###################################
1681 groups of orthologs
1725 in-paralogs from L.thermotolerans
1780 in-paralogs from P.jiroveci
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
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Group of orthologs #1. Best score 2887 bits
Score difference with first non-orthologous sequence - L.thermotolerans:2887 P.jiroveci:2887

C5E1Y8              	100.00%		L0PCQ0              	100.00%
Bootstrap support for C5E1Y8 as seed ortholog is 100%.
Bootstrap support for L0PCQ0 as seed ortholog is 100%.

Group of orthologs #2. Best score 2722 bits
Score difference with first non-orthologous sequence - L.thermotolerans:2722 P.jiroveci:2722

C5DH99              	100.00%		L0PFL5              	100.00%
Bootstrap support for C5DH99 as seed ortholog is 100%.
Bootstrap support for L0PFL5 as seed ortholog is 100%.

Group of orthologs #3. Best score 2562 bits
Score difference with first non-orthologous sequence - L.thermotolerans:2562 P.jiroveci:2562

C5DMZ4              	100.00%		L0PEL4              	100.00%
Bootstrap support for C5DMZ4 as seed ortholog is 100%.
Bootstrap support for L0PEL4 as seed ortholog is 100%.

Group of orthologs #4. Best score 2537 bits
Score difference with first non-orthologous sequence - L.thermotolerans:2537 P.jiroveci:2537

C5DDN7              	100.00%		L0PEQ1              	100.00%
Bootstrap support for C5DDN7 as seed ortholog is 100%.
Bootstrap support for L0PEQ1 as seed ortholog is 100%.

Group of orthologs #5. Best score 2512 bits
Score difference with first non-orthologous sequence - L.thermotolerans:2512 P.jiroveci:2512

C5DBX3              	100.00%		L0PGI2              	100.00%
Bootstrap support for C5DBX3 as seed ortholog is 100%.
Bootstrap support for L0PGI2 as seed ortholog is 100%.

Group of orthologs #6. Best score 2305 bits
Score difference with first non-orthologous sequence - L.thermotolerans:2305 P.jiroveci:2305

C5E245              	100.00%		L0PB90              	100.00%
Bootstrap support for C5E245 as seed ortholog is 100%.
Bootstrap support for L0PB90 as seed ortholog is 100%.

Group of orthologs #7. Best score 2292 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1210 P.jiroveci:2292

C5DKM3              	100.00%		L0P7C3              	100.00%
Bootstrap support for C5DKM3 as seed ortholog is 100%.
Bootstrap support for L0P7C3 as seed ortholog is 100%.

Group of orthologs #8. Best score 2291 bits
Score difference with first non-orthologous sequence - L.thermotolerans:366 P.jiroveci:2291

C5DNK3              	100.00%		L0PD34              	100.00%
Bootstrap support for C5DNK3 as seed ortholog is 99%.
Bootstrap support for L0PD34 as seed ortholog is 100%.

Group of orthologs #9. Best score 2045 bits
Score difference with first non-orthologous sequence - L.thermotolerans:2045 P.jiroveci:2045

C5DKL6              	100.00%		L0PGR1              	100.00%
Bootstrap support for C5DKL6 as seed ortholog is 100%.
Bootstrap support for L0PGR1 as seed ortholog is 100%.

Group of orthologs #10. Best score 1889 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1889 P.jiroveci:1889

C5DK88              	100.00%		L0PGJ4              	100.00%
Bootstrap support for C5DK88 as seed ortholog is 100%.
Bootstrap support for L0PGJ4 as seed ortholog is 100%.

Group of orthologs #11. Best score 1678 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1678 P.jiroveci:1678

C5DLM6              	100.00%		L0PBF5              	100.00%
Bootstrap support for C5DLM6 as seed ortholog is 100%.
Bootstrap support for L0PBF5 as seed ortholog is 100%.

Group of orthologs #12. Best score 1634 bits
Score difference with first non-orthologous sequence - L.thermotolerans:914 P.jiroveci:1634

C5DEU3              	100.00%		L0PG77              	100.00%
Bootstrap support for C5DEU3 as seed ortholog is 100%.
Bootstrap support for L0PG77 as seed ortholog is 100%.

Group of orthologs #13. Best score 1622 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1622 P.jiroveci:1622

C5DD87              	100.00%		L0PD06              	100.00%
Bootstrap support for C5DD87 as seed ortholog is 100%.
Bootstrap support for L0PD06 as seed ortholog is 100%.

Group of orthologs #14. Best score 1614 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1614 P.jiroveci:1614

C5DN54              	100.00%		L0PHB1              	100.00%
Bootstrap support for C5DN54 as seed ortholog is 100%.
Bootstrap support for L0PHB1 as seed ortholog is 100%.

Group of orthologs #15. Best score 1593 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1593 P.jiroveci:1593

C5DJG5              	100.00%		L0PB43              	100.00%
Bootstrap support for C5DJG5 as seed ortholog is 100%.
Bootstrap support for L0PB43 as seed ortholog is 100%.

Group of orthologs #16. Best score 1477 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1477 P.jiroveci:1477

C5DHN4              	100.00%		L0PFR4              	100.00%
Bootstrap support for C5DHN4 as seed ortholog is 100%.
Bootstrap support for L0PFR4 as seed ortholog is 100%.

Group of orthologs #17. Best score 1410 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1037 P.jiroveci:1410

C5DNH9              	100.00%		L0P9P7              	100.00%
Bootstrap support for C5DNH9 as seed ortholog is 100%.
Bootstrap support for L0P9P7 as seed ortholog is 100%.

Group of orthologs #18. Best score 1370 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1370 P.jiroveci:1370

C5DMF0              	100.00%		L0P818              	100.00%
Bootstrap support for C5DMF0 as seed ortholog is 100%.
Bootstrap support for L0P818 as seed ortholog is 100%.

Group of orthologs #19. Best score 1322 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1322 P.jiroveci:1322

C5DB95              	100.00%		L0PG12              	100.00%
Bootstrap support for C5DB95 as seed ortholog is 100%.
Bootstrap support for L0PG12 as seed ortholog is 100%.

Group of orthologs #20. Best score 1312 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1312 P.jiroveci:1312

C5DII9              	100.00%		L0P9F0              	100.00%
Bootstrap support for C5DII9 as seed ortholog is 100%.
Bootstrap support for L0P9F0 as seed ortholog is 100%.

Group of orthologs #21. Best score 1305 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1305 P.jiroveci:1111

C5DHX7              	100.00%		L0PGZ9              	100.00%
Bootstrap support for C5DHX7 as seed ortholog is 100%.
Bootstrap support for L0PGZ9 as seed ortholog is 100%.

Group of orthologs #22. Best score 1291 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1291 P.jiroveci:1291

C5DN02              	100.00%		L0PA30              	100.00%
Bootstrap support for C5DN02 as seed ortholog is 100%.
Bootstrap support for L0PA30 as seed ortholog is 100%.

Group of orthologs #23. Best score 1284 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1284 P.jiroveci:1284

C5DF96              	100.00%		L0PF80              	100.00%
Bootstrap support for C5DF96 as seed ortholog is 100%.
Bootstrap support for L0PF80 as seed ortholog is 100%.

Group of orthologs #24. Best score 1275 bits
Score difference with first non-orthologous sequence - L.thermotolerans:703 P.jiroveci:1196

C5DG38              	100.00%		L0PG61              	100.00%
Bootstrap support for C5DG38 as seed ortholog is 100%.
Bootstrap support for L0PG61 as seed ortholog is 100%.

Group of orthologs #25. Best score 1271 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1271 P.jiroveci:1271

C5DM02              	100.00%		L0PAK7              	100.00%
                    	       		L0P8F2              	64.63%
Bootstrap support for C5DM02 as seed ortholog is 100%.
Bootstrap support for L0PAK7 as seed ortholog is 100%.

Group of orthologs #26. Best score 1267 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1267 P.jiroveci:1267

C5DN59              	100.00%		L0PAC9              	100.00%
Bootstrap support for C5DN59 as seed ortholog is 100%.
Bootstrap support for L0PAC9 as seed ortholog is 100%.

Group of orthologs #27. Best score 1250 bits
Score difference with first non-orthologous sequence - L.thermotolerans:393 P.jiroveci:1250

C5DBR1              	100.00%		L0PBY6              	100.00%
Bootstrap support for C5DBR1 as seed ortholog is 100%.
Bootstrap support for L0PBY6 as seed ortholog is 100%.

Group of orthologs #28. Best score 1242 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1242 P.jiroveci:676

C5DLC9              	100.00%		L0PDB3              	100.00%
Bootstrap support for C5DLC9 as seed ortholog is 100%.
Bootstrap support for L0PDB3 as seed ortholog is 100%.

Group of orthologs #29. Best score 1236 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1236 P.jiroveci:1236

C5DDL7              	100.00%		L0PFU4              	100.00%
Bootstrap support for C5DDL7 as seed ortholog is 100%.
Bootstrap support for L0PFU4 as seed ortholog is 100%.

Group of orthologs #30. Best score 1227 bits
Score difference with first non-orthologous sequence - L.thermotolerans:694 P.jiroveci:1227

C5E350              	100.00%		L0PEW0              	100.00%
Bootstrap support for C5E350 as seed ortholog is 100%.
Bootstrap support for L0PEW0 as seed ortholog is 100%.

Group of orthologs #31. Best score 1206 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1206 P.jiroveci:1206

C5DMI7              	100.00%		L0PGR4              	100.00%
                    	       		L0PFQ2              	88.10%
Bootstrap support for C5DMI7 as seed ortholog is 100%.
Bootstrap support for L0PGR4 as seed ortholog is 100%.

Group of orthologs #32. Best score 1163 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1163 P.jiroveci:1163

C5DC89              	100.00%		L0PCK0              	100.00%
                    	       		L0P7U1              	99.00%
Bootstrap support for C5DC89 as seed ortholog is 100%.
Bootstrap support for L0PCK0 as seed ortholog is 100%.

Group of orthologs #33. Best score 1161 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1161 P.jiroveci:1161

C5DF14              	100.00%		L0P915              	100.00%
Bootstrap support for C5DF14 as seed ortholog is 100%.
Bootstrap support for L0P915 as seed ortholog is 100%.

Group of orthologs #34. Best score 1155 bits
Score difference with first non-orthologous sequence - L.thermotolerans:504 P.jiroveci:1155

C5E3B2              	100.00%		L0PDF8              	100.00%
Bootstrap support for C5E3B2 as seed ortholog is 100%.
Bootstrap support for L0PDF8 as seed ortholog is 100%.

Group of orthologs #35. Best score 1145 bits
Score difference with first non-orthologous sequence - L.thermotolerans:761 P.jiroveci:1057

C5DBN9              	100.00%		L0PAG9              	100.00%
Bootstrap support for C5DBN9 as seed ortholog is 100%.
Bootstrap support for L0PAG9 as seed ortholog is 100%.

Group of orthologs #36. Best score 1135 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1135 P.jiroveci:1135

C5DL15              	100.00%		L0PEU6              	100.00%
Bootstrap support for C5DL15 as seed ortholog is 100%.
Bootstrap support for L0PEU6 as seed ortholog is 100%.

Group of orthologs #37. Best score 1131 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1131 P.jiroveci:1131

C5DMI1              	100.00%		L0PB32              	100.00%
Bootstrap support for C5DMI1 as seed ortholog is 100%.
Bootstrap support for L0PB32 as seed ortholog is 100%.

Group of orthologs #38. Best score 1131 bits
Score difference with first non-orthologous sequence - L.thermotolerans:804 P.jiroveci:1131

C5DL49              	100.00%		L0PDK3              	100.00%
Bootstrap support for C5DL49 as seed ortholog is 100%.
Bootstrap support for L0PDK3 as seed ortholog is 100%.

Group of orthologs #39. Best score 1101 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1101 P.jiroveci:1101

C5E238              	100.00%		L0PCR2              	100.00%
Bootstrap support for C5E238 as seed ortholog is 100%.
Bootstrap support for L0PCR2 as seed ortholog is 100%.

Group of orthologs #40. Best score 1101 bits
Score difference with first non-orthologous sequence - L.thermotolerans:45 P.jiroveci:1101

C5E3P0              	100.00%		L0PG21              	100.00%
Bootstrap support for C5E3P0 as seed ortholog is 79%.
Bootstrap support for L0PG21 as seed ortholog is 100%.

Group of orthologs #41. Best score 1094 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1094 P.jiroveci:719

C5DN64              	100.00%		L0PB85              	100.00%
Bootstrap support for C5DN64 as seed ortholog is 100%.
Bootstrap support for L0PB85 as seed ortholog is 100%.

Group of orthologs #42. Best score 1074 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1074 P.jiroveci:1074

C5DG24              	100.00%		L0PDQ4              	100.00%
Bootstrap support for C5DG24 as seed ortholog is 100%.
Bootstrap support for L0PDQ4 as seed ortholog is 100%.

Group of orthologs #43. Best score 1055 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1055 P.jiroveci:1055

C5DH43              	100.00%		L0P7X5              	100.00%
Bootstrap support for C5DH43 as seed ortholog is 100%.
Bootstrap support for L0P7X5 as seed ortholog is 100%.

Group of orthologs #44. Best score 1033 bits
Score difference with first non-orthologous sequence - L.thermotolerans:578 P.jiroveci:503

C5E2M6              	100.00%		L0PFC8              	100.00%
Bootstrap support for C5E2M6 as seed ortholog is 100%.
Bootstrap support for L0PFC8 as seed ortholog is 100%.

Group of orthologs #45. Best score 1024 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1024 P.jiroveci:1024

C5DF84              	100.00%		L0PEL5              	100.00%
C5DMI4              	100.00%		L0PGC2              	41.05%
Bootstrap support for C5DF84 as seed ortholog is 100%.
Bootstrap support for C5DMI4 as seed ortholog is 100%.
Bootstrap support for L0PEL5 as seed ortholog is 100%.

Group of orthologs #46. Best score 1023 bits
Score difference with first non-orthologous sequence - L.thermotolerans:827 P.jiroveci:1023

C5DHD5              	100.00%		L0PB83              	100.00%
Bootstrap support for C5DHD5 as seed ortholog is 100%.
Bootstrap support for L0PB83 as seed ortholog is 100%.

Group of orthologs #47. Best score 1014 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1014 P.jiroveci:1014

C5DN55              	100.00%		L0PD55              	100.00%
Bootstrap support for C5DN55 as seed ortholog is 100%.
Bootstrap support for L0PD55 as seed ortholog is 100%.

Group of orthologs #48. Best score 1007 bits
Score difference with first non-orthologous sequence - L.thermotolerans:832 P.jiroveci:800

C5DMR9              	100.00%		L0PGL4              	100.00%
                    	       		L0P7Q7              	15.74%
Bootstrap support for C5DMR9 as seed ortholog is 100%.
Bootstrap support for L0PGL4 as seed ortholog is 100%.

Group of orthologs #49. Best score 1007 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1007 P.jiroveci:1007

C5E277              	100.00%		L0P7P6              	100.00%
Bootstrap support for C5E277 as seed ortholog is 100%.
Bootstrap support for L0P7P6 as seed ortholog is 100%.

Group of orthologs #50. Best score 1002 bits
Score difference with first non-orthologous sequence - L.thermotolerans:242 P.jiroveci:1002

C5DGA3              	100.00%		L0PFN4              	100.00%
Bootstrap support for C5DGA3 as seed ortholog is 100%.
Bootstrap support for L0PFN4 as seed ortholog is 100%.

Group of orthologs #51. Best score 1000 bits
Score difference with first non-orthologous sequence - L.thermotolerans:1000 P.jiroveci:1000

C5DD70              	100.00%		L0P7R6              	100.00%
                    	       		L0PHF8              	80.30%
Bootstrap support for C5DD70 as seed ortholog is 100%.
Bootstrap support for L0P7R6 as seed ortholog is 100%.

Group of orthologs #52. Best score 987 bits
Score difference with first non-orthologous sequence - L.thermotolerans:987 P.jiroveci:987

C5DHR1              	100.00%		L0PC43              	100.00%
                    	       		L0PCW3              	40.83%
Bootstrap support for C5DHR1 as seed ortholog is 100%.
Bootstrap support for L0PC43 as seed ortholog is 100%.

Group of orthologs #53. Best score 976 bits
Score difference with first non-orthologous sequence - L.thermotolerans:976 P.jiroveci:853

C5DF90              	100.00%		L0PIF0              	100.00%
Bootstrap support for C5DF90 as seed ortholog is 100%.
Bootstrap support for L0PIF0 as seed ortholog is 100%.

Group of orthologs #54. Best score 974 bits
Score difference with first non-orthologous sequence - L.thermotolerans:974 P.jiroveci:974

C5DG15              	100.00%		L0PAP2              	100.00%
Bootstrap support for C5DG15 as seed ortholog is 100%.
Bootstrap support for L0PAP2 as seed ortholog is 100%.

Group of orthologs #55. Best score 973 bits
Score difference with first non-orthologous sequence - L.thermotolerans:268 P.jiroveci:973

C5E2X1              	100.00%		L0PEK6              	100.00%
C5DE62              	19.64%		
Bootstrap support for C5E2X1 as seed ortholog is 100%.
Bootstrap support for L0PEK6 as seed ortholog is 100%.

Group of orthologs #56. Best score 973 bits
Score difference with first non-orthologous sequence - L.thermotolerans:786 P.jiroveci:973

C5DGJ4              	100.00%		L0P928              	100.00%
Bootstrap support for C5DGJ4 as seed ortholog is 100%.
Bootstrap support for L0P928 as seed ortholog is 100%.

Group of orthologs #57. Best score 971 bits
Score difference with first non-orthologous sequence - L.thermotolerans:971 P.jiroveci:971

C5DHT9              	100.00%		L0P710              	100.00%
Bootstrap support for C5DHT9 as seed ortholog is 100%.
Bootstrap support for L0P710 as seed ortholog is 100%.

Group of orthologs #58. Best score 970 bits
Score difference with first non-orthologous sequence - L.thermotolerans:755 P.jiroveci:970

C5DHJ3              	100.00%		L0PGL8              	100.00%
Bootstrap support for C5DHJ3 as seed ortholog is 100%.
Bootstrap support for L0PGL8 as seed ortholog is 100%.

Group of orthologs #59. Best score 965 bits
Score difference with first non-orthologous sequence - L.thermotolerans:965 P.jiroveci:965

C5DLN2              	100.00%		L0PAQ3              	100.00%
Bootstrap support for C5DLN2 as seed ortholog is 100%.
Bootstrap support for L0PAQ3 as seed ortholog is 100%.

Group of orthologs #60. Best score 961 bits
Score difference with first non-orthologous sequence - L.thermotolerans:961 P.jiroveci:961

C5DBY6              	100.00%		L0PBF3              	100.00%
Bootstrap support for C5DBY6 as seed ortholog is 100%.
Bootstrap support for L0PBF3 as seed ortholog is 100%.

Group of orthologs #61. Best score 959 bits
Score difference with first non-orthologous sequence - L.thermotolerans:959 P.jiroveci:959

C5DFG8              	100.00%		L0PDM0              	100.00%
Bootstrap support for C5DFG8 as seed ortholog is 100%.
Bootstrap support for L0PDM0 as seed ortholog is 100%.

Group of orthologs #62. Best score 958 bits
Score difference with first non-orthologous sequence - L.thermotolerans:533 P.jiroveci:958

C5DG34              	100.00%		L0PGU1              	100.00%
Bootstrap support for C5DG34 as seed ortholog is 100%.
Bootstrap support for L0PGU1 as seed ortholog is 100%.

Group of orthologs #63. Best score 956 bits
Score difference with first non-orthologous sequence - L.thermotolerans:956 P.jiroveci:956

C5E2W2              	100.00%		L0PEK9              	100.00%
Bootstrap support for C5E2W2 as seed ortholog is 100%.
Bootstrap support for L0PEK9 as seed ortholog is 100%.

Group of orthologs #64. Best score 951 bits
Score difference with first non-orthologous sequence - L.thermotolerans:951 P.jiroveci:951

C5DD73              	100.00%		L0PG53              	100.00%
Bootstrap support for C5DD73 as seed ortholog is 100%.
Bootstrap support for L0PG53 as seed ortholog is 100%.

Group of orthologs #65. Best score 942 bits
Score difference with first non-orthologous sequence - L.thermotolerans:942 P.jiroveci:942

C5DMB5              	100.00%		L0P9H4              	100.00%
Bootstrap support for C5DMB5 as seed ortholog is 100%.
Bootstrap support for L0P9H4 as seed ortholog is 100%.

Group of orthologs #66. Best score 938 bits
Score difference with first non-orthologous sequence - L.thermotolerans:938 P.jiroveci:938

C5E287              	100.00%		L0PAW9              	100.00%
                    	       		L0PBZ0              	67.73%
Bootstrap support for C5E287 as seed ortholog is 100%.
Bootstrap support for L0PAW9 as seed ortholog is 100%.

Group of orthologs #67. Best score 937 bits
Score difference with first non-orthologous sequence - L.thermotolerans:304 P.jiroveci:937

C5DKS0              	100.00%		L0PFS2              	100.00%
Bootstrap support for C5DKS0 as seed ortholog is 100%.
Bootstrap support for L0PFS2 as seed ortholog is 100%.

Group of orthologs #68. Best score 929 bits
Score difference with first non-orthologous sequence - L.thermotolerans:833 P.jiroveci:642

C5DKW3              	100.00%		L0PAF4              	100.00%
Bootstrap support for C5DKW3 as seed ortholog is 100%.
Bootstrap support for L0PAF4 as seed ortholog is 100%.

Group of orthologs #69. Best score 906 bits
Score difference with first non-orthologous sequence - L.thermotolerans:906 P.jiroveci:906

C5DCR6              	100.00%		L0PBQ4              	100.00%
Bootstrap support for C5DCR6 as seed ortholog is 100%.
Bootstrap support for L0PBQ4 as seed ortholog is 100%.

Group of orthologs #70. Best score 885 bits
Score difference with first non-orthologous sequence - L.thermotolerans:704 P.jiroveci:885

C5E3G8              	100.00%		L0PC37              	100.00%
Bootstrap support for C5E3G8 as seed ortholog is 100%.
Bootstrap support for L0PC37 as seed ortholog is 100%.

Group of orthologs #71. Best score 884 bits
Score difference with first non-orthologous sequence - L.thermotolerans:884 P.jiroveci:884

C5E2X9              	100.00%		L0PD31              	100.00%
Bootstrap support for C5E2X9 as seed ortholog is 100%.
Bootstrap support for L0PD31 as seed ortholog is 100%.

Group of orthologs #72. Best score 882 bits
Score difference with first non-orthologous sequence - L.thermotolerans:709 P.jiroveci:882

C5DGL7              	100.00%		L0PF72              	100.00%
Bootstrap support for C5DGL7 as seed ortholog is 100%.
Bootstrap support for L0PF72 as seed ortholog is 100%.

Group of orthologs #73. Best score 881 bits
Score difference with first non-orthologous sequence - L.thermotolerans:881 P.jiroveci:881

C5DCS9              	100.00%		L0PC54              	100.00%
Bootstrap support for C5DCS9 as seed ortholog is 100%.
Bootstrap support for L0PC54 as seed ortholog is 100%.

Group of orthologs #74. Best score 875 bits
Score difference with first non-orthologous sequence - L.thermotolerans:875 P.jiroveci:875

C5DMA0              	100.00%		L0PDI4              	100.00%
Bootstrap support for C5DMA0 as seed ortholog is 100%.
Bootstrap support for L0PDI4 as seed ortholog is 100%.

Group of orthologs #75. Best score 874 bits
Score difference with first non-orthologous sequence - L.thermotolerans:874 P.jiroveci:874

C5DGX5              	100.00%		L0PG27              	100.00%
Bootstrap support for C5DGX5 as seed ortholog is 100%.
Bootstrap support for L0PG27 as seed ortholog is 100%.

Group of orthologs #76. Best score 874 bits
Score difference with first non-orthologous sequence - L.thermotolerans:769 P.jiroveci:874

C5DN65              	100.00%		L0PDF1              	100.00%
Bootstrap support for C5DN65 as seed ortholog is 100%.
Bootstrap support for L0PDF1 as seed ortholog is 100%.

Group of orthologs #77. Best score 871 bits
Score difference with first non-orthologous sequence - L.thermotolerans:871 P.jiroveci:871

C5E2V9              	100.00%		L0PA62              	100.00%
Bootstrap support for C5E2V9 as seed ortholog is 100%.
Bootstrap support for L0PA62 as seed ortholog is 100%.

Group of orthologs #78. Best score 870 bits
Score difference with first non-orthologous sequence - L.thermotolerans:870 P.jiroveci:870

C5DG30              	100.00%		L0P8L6              	100.00%
Bootstrap support for C5DG30 as seed ortholog is 100%.
Bootstrap support for L0P8L6 as seed ortholog is 100%.

Group of orthologs #79. Best score 870 bits
Score difference with first non-orthologous sequence - L.thermotolerans:709 P.jiroveci:736

C5DNQ2              	100.00%		L0PBP8              	100.00%
Bootstrap support for C5DNQ2 as seed ortholog is 100%.
Bootstrap support for L0PBP8 as seed ortholog is 100%.

Group of orthologs #80. Best score 869 bits
Score difference with first non-orthologous sequence - L.thermotolerans:869 P.jiroveci:697

C5DE61              	100.00%		L0PBQ6              	100.00%
Bootstrap support for C5DE61 as seed ortholog is 100%.
Bootstrap support for L0PBQ6 as seed ortholog is 100%.

Group of orthologs #81. Best score 863 bits
Score difference with first non-orthologous sequence - L.thermotolerans:863 P.jiroveci:863

C5DE14              	100.00%		L0P9H5              	100.00%
                    	       		L0P8S4              	40.58%
Bootstrap support for C5DE14 as seed ortholog is 100%.
Bootstrap support for L0P9H5 as seed ortholog is 100%.

Group of orthologs #82. Best score 858 bits
Score difference with first non-orthologous sequence - L.thermotolerans:220 P.jiroveci:858

C5DMC8              	100.00%		L0PFV0              	100.00%
Bootstrap support for C5DMC8 as seed ortholog is 100%.
Bootstrap support for L0PFV0 as seed ortholog is 100%.

Group of orthologs #83. Best score 854 bits
Score difference with first non-orthologous sequence - L.thermotolerans:854 P.jiroveci:854

C5DN99              	100.00%		L0PG32              	100.00%
Bootstrap support for C5DN99 as seed ortholog is 100%.
Bootstrap support for L0PG32 as seed ortholog is 100%.

Group of orthologs #84. Best score 851 bits
Score difference with first non-orthologous sequence - L.thermotolerans:851 P.jiroveci:851

C5DNP3              	100.00%		L0PGB8              	100.00%
Bootstrap support for C5DNP3 as seed ortholog is 100%.
Bootstrap support for L0PGB8 as seed ortholog is 100%.

Group of orthologs #85. Best score 844 bits
Score difference with first non-orthologous sequence - L.thermotolerans:844 P.jiroveci:844

C5E393              	100.00%		L0PDF3              	100.00%
Bootstrap support for C5E393 as seed ortholog is 100%.
Bootstrap support for L0PDF3 as seed ortholog is 100%.

Group of orthologs #86. Best score 843 bits
Score difference with first non-orthologous sequence - L.thermotolerans:563 P.jiroveci:843

C5DN32              	100.00%		L0PBL6              	100.00%
Bootstrap support for C5DN32 as seed ortholog is 100%.
Bootstrap support for L0PBL6 as seed ortholog is 100%.

Group of orthologs #87. Best score 840 bits
Score difference with first non-orthologous sequence - L.thermotolerans:840 P.jiroveci:840

C5E261              	100.00%		L0PH89              	100.00%
Bootstrap support for C5E261 as seed ortholog is 100%.
Bootstrap support for L0PH89 as seed ortholog is 100%.

Group of orthologs #88. Best score 839 bits
Score difference with first non-orthologous sequence - L.thermotolerans:839 P.jiroveci:839

C5DCN7              	100.00%		L0PEQ8              	100.00%
Bootstrap support for C5DCN7 as seed ortholog is 100%.
Bootstrap support for L0PEQ8 as seed ortholog is 100%.

Group of orthologs #89. Best score 837 bits
Score difference with first non-orthologous sequence - L.thermotolerans:262 P.jiroveci:837

C5DH87              	100.00%		L0P9C7              	100.00%
Bootstrap support for C5DH87 as seed ortholog is 100%.
Bootstrap support for L0P9C7 as seed ortholog is 100%.

Group of orthologs #90. Best score 836 bits
Score difference with first non-orthologous sequence - L.thermotolerans:680 P.jiroveci:836

C5DNH3              	100.00%		L0PE26              	100.00%
Bootstrap support for C5DNH3 as seed ortholog is 100%.
Bootstrap support for L0PE26 as seed ortholog is 100%.

Group of orthologs #91. Best score 833 bits
Score difference with first non-orthologous sequence - L.thermotolerans:833 P.jiroveci:833

C5DNA3              	100.00%		L0PDS0              	100.00%
Bootstrap support for C5DNA3 as seed ortholog is 100%.
Bootstrap support for L0PDS0 as seed ortholog is 100%.

Group of orthologs #92. Best score 828 bits
Score difference with first non-orthologous sequence - L.thermotolerans:828 P.jiroveci:828

C5DLI3              	100.00%		L0PE57              	100.00%
Bootstrap support for C5DLI3 as seed ortholog is 100%.
Bootstrap support for L0PE57 as seed ortholog is 100%.

Group of orthologs #93. Best score 826 bits
Score difference with first non-orthologous sequence - L.thermotolerans:826 P.jiroveci:826

C5DIJ7              	100.00%		L0PFF9              	100.00%
Bootstrap support for C5DIJ7 as seed ortholog is 100%.
Bootstrap support for L0PFF9 as seed ortholog is 100%.

Group of orthologs #94. Best score 824 bits
Score difference with first non-orthologous sequence - L.thermotolerans:824 P.jiroveci:824

C5DHV7              	100.00%		L0PFJ0              	100.00%
Bootstrap support for C5DHV7 as seed ortholog is 100%.
Bootstrap support for L0PFJ0 as seed ortholog is 100%.

Group of orthologs #95. Best score 814 bits
Score difference with first non-orthologous sequence - L.thermotolerans:703 P.jiroveci:814

C5DG14              	100.00%		L0PEP7              	100.00%
Bootstrap support for C5DG14 as seed ortholog is 100%.
Bootstrap support for L0PEP7 as seed ortholog is 100%.

Group of orthologs #96. Best score 812 bits
Score difference with first non-orthologous sequence - L.thermotolerans:420 P.jiroveci:307

C5DJP0              	100.00%		L0PB13              	100.00%
Bootstrap support for C5DJP0 as seed ortholog is 100%.
Bootstrap support for L0PB13 as seed ortholog is 100%.

Group of orthologs #97. Best score 809 bits
Score difference with first non-orthologous sequence - L.thermotolerans:809 P.jiroveci:809

C5DIV4              	100.00%		L0PFZ9              	100.00%
Bootstrap support for C5DIV4 as seed ortholog is 100%.
Bootstrap support for L0PFZ9 as seed ortholog is 100%.

Group of orthologs #98. Best score 809 bits
Score difference with first non-orthologous sequence - L.thermotolerans:809 P.jiroveci:809

C5E3N4              	100.00%		L0PF68              	100.00%
Bootstrap support for C5E3N4 as seed ortholog is 100%.
Bootstrap support for L0PF68 as seed ortholog is 100%.

Group of orthologs #99. Best score 805 bits
Score difference with first non-orthologous sequence - L.thermotolerans:805 P.jiroveci:314

C5DE23              	100.00%		L0P833              	100.00%
Bootstrap support for C5DE23 as seed ortholog is 100%.
Bootstrap support for L0P833 as seed ortholog is 100%.

Group of orthologs #100. Best score 805 bits
Score difference with first non-orthologous sequence - L.thermotolerans:805 P.jiroveci:805

C5DLC0              	100.00%		L0PBA5              	100.00%
Bootstrap support for C5DLC0 as seed ortholog is 100%.
Bootstrap support for L0PBA5 as seed ortholog is 100%.

Group of orthologs #101. Best score 804 bits
Score difference with first non-orthologous sequence - L.thermotolerans:804 P.jiroveci:804

C5DBT4              	100.00%		L0P9U5              	100.00%
Bootstrap support for C5DBT4 as seed ortholog is 100%.
Bootstrap support for L0P9U5 as seed ortholog is 100%.

Group of orthologs #102. Best score 803 bits
Score difference with first non-orthologous sequence - L.thermotolerans:707 P.jiroveci:705

C5DDT0              	100.00%		L0PCS2              	100.00%
Bootstrap support for C5DDT0 as seed ortholog is 100%.
Bootstrap support for L0PCS2 as seed ortholog is 100%.

Group of orthologs #103. Best score 798 bits
Score difference with first non-orthologous sequence - L.thermotolerans:798 P.jiroveci:798

C5DIG5              	100.00%		L0PG07              	100.00%
Bootstrap support for C5DIG5 as seed ortholog is 100%.
Bootstrap support for L0PG07 as seed ortholog is 100%.

Group of orthologs #104. Best score 795 bits
Score difference with first non-orthologous sequence - L.thermotolerans:795 P.jiroveci:795

C5DLM5              	100.00%		L0PDK6              	100.00%
Bootstrap support for C5DLM5 as seed ortholog is 100%.
Bootstrap support for L0PDK6 as seed ortholog is 100%.

Group of orthologs #105. Best score 789 bits
Score difference with first non-orthologous sequence - L.thermotolerans:789 P.jiroveci:789

C5DGI2              	100.00%		L0PAS8              	100.00%
Bootstrap support for C5DGI2 as seed ortholog is 100%.
Bootstrap support for L0PAS8 as seed ortholog is 100%.

Group of orthologs #106. Best score 789 bits
Score difference with first non-orthologous sequence - L.thermotolerans:789 P.jiroveci:789

C5DI95              	100.00%		L0P9R9              	100.00%
Bootstrap support for C5DI95 as seed ortholog is 100%.
Bootstrap support for L0P9R9 as seed ortholog is 100%.

Group of orthologs #107. Best score 787 bits
Score difference with first non-orthologous sequence - L.thermotolerans:458 P.jiroveci:525

C5DI28              	100.00%		L0PEK2              	100.00%
Bootstrap support for C5DI28 as seed ortholog is 100%.
Bootstrap support for L0PEK2 as seed ortholog is 100%.

Group of orthologs #108. Best score 786 bits
Score difference with first non-orthologous sequence - L.thermotolerans:786 P.jiroveci:786

C5DBS8              	100.00%		L0PCC4              	100.00%
Bootstrap support for C5DBS8 as seed ortholog is 100%.
Bootstrap support for L0PCC4 as seed ortholog is 100%.

Group of orthologs #109. Best score 785 bits
Score difference with first non-orthologous sequence - L.thermotolerans:785 P.jiroveci:785

C5DDS9              	100.00%		L0PBV5              	100.00%
Bootstrap support for C5DDS9 as seed ortholog is 100%.
Bootstrap support for L0PBV5 as seed ortholog is 100%.

Group of orthologs #110. Best score 779 bits
Score difference with first non-orthologous sequence - L.thermotolerans:779 P.jiroveci:779

C5E2B5              	100.00%		L0P7V0              	100.00%
Bootstrap support for C5E2B5 as seed ortholog is 100%.
Bootstrap support for L0P7V0 as seed ortholog is 100%.

Group of orthologs #111. Best score 776 bits
Score difference with first non-orthologous sequence - L.thermotolerans:776 P.jiroveci:776

C5DEP6              	100.00%		L0PBM4              	100.00%
Bootstrap support for C5DEP6 as seed ortholog is 100%.
Bootstrap support for L0PBM4 as seed ortholog is 100%.

Group of orthologs #112. Best score 776 bits
Score difference with first non-orthologous sequence - L.thermotolerans:577 P.jiroveci:776

C5DKV7              	100.00%		L0P945              	100.00%
Bootstrap support for C5DKV7 as seed ortholog is 100%.
Bootstrap support for L0P945 as seed ortholog is 100%.

Group of orthologs #113. Best score 774 bits
Score difference with first non-orthologous sequence - L.thermotolerans:774 P.jiroveci:774

C5DNF1              	100.00%		L0PBH3              	100.00%
Bootstrap support for C5DNF1 as seed ortholog is 100%.
Bootstrap support for L0PBH3 as seed ortholog is 100%.

Group of orthologs #114. Best score 765 bits
Score difference with first non-orthologous sequence - L.thermotolerans:238 P.jiroveci:765

C5DGY0              	100.00%		L0PBL0              	100.00%
Bootstrap support for C5DGY0 as seed ortholog is 99%.
Bootstrap support for L0PBL0 as seed ortholog is 100%.

Group of orthologs #115. Best score 764 bits
Score difference with first non-orthologous sequence - L.thermotolerans:764 P.jiroveci:359

C5DNH8              	100.00%		L0P8L4              	100.00%
Bootstrap support for C5DNH8 as seed ortholog is 100%.
Bootstrap support for L0P8L4 as seed ortholog is 100%.

Group of orthologs #116. Best score 757 bits
Score difference with first non-orthologous sequence - L.thermotolerans:695 P.jiroveci:757

C5DEM4              	100.00%		L0PDM6              	100.00%
Bootstrap support for C5DEM4 as seed ortholog is 100%.
Bootstrap support for L0PDM6 as seed ortholog is 100%.

Group of orthologs #117. Best score 757 bits
Score difference with first non-orthologous sequence - L.thermotolerans:757 P.jiroveci:757

C5DLW6              	100.00%		L0PA93              	100.00%
Bootstrap support for C5DLW6 as seed ortholog is 100%.
Bootstrap support for L0PA93 as seed ortholog is 100%.

Group of orthologs #118. Best score 755 bits
Score difference with first non-orthologous sequence - L.thermotolerans:755 P.jiroveci:755

C5DEP3              	100.00%		L0P7T0              	100.00%
Bootstrap support for C5DEP3 as seed ortholog is 100%.
Bootstrap support for L0P7T0 as seed ortholog is 100%.

Group of orthologs #119. Best score 750 bits
Score difference with first non-orthologous sequence - L.thermotolerans:750 P.jiroveci:750

C5DCM3              	100.00%		L0PC79              	100.00%
Bootstrap support for C5DCM3 as seed ortholog is 100%.
Bootstrap support for L0PC79 as seed ortholog is 100%.

Group of orthologs #120. Best score 748 bits
Score difference with first non-orthologous sequence - L.thermotolerans:423 P.jiroveci:168

C5DJC0              	100.00%		L0P8C8              	100.00%
Bootstrap support for C5DJC0 as seed ortholog is 100%.
Bootstrap support for L0P8C8 as seed ortholog is 99%.

Group of orthologs #121. Best score 746 bits
Score difference with first non-orthologous sequence - L.thermotolerans:746 P.jiroveci:746

C5DLC4              	100.00%		L0PF66              	100.00%
Bootstrap support for C5DLC4 as seed ortholog is 100%.
Bootstrap support for L0PF66 as seed ortholog is 100%.

Group of orthologs #122. Best score 743 bits
Score difference with first non-orthologous sequence - L.thermotolerans:743 P.jiroveci:743

C5DJ72              	100.00%		L0PAP1              	100.00%
Bootstrap support for C5DJ72 as seed ortholog is 100%.
Bootstrap support for L0PAP1 as seed ortholog is 100%.

Group of orthologs #123. Best score 742 bits
Score difference with first non-orthologous sequence - L.thermotolerans:742 P.jiroveci:742

C5DH74              	100.00%		L0PC65              	100.00%
Bootstrap support for C5DH74 as seed ortholog is 100%.
Bootstrap support for L0PC65 as seed ortholog is 100%.

Group of orthologs #124. Best score 741 bits
Score difference with first non-orthologous sequence - L.thermotolerans:303 P.jiroveci:273

C5DBW7              	100.00%		L0PAJ7              	100.00%
Bootstrap support for C5DBW7 as seed ortholog is 100%.
Bootstrap support for L0PAJ7 as seed ortholog is 99%.

Group of orthologs #125. Best score 740 bits
Score difference with first non-orthologous sequence - L.thermotolerans:740 P.jiroveci:740

C5DCH2              	100.00%		L0P9J9              	100.00%
Bootstrap support for C5DCH2 as seed ortholog is 100%.
Bootstrap support for L0P9J9 as seed ortholog is 100%.

Group of orthologs #126. Best score 740 bits
Score difference with first non-orthologous sequence - L.thermotolerans:740 P.jiroveci:740

C5DD00              	100.00%		L0PBJ8              	100.00%
Bootstrap support for C5DD00 as seed ortholog is 100%.
Bootstrap support for L0PBJ8 as seed ortholog is 100%.

Group of orthologs #127. Best score 736 bits
Score difference with first non-orthologous sequence - L.thermotolerans:736 P.jiroveci:736

C5DI18              	100.00%		L0PBN0              	100.00%
Bootstrap support for C5DI18 as seed ortholog is 100%.
Bootstrap support for L0PBN0 as seed ortholog is 100%.

Group of orthologs #128. Best score 728 bits
Score difference with first non-orthologous sequence - L.thermotolerans:545 P.jiroveci:728

C5DCD6              	100.00%		L0P976              	100.00%
Bootstrap support for C5DCD6 as seed ortholog is 100%.
Bootstrap support for L0P976 as seed ortholog is 100%.

Group of orthologs #129. Best score 725 bits
Score difference with first non-orthologous sequence - L.thermotolerans:416 P.jiroveci:591

C5DD78              	100.00%		L0P8E7              	100.00%
Bootstrap support for C5DD78 as seed ortholog is 100%.
Bootstrap support for L0P8E7 as seed ortholog is 100%.

