholog is 100%.
Bootstrap support for L0P9S7 as seed ortholog is 100%.

Group of orthologs #524. Best score 276 bits
Score difference with first non-orthologous sequence - O.cuniculus:136 P.jiroveci:218

G1SX70              	100.00%		L0PGP6              	100.00%
G1SWY0              	78.68%		
Bootstrap support for G1SX70 as seed ortholog is 100%.
Bootstrap support for L0PGP6 as seed ortholog is 100%.

Group of orthologs #525. Best score 276 bits
Score difference with first non-orthologous sequence - O.cuniculus:276 P.jiroveci:276

G1SDA8              	100.00%		L0PE17              	100.00%
Bootstrap support for G1SDA8 as seed ortholog is 100%.
Bootstrap support for L0PE17 as seed ortholog is 100%.

Group of orthologs #526. Best score 275 bits
Score difference with first non-orthologous sequence - O.cuniculus:275 P.jiroveci:275

G1SJG1              	100.00%		L0PDY1              	100.00%
G1TLI1              	75.79%		
G1TUW9              	39.47%		
G1T1S8              	35.84%		
Bootstrap support for G1SJG1 as seed ortholog is 100%.
Bootstrap support for L0PDY1 as seed ortholog is 100%.

Group of orthologs #527. Best score 275 bits
Score difference with first non-orthologous sequence - O.cuniculus:225 P.jiroveci:275

G1SIG3              	100.00%		L0P8L5              	100.00%
Bootstrap support for G1SIG3 as seed ortholog is 100%.
Bootstrap support for L0P8L5 as seed ortholog is 100%.

Group of orthologs #528. Best score 275 bits
Score difference with first non-orthologous sequence - O.cuniculus:275 P.jiroveci:275

G1SSE8              	100.00%		L0PEG1              	100.00%
Bootstrap support for G1SSE8 as seed ortholog is 100%.
Bootstrap support for L0PEG1 as seed ortholog is 100%.

Group of orthologs #529. Best score 275 bits
Score difference with first non-orthologous sequence - O.cuniculus:275 P.jiroveci:275

G1TL42              	100.00%		L0PEB1              	100.00%
Bootstrap support for G1TL42 as seed ortholog is 100%.
Bootstrap support for L0PEB1 as seed ortholog is 100%.

Group of orthologs #530. Best score 274 bits
Score difference with first non-orthologous sequence - O.cuniculus:274 P.jiroveci:274

G1SFI7              	100.00%		L0PAQ1              	100.00%
Bootstrap support for G1SFI7 as seed ortholog is 100%.
Bootstrap support for L0PAQ1 as seed ortholog is 100%.

Group of orthologs #531. Best score 274 bits
Score difference with first non-orthologous sequence - O.cuniculus:213 P.jiroveci:274

G1SI62              	100.00%		L0PHN0              	100.00%
Bootstrap support for G1SI62 as seed ortholog is 100%.
Bootstrap support for L0PHN0 as seed ortholog is 100%.

Group of orthologs #532. Best score 272 bits
Score difference with first non-orthologous sequence - O.cuniculus:109 P.jiroveci:163

G1TXQ6              	100.00%		L0P9E4              	100.00%
G1U2Y1              	89.58%		
G1TXI0              	87.50%		
G1U7D7              	82.29%		
G1SE57              	33.33%		
G1U4K3              	29.17%		
Bootstrap support for G1TXQ6 as seed ortholog is 99%.
Bootstrap support for L0P9E4 as seed ortholog is 100%.

Group of orthologs #533. Best score 272 bits
Score difference with first non-orthologous sequence - O.cuniculus:272 P.jiroveci:272

G1TUC8              	100.00%		L0P961              	100.00%
G1TQR0              	82.96%		
G1TEM1              	75.14%		
G1U4H8              	72.16%		
Bootstrap support for G1TUC8 as seed ortholog is 100%.
Bootstrap support for L0P961 as seed ortholog is 100%.

Group of orthologs #534. Best score 271 bits
Score difference with first non-orthologous sequence - O.cuniculus:102 P.jiroveci:1

G1SL57              	100.00%		L0PAI9              	100.00%
G1U0Q7              	100.00%		
G1SXV1              	35.17%		
G1U316              	16.46%		
G1TN33              	9.03%		
G1SF47              	8.85%		
G1TT09              	7.08%		
G1SR49              	6.19%		
Bootstrap support for G1SL57 as seed ortholog is 99%.
Bootstrap support for G1U0Q7 as seed ortholog is 99%.
Bootstrap support for L0PAI9 as seed ortholog is 52%.
Alternative seed ortholog is L0PCM1 (1 bits away from this cluster)

Group of orthologs #535. Best score 271 bits
Score difference with first non-orthologous sequence - O.cuniculus:41 P.jiroveci:91

G1SG59              	100.00%		L0PDD3              	100.00%
G1SUR2              	85.96%		
Bootstrap support for G1SG59 as seed ortholog is 93%.
Bootstrap support for L0PDD3 as seed ortholog is 99%.

Group of orthologs #536. Best score 271 bits
Score difference with first non-orthologous sequence - O.cuniculus:80 P.jiroveci:271

G1T4Q9              	100.00%		L0PCJ2              	100.00%
G1SGV9              	15.99%		
Bootstrap support for G1T4Q9 as seed ortholog is 99%.
Bootstrap support for L0PCJ2 as seed ortholog is 100%.

Group of orthologs #537. Best score 271 bits
Score difference with first non-orthologous sequence - O.cuniculus:205 P.jiroveci:220

G1SFQ1              	100.00%		L0PHK8              	100.00%
Bootstrap support for G1SFQ1 as seed ortholog is 100%.
Bootstrap support for L0PHK8 as seed ortholog is 100%.

Group of orthologs #538. Best score 271 bits
Score difference with first non-orthologous sequence - O.cuniculus:271 P.jiroveci:271

G1SPF4              	100.00%		L0P9W3              	100.00%
Bootstrap support for G1SPF4 as seed ortholog is 100%.
Bootstrap support for L0P9W3 as seed ortholog is 100%.

Group of orthologs #539. Best score 270 bits
Score difference with first non-orthologous sequence - O.cuniculus:270 P.jiroveci:270

G1T7P8              	100.00%		L0PA72              	100.00%
G1TWG6              	59.18%		
Bootstrap support for G1T7P8 as seed ortholog is 100%.
Bootstrap support for L0PA72 as seed ortholog is 100%.

Group of orthologs #540. Best score 270 bits
Score difference with first non-orthologous sequence - O.cuniculus:270 P.jiroveci:270

G1SWI7              	100.00%		L0PB03              	100.00%
Bootstrap support for G1SWI7 as seed ortholog is 100%.
Bootstrap support for L0PB03 as seed ortholog is 100%.

Group of orthologs #541. Best score 270 bits
Score difference with first non-orthologous sequence - O.cuniculus:270 P.jiroveci:270

G1T153              	100.00%		L0PDJ2              	100.00%
Bootstrap support for G1T153 as seed ortholog is 100%.
Bootstrap support for L0PDJ2 as seed ortholog is 100%.

Group of orthologs #542. Best score 270 bits
Score difference with first non-orthologous sequence - O.cuniculus:270 P.jiroveci:270

G1T519              	100.00%		L0PFU1              	100.00%
Bootstrap support for G1T519 as seed ortholog is 100%.
Bootstrap support for L0PFU1 as seed ortholog is 100%.

Group of orthologs #543. Best score 270 bits
Score difference with first non-orthologous sequence - O.cuniculus:270 P.jiroveci:270

G1TUE7              	100.00%		L0PAD9              	100.00%
Bootstrap support for G1TUE7 as seed ortholog is 100%.
Bootstrap support for L0PAD9 as seed ortholog is 100%.

Group of orthologs #544. Best score 269 bits
Score difference with first non-orthologous sequence - O.cuniculus:84 P.jiroveci:269

P43159              	100.00%		L0PG89              	100.00%
G1T1U4              	22.45%		
G1U3N9              	22.45%		
G1TKZ8              	22.26%		
G1U4T7              	21.89%		
P28712              	21.71%		
G1SUX4              	20.78%		
G1SG52              	20.59%		
G1TM78              	20.59%		
G1SHB1              	20.41%		
G1U5K8              	19.11%		
G1SMJ7              	15.77%		
G1SK95              	12.62%		
G1STG9              	12.06%		
Q9GMY2              	11.50%		
G1TUA3              	10.76%		
Bootstrap support for P43159 as seed ortholog is 98%.
Bootstrap support for L0PG89 as seed ortholog is 100%.

Group of orthologs #545. Best score 269 bits
Score difference with first non-orthologous sequence - O.cuniculus:269 P.jiroveci:269

G1SMQ8              	100.00%		L0PI09              	100.00%
Bootstrap support for G1SMQ8 as seed ortholog is 100%.
Bootstrap support for L0PI09 as seed ortholog is 100%.

Group of orthologs #546. Best score 269 bits
Score difference with first non-orthologous sequence - O.cuniculus:269 P.jiroveci:269

G1SWF3              	100.00%		L0PG08              	100.00%
Bootstrap support for G1SWF3 as seed ortholog is 100%.
Bootstrap support for L0PG08 as seed ortholog is 100%.

Group of orthologs #547. Best score 269 bits
Score difference with first non-orthologous sequence - O.cuniculus:269 P.jiroveci:269

G1T9V4              	100.00%		L0PBV6              	100.00%
Bootstrap support for G1T9V4 as seed ortholog is 100%.
Bootstrap support for L0PBV6 as seed ortholog is 100%.

Group of orthologs #548. Best score 269 bits
Score difference with first non-orthologous sequence - O.cuniculus:224 P.jiroveci:269

G1T670              	100.00%		L0PFS8              	100.00%
Bootstrap support for G1T670 as seed ortholog is 100%.
Bootstrap support for L0PFS8 as seed ortholog is 100%.

Group of orthologs #549. Best score 268 bits
Score difference with first non-orthologous sequence - O.cuniculus:268 P.jiroveci:176

G1SL05              	100.00%		L0P7W4              	100.00%
G1TZK0              	50.94%		
Bootstrap support for G1SL05 as seed ortholog is 100%.
Bootstrap support for L0P7W4 as seed ortholog is 100%.

Group of orthologs #550. Best score 268 bits
Score difference with first non-orthologous sequence - O.cuniculus:224 P.jiroveci:268

G1T5Y3              	100.00%		L0P6P2              	100.00%
G1U351              	49.63%		
Bootstrap support for G1T5Y3 as seed ortholog is 100%.
Bootstrap support for L0P6P2 as seed ortholog is 100%.

Group of orthologs #551. Best score 268 bits
Score difference with first non-orthologous sequence - O.cuniculus:212 P.jiroveci:223

G1SDP7              	100.00%		L0PBH8              	100.00%
Bootstrap support for G1SDP7 as seed ortholog is 100%.
Bootstrap support for L0PBH8 as seed ortholog is 100%.

Group of orthologs #552. Best score 267 bits
Score difference with first non-orthologous sequence - O.cuniculus:151 P.jiroveci:267

G1SZT5              	100.00%		L0PBM0              	100.00%
G1SQQ5              	12.35%		
Bootstrap support for G1SZT5 as seed ortholog is 99%.
Bootstrap support for L0PBM0 as seed ortholog is 100%.

Group of orthologs #553. Best score 267 bits
Score difference with first non-orthologous sequence - O.cuniculus:177 P.jiroveci:210

G1TFL3              	100.00%		L0PEF5              	100.00%
Bootstrap support for G1TFL3 as seed ortholog is 100%.
Bootstrap support for L0PEF5 as seed ortholog is 100%.

Group of orthologs #554. Best score 266 bits
Score difference with first non-orthologous sequence - O.cuniculus:57 P.jiroveci:266

G1TRG8              	100.00%		L0PDF9              	100.00%
G1SEJ8              	81.66%		
G1SP68              	73.60%		
G1SP71              	52.80%		
G1TZV8              	51.90%		
G1TD75              	51.45%		
G1SMS5              	46.98%		
G1SP25              	18.79%		
G1TBW7              	11.41%		
Bootstrap support for G1TRG8 as seed ortholog is 95%.
Bootstrap support for L0PDF9 as seed ortholog is 100%.

Group of orthologs #555. Best score 266 bits
Score difference with first non-orthologous sequence - O.cuniculus:154 P.jiroveci:266

G1SSC1              	100.00%		L0PDR6              	100.00%
G1TCV5              	78.11%		
Bootstrap support for G1SSC1 as seed ortholog is 99%.
Bootstrap support for L0PDR6 as seed ortholog is 100%.

Group of orthologs #556. Best score 266 bits
Score difference with first non-orthologous sequence - O.cuniculus:266 P.jiroveci:266

G1SYU2              	100.00%		L0PB61              	100.00%
G1TQA7              	68.88%		
Bootstrap support for G1SYU2 as seed ortholog is 100%.
Bootstrap support for L0PB61 as seed ortholog is 100%.

Group of orthologs #557. Best score 264 bits
Score difference with first non-orthologous sequence - O.cuniculus:264 P.jiroveci:264

G1T733              	100.00%		L0P7Q3              	100.00%
Bootstrap support for G1T733 as seed ortholog is 100%.
Bootstrap support for L0P7Q3 as seed ortholog is 100%.

Group of orthologs #558. Best score 262 bits
Score difference with first non-orthologous sequence - O.cuniculus:193 P.jiroveci:182

G1SYI2              	100.00%		L0PF24              	100.00%
G1SEC9              	88.01%		
G1SI10              	87.33%		
G1T4D5              	78.96%		
Q6PNB6              	25.11%		
Bootstrap support for G1SYI2 as seed ortholog is 100%.
Bootstrap support for L0PF24 as seed ortholog is 100%.

Group of orthologs #559. Best score 262 bits
Score difference with first non-orthologous sequence - O.cuniculus:121 P.jiroveci:262

G1TB66              	100.00%		L0PDT8              	100.00%
                    	       		L0P9R2              	90.03%
Bootstrap support for G1TB66 as seed ortholog is 99%.
Bootstrap support for L0PDT8 as seed ortholog is 100%.

Group of orthologs #560. Best score 262 bits
Score difference with first non-orthologous sequence - O.cuniculus:213 P.jiroveci:262

G1T1L4              	100.00%		L0P9B8              	100.00%
Bootstrap support for G1T1L4 as seed ortholog is 100%.
Bootstrap support for L0P9B8 as seed ortholog is 100%.

Group of orthologs #561. Best score 262 bits
Score difference with first non-orthologous sequence - O.cuniculus:262 P.jiroveci:262

G1T7T6              	100.00%		L0PB11              	100.00%
Bootstrap support for G1T7T6 as seed ortholog is 100%.
Bootstrap support for L0PB11 as seed ortholog is 100%.

Group of orthologs #562. Best score 261 bits
Score difference with first non-orthologous sequence - O.cuniculus:261 P.jiroveci:261

G1SEL9              	100.00%		L0PBY9              	100.00%
Bootstrap support for G1SEL9 as seed ortholog is 100%.
Bootstrap support for L0PBY9 as seed ortholog is 100%.

Group of orthologs #563. Best score 259 bits
Score difference with first non-orthologous sequence - O.cuniculus:157 P.jiroveci:159

G1SFJ9              	100.00%		L0PFK0              	100.00%
Bootstrap support for G1SFJ9 as seed ortholog is 99%.
Bootstrap support for L0PFK0 as seed ortholog is 99%.

Group of orthologs #564. Best score 259 bits
Score difference with first non-orthologous sequence - O.cuniculus:259 P.jiroveci:259

G1U2X4              	100.00%		L0PCT6              	100.00%
Bootstrap support for G1U2X4 as seed ortholog is 100%.
Bootstrap support for L0PCT6 as seed ortholog is 100%.

Group of orthologs #565. Best score 257 bits
Score difference with first non-orthologous sequence - O.cuniculus:257 P.jiroveci:257

G1SJ08              	100.00%		L0PGD7              	100.00%
G1SMX7              	50.59%		L0PGQ0              	56.74%
G1SUJ1              	43.53%		
Bootstrap support for G1SJ08 as seed ortholog is 100%.
Bootstrap support for L0PGD7 as seed ortholog is 100%.

Group of orthologs #566. Best score 257 bits
Score difference with first non-orthologous sequence - O.cuniculus:257 P.jiroveci:257

P29694              	100.00%		L0P9F7              	100.00%
G1TVL1              	88.68%		L0PGP0              	82.53%
Bootstrap support for P29694 as seed ortholog is 100%.
Bootstrap support for L0P9F7 as seed ortholog is 100%.

Group of orthologs #567. Best score 257 bits
Score difference with first non-orthologous sequence - O.cuniculus:157 P.jiroveci:257

G1SCP1              	100.00%		L0PAM8              	100.00%
Bootstrap support for G1SCP1 as seed ortholog is 99%.
Bootstrap support for L0PAM8 as seed ortholog is 100%.

Group of orthologs #568. Best score 255 bits
Score difference with first non-orthologous sequence - O.cuniculus:176 P.jiroveci:201

G1TVH1              	100.00%		L0PFY7              	100.00%
G1TI49              	62.33%		
Bootstrap support for G1TVH1 as seed ortholog is 100%.
Bootstrap support for L0PFY7 as seed ortholog is 100%.

Group of orthologs #569. Best score 255 bits
Score difference with first non-orthologous sequence - O.cuniculus:255 P.jiroveci:255

G1U0T4              	100.00%		L0PE74              	100.00%
G1TV50              	29.64%		
Bootstrap support for G1U0T4 as seed ortholog is 100%.
Bootstrap support for L0PE74 as seed ortholog is 100%.

Group of orthologs #570. Best score 255 bits
Score difference with first non-orthologous sequence - O.cuniculus:255 P.jiroveci:255

G1SGL4              	100.00%		L0P9M9              	100.00%
Bootstrap support for G1SGL4 as seed ortholog is 100%.
Bootstrap support for L0P9M9 as seed ortholog is 100%.

Group of orthologs #571. Best score 255 bits
Score difference with first non-orthologous sequence - O.cuniculus:255 P.jiroveci:255

G1SIY3              	100.00%		L0P723              	100.00%
Bootstrap support for G1SIY3 as seed ortholog is 100%.
Bootstrap support for L0P723 as seed ortholog is 100%.

Group of orthologs #572. Best score 255 bits
Score difference with first non-orthologous sequence - O.cuniculus:255 P.jiroveci:255

G1SSE5              	100.00%		L0P7P7              	100.00%
Bootstrap support for G1SSE5 as seed ortholog is 100%.
Bootstrap support for L0P7P7 as seed ortholog is 100%.

Group of orthologs #573. Best score 255 bits
Score difference with first non-orthologous sequence - O.cuniculus:255 P.jiroveci:255

G1TC65              	100.00%		L0PET8              	100.00%
Bootstrap support for G1TC65 as seed ortholog is 100%.
Bootstrap support for L0PET8 as seed ortholog is 100%.

Group of orthologs #574. Best score 255 bits
Score difference with first non-orthologous sequence - O.cuniculus:163 P.jiroveci:255

G1TDM4              	100.00%		L0PFQ3              	100.00%
Bootstrap support for G1TDM4 as seed ortholog is 100%.
Bootstrap support for L0PFQ3 as seed ortholog is 100%.

Group of orthologs #575. Best score 254 bits
Score difference with first non-orthologous sequence - O.cuniculus:254 P.jiroveci:254

G1T1X4              	100.00%		L0PCC1              	100.00%
Bootstrap support for G1T1X4 as seed ortholog is 100%.
Bootstrap support for L0PCC1 as seed ortholog is 100%.

Group of orthologs #576. Best score 254 bits
Score difference with first non-orthologous sequence - O.cuniculus:254 P.jiroveci:254

G1TUB8              	100.00%		L0PAM2              	100.00%
Bootstrap support for G1TUB8 as seed ortholog is 100%.
Bootstrap support for L0PAM2 as seed ortholog is 100%.

Group of orthologs #577. Best score 253 bits
Score difference with first non-orthologous sequence - O.cuniculus:202 P.jiroveci:201

G1SVE5              	100.00%		L0P895              	100.00%
Bootstrap support for G1SVE5 as seed ortholog is 100%.
Bootstrap support for L0P895 as seed ortholog is 100%.

Group of orthologs #578. Best score 252 bits
Score difference with first non-orthologous sequence - O.cuniculus:252 P.jiroveci:252

G1SZ81              	100.00%		L0PDN4              	100.00%
G1TPJ2              	31.44%		
Bootstrap support for G1SZ81 as seed ortholog is 100%.
Bootstrap support for L0PDN4 as seed ortholog is 100%.

Group of orthologs #579. Best score 252 bits
Score difference with first non-orthologous sequence - O.cuniculus:252 P.jiroveci:252

G1SS89              	100.00%		L0P914              	100.00%
Bootstrap support for G1SS89 as seed ortholog is 100%.
Bootstrap support for L0P914 as seed ortholog is 100%.

Group of orthologs #580. Best score 251 bits
Score difference with first non-orthologous sequence - O.cuniculus:251 P.jiroveci:251

G1SQQ2              	100.00%		L0PEY5              	100.00%
A4UMC5              	98.58%		
Bootstrap support for G1SQQ2 as seed ortholog is 100%.
Bootstrap support for L0PEY5 as seed ortholog is 100%.

Group of orthologs #581. Best score 251 bits
Score difference with first non-orthologous sequence - O.cuniculus:251 P.jiroveci:251

G1SLV6              	100.00%		L0P949              	100.00%
Bootstrap support for G1SLV6 as seed ortholog is 100%.
Bootstrap support for L0P949 as seed ortholog is 100%.

Group of orthologs #582. Best score 251 bits
Score difference with first non-orthologous sequence - O.cuniculus:91 P.jiroveci:251

G1SYL3              	100.00%		L0P962              	100.00%
Bootstrap support for G1SYL3 as seed ortholog is 95%.
Bootstrap support for L0P962 as seed ortholog is 100%.

Group of orthologs #583. Best score 250 bits
Score difference with first non-orthologous sequence - O.cuniculus:250 P.jiroveci:250

G1SD91              	100.00%		L0PID4              	100.00%
                    	       		L0PGF7              	30.88%
Bootstrap support for G1SD91 as seed ortholog is 100%.
Bootstrap support for L0PID4 as seed ortholog is 100%.

Group of orthologs #584. Best score 250 bits
Score difference with first non-orthologous sequence - O.cuniculus:250 P.jiroveci:250

G1SCN9              	100.00%		L0PFC0              	100.00%
Bootstrap support for G1SCN9 as seed ortholog is 100%.
Bootstrap support for L0PFC0 as seed ortholog is 100%.

Group of orthologs #585. Best score 250 bits
Score difference with first non-orthologous sequence - O.cuniculus:250 P.jiroveci:250

G1STM6              	100.00%		L0PFX9              	100.00%
Bootstrap support for G1STM6 as seed ortholog is 100%.
Bootstrap support for L0PFX9 as seed ortholog is 100%.

Group of orthologs #586. Best score 250 bits
Score difference with first non-orthologous sequence - O.cuniculus:250 P.jiroveci:250

G1TCU2              	100.00%		L0PEN7              	100.00%
Bootstrap support for G1TCU2 as seed ortholog is 100%.
Bootstrap support for L0PEN7 as seed ortholog is 100%.

Group of orthologs #587. Best score 249 bits
Score difference with first non-orthologous sequence - O.cuniculus:91 P.jiroveci:249

G1SG80              	100.00%		L0PEX1              	100.00%
G1TH90              	16.45%		
Bootstrap support for G1SG80 as seed ortholog is 99%.
Bootstrap support for L0PEX1 as seed ortholog is 100%.

Group of orthologs #588. Best score 249 bits
Score difference with first non-orthologous sequence - O.cuniculus:36 P.jiroveci:125

G1TFZ7              	100.00%		L0PGH8              	100.00%
Bootstrap support for G1TFZ7 as seed ortholog is 78%.
Bootstrap support for L0PGH8 as seed ortholog is 99%.

Group of orthologs #589. Best score 249 bits
Score difference with first non-orthologous sequence - O.cuniculus:249 P.jiroveci:58

P67873              	100.00%		L0PAQ7              	100.00%
Bootstrap support for P67873 as seed ortholog is 100%.
Bootstrap support for L0PAQ7 as seed ortholog is 97%.

Group of orthologs #590. Best score 248 bits
Score difference with first non-orthologous sequence - O.cuniculus:177 P.jiroveci:248

G1SCK8              	100.00%		L0PBS3              	100.00%
Bootstrap support for G1SCK8 as seed ortholog is 99%.
Bootstrap support for L0PBS3 as seed ortholog is 100%.

Group of orthologs #591. Best score 248 bits
Score difference with first non-orthologous sequence - O.cuniculus:248 P.jiroveci:248

G1SN07              	100.00%		L0PB86              	100.00%
Bootstrap support for G1SN07 as seed ortholog is 100%.
Bootstrap support for L0PB86 as seed ortholog is 100%.

Group of orthologs #592. Best score 248 bits
Score difference with first non-orthologous sequence - O.cuniculus:248 P.jiroveci:248

G1SJ57              	100.00%		L0PF44              	100.00%
Bootstrap support for G1SJ57 as seed ortholog is 100%.
Bootstrap support for L0PF44 as seed ortholog is 100%.

Group of orthologs #593. Best score 248 bits
Score difference with first non-orthologous sequence - O.cuniculus:248 P.jiroveci:248

G1SY88              	100.00%		L0PG86              	100.00%
Bootstrap support for G1SY88 as seed ortholog is 100%.
Bootstrap support for L0PG86 as seed ortholog is 100%.

Group of orthologs #594. Best score 246 bits
Score difference with first non-orthologous sequence - O.cuniculus:246 P.jiroveci:246

G1SJZ4              	100.00%		L0P9P0              	100.00%
Bootstrap support for G1SJZ4 as seed ortholog is 100%.
Bootstrap support for L0P9P0 as seed ortholog is 100%.

Group of orthologs #595. Best score 246 bits
Score difference with first non-orthologous sequence - O.cuniculus:246 P.jiroveci:246

G1TE97              	100.00%		L0P9R7              	100.00%
Bootstrap support for G1TE97 as seed ortholog is 100%.
Bootstrap support for L0P9R7 as seed ortholog is 100%.

Group of orthologs #596. Best score 246 bits
Score difference with first non-orthologous sequence - O.cuniculus:246 P.jiroveci:246

G1T937              	100.00%		L0PHK5              	100.00%
Bootstrap support for G1T937 as seed ortholog is 100%.
Bootstrap support for L0PHK5 as seed ortholog is 100%.

Group of orthologs #597. Best score 246 bits
Score difference with first non-orthologous sequence - O.cuniculus:246 P.jiroveci:246

G1TGK1              	100.00%		L0PCY0              	100.00%
Bootstrap support for G1TGK1 as seed ortholog is 100%.
Bootstrap support for L0PCY0 as seed ortholog is 100%.

Group of orthologs #598. Best score 245 bits
Score difference with first non-orthologous sequence - O.cuniculus:128 P.jiroveci:245

G1SG21              	100.00%		L0PDT4              	100.00%
G1T511              	100.00%		
Bootstrap support for G1SG21 as seed ortholog is 99%.
Bootstrap support for G1T511 as seed ortholog is 99%.
Bootstrap support for L0PDT4 as seed ortholog is 100%.

Group of orthologs #599. Best score 245 bits
Score difference with first non-orthologous sequence - O.cuniculus:245 P.jiroveci:90

G1SDU8              	100.00%		L0P9N8              	100.00%
Bootstrap support for G1SDU8 as seed ortholog is 100%.
Bootstrap support for L0P9N8 as seed ortholog is 97%.

Group of orthologs #600. Best score 245 bits
Score difference with first non-orthologous sequence - O.cuniculus:245 P.jiroveci:245

G1SP32              	100.00%		L0PBP9              	100.00%
Bootstrap support for G1SP32 as seed ortholog is 100%.
Bootstrap support for L0PBP9 as seed ortholog is 100%.

Group of orthologs #601. Best score 245 bits
Score difference with first non-orthologous sequence - O.cuniculus:245 P.jiroveci:174

G1SNJ2              	100.00%		L0PCG1              	100.00%
Bootstrap support for G1SNJ2 as seed ortholog is 100%.
Bootstrap support for L0PCG1 as seed ortholog is 99%.

Group of orthologs #602. Best score 245 bits
Score difference with first non-orthologous sequence - O.cuniculus:245 P.jiroveci:245

G1T5U1              	100.00%		L0PBQ9              	100.00%
Bootstrap support for G1T5U1 as seed ortholog is 100%.
Bootstrap support for L0PBQ9 as seed ortholog is 100%.

Group of orthologs #603. Best score 244 bits
Score difference with first non-orthologous sequence - O.cuniculus:244 P.jiroveci:244

G1SMZ0              	100.00%		L0PGN8              	100.00%
Bootstrap support for G1SMZ0 as seed ortholog is 100%.
Bootstrap support for L0PGN8 as seed ortholog is 100%.

Group of orthologs #604. Best score 244 bits
Score difference with first non-orthologous sequence - O.cuniculus:136 P.jiroveci:244

G1SU37              	100.00%		L0PCQ6              	100.00%
Bootstrap support for G1SU37 as seed ortholog is 99%.
Bootstrap support for L0PCQ6 as seed ortholog is 100%.

Group of orthologs #605. Best score 244 bits
Score difference with first non-orthologous sequence - O.cuniculus:171 P.jiroveci:244

G1TDP9              	100.00%		L0PGG0              	100.00%
Bootstrap support for G1TDP9 as seed ortholog is 100%.
Bootstrap support for L0PGG0 as seed ortholog is 100%.

Group of orthologs #606. Best score 243 bits
Score difference with first non-orthologous sequence - O.cuniculus:62 P.jiroveci:192

G1SW41              	100.00%		L0P876              	100.00%
G1SIQ0              	35.53%		
G1TUU7              	27.63%		
G1TZ44              	25.00%		
G1TNF3              	11.84%		
Bootstrap support for G1SW41 as seed ortholog is 99%.
Bootstrap support for L0P876 as seed ortholog is 100%.

Group of orthologs #607. Best score 243 bits
Score difference with first non-orthologous sequence - O.cuniculus:159 P.jiroveci:243

G1SWK8              	100.00%		L0PET2              	100.00%
G1SQU1              	15.03%		L0PAE5              	85.19%
Bootstrap support for G1SWK8 as seed ortholog is 100%.
Bootstrap support for L0PET2 as seed ortholog is 100%.

Group of orthologs #608. Best score 243 bits
Score difference with first non-orthologous sequence - O.cuniculus:243 P.jiroveci:243

G1SXK7              	100.00%		L0P9J6              	100.00%
                    	       		L0PH67              	86.69%
Bootstrap support for G1SXK7 as seed ortholog is 100%.
Bootstrap support for L0P9J6 as seed ortholog is 100%.

Group of orthologs #609. Best score 243 bits
Score difference with first non-orthologous sequence - O.cuniculus:243 P.jiroveci:243

G1SKL9              	100.00%		L0PES4              	100.00%
Bootstrap support for G1SKL9 as seed ortholog is 100%.
Bootstrap support for L0PES4 as seed ortholog is 100%.

Group of orthologs #610. Best score 243 bits
Score difference with first non-orthologous sequence - O.cuniculus:243 P.jiroveci:243

G1T330              	100.00%		L0PAG8              	100.00%
Bootstrap support for G1T330 as seed ortholog is 100%.
Bootstrap support for L0PAG8 as seed ortholog is 100%.

Group of orthologs #611. Best score 242 bits
Score difference with first non-orthologous sequence - O.cuniculus:242 P.jiroveci:242

G1SM72              	100.00%		L0PCR8              	100.00%
                    	       		L0PH75              	90.79%
Bootstrap support for G1SM72 as seed ortholog is 100%.
Bootstrap support for L0PCR8 as seed ortholog is 100%.

Group of orthologs #612. Best score 242 bits
Score difference with first non-orthologous sequence - O.cuniculus:242 P.jiroveci:242

G1T0C1              	100.00%		L0P7H2              	100.00%
G1SF30              	97.34%		
Bootstrap support for G1T0C1 as seed ortholog is 100%.
Bootstrap support for L0P7H2 as seed ortholog is 100%.

Group of orthologs #613. Best score 242 bits
Score difference with first non-orthologous sequence - O.cuniculus:242 P.jiroveci:242

G1TCF1              	100.00%		L0PD38              	100.00%
G1SNQ1              	30.06%		
Bootstrap support for G1TCF1 as seed ortholog is 100%.
Bootstrap support for L0PD38 as seed ortholog is 100%.

Group of orthologs #614. Best score 242 bits
Score difference with first non-orthologous sequence - O.cuniculus:242 P.jiroveci:242

G1TS29              	100.00%		L0PF73              	100.00%
P00939              	100.00%		
Bootstrap support for G1TS29 as seed ortholog is 100%.
Bootstrap support for P00939 as seed ortholog is 100%.
Bootstrap support for L0PF73 as seed ortholog is 100%.

Group of orthologs #615. Best score 242 bits
Score difference with first non-orthologous sequence - O.cuniculus:242 P.jiroveci:242

G1TDT4              	100.00%		L0PBG0              	100.00%
Bootstrap support for G1TDT4 as seed ortholog is 100%.
Bootstrap support for L0PBG0 as seed ortholog is 100%.

Group of orthologs #616. Best score 242 bits
Score difference with first non-orthologous sequence - O.cuniculus:242 P.jiroveci:242

P41035              	100.00%		L0P8F0              	100.00%
Bootstrap support for P41035 as seed ortholog is 100%.
Bootstrap support for L0P8F0 as seed ortholog is 100%.

Group of orthologs #617. Best score 241 bits
Score difference with first non-orthologous sequence - O.cuniculus:241 P.jiroveci:241

G1TCJ4              	100.00%		L0PGV2              	100.00%
                    	       		L0PG40              	62.01%
Bootstrap support for G1TCJ4 as seed ortholog is 100%.
Bootstrap support for L0PGV2 as seed ortholog is 100%.

Group of orthologs #618. Best score 241 bits
Score difference with first non-orthologous sequence - O.cuniculus:241 P.jiroveci:241

G1SNV9              	100.00%		L0PH54              	100.00%
Bootstrap support for G1SNV9 as seed ortholog is 100%.
Bootstrap support for L0PH54 as seed ortholog is 100%.

Group of orthologs #619. Best score 241 bits
Score difference with first non-orthologous sequence - O.cuniculus:241 P.jiroveci:241

G1TY86              	100.00%		L0P784              	100.00%
Bootstrap support for G1TY86 as seed ortholog is 100%.
Bootstrap support for L0P784 as seed ortholog is 100%.

Group of orthologs #620. Best score 240 bits
Score difference with first non-orthologous sequence - O.cuniculus:240 P.jiroveci:240

G1U5S7              	100.00%		L0PGQ4              	100.00%
Bootstrap support for G1U5S7 as seed ortholog is 100%.
Bootstrap support for L0PGQ4 as seed ortholog is 100%.

Group of orthologs #621. Best score 239 bits
Score difference with first non-orthologous sequence - O.cuniculus:139 P.jiroveci:239

G1TWE0              	100.00%		L0P9F9              	100.00%
Bootstrap support for G1TWE0 as seed ortholog is 100%.
Bootstrap support for L0P9F9 as seed ortholog is 100%.

Group of orthologs #622. Best score 238 bits
Score difference with first non-orthologous sequence - O.cuniculus:238 P.jiroveci:238

G1SCY7              	100.00%		L0PHL0              	100.00%
Bootstrap support for G1SCY7 as seed ortholog is 100%.
Bootstrap support for L0PHL0 as seed ortholog is 100%.

Group of orthologs #623. Best score 237 bits
Score difference with first non-orthologous sequence - O.cuniculus:161 P.jiroveci:163

G1SD50              	100.00%		L0PFE3              	100.00%
G1TEB6              	43.66%		
G1SJA1              	41.29%		
G1SZR1              	38.93%		
Bootstrap support for G1SD50 as seed ortholog is 99%.
Bootstrap support for L0PFE3 as seed ortholog is 99%.

Group of orthologs #624. Best score 237 bits
Score difference with first non-orthologous sequence - O.cuniculus:237 P.jiroveci:237

G1SZI5              	100.00%		L0PE58              	100.00%
G1TPG3              	100.00%		
Bootstrap support for G1SZI5 as seed ortholog is 100%.
Bootstrap support for G1TPG3 as seed ortholog is 100%.
Bootstrap support for L0PE58 as seed ortholog is 100%.

Group of orthologs #625. Best score 237 bits
Score difference with first non-orthologous sequence - O.cuniculus:237 P.jiroveci:237

G1SHH6              	100.00%		L0PDI2              	100.00%
Bootstrap support for G1SHH6 as seed ortholog is 100%.
Bootstrap support for L0PDI2 as seed ortholog is 100%.

Group of orthologs #626. Best score 237 bits
Score difference with first non-orthologous sequence - O.cuniculus:128 P.jiroveci:237

G1SMR7              	100.00%		L0PBZ6              	100.00%
Bootstrap support for G1SMR7 as seed ortholog is 100%.
Bootstrap support for L0PBZ6 as seed ortholog is 100%.

Group of orthologs #627. Best score 237 bits
Score difference with first non-orthologous sequence - O.cuniculus:93 P.jiroveci:192

G1T4E8              	100.00%		L0PA17              	100.00%
Bootstrap support for G1T4E8 as seed ortholog is 99%.
Bootstrap support for L0PA17 as seed ortholog is 100%.

Group of orthologs #628. Best score 237 bits
Score difference with first non-orthologous sequence - O.cuniculus:237 P.jiroveci:237

G1TA64              	100.00%		L0PAZ5              	100.00%
Bootstrap support for G1TA64 as seed ortholog is 100%.
Bootstrap support for L0PAZ5 as seed ortholog is 100%.

Group of orthologs #629. Best score 237 bits
Score difference with first non-orthologous sequence - O.cuniculus:116 P.jiroveci:156

G1U7P6              	100.00%		L0PGN9              	100.00%
Bootstrap support for G1U7P6 as seed ortholog is 99%.
Bootstrap support for L0PGN9 as seed ortholog is 99%.

Group of orthologs #630. Best score 236 bits
Score difference with first non-orthologous sequence - O.cuniculus:101 P.jiroveci:236

G1SRV1              	100.00%		L0PEJ9              	100.00%
G1U5L2              	26.52%		
Bootstrap support for G1SRV1 as seed ortholog is 99%.
Bootstrap support for L0PEJ9 as seed ortholog is 100%.

Group of orthologs #631. Best score 236 bits
Score difference with first non-orthologous sequence - O.cuniculus:236 P.jiroveci:236

G1U034              	100.00%		L0PDT2              	100.00%
P62497              	85.47%		
Bootstrap support for G1U034 as seed ortholog is 100%.
Bootstrap support for L0PDT2 as seed ortholog is 100%.

Group of orthologs #632. Best score 235 bits
Score difference with first non-orthologous sequence - O.cuniculus:235 P.jiroveci:235

G1SRF5              	100.00%		L0P9Q8              	100.00%
G1U1K2              	49.55%		
G1T5S2              	32.63%		
Bootstrap support for G1SRF5 as seed ortholog is 100%.
Bootstrap support for L0P9Q8 as seed ortholog is 100%.

Group of orthologs #633. Best score 235 bits
Score difference with first non-orthologous sequence - O.cuniculus:235 P.jiroveci:235

G1SGM2              	100.00%		L0PG68              	100.00%
Bootstrap support for G1SGM2 as seed ortholog is 100%.
Bootstrap support for L0PG68 as seed ortholog is 100%.

Group of orthologs #634. Best score 235 bits
Score difference with first non-orthologous sequence - O.cuniculus:235 P.jiroveci:235

G1SP34              	100.00%		L0P9N2              	100.00%
Bootstrap support for G1SP34 as seed ortholog is 100%.
Bootstrap support for L0P9N2 as seed ortholog is 100%.

Group of orthologs #635. Best score 235 bits
Score difference with first non-orthologous sequence - O.cuniculus:235 P.jiroveci:235

G1SQU6              	100.00%		L0PBA4              	100.00%
Bootstrap support for G1SQU6 as seed ortholog is 100%.
Bootstrap support for L0PBA4 as seed ortholog is 100%.

Group of orthologs #636. Best score 233 bits
Score difference with first non-orthologous sequence - O.cuniculus:58 P.jiroveci:233

G1TN08              	100.00%		L0PC75              	100.00%
G1T5W9              	86.25%		
G1SX72              	47.50%		
G1U0A2              	26.88%		
G1TMX4              	22.50%		
Bootstrap support for G1TN08 as seed ortholog is 99%.
Bootstrap support for L0PC75 as seed ortholog is 100%.

Group of orthologs #637. Best score 233 bits
Score difference with first non-orthologous sequence - O.cuniculus:233 P.jiroveci:233

B7NZD2              	100.00%		L0P8K8              	100.00%
Bootstrap support for B7NZD2 as seed ortholog is 100%.
Bootstrap support for L0P8K8 as seed ortholog is 100%.

Group of orthologs #638. Best score 233 bits
Score difference with first non-orthologous sequence - O.cuniculus:233 P.jiroveci:233

G1SJS2              	100.00%		L0P834              	100.00%
Bootstrap support for G1SJS2 as seed ortholog is 100%.
Bootstrap support for L0P834 as seed ortholog is 100%.

