###################################
1242 groups of orthologs
1463 in-paralogs from L.major
1445 in-paralogs from S.stipitis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 1686 bits
Score difference with first non-orthologous sequence - L.major:1686 S.stipitis:1686

E9AFM0              	100.00%		A3LYV9              	100.00%
Bootstrap support for E9AFM0 as seed ortholog is 100%.
Bootstrap support for A3LYV9 as seed ortholog is 100%.

Group of orthologs #2. Best score 1652 bits
Score difference with first non-orthologous sequence - L.major:1652 S.stipitis:1652

Q4QD18              	100.00%		A3LSZ4              	100.00%
Bootstrap support for Q4QD18 as seed ortholog is 100%.
Bootstrap support for A3LSZ4 as seed ortholog is 100%.

Group of orthologs #3. Best score 1562 bits
Score difference with first non-orthologous sequence - L.major:418 S.stipitis:1562

Q4QBN6              	100.00%		A3LZU2              	100.00%
Bootstrap support for Q4QBN6 as seed ortholog is 99%.
Bootstrap support for A3LZU2 as seed ortholog is 100%.

Group of orthologs #4. Best score 1362 bits
Score difference with first non-orthologous sequence - L.major:1362 S.stipitis:356

Q4QEW0              	100.00%		A3LXW2              	100.00%
Bootstrap support for Q4QEW0 as seed ortholog is 100%.
Bootstrap support for A3LXW2 as seed ortholog is 100%.

Group of orthologs #5. Best score 1330 bits
Score difference with first non-orthologous sequence - L.major:686 S.stipitis:376

Q4QGA4              	100.00%		A3LNR5              	100.00%
Bootstrap support for Q4QGA4 as seed ortholog is 100%.
Bootstrap support for A3LNR5 as seed ortholog is 99%.

Group of orthologs #6. Best score 1227 bits
Score difference with first non-orthologous sequence - L.major:1227 S.stipitis:1227

E9AFR3              	100.00%		A3LPB9              	100.00%
Bootstrap support for E9AFR3 as seed ortholog is 100%.
Bootstrap support for A3LPB9 as seed ortholog is 100%.

Group of orthologs #7. Best score 1143 bits
Score difference with first non-orthologous sequence - L.major:1143 S.stipitis:1143

Q4Q5W1              	100.00%		A3GH39              	100.00%
Bootstrap support for Q4Q5W1 as seed ortholog is 100%.
Bootstrap support for A3GH39 as seed ortholog is 100%.

Group of orthologs #8. Best score 1050 bits
Score difference with first non-orthologous sequence - L.major:827 S.stipitis:629

Q4Q259              	100.00%		A3LNB1              	100.00%
Bootstrap support for Q4Q259 as seed ortholog is 100%.
Bootstrap support for A3LNB1 as seed ortholog is 100%.

Group of orthologs #9. Best score 1041 bits
Score difference with first non-orthologous sequence - L.major:1041 S.stipitis:1041

Q4Q600              	100.00%		A3GID7              	100.00%
Bootstrap support for Q4Q600 as seed ortholog is 100%.
Bootstrap support for A3GID7 as seed ortholog is 100%.

Group of orthologs #10. Best score 1034 bits
Score difference with first non-orthologous sequence - L.major:1034 S.stipitis:1034

Q4QD43              	100.00%		A3LP81              	100.00%
Bootstrap support for Q4QD43 as seed ortholog is 100%.
Bootstrap support for A3LP81 as seed ortholog is 100%.

Group of orthologs #11. Best score 1029 bits
Score difference with first non-orthologous sequence - L.major:797 S.stipitis:570

Q4Q1T9              	100.00%		A3LQG9              	100.00%
Bootstrap support for Q4Q1T9 as seed ortholog is 100%.
Bootstrap support for A3LQG9 as seed ortholog is 100%.

Group of orthologs #12. Best score 1011 bits
Score difference with first non-orthologous sequence - L.major:1011 S.stipitis:789

Q4Q0J9              	100.00%		A3LTD7              	100.00%
Bootstrap support for Q4Q0J9 as seed ortholog is 100%.
Bootstrap support for A3LTD7 as seed ortholog is 100%.

