###################################
124 groups of orthologs
159 in-paralogs from N.ceranae
188 in-paralogs from Synechocystis.sp.
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 599 bits
Score difference with first non-orthologous sequence - N.ceranae:599 Synechocystis.sp.:599

C4V9R2              	100.00%		P74459              	100.00%
                    	       		P74361              	44.81%
                    	       		Q55662              	10.48%
Bootstrap support for C4V9R2 as seed ortholog is 100%.
Bootstrap support for P74459 as seed ortholog is 100%.

Group of orthologs #2. Best score 505 bits
Score difference with first non-orthologous sequence - N.ceranae:136 Synechocystis.sp.:505

C4VAJ8              	100.00%		P22358              	100.00%
                    	       		P73098              	36.13%
                    	       		Q55154              	23.63%
Bootstrap support for C4VAJ8 as seed ortholog is 99%.
Bootstrap support for P22358 as seed ortholog is 100%.

Group of orthologs #3. Best score 498 bits
Score difference with first non-orthologous sequence - N.ceranae:414 Synechocystis.sp.:412

C4V924              	100.00%		Q55522              	100.00%
Bootstrap support for C4V924 as seed ortholog is 100%.
Bootstrap support for Q55522 as seed ortholog is 100%.

Group of orthologs #4. Best score 443 bits
Score difference with first non-orthologous sequence - N.ceranae:113 Synechocystis.sp.:443

C4V9M4              	100.00%		Q55404              	100.00%
Bootstrap support for C4V9M4 as seed ortholog is 98%.
Bootstrap support for Q55404 as seed ortholog is 100%.

Group of orthologs #5. Best score 386 bits
Score difference with first non-orthologous sequence - N.ceranae:386 Synechocystis.sp.:324

C4V8R6              	100.00%		P73282              	100.00%
Bootstrap support for C4V8R6 as seed ortholog is 100%.
Bootstrap support for P73282 as seed ortholog is 100%.

Group of orthologs #6. Best score 385 bits
Score difference with first non-orthologous sequence - N.ceranae:385 Synechocystis.sp.:385

C4V9X9              	100.00%		P74208              	100.00%
Bootstrap support for C4V9X9 as seed ortholog is 100%.
Bootstrap support for P74208 as seed ortholog is 100%.

Group of orthologs #7. Best score 362 bits
Score difference with first non-orthologous sequence - N.ceranae:362 Synechocystis.sp.:245

C4V8R9              	100.00%		P73443              	100.00%
Bootstrap support for C4V8R9 as seed ortholog is 100%.
Bootstrap support for P73443 as seed ortholog is 100%.

Group of orthologs #8. Best score 353 bits
Score difference with first non-orthologous sequence - N.ceranae:353 Synechocystis.sp.:353

C4V8B6              	100.00%		P72720              	100.00%
Bootstrap support for C4V8B6 as seed ortholog is 100%.
Bootstrap support for P72720 as seed ortholog is 100%.

Group of orthologs #9. Best score 347 bits
Score difference with first non-orthologous sequence - N.ceranae:347 Synechocystis.sp.:347

C4V7A0              	100.00%		P72871              	100.00%
Bootstrap support for C4V7A0 as seed ortholog is 100%.
Bootstrap support for P72871 as seed ortholog is 100%.

Group of orthologs #10. Best score 327 bits
Score difference with first non-orthologous sequence - N.ceranae:327 Synechocystis.sp.:327

C4V9I0              	100.00%		P74507              	100.00%
Bootstrap support for C4V9I0 as seed ortholog is 100%.
Bootstrap support for P74507 as seed ortholog is 100%.

Group of orthologs #11. Best score 286 bits
Score difference with first non-orthologous sequence - N.ceranae:286 Synechocystis.sp.:220

C4V8Q1              	100.00%		P73505              	100.00%
Bootstrap support for C4V8Q1 as seed ortholog is 100%.
Bootstrap support for P73505 as seed ortholog is 99%.

Group of orthologs #12. Best score 286 bits
Score difference with first non-orthologous sequence - N.ceranae:286 Synechocystis.sp.:49

C4V7G9              	100.00%		Q6ZEV8              	100.00%
Bootstrap support for C4V7G9 as seed ortholog is 100%.
Bootstrap support for Q6ZEV8 as seed ortholog is 90%.

Group of orthologs #13. Best score 278 bits
Score difference with first non-orthologous sequence - N.ceranae:278 Synechocystis.sp.:278

C4VA61              	100.00%		P49433              	100.00%
                    	       		P80505              	9.50%
Bootstrap support for C4VA61 as seed ortholog is 100%.
Bootstrap support for P49433 as seed ortholog is 100%.

Group of orthologs #14. Best score 268 bits
Score difference with first non-orthologous sequence - N.ceranae:268 Synechocystis.sp.:268

C4V9K1              	100.00%		P74686              	100.00%
C4V9U6              	11.73%		
Bootstrap support for C4V9K1 as seed ortholog is 100%.
Bootstrap support for P74686 as seed ortholog is 100%.

Group of orthologs #15. Best score 265 bits
Score difference with first non-orthologous sequence - N.ceranae:265 Synechocystis.sp.:265

C4V998              	100.00%		P52208              	100.00%
Bootstrap support for C4V998 as seed ortholog is 100%.
Bootstrap support for P52208 as seed ortholog is 100%.

Group of orthologs #16. Best score 263 bits
Score difference with first non-orthologous sequence - N.ceranae:263 Synechocystis.sp.:263

C4V8X8              	100.00%		P77965              	100.00%
C4V6K7              	19.04%		
C4V829              	6.61%		
Bootstrap support for C4V8X8 as seed ortholog is 100%.
Bootstrap support for P77965 as seed ortholog is 100%.