Group of orthologs #639. Best score 233 bits
Score difference with first non-orthologous sequence - O.cuniculus:233 P.jiroveci:233

G1SNW2              	100.00%		L0P9L7              	100.00%
Bootstrap support for G1SNW2 as seed ortholog is 100%.
Bootstrap support for L0P9L7 as seed ortholog is 100%.

Group of orthologs #640. Best score 233 bits
Score difference with first non-orthologous sequence - O.cuniculus:233 P.jiroveci:233

G1TAI3              	100.00%		L0PBZ1              	100.00%
Bootstrap support for G1TAI3 as seed ortholog is 100%.
Bootstrap support for L0PBZ1 as seed ortholog is 100%.

Group of orthologs #641. Best score 233 bits
Score difference with first non-orthologous sequence - O.cuniculus:186 P.jiroveci:233

G1TA04              	100.00%		L0PG93              	100.00%
Bootstrap support for G1TA04 as seed ortholog is 100%.
Bootstrap support for L0PG93 as seed ortholog is 100%.

Group of orthologs #642. Best score 232 bits
Score difference with first non-orthologous sequence - O.cuniculus:118 P.jiroveci:232

G1SZW7              	100.00%		L0PCI8              	100.00%
G1STH7              	47.91%		
G1SF09              	35.98%		
G1TVK7              	6.69%		
Bootstrap support for G1SZW7 as seed ortholog is 99%.
Bootstrap support for L0PCI8 as seed ortholog is 100%.

Group of orthologs #643. Best score 232 bits
Score difference with first non-orthologous sequence - O.cuniculus:232 P.jiroveci:232

G1T3A0              	100.00%		L0PD44              	100.00%
Bootstrap support for G1T3A0 as seed ortholog is 100%.
Bootstrap support for L0PD44 as seed ortholog is 100%.

Group of orthologs #644. Best score 232 bits
Score difference with first non-orthologous sequence - O.cuniculus:232 P.jiroveci:232

G1TSL5              	100.00%		L0P9K2              	100.00%
Bootstrap support for G1TSL5 as seed ortholog is 100%.
Bootstrap support for L0P9K2 as seed ortholog is 100%.

Group of orthologs #645. Best score 231 bits
Score difference with first non-orthologous sequence - O.cuniculus:147 P.jiroveci:231

G1T695              	100.00%		L0PFZ1              	100.00%
G1SPB8              	44.89%		
G1U7D6              	15.49%		
Bootstrap support for G1T695 as seed ortholog is 99%.
Bootstrap support for L0PFZ1 as seed ortholog is 100%.

Group of orthologs #646. Best score 231 bits
Score difference with first non-orthologous sequence - O.cuniculus:231 P.jiroveci:231

G1T6J8              	100.00%		L0PBC7              	100.00%
Bootstrap support for G1T6J8 as seed ortholog is 100%.
Bootstrap support for L0PBC7 as seed ortholog is 100%.

Group of orthologs #647. Best score 230 bits
Score difference with first non-orthologous sequence - O.cuniculus:230 P.jiroveci:230

G1U0N1              	100.00%		L0P9G1              	100.00%
Bootstrap support for G1U0N1 as seed ortholog is 100%.
Bootstrap support for L0P9G1 as seed ortholog is 100%.

Group of orthologs #648. Best score 229 bits
Score difference with first non-orthologous sequence - O.cuniculus:60 P.jiroveci:229

G1SZ47              	100.00%		L0PHL1              	100.00%
G1U046              	100.00%		
G1TZC6              	85.48%		
Bootstrap support for G1SZ47 as seed ortholog is 99%.
Bootstrap support for G1U046 as seed ortholog is 99%.
Bootstrap support for L0PHL1 as seed ortholog is 100%.

Group of orthologs #649. Best score 228 bits
Score difference with first non-orthologous sequence - O.cuniculus:62 P.jiroveci:177

G1SCX0              	100.00%		L0PHH9              	100.00%
G1TJY5              	64.06%		
Bootstrap support for G1SCX0 as seed ortholog is 99%.
Bootstrap support for L0PHH9 as seed ortholog is 100%.

Group of orthologs #650. Best score 228 bits
Score difference with first non-orthologous sequence - O.cuniculus:228 P.jiroveci:228

P34826              	100.00%		L0PA86              	100.00%
G1TQR2              	99.11%		
Bootstrap support for P34826 as seed ortholog is 100%.
Bootstrap support for L0PA86 as seed ortholog is 100%.

Group of orthologs #651. Best score 228 bits
Score difference with first non-orthologous sequence - O.cuniculus:149 P.jiroveci:228

G1SJP7              	100.00%		L0P9I3              	100.00%
Bootstrap support for G1SJP7 as seed ortholog is 100%.
Bootstrap support for L0P9I3 as seed ortholog is 100%.

Group of orthologs #652. Best score 228 bits
Score difference with first non-orthologous sequence - O.cuniculus:228 P.jiroveci:228

G1U5D4              	100.00%		L0PEW5              	100.00%
Bootstrap support for G1U5D4 as seed ortholog is 100%.
Bootstrap support for L0PEW5 as seed ortholog is 100%.

Group of orthologs #653. Best score 227 bits
Score difference with first non-orthologous sequence - O.cuniculus:45 P.jiroveci:78

G1T567              	100.00%		L0PGE5              	100.00%
G1TQ45              	62.72%		
G1TFK6              	62.13%		
G1TQZ8              	62.13%		
G1TTV0              	61.54%		
G1TGR0              	60.95%		
G1TI18              	37.87%		
Bootstrap support for G1T567 as seed ortholog is 97%.
Bootstrap support for L0PGE5 as seed ortholog is 99%.

Group of orthologs #654. Best score 227 bits
Score difference with first non-orthologous sequence - O.cuniculus:227 P.jiroveci:227

G1THM7              	100.00%		L0P7L7              	100.00%
G1TIA0              	71.91%		
Bootstrap support for G1THM7 as seed ortholog is 100%.
Bootstrap support for L0P7L7 as seed ortholog is 100%.

Group of orthologs #655. Best score 227 bits
Score difference with first non-orthologous sequence - O.cuniculus:227 P.jiroveci:227

G1SJ42              	100.00%		L0PDH2              	100.00%
Bootstrap support for G1SJ42 as seed ortholog is 100%.
Bootstrap support for L0PDH2 as seed ortholog is 100%.

Group of orthologs #656. Best score 227 bits
Score difference with first non-orthologous sequence - O.cuniculus:227 P.jiroveci:91

G1T425              	100.00%		L0PA05              	100.00%
Bootstrap support for G1T425 as seed ortholog is 100%.
Bootstrap support for L0PA05 as seed ortholog is 99%.

Group of orthologs #657. Best score 227 bits
Score difference with first non-orthologous sequence - O.cuniculus:227 P.jiroveci:227

G1T8V6              	100.00%		L0P9Y7              	100.00%
Bootstrap support for G1T8V6 as seed ortholog is 100%.
Bootstrap support for L0P9Y7 as seed ortholog is 100%.

Group of orthologs #658. Best score 227 bits
Score difference with first non-orthologous sequence - O.cuniculus:227 P.jiroveci:8

Q28717              	100.00%		L0PD43              	100.00%
Bootstrap support for Q28717 as seed ortholog is 100%.
Bootstrap support for L0PD43 as seed ortholog is 64%.
Alternative seed ortholog is L0PB48 (8 bits away from this cluster)

Group of orthologs #659. Best score 225 bits
Score difference with first non-orthologous sequence - O.cuniculus:99 P.jiroveci:225

G1TVT6              	100.00%		L0PGY0              	100.00%
G1SEU5              	94.97%		
G1TRV3              	94.97%		
G1U473              	93.71%		
G1TR75              	92.45%		
G1U1D8              	91.82%		
G1THF3              	76.10%		
G1TNF2              	73.58%		
Bootstrap support for G1TVT6 as seed ortholog is 100%.
Bootstrap support for L0PGY0 as seed ortholog is 100%.

Group of orthologs #660. Best score 225 bits
Score difference with first non-orthologous sequence - O.cuniculus:225 P.jiroveci:225

G1SR70              	100.00%		L0PH55              	100.00%
G1TUJ2              	94.75%		
G1TY63              	84.59%		
Bootstrap support for G1SR70 as seed ortholog is 100%.
Bootstrap support for L0PH55 as seed ortholog is 100%.

Group of orthologs #661. Best score 225 bits
Score difference with first non-orthologous sequence - O.cuniculus:225 P.jiroveci:225

G1T3G1              	100.00%		L0P968              	100.00%
G1T6F4              	8.02%		
Bootstrap support for G1T3G1 as seed ortholog is 100%.
Bootstrap support for L0P968 as seed ortholog is 100%.

Group of orthologs #662. Best score 225 bits
Score difference with first non-orthologous sequence - O.cuniculus:225 P.jiroveci:225

G1SDK8              	100.00%		L0P901              	100.00%
Bootstrap support for G1SDK8 as seed ortholog is 100%.
Bootstrap support for L0P901 as seed ortholog is 100%.

Group of orthologs #663. Best score 225 bits
Score difference with first non-orthologous sequence - O.cuniculus:225 P.jiroveci:225

G1SK16              	100.00%		L0PBT0              	100.00%
Bootstrap support for G1SK16 as seed ortholog is 100%.
Bootstrap support for L0PBT0 as seed ortholog is 100%.

Group of orthologs #664. Best score 225 bits
Score difference with first non-orthologous sequence - O.cuniculus:225 P.jiroveci:225

G1SP51              	100.00%		L0PBS5              	100.00%
Bootstrap support for G1SP51 as seed ortholog is 100%.
Bootstrap support for L0PBS5 as seed ortholog is 100%.

Group of orthologs #665. Best score 225 bits
Score difference with first non-orthologous sequence - O.cuniculus:151 P.jiroveci:225

G1ST93              	100.00%		L0PDB9              	100.00%
Bootstrap support for G1ST93 as seed ortholog is 99%.
Bootstrap support for L0PDB9 as seed ortholog is 100%.

Group of orthologs #666. Best score 225 bits
Score difference with first non-orthologous sequence - O.cuniculus:126 P.jiroveci:225

G1T8H5              	100.00%		L0PEQ4              	100.00%
Bootstrap support for G1T8H5 as seed ortholog is 99%.
Bootstrap support for L0PEQ4 as seed ortholog is 100%.

Group of orthologs #667. Best score 224 bits
Score difference with first non-orthologous sequence - O.cuniculus:224 P.jiroveci:224

G1SGK3              	100.00%		L0P9G0              	100.00%
G1TD47              	34.46%		
G1SUX5              	19.52%		
G1TU75              	18.92%		
G1T6H4              	16.82%		
G1T4R9              	11.11%		
G1TVF7              	10.66%		
G1SSV4              	9.83%		
G1SZX7              	7.96%		
Bootstrap support for G1SGK3 as seed ortholog is 100%.
Bootstrap support for L0P9G0 as seed ortholog is 100%.

Group of orthologs #668. Best score 224 bits
Score difference with first non-orthologous sequence - O.cuniculus:39 P.jiroveci:19

G1SFU5              	100.00%		L0PFJ7              	100.00%
G1SLK8              	30.23%		
Bootstrap support for G1SFU5 as seed ortholog is 85%.
Bootstrap support for L0PFJ7 as seed ortholog is 54%.
Alternative seed ortholog is L0PBC8 (19 bits away from this cluster)

Group of orthologs #669. Best score 224 bits
Score difference with first non-orthologous sequence - O.cuniculus:224 P.jiroveci:224

G1T3E6              	100.00%		L0PEC6              	100.00%
Bootstrap support for G1T3E6 as seed ortholog is 100%.
Bootstrap support for L0PEC6 as seed ortholog is 100%.

Group of orthologs #670. Best score 223 bits
Score difference with first non-orthologous sequence - O.cuniculus:150 P.jiroveci:223

G1SF32              	100.00%		L0PGD9              	100.00%
Bootstrap support for G1SF32 as seed ortholog is 99%.
Bootstrap support for L0PGD9 as seed ortholog is 100%.

Group of orthologs #671. Best score 223 bits
Score difference with first non-orthologous sequence - O.cuniculus:223 P.jiroveci:223

G1T057              	100.00%		L0PET6              	100.00%
Bootstrap support for G1T057 as seed ortholog is 100%.
Bootstrap support for L0PET6 as seed ortholog is 100%.

Group of orthologs #672. Best score 222 bits
Score difference with first non-orthologous sequence - O.cuniculus:222 P.jiroveci:222

G1TA25              	100.00%		L0PI61              	100.00%
G1SCX1              	58.29%		L0PA50              	18.89%
G1SLK6              	49.76%		
Bootstrap support for G1TA25 as seed ortholog is 100%.
Bootstrap support for L0PI61 as seed ortholog is 100%.

Group of orthologs #673. Best score 222 bits
Score difference with first non-orthologous sequence - O.cuniculus:100 P.jiroveci:222

G1SG48              	100.00%		L0P848              	100.00%
G1TDM8              	38.91%		L0P867              	89.64%
Bootstrap support for G1SG48 as seed ortholog is 99%.
Bootstrap support for L0P848 as seed ortholog is 100%.

Group of orthologs #674. Best score 222 bits
Score difference with first non-orthologous sequence - O.cuniculus:222 P.jiroveci:222

G1SJK5              	100.00%		L0PCJ8              	100.00%
Bootstrap support for G1SJK5 as seed ortholog is 100%.
Bootstrap support for L0PCJ8 as seed ortholog is 100%.

Group of orthologs #675. Best score 222 bits
Score difference with first non-orthologous sequence - O.cuniculus:103 P.jiroveci:222

G1SKD2              	100.00%		L0PE21              	100.00%
Bootstrap support for G1SKD2 as seed ortholog is 99%.
Bootstrap support for L0PE21 as seed ortholog is 100%.

Group of orthologs #676. Best score 222 bits
Score difference with first non-orthologous sequence - O.cuniculus:222 P.jiroveci:222

G1SSF0              	100.00%		L0PGE7              	100.00%
Bootstrap support for G1SSF0 as seed ortholog is 100%.
Bootstrap support for L0PGE7 as seed ortholog is 100%.

Group of orthologs #677. Best score 222 bits
Score difference with first non-orthologous sequence - O.cuniculus:156 P.jiroveci:222

G1T3H5              	100.00%		L0PBD5              	100.00%
Bootstrap support for G1T3H5 as seed ortholog is 99%.
Bootstrap support for L0PBD5 as seed ortholog is 100%.

Group of orthologs #678. Best score 222 bits
Score difference with first non-orthologous sequence - O.cuniculus:222 P.jiroveci:222

G1TET6              	100.00%		L0PDP2              	100.00%
Bootstrap support for G1TET6 as seed ortholog is 100%.
Bootstrap support for L0PDP2 as seed ortholog is 100%.

Group of orthologs #679. Best score 222 bits
Score difference with first non-orthologous sequence - O.cuniculus:137 P.jiroveci:222

G1U0Q2              	100.00%		L0PAE8              	100.00%
Bootstrap support for G1U0Q2 as seed ortholog is 100%.
Bootstrap support for L0PAE8 as seed ortholog is 100%.

Group of orthologs #680. Best score 222 bits
Score difference with first non-orthologous sequence - O.cuniculus:222 P.jiroveci:222

Q28690              	100.00%		L0PG39              	100.00%
Bootstrap support for Q28690 as seed ortholog is 100%.
Bootstrap support for L0PG39 as seed ortholog is 100%.

Group of orthologs #681. Best score 221 bits
Score difference with first non-orthologous sequence - O.cuniculus:121 P.jiroveci:221

G1SXU5              	100.00%		L0PE77              	100.00%
Bootstrap support for G1SXU5 as seed ortholog is 100%.
Bootstrap support for L0PE77 as seed ortholog is 100%.

Group of orthologs #682. Best score 221 bits
Score difference with first non-orthologous sequence - O.cuniculus:221 P.jiroveci:221

G1T7J7              	100.00%		L0P8Q5              	100.00%
Bootstrap support for G1T7J7 as seed ortholog is 100%.
Bootstrap support for L0P8Q5 as seed ortholog is 100%.

Group of orthologs #683. Best score 220 bits
Score difference with first non-orthologous sequence - O.cuniculus:78 P.jiroveci:161

P62493              	100.00%		L0PHW8              	100.00%
G1TH86              	38.10%		
P46629              	16.67%		
Bootstrap support for P62493 as seed ortholog is 99%.
Bootstrap support for L0PHW8 as seed ortholog is 100%.

Group of orthologs #684. Best score 220 bits
Score difference with first non-orthologous sequence - O.cuniculus:220 P.jiroveci:220

G1THB2              	100.00%		L0PA92              	100.00%
                    	       		L0P8X8              	41.18%
Bootstrap support for G1THB2 as seed ortholog is 100%.
Bootstrap support for L0PA92 as seed ortholog is 100%.

Group of orthologs #685. Best score 220 bits
Score difference with first non-orthologous sequence - O.cuniculus:114 P.jiroveci:220

G1TUG7              	100.00%		L0PFR9              	100.00%
G1SGI2              	72.86%		
Bootstrap support for G1TUG7 as seed ortholog is 99%.
Bootstrap support for L0PFR9 as seed ortholog is 100%.

Group of orthologs #686. Best score 220 bits
Score difference with first non-orthologous sequence - O.cuniculus:220 P.jiroveci:220

G1T2U1              	100.00%		L0PA94              	100.00%
Bootstrap support for G1T2U1 as seed ortholog is 100%.
Bootstrap support for L0PA94 as seed ortholog is 100%.

Group of orthologs #687. Best score 219 bits
Score difference with first non-orthologous sequence - O.cuniculus:116 P.jiroveci:219

G1TC10              	100.00%		L0PD63              	100.00%
Bootstrap support for G1TC10 as seed ortholog is 99%.
Bootstrap support for L0PD63 as seed ortholog is 100%.

Group of orthologs #688. Best score 218 bits
Score difference with first non-orthologous sequence - O.cuniculus:144 P.jiroveci:218

G1SHV9              	100.00%		L0PB84              	100.00%
Bootstrap support for G1SHV9 as seed ortholog is 100%.
Bootstrap support for L0PB84 as seed ortholog is 100%.

Group of orthologs #689. Best score 218 bits
Score difference with first non-orthologous sequence - O.cuniculus:218 P.jiroveci:218

G1SQB6              	100.00%		L0PCU0              	100.00%
Bootstrap support for G1SQB6 as seed ortholog is 100%.
Bootstrap support for L0PCU0 as seed ortholog is 100%.

Group of orthologs #690. Best score 217 bits
Score difference with first non-orthologous sequence - O.cuniculus:217 P.jiroveci:217

G1TD91              	100.00%		L0PDX6              	100.00%
G1TQQ3              	97.28%		
G1TSJ3              	89.11%		
Bootstrap support for G1TD91 as seed ortholog is 100%.
Bootstrap support for L0PDX6 as seed ortholog is 100%.

Group of orthologs #691. Best score 217 bits
Score difference with first non-orthologous sequence - O.cuniculus:217 P.jiroveci:217

G1SCS9              	100.00%		L0PC20              	100.00%
G1SW09              	30.61%		
Bootstrap support for G1SCS9 as seed ortholog is 100%.
Bootstrap support for L0PC20 as seed ortholog is 100%.

Group of orthologs #692. Best score 217 bits
Score difference with first non-orthologous sequence - O.cuniculus:217 P.jiroveci:217

G1TAM0              	100.00%		L0PFE6              	100.00%
G1TDR6              	26.36%		
Bootstrap support for G1TAM0 as seed ortholog is 100%.
Bootstrap support for L0PFE6 as seed ortholog is 100%.

Group of orthologs #693. Best score 217 bits
Score difference with first non-orthologous sequence - O.cuniculus:79 P.jiroveci:217

G1SYI1              	100.00%		L0PAG1              	100.00%
Bootstrap support for G1SYI1 as seed ortholog is 97%.
Bootstrap support for L0PAG1 as seed ortholog is 100%.

Group of orthologs #694. Best score 217 bits
Score difference with first non-orthologous sequence - O.cuniculus:143 P.jiroveci:217

G1T237              	100.00%		L0PAW4              	100.00%
Bootstrap support for G1T237 as seed ortholog is 100%.
Bootstrap support for L0PAW4 as seed ortholog is 100%.

Group of orthologs #695. Best score 216 bits
Score difference with first non-orthologous sequence - O.cuniculus:216 P.jiroveci:216

G1SS70              	100.00%		L0PFL8              	100.00%
G1TN72              	98.41%		
G1U444              	98.41%		
G1U877              	97.78%		
G1STH1              	97.14%		
G1TKM8              	93.97%		
G1U482              	91.43%		
G1U4F1              	24.76%		
Bootstrap support for G1SS70 as seed ortholog is 100%.
Bootstrap support for L0PFL8 as seed ortholog is 100%.

Group of orthologs #696. Best score 216 bits
Score difference with first non-orthologous sequence - O.cuniculus:216 P.jiroveci:216

G1SJQ6              	100.00%		L0PCF4              	100.00%
                    	       		L0P926              	60.57%
Bootstrap support for G1SJQ6 as seed ortholog is 100%.
Bootstrap support for L0PCF4 as seed ortholog is 100%.

Group of orthologs #697. Best score 215 bits
Score difference with first non-orthologous sequence - O.cuniculus:215 P.jiroveci:215

P10160              	100.00%		L0PD65              	100.00%
G1T916              	78.95%		
G1TC37              	52.63%		
G1TXR9              	43.16%		
Bootstrap support for P10160 as seed ortholog is 100%.
Bootstrap support for L0PD65 as seed ortholog is 100%.

Group of orthologs #698. Best score 215 bits
Score difference with first non-orthologous sequence - O.cuniculus:215 P.jiroveci:215

G1SM51              	100.00%		L0P9U1              	100.00%
Bootstrap support for G1SM51 as seed ortholog is 100%.
Bootstrap support for L0P9U1 as seed ortholog is 100%.

Group of orthologs #699. Best score 215 bits
Score difference with first non-orthologous sequence - O.cuniculus:215 P.jiroveci:112

G1SYF8              	100.00%		L0PDR1              	100.00%
Bootstrap support for G1SYF8 as seed ortholog is 100%.
Bootstrap support for L0PDR1 as seed ortholog is 99%.

Group of orthologs #700. Best score 215 bits
Score difference with first non-orthologous sequence - O.cuniculus:57 P.jiroveci:215

G1T1B7              	100.00%		L0PDB8              	100.00%
Bootstrap support for G1T1B7 as seed ortholog is 96%.
Bootstrap support for L0PDB8 as seed ortholog is 100%.

Group of orthologs #701. Best score 215 bits
Score difference with first non-orthologous sequence - O.cuniculus:84 P.jiroveci:215

G1TE27              	100.00%		L0PGL3              	100.00%
Bootstrap support for G1TE27 as seed ortholog is 97%.
Bootstrap support for L0PGL3 as seed ortholog is 100%.

Group of orthologs #702. Best score 214 bits
Score difference with first non-orthologous sequence - O.cuniculus:214 P.jiroveci:214

G1ST38              	100.00%		L0PD58              	100.00%
Bootstrap support for G1ST38 as seed ortholog is 100%.
Bootstrap support for L0PD58 as seed ortholog is 100%.

Group of orthologs #703. Best score 213 bits
Score difference with first non-orthologous sequence - O.cuniculus:213 P.jiroveci:213

G1ST63              	100.00%		L0P910              	100.00%
G1TLG5              	98.85%		
Bootstrap support for G1ST63 as seed ortholog is 100%.
Bootstrap support for L0P910 as seed ortholog is 100%.

Group of orthologs #704. Best score 212 bits
Score difference with first non-orthologous sequence - O.cuniculus:110 P.jiroveci:81

G1TCE2              	100.00%		L0PDS3              	100.00%
G1TV68              	36.92%		
G1T705              	36.67%		
Bootstrap support for G1TCE2 as seed ortholog is 99%.
Bootstrap support for L0PDS3 as seed ortholog is 97%.

Group of orthologs #705. Best score 212 bits
Score difference with first non-orthologous sequence - O.cuniculus:212 P.jiroveci:212

G1SWV9              	100.00%		L0PDL5              	100.00%
G1SEF8              	71.76%		
Bootstrap support for G1SWV9 as seed ortholog is 100%.
Bootstrap support for L0PDL5 as seed ortholog is 100%.

Group of orthologs #706. Best score 212 bits
Score difference with first non-orthologous sequence - O.cuniculus:212 P.jiroveci:212

G1T433              	100.00%		L0PAJ0              	100.00%
G1TKG0              	49.67%		
Bootstrap support for G1T433 as seed ortholog is 100%.
Bootstrap support for L0PAJ0 as seed ortholog is 100%.

Group of orthologs #707. Best score 212 bits
Score difference with first non-orthologous sequence - O.cuniculus:140 P.jiroveci:137

G1SIQ9              	100.00%		L0PDB2              	100.00%
Bootstrap support for G1SIQ9 as seed ortholog is 99%.
Bootstrap support for L0PDB2 as seed ortholog is 99%.

Group of orthologs #708. Best score 212 bits
Score difference with first non-orthologous sequence - O.cuniculus:212 P.jiroveci:212

G1SHH1              	100.00%		L0PEL2              	100.00%
Bootstrap support for G1SHH1 as seed ortholog is 100%.
Bootstrap support for L0PEL2 as seed ortholog is 100%.

Group of orthologs #709. Best score 212 bits
Score difference with first non-orthologous sequence - O.cuniculus:212 P.jiroveci:212

G1T9D9              	100.00%		L0PBK8              	100.00%
Bootstrap support for G1T9D9 as seed ortholog is 100%.
Bootstrap support for L0PBK8 as seed ortholog is 100%.

Group of orthologs #710. Best score 212 bits
Score difference with first non-orthologous sequence - O.cuniculus:212 P.jiroveci:212

G1TBK2              	100.00%		L0PGJ8              	100.00%
Bootstrap support for G1TBK2 as seed ortholog is 100%.
Bootstrap support for L0PGJ8 as seed ortholog is 100%.

Group of orthologs #711. Best score 212 bits
Score difference with first non-orthologous sequence - O.cuniculus:212 P.jiroveci:212

G1TCS2              	100.00%		L0PFS1              	100.00%
Bootstrap support for G1TCS2 as seed ortholog is 100%.
Bootstrap support for L0PFS1 as seed ortholog is 100%.

Group of orthologs #712. Best score 211 bits
Score difference with first non-orthologous sequence - O.cuniculus:92 P.jiroveci:211

G1SF63              	100.00%		L0PG76              	100.00%
                    	       		L0PE70              	51.61%
Bootstrap support for G1SF63 as seed ortholog is 99%.
Bootstrap support for L0PG76 as seed ortholog is 100%.

Group of orthologs #713. Best score 211 bits
Score difference with first non-orthologous sequence - O.cuniculus:78 P.jiroveci:130

G1U863              	100.00%		L0PFI0              	100.00%
G1T2I3              	38.28%		
Bootstrap support for G1U863 as seed ortholog is 94%.
Bootstrap support for L0PFI0 as seed ortholog is 99%.

Group of orthologs #714. Best score 211 bits
Score difference with first non-orthologous sequence - O.cuniculus:61 P.jiroveci:115

Q95221              	100.00%		L0PFD8              	100.00%
G1TQD6              	22.34%		
Bootstrap support for Q95221 as seed ortholog is 93%.
Bootstrap support for L0PFD8 as seed ortholog is 99%.

Group of orthologs #715. Best score 211 bits
Score difference with first non-orthologous sequence - O.cuniculus:81 P.jiroveci:211

G1SJN2              	100.00%		L0PCY2              	100.00%
Bootstrap support for G1SJN2 as seed ortholog is 92%.
Bootstrap support for L0PCY2 as seed ortholog is 100%.

Group of orthologs #716. Best score 210 bits
Score difference with first non-orthologous sequence - O.cuniculus:210 P.jiroveci:210

G1SFA6              	100.00%		L0PFP0              	100.00%
G1T847              	96.28%		
G1SSH5              	68.77%		
G1SPZ8              	31.41%		
G1T4U8              	29.00%		
Bootstrap support for G1SFA6 as seed ortholog is 100%.
Bootstrap support for L0PFP0 as seed ortholog is 100%.

Group of orthologs #717. Best score 210 bits
Score difference with first non-orthologous sequence - O.cuniculus:87 P.jiroveci:103

G1T1Q2              	100.00%		L0PFN2              	100.00%
P62160              	100.00%		
Bootstrap support for G1T1Q2 as seed ortholog is 100%.
Bootstrap support for P62160 as seed ortholog is 100%.
Bootstrap support for L0PFN2 as seed ortholog is 100%.

Group of orthologs #718. Best score 209 bits
Score difference with first non-orthologous sequence - O.cuniculus:209 P.jiroveci:209

G1TJW1              	100.00%		L0PC53              	100.00%
G1T3D9              	81.36%		
Bootstrap support for G1TJW1 as seed ortholog is 100%.
Bootstrap support for L0PC53 as seed ortholog is 100%.

Group of orthologs #719. Best score 209 bits
Score difference with first non-orthologous sequence - O.cuniculus:209 P.jiroveci:209

G1T0K5              	100.00%		L0PHH2              	100.00%
Bootstrap support for G1T0K5 as seed ortholog is 100%.
Bootstrap support for L0PHH2 as seed ortholog is 100%.

Group of orthologs #720. Best score 209 bits
Score difference with first non-orthologous sequence - O.cuniculus:209 P.jiroveci:209

G1T849              	100.00%		L0PCB3              	100.00%
Bootstrap support for G1T849 as seed ortholog is 100%.
Bootstrap support for L0PCB3 as seed ortholog is 100%.

Group of orthologs #721. Best score 208 bits
Score difference with first non-orthologous sequence - O.cuniculus:208 P.jiroveci:208

G1TGY0              	100.00%		L0PDJ6              	100.00%
G1SR83              	32.77%		
G1SS28              	14.29%		
Bootstrap support for G1TGY0 as seed ortholog is 100%.
Bootstrap support for L0PDJ6 as seed ortholog is 100%.

Group of orthologs #722. Best score 208 bits
Score difference with first non-orthologous sequence - O.cuniculus:121 P.jiroveci:100

G1U0F0              	100.00%		L0PDC4              	100.00%
                    	       		L0PBK4              	5.37%
Bootstrap support for G1U0F0 as seed ortholog is 99%.
Bootstrap support for L0PDC4 as seed ortholog is 96%.

Group of orthologs #723. Best score 207 bits
Score difference with first non-orthologous sequence - O.cuniculus:59 P.jiroveci:153

G1SRH5              	100.00%		L0P8M4              	100.00%
G1SRS3              	68.64%		
G1T5V3              	18.22%		
Bootstrap support for G1SRH5 as seed ortholog is 98%.
Bootstrap support for L0P8M4 as seed ortholog is 100%.

Group of orthologs #724. Best score 207 bits
Score difference with first non-orthologous sequence - O.cuniculus:83 P.jiroveci:207

G1TG89              	100.00%		L0PB66              	100.00%
G1TPZ0              	73.21%		
G1U2E1              	23.21%		
Bootstrap support for G1TG89 as seed ortholog is 99%.
Bootstrap support for L0PB66 as seed ortholog is 100%.

Group of orthologs #725. Best score 207 bits
Score difference with first non-orthologous sequence - O.cuniculus:207 P.jiroveci:207

G1SSM8              	100.00%		L0PAL5              	100.00%
Bootstrap support for G1SSM8 as seed ortholog is 100%.
Bootstrap support for L0PAL5 as seed ortholog is 100%.

Group of orthologs #726. Best score 206 bits
Score difference with first non-orthologous sequence - O.cuniculus:130 P.jiroveci:141

G1SPS0              	100.00%		L0PAZ8              	100.00%
Bootstrap support for G1SPS0 as seed ortholog is 99%.
Bootstrap support for L0PAZ8 as seed ortholog is 99%.

Group of orthologs #727. Best score 206 bits
Score difference with first non-orthologous sequence - O.cuniculus:45 P.jiroveci:78

G1TF11              	100.00%		L0PDN2              	100.00%
Bootstrap support for G1TF11 as seed ortholog is 85%.
Bootstrap support for L0PDN2 as seed ortholog is 96%.

Group of orthologs #728. Best score 205 bits
Score difference with first non-orthologous sequence - O.cuniculus:27 P.jiroveci:2

G1SHG7              	100.00%		L0PCN5              	100.00%
G1SKW2              	100.00%		L0P7B6              	92.66%
G1T1N2              	43.40%		
G1TI79              	43.02%		
G1SVT8              	14.53%		
G1SQT9              	9.81%		
G1SKV0              	7.17%		
Bootstrap support for G1SHG7 as seed ortholog is 76%.
Bootstrap support for G1SKW2 as seed ortholog is 76%.
Bootstrap support for L0PCN5 as seed ortholog is 54%.
Alternative seed ortholog is L0PGT4 (2 bits away from this cluster)

Group of orthologs #729. Best score 205 bits
Score difference with first non-orthologous sequence - O.cuniculus:137 P.jiroveci:205

G1T235              	100.00%		L0P839              	100.00%
G1SGW4              	20.22%		
Bootstrap support for G1T235 as seed ortholog is 100%.
Bootstrap support for L0P839 as seed ortholog is 100%.

Group of orthologs #730. Best score 205 bits
Score difference with first non-orthologous sequence - O.cuniculus:205 P.jiroveci:205

G1T0H7              	100.00%		L0PBN7              	100.00%
G1SI08              	9.68%		
Bootstrap support for G1T0H7 as seed ortholog is 100%.
Bootstrap support for L0PBN7 as seed ortholog is 100%.

Group of orthologs #731. Best score 205 bits
Score difference with first non-orthologous sequence - O.cuniculus:154 P.jiroveci:205

G1T8B7              	100.00%		L0P9D6              	100.00%
Bootstrap support for G1T8B7 as seed ortholog is 99%.
Bootstrap support for L0P9D6 as seed ortholog is 100%.

Group of orthologs #732. Best score 204 bits
Score difference with first non-orthologous sequence - O.cuniculus:102 P.jiroveci:204

G1SXN1              	100.00%		L0PAA3              	100.00%
G1T287              	48.59%		
G1SLI9              	25.04%		
Bootstrap support for G1SXN1 as seed ortholog is 99%.
Bootstrap support for L0PAA3 as seed ortholog is 100%.

Group of orthologs #733. Best score 203 bits
Score difference with first non-orthologous sequence - O.cuniculus:203 P.jiroveci:203

G1T472              	100.00%		L0PHT7              	100.00%
G1T2W5              	28.01%		
G1U4S9              	17.95%		
Bootstrap support for G1T472 as seed ortholog is 100%.
Bootstrap support for L0PHT7 as seed ortholog is 100%.

Group of orthologs #734. Best score 203 bits
Score difference with first non-orthologous sequence - O.cuniculus:97 P.jiroveci:151

P63148              	100.00%		L0P7B1              	100.00%
G1TC90              	89.19%		
G1T7C8              	59.46%		
Bootstrap support for P63148 as seed ortholog is 99%.
Bootstrap support for L0P7B1 as seed ortholog is 100%.

Group of orthologs #735. Best score 203 bits
Score difference with first non-orthologous sequence - O.cuniculus:79 P.jiroveci:203

G1THY5              	100.00%		L0PAA8              	100.00%
Bootstrap support for G1THY5 as seed ortholog is 99%.
Bootstrap support for L0PAA8 as seed ortholog is 100%.

Group of orthologs #736. Best score 202 bits
Score difference with first non-orthologous sequence - O.cuniculus:88 P.jiroveci:202

G1T8J2              	100.00%		L0PAF0              	100.00%
G1SR12              	29.96%		
Bootstrap support for G1T8J2 as seed ortholog is 98%.
Bootstrap support for L0PAF0 as seed ortholog is 100%.

Group of orthologs #737. Best score 202 bits
Score difference with first non-orthologous sequence - O.cuniculus:202 P.jiroveci:202

G1SPB2              	100.00%		L0PBD4              	100.00%
Bootstrap support for G1SPB2 as seed ortholog is 100%.
Bootstrap support for L0PBD4 as seed ortholog is 100%.

Group of orthologs #738. Best score 202 bits
Score difference with first non-orthologous sequence - O.cuniculus:202 P.jiroveci:202

G1T6N8              	100.00%		L0PAR5              	100.00%
Bootstrap support for G1T6N8 as seed ortholog is 100%.
Bootstrap support for L0PAR5 as seed ortholog is 100%.

Group of orthologs #739. Best score 201 bits
Score difference with first non-orthologous sequence - O.cuniculus:130 P.jiroveci:201

G1TJR3              	100.00%		L0PC18              	100.00%
G1TYL6              	100.00%		
G1U8P2              	89.84%		
G1TI85              	78.61%		
Bootstrap support for G1TJR3 as seed ortholog is 100%.
Bootstrap support for G1TYL6 as seed ortholog is 100%.
Bootstrap support for L0PC18 as seed ortholog is 100%.

Group of orthologs #740. Best score 201 bits
Score difference with first non-orthologous sequence - O.cuniculus:201 P.jiroveci:201

G1SM33              	100.00%		L0PCH6              	100.00%
Bootstrap support for G1SM33 as seed ortholog is 100%.
Bootstrap support for L0PCH6 as seed ortholog is 100%.

Group of orthologs #741. Best score 201 bits
Score difference with first non-orthologous sequence - O.cuniculus:201 P.jiroveci:201

G1SZK8              	100.00%		L0PD35              	100.00%
Bootstrap support for G1SZK8 as seed ortholog is 100%.
Bootstrap support for L0PD35 as seed ortholog is 100%.

Group of orthologs #742. Best score 200 bits
Score difference with first non-orthologous sequence - O.cuniculus:200 P.jiroveci:200

G1SX75              	100.00%		L0PB94              	100.00%
G1SIZ5              	39.51%		
G1T366              	34.77%		
Bootstrap support for G1SX75 as seed ortholog is 100%.
Bootstrap support for L0PB94 as seed ortholog is 100%.

Group of orthologs #743. Best score 200 bits
Score difference with first non-orthologous sequence - O.cuniculus:200 P.jiroveci:200

G1T6L0              	100.00%		L0PCH4              	100.00%
Bootstrap support for G1T6L0 as seed ortholog is 100%.
Bootstrap support for L0PCH4 as seed ortholog is 100%.

Group of orthologs #744. Best score 200 bits
Score difference with first non-orthologous sequence - O.cuniculus:200 P.jiroveci:200

G1TS51              	100.00%		L0P7L9              	100.00%
Bootstrap support for G1TS51 as seed ortholog is 100%.
Bootstrap support for L0P7L9 as seed ortholog is 100%.

Group of orthologs #745. Best score 199 bits
Score difference with first non-orthologous sequence - O.cuniculus:199 P.jiroveci:199

G1TRM4              	100.00%		L0P9I0              	100.00%
G1T455              	86.18%		
Bootstrap support for G1TRM4 as seed ortholog is 100%.
Bootstrap support for L0P9I0 as seed ortholog is 100%.

Group of orthologs #746. Best score 199 bits
Score difference with first non-orthologous sequence - O.cuniculus:108 P.jiroveci:199

G1T8Y9              	100.00%		L0PE03              	100.00%
Bootstrap support for G1T8Y9 as seed ortholog is 99%.
Bootstrap support for L0PE03 as seed ortholog is 100%.

Group of orthologs #747. Best score 198 bits
Score difference with first non-orthologous sequence - O.cuniculus:69 P.jiroveci:72

G1SLS1              	100.00%		L0PG51              	100.00%
G1TQ02              	93.25%		
Bootstrap support for G1SLS1 as seed ortholog is 95%.
Bootstrap support for L0PG51 as seed ortholog is 95%.

Group of orthologs #748. Best score 198 bits
Score difference with first non-orthologous sequence - O.cuniculus:198 P.jiroveci:198

G1U7A0              	100.00%		L0P804              	100.00%
G1T2U7              	70.43%		
Bootstrap support for G1U7A0 as seed ortholog is 100%.
Bootstrap support for L0P804 as seed ortholog is 100%.

Group of orthologs #749. Best score 197 bits
Score difference with first non-orthologous sequence - O.cuniculus:90 P.jiroveci:126

G1TC07              	100.00%		L0PA51              	100.00%
Bootstrap support for G1TC07 as seed ortholog is 99%.
Bootstrap support for L0PA51 as seed ortholog is 100%.

Group of orthologs #750. Best score 196 bits
Score difference with first non-orthologous sequence - O.cuniculus:196 P.jiroveci:196

G1SUU1              	100.00%		L0PG16              	100.00%
G1TG57              	5.56%		
G1T4C5              	5.49%		
Bootstrap support for G1SUU1 as seed ortholog is 100%.
Bootstrap support for L0PG16 as seed ortholog is 100%.

Group of orthologs #751. Best score 196 bits
Score difference with first non-orthologous sequence - O.cuniculus:37 P.jiroveci:196

G1U0N3              	100.00%		L0PC02              	100.00%
B7NZC5              	47.29%		
Bootstrap support for G1U0N3 as seed ortholog is 70%.
Alternative seed ortholog is G1TD16 (37 bits away from this cluster)
Bootstrap support for L0PC02 as seed ortholog is 100%.

Group of orthologs #752. Best score 196 bits
Score difference with first non-orthologous sequence - O.cuniculus:196 P.jiroveci:196

G1T796              	100.00%		L0PCK9              	100.00%
Bootstrap support for G1T796 as seed ortholog is 100%.
Bootstrap support for L0PCK9 as seed ortholog is 100%.