Group of orthologs #13. Best score 1006 bits
Score difference with first non-orthologous sequence - L.major:1006 S.stipitis:1006

Q4Q3H2              	100.00%		A3GEY3              	100.00%
Bootstrap support for Q4Q3H2 as seed ortholog is 100%.
Bootstrap support for A3GEY3 as seed ortholog is 100%.

Group of orthologs #14. Best score 1005 bits
Score difference with first non-orthologous sequence - L.major:1005 S.stipitis:1005

Q4Q1R2              	100.00%		A3LV67              	100.00%
Bootstrap support for Q4Q1R2 as seed ortholog is 100%.
Bootstrap support for A3LV67 as seed ortholog is 100%.

Group of orthologs #15. Best score 990 bits
Score difference with first non-orthologous sequence - L.major:408 S.stipitis:990

Q4Q836              	100.00%		A3GF24              	100.00%
Bootstrap support for Q4Q836 as seed ortholog is 100%.
Bootstrap support for A3GF24 as seed ortholog is 100%.

Group of orthologs #16. Best score 975 bits
Score difference with first non-orthologous sequence - L.major:975 S.stipitis:975

Q4Q6P8              	100.00%		A3GFG5              	100.00%
Bootstrap support for Q4Q6P8 as seed ortholog is 100%.
Bootstrap support for A3GFG5 as seed ortholog is 100%.

Group of orthologs #17. Best score 970 bits
Score difference with first non-orthologous sequence - L.major:970 S.stipitis:970

Q4QDT8              	100.00%		A3LNC3              	100.00%
                    	       		A3LNW6              	9.65%
                    	       		A3GHC9              	8.67%
Bootstrap support for Q4QDT8 as seed ortholog is 100%.
Bootstrap support for A3LNC3 as seed ortholog is 100%.

Group of orthologs #18. Best score 960 bits
Score difference with first non-orthologous sequence - L.major:960 S.stipitis:960

Q4Q8H8              	100.00%		A3LNA5              	100.00%
                    	       		A3LP83              	5.19%
Bootstrap support for Q4Q8H8 as seed ortholog is 100%.
Bootstrap support for A3LNA5 as seed ortholog is 100%.

Group of orthologs #19. Best score 932 bits
Score difference with first non-orthologous sequence - L.major:932 S.stipitis:639

Q4Q418              	100.00%		A3LYU1              	100.00%
Bootstrap support for Q4Q418 as seed ortholog is 100%.
Bootstrap support for A3LYU1 as seed ortholog is 100%.

Group of orthologs #20. Best score 930 bits
Score difference with first non-orthologous sequence - L.major:137 S.stipitis:180

Q4Q7Y4              	100.00%		A3GGW0              	100.00%
                    	       		A3LXD9              	45.71%
Bootstrap support for Q4Q7Y4 as seed ortholog is 99%.
Bootstrap support for A3GGW0 as seed ortholog is 99%.

Group of orthologs #21. Best score 870 bits
Score difference with first non-orthologous sequence - L.major:400 S.stipitis:870

Q4Q4I0              	100.00%		A3LPD9              	100.00%
Q4Q4I6              	99.04%		
Bootstrap support for Q4Q4I0 as seed ortholog is 100%.
Bootstrap support for A3LPD9 as seed ortholog is 100%.

Group of orthologs #22. Best score 858 bits
Score difference with first non-orthologous sequence - L.major:858 S.stipitis:726

Q4Q6X7              	100.00%		A3LVX8              	100.00%
Bootstrap support for Q4Q6X7 as seed ortholog is 100%.
Bootstrap support for A3LVX8 as seed ortholog is 100%.

Group of orthologs #23. Best score 850 bits
Score difference with first non-orthologous sequence - L.major:850 S.stipitis:850

Q4Q9I8              	100.00%		A3LQC8              	100.00%
Bootstrap support for Q4Q9I8 as seed ortholog is 100%.
Bootstrap support for A3LQC8 as seed ortholog is 100%.

Group of orthologs #24. Best score 833 bits
Score difference with first non-orthologous sequence - L.major:113 S.stipitis:833

Q4Q0C8              	100.00%		A3LYF1              	100.00%
Bootstrap support for Q4Q0C8 as seed ortholog is 83%.
Bootstrap support for A3LYF1 as seed ortholog is 100%.

