###################################
190 groups of orthologs
217 in-paralogs from M.jannaschii
222 in-paralogs from P.jiroveci
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 623 bits
Score difference with first non-orthologous sequence - M.jannaschii:623 P.jiroveci:623

Q58445              	100.00%		L0PB43              	100.00%
                    	       		L0PB90              	6.56%
Bootstrap support for Q58445 as seed ortholog is 100%.
Bootstrap support for L0PB43 as seed ortholog is 100%.

Group of orthologs #2. Best score 562 bits
Score difference with first non-orthologous sequence - M.jannaschii:562 P.jiroveci:447

Q58129              	100.00%		L0PDF1              	100.00%
Bootstrap support for Q58129 as seed ortholog is 100%.
Bootstrap support for L0PDF1 as seed ortholog is 100%.

Group of orthologs #3. Best score 562 bits
Score difference with first non-orthologous sequence - M.jannaschii:562 P.jiroveci:488

Q57670              	100.00%		L0PH89              	100.00%
Bootstrap support for Q57670 as seed ortholog is 100%.
Bootstrap support for L0PH89 as seed ortholog is 100%.

Group of orthologs #4. Best score 560 bits
Score difference with first non-orthologous sequence - M.jannaschii:560 P.jiroveci:302

Q58623              	100.00%		L0PGZ9              	100.00%
Bootstrap support for Q58623 as seed ortholog is 100%.
Bootstrap support for L0PGZ9 as seed ortholog is 100%.

Group of orthologs #5. Best score 542 bits
Score difference with first non-orthologous sequence - M.jannaschii:542 P.jiroveci:542

Q60181              	100.00%		L0PG77              	100.00%
Bootstrap support for Q60181 as seed ortholog is 100%.
Bootstrap support for L0PG77 as seed ortholog is 100%.

Group of orthologs #6. Best score 484 bits
Score difference with first non-orthologous sequence - M.jannaschii:484 P.jiroveci:484

Q58574              	100.00%		L0PC65              	100.00%
Bootstrap support for Q58574 as seed ortholog is 100%.
Bootstrap support for L0PC65 as seed ortholog is 100%.

Group of orthologs #7. Best score 482 bits
Score difference with first non-orthologous sequence - M.jannaschii:364 P.jiroveci:178

Q57770              	100.00%		L0PBA5              	100.00%
Bootstrap support for Q57770 as seed ortholog is 100%.
Bootstrap support for L0PBA5 as seed ortholog is 100%.

Group of orthologs #8. Best score 439 bits
Score difference with first non-orthologous sequence - M.jannaschii:439 P.jiroveci:439

Q57681              	100.00%		L0PA45              	100.00%
Bootstrap support for Q57681 as seed ortholog is 100%.
Bootstrap support for L0PA45 as seed ortholog is 100%.

Group of orthologs #9. Best score 416 bits
Score difference with first non-orthologous sequence - M.jannaschii:416 P.jiroveci:416

Q58536              	100.00%		L0PFF9              	100.00%
Bootstrap support for Q58536 as seed ortholog is 100%.
Bootstrap support for L0PFF9 as seed ortholog is 100%.

Group of orthologs #10. Best score 414 bits
Score difference with first non-orthologous sequence - M.jannaschii:414 P.jiroveci:330

Q58050              	100.00%		L0P915              	100.00%
Bootstrap support for Q58050 as seed ortholog is 100%.
Bootstrap support for L0P915 as seed ortholog is 99%.

Group of orthologs #11. Best score 389 bits
Score difference with first non-orthologous sequence - M.jannaschii:389 P.jiroveci:1

Q58405              	100.00%		L0P976              	100.00%
Bootstrap support for Q58405 as seed ortholog is 100%.
Bootstrap support for L0P976 as seed ortholog is 51%.
Alternative seed ortholog is L0PGA5 (1 bits away from this cluster)

Group of orthologs #12. Best score 342 bits
Score difference with first non-orthologous sequence - M.jannaschii:342 P.jiroveci:109

Q58448              	100.00%		L0PBE4              	100.00%
Bootstrap support for Q58448 as seed ortholog is 100%.
Bootstrap support for L0PBE4 as seed ortholog is 95%.

Group of orthologs #13. Best score 324 bits
Score difference with first non-orthologous sequence - M.jannaschii:324 P.jiroveci:7

Q59037              	100.00%		L0PC93              	100.00%
Bootstrap support for Q59037 as seed ortholog is 100%.
Bootstrap support for L0PC93 as seed ortholog is 50%.
Alternative seed ortholog is L0PGL8 (7 bits away from this cluster)

Group of orthologs #14. Best score 320 bits
Score difference with first non-orthologous sequence - M.jannaschii:320 P.jiroveci:1

Q58357              	100.00%		L0PCD8              	100.00%
Bootstrap support for Q58357 as seed ortholog is 100%.
Bootstrap support for L0PCD8 as seed ortholog is 82%.

Group of orthologs #15. Best score 312 bits
Score difference with first non-orthologous sequence - M.jannaschii:312 P.jiroveci:195

Q57669              	100.00%		L0P7M4              	100.00%
                    	       		L0PH62              	64.41%
Bootstrap support for Q57669 as seed ortholog is 100%.
Bootstrap support for L0P7M4 as seed ortholog is 100%.

Group of orthologs #16. Best score 312 bits
Score difference with first non-orthologous sequence - M.jannaschii:312 P.jiroveci:312

Q58783              	100.00%		L0PDJ1              	100.00%
Bootstrap support for Q58783 as seed ortholog is 100%.
Bootstrap support for L0PDJ1 as seed ortholog is 100%.

Group of orthologs #17. Best score 310 bits
Score difference with first non-orthologous sequence - M.jannaschii:165 P.jiroveci:310

Q57565              	100.00%		L0PFN9              	100.00%
                    	       		L0PEF0              	22.46%
Bootstrap support for Q57565 as seed ortholog is 100%.
Bootstrap support for L0PFN9 as seed ortholog is 100%.

Group of orthologs #18. Best score 306 bits
Score difference with first non-orthologous sequence - M.jannaschii:306 P.jiroveci:136

Q58413              	100.00%		L0PDB3              	100.00%
                    	       		L0PCU4              	13.66%
Bootstrap support for Q58413 as seed ortholog is 100%.
Bootstrap support for L0PDB3 as seed ortholog is 98%.

Group of orthologs #19. Best score 305 bits
Score difference with first non-orthologous sequence - M.jannaschii:305 P.jiroveci:176

Q58657              	100.00%		L0PB35              	100.00%
Bootstrap support for Q58657 as seed ortholog is 100%.
Bootstrap support for L0PB35 as seed ortholog is 99%.

Group of orthologs #20. Best score 298 bits
Score difference with first non-orthologous sequence - M.jannaschii:298 P.jiroveci:298

Q59011              	100.00%		L0P7N3              	100.00%
Bootstrap support for Q59011 as seed ortholog is 100%.
Bootstrap support for L0P7N3 as seed ortholog is 100%.

Group of orthologs #21. Best score 293 bits
Score difference with first non-orthologous sequence - M.jannaschii:293 P.jiroveci:293

Q58224              	100.00%		L0P9J7              	100.00%
Bootstrap support for Q58224 as seed ortholog is 100%.
Bootstrap support for L0P9J7 as seed ortholog is 100%.

Group of orthologs #22. Best score 277 bits
Score difference with first non-orthologous sequence - M.jannaschii:277 P.jiroveci:277

Q58531              	100.00%		L0PAQ1              	100.00%
Bootstrap support for Q58531 as seed ortholog is 100%.
Bootstrap support for L0PAQ1 as seed ortholog is 100%.

Group of orthologs #23. Best score 277 bits
Score difference with first non-orthologous sequence - M.jannaschii:277 P.jiroveci:277

Q58815              	100.00%		L0PAS8              	100.00%
Bootstrap support for Q58815 as seed ortholog is 100%.
Bootstrap support for L0PAS8 as seed ortholog is 100%.

Group of orthologs #24. Best score 273 bits
Score difference with first non-orthologous sequence - M.jannaschii:273 P.jiroveci:273

Q57612              	100.00%		L0P8W6              	100.00%
Bootstrap support for Q57612 as seed ortholog is 100%.
Bootstrap support for L0P8W6 as seed ortholog is 100%.