Group of orthologs #753. Best score 196 bits
Score difference with first non-orthologous sequence - O.cuniculus:196 P.jiroveci:196

G1T645              	100.00%		L0PGT2              	100.00%
Bootstrap support for G1T645 as seed ortholog is 100%.
Bootstrap support for L0PGT2 as seed ortholog is 100%.

Group of orthologs #754. Best score 195 bits
Score difference with first non-orthologous sequence - O.cuniculus:195 P.jiroveci:195

G1T1G5              	100.00%		L0P9Z4              	100.00%
G1SJD2              	48.87%		
Bootstrap support for G1T1G5 as seed ortholog is 100%.
Bootstrap support for L0P9Z4 as seed ortholog is 100%.

Group of orthologs #755. Best score 195 bits
Score difference with first non-orthologous sequence - O.cuniculus:195 P.jiroveci:195

G1SEC3              	100.00%		L0PG10              	100.00%
Bootstrap support for G1SEC3 as seed ortholog is 100%.
Bootstrap support for L0PG10 as seed ortholog is 100%.

Group of orthologs #756. Best score 195 bits
Score difference with first non-orthologous sequence - O.cuniculus:141 P.jiroveci:195

G1TEZ4              	100.00%		L0PAJ6              	100.00%
Bootstrap support for G1TEZ4 as seed ortholog is 100%.
Bootstrap support for L0PAJ6 as seed ortholog is 100%.

Group of orthologs #757. Best score 195 bits
Score difference with first non-orthologous sequence - O.cuniculus:195 P.jiroveci:195

G1TG27              	100.00%		L0PBE8              	100.00%
Bootstrap support for G1TG27 as seed ortholog is 100%.
Bootstrap support for L0PBE8 as seed ortholog is 100%.

Group of orthologs #758. Best score 195 bits
Score difference with first non-orthologous sequence - O.cuniculus:195 P.jiroveci:195

G1TMA2              	100.00%		L0PAM3              	100.00%
Bootstrap support for G1TMA2 as seed ortholog is 100%.
Bootstrap support for L0PAM3 as seed ortholog is 100%.

Group of orthologs #759. Best score 194 bits
Score difference with first non-orthologous sequence - O.cuniculus:68 P.jiroveci:95

G1SVP6              	100.00%		L0PAY4              	100.00%
G1U2Q4              	96.72%		
G1TE68              	96.72%		
G1TMN0              	95.08%		
G1TUJ8              	95.08%		
G1TH39              	93.44%		
G1SSZ2              	88.52%		
G1U2G1              	73.77%		
G1T0Z2              	68.85%		
G1U4A6              	57.38%		
Bootstrap support for G1SVP6 as seed ortholog is 99%.
Bootstrap support for L0PAY4 as seed ortholog is 100%.

Group of orthologs #760. Best score 194 bits
Score difference with first non-orthologous sequence - O.cuniculus:194 P.jiroveci:194

G1SJS8              	100.00%		L0PFC3              	100.00%
Bootstrap support for G1SJS8 as seed ortholog is 100%.
Bootstrap support for L0PFC3 as seed ortholog is 100%.

Group of orthologs #761. Best score 194 bits
Score difference with first non-orthologous sequence - O.cuniculus:194 P.jiroveci:194

G1U3M0              	100.00%		L0PC50              	100.00%
Bootstrap support for G1U3M0 as seed ortholog is 100%.
Bootstrap support for L0PC50 as seed ortholog is 100%.

Group of orthologs #762. Best score 193 bits
Score difference with first non-orthologous sequence - O.cuniculus:193 P.jiroveci:193

G1TGW1              	100.00%		L0PFV3              	100.00%
G1TLV8              	81.49%		
G1TAU3              	67.83%		
G1SPI8              	56.30%		
G1TNP7              	28.53%		
Bootstrap support for G1TGW1 as seed ortholog is 100%.
Bootstrap support for L0PFV3 as seed ortholog is 100%.

Group of orthologs #763. Best score 193 bits
Score difference with first non-orthologous sequence - O.cuniculus:193 P.jiroveci:193

G1SHJ8              	100.00%		L0PGJ6              	100.00%
G1TN74              	18.11%		
Bootstrap support for G1SHJ8 as seed ortholog is 100%.
Bootstrap support for L0PGJ6 as seed ortholog is 100%.

Group of orthologs #764. Best score 193 bits
Score difference with first non-orthologous sequence - O.cuniculus:137 P.jiroveci:193

G1SUS1              	100.00%		L0P919              	100.00%
Bootstrap support for G1SUS1 as seed ortholog is 100%.
Bootstrap support for L0P919 as seed ortholog is 100%.

Group of orthologs #765. Best score 193 bits
Score difference with first non-orthologous sequence - O.cuniculus:135 P.jiroveci:193

G1T3S4              	100.00%		L0PDS6              	100.00%
Bootstrap support for G1T3S4 as seed ortholog is 99%.
Bootstrap support for L0PDS6 as seed ortholog is 100%.

Group of orthologs #766. Best score 193 bits
Score difference with first non-orthologous sequence - O.cuniculus:193 P.jiroveci:193

G1TTU6              	100.00%		L0PE85              	100.00%
Bootstrap support for G1TTU6 as seed ortholog is 100%.
Bootstrap support for L0PE85 as seed ortholog is 100%.

Group of orthologs #767. Best score 192 bits
Score difference with first non-orthologous sequence - O.cuniculus:78 P.jiroveci:192

G1SHC5              	100.00%		L0P9Z5              	100.00%
G1TPV2              	85.81%		
Bootstrap support for G1SHC5 as seed ortholog is 95%.
Bootstrap support for L0P9Z5 as seed ortholog is 100%.

Group of orthologs #768. Best score 192 bits
Score difference with first non-orthologous sequence - O.cuniculus:62 P.jiroveci:192

G1SZR4              	100.00%		L0PFQ4              	100.00%
Bootstrap support for G1SZR4 as seed ortholog is 99%.
Bootstrap support for L0PFQ4 as seed ortholog is 100%.

Group of orthologs #769. Best score 192 bits
Score difference with first non-orthologous sequence - O.cuniculus:192 P.jiroveci:192

G1TBC4              	100.00%		L0PBM3              	100.00%
Bootstrap support for G1TBC4 as seed ortholog is 100%.
Bootstrap support for L0PBM3 as seed ortholog is 100%.

Group of orthologs #770. Best score 191 bits
Score difference with first non-orthologous sequence - O.cuniculus:62 P.jiroveci:135

G1T6C0              	100.00%		L0PCC3              	100.00%
G1T2T9              	66.02%		
G1T550              	61.78%		
Bootstrap support for G1T6C0 as seed ortholog is 98%.
Bootstrap support for L0PCC3 as seed ortholog is 100%.

Group of orthologs #771. Best score 191 bits
Score difference with first non-orthologous sequence - O.cuniculus:191 P.jiroveci:191

G1T2L1              	100.00%		L0PGX9              	100.00%
G1TQL6              	9.75%		
Bootstrap support for G1T2L1 as seed ortholog is 100%.
Bootstrap support for L0PGX9 as seed ortholog is 100%.

Group of orthologs #772. Best score 190 bits
Score difference with first non-orthologous sequence - O.cuniculus:190 P.jiroveci:190

G1T069              	100.00%		L0PBL8              	100.00%
                    	       		L0PDU3              	68.33%
Bootstrap support for G1T069 as seed ortholog is 100%.
Bootstrap support for L0PBL8 as seed ortholog is 100%.

Group of orthologs #773. Best score 189 bits
Score difference with first non-orthologous sequence - O.cuniculus:189 P.jiroveci:189

G1T424              	100.00%		L0PH33              	100.00%
G1TBF1              	65.76%		
G1T7I0              	22.82%		
G1T9A1              	21.75%		
G1SEP8              	21.68%		
G1SZX9              	21.61%		
Bootstrap support for G1T424 as seed ortholog is 100%.
Bootstrap support for L0PH33 as seed ortholog is 100%.

Group of orthologs #774. Best score 189 bits
Score difference with first non-orthologous sequence - O.cuniculus:189 P.jiroveci:189

G1SR22              	100.00%		L0PBL3              	100.00%
G1SV35              	30.24%		
G1SJL2              	24.71%		
Bootstrap support for G1SR22 as seed ortholog is 100%.
Bootstrap support for L0PBL3 as seed ortholog is 100%.

Group of orthologs #775. Best score 189 bits
Score difference with first non-orthologous sequence - O.cuniculus:189 P.jiroveci:189

G1TX84              	100.00%		L0PCV5              	100.00%
G1U6R4              	54.99%		
Bootstrap support for G1TX84 as seed ortholog is 100%.
Bootstrap support for L0PCV5 as seed ortholog is 100%.

Group of orthologs #776. Best score 189 bits
Score difference with first non-orthologous sequence - O.cuniculus:189 P.jiroveci:189

G1SCQ6              	100.00%		L0PE05              	100.00%
Bootstrap support for G1SCQ6 as seed ortholog is 100%.
Bootstrap support for L0PE05 as seed ortholog is 100%.

Group of orthologs #777. Best score 189 bits
Score difference with first non-orthologous sequence - O.cuniculus:189 P.jiroveci:189

G1SEJ6              	100.00%		L0PCH0              	100.00%
Bootstrap support for G1SEJ6 as seed ortholog is 100%.
Bootstrap support for L0PCH0 as seed ortholog is 100%.

Group of orthologs #778. Best score 187 bits
Score difference with first non-orthologous sequence - O.cuniculus:187 P.jiroveci:187

G1SM77              	100.00%		L0P8C9              	100.00%
Bootstrap support for G1SM77 as seed ortholog is 100%.
Bootstrap support for L0P8C9 as seed ortholog is 100%.

Group of orthologs #779. Best score 187 bits
Score difference with first non-orthologous sequence - O.cuniculus:110 P.jiroveci:187

G1SIX5              	100.00%		L0PEH9              	100.00%
Bootstrap support for G1SIX5 as seed ortholog is 99%.
Bootstrap support for L0PEH9 as seed ortholog is 100%.

Group of orthologs #780. Best score 187 bits
Score difference with first non-orthologous sequence - O.cuniculus:187 P.jiroveci:187

G1TTY7              	100.00%		L0PAC1              	100.00%
Bootstrap support for G1TTY7 as seed ortholog is 100%.
Bootstrap support for L0PAC1 as seed ortholog is 100%.

Group of orthologs #781. Best score 186 bits
Score difference with first non-orthologous sequence - O.cuniculus:50 P.jiroveci:132

G1SYC9              	100.00%		L0PIS9              	100.00%
G1SZ46              	41.85%		
G1SQP0              	37.00%		
G1TCS8              	18.50%		
G1TMK2              	6.61%		
G1SD30              	5.73%		
G1U0A5              	5.29%		
Bootstrap support for G1SYC9 as seed ortholog is 97%.
Bootstrap support for L0PIS9 as seed ortholog is 100%.

Group of orthologs #782. Best score 186 bits
Score difference with first non-orthologous sequence - O.cuniculus:186 P.jiroveci:186

G1T3F1              	100.00%		L0PFK7              	100.00%
G1T0V6              	42.82%		
G1T2E0              	39.85%		
Bootstrap support for G1T3F1 as seed ortholog is 100%.
Bootstrap support for L0PFK7 as seed ortholog is 100%.

Group of orthologs #783. Best score 186 bits
Score difference with first non-orthologous sequence - O.cuniculus:112 P.jiroveci:186

G1SNY5              	100.00%		L0PD33              	100.00%
G1T5E6              	48.87%		
Bootstrap support for G1SNY5 as seed ortholog is 99%.
Bootstrap support for L0PD33 as seed ortholog is 100%.

Group of orthologs #784. Best score 186 bits
Score difference with first non-orthologous sequence - O.cuniculus:94 P.jiroveci:186

G1U4C8              	100.00%		L0PDE4              	100.00%
G1SMK6              	62.93%		
Bootstrap support for G1U4C8 as seed ortholog is 99%.
Bootstrap support for L0PDE4 as seed ortholog is 100%.

Group of orthologs #785. Best score 186 bits
Score difference with first non-orthologous sequence - O.cuniculus:121 P.jiroveci:186

G1T9W6              	100.00%		L0P8X1              	100.00%
Bootstrap support for G1T9W6 as seed ortholog is 99%.
Bootstrap support for L0P8X1 as seed ortholog is 100%.

Group of orthologs #786. Best score 185 bits
Score difference with first non-orthologous sequence - O.cuniculus:185 P.jiroveci:185

G1TVP3              	100.00%		L0PC80              	100.00%
G1SIS5              	76.24%		
Bootstrap support for G1TVP3 as seed ortholog is 100%.
Bootstrap support for L0PC80 as seed ortholog is 100%.

Group of orthologs #787. Best score 185 bits
Score difference with first non-orthologous sequence - O.cuniculus:185 P.jiroveci:185

G1TB49              	100.00%		L0PE09              	100.00%
Bootstrap support for G1TB49 as seed ortholog is 100%.
Bootstrap support for L0PE09 as seed ortholog is 100%.

Group of orthologs #788. Best score 184 bits
Score difference with first non-orthologous sequence - O.cuniculus:63 P.jiroveci:184

G1SLH9              	100.00%		L0PAP9              	100.00%
G1U886              	39.81%		
G1T001              	25.59%		
Bootstrap support for G1SLH9 as seed ortholog is 99%.
Bootstrap support for L0PAP9 as seed ortholog is 100%.

Group of orthologs #789. Best score 184 bits
Score difference with first non-orthologous sequence - O.cuniculus:89 P.jiroveci:184

G1SDX2              	100.00%		L0PA07              	100.00%
Bootstrap support for G1SDX2 as seed ortholog is 99%.
Bootstrap support for L0PA07 as seed ortholog is 100%.

Group of orthologs #790. Best score 184 bits
Score difference with first non-orthologous sequence - O.cuniculus:184 P.jiroveci:184

G1TTI4              	100.00%		L0P6S2              	100.00%
Bootstrap support for G1TTI4 as seed ortholog is 100%.
Bootstrap support for L0P6S2 as seed ortholog is 100%.

Group of orthologs #791. Best score 183 bits
Score difference with first non-orthologous sequence - O.cuniculus:54 P.jiroveci:129

G1THL4              	100.00%		L0PAS2              	100.00%
G1T107              	85.16%		
G1TZG8              	74.22%		
G1U317              	67.19%		
Bootstrap support for G1THL4 as seed ortholog is 98%.
Bootstrap support for L0PAS2 as seed ortholog is 100%.

Group of orthologs #792. Best score 183 bits
Score difference with first non-orthologous sequence - O.cuniculus:183 P.jiroveci:183

G1SCY8              	100.00%		L0PG84              	100.00%
Bootstrap support for G1SCY8 as seed ortholog is 100%.
Bootstrap support for L0PG84 as seed ortholog is 100%.

Group of orthologs #793. Best score 183 bits
Score difference with first non-orthologous sequence - O.cuniculus:183 P.jiroveci:183

G1T0L9              	100.00%		L0PEK7              	100.00%
Bootstrap support for G1T0L9 as seed ortholog is 100%.
Bootstrap support for L0PEK7 as seed ortholog is 100%.

Group of orthologs #794. Best score 183 bits
Score difference with first non-orthologous sequence - O.cuniculus:183 P.jiroveci:183

G1TIZ9              	100.00%		L0P740              	100.00%
Bootstrap support for G1TIZ9 as seed ortholog is 100%.
Bootstrap support for L0P740 as seed ortholog is 100%.

Group of orthologs #795. Best score 183 bits
Score difference with first non-orthologous sequence - O.cuniculus:183 P.jiroveci:183

G1TUK8              	100.00%		L0PE89              	100.00%
Bootstrap support for G1TUK8 as seed ortholog is 100%.
Bootstrap support for L0PE89 as seed ortholog is 100%.

Group of orthologs #796. Best score 182 bits
Score difference with first non-orthologous sequence - O.cuniculus:182 P.jiroveci:182

G1SSZ7              	100.00%		L0PBB0              	100.00%
G1SY12              	7.61%		
Bootstrap support for G1SSZ7 as seed ortholog is 100%.
Bootstrap support for L0PBB0 as seed ortholog is 100%.

Group of orthologs #797. Best score 182 bits
Score difference with first non-orthologous sequence - O.cuniculus:182 P.jiroveci:182

G1TH69              	100.00%		L0P858              	100.00%
                    	       		L0PDX5              	70.14%
Bootstrap support for G1TH69 as seed ortholog is 100%.
Bootstrap support for L0P858 as seed ortholog is 100%.

Group of orthologs #798. Best score 182 bits
Score difference with first non-orthologous sequence - O.cuniculus:111 P.jiroveci:182

G1TA36              	100.00%		L0PFZ6              	100.00%
                    	       		L0P7L2              	96.05%
Bootstrap support for G1TA36 as seed ortholog is 99%.
Bootstrap support for L0PFZ6 as seed ortholog is 100%.

Group of orthologs #799. Best score 181 bits
Score difference with first non-orthologous sequence - O.cuniculus:181 P.jiroveci:181

G1SV10              	100.00%		L0PCE0              	100.00%
G1T9C3              	28.12%		
Bootstrap support for G1SV10 as seed ortholog is 100%.
Bootstrap support for L0PCE0 as seed ortholog is 100%.

Group of orthologs #800. Best score 181 bits
Score difference with first non-orthologous sequence - O.cuniculus:181 P.jiroveci:181

G1SG69              	100.00%		L0PB62              	100.00%
Bootstrap support for G1SG69 as seed ortholog is 100%.
Bootstrap support for L0PB62 as seed ortholog is 100%.

Group of orthologs #801. Best score 180 bits
Score difference with first non-orthologous sequence - O.cuniculus:100 P.jiroveci:180

G1TGT5              	100.00%		L0PD97              	100.00%
G1T8E7              	9.76%		
Bootstrap support for G1TGT5 as seed ortholog is 99%.
Bootstrap support for L0PD97 as seed ortholog is 100%.

Group of orthologs #802. Best score 180 bits
Score difference with first non-orthologous sequence - O.cuniculus:180 P.jiroveci:180

G1SLC2              	100.00%		L0PE97              	100.00%
Bootstrap support for G1SLC2 as seed ortholog is 100%.
Bootstrap support for L0PE97 as seed ortholog is 100%.

Group of orthologs #803. Best score 180 bits
Score difference with first non-orthologous sequence - O.cuniculus:180 P.jiroveci:180

G1ST95              	100.00%		L0PAR2              	100.00%
Bootstrap support for G1ST95 as seed ortholog is 100%.
Bootstrap support for L0PAR2 as seed ortholog is 100%.

Group of orthologs #804. Best score 180 bits
Score difference with first non-orthologous sequence - O.cuniculus:97 P.jiroveci:180

G1ST44              	100.00%		L0PB17              	100.00%
Bootstrap support for G1ST44 as seed ortholog is 99%.
Bootstrap support for L0PB17 as seed ortholog is 100%.

Group of orthologs #805. Best score 180 bits
Score difference with first non-orthologous sequence - O.cuniculus:22 P.jiroveci:20

G1T279              	100.00%		L0PB10              	100.00%
Bootstrap support for G1T279 as seed ortholog is 78%.
Bootstrap support for L0PB10 as seed ortholog is 73%.
Alternative seed ortholog is L0P835 (20 bits away from this cluster)

Group of orthologs #806. Best score 180 bits
Score difference with first non-orthologous sequence - O.cuniculus:180 P.jiroveci:180

G1T8T2              	100.00%		L0PB31              	100.00%
Bootstrap support for G1T8T2 as seed ortholog is 100%.
Bootstrap support for L0PB31 as seed ortholog is 100%.

Group of orthologs #807. Best score 180 bits
Score difference with first non-orthologous sequence - O.cuniculus:180 P.jiroveci:180

G1TBC6              	100.00%		L0PDW5              	100.00%
Bootstrap support for G1TBC6 as seed ortholog is 100%.
Bootstrap support for L0PDW5 as seed ortholog is 100%.

Group of orthologs #808. Best score 179 bits
Score difference with first non-orthologous sequence - O.cuniculus:179 P.jiroveci:179

G1SJ84              	100.00%		L0PCF8              	100.00%
G1SX30              	61.97%		
Bootstrap support for G1SJ84 as seed ortholog is 100%.
Bootstrap support for L0PCF8 as seed ortholog is 100%.

Group of orthologs #809. Best score 179 bits
Score difference with first non-orthologous sequence - O.cuniculus:179 P.jiroveci:179

G1U603              	100.00%		L0PG23              	100.00%
G1T966              	64.57%		
Bootstrap support for G1U603 as seed ortholog is 100%.
Bootstrap support for L0PG23 as seed ortholog is 100%.

Group of orthologs #810. Best score 178 bits
Score difference with first non-orthologous sequence - O.cuniculus:178 P.jiroveci:71

G1SIX1              	100.00%		L0PES6              	100.00%
G1U395              	18.08%		
Bootstrap support for G1SIX1 as seed ortholog is 100%.
Bootstrap support for L0PES6 as seed ortholog is 99%.

Group of orthologs #811. Best score 178 bits
Score difference with first non-orthologous sequence - O.cuniculus:178 P.jiroveci:178

G1T5Z3              	100.00%		L0PBJ0              	100.00%
G1T752              	100.00%		
Bootstrap support for G1T5Z3 as seed ortholog is 100%.
Bootstrap support for G1T752 as seed ortholog is 100%.
Bootstrap support for L0PBJ0 as seed ortholog is 100%.

Group of orthologs #812. Best score 178 bits
Score difference with first non-orthologous sequence - O.cuniculus:178 P.jiroveci:178

G1U8N3              	100.00%		L0PDL8              	100.00%
                    	       		L0PD52              	90.65%
Bootstrap support for G1U8N3 as seed ortholog is 100%.
Bootstrap support for L0PDL8 as seed ortholog is 100%.

Group of orthologs #813. Best score 178 bits
Score difference with first non-orthologous sequence - O.cuniculus:178 P.jiroveci:178

G1SF43              	100.00%		L0P8J4              	100.00%
Bootstrap support for G1SF43 as seed ortholog is 100%.
Bootstrap support for L0P8J4 as seed ortholog is 100%.

Group of orthologs #814. Best score 178 bits
Score difference with first non-orthologous sequence - O.cuniculus:178 P.jiroveci:178

G1SHW0              	100.00%		L0P896              	100.00%
Bootstrap support for G1SHW0 as seed ortholog is 100%.
Bootstrap support for L0P896 as seed ortholog is 100%.

Group of orthologs #815. Best score 178 bits
Score difference with first non-orthologous sequence - O.cuniculus:178 P.jiroveci:178

G1T780              	100.00%		L0P8D5              	100.00%
Bootstrap support for G1T780 as seed ortholog is 100%.
Bootstrap support for L0P8D5 as seed ortholog is 100%.

Group of orthologs #816. Best score 178 bits
Score difference with first non-orthologous sequence - O.cuniculus:6 P.jiroveci:178

G1TBX4              	100.00%		L0PFH2              	100.00%
Bootstrap support for G1TBX4 as seed ortholog is 62%.
Alternative seed ortholog is G1SDZ0 (6 bits away from this cluster)
Bootstrap support for L0PFH2 as seed ortholog is 100%.

Group of orthologs #817. Best score 178 bits
Score difference with first non-orthologous sequence - O.cuniculus:178 P.jiroveci:178

G1TJB0              	100.00%		L0PFD7              	100.00%
Bootstrap support for G1TJB0 as seed ortholog is 100%.
Bootstrap support for L0PFD7 as seed ortholog is 100%.

Group of orthologs #818. Best score 177 bits
Score difference with first non-orthologous sequence - O.cuniculus:177 P.jiroveci:177

G1SHF3              	100.00%		L0P746              	100.00%
Bootstrap support for G1SHF3 as seed ortholog is 100%.
Bootstrap support for L0P746 as seed ortholog is 100%.

Group of orthologs #819. Best score 177 bits
Score difference with first non-orthologous sequence - O.cuniculus:177 P.jiroveci:177

G1SR68              	100.00%		L0P9I2              	100.00%
Bootstrap support for G1SR68 as seed ortholog is 100%.
Bootstrap support for L0P9I2 as seed ortholog is 100%.

Group of orthologs #820. Best score 177 bits
Score difference with first non-orthologous sequence - O.cuniculus:177 P.jiroveci:177

G1SL20              	100.00%		L0PEG2              	100.00%
Bootstrap support for G1SL20 as seed ortholog is 100%.
Bootstrap support for L0PEG2 as seed ortholog is 100%.

Group of orthologs #821. Best score 177 bits
Score difference with first non-orthologous sequence - O.cuniculus:177 P.jiroveci:177

G1TEG8              	100.00%		L0PGR5              	100.00%
Bootstrap support for G1TEG8 as seed ortholog is 100%.
Bootstrap support for L0PGR5 as seed ortholog is 100%.

Group of orthologs #822. Best score 177 bits
Score difference with first non-orthologous sequence - O.cuniculus:177 P.jiroveci:177

G1TPF3              	100.00%		L0PEA1              	100.00%
Bootstrap support for G1TPF3 as seed ortholog is 100%.
Bootstrap support for L0PEA1 as seed ortholog is 100%.

Group of orthologs #823. Best score 176 bits
Score difference with first non-orthologous sequence - O.cuniculus:176 P.jiroveci:176

G1SNN6              	100.00%		L0PEB9              	100.00%
                    	       		L0PA79              	57.98%
Bootstrap support for G1SNN6 as seed ortholog is 100%.
Bootstrap support for L0PEB9 as seed ortholog is 100%.

Group of orthologs #824. Best score 176 bits
Score difference with first non-orthologous sequence - O.cuniculus:49 P.jiroveci:176

G1SMR6              	100.00%		L0PBL9              	100.00%
Bootstrap support for G1SMR6 as seed ortholog is 84%.
Bootstrap support for L0PBL9 as seed ortholog is 100%.

Group of orthologs #825. Best score 176 bits
Score difference with first non-orthologous sequence - O.cuniculus:176 P.jiroveci:176

G1U8K3              	100.00%		L0PC06              	100.00%
Bootstrap support for G1U8K3 as seed ortholog is 100%.
Bootstrap support for L0PC06 as seed ortholog is 100%.

Group of orthologs #826. Best score 175 bits
Score difference with first non-orthologous sequence - O.cuniculus:84 P.jiroveci:175

G1SNY0              	100.00%		L0PB81              	100.00%
G1TWD4              	97.10%		
Bootstrap support for G1SNY0 as seed ortholog is 99%.
Bootstrap support for L0PB81 as seed ortholog is 100%.

Group of orthologs #827. Best score 175 bits
Score difference with first non-orthologous sequence - O.cuniculus:175 P.jiroveci:175

G1TCV1              	100.00%		L0PA28              	100.00%
G1T819              	35.09%		
Bootstrap support for G1TCV1 as seed ortholog is 100%.
Bootstrap support for L0PA28 as seed ortholog is 100%.

Group of orthologs #828. Best score 175 bits
Score difference with first non-orthologous sequence - O.cuniculus:42 P.jiroveci:86

G1T1T9              	100.00%		L0PBS7              	100.00%
Bootstrap support for G1T1T9 as seed ortholog is 84%.
Bootstrap support for L0PBS7 as seed ortholog is 98%.

Group of orthologs #829. Best score 175 bits
Score difference with first non-orthologous sequence - O.cuniculus:175 P.jiroveci:175

G1T0F3              	100.00%		L0PDJ4              	100.00%
Bootstrap support for G1T0F3 as seed ortholog is 100%.
Bootstrap support for L0PDJ4 as seed ortholog is 100%.

Group of orthologs #830. Best score 175 bits
Score difference with first non-orthologous sequence - O.cuniculus:49 P.jiroveci:175

G1TBL1              	100.00%		L0PC81              	100.00%
Bootstrap support for G1TBL1 as seed ortholog is 90%.
Bootstrap support for L0PC81 as seed ortholog is 100%.

Group of orthologs #831. Best score 174 bits
Score difference with first non-orthologous sequence - O.cuniculus:174 P.jiroveci:174

G1SCI1              	100.00%		L0PGW6              	100.00%
G1U8U4              	83.25%		
G1TY75              	25.91%		
Bootstrap support for G1SCI1 as seed ortholog is 100%.
Bootstrap support for L0PGW6 as seed ortholog is 100%.

Group of orthologs #832. Best score 174 bits
Score difference with first non-orthologous sequence - O.cuniculus:132 P.jiroveci:174

G1U0B5              	100.00%		L0P701              	100.00%
G1TZ50              	66.67%		
Bootstrap support for G1U0B5 as seed ortholog is 99%.
Bootstrap support for L0P701 as seed ortholog is 100%.

Group of orthologs #833. Best score 174 bits
Score difference with first non-orthologous sequence - O.cuniculus:174 P.jiroveci:174

G1SGX4              	100.00%		L0PGZ5              	100.00%
Bootstrap support for G1SGX4 as seed ortholog is 100%.
Bootstrap support for L0PGZ5 as seed ortholog is 100%.

Group of orthologs #834. Best score 174 bits
Score difference with first non-orthologous sequence - O.cuniculus:102 P.jiroveci:174

G1SZG3              	100.00%		L0PBU8              	100.00%
Bootstrap support for G1SZG3 as seed ortholog is 99%.
Bootstrap support for L0PBU8 as seed ortholog is 100%.

Group of orthologs #835. Best score 174 bits
Score difference with first non-orthologous sequence - O.cuniculus:16 P.jiroveci:174

G1SWQ8              	100.00%		L0PFZ5              	100.00%
Bootstrap support for G1SWQ8 as seed ortholog is 67%.
Alternative seed ortholog is G1SGS6 (16 bits away from this cluster)
Bootstrap support for L0PFZ5 as seed ortholog is 100%.

Group of orthologs #836. Best score 173 bits
Score difference with first non-orthologous sequence - O.cuniculus:173 P.jiroveci:173

G1U2R9              	100.00%		L0PHR2              	100.00%
Bootstrap support for G1U2R9 as seed ortholog is 100%.
Bootstrap support for L0PHR2 as seed ortholog is 100%.

Group of orthologs #837. Best score 172 bits
Score difference with first non-orthologous sequence - O.cuniculus:172 P.jiroveci:172

G1TPV0              	100.00%		L0PC96              	100.00%
G1TKB3              	98.24%		
G1ST96              	92.95%		
Bootstrap support for G1TPV0 as seed ortholog is 100%.
Bootstrap support for L0PC96 as seed ortholog is 100%.

Group of orthologs #838. Best score 172 bits
Score difference with first non-orthologous sequence - O.cuniculus:16 P.jiroveci:172

G1SZA1              	100.00%		L0PAV2              	100.00%
G1TTZ3              	57.94%		
Bootstrap support for G1SZA1 as seed ortholog is 74%.
Alternative seed ortholog is G1SML3 (16 bits away from this cluster)
Bootstrap support for L0PAV2 as seed ortholog is 100%.

Group of orthologs #839. Best score 172 bits
Score difference with first non-orthologous sequence - O.cuniculus:113 P.jiroveci:172

G1SRL2              	100.00%		L0PC70              	100.00%
Bootstrap support for G1SRL2 as seed ortholog is 100%.
Bootstrap support for L0PC70 as seed ortholog is 100%.

Group of orthologs #840. Best score 172 bits
Score difference with first non-orthologous sequence - O.cuniculus:128 P.jiroveci:172

G1SVP9              	100.00%		L0PFW7              	100.00%
Bootstrap support for G1SVP9 as seed ortholog is 100%.
Bootstrap support for L0PFW7 as seed ortholog is 100%.

Group of orthologs #841. Best score 171 bits
Score difference with first non-orthologous sequence - O.cuniculus:171 P.jiroveci:171

G1TGY5              	100.00%		L0PBL1              	100.00%
G1T8R6              	87.04%		
G1T832              	45.34%		
G1TYV1              	17.41%		
G1TIR5              	10.53%		
Bootstrap support for G1TGY5 as seed ortholog is 100%.
Bootstrap support for L0PBL1 as seed ortholog is 100%.

Group of orthologs #842. Best score 171 bits
Score difference with first non-orthologous sequence - O.cuniculus:58 P.jiroveci:171

G1SSC7              	100.00%		L0PEN4              	100.00%
G1TTE2              	8.49%		
Bootstrap support for G1SSC7 as seed ortholog is 90%.
Bootstrap support for L0PEN4 as seed ortholog is 100%.

Group of orthologs #843. Best score 171 bits
Score difference with first non-orthologous sequence - O.cuniculus:99 P.jiroveci:92

G1SXR8              	100.00%		L0PAQ4              	100.00%
G1TEA4              	5.10%		
Bootstrap support for G1SXR8 as seed ortholog is 99%.
Bootstrap support for L0PAQ4 as seed ortholog is 99%.

Group of orthologs #844. Best score 171 bits
Score difference with first non-orthologous sequence - O.cuniculus:171 P.jiroveci:126

G1TH06              	100.00%		L0PE37              	100.00%
Bootstrap support for G1TH06 as seed ortholog is 100%.
Bootstrap support for L0PE37 as seed ortholog is 100%.

Group of orthologs #845. Best score 171 bits
Score difference with first non-orthologous sequence - O.cuniculus:26 P.jiroveci:171

G1TZU8              	100.00%		L0PCI0              	100.00%
Bootstrap support for G1TZU8 as seed ortholog is 83%.
Bootstrap support for L0PCI0 as seed ortholog is 100%.

Group of orthologs #846. Best score 171 bits
Score difference with first non-orthologous sequence - O.cuniculus:171 P.jiroveci:171

G1U8E8              	100.00%		L0PFL0              	100.00%
Bootstrap support for G1U8E8 as seed ortholog is 100%.
Bootstrap support for L0PFL0 as seed ortholog is 100%.

Group of orthologs #847. Best score 170 bits
Score difference with first non-orthologous sequence - O.cuniculus:31 P.jiroveci:170

G1TS90              	100.00%		L0PH23              	100.00%
G1TIH9              	31.41%		
G1SQM9              	6.95%		
Bootstrap support for G1TS90 as seed ortholog is 85%.
Bootstrap support for L0PH23 as seed ortholog is 100%.

Group of orthologs #848. Best score 170 bits
Score difference with first non-orthologous sequence - O.cuniculus:19 P.jiroveci:69

G1U1V8              	100.00%		L0PGM0              	100.00%
G1TJN2              	59.80%		
G1SCP2              	29.15%		
Bootstrap support for G1U1V8 as seed ortholog is 78%.
Bootstrap support for L0PGM0 as seed ortholog is 99%.

Group of orthologs #849. Best score 170 bits
Score difference with first non-orthologous sequence - O.cuniculus:170 P.jiroveci:170

G1SIZ2              	100.00%		L0P9N4              	100.00%
Bootstrap support for G1SIZ2 as seed ortholog is 100%.
Bootstrap support for L0P9N4 as seed ortholog is 100%.

Group of orthologs #850. Best score 170 bits
Score difference with first non-orthologous sequence - O.cuniculus:170 P.jiroveci:170

G1SLJ9              	100.00%		L0PA27              	100.00%
Bootstrap support for G1SLJ9 as seed ortholog is 100%.
Bootstrap support for L0PA27 as seed ortholog is 100%.

Group of orthologs #851. Best score 170 bits
Score difference with first non-orthologous sequence - O.cuniculus:170 P.jiroveci:100

G1U4V1              	100.00%		L0P9T6              	100.00%
Bootstrap support for G1U4V1 as seed ortholog is 100%.
Bootstrap support for L0P9T6 as seed ortholog is 99%.

Group of orthologs #852. Best score 169 bits
Score difference with first non-orthologous sequence - O.cuniculus:169 P.jiroveci:169

Q09YN4              	100.00%		L0PFG0              	100.00%
G1SCY4              	78.80%		
G1U7B8              	18.07%		
G1T7V9              	8.67%		
Bootstrap support for Q09YN4 as seed ortholog is 100%.
Bootstrap support for L0PFG0 as seed ortholog is 100%.

Group of orthologs #853. Best score 169 bits
Score difference with first non-orthologous sequence - O.cuniculus:128 P.jiroveci:169

G1TAE4              	100.00%		L0PD40              	100.00%
Bootstrap support for G1TAE4 as seed ortholog is 99%.
Bootstrap support for L0PD40 as seed ortholog is 100%.

Group of orthologs #854. Best score 169 bits
Score difference with first non-orthologous sequence - O.cuniculus:29 P.jiroveci:94

G1TQP6              	100.00%		L0PGT3              	100.00%
Bootstrap support for G1TQP6 as seed ortholog is 88%.
Bootstrap support for L0PGT3 as seed ortholog is 99%.

Group of orthologs #855. Best score 168 bits
Score difference with first non-orthologous sequence - O.cuniculus:168 P.jiroveci:168

G1SEH3              	100.00%		L0PA35              	100.00%
Bootstrap support for G1SEH3 as seed ortholog is 100%.
Bootstrap support for L0PA35 as seed ortholog is 100%.

Group of orthologs #856. Best score 168 bits
Score difference with first non-orthologous sequence - O.cuniculus:168 P.jiroveci:168

G1SFT2              	100.00%		L0PE43              	100.00%
Bootstrap support for G1SFT2 as seed ortholog is 100%.
Bootstrap support for L0PE43 as seed ortholog is 100%.

Group of orthologs #857. Best score 168 bits
Score difference with first non-orthologous sequence - O.cuniculus:168 P.jiroveci:168

G1TB18              	100.00%		L0PEA9              	100.00%
Bootstrap support for G1TB18 as seed ortholog is 100%.
Bootstrap support for L0PEA9 as seed ortholog is 100%.

Group of orthologs #858. Best score 168 bits
Score difference with first non-orthologous sequence - O.cuniculus:168 P.jiroveci:168

G1TGA8              	100.00%		L0PAG4              	100.00%
Bootstrap support for G1TGA8 as seed ortholog is 100%.
Bootstrap support for L0PAG4 as seed ortholog is 100%.

Group of orthologs #859. Best score 168 bits
Score difference with first non-orthologous sequence - O.cuniculus:168 P.jiroveci:168

G1T9X1              	100.00%		L0PG81              	100.00%
Bootstrap support for G1T9X1 as seed ortholog is 100%.
Bootstrap support for L0PG81 as seed ortholog is 100%.

Group of orthologs #860. Best score 168 bits
Score difference with first non-orthologous sequence - O.cuniculus:168 P.jiroveci:168

G1TE50              	100.00%		L0PG54              	100.00%
Bootstrap support for G1TE50 as seed ortholog is 100%.
Bootstrap support for L0PG54 as seed ortholog is 100%.

Group of orthologs #861. Best score 167 bits
Score difference with first non-orthologous sequence - O.cuniculus:167 P.jiroveci:167

G1TEM6              	100.00%		L0P9G6              	100.00%
Bootstrap support for G1TEM6 as seed ortholog is 100%.
Bootstrap support for L0P9G6 as seed ortholog is 100%.

Group of orthologs #862. Best score 167 bits
Score difference with first non-orthologous sequence - O.cuniculus:167 P.jiroveci:167

G1TI40              	100.00%		L0P9W6              	100.00%
Bootstrap support for G1TI40 as seed ortholog is 100%.
Bootstrap support for L0P9W6 as seed ortholog is 100%.

Group of orthologs #863. Best score 166 bits
Score difference with first non-orthologous sequence - O.cuniculus:109 P.jiroveci:166

G1U286              	100.00%		L0PC66              	100.00%
G1TR00              	37.95%		L0PBN8              	74.23%
Bootstrap support for G1U286 as seed ortholog is 100%.
Bootstrap support for L0PC66 as seed ortholog is 100%.

Group of orthologs #864. Best score 166 bits
Score difference with first non-orthologous sequence - O.cuniculus:166 P.jiroveci:166

G1SNK1              	100.00%		L0PDA4              	100.00%
Bootstrap support for G1SNK1 as seed ortholog is 100%.
Bootstrap support for L0PDA4 as seed ortholog is 100%.

Group of orthologs #865. Best score 166 bits
Score difference with first non-orthologous sequence - O.cuniculus:166 P.jiroveci:166

G1SN42              	100.00%		L0PGK0              	100.00%
Bootstrap support for G1SN42 as seed ortholog is 100%.
Bootstrap support for L0PGK0 as seed ortholog is 100%.

Group of orthologs #866. Best score 166 bits
Score difference with first non-orthologous sequence - O.cuniculus:166 P.jiroveci:166

G1U2B5              	100.00%		L0PA48              	100.00%
Bootstrap support for G1U2B5 as seed ortholog is 100%.
Bootstrap support for L0PA48 as seed ortholog is 100%.

Group of orthologs #867. Best score 165 bits
Score difference with first non-orthologous sequence - O.cuniculus:165 P.jiroveci:165

G1SH42              	100.00%		L0PFX0              	100.00%
G1SUY0              	64.32%		
Bootstrap support for G1SH42 as seed ortholog is 100%.
Bootstrap support for L0PFX0 as seed ortholog is 100%.

Group of orthologs #868. Best score 165 bits
Score difference with first non-orthologous sequence - O.cuniculus:78 P.jiroveci:165

G1T4W2              	100.00%		L0PDJ7              	100.00%
G1TCJ6              	20.10%		
Bootstrap support for G1T4W2 as seed ortholog is 99%.
Bootstrap support for L0PDJ7 as seed ortholog is 100%.

