###################################
358 groups of orthologs
404 in-paralogs from M.jannaschii
400 in-paralogs from Synechocystis.sp.
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 699 bits
Score difference with first non-orthologous sequence - M.jannaschii:699 Synechocystis.sp.:699

Q58318              	100.00%		P73362              	100.00%
Bootstrap support for Q58318 as seed ortholog is 100%.
Bootstrap support for P73362 as seed ortholog is 100%.

Group of orthologs #2. Best score 646 bits
Score difference with first non-orthologous sequence - M.jannaschii:646 Synechocystis.sp.:646

Q58574              	100.00%		P74208              	100.00%
Bootstrap support for Q58574 as seed ortholog is 100%.
Bootstrap support for P74208 as seed ortholog is 100%.

Group of orthologs #3. Best score 601 bits
Score difference with first non-orthologous sequence - M.jannaschii:601 Synechocystis.sp.:601

Q58776              	100.00%		Q55756              	100.00%
Bootstrap support for Q58776 as seed ortholog is 100%.
Bootstrap support for Q55756 as seed ortholog is 100%.

Group of orthologs #4. Best score 569 bits
Score difference with first non-orthologous sequence - M.jannaschii:569 Synechocystis.sp.:569

Q58660              	100.00%		P72644              	100.00%
Bootstrap support for Q58660 as seed ortholog is 100%.
Bootstrap support for P72644 as seed ortholog is 100%.

Group of orthologs #5. Best score 542 bits
Score difference with first non-orthologous sequence - M.jannaschii:542 Synechocystis.sp.:542

Q58836              	100.00%		P73020              	100.00%
Bootstrap support for Q58836 as seed ortholog is 100%.
Bootstrap support for P73020 as seed ortholog is 100%.

Group of orthologs #6. Best score 535 bits
Score difference with first non-orthologous sequence - M.jannaschii:535 Synechocystis.sp.:535

Q58626              	100.00%		Q55160              	100.00%
Bootstrap support for Q58626 as seed ortholog is 100%.
Bootstrap support for Q55160 as seed ortholog is 100%.

Group of orthologs #7. Best score 517 bits
Score difference with first non-orthologous sequence - M.jannaschii:517 Synechocystis.sp.:517

Q57962              	100.00%		Q55905              	100.00%
Bootstrap support for Q57962 as seed ortholog is 100%.
Bootstrap support for Q55905 as seed ortholog is 100%.

Group of orthologs #8. Best score 503 bits
Score difference with first non-orthologous sequence - M.jannaschii:503 Synechocystis.sp.:503

Q60179              	100.00%		Q59992              	100.00%
Bootstrap support for Q60179 as seed ortholog is 100%.
Bootstrap support for Q59992 as seed ortholog is 100%.

Group of orthologs #9. Best score 502 bits
Score difference with first non-orthologous sequence - M.jannaschii:502 Synechocystis.sp.:502

Q58672              	100.00%		P74689              	100.00%
Bootstrap support for Q58672 as seed ortholog is 100%.
Bootstrap support for P74689 as seed ortholog is 100%.

Group of orthologs #10. Best score 498 bits
Score difference with first non-orthologous sequence - M.jannaschii:324 Synechocystis.sp.:172

Q57725              	100.00%		P73913              	100.00%
Bootstrap support for Q57725 as seed ortholog is 100%.
Bootstrap support for P73913 as seed ortholog is 99%.

Group of orthologs #11. Best score 480 bits
Score difference with first non-orthologous sequence - M.jannaschii:480 Synechocystis.sp.:480

Q58783              	100.00%		P74008              	100.00%
Bootstrap support for Q58783 as seed ortholog is 100%.
Bootstrap support for P74008 as seed ortholog is 100%.

Group of orthologs #12. Best score 440 bits
Score difference with first non-orthologous sequence - M.jannaschii:254 Synechocystis.sp.:257

Q58413              	100.00%		Q55522              	100.00%
Bootstrap support for Q58413 as seed ortholog is 99%.
Bootstrap support for Q55522 as seed ortholog is 99%.

Group of orthologs #13. Best score 435 bits
Score difference with first non-orthologous sequence - M.jannaschii:435 Synechocystis.sp.:267

Q58424              	100.00%		P73821              	100.00%
Bootstrap support for Q58424 as seed ortholog is 100%.
Bootstrap support for P73821 as seed ortholog is 100%.

Group of orthologs #14. Best score 433 bits
Score difference with first non-orthologous sequence - M.jannaschii:316 Synechocystis.sp.:433

P61159              	100.00%		P73448              	100.00%
Bootstrap support for P61159 as seed ortholog is 100%.
Bootstrap support for P73448 as seed ortholog is 100%.

Group of orthologs #15. Best score 430 bits
Score difference with first non-orthologous sequence - M.jannaschii:323 Synechocystis.sp.:315

Q58357              	100.00%		P73505              	100.00%
Bootstrap support for Q58357 as seed ortholog is 100%.
Bootstrap support for P73505 as seed ortholog is 99%.

Group of orthologs #16. Best score 428 bits
Score difference with first non-orthologous sequence - M.jannaschii:428 Synechocystis.sp.:428

Q60173              	100.00%		P77972              	100.00%
Bootstrap support for Q60173 as seed ortholog is 100%.
Bootstrap support for P77972 as seed ortholog is 100%.

Group of orthologs #17. Best score 427 bits
Score difference with first non-orthologous sequence - M.jannaschii:427 Synechocystis.sp.:427

Q58123              	100.00%		Q55638              	100.00%
Bootstrap support for Q58123 as seed ortholog is 100%.
Bootstrap support for Q55638 as seed ortholog is 100%.

Group of orthologs #18. Best score 426 bits
Score difference with first non-orthologous sequence - M.jannaschii:426 Synechocystis.sp.:426

Q57657              	100.00%		Q55621              	100.00%
Bootstrap support for Q57657 as seed ortholog is 100%.
Bootstrap support for Q55621 as seed ortholog is 100%.

Group of orthologs #19. Best score 421 bits
Score difference with first non-orthologous sequence - M.jannaschii:421 Synechocystis.sp.:421

Q59037              	100.00%		P73340              	100.00%
Bootstrap support for Q59037 as seed ortholog is 100%.
Bootstrap support for P73340 as seed ortholog is 100%.

Group of orthologs #20. Best score 407 bits
Score difference with first non-orthologous sequence - M.jannaschii:407 Synechocystis.sp.:331

Q58881              	100.00%		Q55336              	100.00%
Bootstrap support for Q58881 as seed ortholog is 100%.
Bootstrap support for Q55336 as seed ortholog is 100%.

Group of orthologs #21. Best score 405 bits
Score difference with first non-orthologous sequence - M.jannaschii:405 Synechocystis.sp.:405

Q58432              	100.00%		Q55894              	100.00%
Bootstrap support for Q58432 as seed ortholog is 100%.
Bootstrap support for Q55894 as seed ortholog is 100%.

Group of orthologs #22. Best score 397 bits
Score difference with first non-orthologous sequence - M.jannaschii:311 Synechocystis.sp.:397

Q58020              	100.00%		Q55665              	100.00%
Bootstrap support for Q58020 as seed ortholog is 100%.
Bootstrap support for Q55665 as seed ortholog is 100%.

Group of orthologs #23. Best score 386 bits
Score difference with first non-orthologous sequence - M.jannaschii:143 Synechocystis.sp.:196

Q58595              	100.00%		P48576              	100.00%
Q58787              	19.12%		
Bootstrap support for Q58595 as seed ortholog is 99%.
Bootstrap support for P48576 as seed ortholog is 99%.

Group of orthologs #24. Best score 381 bits
Score difference with first non-orthologous sequence - M.jannaschii:381 Synechocystis.sp.:381

Q60174              	100.00%		P77973              	100.00%
Bootstrap support for Q60174 as seed ortholog is 100%.
Bootstrap support for P77973 as seed ortholog is 100%.

Group of orthologs #25. Best score 374 bits
Score difference with first non-orthologous sequence - M.jannaschii:374 Synechocystis.sp.:374

Q58938              	100.00%		P29107              	100.00%
Bootstrap support for Q58938 as seed ortholog is 100%.
Bootstrap support for P29107 as seed ortholog is 100%.

Group of orthologs #26. Best score 374 bits
Score difference with first non-orthologous sequence - M.jannaschii:374 Synechocystis.sp.:374

Q58875              	100.00%		P74535              	100.00%
Bootstrap support for Q58875 as seed ortholog is 100%.
Bootstrap support for P74535 as seed ortholog is 100%.

Group of orthologs #27. Best score 359 bits
Score difference with first non-orthologous sequence - M.jannaschii:359 Synechocystis.sp.:359

Q60178              	100.00%		P77969              	100.00%
Bootstrap support for Q60178 as seed ortholog is 100%.
Bootstrap support for P77969 as seed ortholog is 100%.

Group of orthologs #28. Best score 354 bits
Score difference with first non-orthologous sequence - M.jannaschii:354 Synechocystis.sp.:96

Q58321              	100.00%		P51634              	100.00%
Bootstrap support for Q58321 as seed ortholog is 100%.
Bootstrap support for P51634 as seed ortholog is 99%.

Group of orthologs #29. Best score 341 bits
Score difference with first non-orthologous sequence - M.jannaschii:341 Synechocystis.sp.:341

Q58815              	100.00%		P72720              	100.00%
Bootstrap support for Q58815 as seed ortholog is 100%.
Bootstrap support for P72720 as seed ortholog is 100%.

Group of orthologs #30. Best score 340 bits
Score difference with first non-orthologous sequence - M.jannaschii:196 Synechocystis.sp.:340

Q58131              	100.00%		P73133              	100.00%
Bootstrap support for Q58131 as seed ortholog is 100%.
Bootstrap support for P73133 as seed ortholog is 100%.

Group of orthologs #31. Best score 340 bits
Score difference with first non-orthologous sequence - M.jannaschii:340 Synechocystis.sp.:69

Q60356              	100.00%		P73479              	100.00%
Bootstrap support for Q60356 as seed ortholog is 100%.
Bootstrap support for P73479 as seed ortholog is 92%.

Group of orthologs #32. Best score 338 bits
Score difference with first non-orthologous sequence - M.jannaschii:338 Synechocystis.sp.:338

Q58575              	100.00%		P23353              	100.00%
Bootstrap support for Q58575 as seed ortholog is 100%.
Bootstrap support for P23353 as seed ortholog is 100%.

Group of orthologs #33. Best score 337 bits
Score difference with first non-orthologous sequence - M.jannaschii:186 Synechocystis.sp.:337

Q58454              	100.00%		P72834              	100.00%
Bootstrap support for Q58454 as seed ortholog is 99%.
Bootstrap support for P72834 as seed ortholog is 100%.

Group of orthologs #34. Best score 336 bits
Score difference with first non-orthologous sequence - M.jannaschii:127 Synechocystis.sp.:225

Q60295              	100.00%		Q6YRQ2              	100.00%
Bootstrap support for Q60295 as seed ortholog is 95%.
Bootstrap support for Q6YRQ2 as seed ortholog is 99%.

Group of orthologs #35. Best score 332 bits
Score difference with first non-orthologous sequence - M.jannaschii:332 Synechocystis.sp.:332

Q57908              	100.00%		Q55860              	100.00%
Bootstrap support for Q57908 as seed ortholog is 100%.
Bootstrap support for Q55860 as seed ortholog is 100%.

Group of orthologs #36. Best score 331 bits
Score difference with first non-orthologous sequence - M.jannaschii:213 Synechocystis.sp.:331

Q58592              	100.00%		P74018              	100.00%
Bootstrap support for Q58592 as seed ortholog is 100%.
Bootstrap support for P74018 as seed ortholog is 100%.

Group of orthologs #37. Best score 327 bits
Score difference with first non-orthologous sequence - M.jannaschii:327 Synechocystis.sp.:257

Q58860              	100.00%		P74193              	100.00%
Bootstrap support for Q58860 as seed ortholog is 100%.
Bootstrap support for P74193 as seed ortholog is 100%.

Group of orthologs #38. Best score 326 bits
Score difference with first non-orthologous sequence - M.jannaschii:326 Synechocystis.sp.:161

Q58623              	100.00%		P37367              	100.00%
                    	       		Q59999              	15.80%
                    	       		P74062              	13.65%
Bootstrap support for Q58623 as seed ortholog is 100%.
Bootstrap support for P37367 as seed ortholog is 99%.

Group of orthologs #39. Best score 322 bits
Score difference with first non-orthologous sequence - M.jannaschii:322 Synechocystis.sp.:255

Q58339              	100.00%		P74384              	100.00%
Bootstrap support for Q58339 as seed ortholog is 100%.
Bootstrap support for P74384 as seed ortholog is 100%.

Group of orthologs #40. Best score 321 bits
Score difference with first non-orthologous sequence - M.jannaschii:321 Synechocystis.sp.:321

Q57564              	100.00%		P72961              	100.00%
Bootstrap support for Q57564 as seed ortholog is 100%.
Bootstrap support for P72961 as seed ortholog is 100%.

Group of orthologs #41. Best score 316 bits
Score difference with first non-orthologous sequence - M.jannaschii:316 Synechocystis.sp.:316

Q57986              	100.00%		P73182              	100.00%
Bootstrap support for Q57986 as seed ortholog is 100%.
Bootstrap support for P73182 as seed ortholog is 100%.

Group of orthologs #42. Best score 312 bits
Score difference with first non-orthologous sequence - M.jannaschii:312 Synechocystis.sp.:312

Q58531              	100.00%		P49057              	100.00%
Bootstrap support for Q58531 as seed ortholog is 100%.
Bootstrap support for P49057 as seed ortholog is 100%.

Group of orthologs #43. Best score 312 bits
Score difference with first non-orthologous sequence - M.jannaschii:312 Synechocystis.sp.:312

Q57624              	100.00%		P74215              	100.00%
Bootstrap support for Q57624 as seed ortholog is 100%.
Bootstrap support for P74215 as seed ortholog is 100%.

Group of orthologs #44. Best score 310 bits
Score difference with first non-orthologous sequence - M.jannaschii:223 Synechocystis.sp.:25

Q58418              	100.00%		Q55196              	100.00%
                    	       		Q55195              	25.86%
Bootstrap support for Q58418 as seed ortholog is 100%.
Bootstrap support for Q55196 as seed ortholog is 80%.

Group of orthologs #45. Best score 307 bits
Score difference with first non-orthologous sequence - M.jannaschii:307 Synechocystis.sp.:307

Q57645              	100.00%		P74122              	100.00%
Bootstrap support for Q57645 as seed ortholog is 100%.
Bootstrap support for P74122 as seed ortholog is 100%.

Group of orthologs #46. Best score 306 bits
Score difference with first non-orthologous sequence - M.jannaschii:306 Synechocystis.sp.:306

Q57565              	100.00%		P74214              	100.00%
Bootstrap support for Q57565 as seed ortholog is 100%.
Bootstrap support for P74214 as seed ortholog is 100%.

