###################################
123 groups of orthologs
159 in-paralogs from N.parisii
161 in-paralogs from Synechocystis.sp.
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 598 bits
Score difference with first non-orthologous sequence - N.parisii:598 Synechocystis.sp.:598

I3EL83              	100.00%		P74361              	100.00%
                    	       		P74459              	47.09%
                    	       		Q55662              	12.47%
Bootstrap support for I3EL83 as seed ortholog is 100%.
Bootstrap support for P74361 as seed ortholog is 100%.

Group of orthologs #2. Best score 559 bits
Score difference with first non-orthologous sequence - N.parisii:559 Synechocystis.sp.:446

I3EQN8              	100.00%		Q55522              	100.00%
Bootstrap support for I3EQN8 as seed ortholog is 100%.
Bootstrap support for Q55522 as seed ortholog is 100%.

Group of orthologs #3. Best score 494 bits
Score difference with first non-orthologous sequence - N.parisii:38 Synechocystis.sp.:494

I3ESJ3              	100.00%		P22358              	100.00%
                    	       		P73098              	37.08%
                    	       		Q55154              	24.76%
Bootstrap support for I3ESJ3 as seed ortholog is 86%.
Bootstrap support for P22358 as seed ortholog is 100%.

Group of orthologs #4. Best score 423 bits
Score difference with first non-orthologous sequence - N.parisii:423 Synechocystis.sp.:423

I3ESG5              	100.00%		P74423              	100.00%
Bootstrap support for I3ESG5 as seed ortholog is 100%.
Bootstrap support for P74423 as seed ortholog is 100%.

Group of orthologs #5. Best score 387 bits
Score difference with first non-orthologous sequence - N.parisii:387 Synechocystis.sp.:387

I3EPQ0              	100.00%		Q55806              	100.00%
Bootstrap support for I3EPQ0 as seed ortholog is 100%.
Bootstrap support for Q55806 as seed ortholog is 100%.

Group of orthologs #6. Best score 384 bits
Score difference with first non-orthologous sequence - N.parisii:384 Synechocystis.sp.:384

I3ELV0              	100.00%		P72720              	100.00%
Bootstrap support for I3ELV0 as seed ortholog is 100%.
Bootstrap support for P72720 as seed ortholog is 100%.

Group of orthologs #7. Best score 355 bits
Score difference with first non-orthologous sequence - N.parisii:355 Synechocystis.sp.:355

I3ESI0              	100.00%		P74208              	100.00%
Bootstrap support for I3ESI0 as seed ortholog is 100%.
Bootstrap support for P74208 as seed ortholog is 100%.

Group of orthologs #8. Best score 335 bits
Score difference with first non-orthologous sequence - N.parisii:335 Synechocystis.sp.:335

I3ELR5              	100.00%		P73443              	100.00%
Bootstrap support for I3ELR5 as seed ortholog is 100%.
Bootstrap support for P73443 as seed ortholog is 100%.

Group of orthologs #9. Best score 319 bits
Score difference with first non-orthologous sequence - N.parisii:319 Synechocystis.sp.:319

I3ERJ9              	100.00%		P72871              	100.00%
Bootstrap support for I3ERJ9 as seed ortholog is 100%.
Bootstrap support for P72871 as seed ortholog is 100%.

Group of orthologs #10. Best score 318 bits
Score difference with first non-orthologous sequence - N.parisii:318 Synechocystis.sp.:59

I3ET30              	100.00%		P49433              	100.00%
Bootstrap support for I3ET30 as seed ortholog is 100%.
Bootstrap support for P49433 as seed ortholog is 94%.

Group of orthologs #11. Best score 309 bits
Score difference with first non-orthologous sequence - N.parisii:309 Synechocystis.sp.:217

I3ELS5              	100.00%		P73282              	100.00%
Bootstrap support for I3ELS5 as seed ortholog is 100%.
Bootstrap support for P73282 as seed ortholog is 99%.

Group of orthologs #12. Best score 302 bits
Score difference with first non-orthologous sequence - N.parisii:302 Synechocystis.sp.:302

I3EQ75              	100.00%		P74008              	100.00%
Bootstrap support for I3EQ75 as seed ortholog is 100%.
Bootstrap support for P74008 as seed ortholog is 100%.

Group of orthologs #13. Best score 300 bits
Score difference with first non-orthologous sequence - N.parisii:300 Synechocystis.sp.:300

I3ER21              	100.00%		P52208              	100.00%
Bootstrap support for I3ER21 as seed ortholog is 100%.
Bootstrap support for P52208 as seed ortholog is 100%.

Group of orthologs #14. Best score 292 bits
Score difference with first non-orthologous sequence - N.parisii:292 Synechocystis.sp.:49

I3EMC0              	100.00%		Q6ZEV8              	100.00%
Bootstrap support for I3EMC0 as seed ortholog is 100%.
Bootstrap support for Q6ZEV8 as seed ortholog is 91%.

Group of orthologs #15. Best score 291 bits
Score difference with first non-orthologous sequence - N.parisii:291 Synechocystis.sp.:291

I3ELA1              	100.00%		P73505              	100.00%
Bootstrap support for I3ELA1 as seed ortholog is 100%.
Bootstrap support for P73505 as seed ortholog is 100%.

Group of orthologs #16. Best score 270 bits
Score difference with first non-orthologous sequence - N.parisii:270 Synechocystis.sp.:270

I3ENQ6              	100.00%		P74686              	100.00%
I3EQG2              	8.60%		
Bootstrap support for I3ENQ6 as seed ortholog is 100%.
Bootstrap support for P74686 as seed ortholog is 100%.

