###################################
293 groups of orthologs
332 in-paralogs from M.jannaschii
374 in-paralogs from P.indica
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 690 bits
Score difference with first non-orthologous sequence - M.jannaschii:690 P.indica:189

Q58556              	100.00%		G4TFJ6              	100.00%
Bootstrap support for Q58556 as seed ortholog is 100%.
Bootstrap support for G4TFJ6 as seed ortholog is 99%.

Group of orthologs #2. Best score 606 bits
Score difference with first non-orthologous sequence - M.jannaschii:606 P.indica:190

Q58445              	100.00%		G4T6T2              	100.00%
                    	       		G4T8R1              	5.12%
Bootstrap support for Q58445 as seed ortholog is 100%.
Bootstrap support for G4T6T2 as seed ortholog is 99%.

Group of orthologs #3. Best score 574 bits
Score difference with first non-orthologous sequence - M.jannaschii:574 P.indica:460

Q57670              	100.00%		G4TM37              	100.00%
Bootstrap support for Q57670 as seed ortholog is 100%.
Bootstrap support for G4TM37 as seed ortholog is 100%.

Group of orthologs #4. Best score 546 bits
Score difference with first non-orthologous sequence - M.jannaschii:546 P.indica:440

Q58129              	100.00%		G4T9J5              	100.00%
Bootstrap support for Q58129 as seed ortholog is 100%.
Bootstrap support for G4T9J5 as seed ortholog is 100%.

Group of orthologs #5. Best score 542 bits
Score difference with first non-orthologous sequence - M.jannaschii:542 P.indica:401

Q57669              	100.00%		G4TJJ1              	100.00%
Bootstrap support for Q57669 as seed ortholog is 100%.
Bootstrap support for G4TJJ1 as seed ortholog is 100%.

Group of orthologs #6. Best score 525 bits
Score difference with first non-orthologous sequence - M.jannaschii:525 P.indica:244

Q58357              	100.00%		G4TAJ1              	100.00%
Bootstrap support for Q58357 as seed ortholog is 100%.
Bootstrap support for G4TAJ1 as seed ortholog is 99%.

Group of orthologs #7. Best score 496 bits
Score difference with first non-orthologous sequence - M.jannaschii:496 P.indica:496

Q60181              	100.00%		G4T5Z4              	100.00%
                    	       		G4TVM8              	8.12%
Bootstrap support for Q60181 as seed ortholog is 100%.
Bootstrap support for G4T5Z4 as seed ortholog is 100%.

Group of orthologs #8. Best score 493 bits
Score difference with first non-orthologous sequence - M.jannaschii:493 P.indica:493

Q58574              	100.00%		G4T5Y5              	100.00%
Bootstrap support for Q58574 as seed ortholog is 100%.
Bootstrap support for G4T5Y5 as seed ortholog is 100%.

Group of orthologs #9. Best score 472 bits
Score difference with first non-orthologous sequence - M.jannaschii:358 P.indica:163

Q57770              	100.00%		G4TCT2              	100.00%
Bootstrap support for Q57770 as seed ortholog is 100%.
Bootstrap support for G4TCT2 as seed ortholog is 99%.

Group of orthologs #10. Best score 447 bits
Score difference with first non-orthologous sequence - M.jannaschii:447 P.indica:447

Q60179              	100.00%		G4TI18              	100.00%
Bootstrap support for Q60179 as seed ortholog is 100%.
Bootstrap support for G4TI18 as seed ortholog is 100%.

Group of orthologs #11. Best score 440 bits
Score difference with first non-orthologous sequence - M.jannaschii:440 P.indica:135

Q58672              	100.00%		G4T779              	100.00%
Bootstrap support for Q58672 as seed ortholog is 100%.
Bootstrap support for G4T779 as seed ortholog is 99%.

Group of orthologs #12. Best score 439 bits
Score difference with first non-orthologous sequence - M.jannaschii:439 P.indica:439

Q58626              	100.00%		G4TFB9              	100.00%
Bootstrap support for Q58626 as seed ortholog is 100%.
Bootstrap support for G4TFB9 as seed ortholog is 100%.

Group of orthologs #13. Best score 434 bits
Score difference with first non-orthologous sequence - M.jannaschii:434 P.indica:434

Q60173              	100.00%		G4TXJ0              	100.00%
Bootstrap support for Q60173 as seed ortholog is 100%.
Bootstrap support for G4TXJ0 as seed ortholog is 100%.

Group of orthologs #14. Best score 417 bits
Score difference with first non-orthologous sequence - M.jannaschii:417 P.indica:417

Q57681              	100.00%		G4TPH5              	100.00%
Bootstrap support for Q57681 as seed ortholog is 100%.
Bootstrap support for G4TPH5 as seed ortholog is 100%.

Group of orthologs #15. Best score 410 bits
Score difference with first non-orthologous sequence - M.jannaschii:268 P.indica:410

Q57725              	100.00%		G4TTB3              	100.00%
Bootstrap support for Q57725 as seed ortholog is 100%.
Bootstrap support for G4TTB3 as seed ortholog is 100%.

Group of orthologs #16. Best score 408 bits
Score difference with first non-orthologous sequence - M.jannaschii:408 P.indica:132

Q58448              	100.00%		G4TJR5              	100.00%
                    	       		G4U2F2              	58.24%
                    	       		G4TVI6              	31.30%
                    	       		G4TS48              	10.69%
Bootstrap support for Q58448 as seed ortholog is 100%.
Bootstrap support for G4TJR5 as seed ortholog is 99%.

Group of orthologs #17. Best score 406 bits
Score difference with first non-orthologous sequence - M.jannaschii:406 P.indica:406

Q58536              	100.00%		G4TEN8              	100.00%
Bootstrap support for Q58536 as seed ortholog is 100%.
Bootstrap support for G4TEN8 as seed ortholog is 100%.

Group of orthologs #18. Best score 402 bits
Score difference with first non-orthologous sequence - M.jannaschii:402 P.indica:328

Q58050              	100.00%		G4TKL1              	100.00%
Bootstrap support for Q58050 as seed ortholog is 100%.
Bootstrap support for G4TKL1 as seed ortholog is 99%.

Group of orthologs #19. Best score 389 bits
Score difference with first non-orthologous sequence - M.jannaschii:389 P.indica:281

Q58657              	100.00%		G4T548              	100.00%
Bootstrap support for Q58657 as seed ortholog is 100%.
Bootstrap support for G4T548 as seed ortholog is 100%.

Group of orthologs #20. Best score 388 bits
Score difference with first non-orthologous sequence - M.jannaschii:388 P.indica:57

Q58405              	100.00%		G4T6Y0              	100.00%
Bootstrap support for Q58405 as seed ortholog is 100%.
Bootstrap support for G4T6Y0 as seed ortholog is 92%.

Group of orthologs #21. Best score 379 bits
Score difference with first non-orthologous sequence - M.jannaschii:379 P.indica:379

Q58776              	100.00%		G4TBK0              	100.00%
Bootstrap support for Q58776 as seed ortholog is 100%.
Bootstrap support for G4TBK0 as seed ortholog is 100%.

Group of orthologs #22. Best score 371 bits
Score difference with first non-orthologous sequence - M.jannaschii:220 P.indica:33

Q58576              	100.00%		G4TV73              	100.00%
Bootstrap support for Q58576 as seed ortholog is 100%.
Bootstrap support for G4TV73 as seed ortholog is 95%.

Group of orthologs #23. Best score 346 bits
Score difference with first non-orthologous sequence - M.jannaschii:346 P.indica:346

Q58090              	100.00%		G4T9L8              	100.00%
Bootstrap support for Q58090 as seed ortholog is 100%.
Bootstrap support for G4T9L8 as seed ortholog is 100%.

Group of orthologs #24. Best score 329 bits
Score difference with first non-orthologous sequence - M.jannaschii:329 P.indica:329

Q58628              	100.00%		G4TJ80              	100.00%
Bootstrap support for Q58628 as seed ortholog is 100%.
Bootstrap support for G4TJ80 as seed ortholog is 100%.

Group of orthologs #25. Best score 321 bits
Score difference with first non-orthologous sequence - M.jannaschii:321 P.indica:321

Q58783              	100.00%		G4T616              	100.00%
Bootstrap support for Q58783 as seed ortholog is 100%.
Bootstrap support for G4T616 as seed ortholog is 100%.

Group of orthologs #26. Best score 319 bits
Score difference with first non-orthologous sequence - M.jannaschii:158 P.indica:319

Q57565              	100.00%		G4U2J0              	100.00%
Bootstrap support for Q57565 as seed ortholog is 99%.
Bootstrap support for G4U2J0 as seed ortholog is 100%.

Group of orthologs #27. Best score 307 bits
Score difference with first non-orthologous sequence - M.jannaschii:307 P.indica:88

Q58722              	100.00%		G4TH16              	100.00%
Bootstrap support for Q58722 as seed ortholog is 100%.
Bootstrap support for G4TH16 as seed ortholog is 99%.

Group of orthologs #28. Best score 305 bits
Score difference with first non-orthologous sequence - M.jannaschii:305 P.indica:2

Q59037              	100.00%		G4TNM3              	100.00%
Bootstrap support for Q59037 as seed ortholog is 100%.
Bootstrap support for G4TNM3 as seed ortholog is 99%.

Group of orthologs #29. Best score 301 bits
Score difference with first non-orthologous sequence - M.jannaschii:301 P.indica:74

Q58413              	100.00%		G4T8F3              	100.00%
Bootstrap support for Q58413 as seed ortholog is 100%.
Bootstrap support for G4T8F3 as seed ortholog is 86%.

Group of orthologs #30. Best score 294 bits
Score difference with first non-orthologous sequence - M.jannaschii:294 P.indica:130

Q58623              	100.00%		G4TLH7              	100.00%
                    	       		G4U2J8              	8.91%
Bootstrap support for Q58623 as seed ortholog is 100%.
Bootstrap support for G4TLH7 as seed ortholog is 99%.

Group of orthologs #31. Best score 293 bits
Score difference with first non-orthologous sequence - M.jannaschii:293 P.indica:293

Q58575              	100.00%		G4TDL5              	100.00%
Bootstrap support for Q58575 as seed ortholog is 100%.
Bootstrap support for G4TDL5 as seed ortholog is 100%.

Group of orthologs #32. Best score 290 bits
Score difference with first non-orthologous sequence - M.jannaschii:290 P.indica:290

Q58224              	100.00%		G4T5R2              	100.00%
Bootstrap support for Q58224 as seed ortholog is 100%.
Bootstrap support for G4T5R2 as seed ortholog is 100%.

Group of orthologs #33. Best score 289 bits
Score difference with first non-orthologous sequence - M.jannaschii:289 P.indica:289

Q59011              	100.00%		G4TX47              	100.00%
Bootstrap support for Q59011 as seed ortholog is 100%.
Bootstrap support for G4TX47 as seed ortholog is 100%.

Group of orthologs #34. Best score 286 bits
Score difference with first non-orthologous sequence - M.jannaschii:286 P.indica:226

Q58201              	100.00%		G4TD37              	100.00%
Bootstrap support for Q58201 as seed ortholog is 100%.
Bootstrap support for G4TD37 as seed ortholog is 100%.

Group of orthologs #35. Best score 285 bits
Score difference with first non-orthologous sequence - M.jannaschii:285 P.indica:285

Q58815              	100.00%		G4TJR9              	100.00%
Bootstrap support for Q58815 as seed ortholog is 100%.
Bootstrap support for G4TJR9 as seed ortholog is 100%.

Group of orthologs #36. Best score 282 bits
Score difference with first non-orthologous sequence - M.jannaschii:282 P.indica:98

Q57568              	100.00%		G4U2K2              	100.00%
Bootstrap support for Q57568 as seed ortholog is 100%.
Bootstrap support for G4U2K2 as seed ortholog is 95%.

Group of orthologs #37. Best score 280 bits
Score difference with first non-orthologous sequence - M.jannaschii:280 P.indica:280

Q57612              	100.00%		G4TT38              	100.00%
Bootstrap support for Q57612 as seed ortholog is 100%.
Bootstrap support for G4TT38 as seed ortholog is 100%.

Group of orthologs #38. Best score 279 bits
Score difference with first non-orthologous sequence - M.jannaschii:279 P.indica:279

Q58508              	100.00%		G4TIU8              	100.00%
Bootstrap support for Q58508 as seed ortholog is 100%.
Bootstrap support for G4TIU8 as seed ortholog is 100%.