Group of orthologs #25. Best score 264 bits
Score difference with first non-orthologous sequence - M.jannaschii:264 P.jiroveci:264

Q58643              	100.00%		L0PGA8              	100.00%
Bootstrap support for Q58643 as seed ortholog is 100%.
Bootstrap support for L0PGA8 as seed ortholog is 100%.

Group of orthologs #26. Best score 261 bits
Score difference with first non-orthologous sequence - M.jannaschii:261 P.jiroveci:261

Q58425              	100.00%		L0PG02              	100.00%
Bootstrap support for Q58425 as seed ortholog is 100%.
Bootstrap support for L0PG02 as seed ortholog is 100%.

Group of orthologs #27. Best score 257 bits
Score difference with first non-orthologous sequence - M.jannaschii:257 P.jiroveci:66

Q58950              	100.00%		L0P7R1              	100.00%
Bootstrap support for Q58950 as seed ortholog is 100%.
Bootstrap support for L0P7R1 as seed ortholog is 94%.

Group of orthologs #28. Best score 252 bits
Score difference with first non-orthologous sequence - M.jannaschii:166 P.jiroveci:179

Q57911              	100.00%		L0PER3              	100.00%
Bootstrap support for Q57911 as seed ortholog is 99%.
Bootstrap support for L0PER3 as seed ortholog is 99%.

Group of orthologs #29. Best score 250 bits
Score difference with first non-orthologous sequence - M.jannaschii:155 P.jiroveci:160

Q58900              	100.00%		L0P6Z0              	100.00%
Bootstrap support for Q58900 as seed ortholog is 100%.
Bootstrap support for L0P6Z0 as seed ortholog is 99%.

Group of orthologs #30. Best score 248 bits
Score difference with first non-orthologous sequence - M.jannaschii:248 P.jiroveci:248

Q58575              	100.00%		L0PHL5              	100.00%
Bootstrap support for Q58575 as seed ortholog is 100%.
Bootstrap support for L0PHL5 as seed ortholog is 100%.

Group of orthologs #31. Best score 240 bits
Score difference with first non-orthologous sequence - M.jannaschii:240 P.jiroveci:240

Q49593              	100.00%		L0PFP2              	100.00%
                    	       		L0PDH7              	12.45%
Bootstrap support for Q49593 as seed ortholog is 100%.
Bootstrap support for L0PFP2 as seed ortholog is 100%.

Group of orthologs #32. Best score 231 bits
Score difference with first non-orthologous sequence - M.jannaschii:231 P.jiroveci:231

Q58130              	100.00%		L0PB68              	100.00%
Q58991              	100.00%		L0PCQ8              	100.00%
Bootstrap support for Q58130 as seed ortholog is 100%.
Bootstrap support for Q58991 as seed ortholog is 100%.
Bootstrap support for L0PB68 as seed ortholog is 100%.
Bootstrap support for L0PCQ8 as seed ortholog is 100%.

Group of orthologs #33. Best score 229 bits
Score difference with first non-orthologous sequence - M.jannaschii:229 P.jiroveci:229

Q58722              	100.00%		L0PBA8              	100.00%
Bootstrap support for Q58722 as seed ortholog is 100%.
Bootstrap support for L0PBA8 as seed ortholog is 100%.

Group of orthologs #34. Best score 225 bits
Score difference with first non-orthologous sequence - M.jannaschii:225 P.jiroveci:20

Q58884              	100.00%		L0PG07              	100.00%
Q58371              	23.50%		L0PA62              	7.47%
Q57809              	18.59%		L0PG32              	5.99%
Q60275              	7.42%		
Bootstrap support for Q58884 as seed ortholog is 100%.
Bootstrap support for L0PG07 as seed ortholog is 65%.
Alternative seed ortholog is L0PD31 (20 bits away from this cluster)

Group of orthologs #35. Best score 225 bits
Score difference with first non-orthologous sequence - M.jannaschii:225 P.jiroveci:17

Q58083              	100.00%		L0PC64              	100.00%
                    	       		L0P7V6              	36.80%
                    	       		L0P853              	5.63%
Bootstrap support for Q58083 as seed ortholog is 100%.
Bootstrap support for L0PC64 as seed ortholog is 69%.
Alternative seed ortholog is L0PAY5 (17 bits away from this cluster)

Group of orthologs #36. Best score 222 bits
Score difference with first non-orthologous sequence - M.jannaschii:222 P.jiroveci:222

P54014              	100.00%		L0P9D4              	100.00%
Bootstrap support for P54014 as seed ortholog is 100%.
Bootstrap support for L0P9D4 as seed ortholog is 100%.

Group of orthologs #37. Best score 214 bits
Score difference with first non-orthologous sequence - M.jannaschii:214 P.jiroveci:214

Q58347              	100.00%		L0PE57              	100.00%
Bootstrap support for Q58347 as seed ortholog is 100%.
Bootstrap support for L0PE57 as seed ortholog is 100%.

Group of orthologs #38. Best score 213 bits
Score difference with first non-orthologous sequence - M.jannaschii:213 P.jiroveci:146

P54017              	100.00%		L0PID0              	100.00%
Bootstrap support for P54017 as seed ortholog is 100%.
Bootstrap support for L0PID0 as seed ortholog is 100%.

Group of orthologs #39. Best score 207 bits
Score difference with first non-orthologous sequence - M.jannaschii:207 P.jiroveci:28

Q57731              	100.00%		L0PG10              	100.00%
Bootstrap support for Q57731 as seed ortholog is 100%.
Bootstrap support for L0PG10 as seed ortholog is 53%.
Alternative seed ortholog is L0P9R7 (28 bits away from this cluster)

Group of orthologs #40. Best score 206 bits
Score difference with first non-orthologous sequence - M.jannaschii:107 P.jiroveci:206

Q57624              	100.00%		L0PGV2              	100.00%
                    	       		L0PG40              	63.67%
Bootstrap support for Q57624 as seed ortholog is 99%.
Bootstrap support for L0PGV2 as seed ortholog is 100%.

Group of orthologs #41. Best score 200 bits
Score difference with first non-orthologous sequence - M.jannaschii:200 P.jiroveci:200

Q57572              	100.00%		L0PEE3              	100.00%
Bootstrap support for Q57572 as seed ortholog is 100%.
Bootstrap support for L0PEE3 as seed ortholog is 100%.

Group of orthologs #42. Best score 200 bits
Score difference with first non-orthologous sequence - M.jannaschii:200 P.jiroveci:200

Q57984              	100.00%		L0PDQ4              	100.00%
Bootstrap support for Q57984 as seed ortholog is 100%.
Bootstrap support for L0PDQ4 as seed ortholog is 100%.

Group of orthologs #43. Best score 200 bits
Score difference with first non-orthologous sequence - M.jannaschii:200 P.jiroveci:200

Q58295              	100.00%		L0PDK3              	100.00%
Bootstrap support for Q58295 as seed ortholog is 100%.
Bootstrap support for L0PDK3 as seed ortholog is 100%.

Group of orthologs #44. Best score 200 bits
Score difference with first non-orthologous sequence - M.jannaschii:200 P.jiroveci:200

Q58772              	100.00%		L0PH85              	100.00%
Bootstrap support for Q58772 as seed ortholog is 100%.
Bootstrap support for L0PH85 as seed ortholog is 100%.

Group of orthologs #45. Best score 195 bits
Score difference with first non-orthologous sequence - M.jannaschii:195 P.jiroveci:195

Q60178              	100.00%		L0PEY2              	100.00%
Bootstrap support for Q60178 as seed ortholog is 100%.
Bootstrap support for L0PEY2 as seed ortholog is 100%.

Group of orthologs #46. Best score 188 bits
Score difference with first non-orthologous sequence - M.jannaschii:188 P.jiroveci:188

Q58839              	100.00%		L0PA00              	100.00%
Bootstrap support for Q58839 as seed ortholog is 100%.
Bootstrap support for L0PA00 as seed ortholog is 100%.

Group of orthologs #47. Best score 185 bits
Score difference with first non-orthologous sequence - M.jannaschii:185 P.jiroveci:185

P54063              	100.00%		L0PFI8              	100.00%
Bootstrap support for P54063 as seed ortholog is 100%.
Bootstrap support for L0PFI8 as seed ortholog is 100%.