Group of orthologs #17. Best score 268 bits
Score difference with first non-orthologous sequence - N.parisii:268 Synechocystis.sp.:268

I3EMK6              	100.00%		P77962              	100.00%
Bootstrap support for I3EMK6 as seed ortholog is 100%.
Bootstrap support for P77962 as seed ortholog is 100%.

Group of orthologs #18. Best score 265 bits
Score difference with first non-orthologous sequence - N.parisii:265 Synechocystis.sp.:265

I3EL77              	100.00%		P74507              	100.00%
Bootstrap support for I3EL77 as seed ortholog is 100%.
Bootstrap support for P74507 as seed ortholog is 100%.

Group of orthologs #19. Best score 260 bits
Score difference with first non-orthologous sequence - N.parisii:260 Synechocystis.sp.:260

I3EN58              	100.00%		P73971              	100.00%
Bootstrap support for I3EN58 as seed ortholog is 100%.
Bootstrap support for P73971 as seed ortholog is 100%.

Group of orthologs #20. Best score 258 bits
Score difference with first non-orthologous sequence - N.parisii:258 Synechocystis.sp.:258

I3ES32              	100.00%		Q55404              	100.00%
Bootstrap support for I3ES32 as seed ortholog is 100%.
Bootstrap support for Q55404 as seed ortholog is 100%.

Group of orthologs #21. Best score 257 bits
Score difference with first non-orthologous sequence - N.parisii:257 Synechocystis.sp.:257

I3EM45              	100.00%		P73886              	100.00%
Bootstrap support for I3EM45 as seed ortholog is 100%.
Bootstrap support for P73886 as seed ortholog is 100%.

Group of orthologs #22. Best score 250 bits
Score difference with first non-orthologous sequence - N.parisii:250 Synechocystis.sp.:250

I3ENI5              	100.00%		P74240              	100.00%
Bootstrap support for I3ENI5 as seed ortholog is 100%.
Bootstrap support for P74240 as seed ortholog is 100%.

Group of orthologs #23. Best score 248 bits
Score difference with first non-orthologous sequence - N.parisii:65 Synechocystis.sp.:248

I3ERB3              	100.00%		P73340              	100.00%
Bootstrap support for I3ERB3 as seed ortholog is 98%.
Bootstrap support for P73340 as seed ortholog is 100%.

Group of orthologs #24. Best score 246 bits
Score difference with first non-orthologous sequence - N.parisii:246 Synechocystis.sp.:246

I3EL43              	100.00%		P74330              	100.00%
Bootstrap support for I3EL43 as seed ortholog is 100%.
Bootstrap support for P74330 as seed ortholog is 100%.

Group of orthologs #25. Best score 245 bits
Score difference with first non-orthologous sequence - N.parisii:245 Synechocystis.sp.:245

I3EMJ2              	100.00%		P73405              	100.00%
Bootstrap support for I3EMJ2 as seed ortholog is 100%.
Bootstrap support for P73405 as seed ortholog is 100%.

Group of orthologs #26. Best score 237 bits
Score difference with first non-orthologous sequence - N.parisii:5 Synechocystis.sp.:177

I3EN30              	100.00%		Q55804              	100.00%
I3ER28              	100.00%		
Bootstrap support for I3EN30 as seed ortholog is 56%.
Alternative seed ortholog is I3EMF3 (5 bits away from this cluster)
Bootstrap support for I3ER28 as seed ortholog is 56%.
Alternative seed ortholog is I3EMF3 (5 bits away from this cluster)
Bootstrap support for Q55804 as seed ortholog is 100%.

Group of orthologs #27. Best score 232 bits
Score difference with first non-orthologous sequence - N.parisii:232 Synechocystis.sp.:232

I3ES59              	100.00%		P74552              	100.00%
Bootstrap support for I3ES59 as seed ortholog is 100%.
Bootstrap support for P74552 as seed ortholog is 100%.

Group of orthologs #28. Best score 228 bits
Score difference with first non-orthologous sequence - N.parisii:228 Synechocystis.sp.:228

I3ENC5              	100.00%		Q55863              	100.00%
                    	       		P73534              	21.35%
Bootstrap support for I3ENC5 as seed ortholog is 100%.
Bootstrap support for Q55863 as seed ortholog is 100%.

Group of orthologs #29. Best score 223 bits
Score difference with first non-orthologous sequence - N.parisii:223 Synechocystis.sp.:223

I3ESM3              	100.00%		P77965              	100.00%
I3ELM9              	17.33%		
I3EP53              	6.07%		
Bootstrap support for I3ESM3 as seed ortholog is 100%.
Bootstrap support for P77965 as seed ortholog is 100%.

Group of orthologs #30. Best score 205 bits
Score difference with first non-orthologous sequence - N.parisii:205 Synechocystis.sp.:205

I3ET40              	100.00%		P73179              	100.00%
I3EQX5              	22.63%		Q55700              	51.38%
I3ESD8              	18.80%		P72991              	38.90%
I3ELP6              	15.15%		P73437              	28.81%
I3EPK9              	14.42%		
I3ENQ7              	13.50%		
Bootstrap support for I3ET40 as seed ortholog is 100%.
Bootstrap support for P73179 as seed ortholog is 100%.

Group of orthologs #31. Best score 205 bits
Score difference with first non-orthologous sequence - N.parisii:98 Synechocystis.sp.:72

I3ELA0              	100.00%		P74214              	100.00%
Bootstrap support for I3ELA0 as seed ortholog is 99%.
Bootstrap support for P74214 as seed ortholog is 96%.