Group of orthologs #39. Best score 276 bits
Score difference with first non-orthologous sequence - M.jannaschii:276 P.indica:276

Q58635              	100.00%		G4T7Q7              	100.00%
Bootstrap support for Q58635 as seed ortholog is 100%.
Bootstrap support for G4T7Q7 as seed ortholog is 100%.

Group of orthologs #40. Best score 275 bits
Score difference with first non-orthologous sequence - M.jannaschii:275 P.indica:275

Q58531              	100.00%		G4TI09              	100.00%
Bootstrap support for Q58531 as seed ortholog is 100%.
Bootstrap support for G4TI09 as seed ortholog is 100%.

Group of orthologs #41. Best score 274 bits
Score difference with first non-orthologous sequence - M.jannaschii:274 P.indica:274

Q57658              	100.00%		G4T9W6              	100.00%
Bootstrap support for Q57658 as seed ortholog is 100%.
Bootstrap support for G4T9W6 as seed ortholog is 100%.

Group of orthologs #42. Best score 274 bits
Score difference with first non-orthologous sequence - M.jannaschii:274 P.indica:156

Q58530              	100.00%		G4TWY9              	100.00%
Bootstrap support for Q58530 as seed ortholog is 100%.
Bootstrap support for G4TWY9 as seed ortholog is 99%.

Group of orthologs #43. Best score 270 bits
Score difference with first non-orthologous sequence - M.jannaschii:270 P.indica:270

Q58643              	100.00%		G4TFG8              	100.00%
Bootstrap support for Q58643 as seed ortholog is 100%.
Bootstrap support for G4TFG8 as seed ortholog is 100%.

Group of orthologs #44. Best score 268 bits
Score difference with first non-orthologous sequence - M.jannaschii:268 P.indica:268

Q60175              	100.00%		G4TBR5              	100.00%
Bootstrap support for Q60175 as seed ortholog is 100%.
Bootstrap support for G4TBR5 as seed ortholog is 100%.

Group of orthologs #45. Best score 268 bits
Score difference with first non-orthologous sequence - M.jannaschii:268 P.indica:268

Q58475              	100.00%		G4U2H2              	100.00%
Bootstrap support for Q58475 as seed ortholog is 100%.
Bootstrap support for G4U2H2 as seed ortholog is 100%.

Group of orthologs #46. Best score 262 bits
Score difference with first non-orthologous sequence - M.jannaschii:262 P.indica:133

Q58659              	100.00%		G4U2T5              	100.00%
Bootstrap support for Q58659 as seed ortholog is 100%.
Bootstrap support for G4U2T5 as seed ortholog is 99%.

Group of orthologs #47. Best score 260 bits
Score difference with first non-orthologous sequence - M.jannaschii:260 P.indica:260

Q60174              	100.00%		G4TCC1              	100.00%
Bootstrap support for Q60174 as seed ortholog is 100%.
Bootstrap support for G4TCC1 as seed ortholog is 100%.

Group of orthologs #48. Best score 256 bits
Score difference with first non-orthologous sequence - M.jannaschii:156 P.indica:30

Q58131              	100.00%		G4TUH4              	100.00%
Bootstrap support for Q58131 as seed ortholog is 99%.
Bootstrap support for G4TUH4 as seed ortholog is 75%.

Group of orthologs #49. Best score 245 bits
Score difference with first non-orthologous sequence - M.jannaschii:245 P.indica:245

Q58373              	100.00%		G4T7V7              	100.00%
Bootstrap support for Q58373 as seed ortholog is 100%.
Bootstrap support for G4T7V7 as seed ortholog is 100%.

Group of orthologs #50. Best score 245 bits
Score difference with first non-orthologous sequence - M.jannaschii:245 P.indica:245

Q57657              	100.00%		G4TAW3              	100.00%
Bootstrap support for Q57657 as seed ortholog is 100%.
Bootstrap support for G4TAW3 as seed ortholog is 100%.

Group of orthologs #51. Best score 244 bits
Score difference with first non-orthologous sequence - M.jannaschii:244 P.indica:3

Q58083              	100.00%		G4TS58              	100.00%
                    	       		G4TJ76              	19.22%
Bootstrap support for Q58083 as seed ortholog is 100%.
Bootstrap support for G4TS58 as seed ortholog is 50%.
Alternative seed ortholog is G4TI08 (3 bits away from this cluster)

Group of orthologs #52. Best score 243 bits
Score difference with first non-orthologous sequence - M.jannaschii:243 P.indica:243

Q57772              	100.00%		G4T772              	100.00%
Bootstrap support for Q57772 as seed ortholog is 100%.
Bootstrap support for G4T772 as seed ortholog is 100%.

Group of orthologs #53. Best score 242 bits
Score difference with first non-orthologous sequence - M.jannaschii:168 P.indica:200

Q49593              	100.00%		G4TB77              	100.00%
                    	       		G4TB73              	19.67%
Bootstrap support for Q49593 as seed ortholog is 100%.
Bootstrap support for G4TB77 as seed ortholog is 100%.

Group of orthologs #54. Best score 237 bits
Score difference with first non-orthologous sequence - M.jannaschii:237 P.indica:237

P81291              	100.00%		G4TCP5              	100.00%
Bootstrap support for P81291 as seed ortholog is 100%.
Bootstrap support for G4TCP5 as seed ortholog is 100%.

Group of orthologs #55. Best score 237 bits
Score difference with first non-orthologous sequence - M.jannaschii:158 P.indica:27

Q57731              	100.00%		G4THA7              	100.00%
Bootstrap support for Q57731 as seed ortholog is 100%.
Bootstrap support for G4THA7 as seed ortholog is 77%.

Group of orthologs #56. Best score 235 bits
Score difference with first non-orthologous sequence - M.jannaschii:235 P.indica:235

Q58409              	100.00%		G4TPV2              	100.00%
Bootstrap support for Q58409 as seed ortholog is 100%.
Bootstrap support for G4TPV2 as seed ortholog is 100%.

Group of orthologs #57. Best score 232 bits
Score difference with first non-orthologous sequence - M.jannaschii:114 P.indica:153

Q57911              	100.00%		G4TPT8              	100.00%
Bootstrap support for Q57911 as seed ortholog is 99%.
Bootstrap support for G4TPT8 as seed ortholog is 99%.

Group of orthologs #58. Best score 232 bits
Score difference with first non-orthologous sequence - M.jannaschii:232 P.indica:232

Q60178              	100.00%		G4U2F9              	100.00%
Bootstrap support for Q60178 as seed ortholog is 100%.
Bootstrap support for G4U2F9 as seed ortholog is 100%.

Group of orthologs #59. Best score 231 bits
Score difference with first non-orthologous sequence - M.jannaschii:231 P.indica:45

Q58950              	100.00%		G4TBU9              	100.00%
Bootstrap support for Q58950 as seed ortholog is 100%.
Bootstrap support for G4TBU9 as seed ortholog is 79%.

Group of orthologs #60. Best score 230 bits
Score difference with first non-orthologous sequence - M.jannaschii:230 P.indica:230

Q58772              	100.00%		G4TGU6              	100.00%
Bootstrap support for Q58772 as seed ortholog is 100%.
Bootstrap support for G4TGU6 as seed ortholog is 100%.

Group of orthologs #61. Best score 230 bits
Score difference with first non-orthologous sequence - M.jannaschii:230 P.indica:230

Q57645              	100.00%		G4TTK8              	100.00%
Bootstrap support for Q57645 as seed ortholog is 100%.
Bootstrap support for G4TTK8 as seed ortholog is 100%.

Group of orthologs #62. Best score 229 bits
Score difference with first non-orthologous sequence - M.jannaschii:229 P.indica:229

Q58425              	100.00%		G4TJ12              	100.00%
Bootstrap support for Q58425 as seed ortholog is 100%.
Bootstrap support for G4TJ12 as seed ortholog is 100%.

Group of orthologs #63. Best score 229 bits
Score difference with first non-orthologous sequence - M.jannaschii:229 P.indica:52

Q58806              	100.00%		G4TP08              	100.00%
Bootstrap support for Q58806 as seed ortholog is 100%.
Bootstrap support for G4TP08 as seed ortholog is 88%.

Group of orthologs #64. Best score 227 bits
Score difference with first non-orthologous sequence - M.jannaschii:227 P.indica:227

Q57663              	100.00%		G4TBX3              	100.00%
Bootstrap support for Q57663 as seed ortholog is 100%.
Bootstrap support for G4TBX3 as seed ortholog is 100%.

Group of orthologs #65. Best score 226 bits
Score difference with first non-orthologous sequence - M.jannaschii:118 P.indica:226

Q58454              	100.00%		G4TX72              	100.00%
Bootstrap support for Q58454 as seed ortholog is 99%.
Bootstrap support for G4TX72 as seed ortholog is 100%.

Group of orthologs #66. Best score 223 bits
Score difference with first non-orthologous sequence - M.jannaschii:223 P.indica:1

Q58130              	100.00%		G4TRK8              	100.00%
Q58991              	18.39%		G4T6U9              	15.10%
Bootstrap support for Q58130 as seed ortholog is 100%.
Bootstrap support for G4TRK8 as seed ortholog is 49%.
Alternative seed ortholog is G4T7E4 (1 bits away from this cluster)

Group of orthologs #67. Best score 219 bits
Score difference with first non-orthologous sequence - M.jannaschii:219 P.indica:219

Q58884              	100.00%		G4TAY5              	100.00%
Q58371              	23.91%		G4TE91              	10.02%
Q57809              	19.02%		G4TS78              	8.66%
Q60275              	7.91%		G4T6L8              	7.91%
                    	       		G4U312              	7.76%
                    	       		G4TQV3              	6.93%
Bootstrap support for Q58884 as seed ortholog is 100%.
Bootstrap support for G4TAY5 as seed ortholog is 100%.

Group of orthologs #68. Best score 219 bits
Score difference with first non-orthologous sequence - M.jannaschii:219 P.indica:219

Q58295              	100.00%		G4TE47              	100.00%
Bootstrap support for Q58295 as seed ortholog is 100%.
Bootstrap support for G4TE47 as seed ortholog is 100%.

Group of orthologs #69. Best score 216 bits
Score difference with first non-orthologous sequence - M.jannaschii:216 P.indica:216

Q58239              	100.00%		G4T6E6              	100.00%
Bootstrap support for Q58239 as seed ortholog is 100%.
Bootstrap support for G4T6E6 as seed ortholog is 100%.

Group of orthologs #70. Best score 213 bits
Score difference with first non-orthologous sequence - M.jannaschii:213 P.indica:213

Q58058              	100.00%		G4TEE4              	100.00%
Bootstrap support for Q58058 as seed ortholog is 100%.
Bootstrap support for G4TEE4 as seed ortholog is 100%.

Group of orthologs #71. Best score 212 bits
Score difference with first non-orthologous sequence - M.jannaschii:212 P.indica:212

Q58374              	100.00%		G4TCY0              	100.00%
Bootstrap support for Q58374 as seed ortholog is 100%.
Bootstrap support for G4TCY0 as seed ortholog is 100%.

Group of orthologs #72. Best score 211 bits
Score difference with first non-orthologous sequence - M.jannaschii:211 P.indica:211

P54017              	100.00%		G4TVC2              	100.00%
Bootstrap support for P54017 as seed ortholog is 100%.
Bootstrap support for G4TVC2 as seed ortholog is 100%.

Group of orthologs #73. Best score 208 bits
Score difference with first non-orthologous sequence - M.jannaschii:208 P.indica:208

Q57984              	100.00%		G4TN57              	100.00%
Bootstrap support for Q57984 as seed ortholog is 100%.
Bootstrap support for G4TN57 as seed ortholog is 100%.

Group of orthologs #74. Best score 207 bits
Score difference with first non-orthologous sequence - M.jannaschii:207 P.indica:207

Q58542              	100.00%		G4TPP3              	100.00%
Bootstrap support for Q58542 as seed ortholog is 100%.
Bootstrap support for G4TPP3 as seed ortholog is 100%.

Group of orthologs #75. Best score 206 bits
Score difference with first non-orthologous sequence - M.jannaschii:206 P.indica:206

Q57991              	100.00%		G4TDZ0              	100.00%
Bootstrap support for Q57991 as seed ortholog is 100%.
Bootstrap support for G4TDZ0 as seed ortholog is 100%.

Group of orthologs #76. Best score 205 bits
Score difference with first non-orthologous sequence - M.jannaschii:205 P.indica:205

Q57635              	100.00%		G4TMD0              	100.00%
                    	       		G4TFE8              	10.80%
Bootstrap support for Q57635 as seed ortholog is 100%.
Bootstrap support for G4TMD0 as seed ortholog is 100%.