Group of orthologs #17. Best score 260 bits
Score difference with first non-orthologous sequence - N.ceranae:260 Synechocystis.sp.:260

C4VA82              	100.00%		P73886              	100.00%
Bootstrap support for C4VA82 as seed ortholog is 100%.
Bootstrap support for P73886 as seed ortholog is 100%.

Group of orthologs #18. Best score 254 bits
Score difference with first non-orthologous sequence - N.ceranae:254 Synechocystis.sp.:254

C4VAW6              	100.00%		P73405              	100.00%
Bootstrap support for C4VAW6 as seed ortholog is 100%.
Bootstrap support for P73405 as seed ortholog is 100%.

Group of orthologs #19. Best score 245 bits
Score difference with first non-orthologous sequence - N.ceranae:245 Synechocystis.sp.:245

C4V9T0              	100.00%		P74240              	100.00%
C4V8X4              	52.16%		
Bootstrap support for C4V9T0 as seed ortholog is 100%.
Bootstrap support for P74240 as seed ortholog is 100%.

Group of orthologs #20. Best score 243 bits
Score difference with first non-orthologous sequence - N.ceranae:243 Synechocystis.sp.:243

C4V7D9              	100.00%		P74330              	100.00%
Bootstrap support for C4V7D9 as seed ortholog is 100%.
Bootstrap support for P74330 as seed ortholog is 100%.

Group of orthologs #21. Best score 231 bits
Score difference with first non-orthologous sequence - N.ceranae:231 Synechocystis.sp.:231

C4V839              	100.00%		P74257              	100.00%
Bootstrap support for C4V839 as seed ortholog is 100%.
Bootstrap support for P74257 as seed ortholog is 100%.

Group of orthologs #22. Best score 228 bits
Score difference with first non-orthologous sequence - N.ceranae:228 Synechocystis.sp.:228

C4VAP2              	100.00%		P77972              	100.00%
Bootstrap support for C4VAP2 as seed ortholog is 100%.
Bootstrap support for P77972 as seed ortholog is 100%.

Group of orthologs #23. Best score 222 bits
Score difference with first non-orthologous sequence - N.ceranae:20 Synechocystis.sp.:222

C4V8Q7              	100.00%		Q55804              	100.00%
Bootstrap support for C4V8Q7 as seed ortholog is 72%.
Alternative seed ortholog is C4V8Y9 (20 bits away from this cluster)
Bootstrap support for Q55804 as seed ortholog is 100%.

Group of orthologs #24. Best score 215 bits
Score difference with first non-orthologous sequence - N.ceranae:215 Synechocystis.sp.:215

C4VB75              	100.00%		P73758              	100.00%
                    	       		P74317              	11.37%
Bootstrap support for C4VB75 as seed ortholog is 100%.
Bootstrap support for P73758 as seed ortholog is 100%.

Group of orthologs #25. Best score 209 bits
Score difference with first non-orthologous sequence - N.ceranae:32 Synechocystis.sp.:209

C4VAA4              	100.00%		P73340              	100.00%
Bootstrap support for C4VAA4 as seed ortholog is 65%.
Alternative seed ortholog is C4V9E4 (32 bits away from this cluster)
Bootstrap support for P73340 as seed ortholog is 100%.

Group of orthologs #26. Best score 204 bits
Score difference with first non-orthologous sequence - N.ceranae:204 Synechocystis.sp.:204

C4V7F4              	100.00%		Q55863              	100.00%
                    	       		P73534              	23.91%
Bootstrap support for C4V7F4 as seed ortholog is 100%.
Bootstrap support for Q55863 as seed ortholog is 100%.

Group of orthologs #27. Best score 200 bits
Score difference with first non-orthologous sequence - N.ceranae:200 Synechocystis.sp.:55

C4V6P4              	100.00%		P74228              	100.00%
                    	       		P28371              	42.40%
                    	       		Q55421              	13.99%
Bootstrap support for C4V6P4 as seed ortholog is 100%.
Bootstrap support for P74228 as seed ortholog is 86%.

Group of orthologs #28. Best score 198 bits
Score difference with first non-orthologous sequence - N.ceranae:139 Synechocystis.sp.:198

C4V798              	100.00%		P73421              	100.00%
Bootstrap support for C4V798 as seed ortholog is 99%.
Bootstrap support for P73421 as seed ortholog is 100%.

Group of orthologs #29. Best score 198 bits
Score difference with first non-orthologous sequence - N.ceranae:198 Synechocystis.sp.:77

C4VAG0              	100.00%		P74214              	100.00%
Bootstrap support for C4VAG0 as seed ortholog is 100%.
Bootstrap support for P74214 as seed ortholog is 98%.

Group of orthologs #30. Best score 193 bits
Score difference with first non-orthologous sequence - N.ceranae:193 Synechocystis.sp.:123

C4V9C1              	100.00%		P74308              	100.00%
C4V9R8              	55.26%		
Bootstrap support for C4V9C1 as seed ortholog is 100%.
Bootstrap support for P74308 as seed ortholog is 99%.

Group of orthologs #31. Best score 191 bits
Score difference with first non-orthologous sequence - N.ceranae:191 Synechocystis.sp.:191

C4VAN5              	100.00%		P72872              	100.00%
Bootstrap support for C4VAN5 as seed ortholog is 100%.
Bootstrap support for P72872 as seed ortholog is 100%.

Group of orthologs #32. Best score 191 bits
Score difference with first non-orthologous sequence - N.ceranae:191 Synechocystis.sp.:191

C4V6U9              	100.00%		Q55983              	100.00%
Bootstrap support for C4V6U9 as seed ortholog is 100%.
Bootstrap support for Q55983 as seed ortholog is 100%.