Group of orthologs #32. Best score 203 bits
Score difference with first non-orthologous sequence - N.parisii:203 Synechocystis.sp.:203

I3EM49              	100.00%		P73201              	100.00%
Bootstrap support for I3EM49 as seed ortholog is 100%.
Bootstrap support for P73201 as seed ortholog is 100%.

Group of orthologs #33. Best score 202 bits
Score difference with first non-orthologous sequence - N.parisii:202 Synechocystis.sp.:202

I3ENH8              	100.00%		P74257              	100.00%
Bootstrap support for I3ENH8 as seed ortholog is 100%.
Bootstrap support for P74257 as seed ortholog is 100%.

Group of orthologs #34. Best score 188 bits
Score difference with first non-orthologous sequence - N.parisii:188 Synechocystis.sp.:188

I3EML5              	100.00%		P74258              	100.00%
Bootstrap support for I3EML5 as seed ortholog is 100%.
Bootstrap support for P74258 as seed ortholog is 100%.

Group of orthologs #35. Best score 181 bits
Score difference with first non-orthologous sequence - N.parisii:181 Synechocystis.sp.:41

I3ERD8              	100.00%		P74228              	100.00%
                    	       		P28371              	43.33%
                    	       		Q55421              	15.38%
Bootstrap support for I3ERD8 as seed ortholog is 100%.
Bootstrap support for P74228 as seed ortholog is 79%.

Group of orthologs #36. Best score 170 bits
Score difference with first non-orthologous sequence - N.parisii:170 Synechocystis.sp.:170

I3EQX4              	100.00%		Q55486              	100.00%
Bootstrap support for I3EQX4 as seed ortholog is 100%.
Bootstrap support for Q55486 as seed ortholog is 100%.

Group of orthologs #37. Best score 168 bits
Score difference with first non-orthologous sequence - N.parisii:168 Synechocystis.sp.:168

I3ER81              	100.00%		P74702              	100.00%
Bootstrap support for I3ER81 as seed ortholog is 100%.
Bootstrap support for P74702 as seed ortholog is 100%.

Group of orthologs #38. Best score 162 bits
Score difference with first non-orthologous sequence - N.parisii:162 Synechocystis.sp.:53

I3EPA9              	100.00%		P73769              	100.00%
Bootstrap support for I3EPA9 as seed ortholog is 100%.
Bootstrap support for P73769 as seed ortholog is 87%.

Group of orthologs #39. Best score 160 bits
Score difference with first non-orthologous sequence - N.parisii:160 Synechocystis.sp.:160

I3ESL9              	100.00%		P74490              	100.00%
Bootstrap support for I3ESL9 as seed ortholog is 100%.
Bootstrap support for P74490 as seed ortholog is 100%.

Group of orthologs #40. Best score 156 bits
Score difference with first non-orthologous sequence - N.parisii:156 Synechocystis.sp.:156

I3ERE2              	100.00%		Q55729              	100.00%
Bootstrap support for I3ERE2 as seed ortholog is 100%.
Bootstrap support for Q55729 as seed ortholog is 100%.

Group of orthologs #41. Best score 151 bits
Score difference with first non-orthologous sequence - N.parisii:151 Synechocystis.sp.:151

I3ESE3              	100.00%		P26527              	100.00%
Bootstrap support for I3ESE3 as seed ortholog is 100%.
Bootstrap support for P26527 as seed ortholog is 100%.

Group of orthologs #42. Best score 149 bits
Score difference with first non-orthologous sequence - N.parisii:149 Synechocystis.sp.:149

I3ERL9              	100.00%		P52276              	100.00%
Bootstrap support for I3ERL9 as seed ortholog is 100%.
Bootstrap support for P52276 as seed ortholog is 100%.

Group of orthologs #43. Best score 147 bits
Score difference with first non-orthologous sequence - N.parisii:147 Synechocystis.sp.:147

I3EMI5              	100.00%		P73004              	100.00%
Bootstrap support for I3EMI5 as seed ortholog is 100%.
Bootstrap support for P73004 as seed ortholog is 100%.

Group of orthologs #44. Best score 142 bits
Score difference with first non-orthologous sequence - N.parisii:142 Synechocystis.sp.:142

I3EQ49              	100.00%		P74421              	100.00%
Bootstrap support for I3EQ49 as seed ortholog is 100%.
Bootstrap support for P74421 as seed ortholog is 100%.

Group of orthologs #45. Best score 138 bits
Score difference with first non-orthologous sequence - N.parisii:30 Synechocystis.sp.:83

I3EPS6              	100.00%		P73789              	100.00%
Bootstrap support for I3EPS6 as seed ortholog is 85%.
Bootstrap support for P73789 as seed ortholog is 99%.

Group of orthologs #46. Best score 137 bits
Score difference with first non-orthologous sequence - N.parisii:46 Synechocystis.sp.:137

I3EPF5              	100.00%		P73241              	100.00%
                    	       		P74512              	27.63%
                    	       		Q59997              	15.91%
                    	       		Q59998              	10.27%
Bootstrap support for I3EPF5 as seed ortholog is 83%.
Bootstrap support for P73241 as seed ortholog is 100%.

Group of orthologs #47. Best score 137 bits
Score difference with first non-orthologous sequence - N.parisii:137 Synechocystis.sp.:137

I3EP25              	100.00%		P74494              	100.00%
Bootstrap support for I3EP25 as seed ortholog is 100%.
Bootstrap support for P74494 as seed ortholog is 100%.