Group of orthologs #77. Best score 204 bits
Score difference with first non-orthologous sequence - M.jannaschii:204 P.indica:204

P54014              	100.00%		G4U3C8              	100.00%
Bootstrap support for P54014 as seed ortholog is 100%.
Bootstrap support for G4U3C8 as seed ortholog is 100%.

Group of orthologs #78. Best score 202 bits
Score difference with first non-orthologous sequence - M.jannaschii:202 P.indica:202

Q57572              	100.00%		G4TCV2              	100.00%
Bootstrap support for Q57572 as seed ortholog is 100%.
Bootstrap support for G4TCV2 as seed ortholog is 100%.

Group of orthologs #79. Best score 199 bits
Score difference with first non-orthologous sequence - M.jannaschii:199 P.indica:199

Q59046              	100.00%		G4TIC8              	100.00%
Bootstrap support for Q59046 as seed ortholog is 100%.
Bootstrap support for G4TIC8 as seed ortholog is 100%.

Group of orthologs #80. Best score 197 bits
Score difference with first non-orthologous sequence - M.jannaschii:197 P.indica:15

Q60177              	100.00%		G4TAT5              	100.00%
Bootstrap support for Q60177 as seed ortholog is 100%.
Bootstrap support for G4TAT5 as seed ortholog is 69%.
Alternative seed ortholog is G4TAR2 (15 bits away from this cluster)

Group of orthologs #81. Best score 196 bits
Score difference with first non-orthologous sequence - M.jannaschii:196 P.indica:137

Q58787              	100.00%		G4TJ09              	100.00%
Q58595              	40.61%		
Q57926              	23.15%		
Bootstrap support for Q58787 as seed ortholog is 100%.
Bootstrap support for G4TJ09 as seed ortholog is 99%.

Group of orthologs #82. Best score 193 bits
Score difference with first non-orthologous sequence - M.jannaschii:193 P.indica:193

Q58992              	100.00%		G4U2M1              	100.00%
Bootstrap support for Q58992 as seed ortholog is 100%.
Bootstrap support for G4U2M1 as seed ortholog is 100%.

Group of orthologs #83. Best score 191 bits
Score difference with first non-orthologous sequence - M.jannaschii:191 P.indica:191

Q58839              	100.00%		G4T920              	100.00%
Bootstrap support for Q58839 as seed ortholog is 100%.
Bootstrap support for G4T920 as seed ortholog is 100%.

Group of orthologs #84. Best score 189 bits
Score difference with first non-orthologous sequence - M.jannaschii:189 P.indica:124

Q60335              	100.00%		G4TE20              	100.00%
Bootstrap support for Q60335 as seed ortholog is 100%.
Bootstrap support for G4TE20 as seed ortholog is 99%.

Group of orthologs #85. Best score 187 bits
Score difference with first non-orthologous sequence - M.jannaschii:187 P.indica:111

Q58900              	100.00%		G4TFT4              	100.00%
Bootstrap support for Q58900 as seed ortholog is 100%.
Bootstrap support for G4TFT4 as seed ortholog is 99%.

Group of orthologs #86. Best score 186 bits
Score difference with first non-orthologous sequence - M.jannaschii:186 P.indica:186

Q58347              	100.00%		G4T9P8              	100.00%
Bootstrap support for Q58347 as seed ortholog is 100%.
Bootstrap support for G4T9P8 as seed ortholog is 100%.

Group of orthologs #87. Best score 185 bits
Score difference with first non-orthologous sequence - M.jannaschii:185 P.indica:185

P54063              	100.00%		G4TGK2              	100.00%
Bootstrap support for P54063 as seed ortholog is 100%.
Bootstrap support for G4TGK2 as seed ortholog is 100%.

Group of orthologs #88. Best score 184 bits
Score difference with first non-orthologous sequence - M.jannaschii:184 P.indica:54

Q58105              	100.00%		G4TS99              	100.00%
                    	       		G4TIV1              	16.35%
Bootstrap support for Q58105 as seed ortholog is 100%.
Bootstrap support for G4TS99 as seed ortholog is 95%.

Group of orthologs #89. Best score 184 bits
Score difference with first non-orthologous sequence - M.jannaschii:121 P.indica:184

Q58291              	100.00%		G4TF11              	100.00%
Bootstrap support for Q58291 as seed ortholog is 99%.
Bootstrap support for G4TF11 as seed ortholog is 100%.

Group of orthologs #90. Best score 183 bits
Score difference with first non-orthologous sequence - M.jannaschii:183 P.indica:183

Q58633              	100.00%		G4TK05              	100.00%
Q57626              	10.59%		
Bootstrap support for Q58633 as seed ortholog is 100%.
Bootstrap support for G4TK05 as seed ortholog is 100%.

Group of orthologs #91. Best score 183 bits
Score difference with first non-orthologous sequence - M.jannaschii:183 P.indica:47

Q58424              	100.00%		G4TWS4              	100.00%
Bootstrap support for Q58424 as seed ortholog is 100%.
Bootstrap support for G4TWS4 as seed ortholog is 92%.

Group of orthologs #92. Best score 182 bits
Score difference with first non-orthologous sequence - M.jannaschii:182 P.indica:182

Q58938              	100.00%		G4TPU3              	100.00%
Bootstrap support for Q58938 as seed ortholog is 100%.
Bootstrap support for G4TPU3 as seed ortholog is 100%.

Group of orthologs #93. Best score 177 bits
Score difference with first non-orthologous sequence - M.jannaschii:177 P.indica:177

Q58108              	100.00%		G4T888              	100.00%
Bootstrap support for Q58108 as seed ortholog is 100%.
Bootstrap support for G4T888 as seed ortholog is 100%.

Group of orthologs #94. Best score 173 bits
Score difference with first non-orthologous sequence - M.jannaschii:173 P.indica:173

P54060              	100.00%		G4TV08              	100.00%
Bootstrap support for P54060 as seed ortholog is 100%.
Bootstrap support for G4TV08 as seed ortholog is 100%.

Group of orthologs #95. Best score 171 bits
Score difference with first non-orthologous sequence - M.jannaschii:171 P.indica:171

Q57624              	100.00%		G4TFY2              	100.00%
Bootstrap support for Q57624 as seed ortholog is 100%.
Bootstrap support for G4TFY2 as seed ortholog is 100%.

Group of orthologs #96. Best score 164 bits
Score difference with first non-orthologous sequence - M.jannaschii:164 P.indica:164

Q57854              	100.00%		G4TWS5              	100.00%
Bootstrap support for Q57854 as seed ortholog is 100%.
Bootstrap support for G4TWS5 as seed ortholog is 100%.

Group of orthologs #97. Best score 161 bits
Score difference with first non-orthologous sequence - M.jannaschii:161 P.indica:161

P54015              	100.00%		G4TS25              	100.00%
Bootstrap support for P54015 as seed ortholog is 100%.
Bootstrap support for G4TS25 as seed ortholog is 100%.

Group of orthologs #98. Best score 161 bits
Score difference with first non-orthologous sequence - M.jannaschii:161 P.indica:161

Q57686              	100.00%		G4TS92              	100.00%
Bootstrap support for Q57686 as seed ortholog is 100%.
Bootstrap support for G4TS92 as seed ortholog is 100%.

Group of orthologs #99. Best score 160 bits
Score difference with first non-orthologous sequence - M.jannaschii:23 P.indica:160

Q58558              	100.00%		G4TUB7              	100.00%
Bootstrap support for Q58558 as seed ortholog is 74%.
Alternative seed ortholog is Q58873 (23 bits away from this cluster)
Bootstrap support for G4TUB7 as seed ortholog is 100%.

Group of orthologs #100. Best score 159 bits
Score difference with first non-orthologous sequence - M.jannaschii:159 P.indica:12

Q59050              	100.00%		G4TPW4              	100.00%
Bootstrap support for Q59050 as seed ortholog is 100%.
Bootstrap support for G4TPW4 as seed ortholog is 66%.
Alternative seed ortholog is G4TF78 (12 bits away from this cluster)

Group of orthologs #101. Best score 158 bits
Score difference with first non-orthologous sequence - M.jannaschii:158 P.indica:158

Q58767              	100.00%		G4TVH3              	100.00%
Bootstrap support for Q58767 as seed ortholog is 100%.
Bootstrap support for G4TVH3 as seed ortholog is 100%.

Group of orthologs #102. Best score 156 bits
Score difference with first non-orthologous sequence - M.jannaschii:156 P.indica:156

P54045              	100.00%		G4TEF5              	100.00%
Bootstrap support for P54045 as seed ortholog is 100%.
Bootstrap support for G4TEF5 as seed ortholog is 100%.

Group of orthologs #103. Best score 155 bits
Score difference with first non-orthologous sequence - M.jannaschii:155 P.indica:3

Q58694              	100.00%		G4T728              	100.00%
Bootstrap support for Q58694 as seed ortholog is 100%.
Bootstrap support for G4T728 as seed ortholog is 50%.
Alternative seed ortholog is G4T7C1 (3 bits away from this cluster)

Group of orthologs #104. Best score 152 bits
Score difference with first non-orthologous sequence - M.jannaschii:152 P.indica:152

P54040              	100.00%		G4T5X4              	100.00%
Bootstrap support for P54040 as seed ortholog is 100%.
Bootstrap support for G4T5X4 as seed ortholog is 100%.

Group of orthologs #105. Best score 152 bits
Score difference with first non-orthologous sequence - M.jannaschii:152 P.indica:152

Q57981              	100.00%		G4TU02              	100.00%
Bootstrap support for Q57981 as seed ortholog is 100%.
Bootstrap support for G4TU02 as seed ortholog is 100%.

Group of orthologs #106. Best score 152 bits
Score difference with first non-orthologous sequence - M.jannaschii:152 P.indica:152

Q58473              	100.00%		G4U2L0              	100.00%
Bootstrap support for Q58473 as seed ortholog is 100%.
Bootstrap support for G4U2L0 as seed ortholog is 100%.

Group of orthologs #107. Best score 151 bits
Score difference with first non-orthologous sequence - M.jannaschii:151 P.indica:151

Q58369              	100.00%		G4TK04              	100.00%
Bootstrap support for Q58369 as seed ortholog is 100%.
Bootstrap support for G4TK04 as seed ortholog is 100%.

Group of orthologs #108. Best score 151 bits
Score difference with first non-orthologous sequence - M.jannaschii:151 P.indica:97

Q58725              	100.00%		G4TT63              	100.00%
Bootstrap support for Q58725 as seed ortholog is 100%.
Bootstrap support for G4TT63 as seed ortholog is 99%.

Group of orthologs #109. Best score 149 bits
Score difference with first non-orthologous sequence - M.jannaschii:149 P.indica:149

P54109              	100.00%		G4TGV4              	100.00%
Bootstrap support for P54109 as seed ortholog is 100%.
Bootstrap support for G4TGV4 as seed ortholog is 100%.

Group of orthologs #110. Best score 149 bits
Score difference with first non-orthologous sequence - M.jannaschii:149 P.indica:81

Q58339              	100.00%		G4TUX5              	100.00%
Bootstrap support for Q58339 as seed ortholog is 100%.
Bootstrap support for G4TUX5 as seed ortholog is 98%.

Group of orthologs #111. Best score 148 bits
Score difference with first non-orthologous sequence - M.jannaschii:148 P.indica:98

Q58810              	100.00%		G4TEV1              	100.00%
Bootstrap support for Q58810 as seed ortholog is 100%.
Bootstrap support for G4TEV1 as seed ortholog is 99%.

Group of orthologs #112. Best score 147 bits
Score difference with first non-orthologous sequence - M.jannaschii:59 P.indica:68

Q60317              	100.00%		G4TK64              	100.00%
Q58097              	21.95%		
Bootstrap support for Q60317 as seed ortholog is 95%.
Bootstrap support for G4TK64 as seed ortholog is 95%.

Group of orthologs #113. Best score 147 bits
Score difference with first non-orthologous sequence - M.jannaschii:147 P.indica:96

P54062              	100.00%		G4TBG2              	100.00%
Bootstrap support for P54062 as seed ortholog is 100%.
Bootstrap support for G4TBG2 as seed ortholog is 100%.