Group of orthologs #33. Best score 188 bits
Score difference with first non-orthologous sequence - N.ceranae:188 Synechocystis.sp.:188

C4V7S0              	100.00%		P73201              	100.00%
Bootstrap support for C4V7S0 as seed ortholog is 100%.
Bootstrap support for P73201 as seed ortholog is 100%.

Group of orthologs #34. Best score 188 bits
Score difference with first non-orthologous sequence - N.ceranae:188 Synechocystis.sp.:188

C4V9U1              	100.00%		P73825              	100.00%
Bootstrap support for C4V9U1 as seed ortholog is 100%.
Bootstrap support for P73825 as seed ortholog is 100%.

Group of orthologs #35. Best score 185 bits
Score difference with first non-orthologous sequence - N.ceranae:185 Synechocystis.sp.:185

C4V761              	100.00%		P74258              	100.00%
Bootstrap support for C4V761 as seed ortholog is 100%.
Bootstrap support for P74258 as seed ortholog is 100%.

Group of orthologs #36. Best score 183 bits
Score difference with first non-orthologous sequence - N.ceranae:183 Synechocystis.sp.:183

C4VAU6              	100.00%		P74421              	100.00%
Bootstrap support for C4VAU6 as seed ortholog is 100%.
Bootstrap support for P74421 as seed ortholog is 100%.

Group of orthologs #37. Best score 178 bits
Score difference with first non-orthologous sequence - N.ceranae:178 Synechocystis.sp.:178

C4V9G7              	100.00%		P74344              	100.00%
Bootstrap support for C4V9G7 as seed ortholog is 100%.
Bootstrap support for P74344 as seed ortholog is 100%.

Group of orthologs #38. Best score 177 bits
Score difference with first non-orthologous sequence - N.ceranae:32 Synechocystis.sp.:177

C4VAQ4              	100.00%		P73769              	100.00%
Bootstrap support for C4VAQ4 as seed ortholog is 82%.
Bootstrap support for P73769 as seed ortholog is 100%.

Group of orthologs #39. Best score 171 bits
Score difference with first non-orthologous sequence - N.ceranae:171 Synechocystis.sp.:171

C4V9F5              	100.00%		P74702              	100.00%
Bootstrap support for C4V9F5 as seed ortholog is 100%.
Bootstrap support for P74702 as seed ortholog is 100%.

Group of orthologs #40. Best score 170 bits
Score difference with first non-orthologous sequence - N.ceranae:170 Synechocystis.sp.:109

C4V869              	100.00%		P74176              	100.00%
C4V868              	100.00%		P73239              	100.00%
C4V863              	27.59%		P73533              	16.94%
C4V825              	11.93%		P73278              	14.91%
C4V6U1              	10.68%		P73400              	14.91%
                    	       		Q55856              	12.68%
Bootstrap support for C4V869 as seed ortholog is 100%.
Bootstrap support for C4V868 as seed ortholog is 100%.
Bootstrap support for P74176 as seed ortholog is 99%.
Bootstrap support for P73239 as seed ortholog is 99%.

Group of orthologs #41. Best score 170 bits
Score difference with first non-orthologous sequence - N.ceranae:170 Synechocystis.sp.:75

C4V847              	100.00%		P52276              	100.00%
Bootstrap support for C4V847 as seed ortholog is 100%.
Bootstrap support for P52276 as seed ortholog is 96%.

Group of orthologs #42. Best score 163 bits
Score difference with first non-orthologous sequence - N.ceranae:163 Synechocystis.sp.:163

C4V8J1              	100.00%		P74490              	100.00%
Bootstrap support for C4V8J1 as seed ortholog is 100%.
Bootstrap support for P74490 as seed ortholog is 100%.

Group of orthologs #43. Best score 159 bits
Score difference with first non-orthologous sequence - N.ceranae:71 Synechocystis.sp.:159

C4V943              	100.00%		Q55729              	100.00%
Bootstrap support for C4V943 as seed ortholog is 96%.
Bootstrap support for Q55729 as seed ortholog is 100%.

Group of orthologs #44. Best score 153 bits
Score difference with first non-orthologous sequence - N.ceranae:153 Synechocystis.sp.:153

C4V6H9              	100.00%		P77966              	100.00%
Bootstrap support for C4V6H9 as seed ortholog is 100%.
Bootstrap support for P77966 as seed ortholog is 100%.

Group of orthologs #45. Best score 152 bits
Score difference with first non-orthologous sequence - N.ceranae:152 Synechocystis.sp.:152

C4VAL9              	100.00%		Q55486              	100.00%
Bootstrap support for C4VAL9 as seed ortholog is 100%.
Bootstrap support for Q55486 as seed ortholog is 100%.

Group of orthologs #46. Best score 151 bits
Score difference with first non-orthologous sequence - N.ceranae:151 Synechocystis.sp.:151

C4V8Z7              	100.00%		P37367              	100.00%
Bootstrap support for C4V8Z7 as seed ortholog is 100%.
Bootstrap support for P37367 as seed ortholog is 100%.

Group of orthologs #47. Best score 149 bits
Score difference with first non-orthologous sequence - N.ceranae:149 Synechocystis.sp.:149

C4V8H3              	100.00%		P74770              	100.00%
Bootstrap support for C4V8H3 as seed ortholog is 100%.
Bootstrap support for P74770 as seed ortholog is 100%.

Group of orthologs #48. Best score 147 bits
Score difference with first non-orthologous sequence - N.ceranae:147 Synechocystis.sp.:147

C4V7G1              	100.00%		P72689              	100.00%
Bootstrap support for C4V7G1 as seed ortholog is 100%.
Bootstrap support for P72689 as seed ortholog is 100%.

Group of orthologs #49. Best score 145 bits
Score difference with first non-orthologous sequence - N.ceranae:145 Synechocystis.sp.:145

C4V9Q2              	100.00%		P74494              	100.00%
Bootstrap support for C4V9Q2 as seed ortholog is 100%.
Bootstrap support for P74494 as seed ortholog is 100%.