Group of orthologs #869. Best score 165 bits
Score difference with first non-orthologous sequence - O.cuniculus:51 P.jiroveci:122

G1SRB5              	100.00%		L0PDG6              	100.00%
Bootstrap support for G1SRB5 as seed ortholog is 91%.
Bootstrap support for L0PDG6 as seed ortholog is 99%.

Group of orthologs #870. Best score 165 bits
Score difference with first non-orthologous sequence - O.cuniculus:165 P.jiroveci:165

G1T302              	100.00%		L0PCP5              	100.00%
Bootstrap support for G1T302 as seed ortholog is 100%.
Bootstrap support for L0PCP5 as seed ortholog is 100%.

Group of orthologs #871. Best score 165 bits
Score difference with first non-orthologous sequence - O.cuniculus:165 P.jiroveci:165

G1T9I6              	100.00%		L0PDP9              	100.00%
Bootstrap support for G1T9I6 as seed ortholog is 100%.
Bootstrap support for L0PDP9 as seed ortholog is 100%.

Group of orthologs #872. Best score 165 bits
Score difference with first non-orthologous sequence - O.cuniculus:165 P.jiroveci:165

G1U8T6              	100.00%		L0P8V3              	100.00%
Bootstrap support for G1U8T6 as seed ortholog is 100%.
Bootstrap support for L0P8V3 as seed ortholog is 100%.

Group of orthologs #873. Best score 164 bits
Score difference with first non-orthologous sequence - O.cuniculus:164 P.jiroveci:64

G1U968              	100.00%		L0PB21              	100.00%
G1U7I9              	51.59%		
Bootstrap support for G1U968 as seed ortholog is 100%.
Bootstrap support for L0PB21 as seed ortholog is 94%.

Group of orthologs #874. Best score 164 bits
Score difference with first non-orthologous sequence - O.cuniculus:164 P.jiroveci:164

G1SGB7              	100.00%		L0PA78              	100.00%
Bootstrap support for G1SGB7 as seed ortholog is 100%.
Bootstrap support for L0PA78 as seed ortholog is 100%.

Group of orthologs #875. Best score 164 bits
Score difference with first non-orthologous sequence - O.cuniculus:164 P.jiroveci:164

G1SGX1              	100.00%		L0PFL1              	100.00%
Bootstrap support for G1SGX1 as seed ortholog is 100%.
Bootstrap support for L0PFL1 as seed ortholog is 100%.

Group of orthologs #876. Best score 164 bits
Score difference with first non-orthologous sequence - O.cuniculus:164 P.jiroveci:164

G1T3W6              	100.00%		L0PEX0              	100.00%
Bootstrap support for G1T3W6 as seed ortholog is 100%.
Bootstrap support for L0PEX0 as seed ortholog is 100%.

Group of orthologs #877. Best score 163 bits
Score difference with first non-orthologous sequence - O.cuniculus:83 P.jiroveci:163

G1SE76              	100.00%		L0PE13              	100.00%
G1TF04              	100.00%		
G1TRP8              	98.63%		
G1TPH6              	93.84%		
G1U8T8              	93.84%		
G1TIJ9              	93.15%		
G1TY70              	93.15%		
G1TJX9              	91.78%		
G1U916              	91.78%		
G1U5S9              	91.10%		
G1U7T5              	91.10%		
G1U0E7              	90.41%		
G1TJX1              	89.73%		
G1TUP9              	89.73%		
G1T638              	87.67%		
G1TGC3              	87.67%		
G1TJT7              	86.99%		
G1TEW2              	86.99%		
G1TNC3              	86.99%		
G1U712              	86.30%		
G1TX54              	86.30%		
G1TPQ9              	85.62%		
G1TQE0              	84.93%		
G1TM80              	82.88%		
G1U1A7              	81.51%		
G1TIW2              	80.82%		
G1TYW9              	79.45%		
G1TMI7              	78.77%		
G1U6E2              	78.08%		
G1U7W6              	76.71%		
G1TNX0              	76.03%		
G1U3C0              	70.55%		
G1U8C3              	54.79%		
G1TR77              	48.63%		
G1U080              	31.51%		
G1TNU6              	26.03%		
G1TUL0              	22.60%		
G1U3U3              	15.07%		
G1TR40              	13.01%		
G1TKB8              	7.53%		
Bootstrap support for G1SE76 as seed ortholog is 99%.
Bootstrap support for G1TF04 as seed ortholog is 99%.
Bootstrap support for L0PE13 as seed ortholog is 100%.

Group of orthologs #878. Best score 163 bits
Score difference with first non-orthologous sequence - O.cuniculus:163 P.jiroveci:163

G1SHN4              	100.00%		L0P8D9              	100.00%
Bootstrap support for G1SHN4 as seed ortholog is 100%.
Bootstrap support for L0P8D9 as seed ortholog is 100%.

Group of orthologs #879. Best score 163 bits
Score difference with first non-orthologous sequence - O.cuniculus:163 P.jiroveci:163

G1SV82              	100.00%		L0PD11              	100.00%
Bootstrap support for G1SV82 as seed ortholog is 100%.
Bootstrap support for L0PD11 as seed ortholog is 100%.

Group of orthologs #880. Best score 163 bits
Score difference with first non-orthologous sequence - O.cuniculus:163 P.jiroveci:163

G1T277              	100.00%		L0P8P5              	100.00%
Bootstrap support for G1T277 as seed ortholog is 100%.
Bootstrap support for L0P8P5 as seed ortholog is 100%.

Group of orthologs #881. Best score 163 bits
Score difference with first non-orthologous sequence - O.cuniculus:163 P.jiroveci:163

G1U4T6              	100.00%		L0PFH7              	100.00%
Bootstrap support for G1U4T6 as seed ortholog is 100%.
Bootstrap support for L0PFH7 as seed ortholog is 100%.

Group of orthologs #882. Best score 162 bits
Score difference with first non-orthologous sequence - O.cuniculus:54 P.jiroveci:108

G1T2M0              	100.00%		L0PE79              	100.00%
G1TRA4              	50.61%		
G1U1B2              	24.09%		
G1SMG8              	10.98%		
G1SPC9              	10.37%		
G1TBX7              	7.32%		
G1SPY7              	6.71%		
G1TZW4              	6.40%		
G1SZ19              	6.40%		
G1SQ32              	5.79%		
E2J6M8              	5.49%		
G1SQW1              	5.49%		
Bootstrap support for G1T2M0 as seed ortholog is 96%.
Bootstrap support for L0PE79 as seed ortholog is 99%.

Group of orthologs #883. Best score 162 bits
Score difference with first non-orthologous sequence - O.cuniculus:162 P.jiroveci:162

G1U949              	100.00%		L0P8S1              	100.00%
G1T892              	49.08%		
G1SKE0              	38.26%		
Bootstrap support for G1U949 as seed ortholog is 100%.
Bootstrap support for L0P8S1 as seed ortholog is 100%.

Group of orthologs #884. Best score 162 bits
Score difference with first non-orthologous sequence - O.cuniculus:162 P.jiroveci:162

G1SLF5              	100.00%		L0P9G8              	100.00%
                    	       		L0PDI0              	50.55%
Bootstrap support for G1SLF5 as seed ortholog is 100%.
Bootstrap support for L0P9G8 as seed ortholog is 100%.

Group of orthologs #885. Best score 162 bits
Score difference with first non-orthologous sequence - O.cuniculus:162 P.jiroveci:162

G1SS33              	100.00%		L0PCG3              	100.00%
G1TIW5              	57.66%		
Bootstrap support for G1SS33 as seed ortholog is 100%.
Bootstrap support for L0PCG3 as seed ortholog is 100%.

Group of orthologs #886. Best score 162 bits
Score difference with first non-orthologous sequence - O.cuniculus:162 P.jiroveci:162

G1SEP9              	100.00%		L0PAB2              	100.00%
Bootstrap support for G1SEP9 as seed ortholog is 100%.
Bootstrap support for L0PAB2 as seed ortholog is 100%.

Group of orthologs #887. Best score 161 bits
Score difference with first non-orthologous sequence - O.cuniculus:161 P.jiroveci:161

G1SHV3              	100.00%		L0P7D0              	100.00%
G1TPY0              	23.41%		
Bootstrap support for G1SHV3 as seed ortholog is 100%.
Bootstrap support for L0P7D0 as seed ortholog is 100%.

Group of orthologs #888. Best score 161 bits
Score difference with first non-orthologous sequence - O.cuniculus:161 P.jiroveci:161

G1SPW6              	100.00%		L0PAB8              	100.00%
Bootstrap support for G1SPW6 as seed ortholog is 100%.
Bootstrap support for L0PAB8 as seed ortholog is 100%.

Group of orthologs #889. Best score 161 bits
Score difference with first non-orthologous sequence - O.cuniculus:161 P.jiroveci:161

G1SXB1              	100.00%		L0P7Z9              	100.00%
Bootstrap support for G1SXB1 as seed ortholog is 100%.
Bootstrap support for L0P7Z9 as seed ortholog is 100%.

Group of orthologs #890. Best score 160 bits
Score difference with first non-orthologous sequence - O.cuniculus:160 P.jiroveci:160

G1SUP8              	100.00%		L0PFY9              	100.00%
G1SWR7              	100.00%		
Bootstrap support for G1SUP8 as seed ortholog is 100%.
Bootstrap support for G1SWR7 as seed ortholog is 100%.
Bootstrap support for L0PFY9 as seed ortholog is 100%.

Group of orthologs #891. Best score 160 bits
Score difference with first non-orthologous sequence - O.cuniculus:95 P.jiroveci:160

G1T6D1              	100.00%		L0PCA8              	100.00%
G1TPF6              	92.50%		
Bootstrap support for G1T6D1 as seed ortholog is 99%.
Bootstrap support for L0PCA8 as seed ortholog is 100%.

Group of orthologs #892. Best score 160 bits
Score difference with first non-orthologous sequence - O.cuniculus:90 P.jiroveci:95

G1TVG2              	100.00%		L0PFK9              	100.00%
G1TWQ3              	100.00%		
Bootstrap support for G1TVG2 as seed ortholog is 98%.
Bootstrap support for G1TWQ3 as seed ortholog is 98%.
Bootstrap support for L0PFK9 as seed ortholog is 98%.

Group of orthologs #893. Best score 160 bits
Score difference with first non-orthologous sequence - O.cuniculus:40 P.jiroveci:160

P36836              	100.00%		L0PE53              	100.00%
P46029              	37.70%		
Bootstrap support for P36836 as seed ortholog is 85%.
Bootstrap support for L0PE53 as seed ortholog is 100%.

Group of orthologs #894. Best score 160 bits
Score difference with first non-orthologous sequence - O.cuniculus:160 P.jiroveci:160

G1SV81              	100.00%		L0PCK2              	100.00%
Bootstrap support for G1SV81 as seed ortholog is 100%.
Bootstrap support for L0PCK2 as seed ortholog is 100%.

Group of orthologs #895. Best score 160 bits
Score difference with first non-orthologous sequence - O.cuniculus:113 P.jiroveci:160

G1T724              	100.00%		L0PCP9              	100.00%
Bootstrap support for G1T724 as seed ortholog is 99%.
Bootstrap support for L0PCP9 as seed ortholog is 100%.

Group of orthologs #896. Best score 159 bits
Score difference with first non-orthologous sequence - O.cuniculus:159 P.jiroveci:159

G1SPS8              	100.00%		L0PD01              	100.00%
                    	       		L0PF42              	100.00%
Bootstrap support for G1SPS8 as seed ortholog is 100%.
Bootstrap support for L0PD01 as seed ortholog is 100%.
Bootstrap support for L0PF42 as seed ortholog is 100%.

Group of orthologs #897. Best score 159 bits
Score difference with first non-orthologous sequence - O.cuniculus:159 P.jiroveci:159

G1TA43              	100.00%		L0P852              	100.00%
Bootstrap support for G1TA43 as seed ortholog is 100%.
Bootstrap support for L0P852 as seed ortholog is 100%.

Group of orthologs #898. Best score 159 bits
Score difference with first non-orthologous sequence - O.cuniculus:159 P.jiroveci:159

G1TE30              	100.00%		L0PCP0              	100.00%
Bootstrap support for G1TE30 as seed ortholog is 100%.
Bootstrap support for L0PCP0 as seed ortholog is 100%.

Group of orthologs #899. Best score 159 bits
Score difference with first non-orthologous sequence - O.cuniculus:159 P.jiroveci:159

G1TIX5              	100.00%		L0PEN8              	100.00%
Bootstrap support for G1TIX5 as seed ortholog is 100%.
Bootstrap support for L0PEN8 as seed ortholog is 100%.

Group of orthologs #900. Best score 158 bits
Score difference with first non-orthologous sequence - O.cuniculus:62 P.jiroveci:158

G1SSZ8              	100.00%		L0PBR7              	100.00%
G1T7F1              	100.00%		
G1T8N1              	100.00%		
G1SJS1              	97.75%		
G1TP83              	97.75%		
G1U155              	96.63%		
G1TJC1              	94.38%		
G1SQE8              	93.26%		
G1TQC6              	26.97%		
Bootstrap support for G1SSZ8 as seed ortholog is 100%.
Bootstrap support for G1T7F1 as seed ortholog is 99%.
Bootstrap support for G1T8N1 as seed ortholog is 99%.
Bootstrap support for L0PBR7 as seed ortholog is 100%.

Group of orthologs #901. Best score 158 bits
Score difference with first non-orthologous sequence - O.cuniculus:158 P.jiroveci:158

P43348              	100.00%		L0P9X0              	100.00%
G1TGL8              	33.68%		
G1TW53              	30.05%		
G1TLZ0              	25.39%		
Bootstrap support for P43348 as seed ortholog is 100%.
Bootstrap support for L0P9X0 as seed ortholog is 100%.

Group of orthologs #902. Best score 158 bits
Score difference with first non-orthologous sequence - O.cuniculus:57 P.jiroveci:85

G1SPH5              	100.00%		L0PEX6              	100.00%
G1SU11              	14.12%		
G1SWQ3              	12.99%		
Bootstrap support for G1SPH5 as seed ortholog is 96%.
Bootstrap support for L0PEX6 as seed ortholog is 99%.

Group of orthologs #903. Best score 158 bits
Score difference with first non-orthologous sequence - O.cuniculus:158 P.jiroveci:158

G1SFE6              	100.00%		L0PFW9              	100.00%
G1TKL0              	28.33%		
Bootstrap support for G1SFE6 as seed ortholog is 100%.
Bootstrap support for L0PFW9 as seed ortholog is 100%.

Group of orthologs #904. Best score 158 bits
Score difference with first non-orthologous sequence - O.cuniculus:158 P.jiroveci:158

G1SQ07              	100.00%		L0PE02              	100.00%
Bootstrap support for G1SQ07 as seed ortholog is 100%.
Bootstrap support for L0PE02 as seed ortholog is 100%.

Group of orthologs #905. Best score 158 bits
Score difference with first non-orthologous sequence - O.cuniculus:76 P.jiroveci:116

G1T4I4              	100.00%		L0P9D2              	100.00%
Bootstrap support for G1T4I4 as seed ortholog is 99%.
Bootstrap support for L0P9D2 as seed ortholog is 100%.

Group of orthologs #906. Best score 157 bits
Score difference with first non-orthologous sequence - O.cuniculus:157 P.jiroveci:157

G1T3I0              	100.00%		L0PFX5              	100.00%
Bootstrap support for G1T3I0 as seed ortholog is 100%.
Bootstrap support for L0PFX5 as seed ortholog is 100%.

Group of orthologs #907. Best score 156 bits
Score difference with first non-orthologous sequence - O.cuniculus:156 P.jiroveci:156

G1TDL2              	100.00%		L0PBI9              	100.00%
G1U1G9              	95.95%		
G1TTU0              	10.81%		
Bootstrap support for G1TDL2 as seed ortholog is 100%.
Bootstrap support for L0PBI9 as seed ortholog is 100%.

Group of orthologs #908. Best score 156 bits
Score difference with first non-orthologous sequence - O.cuniculus:156 P.jiroveci:156

G1TXF6              	100.00%		L0PDH1              	100.00%
G1U5T4              	97.48%		
G1TM43              	95.80%		
Bootstrap support for G1TXF6 as seed ortholog is 100%.
Bootstrap support for L0PDH1 as seed ortholog is 100%.

Group of orthologs #909. Best score 156 bits
Score difference with first non-orthologous sequence - O.cuniculus:69 P.jiroveci:99

G1T767              	100.00%		L0PBF9              	100.00%
Bootstrap support for G1T767 as seed ortholog is 98%.
Bootstrap support for L0PBF9 as seed ortholog is 99%.

Group of orthologs #910. Best score 155 bits
Score difference with first non-orthologous sequence - O.cuniculus:155 P.jiroveci:155

G1T0H9              	100.00%		L0PEQ2              	100.00%
G1SYD8              	16.00%		L0P999              	59.26%
Bootstrap support for G1T0H9 as seed ortholog is 100%.
Bootstrap support for L0PEQ2 as seed ortholog is 100%.

Group of orthologs #911. Best score 155 bits
Score difference with first non-orthologous sequence - O.cuniculus:155 P.jiroveci:155

G1T2S5              	100.00%		L0PI55              	100.00%
                    	       		L0P840              	83.55%
Bootstrap support for G1T2S5 as seed ortholog is 100%.
Bootstrap support for L0PI55 as seed ortholog is 100%.

Group of orthologs #912. Best score 155 bits
Score difference with first non-orthologous sequence - O.cuniculus:155 P.jiroveci:155

G1SLQ9              	100.00%		L0PC68              	100.00%
Bootstrap support for G1SLQ9 as seed ortholog is 100%.
Bootstrap support for L0PC68 as seed ortholog is 100%.

Group of orthologs #913. Best score 155 bits
Score difference with first non-orthologous sequence - O.cuniculus:155 P.jiroveci:155

G1T3U3              	100.00%		L0PEN3              	100.00%
Bootstrap support for G1T3U3 as seed ortholog is 100%.
Bootstrap support for L0PEN3 as seed ortholog is 100%.

Group of orthologs #914. Best score 155 bits
Score difference with first non-orthologous sequence - O.cuniculus:71 P.jiroveci:155

G1TN62              	100.00%		L0P8H6              	100.00%
Bootstrap support for G1TN62 as seed ortholog is 99%.
Bootstrap support for L0P8H6 as seed ortholog is 100%.

Group of orthologs #915. Best score 155 bits
Score difference with first non-orthologous sequence - O.cuniculus:85 P.jiroveci:155

G1TMD0              	100.00%		L0PF75              	100.00%
Bootstrap support for G1TMD0 as seed ortholog is 98%.
Bootstrap support for L0PF75 as seed ortholog is 100%.

Group of orthologs #916. Best score 154 bits
Score difference with first non-orthologous sequence - O.cuniculus:154 P.jiroveci:154

G1T1P8              	100.00%		L0PCX3              	100.00%
G1T1K6              	25.57%		
Bootstrap support for G1T1P8 as seed ortholog is 100%.
Bootstrap support for L0PCX3 as seed ortholog is 100%.

Group of orthologs #917. Best score 154 bits
Score difference with first non-orthologous sequence - O.cuniculus:154 P.jiroveci:154

G1TDS8              	100.00%		L0PF65              	100.00%
Bootstrap support for G1TDS8 as seed ortholog is 100%.
Bootstrap support for L0PF65 as seed ortholog is 100%.

Group of orthologs #918. Best score 153 bits
Score difference with first non-orthologous sequence - O.cuniculus:64 P.jiroveci:91

G1SER3              	100.00%		L0PDE1              	100.00%
G1SZ69              	8.94%		
G1TNZ3              	5.96%		
Bootstrap support for G1SER3 as seed ortholog is 97%.
Bootstrap support for L0PDE1 as seed ortholog is 99%.

Group of orthologs #919. Best score 153 bits
Score difference with first non-orthologous sequence - O.cuniculus:111 P.jiroveci:153

G1TJC9              	100.00%		L0PBU7              	100.00%
G1T209              	37.98%		
Bootstrap support for G1TJC9 as seed ortholog is 100%.
Bootstrap support for L0PBU7 as seed ortholog is 100%.

Group of orthologs #920. Best score 153 bits
Score difference with first non-orthologous sequence - O.cuniculus:56 P.jiroveci:153

G1SWW6              	100.00%		L0PF33              	100.00%
Bootstrap support for G1SWW6 as seed ortholog is 99%.
Bootstrap support for L0PF33 as seed ortholog is 100%.

Group of orthologs #921. Best score 153 bits
Score difference with first non-orthologous sequence - O.cuniculus:153 P.jiroveci:153

G1TYU7              	100.00%		L0PFQ7              	100.00%
Bootstrap support for G1TYU7 as seed ortholog is 100%.
Bootstrap support for L0PFQ7 as seed ortholog is 100%.

Group of orthologs #922. Best score 152 bits
Score difference with first non-orthologous sequence - O.cuniculus:152 P.jiroveci:152

G1SPK3              	100.00%		L0PA22              	100.00%
Bootstrap support for G1SPK3 as seed ortholog is 100%.
Bootstrap support for L0PA22 as seed ortholog is 100%.

Group of orthologs #923. Best score 151 bits
Score difference with first non-orthologous sequence - O.cuniculus:151 P.jiroveci:151

G1TH09              	100.00%		L0PGY5              	100.00%
G1STW0              	77.48%		
G1TW01              	35.12%		
G1TUS2              	34.32%		
G1U7J1              	18.23%		
Bootstrap support for G1TH09 as seed ortholog is 100%.
Bootstrap support for L0PGY5 as seed ortholog is 100%.

Group of orthologs #924. Best score 151 bits
Score difference with first non-orthologous sequence - O.cuniculus:151 P.jiroveci:151

G1T3D8              	100.00%		L0PEG0              	100.00%
G1TS40              	91.87%		
G1TPS1              	82.11%		
G1U0Q6              	26.02%		
Bootstrap support for G1T3D8 as seed ortholog is 100%.
Bootstrap support for L0PEG0 as seed ortholog is 100%.

Group of orthologs #925. Best score 151 bits
Score difference with first non-orthologous sequence - O.cuniculus:151 P.jiroveci:151

G1TAH7              	100.00%		L0PF66              	100.00%
G1TPB0              	55.57%		
G1SE97              	40.63%		
Bootstrap support for G1TAH7 as seed ortholog is 100%.
Bootstrap support for L0PF66 as seed ortholog is 100%.

Group of orthologs #926. Best score 151 bits
Score difference with first non-orthologous sequence - O.cuniculus:151 P.jiroveci:151

Q6IVG4              	100.00%		L0PB30              	100.00%
G1T956              	41.48%		
G1SK97              	5.16%		
Bootstrap support for Q6IVG4 as seed ortholog is 100%.
Bootstrap support for L0PB30 as seed ortholog is 100%.

Group of orthologs #927. Best score 151 bits
Score difference with first non-orthologous sequence - O.cuniculus:151 P.jiroveci:151

G1T1Z2              	100.00%		L0PDV9              	100.00%
Bootstrap support for G1T1Z2 as seed ortholog is 100%.
Bootstrap support for L0PDV9 as seed ortholog is 100%.

Group of orthologs #928. Best score 151 bits
Score difference with first non-orthologous sequence - O.cuniculus:151 P.jiroveci:33

G1SZD2              	100.00%		L0PGP9              	100.00%
Bootstrap support for G1SZD2 as seed ortholog is 100%.
Bootstrap support for L0PGP9 as seed ortholog is 85%.

Group of orthologs #929. Best score 151 bits
Score difference with first non-orthologous sequence - O.cuniculus:151 P.jiroveci:151

G1TBG2              	100.00%		L0PBQ0              	100.00%
Bootstrap support for G1TBG2 as seed ortholog is 100%.
Bootstrap support for L0PBQ0 as seed ortholog is 100%.

Group of orthologs #930. Best score 150 bits
Score difference with first non-orthologous sequence - O.cuniculus:150 P.jiroveci:150

G1SQ42              	100.00%		L0P7U6              	100.00%
G1U365              	84.98%		
G1TZ25              	51.79%		
Bootstrap support for G1SQ42 as seed ortholog is 100%.
Bootstrap support for L0P7U6 as seed ortholog is 100%.

Group of orthologs #931. Best score 150 bits
Score difference with first non-orthologous sequence - O.cuniculus:150 P.jiroveci:150

G1SWP4              	100.00%		L0P948              	100.00%
Bootstrap support for G1SWP4 as seed ortholog is 100%.
Bootstrap support for L0P948 as seed ortholog is 100%.

Group of orthologs #932. Best score 150 bits
Score difference with first non-orthologous sequence - O.cuniculus:150 P.jiroveci:150

G1T9J2              	100.00%		L0PAY0              	100.00%
Bootstrap support for G1T9J2 as seed ortholog is 100%.
Bootstrap support for L0PAY0 as seed ortholog is 100%.

Group of orthologs #933. Best score 150 bits
Score difference with first non-orthologous sequence - O.cuniculus:150 P.jiroveci:150

G1U1V2              	100.00%		L0P799              	100.00%
Bootstrap support for G1U1V2 as seed ortholog is 100%.
Bootstrap support for L0P799 as seed ortholog is 100%.

Group of orthologs #934. Best score 149 bits
Score difference with first non-orthologous sequence - O.cuniculus:149 P.jiroveci:149

G1TKR7              	100.00%		L0PB59              	100.00%
G1TWT5              	86.57%		
Bootstrap support for G1TKR7 as seed ortholog is 100%.
Bootstrap support for L0PB59 as seed ortholog is 100%.

Group of orthologs #935. Best score 149 bits
Score difference with first non-orthologous sequence - O.cuniculus:149 P.jiroveci:149

G1SLN8              	100.00%		L0PGP5              	100.00%
Bootstrap support for G1SLN8 as seed ortholog is 100%.
Bootstrap support for L0PGP5 as seed ortholog is 100%.

Group of orthologs #936. Best score 149 bits
Score difference with first non-orthologous sequence - O.cuniculus:149 P.jiroveci:149

G1SY38              	100.00%		L0P7V8              	100.00%
Bootstrap support for G1SY38 as seed ortholog is 100%.
Bootstrap support for L0P7V8 as seed ortholog is 100%.

Group of orthologs #937. Best score 149 bits
Score difference with first non-orthologous sequence - O.cuniculus:27 P.jiroveci:149

G1T398              	100.00%		L0P7E9              	100.00%
Bootstrap support for G1T398 as seed ortholog is 84%.
Bootstrap support for L0P7E9 as seed ortholog is 100%.

Group of orthologs #938. Best score 149 bits
Score difference with first non-orthologous sequence - O.cuniculus:149 P.jiroveci:149

G1T245              	100.00%		L0PFG9              	100.00%
Bootstrap support for G1T245 as seed ortholog is 100%.
Bootstrap support for L0PFG9 as seed ortholog is 100%.

Group of orthologs #939. Best score 149 bits
Score difference with first non-orthologous sequence - O.cuniculus:149 P.jiroveci:149

G1T579              	100.00%		L0PGI9              	100.00%
Bootstrap support for G1T579 as seed ortholog is 100%.
Bootstrap support for L0PGI9 as seed ortholog is 100%.

Group of orthologs #940. Best score 148 bits
Score difference with first non-orthologous sequence - O.cuniculus:148 P.jiroveci:148

G1U6T1              	100.00%		L0PE18              	100.00%
G1SRL5              	75.76%		
G1TMC5              	34.24%		
G1T7Q5              	34.14%		
G1TZV1              	33.94%		
G1SJQ8              	33.84%		
G1T6X7              	33.74%		
G1TDR0              	33.74%		
G1SRM0              	32.63%		
G1T7P3              	32.53%		
G1SN51              	32.12%		
P14943              	31.82%		
G1SNB6              	31.52%		
G1T6L1              	31.11%		
G1SNB1              	27.98%		
G1SF73              	27.27%		
G1T441              	25.96%		
G1SF18              	22.93%		
G1SP52              	13.54%		
G1TD52              	12.42%		
G1TYL9              	12.32%		
G1U7A3              	10.00%		
P21927              	9.70%		
G1SDM4              	8.69%		
Q29499              	8.48%		
G1TFP2              	6.97%		
Bootstrap support for G1U6T1 as seed ortholog is 100%.
Bootstrap support for L0PE18 as seed ortholog is 100%.

Group of orthologs #941. Best score 148 bits
Score difference with first non-orthologous sequence - O.cuniculus:148 P.jiroveci:148

G1TFI4              	100.00%		L0PB34              	100.00%
G1TKK2              	63.35%		
G1SGJ3              	35.40%		
Bootstrap support for G1TFI4 as seed ortholog is 100%.
Bootstrap support for L0PB34 as seed ortholog is 100%.

Group of orthologs #942. Best score 148 bits
Score difference with first non-orthologous sequence - O.cuniculus:148 P.jiroveci:148

G1SJN1              	100.00%		L0P9B3              	100.00%
Bootstrap support for G1SJN1 as seed ortholog is 100%.
Bootstrap support for L0P9B3 as seed ortholog is 100%.

Group of orthologs #943. Best score 148 bits
Score difference with first non-orthologous sequence - O.cuniculus:47 P.jiroveci:148

G1SR07              	100.00%		L0P903              	100.00%
Bootstrap support for G1SR07 as seed ortholog is 91%.
Bootstrap support for L0P903 as seed ortholog is 100%.

Group of orthologs #944. Best score 148 bits
Score difference with first non-orthologous sequence - O.cuniculus:148 P.jiroveci:148

G1TRA9              	100.00%		L0PDZ3              	100.00%
Bootstrap support for G1TRA9 as seed ortholog is 100%.
Bootstrap support for L0PDZ3 as seed ortholog is 100%.

Group of orthologs #945. Best score 147 bits
Score difference with first non-orthologous sequence - O.cuniculus:147 P.jiroveci:147

G1T617              	100.00%		L0P8G7              	100.00%
Bootstrap support for G1T617 as seed ortholog is 100%.
Bootstrap support for L0P8G7 as seed ortholog is 100%.

Group of orthologs #946. Best score 147 bits
Score difference with first non-orthologous sequence - O.cuniculus:93 P.jiroveci:147

G1T134              	100.00%		L0PDY2              	100.00%
Bootstrap support for G1T134 as seed ortholog is 99%.
Bootstrap support for L0PDY2 as seed ortholog is 100%.

Group of orthologs #947. Best score 147 bits
Score difference with first non-orthologous sequence - O.cuniculus:147 P.jiroveci:147

G1T7M3              	100.00%		L0P9D1              	100.00%
Bootstrap support for G1T7M3 as seed ortholog is 100%.
Bootstrap support for L0P9D1 as seed ortholog is 100%.

Group of orthologs #948. Best score 147 bits
Score difference with first non-orthologous sequence - O.cuniculus:147 P.jiroveci:147

G1TAM5              	100.00%		L0PA36              	100.00%
Bootstrap support for G1TAM5 as seed ortholog is 100%.
Bootstrap support for L0PA36 as seed ortholog is 100%.

Group of orthologs #949. Best score 147 bits
Score difference with first non-orthologous sequence - O.cuniculus:147 P.jiroveci:147

G1TBC0              	100.00%		L0P9V3              	100.00%
Bootstrap support for G1TBC0 as seed ortholog is 100%.
Bootstrap support for L0P9V3 as seed ortholog is 100%.

Group of orthologs #950. Best score 146 bits
Score difference with first non-orthologous sequence - O.cuniculus:75 P.jiroveci:146

G1T026              	100.00%		L0PBZ4              	100.00%
G1TLN3              	94.46%		
Bootstrap support for G1T026 as seed ortholog is 99%.
Bootstrap support for L0PBZ4 as seed ortholog is 100%.

Group of orthologs #951. Best score 146 bits
Score difference with first non-orthologous sequence - O.cuniculus:146 P.jiroveci:146

G1TGZ8              	100.00%		L0P778              	100.00%
G1TS61              	77.04%		
Bootstrap support for G1TGZ8 as seed ortholog is 100%.
Bootstrap support for L0P778 as seed ortholog is 100%.

Group of orthologs #952. Best score 146 bits
Score difference with first non-orthologous sequence - O.cuniculus:146 P.jiroveci:146

G1TX90              	100.00%		L0PFP7              	100.00%
G1SQX4              	82.48%		
Bootstrap support for G1TX90 as seed ortholog is 100%.
Bootstrap support for L0PFP7 as seed ortholog is 100%.

Group of orthologs #953. Best score 146 bits
Score difference with first non-orthologous sequence - O.cuniculus:146 P.jiroveci:146

G1SD62              	100.00%		L0P7V4              	100.00%
Bootstrap support for G1SD62 as seed ortholog is 100%.
Bootstrap support for L0P7V4 as seed ortholog is 100%.

Group of orthologs #954. Best score 146 bits
Score difference with first non-orthologous sequence - O.cuniculus:146 P.jiroveci:146

G1SIP9              	100.00%		L0PEZ4              	100.00%
Bootstrap support for G1SIP9 as seed ortholog is 100%.
Bootstrap support for L0PEZ4 as seed ortholog is 100%.

Group of orthologs #955. Best score 146 bits
Score difference with first non-orthologous sequence - O.cuniculus:64 P.jiroveci:82

G1SWE5              	100.00%		L0P7L3              	100.00%
Bootstrap support for G1SWE5 as seed ortholog is 97%.
Bootstrap support for L0P7L3 as seed ortholog is 99%.

Group of orthologs #956. Best score 146 bits
Score difference with first non-orthologous sequence - O.cuniculus:88 P.jiroveci:146

G1SSF6              	100.00%		L0PEV3              	100.00%
Bootstrap support for G1SSF6 as seed ortholog is 99%.
Bootstrap support for L0PEV3 as seed ortholog is 100%.

Group of orthologs #957. Best score 146 bits
Score difference with first non-orthologous sequence - O.cuniculus:146 P.jiroveci:23

G1SXI8              	100.00%		L0PCJ0              	100.00%
Bootstrap support for G1SXI8 as seed ortholog is 100%.
Bootstrap support for L0PCJ0 as seed ortholog is 61%.
Alternative seed ortholog is L0PGZ6 (23 bits away from this cluster)

Group of orthologs #958. Best score 146 bits
Score difference with first non-orthologous sequence - O.cuniculus:94 P.jiroveci:146

G1T5A7              	100.00%		L0P7A4              	100.00%
Bootstrap support for G1T5A7 as seed ortholog is 99%.
Bootstrap support for L0P7A4 as seed ortholog is 100%.

Group of orthologs #959. Best score 146 bits
Score difference with first non-orthologous sequence - O.cuniculus:146 P.jiroveci:146

G1T8N5              	100.00%		L0P9U0              	100.00%
Bootstrap support for G1T8N5 as seed ortholog is 100%.
Bootstrap support for L0P9U0 as seed ortholog is 100%.

Group of orthologs #960. Best score 146 bits
Score difference with first non-orthologous sequence - O.cuniculus:146 P.jiroveci:146

G1T4L6              	100.00%		L0PEC9              	100.00%
Bootstrap support for G1T4L6 as seed ortholog is 100%.
Bootstrap support for L0PEC9 as seed ortholog is 100%.

Group of orthologs #961. Best score 146 bits
Score difference with first non-orthologous sequence - O.cuniculus:146 P.jiroveci:146

G1TN09              	100.00%		L0P7U2              	100.00%
Bootstrap support for G1TN09 as seed ortholog is 100%.
Bootstrap support for L0P7U2 as seed ortholog is 100%.

Group of orthologs #962. Best score 145 bits
Score difference with first non-orthologous sequence - O.cuniculus:43 P.jiroveci:61

G1U2G6              	100.00%		L0P9Y3              	100.00%
G1SI41              	34.06%		
G1U2V6              	30.80%		
O19048              	28.17%		
G1TWS1              	17.80%		
G1U125              	9.75%		
Bootstrap support for G1U2G6 as seed ortholog is 93%.
Bootstrap support for L0P9Y3 as seed ortholog is 95%.

Group of orthologs #963. Best score 145 bits
Score difference with first non-orthologous sequence - O.cuniculus:145 P.jiroveci:145

G1SVI1              	100.00%		L0PG65              	100.00%
G1SG25              	39.54%		
Bootstrap support for G1SVI1 as seed ortholog is 100%.
Bootstrap support for L0PG65 as seed ortholog is 100%.

Group of orthologs #964. Best score 144 bits
Score difference with first non-orthologous sequence - O.cuniculus:19 P.jiroveci:144

G1T0E3              	100.00%		L0P963              	100.00%
Bootstrap support for G1T0E3 as seed ortholog is 69%.
Alternative seed ortholog is G1T0R0 (19 bits away from this cluster)
Bootstrap support for L0P963 as seed ortholog is 100%.

Group of orthologs #965. Best score 144 bits
Score difference with first non-orthologous sequence - O.cuniculus:144 P.jiroveci:144

G1U354              	100.00%		L0P9F5              	100.00%
Bootstrap support for G1U354 as seed ortholog is 100%.
Bootstrap support for L0P9F5 as seed ortholog is 100%.

Group of orthologs #966. Best score 144 bits
Score difference with first non-orthologous sequence - O.cuniculus:144 P.jiroveci:144

G1TXP5              	100.00%		L0PEG7              	100.00%
Bootstrap support for G1TXP5 as seed ortholog is 100%.
Bootstrap support for L0PEG7 as seed ortholog is 100%.

Group of orthologs #967. Best score 143 bits
Score difference with first non-orthologous sequence - O.cuniculus:143 P.jiroveci:143

G1U608              	100.00%		L0PFA7              	100.00%
G1TXY6              	27.45%		
G1TLW4              	21.14%		
Bootstrap support for G1U608 as seed ortholog is 100%.
Bootstrap support for L0PFA7 as seed ortholog is 100%.

Group of orthologs #968. Best score 143 bits
Score difference with first non-orthologous sequence - O.cuniculus:143 P.jiroveci:143

G1SJ30              	100.00%		L0PAS7              	100.00%
Bootstrap support for G1SJ30 as seed ortholog is 100%.
Bootstrap support for L0PAS7 as seed ortholog is 100%.

Group of orthologs #969. Best score 143 bits
Score difference with first non-orthologous sequence - O.cuniculus:90 P.jiroveci:99

G1SR25              	100.00%		L0PA67              	100.00%
Bootstrap support for G1SR25 as seed ortholog is 99%.
Bootstrap support for L0PA67 as seed ortholog is 99%.

Group of orthologs #970. Best score 143 bits
Score difference with first non-orthologous sequence - O.cuniculus:143 P.jiroveci:143

G1SQI9              	100.00%		L0PCC8              	100.00%
Bootstrap support for G1SQI9 as seed ortholog is 100%.
Bootstrap support for L0PCC8 as seed ortholog is 100%.

Group of orthologs #971. Best score 143 bits
Score difference with first non-orthologous sequence - O.cuniculus:143 P.jiroveci:143

G1SRX9              	100.00%		L0PFD5              	100.00%
Bootstrap support for G1SRX9 as seed ortholog is 100%.
Bootstrap support for L0PFD5 as seed ortholog is 100%.

Group of orthologs #972. Best score 143 bits
Score difference with first non-orthologous sequence - O.cuniculus:19 P.jiroveci:143

G1TP80              	100.00%		L0P9Y2              	100.00%
Bootstrap support for G1TP80 as seed ortholog is 79%.
Bootstrap support for L0P9Y2 as seed ortholog is 100%.

Group of orthologs #973. Best score 143 bits
Score difference with first non-orthologous sequence - O.cuniculus:143 P.jiroveci:143

G1TH48              	100.00%		L0PFP4              	100.00%
Bootstrap support for G1TH48 as seed ortholog is 100%.
Bootstrap support for L0PFP4 as seed ortholog is 100%.

Group of orthologs #974. Best score 143 bits
Score difference with first non-orthologous sequence - O.cuniculus:92 P.jiroveci:143

G1TPH3              	100.00%		L0PDX9              	100.00%
Bootstrap support for G1TPH3 as seed ortholog is 99%.
Bootstrap support for L0PDX9 as seed ortholog is 100%.

Group of orthologs #975. Best score 143 bits
Score difference with first non-orthologous sequence - O.cuniculus:143 P.jiroveci:143

G1TYK8              	100.00%		L0P8D7              	100.00%
Bootstrap support for G1TYK8 as seed ortholog is 100%.
Bootstrap support for L0P8D7 as seed ortholog is 100%.

Group of orthologs #976. Best score 142 bits
Score difference with first non-orthologous sequence - O.cuniculus:142 P.jiroveci:142

G1SE28              	100.00%		L0PA83              	100.00%
G1TH55              	97.63%		
G1TLD5              	85.21%		
Bootstrap support for G1SE28 as seed ortholog is 100%.
Bootstrap support for L0PA83 as seed ortholog is 100%.

Group of orthologs #977. Best score 142 bits
Score difference with first non-orthologous sequence - O.cuniculus:142 P.jiroveci:142

G1SH39              	100.00%		L0PG78              	100.00%
Bootstrap support for G1SH39 as seed ortholog is 100%.
Bootstrap support for L0PG78 as seed ortholog is 100%.

Group of orthologs #978. Best score 141 bits
Score difference with first non-orthologous sequence - O.cuniculus:141 P.jiroveci:141

G1ST66              	100.00%		L0P800              	100.00%
G1TIS2              	63.33%		
G1TSD6              	19.52%		
Bootstrap support for G1ST66 as seed ortholog is 100%.
Bootstrap support for L0P800 as seed ortholog is 100%.