Group of orthologs #114. Best score 146 bits
Score difference with first non-orthologous sequence - M.jannaschii:146 P.indica:146

P54021              	100.00%		G4TYQ6              	100.00%
                    	       		G4TW72              	25.16%
Bootstrap support for P54021 as seed ortholog is 100%.
Bootstrap support for G4TYQ6 as seed ortholog is 100%.

Group of orthologs #115. Best score 145 bits
Score difference with first non-orthologous sequence - M.jannaschii:145 P.indica:145

Q58109              	100.00%		G4T694              	100.00%
Bootstrap support for Q58109 as seed ortholog is 100%.
Bootstrap support for G4T694 as seed ortholog is 100%.

Group of orthologs #116. Best score 144 bits
Score difference with first non-orthologous sequence - M.jannaschii:144 P.indica:144

Q58095              	100.00%		G4TEM4              	100.00%
Bootstrap support for Q58095 as seed ortholog is 100%.
Bootstrap support for G4TEM4 as seed ortholog is 100%.

Group of orthologs #117. Best score 144 bits
Score difference with first non-orthologous sequence - M.jannaschii:144 P.indica:144

Q58670              	100.00%		G4TGT2              	100.00%
Bootstrap support for Q58670 as seed ortholog is 100%.
Bootstrap support for G4TGT2 as seed ortholog is 100%.

Group of orthologs #118. Best score 144 bits
Score difference with first non-orthologous sequence - M.jannaschii:144 P.indica:144

P54039              	100.00%		G4TM84              	100.00%
Bootstrap support for P54039 as seed ortholog is 100%.
Bootstrap support for G4TM84 as seed ortholog is 100%.

Group of orthologs #119. Best score 143 bits
Score difference with first non-orthologous sequence - M.jannaschii:143 P.indica:143

Q58661              	100.00%		G4T6G1              	100.00%
Bootstrap support for Q58661 as seed ortholog is 100%.
Bootstrap support for G4T6G1 as seed ortholog is 100%.

Group of orthologs #120. Best score 143 bits
Score difference with first non-orthologous sequence - M.jannaschii:143 P.indica:143

Q58601              	100.00%		G4THL1              	100.00%
Bootstrap support for Q58601 as seed ortholog is 100%.
Bootstrap support for G4THL1 as seed ortholog is 100%.

Group of orthologs #121. Best score 142 bits
Score difference with first non-orthologous sequence - M.jannaschii:142 P.indica:142

Q57689              	100.00%		G4TU70              	100.00%
Bootstrap support for Q57689 as seed ortholog is 100%.
Bootstrap support for G4TU70 as seed ortholog is 100%.

Group of orthologs #122. Best score 139 bits
Score difference with first non-orthologous sequence - M.jannaschii:139 P.indica:139

Q57989              	100.00%		G4TPN3              	100.00%
Bootstrap support for Q57989 as seed ortholog is 100%.
Bootstrap support for G4TPN3 as seed ortholog is 100%.

Group of orthologs #123. Best score 137 bits
Score difference with first non-orthologous sequence - M.jannaschii:137 P.indica:93

P54049              	100.00%		G4T6X4              	100.00%
Bootstrap support for P54049 as seed ortholog is 100%.
Bootstrap support for G4T6X4 as seed ortholog is 99%.

Group of orthologs #124. Best score 137 bits
Score difference with first non-orthologous sequence - M.jannaschii:137 P.indica:137

Q58093              	100.00%		G4TCV3              	100.00%
Bootstrap support for Q58093 as seed ortholog is 100%.
Bootstrap support for G4TCV3 as seed ortholog is 100%.

Group of orthologs #125. Best score 137 bits
Score difference with first non-orthologous sequence - M.jannaschii:137 P.indica:137

Q57625              	100.00%		G4TMR6              	100.00%
Bootstrap support for Q57625 as seed ortholog is 100%.
Bootstrap support for G4TMR6 as seed ortholog is 100%.

Group of orthologs #126. Best score 137 bits
Score difference with first non-orthologous sequence - M.jannaschii:137 P.indica:137

P54012              	100.00%		G4TU97              	100.00%
Bootstrap support for P54012 as seed ortholog is 100%.
Bootstrap support for G4TU97 as seed ortholog is 100%.

Group of orthologs #127. Best score 134 bits
Score difference with first non-orthologous sequence - M.jannaschii:134 P.indica:134

P54018              	100.00%		G4T638              	100.00%
Bootstrap support for P54018 as seed ortholog is 100%.
Bootstrap support for G4T638 as seed ortholog is 100%.

Group of orthologs #128. Best score 134 bits
Score difference with first non-orthologous sequence - M.jannaschii:134 P.indica:19

Q57586              	100.00%		G4T6J9              	100.00%
Bootstrap support for Q57586 as seed ortholog is 100%.
Bootstrap support for G4T6J9 as seed ortholog is 69%.
Alternative seed ortholog is G4T6S8 (19 bits away from this cluster)

Group of orthologs #129. Best score 132 bits
Score difference with first non-orthologous sequence - M.jannaschii:132 P.indica:132

Q57834              	100.00%		G4TEW8              	100.00%
Bootstrap support for Q57834 as seed ortholog is 100%.
Bootstrap support for G4TEW8 as seed ortholog is 100%.

Group of orthologs #130. Best score 132 bits
Score difference with first non-orthologous sequence - M.jannaschii:132 P.indica:132

Q57963              	100.00%		G4TN98              	100.00%
Bootstrap support for Q57963 as seed ortholog is 100%.
Bootstrap support for G4TN98 as seed ortholog is 100%.

Group of orthologs #131. Best score 131 bits
Score difference with first non-orthologous sequence - M.jannaschii:131 P.indica:131

Q58296              	100.00%		G4TRL2              	100.00%
Q58080              	11.20%		
Bootstrap support for Q58296 as seed ortholog is 100%.
Bootstrap support for G4TRL2 as seed ortholog is 100%.

Group of orthologs #132. Best score 131 bits
Score difference with first non-orthologous sequence - M.jannaschii:131 P.indica:131

Q58406              	100.00%		G4TQT0              	100.00%
Bootstrap support for Q58406 as seed ortholog is 100%.
Bootstrap support for G4TQT0 as seed ortholog is 100%.

Group of orthologs #133. Best score 131 bits
Score difference with first non-orthologous sequence - M.jannaschii:131 P.indica:131

Q58086              	100.00%		G4TSG6              	100.00%
Bootstrap support for Q58086 as seed ortholog is 100%.
Bootstrap support for G4TSG6 as seed ortholog is 100%.

Group of orthologs #134. Best score 130 bits
Score difference with first non-orthologous sequence - M.jannaschii:130 P.indica:130

Q58146              	100.00%		G4TBW7              	100.00%
Bootstrap support for Q58146 as seed ortholog is 100%.
Bootstrap support for G4TBW7 as seed ortholog is 100%.

Group of orthologs #135. Best score 129 bits
Score difference with first non-orthologous sequence - M.jannaschii:129 P.indica:129

Q57916              	100.00%		G4TZ15              	100.00%
Bootstrap support for Q57916 as seed ortholog is 100%.
Bootstrap support for G4TZ15 as seed ortholog is 100%.

Group of orthologs #136. Best score 126 bits
Score difference with first non-orthologous sequence - M.jannaschii:126 P.indica:21

Q58560              	100.00%		G4TGJ7              	100.00%
                    	       		G4T8Y9              	10.34%
                    	       		G4TDN2              	8.73%
Bootstrap support for Q58560 as seed ortholog is 100%.
Bootstrap support for G4TGJ7 as seed ortholog is 64%.
Alternative seed ortholog is G4TUQ4 (21 bits away from this cluster)

Group of orthologs #137. Best score 126 bits
Score difference with first non-orthologous sequence - M.jannaschii:126 P.indica:126

Q57930              	100.00%		G4T6E4              	100.00%
Bootstrap support for Q57930 as seed ortholog is 100%.
Bootstrap support for G4T6E4 as seed ortholog is 100%.

Group of orthologs #138. Best score 126 bits
Score difference with first non-orthologous sequence - M.jannaschii:126 P.indica:126

Q58998              	100.00%		G4TJ54              	100.00%
Bootstrap support for Q58998 as seed ortholog is 100%.
Bootstrap support for G4TJ54 as seed ortholog is 100%.

Group of orthologs #139. Best score 125 bits
Score difference with first non-orthologous sequence - M.jannaschii:125 P.indica:125

Q57935              	100.00%		G4TFQ7              	100.00%
Q58433              	14.20%		
Bootstrap support for Q57935 as seed ortholog is 100%.
Bootstrap support for G4TFQ7 as seed ortholog is 100%.

Group of orthologs #140. Best score 125 bits
Score difference with first non-orthologous sequence - M.jannaschii:125 P.indica:29

Q57664              	100.00%		G4TIU4              	100.00%
Q58455              	8.32%		
Bootstrap support for Q57664 as seed ortholog is 100%.
Bootstrap support for G4TIU4 as seed ortholog is 74%.
Alternative seed ortholog is G4TA87 (29 bits away from this cluster)

Group of orthologs #141. Best score 124 bits
Score difference with first non-orthologous sequence - M.jannaschii:124 P.indica:68

Q57757              	100.00%		G4TPM6              	100.00%
Bootstrap support for Q57757 as seed ortholog is 100%.
Bootstrap support for G4TPM6 as seed ortholog is 95%.

Group of orthologs #142. Best score 124 bits
Score difference with first non-orthologous sequence - M.jannaschii:124 P.indica:124

P54041              	100.00%		G4U2I7              	100.00%
Bootstrap support for P54041 as seed ortholog is 100%.
Bootstrap support for G4U2I7 as seed ortholog is 100%.

Group of orthologs #143. Best score 123 bits
Score difference with first non-orthologous sequence - M.jannaschii:123 P.indica:123

P54034              	100.00%		G4TLL1              	100.00%
Bootstrap support for P54034 as seed ortholog is 100%.
Bootstrap support for G4TLL1 as seed ortholog is 100%.

Group of orthologs #144. Best score 123 bits
Score difference with first non-orthologous sequence - M.jannaschii:123 P.indica:123

Q58881              	100.00%		G4TPA6              	100.00%
Bootstrap support for Q58881 as seed ortholog is 100%.
Bootstrap support for G4TPA6 as seed ortholog is 100%.

Group of orthologs #145. Best score 122 bits
Score difference with first non-orthologous sequence - M.jannaschii:122 P.indica:73

P54037              	100.00%		G4T7X3              	100.00%
Bootstrap support for P54037 as seed ortholog is 100%.
Bootstrap support for G4T7X3 as seed ortholog is 99%.

Group of orthologs #146. Best score 121 bits
Score difference with first non-orthologous sequence - M.jannaschii:121 P.indica:121

Q58032              	100.00%		G4TEX0              	100.00%
Bootstrap support for Q58032 as seed ortholog is 100%.
Bootstrap support for G4TEX0 as seed ortholog is 100%.

Group of orthologs #147. Best score 120 bits
Score difference with first non-orthologous sequence - M.jannaschii:120 P.indica:4

Q58639              	100.00%		G4TRG4              	100.00%
Q59056              	100.00%		G4T756              	100.00%
                    	       		G4TB09              	26.53%
                    	       		G4TVB5              	19.24%
Bootstrap support for Q58639 as seed ortholog is 100%.
Bootstrap support for Q59056 as seed ortholog is 100%.
Bootstrap support for G4TRG4 as seed ortholog is 50%.
Alternative seed ortholog is G4TQC1 (4 bits away from this cluster)
Bootstrap support for G4T756 as seed ortholog is 67%.
Alternative seed ortholog is G4TQC1 (4 bits away from this cluster)

Group of orthologs #148. Best score 120 bits
Score difference with first non-orthologous sequence - M.jannaschii:120 P.indica:120

Q57955              	100.00%		G4TH13              	100.00%
Bootstrap support for Q57955 as seed ortholog is 100%.
Bootstrap support for G4TH13 as seed ortholog is 100%.

Group of orthologs #149. Best score 119 bits
Score difference with first non-orthologous sequence - M.jannaschii:119 P.indica:64

P54020              	100.00%		G4T9D3              	100.00%
Bootstrap support for P54020 as seed ortholog is 100%.
Bootstrap support for G4T9D3 as seed ortholog is 99%.

Group of orthologs #150. Best score 118 bits
Score difference with first non-orthologous sequence - M.jannaschii:47 P.indica:118

Q58692              	100.00%		G4TBZ9              	100.00%
Bootstrap support for Q58692 as seed ortholog is 88%.
Bootstrap support for G4TBZ9 as seed ortholog is 100%.