Group of orthologs #50. Best score 141 bits
Score difference with first non-orthologous sequence - N.ceranae:141 Synechocystis.sp.:141

C4V716              	100.00%		P74181              	100.00%
Bootstrap support for C4V716 as seed ortholog is 100%.
Bootstrap support for P74181 as seed ortholog is 100%.

Group of orthologs #51. Best score 133 bits
Score difference with first non-orthologous sequence - N.ceranae:133 Synechocystis.sp.:133

C4V838              	100.00%		P77968              	100.00%
Bootstrap support for C4V838 as seed ortholog is 100%.
Bootstrap support for P77968 as seed ortholog is 100%.

Group of orthologs #52. Best score 131 bits
Score difference with first non-orthologous sequence - N.ceranae:131 Synechocystis.sp.:49

C4V706              	100.00%		Q55624              	100.00%
Bootstrap support for C4V706 as seed ortholog is 100%.
Bootstrap support for Q55624 as seed ortholog is 98%.

Group of orthologs #53. Best score 125 bits
Score difference with first non-orthologous sequence - N.ceranae:27 Synechocystis.sp.:8

C4VBA6              	100.00%		P26527              	100.00%
Bootstrap support for C4VBA6 as seed ortholog is 50%.
Alternative seed ortholog is C4V9P1 (27 bits away from this cluster)
Bootstrap support for P26527 as seed ortholog is 51%.
Alternative seed ortholog is P27179 (8 bits away from this cluster)

Group of orthologs #54. Best score 124 bits
Score difference with first non-orthologous sequence - N.ceranae:124 Synechocystis.sp.:124

C4V9V6              	100.00%		P74062              	100.00%
                    	       		Q59999              	50.63%
Bootstrap support for C4V9V6 as seed ortholog is 100%.
Bootstrap support for P74062 as seed ortholog is 100%.

Group of orthologs #55. Best score 121 bits
Score difference with first non-orthologous sequence - N.ceranae:121 Synechocystis.sp.:121

C4V9Q8              	100.00%		P73004              	100.00%
Bootstrap support for C4V9Q8 as seed ortholog is 100%.
Bootstrap support for P73004 as seed ortholog is 100%.

Group of orthologs #56. Best score 121 bits
Score difference with first non-orthologous sequence - N.ceranae:121 Synechocystis.sp.:77

C4V9L3              	100.00%		P73789              	100.00%
Bootstrap support for C4V9L3 as seed ortholog is 100%.
Bootstrap support for P73789 as seed ortholog is 99%.

Group of orthologs #57. Best score 119 bits
Score difference with first non-orthologous sequence - N.ceranae:119 Synechocystis.sp.:119

C4V7E8              	100.00%		P74552              	100.00%
Bootstrap support for C4V7E8 as seed ortholog is 100%.
Bootstrap support for P74552 as seed ortholog is 100%.

Group of orthologs #58. Best score 119 bits
Score difference with first non-orthologous sequence - N.ceranae:119 Synechocystis.sp.:3

C4V855              	100.00%		P74285              	100.00%
Bootstrap support for C4V855 as seed ortholog is 100%.
Bootstrap support for P74285 as seed ortholog is 51%.
Alternative seed ortholog is Q55689 (3 bits away from this cluster)

Group of orthologs #59. Best score 119 bits
Score difference with first non-orthologous sequence - N.ceranae:119 Synechocystis.sp.:119

C4V6K5              	100.00%		Q55187              	100.00%
Bootstrap support for C4V6K5 as seed ortholog is 100%.
Bootstrap support for Q55187 as seed ortholog is 100%.

Group of orthologs #60. Best score 119 bits
Score difference with first non-orthologous sequence - N.ceranae:26 Synechocystis.sp.:119

C4VAU0              	100.00%		P74227              	100.00%
Bootstrap support for C4VAU0 as seed ortholog is 70%.
Alternative seed ortholog is C4V8U1 (26 bits away from this cluster)
Bootstrap support for P74227 as seed ortholog is 100%.

Group of orthologs #61. Best score 119 bits
Score difference with first non-orthologous sequence - N.ceranae:119 Synechocystis.sp.:69

C4V8M8              	100.00%		Q55505              	100.00%
Bootstrap support for C4V8M8 as seed ortholog is 100%.
Bootstrap support for Q55505 as seed ortholog is 92%.

Group of orthologs #62. Best score 118 bits
Score difference with first non-orthologous sequence - N.ceranae:118 Synechocystis.sp.:118

C4V835              	100.00%		Q55956              	100.00%
Bootstrap support for C4V835 as seed ortholog is 100%.
Bootstrap support for Q55956 as seed ortholog is 100%.

Group of orthologs #63. Best score 108 bits
Score difference with first non-orthologous sequence - N.ceranae:108 Synechocystis.sp.:66

C4V7X7              	100.00%		P53383              	100.00%
Bootstrap support for C4V7X7 as seed ortholog is 100%.
Bootstrap support for P53383 as seed ortholog is 98%.

Group of orthologs #64. Best score 108 bits
Score difference with first non-orthologous sequence - N.ceranae:108 Synechocystis.sp.:108

C4V8S9              	100.00%		P52983              	100.00%
Bootstrap support for C4V8S9 as seed ortholog is 100%.
Bootstrap support for P52983 as seed ortholog is 100%.

Group of orthologs #65. Best score 108 bits
Score difference with first non-orthologous sequence - N.ceranae:4 Synechocystis.sp.:108

C4V6P1              	100.00%		P73349              	100.00%
Bootstrap support for C4V6P1 as seed ortholog is 69%.
Alternative seed ortholog is C4V867 (4 bits away from this cluster)
Bootstrap support for P73349 as seed ortholog is 100%.