Group of orthologs #48. Best score 136 bits
Score difference with first non-orthologous sequence - N.parisii:136 Synechocystis.sp.:11

I3EMJ5              	100.00%		Q55689              	100.00%
Bootstrap support for I3EMJ5 as seed ortholog is 100%.
Bootstrap support for Q55689 as seed ortholog is 60%.
Alternative seed ortholog is P74285 (11 bits away from this cluster)

Group of orthologs #49. Best score 136 bits
Score difference with first non-orthologous sequence - N.parisii:136 Synechocystis.sp.:136

I3ESW9              	100.00%		P73851              	100.00%
Bootstrap support for I3ESW9 as seed ortholog is 100%.
Bootstrap support for P73851 as seed ortholog is 100%.

Group of orthologs #50. Best score 135 bits
Score difference with first non-orthologous sequence - N.parisii:135 Synechocystis.sp.:135

I3EMR1              	100.00%		P74770              	100.00%
Bootstrap support for I3EMR1 as seed ortholog is 100%.
Bootstrap support for P74770 as seed ortholog is 100%.

Group of orthologs #51. Best score 134 bits
Score difference with first non-orthologous sequence - N.parisii:134 Synechocystis.sp.:134

I3EPM7              	100.00%		P72689              	100.00%
Bootstrap support for I3EPM7 as seed ortholog is 100%.
Bootstrap support for P72689 as seed ortholog is 100%.

Group of orthologs #52. Best score 134 bits
Score difference with first non-orthologous sequence - N.parisii:134 Synechocystis.sp.:134

I3ESC1              	100.00%		P77966              	100.00%
Bootstrap support for I3ESC1 as seed ortholog is 100%.
Bootstrap support for P77966 as seed ortholog is 100%.

Group of orthologs #53. Best score 132 bits
Score difference with first non-orthologous sequence - N.parisii:28 Synechocystis.sp.:132

I3EMB8              	100.00%		Q59999              	100.00%
                    	       		P74062              	51.50%
                    	       		P37367              	24.87%
Bootstrap support for I3EMB8 as seed ortholog is 69%.
Alternative seed ortholog is I3ER00 (28 bits away from this cluster)
Bootstrap support for Q59999 as seed ortholog is 100%.

Group of orthologs #54. Best score 131 bits
Score difference with first non-orthologous sequence - N.parisii:131 Synechocystis.sp.:131

I3ERN6              	100.00%		P72943              	100.00%
Bootstrap support for I3ERN6 as seed ortholog is 100%.
Bootstrap support for P72943 as seed ortholog is 100%.

Group of orthologs #55. Best score 129 bits
Score difference with first non-orthologous sequence - N.parisii:33 Synechocystis.sp.:129

I3EQN2              	100.00%		P74227              	100.00%
I3EMS2              	5.71%		
Bootstrap support for I3EQN2 as seed ortholog is 77%.
Bootstrap support for P74227 as seed ortholog is 100%.

Group of orthologs #56. Best score 129 bits
Score difference with first non-orthologous sequence - N.parisii:129 Synechocystis.sp.:129

I3ET45              	100.00%		Q55505              	100.00%
Bootstrap support for I3ET45 as seed ortholog is 100%.
Bootstrap support for Q55505 as seed ortholog is 100%.

Group of orthologs #57. Best score 128 bits
Score difference with first non-orthologous sequence - N.parisii:128 Synechocystis.sp.:128

I3ET35              	100.00%		P74308              	100.00%
Bootstrap support for I3ET35 as seed ortholog is 100%.
Bootstrap support for P74308 as seed ortholog is 100%.

Group of orthologs #58. Best score 127 bits
Score difference with first non-orthologous sequence - N.parisii:127 Synechocystis.sp.:127

I3ENB3              	100.00%		Q59994              	100.00%
Bootstrap support for I3ENB3 as seed ortholog is 100%.
Bootstrap support for Q59994 as seed ortholog is 100%.

Group of orthologs #59. Best score 122 bits
Score difference with first non-orthologous sequence - N.parisii:122 Synechocystis.sp.:122

I3ENE4              	100.00%		P27179              	100.00%
Bootstrap support for I3ENE4 as seed ortholog is 100%.
Bootstrap support for P27179 as seed ortholog is 100%.

Group of orthologs #60. Best score 117 bits
Score difference with first non-orthologous sequence - N.parisii:117 Synechocystis.sp.:117

I3ER98              	100.00%		Q55187              	100.00%
Bootstrap support for I3ER98 as seed ortholog is 100%.
Bootstrap support for Q55187 as seed ortholog is 100%.

Group of orthologs #61. Best score 116 bits
Score difference with first non-orthologous sequence - N.parisii:27 Synechocystis.sp.:62

I3EPN5              	100.00%		P53383              	100.00%
Bootstrap support for I3EPN5 as seed ortholog is 82%.
Bootstrap support for P53383 as seed ortholog is 98%.

Group of orthologs #62. Best score 115 bits
Score difference with first non-orthologous sequence - N.parisii:115 Synechocystis.sp.:115

I3EQL1              	100.00%		P72648              	100.00%
Bootstrap support for I3EQL1 as seed ortholog is 100%.
Bootstrap support for P72648 as seed ortholog is 100%.

Group of orthologs #63. Best score 115 bits
Score difference with first non-orthologous sequence - N.parisii:115 Synechocystis.sp.:115

I3ET23              	100.00%		P73810              	100.00%
Bootstrap support for I3ET23 as seed ortholog is 100%.
Bootstrap support for P73810 as seed ortholog is 100%.