Group of orthologs #47. Best score 305 bits
Score difference with first non-orthologous sequence - M.jannaschii:261 Synechocystis.sp.:305

Q57854              	100.00%		P74106              	100.00%
Bootstrap support for Q57854 as seed ortholog is 100%.
Bootstrap support for P74106 as seed ortholog is 100%.

Group of orthologs #48. Best score 303 bits
Score difference with first non-orthologous sequence - M.jannaschii:303 Synechocystis.sp.:72

Q58475              	100.00%		P20170              	100.00%
Bootstrap support for Q58475 as seed ortholog is 100%.
Bootstrap support for P20170 as seed ortholog is 94%.

Group of orthologs #49. Best score 300 bits
Score difference with first non-orthologous sequence - M.jannaschii:300 Synechocystis.sp.:167

Q58560              	100.00%		P73558              	100.00%
Bootstrap support for Q58560 as seed ortholog is 100%.
Bootstrap support for P73558 as seed ortholog is 99%.

Group of orthologs #50. Best score 299 bits
Score difference with first non-orthologous sequence - M.jannaschii:299 Synechocystis.sp.:83

Q58448              	100.00%		P74228              	100.00%
                    	       		P28371              	36.98%
                    	       		Q55421              	5.89%
Bootstrap support for Q58448 as seed ortholog is 100%.
Bootstrap support for P74228 as seed ortholog is 98%.

Group of orthologs #51. Best score 299 bits
Score difference with first non-orthologous sequence - M.jannaschii:151 Synechocystis.sp.:299

Q57896              	100.00%		P74497              	100.00%
Bootstrap support for Q57896 as seed ortholog is 99%.
Bootstrap support for P74497 as seed ortholog is 100%.

Group of orthologs #52. Best score 298 bits
Score difference with first non-orthologous sequence - M.jannaschii:298 Synechocystis.sp.:298

Q57816              	100.00%		P73456              	100.00%
Q58039              	10.55%		
Bootstrap support for Q57816 as seed ortholog is 100%.
Bootstrap support for P73456 as seed ortholog is 100%.

Group of orthologs #53. Best score 298 bits
Score difference with first non-orthologous sequence - M.jannaschii:298 Synechocystis.sp.:298

Q58201              	100.00%		P73257              	100.00%
Bootstrap support for Q58201 as seed ortholog is 100%.
Bootstrap support for P73257 as seed ortholog is 100%.

Group of orthologs #54. Best score 297 bits
Score difference with first non-orthologous sequence - M.jannaschii:297 Synechocystis.sp.:297

Q58425              	100.00%		P74587              	100.00%
Bootstrap support for Q58425 as seed ortholog is 100%.
Bootstrap support for P74587 as seed ortholog is 100%.

Group of orthologs #55. Best score 295 bits
Score difference with first non-orthologous sequence - M.jannaschii:295 Synechocystis.sp.:295

Q60182              	100.00%		P77961              	100.00%
Bootstrap support for Q60182 as seed ortholog is 100%.
Bootstrap support for P77961 as seed ortholog is 100%.

Group of orthologs #56. Best score 294 bits
Score difference with first non-orthologous sequence - M.jannaschii:294 Synechocystis.sp.:164

Q58851              	100.00%		P73058              	100.00%
Bootstrap support for Q58851 as seed ortholog is 100%.
Bootstrap support for P73058 as seed ortholog is 100%.

Group of orthologs #57. Best score 291 bits
Score difference with first non-orthologous sequence - M.jannaschii:183 Synechocystis.sp.:193

Q59002              	100.00%		P73369              	100.00%
Bootstrap support for Q59002 as seed ortholog is 99%.
Bootstrap support for P73369 as seed ortholog is 99%.

Group of orthologs #58. Best score 289 bits
Score difference with first non-orthologous sequence - M.jannaschii:289 Synechocystis.sp.:208

Q58015              	100.00%		P73682              	100.00%
Bootstrap support for Q58015 as seed ortholog is 100%.
Bootstrap support for P73682 as seed ortholog is 100%.

Group of orthologs #59. Best score 287 bits
Score difference with first non-orthologous sequence - M.jannaschii:287 Synechocystis.sp.:287

Q58400              	100.00%		P72620              	100.00%
Bootstrap support for Q58400 as seed ortholog is 100%.
Bootstrap support for P72620 as seed ortholog is 100%.

Group of orthologs #60. Best score 286 bits
Score difference with first non-orthologous sequence - M.jannaschii:286 Synechocystis.sp.:286

Q60382              	100.00%		P73326              	100.00%
Bootstrap support for Q60382 as seed ortholog is 100%.
Bootstrap support for P73326 as seed ortholog is 100%.

Group of orthologs #61. Best score 286 bits
Score difference with first non-orthologous sequence - M.jannaschii:206 Synechocystis.sp.:221

Q58083              	100.00%		Q55804              	100.00%
Bootstrap support for Q58083 as seed ortholog is 100%.
Bootstrap support for Q55804 as seed ortholog is 100%.

Group of orthologs #62. Best score 285 bits
Score difference with first non-orthologous sequence - M.jannaschii:285 Synechocystis.sp.:285

Q58632              	100.00%		P54205              	100.00%
Bootstrap support for Q58632 as seed ortholog is 100%.
Bootstrap support for P54205 as seed ortholog is 100%.

Group of orthologs #63. Best score 279 bits
Score difference with first non-orthologous sequence - M.jannaschii:279 Synechocystis.sp.:279

Q57984              	100.00%		P74423              	100.00%
Bootstrap support for Q57984 as seed ortholog is 100%.
Bootstrap support for P74423 as seed ortholog is 100%.

Group of orthologs #64. Best score 277 bits
Score difference with first non-orthologous sequence - M.jannaschii:277 Synechocystis.sp.:67

Q58466              	100.00%		P73981              	100.00%
Bootstrap support for Q58466 as seed ortholog is 100%.
Bootstrap support for P73981 as seed ortholog is 96%.

Group of orthologs #65. Best score 276 bits
Score difference with first non-orthologous sequence - M.jannaschii:276 Synechocystis.sp.:276

Q58369              	100.00%		P74281              	100.00%
Bootstrap support for Q58369 as seed ortholog is 100%.
Bootstrap support for P74281 as seed ortholog is 100%.

Group of orthologs #66. Best score 272 bits
Score difference with first non-orthologous sequence - M.jannaschii:206 Synechocystis.sp.:189

Q60317              	100.00%		Q55128              	100.00%
Bootstrap support for Q60317 as seed ortholog is 100%.
Bootstrap support for Q55128 as seed ortholog is 100%.

Group of orthologs #67. Best score 267 bits
Score difference with first non-orthologous sequence - M.jannaschii:267 Synechocystis.sp.:267

Q58291              	100.00%		Q55497              	100.00%
Bootstrap support for Q58291 as seed ortholog is 100%.
Bootstrap support for Q55497 as seed ortholog is 100%.

Group of orthologs #68. Best score 258 bits
Score difference with first non-orthologous sequence - M.jannaschii:258 Synechocystis.sp.:258

Q57572              	100.00%		P73534              	100.00%
                    	       		Q55863              	13.93%
Bootstrap support for Q57572 as seed ortholog is 100%.
Bootstrap support for P73534 as seed ortholog is 100%.

Group of orthologs #69. Best score 255 bits
Score difference with first non-orthologous sequence - M.jannaschii:255 Synechocystis.sp.:255

Q58089              	100.00%		P73438              	100.00%
Bootstrap support for Q58089 as seed ortholog is 100%.
Bootstrap support for P73438 as seed ortholog is 100%.

Group of orthologs #70. Best score 248 bits
Score difference with first non-orthologous sequence - M.jannaschii:200 Synechocystis.sp.:174

Q57686              	100.00%		P73617              	100.00%
Bootstrap support for Q57686 as seed ortholog is 100%.
Bootstrap support for P73617 as seed ortholog is 100%.

Group of orthologs #71. Best score 247 bits
Score difference with first non-orthologous sequence - M.jannaschii:247 Synechocystis.sp.:247

Q58496              	100.00%		P54899              	100.00%
Bootstrap support for Q58496 as seed ortholog is 100%.
Bootstrap support for P54899 as seed ortholog is 100%.

Group of orthologs #72. Best score 247 bits
Score difference with first non-orthologous sequence - M.jannaschii:247 Synechocystis.sp.:247

Q58374              	100.00%		Q55959              	100.00%
Bootstrap support for Q58374 as seed ortholog is 100%.
Bootstrap support for Q55959 as seed ortholog is 100%.

Group of orthologs #73. Best score 243 bits
Score difference with first non-orthologous sequence - M.jannaschii:243 Synechocystis.sp.:243

Q58739              	100.00%		P54147              	100.00%
Q60366              	9.85%		P72935              	12.06%
Bootstrap support for Q58739 as seed ortholog is 100%.
Bootstrap support for P54147 as seed ortholog is 100%.

Group of orthologs #74. Best score 243 bits
Score difference with first non-orthologous sequence - M.jannaschii:243 Synechocystis.sp.:243

Q58826              	100.00%		P72811              	100.00%
Bootstrap support for Q58826 as seed ortholog is 100%.
Bootstrap support for P72811 as seed ortholog is 100%.

Group of orthologs #75. Best score 242 bits
Score difference with first non-orthologous sequence - M.jannaschii:199 Synechocystis.sp.:242

Q57731              	100.00%		P53383              	100.00%
Bootstrap support for Q57731 as seed ortholog is 100%.
Bootstrap support for P53383 as seed ortholog is 100%.

Group of orthologs #76. Best score 241 bits
Score difference with first non-orthologous sequence - M.jannaschii:241 Synechocystis.sp.:241

Q58816              	100.00%		P73002              	100.00%
Bootstrap support for Q58816 as seed ortholog is 100%.
Bootstrap support for P73002 as seed ortholog is 100%.

Group of orthologs #77. Best score 237 bits
Score difference with first non-orthologous sequence - M.jannaschii:156 Synechocystis.sp.:28

Q57855              	100.00%		P73265              	100.00%
Bootstrap support for Q57855 as seed ortholog is 100%.
Bootstrap support for P73265 as seed ortholog is 83%.

Group of orthologs #78. Best score 236 bits
Score difference with first non-orthologous sequence - M.jannaschii:236 Synechocystis.sp.:236

Q57695              	100.00%		Q55513              	100.00%
Bootstrap support for Q57695 as seed ortholog is 100%.
Bootstrap support for Q55513 as seed ortholog is 100%.

Group of orthologs #79. Best score 235 bits
Score difference with first non-orthologous sequence - M.jannaschii:235 Synechocystis.sp.:235

Q57850              	100.00%		P74578              	100.00%
Bootstrap support for Q57850 as seed ortholog is 100%.
Bootstrap support for P74578 as seed ortholog is 100%.

Group of orthologs #80. Best score 233 bits
Score difference with first non-orthologous sequence - M.jannaschii:233 Synechocystis.sp.:233

Q58694              	100.00%		P74770              	100.00%
Bootstrap support for Q58694 as seed ortholog is 100%.
Bootstrap support for P74770 as seed ortholog is 100%.

Group of orthologs #81. Best score 227 bits
Score difference with first non-orthologous sequence - M.jannaschii:227 Synechocystis.sp.:227

Q58992              	100.00%		P77962              	100.00%
Bootstrap support for Q58992 as seed ortholog is 100%.
Bootstrap support for P77962 as seed ortholog is 100%.

Group of orthologs #82. Best score 226 bits
Score difference with first non-orthologous sequence - M.jannaschii:44 Synechocystis.sp.:226

Q58458              	100.00%		P74178              	100.00%
Bootstrap support for Q58458 as seed ortholog is 81%.
Bootstrap support for P74178 as seed ortholog is 100%.

Group of orthologs #83. Best score 221 bits
Score difference with first non-orthologous sequence - M.jannaschii:133 Synechocystis.sp.:61

Q58206              	100.00%		Q55490              	100.00%
Q58903              	5.76%		
Bootstrap support for Q58206 as seed ortholog is 100%.
Bootstrap support for Q55490 as seed ortholog is 98%.

Group of orthologs #84. Best score 221 bits
Score difference with first non-orthologous sequence - M.jannaschii:221 Synechocystis.sp.:221

Q58271              	100.00%		P54123              	100.00%
Bootstrap support for Q58271 as seed ortholog is 100%.
Bootstrap support for P54123 as seed ortholog is 100%.

Group of orthologs #85. Best score 217 bits
Score difference with first non-orthologous sequence - M.jannaschii:217 Synechocystis.sp.:62

Q58403              	100.00%		P73754              	100.00%
Bootstrap support for Q58403 as seed ortholog is 100%.
Bootstrap support for P73754 as seed ortholog is 90%.

Group of orthologs #86. Best score 217 bits
Score difference with first non-orthologous sequence - M.jannaschii:217 Synechocystis.sp.:168

Q58497              	100.00%		Q55484              	100.00%
Bootstrap support for Q58497 as seed ortholog is 100%.
Bootstrap support for Q55484 as seed ortholog is 99%.

Group of orthologs #87. Best score 215 bits
Score difference with first non-orthologous sequence - M.jannaschii:215 Synechocystis.sp.:87

Q58409              	100.00%		P54384              	100.00%
P81291              	28.96%		
Bootstrap support for Q58409 as seed ortholog is 100%.
Bootstrap support for P54384 as seed ortholog is 96%.

Group of orthologs #88. Best score 212 bits
Score difference with first non-orthologous sequence - M.jannaschii:212 Synechocystis.sp.:212

Q58987              	100.00%		P73471              	100.00%
Bootstrap support for Q58987 as seed ortholog is 100%.
Bootstrap support for P73471 as seed ortholog is 100%.

Group of orthologs #89. Best score 210 bits
Score difference with first non-orthologous sequence - M.jannaschii:210 Synechocystis.sp.:210

Q58767              	100.00%		Q55482              	100.00%
Bootstrap support for Q58767 as seed ortholog is 100%.
Bootstrap support for Q55482 as seed ortholog is 100%.

Group of orthologs #90. Best score 209 bits
Score difference with first non-orthologous sequence - M.jannaschii:209 Synechocystis.sp.:209

Q59050              	100.00%		P73637              	100.00%
Bootstrap support for Q59050 as seed ortholog is 100%.
Bootstrap support for P73637 as seed ortholog is 100%.

Group of orthologs #91. Best score 208 bits
Score difference with first non-orthologous sequence - M.jannaschii:208 Synechocystis.sp.:49

Q57604              	100.00%		P73132              	100.00%
Q58752              	26.64%		
Bootstrap support for Q57604 as seed ortholog is 100%.
Bootstrap support for P73132 as seed ortholog is 93%.

Group of orthologs #92. Best score 208 bits
Score difference with first non-orthologous sequence - M.jannaschii:208 Synechocystis.sp.:208

Q58058              	100.00%		P74421              	100.00%
Bootstrap support for Q58058 as seed ortholog is 100%.
Bootstrap support for P74421 as seed ortholog is 100%.