Group of orthologs #66. Best score 108 bits
Score difference with first non-orthologous sequence - N.ceranae:108 Synechocystis.sp.:108

C4V6J8              	100.00%		Q59994              	100.00%
Bootstrap support for C4V6J8 as seed ortholog is 100%.
Bootstrap support for Q59994 as seed ortholog is 100%.

Group of orthologs #67. Best score 106 bits
Score difference with first non-orthologous sequence - N.ceranae:106 Synechocystis.sp.:106

C4V8V8              	100.00%		P22034              	100.00%
C4V788              	11.72%		Q05972              	59.72%
C4V6N8              	8.17%		
C4V7N1              	8.06%		
C4V9B4              	7.42%		
Bootstrap support for C4V8V8 as seed ortholog is 100%.
Bootstrap support for P22034 as seed ortholog is 100%.

Group of orthologs #68. Best score 106 bits
Score difference with first non-orthologous sequence - N.ceranae:106 Synechocystis.sp.:106

C4V8S2              	100.00%		P72666              	100.00%
Bootstrap support for C4V8S2 as seed ortholog is 100%.
Bootstrap support for P72666 as seed ortholog is 100%.

Group of orthologs #69. Best score 102 bits
Score difference with first non-orthologous sequence - N.ceranae:102 Synechocystis.sp.:102

C4V8A0              	100.00%		Q55174              	100.00%
C4V7P0              	35.22%		
C4V6I5              	31.95%		
C4VBE2              	30.31%		
C4V6X9              	29.42%		
C4V6N1              	28.68%		
C4VA58              	5.35%		
Bootstrap support for C4V8A0 as seed ortholog is 100%.
Bootstrap support for Q55174 as seed ortholog is 100%.

Group of orthologs #70. Best score 102 bits
Score difference with first non-orthologous sequence - N.ceranae:102 Synechocystis.sp.:102

C4V7R7              	100.00%		P73015              	100.00%
Bootstrap support for C4V7R7 as seed ortholog is 100%.
Bootstrap support for P73015 as seed ortholog is 100%.

Group of orthologs #71. Best score 101 bits
Score difference with first non-orthologous sequence - N.ceranae:101 Synechocystis.sp.:101

C4V729              	100.00%		P73197              	100.00%
Bootstrap support for C4V729 as seed ortholog is 100%.
Bootstrap support for P73197 as seed ortholog is 100%.

Group of orthologs #72. Best score 101 bits
Score difference with first non-orthologous sequence - N.ceranae:101 Synechocystis.sp.:101

C4VA23              	100.00%		Q55724              	100.00%
Bootstrap support for C4VA23 as seed ortholog is 100%.
Bootstrap support for Q55724 as seed ortholog is 100%.

Group of orthologs #73. Best score 99 bits
Score difference with first non-orthologous sequence - N.ceranae:99 Synechocystis.sp.:99

C4V8X0              	100.00%		P74034              	100.00%
Bootstrap support for C4V8X0 as seed ortholog is 100%.
Bootstrap support for P74034 as seed ortholog is 100%.

Group of orthologs #74. Best score 98 bits
Score difference with first non-orthologous sequence - N.ceranae:98 Synechocystis.sp.:98

C4V8D9              	100.00%		P73942              	100.00%
Bootstrap support for C4V8D9 as seed ortholog is 100%.
Bootstrap support for P73942 as seed ortholog is 100%.

Group of orthologs #75. Best score 95 bits
Score difference with first non-orthologous sequence - N.ceranae:95 Synechocystis.sp.:95

C4VBC7              	100.00%		Q55766              	100.00%
Bootstrap support for C4VBC7 as seed ortholog is 100%.
Bootstrap support for Q55766 as seed ortholog is 100%.

Group of orthologs #76. Best score 94 bits
Score difference with first non-orthologous sequence - N.ceranae:94 Synechocystis.sp.:94

C4V6L7              	100.00%		P73411              	100.00%
Bootstrap support for C4V6L7 as seed ortholog is 100%.
Bootstrap support for P73411 as seed ortholog is 100%.

Group of orthologs #77. Best score 92 bits
Score difference with first non-orthologous sequence - N.ceranae:92 Synechocystis.sp.:92

C4V8P3              	100.00%		Q55589              	100.00%
C4V939              	16.03%		
Bootstrap support for C4V8P3 as seed ortholog is 100%.
Bootstrap support for Q55589 as seed ortholog is 100%.

Group of orthologs #78. Best score 92 bits
Score difference with first non-orthologous sequence - N.ceranae:92 Synechocystis.sp.:92

C4V6Q3              	100.00%		P73220              	100.00%
Bootstrap support for C4V6Q3 as seed ortholog is 100%.
Bootstrap support for P73220 as seed ortholog is 100%.

Group of orthologs #79. Best score 92 bits
Score difference with first non-orthologous sequence - N.ceranae:92 Synechocystis.sp.:92

C4VAS3              	100.00%		P73335              	100.00%
Bootstrap support for C4VAS3 as seed ortholog is 100%.
Bootstrap support for P73335 as seed ortholog is 100%.

Group of orthologs #80. Best score 90 bits
Score difference with first non-orthologous sequence - N.ceranae:90 Synechocystis.sp.:90

C4VAJ2              	100.00%		P74732              	100.00%
Bootstrap support for C4VAJ2 as seed ortholog is 100%.
Bootstrap support for P74732 as seed ortholog is 100%.

Group of orthologs #81. Best score 89 bits
Score difference with first non-orthologous sequence - N.ceranae:89 Synechocystis.sp.:89

C4V9U3              	100.00%		Q55470              	100.00%
C4VAC4              	24.95%		
Bootstrap support for C4V9U3 as seed ortholog is 100%.
Bootstrap support for Q55470 as seed ortholog is 100%.