Group of orthologs #48. Best score 182 bits
Score difference with first non-orthologous sequence - M.jannaschii:182 P.jiroveci:71

Q58105              	100.00%		L0PHY6              	100.00%
Bootstrap support for Q58105 as seed ortholog is 100%.
Bootstrap support for L0PHY6 as seed ortholog is 96%.

Group of orthologs #49. Best score 181 bits
Score difference with first non-orthologous sequence - M.jannaschii:181 P.jiroveci:181

Q58992              	100.00%		L0PCX1              	100.00%
Bootstrap support for Q58992 as seed ortholog is 100%.
Bootstrap support for L0PCX1 as seed ortholog is 100%.

Group of orthologs #50. Best score 178 bits
Score difference with first non-orthologous sequence - M.jannaschii:178 P.jiroveci:5

Q60177              	100.00%		L0PB03              	100.00%
Bootstrap support for Q60177 as seed ortholog is 100%.
Bootstrap support for L0PB03 as seed ortholog is 56%.
Alternative seed ortholog is L0PFS8 (5 bits away from this cluster)

Group of orthologs #51. Best score 176 bits
Score difference with first non-orthologous sequence - M.jannaschii:176 P.jiroveci:176

Q58670              	100.00%		L0PG22              	100.00%
                    	       		L0PB04              	78.85%
Bootstrap support for Q58670 as seed ortholog is 100%.
Bootstrap support for L0PG22 as seed ortholog is 100%.

Group of orthologs #52. Best score 171 bits
Score difference with first non-orthologous sequence - M.jannaschii:54 P.jiroveci:171

Q59046              	100.00%		L0P8R6              	100.00%
Bootstrap support for Q59046 as seed ortholog is 87%.
Bootstrap support for L0P8R6 as seed ortholog is 100%.

Group of orthologs #53. Best score 170 bits
Score difference with first non-orthologous sequence - M.jannaschii:170 P.jiroveci:170

Q58659              	100.00%		L0PA88              	100.00%
Bootstrap support for Q58659 as seed ortholog is 100%.
Bootstrap support for L0PA88 as seed ortholog is 100%.

Group of orthologs #54. Best score 170 bits
Score difference with first non-orthologous sequence - M.jannaschii:170 P.jiroveci:24

Q58694              	100.00%		L0PBF6              	100.00%
Bootstrap support for Q58694 as seed ortholog is 100%.
Bootstrap support for L0PBF6 as seed ortholog is 73%.
Alternative seed ortholog is L0PAA4 (24 bits away from this cluster)

Group of orthologs #55. Best score 168 bits
Score difference with first non-orthologous sequence - M.jannaschii:168 P.jiroveci:168

Q57834              	100.00%		L0PAH2              	100.00%
Bootstrap support for Q57834 as seed ortholog is 100%.
Bootstrap support for L0PAH2 as seed ortholog is 100%.

Group of orthologs #56. Best score 166 bits
Score difference with first non-orthologous sequence - M.jannaschii:166 P.jiroveci:166

Q58108              	100.00%		L0PFQ8              	100.00%
Bootstrap support for Q58108 as seed ortholog is 100%.
Bootstrap support for L0PFQ8 as seed ortholog is 100%.

Group of orthologs #57. Best score 165 bits
Score difference with first non-orthologous sequence - M.jannaschii:165 P.jiroveci:165

Q58508              	100.00%		L0P9X7              	100.00%
Bootstrap support for Q58508 as seed ortholog is 100%.
Bootstrap support for L0P9X7 as seed ortholog is 100%.

Group of orthologs #58. Best score 165 bits
Score difference with first non-orthologous sequence - M.jannaschii:165 P.jiroveci:165

Q58339              	100.00%		L0PFT7              	100.00%
Bootstrap support for Q58339 as seed ortholog is 100%.
Bootstrap support for L0PFT7 as seed ortholog is 100%.

Group of orthologs #59. Best score 162 bits
Score difference with first non-orthologous sequence - M.jannaschii:162 P.jiroveci:162

Q57989              	100.00%		L0P9Y7              	100.00%
Bootstrap support for Q57989 as seed ortholog is 100%.
Bootstrap support for L0P9Y7 as seed ortholog is 100%.

Group of orthologs #60. Best score 162 bits
Score difference with first non-orthologous sequence - M.jannaschii:162 P.jiroveci:162

Q58192              	100.00%		L0PFC0              	100.00%
Bootstrap support for Q58192 as seed ortholog is 100%.
Bootstrap support for L0PFC0 as seed ortholog is 100%.

Group of orthologs #61. Best score 161 bits
Score difference with first non-orthologous sequence - M.jannaschii:161 P.jiroveci:161

Q58725              	100.00%		L0PB50              	100.00%
Bootstrap support for Q58725 as seed ortholog is 100%.
Bootstrap support for L0PB50 as seed ortholog is 100%.

Group of orthologs #62. Best score 159 bits
Score difference with first non-orthologous sequence - M.jannaschii:159 P.jiroveci:159

P54060              	100.00%		L0P7H2              	100.00%
Bootstrap support for P54060 as seed ortholog is 100%.
Bootstrap support for L0P7H2 as seed ortholog is 100%.

Group of orthologs #63. Best score 158 bits
Score difference with first non-orthologous sequence - M.jannaschii:158 P.jiroveci:158

Q58767              	100.00%		L0PFS1              	100.00%
Bootstrap support for Q58767 as seed ortholog is 100%.
Bootstrap support for L0PFS1 as seed ortholog is 100%.

Group of orthologs #64. Best score 157 bits
Score difference with first non-orthologous sequence - M.jannaschii:157 P.jiroveci:157

Q57626              	100.00%		L0PB12              	100.00%
Q58633              	20.41%		
Q60355              	11.58%		
Bootstrap support for Q57626 as seed ortholog is 100%.
Bootstrap support for L0PB12 as seed ortholog is 100%.

Group of orthologs #65. Best score 155 bits
Score difference with first non-orthologous sequence - M.jannaschii:155 P.jiroveci:155

Q59020              	100.00%		L0P9G9              	100.00%
Bootstrap support for Q59020 as seed ortholog is 100%.
Bootstrap support for L0P9G9 as seed ortholog is 100%.

Group of orthologs #66. Best score 155 bits
Score difference with first non-orthologous sequence - M.jannaschii:155 P.jiroveci:155

Q57635              	100.00%		L0PFQ5              	100.00%
Bootstrap support for Q57635 as seed ortholog is 100%.
Bootstrap support for L0PFQ5 as seed ortholog is 100%.

Group of orthologs #67. Best score 153 bits
Score difference with first non-orthologous sequence - M.jannaschii:106 P.jiroveci:153

Q58473              	100.00%		L0PBN2              	100.00%
Bootstrap support for Q58473 as seed ortholog is 99%.
Bootstrap support for L0PBN2 as seed ortholog is 100%.

Group of orthologs #68. Best score 151 bits
Score difference with first non-orthologous sequence - M.jannaschii:90 P.jiroveci:151

Q58030              	100.00%		L0P8J0              	100.00%
Bootstrap support for Q58030 as seed ortholog is 99%.
Bootstrap support for L0P8J0 as seed ortholog is 100%.

Group of orthologs #69. Best score 151 bits
Score difference with first non-orthologous sequence - M.jannaschii:151 P.jiroveci:151

P54040              	100.00%		L0PAM2              	100.00%
Bootstrap support for P54040 as seed ortholog is 100%.
Bootstrap support for L0PAM2 as seed ortholog is 100%.

Group of orthologs #70. Best score 149 bits
Score difference with first non-orthologous sequence - M.jannaschii:149 P.jiroveci:149

Q57689              	100.00%		L0PCW8              	100.00%
Bootstrap support for Q57689 as seed ortholog is 100%.
Bootstrap support for L0PCW8 as seed ortholog is 100%.

Group of orthologs #71. Best score 149 bits
Score difference with first non-orthologous sequence - M.jannaschii:149 P.jiroveci:149

Q58542              	100.00%		L0PB28              	100.00%
Bootstrap support for Q58542 as seed ortholog is 100%.
Bootstrap support for L0PB28 as seed ortholog is 100%.