Group of orthologs #64. Best score 114 bits
Score difference with first non-orthologous sequence - N.parisii:114 Synechocystis.sp.:114

I3ERT4              	100.00%		P74181              	100.00%
Bootstrap support for I3ERT4 as seed ortholog is 100%.
Bootstrap support for P74181 as seed ortholog is 100%.

Group of orthologs #65. Best score 112 bits
Score difference with first non-orthologous sequence - N.parisii:112 Synechocystis.sp.:112

I3EQR0              	100.00%		P72666              	100.00%
Bootstrap support for I3EQR0 as seed ortholog is 100%.
Bootstrap support for P72666 as seed ortholog is 100%.

Group of orthologs #66. Best score 112 bits
Score difference with first non-orthologous sequence - N.parisii:112 Synechocystis.sp.:112

I3ESQ9              	100.00%		P52983              	100.00%
Bootstrap support for I3ESQ9 as seed ortholog is 100%.
Bootstrap support for P52983 as seed ortholog is 100%.

Group of orthologs #67. Best score 109 bits
Score difference with first non-orthologous sequence - N.parisii:109 Synechocystis.sp.:109

I3EMJ8              	100.00%		P73059              	100.00%
                    	       		P72740              	8.78%
Bootstrap support for I3EMJ8 as seed ortholog is 100%.
Bootstrap support for P73059 as seed ortholog is 100%.

Group of orthologs #68. Best score 109 bits
Score difference with first non-orthologous sequence - N.parisii:109 Synechocystis.sp.:109

I3ER23              	100.00%		P73015              	100.00%
Bootstrap support for I3ER23 as seed ortholog is 100%.
Bootstrap support for P73015 as seed ortholog is 100%.

Group of orthologs #69. Best score 108 bits
Score difference with first non-orthologous sequence - N.parisii:108 Synechocystis.sp.:108

I3EM76              	100.00%		P22034              	100.00%
I3EP71              	100.00%		Q05972              	100.00%
I3EPJ6              	13.10%		
I3EQY1              	12.07%		
I3EMV8              	10.71%		
I3ENX8              	9.91%		
I3ERT3              	7.06%		
Bootstrap support for I3EM76 as seed ortholog is 100%.
Bootstrap support for I3EP71 as seed ortholog is 100%.
Bootstrap support for P22034 as seed ortholog is 100%.
Bootstrap support for Q05972 as seed ortholog is 100%.

Group of orthologs #70. Best score 102 bits
Score difference with first non-orthologous sequence - N.parisii:33 Synechocystis.sp.:102

I3ESM7              	100.00%		P73942              	100.00%
Bootstrap support for I3ESM7 as seed ortholog is 86%.
Bootstrap support for P73942 as seed ortholog is 100%.

Group of orthologs #71. Best score 101 bits
Score difference with first non-orthologous sequence - N.parisii:101 Synechocystis.sp.:101

I3EMD7              	100.00%		P74346              	100.00%
Bootstrap support for I3EMD7 as seed ortholog is 100%.
Bootstrap support for P74346 as seed ortholog is 100%.

Group of orthologs #72. Best score 99 bits
Score difference with first non-orthologous sequence - N.parisii:99 Synechocystis.sp.:99

I3EPT8              	100.00%		P50027              	100.00%
                    	       		P73097              	20.55%
Bootstrap support for I3EPT8 as seed ortholog is 100%.
Bootstrap support for P50027 as seed ortholog is 100%.

Group of orthologs #73. Best score 96 bits
Score difference with first non-orthologous sequence - N.parisii:96 Synechocystis.sp.:96

I3ES99              	100.00%		P72702              	100.00%
I3ELC9              	32.39%		
Bootstrap support for I3ES99 as seed ortholog is 100%.
Bootstrap support for P72702 as seed ortholog is 100%.

Group of orthologs #74. Best score 96 bits
Score difference with first non-orthologous sequence - N.parisii:96 Synechocystis.sp.:96

I3EQW4              	100.00%		P73411              	100.00%
Bootstrap support for I3EQW4 as seed ortholog is 100%.
Bootstrap support for P73411 as seed ortholog is 100%.

Group of orthologs #75. Best score 95 bits
Score difference with first non-orthologous sequence - N.parisii:95 Synechocystis.sp.:95

I3ELK8              	100.00%		P73302              	100.00%
                    	       		P72641              	15.22%
Bootstrap support for I3ELK8 as seed ortholog is 100%.
Bootstrap support for P73302 as seed ortholog is 100%.

Group of orthologs #76. Best score 94 bits
Score difference with first non-orthologous sequence - N.parisii:94 Synechocystis.sp.:94

I3EP93              	100.00%		P73317              	100.00%
Bootstrap support for I3EP93 as seed ortholog is 100%.
Bootstrap support for P73317 as seed ortholog is 100%.

Group of orthologs #77. Best score 93 bits
Score difference with first non-orthologous sequence - N.parisii:93 Synechocystis.sp.:93

I3ERS7              	100.00%		Q6YRV7              	100.00%
I3EPU3              	12.90%		
I3EN52              	12.79%		
I3ET49              	6.78%		
Bootstrap support for I3ERS7 as seed ortholog is 100%.
Bootstrap support for Q6YRV7 as seed ortholog is 100%.

Group of orthologs #78. Best score 93 bits
Score difference with first non-orthologous sequence - N.parisii:93 Synechocystis.sp.:27

I3ET21              	100.00%		P74336              	100.00%
Bootstrap support for I3ET21 as seed ortholog is 100%.
Bootstrap support for P74336 as seed ortholog is 77%.