Group of orthologs #25. Best score 800 bits
Score difference with first non-orthologous sequence - L.major:800 S.stipitis:305

Q4Q1B9              	100.00%		A3LY83              	100.00%
Bootstrap support for Q4Q1B9 as seed ortholog is 100%.
Bootstrap support for A3LY83 as seed ortholog is 100%.

Group of orthologs #26. Best score 760 bits
Score difference with first non-orthologous sequence - L.major:760 S.stipitis:760

E9ACE5              	100.00%		A3LN85              	100.00%
Bootstrap support for E9ACE5 as seed ortholog is 100%.
Bootstrap support for A3LN85 as seed ortholog is 100%.

Group of orthologs #27. Best score 757 bits
Score difference with first non-orthologous sequence - L.major:757 S.stipitis:757

Q4QG44              	100.00%		A3LV95              	100.00%
Bootstrap support for Q4QG44 as seed ortholog is 100%.
Bootstrap support for A3LV95 as seed ortholog is 100%.

Group of orthologs #28. Best score 756 bits
Score difference with first non-orthologous sequence - L.major:668 S.stipitis:674

Q4QAG8              	100.00%		A3GF06              	100.00%
Bootstrap support for Q4QAG8 as seed ortholog is 100%.
Bootstrap support for A3GF06 as seed ortholog is 100%.

Group of orthologs #29. Best score 740 bits
Score difference with first non-orthologous sequence - L.major:740 S.stipitis:740

Q4QBJ3              	100.00%		A3LRI3              	100.00%
Bootstrap support for Q4QBJ3 as seed ortholog is 100%.
Bootstrap support for A3LRI3 as seed ortholog is 100%.

Group of orthologs #30. Best score 736 bits
Score difference with first non-orthologous sequence - L.major:61 S.stipitis:736

Q4Q171              	100.00%		A3LZW8              	100.00%
Bootstrap support for Q4Q171 as seed ortholog is 81%.
Bootstrap support for A3LZW8 as seed ortholog is 100%.

Group of orthologs #31. Best score 719 bits
Score difference with first non-orthologous sequence - L.major:167 S.stipitis:127

Q4Q744              	100.00%		A3LYI6              	100.00%
Q4Q745              	100.00%		
Q4Q740              	96.16%		
Q4Q747              	80.98%		
Bootstrap support for Q4Q744 as seed ortholog is 99%.
Bootstrap support for Q4Q745 as seed ortholog is 99%.
Bootstrap support for A3LYI6 as seed ortholog is 99%.

Group of orthologs #32. Best score 716 bits
Score difference with first non-orthologous sequence - L.major:716 S.stipitis:716

Q4Q2B0              	100.00%		A3LNZ5              	100.00%
Bootstrap support for Q4Q2B0 as seed ortholog is 100%.
Bootstrap support for A3LNZ5 as seed ortholog is 100%.

Group of orthologs #33. Best score 711 bits
Score difference with first non-orthologous sequence - L.major:711 S.stipitis:711

Q4QE66              	100.00%		A3M082              	100.00%
Bootstrap support for Q4QE66 as seed ortholog is 100%.
Bootstrap support for A3M082 as seed ortholog is 100%.

Group of orthologs #34. Best score 709 bits
Score difference with first non-orthologous sequence - L.major:709 S.stipitis:709

Q4Q735              	100.00%		A3LP93              	100.00%
                    	       		A3LZQ8              	38.60%
Bootstrap support for Q4Q735 as seed ortholog is 100%.
Bootstrap support for A3LP93 as seed ortholog is 100%.

Group of orthologs #35. Best score 704 bits
Score difference with first non-orthologous sequence - L.major:485 S.stipitis:479

Q4QEI9              	100.00%		A3LQC6              	100.00%
Q4QEI8              	98.52%		
Bootstrap support for Q4QEI9 as seed ortholog is 100%.
Bootstrap support for A3LQC6 as seed ortholog is 100%.

Group of orthologs #36. Best score 693 bits
Score difference with first non-orthologous sequence - L.major:693 S.stipitis:693

E9ADY5              	100.00%		A3LYX5              	100.00%
Bootstrap support for E9ADY5 as seed ortholog is 100%.
Bootstrap support for A3LYX5 as seed ortholog is 100%.