Group of orthologs #130. Best score 725 bits
Score difference with first non-orthologous sequence - L.thermotolerans:725 P.jiroveci:725

C5E3K4              	100.00%		L0P8Y6              	100.00%
Bootstrap support for C5E3K4 as seed ortholog is 100%.
Bootstrap support for L0P8Y6 as seed ortholog is 100%.

Group of orthologs #131. Best score 723 bits
Score difference with first non-orthologous sequence - L.thermotolerans:723 P.jiroveci:723

C5DM71              	100.00%		L0PCL9              	100.00%
Bootstrap support for C5DM71 as seed ortholog is 100%.
Bootstrap support for L0PCL9 as seed ortholog is 100%.

Group of orthologs #132. Best score 722 bits
Score difference with first non-orthologous sequence - L.thermotolerans:722 P.jiroveci:722

C5DDC0              	100.00%		L0PAX4              	100.00%
Bootstrap support for C5DDC0 as seed ortholog is 100%.
Bootstrap support for L0PAX4 as seed ortholog is 100%.

Group of orthologs #133. Best score 720 bits
Score difference with first non-orthologous sequence - L.thermotolerans:486 P.jiroveci:414

C5DE02              	100.00%		L0PFG7              	100.00%
Bootstrap support for C5DE02 as seed ortholog is 100%.
Bootstrap support for L0PFG7 as seed ortholog is 100%.

Group of orthologs #134. Best score 720 bits
Score difference with first non-orthologous sequence - L.thermotolerans:720 P.jiroveci:720

C5DMW8              	100.00%		L0PA41              	100.00%
Bootstrap support for C5DMW8 as seed ortholog is 100%.
Bootstrap support for L0PA41 as seed ortholog is 100%.

Group of orthologs #135. Best score 719 bits
Score difference with first non-orthologous sequence - L.thermotolerans:719 P.jiroveci:719

C5E2C0              	100.00%		L0PB98              	100.00%
Bootstrap support for C5E2C0 as seed ortholog is 100%.
Bootstrap support for L0PB98 as seed ortholog is 100%.

Group of orthologs #136. Best score 713 bits
Score difference with first non-orthologous sequence - L.thermotolerans:713 P.jiroveci:713

C5DC36              	100.00%		L0P9W2              	100.00%
Bootstrap support for C5DC36 as seed ortholog is 100%.
Bootstrap support for L0P9W2 as seed ortholog is 100%.

Group of orthologs #137. Best score 710 bits
Score difference with first non-orthologous sequence - L.thermotolerans:354 P.jiroveci:710

C5DNP4              	100.00%		L0PBR4              	100.00%
Bootstrap support for C5DNP4 as seed ortholog is 100%.
Bootstrap support for L0PBR4 as seed ortholog is 100%.

Group of orthologs #138. Best score 710 bits
Score difference with first non-orthologous sequence - L.thermotolerans:538 P.jiroveci:710

C5E335              	100.00%		L0PC93              	100.00%
Bootstrap support for C5E335 as seed ortholog is 100%.
Bootstrap support for L0PC93 as seed ortholog is 100%.

Group of orthologs #139. Best score 706 bits
Score difference with first non-orthologous sequence - L.thermotolerans:482 P.jiroveci:706

C5DDN9              	100.00%		L0PGA5              	100.00%
Bootstrap support for C5DDN9 as seed ortholog is 100%.
Bootstrap support for L0PGA5 as seed ortholog is 100%.

Group of orthologs #140. Best score 705 bits
Score difference with first non-orthologous sequence - L.thermotolerans:705 P.jiroveci:705

C5DF65              	100.00%		L0PAQ1              	100.00%
Bootstrap support for C5DF65 as seed ortholog is 100%.
Bootstrap support for L0PAQ1 as seed ortholog is 100%.

Group of orthologs #141. Best score 701 bits
Score difference with first non-orthologous sequence - L.thermotolerans:478 P.jiroveci:701

C5DIV8              	100.00%		L0PG45              	100.00%
Bootstrap support for C5DIV8 as seed ortholog is 100%.
Bootstrap support for L0PG45 as seed ortholog is 100%.

Group of orthologs #142. Best score 698 bits
Score difference with first non-orthologous sequence - L.thermotolerans:698 P.jiroveci:698

C5DLH1              	100.00%		L0PH85              	100.00%
Bootstrap support for C5DLH1 as seed ortholog is 100%.
Bootstrap support for L0PH85 as seed ortholog is 100%.

Group of orthologs #143. Best score 696 bits
Score difference with first non-orthologous sequence - L.thermotolerans:696 P.jiroveci:696

C5DIK5              	100.00%		L0PCV7              	100.00%
Bootstrap support for C5DIK5 as seed ortholog is 100%.
Bootstrap support for L0PCV7 as seed ortholog is 100%.

Group of orthologs #144. Best score 695 bits
Score difference with first non-orthologous sequence - L.thermotolerans:695 P.jiroveci:695

C5DML2              	100.00%		L0PAS3              	100.00%
Bootstrap support for C5DML2 as seed ortholog is 100%.
Bootstrap support for L0PAS3 as seed ortholog is 100%.

Group of orthologs #145. Best score 695 bits
Score difference with first non-orthologous sequence - L.thermotolerans:695 P.jiroveci:399

C5DHY0              	100.00%		L0PFW1              	100.00%
Bootstrap support for C5DHY0 as seed ortholog is 100%.
Bootstrap support for L0PFW1 as seed ortholog is 100%.

Group of orthologs #146. Best score 691 bits
Score difference with first non-orthologous sequence - L.thermotolerans:691 P.jiroveci:136

C5DJ60              	100.00%		L0P8X7              	100.00%
Bootstrap support for C5DJ60 as seed ortholog is 100%.
Bootstrap support for L0P8X7 as seed ortholog is 98%.

Group of orthologs #147. Best score 691 bits
Score difference with first non-orthologous sequence - L.thermotolerans:524 P.jiroveci:691

C5DMF5              	100.00%		L0PER6              	100.00%
Bootstrap support for C5DMF5 as seed ortholog is 100%.
Bootstrap support for L0PER6 as seed ortholog is 100%.

Group of orthologs #148. Best score 689 bits
Score difference with first non-orthologous sequence - L.thermotolerans:689 P.jiroveci:689

C5DEM0              	100.00%		L0PED9              	100.00%
Bootstrap support for C5DEM0 as seed ortholog is 100%.
Bootstrap support for L0PED9 as seed ortholog is 100%.

Group of orthologs #149. Best score 688 bits
Score difference with first non-orthologous sequence - L.thermotolerans:354 P.jiroveci:608

C5DEU1              	100.00%		L0PDY0              	100.00%
Bootstrap support for C5DEU1 as seed ortholog is 100%.
Bootstrap support for L0PDY0 as seed ortholog is 100%.

Group of orthologs #150. Best score 688 bits
Score difference with first non-orthologous sequence - L.thermotolerans:688 P.jiroveci:688

C5DLB7              	100.00%		L0PA45              	100.00%
Bootstrap support for C5DLB7 as seed ortholog is 100%.
Bootstrap support for L0PA45 as seed ortholog is 100%.

Group of orthologs #151. Best score 685 bits
Score difference with first non-orthologous sequence - L.thermotolerans:298 P.jiroveci:480

C5DG43              	100.00%		L0PGE8              	100.00%
Bootstrap support for C5DG43 as seed ortholog is 100%.
Bootstrap support for L0PGE8 as seed ortholog is 100%.

Group of orthologs #152. Best score 684 bits
Score difference with first non-orthologous sequence - L.thermotolerans:684 P.jiroveci:684

C5E2N2              	100.00%		L0PG19              	100.00%
Bootstrap support for C5E2N2 as seed ortholog is 100%.
Bootstrap support for L0PG19 as seed ortholog is 100%.

Group of orthologs #153. Best score 682 bits
Score difference with first non-orthologous sequence - L.thermotolerans:682 P.jiroveci:682

C5DDB2              	100.00%		L0PDG3              	100.00%
Bootstrap support for C5DDB2 as seed ortholog is 100%.
Bootstrap support for L0PDG3 as seed ortholog is 100%.

Group of orthologs #154. Best score 680 bits
Score difference with first non-orthologous sequence - L.thermotolerans:680 P.jiroveci:680

C5DFK5              	100.00%		L0PB44              	100.00%
Bootstrap support for C5DFK5 as seed ortholog is 100%.
Bootstrap support for L0PB44 as seed ortholog is 100%.

Group of orthologs #155. Best score 678 bits
Score difference with first non-orthologous sequence - L.thermotolerans:678 P.jiroveci:678

C5DLN3              	100.00%		L0P6X8              	100.00%
Bootstrap support for C5DLN3 as seed ortholog is 100%.
Bootstrap support for L0P6X8 as seed ortholog is 100%.

Group of orthologs #156. Best score 677 bits
Score difference with first non-orthologous sequence - L.thermotolerans:677 P.jiroveci:677

C5DFK7              	100.00%		L0P7N3              	100.00%
Bootstrap support for C5DFK7 as seed ortholog is 100%.
Bootstrap support for L0P7N3 as seed ortholog is 100%.

Group of orthologs #157. Best score 674 bits
Score difference with first non-orthologous sequence - L.thermotolerans:674 P.jiroveci:674

C5E3M7              	100.00%		L0P7V2              	100.00%
Bootstrap support for C5E3M7 as seed ortholog is 100%.
Bootstrap support for L0P7V2 as seed ortholog is 100%.

Group of orthologs #158. Best score 670 bits
Score difference with first non-orthologous sequence - L.thermotolerans:670 P.jiroveci:670

C5DIY5              	100.00%		L0PF98              	100.00%
Bootstrap support for C5DIY5 as seed ortholog is 100%.
Bootstrap support for L0PF98 as seed ortholog is 100%.

Group of orthologs #159. Best score 667 bits
Score difference with first non-orthologous sequence - L.thermotolerans:667 P.jiroveci:667

C5DKB1              	100.00%		L0PC44              	100.00%
Bootstrap support for C5DKB1 as seed ortholog is 100%.
Bootstrap support for L0PC44 as seed ortholog is 100%.

Group of orthologs #160. Best score 666 bits
Score difference with first non-orthologous sequence - L.thermotolerans:519 P.jiroveci:666

C5DIN4              	100.00%		L0PHE9              	100.00%
Bootstrap support for C5DIN4 as seed ortholog is 100%.
Bootstrap support for L0PHE9 as seed ortholog is 100%.

Group of orthologs #161. Best score 664 bits
Score difference with first non-orthologous sequence - L.thermotolerans:420 P.jiroveci:573

C5DCW9              	100.00%		L0PB67              	100.00%
Bootstrap support for C5DCW9 as seed ortholog is 100%.
Bootstrap support for L0PB67 as seed ortholog is 100%.

Group of orthologs #162. Best score 661 bits
Score difference with first non-orthologous sequence - L.thermotolerans:661 P.jiroveci:661

C5DII0              	100.00%		L0P8P8              	100.00%
Bootstrap support for C5DII0 as seed ortholog is 100%.
Bootstrap support for L0P8P8 as seed ortholog is 100%.

Group of orthologs #163. Best score 660 bits
Score difference with first non-orthologous sequence - L.thermotolerans:660 P.jiroveci:660

C5DNJ7              	100.00%		L0PDI6              	100.00%
Bootstrap support for C5DNJ7 as seed ortholog is 100%.
Bootstrap support for L0PDI6 as seed ortholog is 100%.

Group of orthologs #164. Best score 659 bits
Score difference with first non-orthologous sequence - L.thermotolerans:659 P.jiroveci:659

C5DFP3              	100.00%		L0PAN9              	100.00%
                    	       		L0PID8              	80.92%
Bootstrap support for C5DFP3 as seed ortholog is 100%.
Bootstrap support for L0PAN9 as seed ortholog is 100%.

Group of orthologs #165. Best score 658 bits
Score difference with first non-orthologous sequence - L.thermotolerans:658 P.jiroveci:658

C5DD65              	100.00%		L0PHB7              	100.00%
Bootstrap support for C5DD65 as seed ortholog is 100%.
Bootstrap support for L0PHB7 as seed ortholog is 100%.

Group of orthologs #166. Best score 656 bits
Score difference with first non-orthologous sequence - L.thermotolerans:656 P.jiroveci:656

C5DH29              	100.00%		L0PFF6              	100.00%
Bootstrap support for C5DH29 as seed ortholog is 100%.
Bootstrap support for L0PFF6 as seed ortholog is 100%.

Group of orthologs #167. Best score 656 bits
Score difference with first non-orthologous sequence - L.thermotolerans:278 P.jiroveci:283

C5DNP7              	100.00%		L0PA91              	100.00%
Bootstrap support for C5DNP7 as seed ortholog is 100%.
Bootstrap support for L0PA91 as seed ortholog is 100%.

Group of orthologs #168. Best score 653 bits
Score difference with first non-orthologous sequence - L.thermotolerans:653 P.jiroveci:653

C5DJW0              	100.00%		L0PEZ0              	100.00%
Bootstrap support for C5DJW0 as seed ortholog is 100%.
Bootstrap support for L0PEZ0 as seed ortholog is 100%.

Group of orthologs #169. Best score 651 bits
Score difference with first non-orthologous sequence - L.thermotolerans:651 P.jiroveci:651

C5DD05              	100.00%		L0PBW1              	100.00%
Bootstrap support for C5DD05 as seed ortholog is 100%.
Bootstrap support for L0PBW1 as seed ortholog is 100%.

Group of orthologs #170. Best score 650 bits
Score difference with first non-orthologous sequence - L.thermotolerans:650 P.jiroveci:650

C5E3B9              	100.00%		L0P8W6              	100.00%
Bootstrap support for C5E3B9 as seed ortholog is 100%.
Bootstrap support for L0P8W6 as seed ortholog is 100%.

Group of orthologs #171. Best score 645 bits
Score difference with first non-orthologous sequence - L.thermotolerans:645 P.jiroveci:645

C5DLH9              	100.00%		L0PD32              	100.00%
                    	       		L0PD26              	93.54%
Bootstrap support for C5DLH9 as seed ortholog is 100%.
Bootstrap support for L0PD32 as seed ortholog is 100%.

Group of orthologs #172. Best score 638 bits
Score difference with first non-orthologous sequence - L.thermotolerans:638 P.jiroveci:638

C5DJK2              	100.00%		L0PA85              	100.00%
Bootstrap support for C5DJK2 as seed ortholog is 100%.
Bootstrap support for L0PA85 as seed ortholog is 100%.

Group of orthologs #173. Best score 638 bits
Score difference with first non-orthologous sequence - L.thermotolerans:638 P.jiroveci:638

C5DLI2              	100.00%		L0PCP1              	100.00%
Bootstrap support for C5DLI2 as seed ortholog is 100%.
Bootstrap support for L0PCP1 as seed ortholog is 100%.

Group of orthologs #174. Best score 636 bits
Score difference with first non-orthologous sequence - L.thermotolerans:433 P.jiroveci:523

C5E223              	100.00%		L0P853              	100.00%
                    	       		L0P8M8              	50.27%
Bootstrap support for C5E223 as seed ortholog is 100%.
Bootstrap support for L0P853 as seed ortholog is 100%.

Group of orthologs #175. Best score 634 bits
Score difference with first non-orthologous sequence - L.thermotolerans:300 P.jiroveci:634

C5DFR6              	100.00%		L0P8U1              	100.00%
Bootstrap support for C5DFR6 as seed ortholog is 100%.
Bootstrap support for L0P8U1 as seed ortholog is 100%.

Group of orthologs #176. Best score 634 bits
Score difference with first non-orthologous sequence - L.thermotolerans:634 P.jiroveci:634

C5DFA7              	100.00%		L0PCD5              	100.00%
Bootstrap support for C5DFA7 as seed ortholog is 100%.
Bootstrap support for L0PCD5 as seed ortholog is 100%.

Group of orthologs #177. Best score 633 bits
Score difference with first non-orthologous sequence - L.thermotolerans:633 P.jiroveci:633

C5E2V1              	100.00%		L0PAA4              	100.00%
Bootstrap support for C5E2V1 as seed ortholog is 100%.
Bootstrap support for L0PAA4 as seed ortholog is 100%.

Group of orthologs #178. Best score 632 bits
Score difference with first non-orthologous sequence - L.thermotolerans:479 P.jiroveci:632

C5DG47              	100.00%		L0P718              	100.00%
Bootstrap support for C5DG47 as seed ortholog is 100%.
Bootstrap support for L0P718 as seed ortholog is 100%.

Group of orthologs #179. Best score 632 bits
Score difference with first non-orthologous sequence - L.thermotolerans:632 P.jiroveci:632

C5DFG7              	100.00%		L0PCA7              	100.00%
Bootstrap support for C5DFG7 as seed ortholog is 100%.
Bootstrap support for L0PCA7 as seed ortholog is 100%.

Group of orthologs #180. Best score 629 bits
Score difference with first non-orthologous sequence - L.thermotolerans:629 P.jiroveci:629

C5DLJ4              	100.00%		L0PDJ1              	100.00%
Bootstrap support for C5DLJ4 as seed ortholog is 100%.
Bootstrap support for L0PDJ1 as seed ortholog is 100%.

Group of orthologs #181. Best score 628 bits
Score difference with first non-orthologous sequence - L.thermotolerans:490 P.jiroveci:628

C5DKY8              	100.00%		L0PGS4              	100.00%
Bootstrap support for C5DKY8 as seed ortholog is 100%.
Bootstrap support for L0PGS4 as seed ortholog is 100%.

Group of orthologs #182. Best score 624 bits
Score difference with first non-orthologous sequence - L.thermotolerans:624 P.jiroveci:624

C5DBD6              	100.00%		L0P8M6              	100.00%
Bootstrap support for C5DBD6 as seed ortholog is 100%.
Bootstrap support for L0P8M6 as seed ortholog is 100%.

Group of orthologs #183. Best score 621 bits
Score difference with first non-orthologous sequence - L.thermotolerans:621 P.jiroveci:621

C5DBK4              	100.00%		L0PFT7              	100.00%
Bootstrap support for C5DBK4 as seed ortholog is 100%.
Bootstrap support for L0PFT7 as seed ortholog is 100%.

Group of orthologs #184. Best score 619 bits
Score difference with first non-orthologous sequence - L.thermotolerans:619 P.jiroveci:619

C5DFC7              	100.00%		L0PBN1              	100.00%
Bootstrap support for C5DFC7 as seed ortholog is 100%.
Bootstrap support for L0PBN1 as seed ortholog is 100%.

Group of orthologs #185. Best score 619 bits
Score difference with first non-orthologous sequence - L.thermotolerans:619 P.jiroveci:619

C5E3F7              	100.00%		L0PAG2              	100.00%
Bootstrap support for C5E3F7 as seed ortholog is 100%.
Bootstrap support for L0PAG2 as seed ortholog is 100%.

Group of orthologs #186. Best score 617 bits
Score difference with first non-orthologous sequence - L.thermotolerans:617 P.jiroveci:617

C5DHB0              	100.00%		L0PCW8              	100.00%
Bootstrap support for C5DHB0 as seed ortholog is 100%.
Bootstrap support for L0PCW8 as seed ortholog is 100%.

Group of orthologs #187. Best score 616 bits
Score difference with first non-orthologous sequence - L.thermotolerans:616 P.jiroveci:616

C5E3I8              	100.00%		L0PEL1              	100.00%
Bootstrap support for C5E3I8 as seed ortholog is 100%.
Bootstrap support for L0PEL1 as seed ortholog is 100%.

Group of orthologs #188. Best score 615 bits
Score difference with first non-orthologous sequence - L.thermotolerans:615 P.jiroveci:615

C5DKY0              	100.00%		L0PBW7              	100.00%
Bootstrap support for C5DKY0 as seed ortholog is 100%.
Bootstrap support for L0PBW7 as seed ortholog is 100%.

Group of orthologs #189. Best score 604 bits
Score difference with first non-orthologous sequence - L.thermotolerans:604 P.jiroveci:604

C5E2R4              	100.00%		L0P9G2              	100.00%
Bootstrap support for C5E2R4 as seed ortholog is 100%.
Bootstrap support for L0P9G2 as seed ortholog is 100%.

Group of orthologs #190. Best score 603 bits
Score difference with first non-orthologous sequence - L.thermotolerans:603 P.jiroveci:603

C5DJM1              	100.00%		L0P9D4              	100.00%
Bootstrap support for C5DJM1 as seed ortholog is 100%.
Bootstrap support for L0P9D4 as seed ortholog is 100%.

Group of orthologs #191. Best score 602 bits
Score difference with first non-orthologous sequence - L.thermotolerans:203 P.jiroveci:77

C5DJW6              	100.00%		L0PGY9              	100.00%
Bootstrap support for C5DJW6 as seed ortholog is 100%.
Bootstrap support for L0PGY9 as seed ortholog is 99%.

Group of orthologs #192. Best score 601 bits
Score difference with first non-orthologous sequence - L.thermotolerans:601 P.jiroveci:601

C5DGL8              	100.00%		L0PE98              	100.00%
Bootstrap support for C5DGL8 as seed ortholog is 100%.
Bootstrap support for L0PE98 as seed ortholog is 100%.

Group of orthologs #193. Best score 597 bits
Score difference with first non-orthologous sequence - L.thermotolerans:597 P.jiroveci:597

C5E3E0              	100.00%		L0PDR3              	100.00%
Bootstrap support for C5E3E0 as seed ortholog is 100%.
Bootstrap support for L0PDR3 as seed ortholog is 100%.

Group of orthologs #194. Best score 596 bits
Score difference with first non-orthologous sequence - L.thermotolerans:596 P.jiroveci:596

C5DK69              	100.00%		L0PDP2              	100.00%
Bootstrap support for C5DK69 as seed ortholog is 100%.
Bootstrap support for L0PDP2 as seed ortholog is 100%.

Group of orthologs #195. Best score 595 bits
Score difference with first non-orthologous sequence - L.thermotolerans:595 P.jiroveci:595

C5DL12              	100.00%		L0P7N1              	100.00%
Bootstrap support for C5DL12 as seed ortholog is 100%.
Bootstrap support for L0P7N1 as seed ortholog is 100%.

Group of orthologs #196. Best score 591 bits
Score difference with first non-orthologous sequence - L.thermotolerans:591 P.jiroveci:591

C5DJD4              	100.00%		L0PDU5              	100.00%
Bootstrap support for C5DJD4 as seed ortholog is 100%.
Bootstrap support for L0PDU5 as seed ortholog is 100%.

Group of orthologs #197. Best score 589 bits
Score difference with first non-orthologous sequence - L.thermotolerans:402 P.jiroveci:589

C5DBI9              	100.00%		L0P7Y5              	100.00%
Bootstrap support for C5DBI9 as seed ortholog is 100%.
Bootstrap support for L0P7Y5 as seed ortholog is 100%.

Group of orthologs #198. Best score 589 bits
Score difference with first non-orthologous sequence - L.thermotolerans:589 P.jiroveci:440

C5DIC1              	100.00%		L0PCD8              	100.00%
Bootstrap support for C5DIC1 as seed ortholog is 100%.
Bootstrap support for L0PCD8 as seed ortholog is 100%.

Group of orthologs #199. Best score 589 bits
Score difference with first non-orthologous sequence - L.thermotolerans:29 P.jiroveci:589

C5DNN2              	100.00%		L0PCX1              	100.00%
Bootstrap support for C5DNN2 as seed ortholog is 77%.
Bootstrap support for L0PCX1 as seed ortholog is 100%.

Group of orthologs #200. Best score 589 bits
Score difference with first non-orthologous sequence - L.thermotolerans:589 P.jiroveci:589

C5E205              	100.00%		L0PHY6              	100.00%
Bootstrap support for C5E205 as seed ortholog is 100%.
Bootstrap support for L0PHY6 as seed ortholog is 100%.

Group of orthologs #201. Best score 581 bits
Score difference with first non-orthologous sequence - L.thermotolerans:581 P.jiroveci:581

C5DN84              	100.00%		L0PBG8              	100.00%
Bootstrap support for C5DN84 as seed ortholog is 100%.
Bootstrap support for L0PBG8 as seed ortholog is 100%.

Group of orthologs #202. Best score 576 bits
Score difference with first non-orthologous sequence - L.thermotolerans:507 P.jiroveci:502

C5DC02              	100.00%		L0P8C2              	100.00%
Bootstrap support for C5DC02 as seed ortholog is 100%.
Bootstrap support for L0P8C2 as seed ortholog is 100%.

Group of orthologs #203. Best score 576 bits
Score difference with first non-orthologous sequence - L.thermotolerans:201 P.jiroveci:576

C5DHQ8              	100.00%		L0PBH4              	100.00%
Bootstrap support for C5DHQ8 as seed ortholog is 100%.
Bootstrap support for L0PBH4 as seed ortholog is 100%.

Group of orthologs #204. Best score 571 bits
Score difference with first non-orthologous sequence - L.thermotolerans:502 P.jiroveci:571

C5E310              	100.00%		L0P7R1              	100.00%
Bootstrap support for C5E310 as seed ortholog is 100%.
Bootstrap support for L0P7R1 as seed ortholog is 100%.

Group of orthologs #205. Best score 570 bits
Score difference with first non-orthologous sequence - L.thermotolerans:570 P.jiroveci:570

C5DDR9              	100.00%		L0PGV5              	100.00%
Bootstrap support for C5DDR9 as seed ortholog is 100%.
Bootstrap support for L0PGV5 as seed ortholog is 100%.

Group of orthologs #206. Best score 570 bits
Score difference with first non-orthologous sequence - L.thermotolerans:570 P.jiroveci:570

C5E2D4              	100.00%		L0P7P1              	100.00%
Bootstrap support for C5E2D4 as seed ortholog is 100%.
Bootstrap support for L0P7P1 as seed ortholog is 100%.

Group of orthologs #207. Best score 568 bits
Score difference with first non-orthologous sequence - L.thermotolerans:568 P.jiroveci:568

C5DHT2              	100.00%		L0PH33              	100.00%
Bootstrap support for C5DHT2 as seed ortholog is 100%.
Bootstrap support for L0PH33 as seed ortholog is 100%.

Group of orthologs #208. Best score 567 bits
Score difference with first non-orthologous sequence - L.thermotolerans:567 P.jiroveci:567

C5DN57              	100.00%		L0P802              	100.00%
Bootstrap support for C5DN57 as seed ortholog is 100%.
Bootstrap support for L0P802 as seed ortholog is 100%.

Group of orthologs #209. Best score 566 bits
Score difference with first non-orthologous sequence - L.thermotolerans:566 P.jiroveci:566

C5DEB8              	100.00%		L0PAU1              	100.00%
Bootstrap support for C5DEB8 as seed ortholog is 100%.
Bootstrap support for L0PAU1 as seed ortholog is 100%.

Group of orthologs #210. Best score 566 bits
Score difference with first non-orthologous sequence - L.thermotolerans:320 P.jiroveci:566

C5DIM4              	100.00%		L0PBI1              	100.00%
Bootstrap support for C5DIM4 as seed ortholog is 100%.
Bootstrap support for L0PBI1 as seed ortholog is 100%.

Group of orthologs #211. Best score 563 bits
Score difference with first non-orthologous sequence - L.thermotolerans:563 P.jiroveci:563

C5DG72              	100.00%		L0PG37              	100.00%
Bootstrap support for C5DG72 as seed ortholog is 100%.
Bootstrap support for L0PG37 as seed ortholog is 100%.

Group of orthologs #212. Best score 560 bits
Score difference with first non-orthologous sequence - L.thermotolerans:560 P.jiroveci:560

C5DN01              	100.00%		L0PAC0              	100.00%
Bootstrap support for C5DN01 as seed ortholog is 100%.
Bootstrap support for L0PAC0 as seed ortholog is 100%.

Group of orthologs #213. Best score 560 bits
Score difference with first non-orthologous sequence - L.thermotolerans:560 P.jiroveci:560

C5E3F6              	100.00%		L0PEL0              	100.00%
Bootstrap support for C5E3F6 as seed ortholog is 100%.
Bootstrap support for L0PEL0 as seed ortholog is 100%.

Group of orthologs #214. Best score 556 bits
Score difference with first non-orthologous sequence - L.thermotolerans:556 P.jiroveci:556

C5DMJ5              	100.00%		L0P921              	100.00%
Bootstrap support for C5DMJ5 as seed ortholog is 100%.
Bootstrap support for L0P921 as seed ortholog is 100%.

Group of orthologs #215. Best score 555 bits
Score difference with first non-orthologous sequence - L.thermotolerans:555 P.jiroveci:555

C5DD99              	100.00%		L0PA94              	100.00%
Bootstrap support for C5DD99 as seed ortholog is 100%.
Bootstrap support for L0PA94 as seed ortholog is 100%.

Group of orthologs #216. Best score 549 bits
Score difference with first non-orthologous sequence - L.thermotolerans:549 P.jiroveci:549

C5DC44              	100.00%		L0PCS3              	100.00%
Bootstrap support for C5DC44 as seed ortholog is 100%.
Bootstrap support for L0PCS3 as seed ortholog is 100%.

Group of orthologs #217. Best score 548 bits
Score difference with first non-orthologous sequence - L.thermotolerans:110 P.jiroveci:548

C5DDB0              	100.00%		L0P905              	100.00%
Bootstrap support for C5DDB0 as seed ortholog is 95%.
Bootstrap support for L0P905 as seed ortholog is 100%.

Group of orthologs #218. Best score 547 bits
Score difference with first non-orthologous sequence - L.thermotolerans:547 P.jiroveci:547

C5DMN5              	100.00%		L0PGN2              	100.00%
Bootstrap support for C5DMN5 as seed ortholog is 100%.
Bootstrap support for L0PGN2 as seed ortholog is 100%.

Group of orthologs #219. Best score 546 bits
Score difference with first non-orthologous sequence - L.thermotolerans:487 P.jiroveci:546

C5DGQ6              	100.00%		L0P9C8              	100.00%
Bootstrap support for C5DGQ6 as seed ortholog is 100%.
Bootstrap support for L0P9C8 as seed ortholog is 100%.

Group of orthologs #220. Best score 545 bits
Score difference with first non-orthologous sequence - L.thermotolerans:545 P.jiroveci:545

C5DFY5              	100.00%		L0P9U3              	100.00%
Bootstrap support for C5DFY5 as seed ortholog is 100%.
Bootstrap support for L0P9U3 as seed ortholog is 100%.

Group of orthologs #221. Best score 545 bits
Score difference with first non-orthologous sequence - L.thermotolerans:545 P.jiroveci:545

C5DER4              	100.00%		L0PES7              	100.00%
Bootstrap support for C5DER4 as seed ortholog is 100%.
Bootstrap support for L0PES7 as seed ortholog is 100%.

Group of orthologs #222. Best score 545 bits
Score difference with first non-orthologous sequence - L.thermotolerans:370 P.jiroveci:335

C5DDN8              	100.00%		L0PHE4              	100.00%
Bootstrap support for C5DDN8 as seed ortholog is 100%.
Bootstrap support for L0PHE4 as seed ortholog is 100%.

Group of orthologs #223. Best score 543 bits
Score difference with first non-orthologous sequence - L.thermotolerans:543 P.jiroveci:543

C5DFY2              	100.00%		L0P7N5              	100.00%
Bootstrap support for C5DFY2 as seed ortholog is 100%.
Bootstrap support for L0P7N5 as seed ortholog is 100%.

Group of orthologs #224. Best score 541 bits
Score difference with first non-orthologous sequence - L.thermotolerans:541 P.jiroveci:541

C5DK50              	100.00%		L0PBR9              	100.00%
Bootstrap support for C5DK50 as seed ortholog is 100%.
Bootstrap support for L0PBR9 as seed ortholog is 100%.

Group of orthologs #225. Best score 540 bits
Score difference with first non-orthologous sequence - L.thermotolerans:540 P.jiroveci:540

C5DHR5              	100.00%		L0P8F1              	100.00%
Bootstrap support for C5DHR5 as seed ortholog is 100%.
Bootstrap support for L0P8F1 as seed ortholog is 100%.

Group of orthologs #226. Best score 540 bits
Score difference with first non-orthologous sequence - L.thermotolerans:540 P.jiroveci:540

C5E2V4              	100.00%		L0PG55              	100.00%
Bootstrap support for C5E2V4 as seed ortholog is 100%.
Bootstrap support for L0PG55 as seed ortholog is 100%.

Group of orthologs #227. Best score 538 bits
Score difference with first non-orthologous sequence - L.thermotolerans:538 P.jiroveci:538

C5DM96              	100.00%		L0P773              	100.00%
Bootstrap support for C5DM96 as seed ortholog is 100%.
Bootstrap support for L0P773 as seed ortholog is 100%.

Group of orthologs #228. Best score 538 bits
Score difference with first non-orthologous sequence - L.thermotolerans:360 P.jiroveci:475

C5DN97              	100.00%		L0PC98              	100.00%
Bootstrap support for C5DN97 as seed ortholog is 100%.
Bootstrap support for L0PC98 as seed ortholog is 100%.

Group of orthologs #229. Best score 534 bits
Score difference with first non-orthologous sequence - L.thermotolerans:268 P.jiroveci:270

C5DF01              	100.00%		L0PFY3              	100.00%
Bootstrap support for C5DF01 as seed ortholog is 100%.
Bootstrap support for L0PFY3 as seed ortholog is 100%.

Group of orthologs #230. Best score 533 bits
Score difference with first non-orthologous sequence - L.thermotolerans:403 P.jiroveci:416

C5DMJ6              	100.00%		L0P8F8              	100.00%
Bootstrap support for C5DMJ6 as seed ortholog is 100%.
Bootstrap support for L0P8F8 as seed ortholog is 100%.

Group of orthologs #231. Best score 531 bits
Score difference with first non-orthologous sequence - L.thermotolerans:441 P.jiroveci:531

C5DBC1              	100.00%		L0PAN3              	100.00%
Bootstrap support for C5DBC1 as seed ortholog is 100%.
Bootstrap support for L0PAN3 as seed ortholog is 100%.

Group of orthologs #232. Best score 530 bits
Score difference with first non-orthologous sequence - L.thermotolerans:530 P.jiroveci:530

C5DEW4              	100.00%		L0PE52              	100.00%
                    	       		L0PIN5              	45.07%
Bootstrap support for C5DEW4 as seed ortholog is 100%.
Bootstrap support for L0PE52 as seed ortholog is 100%.

Group of orthologs #233. Best score 530 bits
Score difference with first non-orthologous sequence - L.thermotolerans:530 P.jiroveci:530

C5DG09              	100.00%		L0PEE3              	100.00%
Bootstrap support for C5DG09 as seed ortholog is 100%.
Bootstrap support for L0PEE3 as seed ortholog is 100%.

Group of orthologs #234. Best score 530 bits
Score difference with first non-orthologous sequence - L.thermotolerans:530 P.jiroveci:530

C5E255              	100.00%		L0PFJ5              	100.00%
Bootstrap support for C5E255 as seed ortholog is 100%.
Bootstrap support for L0PFJ5 as seed ortholog is 100%.

Group of orthologs #235. Best score 529 bits
Score difference with first non-orthologous sequence - L.thermotolerans:529 P.jiroveci:529

C5DME1              	100.00%		L0PEM6              	100.00%
Bootstrap support for C5DME1 as seed ortholog is 100%.
Bootstrap support for L0PEM6 as seed ortholog is 100%.

Group of orthologs #236. Best score 528 bits
Score difference with first non-orthologous sequence - L.thermotolerans:528 P.jiroveci:316

C5DLA4              	100.00%		L0PFN9              	100.00%
Bootstrap support for C5DLA4 as seed ortholog is 100%.
Bootstrap support for L0PFN9 as seed ortholog is 100%.

Group of orthologs #237. Best score 528 bits
Score difference with first non-orthologous sequence - L.thermotolerans:528 P.jiroveci:528

C5DNN9              	100.00%		L0PFJ6              	100.00%
Bootstrap support for C5DNN9 as seed ortholog is 100%.
Bootstrap support for L0PFJ6 as seed ortholog is 100%.

Group of orthologs #238. Best score 526 bits
Score difference with first non-orthologous sequence - L.thermotolerans:526 P.jiroveci:526

C5DNN7              	100.00%		L0P7P9              	100.00%
Bootstrap support for C5DNN7 as seed ortholog is 100%.
Bootstrap support for L0P7P9 as seed ortholog is 100%.

Group of orthologs #239. Best score 526 bits
Score difference with first non-orthologous sequence - L.thermotolerans:526 P.jiroveci:526

C5DLW2              	100.00%		L0PCQ7              	100.00%
Bootstrap support for C5DLW2 as seed ortholog is 100%.
Bootstrap support for L0PCQ7 as seed ortholog is 100%.

Group of orthologs #240. Best score 526 bits
Score difference with first non-orthologous sequence - L.thermotolerans:526 P.jiroveci:526

C5E1Z0              	100.00%		L0PEA0              	100.00%
Bootstrap support for C5E1Z0 as seed ortholog is 100%.
Bootstrap support for L0PEA0 as seed ortholog is 100%.

Group of orthologs #241. Best score 522 bits
Score difference with first non-orthologous sequence - L.thermotolerans:324 P.jiroveci:415

C5DM37              	100.00%		L0PFB1              	100.00%
Bootstrap support for C5DM37 as seed ortholog is 100%.
Bootstrap support for L0PFB1 as seed ortholog is 100%.

Group of orthologs #242. Best score 522 bits
Score difference with first non-orthologous sequence - L.thermotolerans:522 P.jiroveci:522

C5E2H8              	100.00%		L0PDD5              	100.00%
Bootstrap support for C5E2H8 as seed ortholog is 100%.
Bootstrap support for L0PDD5 as seed ortholog is 100%.

Group of orthologs #243. Best score 521 bits
Score difference with first non-orthologous sequence - L.thermotolerans:521 P.jiroveci:521

C5DCB2              	100.00%		L0PGC4              	100.00%
Bootstrap support for C5DCB2 as seed ortholog is 100%.
Bootstrap support for L0PGC4 as seed ortholog is 100%.

Group of orthologs #244. Best score 521 bits
Score difference with first non-orthologous sequence - L.thermotolerans:521 P.jiroveci:521

C5DK79              	100.00%		L0PC90              	100.00%
Bootstrap support for C5DK79 as seed ortholog is 100%.
Bootstrap support for L0PC90 as seed ortholog is 100%.

Group of orthologs #245. Best score 519 bits
Score difference with first non-orthologous sequence - L.thermotolerans:519 P.jiroveci:519

C5DE50              	100.00%		L0PBT3              	100.00%
Bootstrap support for C5DE50 as seed ortholog is 100%.
Bootstrap support for L0PBT3 as seed ortholog is 100%.

Group of orthologs #246. Best score 519 bits
Score difference with first non-orthologous sequence - L.thermotolerans:519 P.jiroveci:519

C5DKW7              	100.00%		L0P8R6              	100.00%
Bootstrap support for C5DKW7 as seed ortholog is 100%.
Bootstrap support for L0P8R6 as seed ortholog is 100%.

Group of orthologs #247. Best score 518 bits
Score difference with first non-orthologous sequence - L.thermotolerans:518 P.jiroveci:518

C5E216              	100.00%		L0PFQ5              	100.00%
Bootstrap support for C5E216 as seed ortholog is 100%.
Bootstrap support for L0PFQ5 as seed ortholog is 100%.

Group of orthologs #248. Best score 517 bits
Score difference with first non-orthologous sequence - L.thermotolerans:517 P.jiroveci:517

C5DE10              	100.00%		L0PCY5              	100.00%
Bootstrap support for C5DE10 as seed ortholog is 100%.
Bootstrap support for L0PCY5 as seed ortholog is 100%.

Group of orthologs #249. Best score 515 bits
Score difference with first non-orthologous sequence - L.thermotolerans:515 P.jiroveci:515

C5DHU9              	100.00%		L0PHJ7              	100.00%
Bootstrap support for C5DHU9 as seed ortholog is 100%.
Bootstrap support for L0PHJ7 as seed ortholog is 100%.

Group of orthologs #250. Best score 514 bits
Score difference with first non-orthologous sequence - L.thermotolerans:514 P.jiroveci:514

C5E1Y2              	100.00%		L0P8Z3              	100.00%
Bootstrap support for C5E1Y2 as seed ortholog is 100%.
Bootstrap support for L0P8Z3 as seed ortholog is 100%.

Group of orthologs #251. Best score 514 bits
Score difference with first non-orthologous sequence - L.thermotolerans:514 P.jiroveci:514

C5E2Z8              	100.00%		L0PBT8              	100.00%
Bootstrap support for C5E2Z8 as seed ortholog is 100%.
Bootstrap support for L0PBT8 as seed ortholog is 100%.

Group of orthologs #252. Best score 513 bits
Score difference with first non-orthologous sequence - L.thermotolerans:286 P.jiroveci:513

C5DEG0              	100.00%		L0P6W8              	100.00%
                    	       		L0PH46              	100.00%
Bootstrap support for C5DEG0 as seed ortholog is 100%.
Bootstrap support for L0P6W8 as seed ortholog is 100%.
Bootstrap support for L0PH46 as seed ortholog is 100%.

Group of orthologs #253. Best score 513 bits
Score difference with first non-orthologous sequence - L.thermotolerans:326 P.jiroveci:513

C5DEK4              	100.00%		L0PC99              	100.00%
Bootstrap support for C5DEK4 as seed ortholog is 100%.
Bootstrap support for L0PC99 as seed ortholog is 100%.

Group of orthologs #254. Best score 512 bits
Score difference with first non-orthologous sequence - L.thermotolerans:512 P.jiroveci:512

C5DIY6              	100.00%		L0PC82              	100.00%
Bootstrap support for C5DIY6 as seed ortholog is 100%.
Bootstrap support for L0PC82 as seed ortholog is 100%.