Group of orthologs #93. Best score 208 bits
Score difference with first non-orthologous sequence - M.jannaschii:208 Synechocystis.sp.:208

Q58998              	100.00%		Q55766              	100.00%
Bootstrap support for Q58998 as seed ortholog is 100%.
Bootstrap support for Q55766 as seed ortholog is 100%.

Group of orthologs #94. Best score 207 bits
Score difference with first non-orthologous sequence - M.jannaschii:207 Synechocystis.sp.:207

Q58421              	100.00%		Q55199              	100.00%
Bootstrap support for Q58421 as seed ortholog is 100%.
Bootstrap support for Q55199 as seed ortholog is 100%.

Group of orthologs #95. Best score 207 bits
Score difference with first non-orthologous sequence - M.jannaschii:207 Synechocystis.sp.:207

Q58375              	100.00%		Q55749              	100.00%
Bootstrap support for Q58375 as seed ortholog is 100%.
Bootstrap support for Q55749 as seed ortholog is 100%.

Group of orthologs #96. Best score 205 bits
Score difference with first non-orthologous sequence - M.jannaschii:205 Synechocystis.sp.:205

Q58272              	100.00%		P74287              	100.00%
Bootstrap support for Q58272 as seed ortholog is 100%.
Bootstrap support for P74287 as seed ortholog is 100%.

Group of orthologs #97. Best score 205 bits
Score difference with first non-orthologous sequence - M.jannaschii:26 Synechocystis.sp.:205

Q59046              	100.00%		P73810              	100.00%
Bootstrap support for Q59046 as seed ortholog is 48%.
Alternative seed ortholog is Q58907 (26 bits away from this cluster)
Bootstrap support for P73810 as seed ortholog is 100%.

Group of orthologs #98. Best score 202 bits
Score difference with first non-orthologous sequence - M.jannaschii:122 Synechocystis.sp.:141

Q58659              	100.00%		Q55729              	100.00%
Bootstrap support for Q58659 as seed ortholog is 99%.
Bootstrap support for Q55729 as seed ortholog is 99%.

Group of orthologs #99. Best score 201 bits
Score difference with first non-orthologous sequence - M.jannaschii:201 Synechocystis.sp.:140

Q57925              	100.00%		Q59975              	100.00%
Bootstrap support for Q57925 as seed ortholog is 100%.
Bootstrap support for Q59975 as seed ortholog is 99%.

Group of orthologs #100. Best score 200 bits
Score difference with first non-orthologous sequence - M.jannaschii:200 Synechocystis.sp.:200

Q57981              	100.00%		P73290              	100.00%
Bootstrap support for Q57981 as seed ortholog is 100%.
Bootstrap support for P73290 as seed ortholog is 100%.

Group of orthologs #101. Best score 199 bits
Score difference with first non-orthologous sequence - M.jannaschii:199 Synechocystis.sp.:199

Q57991              	100.00%		P74569              	100.00%
Bootstrap support for Q57991 as seed ortholog is 100%.
Bootstrap support for P74569 as seed ortholog is 100%.

Group of orthologs #102. Best score 196 bits
Score difference with first non-orthologous sequence - M.jannaschii:196 Synechocystis.sp.:196

Q58130              	100.00%		P73960              	100.00%
Bootstrap support for Q58130 as seed ortholog is 100%.
Bootstrap support for P73960 as seed ortholog is 100%.

Group of orthologs #103. Best score 195 bits
Score difference with first non-orthologous sequence - M.jannaschii:195 Synechocystis.sp.:47

Q58806              	100.00%		Q55585              	100.00%
Bootstrap support for Q58806 as seed ortholog is 100%.
Bootstrap support for Q55585 as seed ortholog is 86%.

Group of orthologs #104. Best score 193 bits
Score difference with first non-orthologous sequence - M.jannaschii:47 Synechocystis.sp.:193

Q57770              	100.00%		P74227              	100.00%
Bootstrap support for Q57770 as seed ortholog is 86%.
Bootstrap support for P74227 as seed ortholog is 100%.

Group of orthologs #105. Best score 191 bits
Score difference with first non-orthologous sequence - M.jannaschii:151 Synechocystis.sp.:191

Q57888              	100.00%		P73191              	100.00%
Bootstrap support for Q57888 as seed ortholog is 99%.
Bootstrap support for P73191 as seed ortholog is 100%.

Group of orthologs #106. Best score 191 bits
Score difference with first non-orthologous sequence - M.jannaschii:108 Synechocystis.sp.:191

Q58692              	100.00%		P73538              	100.00%
Bootstrap support for Q58692 as seed ortholog is 99%.
Bootstrap support for P73538 as seed ortholog is 100%.

Group of orthologs #107. Best score 191 bits
Score difference with first non-orthologous sequence - M.jannaschii:121 Synechocystis.sp.:57

Q58663              	100.00%		Q55164              	100.00%
Bootstrap support for Q58663 as seed ortholog is 99%.
Bootstrap support for Q55164 as seed ortholog is 97%.

Group of orthologs #108. Best score 191 bits
Score difference with first non-orthologous sequence - M.jannaschii:191 Synechocystis.sp.:191

Q59042              	100.00%		Q55843              	100.00%
Bootstrap support for Q59042 as seed ortholog is 100%.
Bootstrap support for Q55843 as seed ortholog is 100%.

Group of orthologs #109. Best score 188 bits
Score difference with first non-orthologous sequence - M.jannaschii:188 Synechocystis.sp.:188

Q60180              	100.00%		P77960              	100.00%
Bootstrap support for Q60180 as seed ortholog is 100%.
Bootstrap support for P77960 as seed ortholog is 100%.

Group of orthologs #110. Best score 186 bits
Score difference with first non-orthologous sequence - M.jannaschii:97 Synechocystis.sp.:186

Q57552              	100.00%		P72590              	100.00%
                    	       		P72591              	6.96%
Bootstrap support for Q57552 as seed ortholog is 99%.
Bootstrap support for P72590 as seed ortholog is 100%.

Group of orthologs #111. Best score 186 bits
Score difference with first non-orthologous sequence - M.jannaschii:186 Synechocystis.sp.:186

Q58515              	100.00%		P72966              	100.00%
Bootstrap support for Q58515 as seed ortholog is 100%.
Bootstrap support for P72966 as seed ortholog is 100%.

Group of orthologs #112. Best score 186 bits
Score difference with first non-orthologous sequence - M.jannaschii:141 Synechocystis.sp.:186

Q58973              	100.00%		P72694              	100.00%
Bootstrap support for Q58973 as seed ortholog is 100%.
Bootstrap support for P72694 as seed ortholog is 100%.

Group of orthologs #113. Best score 186 bits
Score difference with first non-orthologous sequence - M.jannaschii:186 Synechocystis.sp.:186

Q57629              	100.00%		P74601              	100.00%
Bootstrap support for Q57629 as seed ortholog is 100%.
Bootstrap support for P74601 as seed ortholog is 100%.

Group of orthologs #114. Best score 185 bits
Score difference with first non-orthologous sequence - M.jannaschii:185 Synechocystis.sp.:185

Q58997              	100.00%		P52986              	100.00%
Bootstrap support for Q58997 as seed ortholog is 100%.
Bootstrap support for P52986 as seed ortholog is 100%.

Group of orthologs #115. Best score 185 bits
Score difference with first non-orthologous sequence - M.jannaschii:185 Synechocystis.sp.:185

Q58897              	100.00%		Q55132              	100.00%
Bootstrap support for Q58897 as seed ortholog is 100%.
Bootstrap support for Q55132 as seed ortholog is 100%.

Group of orthologs #116. Best score 184 bits
Score difference with first non-orthologous sequence - M.jannaschii:184 Synechocystis.sp.:184

Q58347              	100.00%		P74232              	100.00%
Bootstrap support for Q58347 as seed ortholog is 100%.
Bootstrap support for P74232 as seed ortholog is 100%.

Group of orthologs #117. Best score 183 bits
Score difference with first non-orthologous sequence - M.jannaschii:183 Synechocystis.sp.:66

Q58406              	100.00%		Q55653              	100.00%
Bootstrap support for Q58406 as seed ortholog is 100%.
Bootstrap support for Q55653 as seed ortholog is 91%.

Group of orthologs #118. Best score 183 bits
Score difference with first non-orthologous sequence - M.jannaschii:183 Synechocystis.sp.:183

Q58991              	100.00%		P80046              	100.00%
Bootstrap support for Q58991 as seed ortholog is 100%.
Bootstrap support for P80046 as seed ortholog is 100%.

Group of orthologs #119. Best score 181 bits
Score difference with first non-orthologous sequence - M.jannaschii:181 Synechocystis.sp.:181

Q57656              	100.00%		Q55422              	100.00%
Bootstrap support for Q57656 as seed ortholog is 100%.
Bootstrap support for Q55422 as seed ortholog is 100%.

Group of orthologs #120. Best score 181 bits
Score difference with first non-orthologous sequence - M.jannaschii:181 Synechocystis.sp.:181

Q58617              	100.00%		Q6YRQ9              	100.00%
Bootstrap support for Q58617 as seed ortholog is 100%.
Bootstrap support for Q6YRQ9 as seed ortholog is 100%.

Group of orthologs #121. Best score 180 bits
Score difference with first non-orthologous sequence - M.jannaschii:180 Synechocystis.sp.:180

Q58445              	100.00%		P74177              	100.00%
Bootstrap support for Q58445 as seed ortholog is 100%.
Bootstrap support for P74177 as seed ortholog is 100%.

Group of orthologs #122. Best score 179 bits
Score difference with first non-orthologous sequence - M.jannaschii:179 Synechocystis.sp.:179

Q57739              	100.00%		P73930              	100.00%
Bootstrap support for Q57739 as seed ortholog is 100%.
Bootstrap support for P73930 as seed ortholog is 100%.

Group of orthologs #123. Best score 177 bits
Score difference with first non-orthologous sequence - M.jannaschii:95 Synechocystis.sp.:46

Q58664              	100.00%		P73650              	100.00%
Bootstrap support for Q58664 as seed ortholog is 99%.
Bootstrap support for P73650 as seed ortholog is 94%.

Group of orthologs #124. Best score 177 bits
Score difference with first non-orthologous sequence - M.jannaschii:177 Synechocystis.sp.:177

Q58484              	100.00%		P74591              	100.00%
Bootstrap support for Q58484 as seed ortholog is 100%.
Bootstrap support for P74591 as seed ortholog is 100%.

Group of orthologs #125. Best score 176 bits
Score difference with first non-orthologous sequence - M.jannaschii:176 Synechocystis.sp.:176

Q58731              	100.00%		Q55797              	100.00%
Bootstrap support for Q58731 as seed ortholog is 100%.
Bootstrap support for Q55797 as seed ortholog is 100%.

Group of orthologs #126. Best score 175 bits
Score difference with first non-orthologous sequence - M.jannaschii:175 Synechocystis.sp.:175

Q58526              	100.00%		P73965              	100.00%
Bootstrap support for Q58526 as seed ortholog is 100%.
Bootstrap support for P73965 as seed ortholog is 100%.

Group of orthologs #127. Best score 174 bits
Score difference with first non-orthologous sequence - M.jannaschii:130 Synechocystis.sp.:174

Q58289              	100.00%		P28373              	100.00%
Bootstrap support for Q58289 as seed ortholog is 99%.
Bootstrap support for P28373 as seed ortholog is 100%.

Group of orthologs #128. Best score 173 bits
Score difference with first non-orthologous sequence - M.jannaschii:173 Synechocystis.sp.:173

Q58273              	100.00%		Q55771              	100.00%
Q58153              	54.25%		
Bootstrap support for Q58273 as seed ortholog is 100%.
Bootstrap support for Q55771 as seed ortholog is 100%.

Group of orthologs #129. Best score 173 bits
Score difference with first non-orthologous sequence - M.jannaschii:8 Synechocystis.sp.:62

Q58283              	100.00%		P72592              	100.00%
Bootstrap support for Q58283 as seed ortholog is 61%.
Alternative seed ortholog is Q57554 (8 bits away from this cluster)
Bootstrap support for P72592 as seed ortholog is 99%.

Group of orthologs #130. Best score 173 bits
Score difference with first non-orthologous sequence - M.jannaschii:173 Synechocystis.sp.:173

Q58365              	100.00%		P73807              	100.00%
Bootstrap support for Q58365 as seed ortholog is 100%.
Bootstrap support for P73807 as seed ortholog is 100%.

Group of orthologs #131. Best score 173 bits
Score difference with first non-orthologous sequence - M.jannaschii:119 Synechocystis.sp.:173

Q58057              	100.00%		Q55946              	100.00%
Bootstrap support for Q58057 as seed ortholog is 99%.
Bootstrap support for Q55946 as seed ortholog is 100%.

Group of orthologs #132. Best score 172 bits
Score difference with first non-orthologous sequence - M.jannaschii:59 Synechocystis.sp.:53

Q58762              	100.00%		P74548              	100.00%
                    	       		Q79EE4              	6.84%
                    	       		P74127              	6.46%
Bootstrap support for Q58762 as seed ortholog is 97%.
Bootstrap support for P74548 as seed ortholog is 95%.

Group of orthologs #133. Best score 171 bits
Score difference with first non-orthologous sequence - M.jannaschii:171 Synechocystis.sp.:171

Q60172              	100.00%		P28463              	100.00%
Bootstrap support for Q60172 as seed ortholog is 100%.
Bootstrap support for P28463 as seed ortholog is 100%.

Group of orthologs #134. Best score 171 bits
Score difference with first non-orthologous sequence - M.jannaschii:171 Synechocystis.sp.:78

Q58786              	100.00%		P72859              	100.00%
Bootstrap support for Q58786 as seed ortholog is 100%.
Bootstrap support for P72859 as seed ortholog is 98%.

Group of orthologs #135. Best score 171 bits
Score difference with first non-orthologous sequence - M.jannaschii:171 Synechocystis.sp.:171

Q58718              	100.00%		P73012              	100.00%
Bootstrap support for Q58718 as seed ortholog is 100%.
Bootstrap support for P73012 as seed ortholog is 100%.

Group of orthologs #136. Best score 171 bits
Score difference with first non-orthologous sequence - M.jannaschii:74 Synechocystis.sp.:48

Q58501              	100.00%		Q55689              	100.00%
Bootstrap support for Q58501 as seed ortholog is 98%.
Bootstrap support for Q55689 as seed ortholog is 89%.

Group of orthologs #137. Best score 170 bits
Score difference with first non-orthologous sequence - M.jannaschii:170 Synechocystis.sp.:170

Q58277              	100.00%		P73127              	100.00%
                    	       		Q55803              	6.39%
Bootstrap support for Q58277 as seed ortholog is 100%.
Bootstrap support for P73127 as seed ortholog is 100%.

Group of orthologs #138. Best score 170 bits
Score difference with first non-orthologous sequence - M.jannaschii:170 Synechocystis.sp.:170

Q58420              	100.00%		P73786              	100.00%
Bootstrap support for Q58420 as seed ortholog is 100%.
Bootstrap support for P73786 as seed ortholog is 100%.