Group of orthologs #82. Best score 89 bits
Score difference with first non-orthologous sequence - N.ceranae:89 Synechocystis.sp.:89

C4V988              	100.00%		P72648              	100.00%
Bootstrap support for C4V988 as seed ortholog is 100%.
Bootstrap support for P72648 as seed ortholog is 100%.

Group of orthologs #83. Best score 88 bits
Score difference with first non-orthologous sequence - N.ceranae:88 Synechocystis.sp.:88

C4V7A9              	100.00%		P74061              	100.00%
Bootstrap support for C4V7A9 as seed ortholog is 100%.
Bootstrap support for P74061 as seed ortholog is 100%.

Group of orthologs #84. Best score 86 bits
Score difference with first non-orthologous sequence - N.ceranae:86 Synechocystis.sp.:86

C4V9L9              	100.00%		Q59998              	100.00%
                    	       		Q59997              	20.28%
                    	       		P74512              	15.88%
                    	       		P73241              	14.34%
                    	       		P73867              	7.25%
Bootstrap support for C4V9L9 as seed ortholog is 100%.
Bootstrap support for Q59998 as seed ortholog is 100%.

Group of orthologs #85. Best score 86 bits
Score difference with first non-orthologous sequence - N.ceranae:86 Synechocystis.sp.:86

C4V9A9              	100.00%		P74250              	100.00%
C4V9B0              	7.73%		P73824              	26.24%
Bootstrap support for C4V9A9 as seed ortholog is 100%.
Bootstrap support for P74250 as seed ortholog is 100%.

Group of orthologs #86. Best score 82 bits
Score difference with first non-orthologous sequence - N.ceranae:82 Synechocystis.sp.:82

C4VB94              	100.00%		P73302              	100.00%
                    	       		P72641              	19.03%
Bootstrap support for C4VB94 as seed ortholog is 100%.
Bootstrap support for P73302 as seed ortholog is 100%.

Group of orthologs #87. Best score 82 bits
Score difference with first non-orthologous sequence - N.ceranae:82 Synechocystis.sp.:82

C4V9T6              	100.00%		Q9FAB3              	100.00%
C4V753              	7.94%		
Bootstrap support for C4V9T6 as seed ortholog is 100%.
Bootstrap support for Q9FAB3 as seed ortholog is 100%.

Group of orthologs #88. Best score 82 bits
Score difference with first non-orthologous sequence - N.ceranae:82 Synechocystis.sp.:82

C4VAL6              	100.00%		P73810              	100.00%
Bootstrap support for C4VAL6 as seed ortholog is 100%.
Bootstrap support for P73810 as seed ortholog is 100%.

Group of orthologs #89. Best score 81 bits
Score difference with first non-orthologous sequence - N.ceranae:81 Synechocystis.sp.:81

C4V7F2              	100.00%		P72702              	100.00%
C4V7M2              	41.50%		
Bootstrap support for C4V7F2 as seed ortholog is 100%.
Bootstrap support for P72702 as seed ortholog is 100%.

Group of orthologs #90. Best score 81 bits
Score difference with first non-orthologous sequence - N.ceranae:81 Synechocystis.sp.:19

C4VBR5              	100.00%		P74336              	100.00%
Bootstrap support for C4VBR5 as seed ortholog is 100%.
Bootstrap support for P74336 as seed ortholog is 70%.
Alternative seed ortholog is P72930 (19 bits away from this cluster)

Group of orthologs #91. Best score 79 bits
Score difference with first non-orthologous sequence - N.ceranae:79 Synechocystis.sp.:79

C4VA15              	100.00%		P73304              	100.00%
Bootstrap support for C4VA15 as seed ortholog is 100%.
Bootstrap support for P73304 as seed ortholog is 100%.

Group of orthologs #92. Best score 77 bits
Score difference with first non-orthologous sequence - N.ceranae:77 Synechocystis.sp.:77

C4V9J0              	100.00%		P74592              	100.00%
Bootstrap support for C4V9J0 as seed ortholog is 100%.
Bootstrap support for P74592 as seed ortholog is 100%.

Group of orthologs #93. Best score 76 bits
Score difference with first non-orthologous sequence - N.ceranae:76 Synechocystis.sp.:76

C4V9I7              	100.00%		Q6YRX0              	100.00%
                    	       		Q6ZEM3              	100.00%
Bootstrap support for C4V9I7 as seed ortholog is 100%.
Bootstrap support for Q6YRX0 as seed ortholog is 100%.
Bootstrap support for Q6ZEM3 as seed ortholog is 100%.

Group of orthologs #94. Best score 76 bits
Score difference with first non-orthologous sequence - N.ceranae:76 Synechocystis.sp.:76

C4V755              	100.00%		P73648              	100.00%
Bootstrap support for C4V755 as seed ortholog is 100%.
Bootstrap support for P73648 as seed ortholog is 100%.

Group of orthologs #95. Best score 75 bits
Score difference with first non-orthologous sequence - N.ceranae:75 Synechocystis.sp.:75

C4V7P7              	100.00%		Q55482              	100.00%
Bootstrap support for C4V7P7 as seed ortholog is 100%.
Bootstrap support for Q55482 as seed ortholog is 100%.

Group of orthologs #96. Best score 73 bits
Score difference with first non-orthologous sequence - N.ceranae:73 Synechocystis.sp.:73

C4VAA8              	100.00%		P73056              	100.00%
Bootstrap support for C4VAA8 as seed ortholog is 100%.
Bootstrap support for P73056 as seed ortholog is 100%.