Group of orthologs #255. Best score 511 bits
Score difference with first non-orthologous sequence - L.thermotolerans:511 P.jiroveci:511

C5DBJ3              	100.00%		L0PER3              	100.00%
Bootstrap support for C5DBJ3 as seed ortholog is 100%.
Bootstrap support for L0PER3 as seed ortholog is 100%.

Group of orthologs #256. Best score 511 bits
Score difference with first non-orthologous sequence - L.thermotolerans:511 P.jiroveci:511

C5DJR0              	100.00%		L0PB35              	100.00%
Bootstrap support for C5DJR0 as seed ortholog is 100%.
Bootstrap support for L0PB35 as seed ortholog is 100%.

Group of orthologs #257. Best score 510 bits
Score difference with first non-orthologous sequence - L.thermotolerans:510 P.jiroveci:510

C5E3C5              	100.00%		L0P6Y2              	100.00%
Bootstrap support for C5E3C5 as seed ortholog is 100%.
Bootstrap support for L0P6Y2 as seed ortholog is 100%.

Group of orthologs #258. Best score 508 bits
Score difference with first non-orthologous sequence - L.thermotolerans:440 P.jiroveci:508

C5DCA6              	100.00%		L0P7B5              	100.00%
C5DIQ5              	52.25%		
Bootstrap support for C5DCA6 as seed ortholog is 100%.
Bootstrap support for L0P7B5 as seed ortholog is 100%.

Group of orthologs #259. Best score 508 bits
Score difference with first non-orthologous sequence - L.thermotolerans:275 P.jiroveci:508

C5E259              	100.00%		L0P7D9              	100.00%
Bootstrap support for C5E259 as seed ortholog is 100%.
Bootstrap support for L0P7D9 as seed ortholog is 100%.

Group of orthologs #260. Best score 508 bits
Score difference with first non-orthologous sequence - L.thermotolerans:322 P.jiroveci:508

C5DIN6              	100.00%		L0PGR0              	100.00%
Bootstrap support for C5DIN6 as seed ortholog is 100%.
Bootstrap support for L0PGR0 as seed ortholog is 100%.

Group of orthologs #261. Best score 503 bits
Score difference with first non-orthologous sequence - L.thermotolerans:357 P.jiroveci:503

C5E242              	100.00%		L0P8N1              	100.00%
Bootstrap support for C5E242 as seed ortholog is 100%.
Bootstrap support for L0P8N1 as seed ortholog is 100%.

Group of orthologs #262. Best score 503 bits
Score difference with first non-orthologous sequence - L.thermotolerans:503 P.jiroveci:503

C5E2T4              	100.00%		L0PAR8              	100.00%
Bootstrap support for C5E2T4 as seed ortholog is 100%.
Bootstrap support for L0PAR8 as seed ortholog is 100%.

Group of orthologs #263. Best score 501 bits
Score difference with first non-orthologous sequence - L.thermotolerans:501 P.jiroveci:373

C5DJJ3              	100.00%		L0PGH3              	100.00%
Bootstrap support for C5DJJ3 as seed ortholog is 100%.
Bootstrap support for L0PGH3 as seed ortholog is 100%.

Group of orthologs #264. Best score 500 bits
Score difference with first non-orthologous sequence - L.thermotolerans:372 P.jiroveci:500

C5DM76              	100.00%		L0P9R8              	100.00%
Bootstrap support for C5DM76 as seed ortholog is 100%.
Bootstrap support for L0P9R8 as seed ortholog is 100%.

Group of orthologs #265. Best score 500 bits
Score difference with first non-orthologous sequence - L.thermotolerans:285 P.jiroveci:252

C5DKP8              	100.00%		L0PC38              	100.00%
Bootstrap support for C5DKP8 as seed ortholog is 100%.
Bootstrap support for L0PC38 as seed ortholog is 100%.

Group of orthologs #266. Best score 498 bits
Score difference with first non-orthologous sequence - L.thermotolerans:89 P.jiroveci:498

C5DM95              	100.00%		L0P7X9              	100.00%
                    	       		L0PBE2              	78.56%
Bootstrap support for C5DM95 as seed ortholog is 94%.
Bootstrap support for L0P7X9 as seed ortholog is 100%.

Group of orthologs #267. Best score 497 bits
Score difference with first non-orthologous sequence - L.thermotolerans:497 P.jiroveci:497

C5DIT4              	100.00%		L0PC09              	100.00%
Bootstrap support for C5DIT4 as seed ortholog is 100%.
Bootstrap support for L0PC09 as seed ortholog is 100%.

Group of orthologs #268. Best score 497 bits
Score difference with first non-orthologous sequence - L.thermotolerans:327 P.jiroveci:497

C5DLF2              	100.00%		L0PA75              	100.00%
Bootstrap support for C5DLF2 as seed ortholog is 100%.
Bootstrap support for L0PA75 as seed ortholog is 100%.

Group of orthologs #269. Best score 497 bits
Score difference with first non-orthologous sequence - L.thermotolerans:497 P.jiroveci:497

C5E1Z6              	100.00%		L0PCY9              	100.00%
Bootstrap support for C5E1Z6 as seed ortholog is 100%.
Bootstrap support for L0PCY9 as seed ortholog is 100%.

Group of orthologs #270. Best score 493 bits
Score difference with first non-orthologous sequence - L.thermotolerans:493 P.jiroveci:493

C5E275              	100.00%		L0PA13              	100.00%
Bootstrap support for C5E275 as seed ortholog is 100%.
Bootstrap support for L0PA13 as seed ortholog is 100%.

Group of orthologs #271. Best score 493 bits
Score difference with first non-orthologous sequence - L.thermotolerans:343 P.jiroveci:493

C5DN38              	100.00%		L0PGN1              	100.00%
Bootstrap support for C5DN38 as seed ortholog is 99%.
Bootstrap support for L0PGN1 as seed ortholog is 100%.

Group of orthologs #272. Best score 492 bits
Score difference with first non-orthologous sequence - L.thermotolerans:492 P.jiroveci:492

C5DBG3              	100.00%		L0PE41              	100.00%
Bootstrap support for C5DBG3 as seed ortholog is 100%.
Bootstrap support for L0PE41 as seed ortholog is 100%.

Group of orthologs #273. Best score 490 bits
Score difference with first non-orthologous sequence - L.thermotolerans:490 P.jiroveci:490

C5DDM5              	100.00%		L0PAC7              	100.00%
Bootstrap support for C5DDM5 as seed ortholog is 100%.
Bootstrap support for L0PAC7 as seed ortholog is 100%.

Group of orthologs #274. Best score 490 bits
Score difference with first non-orthologous sequence - L.thermotolerans:490 P.jiroveci:490

C5DG55              	100.00%		L0PB97              	100.00%
Bootstrap support for C5DG55 as seed ortholog is 100%.
Bootstrap support for L0PB97 as seed ortholog is 100%.

Group of orthologs #275. Best score 490 bits
Score difference with first non-orthologous sequence - L.thermotolerans:490 P.jiroveci:490

C5DH86              	100.00%		L0PAL8              	100.00%
Bootstrap support for C5DH86 as seed ortholog is 100%.
Bootstrap support for L0PAL8 as seed ortholog is 100%.

Group of orthologs #276. Best score 489 bits
Score difference with first non-orthologous sequence - L.thermotolerans:489 P.jiroveci:489

C5DIA6              	100.00%		L0PFM4              	100.00%
Bootstrap support for C5DIA6 as seed ortholog is 100%.
Bootstrap support for L0PFM4 as seed ortholog is 100%.

Group of orthologs #277. Best score 489 bits
Score difference with first non-orthologous sequence - L.thermotolerans:489 P.jiroveci:489

C5DKV3              	100.00%		L0PI13              	100.00%
Bootstrap support for C5DKV3 as seed ortholog is 100%.
Bootstrap support for L0PI13 as seed ortholog is 100%.

Group of orthologs #278. Best score 488 bits
Score difference with first non-orthologous sequence - L.thermotolerans:325 P.jiroveci:315

C5DBK7              	100.00%		L0P850              	100.00%
Bootstrap support for C5DBK7 as seed ortholog is 100%.
Bootstrap support for L0P850 as seed ortholog is 100%.

Group of orthologs #279. Best score 488 bits
Score difference with first non-orthologous sequence - L.thermotolerans:257 P.jiroveci:488

C5DCR9              	100.00%		L0PIP5              	100.00%
Bootstrap support for C5DCR9 as seed ortholog is 100%.
Bootstrap support for L0PIP5 as seed ortholog is 100%.

Group of orthologs #280. Best score 488 bits
Score difference with first non-orthologous sequence - L.thermotolerans:488 P.jiroveci:488

C5DN96              	100.00%		L0PB12              	100.00%
Bootstrap support for C5DN96 as seed ortholog is 100%.
Bootstrap support for L0PB12 as seed ortholog is 100%.

Group of orthologs #281. Best score 487 bits
Score difference with first non-orthologous sequence - L.thermotolerans:487 P.jiroveci:487

C5DFD5              	100.00%		L0PCH8              	100.00%
Bootstrap support for C5DFD5 as seed ortholog is 100%.
Bootstrap support for L0PCH8 as seed ortholog is 100%.

Group of orthologs #282. Best score 487 bits
Score difference with first non-orthologous sequence - L.thermotolerans:487 P.jiroveci:487

C5DI86              	100.00%		L0PBF6              	100.00%
Bootstrap support for C5DI86 as seed ortholog is 100%.
Bootstrap support for L0PBF6 as seed ortholog is 100%.

Group of orthologs #283. Best score 486 bits
Score difference with first non-orthologous sequence - L.thermotolerans:486 P.jiroveci:486

C5DMT7              	100.00%		L0PDH4              	100.00%
C5DDY9              	6.54%		
Bootstrap support for C5DMT7 as seed ortholog is 100%.
Bootstrap support for L0PDH4 as seed ortholog is 100%.

Group of orthologs #284. Best score 484 bits
Score difference with first non-orthologous sequence - L.thermotolerans:484 P.jiroveci:484

C5DJQ5              	100.00%		L0PDC9              	100.00%
Bootstrap support for C5DJQ5 as seed ortholog is 100%.
Bootstrap support for L0PDC9 as seed ortholog is 100%.

Group of orthologs #285. Best score 483 bits
Score difference with first non-orthologous sequence - L.thermotolerans:483 P.jiroveci:483

C5DH26              	100.00%		L0P9S1              	100.00%
Bootstrap support for C5DH26 as seed ortholog is 100%.
Bootstrap support for L0P9S1 as seed ortholog is 100%.

Group of orthologs #286. Best score 482 bits
Score difference with first non-orthologous sequence - L.thermotolerans:237 P.jiroveci:360

C5DEC0              	100.00%		L0PC64              	100.00%
Bootstrap support for C5DEC0 as seed ortholog is 100%.
Bootstrap support for L0PC64 as seed ortholog is 100%.

Group of orthologs #287. Best score 482 bits
Score difference with first non-orthologous sequence - L.thermotolerans:139 P.jiroveci:482

C5DLX3              	100.00%		L0PCC5              	100.00%
Bootstrap support for C5DLX3 as seed ortholog is 99%.
Bootstrap support for L0PCC5 as seed ortholog is 100%.

Group of orthologs #288. Best score 481 bits
Score difference with first non-orthologous sequence - L.thermotolerans:481 P.jiroveci:481

C5DKM4              	100.00%		L0PH96              	100.00%
Bootstrap support for C5DKM4 as seed ortholog is 100%.
Bootstrap support for L0PH96 as seed ortholog is 100%.

Group of orthologs #289. Best score 479 bits
Score difference with first non-orthologous sequence - L.thermotolerans:247 P.jiroveci:345

C5DKL1              	100.00%		L0P7V6              	100.00%
Bootstrap support for C5DKL1 as seed ortholog is 100%.
Bootstrap support for L0P7V6 as seed ortholog is 100%.

Group of orthologs #290. Best score 479 bits
Score difference with first non-orthologous sequence - L.thermotolerans:479 P.jiroveci:479

C5DLN4              	100.00%		L0P8X6              	100.00%
Bootstrap support for C5DLN4 as seed ortholog is 100%.
Bootstrap support for L0P8X6 as seed ortholog is 100%.

Group of orthologs #291. Best score 478 bits
Score difference with first non-orthologous sequence - L.thermotolerans:478 P.jiroveci:478

C5DHL5              	100.00%		L0P9I4              	100.00%
Bootstrap support for C5DHL5 as seed ortholog is 100%.
Bootstrap support for L0P9I4 as seed ortholog is 100%.

Group of orthologs #292. Best score 478 bits
Score difference with first non-orthologous sequence - L.thermotolerans:362 P.jiroveci:478

C5DN63              	100.00%		L0PA63              	100.00%
Bootstrap support for C5DN63 as seed ortholog is 100%.
Bootstrap support for L0PA63 as seed ortholog is 100%.

Group of orthologs #293. Best score 477 bits
Score difference with first non-orthologous sequence - L.thermotolerans:477 P.jiroveci:477

C5DIP7              	100.00%		L0PFI9              	100.00%
Bootstrap support for C5DIP7 as seed ortholog is 100%.
Bootstrap support for L0PFI9 as seed ortholog is 100%.

Group of orthologs #294. Best score 475 bits
Score difference with first non-orthologous sequence - L.thermotolerans:475 P.jiroveci:475

C5DD77              	100.00%		L0PET5              	100.00%
Bootstrap support for C5DD77 as seed ortholog is 100%.
Bootstrap support for L0PET5 as seed ortholog is 100%.

Group of orthologs #295. Best score 475 bits
Score difference with first non-orthologous sequence - L.thermotolerans:175 P.jiroveci:475

C5E3I0              	100.00%		L0PEN4              	100.00%
Bootstrap support for C5E3I0 as seed ortholog is 99%.
Bootstrap support for L0PEN4 as seed ortholog is 100%.

Group of orthologs #296. Best score 474 bits
Score difference with first non-orthologous sequence - L.thermotolerans:168 P.jiroveci:474

C5DKJ1              	100.00%		L0PBH6              	100.00%
Bootstrap support for C5DKJ1 as seed ortholog is 100%.
Bootstrap support for L0PBH6 as seed ortholog is 100%.

Group of orthologs #297. Best score 473 bits
Score difference with first non-orthologous sequence - L.thermotolerans:473 P.jiroveci:473

C5DE73              	100.00%		L0PDH7              	100.00%
Bootstrap support for C5DE73 as seed ortholog is 100%.
Bootstrap support for L0PDH7 as seed ortholog is 100%.

Group of orthologs #298. Best score 473 bits
Score difference with first non-orthologous sequence - L.thermotolerans:473 P.jiroveci:473

C5DMY1              	100.00%		L0P7V1              	100.00%
Bootstrap support for C5DMY1 as seed ortholog is 100%.
Bootstrap support for L0P7V1 as seed ortholog is 100%.

Group of orthologs #299. Best score 473 bits
Score difference with first non-orthologous sequence - L.thermotolerans:473 P.jiroveci:473

C5DGT9              	100.00%		L0PEU3              	100.00%
Bootstrap support for C5DGT9 as seed ortholog is 100%.
Bootstrap support for L0PEU3 as seed ortholog is 100%.

Group of orthologs #300. Best score 473 bits
Score difference with first non-orthologous sequence - L.thermotolerans:215 P.jiroveci:473

C5E2Q2              	100.00%		L0PFP0              	100.00%
Bootstrap support for C5E2Q2 as seed ortholog is 100%.
Bootstrap support for L0PFP0 as seed ortholog is 100%.

Group of orthologs #301. Best score 472 bits
Score difference with first non-orthologous sequence - L.thermotolerans:472 P.jiroveci:472

C5DFM8              	100.00%		L0PAF9              	100.00%
Bootstrap support for C5DFM8 as seed ortholog is 100%.
Bootstrap support for L0PAF9 as seed ortholog is 100%.

Group of orthologs #302. Best score 472 bits
Score difference with first non-orthologous sequence - L.thermotolerans:472 P.jiroveci:472

C5DH60              	100.00%		L0PBM5              	100.00%
Bootstrap support for C5DH60 as seed ortholog is 100%.
Bootstrap support for L0PBM5 as seed ortholog is 100%.

Group of orthologs #303. Best score 472 bits
Score difference with first non-orthologous sequence - L.thermotolerans:472 P.jiroveci:472

C5DKI3              	100.00%		L0P969              	100.00%
Bootstrap support for C5DKI3 as seed ortholog is 100%.
Bootstrap support for L0P969 as seed ortholog is 100%.

Group of orthologs #304. Best score 471 bits
Score difference with first non-orthologous sequence - L.thermotolerans:207 P.jiroveci:471

C5DDW5              	100.00%		L0PAZ6              	100.00%
C5DNC0              	6.06%		
Bootstrap support for C5DDW5 as seed ortholog is 99%.
Bootstrap support for L0PAZ6 as seed ortholog is 100%.

Group of orthologs #305. Best score 471 bits
Score difference with first non-orthologous sequence - L.thermotolerans:471 P.jiroveci:471

C5DLI5              	100.00%		L0P7D2              	100.00%
Bootstrap support for C5DLI5 as seed ortholog is 100%.
Bootstrap support for L0P7D2 as seed ortholog is 100%.

Group of orthologs #306. Best score 470 bits
Score difference with first non-orthologous sequence - L.thermotolerans:171 P.jiroveci:470

C5E2E0              	100.00%		L0P890              	100.00%
Bootstrap support for C5E2E0 as seed ortholog is 100%.
Bootstrap support for L0P890 as seed ortholog is 100%.

Group of orthologs #307. Best score 469 bits
Score difference with first non-orthologous sequence - L.thermotolerans:61 P.jiroveci:469

C5DCV9              	100.00%		L0PH29              	100.00%
Bootstrap support for C5DCV9 as seed ortholog is 96%.
Bootstrap support for L0PH29 as seed ortholog is 100%.

Group of orthologs #308. Best score 467 bits
Score difference with first non-orthologous sequence - L.thermotolerans:227 P.jiroveci:467

C5DEE2              	100.00%		L0PFS3              	100.00%
Bootstrap support for C5DEE2 as seed ortholog is 100%.
Bootstrap support for L0PFS3 as seed ortholog is 100%.

Group of orthologs #309. Best score 466 bits
Score difference with first non-orthologous sequence - L.thermotolerans:466 P.jiroveci:466

C5DF75              	100.00%		L0PG82              	100.00%
Bootstrap support for C5DF75 as seed ortholog is 100%.
Bootstrap support for L0PG82 as seed ortholog is 100%.

Group of orthologs #310. Best score 466 bits
Score difference with first non-orthologous sequence - L.thermotolerans:466 P.jiroveci:132

C5DJZ8              	100.00%		L0PEY0              	100.00%
Bootstrap support for C5DJZ8 as seed ortholog is 100%.
Bootstrap support for L0PEY0 as seed ortholog is 98%.

Group of orthologs #311. Best score 463 bits
Score difference with first non-orthologous sequence - L.thermotolerans:463 P.jiroveci:463

C5DD42              	100.00%		L0PFY1              	100.00%
Bootstrap support for C5DD42 as seed ortholog is 100%.
Bootstrap support for L0PFY1 as seed ortholog is 100%.

Group of orthologs #312. Best score 462 bits
Score difference with first non-orthologous sequence - L.thermotolerans:360 P.jiroveci:373

C5DF62              	100.00%		L0PAL3              	100.00%
Bootstrap support for C5DF62 as seed ortholog is 100%.
Bootstrap support for L0PAL3 as seed ortholog is 100%.

Group of orthologs #313. Best score 462 bits
Score difference with first non-orthologous sequence - L.thermotolerans:462 P.jiroveci:462

C5E1X3              	100.00%		L0PG48              	100.00%
Bootstrap support for C5E1X3 as seed ortholog is 100%.
Bootstrap support for L0PG48 as seed ortholog is 100%.

Group of orthologs #314. Best score 460 bits
Score difference with first non-orthologous sequence - L.thermotolerans:460 P.jiroveci:460

C5DDA9              	100.00%		L0P6R7              	100.00%
Bootstrap support for C5DDA9 as seed ortholog is 100%.
Bootstrap support for L0P6R7 as seed ortholog is 100%.

Group of orthologs #315. Best score 460 bits
Score difference with first non-orthologous sequence - L.thermotolerans:460 P.jiroveci:460

C5DIU9              	100.00%		L0PF63              	100.00%
Bootstrap support for C5DIU9 as seed ortholog is 100%.
Bootstrap support for L0PF63 as seed ortholog is 100%.

Group of orthologs #316. Best score 459 bits
Score difference with first non-orthologous sequence - L.thermotolerans:278 P.jiroveci:459

C5DG64              	100.00%		L0PA23              	100.00%
Bootstrap support for C5DG64 as seed ortholog is 100%.
Bootstrap support for L0PA23 as seed ortholog is 100%.

Group of orthologs #317. Best score 458 bits
Score difference with first non-orthologous sequence - L.thermotolerans:458 P.jiroveci:458

C5DGF0              	100.00%		L0PEE4              	100.00%
Bootstrap support for C5DGF0 as seed ortholog is 100%.
Bootstrap support for L0PEE4 as seed ortholog is 100%.

Group of orthologs #318. Best score 456 bits
Score difference with first non-orthologous sequence - L.thermotolerans:456 P.jiroveci:456

C5DDQ5              	100.00%		L0PCG8              	100.00%
Bootstrap support for C5DDQ5 as seed ortholog is 100%.
Bootstrap support for L0PCG8 as seed ortholog is 100%.

Group of orthologs #319. Best score 456 bits
Score difference with first non-orthologous sequence - L.thermotolerans:167 P.jiroveci:456

C5DCI2              	100.00%		L0PEM1              	100.00%
Bootstrap support for C5DCI2 as seed ortholog is 99%.
Bootstrap support for L0PEM1 as seed ortholog is 100%.

Group of orthologs #320. Best score 453 bits
Score difference with first non-orthologous sequence - L.thermotolerans:453 P.jiroveci:453

C5DLL3              	100.00%		L0P7A7              	100.00%
Bootstrap support for C5DLL3 as seed ortholog is 100%.
Bootstrap support for L0P7A7 as seed ortholog is 100%.

Group of orthologs #321. Best score 453 bits
Score difference with first non-orthologous sequence - L.thermotolerans:279 P.jiroveci:453

C5DJB4              	100.00%		L0PB68              	100.00%
Bootstrap support for C5DJB4 as seed ortholog is 100%.
Bootstrap support for L0PB68 as seed ortholog is 100%.

Group of orthologs #322. Best score 453 bits
Score difference with first non-orthologous sequence - L.thermotolerans:453 P.jiroveci:453

C5DLS5              	100.00%		L0P962              	100.00%
Bootstrap support for C5DLS5 as seed ortholog is 100%.
Bootstrap support for L0P962 as seed ortholog is 100%.

Group of orthologs #323. Best score 453 bits
Score difference with first non-orthologous sequence - L.thermotolerans:216 P.jiroveci:453

C5E3E1              	100.00%		L0P9X1              	100.00%
Bootstrap support for C5E3E1 as seed ortholog is 100%.
Bootstrap support for L0P9X1 as seed ortholog is 100%.

Group of orthologs #324. Best score 452 bits
Score difference with first non-orthologous sequence - L.thermotolerans:452 P.jiroveci:452

C5DHF0              	100.00%		L0PG01              	100.00%
                    	       		L0P7J0              	81.03%
Bootstrap support for C5DHF0 as seed ortholog is 100%.
Bootstrap support for L0PG01 as seed ortholog is 100%.

Group of orthologs #325. Best score 451 bits
Score difference with first non-orthologous sequence - L.thermotolerans:451 P.jiroveci:451

C5DFF6              	100.00%		L0P9U8              	100.00%
Bootstrap support for C5DFF6 as seed ortholog is 100%.
Bootstrap support for L0P9U8 as seed ortholog is 100%.

Group of orthologs #326. Best score 450 bits
Score difference with first non-orthologous sequence - L.thermotolerans:450 P.jiroveci:450

C5DEP4              	100.00%		L0P942              	100.00%
                    	       		L0P7J6              	55.53%
Bootstrap support for C5DEP4 as seed ortholog is 100%.
Bootstrap support for L0P942 as seed ortholog is 100%.

Group of orthologs #327. Best score 450 bits
Score difference with first non-orthologous sequence - L.thermotolerans:335 P.jiroveci:450

C5DIR0              	100.00%		L0P9F6              	100.00%
Bootstrap support for C5DIR0 as seed ortholog is 100%.
Bootstrap support for L0P9F6 as seed ortholog is 100%.

Group of orthologs #328. Best score 449 bits
Score difference with first non-orthologous sequence - L.thermotolerans:356 P.jiroveci:292

C5DDZ5              	100.00%		L0PEP2              	100.00%
Bootstrap support for C5DDZ5 as seed ortholog is 100%.
Bootstrap support for L0PEP2 as seed ortholog is 100%.

Group of orthologs #329. Best score 449 bits
Score difference with first non-orthologous sequence - L.thermotolerans:449 P.jiroveci:291

C5E264              	100.00%		L0PBN5              	100.00%
Bootstrap support for C5E264 as seed ortholog is 100%.
Bootstrap support for L0PBN5 as seed ortholog is 100%.

Group of orthologs #330. Best score 448 bits
Score difference with first non-orthologous sequence - L.thermotolerans:389 P.jiroveci:448

C5DKY7              	100.00%		L0PI36              	100.00%
Bootstrap support for C5DKY7 as seed ortholog is 100%.
Bootstrap support for L0PI36 as seed ortholog is 100%.

Group of orthologs #331. Best score 448 bits
Score difference with first non-orthologous sequence - L.thermotolerans:448 P.jiroveci:153

C5E3J8              	100.00%		L0PID4              	100.00%
Bootstrap support for C5E3J8 as seed ortholog is 100%.
Bootstrap support for L0PID4 as seed ortholog is 100%.

Group of orthologs #332. Best score 446 bits
Score difference with first non-orthologous sequence - L.thermotolerans:446 P.jiroveci:446

C5DEI8              	100.00%		L0PEZ3              	100.00%
Bootstrap support for C5DEI8 as seed ortholog is 100%.
Bootstrap support for L0PEZ3 as seed ortholog is 100%.

Group of orthologs #333. Best score 445 bits
Score difference with first non-orthologous sequence - L.thermotolerans:445 P.jiroveci:445

C5DG89              	100.00%		L0P917              	100.00%
                    	       		L0PF20              	87.96%
Bootstrap support for C5DG89 as seed ortholog is 100%.
Bootstrap support for L0P917 as seed ortholog is 100%.

Group of orthologs #334. Best score 445 bits
Score difference with first non-orthologous sequence - L.thermotolerans:401 P.jiroveci:445

C5DE35              	100.00%		L0PB50              	100.00%
Bootstrap support for C5DE35 as seed ortholog is 100%.
Bootstrap support for L0PB50 as seed ortholog is 100%.

Group of orthologs #335. Best score 443 bits
Score difference with first non-orthologous sequence - L.thermotolerans:443 P.jiroveci:443

C5DBV9              	100.00%		L0PBN3              	100.00%
Bootstrap support for C5DBV9 as seed ortholog is 100%.
Bootstrap support for L0PBN3 as seed ortholog is 100%.

Group of orthologs #336. Best score 443 bits
Score difference with first non-orthologous sequence - L.thermotolerans:443 P.jiroveci:443

C5DGK2              	100.00%		L0PE81              	100.00%
Bootstrap support for C5DGK2 as seed ortholog is 100%.
Bootstrap support for L0PE81 as seed ortholog is 100%.

Group of orthologs #337. Best score 443 bits
Score difference with first non-orthologous sequence - L.thermotolerans:443 P.jiroveci:443

C5DL39              	100.00%		L0PG96              	100.00%
Bootstrap support for C5DL39 as seed ortholog is 100%.
Bootstrap support for L0PG96 as seed ortholog is 100%.

Group of orthologs #338. Best score 443 bits
Score difference with first non-orthologous sequence - L.thermotolerans:173 P.jiroveci:443

C5DMJ2              	100.00%		L0PGJ9              	100.00%
Bootstrap support for C5DMJ2 as seed ortholog is 99%.
Bootstrap support for L0PGJ9 as seed ortholog is 100%.

Group of orthologs #339. Best score 443 bits
Score difference with first non-orthologous sequence - L.thermotolerans:443 P.jiroveci:443

C5E365              	100.00%		L0PEJ3              	100.00%
Bootstrap support for C5E365 as seed ortholog is 100%.
Bootstrap support for L0PEJ3 as seed ortholog is 100%.

Group of orthologs #340. Best score 440 bits
Score difference with first non-orthologous sequence - L.thermotolerans:440 P.jiroveci:440

C5DCD5              	100.00%		L0P9I2              	100.00%
Bootstrap support for C5DCD5 as seed ortholog is 100%.
Bootstrap support for L0P9I2 as seed ortholog is 100%.

Group of orthologs #341. Best score 440 bits
Score difference with first non-orthologous sequence - L.thermotolerans:440 P.jiroveci:440

C5DF34              	100.00%		L0PF49              	100.00%
Bootstrap support for C5DF34 as seed ortholog is 100%.
Bootstrap support for L0PF49 as seed ortholog is 100%.

Group of orthologs #342. Best score 439 bits
Score difference with first non-orthologous sequence - L.thermotolerans:439 P.jiroveci:439

C5E202              	100.00%		L0PCR5              	100.00%
                    	       		L0P9C2              	51.91%
Bootstrap support for C5E202 as seed ortholog is 100%.
Bootstrap support for L0PCR5 as seed ortholog is 100%.

Group of orthologs #343. Best score 439 bits
Score difference with first non-orthologous sequence - L.thermotolerans:110 P.jiroveci:439

C5DFH0              	100.00%		L0PBF0              	100.00%
Bootstrap support for C5DFH0 as seed ortholog is 99%.
Bootstrap support for L0PBF0 as seed ortholog is 100%.

Group of orthologs #344. Best score 439 bits
Score difference with first non-orthologous sequence - L.thermotolerans:124 P.jiroveci:439

C5DJT6              	100.00%		L0PDT7              	100.00%
Bootstrap support for C5DJT6 as seed ortholog is 97%.
Bootstrap support for L0PDT7 as seed ortholog is 100%.

Group of orthologs #345. Best score 439 bits
Score difference with first non-orthologous sequence - L.thermotolerans:376 P.jiroveci:439

C5E1Y7              	100.00%		L0PEY9              	100.00%
Bootstrap support for C5E1Y7 as seed ortholog is 100%.
Bootstrap support for L0PEY9 as seed ortholog is 100%.

Group of orthologs #346. Best score 438 bits
Score difference with first non-orthologous sequence - L.thermotolerans:438 P.jiroveci:438

C5DFK8              	100.00%		L0PF08              	100.00%
Bootstrap support for C5DFK8 as seed ortholog is 100%.
Bootstrap support for L0PF08 as seed ortholog is 100%.

Group of orthologs #347. Best score 438 bits
Score difference with first non-orthologous sequence - L.thermotolerans:438 P.jiroveci:438

C5E293              	100.00%		L0PGU0              	100.00%
Bootstrap support for C5E293 as seed ortholog is 100%.
Bootstrap support for L0PGU0 as seed ortholog is 100%.

Group of orthologs #348. Best score 437 bits
Score difference with first non-orthologous sequence - L.thermotolerans:437 P.jiroveci:437

C5DFD3              	100.00%		L0P9B6              	100.00%
Bootstrap support for C5DFD3 as seed ortholog is 100%.
Bootstrap support for L0P9B6 as seed ortholog is 100%.

Group of orthologs #349. Best score 436 bits
Score difference with first non-orthologous sequence - L.thermotolerans:436 P.jiroveci:436

C5DFD1              	100.00%		L0PHL3              	100.00%
Bootstrap support for C5DFD1 as seed ortholog is 100%.
Bootstrap support for L0PHL3 as seed ortholog is 100%.

Group of orthologs #350. Best score 436 bits
Score difference with first non-orthologous sequence - L.thermotolerans:24 P.jiroveci:260

C5E2W8              	100.00%		L0P9Z0              	100.00%
Bootstrap support for C5E2W8 as seed ortholog is 72%.
Alternative seed ortholog is C5DNJ3 (24 bits away from this cluster)
Bootstrap support for L0P9Z0 as seed ortholog is 100%.

Group of orthologs #351. Best score 435 bits
Score difference with first non-orthologous sequence - L.thermotolerans:233 P.jiroveci:203

C5DIE7              	100.00%		L0PAY3              	100.00%
Bootstrap support for C5DIE7 as seed ortholog is 100%.
Bootstrap support for L0PAY3 as seed ortholog is 100%.

Group of orthologs #352. Best score 433 bits
Score difference with first non-orthologous sequence - L.thermotolerans:260 P.jiroveci:433

C5DMM8              	100.00%		L0PCQ8              	100.00%
Bootstrap support for C5DMM8 as seed ortholog is 100%.
Bootstrap support for L0PCQ8 as seed ortholog is 100%.

Group of orthologs #353. Best score 432 bits
Score difference with first non-orthologous sequence - L.thermotolerans:432 P.jiroveci:432

C5DCY5              	100.00%		L0PBV4              	100.00%
Bootstrap support for C5DCY5 as seed ortholog is 100%.
Bootstrap support for L0PBV4 as seed ortholog is 100%.

Group of orthologs #354. Best score 432 bits
Score difference with first non-orthologous sequence - L.thermotolerans:432 P.jiroveci:432

C5DN28              	100.00%		L0PBA9              	100.00%
Bootstrap support for C5DN28 as seed ortholog is 100%.
Bootstrap support for L0PBA9 as seed ortholog is 100%.

Group of orthologs #355. Best score 432 bits
Score difference with first non-orthologous sequence - L.thermotolerans:432 P.jiroveci:432

C5DK45              	100.00%		L0PG16              	100.00%
Bootstrap support for C5DK45 as seed ortholog is 100%.
Bootstrap support for L0PG16 as seed ortholog is 100%.

Group of orthologs #356. Best score 431 bits
Score difference with first non-orthologous sequence - L.thermotolerans:169 P.jiroveci:379

C5E2L1              	100.00%		L0P7L0              	100.00%
                    	       		L0PCI7              	50.06%
Bootstrap support for C5E2L1 as seed ortholog is 99%.
Bootstrap support for L0P7L0 as seed ortholog is 100%.

Group of orthologs #357. Best score 431 bits
Score difference with first non-orthologous sequence - L.thermotolerans:431 P.jiroveci:181

C5DJV4              	100.00%		L0P8F3              	100.00%
Bootstrap support for C5DJV4 as seed ortholog is 100%.
Bootstrap support for L0P8F3 as seed ortholog is 99%.

Group of orthologs #358. Best score 431 bits
Score difference with first non-orthologous sequence - L.thermotolerans:431 P.jiroveci:431

C5DHP9              	100.00%		L0PF48              	100.00%
Bootstrap support for C5DHP9 as seed ortholog is 100%.
Bootstrap support for L0PF48 as seed ortholog is 100%.

Group of orthologs #359. Best score 430 bits
Score difference with first non-orthologous sequence - L.thermotolerans:430 P.jiroveci:430

C5DKJ2              	100.00%		L0PFC2              	100.00%
Bootstrap support for C5DKJ2 as seed ortholog is 100%.
Bootstrap support for L0PFC2 as seed ortholog is 100%.

Group of orthologs #360. Best score 430 bits
Score difference with first non-orthologous sequence - L.thermotolerans:288 P.jiroveci:430

C5DMG1              	100.00%		L0PGJ5              	100.00%
Bootstrap support for C5DMG1 as seed ortholog is 100%.
Bootstrap support for L0PGJ5 as seed ortholog is 100%.

Group of orthologs #361. Best score 429 bits
Score difference with first non-orthologous sequence - L.thermotolerans:233 P.jiroveci:429

C5DL05              	100.00%		L0PBY2              	100.00%
Bootstrap support for C5DL05 as seed ortholog is 100%.
Bootstrap support for L0PBY2 as seed ortholog is 100%.

Group of orthologs #362. Best score 428 bits
Score difference with first non-orthologous sequence - L.thermotolerans:428 P.jiroveci:428

C5DJZ2              	100.00%		L0PCB2              	100.00%
Bootstrap support for C5DJZ2 as seed ortholog is 100%.
Bootstrap support for L0PCB2 as seed ortholog is 100%.

Group of orthologs #363. Best score 427 bits
Score difference with first non-orthologous sequence - L.thermotolerans:162 P.jiroveci:427

C5DDB5              	100.00%		L0PCP6              	100.00%
C5DDB4              	45.56%		
Bootstrap support for C5DDB5 as seed ortholog is 99%.
Bootstrap support for L0PCP6 as seed ortholog is 100%.

Group of orthologs #364. Best score 427 bits
Score difference with first non-orthologous sequence - L.thermotolerans:427 P.jiroveci:427

C5DBH5              	100.00%		L0P9B4              	100.00%
Bootstrap support for C5DBH5 as seed ortholog is 100%.
Bootstrap support for L0P9B4 as seed ortholog is 100%.

Group of orthologs #365. Best score 427 bits
Score difference with first non-orthologous sequence - L.thermotolerans:427 P.jiroveci:427

C5DKW2              	100.00%		L0PC02              	100.00%
Bootstrap support for C5DKW2 as seed ortholog is 100%.
Bootstrap support for L0PC02 as seed ortholog is 100%.

Group of orthologs #366. Best score 426 bits
Score difference with first non-orthologous sequence - L.thermotolerans:426 P.jiroveci:426

C5E3L9              	100.00%		L0P9J7              	100.00%
Bootstrap support for C5E3L9 as seed ortholog is 100%.
Bootstrap support for L0P9J7 as seed ortholog is 100%.

Group of orthologs #367. Best score 425 bits
Score difference with first non-orthologous sequence - L.thermotolerans:425 P.jiroveci:425

C5DJM6              	100.00%		L0PEI4              	100.00%
Bootstrap support for C5DJM6 as seed ortholog is 100%.
Bootstrap support for L0PEI4 as seed ortholog is 100%.

Group of orthologs #368. Best score 424 bits
Score difference with first non-orthologous sequence - L.thermotolerans:133 P.jiroveci:322

C5E1Y4              	100.00%		L0PAY5              	100.00%
Bootstrap support for C5E1Y4 as seed ortholog is 99%.
Bootstrap support for L0PAY5 as seed ortholog is 100%.

Group of orthologs #369. Best score 424 bits
Score difference with first non-orthologous sequence - L.thermotolerans:424 P.jiroveci:424

C5DL16              	100.00%		L0PHL5              	100.00%
Bootstrap support for C5DL16 as seed ortholog is 100%.
Bootstrap support for L0PHL5 as seed ortholog is 100%.

Group of orthologs #370. Best score 422 bits
Score difference with first non-orthologous sequence - L.thermotolerans:422 P.jiroveci:422

C5DEZ7              	100.00%		L0PEG1              	100.00%
Bootstrap support for C5DEZ7 as seed ortholog is 100%.
Bootstrap support for L0PEG1 as seed ortholog is 100%.

Group of orthologs #371. Best score 420 bits
Score difference with first non-orthologous sequence - L.thermotolerans:420 P.jiroveci:420

C5DC84              	100.00%		L0P9K4              	100.00%
Bootstrap support for C5DC84 as seed ortholog is 100%.
Bootstrap support for L0P9K4 as seed ortholog is 100%.

Group of orthologs #372. Best score 420 bits
Score difference with first non-orthologous sequence - L.thermotolerans:134 P.jiroveci:420

C5DLG0              	100.00%		L0PCH0              	100.00%
Bootstrap support for C5DLG0 as seed ortholog is 99%.
Bootstrap support for L0PCH0 as seed ortholog is 100%.

Group of orthologs #373. Best score 418 bits
Score difference with first non-orthologous sequence - L.thermotolerans:418 P.jiroveci:418

C5DER6              	100.00%		L0P9C9              	100.00%
Bootstrap support for C5DER6 as seed ortholog is 100%.
Bootstrap support for L0P9C9 as seed ortholog is 100%.

Group of orthologs #374. Best score 418 bits
Score difference with first non-orthologous sequence - L.thermotolerans:418 P.jiroveci:418

C5DIS2              	100.00%		L0P7R5              	100.00%
Bootstrap support for C5DIS2 as seed ortholog is 100%.
Bootstrap support for L0P7R5 as seed ortholog is 100%.

Group of orthologs #375. Best score 416 bits
Score difference with first non-orthologous sequence - L.thermotolerans:416 P.jiroveci:351

C5DLB0              	100.00%		L0P7M4              	100.00%
                    	       		L0PH62              	48.73%
Bootstrap support for C5DLB0 as seed ortholog is 100%.
Bootstrap support for L0P7M4 as seed ortholog is 100%.

Group of orthologs #376. Best score 416 bits
Score difference with first non-orthologous sequence - L.thermotolerans:282 P.jiroveci:416

C5DFU0              	100.00%		L0P9Y8              	100.00%
Bootstrap support for C5DFU0 as seed ortholog is 100%.
Bootstrap support for L0P9Y8 as seed ortholog is 100%.

Group of orthologs #377. Best score 416 bits
Score difference with first non-orthologous sequence - L.thermotolerans:416 P.jiroveci:416

C5DB91              	100.00%		L0PET6              	100.00%
Bootstrap support for C5DB91 as seed ortholog is 100%.
Bootstrap support for L0PET6 as seed ortholog is 100%.

Group of orthologs #378. Best score 416 bits
Score difference with first non-orthologous sequence - L.thermotolerans:416 P.jiroveci:312

C5DHX2              	100.00%		L0PEW1              	100.00%
Bootstrap support for C5DHX2 as seed ortholog is 100%.
Bootstrap support for L0PEW1 as seed ortholog is 100%.