Group of orthologs #139. Best score 170 bits
Score difference with first non-orthologous sequence - M.jannaschii:170 Synechocystis.sp.:170

Q59011              	100.00%		P73853              	100.00%
Bootstrap support for Q59011 as seed ortholog is 100%.
Bootstrap support for P73853 as seed ortholog is 100%.

Group of orthologs #140. Best score 169 bits
Score difference with first non-orthologous sequence - M.jannaschii:169 Synechocystis.sp.:169

Q57663              	100.00%		P72927              	100.00%
Bootstrap support for Q57663 as seed ortholog is 100%.
Bootstrap support for P72927 as seed ortholog is 100%.

Group of orthologs #141. Best score 169 bits
Score difference with first non-orthologous sequence - M.jannaschii:169 Synechocystis.sp.:27

Q58270              	100.00%		P72683              	100.00%
Bootstrap support for Q58270 as seed ortholog is 100%.
Bootstrap support for P72683 as seed ortholog is 76%.

Group of orthologs #142. Best score 169 bits
Score difference with first non-orthologous sequence - M.jannaschii:103 Synechocystis.sp.:169

Q58927              	100.00%		P74561              	100.00%
Bootstrap support for Q58927 as seed ortholog is 99%.
Bootstrap support for P74561 as seed ortholog is 100%.

Group of orthologs #143. Best score 167 bits
Score difference with first non-orthologous sequence - M.jannaschii:167 Synechocystis.sp.:167

Q58093              	100.00%		P74061              	100.00%
Bootstrap support for Q58093 as seed ortholog is 100%.
Bootstrap support for P74061 as seed ortholog is 100%.

Group of orthologs #144. Best score 167 bits
Score difference with first non-orthologous sequence - M.jannaschii:167 Synechocystis.sp.:167

Q57689              	100.00%		Q55486              	100.00%
Bootstrap support for Q57689 as seed ortholog is 100%.
Bootstrap support for Q55486 as seed ortholog is 100%.

Group of orthologs #145. Best score 165 bits
Score difference with first non-orthologous sequence - M.jannaschii:165 Synechocystis.sp.:96

Q58889              	100.00%		P73437              	100.00%
                    	       		P72991              	36.08%
                    	       		P73179              	33.52%
                    	       		Q55700              	33.52%
Bootstrap support for Q58889 as seed ortholog is 100%.
Bootstrap support for P73437 as seed ortholog is 99%.

Group of orthologs #146. Best score 165 bits
Score difference with first non-orthologous sequence - M.jannaschii:165 Synechocystis.sp.:165

Q58376              	100.00%		P74381              	100.00%
                    	       		P73260              	7.38%
Bootstrap support for Q58376 as seed ortholog is 100%.
Bootstrap support for P74381 as seed ortholog is 100%.

Group of orthologs #147. Best score 165 bits
Score difference with first non-orthologous sequence - M.jannaschii:77 Synechocystis.sp.:27

Q58488              	100.00%		Q55740              	100.00%
Q58967              	5.10%		
Bootstrap support for Q58488 as seed ortholog is 99%.
Bootstrap support for Q55740 as seed ortholog is 82%.

Group of orthologs #148. Best score 165 bits
Score difference with first non-orthologous sequence - M.jannaschii:165 Synechocystis.sp.:165

Q58993              	100.00%		P73003              	100.00%
Bootstrap support for Q58993 as seed ortholog is 100%.
Bootstrap support for P73003 as seed ortholog is 100%.

Group of orthologs #149. Best score 164 bits
Score difference with first non-orthologous sequence - M.jannaschii:164 Synechocystis.sp.:164

Q58519              	100.00%		P74667              	100.00%
Bootstrap support for Q58519 as seed ortholog is 100%.
Bootstrap support for P74667 as seed ortholog is 100%.

Group of orthologs #150. Best score 163 bits
Score difference with first non-orthologous sequence - M.jannaschii:163 Synechocystis.sp.:163

Q58419              	100.00%		P73787              	100.00%
Bootstrap support for Q58419 as seed ortholog is 100%.
Bootstrap support for P73787 as seed ortholog is 100%.

Group of orthologs #151. Best score 162 bits
Score difference with first non-orthologous sequence - M.jannaschii:162 Synechocystis.sp.:162

Q59027              	100.00%		P72962              	100.00%
Bootstrap support for Q59027 as seed ortholog is 100%.
Bootstrap support for P72962 as seed ortholog is 100%.

Group of orthologs #152. Best score 162 bits
Score difference with first non-orthologous sequence - M.jannaschii:162 Synechocystis.sp.:86

Q58542              	100.00%		Q55794              	100.00%
Bootstrap support for Q58542 as seed ortholog is 100%.
Bootstrap support for Q55794 as seed ortholog is 99%.

Group of orthologs #153. Best score 161 bits
Score difference with first non-orthologous sequence - M.jannaschii:161 Synechocystis.sp.:47

Q58671              	100.00%		Q55736              	100.00%
Bootstrap support for Q58671 as seed ortholog is 100%.
Bootstrap support for Q55736 as seed ortholog is 89%.

Group of orthologs #154. Best score 160 bits
Score difference with first non-orthologous sequence - M.jannaschii:113 Synechocystis.sp.:68

Q57884              	100.00%		P74218              	100.00%
Bootstrap support for Q57884 as seed ortholog is 99%.
Bootstrap support for P74218 as seed ortholog is 99%.

Group of orthologs #155. Best score 159 bits
Score difference with first non-orthologous sequence - M.jannaschii:159 Synechocystis.sp.:159

Q58142              	100.00%		Q55393              	100.00%
Q57954              	39.39%		P72723              	54.74%
Q58158              	17.10%		P74373              	32.36%
                    	       		P72721              	20.06%
Bootstrap support for Q58142 as seed ortholog is 100%.
Bootstrap support for Q55393 as seed ortholog is 100%.

Group of orthologs #156. Best score 159 bits
Score difference with first non-orthologous sequence - M.jannaschii:159 Synechocystis.sp.:159

Q57989              	100.00%		P73660              	100.00%
Bootstrap support for Q57989 as seed ortholog is 100%.
Bootstrap support for P73660 as seed ortholog is 100%.

Group of orthologs #157. Best score 158 bits
Score difference with first non-orthologous sequence - M.jannaschii:72 Synechocystis.sp.:158

Q58639              	100.00%		P73220              	100.00%
Bootstrap support for Q58639 as seed ortholog is 91%.
Bootstrap support for P73220 as seed ortholog is 100%.

Group of orthologs #158. Best score 158 bits
Score difference with first non-orthologous sequence - M.jannaschii:158 Synechocystis.sp.:158

Q58899              	100.00%		Q55867              	100.00%
Bootstrap support for Q58899 as seed ortholog is 100%.
Bootstrap support for Q55867 as seed ortholog is 100%.

Group of orthologs #159. Best score 157 bits
Score difference with first non-orthologous sequence - M.jannaschii:157 Synechocystis.sp.:157

Q58237              	100.00%		P72655              	100.00%
Bootstrap support for Q58237 as seed ortholog is 100%.
Bootstrap support for P72655 as seed ortholog is 100%.

Group of orthologs #160. Best score 157 bits
Score difference with first non-orthologous sequence - M.jannaschii:157 Synechocystis.sp.:6

Q57856              	100.00%		P73266              	100.00%
Bootstrap support for Q57856 as seed ortholog is 100%.
Bootstrap support for P73266 as seed ortholog is 61%.
Alternative seed ortholog is Q55461 (6 bits away from this cluster)

Group of orthologs #161. Best score 155 bits
Score difference with first non-orthologous sequence - M.jannaschii:155 Synechocystis.sp.:155

Q57556              	100.00%		P72945              	100.00%
Bootstrap support for Q57556 as seed ortholog is 100%.
Bootstrap support for P72945 as seed ortholog is 100%.

Group of orthologs #162. Best score 154 bits
Score difference with first non-orthologous sequence - M.jannaschii:154 Synechocystis.sp.:154

Q57911              	100.00%		Q55187              	100.00%
Bootstrap support for Q57911 as seed ortholog is 100%.
Bootstrap support for Q55187 as seed ortholog is 100%.

Group of orthologs #163. Best score 154 bits
Score difference with first non-orthologous sequence - M.jannaschii:55 Synechocystis.sp.:154

Q58902              	100.00%		P74738              	100.00%
Bootstrap support for Q58902 as seed ortholog is 88%.
Bootstrap support for P74738 as seed ortholog is 100%.

Group of orthologs #164. Best score 153 bits
Score difference with first non-orthologous sequence - M.jannaschii:153 Synechocystis.sp.:153

Q59000              	100.00%		P52983              	100.00%
Bootstrap support for Q59000 as seed ortholog is 100%.
Bootstrap support for P52983 as seed ortholog is 100%.

Group of orthologs #165. Best score 152 bits
Score difference with first non-orthologous sequence - M.jannaschii:152 Synechocystis.sp.:24

Q58500              	100.00%		P73648              	100.00%
Bootstrap support for Q58500 as seed ortholog is 100%.
Bootstrap support for P73648 as seed ortholog is 61%.
Alternative seed ortholog is P74589 (24 bits away from this cluster)

Group of orthologs #166. Best score 151 bits
Score difference with first non-orthologous sequence - M.jannaschii:151 Synechocystis.sp.:151

Q60176              	100.00%		Q55383              	100.00%
Bootstrap support for Q60176 as seed ortholog is 100%.
Bootstrap support for Q55383 as seed ortholog is 100%.

Group of orthologs #167. Best score 150 bits
Score difference with first non-orthologous sequence - M.jannaschii:150 Synechocystis.sp.:150

Q58782              	100.00%		P72725              	100.00%
Bootstrap support for Q58782 as seed ortholog is 100%.
Bootstrap support for P72725 as seed ortholog is 100%.

Group of orthologs #168. Best score 149 bits
Score difference with first non-orthologous sequence - M.jannaschii:149 Synechocystis.sp.:149

Q58661              	100.00%		P74494              	100.00%
Bootstrap support for Q58661 as seed ortholog is 100%.
Bootstrap support for P74494 as seed ortholog is 100%.

Group of orthologs #169. Best score 149 bits
Score difference with first non-orthologous sequence - M.jannaschii:58 Synechocystis.sp.:51

Q58429              	100.00%		Q55816              	100.00%
Bootstrap support for Q58429 as seed ortholog is 96%.
Bootstrap support for Q55816 as seed ortholog is 97%.

Group of orthologs #170. Best score 148 bits
Score difference with first non-orthologous sequence - M.jannaschii:148 Synechocystis.sp.:7

Q58950              	100.00%		P52276              	100.00%
Bootstrap support for Q58950 as seed ortholog is 100%.
Bootstrap support for P52276 as seed ortholog is 54%.
Alternative seed ortholog is P73443 (7 bits away from this cluster)

Group of orthologs #171. Best score 147 bits
Score difference with first non-orthologous sequence - M.jannaschii:147 Synechocystis.sp.:147

Q58109              	100.00%		P48054              	100.00%
Bootstrap support for Q58109 as seed ortholog is 100%.
Bootstrap support for P48054 as seed ortholog is 100%.

Group of orthologs #172. Best score 147 bits
Score difference with first non-orthologous sequence - M.jannaschii:147 Synechocystis.sp.:147

Q58597              	100.00%		Q55806              	100.00%
Bootstrap support for Q58597 as seed ortholog is 100%.
Bootstrap support for Q55806 as seed ortholog is 100%.

Group of orthologs #173. Best score 146 bits
Score difference with first non-orthologous sequence - M.jannaschii:146 Synechocystis.sp.:146

Q58296              	100.00%		Q55368              	100.00%
Q58080              	9.96%		
Bootstrap support for Q58296 as seed ortholog is 100%.
Bootstrap support for Q55368 as seed ortholog is 100%.

Group of orthologs #174. Best score 146 bits
Score difference with first non-orthologous sequence - M.jannaschii:146 Synechocystis.sp.:34

Q58146              	100.00%		P73348              	100.00%
Bootstrap support for Q58146 as seed ortholog is 100%.
Bootstrap support for P73348 as seed ortholog is 88%.

Group of orthologs #175. Best score 145 bits
Score difference with first non-orthologous sequence - M.jannaschii:145 Synechocystis.sp.:145

Q58054              	100.00%		P72808              	100.00%
Bootstrap support for Q58054 as seed ortholog is 100%.
Bootstrap support for P72808 as seed ortholog is 100%.

Group of orthologs #176. Best score 144 bits
Score difference with first non-orthologous sequence - M.jannaschii:144 Synechocystis.sp.:144

Q58405              	100.00%		P22034              	100.00%
                    	       		Q05972              	58.00%
Bootstrap support for Q58405 as seed ortholog is 100%.
Bootstrap support for P22034 as seed ortholog is 100%.

Group of orthologs #177. Best score 144 bits
Score difference with first non-orthologous sequence - M.jannaschii:144 Synechocystis.sp.:144

Q58128              	100.00%		P74550              	100.00%
                    	       		Q6ZEU2              	7.70%
Bootstrap support for Q58128 as seed ortholog is 100%.
Bootstrap support for P74550 as seed ortholog is 100%.

Group of orthologs #178. Best score 143 bits
Score difference with first non-orthologous sequence - M.jannaschii:143 Synechocystis.sp.:143

Q60367              	100.00%		P0DJF8              	100.00%
Bootstrap support for Q60367 as seed ortholog is 100%.
Bootstrap support for P0DJF8 as seed ortholog is 100%.

Group of orthologs #179. Best score 143 bits
Score difference with first non-orthologous sequence - M.jannaschii:143 Synechocystis.sp.:143

Q57916              	100.00%		P74301              	100.00%
Bootstrap support for Q57916 as seed ortholog is 100%.
Bootstrap support for P74301 as seed ortholog is 100%.

Group of orthologs #180. Best score 142 bits
Score difference with first non-orthologous sequence - M.jannaschii:142 Synechocystis.sp.:142

Q58643              	100.00%		P74286              	100.00%
Bootstrap support for Q58643 as seed ortholog is 100%.
Bootstrap support for P74286 as seed ortholog is 100%.

Group of orthologs #181. Best score 142 bits
Score difference with first non-orthologous sequence - M.jannaschii:75 Synechocystis.sp.:40

Q60350              	100.00%		Q55791              	100.00%
Bootstrap support for Q60350 as seed ortholog is 99%.
Bootstrap support for Q55791 as seed ortholog is 91%.

Group of orthologs #182. Best score 141 bits
Score difference with first non-orthologous sequence - M.jannaschii:141 Synechocystis.sp.:141

Q57935              	100.00%		P27724              	100.00%
Q58433              	12.03%		
Bootstrap support for Q57935 as seed ortholog is 100%.
Bootstrap support for P27724 as seed ortholog is 100%.

Group of orthologs #183. Best score 141 bits
Score difference with first non-orthologous sequence - M.jannaschii:141 Synechocystis.sp.:141

Q57625              	100.00%		Q55141              	100.00%
Bootstrap support for Q57625 as seed ortholog is 100%.
Bootstrap support for Q55141 as seed ortholog is 100%.