Group of orthologs #979. Best score 141 bits
Score difference with first non-orthologous sequence - O.cuniculus:141 P.jiroveci:141

G1TS12              	100.00%		L0P780              	100.00%
G1TAT3              	48.97%		
Bootstrap support for G1TS12 as seed ortholog is 100%.
Bootstrap support for L0P780 as seed ortholog is 100%.

Group of orthologs #980. Best score 141 bits
Score difference with first non-orthologous sequence - O.cuniculus:141 P.jiroveci:141

G1SQR9              	100.00%		L0P733              	100.00%
Bootstrap support for G1SQR9 as seed ortholog is 100%.
Bootstrap support for L0P733 as seed ortholog is 100%.

Group of orthologs #981. Best score 141 bits
Score difference with first non-orthologous sequence - O.cuniculus:141 P.jiroveci:141

G1SJK9              	100.00%		L0PFR0              	100.00%
Bootstrap support for G1SJK9 as seed ortholog is 100%.
Bootstrap support for L0PFR0 as seed ortholog is 100%.

Group of orthologs #982. Best score 141 bits
Score difference with first non-orthologous sequence - O.cuniculus:141 P.jiroveci:141

G1TI68              	100.00%		L0PBI8              	100.00%
Bootstrap support for G1TI68 as seed ortholog is 100%.
Bootstrap support for L0PBI8 as seed ortholog is 100%.

Group of orthologs #983. Best score 140 bits
Score difference with first non-orthologous sequence - O.cuniculus:140 P.jiroveci:140

G1SZ95              	100.00%		L0P8Z8              	100.00%
                    	       		L0PFN6              	78.57%
Bootstrap support for G1SZ95 as seed ortholog is 100%.
Bootstrap support for L0P8Z8 as seed ortholog is 100%.

Group of orthologs #984. Best score 140 bits
Score difference with first non-orthologous sequence - O.cuniculus:140 P.jiroveci:140

G1T6C8              	100.00%		L0PDW7              	100.00%
                    	       		L0PIN1              	58.79%
Bootstrap support for G1T6C8 as seed ortholog is 100%.
Bootstrap support for L0PDW7 as seed ortholog is 100%.

Group of orthologs #985. Best score 140 bits
Score difference with first non-orthologous sequence - O.cuniculus:140 P.jiroveci:140

G1T0F6              	100.00%		L0PEL6              	100.00%
Bootstrap support for G1T0F6 as seed ortholog is 100%.
Bootstrap support for L0PEL6 as seed ortholog is 100%.

Group of orthologs #986. Best score 139 bits
Score difference with first non-orthologous sequence - O.cuniculus:139 P.jiroveci:139

G1SW59              	100.00%		L0PDX2              	100.00%
Bootstrap support for G1SW59 as seed ortholog is 100%.
Bootstrap support for L0PDX2 as seed ortholog is 100%.

Group of orthologs #987. Best score 138 bits
Score difference with first non-orthologous sequence - O.cuniculus:138 P.jiroveci:138

G1TRF7              	100.00%		L0PCA3              	100.00%
G1TIK7              	18.95%		
G1U3P1              	15.53%		
Bootstrap support for G1TRF7 as seed ortholog is 100%.
Bootstrap support for L0PCA3 as seed ortholog is 100%.

Group of orthologs #988. Best score 138 bits
Score difference with first non-orthologous sequence - O.cuniculus:138 P.jiroveci:138

G1SCZ3              	100.00%		L0PHD0              	100.00%
Bootstrap support for G1SCZ3 as seed ortholog is 100%.
Bootstrap support for L0PHD0 as seed ortholog is 100%.

Group of orthologs #989. Best score 138 bits
Score difference with first non-orthologous sequence - O.cuniculus:138 P.jiroveci:138

G1SH69              	100.00%		L0PFY6              	100.00%
Bootstrap support for G1SH69 as seed ortholog is 100%.
Bootstrap support for L0PFY6 as seed ortholog is 100%.

Group of orthologs #990. Best score 138 bits
Score difference with first non-orthologous sequence - O.cuniculus:138 P.jiroveci:138

G1TEP8              	100.00%		L0PAT4              	100.00%
Bootstrap support for G1TEP8 as seed ortholog is 100%.
Bootstrap support for L0PAT4 as seed ortholog is 100%.

Group of orthologs #991. Best score 138 bits
Score difference with first non-orthologous sequence - O.cuniculus:86 P.jiroveci:138

G1U5Q2              	100.00%		L0P838              	100.00%
Bootstrap support for G1U5Q2 as seed ortholog is 99%.
Bootstrap support for L0P838 as seed ortholog is 100%.

Group of orthologs #992. Best score 138 bits
Score difference with first non-orthologous sequence - O.cuniculus:138 P.jiroveci:138

G1U8H6              	100.00%		L0PDW9              	100.00%
Bootstrap support for G1U8H6 as seed ortholog is 100%.
Bootstrap support for L0PDW9 as seed ortholog is 100%.

Group of orthologs #993. Best score 137 bits
Score difference with first non-orthologous sequence - O.cuniculus:137 P.jiroveci:137

G1SD38              	100.00%		L0PE36              	100.00%
G1SKD5              	39.80%		
Bootstrap support for G1SD38 as seed ortholog is 100%.
Bootstrap support for L0PE36 as seed ortholog is 100%.

Group of orthologs #994. Best score 137 bits
Score difference with first non-orthologous sequence - O.cuniculus:137 P.jiroveci:137

G1SI50              	100.00%		L0PD70              	100.00%
                    	       		L0P9Q7              	82.53%
Bootstrap support for G1SI50 as seed ortholog is 100%.
Bootstrap support for L0PD70 as seed ortholog is 100%.

Group of orthologs #995. Best score 136 bits
Score difference with first non-orthologous sequence - O.cuniculus:136 P.jiroveci:136

G1TC98              	100.00%		L0P9N5              	100.00%
G1TK78              	40.29%		
G1TUA2              	15.83%		
Bootstrap support for G1TC98 as seed ortholog is 100%.
Bootstrap support for L0P9N5 as seed ortholog is 100%.

Group of orthologs #996. Best score 136 bits
Score difference with first non-orthologous sequence - O.cuniculus:136 P.jiroveci:136

G1TAA1              	100.00%		L0PDR9              	100.00%
                    	       		L0P8I3              	73.11%
Bootstrap support for G1TAA1 as seed ortholog is 100%.
Bootstrap support for L0PDR9 as seed ortholog is 100%.

Group of orthologs #997. Best score 136 bits
Score difference with first non-orthologous sequence - O.cuniculus:136 P.jiroveci:136

G1SGS8              	100.00%		L0PBG3              	100.00%
Bootstrap support for G1SGS8 as seed ortholog is 100%.
Bootstrap support for L0PBG3 as seed ortholog is 100%.

Group of orthologs #998. Best score 136 bits
Score difference with first non-orthologous sequence - O.cuniculus:136 P.jiroveci:136

G1TZ26              	100.00%		L0PAN5              	100.00%
Bootstrap support for G1TZ26 as seed ortholog is 100%.
Bootstrap support for L0PAN5 as seed ortholog is 100%.

Group of orthologs #999. Best score 135 bits
Score difference with first non-orthologous sequence - O.cuniculus:135 P.jiroveci:135

G1T2G3              	100.00%		L0PFZ7              	100.00%
G1TQ57              	54.75%		
Bootstrap support for G1T2G3 as seed ortholog is 100%.
Bootstrap support for L0PFZ7 as seed ortholog is 100%.

Group of orthologs #1000. Best score 135 bits
Score difference with first non-orthologous sequence - O.cuniculus:73 P.jiroveci:135

G1T437              	100.00%		L0P8I2              	100.00%
Bootstrap support for G1T437 as seed ortholog is 99%.
Bootstrap support for L0P8I2 as seed ortholog is 100%.

Group of orthologs #1001. Best score 134 bits
Score difference with first non-orthologous sequence - O.cuniculus:134 P.jiroveci:134

G1SDE1              	100.00%		L0PCN2              	100.00%
Bootstrap support for G1SDE1 as seed ortholog is 100%.
Bootstrap support for L0PCN2 as seed ortholog is 100%.

Group of orthologs #1002. Best score 134 bits
Score difference with first non-orthologous sequence - O.cuniculus:134 P.jiroveci:134

G1SUB5              	100.00%		L0PG28              	100.00%
Bootstrap support for G1SUB5 as seed ortholog is 100%.
Bootstrap support for L0PG28 as seed ortholog is 100%.

Group of orthologs #1003. Best score 134 bits
Score difference with first non-orthologous sequence - O.cuniculus:134 P.jiroveci:134

G1SZH8              	100.00%		L0PEV6              	100.00%
Bootstrap support for G1SZH8 as seed ortholog is 100%.
Bootstrap support for L0PEV6 as seed ortholog is 100%.

Group of orthologs #1004. Best score 134 bits
Score difference with first non-orthologous sequence - O.cuniculus:134 P.jiroveci:134

G1U3G6              	100.00%		L0P7A1              	100.00%
Bootstrap support for G1U3G6 as seed ortholog is 100%.
Bootstrap support for L0P7A1 as seed ortholog is 100%.

Group of orthologs #1005. Best score 133 bits
Score difference with first non-orthologous sequence - O.cuniculus:133 P.jiroveci:133

G1SFE9              	100.00%		L0PFS7              	100.00%
G1TIY3              	39.43%		
G1TEH6              	38.01%		
Bootstrap support for G1SFE9 as seed ortholog is 100%.
Bootstrap support for L0PFS7 as seed ortholog is 100%.

Group of orthologs #1006. Best score 133 bits
Score difference with first non-orthologous sequence - O.cuniculus:72 P.jiroveci:46

G1SRQ2              	100.00%		L0PFG2              	100.00%
G1SF93              	35.71%		
Bootstrap support for G1SRQ2 as seed ortholog is 98%.
Bootstrap support for L0PFG2 as seed ortholog is 95%.

Group of orthologs #1007. Best score 133 bits
Score difference with first non-orthologous sequence - O.cuniculus:133 P.jiroveci:133

G1T419              	100.00%		L0P7K4              	100.00%
                    	       		L0P859              	81.89%
Bootstrap support for G1T419 as seed ortholog is 100%.
Bootstrap support for L0P7K4 as seed ortholog is 100%.

Group of orthologs #1008. Best score 133 bits
Score difference with first non-orthologous sequence - O.cuniculus:133 P.jiroveci:133

G1TY59              	100.00%		L0PG38              	100.00%
G1TL88              	36.54%		
Bootstrap support for G1TY59 as seed ortholog is 100%.
Bootstrap support for L0PG38 as seed ortholog is 100%.

Group of orthologs #1009. Best score 133 bits
Score difference with first non-orthologous sequence - O.cuniculus:65 P.jiroveci:76

G1SSZ1              	100.00%		L0P8G0              	100.00%
Bootstrap support for G1SSZ1 as seed ortholog is 99%.
Bootstrap support for L0P8G0 as seed ortholog is 99%.

Group of orthologs #1010. Best score 133 bits
Score difference with first non-orthologous sequence - O.cuniculus:133 P.jiroveci:133

G1TJE9              	100.00%		L0PFH1              	100.00%
Bootstrap support for G1TJE9 as seed ortholog is 100%.
Bootstrap support for L0PFH1 as seed ortholog is 100%.

Group of orthologs #1011. Best score 132 bits
Score difference with first non-orthologous sequence - O.cuniculus:132 P.jiroveci:132

G1SRE8              	100.00%		L0PF45              	100.00%
Bootstrap support for G1SRE8 as seed ortholog is 100%.
Bootstrap support for L0PF45 as seed ortholog is 100%.

Group of orthologs #1012. Best score 131 bits
Score difference with first non-orthologous sequence - O.cuniculus:131 P.jiroveci:131

G1SXN2              	100.00%		L0PGC9              	100.00%
G1T3G0              	82.07%		
G1T4L4              	78.80%		
Bootstrap support for G1SXN2 as seed ortholog is 100%.
Bootstrap support for L0PGC9 as seed ortholog is 100%.

Group of orthologs #1013. Best score 131 bits
Score difference with first non-orthologous sequence - O.cuniculus:131 P.jiroveci:131

G1T593              	100.00%		L0P938              	100.00%
G1TVM3              	41.67%		
Bootstrap support for G1T593 as seed ortholog is 100%.
Bootstrap support for L0P938 as seed ortholog is 100%.

Group of orthologs #1014. Best score 131 bits
Score difference with first non-orthologous sequence - O.cuniculus:131 P.jiroveci:131

G1TYQ1              	100.00%		L0PCC0              	100.00%
Bootstrap support for G1TYQ1 as seed ortholog is 100%.
Bootstrap support for L0PCC0 as seed ortholog is 100%.

Group of orthologs #1015. Best score 130 bits
Score difference with first non-orthologous sequence - O.cuniculus:130 P.jiroveci:130

G1TAC5              	100.00%		L0PCT4              	100.00%
G1T2L2              	65.37%		
G1TAB6              	48.05%		
G1SDS0              	40.73%		
Bootstrap support for G1TAC5 as seed ortholog is 100%.
Bootstrap support for L0PCT4 as seed ortholog is 100%.

Group of orthologs #1016. Best score 129 bits
Score difference with first non-orthologous sequence - O.cuniculus:129 P.jiroveci:129

B7NZG7              	100.00%		L0PBU1              	100.00%
G1T8C8              	72.28%		
Bootstrap support for B7NZG7 as seed ortholog is 100%.
Bootstrap support for L0PBU1 as seed ortholog is 100%.

Group of orthologs #1017. Best score 129 bits
Score difference with first non-orthologous sequence - O.cuniculus:129 P.jiroveci:129

G1SX02              	100.00%		L0P6Q5              	100.00%
G1TBD3              	60.70%		
Bootstrap support for G1SX02 as seed ortholog is 100%.
Bootstrap support for L0P6Q5 as seed ortholog is 100%.

Group of orthologs #1018. Best score 129 bits
Score difference with first non-orthologous sequence - O.cuniculus:129 P.jiroveci:129

P41982              	100.00%		L0PD77              	100.00%
G1U1X3              	14.52%		
Bootstrap support for P41982 as seed ortholog is 100%.
Bootstrap support for L0PD77 as seed ortholog is 100%.

Group of orthologs #1019. Best score 129 bits
Score difference with first non-orthologous sequence - O.cuniculus:129 P.jiroveci:129

G1ST30              	100.00%		L0P9M3              	100.00%
Bootstrap support for G1ST30 as seed ortholog is 100%.
Bootstrap support for L0P9M3 as seed ortholog is 100%.

Group of orthologs #1020. Best score 129 bits
Score difference with first non-orthologous sequence - O.cuniculus:85 P.jiroveci:129

G1SPH4              	100.00%		L0PG59              	100.00%
Bootstrap support for G1SPH4 as seed ortholog is 99%.
Bootstrap support for L0PG59 as seed ortholog is 100%.

Group of orthologs #1021. Best score 129 bits
Score difference with first non-orthologous sequence - O.cuniculus:129 P.jiroveci:129

G1SX57              	100.00%		L0PEB8              	100.00%
Bootstrap support for G1SX57 as seed ortholog is 100%.
Bootstrap support for L0PEB8 as seed ortholog is 100%.

Group of orthologs #1022. Best score 129 bits
Score difference with first non-orthologous sequence - O.cuniculus:74 P.jiroveci:129

G1T5H8              	100.00%		L0PDE3              	100.00%
Bootstrap support for G1T5H8 as seed ortholog is 99%.
Bootstrap support for L0PDE3 as seed ortholog is 100%.

Group of orthologs #1023. Best score 129 bits
Score difference with first non-orthologous sequence - O.cuniculus:129 P.jiroveci:129

G1T866              	100.00%		L0PD60              	100.00%
Bootstrap support for G1T866 as seed ortholog is 100%.
Bootstrap support for L0PD60 as seed ortholog is 100%.

Group of orthologs #1024. Best score 128 bits
Score difference with first non-orthologous sequence - O.cuniculus:128 P.jiroveci:128

G1SHG0              	100.00%		L0P940              	100.00%
G1TM17              	95.20%		
G1TS06              	88.00%		
G1TNX8              	81.60%		
G1U4F4              	77.60%		
G1TN61              	33.60%		
Bootstrap support for G1SHG0 as seed ortholog is 100%.
Bootstrap support for L0P940 as seed ortholog is 100%.

Group of orthologs #1025. Best score 128 bits
Score difference with first non-orthologous sequence - O.cuniculus:128 P.jiroveci:128

G1SR71              	100.00%		L0PG87              	100.00%
G1TU00              	100.00%		
Bootstrap support for G1SR71 as seed ortholog is 100%.
Bootstrap support for G1TU00 as seed ortholog is 100%.
Bootstrap support for L0PG87 as seed ortholog is 100%.

Group of orthologs #1026. Best score 128 bits
Score difference with first non-orthologous sequence - O.cuniculus:128 P.jiroveci:128

G1SZS0              	100.00%		L0P8P0              	100.00%
G1SI01              	32.52%		
Bootstrap support for G1SZS0 as seed ortholog is 100%.
Bootstrap support for L0P8P0 as seed ortholog is 100%.

Group of orthologs #1027. Best score 128 bits
Score difference with first non-orthologous sequence - O.cuniculus:128 P.jiroveci:128

G1SH81              	100.00%		L0PAA1              	100.00%
Bootstrap support for G1SH81 as seed ortholog is 100%.
Bootstrap support for L0PAA1 as seed ortholog is 100%.

Group of orthologs #1028. Best score 128 bits
Score difference with first non-orthologous sequence - O.cuniculus:128 P.jiroveci:128

G1SLJ8              	100.00%		L0P7Y4              	100.00%
Bootstrap support for G1SLJ8 as seed ortholog is 100%.
Bootstrap support for L0P7Y4 as seed ortholog is 100%.

Group of orthologs #1029. Best score 128 bits
Score difference with first non-orthologous sequence - O.cuniculus:128 P.jiroveci:128

G1SVS1              	100.00%		L0PEV4              	100.00%
Bootstrap support for G1SVS1 as seed ortholog is 100%.
Bootstrap support for L0PEV4 as seed ortholog is 100%.

Group of orthologs #1030. Best score 128 bits
Score difference with first non-orthologous sequence - O.cuniculus:128 P.jiroveci:128

G1TBL4              	100.00%		L0P9F2              	100.00%
Bootstrap support for G1TBL4 as seed ortholog is 100%.
Bootstrap support for L0P9F2 as seed ortholog is 100%.

Group of orthologs #1031. Best score 127 bits
Score difference with first non-orthologous sequence - O.cuniculus:127 P.jiroveci:127

G1SHQ3              	100.00%		L0PFM7              	100.00%
Bootstrap support for G1SHQ3 as seed ortholog is 100%.
Bootstrap support for L0PFM7 as seed ortholog is 100%.

Group of orthologs #1032. Best score 126 bits
Score difference with first non-orthologous sequence - O.cuniculus:126 P.jiroveci:126

G1TKK7              	100.00%		L0P8G3              	100.00%
G1U1E9              	48.38%		
G1U139              	44.38%		
Bootstrap support for G1TKK7 as seed ortholog is 100%.
Bootstrap support for L0P8G3 as seed ortholog is 100%.

Group of orthologs #1033. Best score 126 bits
Score difference with first non-orthologous sequence - O.cuniculus:82 P.jiroveci:126

B8K127              	100.00%		L0P9L0              	100.00%
G1U7J8              	88.24%		
Bootstrap support for B8K127 as seed ortholog is 99%.
Bootstrap support for L0P9L0 as seed ortholog is 100%.

Group of orthologs #1034. Best score 126 bits
Score difference with first non-orthologous sequence - O.cuniculus:126 P.jiroveci:126

G1SF35              	100.00%		L0PCZ0              	100.00%
Bootstrap support for G1SF35 as seed ortholog is 100%.
Bootstrap support for L0PCZ0 as seed ortholog is 100%.

Group of orthologs #1035. Best score 126 bits
Score difference with first non-orthologous sequence - O.cuniculus:126 P.jiroveci:126

G1ST34              	100.00%		L0P9B0              	100.00%
Bootstrap support for G1ST34 as seed ortholog is 100%.
Bootstrap support for L0P9B0 as seed ortholog is 100%.

Group of orthologs #1036. Best score 126 bits
Score difference with first non-orthologous sequence - O.cuniculus:126 P.jiroveci:126

G1TWB6              	100.00%		L0P795              	100.00%
Bootstrap support for G1TWB6 as seed ortholog is 100%.
Bootstrap support for L0P795 as seed ortholog is 100%.

Group of orthologs #1037. Best score 125 bits
Score difference with first non-orthologous sequence - O.cuniculus:125 P.jiroveci:125

G1SGC1              	100.00%		L0P9Q9              	100.00%
G1SKB1              	9.92%		
G1TXR7              	7.96%		
G1T213              	5.31%		
Bootstrap support for G1SGC1 as seed ortholog is 100%.
Bootstrap support for L0P9Q9 as seed ortholog is 100%.

Group of orthologs #1038. Best score 125 bits
Score difference with first non-orthologous sequence - O.cuniculus:64 P.jiroveci:125

G1SZ08              	100.00%		L0PEP9              	100.00%
G1SDN3              	88.79%		
Bootstrap support for G1SZ08 as seed ortholog is 99%.
Bootstrap support for L0PEP9 as seed ortholog is 100%.

Group of orthologs #1039. Best score 125 bits
Score difference with first non-orthologous sequence - O.cuniculus:125 P.jiroveci:125

G1SWZ7              	100.00%		L0P8W1              	100.00%
Bootstrap support for G1SWZ7 as seed ortholog is 100%.
Bootstrap support for L0P8W1 as seed ortholog is 100%.

Group of orthologs #1040. Best score 124 bits
Score difference with first non-orthologous sequence - O.cuniculus:124 P.jiroveci:124

G1SJC7              	100.00%		L0PAM9              	100.00%
G1TEW3              	50.40%		
G1U118              	46.83%		
Bootstrap support for G1SJC7 as seed ortholog is 100%.
Bootstrap support for L0PAM9 as seed ortholog is 100%.

Group of orthologs #1041. Best score 124 bits
Score difference with first non-orthologous sequence - O.cuniculus:124 P.jiroveci:124

G1SIA6              	100.00%		L0PH76              	100.00%
Bootstrap support for G1SIA6 as seed ortholog is 100%.
Bootstrap support for L0PH76 as seed ortholog is 100%.

Group of orthologs #1042. Best score 124 bits
Score difference with first non-orthologous sequence - O.cuniculus:124 P.jiroveci:124

G1SLE4              	100.00%		L0PFP3              	100.00%
Bootstrap support for G1SLE4 as seed ortholog is 100%.
Bootstrap support for L0PFP3 as seed ortholog is 100%.

Group of orthologs #1043. Best score 124 bits
Score difference with first non-orthologous sequence - O.cuniculus:124 P.jiroveci:124

G1T0B1              	100.00%		L0PG46              	100.00%
Bootstrap support for G1T0B1 as seed ortholog is 100%.
Bootstrap support for L0PG46 as seed ortholog is 100%.

Group of orthologs #1044. Best score 124 bits
Score difference with first non-orthologous sequence - O.cuniculus:82 P.jiroveci:124

G1T3R1              	100.00%		L0PFV4              	100.00%
Bootstrap support for G1T3R1 as seed ortholog is 99%.
Bootstrap support for L0PFV4 as seed ortholog is 100%.

Group of orthologs #1045. Best score 124 bits
Score difference with first non-orthologous sequence - O.cuniculus:124 P.jiroveci:124

G1TEI8              	100.00%		L0PDE5              	100.00%
Bootstrap support for G1TEI8 as seed ortholog is 100%.
Bootstrap support for L0PDE5 as seed ortholog is 100%.

Group of orthologs #1046. Best score 124 bits
Score difference with first non-orthologous sequence - O.cuniculus:124 P.jiroveci:124

G1TR26              	100.00%		L0PCZ5              	100.00%
Bootstrap support for G1TR26 as seed ortholog is 100%.
Bootstrap support for L0PCZ5 as seed ortholog is 100%.

Group of orthologs #1047. Best score 124 bits
Score difference with first non-orthologous sequence - O.cuniculus:124 P.jiroveci:124

G1TWS0              	100.00%		L0PFD1              	100.00%
Bootstrap support for G1TWS0 as seed ortholog is 100%.
Bootstrap support for L0PFD1 as seed ortholog is 100%.

Group of orthologs #1048. Best score 124 bits
Score difference with first non-orthologous sequence - O.cuniculus:124 P.jiroveci:124

P19813              	100.00%		L0PBH3              	100.00%
Bootstrap support for P19813 as seed ortholog is 100%.
Bootstrap support for L0PBH3 as seed ortholog is 100%.

Group of orthologs #1049. Best score 124 bits
Score difference with first non-orthologous sequence - O.cuniculus:124 P.jiroveci:124

G1U9D3              	100.00%		L0PCX8              	100.00%
Bootstrap support for G1U9D3 as seed ortholog is 100%.
Bootstrap support for L0PCX8 as seed ortholog is 100%.

Group of orthologs #1050. Best score 124 bits
Score difference with first non-orthologous sequence - O.cuniculus:124 P.jiroveci:124

G1U9J9              	100.00%		L0PFZ3              	100.00%
Bootstrap support for G1U9J9 as seed ortholog is 100%.
Bootstrap support for L0PFZ3 as seed ortholog is 100%.

Group of orthologs #1051. Best score 123 bits
Score difference with first non-orthologous sequence - O.cuniculus:123 P.jiroveci:123

G1T6N1              	100.00%		L0P6Z5              	100.00%
G1ST49              	23.51%		
Bootstrap support for G1T6N1 as seed ortholog is 100%.
Bootstrap support for L0P6Z5 as seed ortholog is 100%.

Group of orthologs #1052. Best score 123 bits
Score difference with first non-orthologous sequence - O.cuniculus:123 P.jiroveci:123

G1T5Q8              	100.00%		L0PA43              	100.00%
G1T6Q9              	28.35%		
Bootstrap support for G1T5Q8 as seed ortholog is 100%.
Bootstrap support for L0PA43 as seed ortholog is 100%.

Group of orthologs #1053. Best score 123 bits
Score difference with first non-orthologous sequence - O.cuniculus:123 P.jiroveci:123

G1SEQ2              	100.00%		L0PCB4              	100.00%
Bootstrap support for G1SEQ2 as seed ortholog is 100%.
Bootstrap support for L0PCB4 as seed ortholog is 100%.

Group of orthologs #1054. Best score 123 bits
Score difference with first non-orthologous sequence - O.cuniculus:123 P.jiroveci:123

G1T9C4              	100.00%		L0PB27              	100.00%
Bootstrap support for G1T9C4 as seed ortholog is 100%.
Bootstrap support for L0PB27 as seed ortholog is 100%.

Group of orthologs #1055. Best score 123 bits
Score difference with first non-orthologous sequence - O.cuniculus:123 P.jiroveci:123

G1TJW8              	100.00%		L0P8Y0              	100.00%
Bootstrap support for G1TJW8 as seed ortholog is 100%.
Bootstrap support for L0P8Y0 as seed ortholog is 100%.

Group of orthologs #1056. Best score 122 bits
Score difference with first non-orthologous sequence - O.cuniculus:122 P.jiroveci:63

G1T9D7              	100.00%		L0PCC6              	100.00%
G1U6G3              	29.55%		
G1T936              	16.05%		
Bootstrap support for G1T9D7 as seed ortholog is 100%.
Bootstrap support for L0PCC6 as seed ortholog is 92%.

Group of orthologs #1057. Best score 122 bits
Score difference with first non-orthologous sequence - O.cuniculus:122 P.jiroveci:122

G1U072              	100.00%		L0PFD0              	100.00%
G1U6Q9              	97.46%		
G1TTQ6              	96.19%		
Bootstrap support for G1U072 as seed ortholog is 100%.
Bootstrap support for L0PFD0 as seed ortholog is 100%.

Group of orthologs #1058. Best score 122 bits
Score difference with first non-orthologous sequence - O.cuniculus:122 P.jiroveci:122

G1SEX0              	100.00%		L0PE76              	100.00%
G1SPG9              	45.22%		
Bootstrap support for G1SEX0 as seed ortholog is 100%.
Bootstrap support for L0PE76 as seed ortholog is 100%.

Group of orthologs #1059. Best score 122 bits
Score difference with first non-orthologous sequence - O.cuniculus:122 P.jiroveci:122

G1SL38              	100.00%		L0PDZ4              	100.00%
G1TX74              	57.10%		
Bootstrap support for G1SL38 as seed ortholog is 100%.
Bootstrap support for L0PDZ4 as seed ortholog is 100%.

Group of orthologs #1060. Best score 122 bits
Score difference with first non-orthologous sequence - O.cuniculus:122 P.jiroveci:122

G1T0U4              	100.00%		L0PDN8              	100.00%
G1T3P4              	6.89%		
Bootstrap support for G1T0U4 as seed ortholog is 100%.
Bootstrap support for L0PDN8 as seed ortholog is 100%.

Group of orthologs #1061. Best score 122 bits
Score difference with first non-orthologous sequence - O.cuniculus:122 P.jiroveci:122

G1SEB4              	100.00%		L0PEH7              	100.00%
Bootstrap support for G1SEB4 as seed ortholog is 100%.
Bootstrap support for L0PEH7 as seed ortholog is 100%.

Group of orthologs #1062. Best score 122 bits
Score difference with first non-orthologous sequence - O.cuniculus:122 P.jiroveci:122

G1SGZ1              	100.00%		L0PEZ7              	100.00%
Bootstrap support for G1SGZ1 as seed ortholog is 100%.
Bootstrap support for L0PEZ7 as seed ortholog is 100%.

Group of orthologs #1063. Best score 121 bits
Score difference with first non-orthologous sequence - O.cuniculus:121 P.jiroveci:121

G1SHV1              	100.00%		L0P9A1              	100.00%
Bootstrap support for G1SHV1 as seed ortholog is 100%.
Bootstrap support for L0P9A1 as seed ortholog is 100%.

Group of orthologs #1064. Best score 121 bits
Score difference with first non-orthologous sequence - O.cuniculus:121 P.jiroveci:121

G1SK37              	100.00%		L0PEZ8              	100.00%
Bootstrap support for G1SK37 as seed ortholog is 100%.
Bootstrap support for L0PEZ8 as seed ortholog is 100%.

Group of orthologs #1065. Best score 121 bits
Score difference with first non-orthologous sequence - O.cuniculus:121 P.jiroveci:121

G1SX93              	100.00%		L0PFI7              	100.00%
Bootstrap support for G1SX93 as seed ortholog is 100%.
Bootstrap support for L0PFI7 as seed ortholog is 100%.

Group of orthologs #1066. Best score 121 bits
Score difference with first non-orthologous sequence - O.cuniculus:121 P.jiroveci:121

G1T5F4              	100.00%		L0PIT4              	100.00%
Bootstrap support for G1T5F4 as seed ortholog is 100%.
Bootstrap support for L0PIT4 as seed ortholog is 100%.

Group of orthologs #1067. Best score 121 bits
Score difference with first non-orthologous sequence - O.cuniculus:121 P.jiroveci:121

G1TAM1              	100.00%		L0PE35              	100.00%
Bootstrap support for G1TAM1 as seed ortholog is 100%.
Bootstrap support for L0PE35 as seed ortholog is 100%.

Group of orthologs #1068. Best score 121 bits
Score difference with first non-orthologous sequence - O.cuniculus:121 P.jiroveci:121

G1TZM7              	100.00%		L0PAK9              	100.00%
Bootstrap support for G1TZM7 as seed ortholog is 100%.
Bootstrap support for L0PAK9 as seed ortholog is 100%.

Group of orthologs #1069. Best score 121 bits
Score difference with first non-orthologous sequence - O.cuniculus:121 P.jiroveci:121

G1U0W2              	100.00%		L0PF16              	100.00%
Bootstrap support for G1U0W2 as seed ortholog is 100%.
Bootstrap support for L0PF16 as seed ortholog is 100%.

Group of orthologs #1070. Best score 120 bits
Score difference with first non-orthologous sequence - O.cuniculus:120 P.jiroveci:120

G1T6I3              	100.00%		L0P816              	100.00%
G1SLX7              	39.30%		
Bootstrap support for G1T6I3 as seed ortholog is 100%.
Bootstrap support for L0P816 as seed ortholog is 100%.

Group of orthologs #1071. Best score 119 bits
Score difference with first non-orthologous sequence - O.cuniculus:119 P.jiroveci:119

G1SDF1              	100.00%		L0PG04              	100.00%
G1SEC4              	48.18%		
Bootstrap support for G1SDF1 as seed ortholog is 100%.
Bootstrap support for L0PG04 as seed ortholog is 100%.

Group of orthologs #1072. Best score 119 bits
Score difference with first non-orthologous sequence - O.cuniculus:119 P.jiroveci:119

G1ST98              	100.00%		L0PGM7              	100.00%
                    	       		L0PGY6              	94.68%
Bootstrap support for G1ST98 as seed ortholog is 100%.
Bootstrap support for L0PGM7 as seed ortholog is 100%.

Group of orthologs #1073. Best score 119 bits
Score difference with first non-orthologous sequence - O.cuniculus:35 P.jiroveci:119

G1T946              	100.00%		L0PAX2              	100.00%
G1TUS6              	34.67%		
Bootstrap support for G1T946 as seed ortholog is 83%.
Bootstrap support for L0PAX2 as seed ortholog is 100%.

Group of orthologs #1074. Best score 119 bits
Score difference with first non-orthologous sequence - O.cuniculus:119 P.jiroveci:119

G1SL46              	100.00%		L0PC08              	100.00%
Bootstrap support for G1SL46 as seed ortholog is 100%.
Bootstrap support for L0PC08 as seed ortholog is 100%.

Group of orthologs #1075. Best score 119 bits
Score difference with first non-orthologous sequence - O.cuniculus:119 P.jiroveci:119

G1SP22              	100.00%		L0PC89              	100.00%
Bootstrap support for G1SP22 as seed ortholog is 100%.
Bootstrap support for L0PC89 as seed ortholog is 100%.

Group of orthologs #1076. Best score 119 bits
Score difference with first non-orthologous sequence - O.cuniculus:119 P.jiroveci:119

G1SXK5              	100.00%		L0PIR4              	100.00%
Bootstrap support for G1SXK5 as seed ortholog is 100%.
Bootstrap support for L0PIR4 as seed ortholog is 100%.

Group of orthologs #1077. Best score 119 bits
Score difference with first non-orthologous sequence - O.cuniculus:119 P.jiroveci:119

G1SZS6              	100.00%		L0PFV2              	100.00%
Bootstrap support for G1SZS6 as seed ortholog is 100%.
Bootstrap support for L0PFV2 as seed ortholog is 100%.

Group of orthologs #1078. Best score 118 bits
Score difference with first non-orthologous sequence - O.cuniculus:118 P.jiroveci:118

G1SDM0              	100.00%		L0PFZ8              	100.00%
G1T9R6              	75.94%		
G1SU29              	39.15%		
G1SXG7              	8.02%		
Bootstrap support for G1SDM0 as seed ortholog is 100%.
Bootstrap support for L0PFZ8 as seed ortholog is 100%.

Group of orthologs #1079. Best score 118 bits
Score difference with first non-orthologous sequence - O.cuniculus:118 P.jiroveci:118

G1T168              	100.00%		L0PD00              	100.00%
G1U0Y5              	100.00%		
G1U4C7              	80.63%		
Bootstrap support for G1T168 as seed ortholog is 100%.
Bootstrap support for G1U0Y5 as seed ortholog is 100%.
Bootstrap support for L0PD00 as seed ortholog is 100%.

Group of orthologs #1080. Best score 118 bits
Score difference with first non-orthologous sequence - O.cuniculus:118 P.jiroveci:118

G1TWC5              	100.00%		L0P9A7              	100.00%
G1T0L1              	86.21%		
Bootstrap support for G1TWC5 as seed ortholog is 100%.
Bootstrap support for L0P9A7 as seed ortholog is 100%.

Group of orthologs #1081. Best score 118 bits
Score difference with first non-orthologous sequence - O.cuniculus:47 P.jiroveci:118

B7NZF6              	100.00%		L0P9W5              	100.00%
Bootstrap support for B7NZF6 as seed ortholog is 84%.
Bootstrap support for L0P9W5 as seed ortholog is 100%.

Group of orthologs #1082. Best score 118 bits
Score difference with first non-orthologous sequence - O.cuniculus:118 P.jiroveci:118

G1SMG0              	100.00%		L0P7N9              	100.00%
Bootstrap support for G1SMG0 as seed ortholog is 100%.
Bootstrap support for L0P7N9 as seed ortholog is 100%.

Group of orthologs #1083. Best score 117 bits
Score difference with first non-orthologous sequence - O.cuniculus:117 P.jiroveci:117

G1U2E3              	100.00%		L0P990              	100.00%
G1SRU4              	52.32%		
G1SIL1              	45.51%		
Bootstrap support for G1U2E3 as seed ortholog is 100%.
Bootstrap support for L0P990 as seed ortholog is 100%.

Group of orthologs #1084. Best score 117 bits
Score difference with first non-orthologous sequence - O.cuniculus:117 P.jiroveci:63

G1TPK6              	100.00%		L0PA97              	100.00%
Bootstrap support for G1TPK6 as seed ortholog is 100%.
Bootstrap support for L0PA97 as seed ortholog is 99%.

Group of orthologs #1085. Best score 117 bits
Score difference with first non-orthologous sequence - O.cuniculus:117 P.jiroveci:117

G1TWW0              	100.00%		L0PD37              	100.00%
Bootstrap support for G1TWW0 as seed ortholog is 100%.
Bootstrap support for L0PD37 as seed ortholog is 100%.

Group of orthologs #1086. Best score 116 bits
Score difference with first non-orthologous sequence - O.cuniculus:32 P.jiroveci:116

G1U2T8              	100.00%		L0P9S9              	100.00%
G1SY81              	44.63%		L0PDT3              	44.69%
G1T1S5              	38.48%		
G1SU95              	31.60%		
G1SNC3              	29.30%		
G1TN88              	23.77%		
Bootstrap support for G1U2T8 as seed ortholog is 72%.
Alternative seed ortholog is G1SKK6 (32 bits away from this cluster)
Bootstrap support for L0P9S9 as seed ortholog is 100%.

Group of orthologs #1087. Best score 116 bits
Score difference with first non-orthologous sequence - O.cuniculus:116 P.jiroveci:116

G1SMZ9              	100.00%		L0PGB6              	100.00%
                    	       		L0PG66              	85.14%
Bootstrap support for G1SMZ9 as seed ortholog is 100%.
Bootstrap support for L0PGB6 as seed ortholog is 100%.

Group of orthologs #1088. Best score 116 bits
Score difference with first non-orthologous sequence - O.cuniculus:116 P.jiroveci:116

G1T5F0              	100.00%		L0PGF6              	100.00%
G1SWI9              	42.23%		
Bootstrap support for G1T5F0 as seed ortholog is 100%.
Bootstrap support for L0PGF6 as seed ortholog is 100%.

Group of orthologs #1089. Best score 116 bits
Score difference with first non-orthologous sequence - O.cuniculus:116 P.jiroveci:116

G1SSE2              	100.00%		L0PEI9              	100.00%
Bootstrap support for G1SSE2 as seed ortholog is 100%.
Bootstrap support for L0PEI9 as seed ortholog is 100%.

Group of orthologs #1090. Best score 115 bits
Score difference with first non-orthologous sequence - O.cuniculus:40 P.jiroveci:115

G1SFQ8              	100.00%		L0PD09              	100.00%
G1SS71              	14.94%		
G1U5M4              	14.51%		
G1SIY0              	11.95%		
G1T7J0              	11.85%		
G1TB69              	11.63%		
G1TCC1              	8.75%		
G1SHK4              	8.54%		
G1SH22              	8.54%		
G1T5U3              	6.19%		
Bootstrap support for G1SFQ8 as seed ortholog is 86%.
Bootstrap support for L0PD09 as seed ortholog is 100%.

Group of orthologs #1091. Best score 115 bits
Score difference with first non-orthologous sequence - O.cuniculus:115 P.jiroveci:115

G1SN77              	100.00%		L0P935              	100.00%
Bootstrap support for G1SN77 as seed ortholog is 100%.
Bootstrap support for L0P935 as seed ortholog is 100%.

Group of orthologs #1092. Best score 115 bits
Score difference with first non-orthologous sequence - O.cuniculus:115 P.jiroveci:115

G1T720              	100.00%		L0PHM1              	100.00%
Bootstrap support for G1T720 as seed ortholog is 100%.
Bootstrap support for L0PHM1 as seed ortholog is 100%.

Group of orthologs #1093. Best score 114 bits
Score difference with first non-orthologous sequence - O.cuniculus:114 P.jiroveci:114

G1SES2              	100.00%		L0PEW9              	100.00%
G1SYK9              	63.16%		
Bootstrap support for G1SES2 as seed ortholog is 100%.
Bootstrap support for L0PEW9 as seed ortholog is 100%.

Group of orthologs #1094. Best score 114 bits
Score difference with first non-orthologous sequence - O.cuniculus:114 P.jiroveci:114

B8K1C3              	100.00%		L0PCI9              	100.00%
Bootstrap support for B8K1C3 as seed ortholog is 100%.
Bootstrap support for L0PCI9 as seed ortholog is 100%.

Group of orthologs #1095. Best score 114 bits
Score difference with first non-orthologous sequence - O.cuniculus:23 P.jiroveci:114

G1SQA4              	100.00%		L0P984              	100.00%
Bootstrap support for G1SQA4 as seed ortholog is 75%.
Bootstrap support for L0P984 as seed ortholog is 100%.