Group of orthologs #379. Best score 415 bits
Score difference with first non-orthologous sequence - L.thermotolerans:415 P.jiroveci:415

C5DEQ9              	100.00%		L0P8E8              	100.00%
                    	       		L0PEB0              	100.00%
Bootstrap support for C5DEQ9 as seed ortholog is 100%.
Bootstrap support for L0P8E8 as seed ortholog is 100%.
Bootstrap support for L0PEB0 as seed ortholog is 100%.

Group of orthologs #380. Best score 415 bits
Score difference with first non-orthologous sequence - L.thermotolerans:134 P.jiroveci:415

C5E2Q8              	100.00%		L0PBP2              	100.00%
Bootstrap support for C5E2Q8 as seed ortholog is 97%.
Bootstrap support for L0PBP2 as seed ortholog is 100%.

Group of orthologs #381. Best score 414 bits
Score difference with first non-orthologous sequence - L.thermotolerans:110 P.jiroveci:237

C5DE68              	100.00%		L0P6V9              	100.00%
Bootstrap support for C5DE68 as seed ortholog is 99%.
Bootstrap support for L0P6V9 as seed ortholog is 100%.

Group of orthologs #382. Best score 413 bits
Score difference with first non-orthologous sequence - L.thermotolerans:413 P.jiroveci:52

C5DDA0              	100.00%		L0PBI4              	100.00%
Bootstrap support for C5DDA0 as seed ortholog is 100%.
Bootstrap support for L0PBI4 as seed ortholog is 90%.

Group of orthologs #383. Best score 412 bits
Score difference with first non-orthologous sequence - L.thermotolerans:412 P.jiroveci:412

C5E3N1              	100.00%		L0PGF2              	100.00%
Bootstrap support for C5E3N1 as seed ortholog is 100%.
Bootstrap support for L0PGF2 as seed ortholog is 100%.

Group of orthologs #384. Best score 411 bits
Score difference with first non-orthologous sequence - L.thermotolerans:411 P.jiroveci:411

C5DCJ7              	100.00%		L0PAH2              	100.00%
Bootstrap support for C5DCJ7 as seed ortholog is 100%.
Bootstrap support for L0PAH2 as seed ortholog is 100%.

Group of orthologs #385. Best score 411 bits
Score difference with first non-orthologous sequence - L.thermotolerans:411 P.jiroveci:411

C5E2J0              	100.00%		L0P9Z5              	100.00%
Bootstrap support for C5E2J0 as seed ortholog is 100%.
Bootstrap support for L0P9Z5 as seed ortholog is 100%.

Group of orthologs #386. Best score 410 bits
Score difference with first non-orthologous sequence - L.thermotolerans:410 P.jiroveci:410

C5E3K0              	100.00%		L0P958              	100.00%
Bootstrap support for C5E3K0 as seed ortholog is 100%.
Bootstrap support for L0P958 as seed ortholog is 100%.

Group of orthologs #387. Best score 410 bits
Score difference with first non-orthologous sequence - L.thermotolerans:153 P.jiroveci:410

C5DNE5              	100.00%		L0PDC7              	100.00%
Bootstrap support for C5DNE5 as seed ortholog is 100%.
Bootstrap support for L0PDC7 as seed ortholog is 100%.

Group of orthologs #388. Best score 410 bits
Score difference with first non-orthologous sequence - L.thermotolerans:170 P.jiroveci:410

C5E2T0              	100.00%		L0PFW2              	100.00%
Bootstrap support for C5E2T0 as seed ortholog is 99%.
Bootstrap support for L0PFW2 as seed ortholog is 100%.

Group of orthologs #389. Best score 409 bits
Score difference with first non-orthologous sequence - L.thermotolerans:166 P.jiroveci:409

C5DC04              	100.00%		L0P9U9              	100.00%
Bootstrap support for C5DC04 as seed ortholog is 100%.
Bootstrap support for L0P9U9 as seed ortholog is 100%.

Group of orthologs #390. Best score 409 bits
Score difference with first non-orthologous sequence - L.thermotolerans:236 P.jiroveci:409

C5DEK0              	100.00%		L0PE19              	100.00%
Bootstrap support for C5DEK0 as seed ortholog is 100%.
Bootstrap support for L0PE19 as seed ortholog is 100%.

Group of orthologs #391. Best score 409 bits
Score difference with first non-orthologous sequence - L.thermotolerans:409 P.jiroveci:409

C5E2N9              	100.00%		L0PDT0              	100.00%
Bootstrap support for C5E2N9 as seed ortholog is 100%.
Bootstrap support for L0PDT0 as seed ortholog is 100%.

Group of orthologs #392. Best score 408 bits
Score difference with first non-orthologous sequence - L.thermotolerans:408 P.jiroveci:408

C5DES5              	100.00%		L0P8G8              	100.00%
Bootstrap support for C5DES5 as seed ortholog is 100%.
Bootstrap support for L0P8G8 as seed ortholog is 100%.

Group of orthologs #393. Best score 408 bits
Score difference with first non-orthologous sequence - L.thermotolerans:408 P.jiroveci:408

C5DIM3              	100.00%		L0P870              	100.00%
Bootstrap support for C5DIM3 as seed ortholog is 100%.
Bootstrap support for L0P870 as seed ortholog is 100%.

Group of orthologs #394. Best score 407 bits
Score difference with first non-orthologous sequence - L.thermotolerans:10 P.jiroveci:291

C5DJL8              	100.00%		L0PE30              	100.00%
Bootstrap support for C5DJL8 as seed ortholog is 57%.
Alternative seed ortholog is C5DBL3 (10 bits away from this cluster)
Bootstrap support for L0PE30 as seed ortholog is 100%.

Group of orthologs #395. Best score 406 bits
Score difference with first non-orthologous sequence - L.thermotolerans:406 P.jiroveci:406

C5DBF0              	100.00%		L0PCN1              	100.00%
Bootstrap support for C5DBF0 as seed ortholog is 100%.
Bootstrap support for L0PCN1 as seed ortholog is 100%.

Group of orthologs #396. Best score 406 bits
Score difference with first non-orthologous sequence - L.thermotolerans:406 P.jiroveci:406

C5DD30              	100.00%		L0PBP7              	100.00%
Bootstrap support for C5DD30 as seed ortholog is 100%.
Bootstrap support for L0PBP7 as seed ortholog is 100%.

Group of orthologs #397. Best score 406 bits
Score difference with first non-orthologous sequence - L.thermotolerans:231 P.jiroveci:406

C5DIB3              	100.00%		L0PA09              	100.00%
Bootstrap support for C5DIB3 as seed ortholog is 100%.
Bootstrap support for L0PA09 as seed ortholog is 100%.

Group of orthologs #398. Best score 405 bits
Score difference with first non-orthologous sequence - L.thermotolerans:405 P.jiroveci:405

C5DHJ2              	100.00%		L0PID0              	100.00%
Bootstrap support for C5DHJ2 as seed ortholog is 100%.
Bootstrap support for L0PID0 as seed ortholog is 100%.

Group of orthologs #399. Best score 404 bits
Score difference with first non-orthologous sequence - L.thermotolerans:404 P.jiroveci:404

C5DHY3              	100.00%		L0P8A6              	100.00%
Bootstrap support for C5DHY3 as seed ortholog is 100%.
Bootstrap support for L0P8A6 as seed ortholog is 100%.

Group of orthologs #400. Best score 404 bits
Score difference with first non-orthologous sequence - L.thermotolerans:404 P.jiroveci:404

C5DLV3              	100.00%		L0P7E2              	100.00%
Bootstrap support for C5DLV3 as seed ortholog is 100%.
Bootstrap support for L0P7E2 as seed ortholog is 100%.

Group of orthologs #401. Best score 404 bits
Score difference with first non-orthologous sequence - L.thermotolerans:404 P.jiroveci:404

C5DKG6              	100.00%		L0PA24              	100.00%
Bootstrap support for C5DKG6 as seed ortholog is 100%.
Bootstrap support for L0PA24 as seed ortholog is 100%.

Group of orthologs #402. Best score 404 bits
Score difference with first non-orthologous sequence - L.thermotolerans:404 P.jiroveci:404

C5E2G3              	100.00%		L0PCD9              	100.00%
Bootstrap support for C5E2G3 as seed ortholog is 100%.
Bootstrap support for L0PCD9 as seed ortholog is 100%.

Group of orthologs #403. Best score 404 bits
Score difference with first non-orthologous sequence - L.thermotolerans:404 P.jiroveci:404

C5DN43              	100.00%		L0PFP2              	100.00%
Bootstrap support for C5DN43 as seed ortholog is 100%.
Bootstrap support for L0PFP2 as seed ortholog is 100%.

Group of orthologs #404. Best score 404 bits
Score difference with first non-orthologous sequence - L.thermotolerans:404 P.jiroveci:404

C5E3A2              	100.00%		L0PGG0              	100.00%
Bootstrap support for C5E3A2 as seed ortholog is 100%.
Bootstrap support for L0PGG0 as seed ortholog is 100%.

Group of orthologs #405. Best score 403 bits
Score difference with first non-orthologous sequence - L.thermotolerans:327 P.jiroveci:403

C5DEV2              	100.00%		L0PD24              	100.00%
Bootstrap support for C5DEV2 as seed ortholog is 100%.
Bootstrap support for L0PD24 as seed ortholog is 100%.

Group of orthologs #406. Best score 403 bits
Score difference with first non-orthologous sequence - L.thermotolerans:403 P.jiroveci:403

C5DIY0              	100.00%		L0PBD7              	100.00%
Bootstrap support for C5DIY0 as seed ortholog is 100%.
Bootstrap support for L0PBD7 as seed ortholog is 100%.

Group of orthologs #407. Best score 402 bits
Score difference with first non-orthologous sequence - L.thermotolerans:402 P.jiroveci:402

C5DE20              	100.00%		L0PGT9              	100.00%
Bootstrap support for C5DE20 as seed ortholog is 100%.
Bootstrap support for L0PGT9 as seed ortholog is 100%.

Group of orthologs #408. Best score 402 bits
Score difference with first non-orthologous sequence - L.thermotolerans:402 P.jiroveci:402

C5DKH2              	100.00%		L0PFC9              	100.00%
Bootstrap support for C5DKH2 as seed ortholog is 100%.
Bootstrap support for L0PFC9 as seed ortholog is 100%.

Group of orthologs #409. Best score 401 bits
Score difference with first non-orthologous sequence - L.thermotolerans:401 P.jiroveci:401

C5DJW9              	100.00%		L0PBD2              	100.00%
Bootstrap support for C5DJW9 as seed ortholog is 100%.
Bootstrap support for L0PBD2 as seed ortholog is 100%.

Group of orthologs #410. Best score 401 bits
Score difference with first non-orthologous sequence - L.thermotolerans:331 P.jiroveci:324

C5E3C1              	100.00%		L0PFE0              	100.00%
Bootstrap support for C5E3C1 as seed ortholog is 100%.
Bootstrap support for L0PFE0 as seed ortholog is 100%.

Group of orthologs #411. Best score 399 bits
Score difference with first non-orthologous sequence - L.thermotolerans:399 P.jiroveci:399

C5DEG2              	100.00%		L0PB54              	100.00%
Bootstrap support for C5DEG2 as seed ortholog is 100%.
Bootstrap support for L0PB54 as seed ortholog is 100%.

Group of orthologs #412. Best score 399 bits
Score difference with first non-orthologous sequence - L.thermotolerans:330 P.jiroveci:333

C5DF00              	100.00%		L0PDG5              	100.00%
Bootstrap support for C5DF00 as seed ortholog is 100%.
Bootstrap support for L0PDG5 as seed ortholog is 100%.

Group of orthologs #413. Best score 399 bits
Score difference with first non-orthologous sequence - L.thermotolerans:399 P.jiroveci:399

C5DG45              	100.00%		L0PDQ3              	100.00%
Bootstrap support for C5DG45 as seed ortholog is 100%.
Bootstrap support for L0PDQ3 as seed ortholog is 100%.

Group of orthologs #414. Best score 399 bits
Score difference with first non-orthologous sequence - L.thermotolerans:399 P.jiroveci:399

C5DL97              	100.00%		L0P8Z9              	100.00%
Bootstrap support for C5DL97 as seed ortholog is 100%.
Bootstrap support for L0P8Z9 as seed ortholog is 100%.

Group of orthologs #415. Best score 399 bits
Score difference with first non-orthologous sequence - L.thermotolerans:399 P.jiroveci:399

C5DIX4              	100.00%		L0PFQ8              	100.00%
Bootstrap support for C5DIX4 as seed ortholog is 100%.
Bootstrap support for L0PFQ8 as seed ortholog is 100%.

Group of orthologs #416. Best score 399 bits
Score difference with first non-orthologous sequence - L.thermotolerans:181 P.jiroveci:399

C5E3R4              	100.00%		L0P8V0              	100.00%
Bootstrap support for C5E3R4 as seed ortholog is 100%.
Bootstrap support for L0P8V0 as seed ortholog is 100%.

Group of orthologs #417. Best score 398 bits
Score difference with first non-orthologous sequence - L.thermotolerans:176 P.jiroveci:62

C5DGC6              	100.00%		L0PF21              	100.00%
Bootstrap support for C5DGC6 as seed ortholog is 99%.
Bootstrap support for L0PF21 as seed ortholog is 95%.

Group of orthologs #418. Best score 398 bits
Score difference with first non-orthologous sequence - L.thermotolerans:398 P.jiroveci:398

C5DJ91              	100.00%		L0PG34              	100.00%
Bootstrap support for C5DJ91 as seed ortholog is 100%.
Bootstrap support for L0PG34 as seed ortholog is 100%.

Group of orthologs #419. Best score 397 bits
Score difference with first non-orthologous sequence - L.thermotolerans:397 P.jiroveci:397

C5DN17              	100.00%		L0PBI2              	100.00%
Bootstrap support for C5DN17 as seed ortholog is 100%.
Bootstrap support for L0PBI2 as seed ortholog is 100%.

Group of orthologs #420. Best score 396 bits
Score difference with first non-orthologous sequence - L.thermotolerans:396 P.jiroveci:396

C5DBJ9              	100.00%		L0PGJ0              	100.00%
                    	       		L0PGV9              	68.03%
Bootstrap support for C5DBJ9 as seed ortholog is 100%.
Bootstrap support for L0PGJ0 as seed ortholog is 100%.

Group of orthologs #421. Best score 396 bits
Score difference with first non-orthologous sequence - L.thermotolerans:312 P.jiroveci:396

C5DJ41              	100.00%		L0P6Z0              	100.00%
Bootstrap support for C5DJ41 as seed ortholog is 100%.
Bootstrap support for L0P6Z0 as seed ortholog is 100%.

Group of orthologs #422. Best score 395 bits
Score difference with first non-orthologous sequence - L.thermotolerans:319 P.jiroveci:395

C5DF95              	100.00%		L0PE21              	100.00%
Bootstrap support for C5DF95 as seed ortholog is 100%.
Bootstrap support for L0PE21 as seed ortholog is 100%.

Group of orthologs #423. Best score 394 bits
Score difference with first non-orthologous sequence - L.thermotolerans:394 P.jiroveci:394

C5DD39              	100.00%		L0PDI1              	100.00%
Bootstrap support for C5DD39 as seed ortholog is 100%.
Bootstrap support for L0PDI1 as seed ortholog is 100%.

Group of orthologs #424. Best score 394 bits
Score difference with first non-orthologous sequence - L.thermotolerans:394 P.jiroveci:394

C5DLL7              	100.00%		L0P7L7              	100.00%
Bootstrap support for C5DLL7 as seed ortholog is 100%.
Bootstrap support for L0P7L7 as seed ortholog is 100%.

Group of orthologs #425. Best score 393 bits
Score difference with first non-orthologous sequence - L.thermotolerans:393 P.jiroveci:393

C5DE99              	100.00%		L0PAN4              	100.00%
Bootstrap support for C5DE99 as seed ortholog is 100%.
Bootstrap support for L0PAN4 as seed ortholog is 100%.

Group of orthologs #426. Best score 393 bits
Score difference with first non-orthologous sequence - L.thermotolerans:393 P.jiroveci:393

C5DCC9              	100.00%		L0PFI2              	100.00%
Bootstrap support for C5DCC9 as seed ortholog is 100%.
Bootstrap support for L0PFI2 as seed ortholog is 100%.

Group of orthologs #427. Best score 393 bits
Score difference with first non-orthologous sequence - L.thermotolerans:393 P.jiroveci:393

C5E2P0              	100.00%		L0PBZ7              	100.00%
Bootstrap support for C5E2P0 as seed ortholog is 100%.
Bootstrap support for L0PBZ7 as seed ortholog is 100%.

Group of orthologs #428. Best score 392 bits
Score difference with first non-orthologous sequence - L.thermotolerans:392 P.jiroveci:392

C5DBU2              	100.00%		L0PH03              	100.00%
Bootstrap support for C5DBU2 as seed ortholog is 100%.
Bootstrap support for L0PH03 as seed ortholog is 100%.

Group of orthologs #429. Best score 392 bits
Score difference with first non-orthologous sequence - L.thermotolerans:392 P.jiroveci:392

C5DJA6              	100.00%		L0PD03              	100.00%
Bootstrap support for C5DJA6 as seed ortholog is 100%.
Bootstrap support for L0PD03 as seed ortholog is 100%.

Group of orthologs #430. Best score 391 bits
Score difference with first non-orthologous sequence - L.thermotolerans:391 P.jiroveci:391

C5DE93              	100.00%		L0PDY1              	100.00%
Bootstrap support for C5DE93 as seed ortholog is 100%.
Bootstrap support for L0PDY1 as seed ortholog is 100%.

Group of orthologs #431. Best score 389 bits
Score difference with first non-orthologous sequence - L.thermotolerans:389 P.jiroveci:389

C5DLD6              	100.00%		L0P912              	100.00%
                    	       		L0P908              	89.08%
Bootstrap support for C5DLD6 as seed ortholog is 100%.
Bootstrap support for L0P912 as seed ortholog is 100%.

Group of orthologs #432. Best score 389 bits
Score difference with first non-orthologous sequence - L.thermotolerans:389 P.jiroveci:389

C5DFJ5              	100.00%		L0PB60              	100.00%
Bootstrap support for C5DFJ5 as seed ortholog is 100%.
Bootstrap support for L0PB60 as seed ortholog is 100%.

Group of orthologs #433. Best score 387 bits
Score difference with first non-orthologous sequence - L.thermotolerans:387 P.jiroveci:387

C5DMW4              	100.00%		L0PC17              	100.00%
                    	       		L0PD22              	43.02%
Bootstrap support for C5DMW4 as seed ortholog is 100%.
Bootstrap support for L0PC17 as seed ortholog is 100%.

Group of orthologs #434. Best score 386 bits
Score difference with first non-orthologous sequence - L.thermotolerans:386 P.jiroveci:386

C5DEU5              	100.00%		L0PCX5              	100.00%
Bootstrap support for C5DEU5 as seed ortholog is 100%.
Bootstrap support for L0PCX5 as seed ortholog is 100%.

Group of orthologs #435. Best score 385 bits
Score difference with first non-orthologous sequence - L.thermotolerans:73 P.jiroveci:385

C5DLK6              	100.00%		L0P6U6              	100.00%
Bootstrap support for C5DLK6 as seed ortholog is 93%.
Bootstrap support for L0P6U6 as seed ortholog is 100%.

Group of orthologs #436. Best score 385 bits
Score difference with first non-orthologous sequence - L.thermotolerans:342 P.jiroveci:385

C5DHQ2              	100.00%		L0PF23              	100.00%
Bootstrap support for C5DHQ2 as seed ortholog is 100%.
Bootstrap support for L0PF23 as seed ortholog is 100%.

Group of orthologs #437. Best score 384 bits
Score difference with first non-orthologous sequence - L.thermotolerans:384 P.jiroveci:384

C5DFC8              	100.00%		L0PAC4              	100.00%
                    	       		L0P871              	98.29%
Bootstrap support for C5DFC8 as seed ortholog is 100%.
Bootstrap support for L0PAC4 as seed ortholog is 100%.

Group of orthologs #438. Best score 383 bits
Score difference with first non-orthologous sequence - L.thermotolerans:383 P.jiroveci:280

C5DFY1              	100.00%		L0P8T3              	100.00%
C5E2B3              	6.65%		
Bootstrap support for C5DFY1 as seed ortholog is 100%.
Bootstrap support for L0P8T3 as seed ortholog is 100%.

Group of orthologs #439. Best score 383 bits
Score difference with first non-orthologous sequence - L.thermotolerans:383 P.jiroveci:383

C5DH47              	100.00%		L0PCY0              	100.00%
Bootstrap support for C5DH47 as seed ortholog is 100%.
Bootstrap support for L0PCY0 as seed ortholog is 100%.

Group of orthologs #440. Best score 383 bits
Score difference with first non-orthologous sequence - L.thermotolerans:383 P.jiroveci:383

C5DMP2              	100.00%		L0PES3              	100.00%
Bootstrap support for C5DMP2 as seed ortholog is 100%.
Bootstrap support for L0PES3 as seed ortholog is 100%.

Group of orthologs #441. Best score 382 bits
Score difference with first non-orthologous sequence - L.thermotolerans:382 P.jiroveci:382

C5DIK7              	100.00%		L0PA14              	100.00%
Bootstrap support for C5DIK7 as seed ortholog is 100%.
Bootstrap support for L0PA14 as seed ortholog is 100%.

Group of orthologs #442. Best score 381 bits
Score difference with first non-orthologous sequence - L.thermotolerans:381 P.jiroveci:381

C5DLY9              	100.00%		L0P8Q5              	100.00%
Bootstrap support for C5DLY9 as seed ortholog is 100%.
Bootstrap support for L0P8Q5 as seed ortholog is 100%.

Group of orthologs #443. Best score 381 bits
Score difference with first non-orthologous sequence - L.thermotolerans:381 P.jiroveci:381

C5E3G1              	100.00%		L0PD38              	100.00%
Bootstrap support for C5E3G1 as seed ortholog is 100%.
Bootstrap support for L0PD38 as seed ortholog is 100%.

Group of orthologs #444. Best score 381 bits
Score difference with first non-orthologous sequence - L.thermotolerans:381 P.jiroveci:381

C5DMQ8              	100.00%		L0PH18              	100.00%
Bootstrap support for C5DMQ8 as seed ortholog is 100%.
Bootstrap support for L0PH18 as seed ortholog is 100%.

Group of orthologs #445. Best score 380 bits
Score difference with first non-orthologous sequence - L.thermotolerans:380 P.jiroveci:380

C5DC26              	100.00%		L0PGB9              	100.00%
Bootstrap support for C5DC26 as seed ortholog is 100%.
Bootstrap support for L0PGB9 as seed ortholog is 100%.

Group of orthologs #446. Best score 380 bits
Score difference with first non-orthologous sequence - L.thermotolerans:380 P.jiroveci:380

C5DC24              	100.00%		L0PIV4              	100.00%
Bootstrap support for C5DC24 as seed ortholog is 100%.
Bootstrap support for L0PIV4 as seed ortholog is 100%.

Group of orthologs #447. Best score 380 bits
Score difference with first non-orthologous sequence - L.thermotolerans:380 P.jiroveci:380

C5DDZ3              	100.00%		L0PHG9              	100.00%
Bootstrap support for C5DDZ3 as seed ortholog is 100%.
Bootstrap support for L0PHG9 as seed ortholog is 100%.

Group of orthologs #448. Best score 380 bits
Score difference with first non-orthologous sequence - L.thermotolerans:380 P.jiroveci:380

C5DHM9              	100.00%		L0PET9              	100.00%
Bootstrap support for C5DHM9 as seed ortholog is 100%.
Bootstrap support for L0PET9 as seed ortholog is 100%.

Group of orthologs #449. Best score 379 bits
Score difference with first non-orthologous sequence - L.thermotolerans:379 P.jiroveci:379

C5DDM9              	100.00%		L0PBQ9              	100.00%
Bootstrap support for C5DDM9 as seed ortholog is 100%.
Bootstrap support for L0PBQ9 as seed ortholog is 100%.

Group of orthologs #450. Best score 379 bits
Score difference with first non-orthologous sequence - L.thermotolerans:379 P.jiroveci:112

C5DFC2              	100.00%		L0PD82              	100.00%
Bootstrap support for C5DFC2 as seed ortholog is 100%.
Bootstrap support for L0PD82 as seed ortholog is 99%.

Group of orthologs #451. Best score 379 bits
Score difference with first non-orthologous sequence - L.thermotolerans:315 P.jiroveci:379

C5DI77              	100.00%		L0PFT9              	100.00%
Bootstrap support for C5DI77 as seed ortholog is 100%.
Bootstrap support for L0PFT9 as seed ortholog is 100%.

Group of orthologs #452. Best score 378 bits
Score difference with first non-orthologous sequence - L.thermotolerans:218 P.jiroveci:378

C5DGL9              	100.00%		L0PAA3              	100.00%
Bootstrap support for C5DGL9 as seed ortholog is 100%.
Bootstrap support for L0PAA3 as seed ortholog is 100%.

Group of orthologs #453. Best score 378 bits
Score difference with first non-orthologous sequence - L.thermotolerans:378 P.jiroveci:378

C5DLP8              	100.00%		L0PGA8              	100.00%
Bootstrap support for C5DLP8 as seed ortholog is 100%.
Bootstrap support for L0PGA8 as seed ortholog is 100%.

Group of orthologs #454. Best score 376 bits
Score difference with first non-orthologous sequence - L.thermotolerans:376 P.jiroveci:376

C5DDK2              	100.00%		L0P861              	100.00%
Bootstrap support for C5DDK2 as seed ortholog is 100%.
Bootstrap support for L0P861 as seed ortholog is 100%.

Group of orthologs #455. Best score 376 bits
Score difference with first non-orthologous sequence - L.thermotolerans:376 P.jiroveci:376

C5DHA2              	100.00%		L0P9V7              	100.00%
Bootstrap support for C5DHA2 as seed ortholog is 100%.
Bootstrap support for L0P9V7 as seed ortholog is 100%.

Group of orthologs #456. Best score 376 bits
Score difference with first non-orthologous sequence - L.thermotolerans:376 P.jiroveci:376

C5DNM0              	100.00%		L0P8R8              	100.00%
Bootstrap support for C5DNM0 as seed ortholog is 100%.
Bootstrap support for L0P8R8 as seed ortholog is 100%.

Group of orthologs #457. Best score 375 bits
Score difference with first non-orthologous sequence - L.thermotolerans:295 P.jiroveci:375

C5DF06              	100.00%		L0PG89              	100.00%
Bootstrap support for C5DF06 as seed ortholog is 100%.
Bootstrap support for L0PG89 as seed ortholog is 100%.

Group of orthologs #458. Best score 374 bits
Score difference with first non-orthologous sequence - L.thermotolerans:374 P.jiroveci:374

C5DIW5              	100.00%		L0PB24              	100.00%
Bootstrap support for C5DIW5 as seed ortholog is 100%.
Bootstrap support for L0PB24 as seed ortholog is 100%.

Group of orthologs #459. Best score 373 bits
Score difference with first non-orthologous sequence - L.thermotolerans:373 P.jiroveci:373

C5DHE3              	100.00%		L0PH80              	100.00%
Bootstrap support for C5DHE3 as seed ortholog is 100%.
Bootstrap support for L0PH80 as seed ortholog is 100%.

Group of orthologs #460. Best score 373 bits
Score difference with first non-orthologous sequence - L.thermotolerans:373 P.jiroveci:373

C5E2J6              	100.00%		L0PHI3              	100.00%
Bootstrap support for C5E2J6 as seed ortholog is 100%.
Bootstrap support for L0PHI3 as seed ortholog is 100%.

Group of orthologs #461. Best score 372 bits
Score difference with first non-orthologous sequence - L.thermotolerans:372 P.jiroveci:372

C5DEW6              	100.00%		L0PA42              	100.00%
Bootstrap support for C5DEW6 as seed ortholog is 100%.
Bootstrap support for L0PA42 as seed ortholog is 100%.

Group of orthologs #462. Best score 372 bits
Score difference with first non-orthologous sequence - L.thermotolerans:372 P.jiroveci:372

C5DJG2              	100.00%		L0PH54              	100.00%
Bootstrap support for C5DJG2 as seed ortholog is 100%.
Bootstrap support for L0PH54 as seed ortholog is 100%.

Group of orthologs #463. Best score 371 bits
Score difference with first non-orthologous sequence - L.thermotolerans:371 P.jiroveci:371

C5DEL5              	100.00%		L0PGI4              	100.00%
Bootstrap support for C5DEL5 as seed ortholog is 100%.
Bootstrap support for L0PGI4 as seed ortholog is 100%.

Group of orthologs #464. Best score 368 bits
Score difference with first non-orthologous sequence - L.thermotolerans:368 P.jiroveci:368

C5E378              	100.00%		L0PCV5              	100.00%
Bootstrap support for C5E378 as seed ortholog is 100%.
Bootstrap support for L0PCV5 as seed ortholog is 100%.

Group of orthologs #465. Best score 367 bits
Score difference with first non-orthologous sequence - L.thermotolerans:367 P.jiroveci:367

C5DMH5              	100.00%		L0PCP3              	100.00%
Bootstrap support for C5DMH5 as seed ortholog is 100%.
Bootstrap support for L0PCP3 as seed ortholog is 100%.

Group of orthologs #466. Best score 366 bits
Score difference with first non-orthologous sequence - L.thermotolerans:114 P.jiroveci:192

C5DIA1              	100.00%		L0PCT0              	100.00%
Bootstrap support for C5DIA1 as seed ortholog is 99%.
Bootstrap support for L0PCT0 as seed ortholog is 99%.

Group of orthologs #467. Best score 366 bits
Score difference with first non-orthologous sequence - L.thermotolerans:277 P.jiroveci:366

C5E1X2              	100.00%		L0P7I5              	100.00%
Bootstrap support for C5E1X2 as seed ortholog is 100%.
Bootstrap support for L0P7I5 as seed ortholog is 100%.

Group of orthologs #468. Best score 366 bits
Score difference with first non-orthologous sequence - L.thermotolerans:366 P.jiroveci:291

C5DL59              	100.00%		L0PAN7              	100.00%
Bootstrap support for C5DL59 as seed ortholog is 100%.
Bootstrap support for L0PAN7 as seed ortholog is 100%.

Group of orthologs #469. Best score 366 bits
Score difference with first non-orthologous sequence - L.thermotolerans:366 P.jiroveci:366

C5E2C5              	100.00%		L0PF90              	100.00%
Bootstrap support for C5E2C5 as seed ortholog is 100%.
Bootstrap support for L0PF90 as seed ortholog is 100%.

Group of orthologs #470. Best score 365 bits
Score difference with first non-orthologous sequence - L.thermotolerans:365 P.jiroveci:365

C5DG76              	100.00%		L0PA01              	100.00%
C5DBF9              	17.17%		L0PG99              	36.06%
Bootstrap support for C5DG76 as seed ortholog is 100%.
Bootstrap support for L0PA01 as seed ortholog is 100%.

Group of orthologs #471. Best score 365 bits
Score difference with first non-orthologous sequence - L.thermotolerans:365 P.jiroveci:365

C5DBK6              	100.00%		L0P9G7              	100.00%
Bootstrap support for C5DBK6 as seed ortholog is 100%.
Bootstrap support for L0P9G7 as seed ortholog is 100%.

Group of orthologs #472. Best score 365 bits
Score difference with first non-orthologous sequence - L.thermotolerans:365 P.jiroveci:365

C5DK98              	100.00%		L0P7Z1              	100.00%
Bootstrap support for C5DK98 as seed ortholog is 100%.
Bootstrap support for L0P7Z1 as seed ortholog is 100%.

Group of orthologs #473. Best score 365 bits
Score difference with first non-orthologous sequence - L.thermotolerans:365 P.jiroveci:365

C5E3P7              	100.00%		L0PBB7              	100.00%
Bootstrap support for C5E3P7 as seed ortholog is 100%.
Bootstrap support for L0PBB7 as seed ortholog is 100%.

Group of orthologs #474. Best score 364 bits
Score difference with first non-orthologous sequence - L.thermotolerans:364 P.jiroveci:127

C5DHN3              	100.00%		L0PD02              	100.00%
Bootstrap support for C5DHN3 as seed ortholog is 100%.
Bootstrap support for L0PD02 as seed ortholog is 100%.

Group of orthologs #475. Best score 364 bits
Score difference with first non-orthologous sequence - L.thermotolerans:267 P.jiroveci:364

C5DHT6              	100.00%		L0PF52              	100.00%
Bootstrap support for C5DHT6 as seed ortholog is 100%.
Bootstrap support for L0PF52 as seed ortholog is 100%.

Group of orthologs #476. Best score 363 bits
Score difference with first non-orthologous sequence - L.thermotolerans:70 P.jiroveci:363

C5DL27              	100.00%		L0PBY0              	100.00%
Bootstrap support for C5DL27 as seed ortholog is 91%.
Bootstrap support for L0PBY0 as seed ortholog is 100%.

Group of orthologs #477. Best score 362 bits
Score difference with first non-orthologous sequence - L.thermotolerans:362 P.jiroveci:362

C5E2H1              	100.00%		L0PFU3              	100.00%
Bootstrap support for C5E2H1 as seed ortholog is 100%.
Bootstrap support for L0PFU3 as seed ortholog is 100%.

Group of orthologs #478. Best score 361 bits
Score difference with first non-orthologous sequence - L.thermotolerans:361 P.jiroveci:361

C5DJN5              	100.00%		L0PA65              	100.00%
Bootstrap support for C5DJN5 as seed ortholog is 100%.
Bootstrap support for L0PA65 as seed ortholog is 100%.

Group of orthologs #479. Best score 361 bits
Score difference with first non-orthologous sequence - L.thermotolerans:361 P.jiroveci:361

C5DE78              	100.00%		L0PIC6              	100.00%
Bootstrap support for C5DE78 as seed ortholog is 100%.
Bootstrap support for L0PIC6 as seed ortholog is 100%.

Group of orthologs #480. Best score 361 bits
Score difference with first non-orthologous sequence - L.thermotolerans:361 P.jiroveci:297

C5E3D6              	100.00%		L0PB70              	100.00%
Bootstrap support for C5E3D6 as seed ortholog is 100%.
Bootstrap support for L0PB70 as seed ortholog is 100%.

Group of orthologs #481. Best score 360 bits
Score difference with first non-orthologous sequence - L.thermotolerans:306 P.jiroveci:292

C5DJU9              	100.00%		L0PGE3              	100.00%
                    	       		L0PEY7              	38.39%
Bootstrap support for C5DJU9 as seed ortholog is 100%.
Bootstrap support for L0PGE3 as seed ortholog is 100%.

Group of orthologs #482. Best score 360 bits
Score difference with first non-orthologous sequence - L.thermotolerans:309 P.jiroveci:360

C5DM99              	100.00%		L0P863              	100.00%
Bootstrap support for C5DM99 as seed ortholog is 100%.
Bootstrap support for L0P863 as seed ortholog is 100%.

Group of orthologs #483. Best score 359 bits
Score difference with first non-orthologous sequence - L.thermotolerans:359 P.jiroveci:359

C5DHH3              	100.00%		L0PA90              	100.00%
Bootstrap support for C5DHH3 as seed ortholog is 100%.
Bootstrap support for L0PA90 as seed ortholog is 100%.

Group of orthologs #484. Best score 358 bits
Score difference with first non-orthologous sequence - L.thermotolerans:358 P.jiroveci:358

C5DGS7              	100.00%		L0P8B2              	100.00%
Bootstrap support for C5DGS7 as seed ortholog is 100%.
Bootstrap support for L0P8B2 as seed ortholog is 100%.

Group of orthologs #485. Best score 358 bits
Score difference with first non-orthologous sequence - L.thermotolerans:358 P.jiroveci:358

C5DE89              	100.00%		L0PD99              	100.00%
Bootstrap support for C5DE89 as seed ortholog is 100%.
Bootstrap support for L0PD99 as seed ortholog is 100%.

Group of orthologs #486. Best score 358 bits
Score difference with first non-orthologous sequence - L.thermotolerans:358 P.jiroveci:358

C5DC06              	100.00%		L0PG33              	100.00%
Bootstrap support for C5DC06 as seed ortholog is 100%.
Bootstrap support for L0PG33 as seed ortholog is 100%.

Group of orthologs #487. Best score 358 bits
Score difference with first non-orthologous sequence - L.thermotolerans:186 P.jiroveci:145

C5DL29              	100.00%		L0PF10              	100.00%
Bootstrap support for C5DL29 as seed ortholog is 100%.
Bootstrap support for L0PF10 as seed ortholog is 100%.

Group of orthologs #488. Best score 356 bits
Score difference with first non-orthologous sequence - L.thermotolerans:356 P.jiroveci:356

C5DEZ9              	100.00%		L0PEG2              	100.00%
Bootstrap support for C5DEZ9 as seed ortholog is 100%.
Bootstrap support for L0PEG2 as seed ortholog is 100%.

Group of orthologs #489. Best score 356 bits
Score difference with first non-orthologous sequence - L.thermotolerans:356 P.jiroveci:356

C5DIB4              	100.00%		L0PF30              	100.00%
Bootstrap support for C5DIB4 as seed ortholog is 100%.
Bootstrap support for L0PF30 as seed ortholog is 100%.

Group of orthologs #490. Best score 354 bits
Score difference with first non-orthologous sequence - L.thermotolerans:354 P.jiroveci:354

C5DG13              	100.00%		L0PBA8              	100.00%
C5DCF1              	6.50%		
Bootstrap support for C5DG13 as seed ortholog is 100%.
Bootstrap support for L0PBA8 as seed ortholog is 100%.

Group of orthologs #491. Best score 354 bits
Score difference with first non-orthologous sequence - L.thermotolerans:354 P.jiroveci:253

C5DBA2              	100.00%		L0PA57              	100.00%
Bootstrap support for C5DBA2 as seed ortholog is 100%.
Bootstrap support for L0PA57 as seed ortholog is 100%.

Group of orthologs #492. Best score 354 bits
Score difference with first non-orthologous sequence - L.thermotolerans:124 P.jiroveci:354

C5DC80              	100.00%		L0PAW4              	100.00%
Bootstrap support for C5DC80 as seed ortholog is 99%.
Bootstrap support for L0PAW4 as seed ortholog is 100%.

Group of orthologs #493. Best score 354 bits
Score difference with first non-orthologous sequence - L.thermotolerans:354 P.jiroveci:263

C5DG88              	100.00%		L0P6U2              	100.00%
Bootstrap support for C5DG88 as seed ortholog is 100%.
Bootstrap support for L0P6U2 as seed ortholog is 99%.

Group of orthologs #494. Best score 354 bits
Score difference with first non-orthologous sequence - L.thermotolerans:354 P.jiroveci:354

C5DFU8              	100.00%		L0PCV1              	100.00%
Bootstrap support for C5DFU8 as seed ortholog is 100%.
Bootstrap support for L0PCV1 as seed ortholog is 100%.

Group of orthologs #495. Best score 354 bits
Score difference with first non-orthologous sequence - L.thermotolerans:354 P.jiroveci:354

C5E2M3              	100.00%		L0PBL3              	100.00%
Bootstrap support for C5E2M3 as seed ortholog is 100%.
Bootstrap support for L0PBL3 as seed ortholog is 100%.

Group of orthologs #496. Best score 354 bits
Score difference with first non-orthologous sequence - L.thermotolerans:354 P.jiroveci:354

C5E3K7              	100.00%		L0PCL4              	100.00%
Bootstrap support for C5E3K7 as seed ortholog is 100%.
Bootstrap support for L0PCL4 as seed ortholog is 100%.

Group of orthologs #497. Best score 353 bits
Score difference with first non-orthologous sequence - L.thermotolerans:353 P.jiroveci:353

C5DFR3              	100.00%		L0PCG4              	100.00%
Bootstrap support for C5DFR3 as seed ortholog is 100%.
Bootstrap support for L0PCG4 as seed ortholog is 100%.

Group of orthologs #498. Best score 353 bits
Score difference with first non-orthologous sequence - L.thermotolerans:206 P.jiroveci:353

C5DNC4              	100.00%		L0PBM6              	100.00%
Bootstrap support for C5DNC4 as seed ortholog is 100%.
Bootstrap support for L0PBM6 as seed ortholog is 100%.

Group of orthologs #499. Best score 353 bits
Score difference with first non-orthologous sequence - L.thermotolerans:288 P.jiroveci:353

C5DMB6              	100.00%		L0PCT4              	100.00%
Bootstrap support for C5DMB6 as seed ortholog is 100%.
Bootstrap support for L0PCT4 as seed ortholog is 100%.

Group of orthologs #500. Best score 353 bits
Score difference with first non-orthologous sequence - L.thermotolerans:353 P.jiroveci:353

C5DIQ1              	100.00%		L0PH06              	100.00%
Bootstrap support for C5DIQ1 as seed ortholog is 100%.
Bootstrap support for L0PH06 as seed ortholog is 100%.

Group of orthologs #501. Best score 353 bits
Score difference with first non-orthologous sequence - L.thermotolerans:353 P.jiroveci:353

C5E2M5              	100.00%		L0PBY3              	100.00%
Bootstrap support for C5E2M5 as seed ortholog is 100%.
Bootstrap support for L0PBY3 as seed ortholog is 100%.

Group of orthologs #502. Best score 351 bits
Score difference with first non-orthologous sequence - L.thermotolerans:351 P.jiroveci:351

C5DBZ6              	100.00%		L0PA32              	100.00%
Bootstrap support for C5DBZ6 as seed ortholog is 100%.
Bootstrap support for L0PA32 as seed ortholog is 100%.