Group of orthologs #151. Best score 118 bits
Score difference with first non-orthologous sequence - M.jannaschii:118 P.indica:22

Q58128              	100.00%		G4TPB3              	100.00%
Bootstrap support for Q58128 as seed ortholog is 100%.
Bootstrap support for G4TPB3 as seed ortholog is 71%.
Alternative seed ortholog is G4U398 (22 bits away from this cluster)

Group of orthologs #152. Best score 118 bits
Score difference with first non-orthologous sequence - M.jannaschii:118 P.indica:118

P54044              	100.00%		G4TS36              	100.00%
Bootstrap support for P54044 as seed ortholog is 100%.
Bootstrap support for G4TS36 as seed ortholog is 100%.

Group of orthologs #153. Best score 117 bits
Score difference with first non-orthologous sequence - M.jannaschii:117 P.indica:117

Q58796              	100.00%		G4TH50              	100.00%
                    	       		G4TBP7              	23.04%
Bootstrap support for Q58796 as seed ortholog is 100%.
Bootstrap support for G4TH50 as seed ortholog is 100%.

Group of orthologs #154. Best score 117 bits
Score difference with first non-orthologous sequence - M.jannaschii:117 P.indica:117

Q58660              	100.00%		G4T514              	100.00%
Bootstrap support for Q58660 as seed ortholog is 100%.
Bootstrap support for G4T514 as seed ortholog is 100%.

Group of orthologs #155. Best score 113 bits
Score difference with first non-orthologous sequence - M.jannaschii:113 P.indica:113

Q60366              	100.00%		G4TGJ1              	100.00%
Q58739              	100.00%		G4TA20              	100.00%
Bootstrap support for Q60366 as seed ortholog is 100%.
Bootstrap support for Q58739 as seed ortholog is 100%.
Bootstrap support for G4TGJ1 as seed ortholog is 100%.
Bootstrap support for G4TA20 as seed ortholog is 100%.

Group of orthologs #156. Best score 113 bits
Score difference with first non-orthologous sequence - M.jannaschii:113 P.indica:113

Q58365              	100.00%		G4T631              	100.00%
Bootstrap support for Q58365 as seed ortholog is 100%.
Bootstrap support for G4T631 as seed ortholog is 100%.

Group of orthologs #157. Best score 113 bits
Score difference with first non-orthologous sequence - M.jannaschii:113 P.indica:113

P54019              	100.00%		G4TB15              	100.00%
Bootstrap support for P54019 as seed ortholog is 100%.
Bootstrap support for G4TB15 as seed ortholog is 100%.

Group of orthologs #158. Best score 113 bits
Score difference with first non-orthologous sequence - M.jannaschii:113 P.indica:113

Q58435              	100.00%		G4TTZ2              	100.00%
Bootstrap support for Q58435 as seed ortholog is 100%.
Bootstrap support for G4TTZ2 as seed ortholog is 100%.

Group of orthologs #159. Best score 112 bits
Score difference with first non-orthologous sequence - M.jannaschii:112 P.indica:15

Q58859              	100.00%		G4TQ46              	100.00%
                    	       		G4TQN9              	5.07%
Bootstrap support for Q58859 as seed ortholog is 100%.
Bootstrap support for G4TQ46 as seed ortholog is 70%.
Alternative seed ortholog is G4T8C2 (15 bits away from this cluster)

Group of orthologs #160. Best score 112 bits
Score difference with first non-orthologous sequence - M.jannaschii:112 P.indica:112

Q58597              	100.00%		G4TRB3              	100.00%
Bootstrap support for Q58597 as seed ortholog is 100%.
Bootstrap support for G4TRB3 as seed ortholog is 100%.

Group of orthologs #161. Best score 110 bits
Score difference with first non-orthologous sequence - M.jannaschii:110 P.indica:110

Q60356              	100.00%		G4TTS6              	100.00%
Bootstrap support for Q60356 as seed ortholog is 100%.
Bootstrap support for G4TTS6 as seed ortholog is 100%.

Group of orthologs #162. Best score 109 bits
Score difference with first non-orthologous sequence - M.jannaschii:109 P.indica:51

Q58931              	100.00%		G4TUZ6              	100.00%
Bootstrap support for Q58931 as seed ortholog is 100%.
Bootstrap support for G4TUZ6 as seed ortholog is 85%.

Group of orthologs #163. Best score 108 bits
Score difference with first non-orthologous sequence - M.jannaschii:108 P.indica:21

Q58705              	100.00%		G4U3E4              	100.00%
Bootstrap support for Q58705 as seed ortholog is 100%.
Bootstrap support for G4U3E4 as seed ortholog is 35%.
Alternative seed ortholog is G4U3F8 (21 bits away from this cluster)

Group of orthologs #164. Best score 107 bits
Score difference with first non-orthologous sequence - M.jannaschii:107 P.indica:107

Q57996              	100.00%		G4T8F2              	100.00%
Q58172              	81.52%		
Bootstrap support for Q57996 as seed ortholog is 100%.
Bootstrap support for G4T8F2 as seed ortholog is 100%.

Group of orthologs #165. Best score 106 bits
Score difference with first non-orthologous sequence - M.jannaschii:106 P.indica:106

P54043              	100.00%		G4TRC3              	100.00%
Bootstrap support for P54043 as seed ortholog is 100%.
Bootstrap support for G4TRC3 as seed ortholog is 100%.

Group of orthologs #166. Best score 105 bits
Score difference with first non-orthologous sequence - M.jannaschii:105 P.indica:105

Q57581              	100.00%		G4T7Q0              	100.00%
Bootstrap support for Q57581 as seed ortholog is 100%.
Bootstrap support for G4T7Q0 as seed ortholog is 100%.

Group of orthologs #167. Best score 105 bits
Score difference with first non-orthologous sequence - M.jannaschii:105 P.indica:105

Q60357              	100.00%		G4T5R8              	100.00%
Bootstrap support for Q60357 as seed ortholog is 100%.
Bootstrap support for G4T5R8 as seed ortholog is 100%.

Group of orthologs #168. Best score 104 bits
Score difference with first non-orthologous sequence - M.jannaschii:104 P.indica:18

Q58270              	100.00%		G4TEU3              	100.00%
Bootstrap support for Q58270 as seed ortholog is 100%.
Bootstrap support for G4TEU3 as seed ortholog is 69%.
Alternative seed ortholog is G4TC84 (18 bits away from this cluster)

Group of orthologs #169. Best score 103 bits
Score difference with first non-orthologous sequence - M.jannaschii:103 P.indica:103

Q60363              	100.00%		G4TFH7              	100.00%
Bootstrap support for Q60363 as seed ortholog is 100%.
Bootstrap support for G4TFH7 as seed ortholog is 100%.

Group of orthologs #170. Best score 102 bits
Score difference with first non-orthologous sequence - M.jannaschii:102 P.indica:102

Q58118              	100.00%		G4T893              	100.00%
Bootstrap support for Q58118 as seed ortholog is 100%.
Bootstrap support for G4T893 as seed ortholog is 100%.

Group of orthologs #171. Best score 102 bits
Score difference with first non-orthologous sequence - M.jannaschii:102 P.indica:102

Q60358              	100.00%		G4TBD6              	100.00%
Bootstrap support for Q60358 as seed ortholog is 100%.
Bootstrap support for G4TBD6 as seed ortholog is 100%.

Group of orthologs #172. Best score 102 bits
Score difference with first non-orthologous sequence - M.jannaschii:102 P.indica:102

P54057              	100.00%		G4TG83              	100.00%
Bootstrap support for P54057 as seed ortholog is 100%.
Bootstrap support for G4TG83 as seed ortholog is 100%.

Group of orthologs #173. Best score 100 bits
Score difference with first non-orthologous sequence - M.jannaschii:100 P.indica:28

Q58216              	100.00%		G4TUV1              	100.00%
Bootstrap support for Q58216 as seed ortholog is 100%.
Bootstrap support for G4TUV1 as seed ortholog is 77%.

Group of orthologs #174. Best score 99 bits
Score difference with first non-orthologous sequence - M.jannaschii:99 P.indica:99

Q58936              	100.00%		G4TTY7              	100.00%
Bootstrap support for Q58936 as seed ortholog is 100%.
Bootstrap support for G4TTY7 as seed ortholog is 100%.

Group of orthologs #175. Best score 98 bits
Score difference with first non-orthologous sequence - M.jannaschii:98 P.indica:98

Q58761              	100.00%		G4TZA1              	100.00%
                    	       		G4TWJ8              	35.20%
Bootstrap support for Q58761 as seed ortholog is 100%.
Bootstrap support for G4TZA1 as seed ortholog is 100%.

Group of orthologs #176. Best score 97 bits
Score difference with first non-orthologous sequence - M.jannaschii:97 P.indica:97

P54024              	100.00%		G4TB80              	100.00%
Bootstrap support for P54024 as seed ortholog is 100%.
Bootstrap support for G4TB80 as seed ortholog is 100%.

Group of orthologs #177. Best score 97 bits
Score difference with first non-orthologous sequence - M.jannaschii:97 P.indica:13

Q58634              	100.00%		G4TAX1              	100.00%
Bootstrap support for Q58634 as seed ortholog is 100%.
Bootstrap support for G4TAX1 as seed ortholog is 70%.
Alternative seed ortholog is G4TAD3 (13 bits away from this cluster)

Group of orthologs #178. Best score 97 bits
Score difference with first non-orthologous sequence - M.jannaschii:97 P.indica:97

P54042              	100.00%		G4TGM8              	100.00%
Bootstrap support for P54042 as seed ortholog is 100%.
Bootstrap support for G4TGM8 as seed ortholog is 100%.

Group of orthologs #179. Best score 97 bits
Score difference with first non-orthologous sequence - M.jannaschii:97 P.indica:97

Q57675              	100.00%		G4TM54              	100.00%
Bootstrap support for Q57675 as seed ortholog is 100%.
Bootstrap support for G4TM54 as seed ortholog is 100%.

Group of orthologs #180. Best score 96 bits
Score difference with first non-orthologous sequence - M.jannaschii:96 P.indica:96

Q59000              	100.00%		G4TTS3              	100.00%
Bootstrap support for Q59000 as seed ortholog is 100%.
Bootstrap support for G4TTS3 as seed ortholog is 100%.

Group of orthologs #181. Best score 95 bits
Score difference with first non-orthologous sequence - M.jannaschii:95 P.indica:95

Q57636              	100.00%		G4TUU5              	100.00%
Bootstrap support for Q57636 as seed ortholog is 100%.
Bootstrap support for G4TUU5 as seed ortholog is 100%.

Group of orthologs #182. Best score 94 bits
Score difference with first non-orthologous sequence - M.jannaschii:94 P.indica:94

Q57936              	100.00%		G4TH23              	100.00%
Q58758              	31.75%		
Bootstrap support for Q57936 as seed ortholog is 100%.
Bootstrap support for G4TH23 as seed ortholog is 100%.

Group of orthologs #183. Best score 94 bits
Score difference with first non-orthologous sequence - M.jannaschii:94 P.indica:17

Q58276              	100.00%		G4TI26              	100.00%
Bootstrap support for Q58276 as seed ortholog is 100%.
Bootstrap support for G4TI26 as seed ortholog is 79%.

Group of orthologs #184. Best score 94 bits
Score difference with first non-orthologous sequence - M.jannaschii:94 P.indica:94

Q58011              	100.00%		G4TPP5              	100.00%
Bootstrap support for Q58011 as seed ortholog is 100%.
Bootstrap support for G4TPP5 as seed ortholog is 100%.

Group of orthologs #185. Best score 93 bits
Score difference with first non-orthologous sequence - M.jannaschii:93 P.indica:93

P54059              	100.00%		G4T7F4              	100.00%
Bootstrap support for P54059 as seed ortholog is 100%.
Bootstrap support for G4T7F4 as seed ortholog is 100%.

Group of orthologs #186. Best score 93 bits
Score difference with first non-orthologous sequence - M.jannaschii:93 P.indica:93

Q60364              	100.00%		G4TA68              	100.00%
Bootstrap support for Q60364 as seed ortholog is 100%.
Bootstrap support for G4TA68 as seed ortholog is 100%.

Group of orthologs #187. Best score 93 bits
Score difference with first non-orthologous sequence - M.jannaschii:93 P.indica:93

Q57907              	100.00%		G4TPT4              	100.00%
Bootstrap support for Q57907 as seed ortholog is 100%.
Bootstrap support for G4TPT4 as seed ortholog is 100%.