Group of orthologs #1096. Best score 113 bits
Score difference with first non-orthologous sequence - O.cuniculus:113 P.jiroveci:113

G1SJL9              	100.00%		L0PA59              	100.00%
Bootstrap support for G1SJL9 as seed ortholog is 100%.
Bootstrap support for L0PA59 as seed ortholog is 100%.

Group of orthologs #1097. Best score 113 bits
Score difference with first non-orthologous sequence - O.cuniculus:2 P.jiroveci:113

G1SN16              	100.00%		L0PBX9              	100.00%
Bootstrap support for G1SN16 as seed ortholog is 68%.
Alternative seed ortholog is G1TSK9 (2 bits away from this cluster)
Bootstrap support for L0PBX9 as seed ortholog is 100%.

Group of orthologs #1098. Best score 113 bits
Score difference with first non-orthologous sequence - O.cuniculus:113 P.jiroveci:113

G1SSM6              	100.00%		L0PFW3              	100.00%
Bootstrap support for G1SSM6 as seed ortholog is 100%.
Bootstrap support for L0PFW3 as seed ortholog is 100%.

Group of orthologs #1099. Best score 112 bits
Score difference with first non-orthologous sequence - O.cuniculus:30 P.jiroveci:112

G1SY05              	100.00%		L0P8J9              	100.00%
G1TLL6              	39.85%		
Bootstrap support for G1SY05 as seed ortholog is 76%.
Bootstrap support for L0P8J9 as seed ortholog is 100%.

Group of orthologs #1100. Best score 112 bits
Score difference with first non-orthologous sequence - O.cuniculus:25 P.jiroveci:112

G1T9C0              	100.00%		L0PAF2              	100.00%
G1TCP5              	13.94%		
Bootstrap support for G1T9C0 as seed ortholog is 75%.
Bootstrap support for L0PAF2 as seed ortholog is 100%.

Group of orthologs #1101. Best score 112 bits
Score difference with first non-orthologous sequence - O.cuniculus:112 P.jiroveci:112

G1SH46              	100.00%		L0P8A3              	100.00%
Bootstrap support for G1SH46 as seed ortholog is 100%.
Bootstrap support for L0P8A3 as seed ortholog is 100%.

Group of orthologs #1102. Best score 112 bits
Score difference with first non-orthologous sequence - O.cuniculus:112 P.jiroveci:112

G1SW78              	100.00%		L0P997              	100.00%
Bootstrap support for G1SW78 as seed ortholog is 100%.
Bootstrap support for L0P997 as seed ortholog is 100%.

Group of orthologs #1103. Best score 112 bits
Score difference with first non-orthologous sequence - O.cuniculus:112 P.jiroveci:112

G1TIT3              	100.00%		L0PFF5              	100.00%
Bootstrap support for G1TIT3 as seed ortholog is 100%.
Bootstrap support for L0PFF5 as seed ortholog is 100%.

Group of orthologs #1104. Best score 112 bits
Score difference with first non-orthologous sequence - O.cuniculus:112 P.jiroveci:112

G1TPC3              	100.00%		L0PIQ9              	100.00%
Bootstrap support for G1TPC3 as seed ortholog is 100%.
Bootstrap support for L0PIQ9 as seed ortholog is 100%.

Group of orthologs #1105. Best score 111 bits
Score difference with first non-orthologous sequence - O.cuniculus:111 P.jiroveci:111

G1SGH2              	100.00%		L0P8T2              	100.00%
                    	       		L0PA19              	81.25%
Bootstrap support for G1SGH2 as seed ortholog is 100%.
Bootstrap support for L0P8T2 as seed ortholog is 100%.

Group of orthologs #1106. Best score 111 bits
Score difference with first non-orthologous sequence - O.cuniculus:111 P.jiroveci:111

G1U0R9              	100.00%		L0PDI3              	100.00%
G1TUC2              	59.64%		
Bootstrap support for G1U0R9 as seed ortholog is 100%.
Bootstrap support for L0PDI3 as seed ortholog is 100%.

Group of orthologs #1107. Best score 111 bits
Score difference with first non-orthologous sequence - O.cuniculus:111 P.jiroveci:111

G1SHQ7              	100.00%		L0PFF4              	100.00%
Bootstrap support for G1SHQ7 as seed ortholog is 100%.
Bootstrap support for L0PFF4 as seed ortholog is 100%.

Group of orthologs #1108. Best score 111 bits
Score difference with first non-orthologous sequence - O.cuniculus:111 P.jiroveci:111

G1SZ76              	100.00%		L0PCT7              	100.00%
Bootstrap support for G1SZ76 as seed ortholog is 100%.
Bootstrap support for L0PCT7 as seed ortholog is 100%.

Group of orthologs #1109. Best score 111 bits
Score difference with first non-orthologous sequence - O.cuniculus:111 P.jiroveci:111

G1U3J2              	100.00%		L0PFK4              	100.00%
Bootstrap support for G1U3J2 as seed ortholog is 100%.
Bootstrap support for L0PFK4 as seed ortholog is 100%.

Group of orthologs #1110. Best score 110 bits
Score difference with first non-orthologous sequence - O.cuniculus:49 P.jiroveci:41

G1SDM2              	100.00%		L0P982              	100.00%
G1SDM3              	100.00%		
G1U535              	29.52%		
G1T8Z1              	24.24%		
G1TI19              	16.29%		
G1SHQ1              	5.87%		
Bootstrap support for G1SDM2 as seed ortholog is 96%.
Bootstrap support for G1SDM3 as seed ortholog is 92%.
Bootstrap support for L0P982 as seed ortholog is 91%.

Group of orthologs #1111. Best score 110 bits
Score difference with first non-orthologous sequence - O.cuniculus:110 P.jiroveci:110

G1SMS4              	100.00%		L0PCC2              	100.00%
Bootstrap support for G1SMS4 as seed ortholog is 100%.
Bootstrap support for L0PCC2 as seed ortholog is 100%.

Group of orthologs #1112. Best score 110 bits
Score difference with first non-orthologous sequence - O.cuniculus:110 P.jiroveci:110

G1SVT3              	100.00%		L0PGR9              	100.00%
Bootstrap support for G1SVT3 as seed ortholog is 100%.
Bootstrap support for L0PGR9 as seed ortholog is 100%.

Group of orthologs #1113. Best score 110 bits
Score difference with first non-orthologous sequence - O.cuniculus:28 P.jiroveci:110

G1T7I1              	100.00%		L0PGC0              	100.00%
Bootstrap support for G1T7I1 as seed ortholog is 84%.
Bootstrap support for L0PGC0 as seed ortholog is 100%.

Group of orthologs #1114. Best score 109 bits
Score difference with first non-orthologous sequence - O.cuniculus:32 P.jiroveci:109

G1SIH5              	100.00%		L0P6Z0              	100.00%
G1T532              	21.09%		
G1TR23              	13.13%		
Bootstrap support for G1SIH5 as seed ortholog is 99%.
Bootstrap support for L0P6Z0 as seed ortholog is 100%.

Group of orthologs #1115. Best score 109 bits
Score difference with first non-orthologous sequence - O.cuniculus:109 P.jiroveci:109

G1T8F8              	100.00%		L0PCZ2              	100.00%
G1TFL6              	96.53%		
G1TSG1              	36.11%		
Bootstrap support for G1T8F8 as seed ortholog is 100%.
Bootstrap support for L0PCZ2 as seed ortholog is 100%.

Group of orthologs #1116. Best score 109 bits
Score difference with first non-orthologous sequence - O.cuniculus:109 P.jiroveci:109

G1T6S6              	100.00%		L0PFG4              	100.00%
G1T1E8              	79.69%		L0P939              	37.26%
Bootstrap support for G1T6S6 as seed ortholog is 100%.
Bootstrap support for L0PFG4 as seed ortholog is 100%.

Group of orthologs #1117. Best score 109 bits
Score difference with first non-orthologous sequence - O.cuniculus:109 P.jiroveci:109

G1TB44              	100.00%		L0P8L2              	100.00%
Bootstrap support for G1TB44 as seed ortholog is 100%.
Bootstrap support for L0P8L2 as seed ortholog is 100%.

Group of orthologs #1118. Best score 108 bits
Score difference with first non-orthologous sequence - O.cuniculus:108 P.jiroveci:108

P62943              	100.00%		L0PBU9              	100.00%
Q8HYX6              	74.36%		
G1SY51              	52.99%		
Bootstrap support for P62943 as seed ortholog is 100%.
Bootstrap support for L0PBU9 as seed ortholog is 100%.

Group of orthologs #1119. Best score 108 bits
Score difference with first non-orthologous sequence - O.cuniculus:108 P.jiroveci:108

G1SX03              	100.00%		L0PEE1              	100.00%
Bootstrap support for G1SX03 as seed ortholog is 100%.
Bootstrap support for L0PEE1 as seed ortholog is 100%.

Group of orthologs #1120. Best score 108 bits
Score difference with first non-orthologous sequence - O.cuniculus:108 P.jiroveci:108

G1TAQ4              	100.00%		L0PDW8              	100.00%
Bootstrap support for G1TAQ4 as seed ortholog is 100%.
Bootstrap support for L0PDW8 as seed ortholog is 100%.

Group of orthologs #1121. Best score 108 bits
Score difference with first non-orthologous sequence - O.cuniculus:108 P.jiroveci:108

G1TF72              	100.00%		L0PCT2              	100.00%
Bootstrap support for G1TF72 as seed ortholog is 100%.
Bootstrap support for L0PCT2 as seed ortholog is 100%.

Group of orthologs #1122. Best score 107 bits
Score difference with first non-orthologous sequence - O.cuniculus:12 P.jiroveci:107

G1SST7              	100.00%		L0PF58              	100.00%
G1T925              	34.44%		
Bootstrap support for G1SST7 as seed ortholog is 68%.
Alternative seed ortholog is G1TCG8 (12 bits away from this cluster)
Bootstrap support for L0PF58 as seed ortholog is 100%.

Group of orthologs #1123. Best score 107 bits
Score difference with first non-orthologous sequence - O.cuniculus:107 P.jiroveci:107

G1U442              	100.00%		L0PAK0              	100.00%
G1T928              	16.48%		
Bootstrap support for G1U442 as seed ortholog is 100%.
Bootstrap support for L0PAK0 as seed ortholog is 100%.

Group of orthologs #1124. Best score 107 bits
Score difference with first non-orthologous sequence - O.cuniculus:107 P.jiroveci:107

G1SRJ1              	100.00%		L0PFG8              	100.00%
Bootstrap support for G1SRJ1 as seed ortholog is 100%.
Bootstrap support for L0PFG8 as seed ortholog is 100%.

Group of orthologs #1125. Best score 106 bits
Score difference with first non-orthologous sequence - O.cuniculus:106 P.jiroveci:106

G1SPI2              	100.00%		L0PBA3              	100.00%
Bootstrap support for G1SPI2 as seed ortholog is 100%.
Bootstrap support for L0PBA3 as seed ortholog is 100%.

Group of orthologs #1126. Best score 106 bits
Score difference with first non-orthologous sequence - O.cuniculus:106 P.jiroveci:106

G1T0Z8              	100.00%		L0PB99              	100.00%
Bootstrap support for G1T0Z8 as seed ortholog is 100%.
Bootstrap support for L0PB99 as seed ortholog is 100%.

Group of orthologs #1127. Best score 106 bits
Score difference with first non-orthologous sequence - O.cuniculus:106 P.jiroveci:106

G1TEI2              	100.00%		L0PD86              	100.00%
Bootstrap support for G1TEI2 as seed ortholog is 100%.
Bootstrap support for L0PD86 as seed ortholog is 100%.

Group of orthologs #1128. Best score 106 bits
Score difference with first non-orthologous sequence - O.cuniculus:106 P.jiroveci:106

G1U487              	100.00%		L0P9E5              	100.00%
Bootstrap support for G1U487 as seed ortholog is 100%.
Bootstrap support for L0P9E5 as seed ortholog is 100%.

Group of orthologs #1129. Best score 105 bits
Score difference with first non-orthologous sequence - O.cuniculus:36 P.jiroveci:29

G1T7S0              	100.00%		L0PBE1              	100.00%
G1SDR2              	91.06%		
Q7M2V4              	33.74%		
G1TTZ0              	32.93%		
P02608              	30.89%		
Bootstrap support for G1T7S0 as seed ortholog is 97%.
Bootstrap support for L0PBE1 as seed ortholog is 92%.

Group of orthologs #1130. Best score 105 bits
Score difference with first non-orthologous sequence - O.cuniculus:105 P.jiroveci:105

G1SKP5              	100.00%		L0PGS9              	100.00%
Bootstrap support for G1SKP5 as seed ortholog is 100%.
Bootstrap support for L0PGS9 as seed ortholog is 100%.

Group of orthologs #1131. Best score 105 bits
Score difference with first non-orthologous sequence - O.cuniculus:105 P.jiroveci:105

G1SW38              	100.00%		L0PAM7              	100.00%
Bootstrap support for G1SW38 as seed ortholog is 100%.
Bootstrap support for L0PAM7 as seed ortholog is 100%.

Group of orthologs #1132. Best score 105 bits
Score difference with first non-orthologous sequence - O.cuniculus:105 P.jiroveci:105

G1U3S6              	100.00%		L0PD07              	100.00%
Bootstrap support for G1U3S6 as seed ortholog is 100%.
Bootstrap support for L0PD07 as seed ortholog is 100%.

Group of orthologs #1133. Best score 104 bits
Score difference with first non-orthologous sequence - O.cuniculus:20 P.jiroveci:104

G1TD31              	100.00%		L0PGL1              	100.00%
G1TLM7              	51.48%		
G1SY52              	49.45%		
G1SPY9              	48.52%		
G1SPZ4              	47.60%		
G1TRL7              	41.13%		
G1SH60              	6.65%		
G1TA53              	6.10%		
G1T4S6              	5.36%		
Bootstrap support for G1TD31 as seed ortholog is 75%.
Bootstrap support for L0PGL1 as seed ortholog is 100%.

Group of orthologs #1134. Best score 104 bits
Score difference with first non-orthologous sequence - O.cuniculus:104 P.jiroveci:104

G1SK11              	100.00%		L0P7T7              	100.00%
G1TSH5              	23.09%		
Bootstrap support for G1SK11 as seed ortholog is 100%.
Bootstrap support for L0P7T7 as seed ortholog is 100%.

Group of orthologs #1135. Best score 104 bits
Score difference with first non-orthologous sequence - O.cuniculus:104 P.jiroveci:104

G1TRJ2              	100.00%		L0PCI6              	100.00%
G1T7Y8              	88.81%		
Bootstrap support for G1TRJ2 as seed ortholog is 100%.
Bootstrap support for L0PCI6 as seed ortholog is 100%.

Group of orthologs #1136. Best score 104 bits
Score difference with first non-orthologous sequence - O.cuniculus:104 P.jiroveci:104

G1SHL9              	100.00%		L0PCV9              	100.00%
Bootstrap support for G1SHL9 as seed ortholog is 100%.
Bootstrap support for L0PCV9 as seed ortholog is 100%.

Group of orthologs #1137. Best score 104 bits
Score difference with first non-orthologous sequence - O.cuniculus:104 P.jiroveci:104

G1T8Z2              	100.00%		L0PBX3              	100.00%
Bootstrap support for G1T8Z2 as seed ortholog is 100%.
Bootstrap support for L0PBX3 as seed ortholog is 100%.

Group of orthologs #1138. Best score 104 bits
Score difference with first non-orthologous sequence - O.cuniculus:104 P.jiroveci:104

G1TBD1              	100.00%		L0PDM8              	100.00%
Bootstrap support for G1TBD1 as seed ortholog is 100%.
Bootstrap support for L0PDM8 as seed ortholog is 100%.

Group of orthologs #1139. Best score 103 bits
Score difference with first non-orthologous sequence - O.cuniculus:103 P.jiroveci:103

G1TAZ2              	100.00%		L0P8K4              	100.00%
G1TUB2              	90.53%		
Bootstrap support for G1TAZ2 as seed ortholog is 100%.
Bootstrap support for L0P8K4 as seed ortholog is 100%.

Group of orthologs #1140. Best score 103 bits
Score difference with first non-orthologous sequence - O.cuniculus:103 P.jiroveci:103

G1TT75              	100.00%		L0PEK0              	100.00%
G1TVG8              	29.53%		
Bootstrap support for G1TT75 as seed ortholog is 100%.
Bootstrap support for L0PEK0 as seed ortholog is 100%.

Group of orthologs #1141. Best score 103 bits
Score difference with first non-orthologous sequence - O.cuniculus:103 P.jiroveci:103

G1SRQ7              	100.00%		L0PH07              	100.00%
Bootstrap support for G1SRQ7 as seed ortholog is 100%.
Bootstrap support for L0PH07 as seed ortholog is 100%.

Group of orthologs #1142. Best score 103 bits
Score difference with first non-orthologous sequence - O.cuniculus:19 P.jiroveci:103

G1T662              	100.00%		L0PFE9              	100.00%
Bootstrap support for G1T662 as seed ortholog is 67%.
Alternative seed ortholog is G1SWM8 (19 bits away from this cluster)
Bootstrap support for L0PFE9 as seed ortholog is 100%.

Group of orthologs #1143. Best score 103 bits
Score difference with first non-orthologous sequence - O.cuniculus:103 P.jiroveci:103

G1TIB4              	100.00%		L0P8G4              	100.00%
Bootstrap support for G1TIB4 as seed ortholog is 100%.
Bootstrap support for L0P8G4 as seed ortholog is 100%.

Group of orthologs #1144. Best score 102 bits
Score difference with first non-orthologous sequence - O.cuniculus:102 P.jiroveci:102

G1SGK1              	100.00%		L0PDI9              	100.00%
G1SS34              	25.07%		
Bootstrap support for G1SGK1 as seed ortholog is 100%.
Bootstrap support for L0PDI9 as seed ortholog is 100%.

Group of orthologs #1145. Best score 102 bits
Score difference with first non-orthologous sequence - O.cuniculus:102 P.jiroveci:102

G1SYU5              	100.00%		L0PC19              	100.00%
G1SV73              	21.43%		
Bootstrap support for G1SYU5 as seed ortholog is 100%.
Bootstrap support for L0PC19 as seed ortholog is 100%.

Group of orthologs #1146. Best score 102 bits
Score difference with first non-orthologous sequence - O.cuniculus:102 P.jiroveci:102

G1TDG7              	100.00%		L0PCY4              	100.00%
Bootstrap support for G1TDG7 as seed ortholog is 100%.
Bootstrap support for L0PCY4 as seed ortholog is 100%.

Group of orthologs #1147. Best score 102 bits
Score difference with first non-orthologous sequence - O.cuniculus:102 P.jiroveci:102

G1TU73              	100.00%		L0PEZ6              	100.00%
Bootstrap support for G1TU73 as seed ortholog is 100%.
Bootstrap support for L0PEZ6 as seed ortholog is 100%.

Group of orthologs #1148. Best score 102 bits
Score difference with first non-orthologous sequence - O.cuniculus:102 P.jiroveci:102

O77682              	100.00%		L0PG56              	100.00%
Bootstrap support for O77682 as seed ortholog is 100%.
Bootstrap support for L0PG56 as seed ortholog is 100%.

Group of orthologs #1149. Best score 101 bits
Score difference with first non-orthologous sequence - O.cuniculus:101 P.jiroveci:101

G1TTQ5              	100.00%		L0P9F1              	100.00%
G1TBH2              	96.26%		
G1TYX8              	90.65%		
G1TQB0              	76.64%		
G1TNW9              	12.15%		
Bootstrap support for G1TTQ5 as seed ortholog is 100%.
Bootstrap support for L0P9F1 as seed ortholog is 100%.

Group of orthologs #1150. Best score 101 bits
Score difference with first non-orthologous sequence - O.cuniculus:31 P.jiroveci:101

G1SJZ9              	100.00%		L0P9W7              	100.00%
P08628              	100.00%		
G1TIC3              	43.97%		
Bootstrap support for G1SJZ9 as seed ortholog is 89%.
Bootstrap support for P08628 as seed ortholog is 92%.
Bootstrap support for L0P9W7 as seed ortholog is 100%.

Group of orthologs #1151. Best score 101 bits
Score difference with first non-orthologous sequence - O.cuniculus:101 P.jiroveci:101

G1TAL1              	100.00%		L0P9R5              	100.00%
G1TVU5              	96.59%		
Bootstrap support for G1TAL1 as seed ortholog is 100%.
Bootstrap support for L0P9R5 as seed ortholog is 100%.

Group of orthologs #1152. Best score 101 bits
Score difference with first non-orthologous sequence - O.cuniculus:101 P.jiroveci:101

G1SVU1              	100.00%		L0PGF4              	100.00%
Bootstrap support for G1SVU1 as seed ortholog is 100%.
Bootstrap support for L0PGF4 as seed ortholog is 100%.

Group of orthologs #1153. Best score 101 bits
Score difference with first non-orthologous sequence - O.cuniculus:101 P.jiroveci:101

G1T7J1              	100.00%		L0P7Q2              	100.00%
Bootstrap support for G1T7J1 as seed ortholog is 100%.
Bootstrap support for L0P7Q2 as seed ortholog is 100%.

Group of orthologs #1154. Best score 101 bits
Score difference with first non-orthologous sequence - O.cuniculus:101 P.jiroveci:101

G1TVC5              	100.00%		L0PE32              	100.00%
Bootstrap support for G1TVC5 as seed ortholog is 100%.
Bootstrap support for L0PE32 as seed ortholog is 100%.

Group of orthologs #1155. Best score 101 bits
Score difference with first non-orthologous sequence - O.cuniculus:48 P.jiroveci:101

Q28735              	100.00%		L0PE10              	100.00%
Bootstrap support for Q28735 as seed ortholog is 97%.
Bootstrap support for L0PE10 as seed ortholog is 100%.

Group of orthologs #1156. Best score 100 bits
Score difference with first non-orthologous sequence - O.cuniculus:100 P.jiroveci:100

G1SW10              	100.00%		L0PF90              	100.00%
G1T316              	49.76%		
G1T146              	49.28%		
Bootstrap support for G1SW10 as seed ortholog is 100%.
Bootstrap support for L0PF90 as seed ortholog is 100%.

Group of orthologs #1157. Best score 100 bits
Score difference with first non-orthologous sequence - O.cuniculus:100 P.jiroveci:100

G1T271              	100.00%		L0P8J6              	100.00%
G1U8B9              	88.44%		
Bootstrap support for G1T271 as seed ortholog is 100%.
Bootstrap support for L0P8J6 as seed ortholog is 100%.

Group of orthologs #1158. Best score 100 bits
Score difference with first non-orthologous sequence - O.cuniculus:100 P.jiroveci:100

G1SDV0              	100.00%		L0P8A1              	100.00%
Bootstrap support for G1SDV0 as seed ortholog is 100%.
Bootstrap support for L0P8A1 as seed ortholog is 100%.

Group of orthologs #1159. Best score 100 bits
Score difference with first non-orthologous sequence - O.cuniculus:100 P.jiroveci:100

G1SFQ3              	100.00%		L0PEA3              	100.00%
Bootstrap support for G1SFQ3 as seed ortholog is 100%.
Bootstrap support for L0PEA3 as seed ortholog is 100%.

Group of orthologs #1160. Best score 100 bits
Score difference with first non-orthologous sequence - O.cuniculus:48 P.jiroveci:100

G1T7M8              	100.00%		L0PBX0              	100.00%
Bootstrap support for G1T7M8 as seed ortholog is 91%.
Bootstrap support for L0PBX0 as seed ortholog is 100%.

Group of orthologs #1161. Best score 100 bits
Score difference with first non-orthologous sequence - O.cuniculus:100 P.jiroveci:100

G1TL80              	100.00%		L0PD96              	100.00%
Bootstrap support for G1TL80 as seed ortholog is 100%.
Bootstrap support for L0PD96 as seed ortholog is 100%.

Group of orthologs #1162. Best score 99 bits
Score difference with first non-orthologous sequence - O.cuniculus:99 P.jiroveci:99

G1TDF1              	100.00%		L0PBQ7              	100.00%
G1SXY5              	51.16%		
G1SYZ0              	43.79%		
G1TI38              	40.84%		
G1T798              	24.42%		
G1TKL6              	11.37%		
G1U750              	7.16%		
Bootstrap support for G1TDF1 as seed ortholog is 100%.
Bootstrap support for L0PBQ7 as seed ortholog is 100%.

Group of orthologs #1163. Best score 99 bits
Score difference with first non-orthologous sequence - O.cuniculus:99 P.jiroveci:99

G1U945              	100.00%		L0PCQ4              	100.00%
G1TU60              	96.71%		
G1TKS8              	86.84%		
G1TXG5              	78.29%		
Bootstrap support for G1U945 as seed ortholog is 100%.
Bootstrap support for L0PCQ4 as seed ortholog is 100%.

Group of orthologs #1164. Best score 99 bits
Score difference with first non-orthologous sequence - O.cuniculus:99 P.jiroveci:99

G1T1P9              	100.00%		L0PC01              	100.00%
G1TZN2              	100.00%		
G1T1P5              	12.33%		
Bootstrap support for G1T1P9 as seed ortholog is 100%.
Bootstrap support for G1TZN2 as seed ortholog is 100%.
Bootstrap support for L0PC01 as seed ortholog is 100%.

Group of orthologs #1165. Best score 99 bits
Score difference with first non-orthologous sequence - O.cuniculus:99 P.jiroveci:99

G1T8P4              	100.00%		L0P9H0              	100.00%
G1TGB1              	9.38%		
Bootstrap support for G1T8P4 as seed ortholog is 100%.
Bootstrap support for L0P9H0 as seed ortholog is 100%.

Group of orthologs #1166. Best score 99 bits
Score difference with first non-orthologous sequence - O.cuniculus:17 P.jiroveci:29

G1U9B4              	100.00%		L0PCM4              	100.00%
G1TZB9              	52.13%		
Bootstrap support for G1U9B4 as seed ortholog is 79%.
Bootstrap support for L0PCM4 as seed ortholog is 98%.

Group of orthologs #1167. Best score 99 bits
Score difference with first non-orthologous sequence - O.cuniculus:40 P.jiroveci:99

G1TA07              	100.00%		L0PE14              	100.00%
Bootstrap support for G1TA07 as seed ortholog is 99%.
Bootstrap support for L0PE14 as seed ortholog is 100%.

Group of orthologs #1168. Best score 99 bits
Score difference with first non-orthologous sequence - O.cuniculus:99 P.jiroveci:99

G1TXS0              	100.00%		L0PCX0              	100.00%
Bootstrap support for G1TXS0 as seed ortholog is 100%.
Bootstrap support for L0PCX0 as seed ortholog is 100%.

Group of orthologs #1169. Best score 98 bits
Score difference with first non-orthologous sequence - O.cuniculus:98 P.jiroveci:98

G1SY47              	100.00%		L0PHZ2              	100.00%
G1U1Z0              	51.63%		
Bootstrap support for G1SY47 as seed ortholog is 100%.
Bootstrap support for L0PHZ2 as seed ortholog is 100%.

Group of orthologs #1170. Best score 97 bits
Score difference with first non-orthologous sequence - O.cuniculus:97 P.jiroveci:97

G1U7Y8              	100.00%		L0PG13              	100.00%
G1SF08              	98.50%		
G1U062              	95.49%		
G1U2Z0              	93.98%		
G1U1G0              	92.48%		
G1U6I9              	89.47%		
G1U951              	76.69%		
Bootstrap support for G1U7Y8 as seed ortholog is 100%.
Bootstrap support for L0PG13 as seed ortholog is 100%.

Group of orthologs #1171. Best score 97 bits
Score difference with first non-orthologous sequence - O.cuniculus:97 P.jiroveci:97

G1SDC6              	100.00%		L0P9D3              	100.00%
                    	       		L0P7B2              	60.32%
Bootstrap support for G1SDC6 as seed ortholog is 100%.
Bootstrap support for L0P9D3 as seed ortholog is 100%.

Group of orthologs #1172. Best score 97 bits
Score difference with first non-orthologous sequence - O.cuniculus:97 P.jiroveci:97

G1SGM8              	100.00%		L0P7W8              	100.00%
                    	       		L0P8R2              	100.00%
Bootstrap support for G1SGM8 as seed ortholog is 100%.
Bootstrap support for L0P7W8 as seed ortholog is 100%.
Bootstrap support for L0P8R2 as seed ortholog is 100%.

Group of orthologs #1173. Best score 97 bits
Score difference with first non-orthologous sequence - O.cuniculus:97 P.jiroveci:97

G1SU79              	100.00%		L0PFB0              	100.00%
Bootstrap support for G1SU79 as seed ortholog is 100%.
Bootstrap support for L0PFB0 as seed ortholog is 100%.

Group of orthologs #1174. Best score 97 bits
Score difference with first non-orthologous sequence - O.cuniculus:97 P.jiroveci:97

G1T7P0              	100.00%		L0PBX4              	100.00%
Bootstrap support for G1T7P0 as seed ortholog is 100%.
Bootstrap support for L0PBX4 as seed ortholog is 100%.

Group of orthologs #1175. Best score 97 bits
Score difference with first non-orthologous sequence - O.cuniculus:97 P.jiroveci:97

G1U1Q0              	100.00%		L0PF05              	100.00%
Bootstrap support for G1U1Q0 as seed ortholog is 100%.
Bootstrap support for L0PF05 as seed ortholog is 100%.

Group of orthologs #1176. Best score 96 bits
Score difference with first non-orthologous sequence - O.cuniculus:10 P.jiroveci:44

G1T976              	100.00%		L0PHI9              	100.00%
G1SRU7              	38.57%		
G1T802              	27.66%		
G1T0Y7              	27.28%		
G1TBL9              	27.28%		
G1T2U4              	25.49%		
G1SHK5              	23.24%		
G1TS83              	22.95%		
G1T718              	21.07%		
G1SU44              	20.98%		
G1T7T9              	19.57%		
G1SMG3              	17.97%		
G1SYK1              	16.84%		
G1TLA2              	16.84%		
G1U9P9              	15.43%		
G1T768              	11.38%		
G1TNW3              	11.01%		
G1T334              	10.44%		
G1U751              	8.75%		
G1T7J4              	8.75%		
G1TCI0              	6.87%		
G1SNY6              	6.59%		
G1SH31              	5.55%		
Bootstrap support for G1T976 as seed ortholog is 65%.
Alternative seed ortholog is G1SU62 (10 bits away from this cluster)
Bootstrap support for L0PHI9 as seed ortholog is 96%.

Group of orthologs #1177. Best score 96 bits
Score difference with first non-orthologous sequence - O.cuniculus:4 P.jiroveci:96

G1TM59              	100.00%		L0PB42              	100.00%
G1TU65              	79.38%		
G1U7Y7              	79.38%		
G1SQP5              	76.29%		
G1TLD8              	69.07%		
G1TRW5              	65.98%		
Bootstrap support for G1TM59 as seed ortholog is 61%.
Alternative seed ortholog is G1TSW1 (4 bits away from this cluster)
Bootstrap support for L0PB42 as seed ortholog is 100%.

Group of orthologs #1178. Best score 96 bits
Score difference with first non-orthologous sequence - O.cuniculus:96 P.jiroveci:96

G1THU2              	100.00%		L0P8Q8              	100.00%
G1T3Z2              	35.75%		
G1SVV5              	8.32%		
G1TFL0              	8.32%		
Bootstrap support for G1THU2 as seed ortholog is 100%.
Bootstrap support for L0P8Q8 as seed ortholog is 100%.

Group of orthologs #1179. Best score 96 bits
Score difference with first non-orthologous sequence - O.cuniculus:96 P.jiroveci:96

G1SIA9              	100.00%		L0PI42              	100.00%
G1TKC7              	52.46%		
Bootstrap support for G1SIA9 as seed ortholog is 100%.
Bootstrap support for L0PI42 as seed ortholog is 100%.

Group of orthologs #1180. Best score 96 bits
Score difference with first non-orthologous sequence - O.cuniculus:96 P.jiroveci:96

G1SXX1              	100.00%		L0PF89              	100.00%
G1SLQ0              	30.56%		
Bootstrap support for G1SXX1 as seed ortholog is 100%.
Bootstrap support for L0PF89 as seed ortholog is 100%.

Group of orthologs #1181. Best score 96 bits
Score difference with first non-orthologous sequence - O.cuniculus:96 P.jiroveci:96

G1TPR2              	100.00%		L0PCF7              	100.00%
G1STY8              	98.23%		
Bootstrap support for G1TPR2 as seed ortholog is 100%.
Bootstrap support for L0PCF7 as seed ortholog is 100%.

Group of orthologs #1182. Best score 96 bits
Score difference with first non-orthologous sequence - O.cuniculus:42 P.jiroveci:96

G1T096              	100.00%		L0PFA1              	100.00%
Bootstrap support for G1T096 as seed ortholog is 99%.
Bootstrap support for L0PFA1 as seed ortholog is 100%.

Group of orthologs #1183. Best score 96 bits
Score difference with first non-orthologous sequence - O.cuniculus:96 P.jiroveci:96

G1T6N7              	100.00%		L0PBZ3              	100.00%
Bootstrap support for G1T6N7 as seed ortholog is 100%.
Bootstrap support for L0PBZ3 as seed ortholog is 100%.

Group of orthologs #1184. Best score 96 bits
Score difference with first non-orthologous sequence - O.cuniculus:96 P.jiroveci:96

G1T3X2              	100.00%		L0PEX4              	100.00%
Bootstrap support for G1T3X2 as seed ortholog is 100%.
Bootstrap support for L0PEX4 as seed ortholog is 100%.

Group of orthologs #1185. Best score 95 bits
Score difference with first non-orthologous sequence - O.cuniculus:95 P.jiroveci:95

G1STN6              	100.00%		L0PHH5              	100.00%
G1TIP6              	84.29%		
P00169              	16.67%		
G1TUH3              	12.38%		
Bootstrap support for G1STN6 as seed ortholog is 100%.
Bootstrap support for L0PHH5 as seed ortholog is 100%.

Group of orthologs #1186. Best score 95 bits
Score difference with first non-orthologous sequence - O.cuniculus:48 P.jiroveci:95

G1T7J9              	100.00%		L0P9D5              	100.00%
Bootstrap support for G1T7J9 as seed ortholog is 89%.
Bootstrap support for L0P9D5 as seed ortholog is 100%.

Group of orthologs #1187. Best score 94 bits
Score difference with first non-orthologous sequence - O.cuniculus:94 P.jiroveci:94

G1SIB0              	100.00%		L0PDY4              	100.00%
G1U6U8              	43.20%		
G1TZ89              	9.27%		
Bootstrap support for G1SIB0 as seed ortholog is 100%.
Bootstrap support for L0PDY4 as seed ortholog is 100%.

Group of orthologs #1188. Best score 94 bits
Score difference with first non-orthologous sequence - O.cuniculus:47 P.jiroveci:94

G1SLP3              	100.00%		L0PBX5              	100.00%
G1U223              	29.45%		
G1TFE3              	28.87%		
Bootstrap support for G1SLP3 as seed ortholog is 98%.
Bootstrap support for L0PBX5 as seed ortholog is 100%.

Group of orthologs #1189. Best score 94 bits
Score difference with first non-orthologous sequence - O.cuniculus:94 P.jiroveci:34

G1T0V4              	100.00%		L0PCQ5              	100.00%
G1TXZ2              	95.00%		
Bootstrap support for G1T0V4 as seed ortholog is 100%.
Bootstrap support for L0PCQ5 as seed ortholog is 99%.

Group of orthologs #1190. Best score 94 bits
Score difference with first non-orthologous sequence - O.cuniculus:94 P.jiroveci:94

G1TBQ6              	100.00%		L0P8Y9              	100.00%
G1SVI9              	44.08%		
Bootstrap support for G1TBQ6 as seed ortholog is 100%.
Bootstrap support for L0P8Y9 as seed ortholog is 100%.

Group of orthologs #1191. Best score 94 bits
Score difference with first non-orthologous sequence - O.cuniculus:94 P.jiroveci:94

G1SGN1              	100.00%		L0PB06              	100.00%
Bootstrap support for G1SGN1 as seed ortholog is 100%.
Bootstrap support for L0PB06 as seed ortholog is 100%.

Group of orthologs #1192. Best score 94 bits
Score difference with first non-orthologous sequence - O.cuniculus:1 P.jiroveci:7

G1SSC0              	100.00%		L0PGL7              	100.00%
Bootstrap support for G1SSC0 as seed ortholog is 50%.
Alternative seed ortholog is G1U3R3 (1 bits away from this cluster)
Bootstrap support for L0PGL7 as seed ortholog is 66%.
Alternative seed ortholog is L0P9H7 (7 bits away from this cluster)

Group of orthologs #1193. Best score 94 bits
Score difference with first non-orthologous sequence - O.cuniculus:94 P.jiroveci:94

G1TJA1              	100.00%		L0P8Z4              	100.00%
Bootstrap support for G1TJA1 as seed ortholog is 100%.
Bootstrap support for L0P8Z4 as seed ortholog is 100%.

Group of orthologs #1194. Best score 94 bits
Score difference with first non-orthologous sequence - O.cuniculus:94 P.jiroveci:94

G1TSW7              	100.00%		L0PF82              	100.00%
Bootstrap support for G1TSW7 as seed ortholog is 100%.
Bootstrap support for L0PF82 as seed ortholog is 100%.

Group of orthologs #1195. Best score 93 bits
Score difference with first non-orthologous sequence - O.cuniculus:93 P.jiroveci:93

G1SIX2              	100.00%		L0PF35              	100.00%
Bootstrap support for G1SIX2 as seed ortholog is 100%.
Bootstrap support for L0PF35 as seed ortholog is 100%.

Group of orthologs #1196. Best score 93 bits
Score difference with first non-orthologous sequence - O.cuniculus:93 P.jiroveci:93

G1TX03              	100.00%		L0PD45              	100.00%
Bootstrap support for G1TX03 as seed ortholog is 100%.
Bootstrap support for L0PD45 as seed ortholog is 100%.

Group of orthologs #1197. Best score 92 bits
Score difference with first non-orthologous sequence - O.cuniculus:92 P.jiroveci:30

G1SSP4              	100.00%		L0PB92              	100.00%
G1TS38              	38.61%		
Bootstrap support for G1SSP4 as seed ortholog is 100%.
Bootstrap support for L0PB92 as seed ortholog is 85%.

Group of orthologs #1198. Best score 92 bits
Score difference with first non-orthologous sequence - O.cuniculus:18 P.jiroveci:92

Q8WN94              	100.00%		L0PFM9              	100.00%
G1TBP0              	15.12%		
Bootstrap support for Q8WN94 as seed ortholog is 88%.
Bootstrap support for L0PFM9 as seed ortholog is 100%.

Group of orthologs #1199. Best score 92 bits
Score difference with first non-orthologous sequence - O.cuniculus:92 P.jiroveci:92

G1SEW6              	100.00%		L0PEI6              	100.00%
Bootstrap support for G1SEW6 as seed ortholog is 100%.
Bootstrap support for L0PEI6 as seed ortholog is 100%.

Group of orthologs #1200. Best score 92 bits
Score difference with first non-orthologous sequence - O.cuniculus:92 P.jiroveci:92

G1SG29              	100.00%		L0PDQ8              	100.00%
Bootstrap support for G1SG29 as seed ortholog is 100%.
Bootstrap support for L0PDQ8 as seed ortholog is 100%.

Group of orthologs #1201. Best score 92 bits
Score difference with first non-orthologous sequence - O.cuniculus:92 P.jiroveci:92

G1T1I3              	100.00%		L0PD23              	100.00%
Bootstrap support for G1T1I3 as seed ortholog is 100%.
Bootstrap support for L0PD23 as seed ortholog is 100%.

Group of orthologs #1202. Best score 92 bits
Score difference with first non-orthologous sequence - O.cuniculus:92 P.jiroveci:92

G1T304              	100.00%		L0PCX7              	100.00%
Bootstrap support for G1T304 as seed ortholog is 100%.
Bootstrap support for L0PCX7 as seed ortholog is 100%.

Group of orthologs #1203. Best score 92 bits
Score difference with first non-orthologous sequence - O.cuniculus:92 P.jiroveci:92

G1TAD0              	100.00%		L0P995              	100.00%
Bootstrap support for G1TAD0 as seed ortholog is 100%.
Bootstrap support for L0P995 as seed ortholog is 100%.

Group of orthologs #1204. Best score 92 bits
Score difference with first non-orthologous sequence - O.cuniculus:20 P.jiroveci:92

G1TIV8              	100.00%		L0PAT3              	100.00%
Bootstrap support for G1TIV8 as seed ortholog is 89%.
Bootstrap support for L0PAT3 as seed ortholog is 100%.

Group of orthologs #1205. Best score 91 bits
Score difference with first non-orthologous sequence - O.cuniculus:91 P.jiroveci:91

G1SD37              	100.00%		L0P847              	100.00%
G1SJP2              	55.53%		
Bootstrap support for G1SD37 as seed ortholog is 100%.
Bootstrap support for L0P847 as seed ortholog is 100%.

Group of orthologs #1206. Best score 91 bits
Score difference with first non-orthologous sequence - O.cuniculus:91 P.jiroveci:91

G1SFY1              	100.00%		L0PFK1              	100.00%
G1U475              	8.82%		
Bootstrap support for G1SFY1 as seed ortholog is 100%.
Bootstrap support for L0PFK1 as seed ortholog is 100%.