Group of orthologs #503. Best score 351 bits
Score difference with first non-orthologous sequence - L.thermotolerans:187 P.jiroveci:351

C5DER2              	100.00%		L0PD75              	100.00%
Bootstrap support for C5DER2 as seed ortholog is 99%.
Bootstrap support for L0PD75 as seed ortholog is 100%.

Group of orthologs #504. Best score 351 bits
Score difference with first non-orthologous sequence - L.thermotolerans:183 P.jiroveci:134

C5DIB6              	100.00%		L0PCJ3              	100.00%
Bootstrap support for C5DIB6 as seed ortholog is 100%.
Bootstrap support for L0PCJ3 as seed ortholog is 99%.

Group of orthologs #505. Best score 351 bits
Score difference with first non-orthologous sequence - L.thermotolerans:294 P.jiroveci:269

C5DN80              	100.00%		L0PEF5              	100.00%
Bootstrap support for C5DN80 as seed ortholog is 100%.
Bootstrap support for L0PEF5 as seed ortholog is 100%.

Group of orthologs #506. Best score 350 bits
Score difference with first non-orthologous sequence - L.thermotolerans:350 P.jiroveci:350

C5DNI7              	100.00%		L0PEZ2              	100.00%
                    	       		L0PH30              	83.46%
Bootstrap support for C5DNI7 as seed ortholog is 100%.
Bootstrap support for L0PEZ2 as seed ortholog is 100%.

Group of orthologs #507. Best score 349 bits
Score difference with first non-orthologous sequence - L.thermotolerans:349 P.jiroveci:349

C5DBM5              	100.00%		L0P9T1              	100.00%
Bootstrap support for C5DBM5 as seed ortholog is 100%.
Bootstrap support for L0P9T1 as seed ortholog is 100%.

Group of orthologs #508. Best score 349 bits
Score difference with first non-orthologous sequence - L.thermotolerans:349 P.jiroveci:349

C5DCG2              	100.00%		L0PG81              	100.00%
Bootstrap support for C5DCG2 as seed ortholog is 100%.
Bootstrap support for L0PG81 as seed ortholog is 100%.

Group of orthologs #509. Best score 348 bits
Score difference with first non-orthologous sequence - L.thermotolerans:348 P.jiroveci:348

C5DDU6              	100.00%		L0PES4              	100.00%
Bootstrap support for C5DDU6 as seed ortholog is 100%.
Bootstrap support for L0PES4 as seed ortholog is 100%.

Group of orthologs #510. Best score 348 bits
Score difference with first non-orthologous sequence - L.thermotolerans:271 P.jiroveci:348

C5DIW1              	100.00%		L0PIR9              	100.00%
Bootstrap support for C5DIW1 as seed ortholog is 100%.
Bootstrap support for L0PIR9 as seed ortholog is 100%.

Group of orthologs #511. Best score 347 bits
Score difference with first non-orthologous sequence - L.thermotolerans:184 P.jiroveci:280

C5DJH8              	100.00%		L0PAX8              	100.00%
Bootstrap support for C5DJH8 as seed ortholog is 100%.
Bootstrap support for L0PAX8 as seed ortholog is 100%.

Group of orthologs #512. Best score 346 bits
Score difference with first non-orthologous sequence - L.thermotolerans:153 P.jiroveci:346

C5DKS6              	100.00%		L0PCK1              	100.00%
                    	       		L0PGI6              	62.11%
Bootstrap support for C5DKS6 as seed ortholog is 99%.
Bootstrap support for L0PCK1 as seed ortholog is 100%.

Group of orthologs #513. Best score 346 bits
Score difference with first non-orthologous sequence - L.thermotolerans:76 P.jiroveci:262

C5DC86              	100.00%		L0PAI9              	100.00%
Bootstrap support for C5DC86 as seed ortholog is 98%.
Bootstrap support for L0PAI9 as seed ortholog is 100%.

Group of orthologs #514. Best score 346 bits
Score difference with first non-orthologous sequence - L.thermotolerans:346 P.jiroveci:346

C5DBP6              	100.00%		L0PEX5              	100.00%
Bootstrap support for C5DBP6 as seed ortholog is 100%.
Bootstrap support for L0PEX5 as seed ortholog is 100%.

Group of orthologs #515. Best score 346 bits
Score difference with first non-orthologous sequence - L.thermotolerans:262 P.jiroveci:346

C5DJB7              	100.00%		L0PF67              	100.00%
Bootstrap support for C5DJB7 as seed ortholog is 100%.
Bootstrap support for L0PF67 as seed ortholog is 100%.

Group of orthologs #516. Best score 346 bits
Score difference with first non-orthologous sequence - L.thermotolerans:346 P.jiroveci:346

C5DJN7              	100.00%		L0PFD9              	100.00%
Bootstrap support for C5DJN7 as seed ortholog is 100%.
Bootstrap support for L0PFD9 as seed ortholog is 100%.

Group of orthologs #517. Best score 346 bits
Score difference with first non-orthologous sequence - L.thermotolerans:346 P.jiroveci:126

C5E311              	100.00%		L0PC91              	100.00%
Bootstrap support for C5E311 as seed ortholog is 100%.
Bootstrap support for L0PC91 as seed ortholog is 99%.

Group of orthologs #518. Best score 345 bits
Score difference with first non-orthologous sequence - L.thermotolerans:345 P.jiroveci:345

C5DDN3              	100.00%		L0PAB3              	100.00%
Bootstrap support for C5DDN3 as seed ortholog is 100%.
Bootstrap support for L0PAB3 as seed ortholog is 100%.

Group of orthologs #519. Best score 345 bits
Score difference with first non-orthologous sequence - L.thermotolerans:345 P.jiroveci:345

C5DJ58              	100.00%		L0PED5              	100.00%
Bootstrap support for C5DJ58 as seed ortholog is 100%.
Bootstrap support for L0PED5 as seed ortholog is 100%.

Group of orthologs #520. Best score 345 bits
Score difference with first non-orthologous sequence - L.thermotolerans:345 P.jiroveci:345

C5DNN8              	100.00%		L0P9X7              	100.00%
Bootstrap support for C5DNN8 as seed ortholog is 100%.
Bootstrap support for L0P9X7 as seed ortholog is 100%.

Group of orthologs #521. Best score 345 bits
Score difference with first non-orthologous sequence - L.thermotolerans:345 P.jiroveci:345

C5DNR0              	100.00%		L0PAG0              	100.00%
Bootstrap support for C5DNR0 as seed ortholog is 100%.
Bootstrap support for L0PAG0 as seed ortholog is 100%.

Group of orthologs #522. Best score 344 bits
Score difference with first non-orthologous sequence - L.thermotolerans:297 P.jiroveci:344

C5DGH5              	100.00%		L0P7T8              	100.00%
Bootstrap support for C5DGH5 as seed ortholog is 100%.
Bootstrap support for L0P7T8 as seed ortholog is 100%.

Group of orthologs #523. Best score 344 bits
Score difference with first non-orthologous sequence - L.thermotolerans:344 P.jiroveci:344

C5E234              	100.00%		L0PBQ1              	100.00%
Bootstrap support for C5E234 as seed ortholog is 100%.
Bootstrap support for L0PBQ1 as seed ortholog is 100%.

Group of orthologs #524. Best score 343 bits
Score difference with first non-orthologous sequence - L.thermotolerans:343 P.jiroveci:343

C5DCE9              	100.00%		L0PA88              	100.00%
Bootstrap support for C5DCE9 as seed ortholog is 100%.
Bootstrap support for L0PA88 as seed ortholog is 100%.

Group of orthologs #525. Best score 343 bits
Score difference with first non-orthologous sequence - L.thermotolerans:343 P.jiroveci:343

C5DG67              	100.00%		L0PDV1              	100.00%
Bootstrap support for C5DG67 as seed ortholog is 100%.
Bootstrap support for L0PDV1 as seed ortholog is 100%.

Group of orthologs #526. Best score 343 bits
Score difference with first non-orthologous sequence - L.thermotolerans:115 P.jiroveci:343

C5E237              	100.00%		L0PAR0              	100.00%
Bootstrap support for C5E237 as seed ortholog is 99%.
Bootstrap support for L0PAR0 as seed ortholog is 100%.

Group of orthologs #527. Best score 342 bits
Score difference with first non-orthologous sequence - L.thermotolerans:342 P.jiroveci:342

C5DBK3              	100.00%		L0PA34              	100.00%
Bootstrap support for C5DBK3 as seed ortholog is 100%.
Bootstrap support for L0PA34 as seed ortholog is 100%.

Group of orthologs #528. Best score 342 bits
Score difference with first non-orthologous sequence - L.thermotolerans:284 P.jiroveci:236

C5E3R6              	100.00%		L0PAL2              	100.00%
Bootstrap support for C5E3R6 as seed ortholog is 100%.
Bootstrap support for L0PAL2 as seed ortholog is 100%.

Group of orthologs #529. Best score 342 bits
Score difference with first non-orthologous sequence - L.thermotolerans:294 P.jiroveci:342

C5E3J5              	100.00%		L0PC30              	100.00%
Bootstrap support for C5E3J5 as seed ortholog is 100%.
Bootstrap support for L0PC30 as seed ortholog is 100%.

Group of orthologs #530. Best score 341 bits
Score difference with first non-orthologous sequence - L.thermotolerans:341 P.jiroveci:341

C5DGG4              	100.00%		L0PA00              	100.00%
Bootstrap support for C5DGG4 as seed ortholog is 100%.
Bootstrap support for L0PA00 as seed ortholog is 100%.

Group of orthologs #531. Best score 341 bits
Score difference with first non-orthologous sequence - L.thermotolerans:104 P.jiroveci:341

C5DHW6              	100.00%		L0PCU5              	100.00%
Bootstrap support for C5DHW6 as seed ortholog is 93%.
Bootstrap support for L0PCU5 as seed ortholog is 100%.

Group of orthologs #532. Best score 340 bits
Score difference with first non-orthologous sequence - L.thermotolerans:135 P.jiroveci:264

C5DBF7              	100.00%		L0P966              	100.00%
Bootstrap support for C5DBF7 as seed ortholog is 99%.
Bootstrap support for L0P966 as seed ortholog is 100%.

Group of orthologs #533. Best score 339 bits
Score difference with first non-orthologous sequence - L.thermotolerans:339 P.jiroveci:339

C5DBD5              	100.00%		L0PGF5              	100.00%
Bootstrap support for C5DBD5 as seed ortholog is 100%.
Bootstrap support for L0PGF5 as seed ortholog is 100%.

Group of orthologs #534. Best score 339 bits
Score difference with first non-orthologous sequence - L.thermotolerans:339 P.jiroveci:339

C5DJ38              	100.00%		L0PBB0              	100.00%
Bootstrap support for C5DJ38 as seed ortholog is 100%.
Bootstrap support for L0PBB0 as seed ortholog is 100%.

Group of orthologs #535. Best score 339 bits
Score difference with first non-orthologous sequence - L.thermotolerans:339 P.jiroveci:339

C5E2F6              	100.00%		L0PB82              	100.00%
Bootstrap support for C5E2F6 as seed ortholog is 100%.
Bootstrap support for L0PB82 as seed ortholog is 100%.

Group of orthologs #536. Best score 338 bits
Score difference with first non-orthologous sequence - L.thermotolerans:338 P.jiroveci:338

C5DIL8              	100.00%		L0P8W4              	100.00%
Bootstrap support for C5DIL8 as seed ortholog is 100%.
Bootstrap support for L0P8W4 as seed ortholog is 100%.

Group of orthologs #537. Best score 338 bits
Score difference with first non-orthologous sequence - L.thermotolerans:77 P.jiroveci:291

C5E2M4              	100.00%		L0PCJ5              	100.00%
Bootstrap support for C5E2M4 as seed ortholog is 97%.
Bootstrap support for L0PCJ5 as seed ortholog is 100%.

Group of orthologs #538. Best score 337 bits
Score difference with first non-orthologous sequence - L.thermotolerans:337 P.jiroveci:337

C5DET5              	100.00%		L0PCL6              	100.00%
Bootstrap support for C5DET5 as seed ortholog is 100%.
Bootstrap support for L0PCL6 as seed ortholog is 100%.

Group of orthologs #539. Best score 337 bits
Score difference with first non-orthologous sequence - L.thermotolerans:266 P.jiroveci:337

C5DI35              	100.00%		L0P9B8              	100.00%
Bootstrap support for C5DI35 as seed ortholog is 100%.
Bootstrap support for L0P9B8 as seed ortholog is 100%.

Group of orthologs #540. Best score 337 bits
Score difference with first non-orthologous sequence - L.thermotolerans:81 P.jiroveci:337

C5DC37              	100.00%		L0PHT7              	100.00%
Bootstrap support for C5DC37 as seed ortholog is 96%.
Bootstrap support for L0PHT7 as seed ortholog is 100%.

Group of orthologs #541. Best score 337 bits
Score difference with first non-orthologous sequence - L.thermotolerans:337 P.jiroveci:337

C5DJM9              	100.00%		L0PD17              	100.00%
Bootstrap support for C5DJM9 as seed ortholog is 100%.
Bootstrap support for L0PD17 as seed ortholog is 100%.

Group of orthologs #542. Best score 336 bits
Score difference with first non-orthologous sequence - L.thermotolerans:195 P.jiroveci:336

C5DJ93              	100.00%		L0PEA7              	100.00%
Bootstrap support for C5DJ93 as seed ortholog is 99%.
Bootstrap support for L0PEA7 as seed ortholog is 100%.

Group of orthologs #543. Best score 335 bits
Score difference with first non-orthologous sequence - L.thermotolerans:147 P.jiroveci:246

C5E3B0              	100.00%		L0PCN5              	100.00%
                    	       		L0P7B6              	91.30%
Bootstrap support for C5E3B0 as seed ortholog is 99%.
Bootstrap support for L0PCN5 as seed ortholog is 100%.

Group of orthologs #544. Best score 335 bits
Score difference with first non-orthologous sequence - L.thermotolerans:135 P.jiroveci:335

C5DBD0              	100.00%		L0P891              	100.00%
Bootstrap support for C5DBD0 as seed ortholog is 99%.
Bootstrap support for L0P891 as seed ortholog is 100%.

Group of orthologs #545. Best score 335 bits
Score difference with first non-orthologous sequence - L.thermotolerans:335 P.jiroveci:335

C5DJU2              	100.00%		L0PD41              	100.00%
Bootstrap support for C5DJU2 as seed ortholog is 100%.
Bootstrap support for L0PD41 as seed ortholog is 100%.

Group of orthologs #546. Best score 335 bits
Score difference with first non-orthologous sequence - L.thermotolerans:335 P.jiroveci:335

C5DK06              	100.00%		L0PFK7              	100.00%
Bootstrap support for C5DK06 as seed ortholog is 100%.
Bootstrap support for L0PFK7 as seed ortholog is 100%.

Group of orthologs #547. Best score 332 bits
Score difference with first non-orthologous sequence - L.thermotolerans:332 P.jiroveci:332

C5DCJ3              	100.00%		L0PDU1              	100.00%
Bootstrap support for C5DCJ3 as seed ortholog is 100%.
Bootstrap support for L0PDU1 as seed ortholog is 100%.

Group of orthologs #548. Best score 331 bits
Score difference with first non-orthologous sequence - L.thermotolerans:331 P.jiroveci:331

C5DEN6              	100.00%		L0PF71              	100.00%
Bootstrap support for C5DEN6 as seed ortholog is 100%.
Bootstrap support for L0PF71 as seed ortholog is 100%.

Group of orthologs #549. Best score 331 bits
Score difference with first non-orthologous sequence - L.thermotolerans:331 P.jiroveci:270

C5DJG3              	100.00%		L0PBU6              	100.00%
Bootstrap support for C5DJG3 as seed ortholog is 100%.
Bootstrap support for L0PBU6 as seed ortholog is 100%.

Group of orthologs #550. Best score 330 bits
Score difference with first non-orthologous sequence - L.thermotolerans:330 P.jiroveci:330

C5DIR6              	100.00%		L0PCH6              	100.00%
Bootstrap support for C5DIR6 as seed ortholog is 100%.
Bootstrap support for L0PCH6 as seed ortholog is 100%.

Group of orthologs #551. Best score 329 bits
Score difference with first non-orthologous sequence - L.thermotolerans:329 P.jiroveci:329

C5DGB8              	100.00%		L0PEY2              	100.00%
Bootstrap support for C5DGB8 as seed ortholog is 100%.
Bootstrap support for L0PEY2 as seed ortholog is 100%.

Group of orthologs #552. Best score 329 bits
Score difference with first non-orthologous sequence - L.thermotolerans:329 P.jiroveci:329

C5DNH7              	100.00%		L0PAT1              	100.00%
Bootstrap support for C5DNH7 as seed ortholog is 100%.
Bootstrap support for L0PAT1 as seed ortholog is 100%.

Group of orthologs #553. Best score 329 bits
Score difference with first non-orthologous sequence - L.thermotolerans:329 P.jiroveci:251

C5E2X4              	100.00%		L0PCM1              	100.00%
Bootstrap support for C5E2X4 as seed ortholog is 100%.
Bootstrap support for L0PCM1 as seed ortholog is 100%.

Group of orthologs #554. Best score 329 bits
Score difference with first non-orthologous sequence - L.thermotolerans:278 P.jiroveci:329

C5E3P4              	100.00%		L0PEX7              	100.00%
Bootstrap support for C5E3P4 as seed ortholog is 100%.
Bootstrap support for L0PEX7 as seed ortholog is 100%.

Group of orthologs #555. Best score 328 bits
Score difference with first non-orthologous sequence - L.thermotolerans:328 P.jiroveci:64

C5DI26              	100.00%		L0PDK4              	100.00%
Bootstrap support for C5DI26 as seed ortholog is 100%.
Bootstrap support for L0PDK4 as seed ortholog is 93%.

Group of orthologs #556. Best score 328 bits
Score difference with first non-orthologous sequence - L.thermotolerans:328 P.jiroveci:328

C5DNK6              	100.00%		L0PHG7              	100.00%
Bootstrap support for C5DNK6 as seed ortholog is 100%.
Bootstrap support for L0PHG7 as seed ortholog is 100%.

Group of orthologs #557. Best score 327 bits
Score difference with first non-orthologous sequence - L.thermotolerans:327 P.jiroveci:327

C5DLD9              	100.00%		L0PC62              	100.00%
Bootstrap support for C5DLD9 as seed ortholog is 100%.
Bootstrap support for L0PC62 as seed ortholog is 100%.

Group of orthologs #558. Best score 326 bits
Score difference with first non-orthologous sequence - L.thermotolerans:326 P.jiroveci:326

C5DFN7              	100.00%		L0PBC5              	100.00%
Bootstrap support for C5DFN7 as seed ortholog is 100%.
Bootstrap support for L0PBC5 as seed ortholog is 100%.

Group of orthologs #559. Best score 326 bits
Score difference with first non-orthologous sequence - L.thermotolerans:230 P.jiroveci:326

C5DHI5              	100.00%		L0PEQ4              	100.00%
Bootstrap support for C5DHI5 as seed ortholog is 100%.
Bootstrap support for L0PEQ4 as seed ortholog is 100%.

Group of orthologs #560. Best score 326 bits
Score difference with first non-orthologous sequence - L.thermotolerans:326 P.jiroveci:326

C5DNE8              	100.00%		L0PAG1              	100.00%
Bootstrap support for C5DNE8 as seed ortholog is 100%.
Bootstrap support for L0PAG1 as seed ortholog is 100%.

Group of orthologs #561. Best score 325 bits
Score difference with first non-orthologous sequence - L.thermotolerans:325 P.jiroveci:169

C5DEH6              	100.00%		L0P9F3              	100.00%
Bootstrap support for C5DEH6 as seed ortholog is 100%.
Bootstrap support for L0P9F3 as seed ortholog is 100%.

Group of orthologs #562. Best score 325 bits
Score difference with first non-orthologous sequence - L.thermotolerans:270 P.jiroveci:261

C5DF52              	100.00%		L0PDB2              	100.00%
Bootstrap support for C5DF52 as seed ortholog is 100%.
Bootstrap support for L0PDB2 as seed ortholog is 100%.

Group of orthologs #563. Best score 325 bits
Score difference with first non-orthologous sequence - L.thermotolerans:132 P.jiroveci:131

C5DKV9              	100.00%		L0P6X2              	100.00%
Bootstrap support for C5DKV9 as seed ortholog is 99%.
Bootstrap support for L0P6X2 as seed ortholog is 100%.

Group of orthologs #564. Best score 325 bits
Score difference with first non-orthologous sequence - L.thermotolerans:249 P.jiroveci:139

C5DE53              	100.00%		L0PHK8              	100.00%
Bootstrap support for C5DE53 as seed ortholog is 100%.
Bootstrap support for L0PHK8 as seed ortholog is 99%.

Group of orthologs #565. Best score 325 bits
Score difference with first non-orthologous sequence - L.thermotolerans:133 P.jiroveci:224

C5E229              	100.00%		L0PBC8              	100.00%
Bootstrap support for C5E229 as seed ortholog is 99%.
Bootstrap support for L0PBC8 as seed ortholog is 100%.

Group of orthologs #566. Best score 324 bits
Score difference with first non-orthologous sequence - L.thermotolerans:195 P.jiroveci:324

C5DHG1              	100.00%		L0P8U6              	100.00%
Bootstrap support for C5DHG1 as seed ortholog is 95%.
Bootstrap support for L0P8U6 as seed ortholog is 100%.

Group of orthologs #567. Best score 324 bits
Score difference with first non-orthologous sequence - L.thermotolerans:257 P.jiroveci:324

C5DBT0              	100.00%		L0PG08              	100.00%
Bootstrap support for C5DBT0 as seed ortholog is 100%.
Bootstrap support for L0PG08 as seed ortholog is 100%.

Group of orthologs #568. Best score 323 bits
Score difference with first non-orthologous sequence - L.thermotolerans:323 P.jiroveci:323

C5DF43              	100.00%		L0PB10              	100.00%
Bootstrap support for C5DF43 as seed ortholog is 100%.
Bootstrap support for L0PB10 as seed ortholog is 100%.

Group of orthologs #569. Best score 323 bits
Score difference with first non-orthologous sequence - L.thermotolerans:323 P.jiroveci:213

C5E3R3              	100.00%		L0PB21              	100.00%
Bootstrap support for C5E3R3 as seed ortholog is 100%.
Bootstrap support for L0PB21 as seed ortholog is 100%.

Group of orthologs #570. Best score 322 bits
Score difference with first non-orthologous sequence - L.thermotolerans:322 P.jiroveci:322

C5DK73              	100.00%		L0P7U2              	100.00%
Bootstrap support for C5DK73 as seed ortholog is 100%.
Bootstrap support for L0P7U2 as seed ortholog is 100%.

Group of orthologs #571. Best score 322 bits
Score difference with first non-orthologous sequence - L.thermotolerans:126 P.jiroveci:322

C5DLV4              	100.00%		L0PFA3              	100.00%
Bootstrap support for C5DLV4 as seed ortholog is 99%.
Bootstrap support for L0PFA3 as seed ortholog is 100%.

Group of orthologs #572. Best score 320 bits
Score difference with first non-orthologous sequence - L.thermotolerans:320 P.jiroveci:320

C5DG68              	100.00%		L0PAI0              	100.00%
Bootstrap support for C5DG68 as seed ortholog is 100%.
Bootstrap support for L0PAI0 as seed ortholog is 100%.

Group of orthologs #573. Best score 320 bits
Score difference with first non-orthologous sequence - L.thermotolerans:320 P.jiroveci:320

C5E2K1              	100.00%		L0PGQ4              	100.00%
Bootstrap support for C5E2K1 as seed ortholog is 100%.
Bootstrap support for L0PGQ4 as seed ortholog is 100%.

Group of orthologs #574. Best score 319 bits
Score difference with first non-orthologous sequence - L.thermotolerans:319 P.jiroveci:319

C5DEP9              	100.00%		L0PG44              	100.00%
Bootstrap support for C5DEP9 as seed ortholog is 100%.
Bootstrap support for L0PG44 as seed ortholog is 100%.

Group of orthologs #575. Best score 319 bits
Score difference with first non-orthologous sequence - L.thermotolerans:319 P.jiroveci:319

C5E3M2              	100.00%		L0P7Q3              	100.00%
Bootstrap support for C5E3M2 as seed ortholog is 100%.
Bootstrap support for L0P7Q3 as seed ortholog is 100%.

Group of orthologs #576. Best score 319 bits
Score difference with first non-orthologous sequence - L.thermotolerans:319 P.jiroveci:319

C5E3N8              	100.00%		L0PG02              	100.00%
Bootstrap support for C5E3N8 as seed ortholog is 100%.
Bootstrap support for L0PG02 as seed ortholog is 100%.

Group of orthologs #577. Best score 318 bits
Score difference with first non-orthologous sequence - L.thermotolerans:318 P.jiroveci:318

C5DBR3              	100.00%		L0PEQ2              	100.00%
                    	       		L0P999              	53.40%
Bootstrap support for C5DBR3 as seed ortholog is 100%.
Bootstrap support for L0PEQ2 as seed ortholog is 100%.

Group of orthologs #578. Best score 318 bits
Score difference with first non-orthologous sequence - L.thermotolerans:318 P.jiroveci:318

C5DLH7              	100.00%		L0PFX9              	100.00%
Bootstrap support for C5DLH7 as seed ortholog is 100%.
Bootstrap support for L0PFX9 as seed ortholog is 100%.

Group of orthologs #579. Best score 317 bits
Score difference with first non-orthologous sequence - L.thermotolerans:317 P.jiroveci:317

C5DCZ1              	100.00%		L0P9X4              	100.00%
Bootstrap support for C5DCZ1 as seed ortholog is 100%.
Bootstrap support for L0P9X4 as seed ortholog is 100%.

Group of orthologs #580. Best score 317 bits
Score difference with first non-orthologous sequence - L.thermotolerans:268 P.jiroveci:317

C5DG79              	100.00%		L0PCJ2              	100.00%
Bootstrap support for C5DG79 as seed ortholog is 100%.
Bootstrap support for L0PCJ2 as seed ortholog is 100%.

Group of orthologs #581. Best score 317 bits
Score difference with first non-orthologous sequence - L.thermotolerans:197 P.jiroveci:317

C5DKQ0              	100.00%		L0PA15              	100.00%
Bootstrap support for C5DKQ0 as seed ortholog is 99%.
Bootstrap support for L0PA15 as seed ortholog is 100%.

Group of orthologs #582. Best score 317 bits
Score difference with first non-orthologous sequence - L.thermotolerans:317 P.jiroveci:317

C5DLJ2              	100.00%		L0P9Q8              	100.00%
Bootstrap support for C5DLJ2 as seed ortholog is 100%.
Bootstrap support for L0P9Q8 as seed ortholog is 100%.

Group of orthologs #583. Best score 317 bits
Score difference with first non-orthologous sequence - L.thermotolerans:317 P.jiroveci:317

C5DJD5              	100.00%		L0PCK9              	100.00%
Bootstrap support for C5DJD5 as seed ortholog is 100%.
Bootstrap support for L0PCK9 as seed ortholog is 100%.

Group of orthologs #584. Best score 316 bits
Score difference with first non-orthologous sequence - L.thermotolerans:316 P.jiroveci:316

C5E2J2              	100.00%		L0PEB2              	100.00%
Bootstrap support for C5E2J2 as seed ortholog is 100%.
Bootstrap support for L0PEB2 as seed ortholog is 100%.

Group of orthologs #585. Best score 315 bits
Score difference with first non-orthologous sequence - L.thermotolerans:207 P.jiroveci:315

C5E2K0              	100.00%		L0PEJ9              	100.00%
Bootstrap support for C5E2K0 as seed ortholog is 100%.
Bootstrap support for L0PEJ9 as seed ortholog is 100%.

Group of orthologs #586. Best score 315 bits
Score difference with first non-orthologous sequence - L.thermotolerans:315 P.jiroveci:315

C5E2C8              	100.00%		L0PEW5              	100.00%
Bootstrap support for C5E2C8 as seed ortholog is 100%.
Bootstrap support for L0PEW5 as seed ortholog is 100%.

Group of orthologs #587. Best score 314 bits
Score difference with first non-orthologous sequence - L.thermotolerans:314 P.jiroveci:314

C5DJQ7              	100.00%		L0PFI8              	100.00%
Bootstrap support for C5DJQ7 as seed ortholog is 100%.
Bootstrap support for L0PFI8 as seed ortholog is 100%.

Group of orthologs #588. Best score 313 bits
Score difference with first non-orthologous sequence - L.thermotolerans:313 P.jiroveci:313

C5DNR1              	100.00%		L0P9T2              	100.00%
Bootstrap support for C5DNR1 as seed ortholog is 100%.
Bootstrap support for L0P9T2 as seed ortholog is 100%.

Group of orthologs #589. Best score 312 bits
Score difference with first non-orthologous sequence - L.thermotolerans:312 P.jiroveci:312

C5DN61              	100.00%		L0PFX1              	100.00%
Bootstrap support for C5DN61 as seed ortholog is 100%.
Bootstrap support for L0PFX1 as seed ortholog is 100%.

Group of orthologs #590. Best score 311 bits
Score difference with first non-orthologous sequence - L.thermotolerans:311 P.jiroveci:311

C5DJF0              	100.00%		L0P9Z4              	100.00%
Bootstrap support for C5DJF0 as seed ortholog is 100%.
Bootstrap support for L0P9Z4 as seed ortholog is 100%.

Group of orthologs #591. Best score 311 bits
Score difference with first non-orthologous sequence - L.thermotolerans:311 P.jiroveci:311

C5DN49              	100.00%		L0P9S5              	100.00%
Bootstrap support for C5DN49 as seed ortholog is 100%.
Bootstrap support for L0P9S5 as seed ortholog is 100%.

Group of orthologs #592. Best score 311 bits
Score difference with first non-orthologous sequence - L.thermotolerans:311 P.jiroveci:311

C5E2D6              	100.00%		L0P9W3              	100.00%
Bootstrap support for C5E2D6 as seed ortholog is 100%.
Bootstrap support for L0P9W3 as seed ortholog is 100%.

Group of orthologs #593. Best score 311 bits
Score difference with first non-orthologous sequence - L.thermotolerans:311 P.jiroveci:311

C5DNA4              	100.00%		L0PCI3              	100.00%
Bootstrap support for C5DNA4 as seed ortholog is 100%.
Bootstrap support for L0PCI3 as seed ortholog is 100%.

Group of orthologs #594. Best score 311 bits
Score difference with first non-orthologous sequence - L.thermotolerans:263 P.jiroveci:311

C5E1X9              	100.00%		L0PFS8              	100.00%
Bootstrap support for C5E1X9 as seed ortholog is 100%.
Bootstrap support for L0PFS8 as seed ortholog is 100%.

Group of orthologs #595. Best score 310 bits
Score difference with first non-orthologous sequence - L.thermotolerans:310 P.jiroveci:310

C5DID1              	100.00%		L0P9F7              	100.00%
C5DDI9              	47.01%		L0PGP0              	80.79%
Bootstrap support for C5DID1 as seed ortholog is 100%.
Bootstrap support for L0P9F7 as seed ortholog is 100%.

Group of orthologs #596. Best score 310 bits
Score difference with first non-orthologous sequence - L.thermotolerans:310 P.jiroveci:310

C5E2S2              	100.00%		L0PFZ0              	100.00%
Bootstrap support for C5E2S2 as seed ortholog is 100%.
Bootstrap support for L0PFZ0 as seed ortholog is 100%.

Group of orthologs #597. Best score 309 bits
Score difference with first non-orthologous sequence - L.thermotolerans:309 P.jiroveci:309

C5DKY6              	100.00%		L0PCK3              	100.00%
Bootstrap support for C5DKY6 as seed ortholog is 100%.
Bootstrap support for L0PCK3 as seed ortholog is 100%.

Group of orthologs #598. Best score 307 bits
Score difference with first non-orthologous sequence - L.thermotolerans:307 P.jiroveci:307

C5DBD8              	100.00%		L0P9P0              	100.00%
C5DGQ9              	10.43%		
Bootstrap support for C5DBD8 as seed ortholog is 100%.
Bootstrap support for L0P9P0 as seed ortholog is 100%.

Group of orthologs #599. Best score 307 bits
Score difference with first non-orthologous sequence - L.thermotolerans:255 P.jiroveci:307

C5DLS9              	100.00%		L0PET2              	100.00%
                    	       		L0PAE5              	81.12%
Bootstrap support for C5DLS9 as seed ortholog is 100%.
Bootstrap support for L0PET2 as seed ortholog is 100%.

Group of orthologs #600. Best score 307 bits
Score difference with first non-orthologous sequence - L.thermotolerans:307 P.jiroveci:307

C5DD24              	100.00%		L0PBN2              	100.00%
Bootstrap support for C5DD24 as seed ortholog is 100%.
Bootstrap support for L0PBN2 as seed ortholog is 100%.

Group of orthologs #601. Best score 307 bits
Score difference with first non-orthologous sequence - L.thermotolerans:307 P.jiroveci:307

C5DHF5              	100.00%		L0PAL6              	100.00%
Bootstrap support for C5DHF5 as seed ortholog is 100%.
Bootstrap support for L0PAL6 as seed ortholog is 100%.

Group of orthologs #602. Best score 307 bits
Score difference with first non-orthologous sequence - L.thermotolerans:307 P.jiroveci:307

C5DH94              	100.00%		L0PDN4              	100.00%
Bootstrap support for C5DH94 as seed ortholog is 100%.
Bootstrap support for L0PDN4 as seed ortholog is 100%.

Group of orthologs #603. Best score 307 bits
Score difference with first non-orthologous sequence - L.thermotolerans:307 P.jiroveci:307

C5DMY2              	100.00%		L0PDL6              	100.00%
Bootstrap support for C5DMY2 as seed ortholog is 100%.
Bootstrap support for L0PDL6 as seed ortholog is 100%.

Group of orthologs #604. Best score 306 bits
Score difference with first non-orthologous sequence - L.thermotolerans:306 P.jiroveci:306

C5DD97              	100.00%		L0P880              	100.00%
Bootstrap support for C5DD97 as seed ortholog is 100%.
Bootstrap support for L0P880 as seed ortholog is 100%.

Group of orthologs #605. Best score 306 bits
Score difference with first non-orthologous sequence - L.thermotolerans:142 P.jiroveci:80

C5DGD2              	100.00%		L0P980              	100.00%
Bootstrap support for C5DGD2 as seed ortholog is 99%.
Bootstrap support for L0P980 as seed ortholog is 99%.

Group of orthologs #606. Best score 306 bits
Score difference with first non-orthologous sequence - L.thermotolerans:191 P.jiroveci:178

C5E392              	100.00%		L0PGT4              	100.00%
Bootstrap support for C5E392 as seed ortholog is 99%.
Bootstrap support for L0PGT4 as seed ortholog is 99%.

Group of orthologs #607. Best score 305 bits
Score difference with first non-orthologous sequence - L.thermotolerans:305 P.jiroveci:97

C5DI00              	100.00%		L0PCE9              	100.00%
Bootstrap support for C5DI00 as seed ortholog is 100%.
Bootstrap support for L0PCE9 as seed ortholog is 95%.

Group of orthologs #608. Best score 305 bits
Score difference with first non-orthologous sequence - L.thermotolerans:305 P.jiroveci:305

C5DKU1              	100.00%		L0PDT6              	100.00%
Bootstrap support for C5DKU1 as seed ortholog is 100%.
Bootstrap support for L0PDT6 as seed ortholog is 100%.

Group of orthologs #609. Best score 304 bits
Score difference with first non-orthologous sequence - L.thermotolerans:250 P.jiroveci:304

C5DMM2              	100.00%		L0PDW0              	100.00%
Bootstrap support for C5DMM2 as seed ortholog is 100%.
Bootstrap support for L0PDW0 as seed ortholog is 100%.

Group of orthologs #610. Best score 303 bits
Score difference with first non-orthologous sequence - L.thermotolerans:303 P.jiroveci:231

C5DF42              	100.00%		L0PDL9              	100.00%
Bootstrap support for C5DF42 as seed ortholog is 100%.
Bootstrap support for L0PDL9 as seed ortholog is 100%.

Group of orthologs #611. Best score 303 bits
Score difference with first non-orthologous sequence - L.thermotolerans:303 P.jiroveci:303

C5DFI8              	100.00%		L0PI19              	100.00%
Bootstrap support for C5DFI8 as seed ortholog is 100%.
Bootstrap support for L0PI19 as seed ortholog is 100%.

Group of orthologs #612. Best score 302 bits
Score difference with first non-orthologous sequence - L.thermotolerans:302 P.jiroveci:302

C5DDS1              	100.00%		L0PA92              	100.00%
                    	       		L0P8X8              	34.07%
Bootstrap support for C5DDS1 as seed ortholog is 100%.
Bootstrap support for L0PA92 as seed ortholog is 100%.

Group of orthologs #613. Best score 302 bits
Score difference with first non-orthologous sequence - L.thermotolerans:8 P.jiroveci:302

C5DGD6              	100.00%		L0P9I8              	100.00%
Bootstrap support for C5DGD6 as seed ortholog is 51%.
Alternative seed ortholog is C5DCF8 (8 bits away from this cluster)
Bootstrap support for L0P9I8 as seed ortholog is 100%.

Group of orthologs #614. Best score 302 bits
Score difference with first non-orthologous sequence - L.thermotolerans:302 P.jiroveci:302

C5DI89              	100.00%		L0P9Y7              	100.00%
Bootstrap support for C5DI89 as seed ortholog is 100%.
Bootstrap support for L0P9Y7 as seed ortholog is 100%.

Group of orthologs #615. Best score 302 bits
Score difference with first non-orthologous sequence - L.thermotolerans:302 P.jiroveci:302

C5DDF0              	100.00%		L0PF74              	100.00%
Bootstrap support for C5DDF0 as seed ortholog is 100%.
Bootstrap support for L0PF74 as seed ortholog is 100%.

Group of orthologs #616. Best score 302 bits
Score difference with first non-orthologous sequence - L.thermotolerans:302 P.jiroveci:302

C5DFQ6              	100.00%		L0PE74              	100.00%
Bootstrap support for C5DFQ6 as seed ortholog is 100%.
Bootstrap support for L0PE74 as seed ortholog is 100%.

Group of orthologs #617. Best score 302 bits
Score difference with first non-orthologous sequence - L.thermotolerans:302 P.jiroveci:302

C5DL43              	100.00%		L0PB94              	100.00%
Bootstrap support for C5DL43 as seed ortholog is 100%.
Bootstrap support for L0PB94 as seed ortholog is 100%.

Group of orthologs #618. Best score 302 bits
Score difference with first non-orthologous sequence - L.thermotolerans:212 P.jiroveci:220

C5DJI8              	100.00%		L0PFK0              	100.00%
Bootstrap support for C5DJI8 as seed ortholog is 100%.
Bootstrap support for L0PFK0 as seed ortholog is 100%.

Group of orthologs #619. Best score 301 bits
Score difference with first non-orthologous sequence - L.thermotolerans:301 P.jiroveci:301

C5DDB8              	100.00%		L0PBJ1              	100.00%
Bootstrap support for C5DDB8 as seed ortholog is 100%.
Bootstrap support for L0PBJ1 as seed ortholog is 100%.

Group of orthologs #620. Best score 301 bits
Score difference with first non-orthologous sequence - L.thermotolerans:301 P.jiroveci:301

C5DHL0              	100.00%		L0PFJ7              	100.00%
Bootstrap support for C5DHL0 as seed ortholog is 100%.
Bootstrap support for L0PFJ7 as seed ortholog is 100%.

Group of orthologs #621. Best score 300 bits
Score difference with first non-orthologous sequence - L.thermotolerans:300 P.jiroveci:300

C5DIR3              	100.00%		L0P923              	100.00%
Bootstrap support for C5DIR3 as seed ortholog is 100%.
Bootstrap support for L0P923 as seed ortholog is 100%.

Group of orthologs #622. Best score 300 bits
Score difference with first non-orthologous sequence - L.thermotolerans:300 P.jiroveci:300

C5DKN5              	100.00%		L0PFZ1              	100.00%
Bootstrap support for C5DKN5 as seed ortholog is 100%.
Bootstrap support for L0PFZ1 as seed ortholog is 100%.

Group of orthologs #623. Best score 300 bits
Score difference with first non-orthologous sequence - L.thermotolerans:300 P.jiroveci:300

C5E2Y3              	100.00%		L0PEV9              	100.00%
Bootstrap support for C5E2Y3 as seed ortholog is 100%.
Bootstrap support for L0PEV9 as seed ortholog is 100%.

Group of orthologs #624. Best score 299 bits
Score difference with first non-orthologous sequence - L.thermotolerans:299 P.jiroveci:299

C5DBX8              	100.00%		L0PAJ2              	100.00%
Bootstrap support for C5DBX8 as seed ortholog is 100%.
Bootstrap support for L0PAJ2 as seed ortholog is 100%.

Group of orthologs #625. Best score 299 bits
Score difference with first non-orthologous sequence - L.thermotolerans:299 P.jiroveci:299

C5DET4              	100.00%		L0P8A7              	100.00%
Bootstrap support for C5DET4 as seed ortholog is 100%.
Bootstrap support for L0P8A7 as seed ortholog is 100%.

Group of orthologs #626. Best score 299 bits
Score difference with first non-orthologous sequence - L.thermotolerans:299 P.jiroveci:146

C5DE03              	100.00%		L0PDB7              	100.00%
Bootstrap support for C5DE03 as seed ortholog is 100%.
Bootstrap support for L0PDB7 as seed ortholog is 99%.

Group of orthologs #627. Best score 299 bits
Score difference with first non-orthologous sequence - L.thermotolerans:299 P.jiroveci:299

C5DLU0              	100.00%		L0PEA3              	100.00%
Bootstrap support for C5DLU0 as seed ortholog is 100%.
Bootstrap support for L0PEA3 as seed ortholog is 100%.