Group of orthologs #188. Best score 92 bits
Score difference with first non-orthologous sequence - M.jannaschii:92 P.indica:92

Q57896              	100.00%		G4T529              	100.00%
Bootstrap support for Q57896 as seed ortholog is 100%.
Bootstrap support for G4T529 as seed ortholog is 100%.

Group of orthologs #189. Best score 92 bits
Score difference with first non-orthologous sequence - M.jannaschii:92 P.indica:92

Q58029              	100.00%		G4TFN9              	100.00%
Bootstrap support for Q58029 as seed ortholog is 100%.
Bootstrap support for G4TFN9 as seed ortholog is 100%.

Group of orthologs #190. Best score 92 bits
Score difference with first non-orthologous sequence - M.jannaschii:92 P.indica:92

Q57599              	100.00%		G4TNP3              	100.00%
Bootstrap support for Q57599 as seed ortholog is 100%.
Bootstrap support for G4TNP3 as seed ortholog is 100%.

Group of orthologs #191. Best score 91 bits
Score difference with first non-orthologous sequence - M.jannaschii:91 P.indica:91

Q59055              	100.00%		G4TCS4              	100.00%
Bootstrap support for Q59055 as seed ortholog is 100%.
Bootstrap support for G4TCS4 as seed ortholog is 100%.

Group of orthologs #192. Best score 91 bits
Score difference with first non-orthologous sequence - M.jannaschii:91 P.indica:91

Q57679              	100.00%		G4TK42              	100.00%
Bootstrap support for Q57679 as seed ortholog is 100%.
Bootstrap support for G4TK42 as seed ortholog is 100%.

Group of orthologs #193. Best score 90 bits
Score difference with first non-orthologous sequence - M.jannaschii:90 P.indica:90

P61159              	100.00%		G4TU81              	100.00%
Q60314              	14.13%		
Bootstrap support for P61159 as seed ortholog is 100%.
Bootstrap support for G4TU81 as seed ortholog is 100%.

Group of orthologs #194. Best score 90 bits
Score difference with first non-orthologous sequence - M.jannaschii:90 P.indica:9

Q58065              	100.00%		G4TPB8              	100.00%
Bootstrap support for Q58065 as seed ortholog is 100%.
Bootstrap support for G4TPB8 as seed ortholog is 47%.
Alternative seed ortholog is G4TJK2 (9 bits away from this cluster)

Group of orthologs #195. Best score 89 bits
Score difference with first non-orthologous sequence - M.jannaschii:89 P.indica:89

Q58070              	100.00%		G4TDF3              	100.00%
Bootstrap support for Q58070 as seed ortholog is 100%.
Bootstrap support for G4TDF3 as seed ortholog is 100%.

Group of orthologs #196. Best score 89 bits
Score difference with first non-orthologous sequence - M.jannaschii:89 P.indica:89

Q57638              	100.00%		G4TF73              	100.00%
Bootstrap support for Q57638 as seed ortholog is 100%.
Bootstrap support for G4TF73 as seed ortholog is 100%.

Group of orthologs #197. Best score 89 bits
Score difference with first non-orthologous sequence - M.jannaschii:89 P.indica:89

P54036              	100.00%		G4TQE2              	100.00%
Bootstrap support for P54036 as seed ortholog is 100%.
Bootstrap support for G4TQE2 as seed ortholog is 100%.

Group of orthologs #198. Best score 88 bits
Score difference with first non-orthologous sequence - M.jannaschii:88 P.indica:88

Q58504              	100.00%		G4U2H8              	100.00%
Bootstrap support for Q58504 as seed ortholog is 100%.
Bootstrap support for G4U2H8 as seed ortholog is 100%.

Group of orthologs #199. Best score 87 bits
Score difference with first non-orthologous sequence - M.jannaschii:87 P.indica:34

Q58885              	100.00%		G4T6L0              	100.00%
Bootstrap support for Q58885 as seed ortholog is 100%.
Bootstrap support for G4T6L0 as seed ortholog is 75%.

Group of orthologs #200. Best score 86 bits
Score difference with first non-orthologous sequence - M.jannaschii:86 P.indica:86

P54038              	100.00%		G4TBZ8              	100.00%
Bootstrap support for P54038 as seed ortholog is 100%.
Bootstrap support for G4TBZ8 as seed ortholog is 100%.

Group of orthologs #201. Best score 86 bits
Score difference with first non-orthologous sequence - M.jannaschii:86 P.indica:86

Q60343              	100.00%		G4TDI3              	100.00%
Bootstrap support for Q60343 as seed ortholog is 100%.
Bootstrap support for G4TDI3 as seed ortholog is 100%.

Group of orthologs #202. Best score 85 bits
Score difference with first non-orthologous sequence - M.jannaschii:85 P.indica:85

P54016              	100.00%		G4TWA6              	100.00%
Bootstrap support for P54016 as seed ortholog is 100%.
Bootstrap support for G4TWA6 as seed ortholog is 100%.

Group of orthologs #203. Best score 84 bits
Score difference with first non-orthologous sequence - M.jannaschii:84 P.indica:84

Q58997              	100.00%		G4TQY4              	100.00%
                    	       		G4TXE8              	78.14%
Bootstrap support for Q58997 as seed ortholog is 100%.
Bootstrap support for G4TQY4 as seed ortholog is 100%.

Group of orthologs #204. Best score 84 bits
Score difference with first non-orthologous sequence - M.jannaschii:84 P.indica:84

Q57749              	100.00%		G4TBH2              	100.00%
Bootstrap support for Q57749 as seed ortholog is 100%.
Bootstrap support for G4TBH2 as seed ortholog is 100%.

Group of orthologs #205. Best score 84 bits
Score difference with first non-orthologous sequence - M.jannaschii:84 P.indica:84

Q58450              	100.00%		G4TMH8              	100.00%
Bootstrap support for Q58450 as seed ortholog is 100%.
Bootstrap support for G4TMH8 as seed ortholog is 100%.

Group of orthologs #206. Best score 84 bits
Score difference with first non-orthologous sequence - M.jannaschii:84 P.indica:84

Q58348              	100.00%		G4TQI8              	100.00%
Bootstrap support for Q58348 as seed ortholog is 100%.
Bootstrap support for G4TQI8 as seed ortholog is 100%.

Group of orthologs #207. Best score 83 bits
Score difference with first non-orthologous sequence - M.jannaschii:83 P.indica:21

Q58860              	100.00%		G4T851              	100.00%
Bootstrap support for Q58860 as seed ortholog is 100%.
Bootstrap support for G4T851 as seed ortholog is 72%.
Alternative seed ortholog is G4TPJ6 (21 bits away from this cluster)

Group of orthologs #208. Best score 83 bits
Score difference with first non-orthologous sequence - M.jannaschii:83 P.indica:83

P54023              	100.00%		G4TCR1              	100.00%
Bootstrap support for P54023 as seed ortholog is 100%.
Bootstrap support for G4TCR1 as seed ortholog is 100%.

Group of orthologs #209. Best score 83 bits
Score difference with first non-orthologous sequence - M.jannaschii:83 P.indica:83

P54050              	100.00%		G4U3B0              	100.00%
Bootstrap support for P54050 as seed ortholog is 100%.
Bootstrap support for G4U3B0 as seed ortholog is 100%.

Group of orthologs #210. Best score 82 bits
Score difference with first non-orthologous sequence - M.jannaschii:82 P.indica:82

Q60176              	100.00%		G4TRY5              	100.00%
                    	       		G4T547              	45.20%
Bootstrap support for Q60176 as seed ortholog is 100%.
Bootstrap support for G4TRY5 as seed ortholog is 100%.

Group of orthologs #211. Best score 82 bits
Score difference with first non-orthologous sequence - M.jannaschii:82 P.indica:3

P54030              	100.00%		G4T7C8              	100.00%
Bootstrap support for P54030 as seed ortholog is 100%.
Bootstrap support for G4T7C8 as seed ortholog is 56%.
Alternative seed ortholog is G4TE17 (3 bits away from this cluster)

Group of orthologs #212. Best score 82 bits
Score difference with first non-orthologous sequence - M.jannaschii:82 P.indica:82

P54029              	100.00%		G4TRR6              	100.00%
Bootstrap support for P54029 as seed ortholog is 100%.
Bootstrap support for G4TRR6 as seed ortholog is 100%.

Group of orthologs #213. Best score 82 bits
Score difference with first non-orthologous sequence - M.jannaschii:82 P.indica:82

P54033              	100.00%		G4TW34              	100.00%
Bootstrap support for P54033 as seed ortholog is 100%.
Bootstrap support for G4TW34 as seed ortholog is 100%.

Group of orthologs #214. Best score 81 bits
Score difference with first non-orthologous sequence - M.jannaschii:81 P.indica:81

Q58352              	100.00%		G4U3C1              	100.00%
                    	       		G4T8K3              	7.15%
Bootstrap support for Q58352 as seed ortholog is 100%.
Bootstrap support for G4U3C1 as seed ortholog is 100%.

Group of orthologs #215. Best score 81 bits
Score difference with first non-orthologous sequence - M.jannaschii:81 P.indica:81

Q58054              	100.00%		G4TKZ2              	100.00%
Bootstrap support for Q58054 as seed ortholog is 100%.
Bootstrap support for G4TKZ2 as seed ortholog is 100%.

Group of orthologs #216. Best score 79 bits
Score difference with first non-orthologous sequence - M.jannaschii:79 P.indica:79

P54051              	100.00%		G4T5W5              	100.00%
Bootstrap support for P54051 as seed ortholog is 100%.
Bootstrap support for G4T5W5 as seed ortholog is 100%.

Group of orthologs #217. Best score 79 bits
Score difference with first non-orthologous sequence - M.jannaschii:79 P.indica:79

Q57697              	100.00%		G4T831              	100.00%
Bootstrap support for Q57697 as seed ortholog is 100%.
Bootstrap support for G4T831 as seed ortholog is 100%.

Group of orthologs #218. Best score 78 bits
Score difference with first non-orthologous sequence - M.jannaschii:78 P.indica:78

Q58481              	100.00%		G4T7Z6              	100.00%
Bootstrap support for Q58481 as seed ortholog is 100%.
Bootstrap support for G4T7Z6 as seed ortholog is 100%.

Group of orthologs #219. Best score 77 bits
Score difference with first non-orthologous sequence - M.jannaschii:77 P.indica:77

P54066              	100.00%		G4TAN1              	100.00%
Bootstrap support for P54066 as seed ortholog is 100%.
Bootstrap support for G4TAN1 as seed ortholog is 100%.

Group of orthologs #220. Best score 77 bits
Score difference with first non-orthologous sequence - M.jannaschii:77 P.indica:77

Q58337              	100.00%		G4TFQ4              	100.00%
Bootstrap support for Q58337 as seed ortholog is 100%.
Bootstrap support for G4TFQ4 as seed ortholog is 100%.

Group of orthologs #221. Best score 77 bits
Score difference with first non-orthologous sequence - M.jannaschii:77 P.indica:77

P54047              	100.00%		G4TQB2              	100.00%
Bootstrap support for P54047 as seed ortholog is 100%.
Bootstrap support for G4TQB2 as seed ortholog is 100%.

Group of orthologs #222. Best score 77 bits
Score difference with first non-orthologous sequence - M.jannaschii:36 P.indica:77

Q57884              	100.00%		G4TSN7              	100.00%
Bootstrap support for Q57884 as seed ortholog is 88%.
Bootstrap support for G4TSN7 as seed ortholog is 100%.

Group of orthologs #223. Best score 76 bits
Score difference with first non-orthologous sequence - M.jannaschii:76 P.indica:76

Q59007              	100.00%		G4T955              	100.00%
Q60326              	21.54%		
Bootstrap support for Q59007 as seed ortholog is 100%.
Bootstrap support for G4T955 as seed ortholog is 100%.

Group of orthologs #224. Best score 76 bits
Score difference with first non-orthologous sequence - M.jannaschii:76 P.indica:7

Q57891              	100.00%		G4TGV7              	100.00%
Bootstrap support for Q57891 as seed ortholog is 100%.
Bootstrap support for G4TGV7 as seed ortholog is 60%.
Alternative seed ortholog is G4TFQ9 (7 bits away from this cluster)

Group of orthologs #225. Best score 76 bits
Score difference with first non-orthologous sequence - M.jannaschii:76 P.indica:76

Q58370              	100.00%		G4TJM8              	100.00%
Bootstrap support for Q58370 as seed ortholog is 100%.
Bootstrap support for G4TJM8 as seed ortholog is 100%.