Group of orthologs #184. Best score 141 bits
Score difference with first non-orthologous sequence - M.jannaschii:141 Synechocystis.sp.:141

Q57929              	100.00%		Q55805              	100.00%
Bootstrap support for Q57929 as seed ortholog is 100%.
Bootstrap support for Q55805 as seed ortholog is 100%.

Group of orthologs #185. Best score 139 bits
Score difference with first non-orthologous sequence - M.jannaschii:139 Synechocystis.sp.:139

Q59001              	100.00%		P74521              	100.00%
                    	       		P72623              	5.76%
Bootstrap support for Q59001 as seed ortholog is 100%.
Bootstrap support for P74521 as seed ortholog is 100%.

Group of orthologs #186. Best score 139 bits
Score difference with first non-orthologous sequence - M.jannaschii:139 Synechocystis.sp.:139

Q60342              	100.00%		P73423              	100.00%
Bootstrap support for Q60342 as seed ortholog is 100%.
Bootstrap support for P73423 as seed ortholog is 100%.

Group of orthologs #187. Best score 137 bits
Score difference with first non-orthologous sequence - M.jannaschii:137 Synechocystis.sp.:137

Q58414              	100.00%		P54691              	100.00%
Bootstrap support for Q58414 as seed ortholog is 100%.
Bootstrap support for P54691 as seed ortholog is 100%.

Group of orthologs #188. Best score 137 bits
Score difference with first non-orthologous sequence - M.jannaschii:137 Synechocystis.sp.:137

Q58761              	100.00%		Q55848              	100.00%
Bootstrap support for Q58761 as seed ortholog is 100%.
Bootstrap support for Q55848 as seed ortholog is 100%.

Group of orthologs #189. Best score 136 bits
Score difference with first non-orthologous sequence - M.jannaschii:74 Synechocystis.sp.:136

Q57967              	100.00%		Q55900              	100.00%
Q57633              	15.83%		
Bootstrap support for Q57967 as seed ortholog is 99%.
Bootstrap support for Q55900 as seed ortholog is 100%.

Group of orthologs #190. Best score 135 bits
Score difference with first non-orthologous sequence - M.jannaschii:135 Synechocystis.sp.:135

Q57955              	100.00%		P72702              	100.00%
Bootstrap support for Q57955 as seed ortholog is 100%.
Bootstrap support for P72702 as seed ortholog is 100%.

Group of orthologs #191. Best score 134 bits
Score difference with first non-orthologous sequence - M.jannaschii:65 Synechocystis.sp.:134

Q57690              	100.00%		Q55144              	100.00%
Bootstrap support for Q57690 as seed ortholog is 99%.
Bootstrap support for Q55144 as seed ortholog is 100%.

Group of orthologs #192. Best score 133 bits
Score difference with first non-orthologous sequence - M.jannaschii:133 Synechocystis.sp.:133

Q57865              	100.00%		P72642              	100.00%
Bootstrap support for Q57865 as seed ortholog is 100%.
Bootstrap support for P72642 as seed ortholog is 100%.

Group of orthologs #193. Best score 132 bits
Score difference with first non-orthologous sequence - M.jannaschii:132 Synechocystis.sp.:22

Q57757              	100.00%		P72703              	100.00%
Bootstrap support for Q57757 as seed ortholog is 100%.
Bootstrap support for P72703 as seed ortholog is 73%.
Alternative seed ortholog is P73270 (22 bits away from this cluster)

Group of orthologs #194. Best score 132 bits
Score difference with first non-orthologous sequence - M.jannaschii:132 Synechocystis.sp.:132

Q57880              	100.00%		Q55156              	100.00%
Bootstrap support for Q57880 as seed ortholog is 100%.
Bootstrap support for Q55156 as seed ortholog is 100%.

Group of orthologs #195. Best score 130 bits
Score difference with first non-orthologous sequence - M.jannaschii:45 Synechocystis.sp.:130

Q58591              	100.00%		P74021              	100.00%
Bootstrap support for Q58591 as seed ortholog is 94%.
Bootstrap support for P74021 as seed ortholog is 100%.

Group of orthologs #196. Best score 129 bits
Score difference with first non-orthologous sequence - M.jannaschii:129 Synechocystis.sp.:129

Q60381              	100.00%		Q55247              	100.00%
Q58740              	95.56%		
Bootstrap support for Q60381 as seed ortholog is 100%.
Bootstrap support for Q55247 as seed ortholog is 100%.

Group of orthologs #197. Best score 127 bits
Score difference with first non-orthologous sequence - M.jannaschii:127 Synechocystis.sp.:127

P54017              	100.00%		P73317              	100.00%
Bootstrap support for P54017 as seed ortholog is 100%.
Bootstrap support for P73317 as seed ortholog is 100%.

Group of orthologs #198. Best score 127 bits
Score difference with first non-orthologous sequence - M.jannaschii:72 Synechocystis.sp.:127

Q58030              	100.00%		P73715              	100.00%
Bootstrap support for Q58030 as seed ortholog is 99%.
Bootstrap support for P73715 as seed ortholog is 100%.

Group of orthologs #199. Best score 126 bits
Score difference with first non-orthologous sequence - M.jannaschii:17 Synechocystis.sp.:10

Q57669              	100.00%		P26527              	100.00%
Bootstrap support for Q57669 as seed ortholog is 63%.
Alternative seed ortholog is Q57670 (17 bits away from this cluster)
Bootstrap support for P26527 as seed ortholog is 44%.
Alternative seed ortholog is P27179 (10 bits away from this cluster)

Group of orthologs #200. Best score 126 bits
Score difference with first non-orthologous sequence - M.jannaschii:126 Synechocystis.sp.:126

Q58323              	100.00%		P73881              	100.00%
Bootstrap support for Q58323 as seed ortholog is 100%.
Bootstrap support for P73881 as seed ortholog is 100%.

Group of orthologs #201. Best score 126 bits
Score difference with first non-orthologous sequence - M.jannaschii:126 Synechocystis.sp.:126

Q58530              	100.00%		P74034              	100.00%
Bootstrap support for Q58530 as seed ortholog is 100%.
Bootstrap support for P74034 as seed ortholog is 100%.

Group of orthologs #202. Best score 126 bits
Score difference with first non-orthologous sequence - M.jannaschii:126 Synechocystis.sp.:126

Q58976              	100.00%		P74163              	100.00%
Bootstrap support for Q58976 as seed ortholog is 100%.
Bootstrap support for P74163 as seed ortholog is 100%.

Group of orthologs #203. Best score 126 bits
Score difference with first non-orthologous sequence - M.jannaschii:126 Synechocystis.sp.:126

Q58772              	100.00%		Q55778              	100.00%
Bootstrap support for Q58772 as seed ortholog is 100%.
Bootstrap support for Q55778 as seed ortholog is 100%.

Group of orthologs #204. Best score 125 bits
Score difference with first non-orthologous sequence - M.jannaschii:125 Synechocystis.sp.:26

Q57664              	100.00%		P72903              	100.00%
Q58455              	8.32%		
Bootstrap support for Q57664 as seed ortholog is 100%.
Bootstrap support for P72903 as seed ortholog is 73%.
Alternative seed ortholog is P72585 (26 bits away from this cluster)

Group of orthologs #205. Best score 124 bits
Score difference with first non-orthologous sequence - M.jannaschii:124 Synechocystis.sp.:124

Q58033              	100.00%		Q55498              	100.00%
Bootstrap support for Q58033 as seed ortholog is 100%.
Bootstrap support for Q55498 as seed ortholog is 100%.

Group of orthologs #206. Best score 124 bits
Score difference with first non-orthologous sequence - M.jannaschii:72 Synechocystis.sp.:75

Q58234              	100.00%		Q55369              	100.00%
Bootstrap support for Q58234 as seed ortholog is 97%.
Bootstrap support for Q55369 as seed ortholog is 99%.

Group of orthologs #207. Best score 124 bits
Score difference with first non-orthologous sequence - M.jannaschii:124 Synechocystis.sp.:124

Q58328              	100.00%		Q55508              	100.00%
Bootstrap support for Q58328 as seed ortholog is 100%.
Bootstrap support for Q55508 as seed ortholog is 100%.

Group of orthologs #208. Best score 123 bits
Score difference with first non-orthologous sequence - M.jannaschii:123 Synechocystis.sp.:123

Q58067              	100.00%		Q55682              	100.00%
Bootstrap support for Q58067 as seed ortholog is 100%.
Bootstrap support for Q55682 as seed ortholog is 100%.

Group of orthologs #209. Best score 122 bits
Score difference with first non-orthologous sequence - M.jannaschii:48 Synechocystis.sp.:28

Q59056              	100.00%		P73758              	100.00%
                    	       		P74317              	19.54%
Bootstrap support for Q59056 as seed ortholog is 53%.
Alternative seed ortholog is Q58129 (48 bits away from this cluster)
Bootstrap support for P73758 as seed ortholog is 70%.
Alternative seed ortholog is Q55463 (28 bits away from this cluster)

Group of orthologs #210. Best score 122 bits
Score difference with first non-orthologous sequence - M.jannaschii:122 Synechocystis.sp.:122

Q58435              	100.00%		P72666              	100.00%
Bootstrap support for Q58435 as seed ortholog is 100%.
Bootstrap support for P72666 as seed ortholog is 100%.

Group of orthologs #211. Best score 122 bits
Score difference with first non-orthologous sequence - M.jannaschii:122 Synechocystis.sp.:122

Q58635              	100.00%		P73942              	100.00%
Bootstrap support for Q58635 as seed ortholog is 100%.
Bootstrap support for P73942 as seed ortholog is 100%.

Group of orthologs #212. Best score 121 bits
Score difference with first non-orthologous sequence - M.jannaschii:121 Synechocystis.sp.:121

Q58439              	100.00%		Q55481              	100.00%
                    	       		Q55968              	38.47%
Bootstrap support for Q58439 as seed ortholog is 100%.
Bootstrap support for Q55481 as seed ortholog is 100%.

Group of orthologs #213. Best score 121 bits
Score difference with first non-orthologous sequence - M.jannaschii:121 Synechocystis.sp.:121

Q57566              	100.00%		P72743              	100.00%
Bootstrap support for Q57566 as seed ortholog is 100%.
Bootstrap support for P72743 as seed ortholog is 100%.

Group of orthologs #214. Best score 121 bits
Score difference with first non-orthologous sequence - M.jannaschii:121 Synechocystis.sp.:121

Q58348              	100.00%		P74369              	100.00%
Bootstrap support for Q58348 as seed ortholog is 100%.
Bootstrap support for P74369 as seed ortholog is 100%.

Group of orthologs #215. Best score 119 bits
Score difference with first non-orthologous sequence - M.jannaschii:119 Synechocystis.sp.:119

Q57557              	100.00%		P73119              	100.00%
Bootstrap support for Q57557 as seed ortholog is 100%.
Bootstrap support for P73119 as seed ortholog is 100%.

Group of orthologs #216. Best score 119 bits
Score difference with first non-orthologous sequence - M.jannaschii:119 Synechocystis.sp.:119

Q57575              	100.00%		Q55610              	100.00%
Bootstrap support for Q57575 as seed ortholog is 100%.
Bootstrap support for Q55610 as seed ortholog is 100%.

Group of orthologs #217. Best score 119 bits
Score difference with first non-orthologous sequence - M.jannaschii:119 Synechocystis.sp.:119

Q57837              	100.00%		Q55518              	100.00%
Bootstrap support for Q57837 as seed ortholog is 100%.
Bootstrap support for Q55518 as seed ortholog is 100%.

Group of orthologs #218. Best score 118 bits
Score difference with first non-orthologous sequence - M.jannaschii:118 Synechocystis.sp.:118

Q57979              	100.00%		P74709              	100.00%
Bootstrap support for Q57979 as seed ortholog is 100%.
Bootstrap support for P74709 as seed ortholog is 100%.

Group of orthologs #219. Best score 116 bits
Score difference with first non-orthologous sequence - M.jannaschii:116 Synechocystis.sp.:67

Q57952              	100.00%		Q55087              	100.00%
Q58915              	11.23%		
Bootstrap support for Q57952 as seed ortholog is 100%.
Bootstrap support for Q55087 as seed ortholog is 91%.

Group of orthologs #220. Best score 116 bits
Score difference with first non-orthologous sequence - M.jannaschii:116 Synechocystis.sp.:116

Q58533              	100.00%		P72861              	100.00%
Bootstrap support for Q58533 as seed ortholog is 100%.
Bootstrap support for P72861 as seed ortholog is 100%.

Group of orthologs #221. Best score 116 bits
Score difference with first non-orthologous sequence - M.jannaschii:116 Synechocystis.sp.:116

Q58710              	100.00%		P74475              	100.00%
Bootstrap support for Q58710 as seed ortholog is 100%.
Bootstrap support for P74475 as seed ortholog is 100%.

Group of orthologs #222. Best score 115 bits
Score difference with first non-orthologous sequence - M.jannaschii:115 Synechocystis.sp.:115

Q57594              	100.00%		Q6YRQ7              	100.00%
Bootstrap support for Q57594 as seed ortholog is 100%.
Bootstrap support for Q6YRQ7 as seed ortholog is 100%.

Group of orthologs #223. Best score 114 bits
Score difference with first non-orthologous sequence - M.jannaschii:114 Synechocystis.sp.:114

Q57936              	100.00%		P17062              	100.00%
Q58758              	24.61%		P19050              	52.82%
Bootstrap support for Q57936 as seed ortholog is 100%.
Bootstrap support for P17062 as seed ortholog is 100%.

Group of orthologs #224. Best score 114 bits
Score difference with first non-orthologous sequence - M.jannaschii:67 Synechocystis.sp.:114

Q58509              	100.00%		Q55574              	100.00%
Bootstrap support for Q58509 as seed ortholog is 99%.
Bootstrap support for Q55574 as seed ortholog is 100%.

Group of orthologs #225. Best score 113 bits
Score difference with first non-orthologous sequence - M.jannaschii:113 Synechocystis.sp.:113

Q58240              	100.00%		P73846              	100.00%
Bootstrap support for Q58240 as seed ortholog is 100%.
Bootstrap support for P73846 as seed ortholog is 100%.

Group of orthologs #226. Best score 113 bits
Score difference with first non-orthologous sequence - M.jannaschii:113 Synechocystis.sp.:113

Q58742              	100.00%		Q55468              	100.00%
Bootstrap support for Q58742 as seed ortholog is 100%.
Bootstrap support for Q55468 as seed ortholog is 100%.

Group of orthologs #227. Best score 111 bits
Score difference with first non-orthologous sequence - M.jannaschii:111 Synechocystis.sp.:8

Q58705              	100.00%		P72714              	100.00%
Bootstrap support for Q58705 as seed ortholog is 100%.
Bootstrap support for P72714 as seed ortholog is 32%.
Alternative seed ortholog is P73394 (8 bits away from this cluster)

Group of orthologs #228. Best score 110 bits
Score difference with first non-orthologous sequence - M.jannaschii:110 Synechocystis.sp.:110

Q58615              	100.00%		Q6ZE86              	100.00%
Q58926              	23.91%		
Bootstrap support for Q58615 as seed ortholog is 100%.
Bootstrap support for Q6ZE86 as seed ortholog is 100%.