Group of orthologs #79. Best score 91 bits
Score difference with first non-orthologous sequence - N.parisii:91 Synechocystis.sp.:91

I3EM13              	100.00%		P53579              	100.00%
                    	       		P53580              	57.21%
                    	       		P53581              	26.48%
Bootstrap support for I3EM13 as seed ortholog is 100%.
Bootstrap support for P53579 as seed ortholog is 100%.

Group of orthologs #80. Best score 91 bits
Score difference with first non-orthologous sequence - N.parisii:91 Synechocystis.sp.:91

I3EST1              	100.00%		P74696              	100.00%
Bootstrap support for I3EST1 as seed ortholog is 100%.
Bootstrap support for P74696 as seed ortholog is 100%.

Group of orthologs #81. Best score 90 bits
Score difference with first non-orthologous sequence - N.parisii:90 Synechocystis.sp.:90

I3EQE0              	100.00%		Q55174              	100.00%
I3EQL2              	23.01%		Q55589              	32.48%
I3EL32              	10.22%		
Bootstrap support for I3EQE0 as seed ortholog is 100%.
Bootstrap support for Q55174 as seed ortholog is 100%.

Group of orthologs #82. Best score 88 bits
Score difference with first non-orthologous sequence - N.parisii:88 Synechocystis.sp.:88

I3ESI9              	100.00%		P74034              	100.00%
Bootstrap support for I3ESI9 as seed ortholog is 100%.
Bootstrap support for P74034 as seed ortholog is 100%.

Group of orthologs #83. Best score 87 bits
Score difference with first non-orthologous sequence - N.parisii:87 Synechocystis.sp.:87

I3EL51              	100.00%		Q55470              	100.00%
I3EQ55              	24.66%		
Bootstrap support for I3EL51 as seed ortholog is 100%.
Bootstrap support for Q55470 as seed ortholog is 100%.

Group of orthologs #84. Best score 83 bits
Score difference with first non-orthologous sequence - N.parisii:83 Synechocystis.sp.:83

I3EN55              	100.00%		P73056              	100.00%
Bootstrap support for I3EN55 as seed ortholog is 100%.
Bootstrap support for P73056 as seed ortholog is 100%.

Group of orthologs #85. Best score 82 bits
Score difference with first non-orthologous sequence - N.parisii:82 Synechocystis.sp.:82

I3ELQ1              	100.00%		P74732              	100.00%
Bootstrap support for I3ELQ1 as seed ortholog is 100%.
Bootstrap support for P74732 as seed ortholog is 100%.

Group of orthologs #86. Best score 78 bits
Score difference with first non-orthologous sequence - N.parisii:16 Synechocystis.sp.:78

I3EMN0              	100.00%		P74297              	100.00%
Bootstrap support for I3EMN0 as seed ortholog is 66%.
Alternative seed ortholog is I3EQ14 (16 bits away from this cluster)
Bootstrap support for P74297 as seed ortholog is 100%.

Group of orthologs #87. Best score 75 bits
Score difference with first non-orthologous sequence - N.parisii:75 Synechocystis.sp.:75

I3EN34              	100.00%		P73310              	100.00%
Bootstrap support for I3EN34 as seed ortholog is 100%.
Bootstrap support for P73310 as seed ortholog is 100%.

Group of orthologs #88. Best score 75 bits
Score difference with first non-orthologous sequence - N.parisii:75 Synechocystis.sp.:75

I3EPA1              	100.00%		P73335              	100.00%
Bootstrap support for I3EPA1 as seed ortholog is 100%.
Bootstrap support for P73335 as seed ortholog is 100%.

Group of orthologs #89. Best score 74 bits
Score difference with first non-orthologous sequence - N.parisii:74 Synechocystis.sp.:74

I3EMG1              	100.00%		P73220              	100.00%
                    	       		P73758              	100.00%
                    	       		P74317              	23.20%
Bootstrap support for I3EMG1 as seed ortholog is 100%.
Bootstrap support for P73220 as seed ortholog is 100%.
Bootstrap support for P73758 as seed ortholog is 100%.

Group of orthologs #90. Best score 74 bits
Score difference with first non-orthologous sequence - N.parisii:26 Synechocystis.sp.:74

I3ER84              	100.00%		P73594              	100.00%
                    	       		P73595              	24.22%
Bootstrap support for I3ER84 as seed ortholog is 73%.
Alternative seed ortholog is I3EL74 (26 bits away from this cluster)
Bootstrap support for P73594 as seed ortholog is 100%.

Group of orthologs #91. Best score 72 bits
Score difference with first non-orthologous sequence - N.parisii:72 Synechocystis.sp.:72

I3EP39              	100.00%		Q9FAB3              	100.00%
I3ELC4              	16.46%		
I3ES45              	8.75%		
I3EPI4              	8.33%		
Bootstrap support for I3EP39 as seed ortholog is 100%.
Bootstrap support for Q9FAB3 as seed ortholog is 100%.

Group of orthologs #92. Best score 72 bits
Score difference with first non-orthologous sequence - N.parisii:72 Synechocystis.sp.:72

I3ELM5              	100.00%		P73304              	100.00%
Bootstrap support for I3ELM5 as seed ortholog is 100%.
Bootstrap support for P73304 as seed ortholog is 100%.

Group of orthologs #93. Best score 71 bits
Score difference with first non-orthologous sequence - N.parisii:71 Synechocystis.sp.:71

I3ENT7              	100.00%		P73374              	100.00%
Bootstrap support for I3ENT7 as seed ortholog is 100%.
Bootstrap support for P73374 as seed ortholog is 100%.