Group of orthologs #37. Best score 683 bits
Score difference with first non-orthologous sequence - L.major:537 S.stipitis:540

Q4Q821              	100.00%		A3LY21              	100.00%
Bootstrap support for Q4Q821 as seed ortholog is 100%.
Bootstrap support for A3LY21 as seed ortholog is 100%.

Group of orthologs #38. Best score 682 bits
Score difference with first non-orthologous sequence - L.major:398 S.stipitis:519

Q4QBZ6              	100.00%		A3LX42              	100.00%
Q4QI42              	100.00%		
Q4Q4C4              	97.80%		
Bootstrap support for Q4QBZ6 as seed ortholog is 100%.
Bootstrap support for Q4QI42 as seed ortholog is 100%.
Bootstrap support for A3LX42 as seed ortholog is 100%.

Group of orthologs #39. Best score 660 bits
Score difference with first non-orthologous sequence - L.major:660 S.stipitis:660

Q4Q3R1              	100.00%		A3LPM4              	100.00%
Bootstrap support for Q4Q3R1 as seed ortholog is 100%.
Bootstrap support for A3LPM4 as seed ortholog is 100%.

Group of orthologs #40. Best score 658 bits
Score difference with first non-orthologous sequence - L.major:161 S.stipitis:252

E9AEU3              	100.00%		A3LP11              	100.00%
Bootstrap support for E9AEU3 as seed ortholog is 99%.
Bootstrap support for A3LP11 as seed ortholog is 99%.

Group of orthologs #41. Best score 657 bits
Score difference with first non-orthologous sequence - L.major:657 S.stipitis:343

E9AEW4              	100.00%		A3LWK8              	100.00%
Bootstrap support for E9AEW4 as seed ortholog is 100%.
Bootstrap support for A3LWK8 as seed ortholog is 100%.

Group of orthologs #42. Best score 651 bits
Score difference with first non-orthologous sequence - L.major:264 S.stipitis:569

Q4Q2M2              	100.00%		A3GGR7              	100.00%
Bootstrap support for Q4Q2M2 as seed ortholog is 99%.
Bootstrap support for A3GGR7 as seed ortholog is 100%.

Group of orthologs #43. Best score 648 bits
Score difference with first non-orthologous sequence - L.major:570 S.stipitis:305

Q4QII2              	100.00%		A3LVX3              	100.00%
Bootstrap support for Q4QII2 as seed ortholog is 100%.
Bootstrap support for A3LVX3 as seed ortholog is 99%.

Group of orthologs #44. Best score 645 bits
Score difference with first non-orthologous sequence - L.major:256 S.stipitis:101

Q4QBE9              	100.00%		A3LPF9              	100.00%
Q4QBF4              	33.08%		A3LYW5              	18.27%
Q4QBF3              	31.45%		A3LNZ8              	16.55%
Q4Q6D6              	17.27%		A3LQB3              	16.51%
Q4Q6D4              	14.14%		A3LWA2              	15.88%
Q4Q6D5              	13.94%		
Q4Q6B9              	12.84%		
Bootstrap support for Q4QBE9 as seed ortholog is 99%.
Bootstrap support for A3LPF9 as seed ortholog is 90%.

Group of orthologs #45. Best score 645 bits
Score difference with first non-orthologous sequence - L.major:407 S.stipitis:499

Q4QGC5              	100.00%		A3LTP2              	100.00%
Bootstrap support for Q4QGC5 as seed ortholog is 100%.
Bootstrap support for A3LTP2 as seed ortholog is 100%.

Group of orthologs #46. Best score 643 bits
Score difference with first non-orthologous sequence - L.major:643 S.stipitis:151

Q4QAC4              	100.00%		P34736              	100.00%
Bootstrap support for Q4QAC4 as seed ortholog is 100%.
Bootstrap support for P34736 as seed ortholog is 99%.

Group of orthologs #47. Best score 638 bits
Score difference with first non-orthologous sequence - L.major:638 S.stipitis:638

Q4Q6R3              	100.00%		A3LVA0              	100.00%
Bootstrap support for Q4Q6R3 as seed ortholog is 100%.
Bootstrap support for A3LVA0 as seed ortholog is 100%.