Group of orthologs #72. Best score 148 bits
Score difference with first non-orthologous sequence - M.jannaschii:148 P.jiroveci:148

Q58660              	100.00%		L0PF80              	100.00%
Bootstrap support for Q58660 as seed ortholog is 100%.
Bootstrap support for L0PF80 as seed ortholog is 100%.

Group of orthologs #73. Best score 144 bits
Score difference with first non-orthologous sequence - M.jannaschii:144 P.jiroveci:144

Q58406              	100.00%		L0PCY5              	100.00%
Bootstrap support for Q58406 as seed ortholog is 100%.
Bootstrap support for L0PCY5 as seed ortholog is 100%.

Group of orthologs #74. Best score 142 bits
Score difference with first non-orthologous sequence - M.jannaschii:142 P.jiroveci:142

P54062              	100.00%		L0PHL1              	100.00%
Bootstrap support for P54062 as seed ortholog is 100%.
Bootstrap support for L0PHL1 as seed ortholog is 100%.

Group of orthologs #75. Best score 141 bits
Score difference with first non-orthologous sequence - M.jannaschii:141 P.jiroveci:141

P54012              	100.00%		L0PBS5              	100.00%
Bootstrap support for P54012 as seed ortholog is 100%.
Bootstrap support for L0PBS5 as seed ortholog is 100%.

Group of orthologs #76. Best score 139 bits
Score difference with first non-orthologous sequence - M.jannaschii:139 P.jiroveci:139

Q58558              	100.00%		L0P7L7              	100.00%
Bootstrap support for Q58558 as seed ortholog is 100%.
Bootstrap support for L0P7L7 as seed ortholog is 100%.

Group of orthologs #77. Best score 138 bits
Score difference with first non-orthologous sequence - M.jannaschii:138 P.jiroveci:138

P54018              	100.00%		L0PAE8              	100.00%
Bootstrap support for P54018 as seed ortholog is 100%.
Bootstrap support for L0PAE8 as seed ortholog is 100%.

Group of orthologs #78. Best score 137 bits
Score difference with first non-orthologous sequence - M.jannaschii:137 P.jiroveci:20

Q58771              	100.00%		L0P8F5              	100.00%
Bootstrap support for Q58771 as seed ortholog is 100%.
Bootstrap support for L0P8F5 as seed ortholog is 75%.

Group of orthologs #79. Best score 136 bits
Score difference with first non-orthologous sequence - M.jannaschii:136 P.jiroveci:136

Q58435              	100.00%		L0P8G8              	100.00%
Bootstrap support for Q58435 as seed ortholog is 100%.
Bootstrap support for L0P8G8 as seed ortholog is 100%.

Group of orthologs #80. Best score 136 bits
Score difference with first non-orthologous sequence - M.jannaschii:136 P.jiroveci:136

Q58475              	100.00%		L0PG33              	100.00%
Bootstrap support for Q58475 as seed ortholog is 100%.
Bootstrap support for L0PG33 as seed ortholog is 100%.

Group of orthologs #81. Best score 132 bits
Score difference with first non-orthologous sequence - M.jannaschii:132 P.jiroveci:132

Q57638              	100.00%		L0P8J2              	100.00%
Bootstrap support for Q57638 as seed ortholog is 100%.
Bootstrap support for L0P8J2 as seed ortholog is 100%.

Group of orthologs #82. Best score 131 bits
Score difference with first non-orthologous sequence - M.jannaschii:131 P.jiroveci:131

Q57916              	100.00%		L0PFX9              	100.00%
Bootstrap support for Q57916 as seed ortholog is 100%.
Bootstrap support for L0PFX9 as seed ortholog is 100%.

Group of orthologs #83. Best score 129 bits
Score difference with first non-orthologous sequence - M.jannaschii:129 P.jiroveci:129

Q57935              	100.00%		L0PB96              	100.00%
Q58433              	13.66%		
Bootstrap support for Q57935 as seed ortholog is 100%.
Bootstrap support for L0PB96 as seed ortholog is 100%.

Group of orthologs #84. Best score 129 bits
Score difference with first non-orthologous sequence - M.jannaschii:129 P.jiroveci:129

Q57963              	100.00%		L0PAG0              	100.00%
Bootstrap support for Q57963 as seed ortholog is 100%.
Bootstrap support for L0PAG0 as seed ortholog is 100%.

Group of orthologs #85. Best score 128 bits
Score difference with first non-orthologous sequence - M.jannaschii:128 P.jiroveci:21

Q57586              	100.00%		L0P834              	100.00%
Q57896              	5.85%		
Bootstrap support for Q57586 as seed ortholog is 100%.
Bootstrap support for L0P834 as seed ortholog is 73%.
Alternative seed ortholog is L0PC61 (21 bits away from this cluster)

Group of orthologs #86. Best score 128 bits
Score difference with first non-orthologous sequence - M.jannaschii:128 P.jiroveci:128

Q57981              	100.00%		L0PFY1              	100.00%
Bootstrap support for Q57981 as seed ortholog is 100%.
Bootstrap support for L0PFY1 as seed ortholog is 100%.

Group of orthologs #87. Best score 128 bits
Score difference with first non-orthologous sequence - M.jannaschii:128 P.jiroveci:128

Q58881              	100.00%		L0PDU5              	100.00%
Bootstrap support for Q58881 as seed ortholog is 100%.
Bootstrap support for L0PDU5 as seed ortholog is 100%.

Group of orthologs #88. Best score 126 bits
Score difference with first non-orthologous sequence - M.jannaschii:126 P.jiroveci:126

P54039              	100.00%		L0PCG4              	100.00%
Bootstrap support for P54039 as seed ortholog is 100%.
Bootstrap support for L0PCG4 as seed ortholog is 100%.

Group of orthologs #89. Best score 126 bits
Score difference with first non-orthologous sequence - M.jannaschii:126 P.jiroveci:84

P54019              	100.00%		L0PE58              	100.00%
Bootstrap support for P54019 as seed ortholog is 100%.
Bootstrap support for L0PE58 as seed ortholog is 99%.

Group of orthologs #90. Best score 125 bits
Score difference with first non-orthologous sequence - M.jannaschii:125 P.jiroveci:125

Q57581              	100.00%		L0PFI2              	100.00%
Bootstrap support for Q57581 as seed ortholog is 100%.
Bootstrap support for L0PFI2 as seed ortholog is 100%.

Group of orthologs #91. Best score 124 bits
Score difference with first non-orthologous sequence - M.jannaschii:124 P.jiroveci:124

P54044              	100.00%		L0PA42              	100.00%
Bootstrap support for P54044 as seed ortholog is 100%.
Bootstrap support for L0PA42 as seed ortholog is 100%.

Group of orthologs #92. Best score 124 bits
Score difference with first non-orthologous sequence - M.jannaschii:124 P.jiroveci:124

Q58093              	100.00%		L0PBE8              	100.00%
Bootstrap support for Q58093 as seed ortholog is 100%.
Bootstrap support for L0PBE8 as seed ortholog is 100%.

Group of orthologs #93. Best score 124 bits
Score difference with first non-orthologous sequence - M.jannaschii:124 P.jiroveci:124

Q58998              	100.00%		L0PFR9              	100.00%
Bootstrap support for Q58998 as seed ortholog is 100%.
Bootstrap support for L0PFR9 as seed ortholog is 100%.

Group of orthologs #94. Best score 122 bits
Score difference with first non-orthologous sequence - M.jannaschii:122 P.jiroveci:122

P54041              	100.00%		L0PB66              	100.00%
Bootstrap support for P54041 as seed ortholog is 100%.
Bootstrap support for L0PB66 as seed ortholog is 100%.

Group of orthologs #95. Best score 119 bits
Score difference with first non-orthologous sequence - M.jannaschii:119 P.jiroveci:119

Q58356              	100.00%		L0PBI2              	100.00%
Bootstrap support for Q58356 as seed ortholog is 100%.
Bootstrap support for L0PBI2 as seed ortholog is 100%.

Group of orthologs #96. Best score 118 bits
Score difference with first non-orthologous sequence - M.jannaschii:118 P.jiroveci:50

Q58270              	100.00%		L0PAG1              	100.00%
Bootstrap support for Q58270 as seed ortholog is 100%.
Bootstrap support for L0PAG1 as seed ortholog is 92%.