Group of orthologs #94. Best score 70 bits
Score difference with first non-orthologous sequence - N.parisii:70 Synechocystis.sp.:70

I3EPR7              	100.00%		Q55653              	100.00%
Bootstrap support for I3EPR7 as seed ortholog is 100%.
Bootstrap support for Q55653 as seed ortholog is 100%.

Group of orthologs #95. Best score 69 bits
Score difference with first non-orthologous sequence - N.parisii:69 Synechocystis.sp.:69

I3EM86              	100.00%		P73295              	100.00%
Bootstrap support for I3EM86 as seed ortholog is 100%.
Bootstrap support for P73295 as seed ortholog is 100%.

Group of orthologs #96. Best score 69 bits
Score difference with first non-orthologous sequence - N.parisii:69 Synechocystis.sp.:69

I3ELA9              	100.00%		P77968              	100.00%
Bootstrap support for I3ELA9 as seed ortholog is 100%.
Bootstrap support for P77968 as seed ortholog is 100%.

Group of orthologs #97. Best score 69 bits
Score difference with first non-orthologous sequence - N.parisii:1 Synechocystis.sp.:69

I3EP52              	100.00%		P74598              	100.00%
Bootstrap support for I3EP52 as seed ortholog is 48%.
Alternative seed ortholog is I3EN12 (1 bits away from this cluster)
Bootstrap support for P74598 as seed ortholog is 100%.

Group of orthologs #98. Best score 67 bits
Score difference with first non-orthologous sequence - N.parisii:67 Synechocystis.sp.:67

I3EMT2              	100.00%		P73577              	100.00%
                    	       		Q55680              	15.84%
                    	       		P73121              	15.70%
                    	       		P73627              	15.70%
                    	       		Q55884              	13.29%
Bootstrap support for I3EMT2 as seed ortholog is 100%.
Bootstrap support for P73577 as seed ortholog is 100%.

Group of orthologs #99. Best score 66 bits
Score difference with first non-orthologous sequence - N.parisii:66 Synechocystis.sp.:66

I3EN10              	100.00%		Q55596              	100.00%
                    	       		P73574              	9.48%
                    	       		Q6ZEQ1              	5.87%
Bootstrap support for I3EN10 as seed ortholog is 100%.
Bootstrap support for Q55596 as seed ortholog is 100%.

Group of orthologs #100. Best score 66 bits
Score difference with first non-orthologous sequence - N.parisii:66 Synechocystis.sp.:66

I3ERT9              	100.00%		P73548              	100.00%
Bootstrap support for I3ERT9 as seed ortholog is 100%.
Bootstrap support for P73548 as seed ortholog is 100%.

Group of orthologs #101. Best score 66 bits
Score difference with first non-orthologous sequence - N.parisii:66 Synechocystis.sp.:66

I3EQI9              	100.00%		P74061              	100.00%
Bootstrap support for I3EQI9 as seed ortholog is 100%.
Bootstrap support for P74061 as seed ortholog is 100%.

Group of orthologs #102. Best score 65 bits
Score difference with first non-orthologous sequence - N.parisii:65 Synechocystis.sp.:65

I3EPV5              	100.00%		P73197              	100.00%
Bootstrap support for I3EPV5 as seed ortholog is 100%.
Bootstrap support for P73197 as seed ortholog is 100%.

Group of orthologs #103. Best score 64 bits
Score difference with first non-orthologous sequence - N.parisii:64 Synechocystis.sp.:1

I3ER24              	100.00%		P73369              	100.00%
Bootstrap support for I3ER24 as seed ortholog is 100%.
Bootstrap support for P73369 as seed ortholog is 51%.
Alternative seed ortholog is P72911 (1 bits away from this cluster)

Group of orthologs #104. Best score 64 bits
Score difference with first non-orthologous sequence - N.parisii:64 Synechocystis.sp.:64

I3EMV0              	100.00%		P80507              	100.00%
Bootstrap support for I3EMV0 as seed ortholog is 100%.
Bootstrap support for P80507 as seed ortholog is 100%.

Group of orthologs #105. Best score 63 bits
Score difference with first non-orthologous sequence - N.parisii:63 Synechocystis.sp.:63

I3EMR0              	100.00%		P73033              	100.00%
Bootstrap support for I3EMR0 as seed ortholog is 100%.
Bootstrap support for P73033 as seed ortholog is 100%.

Group of orthologs #106. Best score 62 bits
Score difference with first non-orthologous sequence - N.parisii:62 Synechocystis.sp.:62

I3EPI0              	100.00%		P73298              	100.00%
Bootstrap support for I3EPI0 as seed ortholog is 100%.
Bootstrap support for P73298 as seed ortholog is 100%.

Group of orthologs #107. Best score 59 bits
Score difference with first non-orthologous sequence - N.parisii:59 Synechocystis.sp.:2

I3ENC9              	100.00%		P74144              	100.00%
Bootstrap support for I3ENC9 as seed ortholog is 100%.
Bootstrap support for P74144 as seed ortholog is 47%.
Alternative seed ortholog is P72724 (2 bits away from this cluster)

Group of orthologs #108. Best score 59 bits
Score difference with first non-orthologous sequence - N.parisii:59 Synechocystis.sp.:59

I3ESW3              	100.00%		Q55766              	100.00%
Bootstrap support for I3ESW3 as seed ortholog is 100%.
Bootstrap support for Q55766 as seed ortholog is 100%.