Group of orthologs #97. Best score 73 bits
Score difference with first non-orthologous sequence - N.ceranae:73 Synechocystis.sp.:13

C4V8D4              	100.00%		P74598              	100.00%
Bootstrap support for C4V8D4 as seed ortholog is 100%.
Bootstrap support for P74598 as seed ortholog is 62%.
Alternative seed ortholog is P73594 (13 bits away from this cluster)

Group of orthologs #98. Best score 70 bits
Score difference with first non-orthologous sequence - N.ceranae:70 Synechocystis.sp.:70

C4VAD6              	100.00%		P15729              	100.00%
C4V7A1              	14.89%		
Bootstrap support for C4VAD6 as seed ortholog is 100%.
Bootstrap support for P15729 as seed ortholog is 100%.

Group of orthologs #99. Best score 67 bits
Score difference with first non-orthologous sequence - N.ceranae:67 Synechocystis.sp.:67

C4V6Q9              	100.00%		P73295              	100.00%
Bootstrap support for C4V6Q9 as seed ortholog is 100%.
Bootstrap support for P73295 as seed ortholog is 100%.

Group of orthologs #100. Best score 65 bits
Score difference with first non-orthologous sequence - N.ceranae:65 Synechocystis.sp.:65

C4VAB3              	100.00%		P73474              	100.00%
                    	       		Q55814              	14.00%
                    	       		Q55415              	12.33%
Bootstrap support for C4VAB3 as seed ortholog is 100%.
Bootstrap support for P73474 as seed ortholog is 100%.

Group of orthologs #101. Best score 65 bits
Score difference with first non-orthologous sequence - N.ceranae:65 Synechocystis.sp.:65

C4V9M3              	100.00%		P74432              	100.00%
Bootstrap support for C4V9M3 as seed ortholog is 100%.
Bootstrap support for P74432 as seed ortholog is 100%.

Group of orthologs #102. Best score 64 bits
Score difference with first non-orthologous sequence - N.ceranae:64 Synechocystis.sp.:64

C4V7Q4              	100.00%		P74737              	100.00%
C4V7I3              	47.26%		
Bootstrap support for C4V7Q4 as seed ortholog is 100%.
Bootstrap support for P74737 as seed ortholog is 100%.

Group of orthologs #103. Best score 64 bits
Score difference with first non-orthologous sequence - N.ceranae:64 Synechocystis.sp.:64

C4V8H4              	100.00%		P74492              	100.00%
Bootstrap support for C4V8H4 as seed ortholog is 100%.
Bootstrap support for P74492 as seed ortholog is 100%.

Group of orthologs #104. Best score 62 bits
Score difference with first non-orthologous sequence - N.ceranae:62 Synechocystis.sp.:20

C4V989              	100.00%		P74548              	100.00%
                    	       		Q79EE4              	22.96%
                    	       		P74127              	22.64%
                    	       		P73468              	19.34%
                    	       		P73265              	15.57%
                    	       		P73898              	15.09%
                    	       		P72734              	13.68%
                    	       		P73721              	13.68%
                    	       		Q55463              	13.52%
                    	       		P72710              	11.95%
                    	       		Q55821              	11.79%
                    	       		P73030              	11.16%
                    	       		Q55490              	9.91%
                    	       		Q55619              	9.28%
                    	       		P73650              	8.18%
                    	       		P73725              	7.86%
                    	       		Q55740              	7.23%
                    	       		Q55753              	7.08%
                    	       		P73086              	6.92%
                    	       		Q55195              	6.92%
                    	       		P72626              	6.92%
                    	       		Q55649              	6.76%
                    	       		P72592              	6.29%
                    	       		P73788              	6.29%
                    	       		Q55196              	6.29%
                    	       		Q55281              	5.97%
                    	       		Q55816              	5.97%
                    	       		P74140              	5.35%
                    	       		Q55164              	5.35%
Bootstrap support for C4V989 as seed ortholog is 100%.
Bootstrap support for P74548 as seed ortholog is 74%.
Alternative seed ortholog is P72884 (20 bits away from this cluster)

Group of orthologs #105. Best score 62 bits
Score difference with first non-orthologous sequence - N.ceranae:62 Synechocystis.sp.:62

C4V6P8              	100.00%		P73161              	100.00%
Bootstrap support for C4V6P8 as seed ortholog is 100%.
Bootstrap support for P73161 as seed ortholog is 100%.

Group of orthologs #106. Best score 62 bits
Score difference with first non-orthologous sequence - N.ceranae:62 Synechocystis.sp.:10

C4VB10              	100.00%		P72933              	100.00%
Bootstrap support for C4VB10 as seed ortholog is 100%.
Bootstrap support for P72933 as seed ortholog is 62%.
Alternative seed ortholog is P73799 (10 bits away from this cluster)

Group of orthologs #107. Best score 61 bits
Score difference with first non-orthologous sequence - N.ceranae:61 Synechocystis.sp.:61

C4V7Y9              	100.00%		P54735              	100.00%
C4V9G5              	26.19%		P74745              	22.06%
C4V889              	24.54%		P73469              	12.29%
C4V6L2              	20.51%		
C4VAQ9              	18.68%		
C4V8D6              	14.65%		
C4V8C2              	10.26%		
C4V6N2              	6.96%		
C4V8N0              	5.49%		
Bootstrap support for C4V7Y9 as seed ortholog is 100%.
Bootstrap support for P54735 as seed ortholog is 100%.

Group of orthologs #108. Best score 61 bits
Score difference with first non-orthologous sequence - N.ceranae:61 Synechocystis.sp.:61

C4V8R0              	100.00%		P73310              	100.00%
Bootstrap support for C4V8R0 as seed ortholog is 100%.
Bootstrap support for P73310 as seed ortholog is 100%.