Group of orthologs #97. Best score 117 bits
Score difference with first non-orthologous sequence - M.jannaschii:117 P.jiroveci:117

P54057              	100.00%		L0P8H6              	100.00%
Bootstrap support for P54057 as seed ortholog is 100%.
Bootstrap support for L0P8H6 as seed ortholog is 100%.

Group of orthologs #98. Best score 117 bits
Score difference with first non-orthologous sequence - M.jannaschii:117 P.jiroveci:117

Q58239              	100.00%		L0PDT2              	100.00%
Bootstrap support for Q58239 as seed ortholog is 100%.
Bootstrap support for L0PDT2 as seed ortholog is 100%.

Group of orthologs #99. Best score 116 bits
Score difference with first non-orthologous sequence - M.jannaschii:116 P.jiroveci:24

Q58859              	100.00%		L0PCS3              	100.00%
Bootstrap support for Q58859 as seed ortholog is 100%.
Bootstrap support for L0PCS3 as seed ortholog is 76%.

Group of orthologs #100. Best score 113 bits
Score difference with first non-orthologous sequence - M.jannaschii:113 P.jiroveci:12

Q58639              	100.00%		L0P905              	100.00%
Q59056              	14.12%		
Bootstrap support for Q58639 as seed ortholog is 100%.
Bootstrap support for L0P905 as seed ortholog is 57%.
Alternative seed ortholog is L0PDF8 (12 bits away from this cluster)

Group of orthologs #101. Best score 111 bits
Score difference with first non-orthologous sequence - M.jannaschii:111 P.jiroveci:69

Q58761              	100.00%		L0PBF0              	100.00%
                    	       		L0P6V9              	25.22%
Bootstrap support for Q58761 as seed ortholog is 100%.
Bootstrap support for L0PBF0 as seed ortholog is 98%.

Group of orthologs #102. Best score 111 bits
Score difference with first non-orthologous sequence - M.jannaschii:111 P.jiroveci:111

P81291              	100.00%		L0PFN4              	100.00%
Q58409              	38.68%		
Bootstrap support for P81291 as seed ortholog is 100%.
Bootstrap support for L0PFN4 as seed ortholog is 100%.

Group of orthologs #103. Best score 111 bits
Score difference with first non-orthologous sequence - M.jannaschii:111 P.jiroveci:111

P54043              	100.00%		L0PC18              	100.00%
Bootstrap support for P54043 as seed ortholog is 100%.
Bootstrap support for L0PC18 as seed ortholog is 100%.

Group of orthologs #104. Best score 111 bits
Score difference with first non-orthologous sequence - M.jannaschii:111 P.jiroveci:111

P54037              	100.00%		L0PCA8              	100.00%
Bootstrap support for P54037 as seed ortholog is 100%.
Bootstrap support for L0PCA8 as seed ortholog is 100%.

Group of orthologs #105. Best score 109 bits
Score difference with first non-orthologous sequence - M.jannaschii:109 P.jiroveci:109

P54049              	100.00%		L0PHG7              	100.00%
Bootstrap support for P54049 as seed ortholog is 100%.
Bootstrap support for L0PHG7 as seed ortholog is 100%.

Group of orthologs #106. Best score 106 bits
Score difference with first non-orthologous sequence - M.jannaschii:106 P.jiroveci:10

Q58634              	100.00%		L0PCJ2              	100.00%
Bootstrap support for Q58634 as seed ortholog is 100%.
Bootstrap support for L0PCJ2 as seed ortholog is 68%.
Alternative seed ortholog is L0PET2 (10 bits away from this cluster)

Group of orthologs #107. Best score 106 bits
Score difference with first non-orthologous sequence - M.jannaschii:106 P.jiroveci:26

Q58560              	100.00%		L0PEA1              	100.00%
Bootstrap support for Q58560 as seed ortholog is 100%.
Bootstrap support for L0PEA1 as seed ortholog is 73%.
Alternative seed ortholog is L0PCF4 (26 bits away from this cluster)

Group of orthologs #108. Best score 105 bits
Score difference with first non-orthologous sequence - M.jannaschii:105 P.jiroveci:59

P54109              	100.00%		L0P9N5              	100.00%
Bootstrap support for P54109 as seed ortholog is 100%.
Bootstrap support for L0P9N5 as seed ortholog is 99%.

Group of orthologs #109. Best score 105 bits
Score difference with first non-orthologous sequence - M.jannaschii:105 P.jiroveci:105

P54033              	100.00%		L0PGY0              	100.00%
Bootstrap support for P54033 as seed ortholog is 100%.
Bootstrap support for L0PGY0 as seed ortholog is 100%.

Group of orthologs #110. Best score 104 bits
Score difference with first non-orthologous sequence - M.jannaschii:104 P.jiroveci:104

Q58759              	100.00%		L0PEG2              	100.00%
Bootstrap support for Q58759 as seed ortholog is 100%.
Bootstrap support for L0PEG2 as seed ortholog is 100%.

Group of orthologs #111. Best score 103 bits
Score difference with first non-orthologous sequence - M.jannaschii:103 P.jiroveci:103

P61159              	100.00%		L0P7K0              	100.00%
Q60314              	13.24%		
Bootstrap support for P61159 as seed ortholog is 100%.
Bootstrap support for L0P7K0 as seed ortholog is 100%.

Group of orthologs #112. Best score 96 bits
Score difference with first non-orthologous sequence - M.jannaschii:96 P.jiroveci:96

Q58011              	100.00%		L0PF44              	100.00%
Bootstrap support for Q58011 as seed ortholog is 100%.
Bootstrap support for L0PF44 as seed ortholog is 100%.

Group of orthologs #113. Best score 94 bits
Score difference with first non-orthologous sequence - M.jannaschii:94 P.jiroveci:94

Q60363              	100.00%		L0P7A1              	100.00%
Bootstrap support for Q60363 as seed ortholog is 100%.
Bootstrap support for L0P7A1 as seed ortholog is 100%.

Group of orthologs #114. Best score 93 bits
Score difference with first non-orthologous sequence - M.jannaschii:93 P.jiroveci:93

P54036              	100.00%		L0P9I0              	100.00%
Bootstrap support for P54036 as seed ortholog is 100%.
Bootstrap support for L0P9I0 as seed ortholog is 100%.

Group of orthologs #115. Best score 91 bits
Score difference with first non-orthologous sequence - M.jannaschii:91 P.jiroveci:91

Q60357              	100.00%		L0PEV9              	100.00%
Bootstrap support for Q60357 as seed ortholog is 100%.
Bootstrap support for L0PEV9 as seed ortholog is 100%.

Group of orthologs #116. Best score 90 bits
Score difference with first non-orthologous sequence - M.jannaschii:9 P.jiroveci:21

Q58967              	100.00%		L0PBI4              	100.00%
Q58488              	20.43%		L0P9A8              	33.55%
Q58206              	8.82%		L0PHB9              	33.55%
Q57855              	8.60%		L0PCR9              	6.87%
Q58903              	6.45%		
Q58418              	5.81%		
Bootstrap support for Q58967 as seed ortholog is 61%.
Alternative seed ortholog is Q58664 (9 bits away from this cluster)
Bootstrap support for L0PBI4 as seed ortholog is 73%.
Alternative seed ortholog is L0P6Z2 (21 bits away from this cluster)

Group of orthologs #117. Best score 90 bits
Score difference with first non-orthologous sequence - M.jannaschii:90 P.jiroveci:39

Q58501              	100.00%		L0PD82              	100.00%
                    	       		L0P6Q8              	44.78%
                    	       		L0P8N0              	8.81%
Bootstrap support for Q58501 as seed ortholog is 100%.
Bootstrap support for L0PD82 as seed ortholog is 81%.

Group of orthologs #118. Best score 90 bits
Score difference with first non-orthologous sequence - M.jannaschii:90 P.jiroveci:18

P54030              	100.00%		L0PBZ6              	100.00%
Bootstrap support for P54030 as seed ortholog is 100%.
Bootstrap support for L0PBZ6 as seed ortholog is 79%.

Group of orthologs #119. Best score 89 bits
Score difference with first non-orthologous sequence - M.jannaschii:89 P.jiroveci:89

Q57907              	100.00%		L0PDW0              	100.00%
Bootstrap support for Q57907 as seed ortholog is 100%.
Bootstrap support for L0PDW0 as seed ortholog is 100%.