Group of orthologs #1207. Best score 91 bits
Score difference with first non-orthologous sequence - O.cuniculus:91 P.jiroveci:91

G1SIB1              	100.00%		L0PEF9              	100.00%
                    	       		L0PG49              	100.00%
Bootstrap support for G1SIB1 as seed ortholog is 100%.
Bootstrap support for L0PEF9 as seed ortholog is 100%.
Bootstrap support for L0PG49 as seed ortholog is 100%.

Group of orthologs #1208. Best score 91 bits
Score difference with first non-orthologous sequence - O.cuniculus:91 P.jiroveci:91

G1SUK5              	100.00%		L0PFT3              	100.00%
G1TM26              	69.78%		
Bootstrap support for G1SUK5 as seed ortholog is 100%.
Bootstrap support for L0PFT3 as seed ortholog is 100%.

Group of orthologs #1209. Best score 91 bits
Score difference with first non-orthologous sequence - O.cuniculus:2 P.jiroveci:21

G1SPJ1              	100.00%		L0P9F8              	100.00%
Bootstrap support for G1SPJ1 as seed ortholog is 85%.
Bootstrap support for L0P9F8 as seed ortholog is 70%.
Alternative seed ortholog is L0PF67 (21 bits away from this cluster)

Group of orthologs #1210. Best score 91 bits
Score difference with first non-orthologous sequence - O.cuniculus:91 P.jiroveci:91

G1U039              	100.00%		L0PCM3              	100.00%
Bootstrap support for G1U039 as seed ortholog is 100%.
Bootstrap support for L0PCM3 as seed ortholog is 100%.

Group of orthologs #1211. Best score 91 bits
Score difference with first non-orthologous sequence - O.cuniculus:91 P.jiroveci:91

G1U8A9              	100.00%		L0PEL9              	100.00%
Bootstrap support for G1U8A9 as seed ortholog is 100%.
Bootstrap support for L0PEL9 as seed ortholog is 100%.

Group of orthologs #1212. Best score 90 bits
Score difference with first non-orthologous sequence - O.cuniculus:90 P.jiroveci:90

G1T4D0              	100.00%		L0PDD4              	100.00%
G1TXW1              	79.41%		
G1TB47              	53.92%		
Bootstrap support for G1T4D0 as seed ortholog is 100%.
Bootstrap support for L0PDD4 as seed ortholog is 100%.

Group of orthologs #1213. Best score 90 bits
Score difference with first non-orthologous sequence - O.cuniculus:90 P.jiroveci:90

G1SRS6              	100.00%		L0PEX2              	100.00%
G1SJD6              	39.66%		
Bootstrap support for G1SRS6 as seed ortholog is 100%.
Bootstrap support for L0PEX2 as seed ortholog is 100%.

Group of orthologs #1214. Best score 90 bits
Score difference with first non-orthologous sequence - O.cuniculus:90 P.jiroveci:90

G1SHF1              	100.00%		L0P9A5              	100.00%
Bootstrap support for G1SHF1 as seed ortholog is 100%.
Bootstrap support for L0P9A5 as seed ortholog is 100%.

Group of orthologs #1215. Best score 90 bits
Score difference with first non-orthologous sequence - O.cuniculus:90 P.jiroveci:90

G1SD45              	100.00%		L0PDE2              	100.00%
Bootstrap support for G1SD45 as seed ortholog is 100%.
Bootstrap support for L0PDE2 as seed ortholog is 100%.

Group of orthologs #1216. Best score 90 bits
Score difference with first non-orthologous sequence - O.cuniculus:90 P.jiroveci:90

G1T8N8              	100.00%		L0PII9              	100.00%
Bootstrap support for G1T8N8 as seed ortholog is 100%.
Bootstrap support for L0PII9 as seed ortholog is 100%.

Group of orthologs #1217. Best score 89 bits
Score difference with first non-orthologous sequence - O.cuniculus:89 P.jiroveci:89

G1TRW6              	100.00%		L0PBR1              	100.00%
G1TXW0              	88.46%		
G1TLI9              	85.90%		
G1TIS9              	85.90%		
Bootstrap support for G1TRW6 as seed ortholog is 100%.
Bootstrap support for L0PBR1 as seed ortholog is 100%.

Group of orthologs #1218. Best score 89 bits
Score difference with first non-orthologous sequence - O.cuniculus:89 P.jiroveci:89

G1SW47              	100.00%		L0PA80              	100.00%
G1STT4              	48.67%		
Bootstrap support for G1SW47 as seed ortholog is 100%.
Bootstrap support for L0PA80 as seed ortholog is 100%.

Group of orthologs #1219. Best score 89 bits
Score difference with first non-orthologous sequence - O.cuniculus:9 P.jiroveci:29

G1U1H2              	100.00%		L0PFT5              	100.00%
G1TES1              	65.78%		
Bootstrap support for G1U1H2 as seed ortholog is 94%.
Bootstrap support for L0PFT5 as seed ortholog is 84%.

Group of orthologs #1220. Best score 88 bits
Score difference with first non-orthologous sequence - O.cuniculus:88 P.jiroveci:88

G1SDS4              	100.00%		L0PCD9              	100.00%
G1T4U9              	10.23%		
Bootstrap support for G1SDS4 as seed ortholog is 100%.
Bootstrap support for L0PCD9 as seed ortholog is 100%.

Group of orthologs #1221. Best score 88 bits
Score difference with first non-orthologous sequence - O.cuniculus:88 P.jiroveci:88

G1U1D6              	100.00%		L0P929              	100.00%
G1SWY3              	47.87%		
Bootstrap support for G1U1D6 as seed ortholog is 100%.
Bootstrap support for L0P929 as seed ortholog is 100%.

Group of orthologs #1222. Best score 88 bits
Score difference with first non-orthologous sequence - O.cuniculus:88 P.jiroveci:17

G1TG48              	100.00%		L0PAT8              	100.00%
Bootstrap support for G1TG48 as seed ortholog is 100%.
Bootstrap support for L0PAT8 as seed ortholog is 71%.
Alternative seed ortholog is L0PEV0 (17 bits away from this cluster)

Group of orthologs #1223. Best score 88 bits
Score difference with first non-orthologous sequence - O.cuniculus:88 P.jiroveci:88

G1TP99              	100.00%		L0PAZ1              	100.00%
Bootstrap support for G1TP99 as seed ortholog is 100%.
Bootstrap support for L0PAZ1 as seed ortholog is 100%.

Group of orthologs #1224. Best score 87 bits
Score difference with first non-orthologous sequence - O.cuniculus:87 P.jiroveci:87

G1U147              	100.00%		L0P7G9              	100.00%
G1TG04              	65.05%		
G1SKF7              	65.05%		
G1U1N5              	65.05%		
G1TSW0              	63.79%		
G1U375              	63.37%		
G1TXK1              	62.11%		
G1TF89              	60.84%		
G1U554              	58.53%		
G1TNN3              	50.74%		
Bootstrap support for G1U147 as seed ortholog is 100%.
Bootstrap support for L0P7G9 as seed ortholog is 100%.

Group of orthologs #1225. Best score 87 bits
Score difference with first non-orthologous sequence - O.cuniculus:87 P.jiroveci:87

G1TW56              	100.00%		L0PBW0              	100.00%
G1TFJ5              	78.00%		L0PAA9              	7.39%
G1SLL4              	72.00%		
G1TCI3              	33.17%		
Bootstrap support for G1TW56 as seed ortholog is 100%.
Bootstrap support for L0PBW0 as seed ortholog is 100%.

Group of orthologs #1226. Best score 87 bits
Score difference with first non-orthologous sequence - O.cuniculus:45 P.jiroveci:87

G1SPB7              	100.00%		L0PFU9              	100.00%
G1TSN5              	61.87%		
G1TYL3              	57.19%		
Bootstrap support for G1SPB7 as seed ortholog is 94%.
Bootstrap support for L0PFU9 as seed ortholog is 100%.

Group of orthologs #1227. Best score 87 bits
Score difference with first non-orthologous sequence - O.cuniculus:37 P.jiroveci:87

G1SIC4              	100.00%		L0PD56              	100.00%
G1T9L8              	29.87%		
Bootstrap support for G1SIC4 as seed ortholog is 83%.
Bootstrap support for L0PD56 as seed ortholog is 100%.

Group of orthologs #1228. Best score 87 bits
Score difference with first non-orthologous sequence - O.cuniculus:87 P.jiroveci:87

G1SUG7              	100.00%		L0PG18              	100.00%
G1SJR2              	61.10%		
Bootstrap support for G1SUG7 as seed ortholog is 100%.
Bootstrap support for L0PG18 as seed ortholog is 100%.

Group of orthologs #1229. Best score 87 bits
Score difference with first non-orthologous sequence - O.cuniculus:87 P.jiroveci:87

G1TDB3              	100.00%		L0PEF7              	100.00%
G1TQS1              	43.56%		
Bootstrap support for G1TDB3 as seed ortholog is 100%.
Bootstrap support for L0PEF7 as seed ortholog is 100%.

Group of orthologs #1230. Best score 87 bits
Score difference with first non-orthologous sequence - O.cuniculus:87 P.jiroveci:87

G1SD54              	100.00%		L0PA96              	100.00%
Bootstrap support for G1SD54 as seed ortholog is 100%.
Bootstrap support for L0PA96 as seed ortholog is 100%.

Group of orthologs #1231. Best score 87 bits
Score difference with first non-orthologous sequence - O.cuniculus:87 P.jiroveci:87

G1T0Y9              	100.00%		L0PFF2              	100.00%
Bootstrap support for G1T0Y9 as seed ortholog is 100%.
Bootstrap support for L0PFF2 as seed ortholog is 100%.

Group of orthologs #1232. Best score 87 bits
Score difference with first non-orthologous sequence - O.cuniculus:87 P.jiroveci:87

G1T5H9              	100.00%		L0PHU9              	100.00%
Bootstrap support for G1T5H9 as seed ortholog is 100%.
Bootstrap support for L0PHU9 as seed ortholog is 100%.

Group of orthologs #1233. Best score 86 bits
Score difference with first non-orthologous sequence - O.cuniculus:24 P.jiroveci:86

G1U0J6              	100.00%		L0PCN8              	100.00%
G1SKI0              	48.71%		
G1SNS8              	42.82%		
G1U8X1              	32.90%		
G1T468              	32.47%		
Bootstrap support for G1U0J6 as seed ortholog is 76%.
Bootstrap support for L0PCN8 as seed ortholog is 100%.

Group of orthologs #1234. Best score 86 bits
Score difference with first non-orthologous sequence - O.cuniculus:27 P.jiroveci:86

G1SDG9              	100.00%		L0P8W8              	100.00%
                    	       		L0P9K5              	56.02%
Bootstrap support for G1SDG9 as seed ortholog is 83%.
Bootstrap support for L0P8W8 as seed ortholog is 100%.

Group of orthologs #1235. Best score 86 bits
Score difference with first non-orthologous sequence - O.cuniculus:86 P.jiroveci:86

G1SUK0              	100.00%		L0PBC9              	100.00%
G1T2Y6              	63.24%		
Bootstrap support for G1SUK0 as seed ortholog is 100%.
Bootstrap support for L0PBC9 as seed ortholog is 100%.

Group of orthologs #1236. Best score 86 bits
Score difference with first non-orthologous sequence - O.cuniculus:86 P.jiroveci:86

G1TAS9              	100.00%		L0PDG4              	100.00%
G1TAV8              	97.84%		
Bootstrap support for G1TAS9 as seed ortholog is 100%.
Bootstrap support for L0PDG4 as seed ortholog is 100%.

Group of orthologs #1237. Best score 86 bits
Score difference with first non-orthologous sequence - O.cuniculus:23 P.jiroveci:86

G1SJR4              	100.00%		L0PDF0              	100.00%
Bootstrap support for G1SJR4 as seed ortholog is 77%.
Bootstrap support for L0PDF0 as seed ortholog is 100%.

Group of orthologs #1238. Best score 86 bits
Score difference with first non-orthologous sequence - O.cuniculus:10 P.jiroveci:86

G1SLQ6              	100.00%		L0PED1              	100.00%
Bootstrap support for G1SLQ6 as seed ortholog is 66%.
Alternative seed ortholog is G1SWU2 (10 bits away from this cluster)
Bootstrap support for L0PED1 as seed ortholog is 100%.

Group of orthologs #1239. Best score 86 bits
Score difference with first non-orthologous sequence - O.cuniculus:86 P.jiroveci:86

G1SU32              	100.00%		L0P9X3              	100.00%
Bootstrap support for G1SU32 as seed ortholog is 100%.
Bootstrap support for L0P9X3 as seed ortholog is 100%.

Group of orthologs #1240. Best score 86 bits
Score difference with first non-orthologous sequence - O.cuniculus:86 P.jiroveci:42

G1TDD2              	100.00%		L0P9G4              	100.00%
Bootstrap support for G1TDD2 as seed ortholog is 100%.
Bootstrap support for L0P9G4 as seed ortholog is 87%.

Group of orthologs #1241. Best score 86 bits
Score difference with first non-orthologous sequence - O.cuniculus:86 P.jiroveci:86

G1TSS6              	100.00%		L0PEF8              	100.00%
Bootstrap support for G1TSS6 as seed ortholog is 100%.
Bootstrap support for L0PEF8 as seed ortholog is 100%.

Group of orthologs #1242. Best score 85 bits
Score difference with first non-orthologous sequence - O.cuniculus:85 P.jiroveci:85

G1SKC3              	100.00%		L0PBG5              	100.00%
G1T430              	19.94%		
Bootstrap support for G1SKC3 as seed ortholog is 100%.
Bootstrap support for L0PBG5 as seed ortholog is 100%.

Group of orthologs #1243. Best score 85 bits
Score difference with first non-orthologous sequence - O.cuniculus:85 P.jiroveci:85

G1SL51              	100.00%		L0PE40              	100.00%
G1TWV6              	48.56%		
Bootstrap support for G1SL51 as seed ortholog is 100%.
Bootstrap support for L0PE40 as seed ortholog is 100%.

Group of orthologs #1244. Best score 85 bits
Score difference with first non-orthologous sequence - O.cuniculus:85 P.jiroveci:85

G1T1E5              	100.00%		L0PAW3              	100.00%
Bootstrap support for G1T1E5 as seed ortholog is 100%.
Bootstrap support for L0PAW3 as seed ortholog is 100%.

Group of orthologs #1245. Best score 85 bits
Score difference with first non-orthologous sequence - O.cuniculus:85 P.jiroveci:85

G1T4L8              	100.00%		L0PD30              	100.00%
Bootstrap support for G1T4L8 as seed ortholog is 100%.
Bootstrap support for L0PD30 as seed ortholog is 100%.

Group of orthologs #1246. Best score 85 bits
Score difference with first non-orthologous sequence - O.cuniculus:85 P.jiroveci:85

G1TNW8              	100.00%		L0P8J7              	100.00%
Bootstrap support for G1TNW8 as seed ortholog is 100%.
Bootstrap support for L0P8J7 as seed ortholog is 100%.

Group of orthologs #1247. Best score 84 bits
Score difference with first non-orthologous sequence - O.cuniculus:84 P.jiroveci:84

G1SF68              	100.00%		L0PEV7              	100.00%
G1SF15              	55.15%		
Bootstrap support for G1SF68 as seed ortholog is 100%.
Bootstrap support for L0PEV7 as seed ortholog is 100%.

Group of orthologs #1248. Best score 84 bits
Score difference with first non-orthologous sequence - O.cuniculus:84 P.jiroveci:84

G1SVZ0              	100.00%		L0PGS0              	100.00%
G1SJK8              	36.94%		
Bootstrap support for G1SVZ0 as seed ortholog is 100%.
Bootstrap support for L0PGS0 as seed ortholog is 100%.

Group of orthologs #1249. Best score 84 bits
Score difference with first non-orthologous sequence - O.cuniculus:84 P.jiroveci:84

G1SFW0              	100.00%		L0PDN3              	100.00%
Bootstrap support for G1SFW0 as seed ortholog is 100%.
Bootstrap support for L0PDN3 as seed ortholog is 100%.

Group of orthologs #1250. Best score 84 bits
Score difference with first non-orthologous sequence - O.cuniculus:84 P.jiroveci:84

G1T7C5              	100.00%		L0PF93              	100.00%
Bootstrap support for G1T7C5 as seed ortholog is 100%.
Bootstrap support for L0PF93 as seed ortholog is 100%.

Group of orthologs #1251. Best score 83 bits
Score difference with first non-orthologous sequence - O.cuniculus:16 P.jiroveci:83

G1T217              	100.00%		L0PE88              	100.00%
G1TNJ2              	19.80%		
G1SRZ5              	14.56%		
G1U6K8              	8.59%		
G1T078              	5.68%		
Bootstrap support for G1T217 as seed ortholog is 65%.
Alternative seed ortholog is Q09YN8 (16 bits away from this cluster)
Bootstrap support for L0PE88 as seed ortholog is 100%.

Group of orthologs #1252. Best score 83 bits
Score difference with first non-orthologous sequence - O.cuniculus:83 P.jiroveci:83

G1T149              	100.00%		L0PBP6              	100.00%
                    	       		L0PHL6              	91.49%
Bootstrap support for G1T149 as seed ortholog is 100%.
Bootstrap support for L0PBP6 as seed ortholog is 100%.

Group of orthologs #1253. Best score 83 bits
Score difference with first non-orthologous sequence - O.cuniculus:83 P.jiroveci:83

G1SI14              	100.00%		L0PFN0              	100.00%
Bootstrap support for G1SI14 as seed ortholog is 100%.
Bootstrap support for L0PFN0 as seed ortholog is 100%.

Group of orthologs #1254. Best score 82 bits
Score difference with first non-orthologous sequence - O.cuniculus:82 P.jiroveci:82

G1T7P7              	100.00%		L0PBD3              	100.00%
G1TYJ7              	100.00%		L0PCE5              	100.00%
G1T1W4              	47.15%		
Bootstrap support for G1T7P7 as seed ortholog is 100%.
Bootstrap support for G1TYJ7 as seed ortholog is 100%.
Bootstrap support for L0PBD3 as seed ortholog is 100%.
Bootstrap support for L0PCE5 as seed ortholog is 100%.

Group of orthologs #1255. Best score 82 bits
Score difference with first non-orthologous sequence - O.cuniculus:82 P.jiroveci:82

G1T5I9              	100.00%		L0PB51              	100.00%
G1TQC7              	27.54%		
Bootstrap support for G1T5I9 as seed ortholog is 100%.
Bootstrap support for L0PB51 as seed ortholog is 100%.

Group of orthologs #1256. Best score 82 bits
Score difference with first non-orthologous sequence - O.cuniculus:82 P.jiroveci:82

G1TDK6              	100.00%		L0PDW2              	100.00%
G1TDK1              	33.17%		
Bootstrap support for G1TDK6 as seed ortholog is 100%.
Bootstrap support for L0PDW2 as seed ortholog is 100%.

Group of orthologs #1257. Best score 82 bits
Score difference with first non-orthologous sequence - O.cuniculus:82 P.jiroveci:82

G1SUH5              	100.00%		L0PFL2              	100.00%
Bootstrap support for G1SUH5 as seed ortholog is 100%.
Bootstrap support for L0PFL2 as seed ortholog is 100%.

Group of orthologs #1258. Best score 82 bits
Score difference with first non-orthologous sequence - O.cuniculus:7 P.jiroveci:82

G1T510              	100.00%		L0PA37              	100.00%
Bootstrap support for G1T510 as seed ortholog is 64%.
Alternative seed ortholog is G1TAC4 (7 bits away from this cluster)
Bootstrap support for L0PA37 as seed ortholog is 100%.

Group of orthologs #1259. Best score 82 bits
Score difference with first non-orthologous sequence - O.cuniculus:82 P.jiroveci:82

G1TD88              	100.00%		L0PAF5              	100.00%
Bootstrap support for G1TD88 as seed ortholog is 100%.
Bootstrap support for L0PAF5 as seed ortholog is 100%.

Group of orthologs #1260. Best score 82 bits
Score difference with first non-orthologous sequence - O.cuniculus:82 P.jiroveci:82

G1TB33              	100.00%		L0PDS8              	100.00%
Bootstrap support for G1TB33 as seed ortholog is 100%.
Bootstrap support for L0PDS8 as seed ortholog is 100%.

Group of orthologs #1261. Best score 81 bits
Score difference with first non-orthologous sequence - O.cuniculus:25 P.jiroveci:81

G1SDB9              	100.00%		L0PG69              	100.00%
G1T6Z0              	72.81%		
G1SXM3              	65.25%		
G1SE17              	58.75%		
Bootstrap support for G1SDB9 as seed ortholog is 79%.
Bootstrap support for L0PG69 as seed ortholog is 100%.

Group of orthologs #1262. Best score 81 bits
Score difference with first non-orthologous sequence - O.cuniculus:81 P.jiroveci:81

G1SWL6              	100.00%		L0PFB5              	100.00%
G1T658              	15.50%		
G1TLT6              	12.28%		
Bootstrap support for G1SWL6 as seed ortholog is 100%.
Bootstrap support for L0PFB5 as seed ortholog is 100%.

Group of orthologs #1263. Best score 81 bits
Score difference with first non-orthologous sequence - O.cuniculus:7 P.jiroveci:81

G1T2J0              	100.00%		L0PEL1              	100.00%
G1SFH9              	63.16%		
Bootstrap support for G1T2J0 as seed ortholog is 56%.
Alternative seed ortholog is G1T454 (7 bits away from this cluster)
Bootstrap support for L0PEL1 as seed ortholog is 100%.

Group of orthologs #1264. Best score 81 bits
Score difference with first non-orthologous sequence - O.cuniculus:81 P.jiroveci:81

G1SFC8              	100.00%		L0P7C7              	100.00%
Bootstrap support for G1SFC8 as seed ortholog is 100%.
Bootstrap support for L0P7C7 as seed ortholog is 100%.

Group of orthologs #1265. Best score 81 bits
Score difference with first non-orthologous sequence - O.cuniculus:81 P.jiroveci:81

G1SJ20              	100.00%		L0PAP8              	100.00%
Bootstrap support for G1SJ20 as seed ortholog is 100%.
Bootstrap support for L0PAP8 as seed ortholog is 100%.

Group of orthologs #1266. Best score 81 bits
Score difference with first non-orthologous sequence - O.cuniculus:81 P.jiroveci:81

G1SN91              	100.00%		L0P7T1              	100.00%
Bootstrap support for G1SN91 as seed ortholog is 100%.
Bootstrap support for L0P7T1 as seed ortholog is 100%.

Group of orthologs #1267. Best score 81 bits
Score difference with first non-orthologous sequence - O.cuniculus:28 P.jiroveci:81

G1T743              	100.00%		L0PBA1              	100.00%
Bootstrap support for G1T743 as seed ortholog is 82%.
Bootstrap support for L0PBA1 as seed ortholog is 100%.

Group of orthologs #1268. Best score 81 bits
Score difference with first non-orthologous sequence - O.cuniculus:81 P.jiroveci:81

G1TBE5              	100.00%		L0PFH8              	100.00%
Bootstrap support for G1TBE5 as seed ortholog is 100%.
Bootstrap support for L0PFH8 as seed ortholog is 100%.

Group of orthologs #1269. Best score 80 bits
Score difference with first non-orthologous sequence - O.cuniculus:80 P.jiroveci:80

G1T8D4              	100.00%		L0PB53              	100.00%
G1SEH6              	39.21%		
Bootstrap support for G1T8D4 as seed ortholog is 100%.
Bootstrap support for L0PB53 as seed ortholog is 100%.

Group of orthologs #1270. Best score 80 bits
Score difference with first non-orthologous sequence - O.cuniculus:80 P.jiroveci:80

G1U7M0              	100.00%		L0PEQ9              	100.00%
G1SDL9              	10.86%		
Bootstrap support for G1U7M0 as seed ortholog is 100%.
Bootstrap support for L0PEQ9 as seed ortholog is 100%.

Group of orthologs #1271. Best score 80 bits
Score difference with first non-orthologous sequence - O.cuniculus:80 P.jiroveci:80

G1SZ12              	100.00%		L0PCX6              	100.00%
Bootstrap support for G1SZ12 as seed ortholog is 100%.
Bootstrap support for L0PCX6 as seed ortholog is 100%.

Group of orthologs #1272. Best score 80 bits
Score difference with first non-orthologous sequence - O.cuniculus:80 P.jiroveci:80

G1TDH3              	100.00%		L0PED2              	100.00%
Bootstrap support for G1TDH3 as seed ortholog is 100%.
Bootstrap support for L0PED2 as seed ortholog is 100%.

Group of orthologs #1273. Best score 80 bits
Score difference with first non-orthologous sequence - O.cuniculus:80 P.jiroveci:80

G1U266              	100.00%		L0PC72              	100.00%
Bootstrap support for G1U266 as seed ortholog is 100%.
Bootstrap support for L0PC72 as seed ortholog is 100%.

Group of orthologs #1274. Best score 79 bits
Score difference with first non-orthologous sequence - O.cuniculus:79 P.jiroveci:79

G1TQT7              	100.00%		L0PE51              	100.00%
G1T4I8              	43.30%		
G1TDR7              	37.39%		
G1SJ04              	28.89%		
Bootstrap support for G1TQT7 as seed ortholog is 100%.
Bootstrap support for L0PE51 as seed ortholog is 100%.

Group of orthologs #1275. Best score 79 bits
Score difference with first non-orthologous sequence - O.cuniculus:79 P.jiroveci:79

G1SQR7              	100.00%		L0P9T3              	100.00%
G1TNN4              	51.58%		
G1TQZ3              	16.84%		
Bootstrap support for G1SQR7 as seed ortholog is 100%.
Bootstrap support for L0P9T3 as seed ortholog is 100%.

Group of orthologs #1276. Best score 79 bits
Score difference with first non-orthologous sequence - O.cuniculus:79 P.jiroveci:79

G1SPI6              	100.00%		L0P724              	100.00%
Bootstrap support for G1SPI6 as seed ortholog is 100%.
Bootstrap support for L0P724 as seed ortholog is 100%.

Group of orthologs #1277. Best score 79 bits
Score difference with first non-orthologous sequence - O.cuniculus:79 P.jiroveci:79

G1SQG0              	100.00%		L0P868              	100.00%
Bootstrap support for G1SQG0 as seed ortholog is 100%.
Bootstrap support for L0P868 as seed ortholog is 100%.

Group of orthologs #1278. Best score 79 bits
Score difference with first non-orthologous sequence - O.cuniculus:79 P.jiroveci:79

G1SKW5              	100.00%		L0PDK7              	100.00%
Bootstrap support for G1SKW5 as seed ortholog is 100%.
Bootstrap support for L0PDK7 as seed ortholog is 100%.

Group of orthologs #1279. Best score 79 bits
Score difference with first non-orthologous sequence - O.cuniculus:79 P.jiroveci:79

G1SSB5              	100.00%		L0P8R9              	100.00%
Bootstrap support for G1SSB5 as seed ortholog is 100%.
Bootstrap support for L0P8R9 as seed ortholog is 100%.

Group of orthologs #1280. Best score 79 bits
Score difference with first non-orthologous sequence - O.cuniculus:79 P.jiroveci:79

G1SZH1              	100.00%		L0PDC5              	100.00%
Bootstrap support for G1SZH1 as seed ortholog is 100%.
Bootstrap support for L0PDC5 as seed ortholog is 100%.

Group of orthologs #1281. Best score 78 bits
Score difference with first non-orthologous sequence - O.cuniculus:78 P.jiroveci:78

G1SUT3              	100.00%		L0PDB5              	100.00%
G1U3H8              	100.00%		
Bootstrap support for G1SUT3 as seed ortholog is 100%.
Bootstrap support for G1U3H8 as seed ortholog is 100%.
Bootstrap support for L0PDB5 as seed ortholog is 100%.

Group of orthologs #1282. Best score 78 bits
Score difference with first non-orthologous sequence - O.cuniculus:78 P.jiroveci:78

G1SF97              	100.00%		L0PEH3              	100.00%
Bootstrap support for G1SF97 as seed ortholog is 100%.
Bootstrap support for L0PEH3 as seed ortholog is 100%.

Group of orthologs #1283. Best score 78 bits
Score difference with first non-orthologous sequence - O.cuniculus:78 P.jiroveci:78

G1SVU0              	100.00%		L0PAD6              	100.00%
Bootstrap support for G1SVU0 as seed ortholog is 100%.
Bootstrap support for L0PAD6 as seed ortholog is 100%.

Group of orthologs #1284. Best score 78 bits
Score difference with first non-orthologous sequence - O.cuniculus:78 P.jiroveci:78

G1T8N3              	100.00%		L0PCB5              	100.00%
Bootstrap support for G1T8N3 as seed ortholog is 100%.
Bootstrap support for L0PCB5 as seed ortholog is 100%.

Group of orthologs #1285. Best score 78 bits
Score difference with first non-orthologous sequence - O.cuniculus:78 P.jiroveci:78

G1TAM3              	100.00%		L0PD90              	100.00%
Bootstrap support for G1TAM3 as seed ortholog is 100%.
Bootstrap support for L0PD90 as seed ortholog is 100%.

Group of orthologs #1286. Best score 77 bits
Score difference with first non-orthologous sequence - O.cuniculus:77 P.jiroveci:77

G1SFX0              	100.00%		L0PGX1              	100.00%
G1TJR0              	59.23%		
Bootstrap support for G1SFX0 as seed ortholog is 100%.
Bootstrap support for L0PGX1 as seed ortholog is 100%.

Group of orthologs #1287. Best score 77 bits
Score difference with first non-orthologous sequence - O.cuniculus:77 P.jiroveci:77

G1U895              	100.00%		L0P883              	100.00%
G1U516              	85.64%		
Bootstrap support for G1U895 as seed ortholog is 100%.
Bootstrap support for L0P883 as seed ortholog is 100%.

Group of orthologs #1288. Best score 77 bits
Score difference with first non-orthologous sequence - O.cuniculus:77 P.jiroveci:77

G1SHR4              	100.00%		L0PEQ6              	100.00%
Bootstrap support for G1SHR4 as seed ortholog is 100%.
Bootstrap support for L0PEQ6 as seed ortholog is 100%.

Group of orthologs #1289. Best score 77 bits
Score difference with first non-orthologous sequence - O.cuniculus:77 P.jiroveci:77

G1TPQ4              	100.00%		L0PHQ1              	100.00%
Bootstrap support for G1TPQ4 as seed ortholog is 100%.
Bootstrap support for L0PHQ1 as seed ortholog is 100%.

Group of orthologs #1290. Best score 77 bits
Score difference with first non-orthologous sequence - O.cuniculus:77 P.jiroveci:77

G1U0Q1              	100.00%		L0PGW3              	100.00%
Bootstrap support for G1U0Q1 as seed ortholog is 100%.
Bootstrap support for L0PGW3 as seed ortholog is 100%.

Group of orthologs #1291. Best score 76 bits
Score difference with first non-orthologous sequence - O.cuniculus:76 P.jiroveci:76

G1SK24              	100.00%		L0P7Y0              	100.00%
G1SRG1              	65.91%		
G1SG00              	17.65%		
G1SSE1              	17.07%		
G1SMX4              	15.86%		
G1SG24              	14.31%		
G1T4Z0              	12.12%		
G1T2R7              	9.36%		
Bootstrap support for G1SK24 as seed ortholog is 100%.
Bootstrap support for L0P7Y0 as seed ortholog is 100%.

Group of orthologs #1292. Best score 76 bits
Score difference with first non-orthologous sequence - O.cuniculus:76 P.jiroveci:76

G1SZ44              	100.00%		L0PD91              	100.00%
G1TSX5              	100.00%		
G1U675              	95.24%		
Bootstrap support for G1SZ44 as seed ortholog is 100%.
Bootstrap support for G1TSX5 as seed ortholog is 100%.
Bootstrap support for L0PD91 as seed ortholog is 100%.

Group of orthologs #1293. Best score 76 bits
Score difference with first non-orthologous sequence - O.cuniculus:76 P.jiroveci:76

O46480              	100.00%		L0PI79              	100.00%
G1SYX8              	82.58%		
G1SD04              	45.73%		
Bootstrap support for O46480 as seed ortholog is 100%.
Bootstrap support for L0PI79 as seed ortholog is 100%.

Group of orthologs #1294. Best score 76 bits
Score difference with first non-orthologous sequence - O.cuniculus:76 P.jiroveci:76

G1TPN2              	100.00%		L0PGI1              	100.00%
G1SJS4              	5.36%		
Bootstrap support for G1TPN2 as seed ortholog is 100%.
Bootstrap support for L0PGI1 as seed ortholog is 100%.

Group of orthologs #1295. Best score 76 bits
Score difference with first non-orthologous sequence - O.cuniculus:76 P.jiroveci:76

G1U6Y8              	100.00%		L0P988              	100.00%
Bootstrap support for G1U6Y8 as seed ortholog is 100%.
Bootstrap support for L0P988 as seed ortholog is 100%.

Group of orthologs #1296. Best score 76 bits
Score difference with first non-orthologous sequence - O.cuniculus:76 P.jiroveci:76

G1U9Q1              	100.00%		L0P9K1              	100.00%
Bootstrap support for G1U9Q1 as seed ortholog is 100%.
Bootstrap support for L0P9K1 as seed ortholog is 100%.

Group of orthologs #1297. Best score 75 bits
Score difference with first non-orthologous sequence - O.cuniculus:75 P.jiroveci:75

G1SMW8              	100.00%		L0PAD3              	100.00%
G1SF64              	72.78%		
G1TK12              	34.31%		
B7NZE2              	32.43%		
G1TTW4              	25.76%		
G1TAE2              	7.61%		
G1SPW3              	7.30%		
G1TB94              	6.78%		
Bootstrap support for G1SMW8 as seed ortholog is 100%.
Bootstrap support for L0PAD3 as seed ortholog is 100%.

Group of orthologs #1298. Best score 75 bits
Score difference with first non-orthologous sequence - O.cuniculus:75 P.jiroveci:75

G1SPE6              	100.00%		L0P7K1              	100.00%
Bootstrap support for G1SPE6 as seed ortholog is 100%.
Bootstrap support for L0P7K1 as seed ortholog is 100%.

Group of orthologs #1299. Best score 75 bits
Score difference with first non-orthologous sequence - O.cuniculus:75 P.jiroveci:75

G1SI60              	100.00%		L0PE73              	100.00%
Bootstrap support for G1SI60 as seed ortholog is 100%.
Bootstrap support for L0PE73 as seed ortholog is 100%.

Group of orthologs #1300. Best score 75 bits
Score difference with first non-orthologous sequence - O.cuniculus:75 P.jiroveci:75

G1SV75              	100.00%		L0PAS9              	100.00%
Bootstrap support for G1SV75 as seed ortholog is 100%.
Bootstrap support for L0PAS9 as seed ortholog is 100%.

Group of orthologs #1301. Best score 75 bits
Score difference with first non-orthologous sequence - O.cuniculus:75 P.jiroveci:75

G1T4R0              	100.00%		L0P813              	100.00%
Bootstrap support for G1T4R0 as seed ortholog is 100%.
Bootstrap support for L0P813 as seed ortholog is 100%.

Group of orthologs #1302. Best score 74 bits
Score difference with first non-orthologous sequence - O.cuniculus:74 P.jiroveci:74

G1SG37              	100.00%		L0P831              	100.00%
                    	       		L0PDC1              	41.77%
Bootstrap support for G1SG37 as seed ortholog is 100%.
Bootstrap support for L0P831 as seed ortholog is 100%.

Group of orthologs #1303. Best score 74 bits
Score difference with first non-orthologous sequence - O.cuniculus:74 P.jiroveci:74

G1SHW4              	100.00%		L0P887              	100.00%
Bootstrap support for G1SHW4 as seed ortholog is 100%.
Bootstrap support for L0P887 as seed ortholog is 100%.

Group of orthologs #1304. Best score 74 bits
Score difference with first non-orthologous sequence - O.cuniculus:74 P.jiroveci:74

G1SWJ5              	100.00%		L0PCB6              	100.00%
Bootstrap support for G1SWJ5 as seed ortholog is 100%.
Bootstrap support for L0PCB6 as seed ortholog is 100%.

Group of orthologs #1305. Best score 74 bits
Score difference with first non-orthologous sequence - O.cuniculus:74 P.jiroveci:74

G1T6Z7              	100.00%		L0P954              	100.00%
Bootstrap support for G1T6Z7 as seed ortholog is 100%.
Bootstrap support for L0P954 as seed ortholog is 100%.

Group of orthologs #1306. Best score 73 bits
Score difference with first non-orthologous sequence - O.cuniculus:73 P.jiroveci:73

G1T1C5              	100.00%		L0PBA0              	100.00%
G1U060              	58.48%		
Bootstrap support for G1T1C5 as seed ortholog is 100%.
Bootstrap support for L0PBA0 as seed ortholog is 100%.

Group of orthologs #1307. Best score 73 bits
Score difference with first non-orthologous sequence - O.cuniculus:73 P.jiroveci:73

G1SE53              	100.00%		L0PAK5              	100.00%
Bootstrap support for G1SE53 as seed ortholog is 100%.
Bootstrap support for L0PAK5 as seed ortholog is 100%.

Group of orthologs #1308. Best score 73 bits
Score difference with first non-orthologous sequence - O.cuniculus:73 P.jiroveci:73

G1SFU1              	100.00%		L0PAV0              	100.00%
Bootstrap support for G1SFU1 as seed ortholog is 100%.
Bootstrap support for L0PAV0 as seed ortholog is 100%.

Group of orthologs #1309. Best score 73 bits
Score difference with first non-orthologous sequence - O.cuniculus:73 P.jiroveci:73

G1T6I5              	100.00%		L0P7Y1              	100.00%
Bootstrap support for G1T6I5 as seed ortholog is 100%.
Bootstrap support for L0P7Y1 as seed ortholog is 100%.

Group of orthologs #1310. Best score 73 bits
Score difference with first non-orthologous sequence - O.cuniculus:73 P.jiroveci:73

G1SZJ5              	100.00%		L0PG35              	100.00%
Bootstrap support for G1SZJ5 as seed ortholog is 100%.
Bootstrap support for L0PG35 as seed ortholog is 100%.

Group of orthologs #1311. Best score 72 bits
Score difference with first non-orthologous sequence - O.cuniculus:72 P.jiroveci:72

G1SMU8              	100.00%		L0PE66              	100.00%
Bootstrap support for G1SMU8 as seed ortholog is 100%.
Bootstrap support for L0PE66 as seed ortholog is 100%.

Group of orthologs #1312. Best score 72 bits
Score difference with first non-orthologous sequence - O.cuniculus:72 P.jiroveci:72

G1T006              	100.00%		L0P9V0              	100.00%
Bootstrap support for G1T006 as seed ortholog is 100%.
Bootstrap support for L0P9V0 as seed ortholog is 100%.

Group of orthologs #1313. Best score 72 bits
Score difference with first non-orthologous sequence - O.cuniculus:72 P.jiroveci:72

G1T870              	100.00%		L0PA11              	100.00%
Bootstrap support for G1T870 as seed ortholog is 100%.
Bootstrap support for L0PA11 as seed ortholog is 100%.

Group of orthologs #1314. Best score 72 bits
Score difference with first non-orthologous sequence - O.cuniculus:72 P.jiroveci:72

G1TA46              	100.00%		L0PBR0              	100.00%
Bootstrap support for G1TA46 as seed ortholog is 100%.
Bootstrap support for L0PBR0 as seed ortholog is 100%.

Group of orthologs #1315. Best score 71 bits
Score difference with first non-orthologous sequence - O.cuniculus:71 P.jiroveci:71

G1TC28              	100.00%		L0P944              	100.00%
G1TQG6              	58.45%		
G1TD22              	10.46%		
G1SR34              	8.61%		
Bootstrap support for G1TC28 as seed ortholog is 100%.
Bootstrap support for L0P944 as seed ortholog is 100%.

Group of orthologs #1316. Best score 71 bits
Score difference with first non-orthologous sequence - O.cuniculus:71 P.jiroveci:71

G1SFH8              	100.00%		L0PBP5              	100.00%
G1STH9              	46.70%		
Bootstrap support for G1SFH8 as seed ortholog is 100%.
Bootstrap support for L0PBP5 as seed ortholog is 100%.

Group of orthologs #1317. Best score 71 bits
Score difference with first non-orthologous sequence - O.cuniculus:71 P.jiroveci:71

G1T1G0              	100.00%		L0PDR4              	100.00%
G1SLN3              	98.20%		
Bootstrap support for G1T1G0 as seed ortholog is 100%.
Bootstrap support for L0PDR4 as seed ortholog is 100%.

Group of orthologs #1318. Best score 71 bits
Score difference with first non-orthologous sequence - O.cuniculus:71 P.jiroveci:71

G1TE60              	100.00%		L0PC28              	100.00%
G1TSQ8              	13.49%		
Bootstrap support for G1TE60 as seed ortholog is 100%.
Bootstrap support for L0PC28 as seed ortholog is 100%.

Group of orthologs #1319. Best score 71 bits
Score difference with first non-orthologous sequence - O.cuniculus:71 P.jiroveci:71

G1SM43              	100.00%		L0PA21              	100.00%
Bootstrap support for G1SM43 as seed ortholog is 100%.
Bootstrap support for L0PA21 as seed ortholog is 100%.