Group of orthologs #109. Best score 60 bits
Score difference with first non-orthologous sequence - N.ceranae:60 Synechocystis.sp.:60

C4V7Q0              	100.00%		Q55968              	100.00%
                    	       		Q55481              	44.23%
Bootstrap support for C4V7Q0 as seed ortholog is 100%.
Bootstrap support for Q55968 as seed ortholog is 100%.

Group of orthologs #110. Best score 59 bits
Score difference with first non-orthologous sequence - N.ceranae:59 Synechocystis.sp.:59

C4V7C3              	100.00%		P53579              	100.00%
                    	       		P53580              	60.22%
                    	       		P53581              	31.65%
Bootstrap support for C4V7C3 as seed ortholog is 100%.
Bootstrap support for P53579 as seed ortholog is 100%.

Group of orthologs #111. Best score 59 bits
Score difference with first non-orthologous sequence - N.ceranae:59 Synechocystis.sp.:59

C4V7U4              	100.00%		P74430              	100.00%
                    	       		P73955              	11.43%
Bootstrap support for C4V7U4 as seed ortholog is 100%.
Bootstrap support for P74430 as seed ortholog is 100%.

Group of orthologs #112. Best score 58 bits
Score difference with first non-orthologous sequence - N.ceranae:58 Synechocystis.sp.:58

C4V6W1              	100.00%		P73141              	100.00%
Bootstrap support for C4V6W1 as seed ortholog is 100%.
Bootstrap support for P73141 as seed ortholog is 100%.

Group of orthologs #113. Best score 58 bits
Score difference with first non-orthologous sequence - N.ceranae:58 Synechocystis.sp.:58

C4V7H7              	100.00%		P74229              	100.00%
Bootstrap support for C4V7H7 as seed ortholog is 100%.
Bootstrap support for P74229 as seed ortholog is 100%.

Group of orthologs #114. Best score 58 bits
Score difference with first non-orthologous sequence - N.ceranae:58 Synechocystis.sp.:3

C4VA89              	100.00%		Q55667              	100.00%
Bootstrap support for C4VA89 as seed ortholog is 100%.
Bootstrap support for Q55667 as seed ortholog is 55%.
Alternative seed ortholog is P72724 (3 bits away from this cluster)

Group of orthologs #115. Best score 57 bits
Score difference with first non-orthologous sequence - N.ceranae:16 Synechocystis.sp.:57

C4VAT5              	100.00%		Q55596              	100.00%
                    	       		P73574              	11.28%
                    	       		Q6ZEQ1              	7.74%
                    	       		Q55922              	5.53%
Bootstrap support for C4VAT5 as seed ortholog is 71%.
Alternative seed ortholog is C4V7D3 (16 bits away from this cluster)
Bootstrap support for Q55596 as seed ortholog is 100%.

Group of orthologs #116. Best score 57 bits
Score difference with first non-orthologous sequence - N.ceranae:57 Synechocystis.sp.:57

C4VBN2              	100.00%		P73809              	100.00%
Bootstrap support for C4VBN2 as seed ortholog is 100%.
Bootstrap support for P73809 as seed ortholog is 100%.

Group of orthologs #117. Best score 53 bits
Score difference with first non-orthologous sequence - N.ceranae:53 Synechocystis.sp.:53

C4V8P0              	100.00%		Q6YRT4              	100.00%
                    	       		Q6ZEP6              	91.59%
Bootstrap support for C4V8P0 as seed ortholog is 100%.
Bootstrap support for Q6YRT4 as seed ortholog is 100%.

Group of orthologs #118. Best score 52 bits
Score difference with first non-orthologous sequence - N.ceranae:52 Synechocystis.sp.:52

C4V886              	100.00%		P73316              	100.00%
Bootstrap support for C4V886 as seed ortholog is 100%.
Bootstrap support for P73316 as seed ortholog is 100%.

Group of orthologs #119. Best score 50 bits
Score difference with first non-orthologous sequence - N.ceranae:50 Synechocystis.sp.:50

C4VB01              	100.00%		P72580              	100.00%
C4V8K1              	25.81%		P72683              	10.12%
Bootstrap support for C4VB01 as seed ortholog is 100%.
Bootstrap support for P72580 as seed ortholog is 100%.

Group of orthologs #120. Best score 50 bits
Score difference with first non-orthologous sequence - N.ceranae:50 Synechocystis.sp.:50

C4V6P7              	100.00%		P74068              	100.00%
Bootstrap support for C4V6P7 as seed ortholog is 100%.
Bootstrap support for P74068 as seed ortholog is 100%.

Group of orthologs #121. Best score 47 bits
Score difference with first non-orthologous sequence - N.ceranae:47 Synechocystis.sp.:47

C4VBD8              	100.00%		P72657              	100.00%
Bootstrap support for C4VBD8 as seed ortholog is 100%.
Bootstrap support for P72657 as seed ortholog is 100%.

Group of orthologs #122. Best score 47 bits
Score difference with first non-orthologous sequence - N.ceranae:47 Synechocystis.sp.:47

C4V7Z9              	100.00%		P80507              	100.00%
Bootstrap support for C4V7Z9 as seed ortholog is 100%.
Bootstrap support for P80507 as seed ortholog is 100%.

Group of orthologs #123. Best score 44 bits
Score difference with first non-orthologous sequence - N.ceranae:44 Synechocystis.sp.:44

C4V9L5              	100.00%		P72601              	100.00%
Bootstrap support for C4V9L5 as seed ortholog is 100%.
Bootstrap support for P72601 as seed ortholog is 100%.

Group of orthologs #124. Best score 44 bits
Score difference with first non-orthologous sequence - N.ceranae:44 Synechocystis.sp.:44

C4V7Z3              	100.00%		P74230              	100.00%
Bootstrap support for C4V7Z3 as seed ortholog is 100%.
Bootstrap support for P74230 as seed ortholog is 100%.