Group of orthologs #120. Best score 88 bits
Score difference with first non-orthologous sequence - M.jannaschii:88 P.jiroveci:46

Q58635              	100.00%		L0PBY9              	100.00%
Bootstrap support for Q58635 as seed ortholog is 100%.
Bootstrap support for L0PBY9 as seed ortholog is 55%.
Alternative seed ortholog is L0PB60 (46 bits away from this cluster)

Group of orthologs #121. Best score 86 bits
Score difference with first non-orthologous sequence - M.jannaschii:86 P.jiroveci:86

Q58977              	100.00%		L0PFQ3              	100.00%
Bootstrap support for Q58977 as seed ortholog is 100%.
Bootstrap support for L0PFQ3 as seed ortholog is 100%.

Group of orthologs #122. Best score 85 bits
Score difference with first non-orthologous sequence - M.jannaschii:85 P.jiroveci:85

P54029              	100.00%		L0P9N4              	100.00%
Bootstrap support for P54029 as seed ortholog is 100%.
Bootstrap support for L0P9N4 as seed ortholog is 100%.

Group of orthologs #123. Best score 85 bits
Score difference with first non-orthologous sequence - M.jannaschii:85 P.jiroveci:85

Q59000              	100.00%		L0P8P8              	100.00%
Bootstrap support for Q59000 as seed ortholog is 100%.
Bootstrap support for L0P8P8 as seed ortholog is 100%.

Group of orthologs #124. Best score 85 bits
Score difference with first non-orthologous sequence - M.jannaschii:85 P.jiroveci:85

Q57648              	100.00%		L0PEQ4              	100.00%
Bootstrap support for Q57648 as seed ortholog is 100%.
Bootstrap support for L0PEQ4 as seed ortholog is 100%.

Group of orthologs #125. Best score 85 bits
Score difference with first non-orthologous sequence - M.jannaschii:85 P.jiroveci:85

Q58827              	100.00%		L0PBJ0              	100.00%
Bootstrap support for Q58827 as seed ortholog is 100%.
Bootstrap support for L0PBJ0 as seed ortholog is 100%.

Group of orthologs #126. Best score 85 bits
Score difference with first non-orthologous sequence - M.jannaschii:85 P.jiroveci:4

Q58619              	100.00%		L0PD68              	100.00%
Bootstrap support for Q58619 as seed ortholog is 100%.
Bootstrap support for L0PD68 as seed ortholog is 53%.
Alternative seed ortholog is L0PD58 (4 bits away from this cluster)

Group of orthologs #127. Best score 84 bits
Score difference with first non-orthologous sequence - M.jannaschii:84 P.jiroveci:84

Q58500              	100.00%		L0P9C9              	100.00%
Q57842              	10.62%		
Bootstrap support for Q58500 as seed ortholog is 100%.
Bootstrap support for L0P9C9 as seed ortholog is 100%.

Group of orthologs #128. Best score 84 bits
Score difference with first non-orthologous sequence - M.jannaschii:84 P.jiroveci:84

Q58577              	100.00%		L0PF49              	100.00%
Q58469              	7.25%		
Bootstrap support for Q58577 as seed ortholog is 100%.
Bootstrap support for L0PF49 as seed ortholog is 100%.

Group of orthologs #129. Best score 83 bits
Score difference with first non-orthologous sequence - M.jannaschii:83 P.jiroveci:83

Q60335              	100.00%		L0PF71              	100.00%
Bootstrap support for Q60335 as seed ortholog is 100%.
Bootstrap support for L0PF71 as seed ortholog is 100%.

Group of orthologs #130. Best score 82 bits
Score difference with first non-orthologous sequence - M.jannaschii:82 P.jiroveci:82

Q57977              	100.00%		L0PBT0              	100.00%
Bootstrap support for Q57977 as seed ortholog is 100%.
Bootstrap support for L0PBT0 as seed ortholog is 100%.

Group of orthologs #131. Best score 79 bits
Score difference with first non-orthologous sequence - M.jannaschii:22 P.jiroveci:79

Q58931              	100.00%		L0P7Y5              	100.00%
Bootstrap support for Q58931 as seed ortholog is 77%.
Bootstrap support for L0P7Y5 as seed ortholog is 100%.

Group of orthologs #132. Best score 79 bits
Score difference with first non-orthologous sequence - M.jannaschii:79 P.jiroveci:79

Q58070              	100.00%		L0PG08              	100.00%
Bootstrap support for Q58070 as seed ortholog is 100%.
Bootstrap support for L0PG08 as seed ortholog is 100%.

Group of orthologs #133. Best score 78 bits
Score difference with first non-orthologous sequence - M.jannaschii:78 P.jiroveci:78

Q57815              	100.00%		L0P7V4              	100.00%
Bootstrap support for Q57815 as seed ortholog is 100%.
Bootstrap support for L0P7V4 as seed ortholog is 100%.

Group of orthologs #134. Best score 78 bits
Score difference with first non-orthologous sequence - M.jannaschii:78 P.jiroveci:6

Q59069              	100.00%		L0PEW5              	100.00%
Bootstrap support for Q59069 as seed ortholog is 100%.
Bootstrap support for L0PEW5 as seed ortholog is 53%.
Alternative seed ortholog is L0P949 (6 bits away from this cluster)

Group of orthologs #135. Best score 77 bits
Score difference with first non-orthologous sequence - M.jannaschii:77 P.jiroveci:77

Q57741              	100.00%		L0PE02              	100.00%
Bootstrap support for Q57741 as seed ortholog is 100%.
Bootstrap support for L0PE02 as seed ortholog is 100%.

Group of orthologs #136. Best score 76 bits
Score difference with first non-orthologous sequence - M.jannaschii:76 P.jiroveci:76

Q60354              	100.00%		L0P7L9              	100.00%
Bootstrap support for Q60354 as seed ortholog is 100%.
Bootstrap support for L0P7L9 as seed ortholog is 100%.

Group of orthologs #137. Best score 74 bits
Score difference with first non-orthologous sequence - M.jannaschii:74 P.jiroveci:74

Q57599              	100.00%		L0PCU6              	100.00%
Bootstrap support for Q57599 as seed ortholog is 100%.
Bootstrap support for L0PCU6 as seed ortholog is 100%.

Group of orthologs #138. Best score 73 bits
Score difference with first non-orthologous sequence - M.jannaschii:73 P.jiroveci:73

P54047              	100.00%		L0PB81              	100.00%
Bootstrap support for P54047 as seed ortholog is 100%.
Bootstrap support for L0PB81 as seed ortholog is 100%.

Group of orthologs #139. Best score 72 bits
Score difference with first non-orthologous sequence - M.jannaschii:72 P.jiroveci:72

Q58609              	100.00%		L0PA77              	100.00%
Bootstrap support for Q58609 as seed ortholog is 100%.
Bootstrap support for L0PA77 as seed ortholog is 100%.

Group of orthologs #140. Best score 72 bits
Score difference with first non-orthologous sequence - M.jannaschii:72 P.jiroveci:72

P54024              	100.00%		L0PGZ5              	100.00%
Bootstrap support for P54024 as seed ortholog is 100%.
Bootstrap support for L0PGZ5 as seed ortholog is 100%.

Group of orthologs #141. Best score 71 bits
Score difference with first non-orthologous sequence - M.jannaschii:10 P.jiroveci:20

Q58796              	100.00%		L0PH46              	100.00%
                    	       		L0P6W8              	83.97%
                    	       		L0PEM1              	9.19%
Bootstrap support for Q58796 as seed ortholog is 74%.
Alternative seed ortholog is Q58969 (10 bits away from this cluster)
Bootstrap support for L0PH46 as seed ortholog is 65%.
Alternative seed ortholog is L0P8M8 (20 bits away from this cluster)

Group of orthologs #142. Best score 71 bits
Score difference with first non-orthologous sequence - M.jannaschii:71 P.jiroveci:71

Q58370              	100.00%		L0PEZ2              	100.00%
                    	       		L0PH30              	100.00%
Bootstrap support for Q58370 as seed ortholog is 100%.
Bootstrap support for L0PEZ2 as seed ortholog is 100%.
Bootstrap support for L0PH30 as seed ortholog is 100%.