Group of orthologs #1320. Best score 71 bits
Score difference with first non-orthologous sequence - O.cuniculus:71 P.jiroveci:71

G1SHD5              	100.00%		L0PFF1              	100.00%
Bootstrap support for G1SHD5 as seed ortholog is 100%.
Bootstrap support for L0PFF1 as seed ortholog is 100%.

Group of orthologs #1321. Best score 71 bits
Score difference with first non-orthologous sequence - O.cuniculus:71 P.jiroveci:71

G1SXI9              	100.00%		L0PCJ4              	100.00%
Bootstrap support for G1SXI9 as seed ortholog is 100%.
Bootstrap support for L0PCJ4 as seed ortholog is 100%.

Group of orthologs #1322. Best score 71 bits
Score difference with first non-orthologous sequence - O.cuniculus:71 P.jiroveci:71

G1SXR5              	100.00%		L0PE38              	100.00%
Bootstrap support for G1SXR5 as seed ortholog is 100%.
Bootstrap support for L0PE38 as seed ortholog is 100%.

Group of orthologs #1323. Best score 71 bits
Score difference with first non-orthologous sequence - O.cuniculus:71 P.jiroveci:71

G1T3Y7              	100.00%		L0PAE3              	100.00%
Bootstrap support for G1T3Y7 as seed ortholog is 100%.
Bootstrap support for L0PAE3 as seed ortholog is 100%.

Group of orthologs #1324. Best score 70 bits
Score difference with first non-orthologous sequence - O.cuniculus:70 P.jiroveci:70

G1SP33              	100.00%		L0P9M2              	100.00%
Bootstrap support for G1SP33 as seed ortholog is 100%.
Bootstrap support for L0P9M2 as seed ortholog is 100%.

Group of orthologs #1325. Best score 70 bits
Score difference with first non-orthologous sequence - O.cuniculus:70 P.jiroveci:70

G1SRI1              	100.00%		L0PDZ0              	100.00%
Bootstrap support for G1SRI1 as seed ortholog is 100%.
Bootstrap support for L0PDZ0 as seed ortholog is 100%.

Group of orthologs #1326. Best score 69 bits
Score difference with first non-orthologous sequence - O.cuniculus:69 P.jiroveci:69

G1SKD3              	100.00%		L0PDW6              	100.00%
Bootstrap support for G1SKD3 as seed ortholog is 100%.
Bootstrap support for L0PDW6 as seed ortholog is 100%.

Group of orthologs #1327. Best score 68 bits
Score difference with first non-orthologous sequence - O.cuniculus:68 P.jiroveci:68

G1SNE5              	100.00%		L0PDQ0              	100.00%
G1SXP4              	19.76%		
Bootstrap support for G1SNE5 as seed ortholog is 100%.
Bootstrap support for L0PDQ0 as seed ortholog is 100%.

Group of orthologs #1328. Best score 68 bits
Score difference with first non-orthologous sequence - O.cuniculus:68 P.jiroveci:68

G1SCV8              	100.00%		L0PFC4              	100.00%
Bootstrap support for G1SCV8 as seed ortholog is 100%.
Bootstrap support for L0PFC4 as seed ortholog is 100%.

Group of orthologs #1329. Best score 67 bits
Score difference with first non-orthologous sequence - O.cuniculus:67 P.jiroveci:67

G1SPL6              	100.00%		L0PAZ6              	100.00%
G1SJS5              	35.96%		
G1SGE0              	35.39%		
Bootstrap support for G1SPL6 as seed ortholog is 100%.
Bootstrap support for L0PAZ6 as seed ortholog is 100%.

Group of orthologs #1330. Best score 67 bits
Score difference with first non-orthologous sequence - O.cuniculus:67 P.jiroveci:67

G1SY53              	100.00%		L0PAE2              	100.00%
G1U4H0              	100.00%		
Bootstrap support for G1SY53 as seed ortholog is 100%.
Bootstrap support for G1U4H0 as seed ortholog is 100%.
Bootstrap support for L0PAE2 as seed ortholog is 100%.

Group of orthologs #1331. Best score 67 bits
Score difference with first non-orthologous sequence - O.cuniculus:67 P.jiroveci:67

G1SZB6              	100.00%		L0PEU8              	100.00%
Bootstrap support for G1SZB6 as seed ortholog is 100%.
Bootstrap support for L0PEU8 as seed ortholog is 100%.

Group of orthologs #1332. Best score 67 bits
Score difference with first non-orthologous sequence - O.cuniculus:67 P.jiroveci:67

G1TA50              	100.00%		L0PDZ2              	100.00%
Bootstrap support for G1TA50 as seed ortholog is 100%.
Bootstrap support for L0PDZ2 as seed ortholog is 100%.

Group of orthologs #1333. Best score 67 bits
Score difference with first non-orthologous sequence - O.cuniculus:67 P.jiroveci:67

G1TDM7              	100.00%		L0PBW6              	100.00%
Bootstrap support for G1TDM7 as seed ortholog is 100%.
Bootstrap support for L0PBW6 as seed ortholog is 100%.

Group of orthologs #1334. Best score 66 bits
Score difference with first non-orthologous sequence - O.cuniculus:66 P.jiroveci:66

G1SRH7              	100.00%		L0PFT1              	100.00%
G1SL16              	32.73%		
G1U1X8              	8.63%		
G1TFU8              	8.27%		
G1SEE3              	6.83%		
G1TJT9              	5.04%		
Bootstrap support for G1SRH7 as seed ortholog is 100%.
Bootstrap support for L0PFT1 as seed ortholog is 100%.

Group of orthologs #1335. Best score 66 bits
Score difference with first non-orthologous sequence - O.cuniculus:66 P.jiroveci:66

G1SEN3              	100.00%		L0PFS6              	100.00%
G1SCM9              	48.34%		
Bootstrap support for G1SEN3 as seed ortholog is 100%.
Bootstrap support for L0PFS6 as seed ortholog is 100%.

Group of orthologs #1336. Best score 66 bits
Score difference with first non-orthologous sequence - O.cuniculus:22 P.jiroveci:66

G1STB1              	100.00%		L0P881              	100.00%
G1U3P7              	80.36%		
Bootstrap support for G1STB1 as seed ortholog is 91%.
Bootstrap support for L0P881 as seed ortholog is 100%.

Group of orthologs #1337. Best score 66 bits
Score difference with first non-orthologous sequence - O.cuniculus:66 P.jiroveci:66

G1U5Q4              	100.00%		L0PB93              	100.00%
G1T4Y1              	93.61%		
Bootstrap support for G1U5Q4 as seed ortholog is 100%.
Bootstrap support for L0PB93 as seed ortholog is 100%.

Group of orthologs #1338. Best score 66 bits
Score difference with first non-orthologous sequence - O.cuniculus:66 P.jiroveci:66

G1SM21              	100.00%		L0PAF1              	100.00%
Bootstrap support for G1SM21 as seed ortholog is 100%.
Bootstrap support for L0PAF1 as seed ortholog is 100%.

Group of orthologs #1339. Best score 66 bits
Score difference with first non-orthologous sequence - O.cuniculus:66 P.jiroveci:66

G1SMB1              	100.00%		L0PAG5              	100.00%
Bootstrap support for G1SMB1 as seed ortholog is 100%.
Bootstrap support for L0PAG5 as seed ortholog is 100%.

Group of orthologs #1340. Best score 66 bits
Score difference with first non-orthologous sequence - O.cuniculus:66 P.jiroveci:66

G1STG2              	100.00%		L0PE59              	100.00%
Bootstrap support for G1STG2 as seed ortholog is 100%.
Bootstrap support for L0PE59 as seed ortholog is 100%.

Group of orthologs #1341. Best score 66 bits
Score difference with first non-orthologous sequence - O.cuniculus:66 P.jiroveci:66

G1SWE4              	100.00%		L0PBY4              	100.00%
Bootstrap support for G1SWE4 as seed ortholog is 100%.
Bootstrap support for L0PBY4 as seed ortholog is 100%.

Group of orthologs #1342. Best score 66 bits
Score difference with first non-orthologous sequence - O.cuniculus:66 P.jiroveci:66

G1T487              	100.00%		L0P9V1              	100.00%
Bootstrap support for G1T487 as seed ortholog is 100%.
Bootstrap support for L0P9V1 as seed ortholog is 100%.

Group of orthologs #1343. Best score 65 bits
Score difference with first non-orthologous sequence - O.cuniculus:65 P.jiroveci:65

P80584              	100.00%		L0PE16              	100.00%
G1U0S3              	95.83%		
G1U3M3              	92.36%		
G1SGU9              	78.47%		
Bootstrap support for P80584 as seed ortholog is 100%.
Bootstrap support for L0PE16 as seed ortholog is 100%.

Group of orthologs #1344. Best score 64 bits
Score difference with first non-orthologous sequence - O.cuniculus:64 P.jiroveci:64

G1SRF1              	100.00%		L0PE07              	100.00%
Bootstrap support for G1SRF1 as seed ortholog is 100%.
Bootstrap support for L0PE07 as seed ortholog is 100%.

Group of orthologs #1345. Best score 64 bits
Score difference with first non-orthologous sequence - O.cuniculus:64 P.jiroveci:64

G1SX33              	100.00%		L0PCE6              	100.00%
Bootstrap support for G1SX33 as seed ortholog is 100%.
Bootstrap support for L0PCE6 as seed ortholog is 100%.

Group of orthologs #1346. Best score 64 bits
Score difference with first non-orthologous sequence - O.cuniculus:64 P.jiroveci:64

G1T8K1              	100.00%		L0PH05              	100.00%
Bootstrap support for G1T8K1 as seed ortholog is 100%.
Bootstrap support for L0PH05 as seed ortholog is 100%.

Group of orthologs #1347. Best score 64 bits
Score difference with first non-orthologous sequence - O.cuniculus:64 P.jiroveci:64

G1TIR7              	100.00%		L0PGG4              	100.00%
Bootstrap support for G1TIR7 as seed ortholog is 100%.
Bootstrap support for L0PGG4 as seed ortholog is 100%.

Group of orthologs #1348. Best score 64 bits
Score difference with first non-orthologous sequence - O.cuniculus:64 P.jiroveci:64

G1TWA4              	100.00%		L0PC69              	100.00%
Bootstrap support for G1TWA4 as seed ortholog is 100%.
Bootstrap support for L0PC69 as seed ortholog is 100%.

Group of orthologs #1349. Best score 64 bits
Score difference with first non-orthologous sequence - O.cuniculus:64 P.jiroveci:64

G1U2Y3              	100.00%		L0P9R4              	100.00%
Bootstrap support for G1U2Y3 as seed ortholog is 100%.
Bootstrap support for L0P9R4 as seed ortholog is 100%.

Group of orthologs #1350. Best score 63 bits
Score difference with first non-orthologous sequence - O.cuniculus:10 P.jiroveci:63

G1TTJ1              	100.00%		L0P8G6              	100.00%
G1TLZ8              	7.46%		
Q9GKX2              	5.92%		
Bootstrap support for G1TTJ1 as seed ortholog is 61%.
Alternative seed ortholog is G1SH49 (10 bits away from this cluster)
Bootstrap support for L0P8G6 as seed ortholog is 100%.

Group of orthologs #1351. Best score 63 bits
Score difference with first non-orthologous sequence - O.cuniculus:63 P.jiroveci:63

G1SL28              	100.00%		L0P9X8              	100.00%
G1TSE2              	17.05%		
Bootstrap support for G1SL28 as seed ortholog is 100%.
Bootstrap support for L0P9X8 as seed ortholog is 100%.

Group of orthologs #1352. Best score 63 bits
Score difference with first non-orthologous sequence - O.cuniculus:63 P.jiroveci:63

G1U7L1              	100.00%		L0PF02              	100.00%
G1TL08              	84.76%		
Bootstrap support for G1U7L1 as seed ortholog is 100%.
Bootstrap support for L0PF02 as seed ortholog is 100%.

Group of orthologs #1353. Best score 63 bits
Score difference with first non-orthologous sequence - O.cuniculus:63 P.jiroveci:63

G1SCL8              	100.00%		L0PFH5              	100.00%
Bootstrap support for G1SCL8 as seed ortholog is 100%.
Bootstrap support for L0PFH5 as seed ortholog is 100%.

Group of orthologs #1354. Best score 63 bits
Score difference with first non-orthologous sequence - O.cuniculus:63 P.jiroveci:63

G1TWT4              	100.00%		L0PAY8              	100.00%
Bootstrap support for G1TWT4 as seed ortholog is 100%.
Bootstrap support for L0PAY8 as seed ortholog is 100%.

Group of orthologs #1355. Best score 63 bits
Score difference with first non-orthologous sequence - O.cuniculus:63 P.jiroveci:63

G1TZS9              	100.00%		L0PAV4              	100.00%
Bootstrap support for G1TZS9 as seed ortholog is 100%.
Bootstrap support for L0PAV4 as seed ortholog is 100%.

Group of orthologs #1356. Best score 62 bits
Score difference with first non-orthologous sequence - O.cuniculus:62 P.jiroveci:62

G1SK83              	100.00%		L0PA64              	100.00%
G1SLD4              	25.72%		
G1SN48              	21.31%		
G1T1W5              	18.26%		
G1SKG3              	15.07%		
G1T2E5              	14.31%		
G1TB01              	11.57%		
G1T3F4              	11.26%		
G1SJ58              	9.74%		
G1SV58              	5.63%		
Bootstrap support for G1SK83 as seed ortholog is 100%.
Bootstrap support for L0PA64 as seed ortholog is 100%.

Group of orthologs #1357. Best score 62 bits
Score difference with first non-orthologous sequence - O.cuniculus:62 P.jiroveci:62

G1SF82              	100.00%		L0PBS8              	100.00%
Bootstrap support for G1SF82 as seed ortholog is 100%.
Bootstrap support for L0PBS8 as seed ortholog is 100%.

Group of orthologs #1358. Best score 62 bits
Score difference with first non-orthologous sequence - O.cuniculus:62 P.jiroveci:62

G1SY27              	100.00%		L0PAI3              	100.00%
Bootstrap support for G1SY27 as seed ortholog is 100%.
Bootstrap support for L0PAI3 as seed ortholog is 100%.

Group of orthologs #1359. Best score 62 bits
Score difference with first non-orthologous sequence - O.cuniculus:62 P.jiroveci:62

G1SVC8              	100.00%		L0PDH5              	100.00%
Bootstrap support for G1SVC8 as seed ortholog is 100%.
Bootstrap support for L0PDH5 as seed ortholog is 100%.

Group of orthologs #1360. Best score 62 bits
Score difference with first non-orthologous sequence - O.cuniculus:62 P.jiroveci:62

G1TCZ0              	100.00%		L0P7U7              	100.00%
Bootstrap support for G1TCZ0 as seed ortholog is 100%.
Bootstrap support for L0P7U7 as seed ortholog is 100%.

Group of orthologs #1361. Best score 62 bits
Score difference with first non-orthologous sequence - O.cuniculus:62 P.jiroveci:62

G1TM35              	100.00%		L0PEG8              	100.00%
Bootstrap support for G1TM35 as seed ortholog is 100%.
Bootstrap support for L0PEG8 as seed ortholog is 100%.

Group of orthologs #1362. Best score 61 bits
Score difference with first non-orthologous sequence - O.cuniculus:61 P.jiroveci:61

G1SDH2              	100.00%		L0PG83              	100.00%
Bootstrap support for G1SDH2 as seed ortholog is 100%.
Bootstrap support for L0PG83 as seed ortholog is 100%.

Group of orthologs #1363. Best score 61 bits
Score difference with first non-orthologous sequence - O.cuniculus:61 P.jiroveci:61

G1SQA1              	100.00%		L0PDN1              	100.00%
Bootstrap support for G1SQA1 as seed ortholog is 100%.
Bootstrap support for L0PDN1 as seed ortholog is 100%.

Group of orthologs #1364. Best score 61 bits
Score difference with first non-orthologous sequence - O.cuniculus:61 P.jiroveci:61

G1TS88              	100.00%		L0P7Q6              	100.00%
Bootstrap support for G1TS88 as seed ortholog is 100%.
Bootstrap support for L0P7Q6 as seed ortholog is 100%.

Group of orthologs #1365. Best score 59 bits
Score difference with first non-orthologous sequence - O.cuniculus:59 P.jiroveci:16

G1SSK4              	100.00%		L0PBB5              	100.00%
G1SCI9              	30.40%		
G1TI92              	30.40%		
G1TFZ3              	30.09%		
G1U1U4              	27.66%		
G1SL50              	27.05%		
G1SQ29              	27.05%		
G1U7K9              	26.44%		
G1TLG4              	25.53%		
G1TSB8              	22.19%		
G1U2Q5              	12.16%		
G1TFA7              	11.55%		
G1U2M7              	10.33%		
G1U7S2              	6.38%		
Bootstrap support for G1SSK4 as seed ortholog is 100%.
Bootstrap support for L0PBB5 as seed ortholog is 61%.
Alternative seed ortholog is L0PDF6 (16 bits away from this cluster)

Group of orthologs #1366. Best score 59 bits
Score difference with first non-orthologous sequence - O.cuniculus:59 P.jiroveci:59

G1TZ80              	100.00%		L0PC15              	100.00%
G1SXM7              	55.26%		
G1SV43              	36.14%		
G1SSM4              	30.35%		
G1SSL9              	29.82%		
G1TZG2              	19.47%		
G1TBC5              	19.30%		
Bootstrap support for G1TZ80 as seed ortholog is 100%.
Bootstrap support for L0PC15 as seed ortholog is 100%.

Group of orthologs #1367. Best score 59 bits
Score difference with first non-orthologous sequence - O.cuniculus:59 P.jiroveci:59

G1SCW4              	100.00%		L0PB91              	100.00%
G1U826              	100.00%		
G1TZF3              	30.23%		
Bootstrap support for G1SCW4 as seed ortholog is 100%.
Bootstrap support for G1U826 as seed ortholog is 100%.
Bootstrap support for L0PB91 as seed ortholog is 100%.

Group of orthologs #1368. Best score 59 bits
Score difference with first non-orthologous sequence - O.cuniculus:59 P.jiroveci:59

G1TAQ2              	100.00%		L0PFT6              	100.00%
                    	       		L0P6V3              	45.34%
Bootstrap support for G1TAQ2 as seed ortholog is 100%.
Bootstrap support for L0PFT6 as seed ortholog is 100%.

Group of orthologs #1369. Best score 59 bits
Score difference with first non-orthologous sequence - O.cuniculus:59 P.jiroveci:59

G1TN80              	100.00%		L0PCN6              	100.00%
G1TL01              	94.12%		
Bootstrap support for G1TN80 as seed ortholog is 100%.
Bootstrap support for L0PCN6 as seed ortholog is 100%.

Group of orthologs #1370. Best score 59 bits
Score difference with first non-orthologous sequence - O.cuniculus:59 P.jiroveci:59

P11845              	100.00%		L0P7J7              	100.00%
G1TXE0              	34.10%		
Bootstrap support for P11845 as seed ortholog is 100%.
Bootstrap support for L0P7J7 as seed ortholog is 100%.

Group of orthologs #1371. Best score 59 bits
Score difference with first non-orthologous sequence - O.cuniculus:8 P.jiroveci:59

G1TUR8              	100.00%		L0P8Q3              	100.00%
Bootstrap support for G1TUR8 as seed ortholog is 61%.
Alternative seed ortholog is G1TBF0 (8 bits away from this cluster)
Bootstrap support for L0P8Q3 as seed ortholog is 100%.

Group of orthologs #1372. Best score 59 bits
Score difference with first non-orthologous sequence - O.cuniculus:59 P.jiroveci:59

G1TX39              	100.00%		L0PEH0              	100.00%
Bootstrap support for G1TX39 as seed ortholog is 100%.
Bootstrap support for L0PEH0 as seed ortholog is 100%.

Group of orthologs #1373. Best score 58 bits
Score difference with first non-orthologous sequence - O.cuniculus:58 P.jiroveci:58

G1TRS7              	100.00%		L0PB39              	100.00%
G1U544              	64.29%		
Bootstrap support for G1TRS7 as seed ortholog is 100%.
Bootstrap support for L0PB39 as seed ortholog is 100%.

Group of orthologs #1374. Best score 58 bits
Score difference with first non-orthologous sequence - O.cuniculus:58 P.jiroveci:58

G1SM48              	100.00%		L0P9H6              	100.00%
Bootstrap support for G1SM48 as seed ortholog is 100%.
Bootstrap support for L0P9H6 as seed ortholog is 100%.

Group of orthologs #1375. Best score 58 bits
Score difference with first non-orthologous sequence - O.cuniculus:58 P.jiroveci:58

G1TMZ2              	100.00%		L0P8D1              	100.00%
Bootstrap support for G1TMZ2 as seed ortholog is 100%.
Bootstrap support for L0P8D1 as seed ortholog is 100%.

Group of orthologs #1376. Best score 57 bits
Score difference with first non-orthologous sequence - O.cuniculus:57 P.jiroveci:57

G1TPI7              	100.00%		L0PEB3              	100.00%
G1SEY5              	47.19%		
Bootstrap support for G1TPI7 as seed ortholog is 100%.
Bootstrap support for L0PEB3 as seed ortholog is 100%.

Group of orthologs #1377. Best score 57 bits
Score difference with first non-orthologous sequence - O.cuniculus:57 P.jiroveci:57

G1SJK1              	100.00%		L0PD80              	100.00%
Bootstrap support for G1SJK1 as seed ortholog is 100%.
Bootstrap support for L0PD80 as seed ortholog is 100%.

Group of orthologs #1378. Best score 57 bits
Score difference with first non-orthologous sequence - O.cuniculus:57 P.jiroveci:57

G1TB37              	100.00%		L0P9C0              	100.00%
Bootstrap support for G1TB37 as seed ortholog is 100%.
Bootstrap support for L0P9C0 as seed ortholog is 100%.

Group of orthologs #1379. Best score 56 bits
Score difference with first non-orthologous sequence - O.cuniculus:56 P.jiroveci:56

G1SUD9              	100.00%		L0P8K9              	100.00%
Bootstrap support for G1SUD9 as seed ortholog is 100%.
Bootstrap support for L0P8K9 as seed ortholog is 100%.

Group of orthologs #1380. Best score 56 bits
Score difference with first non-orthologous sequence - O.cuniculus:56 P.jiroveci:56

G1SX73              	100.00%		L0PGC3              	100.00%
Bootstrap support for G1SX73 as seed ortholog is 100%.
Bootstrap support for L0PGC3 as seed ortholog is 100%.

Group of orthologs #1381. Best score 56 bits
Score difference with first non-orthologous sequence - O.cuniculus:56 P.jiroveci:56

G1SW89              	100.00%		L0PHJ4              	100.00%
Bootstrap support for G1SW89 as seed ortholog is 100%.
Bootstrap support for L0PHJ4 as seed ortholog is 100%.

Group of orthologs #1382. Best score 56 bits
Score difference with first non-orthologous sequence - O.cuniculus:56 P.jiroveci:56

G1SYR8              	100.00%		L0PFE2              	100.00%
Bootstrap support for G1SYR8 as seed ortholog is 100%.
Bootstrap support for L0PFE2 as seed ortholog is 100%.

Group of orthologs #1383. Best score 55 bits
Score difference with first non-orthologous sequence - O.cuniculus:55 P.jiroveci:55

G1TF59              	100.00%		L0PG42              	100.00%
G1SKZ8              	37.98%		
G1TY53              	37.50%		
G1TSL0              	29.81%		
Bootstrap support for G1TF59 as seed ortholog is 100%.
Bootstrap support for L0PG42 as seed ortholog is 100%.

Group of orthologs #1384. Best score 55 bits
Score difference with first non-orthologous sequence - O.cuniculus:55 P.jiroveci:55

G1SR69              	100.00%		L0PGU4              	100.00%
Bootstrap support for G1SR69 as seed ortholog is 100%.
Bootstrap support for L0PGU4 as seed ortholog is 100%.

Group of orthologs #1385. Best score 55 bits
Score difference with first non-orthologous sequence - O.cuniculus:55 P.jiroveci:55

G1SZ82              	100.00%		L0PDN9              	100.00%
Bootstrap support for G1SZ82 as seed ortholog is 100%.
Bootstrap support for L0PDN9 as seed ortholog is 100%.

Group of orthologs #1386. Best score 55 bits
Score difference with first non-orthologous sequence - O.cuniculus:55 P.jiroveci:55

G1T3A4              	100.00%		L0PAD5              	100.00%
Bootstrap support for G1T3A4 as seed ortholog is 100%.
Bootstrap support for L0PAD5 as seed ortholog is 100%.

Group of orthologs #1387. Best score 54 bits
Score difference with first non-orthologous sequence - O.cuniculus:54 P.jiroveci:54

G1TUC5              	100.00%		L0P8R3              	100.00%
                    	       		L0PB56              	100.00%
Bootstrap support for G1TUC5 as seed ortholog is 100%.
Bootstrap support for L0P8R3 as seed ortholog is 100%.
Bootstrap support for L0PB56 as seed ortholog is 100%.

Group of orthologs #1388. Best score 54 bits
Score difference with first non-orthologous sequence - O.cuniculus:54 P.jiroveci:54

G1T911              	100.00%		L0P9B7              	100.00%
Bootstrap support for G1T911 as seed ortholog is 100%.
Bootstrap support for L0P9B7 as seed ortholog is 100%.

Group of orthologs #1389. Best score 54 bits
Score difference with first non-orthologous sequence - O.cuniculus:54 P.jiroveci:54

G1U5D8              	100.00%		L0P9L4              	100.00%
Bootstrap support for G1U5D8 as seed ortholog is 100%.
Bootstrap support for L0P9L4 as seed ortholog is 100%.

Group of orthologs #1390. Best score 53 bits
Score difference with first non-orthologous sequence - O.cuniculus:53 P.jiroveci:53

G1TPZ4              	100.00%		L0PAQ5              	100.00%
G1TH64              	78.67%		
G1TER3              	38.63%		
Bootstrap support for G1TPZ4 as seed ortholog is 100%.
Bootstrap support for L0PAQ5 as seed ortholog is 100%.

Group of orthologs #1391. Best score 53 bits
Score difference with first non-orthologous sequence - O.cuniculus:53 P.jiroveci:53

G1SM47              	100.00%		L0PF40              	100.00%
Bootstrap support for G1SM47 as seed ortholog is 100%.
Bootstrap support for L0PF40 as seed ortholog is 100%.

Group of orthologs #1392. Best score 53 bits
Score difference with first non-orthologous sequence - O.cuniculus:53 P.jiroveci:53

G1TET7              	100.00%		L0PFR5              	100.00%
Bootstrap support for G1TET7 as seed ortholog is 100%.
Bootstrap support for L0PFR5 as seed ortholog is 100%.

Group of orthologs #1393. Best score 53 bits
Score difference with first non-orthologous sequence - O.cuniculus:53 P.jiroveci:53

G1TU32              	100.00%		L0P9P1              	100.00%
Bootstrap support for G1TU32 as seed ortholog is 100%.
Bootstrap support for L0P9P1 as seed ortholog is 100%.

Group of orthologs #1394. Best score 52 bits
Score difference with first non-orthologous sequence - O.cuniculus:52 P.jiroveci:52

G1TGI6              	100.00%		L0PFQ6              	100.00%
G1TJH8              	100.00%		
G1TQM9              	100.00%		
G1TLT8              	95.12%		
G1TT44              	94.93%		
G1TI36              	94.37%		
G1U1A8              	94.37%		
G1U673              	94.18%		
G1U1G8              	93.84%		
G1TWL4              	93.81%		
G1TNX6              	91.56%		
G1TWC1              	89.31%		
G1SDF8              	78.80%		
G1TKU4              	69.61%		
G1TUN1              	68.67%		
G1TJI7              	58.16%		
G1TVK8              	55.16%		
G1TGK0              	54.60%		
G1TPH8              	50.84%		
G1TXR5              	45.59%		
G1TVU2              	42.21%		
G1TX98              	35.65%		
G1TPP3              	34.52%		
G1TAW1              	20.08%		
G1TW42              	18.85%		
Bootstrap support for G1TGI6 as seed ortholog is 100%.
Bootstrap support for G1TJH8 as seed ortholog is 100%.
Bootstrap support for G1TQM9 as seed ortholog is 100%.
Bootstrap support for L0PFQ6 as seed ortholog is 100%.

Group of orthologs #1395. Best score 52 bits
Score difference with first non-orthologous sequence - O.cuniculus:52 P.jiroveci:52

G1U5P1              	100.00%		L0P994              	100.00%
G1TUY8              	64.42%		
G1TT70              	61.12%		
G1TFI3              	47.28%		
G1U4Y0              	43.16%		
G1TUH8              	41.02%		
G1T4A8              	39.70%		
G1TTL9              	39.37%		
G1TQQ4              	38.55%		
G1U2S2              	37.07%		
G1U5H2              	34.10%		
G1TT20              	31.80%		
G1TC54              	30.48%		
G1TME6              	29.00%		
G1TV72              	28.67%		
G1U580              	28.50%		
G1T2M8              	27.68%		
G1TZ29              	27.35%		
G1TNB9              	24.71%		
G1TMY6              	24.05%		
G1TNA8              	15.82%		
G1SJB5              	15.65%		
Bootstrap support for G1U5P1 as seed ortholog is 100%.
Bootstrap support for L0P994 as seed ortholog is 100%.

Group of orthologs #1396. Best score 52 bits
Score difference with first non-orthologous sequence - O.cuniculus:52 P.jiroveci:52

G1TTB5              	100.00%		L0PB78              	100.00%
G1SXX2              	33.00%		
G1SWW7              	29.00%		
Bootstrap support for G1TTB5 as seed ortholog is 100%.
Bootstrap support for L0PB78 as seed ortholog is 100%.

Group of orthologs #1397. Best score 52 bits
Score difference with first non-orthologous sequence - O.cuniculus:52 P.jiroveci:52

G1U6C6              	100.00%		L0P9H2              	100.00%
G1SMZ1              	90.94%		
Bootstrap support for G1U6C6 as seed ortholog is 100%.
Bootstrap support for L0P9H2 as seed ortholog is 100%.

Group of orthologs #1398. Best score 51 bits
Score difference with first non-orthologous sequence - O.cuniculus:51 P.jiroveci:51

G1TP73              	100.00%		L0PEE9              	100.00%
G1TNZ0              	61.36%		
Bootstrap support for G1TP73 as seed ortholog is 100%.
Bootstrap support for L0PEE9 as seed ortholog is 100%.

Group of orthologs #1399. Best score 51 bits
Score difference with first non-orthologous sequence - O.cuniculus:51 P.jiroveci:51

G1U4V9              	100.00%		L0PFE5              	100.00%
Bootstrap support for G1U4V9 as seed ortholog is 100%.
Bootstrap support for L0PFE5 as seed ortholog is 100%.

Group of orthologs #1400. Best score 50 bits
Score difference with first non-orthologous sequence - O.cuniculus:50 P.jiroveci:50

Q28678              	100.00%		L0PIS5              	100.00%
G1SJA9              	71.03%		
G1U6L6              	62.99%		
Bootstrap support for Q28678 as seed ortholog is 100%.
Bootstrap support for L0PIS5 as seed ortholog is 100%.

Group of orthologs #1401. Best score 50 bits
Score difference with first non-orthologous sequence - O.cuniculus:50 P.jiroveci:50

G1SS49              	100.00%		L0PBL5              	100.00%
G1SWS5              	30.09%		
Bootstrap support for G1SS49 as seed ortholog is 100%.
Bootstrap support for L0PBL5 as seed ortholog is 100%.

Group of orthologs #1402. Best score 50 bits
Score difference with first non-orthologous sequence - O.cuniculus:50 P.jiroveci:50

G1SHS8              	100.00%		L0PHM6              	100.00%
Bootstrap support for G1SHS8 as seed ortholog is 100%.
Bootstrap support for L0PHM6 as seed ortholog is 100%.

Group of orthologs #1403. Best score 50 bits
Score difference with first non-orthologous sequence - O.cuniculus:50 P.jiroveci:50

G1T8A7              	100.00%		L0P7X8              	100.00%
Bootstrap support for G1T8A7 as seed ortholog is 100%.
Bootstrap support for L0P7X8 as seed ortholog is 100%.

Group of orthologs #1404. Best score 50 bits
Score difference with first non-orthologous sequence - O.cuniculus:50 P.jiroveci:50

G1U2N6              	100.00%		L0PAH6              	100.00%
Bootstrap support for G1U2N6 as seed ortholog is 100%.
Bootstrap support for L0PAH6 as seed ortholog is 100%.

Group of orthologs #1405. Best score 49 bits
Score difference with first non-orthologous sequence - O.cuniculus:49 P.jiroveci:49

G1T2L3              	100.00%		L0PCV0              	100.00%
G1TLG9              	100.00%		
Bootstrap support for G1T2L3 as seed ortholog is 100%.
Bootstrap support for G1TLG9 as seed ortholog is 100%.
Bootstrap support for L0PCV0 as seed ortholog is 100%.

Group of orthologs #1406. Best score 49 bits
Score difference with first non-orthologous sequence - O.cuniculus:49 P.jiroveci:49

G1T2V2              	100.00%		L0PFN8              	100.00%
G1TIJ8              	58.36%		
Bootstrap support for G1T2V2 as seed ortholog is 100%.
Bootstrap support for L0PFN8 as seed ortholog is 100%.

Group of orthologs #1407. Best score 49 bits
Score difference with first non-orthologous sequence - O.cuniculus:49 P.jiroveci:49

G1U0V3              	100.00%		L0PH81              	100.00%
                    	       		L0PET0              	89.33%
Bootstrap support for G1U0V3 as seed ortholog is 100%.
Bootstrap support for L0PH81 as seed ortholog is 100%.

Group of orthologs #1408. Best score 49 bits
Score difference with first non-orthologous sequence - O.cuniculus:49 P.jiroveci:49

G1SI76              	100.00%		L0PE69              	100.00%
Bootstrap support for G1SI76 as seed ortholog is 100%.
Bootstrap support for L0PE69 as seed ortholog is 100%.

Group of orthologs #1409. Best score 48 bits
Score difference with first non-orthologous sequence - O.cuniculus:48 P.jiroveci:48

G1TKE3              	100.00%		L0PGX3              	100.00%
G1SKT8              	52.00%		
G1T2C4              	45.43%		
G1TI08              	45.14%		
G1SQR6              	18.00%		
G1SP45              	13.71%		
Bootstrap support for G1TKE3 as seed ortholog is 100%.
Bootstrap support for L0PGX3 as seed ortholog is 100%.

Group of orthologs #1410. Best score 48 bits
Score difference with first non-orthologous sequence - O.cuniculus:48 P.jiroveci:48

G1SST3              	100.00%		L0P882              	100.00%
Bootstrap support for G1SST3 as seed ortholog is 100%.
Bootstrap support for L0P882 as seed ortholog is 100%.

Group of orthologs #1411. Best score 48 bits
Score difference with first non-orthologous sequence - O.cuniculus:48 P.jiroveci:48

G1T4Y7              	100.00%		L0P9X6              	100.00%
Bootstrap support for G1T4Y7 as seed ortholog is 100%.
Bootstrap support for L0P9X6 as seed ortholog is 100%.

Group of orthologs #1412. Best score 48 bits
Score difference with first non-orthologous sequence - O.cuniculus:48 P.jiroveci:48

G1T0C5              	100.00%		L0PGZ4              	100.00%
Bootstrap support for G1T0C5 as seed ortholog is 100%.
Bootstrap support for L0PGZ4 as seed ortholog is 100%.

Group of orthologs #1413. Best score 47 bits
Score difference with first non-orthologous sequence - O.cuniculus:47 P.jiroveci:47

G1TSM3              	11.81%		L0P9T4              	100.00%
G1TBH3              	100.00%		L0PFA0              	100.00%
G1T8V4              	10.12%		
Bootstrap support for G1TBH3 as seed ortholog is 100%.
Bootstrap support for L0P9T4 as seed ortholog is 100%.
Bootstrap support for L0PFA0 as seed ortholog is 100%.

Group of orthologs #1414. Best score 47 bits
Score difference with first non-orthologous sequence - O.cuniculus:47 P.jiroveci:47

G1T1J3              	100.00%		L0PB71              	100.00%
G1TYQ9              	90.89%		
G1TV88              	89.68%		
Bootstrap support for G1T1J3 as seed ortholog is 100%.
Bootstrap support for L0PB71 as seed ortholog is 100%.

Group of orthologs #1415. Best score 47 bits
Score difference with first non-orthologous sequence - O.cuniculus:47 P.jiroveci:47

G1T3E8              	100.00%		L0P9W9              	100.00%
G1TQM5              	68.93%		
G1SLR0              	55.14%		
Bootstrap support for G1T3E8 as seed ortholog is 100%.
Bootstrap support for L0P9W9 as seed ortholog is 100%.

Group of orthologs #1416. Best score 47 bits
Score difference with first non-orthologous sequence - O.cuniculus:47 P.jiroveci:47

G1SDL5              	100.00%		L0PA08              	100.00%
Bootstrap support for G1SDL5 as seed ortholog is 100%.
Bootstrap support for L0PA08 as seed ortholog is 100%.

Group of orthologs #1417. Best score 45 bits
Score difference with first non-orthologous sequence - O.cuniculus:45 P.jiroveci:45

G1SI75              	100.00%		L0PGA3              	100.00%
Bootstrap support for G1SI75 as seed ortholog is 100%.
Bootstrap support for L0PGA3 as seed ortholog is 100%.

Group of orthologs #1418. Best score 45 bits
Score difference with first non-orthologous sequence - O.cuniculus:3 P.jiroveci:45

G1SW27              	100.00%		L0PGI8              	100.00%
Bootstrap support for G1SW27 as seed ortholog is 55%.
Alternative seed ortholog is G1TZH0 (3 bits away from this cluster)
Bootstrap support for L0PGI8 as seed ortholog is 100%.

Group of orthologs #1419. Best score 45 bits
Score difference with first non-orthologous sequence - O.cuniculus:45 P.jiroveci:45

G1TCH7              	100.00%		L0PFI4              	100.00%
Bootstrap support for G1TCH7 as seed ortholog is 100%.
Bootstrap support for L0PFI4 as seed ortholog is 100%.

Group of orthologs #1420. Best score 44 bits
Score difference with first non-orthologous sequence - O.cuniculus:44 P.jiroveci:44

G1T5B0              	100.00%		L0P875              	100.00%
Bootstrap support for G1T5B0 as seed ortholog is 100%.
Bootstrap support for L0P875 as seed ortholog is 100%.

Group of orthologs #1421. Best score 44 bits
Score difference with first non-orthologous sequence - O.cuniculus:44 P.jiroveci:44

G1T3K3              	100.00%		L0PD94              	100.00%
Bootstrap support for G1T3K3 as seed ortholog is 100%.
Bootstrap support for L0PD94 as seed ortholog is 100%.

Group of orthologs #1422. Best score 44 bits
Score difference with first non-orthologous sequence - O.cuniculus:44 P.jiroveci:44

G1T7G2              	100.00%		L0PG70              	100.00%
Bootstrap support for G1T7G2 as seed ortholog is 100%.
Bootstrap support for L0PG70 as seed ortholog is 100%.

Group of orthologs #1423. Best score 44 bits
Score difference with first non-orthologous sequence - O.cuniculus:44 P.jiroveci:44

G1T8Y5              	100.00%		L0PFL4              	100.00%
Bootstrap support for G1T8Y5 as seed ortholog is 100%.
Bootstrap support for L0PFL4 as seed ortholog is 100%.

Group of orthologs #1424. Best score 44 bits
Score difference with first non-orthologous sequence - O.cuniculus:44 P.jiroveci:44

G1TN42              	100.00%		L0PAV1              	100.00%
Bootstrap support for G1TN42 as seed ortholog is 100%.
Bootstrap support for L0PAV1 as seed ortholog is 100%.

Group of orthologs #1425. Best score 43 bits
Score difference with first non-orthologous sequence - O.cuniculus:43 P.jiroveci:43

G1TCA3              	100.00%		L0PFX7              	100.00%
G1U942              	43.61%		
Bootstrap support for G1TCA3 as seed ortholog is 100%.
Bootstrap support for L0PFX7 as seed ortholog is 100%.

Group of orthologs #1426. Best score 43 bits
Score difference with first non-orthologous sequence - O.cuniculus:43 P.jiroveci:43

G1TRJ9              	100.00%		L0P8U4              	100.00%
Bootstrap support for G1TRJ9 as seed ortholog is 100%.
Bootstrap support for L0P8U4 as seed ortholog is 100%.

Group of orthologs #1427. Best score 42 bits
Score difference with first non-orthologous sequence - O.cuniculus:42 P.jiroveci:42

G1T942              	100.00%		L0PA84              	100.00%
                    	       		L0PGH1              	73.78%
Bootstrap support for G1T942 as seed ortholog is 100%.
Bootstrap support for L0PA84 as seed ortholog is 100%.

Group of orthologs #1428. Best score 41 bits
Score difference with first non-orthologous sequence - O.cuniculus:41 P.jiroveci:41

G1SDC7              	100.00%		L0P8L1              	100.00%
                    	       		L0P714              	78.12%
Bootstrap support for G1SDC7 as seed ortholog is 100%.
Bootstrap support for L0P8L1 as seed ortholog is 100%.