Group of orthologs #229. Best score 109 bits
Score difference with first non-orthologous sequence - M.jannaschii:109 Synechocystis.sp.:25

Q57748              	100.00%		P73123              	100.00%
                    	       		Q55459              	8.42%
Bootstrap support for Q57748 as seed ortholog is 100%.
Bootstrap support for P73123 as seed ortholog is 82%.

Group of orthologs #230. Best score 109 bits
Score difference with first non-orthologous sequence - M.jannaschii:109 Synechocystis.sp.:109

Q58955              	100.00%		P73784              	100.00%
Bootstrap support for Q58955 as seed ortholog is 100%.
Bootstrap support for P73784 as seed ortholog is 100%.

Group of orthologs #231. Best score 108 bits
Score difference with first non-orthologous sequence - M.jannaschii:108 Synechocystis.sp.:43

Q58505              	100.00%		Q55608              	100.00%
Bootstrap support for Q58505 as seed ortholog is 100%.
Bootstrap support for Q55608 as seed ortholog is 93%.

Group of orthologs #232. Best score 107 bits
Score difference with first non-orthologous sequence - M.jannaschii:107 Synechocystis.sp.:107

Q58763              	100.00%		Q01895              	100.00%
                    	       		P74547              	15.71%
Bootstrap support for Q58763 as seed ortholog is 100%.
Bootstrap support for Q01895 as seed ortholog is 100%.

Group of orthologs #233. Best score 106 bits
Score difference with first non-orthologous sequence - M.jannaschii:106 Synechocystis.sp.:106

Q58725              	100.00%		P53581              	100.00%
                    	       		P53579              	18.87%
                    	       		P53580              	14.98%
Bootstrap support for Q58725 as seed ortholog is 100%.
Bootstrap support for P53581 as seed ortholog is 100%.

Group of orthologs #234. Best score 106 bits
Score difference with first non-orthologous sequence - M.jannaschii:106 Synechocystis.sp.:49

Q57684              	100.00%		P73501              	100.00%
Bootstrap support for Q57684 as seed ortholog is 100%.
Bootstrap support for P73501 as seed ortholog is 89%.

Group of orthologs #235. Best score 106 bits
Score difference with first non-orthologous sequence - M.jannaschii:106 Synechocystis.sp.:106

Q58708              	100.00%		P74557              	100.00%
Bootstrap support for Q58708 as seed ortholog is 100%.
Bootstrap support for P74557 as seed ortholog is 100%.

Group of orthologs #236. Best score 106 bits
Score difference with first non-orthologous sequence - M.jannaschii:106 Synechocystis.sp.:106

Q57655              	100.00%		Q6ZEV0              	100.00%
Bootstrap support for Q57655 as seed ortholog is 100%.
Bootstrap support for Q6ZEV0 as seed ortholog is 100%.

Group of orthologs #237. Best score 104 bits
Score difference with first non-orthologous sequence - M.jannaschii:104 Synechocystis.sp.:104

Q57634              	100.00%		Q55717              	100.00%
Q58543              	36.63%		
Bootstrap support for Q57634 as seed ortholog is 100%.
Bootstrap support for Q55717 as seed ortholog is 100%.

Group of orthologs #238. Best score 103 bits
Score difference with first non-orthologous sequence - M.jannaschii:103 Synechocystis.sp.:103

Q58181              	100.00%		P73644              	100.00%
Bootstrap support for Q58181 as seed ortholog is 100%.
Bootstrap support for P73644 as seed ortholog is 100%.

Group of orthologs #239. Best score 103 bits
Score difference with first non-orthologous sequence - M.jannaschii:103 Synechocystis.sp.:39

Q58340              	100.00%		P74304              	100.00%
Bootstrap support for Q58340 as seed ortholog is 100%.
Bootstrap support for P74304 as seed ortholog is 92%.

Group of orthologs #240. Best score 102 bits
Score difference with first non-orthologous sequence - M.jannaschii:102 Synechocystis.sp.:102

Q57658              	100.00%		Q55512              	100.00%
Bootstrap support for Q57658 as seed ortholog is 100%.
Bootstrap support for Q55512 as seed ortholog is 100%.

Group of orthologs #241. Best score 102 bits
Score difference with first non-orthologous sequence - M.jannaschii:102 Synechocystis.sp.:102

Q58871              	100.00%		Q55896              	100.00%
Bootstrap support for Q58871 as seed ortholog is 100%.
Bootstrap support for Q55896 as seed ortholog is 100%.

Group of orthologs #242. Best score 101 bits
Score difference with first non-orthologous sequence - M.jannaschii:101 Synechocystis.sp.:101

Q57983              	100.00%		Q59995              	100.00%
Q58600              	32.39%		
Bootstrap support for Q57983 as seed ortholog is 100%.
Bootstrap support for Q59995 as seed ortholog is 100%.

Group of orthologs #243. Best score 101 bits
Score difference with first non-orthologous sequence - M.jannaschii:101 Synechocystis.sp.:12

Q58549              	100.00%		Q55381              	100.00%
Bootstrap support for Q58549 as seed ortholog is 100%.
Bootstrap support for Q55381 as seed ortholog is 55%.
Alternative seed ortholog is P73258 (12 bits away from this cluster)

Group of orthologs #244. Best score 101 bits
Score difference with first non-orthologous sequence - M.jannaschii:101 Synechocystis.sp.:101

Q58601              	100.00%		Q55503              	100.00%
Bootstrap support for Q58601 as seed ortholog is 100%.
Bootstrap support for Q55503 as seed ortholog is 100%.

Group of orthologs #245. Best score 100 bits
Score difference with first non-orthologous sequence - M.jannaschii:100 Synechocystis.sp.:14

Q58916              	100.00%		Q55388              	100.00%
Q60362              	40.85%		
Bootstrap support for Q58916 as seed ortholog is 100%.
Bootstrap support for Q55388 as seed ortholog is 72%.
Alternative seed ortholog is P73863 (14 bits away from this cluster)

Group of orthologs #246. Best score 99 bits
Score difference with first non-orthologous sequence - M.jannaschii:99 Synechocystis.sp.:99

Q58216              	100.00%		P74468              	100.00%
Bootstrap support for Q58216 as seed ortholog is 100%.
Bootstrap support for P74468 as seed ortholog is 100%.

Group of orthologs #247. Best score 97 bits
Score difference with first non-orthologous sequence - M.jannaschii:97 Synechocystis.sp.:97

Q58343              	100.00%		P73555              	100.00%
Bootstrap support for Q58343 as seed ortholog is 100%.
Bootstrap support for P73555 as seed ortholog is 100%.

Group of orthologs #248. Best score 97 bits
Score difference with first non-orthologous sequence - M.jannaschii:97 Synechocystis.sp.:97

Q58728              	100.00%		P73886              	100.00%
Bootstrap support for Q58728 as seed ortholog is 100%.
Bootstrap support for P73886 as seed ortholog is 100%.

Group of orthologs #249. Best score 96 bits
Score difference with first non-orthologous sequence - M.jannaschii:96 Synechocystis.sp.:96

P54030              	100.00%		P36237              	100.00%
Bootstrap support for P54030 as seed ortholog is 100%.
Bootstrap support for P36237 as seed ortholog is 100%.

Group of orthologs #250. Best score 94 bits
Score difference with first non-orthologous sequence - M.jannaschii:94 Synechocystis.sp.:94

P54045              	100.00%		P73304              	100.00%
Bootstrap support for P54045 as seed ortholog is 100%.
Bootstrap support for P73304 as seed ortholog is 100%.

Group of orthologs #251. Best score 94 bits
Score difference with first non-orthologous sequence - M.jannaschii:94 Synechocystis.sp.:94

Q58085              	100.00%		Q55158              	100.00%
Bootstrap support for Q58085 as seed ortholog is 100%.
Bootstrap support for Q55158 as seed ortholog is 100%.

Group of orthologs #252. Best score 93 bits
Score difference with first non-orthologous sequence - M.jannaschii:93 Synechocystis.sp.:93

Q60343              	100.00%		P72943              	100.00%
Bootstrap support for Q60343 as seed ortholog is 100%.
Bootstrap support for P72943 as seed ortholog is 100%.

Group of orthologs #253. Best score 92 bits
Score difference with first non-orthologous sequence - M.jannaschii:92 Synechocystis.sp.:92

Q60341              	100.00%		P74473              	100.00%
Q58135              	14.78%		
Q58744              	8.30%		
Bootstrap support for Q60341 as seed ortholog is 100%.
Bootstrap support for P74473 as seed ortholog is 100%.

Group of orthologs #254. Best score 92 bits
Score difference with first non-orthologous sequence - M.jannaschii:92 Synechocystis.sp.:92

Q57891              	100.00%		P74068              	100.00%
Bootstrap support for Q57891 as seed ortholog is 100%.
Bootstrap support for P74068 as seed ortholog is 100%.

Group of orthologs #255. Best score 91 bits
Score difference with first non-orthologous sequence - M.jannaschii:91 Synechocystis.sp.:91

Q60358              	100.00%		P73043              	100.00%
Bootstrap support for Q60358 as seed ortholog is 100%.
Bootstrap support for P73043 as seed ortholog is 100%.

Group of orthologs #256. Best score 90 bits
Score difference with first non-orthologous sequence - M.jannaschii:90 Synechocystis.sp.:90

P54034              	100.00%		P73314              	100.00%
Bootstrap support for P54034 as seed ortholog is 100%.
Bootstrap support for P73314 as seed ortholog is 100%.

Group of orthologs #257. Best score 90 bits
Score difference with first non-orthologous sequence - M.jannaschii:90 Synechocystis.sp.:90

Q57679              	100.00%		P74432              	100.00%
Bootstrap support for Q57679 as seed ortholog is 100%.
Bootstrap support for P74432 as seed ortholog is 100%.

Group of orthologs #258. Best score 89 bits
Score difference with first non-orthologous sequence - M.jannaschii:89 Synechocystis.sp.:11

Q58931              	100.00%		P72740              	100.00%
Bootstrap support for Q58931 as seed ortholog is 100%.
Bootstrap support for P72740 as seed ortholog is 72%.
Alternative seed ortholog is P74746 (11 bits away from this cluster)

Group of orthologs #259. Best score 89 bits
Score difference with first non-orthologous sequence - M.jannaschii:89 Synechocystis.sp.:37

Q58665              	100.00%		P73350              	100.00%
Bootstrap support for Q58665 as seed ortholog is 100%.
Bootstrap support for P73350 as seed ortholog is 72%.
Alternative seed ortholog is P73351 (37 bits away from this cluster)

Group of orthologs #260. Best score 89 bits
Score difference with first non-orthologous sequence - M.jannaschii:25 Synechocystis.sp.:89

Q58977              	100.00%		P73335              	100.00%
Bootstrap support for Q58977 as seed ortholog is 77%.
Bootstrap support for P73335 as seed ortholog is 100%.

Group of orthologs #261. Best score 89 bits
Score difference with first non-orthologous sequence - M.jannaschii:89 Synechocystis.sp.:14

Q58666              	100.00%		P74455              	100.00%
Bootstrap support for Q58666 as seed ortholog is 100%.
Bootstrap support for P74455 as seed ortholog is 82%.

Group of orthologs #262. Best score 88 bits
Score difference with first non-orthologous sequence - M.jannaschii:88 Synechocystis.sp.:45

Q60283              	100.00%		P72976              	100.00%
Bootstrap support for Q60283 as seed ortholog is 100%.
Bootstrap support for P72976 as seed ortholog is 87%.

Group of orthologs #263. Best score 87 bits
Score difference with first non-orthologous sequence - M.jannaschii:26 Synechocystis.sp.:39

Q57711              	100.00%		P74084              	100.00%
Bootstrap support for Q57711 as seed ortholog is 82%.
Bootstrap support for P74084 as seed ortholog is 86%.

Group of orthologs #264. Best score 87 bits
Score difference with first non-orthologous sequence - M.jannaschii:87 Synechocystis.sp.:35

Q60369              	100.00%		P72724              	100.00%
Bootstrap support for Q60369 as seed ortholog is 100%.
Bootstrap support for P72724 as seed ortholog is 90%.

Group of orthologs #265. Best score 87 bits
Score difference with first non-orthologous sequence - M.jannaschii:87 Synechocystis.sp.:87

Q58504              	100.00%		P73646              	100.00%
Bootstrap support for Q58504 as seed ortholog is 100%.
Bootstrap support for P73646 as seed ortholog is 100%.

Group of orthologs #266. Best score 87 bits
Score difference with first non-orthologous sequence - M.jannaschii:87 Synechocystis.sp.:87

Q58719              	100.00%		Q55661              	100.00%
Bootstrap support for Q58719 as seed ortholog is 100%.
Bootstrap support for Q55661 as seed ortholog is 100%.

Group of orthologs #267. Best score 84 bits
Score difference with first non-orthologous sequence - M.jannaschii:84 Synechocystis.sp.:84

P54021              	100.00%		P73298              	100.00%
Bootstrap support for P54021 as seed ortholog is 100%.
Bootstrap support for P73298 as seed ortholog is 100%.

Group of orthologs #268. Best score 84 bits
Score difference with first non-orthologous sequence - M.jannaschii:84 Synechocystis.sp.:84

Q58415              	100.00%		P72686              	100.00%
Bootstrap support for Q58415 as seed ortholog is 100%.
Bootstrap support for P72686 as seed ortholog is 100%.

Group of orthologs #269. Best score 84 bits
Score difference with first non-orthologous sequence - M.jannaschii:84 Synechocystis.sp.:84

Q57612              	100.00%		P74696              	100.00%
Bootstrap support for Q57612 as seed ortholog is 100%.
Bootstrap support for P74696 as seed ortholog is 100%.

Group of orthologs #270. Best score 82 bits
Score difference with first non-orthologous sequence - M.jannaschii:82 Synechocystis.sp.:82

P54040              	100.00%		P73308              	100.00%
Bootstrap support for P54040 as seed ortholog is 100%.
Bootstrap support for P73308 as seed ortholog is 100%.

Group of orthologs #271. Best score 81 bits
Score difference with first non-orthologous sequence - M.jannaschii:81 Synechocystis.sp.:81

Q57753              	100.00%		P73745              	100.00%
Bootstrap support for Q57753 as seed ortholog is 100%.
Bootstrap support for P73745 as seed ortholog is 100%.

Group of orthologs #272. Best score 80 bits
Score difference with first non-orthologous sequence - M.jannaschii:80 Synechocystis.sp.:80

Q57626              	100.00%		Q55470              	100.00%
Q58633              	28.39%		
Q60355              	20.44%		
Bootstrap support for Q57626 as seed ortholog is 100%.
Bootstrap support for Q55470 as seed ortholog is 100%.