Group of orthologs #48. Best score 630 bits
Score difference with first non-orthologous sequence - L.major:630 S.stipitis:630

Q4QDS0              	100.00%		A3LY68              	100.00%
Q4QDS1              	82.36%		
Bootstrap support for Q4QDS0 as seed ortholog is 100%.
Bootstrap support for A3LY68 as seed ortholog is 100%.

Group of orthologs #49. Best score 629 bits
Score difference with first non-orthologous sequence - L.major:570 S.stipitis:629

E9AFL0              	100.00%		A3LZ90              	100.00%
Bootstrap support for E9AFL0 as seed ortholog is 100%.
Bootstrap support for A3LZ90 as seed ortholog is 100%.

Group of orthologs #50. Best score 627 bits
Score difference with first non-orthologous sequence - L.major:415 S.stipitis:397

E9AF31              	100.00%		A3LY53              	100.00%
                    	       		A3GFD3              	59.52%
Bootstrap support for E9AF31 as seed ortholog is 100%.
Bootstrap support for A3LY53 as seed ortholog is 100%.

Group of orthologs #51. Best score 620 bits
Score difference with first non-orthologous sequence - L.major:620 S.stipitis:620

Q4Q5I2              	100.00%		A3LYE9              	100.00%
Bootstrap support for Q4Q5I2 as seed ortholog is 100%.
Bootstrap support for A3LYE9 as seed ortholog is 100%.

Group of orthologs #52. Best score 617 bits
Score difference with first non-orthologous sequence - L.major:617 S.stipitis:617

Q4Q8I2              	100.00%		A3M0C1              	100.00%
Bootstrap support for Q4Q8I2 as seed ortholog is 100%.
Bootstrap support for A3M0C1 as seed ortholog is 100%.

Group of orthologs #53. Best score 614 bits
Score difference with first non-orthologous sequence - L.major:614 S.stipitis:614

Q4QJA4              	100.00%		A3LU95              	100.00%
Bootstrap support for Q4QJA4 as seed ortholog is 100%.
Bootstrap support for A3LU95 as seed ortholog is 100%.

Group of orthologs #54. Best score 603 bits
Score difference with first non-orthologous sequence - L.major:438 S.stipitis:482

Q4Q9X5              	100.00%		A3LST8              	100.00%
Q4Q9X6              	100.00%		
Bootstrap support for Q4Q9X5 as seed ortholog is 100%.
Bootstrap support for Q4Q9X6 as seed ortholog is 100%.
Bootstrap support for A3LST8 as seed ortholog is 100%.

Group of orthologs #55. Best score 602 bits
Score difference with first non-orthologous sequence - L.major:602 S.stipitis:602

Q4Q124              	100.00%		A3LNU0              	100.00%
Bootstrap support for Q4Q124 as seed ortholog is 100%.
Bootstrap support for A3LNU0 as seed ortholog is 100%.

Group of orthologs #56. Best score 598 bits
Score difference with first non-orthologous sequence - L.major:505 S.stipitis:598

E9ADA4              	100.00%		A3LTV5              	100.00%
Bootstrap support for E9ADA4 as seed ortholog is 100%.
Bootstrap support for A3LTV5 as seed ortholog is 100%.

Group of orthologs #57. Best score 595 bits
Score difference with first non-orthologous sequence - L.major:595 S.stipitis:595

Q4QEN2              	100.00%		A3LYS3              	100.00%
Bootstrap support for Q4QEN2 as seed ortholog is 100%.
Bootstrap support for A3LYS3 as seed ortholog is 100%.

Group of orthologs #58. Best score 593 bits
Score difference with first non-orthologous sequence - L.major:129 S.stipitis:593

Q9NF77              	100.00%		A3LQ33              	100.00%
Bootstrap support for Q9NF77 as seed ortholog is 95%.
Bootstrap support for A3LQ33 as seed ortholog is 100%.

Group of orthologs #59. Best score 591 bits
Score difference with first non-orthologous sequence - L.major:410 S.stipitis:368

E9AEL4              	100.00%		A3LWX3              	100.00%
Bootstrap support for E9AEL4 as seed ortholog is 100%.
Bootstrap support for A3LWX3 as seed ortholog is 100%.