Group of orthologs #628. Best score 298 bits
Score difference with first non-orthologous sequence - L.thermotolerans:298 P.jiroveci:298

C5DBQ4              	100.00%		L0PDH0              	100.00%
Bootstrap support for C5DBQ4 as seed ortholog is 100%.
Bootstrap support for L0PDH0 as seed ortholog is 100%.

Group of orthologs #629. Best score 298 bits
Score difference with first non-orthologous sequence - L.thermotolerans:184 P.jiroveci:298

C5DIS0              	100.00%		L0P7P4              	100.00%
Bootstrap support for C5DIS0 as seed ortholog is 100%.
Bootstrap support for L0P7P4 as seed ortholog is 100%.

Group of orthologs #630. Best score 298 bits
Score difference with first non-orthologous sequence - L.thermotolerans:298 P.jiroveci:298

C5DF02              	100.00%		L0PD43              	100.00%
Bootstrap support for C5DF02 as seed ortholog is 100%.
Bootstrap support for L0PD43 as seed ortholog is 100%.

Group of orthologs #631. Best score 298 bits
Score difference with first non-orthologous sequence - L.thermotolerans:298 P.jiroveci:298

C5DMH1              	100.00%		L0P8L5              	100.00%
Bootstrap support for C5DMH1 as seed ortholog is 100%.
Bootstrap support for L0P8L5 as seed ortholog is 100%.

Group of orthologs #632. Best score 297 bits
Score difference with first non-orthologous sequence - L.thermotolerans:226 P.jiroveci:297

C5DI68              	100.00%		L0PBK1              	100.00%
Bootstrap support for C5DI68 as seed ortholog is 100%.
Bootstrap support for L0PBK1 as seed ortholog is 100%.

Group of orthologs #633. Best score 297 bits
Score difference with first non-orthologous sequence - L.thermotolerans:297 P.jiroveci:297

C5DK57              	100.00%		L0PBT0              	100.00%
Bootstrap support for C5DK57 as seed ortholog is 100%.
Bootstrap support for L0PBT0 as seed ortholog is 100%.

Group of orthologs #634. Best score 297 bits
Score difference with first non-orthologous sequence - L.thermotolerans:297 P.jiroveci:297

C5E1Z7              	100.00%		L0P8X1              	100.00%
Bootstrap support for C5E1Z7 as seed ortholog is 100%.
Bootstrap support for L0P8X1 as seed ortholog is 100%.

Group of orthologs #635. Best score 296 bits
Score difference with first non-orthologous sequence - L.thermotolerans:296 P.jiroveci:296

C5DF41              	100.00%		L0PD44              	100.00%
Bootstrap support for C5DF41 as seed ortholog is 100%.
Bootstrap support for L0PD44 as seed ortholog is 100%.

Group of orthologs #636. Best score 295 bits
Score difference with first non-orthologous sequence - L.thermotolerans:295 P.jiroveci:295

C5DD92              	100.00%		L0PEC0              	100.00%
Bootstrap support for C5DD92 as seed ortholog is 100%.
Bootstrap support for L0PEC0 as seed ortholog is 100%.

Group of orthologs #637. Best score 295 bits
Score difference with first non-orthologous sequence - L.thermotolerans:295 P.jiroveci:295

C5DJE3              	100.00%		L0P9M9              	100.00%
Bootstrap support for C5DJE3 as seed ortholog is 100%.
Bootstrap support for L0P9M9 as seed ortholog is 100%.

Group of orthologs #638. Best score 295 bits
Score difference with first non-orthologous sequence - L.thermotolerans:295 P.jiroveci:295

C5DM24              	100.00%		L0P9N8              	100.00%
Bootstrap support for C5DM24 as seed ortholog is 100%.
Bootstrap support for L0P9N8 as seed ortholog is 100%.

Group of orthologs #639. Best score 294 bits
Score difference with first non-orthologous sequence - L.thermotolerans:294 P.jiroveci:294

C5DDA4              	100.00%		L0PB61              	100.00%
Bootstrap support for C5DDA4 as seed ortholog is 100%.
Bootstrap support for L0PB61 as seed ortholog is 100%.

Group of orthologs #640. Best score 294 bits
Score difference with first non-orthologous sequence - L.thermotolerans:294 P.jiroveci:294

C5DJG9              	100.00%		L0PDZ2              	100.00%
Bootstrap support for C5DJG9 as seed ortholog is 100%.
Bootstrap support for L0PDZ2 as seed ortholog is 100%.

Group of orthologs #641. Best score 293 bits
Score difference with first non-orthologous sequence - L.thermotolerans:293 P.jiroveci:293

C5E2I0              	100.00%		L0PDV0              	100.00%
Bootstrap support for C5E2I0 as seed ortholog is 100%.
Bootstrap support for L0PDV0 as seed ortholog is 100%.

Group of orthologs #642. Best score 292 bits
Score difference with first non-orthologous sequence - L.thermotolerans:231 P.jiroveci:292

C5DGJ6              	100.00%		L0PG69              	100.00%
Bootstrap support for C5DGJ6 as seed ortholog is 100%.
Bootstrap support for L0PG69 as seed ortholog is 100%.

Group of orthologs #643. Best score 292 bits
Score difference with first non-orthologous sequence - L.thermotolerans:292 P.jiroveci:292

C5DI09              	100.00%		L0PH23              	100.00%
Bootstrap support for C5DI09 as seed ortholog is 100%.
Bootstrap support for L0PH23 as seed ortholog is 100%.

Group of orthologs #644. Best score 291 bits
Score difference with first non-orthologous sequence - L.thermotolerans:291 P.jiroveci:291

C5E2L8              	100.00%		L0P705              	100.00%
Bootstrap support for C5E2L8 as seed ortholog is 100%.
Bootstrap support for L0P705 as seed ortholog is 100%.

Group of orthologs #645. Best score 291 bits
Score difference with first non-orthologous sequence - L.thermotolerans:291 P.jiroveci:291

C5DML6              	100.00%		L0PF92              	100.00%
Bootstrap support for C5DML6 as seed ortholog is 100%.
Bootstrap support for L0PF92 as seed ortholog is 100%.

Group of orthologs #646. Best score 290 bits
Score difference with first non-orthologous sequence - L.thermotolerans:290 P.jiroveci:290

C5DC83              	100.00%		L0PBX2              	100.00%
Bootstrap support for C5DC83 as seed ortholog is 100%.
Bootstrap support for L0PBX2 as seed ortholog is 100%.

Group of orthologs #647. Best score 290 bits
Score difference with first non-orthologous sequence - L.thermotolerans:290 P.jiroveci:8

C5E3L0              	100.00%		L0P7X1              	100.00%
Bootstrap support for C5E3L0 as seed ortholog is 100%.
Bootstrap support for L0P7X1 as seed ortholog is 56%.
Alternative seed ortholog is L0PAI4 (8 bits away from this cluster)

Group of orthologs #648. Best score 290 bits
Score difference with first non-orthologous sequence - L.thermotolerans:290 P.jiroveci:290

C5E3M1              	100.00%		L0PGE7              	100.00%
Bootstrap support for C5E3M1 as seed ortholog is 100%.
Bootstrap support for L0PGE7 as seed ortholog is 100%.

Group of orthologs #649. Best score 289 bits
Score difference with first non-orthologous sequence - L.thermotolerans:289 P.jiroveci:289

C5DCY4              	100.00%		L0PAD9              	100.00%
Bootstrap support for C5DCY4 as seed ortholog is 100%.
Bootstrap support for L0PAD9 as seed ortholog is 100%.

Group of orthologs #650. Best score 289 bits
Score difference with first non-orthologous sequence - L.thermotolerans:117 P.jiroveci:289

C5DE86              	100.00%		L0PGH8              	100.00%
Bootstrap support for C5DE86 as seed ortholog is 99%.
Bootstrap support for L0PGH8 as seed ortholog is 100%.

Group of orthologs #651. Best score 289 bits
Score difference with first non-orthologous sequence - L.thermotolerans:289 P.jiroveci:289

C5DNL2              	100.00%		L0P7W4              	100.00%
Bootstrap support for C5DNL2 as seed ortholog is 100%.
Bootstrap support for L0P7W4 as seed ortholog is 100%.

Group of orthologs #652. Best score 289 bits
Score difference with first non-orthologous sequence - L.thermotolerans:152 P.jiroveci:289

C5E2F0              	100.00%		L0PCG0              	100.00%
Bootstrap support for C5E2F0 as seed ortholog is 100%.
Bootstrap support for L0PCG0 as seed ortholog is 100%.

Group of orthologs #653. Best score 288 bits
Score difference with first non-orthologous sequence - L.thermotolerans:143 P.jiroveci:288

C5DI74              	100.00%		L0PEX1              	100.00%
Bootstrap support for C5DI74 as seed ortholog is 100%.
Bootstrap support for L0PEX1 as seed ortholog is 100%.

Group of orthologs #654. Best score 288 bits
Score difference with first non-orthologous sequence - L.thermotolerans:288 P.jiroveci:288

C5E2U0              	100.00%		L0PFG1              	100.00%
Bootstrap support for C5E2U0 as seed ortholog is 100%.
Bootstrap support for L0PFG1 as seed ortholog is 100%.

Group of orthologs #655. Best score 287 bits
Score difference with first non-orthologous sequence - L.thermotolerans:287 P.jiroveci:287

C5DLQ0              	100.00%		L0PBX4              	100.00%
Bootstrap support for C5DLQ0 as seed ortholog is 100%.
Bootstrap support for L0PBX4 as seed ortholog is 100%.

Group of orthologs #656. Best score 286 bits
Score difference with first non-orthologous sequence - L.thermotolerans:286 P.jiroveci:286

C5DJG0              	100.00%		L0PD18              	100.00%
Bootstrap support for C5DJG0 as seed ortholog is 100%.
Bootstrap support for L0PD18 as seed ortholog is 100%.

Group of orthologs #657. Best score 285 bits
Score difference with first non-orthologous sequence - L.thermotolerans:209 P.jiroveci:285

C5DFC5              	100.00%		L0PBQ3              	100.00%
Bootstrap support for C5DFC5 as seed ortholog is 100%.
Bootstrap support for L0PBQ3 as seed ortholog is 100%.

Group of orthologs #658. Best score 285 bits
Score difference with first non-orthologous sequence - L.thermotolerans:142 P.jiroveci:285

C5DEF2              	100.00%		L0PFK9              	100.00%
Bootstrap support for C5DEF2 as seed ortholog is 99%.
Bootstrap support for L0PFK9 as seed ortholog is 100%.

Group of orthologs #659. Best score 285 bits
Score difference with first non-orthologous sequence - L.thermotolerans:119 P.jiroveci:285

C5DJG7              	100.00%		L0PEC6              	100.00%
Bootstrap support for C5DJG7 as seed ortholog is 99%.
Bootstrap support for L0PEC6 as seed ortholog is 100%.

Group of orthologs #660. Best score 284 bits
Score difference with first non-orthologous sequence - L.thermotolerans:284 P.jiroveci:284

C5E3A7              	100.00%		L0PG22              	100.00%
                    	       		L0PB04              	71.87%
Bootstrap support for C5E3A7 as seed ortholog is 100%.
Bootstrap support for L0PG22 as seed ortholog is 100%.

Group of orthologs #661. Best score 284 bits
Score difference with first non-orthologous sequence - L.thermotolerans:284 P.jiroveci:284

C5DBF6              	100.00%		L0P949              	100.00%
Bootstrap support for C5DBF6 as seed ortholog is 100%.
Bootstrap support for L0P949 as seed ortholog is 100%.

Group of orthologs #662. Best score 284 bits
Score difference with first non-orthologous sequence - L.thermotolerans:122 P.jiroveci:78

C5DJR2              	100.00%		L0PD71              	100.00%
Bootstrap support for C5DJR2 as seed ortholog is 99%.
Bootstrap support for L0PD71 as seed ortholog is 97%.

Group of orthologs #663. Best score 282 bits
Score difference with first non-orthologous sequence - L.thermotolerans:88 P.jiroveci:282

C5DER8              	100.00%		L0P992              	100.00%
Bootstrap support for C5DER8 as seed ortholog is 97%.
Bootstrap support for L0P992 as seed ortholog is 100%.

Group of orthologs #664. Best score 282 bits
Score difference with first non-orthologous sequence - L.thermotolerans:282 P.jiroveci:282

C5DG49              	100.00%		L0P9T5              	100.00%
Bootstrap support for C5DG49 as seed ortholog is 100%.
Bootstrap support for L0P9T5 as seed ortholog is 100%.

Group of orthologs #665. Best score 282 bits
Score difference with first non-orthologous sequence - L.thermotolerans:282 P.jiroveci:282

C5DMY3              	100.00%		L0PBP4              	100.00%
Bootstrap support for C5DMY3 as seed ortholog is 100%.
Bootstrap support for L0PBP4 as seed ortholog is 100%.

Group of orthologs #666. Best score 281 bits
Score difference with first non-orthologous sequence - L.thermotolerans:281 P.jiroveci:281

C5DI19              	100.00%		L0P7H2              	100.00%
Bootstrap support for C5DI19 as seed ortholog is 100%.
Bootstrap support for L0P7H2 as seed ortholog is 100%.

Group of orthologs #667. Best score 281 bits
Score difference with first non-orthologous sequence - L.thermotolerans:226 P.jiroveci:281

C5DGA6              	100.00%		L0PEX9              	100.00%
Bootstrap support for C5DGA6 as seed ortholog is 100%.
Bootstrap support for L0PEX9 as seed ortholog is 100%.

Group of orthologs #668. Best score 280 bits
Score difference with first non-orthologous sequence - L.thermotolerans:280 P.jiroveci:280

C5DE26              	100.00%		L0P7V8              	100.00%
Bootstrap support for C5DE26 as seed ortholog is 100%.
Bootstrap support for L0P7V8 as seed ortholog is 100%.

Group of orthologs #669. Best score 280 bits
Score difference with first non-orthologous sequence - L.thermotolerans:280 P.jiroveci:280

C5DG87              	100.00%		L0P834              	100.00%
Bootstrap support for C5DG87 as seed ortholog is 100%.
Bootstrap support for L0P834 as seed ortholog is 100%.

Group of orthologs #670. Best score 280 bits
Score difference with first non-orthologous sequence - L.thermotolerans:280 P.jiroveci:280

C5DDN1              	100.00%		L0PGD6              	100.00%
Bootstrap support for C5DDN1 as seed ortholog is 100%.
Bootstrap support for L0PGD6 as seed ortholog is 100%.

Group of orthologs #671. Best score 280 bits
Score difference with first non-orthologous sequence - L.thermotolerans:280 P.jiroveci:280

C5E3K6              	100.00%		L0P896              	100.00%
Bootstrap support for C5E3K6 as seed ortholog is 100%.
Bootstrap support for L0P896 as seed ortholog is 100%.

Group of orthologs #672. Best score 280 bits
Score difference with first non-orthologous sequence - L.thermotolerans:280 P.jiroveci:280

C5DLB2              	100.00%		L0PET7              	100.00%
Bootstrap support for C5DLB2 as seed ortholog is 100%.
Bootstrap support for L0PET7 as seed ortholog is 100%.

Group of orthologs #673. Best score 279 bits
Score difference with first non-orthologous sequence - L.thermotolerans:176 P.jiroveci:188

C5DK12              	100.00%		L0PCW4              	100.00%
                    	       		L0PFK8              	7.29%
Bootstrap support for C5DK12 as seed ortholog is 100%.
Bootstrap support for L0PCW4 as seed ortholog is 100%.

Group of orthologs #674. Best score 276 bits
Score difference with first non-orthologous sequence - L.thermotolerans:231 P.jiroveci:276

C5DJ52              	100.00%		L0PB03              	100.00%
Bootstrap support for C5DJ52 as seed ortholog is 100%.
Bootstrap support for L0PB03 as seed ortholog is 100%.

Group of orthologs #675. Best score 276 bits
Score difference with first non-orthologous sequence - L.thermotolerans:276 P.jiroveci:276

C5DKZ8              	100.00%		L0PFH5              	100.00%
Bootstrap support for C5DKZ8 as seed ortholog is 100%.
Bootstrap support for L0PFH5 as seed ortholog is 100%.

Group of orthologs #676. Best score 275 bits
Score difference with first non-orthologous sequence - L.thermotolerans:275 P.jiroveci:275

C5DGF3              	100.00%		L0P877              	100.00%
                    	       		L0PF47              	33.73%
Bootstrap support for C5DGF3 as seed ortholog is 100%.
Bootstrap support for L0P877 as seed ortholog is 100%.

Group of orthologs #677. Best score 275 bits
Score difference with first non-orthologous sequence - L.thermotolerans:175 P.jiroveci:185

C5DEY1              	100.00%		L0P9H7              	100.00%
Bootstrap support for C5DEY1 as seed ortholog is 100%.
Bootstrap support for L0P9H7 as seed ortholog is 100%.

Group of orthologs #678. Best score 275 bits
Score difference with first non-orthologous sequence - L.thermotolerans:275 P.jiroveci:275

C5DBX2              	100.00%		L0PDR1              	100.00%
Bootstrap support for C5DBX2 as seed ortholog is 100%.
Bootstrap support for L0PDR1 as seed ortholog is 100%.

Group of orthologs #679. Best score 275 bits
Score difference with first non-orthologous sequence - L.thermotolerans:275 P.jiroveci:275

C5DIG1              	100.00%		L0PCK8              	100.00%
Bootstrap support for C5DIG1 as seed ortholog is 100%.
Bootstrap support for L0PCK8 as seed ortholog is 100%.

Group of orthologs #680. Best score 275 bits
Score difference with first non-orthologous sequence - L.thermotolerans:275 P.jiroveci:275

C5DL81              	100.00%		L0PAM2              	100.00%
Bootstrap support for C5DL81 as seed ortholog is 100%.
Bootstrap support for L0PAM2 as seed ortholog is 100%.

Group of orthologs #681. Best score 274 bits
Score difference with first non-orthologous sequence - L.thermotolerans:274 P.jiroveci:274

C5DCB8              	100.00%		L0PHK5              	100.00%
Bootstrap support for C5DCB8 as seed ortholog is 100%.
Bootstrap support for L0PHK5 as seed ortholog is 100%.

Group of orthologs #682. Best score 274 bits
Score difference with first non-orthologous sequence - L.thermotolerans:274 P.jiroveci:274

C5DLQ2              	100.00%		L0PCU0              	100.00%
Bootstrap support for C5DLQ2 as seed ortholog is 100%.
Bootstrap support for L0PCU0 as seed ortholog is 100%.

Group of orthologs #683. Best score 272 bits
Score difference with first non-orthologous sequence - L.thermotolerans:272 P.jiroveci:272

C5DDZ4              	100.00%		L0PB31              	100.00%
Bootstrap support for C5DDZ4 as seed ortholog is 100%.
Bootstrap support for L0PB31 as seed ortholog is 100%.

Group of orthologs #684. Best score 272 bits
Score difference with first non-orthologous sequence - L.thermotolerans:272 P.jiroveci:272

C5DE64              	100.00%		L0PC53              	100.00%
Bootstrap support for C5DE64 as seed ortholog is 100%.
Bootstrap support for L0PC53 as seed ortholog is 100%.

Group of orthologs #685. Best score 272 bits
Score difference with first non-orthologous sequence - L.thermotolerans:50 P.jiroveci:174

C5E224              	100.00%		L0PB47              	100.00%
Bootstrap support for C5E224 as seed ortholog is 94%.
Bootstrap support for L0PB47 as seed ortholog is 99%.

Group of orthologs #686. Best score 272 bits
Score difference with first non-orthologous sequence - L.thermotolerans:156 P.jiroveci:272

C5E3G5              	100.00%		L0PEM3              	100.00%
Bootstrap support for C5E3G5 as seed ortholog is 100%.
Bootstrap support for L0PEM3 as seed ortholog is 100%.

Group of orthologs #687. Best score 271 bits
Score difference with first non-orthologous sequence - L.thermotolerans:271 P.jiroveci:271

C5DLP4              	100.00%		L0PFU1              	100.00%
Bootstrap support for C5DLP4 as seed ortholog is 100%.
Bootstrap support for L0PFU1 as seed ortholog is 100%.

Group of orthologs #688. Best score 270 bits
Score difference with first non-orthologous sequence - L.thermotolerans:270 P.jiroveci:270

C5DEC3              	100.00%		L0PF83              	100.00%
Bootstrap support for C5DEC3 as seed ortholog is 100%.
Bootstrap support for L0PF83 as seed ortholog is 100%.

Group of orthologs #689. Best score 270 bits
Score difference with first non-orthologous sequence - L.thermotolerans:270 P.jiroveci:270

C5E272              	100.00%		L0P996              	100.00%
Bootstrap support for C5E272 as seed ortholog is 100%.
Bootstrap support for L0P996 as seed ortholog is 100%.

Group of orthologs #690. Best score 270 bits
Score difference with first non-orthologous sequence - L.thermotolerans:270 P.jiroveci:270

C5DJM8              	100.00%		L0PGL6              	100.00%
Bootstrap support for C5DJM8 as seed ortholog is 100%.
Bootstrap support for L0PGL6 as seed ortholog is 100%.

Group of orthologs #691. Best score 270 bits
Score difference with first non-orthologous sequence - L.thermotolerans:270 P.jiroveci:270

C5E3D3              	100.00%		L0PFY6              	100.00%
Bootstrap support for C5E3D3 as seed ortholog is 100%.
Bootstrap support for L0PFY6 as seed ortholog is 100%.

Group of orthologs #692. Best score 269 bits
Score difference with first non-orthologous sequence - L.thermotolerans:269 P.jiroveci:269

C5DD81              	100.00%		L0P723              	100.00%
Bootstrap support for C5DD81 as seed ortholog is 100%.
Bootstrap support for L0P723 as seed ortholog is 100%.

Group of orthologs #693. Best score 269 bits
Score difference with first non-orthologous sequence - L.thermotolerans:269 P.jiroveci:141

C5E3Q2              	100.00%		L0PCY2              	100.00%
Bootstrap support for C5E3Q2 as seed ortholog is 100%.
Bootstrap support for L0PCY2 as seed ortholog is 99%.

Group of orthologs #694. Best score 268 bits
Score difference with first non-orthologous sequence - L.thermotolerans:268 P.jiroveci:268

C5DGH4              	100.00%		L0PBH8              	100.00%
Bootstrap support for C5DGH4 as seed ortholog is 100%.
Bootstrap support for L0PBH8 as seed ortholog is 100%.

Group of orthologs #695. Best score 268 bits
Score difference with first non-orthologous sequence - L.thermotolerans:268 P.jiroveci:268

C5DGT4              	100.00%		L0PG43              	100.00%
Bootstrap support for C5DGT4 as seed ortholog is 100%.
Bootstrap support for L0PG43 as seed ortholog is 100%.

Group of orthologs #696. Best score 267 bits
Score difference with first non-orthologous sequence - L.thermotolerans:267 P.jiroveci:267

C5DDW0              	100.00%		L0PCI0              	100.00%
Bootstrap support for C5DDW0 as seed ortholog is 100%.
Bootstrap support for L0PCI0 as seed ortholog is 100%.

Group of orthologs #697. Best score 267 bits
Score difference with first non-orthologous sequence - L.thermotolerans:172 P.jiroveci:267

C5DJ48              	100.00%		L0P7C8              	100.00%
Bootstrap support for C5DJ48 as seed ortholog is 99%.
Bootstrap support for L0P7C8 as seed ortholog is 100%.

Group of orthologs #698. Best score 265 bits
Score difference with first non-orthologous sequence - L.thermotolerans:176 P.jiroveci:168

C5DEQ1              	100.00%		L0P8I7              	100.00%
Bootstrap support for C5DEQ1 as seed ortholog is 100%.
Bootstrap support for L0P8I7 as seed ortholog is 100%.

Group of orthologs #699. Best score 265 bits
Score difference with first non-orthologous sequence - L.thermotolerans:130 P.jiroveci:265

C5DGK7              	100.00%		L0P8U3              	100.00%
Bootstrap support for C5DGK7 as seed ortholog is 99%.
Bootstrap support for L0P8U3 as seed ortholog is 100%.

Group of orthologs #700. Best score 265 bits
Score difference with first non-orthologous sequence - L.thermotolerans:265 P.jiroveci:265

C5DH42              	100.00%		L0PBK8              	100.00%
Bootstrap support for C5DH42 as seed ortholog is 100%.
Bootstrap support for L0PBK8 as seed ortholog is 100%.

Group of orthologs #701. Best score 265 bits
Score difference with first non-orthologous sequence - L.thermotolerans:265 P.jiroveci:265

C5E226              	100.00%		L0P9W5              	100.00%
Bootstrap support for C5E226 as seed ortholog is 100%.
Bootstrap support for L0P9W5 as seed ortholog is 100%.

Group of orthologs #702. Best score 264 bits
Score difference with first non-orthologous sequence - L.thermotolerans:264 P.jiroveci:264

C5DCU0              	100.00%		L0PCT1              	100.00%
Bootstrap support for C5DCU0 as seed ortholog is 100%.
Bootstrap support for L0PCT1 as seed ortholog is 100%.

Group of orthologs #703. Best score 264 bits
Score difference with first non-orthologous sequence - L.thermotolerans:133 P.jiroveci:264

C5DBI4              	100.00%		L0PG51              	100.00%
Bootstrap support for C5DBI4 as seed ortholog is 82%.
Bootstrap support for L0PG51 as seed ortholog is 100%.

Group of orthologs #704. Best score 264 bits
Score difference with first non-orthologous sequence - L.thermotolerans:264 P.jiroveci:264

C5DHY6              	100.00%		L0PBS3              	100.00%
Bootstrap support for C5DHY6 as seed ortholog is 100%.
Bootstrap support for L0PBS3 as seed ortholog is 100%.

Group of orthologs #705. Best score 264 bits
Score difference with first non-orthologous sequence - L.thermotolerans:264 P.jiroveci:264

C5DKM9              	100.00%		L0PFH7              	100.00%
Bootstrap support for C5DKM9 as seed ortholog is 100%.
Bootstrap support for L0PFH7 as seed ortholog is 100%.

Group of orthologs #706. Best score 264 bits
Score difference with first non-orthologous sequence - L.thermotolerans:264 P.jiroveci:264

C5E203              	100.00%		L0PHN0              	100.00%
Bootstrap support for C5E203 as seed ortholog is 100%.
Bootstrap support for L0PHN0 as seed ortholog is 100%.

Group of orthologs #707. Best score 263 bits
Score difference with first non-orthologous sequence - L.thermotolerans:82 P.jiroveci:263

C5DFC3              	100.00%		L0P8K2              	100.00%
Bootstrap support for C5DFC3 as seed ortholog is 95%.
Bootstrap support for L0P8K2 as seed ortholog is 100%.

Group of orthologs #708. Best score 263 bits
Score difference with first non-orthologous sequence - L.thermotolerans:263 P.jiroveci:263

C5DL53              	100.00%		L0PB28              	100.00%
Bootstrap support for C5DL53 as seed ortholog is 100%.
Bootstrap support for L0PB28 as seed ortholog is 100%.

Group of orthologs #709. Best score 263 bits
Score difference with first non-orthologous sequence - L.thermotolerans:263 P.jiroveci:263

C5E2U5              	100.00%		L0P8C3              	100.00%
Bootstrap support for C5E2U5 as seed ortholog is 100%.
Bootstrap support for L0P8C3 as seed ortholog is 100%.

Group of orthologs #710. Best score 263 bits
Score difference with first non-orthologous sequence - L.thermotolerans:263 P.jiroveci:263

C5E210              	100.00%		L0PEV7              	100.00%
Bootstrap support for C5E210 as seed ortholog is 100%.
Bootstrap support for L0PEV7 as seed ortholog is 100%.

Group of orthologs #711. Best score 262 bits
Score difference with first non-orthologous sequence - L.thermotolerans:262 P.jiroveci:262

C5DFY3              	100.00%		L0P9G1              	100.00%
Bootstrap support for C5DFY3 as seed ortholog is 100%.
Bootstrap support for L0P9G1 as seed ortholog is 100%.

Group of orthologs #712. Best score 262 bits
Score difference with first non-orthologous sequence - L.thermotolerans:176 P.jiroveci:262

C5DEX2              	100.00%		L0PBF9              	100.00%
Bootstrap support for C5DEX2 as seed ortholog is 100%.
Bootstrap support for L0PBF9 as seed ortholog is 100%.

Group of orthologs #713. Best score 262 bits
Score difference with first non-orthologous sequence - L.thermotolerans:262 P.jiroveci:262

C5DK83              	100.00%		L0P9K2              	100.00%
Bootstrap support for C5DK83 as seed ortholog is 100%.
Bootstrap support for L0P9K2 as seed ortholog is 100%.

Group of orthologs #714. Best score 262 bits
Score difference with first non-orthologous sequence - L.thermotolerans:74 P.jiroveci:137

C5E324              	100.00%		L0P8B4              	100.00%
Bootstrap support for C5E324 as seed ortholog is 94%.
Bootstrap support for L0P8B4 as seed ortholog is 99%.

Group of orthologs #715. Best score 261 bits
Score difference with first non-orthologous sequence - L.thermotolerans:261 P.jiroveci:261

C5DCE8              	100.00%		L0P9S7              	100.00%
Bootstrap support for C5DCE8 as seed ortholog is 100%.
Bootstrap support for L0P9S7 as seed ortholog is 100%.

Group of orthologs #716. Best score 261 bits
Score difference with first non-orthologous sequence - L.thermotolerans:49 P.jiroveci:261

C5DBN0              	100.00%		L0PDS3              	100.00%
Bootstrap support for C5DBN0 as seed ortholog is 94%.
Bootstrap support for L0PDS3 as seed ortholog is 100%.

Group of orthologs #717. Best score 261 bits
Score difference with first non-orthologous sequence - L.thermotolerans:261 P.jiroveci:261

C5E328              	100.00%		L0P9Z7              	100.00%
Bootstrap support for C5E328 as seed ortholog is 100%.
Bootstrap support for L0P9Z7 as seed ortholog is 100%.

Group of orthologs #718. Best score 260 bits
Score difference with first non-orthologous sequence - L.thermotolerans:260 P.jiroveci:260

C5DD20              	100.00%		L0PAL9              	100.00%
                    	       		L0PBY7              	43.31%
Bootstrap support for C5DD20 as seed ortholog is 100%.
Bootstrap support for L0PAL9 as seed ortholog is 100%.

Group of orthologs #719. Best score 260 bits
Score difference with first non-orthologous sequence - L.thermotolerans:260 P.jiroveci:260

C5DFJ4              	100.00%		L0P9I3              	100.00%
Bootstrap support for C5DFJ4 as seed ortholog is 100%.
Bootstrap support for L0P9I3 as seed ortholog is 100%.

Group of orthologs #720. Best score 260 bits
Score difference with first non-orthologous sequence - L.thermotolerans:260 P.jiroveci:260

C5DGQ2              	100.00%		L0PDJ2              	100.00%
Bootstrap support for C5DGQ2 as seed ortholog is 100%.
Bootstrap support for L0PDJ2 as seed ortholog is 100%.

Group of orthologs #721. Best score 260 bits
Score difference with first non-orthologous sequence - L.thermotolerans:260 P.jiroveci:260

C5DJ37              	100.00%		L0PFC0              	100.00%
Bootstrap support for C5DJ37 as seed ortholog is 100%.
Bootstrap support for L0PFC0 as seed ortholog is 100%.

Group of orthologs #722. Best score 260 bits
Score difference with first non-orthologous sequence - L.thermotolerans:260 P.jiroveci:260

C5E2A0              	100.00%		L0PD58              	100.00%
Bootstrap support for C5E2A0 as seed ortholog is 100%.
Bootstrap support for L0PD58 as seed ortholog is 100%.

Group of orthologs #723. Best score 260 bits
Score difference with first non-orthologous sequence - L.thermotolerans:260 P.jiroveci:260

C5DN67              	100.00%		L0PHH2              	100.00%
Bootstrap support for C5DN67 as seed ortholog is 100%.
Bootstrap support for L0PHH2 as seed ortholog is 100%.

Group of orthologs #724. Best score 259 bits
Score difference with first non-orthologous sequence - L.thermotolerans:259 P.jiroveci:259

C5DJJ0              	100.00%		L0PAG8              	100.00%
Bootstrap support for C5DJJ0 as seed ortholog is 100%.
Bootstrap support for L0PAG8 as seed ortholog is 100%.

Group of orthologs #725. Best score 259 bits
Score difference with first non-orthologous sequence - L.thermotolerans:259 P.jiroveci:259

C5DIY2              	100.00%		L0PFN8              	100.00%
Bootstrap support for C5DIY2 as seed ortholog is 100%.
Bootstrap support for L0PFN8 as seed ortholog is 100%.

Group of orthologs #726. Best score 259 bits
Score difference with first non-orthologous sequence - L.thermotolerans:259 P.jiroveci:259

C5DLY0              	100.00%		L0PDH2              	100.00%
Bootstrap support for C5DLY0 as seed ortholog is 100%.
Bootstrap support for L0PDH2 as seed ortholog is 100%.

Group of orthologs #727. Best score 258 bits
Score difference with first non-orthologous sequence - L.thermotolerans:174 P.jiroveci:258

C5DJE6              	100.00%		L0PC75              	100.00%
Bootstrap support for C5DJE6 as seed ortholog is 100%.
Bootstrap support for L0PC75 as seed ortholog is 100%.

Group of orthologs #728. Best score 258 bits
Score difference with first non-orthologous sequence - L.thermotolerans:258 P.jiroveci:258

C5DHZ7              	100.00%		L0PF06              	100.00%
Bootstrap support for C5DHZ7 as seed ortholog is 100%.
Bootstrap support for L0PF06 as seed ortholog is 100%.

Group of orthologs #729. Best score 258 bits
Score difference with first non-orthologous sequence - L.thermotolerans:258 P.jiroveci:258

C5E2L6              	100.00%		L0PAP4              	100.00%
Bootstrap support for C5E2L6 as seed ortholog is 100%.
Bootstrap support for L0PAP4 as seed ortholog is 100%.

Group of orthologs #730. Best score 258 bits
Score difference with first non-orthologous sequence - L.thermotolerans:258 P.jiroveci:258

C5DL74              	100.00%		L0PHK3              	100.00%
Bootstrap support for C5DL74 as seed ortholog is 100%.
Bootstrap support for L0PHK3 as seed ortholog is 100%.

Group of orthologs #731. Best score 257 bits
Score difference with first non-orthologous sequence - L.thermotolerans:101 P.jiroveci:257

C5E3E9              	100.00%		L0P848              	100.00%
                    	       		L0P867              	88.89%
Bootstrap support for C5E3E9 as seed ortholog is 96%.
Bootstrap support for L0P848 as seed ortholog is 100%.

Group of orthologs #732. Best score 257 bits
Score difference with first non-orthologous sequence - L.thermotolerans:257 P.jiroveci:257

C5DCQ1              	100.00%		L0PBY9              	100.00%
Bootstrap support for C5DCQ1 as seed ortholog is 100%.
Bootstrap support for L0PBY9 as seed ortholog is 100%.

Group of orthologs #733. Best score 257 bits
Score difference with first non-orthologous sequence - L.thermotolerans:257 P.jiroveci:257

C5DCR3              	100.00%		L0PGD9              	100.00%
Bootstrap support for C5DCR3 as seed ortholog is 100%.
Bootstrap support for L0PGD9 as seed ortholog is 100%.

Group of orthologs #734. Best score 256 bits
Score difference with first non-orthologous sequence - L.thermotolerans:256 P.jiroveci:256

C5DE55              	100.00%		L0PGV2              	100.00%
                    	       		L0PG40              	61.25%
Bootstrap support for C5DE55 as seed ortholog is 100%.
Bootstrap support for L0PGV2 as seed ortholog is 100%.

Group of orthologs #735. Best score 256 bits
Score difference with first non-orthologous sequence - L.thermotolerans:256 P.jiroveci:256

C5DFN4              	100.00%		L0PE53              	100.00%
Bootstrap support for C5DFN4 as seed ortholog is 100%.
Bootstrap support for L0PE53 as seed ortholog is 100%.

Group of orthologs #736. Best score 256 bits
Score difference with first non-orthologous sequence - L.thermotolerans:256 P.jiroveci:256

C5DGE5              	100.00%		L0PF87              	100.00%
Bootstrap support for C5DGE5 as seed ortholog is 100%.
Bootstrap support for L0PF87 as seed ortholog is 100%.

Group of orthologs #737. Best score 256 bits
Score difference with first non-orthologous sequence - L.thermotolerans:256 P.jiroveci:256

C5DJ85              	100.00%		L0PGN8              	100.00%
Bootstrap support for C5DJ85 as seed ortholog is 100%.
Bootstrap support for L0PGN8 as seed ortholog is 100%.

Group of orthologs #738. Best score 256 bits
Score difference with first non-orthologous sequence - L.thermotolerans:256 P.jiroveci:256

C5DLG4              	100.00%		L0PF79              	100.00%
Bootstrap support for C5DLG4 as seed ortholog is 100%.
Bootstrap support for L0PF79 as seed ortholog is 100%.

Group of orthologs #739. Best score 256 bits
Score difference with first non-orthologous sequence - L.thermotolerans:256 P.jiroveci:256

C5DM67              	100.00%		L0PGV8              	100.00%
Bootstrap support for C5DM67 as seed ortholog is 100%.
Bootstrap support for L0PGV8 as seed ortholog is 100%.

Group of orthologs #740. Best score 255 bits
Score difference with first non-orthologous sequence - L.thermotolerans:17 P.jiroveci:255

C5DCJ8              	100.00%		L0PBD0              	100.00%
Bootstrap support for C5DCJ8 as seed ortholog is 56%.
Alternative seed ortholog is C5DCJ9 (17 bits away from this cluster)
Bootstrap support for L0PBD0 as seed ortholog is 100%.

Group of orthologs #741. Best score 255 bits
Score difference with first non-orthologous sequence - L.thermotolerans:255 P.jiroveci:255

C5DD51              	100.00%		L0PCG1              	100.00%
Bootstrap support for C5DD51 as seed ortholog is 100%.
Bootstrap support for L0PCG1 as seed ortholog is 100%.

Group of orthologs #742. Best score 255 bits
Score difference with first non-orthologous sequence - L.thermotolerans:143 P.jiroveci:161

C5DIQ2              	100.00%		L0P876              	100.00%
Bootstrap support for C5DIQ2 as seed ortholog is 100%.
Bootstrap support for L0P876 as seed ortholog is 100%.

Group of orthologs #743. Best score 255 bits
Score difference with first non-orthologous sequence - L.thermotolerans:186 P.jiroveci:255

C5DIE6              	100.00%		L0PD97              	100.00%
Bootstrap support for C5DIE6 as seed ortholog is 100%.
Bootstrap support for L0PD97 as seed ortholog is 100%.

Group of orthologs #744. Best score 255 bits
Score difference with first non-orthologous sequence - L.thermotolerans:255 P.jiroveci:255

C5E285              	100.00%		L0P6T8              	100.00%
Bootstrap support for C5E285 as seed ortholog is 100%.
Bootstrap support for L0P6T8 as seed ortholog is 100%.

Group of orthologs #745. Best score 254 bits
Score difference with first non-orthologous sequence - L.thermotolerans:254 P.jiroveci:254

C5E213              	100.00%		L0PAU4              	100.00%
Bootstrap support for C5E213 as seed ortholog is 100%.
Bootstrap support for L0PAU4 as seed ortholog is 100%.

Group of orthologs #746. Best score 254 bits
Score difference with first non-orthologous sequence - L.thermotolerans:99 P.jiroveci:254

C5DLM9              	100.00%		L0PFH2              	100.00%
Bootstrap support for C5DLM9 as seed ortholog is 97%.
Bootstrap support for L0PFH2 as seed ortholog is 100%.

Group of orthologs #747. Best score 253 bits
Score difference with first non-orthologous sequence - L.thermotolerans:54 P.jiroveci:253

C5DDH9              	100.00%		L0PDF9              	100.00%
Bootstrap support for C5DDH9 as seed ortholog is 92%.
Bootstrap support for L0PDF9 as seed ortholog is 100%.

Group of orthologs #748. Best score 253 bits
Score difference with first non-orthologous sequence - L.thermotolerans:253 P.jiroveci:253

C5DJQ0              	100.00%		L0P8N3              	100.00%
Bootstrap support for C5DJQ0 as seed ortholog is 100%.
Bootstrap support for L0P8N3 as seed ortholog is 100%.

Group of orthologs #749. Best score 253 bits
Score difference with first non-orthologous sequence - L.thermotolerans:253 P.jiroveci:253

C5DHQ6              	100.00%		L0PDE5              	100.00%
Bootstrap support for C5DHQ6 as seed ortholog is 100%.
Bootstrap support for L0PDE5 as seed ortholog is 100%.

Group of orthologs #750. Best score 253 bits
Score difference with first non-orthologous sequence - L.thermotolerans:93 P.jiroveci:253

C5DGL3              	100.00%		L0PFU2              	100.00%
Bootstrap support for C5DGL3 as seed ortholog is 99%.
Bootstrap support for L0PFU2 as seed ortholog is 100%.

Group of orthologs #751. Best score 253 bits
Score difference with first non-orthologous sequence - L.thermotolerans:253 P.jiroveci:208

C5DLC6              	100.00%		L0PB18              	100.00%
Bootstrap support for C5DLC6 as seed ortholog is 100%.
Bootstrap support for L0PB18 as seed ortholog is 100%.