Group of orthologs #109. Best score 58 bits
Score difference with first non-orthologous sequence - N.parisii:58 Synechocystis.sp.:58

I3ESK7              	100.00%		P74737              	100.00%
Bootstrap support for I3ESK7 as seed ortholog is 100%.
Bootstrap support for P74737 as seed ortholog is 100%.

Group of orthologs #110. Best score 57 bits
Score difference with first non-orthologous sequence - N.parisii:57 Synechocystis.sp.:57

I3ERD2              	100.00%		P73161              	100.00%
Bootstrap support for I3ERD2 as seed ortholog is 100%.
Bootstrap support for P73161 as seed ortholog is 100%.

Group of orthologs #111. Best score 57 bits
Score difference with first non-orthologous sequence - N.parisii:57 Synechocystis.sp.:57

I3ET48              	100.00%		P73809              	100.00%
Bootstrap support for I3ET48 as seed ortholog is 100%.
Bootstrap support for P73809 as seed ortholog is 100%.

Group of orthologs #112. Best score 56 bits
Score difference with first non-orthologous sequence - N.parisii:56 Synechocystis.sp.:56

I3EKY1              	100.00%		P72933              	100.00%
Bootstrap support for I3EKY1 as seed ortholog is 100%.
Bootstrap support for P72933 as seed ortholog is 100%.

Group of orthologs #113. Best score 56 bits
Score difference with first non-orthologous sequence - N.parisii:56 Synechocystis.sp.:56

I3ENI7              	100.00%		P74618              	100.00%
Bootstrap support for I3ENI7 as seed ortholog is 100%.
Bootstrap support for P74618 as seed ortholog is 100%.

Group of orthologs #114. Best score 55 bits
Score difference with first non-orthologous sequence - N.parisii:55 Synechocystis.sp.:55

I3ET52              	100.00%		P74250              	100.00%
                    	       		P73824              	34.01%
Bootstrap support for I3ET52 as seed ortholog is 100%.
Bootstrap support for P74250 as seed ortholog is 100%.

Group of orthologs #115. Best score 54 bits
Score difference with first non-orthologous sequence - N.parisii:54 Synechocystis.sp.:54

I3ENV8              	100.00%		P54735              	100.00%
I3EPK1              	27.86%		P74745              	22.66%
I3ER95              	13.51%		P73469              	12.96%
I3ES60              	12.27%		
I3ENM3              	11.64%		
I3ELV7              	10.81%		
I3EQB7              	8.32%		
I3EN33              	7.07%		
I3ELJ0              	5.41%		
Bootstrap support for I3ENV8 as seed ortholog is 100%.
Bootstrap support for P54735 as seed ortholog is 100%.

Group of orthologs #116. Best score 52 bits
Score difference with first non-orthologous sequence - N.parisii:52 Synechocystis.sp.:52

I3EQY4              	100.00%		Q57396              	100.00%
I3ESF7              	16.73%		
I3EQE4              	15.23%		
Bootstrap support for I3EQY4 as seed ortholog is 100%.
Bootstrap support for Q57396 as seed ortholog is 100%.

Group of orthologs #117. Best score 51 bits
Score difference with first non-orthologous sequence - N.parisii:51 Synechocystis.sp.:51

I3ELA5              	100.00%		Q55593              	100.00%
Bootstrap support for I3ELA5 as seed ortholog is 100%.
Bootstrap support for Q55593 as seed ortholog is 100%.

Group of orthologs #118. Best score 49 bits
Score difference with first non-orthologous sequence - N.parisii:49 Synechocystis.sp.:49

I3EPP3              	100.00%		P73481              	100.00%
Bootstrap support for I3EPP3 as seed ortholog is 100%.
Bootstrap support for P73481 as seed ortholog is 100%.

Group of orthologs #119. Best score 48 bits
Score difference with first non-orthologous sequence - N.parisii:48 Synechocystis.sp.:48

I3EPI5              	100.00%		Q55159              	100.00%
                    	       		P73670              	23.45%
                    	       		P73669              	13.52%
                    	       		P74305              	11.29%
                    	       		P74016              	8.06%
Bootstrap support for I3EPI5 as seed ortholog is 100%.
Bootstrap support for Q55159 as seed ortholog is 100%.

Group of orthologs #120. Best score 47 bits
Score difference with first non-orthologous sequence - N.parisii:47 Synechocystis.sp.:47

I3ERM1              	100.00%		P73308              	100.00%
Bootstrap support for I3ERM1 as seed ortholog is 100%.
Bootstrap support for P73308 as seed ortholog is 100%.

Group of orthologs #121. Best score 46 bits
Score difference with first non-orthologous sequence - N.parisii:46 Synechocystis.sp.:46

I3EMD3              	100.00%		P73091              	100.00%
Bootstrap support for I3EMD3 as seed ortholog is 100%.
Bootstrap support for P73091 as seed ortholog is 100%.

Group of orthologs #122. Best score 46 bits
Score difference with first non-orthologous sequence - N.parisii:46 Synechocystis.sp.:46

I3EMV5              	100.00%		P74230              	100.00%
Bootstrap support for I3EMV5 as seed ortholog is 100%.
Bootstrap support for P74230 as seed ortholog is 100%.

Group of orthologs #123. Best score 42 bits
Score difference with first non-orthologous sequence - N.parisii:42 Synechocystis.sp.:42

I3ERN5              	100.00%		P74432              	100.00%
Bootstrap support for I3ERN5 as seed ortholog is 100%.
Bootstrap support for P74432 as seed ortholog is 100%.