Group of orthologs #226. Best score 76 bits
Score difference with first non-orthologous sequence - M.jannaschii:76 P.indica:76

Q58444              	100.00%		G4TQS1              	100.00%
Bootstrap support for Q58444 as seed ortholog is 100%.
Bootstrap support for G4TQS1 as seed ortholog is 100%.

Group of orthologs #227. Best score 76 bits
Score difference with first non-orthologous sequence - M.jannaschii:76 P.indica:76

P54067              	100.00%		G4TU98              	100.00%
Bootstrap support for P54067 as seed ortholog is 100%.
Bootstrap support for G4TU98 as seed ortholog is 100%.

Group of orthologs #228. Best score 75 bits
Score difference with first non-orthologous sequence - M.jannaschii:75 P.indica:75

Q57695              	100.00%		G4TEN7              	100.00%
Bootstrap support for Q57695 as seed ortholog is 100%.
Bootstrap support for G4TEN7 as seed ortholog is 100%.

Group of orthologs #229. Best score 74 bits
Score difference with first non-orthologous sequence - M.jannaschii:74 P.indica:74

Q58588              	100.00%		G4TF06              	100.00%
                    	       		G4TEY7              	48.07%
Bootstrap support for Q58588 as seed ortholog is 100%.
Bootstrap support for G4TF06 as seed ortholog is 100%.

Group of orthologs #230. Best score 73 bits
Score difference with first non-orthologous sequence - M.jannaschii:73 P.indica:73

Q57977              	100.00%		G4TB19              	100.00%
Bootstrap support for Q57977 as seed ortholog is 100%.
Bootstrap support for G4TB19 as seed ortholog is 100%.

Group of orthologs #231. Best score 72 bits
Score difference with first non-orthologous sequence - M.jannaschii:72 P.indica:72

Q58728              	100.00%		G4T5T2              	100.00%
Bootstrap support for Q58728 as seed ortholog is 100%.
Bootstrap support for G4T5T2 as seed ortholog is 100%.

Group of orthologs #232. Best score 72 bits
Score difference with first non-orthologous sequence - M.jannaschii:72 P.indica:72

Q58874              	100.00%		G4TE89              	100.00%
Bootstrap support for Q58874 as seed ortholog is 100%.
Bootstrap support for G4TE89 as seed ortholog is 100%.

Group of orthologs #233. Best score 71 bits
Score difference with first non-orthologous sequence - M.jannaschii:71 P.indica:71

Q58827              	100.00%		G4T6I5              	100.00%
Bootstrap support for Q58827 as seed ortholog is 100%.
Bootstrap support for G4T6I5 as seed ortholog is 100%.

Group of orthologs #234. Best score 71 bits
Score difference with first non-orthologous sequence - M.jannaschii:71 P.indica:71

P54055              	100.00%		G4TX62              	100.00%
Bootstrap support for P54055 as seed ortholog is 100%.
Bootstrap support for G4TX62 as seed ortholog is 100%.

Group of orthologs #235. Best score 69 bits
Score difference with first non-orthologous sequence - M.jannaschii:69 P.indica:69

Q58040              	100.00%		G4TBI7              	100.00%
Bootstrap support for Q58040 as seed ortholog is 100%.
Bootstrap support for G4TBI7 as seed ortholog is 100%.

Group of orthologs #236. Best score 67 bits
Score difference with first non-orthologous sequence - M.jannaschii:67 P.indica:11

Q58418              	100.00%		G4T665              	100.00%
Q58488              	13.90%		
Q58664              	11.62%		
Q58967              	11.39%		
Q58283              	9.34%		
Q57554              	8.66%		
Q57855              	8.66%		
Q58762              	7.97%		
Q58206              	7.06%		
Q60350              	5.69%		
Q58903              	5.47%		
Q58429              	5.01%		
Bootstrap support for Q58418 as seed ortholog is 100%.
Bootstrap support for G4T665 as seed ortholog is 66%.
Alternative seed ortholog is G4U293 (11 bits away from this cluster)

Group of orthologs #237. Best score 67 bits
Score difference with first non-orthologous sequence - M.jannaschii:67 P.indica:67

Q58625              	100.00%		G4T554              	100.00%
Bootstrap support for Q58625 as seed ortholog is 100%.
Bootstrap support for G4T554 as seed ortholog is 100%.

Group of orthologs #238. Best score 67 bits
Score difference with first non-orthologous sequence - M.jannaschii:67 P.indica:67

Q58085              	100.00%		G4TGH1              	100.00%
Bootstrap support for Q58085 as seed ortholog is 100%.
Bootstrap support for G4TGH1 as seed ortholog is 100%.

Group of orthologs #239. Best score 67 bits
Score difference with first non-orthologous sequence - M.jannaschii:67 P.indica:67

Q59069              	100.00%		G4TDU7              	100.00%
Bootstrap support for Q59069 as seed ortholog is 100%.
Bootstrap support for G4TDU7 as seed ortholog is 100%.

Group of orthologs #240. Best score 67 bits
Score difference with first non-orthologous sequence - M.jannaschii:67 P.indica:67

P54011              	100.00%		G4TL59              	100.00%
Bootstrap support for P54011 as seed ortholog is 100%.
Bootstrap support for G4TL59 as seed ortholog is 100%.

Group of orthologs #241. Best score 67 bits
Score difference with first non-orthologous sequence - M.jannaschii:67 P.indica:67

Q58771              	100.00%		G4TPH0              	100.00%
Bootstrap support for Q58771 as seed ortholog is 100%.
Bootstrap support for G4TPH0 as seed ortholog is 100%.

Group of orthologs #242. Best score 67 bits
Score difference with first non-orthologous sequence - M.jannaschii:67 P.indica:67

Q58497              	100.00%		G4TSG3              	100.00%
Bootstrap support for Q58497 as seed ortholog is 100%.
Bootstrap support for G4TSG3 as seed ortholog is 100%.

Group of orthologs #243. Best score 66 bits
Score difference with first non-orthologous sequence - M.jannaschii:66 P.indica:5

Q58026              	100.00%		G4TDP3              	100.00%
                    	       		G4U342              	38.33%
                    	       		G4TH30              	35.91%
                    	       		G4TED8              	27.20%
                    	       		G4TEC1              	25.85%
                    	       		G4TQC0              	23.62%
                    	       		G4TQE8              	21.49%
                    	       		G4TED9              	18.78%
Bootstrap support for Q58026 as seed ortholog is 100%.
Bootstrap support for G4TDP3 as seed ortholog is 34%.
Alternative seed ortholog is G4TD52 (5 bits away from this cluster)

Group of orthologs #244. Best score 66 bits
Score difference with first non-orthologous sequence - M.jannaschii:66 P.indica:66

Q58925              	100.00%		G4T5T9              	100.00%
                    	       		G4TH76              	7.72%
Bootstrap support for Q58925 as seed ortholog is 100%.
Bootstrap support for G4T5T9 as seed ortholog is 100%.

Group of orthologs #245. Best score 66 bits
Score difference with first non-orthologous sequence - M.jannaschii:66 P.indica:66

Q57840              	100.00%		G4TBR2              	100.00%
Bootstrap support for Q57840 as seed ortholog is 100%.
Bootstrap support for G4TBR2 as seed ortholog is 100%.

Group of orthologs #246. Best score 66 bits
Score difference with first non-orthologous sequence - M.jannaschii:66 P.indica:66

Q57741              	100.00%		G4TLL6              	100.00%
Bootstrap support for Q57741 as seed ortholog is 100%.
Bootstrap support for G4TLL6 as seed ortholog is 100%.

Group of orthologs #247. Best score 66 bits
Score difference with first non-orthologous sequence - M.jannaschii:66 P.indica:66

Q57979              	100.00%		G4TLI0              	100.00%
Bootstrap support for Q57979 as seed ortholog is 100%.
Bootstrap support for G4TLI0 as seed ortholog is 100%.

Group of orthologs #248. Best score 65 bits
Score difference with first non-orthologous sequence - M.jannaschii:65 P.indica:65

P54061              	100.00%		G4TCB9              	100.00%
Bootstrap support for P54061 as seed ortholog is 100%.
Bootstrap support for G4TCB9 as seed ortholog is 100%.

Group of orthologs #249. Best score 64 bits
Score difference with first non-orthologous sequence - M.jannaschii:64 P.indica:64

Q58609              	100.00%		G4T6F8              	100.00%
Bootstrap support for Q58609 as seed ortholog is 100%.
Bootstrap support for G4T6F8 as seed ortholog is 100%.

Group of orthologs #250. Best score 64 bits
Score difference with first non-orthologous sequence - M.jannaschii:64 P.indica:64

P54010              	100.00%		G4TCQ9              	100.00%
Bootstrap support for P54010 as seed ortholog is 100%.
Bootstrap support for G4TCQ9 as seed ortholog is 100%.

Group of orthologs #251. Best score 64 bits
Score difference with first non-orthologous sequence - M.jannaschii:64 P.indica:64

P54053              	100.00%		G4TF25              	100.00%
Bootstrap support for P54053 as seed ortholog is 100%.
Bootstrap support for G4TF25 as seed ortholog is 100%.

Group of orthologs #252. Best score 63 bits
Score difference with first non-orthologous sequence - M.jannaschii:63 P.indica:63

Q58944              	100.00%		G4TY40              	100.00%
                    	       		G4T8R8              	50.84%
                    	       		G4T7B7              	19.66%
Bootstrap support for Q58944 as seed ortholog is 100%.
Bootstrap support for G4TY40 as seed ortholog is 100%.

Group of orthologs #253. Best score 63 bits
Score difference with first non-orthologous sequence - M.jannaschii:63 P.indica:4

Q58619              	100.00%		G4TBA6              	100.00%
Q57964              	6.92%		
Bootstrap support for Q58619 as seed ortholog is 100%.
Bootstrap support for G4TBA6 as seed ortholog is 55%.
Alternative seed ortholog is G4T649 (4 bits away from this cluster)

Group of orthologs #254. Best score 63 bits
Score difference with first non-orthologous sequence - M.jannaschii:63 P.indica:11

Q58548              	100.00%		G4T8S3              	100.00%
Bootstrap support for Q58548 as seed ortholog is 100%.
Bootstrap support for G4T8S3 as seed ortholog is 65%.
Alternative seed ortholog is G4TRD7 (11 bits away from this cluster)

Group of orthologs #255. Best score 63 bits
Score difference with first non-orthologous sequence - M.jannaschii:63 P.indica:63

Q58509              	100.00%		G4TE32              	100.00%
Bootstrap support for Q58509 as seed ortholog is 100%.
Bootstrap support for G4TE32 as seed ortholog is 100%.

Group of orthologs #256. Best score 62 bits
Score difference with first non-orthologous sequence - M.jannaschii:62 P.indica:62

Q58838              	100.00%		G4TCT4              	100.00%
Q58922              	34.57%		
Bootstrap support for Q58838 as seed ortholog is 100%.
Bootstrap support for G4TCT4 as seed ortholog is 100%.

Group of orthologs #257. Best score 62 bits
Score difference with first non-orthologous sequence - M.jannaschii:62 P.indica:62

Q58513              	100.00%		G4T929              	100.00%
Bootstrap support for Q58513 as seed ortholog is 100%.
Bootstrap support for G4T929 as seed ortholog is 100%.

Group of orthologs #258. Best score 62 bits
Score difference with first non-orthologous sequence - M.jannaschii:62 P.indica:62

P54027              	100.00%		G4TLF0              	100.00%
Bootstrap support for P54027 as seed ortholog is 100%.
Bootstrap support for G4TLF0 as seed ortholog is 100%.

Group of orthologs #259. Best score 62 bits
Score difference with first non-orthologous sequence - M.jannaschii:62 P.indica:62

Q57940              	100.00%		G4U3G2              	100.00%
Bootstrap support for Q57940 as seed ortholog is 100%.
Bootstrap support for G4U3G2 as seed ortholog is 100%.

Group of orthologs #260. Best score 61 bits
Score difference with first non-orthologous sequence - M.jannaschii:61 P.indica:61

Q57752              	100.00%		G4TB21              	100.00%
Bootstrap support for Q57752 as seed ortholog is 100%.
Bootstrap support for G4TB21 as seed ortholog is 100%.

Group of orthologs #261. Best score 60 bits
Score difference with first non-orthologous sequence - M.jannaschii:60 P.indica:60

Q57887              	100.00%		G4TI02              	100.00%
Bootstrap support for Q57887 as seed ortholog is 100%.
Bootstrap support for G4TI02 as seed ortholog is 100%.