Group of orthologs #752. Best score 252 bits
Score difference with first non-orthologous sequence - L.thermotolerans:90 P.jiroveci:10

C5E253              	100.00%		L0P9E4              	100.00%
C5E252              	83.04%		
Bootstrap support for C5E253 as seed ortholog is 99%.
Bootstrap support for L0P9E4 as seed ortholog is 66%.
Alternative seed ortholog is L0PC59 (10 bits away from this cluster)

Group of orthologs #753. Best score 252 bits
Score difference with first non-orthologous sequence - L.thermotolerans:252 P.jiroveci:252

C5DJ79              	100.00%		L0PHL1              	100.00%
Bootstrap support for C5DJ79 as seed ortholog is 100%.
Bootstrap support for L0PHL1 as seed ortholog is 100%.

Group of orthologs #754. Best score 250 bits
Score difference with first non-orthologous sequence - L.thermotolerans:168 P.jiroveci:250

C5DNG1              	100.00%		L0P913              	100.00%
Bootstrap support for C5DNG1 as seed ortholog is 100%.
Bootstrap support for L0P913 as seed ortholog is 100%.

Group of orthologs #755. Best score 249 bits
Score difference with first non-orthologous sequence - L.thermotolerans:191 P.jiroveci:249

C5DCH4              	100.00%		L0P839              	100.00%
Bootstrap support for C5DCH4 as seed ortholog is 100%.
Bootstrap support for L0P839 as seed ortholog is 100%.

Group of orthologs #756. Best score 249 bits
Score difference with first non-orthologous sequence - L.thermotolerans:185 P.jiroveci:249

C5DD40              	100.00%		L0PBL5              	100.00%
Bootstrap support for C5DD40 as seed ortholog is 100%.
Bootstrap support for L0PBL5 as seed ortholog is 100%.

Group of orthologs #757. Best score 248 bits
Score difference with first non-orthologous sequence - L.thermotolerans:248 P.jiroveci:248

C5DDS7              	100.00%		L0PD65              	100.00%
Bootstrap support for C5DDS7 as seed ortholog is 100%.
Bootstrap support for L0PD65 as seed ortholog is 100%.

Group of orthologs #758. Best score 248 bits
Score difference with first non-orthologous sequence - L.thermotolerans:64 P.jiroveci:185

C5DJ20              	100.00%		L0PFZ5              	100.00%
Bootstrap support for C5DJ20 as seed ortholog is 97%.
Bootstrap support for L0PFZ5 as seed ortholog is 100%.

Group of orthologs #759. Best score 248 bits
Score difference with first non-orthologous sequence - L.thermotolerans:73 P.jiroveci:248

C5DM17              	100.00%		L0PEF1              	100.00%
Bootstrap support for C5DM17 as seed ortholog is 97%.
Bootstrap support for L0PEF1 as seed ortholog is 100%.

Group of orthologs #760. Best score 248 bits
Score difference with first non-orthologous sequence - L.thermotolerans:248 P.jiroveci:248

C5DMM1              	100.00%		L0PET8              	100.00%
Bootstrap support for C5DMM1 as seed ortholog is 100%.
Bootstrap support for L0PET8 as seed ortholog is 100%.

Group of orthologs #761. Best score 247 bits
Score difference with first non-orthologous sequence - L.thermotolerans:112 P.jiroveci:247

C5DCM4              	100.00%		L0P983              	100.00%
Bootstrap support for C5DCM4 as seed ortholog is 97%.
Bootstrap support for L0P983 as seed ortholog is 100%.

Group of orthologs #762. Best score 247 bits
Score difference with first non-orthologous sequence - L.thermotolerans:247 P.jiroveci:247

C5DFG1              	100.00%		L0PA05              	100.00%
Bootstrap support for C5DFG1 as seed ortholog is 100%.
Bootstrap support for L0PA05 as seed ortholog is 100%.

Group of orthologs #763. Best score 247 bits
Score difference with first non-orthologous sequence - L.thermotolerans:247 P.jiroveci:247

C5DDZ8              	100.00%		L0PF73              	100.00%
Bootstrap support for C5DDZ8 as seed ortholog is 100%.
Bootstrap support for L0PF73 as seed ortholog is 100%.

Group of orthologs #764. Best score 247 bits
Score difference with first non-orthologous sequence - L.thermotolerans:247 P.jiroveci:247

C5DE16              	100.00%		L0PG06              	100.00%
Bootstrap support for C5DE16 as seed ortholog is 100%.
Bootstrap support for L0PG06 as seed ortholog is 100%.

Group of orthologs #765. Best score 247 bits
Score difference with first non-orthologous sequence - L.thermotolerans:247 P.jiroveci:247

C5DL28              	100.00%		L0PGW6              	100.00%
Bootstrap support for C5DL28 as seed ortholog is 100%.
Bootstrap support for L0PGW6 as seed ortholog is 100%.

Group of orthologs #766. Best score 246 bits
Score difference with first non-orthologous sequence - L.thermotolerans:246 P.jiroveci:246

C5DIZ2              	100.00%		L0PGX9              	100.00%
Bootstrap support for C5DIZ2 as seed ortholog is 100%.
Bootstrap support for L0PGX9 as seed ortholog is 100%.

Group of orthologs #767. Best score 245 bits
Score difference with first non-orthologous sequence - L.thermotolerans:245 P.jiroveci:245

C5DMA7              	100.00%		L0P7K4              	100.00%
                    	       		L0P859              	81.20%
Bootstrap support for C5DMA7 as seed ortholog is 100%.
Bootstrap support for L0P7K4 as seed ortholog is 100%.

Group of orthologs #768. Best score 245 bits
Score difference with first non-orthologous sequence - L.thermotolerans:245 P.jiroveci:245

C5DBH0              	100.00%		L0P9G9              	100.00%
Bootstrap support for C5DBH0 as seed ortholog is 100%.
Bootstrap support for L0P9G9 as seed ortholog is 100%.

Group of orthologs #769. Best score 245 bits
Score difference with first non-orthologous sequence - L.thermotolerans:245 P.jiroveci:245

C5DIR9              	100.00%		L0P8G2              	100.00%
Bootstrap support for C5DIR9 as seed ortholog is 100%.
Bootstrap support for L0P8G2 as seed ortholog is 100%.

Group of orthologs #770. Best score 245 bits
Score difference with first non-orthologous sequence - L.thermotolerans:245 P.jiroveci:245

C5DJE0              	100.00%		L0P8T4              	100.00%
Bootstrap support for C5DJE0 as seed ortholog is 100%.
Bootstrap support for L0P8T4 as seed ortholog is 100%.

Group of orthologs #771. Best score 245 bits
Score difference with first non-orthologous sequence - L.thermotolerans:245 P.jiroveci:245

C5DH57              	100.00%		L0PDL5              	100.00%
Bootstrap support for C5DH57 as seed ortholog is 100%.
Bootstrap support for L0PDL5 as seed ortholog is 100%.

Group of orthologs #772. Best score 244 bits
Score difference with first non-orthologous sequence - L.thermotolerans:244 P.jiroveci:244

C5DDA1              	100.00%		L0PE17              	100.00%
Bootstrap support for C5DDA1 as seed ortholog is 100%.
Bootstrap support for L0PE17 as seed ortholog is 100%.

Group of orthologs #773. Best score 244 bits
Score difference with first non-orthologous sequence - L.thermotolerans:244 P.jiroveci:244

C5E2R9              	100.00%		L0PBV8              	100.00%
Bootstrap support for C5E2R9 as seed ortholog is 100%.
Bootstrap support for L0PBV8 as seed ortholog is 100%.

Group of orthologs #774. Best score 244 bits
Score difference with first non-orthologous sequence - L.thermotolerans:244 P.jiroveci:244

C5DKU4              	100.00%		L0PFV3              	100.00%
Bootstrap support for C5DKU4 as seed ortholog is 100%.
Bootstrap support for L0PFV3 as seed ortholog is 100%.

Group of orthologs #775. Best score 243 bits
Score difference with first non-orthologous sequence - L.thermotolerans:243 P.jiroveci:243

C5DBM9              	100.00%		L0P7C4              	100.00%
Bootstrap support for C5DBM9 as seed ortholog is 100%.
Bootstrap support for L0P7C4 as seed ortholog is 100%.

Group of orthologs #776. Best score 243 bits
Score difference with first non-orthologous sequence - L.thermotolerans:152 P.jiroveci:145

C5DF73              	100.00%		L0PH42              	100.00%
Bootstrap support for C5DF73 as seed ortholog is 99%.
Bootstrap support for L0PH42 as seed ortholog is 99%.

Group of orthologs #777. Best score 243 bits
Score difference with first non-orthologous sequence - L.thermotolerans:59 P.jiroveci:87

C5DJ23              	100.00%		L0PG10              	100.00%
Bootstrap support for C5DJ23 as seed ortholog is 91%.
Bootstrap support for L0PG10 as seed ortholog is 99%.

Group of orthologs #778. Best score 242 bits
Score difference with first non-orthologous sequence - L.thermotolerans:242 P.jiroveci:242

C5DHW8              	100.00%		L0P8T6              	100.00%
Bootstrap support for C5DHW8 as seed ortholog is 100%.
Bootstrap support for L0P8T6 as seed ortholog is 100%.

Group of orthologs #779. Best score 242 bits
Score difference with first non-orthologous sequence - L.thermotolerans:242 P.jiroveci:242

C5DHE9              	100.00%		L0PCC6              	100.00%
Bootstrap support for C5DHE9 as seed ortholog is 100%.
Bootstrap support for L0PCC6 as seed ortholog is 100%.

Group of orthologs #780. Best score 242 bits
Score difference with first non-orthologous sequence - L.thermotolerans:242 P.jiroveci:242

C5DNP2              	100.00%		L0PG17              	100.00%
Bootstrap support for C5DNP2 as seed ortholog is 100%.
Bootstrap support for L0PG17 as seed ortholog is 100%.

Group of orthologs #781. Best score 241 bits
Score difference with first non-orthologous sequence - L.thermotolerans:90 P.jiroveci:97

C5DJR8              	100.00%		L0PGE5              	100.00%
C5DJR9              	52.57%		
Bootstrap support for C5DJR8 as seed ortholog is 99%.
Bootstrap support for L0PGE5 as seed ortholog is 99%.

Group of orthologs #782. Best score 241 bits
Score difference with first non-orthologous sequence - L.thermotolerans:241 P.jiroveci:241

C5DED0              	100.00%		L0PFD8              	100.00%
Bootstrap support for C5DED0 as seed ortholog is 100%.
Bootstrap support for L0PFD8 as seed ortholog is 100%.

Group of orthologs #783. Best score 241 bits
Score difference with first non-orthologous sequence - L.thermotolerans:241 P.jiroveci:241

C5DEQ3              	100.00%		L0PHD0              	100.00%
Bootstrap support for C5DEQ3 as seed ortholog is 100%.
Bootstrap support for L0PHD0 as seed ortholog is 100%.

Group of orthologs #784. Best score 241 bits
Score difference with first non-orthologous sequence - L.thermotolerans:53 P.jiroveci:241

C5DN27              	100.00%		L0PDD1              	100.00%
Bootstrap support for C5DN27 as seed ortholog is 90%.
Bootstrap support for L0PDD1 as seed ortholog is 100%.

Group of orthologs #785. Best score 240 bits
Score difference with first non-orthologous sequence - L.thermotolerans:240 P.jiroveci:240

C5DMX8              	100.00%		L0PEJ7              	100.00%
Bootstrap support for C5DMX8 as seed ortholog is 100%.
Bootstrap support for L0PEJ7 as seed ortholog is 100%.

Group of orthologs #786. Best score 239 bits
Score difference with first non-orthologous sequence - L.thermotolerans:239 P.jiroveci:239

C5DHG4              	100.00%		L0PD70              	100.00%
                    	       		L0P9Q7              	79.22%
Bootstrap support for C5DHG4 as seed ortholog is 100%.
Bootstrap support for L0PD70 as seed ortholog is 100%.

Group of orthologs #787. Best score 239 bits
Score difference with first non-orthologous sequence - L.thermotolerans:64 P.jiroveci:239

C5DNE9              	100.00%		L0PFS1              	100.00%
Bootstrap support for C5DNE9 as seed ortholog is 98%.
Bootstrap support for L0PFS1 as seed ortholog is 100%.

Group of orthologs #788. Best score 238 bits
Score difference with first non-orthologous sequence - L.thermotolerans:157 P.jiroveci:238

C5DE37              	100.00%		L0P9S9              	100.00%
C5DMP6              	8.76%		L0PDT3              	36.55%
Bootstrap support for C5DE37 as seed ortholog is 99%.
Bootstrap support for L0P9S9 as seed ortholog is 100%.

Group of orthologs #789. Best score 238 bits
Score difference with first non-orthologous sequence - L.thermotolerans:238 P.jiroveci:238

C5DC00              	100.00%		L0PAR5              	100.00%
Bootstrap support for C5DC00 as seed ortholog is 100%.
Bootstrap support for L0PAR5 as seed ortholog is 100%.

Group of orthologs #790. Best score 238 bits
Score difference with first non-orthologous sequence - L.thermotolerans:238 P.jiroveci:238

C5DHD2              	100.00%		L0PCB3              	100.00%
Bootstrap support for C5DHD2 as seed ortholog is 100%.
Bootstrap support for L0PCB3 as seed ortholog is 100%.

Group of orthologs #791. Best score 238 bits
Score difference with first non-orthologous sequence - L.thermotolerans:238 P.jiroveci:238

C5E3D5              	100.00%		L0P8J2              	100.00%
Bootstrap support for C5E3D5 as seed ortholog is 100%.
Bootstrap support for L0P8J2 as seed ortholog is 100%.

Group of orthologs #792. Best score 238 bits
Score difference with first non-orthologous sequence - L.thermotolerans:238 P.jiroveci:238

C5DN30              	100.00%		L0PE05              	100.00%
Bootstrap support for C5DN30 as seed ortholog is 100%.
Bootstrap support for L0PE05 as seed ortholog is 100%.

Group of orthologs #793. Best score 237 bits
Score difference with first non-orthologous sequence - L.thermotolerans:39 P.jiroveci:130

C5DDC3              	100.00%		L0PBE5              	100.00%
C5DNT4              	50.85%		
Bootstrap support for C5DDC3 as seed ortholog is 80%.
Bootstrap support for L0PBE5 as seed ortholog is 99%.

Group of orthologs #794. Best score 237 bits
Score difference with first non-orthologous sequence - L.thermotolerans:237 P.jiroveci:237

C5DFS3              	100.00%		L0P8K8              	100.00%
Bootstrap support for C5DFS3 as seed ortholog is 100%.
Bootstrap support for L0P8K8 as seed ortholog is 100%.

Group of orthologs #795. Best score 237 bits
Score difference with first non-orthologous sequence - L.thermotolerans:237 P.jiroveci:237

C5DIZ8              	100.00%		L0PAJ0              	100.00%
Bootstrap support for C5DIZ8 as seed ortholog is 100%.
Bootstrap support for L0PAJ0 as seed ortholog is 100%.

Group of orthologs #796. Best score 237 bits
Score difference with first non-orthologous sequence - L.thermotolerans:190 P.jiroveci:237

C5DMD0              	100.00%		L0P8J9              	100.00%
Bootstrap support for C5DMD0 as seed ortholog is 100%.
Bootstrap support for L0P8J9 as seed ortholog is 100%.

Group of orthologs #797. Best score 237 bits
Score difference with first non-orthologous sequence - L.thermotolerans:237 P.jiroveci:237

C5DK52              	100.00%		L0PFB5              	100.00%
Bootstrap support for C5DK52 as seed ortholog is 100%.
Bootstrap support for L0PFB5 as seed ortholog is 100%.

Group of orthologs #798. Best score 236 bits
Score difference with first non-orthologous sequence - L.thermotolerans:236 P.jiroveci:236

C5DKH1              	100.00%		L0P935              	100.00%
Bootstrap support for C5DKH1 as seed ortholog is 100%.
Bootstrap support for L0P935 as seed ortholog is 100%.

Group of orthologs #799. Best score 236 bits
Score difference with first non-orthologous sequence - L.thermotolerans:236 P.jiroveci:236

C5E2L2              	100.00%		L0PBD4              	100.00%
Bootstrap support for C5E2L2 as seed ortholog is 100%.
Bootstrap support for L0PBD4 as seed ortholog is 100%.

Group of orthologs #800. Best score 235 bits
Score difference with first non-orthologous sequence - L.thermotolerans:235 P.jiroveci:235

C5DKY4              	100.00%		L0P835              	100.00%
                    	       		L0P8K6              	24.46%
Bootstrap support for C5DKY4 as seed ortholog is 100%.
Bootstrap support for L0P835 as seed ortholog is 100%.

Group of orthologs #801. Best score 235 bits
Score difference with first non-orthologous sequence - L.thermotolerans:235 P.jiroveci:235

C5DE45              	100.00%		L0P9B5              	100.00%
Bootstrap support for C5DE45 as seed ortholog is 100%.
Bootstrap support for L0P9B5 as seed ortholog is 100%.

Group of orthologs #802. Best score 235 bits
Score difference with first non-orthologous sequence - L.thermotolerans:235 P.jiroveci:235

C5DL85              	100.00%		L0PC61              	100.00%
Bootstrap support for C5DL85 as seed ortholog is 100%.
Bootstrap support for L0PC61 as seed ortholog is 100%.

Group of orthologs #803. Best score 235 bits
Score difference with first non-orthologous sequence - L.thermotolerans:235 P.jiroveci:235

C5DNI2              	100.00%		L0PDA9              	100.00%
Bootstrap support for C5DNI2 as seed ortholog is 100%.
Bootstrap support for L0PDA9 as seed ortholog is 100%.

Group of orthologs #804. Best score 235 bits
Score difference with first non-orthologous sequence - L.thermotolerans:235 P.jiroveci:235

C5DMD9              	100.00%		L0PFR9              	100.00%
Bootstrap support for C5DMD9 as seed ortholog is 100%.
Bootstrap support for L0PFR9 as seed ortholog is 100%.

Group of orthologs #805. Best score 235 bits
Score difference with first non-orthologous sequence - L.thermotolerans:235 P.jiroveci:235

C5DMT0              	100.00%		L0PI09              	100.00%
Bootstrap support for C5DMT0 as seed ortholog is 100%.
Bootstrap support for L0PI09 as seed ortholog is 100%.

Group of orthologs #806. Best score 234 bits
Score difference with first non-orthologous sequence - L.thermotolerans:234 P.jiroveci:234

C5DE58              	100.00%		L0PBK2              	100.00%
Bootstrap support for C5DE58 as seed ortholog is 100%.
Bootstrap support for L0PBK2 as seed ortholog is 100%.

Group of orthologs #807. Best score 233 bits
Score difference with first non-orthologous sequence - L.thermotolerans:233 P.jiroveci:233

C5DJ45              	100.00%		L0P9P5              	100.00%
C5DBM2              	10.57%		
Bootstrap support for C5DJ45 as seed ortholog is 100%.
Bootstrap support for L0P9P5 as seed ortholog is 100%.

Group of orthologs #808. Best score 233 bits
Score difference with first non-orthologous sequence - L.thermotolerans:233 P.jiroveci:233

C5DGQ5              	100.00%		L0P8T9              	100.00%
Bootstrap support for C5DGQ5 as seed ortholog is 100%.
Bootstrap support for L0P8T9 as seed ortholog is 100%.

Group of orthologs #809. Best score 233 bits
Score difference with first non-orthologous sequence - L.thermotolerans:233 P.jiroveci:233

C5DDL6              	100.00%		L0PEZ4              	100.00%
Bootstrap support for C5DDL6 as seed ortholog is 100%.
Bootstrap support for L0PEZ4 as seed ortholog is 100%.

Group of orthologs #810. Best score 233 bits
Score difference with first non-orthologous sequence - L.thermotolerans:233 P.jiroveci:233

C5DLI6              	100.00%		L0P9C4              	100.00%
Bootstrap support for C5DLI6 as seed ortholog is 100%.
Bootstrap support for L0P9C4 as seed ortholog is 100%.

Group of orthologs #811. Best score 233 bits
Score difference with first non-orthologous sequence - L.thermotolerans:233 P.jiroveci:233

C5DIE8              	100.00%		L0PEZ1              	100.00%
Bootstrap support for C5DIE8 as seed ortholog is 100%.
Bootstrap support for L0PEZ1 as seed ortholog is 100%.

Group of orthologs #812. Best score 232 bits
Score difference with first non-orthologous sequence - L.thermotolerans:232 P.jiroveci:232

C5DBA3              	100.00%		L0PDT8              	100.00%
                    	       		L0P9R2              	90.74%
Bootstrap support for C5DBA3 as seed ortholog is 100%.
Bootstrap support for L0PDT8 as seed ortholog is 100%.

Group of orthologs #813. Best score 232 bits
Score difference with first non-orthologous sequence - L.thermotolerans:232 P.jiroveci:232

C5DJJ2              	100.00%		L0PAQ7              	100.00%
Bootstrap support for C5DJJ2 as seed ortholog is 100%.
Bootstrap support for L0PAQ7 as seed ortholog is 100%.

Group of orthologs #814. Best score 232 bits
Score difference with first non-orthologous sequence - L.thermotolerans:91 P.jiroveci:232

C5DLV5              	100.00%		L0P967              	100.00%
Bootstrap support for C5DLV5 as seed ortholog is 97%.
Bootstrap support for L0P967 as seed ortholog is 100%.

Group of orthologs #815. Best score 232 bits
Score difference with first non-orthologous sequence - L.thermotolerans:117 P.jiroveci:132

C5DEM2              	100.00%		L0PGP6              	100.00%
Bootstrap support for C5DEM2 as seed ortholog is 99%.
Bootstrap support for L0PGP6 as seed ortholog is 99%.

Group of orthologs #816. Best score 232 bits
Score difference with first non-orthologous sequence - L.thermotolerans:232 P.jiroveci:232

C5DLM8              	100.00%		L0PA77              	100.00%
Bootstrap support for C5DLM8 as seed ortholog is 100%.
Bootstrap support for L0PA77 as seed ortholog is 100%.

Group of orthologs #817. Best score 231 bits
Score difference with first non-orthologous sequence - L.thermotolerans:105 P.jiroveci:78

C5DGT0              	100.00%		L0PA17              	100.00%
Bootstrap support for C5DGT0 as seed ortholog is 99%.
Bootstrap support for L0PA17 as seed ortholog is 99%.

Group of orthologs #818. Best score 231 bits
Score difference with first non-orthologous sequence - L.thermotolerans:231 P.jiroveci:231

C5DJQ3              	100.00%		L0PFJ8              	100.00%
Bootstrap support for C5DJQ3 as seed ortholog is 100%.
Bootstrap support for L0PFJ8 as seed ortholog is 100%.

Group of orthologs #819. Best score 230 bits
Score difference with first non-orthologous sequence - L.thermotolerans:230 P.jiroveci:230

C5DN82              	100.00%		L0PG39              	100.00%
Bootstrap support for C5DN82 as seed ortholog is 100%.
Bootstrap support for L0PG39 as seed ortholog is 100%.

Group of orthologs #820. Best score 229 bits
Score difference with first non-orthologous sequence - L.thermotolerans:186 P.jiroveci:229

C5DE75              	100.00%		L0PB84              	100.00%
Bootstrap support for C5DE75 as seed ortholog is 100%.
Bootstrap support for L0PB84 as seed ortholog is 100%.

Group of orthologs #821. Best score 229 bits
Score difference with first non-orthologous sequence - L.thermotolerans:229 P.jiroveci:229

C5DK82              	100.00%		L0P799              	100.00%
Bootstrap support for C5DK82 as seed ortholog is 100%.
Bootstrap support for L0P799 as seed ortholog is 100%.

Group of orthologs #822. Best score 228 bits
Score difference with first non-orthologous sequence - L.thermotolerans:93 P.jiroveci:228

C5DDI2              	100.00%		L0PE61              	100.00%
C5DI45              	16.71%		
Bootstrap support for C5DDI2 as seed ortholog is 98%.
Bootstrap support for L0PE61 as seed ortholog is 100%.

Group of orthologs #823. Best score 228 bits
Score difference with first non-orthologous sequence - L.thermotolerans:228 P.jiroveci:228

C5DG60              	100.00%		L0P948              	100.00%
Bootstrap support for C5DG60 as seed ortholog is 100%.
Bootstrap support for L0P948 as seed ortholog is 100%.

Group of orthologs #824. Best score 228 bits
Score difference with first non-orthologous sequence - L.thermotolerans:73 P.jiroveci:228

C5DKY5              	100.00%		L0PAA5              	100.00%
Bootstrap support for C5DKY5 as seed ortholog is 97%.
Bootstrap support for L0PAA5 as seed ortholog is 100%.

Group of orthologs #825. Best score 228 bits
Score difference with first non-orthologous sequence - L.thermotolerans:228 P.jiroveci:228

C5DKJ3              	100.00%		L0PDH8              	100.00%
Bootstrap support for C5DKJ3 as seed ortholog is 100%.
Bootstrap support for L0PDH8 as seed ortholog is 100%.

Group of orthologs #826. Best score 227 bits
Score difference with first non-orthologous sequence - L.thermotolerans:227 P.jiroveci:227

C5DB98              	100.00%		L0PH67              	100.00%
                    	       		L0P9J6              	94.91%
Bootstrap support for C5DB98 as seed ortholog is 100%.
Bootstrap support for L0PH67 as seed ortholog is 100%.

Group of orthologs #827. Best score 227 bits
Score difference with first non-orthologous sequence - L.thermotolerans:227 P.jiroveci:227

C5DFJ9              	100.00%		L0PC80              	100.00%
Bootstrap support for C5DFJ9 as seed ortholog is 100%.
Bootstrap support for L0PC80 as seed ortholog is 100%.

Group of orthologs #828. Best score 227 bits
Score difference with first non-orthologous sequence - L.thermotolerans:227 P.jiroveci:227

C5DK01              	100.00%		L0P7Y4              	100.00%
Bootstrap support for C5DK01 as seed ortholog is 100%.
Bootstrap support for L0P7Y4 as seed ortholog is 100%.

Group of orthologs #829. Best score 226 bits
Score difference with first non-orthologous sequence - L.thermotolerans:226 P.jiroveci:226

C5DKK6              	100.00%		L0P800              	100.00%
Bootstrap support for C5DKK6 as seed ortholog is 100%.
Bootstrap support for L0P800 as seed ortholog is 100%.

Group of orthologs #830. Best score 226 bits
Score difference with first non-orthologous sequence - L.thermotolerans:226 P.jiroveci:226

C5DFM0              	100.00%		L0PFL8              	100.00%
Bootstrap support for C5DFM0 as seed ortholog is 100%.
Bootstrap support for L0PFL8 as seed ortholog is 100%.

Group of orthologs #831. Best score 226 bits
Score difference with first non-orthologous sequence - L.thermotolerans:142 P.jiroveci:226

C5DIX7              	100.00%		L0PDC4              	100.00%
Bootstrap support for C5DIX7 as seed ortholog is 99%.
Bootstrap support for L0PDC4 as seed ortholog is 100%.

Group of orthologs #832. Best score 225 bits
Score difference with first non-orthologous sequence - L.thermotolerans:225 P.jiroveci:225

C5DBL2              	100.00%		L0P7I8              	100.00%
Bootstrap support for C5DBL2 as seed ortholog is 100%.
Bootstrap support for L0P7I8 as seed ortholog is 100%.

Group of orthologs #833. Best score 225 bits
Score difference with first non-orthologous sequence - L.thermotolerans:225 P.jiroveci:225

C5DDX4              	100.00%		L0PCI8              	100.00%
Bootstrap support for C5DDX4 as seed ortholog is 100%.
Bootstrap support for L0PCI8 as seed ortholog is 100%.

Group of orthologs #834. Best score 225 bits
Score difference with first non-orthologous sequence - L.thermotolerans:225 P.jiroveci:225

C5DEG1              	100.00%		L0PF46              	100.00%
Bootstrap support for C5DEG1 as seed ortholog is 100%.
Bootstrap support for L0PF46 as seed ortholog is 100%.

Group of orthologs #835. Best score 225 bits
Score difference with first non-orthologous sequence - L.thermotolerans:225 P.jiroveci:225

C5DHX0              	100.00%		L0PBV6              	100.00%
Bootstrap support for C5DHX0 as seed ortholog is 100%.
Bootstrap support for L0PBV6 as seed ortholog is 100%.

Group of orthologs #836. Best score 225 bits
Score difference with first non-orthologous sequence - L.thermotolerans:225 P.jiroveci:225

C5E217              	100.00%		L0P768              	100.00%
Bootstrap support for C5E217 as seed ortholog is 100%.
Bootstrap support for L0P768 as seed ortholog is 100%.

Group of orthologs #837. Best score 225 bits
Score difference with first non-orthologous sequence - L.thermotolerans:225 P.jiroveci:225

C5E352              	100.00%		L0P6P2              	100.00%
Bootstrap support for C5E352 as seed ortholog is 100%.
Bootstrap support for L0P6P2 as seed ortholog is 100%.

Group of orthologs #838. Best score 225 bits
Score difference with first non-orthologous sequence - L.thermotolerans:167 P.jiroveci:225

C5DH49              	100.00%		L0PG86              	100.00%
Bootstrap support for C5DH49 as seed ortholog is 100%.
Bootstrap support for L0PG86 as seed ortholog is 100%.

Group of orthologs #839. Best score 225 bits
Score difference with first non-orthologous sequence - L.thermotolerans:225 P.jiroveci:225

C5DHZ2              	100.00%		L0PFE1              	100.00%
Bootstrap support for C5DHZ2 as seed ortholog is 100%.
Bootstrap support for L0PFE1 as seed ortholog is 100%.

Group of orthologs #840. Best score 225 bits
Score difference with first non-orthologous sequence - L.thermotolerans:225 P.jiroveci:225

C5E2U9              	100.00%		L0PBS5              	100.00%
Bootstrap support for C5E2U9 as seed ortholog is 100%.
Bootstrap support for L0PBS5 as seed ortholog is 100%.

Group of orthologs #841. Best score 224 bits
Score difference with first non-orthologous sequence - L.thermotolerans:224 P.jiroveci:224

C5DDW3              	100.00%		L0P8K3              	100.00%
Bootstrap support for C5DDW3 as seed ortholog is 100%.
Bootstrap support for L0P8K3 as seed ortholog is 100%.

Group of orthologs #842. Best score 224 bits
Score difference with first non-orthologous sequence - L.thermotolerans:224 P.jiroveci:224

C5DMH7              	100.00%		L0P9Y2              	100.00%
Bootstrap support for C5DMH7 as seed ortholog is 100%.
Bootstrap support for L0P9Y2 as seed ortholog is 100%.

Group of orthologs #843. Best score 223 bits
Score difference with first non-orthologous sequence - L.thermotolerans:223 P.jiroveci:223

C5DJM7              	100.00%		L0PD33              	100.00%
Bootstrap support for C5DJM7 as seed ortholog is 100%.
Bootstrap support for L0PD33 as seed ortholog is 100%.

Group of orthologs #844. Best score 222 bits
Score difference with first non-orthologous sequence - L.thermotolerans:222 P.jiroveci:222

C5DCM6              	100.00%		L0P9M7              	100.00%
Bootstrap support for C5DCM6 as seed ortholog is 100%.
Bootstrap support for L0P9M7 as seed ortholog is 100%.

Group of orthologs #845. Best score 222 bits
Score difference with first non-orthologous sequence - L.thermotolerans:222 P.jiroveci:222

C5DJC1              	100.00%		L0P7D8              	100.00%
Bootstrap support for C5DJC1 as seed ortholog is 100%.
Bootstrap support for L0P7D8 as seed ortholog is 100%.

Group of orthologs #846. Best score 222 bits
Score difference with first non-orthologous sequence - L.thermotolerans:222 P.jiroveci:222

C5DNE4              	100.00%		L0P9H8              	100.00%
Bootstrap support for C5DNE4 as seed ortholog is 100%.
Bootstrap support for L0P9H8 as seed ortholog is 100%.

Group of orthologs #847. Best score 222 bits
Score difference with first non-orthologous sequence - L.thermotolerans:118 P.jiroveci:131

C5DN33              	100.00%		L0PAM8              	100.00%
Bootstrap support for C5DN33 as seed ortholog is 99%.
Bootstrap support for L0PAM8 as seed ortholog is 99%.

Group of orthologs #848. Best score 222 bits
Score difference with first non-orthologous sequence - L.thermotolerans:222 P.jiroveci:222

C5DM07              	100.00%		L0PCP9              	100.00%
Bootstrap support for C5DM07 as seed ortholog is 100%.
Bootstrap support for L0PCP9 as seed ortholog is 100%.

Group of orthologs #849. Best score 221 bits
Score difference with first non-orthologous sequence - L.thermotolerans:221 P.jiroveci:221

C5DHU4              	100.00%		L0PDR0              	100.00%
Bootstrap support for C5DHU4 as seed ortholog is 100%.
Bootstrap support for L0PDR0 as seed ortholog is 100%.

Group of orthologs #850. Best score 221 bits
Score difference with first non-orthologous sequence - L.thermotolerans:221 P.jiroveci:221

C5DKN4              	100.00%		L0PBE8              	100.00%
Bootstrap support for C5DKN4 as seed ortholog is 100%.
Bootstrap support for L0PBE8 as seed ortholog is 100%.

Group of orthologs #851. Best score 220 bits
Score difference with first non-orthologous sequence - L.thermotolerans:220 P.jiroveci:220

C5DER0              	100.00%		L0PGM7              	100.00%
                    	       		L0PGY6              	93.05%
Bootstrap support for C5DER0 as seed ortholog is 100%.
Bootstrap support for L0PGM7 as seed ortholog is 100%.

Group of orthologs #852. Best score 220 bits
Score difference with first non-orthologous sequence - L.thermotolerans:220 P.jiroveci:220

C5DDW7              	100.00%		L0PBC7              	100.00%
Bootstrap support for C5DDW7 as seed ortholog is 100%.
Bootstrap support for L0PBC7 as seed ortholog is 100%.

Group of orthologs #853. Best score 220 bits
Score difference with first non-orthologous sequence - L.thermotolerans:220 P.jiroveci:220

C5DH28              	100.00%		L0PB48              	100.00%
Bootstrap support for C5DH28 as seed ortholog is 100%.
Bootstrap support for L0PB48 as seed ortholog is 100%.

Group of orthologs #854. Best score 220 bits
Score difference with first non-orthologous sequence - L.thermotolerans:220 P.jiroveci:220

C5DIC6              	100.00%		L0PAE9              	100.00%
Bootstrap support for C5DIC6 as seed ortholog is 100%.
Bootstrap support for L0PAE9 as seed ortholog is 100%.

Group of orthologs #855. Best score 220 bits
Score difference with first non-orthologous sequence - L.thermotolerans:220 P.jiroveci:220

C5DED3              	100.00%		L0PF65              	100.00%
Bootstrap support for C5DED3 as seed ortholog is 100%.
Bootstrap support for L0PF65 as seed ortholog is 100%.

Group of orthologs #856. Best score 219 bits
Score difference with first non-orthologous sequence - L.thermotolerans:219 P.jiroveci:177

C5DK96              	100.00%		L0PFP6              	100.00%
Bootstrap support for C5DK96 as seed ortholog is 100%.
Bootstrap support for L0PFP6 as seed ortholog is 100%.

Group of orthologs #857. Best score 219 bits
Score difference with first non-orthologous sequence - L.thermotolerans:219 P.jiroveci:219

C5E2Z0              	100.00%		L0PB49              	100.00%
Bootstrap support for C5E2Z0 as seed ortholog is 100%.
Bootstrap support for L0PB49 as seed ortholog is 100%.

Group of orthologs #858. Best score 218 bits
Score difference with first non-orthologous sequence - L.thermotolerans:218 P.jiroveci:218

C5DNF4              	100.00%		L0PAY4              	100.00%
C5DI72              	70.00%		
Bootstrap support for C5DNF4 as seed ortholog is 100%.
Bootstrap support for L0PAY4 as seed ortholog is 100%.

Group of orthologs #859. Best score 217 bits
Score difference with first non-orthologous sequence - L.thermotolerans:217 P.jiroveci:217

C5DE94              	100.00%		L0PBP9              	100.00%
Bootstrap support for C5DE94 as seed ortholog is 100%.
Bootstrap support for L0PBP9 as seed ortholog is 100%.

Group of orthologs #860. Best score 217 bits
Score difference with first non-orthologous sequence - L.thermotolerans:217 P.jiroveci:217

C5DFA2              	100.00%		L0PB66              	100.00%
Bootstrap support for C5DFA2 as seed ortholog is 100%.
Bootstrap support for L0PB66 as seed ortholog is 100%.

Group of orthologs #861. Best score 217 bits
Score difference with first non-orthologous sequence - L.thermotolerans:217 P.jiroveci:217

C5DBV6              	100.00%		L0PHI0              	100.00%
Bootstrap support for C5DBV6 as seed ortholog is 100%.
Bootstrap support for L0PHI0 as seed ortholog is 100%.

Group of orthologs #862. Best score 217 bits
Score difference with first non-orthologous sequence - L.thermotolerans:113 P.jiroveci:217

C5E2S7              	100.00%		L0PCQ6              	100.00%
Bootstrap support for C5E2S7 as seed ortholog is 99%.
Bootstrap support for L0PCQ6 as seed ortholog is 100%.

Group of orthologs #863. Best score 217 bits
Score difference with first non-orthologous sequence - L.thermotolerans:217 P.jiroveci:217

C5DMZ7              	100.00%		L0PFP7              	100.00%
Bootstrap support for C5DMZ7 as seed ortholog is 100%.
Bootstrap support for L0PFP7 as seed ortholog is 100%.

Group of orthologs #864. Best score 216 bits
Score difference with first non-orthologous sequence - L.thermotolerans:216 P.jiroveci:216

C5DNH2              	100.00%		L0P864              	100.00%
Bootstrap support for C5DNH2 as seed ortholog is 100%.
Bootstrap support for L0P864 as seed ortholog is 100%.

Group of orthologs #865. Best score 216 bits
Score difference with first non-orthologous sequence - L.thermotolerans:216 P.jiroveci:216

C5DLU5              	100.00%		L0PBZ6              	100.00%
Bootstrap support for C5DLU5 as seed ortholog is 100%.
Bootstrap support for L0PBZ6 as seed ortholog is 100%.

Group of orthologs #866. Best score 216 bits
Score difference with first non-orthologous sequence - L.thermotolerans:216 P.jiroveci:216

C5DLZ2              	100.00%		L0PE58              	100.00%
Bootstrap support for C5DLZ2 as seed ortholog is 100%.
Bootstrap support for L0PE58 as seed ortholog is 100%.

Group of orthologs #867. Best score 215 bits
Score difference with first non-orthologous sequence - L.thermotolerans:118 P.jiroveci:129

C5DFE0              	100.00%		L0P9F9              	100.00%
Bootstrap support for C5DFE0 as seed ortholog is 100%.
Bootstrap support for L0P9F9 as seed ortholog is 100%.

Group of orthologs #868. Best score 215 bits
Score difference with first non-orthologous sequence - L.thermotolerans:215 P.jiroveci:215

C5DDH0              	100.00%		L0PDT4              	100.00%
Bootstrap support for C5DDH0 as seed ortholog is 100%.
Bootstrap support for L0PDT4 as seed ortholog is 100%.

Group of orthologs #869. Best score 215 bits
Score difference with first non-orthologous sequence - L.thermotolerans:13 P.jiroveci:215

C5DG28              	100.00%		L0PED2              	100.00%
Bootstrap support for C5DG28 as seed ortholog is 62%.
Alternative seed ortholog is C5DIF5 (13 bits away from this cluster)
Bootstrap support for L0PED2 as seed ortholog is 100%.

Group of orthologs #870. Best score 215 bits
Score difference with first non-orthologous sequence - L.thermotolerans:215 P.jiroveci:215

C5DL06              	100.00%		L0PDA1              	100.00%
Bootstrap support for C5DL06 as seed ortholog is 100%.
Bootstrap support for L0PDA1 as seed ortholog is 100%.

Group of orthologs #871. Best score 215 bits
Score difference with first non-orthologous sequence - L.thermotolerans:85 P.jiroveci:175

C5DMD3              	100.00%		L0PC81              	100.00%
Bootstrap support for C5DMD3 as seed ortholog is 97%.
Bootstrap support for L0PC81 as seed ortholog is 100%.

Group of orthologs #872. Best score 214 bits
Score difference with first non-orthologous sequence - L.thermotolerans:214 P.jiroveci:214

C5DFB6              	100.00%		L0PC89              	100.00%
Bootstrap support for C5DFB6 as seed ortholog is 100%.
Bootstrap support for L0PC89 as seed ortholog is 100%.

Group of orthologs #873. Best score 214 bits
Score difference with first non-orthologous sequence - L.thermotolerans:214 P.jiroveci:214

C5DNJ9              	100.00%		L0PFH9              	100.00%
Bootstrap support for C5DNJ9 as seed ortholog is 100%.
Bootstrap support for L0PFH9 as seed ortholog is 100%.

Group of orthologs #874. Best score 213 bits
Score difference with first non-orthologous sequence - L.thermotolerans:213 P.jiroveci:213

C5DC13              	100.00%		L0P9N2              	100.00%
Bootstrap support for C5DC13 as seed ortholog is 100%.
Bootstrap support for L0P9N2 as seed ortholog is 100%.

Group of orthologs #875. Best score 213 bits
Score difference with first non-orthologous sequence - L.thermotolerans:213 P.jiroveci:213

C5DHZ3              	100.00%		L0PA86              	100.00%
Bootstrap support for C5DHZ3 as seed ortholog is 100%.
Bootstrap support for L0PA86 as seed ortholog is 100%.