Group of orthologs #273. Best score 78 bits
Score difference with first non-orthologous sequence - M.jannaschii:7 Synechocystis.sp.:21

Q58065              	100.00%		P73059              	100.00%
Bootstrap support for Q58065 as seed ortholog is 54%.
Alternative seed ortholog is Q58053 (7 bits away from this cluster)
Bootstrap support for P73059 as seed ortholog is 69%.
Alternative seed ortholog is P74614 (21 bits away from this cluster)

Group of orthologs #274. Best score 77 bits
Score difference with first non-orthologous sequence - M.jannaschii:77 Synechocystis.sp.:77

Q58491              	100.00%		Q55742              	100.00%
Q58964              	6.94%		
Bootstrap support for Q58491 as seed ortholog is 100%.
Bootstrap support for Q55742 as seed ortholog is 100%.

Group of orthologs #275. Best score 77 bits
Score difference with first non-orthologous sequence - M.jannaschii:77 Synechocystis.sp.:5

Q57727              	100.00%		Q55145              	100.00%
Bootstrap support for Q57727 as seed ortholog is 100%.
Bootstrap support for Q55145 as seed ortholog is 57%.
Alternative seed ortholog is P73726 (5 bits away from this cluster)

Group of orthologs #276. Best score 77 bits
Score difference with first non-orthologous sequence - M.jannaschii:77 Synechocystis.sp.:77

Q58481              	100.00%		P74125              	100.00%
Bootstrap support for Q58481 as seed ortholog is 100%.
Bootstrap support for P74125 as seed ortholog is 100%.

Group of orthologs #277. Best score 77 bits
Score difference with first non-orthologous sequence - M.jannaschii:77 Synechocystis.sp.:77

Q57741              	100.00%		Q55593              	100.00%
Bootstrap support for Q57741 as seed ortholog is 100%.
Bootstrap support for Q55593 as seed ortholog is 100%.

Group of orthologs #278. Best score 77 bits
Score difference with first non-orthologous sequence - M.jannaschii:77 Synechocystis.sp.:77

Q57823              	100.00%		Q6ZEC7              	100.00%
Bootstrap support for Q57823 as seed ortholog is 100%.
Bootstrap support for Q6ZEC7 as seed ortholog is 100%.

Group of orthologs #279. Best score 76 bits
Score difference with first non-orthologous sequence - M.jannaschii:76 Synechocystis.sp.:4

Q57589              	100.00%		Q6ZEW2              	100.00%
Q58613              	94.48%		P72996              	30.61%
Q57591              	38.65%		
Q57876              	21.47%		
Q58775              	20.25%		
Bootstrap support for Q57589 as seed ortholog is 100%.
Bootstrap support for Q6ZEW2 as seed ortholog is 59%.
Alternative seed ortholog is P73969 (4 bits away from this cluster)

Group of orthologs #280. Best score 76 bits
Score difference with first non-orthologous sequence - M.jannaschii:76 Synechocystis.sp.:76

Q58695              	100.00%		Q55849              	100.00%
Bootstrap support for Q58695 as seed ortholog is 100%.
Bootstrap support for Q55849 as seed ortholog is 100%.

Group of orthologs #281. Best score 75 bits
Score difference with first non-orthologous sequence - M.jannaschii:75 Synechocystis.sp.:75

P54042              	100.00%		P73306              	100.00%
Bootstrap support for P54042 as seed ortholog is 100%.
Bootstrap support for P73306 as seed ortholog is 100%.

Group of orthologs #282. Best score 74 bits
Score difference with first non-orthologous sequence - M.jannaschii:74 Synechocystis.sp.:74

Q58673              	100.00%		P74207              	100.00%
Q58667              	32.71%		
Bootstrap support for Q58673 as seed ortholog is 100%.
Bootstrap support for P74207 as seed ortholog is 100%.

Group of orthologs #283. Best score 74 bits
Score difference with first non-orthologous sequence - M.jannaschii:74 Synechocystis.sp.:74

Q58824              	100.00%		Q6YRT8              	100.00%
Q60270              	24.54%		
Bootstrap support for Q58824 as seed ortholog is 100%.
Bootstrap support for Q6YRT8 as seed ortholog is 100%.

Group of orthologs #284. Best score 74 bits
Score difference with first non-orthologous sequence - M.jannaschii:74 Synechocystis.sp.:74

Q58276              	100.00%		P73481              	100.00%
Bootstrap support for Q58276 as seed ortholog is 100%.
Bootstrap support for P73481 as seed ortholog is 100%.

Group of orthologs #285. Best score 74 bits
Score difference with first non-orthologous sequence - M.jannaschii:74 Synechocystis.sp.:74

Q58880              	100.00%		P73949              	100.00%
Bootstrap support for Q58880 as seed ortholog is 100%.
Bootstrap support for P73949 as seed ortholog is 100%.

Group of orthologs #286. Best score 73 bits
Score difference with first non-orthologous sequence - M.jannaschii:73 Synechocystis.sp.:73

Q58540              	100.00%		P73849              	100.00%
Bootstrap support for Q58540 as seed ortholog is 100%.
Bootstrap support for P73849 as seed ortholog is 100%.

Group of orthologs #287. Best score 73 bits
Score difference with first non-orthologous sequence - M.jannaschii:73 Synechocystis.sp.:8

Q58070              	100.00%		Q55989              	100.00%
Bootstrap support for Q58070 as seed ortholog is 100%.
Bootstrap support for Q55989 as seed ortholog is 56%.
Alternative seed ortholog is P74782 (8 bits away from this cluster)

Group of orthologs #288. Best score 73 bits
Score difference with first non-orthologous sequence - M.jannaschii:73 Synechocystis.sp.:73

Q60291              	100.00%		Q6ZEV7              	100.00%
Bootstrap support for Q60291 as seed ortholog is 100%.
Bootstrap support for Q6ZEV7 as seed ortholog is 100%.

Group of orthologs #289. Best score 72 bits
Score difference with first non-orthologous sequence - M.jannaschii:72 Synechocystis.sp.:10

Q57951              	100.00%		P74148              	100.00%
Q57997              	7.31%		
Bootstrap support for Q57951 as seed ortholog is 100%.
Bootstrap support for P74148 as seed ortholog is 69%.
Alternative seed ortholog is P72745 (10 bits away from this cluster)

Group of orthologs #290. Best score 72 bits
Score difference with first non-orthologous sequence - M.jannaschii:72 Synechocystis.sp.:72

Q57940              	100.00%		P26522              	100.00%
Bootstrap support for Q57940 as seed ortholog is 100%.
Bootstrap support for P26522 as seed ortholog is 100%.

Group of orthologs #291. Best score 72 bits
Score difference with first non-orthologous sequence - M.jannaschii:72 Synechocystis.sp.:72

Q57563              	100.00%		P73811              	100.00%
Bootstrap support for Q57563 as seed ortholog is 100%.
Bootstrap support for P73811 as seed ortholog is 100%.

Group of orthologs #292. Best score 72 bits
Score difference with first non-orthologous sequence - M.jannaschii:3 Synechocystis.sp.:72

Q58086              	100.00%		P74635              	100.00%
Bootstrap support for Q58086 as seed ortholog is 55%.
Alternative seed ortholog is Q57898 (3 bits away from this cluster)
Bootstrap support for P74635 as seed ortholog is 100%.

Group of orthologs #293. Best score 71 bits
Score difference with first non-orthologous sequence - M.jannaschii:71 Synechocystis.sp.:71

Q58350              	100.00%		P74321              	100.00%
O06917              	16.37%		
Q58741              	13.17%		
Bootstrap support for Q58350 as seed ortholog is 100%.
Bootstrap support for P74321 as seed ortholog is 100%.

Group of orthologs #294. Best score 71 bits
Score difference with first non-orthologous sequence - M.jannaschii:71 Synechocystis.sp.:71

Q60337              	100.00%		P72787              	100.00%
Bootstrap support for Q60337 as seed ortholog is 100%.
Bootstrap support for P72787 as seed ortholog is 100%.

Group of orthologs #295. Best score 71 bits
Score difference with first non-orthologous sequence - M.jannaschii:71 Synechocystis.sp.:71

Q58656              	100.00%		P74457              	100.00%
Bootstrap support for Q58656 as seed ortholog is 100%.
Bootstrap support for P74457 as seed ortholog is 100%.

Group of orthologs #296. Best score 71 bits
Score difference with first non-orthologous sequence - M.jannaschii:71 Synechocystis.sp.:71

Q58981              	100.00%		P74217              	100.00%
Bootstrap support for Q58981 as seed ortholog is 100%.
Bootstrap support for P74217 as seed ortholog is 100%.

Group of orthologs #297. Best score 71 bits
Score difference with first non-orthologous sequence - M.jannaschii:71 Synechocystis.sp.:71

Q58513              	100.00%		Q55986              	100.00%
Bootstrap support for Q58513 as seed ortholog is 100%.
Bootstrap support for Q55986 as seed ortholog is 100%.

Group of orthologs #298. Best score 70 bits
Score difference with first non-orthologous sequence - M.jannaschii:70 Synechocystis.sp.:70

P54050              	100.00%		P36236              	100.00%
Bootstrap support for P54050 as seed ortholog is 100%.
Bootstrap support for P36236 as seed ortholog is 100%.

Group of orthologs #299. Best score 69 bits
Score difference with first non-orthologous sequence - M.jannaschii:69 Synechocystis.sp.:69

Q57972              	100.00%		P72711              	100.00%
Bootstrap support for Q57972 as seed ortholog is 100%.
Bootstrap support for P72711 as seed ortholog is 100%.

Group of orthologs #300. Best score 69 bits
Score difference with first non-orthologous sequence - M.jannaschii:69 Synechocystis.sp.:69

P54037              	100.00%		P73310              	100.00%
Bootstrap support for P54037 as seed ortholog is 100%.
Bootstrap support for P73310 as seed ortholog is 100%.

Group of orthologs #301. Best score 69 bits
Score difference with first non-orthologous sequence - M.jannaschii:69 Synechocystis.sp.:69

Q57834              	100.00%		P73141              	100.00%
Bootstrap support for Q57834 as seed ortholog is 100%.
Bootstrap support for P73141 as seed ortholog is 100%.

Group of orthologs #302. Best score 67 bits
Score difference with first non-orthologous sequence - M.jannaschii:67 Synechocystis.sp.:67

Q58803              	100.00%		P72931              	100.00%
Bootstrap support for Q58803 as seed ortholog is 100%.
Bootstrap support for P72931 as seed ortholog is 100%.

Group of orthologs #303. Best score 67 bits
Score difference with first non-orthologous sequence - M.jannaschii:67 Synechocystis.sp.:67

Q58650              	100.00%		Q55611              	100.00%
Bootstrap support for Q58650 as seed ortholog is 100%.
Bootstrap support for Q55611 as seed ortholog is 100%.

Group of orthologs #304. Best score 67 bits
Score difference with first non-orthologous sequence - M.jannaschii:67 Synechocystis.sp.:67

Q60175              	100.00%		P77964              	100.00%
Bootstrap support for Q60175 as seed ortholog is 100%.
Bootstrap support for P77964 as seed ortholog is 100%.

Group of orthologs #305. Best score 66 bits
Score difference with first non-orthologous sequence - M.jannaschii:66 Synechocystis.sp.:9

Q58882              	100.00%		Q55914              	100.00%
Q58275              	5.08%		P42349              	7.44%
Bootstrap support for Q58882 as seed ortholog is 100%.
Bootstrap support for Q55914 as seed ortholog is 56%.
Alternative seed ortholog is Q55524 (9 bits away from this cluster)

Group of orthologs #306. Best score 65 bits
Score difference with first non-orthologous sequence - M.jannaschii:65 Synechocystis.sp.:65

Q58578              	100.00%		P74204              	100.00%
                    	       		Q55851              	31.24%
                    	       		Q55147              	21.04%
                    	       		Q55153              	18.21%
Bootstrap support for Q58578 as seed ortholog is 100%.
Bootstrap support for P74204 as seed ortholog is 100%.

Group of orthologs #307. Best score 65 bits
Score difference with first non-orthologous sequence - M.jannaschii:65 Synechocystis.sp.:65

Q58122              	100.00%		P74246              	100.00%
Bootstrap support for Q58122 as seed ortholog is 100%.
Bootstrap support for P74246 as seed ortholog is 100%.

Group of orthologs #308. Best score 64 bits
Score difference with first non-orthologous sequence - M.jannaschii:64 Synechocystis.sp.:64

Q58810              	100.00%		P73655              	100.00%
Bootstrap support for Q58810 as seed ortholog is 100%.
Bootstrap support for P73655 as seed ortholog is 100%.

Group of orthologs #309. Best score 64 bits
Score difference with first non-orthologous sequence - M.jannaschii:64 Synechocystis.sp.:64

Q58944              	100.00%		P73825              	100.00%
Bootstrap support for Q58944 as seed ortholog is 100%.
Bootstrap support for P73825 as seed ortholog is 100%.

Group of orthologs #310. Best score 63 bits
Score difference with first non-orthologous sequence - M.jannaschii:63 Synechocystis.sp.:63

Q58452              	100.00%		P72699              	100.00%
Bootstrap support for Q58452 as seed ortholog is 100%.
Bootstrap support for P72699 as seed ortholog is 100%.

Group of orthologs #311. Best score 62 bits
Score difference with first non-orthologous sequence - M.jannaschii:62 Synechocystis.sp.:62

Q58508              	100.00%		P74296              	100.00%
Bootstrap support for Q58508 as seed ortholog is 100%.
Bootstrap support for P74296 as seed ortholog is 100%.

Group of orthologs #312. Best score 62 bits
Score difference with first non-orthologous sequence - M.jannaschii:62 Synechocystis.sp.:62

Q57902              	100.00%		Q55397              	100.00%
Bootstrap support for Q57902 as seed ortholog is 100%.
Bootstrap support for Q55397 as seed ortholog is 100%.

Group of orthologs #313. Best score 61 bits
Score difference with first non-orthologous sequence - M.jannaschii:61 Synechocystis.sp.:13

Q58774              	62.12%		P73970              	100.00%
Q57592              	100.00%		Q6ZE87              	100.00%
Q58614              	100.00%		
Q57590              	92.31%		
Q58612              	56.06%		
Q57877              	13.08%		
Bootstrap support for Q57592 as seed ortholog is 100%.
Bootstrap support for Q58614 as seed ortholog is 100%.
Bootstrap support for P73970 as seed ortholog is 71%.
Alternative seed ortholog is P73498 (13 bits away from this cluster)
Bootstrap support for Q6ZE87 as seed ortholog is 74%.
Alternative seed ortholog is P73498 (13 bits away from this cluster)

Group of orthologs #314. Best score 61 bits
Score difference with first non-orthologous sequence - M.jannaschii:61 Synechocystis.sp.:61

Q58037              	100.00%		P73493              	100.00%
Q58407              	5.35%		
Bootstrap support for Q58037 as seed ortholog is 100%.
Bootstrap support for P73493 as seed ortholog is 100%.