Group of orthologs #262. Best score 60 bits
Score difference with first non-orthologous sequence - M.jannaschii:60 P.indica:60

Q58920              	100.00%		G4THF5              	100.00%
Bootstrap support for Q58920 as seed ortholog is 100%.
Bootstrap support for G4THF5 as seed ortholog is 100%.

Group of orthologs #263. Best score 59 bits
Score difference with first non-orthologous sequence - M.jannaschii:59 P.indica:59

Q58092              	100.00%		G4T6U8              	100.00%
                    	       		G4TI19              	16.02%
Bootstrap support for Q58092 as seed ortholog is 100%.
Bootstrap support for G4T6U8 as seed ortholog is 100%.

Group of orthologs #264. Best score 59 bits
Score difference with first non-orthologous sequence - M.jannaschii:59 P.indica:59

Q58977              	100.00%		G4T8P7              	100.00%
Bootstrap support for Q58977 as seed ortholog is 100%.
Bootstrap support for G4T8P7 as seed ortholog is 100%.

Group of orthologs #265. Best score 58 bits
Score difference with first non-orthologous sequence - M.jannaschii:58 P.indica:58

P54013              	100.00%		G4T9D4              	100.00%
Bootstrap support for P54013 as seed ortholog is 100%.
Bootstrap support for G4T9D4 as seed ortholog is 100%.

Group of orthologs #266. Best score 58 bits
Score difference with first non-orthologous sequence - M.jannaschii:58 P.indica:58

P54065              	100.00%		G4TEZ0              	100.00%
Bootstrap support for P54065 as seed ortholog is 100%.
Bootstrap support for G4TEZ0 as seed ortholog is 100%.

Group of orthologs #267. Best score 57 bits
Score difference with first non-orthologous sequence - M.jannaschii:57 P.indica:57

Q57742              	100.00%		G4TCW4              	100.00%
                    	       		G4TQ21              	13.82%
                    	       		G4U2X3              	13.61%
                    	       		G4TMV5              	12.98%
                    	       		G4T5M2              	11.78%
                    	       		G4TP20              	11.71%
                    	       		G4TRF8              	11.64%
                    	       		G4TM40              	11.07%
                    	       		G4T6H5              	10.44%
                    	       		G4TVL6              	10.44%
                    	       		G4TH29              	10.08%
                    	       		G4T970              	9.31%
                    	       		G4TD78              	9.24%
                    	       		G4TAG6              	6.14%
Bootstrap support for Q57742 as seed ortholog is 100%.
Bootstrap support for G4TCW4 as seed ortholog is 100%.

Group of orthologs #268. Best score 57 bits
Score difference with first non-orthologous sequence - M.jannaschii:57 P.indica:57

Q59005              	100.00%		G4TUZ2              	100.00%
                    	       		G4TN41              	84.52%
Bootstrap support for Q59005 as seed ortholog is 100%.
Bootstrap support for G4TUZ2 as seed ortholog is 100%.

Group of orthologs #269. Best score 57 bits
Score difference with first non-orthologous sequence - M.jannaschii:57 P.indica:57

Q58711              	100.00%		G4T834              	100.00%
Bootstrap support for Q58711 as seed ortholog is 100%.
Bootstrap support for G4T834 as seed ortholog is 100%.

Group of orthologs #270. Best score 57 bits
Score difference with first non-orthologous sequence - M.jannaschii:57 P.indica:57

Q57885              	100.00%		G4TBZ4              	100.00%
Bootstrap support for Q57885 as seed ortholog is 100%.
Bootstrap support for G4TBZ4 as seed ortholog is 100%.

Group of orthologs #271. Best score 57 bits
Score difference with first non-orthologous sequence - M.jannaschii:57 P.indica:57

Q58941              	100.00%		G4TKN5              	100.00%
Bootstrap support for Q58941 as seed ortholog is 100%.
Bootstrap support for G4TKN5 as seed ortholog is 100%.

Group of orthologs #272. Best score 56 bits
Score difference with first non-orthologous sequence - M.jannaschii:56 P.indica:9

Q58377              	100.00%		G4TMF7              	100.00%
Bootstrap support for Q58377 as seed ortholog is 100%.
Bootstrap support for G4TMF7 as seed ortholog is 64%.
Alternative seed ortholog is G4TP46 (9 bits away from this cluster)

Group of orthologs #273. Best score 55 bits
Score difference with first non-orthologous sequence - M.jannaschii:55 P.indica:55

Q58025              	100.00%		G4TE72              	100.00%
Bootstrap support for Q58025 as seed ortholog is 100%.
Bootstrap support for G4TE72 as seed ortholog is 100%.

Group of orthologs #274. Best score 55 bits
Score difference with first non-orthologous sequence - M.jannaschii:55 P.indica:55

P54046              	100.00%		G4TNZ9              	100.00%
Bootstrap support for P54046 as seed ortholog is 100%.
Bootstrap support for G4TNZ9 as seed ortholog is 100%.

Group of orthologs #275. Best score 52 bits
Score difference with first non-orthologous sequence - M.jannaschii:52 P.indica:11

Q58832              	100.00%		G4T8D0              	100.00%
Bootstrap support for Q58832 as seed ortholog is 100%.
Bootstrap support for G4T8D0 as seed ortholog is 61%.
Alternative seed ortholog is G4TF92 (11 bits away from this cluster)

Group of orthologs #276. Best score 52 bits
Score difference with first non-orthologous sequence - M.jannaschii:52 P.indica:52

P54022              	100.00%		G4TVI1              	100.00%
Bootstrap support for P54022 as seed ortholog is 100%.
Bootstrap support for G4TVI1 as seed ortholog is 100%.

Group of orthologs #277. Best score 50 bits
Score difference with first non-orthologous sequence - M.jannaschii:50 P.indica:50

Q58452              	100.00%		G4TGY8              	100.00%
Bootstrap support for Q58452 as seed ortholog is 100%.
Bootstrap support for G4TGY8 as seed ortholog is 100%.

Group of orthologs #278. Best score 48 bits
Score difference with first non-orthologous sequence - M.jannaschii:48 P.indica:48

Q58741              	100.00%		G4TTU0              	100.00%
Q57711              	18.72%		
Q58350              	16.81%		
O06917              	15.25%		
Q58823              	7.28%		
Q58208              	5.72%		
Bootstrap support for Q58741 as seed ortholog is 100%.
Bootstrap support for G4TTU0 as seed ortholog is 100%.

Group of orthologs #279. Best score 48 bits
Score difference with first non-orthologous sequence - M.jannaschii:48 P.indica:48

Q58414              	100.00%		G4TKH5              	100.00%
                    	       		G4TBC5              	36.12%
Bootstrap support for Q58414 as seed ortholog is 100%.
Bootstrap support for G4TKH5 as seed ortholog is 100%.

Group of orthologs #280. Best score 47 bits
Score difference with first non-orthologous sequence - M.jannaschii:47 P.indica:47

Q58338              	100.00%		G4TA43              	100.00%
Q58292              	8.19%		
Bootstrap support for Q58338 as seed ortholog is 100%.
Bootstrap support for G4TA43 as seed ortholog is 100%.

Group of orthologs #281. Best score 47 bits
Score difference with first non-orthologous sequence - M.jannaschii:47 P.indica:47

P54035              	100.00%		G4T8C7              	100.00%
Bootstrap support for P54035 as seed ortholog is 100%.
Bootstrap support for G4T8C7 as seed ortholog is 100%.

Group of orthologs #282. Best score 47 bits
Score difference with first non-orthologous sequence - M.jannaschii:47 P.indica:47

Q57902              	100.00%		G4TD26              	100.00%
Bootstrap support for Q57902 as seed ortholog is 100%.
Bootstrap support for G4TD26 as seed ortholog is 100%.

Group of orthologs #283. Best score 46 bits
Score difference with first non-orthologous sequence - M.jannaschii:46 P.indica:46

Q58483              	100.00%		G4T9F9              	100.00%
Q58141              	27.49%		G4T9G0              	88.24%
                    	       		G4TG87              	77.54%
                    	       		G4TDV8              	36.36%
Bootstrap support for Q58483 as seed ortholog is 100%.
Bootstrap support for G4T9F9 as seed ortholog is 100%.

Group of orthologs #284. Best score 46 bits
Score difference with first non-orthologous sequence - M.jannaschii:46 P.indica:46

Q57726              	100.00%		G4TU91              	100.00%
Q58235              	35.34%		G4TU90              	41.27%
Bootstrap support for Q57726 as seed ortholog is 100%.
Bootstrap support for G4TU91 as seed ortholog is 100%.

Group of orthologs #285. Best score 46 bits
Score difference with first non-orthologous sequence - M.jannaschii:46 P.indica:46

Q58220              	100.00%		G4TKG0              	100.00%
Bootstrap support for Q58220 as seed ortholog is 100%.
Bootstrap support for G4TKG0 as seed ortholog is 100%.

Group of orthologs #286. Best score 45 bits
Score difference with first non-orthologous sequence - M.jannaschii:45 P.indica:4

Q58735              	100.00%		G4TFT8              	100.00%
                    	       		G4TS49              	21.86%
                    	       		G4TAU7              	21.31%
                    	       		G4TJX9              	21.31%
                    	       		G4TWQ4              	20.77%
                    	       		G4TRG3              	20.22%
                    	       		G4TBK2              	18.03%
                    	       		G4TJQ4              	16.94%
                    	       		G4TY75              	15.30%
                    	       		G4TI38              	14.21%
                    	       		G4T9K3              	13.66%
                    	       		G4U2C5              	11.75%
                    	       		G4T953              	7.92%
                    	       		G4TYH2              	7.92%
                    	       		G4TIR0              	7.65%
                    	       		G4T9K4              	7.65%
                    	       		G4U2X5              	7.65%
                    	       		G4T988              	7.38%
                    	       		G4TRX9              	7.38%
Bootstrap support for Q58735 as seed ortholog is 100%.
Bootstrap support for G4TFT8 as seed ortholog is 52%.
Alternative seed ortholog is G4TDW7 (4 bits away from this cluster)

Group of orthologs #287. Best score 45 bits
Score difference with first non-orthologous sequence - M.jannaschii:45 P.indica:45

P54028              	100.00%		G4TBY1              	100.00%
Bootstrap support for P54028 as seed ortholog is 100%.
Bootstrap support for G4TBY1 as seed ortholog is 100%.

Group of orthologs #288. Best score 45 bits
Score difference with first non-orthologous sequence - M.jannaschii:45 P.indica:45

Q58716              	100.00%		G4TN59              	100.00%
Bootstrap support for Q58716 as seed ortholog is 100%.
Bootstrap support for G4TN59 as seed ortholog is 100%.

Group of orthologs #289. Best score 44 bits
Score difference with first non-orthologous sequence - M.jannaschii:44 P.indica:44

P54054              	100.00%		G4TMA8              	100.00%
Bootstrap support for P54054 as seed ortholog is 100%.
Bootstrap support for G4TMA8 as seed ortholog is 100%.

Group of orthologs #290. Best score 42 bits
Score difference with first non-orthologous sequence - M.jannaschii:42 P.indica:42

Q58987              	100.00%		G4TFJ4              	100.00%
Bootstrap support for Q58987 as seed ortholog is 100%.
Bootstrap support for G4TFJ4 as seed ortholog is 100%.

Group of orthologs #291. Best score 41 bits
Score difference with first non-orthologous sequence - M.jannaschii:41 P.indica:41

Q58498              	100.00%		G4U3E9              	100.00%
                    	       		G4U3E8              	14.65%
                    	       		G4U3E2              	14.44%
                    	       		G4U3G4              	12.31%
Bootstrap support for Q58498 as seed ortholog is 100%.
Bootstrap support for G4U3E9 as seed ortholog is 100%.

Group of orthologs #292. Best score 41 bits
Score difference with first non-orthologous sequence - M.jannaschii:41 P.indica:41

Q58970              	100.00%		G4TCZ0              	100.00%
Q57690              	19.36%		
Bootstrap support for Q58970 as seed ortholog is 100%.
Bootstrap support for G4TCZ0 as seed ortholog is 100%.

Group of orthologs #293. Best score 41 bits
Score difference with first non-orthologous sequence - M.jannaschii:41 P.indica:41

Q57817              	100.00%		G4TMD5              	100.00%
Bootstrap support for Q57817 as seed ortholog is 100%.
Bootstrap support for G4TMD5 as seed ortholog is 100%.