Group of orthologs #143. Best score 71 bits
Score difference with first non-orthologous sequence - M.jannaschii:71 P.jiroveci:71

Q58548              	100.00%		L0P9L0              	100.00%
Bootstrap support for Q58548 as seed ortholog is 100%.
Bootstrap support for L0P9L0 as seed ortholog is 100%.

Group of orthologs #144. Best score 70 bits
Score difference with first non-orthologous sequence - M.jannaschii:70 P.jiroveci:70

Q58216              	100.00%		L0PF23              	100.00%
Bootstrap support for Q58216 as seed ortholog is 100%.
Bootstrap support for L0PF23 as seed ortholog is 100%.

Group of orthologs #145. Best score 69 bits
Score difference with first non-orthologous sequence - M.jannaschii:69 P.jiroveci:69

P54061              	100.00%		L0PBI9              	100.00%
Bootstrap support for P54061 as seed ortholog is 100%.
Bootstrap support for L0PBI9 as seed ortholog is 100%.

Group of orthologs #146. Best score 69 bits
Score difference with first non-orthologous sequence - M.jannaschii:69 P.jiroveci:69

Q58276              	100.00%		L0PDT5              	100.00%
Bootstrap support for Q58276 as seed ortholog is 100%.
Bootstrap support for L0PDT5 as seed ortholog is 100%.

Group of orthologs #147. Best score 68 bits
Score difference with first non-orthologous sequence - M.jannaschii:68 P.jiroveci:68

P54038              	100.00%		L0PG87              	100.00%
Bootstrap support for P54038 as seed ortholog is 100%.
Bootstrap support for L0PG87 as seed ortholog is 100%.

Group of orthologs #148. Best score 67 bits
Score difference with first non-orthologous sequence - M.jannaschii:67 P.jiroveci:67

P54059              	100.00%		L0PFL8              	100.00%
Bootstrap support for P54059 as seed ortholog is 100%.
Bootstrap support for L0PFL8 as seed ortholog is 100%.

Group of orthologs #149. Best score 67 bits
Score difference with first non-orthologous sequence - M.jannaschii:67 P.jiroveci:67

Q58625              	100.00%		L0PD65              	100.00%
Bootstrap support for Q58625 as seed ortholog is 100%.
Bootstrap support for L0PD65 as seed ortholog is 100%.

Group of orthologs #150. Best score 66 bits
Score difference with first non-orthologous sequence - M.jannaschii:66 P.jiroveci:66

Q58925              	100.00%		L0PDP9              	100.00%
Bootstrap support for Q58925 as seed ortholog is 100%.
Bootstrap support for L0PDP9 as seed ortholog is 100%.

Group of orthologs #151. Best score 64 bits
Score difference with first non-orthologous sequence - M.jannaschii:64 P.jiroveci:64

P54066              	100.00%		L0PDG4              	100.00%
Bootstrap support for P54066 as seed ortholog is 100%.
Bootstrap support for L0PDG4 as seed ortholog is 100%.

Group of orthologs #152. Best score 64 bits
Score difference with first non-orthologous sequence - M.jannaschii:64 P.jiroveci:64

Q58944              	100.00%		L0PA09              	100.00%
Bootstrap support for Q58944 as seed ortholog is 100%.
Bootstrap support for L0PA09 as seed ortholog is 100%.

Group of orthologs #153. Best score 64 bits
Score difference with first non-orthologous sequence - M.jannaschii:64 P.jiroveci:64

Q58987              	100.00%		L0PFN8              	100.00%
Bootstrap support for Q58987 as seed ortholog is 100%.
Bootstrap support for L0PFN8 as seed ortholog is 100%.

Group of orthologs #154. Best score 63 bits
Score difference with first non-orthologous sequence - M.jannaschii:63 P.jiroveci:63

Q58337              	100.00%		L0P8P0              	100.00%
Bootstrap support for Q58337 as seed ortholog is 100%.
Bootstrap support for L0P8P0 as seed ortholog is 100%.

Group of orthologs #155. Best score 62 bits
Score difference with first non-orthologous sequence - M.jannaschii:62 P.jiroveci:62

Q59001              	100.00%		L0PDF3              	100.00%
Bootstrap support for Q59001 as seed ortholog is 100%.
Bootstrap support for L0PDF3 as seed ortholog is 100%.

Group of orthologs #156. Best score 61 bits
Score difference with first non-orthologous sequence - M.jannaschii:61 P.jiroveci:61

Q57885              	100.00%		L0PCU0              	100.00%
Bootstrap support for Q57885 as seed ortholog is 100%.
Bootstrap support for L0PCU0 as seed ortholog is 100%.

Group of orthologs #157. Best score 59 bits
Score difference with first non-orthologous sequence - M.jannaschii:59 P.jiroveci:59

Q58352              	100.00%		L0PD55              	100.00%
                    	       		L0PE41              	7.53%
Bootstrap support for Q58352 as seed ortholog is 100%.
Bootstrap support for L0PD55 as seed ortholog is 100%.

Group of orthologs #158. Best score 59 bits
Score difference with first non-orthologous sequence - M.jannaschii:59 P.jiroveci:59

P54023              	100.00%		L0P9Y2              	100.00%
Bootstrap support for P54023 as seed ortholog is 100%.
Bootstrap support for L0P9Y2 as seed ortholog is 100%.

Group of orthologs #159. Best score 59 bits
Score difference with first non-orthologous sequence - M.jannaschii:59 P.jiroveci:59

Q58941              	100.00%		L0PC82              	100.00%
Bootstrap support for Q58941 as seed ortholog is 100%.
Bootstrap support for L0PC82 as seed ortholog is 100%.

Group of orthologs #160. Best score 58 bits
Score difference with first non-orthologous sequence - M.jannaschii:58 P.jiroveci:58

Q58905              	100.00%		L0PF35              	100.00%
Bootstrap support for Q58905 as seed ortholog is 100%.
Bootstrap support for L0PF35 as seed ortholog is 100%.

Group of orthologs #161. Best score 57 bits
Score difference with first non-orthologous sequence - M.jannaschii:57 P.jiroveci:57

Q57711              	100.00%		L0PGD9              	100.00%
Q58350              	44.46%		
O06917              	17.66%		
Q58741              	15.89%		
Bootstrap support for Q57711 as seed ortholog is 100%.
Bootstrap support for L0PGD9 as seed ortholog is 100%.

Group of orthologs #162. Best score 57 bits
Score difference with first non-orthologous sequence - M.jannaschii:57 P.jiroveci:57

Q57649              	100.00%		L0PBK0              	100.00%
Bootstrap support for Q57649 as seed ortholog is 100%.
Bootstrap support for L0PBK0 as seed ortholog is 100%.

Group of orthologs #163. Best score 57 bits
Score difference with first non-orthologous sequence - M.jannaschii:57 P.jiroveci:57

Q58933              	100.00%		L0PHA7              	100.00%
Bootstrap support for Q58933 as seed ortholog is 100%.
Bootstrap support for L0PHA7 as seed ortholog is 100%.

Group of orthologs #164. Best score 56 bits
Score difference with first non-orthologous sequence - M.jannaschii:56 P.jiroveci:56

P54065              	100.00%		L0P8G4              	100.00%
Bootstrap support for P54065 as seed ortholog is 100%.
Bootstrap support for L0P8G4 as seed ortholog is 100%.

Group of orthologs #165. Best score 56 bits
Score difference with first non-orthologous sequence - M.jannaschii:56 P.jiroveci:56

Q57752              	100.00%		L0PCK2              	100.00%
Bootstrap support for Q57752 as seed ortholog is 100%.
Bootstrap support for L0PCK2 as seed ortholog is 100%.

Group of orthologs #166. Best score 56 bits
Score difference with first non-orthologous sequence - M.jannaschii:56 P.jiroveci:56

Q58509              	100.00%		L0PHP6              	100.00%
Bootstrap support for Q58509 as seed ortholog is 100%.
Bootstrap support for L0PHP6 as seed ortholog is 100%.

Group of orthologs #167. Best score 55 bits
Score difference with first non-orthologous sequence - M.jannaschii:55 P.jiroveci:55

Q58237              	100.00%		L0PD03              	100.00%
                    	       		L0P861              	40.12%
Bootstrap support for Q58237 as seed ortholog is 100%.
Bootstrap support for L0PD03 as seed ortholog is 100%.