Group of orthologs #315. Best score 61 bits
Score difference with first non-orthologous sequence - M.jannaschii:61 Synechocystis.sp.:61

Q57573              	100.00%		P74158              	100.00%
                    	       		P74542              	100.00%
Bootstrap support for Q57573 as seed ortholog is 100%.
Bootstrap support for P74158 as seed ortholog is 100%.
Bootstrap support for P74542 as seed ortholog is 100%.

Group of orthologs #316. Best score 61 bits
Score difference with first non-orthologous sequence - M.jannaschii:61 Synechocystis.sp.:61

Q57836              	100.00%		P73547              	100.00%
Bootstrap support for Q57836 as seed ortholog is 100%.
Bootstrap support for P73547 as seed ortholog is 100%.

Group of orthologs #317. Best score 61 bits
Score difference with first non-orthologous sequence - M.jannaschii:61 Synechocystis.sp.:61

Q58092              	100.00%		P73405              	100.00%
Bootstrap support for Q58092 as seed ortholog is 100%.
Bootstrap support for P73405 as seed ortholog is 100%.

Group of orthologs #318. Best score 61 bits
Score difference with first non-orthologous sequence - M.jannaschii:61 Synechocystis.sp.:61

Q59039              	100.00%		P73667              	100.00%
Bootstrap support for Q59039 as seed ortholog is 100%.
Bootstrap support for P73667 as seed ortholog is 100%.

Group of orthologs #319. Best score 60 bits
Score difference with first non-orthologous sequence - M.jannaschii:60 Synechocystis.sp.:60

Q57893              	100.00%		P74435              	100.00%
Bootstrap support for Q57893 as seed ortholog is 100%.
Bootstrap support for P74435 as seed ortholog is 100%.

Group of orthologs #320. Best score 59 bits
Score difference with first non-orthologous sequence - M.jannaschii:59 Synechocystis.sp.:59

P54019              	100.00%		P73299              	100.00%
Bootstrap support for P54019 as seed ortholog is 100%.
Bootstrap support for P73299 as seed ortholog is 100%.

Group of orthologs #321. Best score 59 bits
Score difference with first non-orthologous sequence - M.jannaschii:59 Synechocystis.sp.:59

P54029              	100.00%		P74226              	100.00%
Bootstrap support for P54029 as seed ortholog is 100%.
Bootstrap support for P74226 as seed ortholog is 100%.

Group of orthologs #322. Best score 59 bits
Score difference with first non-orthologous sequence - M.jannaschii:59 Synechocystis.sp.:59

P54063              	100.00%		P74229              	100.00%
Bootstrap support for P54063 as seed ortholog is 100%.
Bootstrap support for P74229 as seed ortholog is 100%.

Group of orthologs #323. Best score 59 bits
Score difference with first non-orthologous sequence - M.jannaschii:59 Synechocystis.sp.:7

Q58457              	100.00%		P73983              	100.00%
Bootstrap support for Q58457 as seed ortholog is 100%.
Bootstrap support for P73983 as seed ortholog is 46%.
Alternative seed ortholog is P73996 (7 bits away from this cluster)

Group of orthologs #324. Best score 59 bits
Score difference with first non-orthologous sequence - M.jannaschii:59 Synechocystis.sp.:59

Q58988              	100.00%		Q55842              	100.00%
Bootstrap support for Q58988 as seed ortholog is 100%.
Bootstrap support for Q55842 as seed ortholog is 100%.

Group of orthologs #325. Best score 58 bits
Score difference with first non-orthologous sequence - M.jannaschii:58 Synechocystis.sp.:58

P54023              	100.00%		P73294              	100.00%
Bootstrap support for P54023 as seed ortholog is 100%.
Bootstrap support for P73294 as seed ortholog is 100%.

Group of orthologs #326. Best score 58 bits
Score difference with first non-orthologous sequence - M.jannaschii:58 Synechocystis.sp.:58

Q57751              	100.00%		P73527              	100.00%
Bootstrap support for Q57751 as seed ortholog is 100%.
Bootstrap support for P73527 as seed ortholog is 100%.

Group of orthologs #327. Best score 58 bits
Score difference with first non-orthologous sequence - M.jannaschii:58 Synechocystis.sp.:58

Q58941              	100.00%		P73951              	100.00%
Bootstrap support for Q58941 as seed ortholog is 100%.
Bootstrap support for P73951 as seed ortholog is 100%.

Group of orthologs #328. Best score 58 bits
Score difference with first non-orthologous sequence - M.jannaschii:58 Synechocystis.sp.:58

Q58127              	100.00%		Q55371              	100.00%
Bootstrap support for Q58127 as seed ortholog is 100%.
Bootstrap support for Q55371 as seed ortholog is 100%.

Group of orthologs #329. Best score 57 bits
Score difference with first non-orthologous sequence - M.jannaschii:57 Synechocystis.sp.:57

Q49593              	100.00%		P74737              	100.00%
Bootstrap support for Q49593 as seed ortholog is 100%.
Bootstrap support for P74737 as seed ortholog is 100%.

Group of orthologs #330. Best score 56 bits
Score difference with first non-orthologous sequence - M.jannaschii:56 Synechocystis.sp.:56

Q57667              	100.00%		P73269              	100.00%
                    	       		P74263              	100.00%
Bootstrap support for Q57667 as seed ortholog is 100%.
Bootstrap support for P73269 as seed ortholog is 100%.
Bootstrap support for P74263 as seed ortholog is 100%.

Group of orthologs #331. Best score 56 bits
Score difference with first non-orthologous sequence - M.jannaschii:11 Synechocystis.sp.:7

Q58721              	100.00%		P73808              	100.00%
                    	       		Q55940              	100.00%
Bootstrap support for Q58721 as seed ortholog is 77%.
Bootstrap support for P73808 as seed ortholog is 66%.
Alternative seed ortholog is Q6ZEU5 (7 bits away from this cluster)
Bootstrap support for Q55940 as seed ortholog is 66%.
Alternative seed ortholog is Q6ZEU5 (7 bits away from this cluster)

Group of orthologs #332. Best score 56 bits
Score difference with first non-orthologous sequence - M.jannaschii:56 Synechocystis.sp.:56

Q58437              	100.00%		P73614              	100.00%
Bootstrap support for Q58437 as seed ortholog is 100%.
Bootstrap support for P73614 as seed ortholog is 100%.

Group of orthologs #333. Best score 56 bits
Score difference with first non-orthologous sequence - M.jannaschii:56 Synechocystis.sp.:56

Q57849              	100.00%		Q55480              	100.00%
Bootstrap support for Q57849 as seed ortholog is 100%.
Bootstrap support for Q55480 as seed ortholog is 100%.

Group of orthologs #334. Best score 55 bits
Score difference with first non-orthologous sequence - M.jannaschii:55 Synechocystis.sp.:55

Q58489              	100.00%		Q55741              	100.00%
Q58966              	5.97%		
Bootstrap support for Q58489 as seed ortholog is 100%.
Bootstrap support for Q55741 as seed ortholog is 100%.

Group of orthologs #335. Best score 55 bits
Score difference with first non-orthologous sequence - M.jannaschii:55 Synechocystis.sp.:55

Q57599              	100.00%		P72657              	100.00%
Bootstrap support for Q57599 as seed ortholog is 100%.
Bootstrap support for P72657 as seed ortholog is 100%.

Group of orthologs #336. Best score 55 bits
Score difference with first non-orthologous sequence - M.jannaschii:55 Synechocystis.sp.:55

Q58833              	100.00%		Q55714              	100.00%
Bootstrap support for Q58833 as seed ortholog is 100%.
Bootstrap support for Q55714 as seed ortholog is 100%.

Group of orthologs #337. Best score 52 bits
Score difference with first non-orthologous sequence - M.jannaschii:52 Synechocystis.sp.:52

P54016              	100.00%		P73318              	100.00%
Bootstrap support for P54016 as seed ortholog is 100%.
Bootstrap support for P73318 as seed ortholog is 100%.

Group of orthologs #338. Best score 52 bits
Score difference with first non-orthologous sequence - M.jannaschii:52 Synechocystis.sp.:52

P54109              	100.00%		P74071              	100.00%
Bootstrap support for P54109 as seed ortholog is 100%.
Bootstrap support for P74071 as seed ortholog is 100%.

Group of orthologs #339. Best score 52 bits
Score difference with first non-orthologous sequence - M.jannaschii:52 Synechocystis.sp.:52

Q58619              	100.00%		P73444              	100.00%
Bootstrap support for Q58619 as seed ortholog is 100%.
Bootstrap support for P73444 as seed ortholog is 100%.

Group of orthologs #340. Best score 52 bits
Score difference with first non-orthologous sequence - M.jannaschii:52 Synechocystis.sp.:52

Q58808              	100.00%		P73346              	100.00%
Bootstrap support for Q58808 as seed ortholog is 100%.
Bootstrap support for P73346 as seed ortholog is 100%.

Group of orthologs #341. Best score 52 bits
Score difference with first non-orthologous sequence - M.jannaschii:52 Synechocystis.sp.:52

Q59074              	100.00%		P74010              	100.00%
Bootstrap support for Q59074 as seed ortholog is 100%.
Bootstrap support for P74010 as seed ortholog is 100%.

Group of orthologs #342. Best score 50 bits
Score difference with first non-orthologous sequence - M.jannaschii:50 Synechocystis.sp.:50

Q58706              	100.00%		P73224              	100.00%
                    	       		P73226              	100.00%
Bootstrap support for Q58706 as seed ortholog is 100%.
Bootstrap support for P73224 as seed ortholog is 100%.
Bootstrap support for P73226 as seed ortholog is 100%.

Group of orthologs #343. Best score 50 bits
Score difference with first non-orthologous sequence - M.jannaschii:50 Synechocystis.sp.:50

Q58298              	100.00%		P73799              	100.00%
Q57744              	5.15%		
Bootstrap support for Q58298 as seed ortholog is 100%.
Bootstrap support for P73799 as seed ortholog is 100%.

Group of orthologs #344. Best score 50 bits
Score difference with first non-orthologous sequence - M.jannaschii:50 Synechocystis.sp.:50

Q57964              	100.00%		P72930              	100.00%
Bootstrap support for Q57964 as seed ortholog is 100%.
Bootstrap support for P72930 as seed ortholog is 100%.

Group of orthologs #345. Best score 50 bits
Score difference with first non-orthologous sequence - M.jannaschii:50 Synechocystis.sp.:50

P54062              	100.00%		P74230              	100.00%
Bootstrap support for P54062 as seed ortholog is 100%.
Bootstrap support for P74230 as seed ortholog is 100%.

Group of orthologs #346. Best score 50 bits
Score difference with first non-orthologous sequence - M.jannaschii:50 Synechocystis.sp.:50

Q58960              	100.00%		Q55912              	100.00%
Bootstrap support for Q58960 as seed ortholog is 100%.
Bootstrap support for Q55912 as seed ortholog is 100%.

Group of orthologs #347. Best score 48 bits
Score difference with first non-orthologous sequence - M.jannaschii:48 Synechocystis.sp.:48

Q57755              	100.00%		P52231              	100.00%
                    	       		P52232              	25.88%
                    	       		P73263              	24.71%
                    	       		P72643              	10.00%
Bootstrap support for Q57755 as seed ortholog is 100%.
Bootstrap support for P52231 as seed ortholog is 100%.

Group of orthologs #348. Best score 48 bits
Score difference with first non-orthologous sequence - M.jannaschii:48 Synechocystis.sp.:48

Q60389              	100.00%		P72730              	100.00%
Q58222              	66.28%		Q55419              	35.03%
Bootstrap support for Q60389 as seed ortholog is 100%.
Bootstrap support for P72730 as seed ortholog is 100%.

Group of orthologs #349. Best score 48 bits
Score difference with first non-orthologous sequence - M.jannaschii:48 Synechocystis.sp.:48

P54041              	100.00%		P73307              	100.00%
Bootstrap support for P54041 as seed ortholog is 100%.
Bootstrap support for P73307 as seed ortholog is 100%.

Group of orthologs #350. Best score 47 bits
Score difference with first non-orthologous sequence - M.jannaschii:47 Synechocystis.sp.:47

P54036              	100.00%		P73311              	100.00%
Bootstrap support for P54036 as seed ortholog is 100%.
Bootstrap support for P73311 as seed ortholog is 100%.

Group of orthologs #351. Best score 45 bits
Score difference with first non-orthologous sequence - M.jannaschii:45 Synechocystis.sp.:45

Q57819              	100.00%		Q55398              	100.00%
Bootstrap support for Q57819 as seed ortholog is 100%.
Bootstrap support for Q55398 as seed ortholog is 100%.

Group of orthologs #352. Best score 44 bits
Score difference with first non-orthologous sequence - M.jannaschii:44 Synechocystis.sp.:44

Q59029              	100.00%		P73816              	100.00%
Q58161              	7.88%		
Bootstrap support for Q59029 as seed ortholog is 100%.
Bootstrap support for P73816 as seed ortholog is 100%.

Group of orthologs #353. Best score 44 bits
Score difference with first non-orthologous sequence - M.jannaschii:44 Synechocystis.sp.:44

Q58251              	100.00%		P73255              	100.00%
Bootstrap support for Q58251 as seed ortholog is 100%.
Bootstrap support for P73255 as seed ortholog is 100%.

Group of orthologs #354. Best score 44 bits
Score difference with first non-orthologous sequence - M.jannaschii:44 Synechocystis.sp.:44

Q57653              	100.00%		P74095              	100.00%
Bootstrap support for Q57653 as seed ortholog is 100%.
Bootstrap support for P74095 as seed ortholog is 100%.

Group of orthologs #355. Best score 43 bits
Score difference with first non-orthologous sequence - M.jannaschii:43 Synechocystis.sp.:43

Q57963              	100.00%		P73313              	100.00%
Bootstrap support for Q57963 as seed ortholog is 100%.
Bootstrap support for P73313 as seed ortholog is 100%.

Group of orthologs #356. Best score 42 bits
Score difference with first non-orthologous sequence - M.jannaschii:42 Synechocystis.sp.:42

Q58029              	100.00%		P73906              	100.00%
Bootstrap support for Q58029 as seed ortholog is 100%.
Bootstrap support for P73906 as seed ortholog is 100%.

Group of orthologs #357. Best score 41 bits
Score difference with first non-orthologous sequence - M.jannaschii:41 Synechocystis.sp.:41

Q58465              	100.00%		P72864              	100.00%
Bootstrap support for Q58465 as seed ortholog is 100%.
Bootstrap support for P72864 as seed ortholog is 100%.

Group of orthologs #358. Best score 41 bits
Score difference with first non-orthologous sequence - M.jannaschii:41 Synechocystis.sp.:41

Q58933              	100.00%		Q6ZEA3              	100.00%
Bootstrap support for Q58933 as seed ortholog is 100%.
Bootstrap support for Q6ZEA3 as seed ortholog is 100%.