Group of orthologs #876. Best score 212 bits
Score difference with first non-orthologous sequence - L.thermotolerans:212 P.jiroveci:212

C5DH71              	100.00%		L0PGD7              	100.00%
                    	       		L0PGQ0              	65.47%
Bootstrap support for C5DH71 as seed ortholog is 100%.
Bootstrap support for L0PGD7 as seed ortholog is 100%.

Group of orthologs #877. Best score 212 bits
Score difference with first non-orthologous sequence - L.thermotolerans:212 P.jiroveci:212

C5DEB4              	100.00%		L0P9I0              	100.00%
Bootstrap support for C5DEB4 as seed ortholog is 100%.
Bootstrap support for L0P9I0 as seed ortholog is 100%.

Group of orthologs #878. Best score 212 bits
Score difference with first non-orthologous sequence - L.thermotolerans:212 P.jiroveci:212

C5DF21              	100.00%		L0P914              	100.00%
Bootstrap support for C5DF21 as seed ortholog is 100%.
Bootstrap support for L0P914 as seed ortholog is 100%.

Group of orthologs #879. Best score 212 bits
Score difference with first non-orthologous sequence - L.thermotolerans:68 P.jiroveci:142

C5DG04              	100.00%		L0PDN2              	100.00%
Bootstrap support for C5DG04 as seed ortholog is 91%.
Bootstrap support for L0PDN2 as seed ortholog is 99%.

Group of orthologs #880. Best score 212 bits
Score difference with first non-orthologous sequence - L.thermotolerans:212 P.jiroveci:212

C5DGK6              	100.00%		L0PFQ6              	100.00%
Bootstrap support for C5DGK6 as seed ortholog is 100%.
Bootstrap support for L0PFQ6 as seed ortholog is 100%.

Group of orthologs #881. Best score 212 bits
Score difference with first non-orthologous sequence - L.thermotolerans:212 P.jiroveci:137

C5DM78              	100.00%		L0PEH9              	100.00%
Bootstrap support for C5DM78 as seed ortholog is 100%.
Bootstrap support for L0PEH9 as seed ortholog is 99%.

Group of orthologs #882. Best score 211 bits
Score difference with first non-orthologous sequence - L.thermotolerans:211 P.jiroveci:211

C5DET7              	100.00%		L0P910              	100.00%
Bootstrap support for C5DET7 as seed ortholog is 100%.
Bootstrap support for L0P910 as seed ortholog is 100%.

Group of orthologs #883. Best score 211 bits
Score difference with first non-orthologous sequence - L.thermotolerans:211 P.jiroveci:211

C5DGL5              	100.00%		L0PA51              	100.00%
Bootstrap support for C5DGL5 as seed ortholog is 100%.
Bootstrap support for L0PA51 as seed ortholog is 100%.

Group of orthologs #884. Best score 211 bits
Score difference with first non-orthologous sequence - L.thermotolerans:211 P.jiroveci:211

C5E290              	100.00%		L0P8F0              	100.00%
Bootstrap support for C5E290 as seed ortholog is 100%.
Bootstrap support for L0P8F0 as seed ortholog is 100%.

Group of orthologs #885. Best score 210 bits
Score difference with first non-orthologous sequence - L.thermotolerans:210 P.jiroveci:210

C5DDM1              	100.00%		L0P9N5              	100.00%
Bootstrap support for C5DDM1 as seed ortholog is 100%.
Bootstrap support for L0P9N5 as seed ortholog is 100%.

Group of orthologs #886. Best score 210 bits
Score difference with first non-orthologous sequence - L.thermotolerans:210 P.jiroveci:210

C5DBC2              	100.00%		L0PDI2              	100.00%
Bootstrap support for C5DBC2 as seed ortholog is 100%.
Bootstrap support for L0PDI2 as seed ortholog is 100%.

Group of orthologs #887. Best score 210 bits
Score difference with first non-orthologous sequence - L.thermotolerans:210 P.jiroveci:210

C5DGU7              	100.00%		L0P9X0              	100.00%
Bootstrap support for C5DGU7 as seed ortholog is 100%.
Bootstrap support for L0P9X0 as seed ortholog is 100%.

Group of orthologs #888. Best score 210 bits
Score difference with first non-orthologous sequence - L.thermotolerans:210 P.jiroveci:118

C5DMC4              	100.00%		L0P919              	100.00%
Bootstrap support for C5DMC4 as seed ortholog is 100%.
Bootstrap support for L0P919 as seed ortholog is 100%.

Group of orthologs #889. Best score 210 bits
Score difference with first non-orthologous sequence - L.thermotolerans:210 P.jiroveci:210

C5DLV8              	100.00%		L0P9U1              	100.00%
Bootstrap support for C5DLV8 as seed ortholog is 100%.
Bootstrap support for L0P9U1 as seed ortholog is 100%.

Group of orthologs #890. Best score 210 bits
Score difference with first non-orthologous sequence - L.thermotolerans:210 P.jiroveci:210

C5DKF7              	100.00%		L0PGY0              	100.00%
Bootstrap support for C5DKF7 as seed ortholog is 100%.
Bootstrap support for L0PGY0 as seed ortholog is 100%.

Group of orthologs #891. Best score 209 bits
Score difference with first non-orthologous sequence - L.thermotolerans:209 P.jiroveci:209

C5DMU0              	100.00%		L0PCM9              	100.00%
Bootstrap support for C5DMU0 as seed ortholog is 100%.
Bootstrap support for L0PCM9 as seed ortholog is 100%.

Group of orthologs #892. Best score 209 bits
Score difference with first non-orthologous sequence - L.thermotolerans:209 P.jiroveci:209

C5E3P9              	100.00%		L0PAC1              	100.00%
Bootstrap support for C5E3P9 as seed ortholog is 100%.
Bootstrap support for L0PAC1 as seed ortholog is 100%.

Group of orthologs #893. Best score 208 bits
Score difference with first non-orthologous sequence - L.thermotolerans:208 P.jiroveci:208

C5DJV2              	100.00%		L0PFZ6              	100.00%
                    	       		L0P7L2              	95.78%
Bootstrap support for C5DJV2 as seed ortholog is 100%.
Bootstrap support for L0PFZ6 as seed ortholog is 100%.

Group of orthologs #894. Best score 208 bits
Score difference with first non-orthologous sequence - L.thermotolerans:90 P.jiroveci:208

C5DF61              	100.00%		L0PB76              	100.00%
Bootstrap support for C5DF61 as seed ortholog is 97%.
Bootstrap support for L0PB76 as seed ortholog is 100%.

Group of orthologs #895. Best score 208 bits
Score difference with first non-orthologous sequence - L.thermotolerans:208 P.jiroveci:208

C5DMW9              	100.00%		L0P8B8              	100.00%
Bootstrap support for C5DMW9 as seed ortholog is 100%.
Bootstrap support for L0P8B8 as seed ortholog is 100%.

Group of orthologs #896. Best score 208 bits
Score difference with first non-orthologous sequence - L.thermotolerans:208 P.jiroveci:208

C5DHZ4              	100.00%		L0PEN3              	100.00%
Bootstrap support for C5DHZ4 as seed ortholog is 100%.
Bootstrap support for L0PEN3 as seed ortholog is 100%.

Group of orthologs #897. Best score 208 bits
Score difference with first non-orthologous sequence - L.thermotolerans:208 P.jiroveci:208

C5DKV5              	100.00%		L0PFS7              	100.00%
Bootstrap support for C5DKV5 as seed ortholog is 100%.
Bootstrap support for L0PFS7 as seed ortholog is 100%.

Group of orthologs #898. Best score 208 bits
Score difference with first non-orthologous sequence - L.thermotolerans:208 P.jiroveci:208

C5E3P2              	100.00%		L0PDM3              	100.00%
Bootstrap support for C5E3P2 as seed ortholog is 100%.
Bootstrap support for L0PDM3 as seed ortholog is 100%.

Group of orthologs #899. Best score 207 bits
Score difference with first non-orthologous sequence - L.thermotolerans:207 P.jiroveci:207

C5DF69              	100.00%		L0PEC1              	100.00%
Bootstrap support for C5DF69 as seed ortholog is 100%.
Bootstrap support for L0PEC1 as seed ortholog is 100%.

Group of orthologs #900. Best score 207 bits
Score difference with first non-orthologous sequence - L.thermotolerans:207 P.jiroveci:207

C5DM18              	100.00%		L0PDX4              	100.00%
Bootstrap support for C5DM18 as seed ortholog is 100%.
Bootstrap support for L0PDX4 as seed ortholog is 100%.

Group of orthologs #901. Best score 206 bits
Score difference with first non-orthologous sequence - L.thermotolerans:206 P.jiroveci:206

C5DBA4              	100.00%		L0PAY0              	100.00%
Bootstrap support for C5DBA4 as seed ortholog is 100%.
Bootstrap support for L0PAY0 as seed ortholog is 100%.

Group of orthologs #902. Best score 206 bits
Score difference with first non-orthologous sequence - L.thermotolerans:206 P.jiroveci:206

C5DEC6              	100.00%		L0P984              	100.00%
Bootstrap support for C5DEC6 as seed ortholog is 100%.
Bootstrap support for L0P984 as seed ortholog is 100%.

Group of orthologs #903. Best score 205 bits
Score difference with first non-orthologous sequence - L.thermotolerans:205 P.jiroveci:205

C5DBF4              	100.00%		L0PEB9              	100.00%
                    	       		L0PA79              	56.06%
Bootstrap support for C5DBF4 as seed ortholog is 100%.
Bootstrap support for L0PEB9 as seed ortholog is 100%.

Group of orthologs #904. Best score 205 bits
Score difference with first non-orthologous sequence - L.thermotolerans:205 P.jiroveci:205

C5DGU2              	100.00%		L0P9M4              	100.00%
Bootstrap support for C5DGU2 as seed ortholog is 100%.
Bootstrap support for L0P9M4 as seed ortholog is 100%.

Group of orthologs #905. Best score 205 bits
Score difference with first non-orthologous sequence - L.thermotolerans:205 P.jiroveci:205

C5E3N5              	100.00%		L0P701              	100.00%
Bootstrap support for C5E3N5 as seed ortholog is 100%.
Bootstrap support for L0P701 as seed ortholog is 100%.

Group of orthologs #906. Best score 205 bits
Score difference with first non-orthologous sequence - L.thermotolerans:99 P.jiroveci:205

C5DIJ4              	100.00%		L0PGR5              	100.00%
Bootstrap support for C5DIJ4 as seed ortholog is 99%.
Bootstrap support for L0PGR5 as seed ortholog is 100%.

Group of orthologs #907. Best score 205 bits
Score difference with first non-orthologous sequence - L.thermotolerans:143 P.jiroveci:151

C5E358              	100.00%		L0PCS6              	100.00%
Bootstrap support for C5E358 as seed ortholog is 99%.
Bootstrap support for L0PCS6 as seed ortholog is 99%.

Group of orthologs #908. Best score 204 bits
Score difference with first non-orthologous sequence - L.thermotolerans:204 P.jiroveci:204

C5DEC9              	100.00%		L0P8C9              	100.00%
Bootstrap support for C5DEC9 as seed ortholog is 100%.
Bootstrap support for L0P8C9 as seed ortholog is 100%.

Group of orthologs #909. Best score 204 bits
Score difference with first non-orthologous sequence - L.thermotolerans:204 P.jiroveci:204

C5DJB9              	100.00%		L0P9Q6              	100.00%
Bootstrap support for C5DJB9 as seed ortholog is 100%.
Bootstrap support for L0P9Q6 as seed ortholog is 100%.

Group of orthologs #910. Best score 203 bits
Score difference with first non-orthologous sequence - L.thermotolerans:203 P.jiroveci:203

C5DHS9              	100.00%		L0PH55              	100.00%
Bootstrap support for C5DHS9 as seed ortholog is 100%.
Bootstrap support for L0PH55 as seed ortholog is 100%.

Group of orthologs #911. Best score 203 bits
Score difference with first non-orthologous sequence - L.thermotolerans:203 P.jiroveci:203

C5DME8              	100.00%		L0PHG2              	100.00%
Bootstrap support for C5DME8 as seed ortholog is 100%.
Bootstrap support for L0PHG2 as seed ortholog is 100%.

Group of orthologs #912. Best score 202 bits
Score difference with first non-orthologous sequence - L.thermotolerans:81 P.jiroveci:202

C5DMB3              	100.00%		L0PBK7              	100.00%
                    	       		L0P8A5              	98.42%
Bootstrap support for C5DMB3 as seed ortholog is 99%.
Bootstrap support for L0PBK7 as seed ortholog is 100%.

Group of orthologs #913. Best score 202 bits
Score difference with first non-orthologous sequence - L.thermotolerans:156 P.jiroveci:148

C5DCB7              	100.00%		L0P9T6              	100.00%
Bootstrap support for C5DCB7 as seed ortholog is 100%.
Bootstrap support for L0P9T6 as seed ortholog is 100%.

Group of orthologs #914. Best score 201 bits
Score difference with first non-orthologous sequence - L.thermotolerans:201 P.jiroveci:201

C5DGG3              	100.00%		L0P9I6              	100.00%
Bootstrap support for C5DGG3 as seed ortholog is 100%.
Bootstrap support for L0P9I6 as seed ortholog is 100%.

Group of orthologs #915. Best score 201 bits
Score difference with first non-orthologous sequence - L.thermotolerans:201 P.jiroveci:201

C5DH80              	100.00%		L0PA60              	100.00%
Bootstrap support for C5DH80 as seed ortholog is 100%.
Bootstrap support for L0PA60 as seed ortholog is 100%.

Group of orthologs #916. Best score 201 bits
Score difference with first non-orthologous sequence - L.thermotolerans:201 P.jiroveci:201

C5DCJ1              	100.00%		L0PF44              	100.00%
Bootstrap support for C5DCJ1 as seed ortholog is 100%.
Bootstrap support for L0PF44 as seed ortholog is 100%.

Group of orthologs #917. Best score 201 bits
Score difference with first non-orthologous sequence - L.thermotolerans:201 P.jiroveci:201

C5DGK4              	100.00%		L0PG84              	100.00%
Bootstrap support for C5DGK4 as seed ortholog is 100%.
Bootstrap support for L0PG84 as seed ortholog is 100%.

Group of orthologs #918. Best score 201 bits
Score difference with first non-orthologous sequence - L.thermotolerans:201 P.jiroveci:201

C5DIC4              	100.00%		L0PGA4              	100.00%
Bootstrap support for C5DIC4 as seed ortholog is 100%.
Bootstrap support for L0PGA4 as seed ortholog is 100%.

Group of orthologs #919. Best score 201 bits
Score difference with first non-orthologous sequence - L.thermotolerans:201 P.jiroveci:201

C5E2K3              	100.00%		L0PB81              	100.00%
Bootstrap support for C5E2K3 as seed ortholog is 100%.
Bootstrap support for L0PB81 as seed ortholog is 100%.

Group of orthologs #920. Best score 200 bits
Score difference with first non-orthologous sequence - L.thermotolerans:200 P.jiroveci:138

C5DGD7              	100.00%		L0PFY7              	100.00%
Bootstrap support for C5DGD7 as seed ortholog is 100%.
Bootstrap support for L0PFY7 as seed ortholog is 99%.

Group of orthologs #921. Best score 200 bits
Score difference with first non-orthologous sequence - L.thermotolerans:89 P.jiroveci:91

C5E2P9              	100.00%		L0P7B1              	100.00%
Bootstrap support for C5E2P9 as seed ortholog is 99%.
Bootstrap support for L0P7B1 as seed ortholog is 99%.

Group of orthologs #922. Best score 199 bits
Score difference with first non-orthologous sequence - L.thermotolerans:199 P.jiroveci:199

C5DJK4              	100.00%		L0PGQ8              	100.00%
C5DHV5              	22.09%		
Bootstrap support for C5DJK4 as seed ortholog is 100%.
Bootstrap support for L0PGQ8 as seed ortholog is 100%.

Group of orthologs #923. Best score 199 bits
Score difference with first non-orthologous sequence - L.thermotolerans:199 P.jiroveci:199

C5DDF7              	100.00%		L0PEC2              	100.00%
Bootstrap support for C5DDF7 as seed ortholog is 100%.
Bootstrap support for L0PEC2 as seed ortholog is 100%.

Group of orthologs #924. Best score 199 bits
Score difference with first non-orthologous sequence - L.thermotolerans:199 P.jiroveci:199

C5DKU6              	100.00%		L0P9D1              	100.00%
Bootstrap support for C5DKU6 as seed ortholog is 100%.
Bootstrap support for L0P9D1 as seed ortholog is 100%.

Group of orthologs #925. Best score 199 bits
Score difference with first non-orthologous sequence - L.thermotolerans:83 P.jiroveci:113

C5DN58              	100.00%		L0PAS2              	100.00%
Bootstrap support for C5DN58 as seed ortholog is 99%.
Bootstrap support for L0PAS2 as seed ortholog is 100%.

Group of orthologs #926. Best score 199 bits
Score difference with first non-orthologous sequence - L.thermotolerans:199 P.jiroveci:199

C5DNJ5              	100.00%		L0PGC9              	100.00%
Bootstrap support for C5DNJ5 as seed ortholog is 100%.
Bootstrap support for L0PGC9 as seed ortholog is 100%.

Group of orthologs #927. Best score 198 bits
Score difference with first non-orthologous sequence - L.thermotolerans:198 P.jiroveci:198

C5DJV1              	100.00%		L0P9D3              	100.00%
                    	       		L0P7B2              	57.21%
Bootstrap support for C5DJV1 as seed ortholog is 100%.
Bootstrap support for L0P9D3 as seed ortholog is 100%.

Group of orthologs #928. Best score 198 bits
Score difference with first non-orthologous sequence - L.thermotolerans:198 P.jiroveci:198

C5DFL6              	100.00%		L0PA36              	100.00%
Bootstrap support for C5DFL6 as seed ortholog is 100%.
Bootstrap support for L0PA36 as seed ortholog is 100%.

Group of orthologs #929. Best score 198 bits
Score difference with first non-orthologous sequence - L.thermotolerans:198 P.jiroveci:198

C5DEJ3              	100.00%		L0PBV3              	100.00%
Bootstrap support for C5DEJ3 as seed ortholog is 100%.
Bootstrap support for L0PBV3 as seed ortholog is 100%.

Group of orthologs #930. Best score 198 bits
Score difference with first non-orthologous sequence - L.thermotolerans:198 P.jiroveci:198

C5DDV7              	100.00%		L0PHP6              	100.00%
Bootstrap support for C5DDV7 as seed ortholog is 100%.
Bootstrap support for L0PHP6 as seed ortholog is 100%.

Group of orthologs #931. Best score 198 bits
Score difference with first non-orthologous sequence - L.thermotolerans:198 P.jiroveci:198

C5DLQ7              	100.00%		L0PIQ9              	100.00%
Bootstrap support for C5DLQ7 as seed ortholog is 100%.
Bootstrap support for L0PIQ9 as seed ortholog is 100%.

Group of orthologs #932. Best score 197 bits
Score difference with first non-orthologous sequence - L.thermotolerans:197 P.jiroveci:197

C5DCG8              	100.00%		L0PAM3              	100.00%
Bootstrap support for C5DCG8 as seed ortholog is 100%.
Bootstrap support for L0PAM3 as seed ortholog is 100%.

Group of orthologs #933. Best score 197 bits
Score difference with first non-orthologous sequence - L.thermotolerans:197 P.jiroveci:197

C5DMT2              	100.00%		L0PBQ0              	100.00%
Bootstrap support for C5DMT2 as seed ortholog is 100%.
Bootstrap support for L0PBQ0 as seed ortholog is 100%.

Group of orthologs #934. Best score 197 bits
Score difference with first non-orthologous sequence - L.thermotolerans:197 P.jiroveci:197

C5DN89              	100.00%		L0PCE0              	100.00%
Bootstrap support for C5DN89 as seed ortholog is 100%.
Bootstrap support for L0PCE0 as seed ortholog is 100%.

Group of orthologs #935. Best score 197 bits
Score difference with first non-orthologous sequence - L.thermotolerans:197 P.jiroveci:148

C5DML5              	100.00%		L0PDD3              	100.00%
Bootstrap support for C5DML5 as seed ortholog is 100%.
Bootstrap support for L0PDD3 as seed ortholog is 100%.

Group of orthologs #936. Best score 196 bits
Score difference with first non-orthologous sequence - L.thermotolerans:107 P.jiroveci:196

C5DD67              	100.00%		L0PAF0              	100.00%
Bootstrap support for C5DD67 as seed ortholog is 99%.
Bootstrap support for L0PAF0 as seed ortholog is 100%.

Group of orthologs #937. Best score 196 bits
Score difference with first non-orthologous sequence - L.thermotolerans:148 P.jiroveci:119

C5DIY3              	100.00%		L0PAQ4              	100.00%
Bootstrap support for C5DIY3 as seed ortholog is 99%.
Bootstrap support for L0PAQ4 as seed ortholog is 99%.

Group of orthologs #938. Best score 196 bits
Score difference with first non-orthologous sequence - L.thermotolerans:196 P.jiroveci:196

C5DJK5              	100.00%		L0PBN7              	100.00%
Bootstrap support for C5DJK5 as seed ortholog is 100%.
Bootstrap support for L0PBN7 as seed ortholog is 100%.

Group of orthologs #939. Best score 195 bits
Score difference with first non-orthologous sequence - L.thermotolerans:132 P.jiroveci:195

C5DDF2              	100.00%		L0P7E9              	100.00%
Bootstrap support for C5DDF2 as seed ortholog is 100%.
Bootstrap support for L0P7E9 as seed ortholog is 100%.

Group of orthologs #940. Best score 195 bits
Score difference with first non-orthologous sequence - L.thermotolerans:195 P.jiroveci:195

C5DG56              	100.00%		L0P8J0              	100.00%
Bootstrap support for C5DG56 as seed ortholog is 100%.
Bootstrap support for L0P8J0 as seed ortholog is 100%.

Group of orthologs #941. Best score 195 bits
Score difference with first non-orthologous sequence - L.thermotolerans:195 P.jiroveci:195

C5DD58              	100.00%		L0PCT5              	100.00%
Bootstrap support for C5DD58 as seed ortholog is 100%.
Bootstrap support for L0PCT5 as seed ortholog is 100%.

Group of orthologs #942. Best score 195 bits
Score difference with first non-orthologous sequence - L.thermotolerans:195 P.jiroveci:195

C5DLR8              	100.00%		L0P7Z9              	100.00%
Bootstrap support for C5DLR8 as seed ortholog is 100%.
Bootstrap support for L0P7Z9 as seed ortholog is 100%.

Group of orthologs #943. Best score 195 bits
Score difference with first non-orthologous sequence - L.thermotolerans:195 P.jiroveci:195

C5DLB6              	100.00%		L0PE77              	100.00%
Bootstrap support for C5DLB6 as seed ortholog is 100%.
Bootstrap support for L0PE77 as seed ortholog is 100%.

Group of orthologs #944. Best score 195 bits
Score difference with first non-orthologous sequence - L.thermotolerans:195 P.jiroveci:195

C5DNM5              	100.00%		L0PCF0              	100.00%
Bootstrap support for C5DNM5 as seed ortholog is 100%.
Bootstrap support for L0PCF0 as seed ortholog is 100%.

Group of orthologs #945. Best score 195 bits
Score difference with first non-orthologous sequence - L.thermotolerans:195 P.jiroveci:195

C5DNF0              	100.00%		L0PE37              	100.00%
Bootstrap support for C5DNF0 as seed ortholog is 100%.
Bootstrap support for L0PE37 as seed ortholog is 100%.

Group of orthologs #946. Best score 195 bits
Score difference with first non-orthologous sequence - L.thermotolerans:195 P.jiroveci:195

C5DN77              	100.00%		L0PFL0              	100.00%
Bootstrap support for C5DN77 as seed ortholog is 100%.
Bootstrap support for L0PFL0 as seed ortholog is 100%.

Group of orthologs #947. Best score 194 bits
Score difference with first non-orthologous sequence - L.thermotolerans:194 P.jiroveci:194

C5DJJ4              	100.00%		L0P838              	100.00%
Bootstrap support for C5DJJ4 as seed ortholog is 100%.
Bootstrap support for L0P838 as seed ortholog is 100%.

Group of orthologs #948. Best score 194 bits
Score difference with first non-orthologous sequence - L.thermotolerans:194 P.jiroveci:194

C5DFG0              	100.00%		L0PFZ7              	100.00%
Bootstrap support for C5DFG0 as seed ortholog is 100%.
Bootstrap support for L0PFZ7 as seed ortholog is 100%.

Group of orthologs #949. Best score 194 bits
Score difference with first non-orthologous sequence - L.thermotolerans:194 P.jiroveci:194

C5DJL2              	100.00%		L0PC68              	100.00%
Bootstrap support for C5DJL2 as seed ortholog is 100%.
Bootstrap support for L0PC68 as seed ortholog is 100%.

Group of orthologs #950. Best score 194 bits
Score difference with first non-orthologous sequence - L.thermotolerans:194 P.jiroveci:194

C5E2J9              	100.00%		L0PF58              	100.00%
Bootstrap support for C5E2J9 as seed ortholog is 100%.
Bootstrap support for L0PF58 as seed ortholog is 100%.

Group of orthologs #951. Best score 193 bits
Score difference with first non-orthologous sequence - L.thermotolerans:193 P.jiroveci:193

C5DBM1              	100.00%		L0P907              	100.00%
                    	       		L0PER8              	81.91%
Bootstrap support for C5DBM1 as seed ortholog is 100%.
Bootstrap support for L0P907 as seed ortholog is 100%.

Group of orthologs #952. Best score 193 bits
Score difference with first non-orthologous sequence - L.thermotolerans:193 P.jiroveci:193

C5DMJ4              	100.00%		L0P872              	100.00%
Bootstrap support for C5DMJ4 as seed ortholog is 100%.
Bootstrap support for L0P872 as seed ortholog is 100%.

Group of orthologs #953. Best score 192 bits
Score difference with first non-orthologous sequence - L.thermotolerans:192 P.jiroveci:192

C5DGK8              	100.00%		L0PE36              	100.00%
Bootstrap support for C5DGK8 as seed ortholog is 100%.
Bootstrap support for L0PE36 as seed ortholog is 100%.

Group of orthologs #954. Best score 191 bits
Score difference with first non-orthologous sequence - L.thermotolerans:191 P.jiroveci:191

C5DIQ6              	100.00%		L0PC18              	100.00%
Bootstrap support for C5DIQ6 as seed ortholog is 100%.
Bootstrap support for L0PC18 as seed ortholog is 100%.

Group of orthologs #955. Best score 191 bits
Score difference with first non-orthologous sequence - L.thermotolerans:191 P.jiroveci:191

C5E2X5              	100.00%		L0P7R4              	100.00%
Bootstrap support for C5E2X5 as seed ortholog is 100%.
Bootstrap support for L0P7R4 as seed ortholog is 100%.

Group of orthologs #956. Best score 191 bits
Score difference with first non-orthologous sequence - L.thermotolerans:191 P.jiroveci:191

C5DMS8              	100.00%		L0PGI1              	100.00%
Bootstrap support for C5DMS8 as seed ortholog is 100%.
Bootstrap support for L0PGI1 as seed ortholog is 100%.

Group of orthologs #957. Best score 190 bits
Score difference with first non-orthologous sequence - L.thermotolerans:190 P.jiroveci:190

C5E366              	100.00%		L0P6S2              	100.00%
C5DFD4              	6.08%		
Bootstrap support for C5E366 as seed ortholog is 100%.
Bootstrap support for L0P6S2 as seed ortholog is 100%.

Group of orthologs #958. Best score 190 bits
Score difference with first non-orthologous sequence - L.thermotolerans:190 P.jiroveci:190

C5DCK4              	100.00%		L0PAZ5              	100.00%
Bootstrap support for C5DCK4 as seed ortholog is 100%.
Bootstrap support for L0PAZ5 as seed ortholog is 100%.

Group of orthologs #959. Best score 190 bits
Score difference with first non-orthologous sequence - L.thermotolerans:92 P.jiroveci:190

C5DBM6              	100.00%		L0PDD0              	100.00%
Bootstrap support for C5DBM6 as seed ortholog is 99%.
Bootstrap support for L0PDD0 as seed ortholog is 100%.

Group of orthologs #960. Best score 190 bits
Score difference with first non-orthologous sequence - L.thermotolerans:190 P.jiroveci:190

C5DG62              	100.00%		L0PAE8              	100.00%
Bootstrap support for C5DG62 as seed ortholog is 100%.
Bootstrap support for L0PAE8 as seed ortholog is 100%.

Group of orthologs #961. Best score 190 bits
Score difference with first non-orthologous sequence - L.thermotolerans:190 P.jiroveci:190

C5DIR8              	100.00%		L0P8Y0              	100.00%
Bootstrap support for C5DIR8 as seed ortholog is 100%.
Bootstrap support for L0P8Y0 as seed ortholog is 100%.

Group of orthologs #962. Best score 190 bits
Score difference with first non-orthologous sequence - L.thermotolerans:124 P.jiroveci:190

C5DGY6              	100.00%		L0PFE9              	100.00%
Bootstrap support for C5DGY6 as seed ortholog is 99%.
Bootstrap support for L0PFE9 as seed ortholog is 100%.

Group of orthologs #963. Best score 190 bits
Score difference with first non-orthologous sequence - L.thermotolerans:190 P.jiroveci:190

C5DG74              	100.00%		L0PGJ6              	100.00%
Bootstrap support for C5DG74 as seed ortholog is 100%.
Bootstrap support for L0PGJ6 as seed ortholog is 100%.

Group of orthologs #964. Best score 190 bits
Score difference with first non-orthologous sequence - L.thermotolerans:190 P.jiroveci:190

C5DNA9              	100.00%		L0PAG4              	100.00%
Bootstrap support for C5DNA9 as seed ortholog is 100%.
Bootstrap support for L0PAG4 as seed ortholog is 100%.

Group of orthologs #965. Best score 190 bits
Score difference with first non-orthologous sequence - L.thermotolerans:190 P.jiroveci:190

C5DIU1              	100.00%		L0PFC3              	100.00%
Bootstrap support for C5DIU1 as seed ortholog is 100%.
Bootstrap support for L0PFC3 as seed ortholog is 100%.

Group of orthologs #966. Best score 190 bits
Score difference with first non-orthologous sequence - L.thermotolerans:63 P.jiroveci:190

C5DL34              	100.00%		L0PDX3              	100.00%
Bootstrap support for C5DL34 as seed ortholog is 91%.
Bootstrap support for L0PDX3 as seed ortholog is 100%.

Group of orthologs #967. Best score 190 bits
Score difference with first non-orthologous sequence - L.thermotolerans:146 P.jiroveci:190

C5E278              	100.00%		L0PD40              	100.00%
Bootstrap support for C5E278 as seed ortholog is 99%.
Bootstrap support for L0PD40 as seed ortholog is 100%.

Group of orthologs #968. Best score 189 bits
Score difference with first non-orthologous sequence - L.thermotolerans:189 P.jiroveci:189

C5DL10              	100.00%		L0PAE6              	100.00%
C5DDE5              	8.56%		
C5DC46              	6.84%		
Bootstrap support for C5DL10 as seed ortholog is 100%.
Bootstrap support for L0PAE6 as seed ortholog is 100%.

Group of orthologs #969. Best score 189 bits
Score difference with first non-orthologous sequence - L.thermotolerans:189 P.jiroveci:189

C5DK70              	100.00%		L0PGN5              	100.00%
                    	       		L0P9Q4              	93.81%
Bootstrap support for C5DK70 as seed ortholog is 100%.
Bootstrap support for L0PGN5 as seed ortholog is 100%.

Group of orthologs #970. Best score 189 bits
Score difference with first non-orthologous sequence - L.thermotolerans:189 P.jiroveci:189

C5DG26              	100.00%		L0PBE9              	100.00%
Bootstrap support for C5DG26 as seed ortholog is 100%.
Bootstrap support for L0PBE9 as seed ortholog is 100%.

Group of orthologs #971. Best score 189 bits
Score difference with first non-orthologous sequence - L.thermotolerans:189 P.jiroveci:189

C5DEW9              	100.00%		L0PD11              	100.00%
Bootstrap support for C5DEW9 as seed ortholog is 100%.
Bootstrap support for L0PD11 as seed ortholog is 100%.

Group of orthologs #972. Best score 189 bits
Score difference with first non-orthologous sequence - L.thermotolerans:189 P.jiroveci:189

C5DBX4              	100.00%		L0PG83              	100.00%
Bootstrap support for C5DBX4 as seed ortholog is 100%.
Bootstrap support for L0PG83 as seed ortholog is 100%.

Group of orthologs #973. Best score 189 bits
Score difference with first non-orthologous sequence - L.thermotolerans:189 P.jiroveci:189

C5DIZ3              	100.00%		L0P9C0              	100.00%
Bootstrap support for C5DIZ3 as seed ortholog is 100%.
Bootstrap support for L0P9C0 as seed ortholog is 100%.

Group of orthologs #974. Best score 188 bits
Score difference with first non-orthologous sequence - L.thermotolerans:188 P.jiroveci:188

C5DCQ9              	100.00%		L0P7U8              	100.00%
                    	       		L0P801              	77.53%
Bootstrap support for C5DCQ9 as seed ortholog is 100%.
Bootstrap support for L0P7U8 as seed ortholog is 100%.

Group of orthologs #975. Best score 188 bits
Score difference with first non-orthologous sequence - L.thermotolerans:188 P.jiroveci:188

C5DCI0              	100.00%		L0PFF0              	100.00%
Bootstrap support for C5DCI0 as seed ortholog is 100%.
Bootstrap support for L0PFF0 as seed ortholog is 100%.

Group of orthologs #976. Best score 188 bits
Score difference with first non-orthologous sequence - L.thermotolerans:188 P.jiroveci:188

C5DJS6              	100.00%		L0PDV9              	100.00%
Bootstrap support for C5DJS6 as seed ortholog is 100%.
Bootstrap support for L0PDV9 as seed ortholog is 100%.

Group of orthologs #977. Best score 188 bits
Score difference with first non-orthologous sequence - L.thermotolerans:188 P.jiroveci:188

C5DJN2              	100.00%		L0PFW3              	100.00%
Bootstrap support for C5DJN2 as seed ortholog is 100%.
Bootstrap support for L0PFW3 as seed ortholog is 100%.

Group of orthologs #978. Best score 187 bits
Score difference with first non-orthologous sequence - L.thermotolerans:187 P.jiroveci:187

C5DF86              	100.00%		L0P816              	100.00%
Bootstrap support for C5DF86 as seed ortholog is 100%.
Bootstrap support for L0P816 as seed ortholog is 100%.

Group of orthologs #979. Best score 187 bits
Score difference with first non-orthologous sequence - L.thermotolerans:187 P.jiroveci:187

C5DE87              	100.00%		L0PFQ3              	100.00%
Bootstrap support for C5DE87 as seed ortholog is 100%.
Bootstrap support for L0PFQ3 as seed ortholog is 100%.

Group of orthologs #980. Best score 187 bits
Score difference with first non-orthologous sequence - L.thermotolerans:187 P.jiroveci:187

C5DGG7              	100.00%		L0PHA7              	100.00%
Bootstrap support for C5DGG7 as seed ortholog is 100%.
Bootstrap support for L0PHA7 as seed ortholog is 100%.

Group of orthologs #981. Best score 187 bits
Score difference with first non-orthologous sequence - L.thermotolerans:187 P.jiroveci:187

C5E2W5              	100.00%		L0PBX9              	100.00%
Bootstrap support for C5E2W5 as seed ortholog is 100%.
Bootstrap support for L0PBX9 as seed ortholog is 100%.

Group of orthologs #982. Best score 186 bits
Score difference with first non-orthologous sequence - L.thermotolerans:186 P.jiroveci:186

C5DEF9              	100.00%		L0PDL8              	100.00%
                    	       		L0PD52              	90.51%
Bootstrap support for C5DEF9 as seed ortholog is 100%.
Bootstrap support for L0PDL8 as seed ortholog is 100%.

Group of orthologs #983. Best score 186 bits
Score difference with first non-orthologous sequence - L.thermotolerans:21 P.jiroveci:186

C5DDL0              	100.00%		L0P6T2              	100.00%
Bootstrap support for C5DDL0 as seed ortholog is 69%.
Alternative seed ortholog is C5DHY5 (21 bits away from this cluster)
Bootstrap support for L0P6T2 as seed ortholog is 100%.

Group of orthologs #984. Best score 186 bits
Score difference with first non-orthologous sequence - L.thermotolerans:134 P.jiroveci:186

C5DFM1              	100.00%		L0P8B3              	100.00%
Bootstrap support for C5DFM1 as seed ortholog is 100%.
Bootstrap support for L0P8B3 as seed ortholog is 100%.

Group of orthologs #985. Best score 186 bits
Score difference with first non-orthologous sequence - L.thermotolerans:67 P.jiroveci:186

C5DC87              	100.00%		L0PCT9              	100.00%
Bootstrap support for C5DC87 as seed ortholog is 93%.
Bootstrap support for L0PCT9 as seed ortholog is 100%.

Group of orthologs #986. Best score 186 bits
Score difference with first non-orthologous sequence - L.thermotolerans:186 P.jiroveci:186

C5DI93              	100.00%		L0PFX6              	100.00%
Bootstrap support for C5DI93 as seed ortholog is 100%.
Bootstrap support for L0PFX6 as seed ortholog is 100%.

Group of orthologs #987. Best score 186 bits
Score difference with first non-orthologous sequence - L.thermotolerans:186 P.jiroveci:186

C5E3E5              	100.00%		L0P9U0              	100.00%
Bootstrap support for C5E3E5 as seed ortholog is 100%.
Bootstrap support for L0P9U0 as seed ortholog is 100%.

Group of orthologs #988. Best score 186 bits
Score difference with first non-orthologous sequence - L.thermotolerans:186 P.jiroveci:186

C5DK22              	100.00%		L0PG24              	100.00%
Bootstrap support for C5DK22 as seed ortholog is 100%.
Bootstrap support for L0PG24 as seed ortholog is 100%.

Group of orthologs #989. Best score 185 bits
Score difference with first non-orthologous sequence - L.thermotolerans:185 P.jiroveci:185

C5DBV5              	100.00%		L0PD78              	100.00%
Bootstrap support for C5DBV5 as seed ortholog is 100%.
Bootstrap support for L0PD78 as seed ortholog is 100%.

Group of orthologs #990. Best score 185 bits
Score difference with first non-orthologous sequence - L.thermotolerans:185 P.jiroveci:185

C5DBC8              	100.00%		L0PFI7              	100.00%
Bootstrap support for C5DBC8 as seed ortholog is 100%.
Bootstrap support for L0PFI7 as seed ortholog is 100%.

Group of orthologs #991. Best score 185 bits
Score difference with first non-orthologous sequence - L.thermotolerans:185 P.jiroveci:185

C5DDH8              	100.00%		L0PGP9              	100.00%
Bootstrap support for C5DDH8 as seed ortholog is 100%.
Bootstrap support for L0PGP9 as seed ortholog is 100%.

Group of orthologs #992. Best score 185 bits
Score difference with first non-orthologous sequence - L.thermotolerans:185 P.jiroveci:185

C5DFI4              	100.00%		L0PHN6              	100.00%
Bootstrap support for C5DFI4 as seed ortholog is 100%.
Bootstrap support for L0PHN6 as seed ortholog is 100%.

Group of orthologs #993. Best score 185 bits
Score difference with first non-orthologous sequence - L.thermotolerans:185 P.jiroveci:185

C5DJ94              	100.00%		L0PFN0              	100.00%
Bootstrap support for C5DJ94 as seed ortholog is 100%.
Bootstrap support for L0PFN0 as seed ortholog is 100%.

Group of orthologs #994. Best score 184 bits
Score difference with first non-orthologous sequence - L.thermotolerans:184 P.jiroveci:184

C5DD47              	100.00%		L0P778              	100.00%
Bootstrap support for C5DD47 as seed ortholog is 100%.
Bootstrap support for L0P778 as seed ortholog is 100%.

Group of orthologs #995. Best score 184 bits
Score difference with first non-orthologous sequence - L.thermotolerans:184 P.jiroveci:184

C5DDM8              	100.00%		L0PA27              	100.00%
Bootstrap support for C5DDM8 as seed ortholog is 100%.
Bootstrap support for L0PA27 as seed ortholog is 100%.

Group of orthologs #996. Best score 184 bits
Score difference with first non-orthologous sequence - L.thermotolerans:184 P.jiroveci:184

C5DJ65              	100.00%		L0P8S1              	100.00%
Bootstrap support for C5DJ65 as seed ortholog is 100%.
Bootstrap support for L0P8S1 as seed ortholog is 100%.

Group of orthologs #997. Best score 184 bits
Score difference with first non-orthologous sequence - L.thermotolerans:184 P.jiroveci:184

C5E307              	100.00%		L0PA83              	100.00%
Bootstrap support for C5E307 as seed ortholog is 100%.
Bootstrap support for L0PA83 as seed ortholog is 100%.

Group of orthologs #998. Best score 184 bits
Score difference with first non-orthologous sequence - L.thermotolerans:138 P.jiroveci:41

C5DLM0              	100.00%		L0PHW8              	100.00%
Bootstrap support for C5DLM0 as seed ortholog is 100%.
Bootstrap support for L0PHW8 as seed ortholog is 96%.

Group of orthologs #999. Best score 184 bits
Score difference with first non-orthologous sequence - L.thermotolerans:184 P.jiroveci:184

C5E2C9              	100.00%		L0PG54              	100.00%
Bootstrap support for C5E2C9 as seed ortholog is 100%.
Bootstrap support for L0PG54 as seed ortholog is 100%.