Group of orthologs #168. Best score 54 bits
Score difference with first non-orthologous sequence - M.jannaschii:54 P.jiroveci:54

Q57840              	100.00%		L0P7Z9              	100.00%
Bootstrap support for Q57840 as seed ortholog is 100%.
Bootstrap support for L0P7Z9 as seed ortholog is 100%.

Group of orthologs #169. Best score 54 bits
Score difference with first non-orthologous sequence - M.jannaschii:54 P.jiroveci:54

P54020              	100.00%		L0PBS4              	100.00%
Bootstrap support for P54020 as seed ortholog is 100%.
Bootstrap support for L0PBS4 as seed ortholog is 100%.

Group of orthologs #170. Best score 54 bits
Score difference with first non-orthologous sequence - M.jannaschii:54 P.jiroveci:54

P54046              	100.00%		L0PCG0              	100.00%
Bootstrap support for P54046 as seed ortholog is 100%.
Bootstrap support for L0PCG0 as seed ortholog is 100%.

Group of orthologs #171. Best score 54 bits
Score difference with first non-orthologous sequence - M.jannaschii:54 P.jiroveci:54

Q57950              	100.00%		L0PHC9              	100.00%
Bootstrap support for Q57950 as seed ortholog is 100%.
Bootstrap support for L0PHC9 as seed ortholog is 100%.

Group of orthologs #172. Best score 53 bits
Score difference with first non-orthologous sequence - M.jannaschii:53 P.jiroveci:53

P54053              	100.00%		L0PCQ4              	100.00%
Bootstrap support for P54053 as seed ortholog is 100%.
Bootstrap support for L0PCQ4 as seed ortholog is 100%.

Group of orthologs #173. Best score 53 bits
Score difference with first non-orthologous sequence - M.jannaschii:53 P.jiroveci:53

Q58728              	100.00%		L0P9P0              	100.00%
Bootstrap support for Q58728 as seed ortholog is 100%.
Bootstrap support for L0P9P0 as seed ortholog is 100%.

Group of orthologs #174. Best score 51 bits
Score difference with first non-orthologous sequence - M.jannaschii:51 P.jiroveci:51

P54009              	100.00%		L0P940              	100.00%
Bootstrap support for P54009 as seed ortholog is 100%.
Bootstrap support for L0P940 as seed ortholog is 100%.

Group of orthologs #175. Best score 51 bits
Score difference with first non-orthologous sequence - M.jannaschii:51 P.jiroveci:51

Q58103              	100.00%		L0P9X6              	100.00%
Bootstrap support for Q58103 as seed ortholog is 100%.
Bootstrap support for L0P9X6 as seed ortholog is 100%.

Group of orthologs #176. Best score 50 bits
Score difference with first non-orthologous sequence - M.jannaschii:50 P.jiroveci:50

Q58383              	100.00%		L0P7T6              	100.00%
Q60377              	22.70%		L0PF25              	89.83%
Bootstrap support for Q58383 as seed ortholog is 100%.
Bootstrap support for L0P7T6 as seed ortholog is 100%.

Group of orthologs #177. Best score 49 bits
Score difference with first non-orthologous sequence - M.jannaschii:49 P.jiroveci:49

Q58338              	100.00%		L0PAB2              	100.00%
Q58292              	7.65%		
Bootstrap support for Q58338 as seed ortholog is 100%.
Bootstrap support for L0PAB2 as seed ortholog is 100%.

Group of orthologs #178. Best score 49 bits
Score difference with first non-orthologous sequence - M.jannaschii:49 P.jiroveci:49

Q58414              	100.00%		L0PE74              	100.00%
Bootstrap support for Q58414 as seed ortholog is 100%.
Bootstrap support for L0PE74 as seed ortholog is 100%.

Group of orthologs #179. Best score 49 bits
Score difference with first non-orthologous sequence - M.jannaschii:49 P.jiroveci:49

Q60176              	100.00%		L0PE61              	100.00%
Bootstrap support for Q60176 as seed ortholog is 100%.
Bootstrap support for L0PE61 as seed ortholog is 100%.

Group of orthologs #180. Best score 49 bits
Score difference with first non-orthologous sequence - M.jannaschii:49 P.jiroveci:49

Q58923              	100.00%		L0PF73              	100.00%
Bootstrap support for Q58923 as seed ortholog is 100%.
Bootstrap support for L0PF73 as seed ortholog is 100%.

Group of orthologs #181. Best score 48 bits
Score difference with first non-orthologous sequence - M.jannaschii:48 P.jiroveci:48

Q57708              	100.00%		L0PFY9              	100.00%
Bootstrap support for Q57708 as seed ortholog is 100%.
Bootstrap support for L0PFY9 as seed ortholog is 100%.

Group of orthologs #182. Best score 48 bits
Score difference with first non-orthologous sequence - M.jannaschii:48 P.jiroveci:48

Q58436              	100.00%		L0PEE8              	100.00%
Bootstrap support for Q58436 as seed ortholog is 100%.
Bootstrap support for L0PEE8 as seed ortholog is 100%.

Group of orthologs #183. Best score 47 bits
Score difference with first non-orthologous sequence - M.jannaschii:47 P.jiroveci:47

Q58298              	100.00%		L0P838              	100.00%
Q57744              	5.91%		
Bootstrap support for Q58298 as seed ortholog is 100%.
Bootstrap support for L0P838 as seed ortholog is 100%.

Group of orthologs #184. Best score 47 bits
Score difference with first non-orthologous sequence - M.jannaschii:47 P.jiroveci:47

Q58622              	100.00%		L0PBL3              	100.00%
Q58799              	7.46%		
Bootstrap support for Q58622 as seed ortholog is 100%.
Bootstrap support for L0PBL3 as seed ortholog is 100%.

Group of orthologs #185. Best score 47 bits
Score difference with first non-orthologous sequence - M.jannaschii:47 P.jiroveci:47

Q57893              	100.00%		L0P9H8              	100.00%
Bootstrap support for Q57893 as seed ortholog is 100%.
Bootstrap support for L0P9H8 as seed ortholog is 100%.

Group of orthologs #186. Best score 47 bits
Score difference with first non-orthologous sequence - M.jannaschii:47 P.jiroveci:47

Q57832              	100.00%		L0PE14              	100.00%
Bootstrap support for Q57832 as seed ortholog is 100%.
Bootstrap support for L0PE14 as seed ortholog is 100%.

Group of orthologs #187. Best score 47 bits
Score difference with first non-orthologous sequence - M.jannaschii:47 P.jiroveci:47

Q60182              	100.00%		L0PI13              	100.00%
Bootstrap support for Q60182 as seed ortholog is 100%.
Bootstrap support for L0PI13 as seed ortholog is 100%.

Group of orthologs #188. Best score 44 bits
Score difference with first non-orthologous sequence - M.jannaschii:44 P.jiroveci:44

Q58735              	100.00%		L0P8I7              	100.00%
                    	       		L0PGP6              	19.68%
                    	       		L0P8M4              	15.43%
                    	       		L0PCC3              	13.56%
                    	       		L0PEF5              	11.44%
                    	       		L0PIS9              	10.64%
                    	       		L0PHW8              	10.11%
                    	       		L0PE79              	6.65%
Bootstrap support for Q58735 as seed ortholog is 100%.
Bootstrap support for L0P8I7 as seed ortholog is 100%.

Group of orthologs #189. Best score 41 bits
Score difference with first non-orthologous sequence - M.jannaschii:41 P.jiroveci:41

Q58365              	100.00%		L0PF21              	100.00%
Q60317              	13.42%		L0P6T3              	38.69%
Q58097              	7.34%		
Bootstrap support for Q58365 as seed ortholog is 100%.
Bootstrap support for L0PF21 as seed ortholog is 100%.

Group of orthologs #190. Best score 40 bits
Score difference with first non-orthologous sequence - M.jannaschii:40 P.jiroveci:40

Q57917              	100.00%		L0PGU4              	100.00%
Bootstrap support for Q57917 as seed ortholog is 100%.
Bootstrap support for L0PGU4 as seed ortholog is 100%.