Group of orthologs #60. Best score 590 bits
Score difference with first non-orthologous sequence - L.major:590 S.stipitis:590

Q4QGN9              	100.00%		A3LXX9              	100.00%
Bootstrap support for Q4QGN9 as seed ortholog is 100%.
Bootstrap support for A3LXX9 as seed ortholog is 100%.

Group of orthologs #61. Best score 585 bits
Score difference with first non-orthologous sequence - L.major:441 S.stipitis:585

Q4QAA2              	100.00%		A3M0P3              	100.00%
Bootstrap support for Q4QAA2 as seed ortholog is 100%.
Bootstrap support for A3M0P3 as seed ortholog is 100%.

Group of orthologs #62. Best score 578 bits
Score difference with first non-orthologous sequence - L.major:498 S.stipitis:578

Q4Q219              	100.00%		A3GHT9              	100.00%
Bootstrap support for Q4Q219 as seed ortholog is 100%.
Bootstrap support for A3GHT9 as seed ortholog is 100%.

Group of orthologs #63. Best score 577 bits
Score difference with first non-orthologous sequence - L.major:486 S.stipitis:577

Q4QB32              	100.00%		A3LNN0              	100.00%
Bootstrap support for Q4QB32 as seed ortholog is 100%.
Bootstrap support for A3LNN0 as seed ortholog is 100%.

Group of orthologs #64. Best score 572 bits
Score difference with first non-orthologous sequence - L.major:572 S.stipitis:572

Q4Q878              	100.00%		A3LUF6              	100.00%
Bootstrap support for Q4Q878 as seed ortholog is 100%.
Bootstrap support for A3LUF6 as seed ortholog is 100%.

Group of orthologs #65. Best score 571 bits
Score difference with first non-orthologous sequence - L.major:571 S.stipitis:571

Q4QIY2              	100.00%		A3LUH0              	100.00%
Bootstrap support for Q4QIY2 as seed ortholog is 100%.
Bootstrap support for A3LUH0 as seed ortholog is 100%.

Group of orthologs #66. Best score 570 bits
Score difference with first non-orthologous sequence - L.major:570 S.stipitis:570

Q4Q2T4              	100.00%		A3LPC5              	100.00%
Bootstrap support for Q4Q2T4 as seed ortholog is 100%.
Bootstrap support for A3LPC5 as seed ortholog is 100%.

Group of orthologs #67. Best score 570 bits
Score difference with first non-orthologous sequence - L.major:570 S.stipitis:142

Q4Q0P3              	100.00%		A3LYG2              	100.00%
Bootstrap support for Q4Q0P3 as seed ortholog is 100%.
Bootstrap support for A3LYG2 as seed ortholog is 99%.

Group of orthologs #68. Best score 568 bits
Score difference with first non-orthologous sequence - L.major:323 S.stipitis:343

Q4Q8N7              	100.00%		A3GHZ1              	100.00%
Bootstrap support for Q4Q8N7 as seed ortholog is 100%.
Bootstrap support for A3GHZ1 as seed ortholog is 100%.

Group of orthologs #69. Best score 567 bits
Score difference with first non-orthologous sequence - L.major:567 S.stipitis:567

Q4Q2J4              	100.00%		A3GEZ1              	100.00%
Bootstrap support for Q4Q2J4 as seed ortholog is 100%.
Bootstrap support for A3GEZ1 as seed ortholog is 100%.

Group of orthologs #70. Best score 567 bits
Score difference with first non-orthologous sequence - L.major:567 S.stipitis:567

Q4Q4U5              	100.00%		A3LQE3              	100.00%
Bootstrap support for Q4Q4U5 as seed ortholog is 100%.
Bootstrap support for A3LQE3 as seed ortholog is 100%.

Group of orthologs #71. Best score 566 bits
Score difference with first non-orthologous sequence - L.major:355 S.stipitis:185

Q9U1E8              	100.00%		A3GI55              	100.00%
Bootstrap support for Q9U1E8 as seed ortholog is 100%.
Bootstrap support for A3GI55 as seed ortholog is 100%.

Group of orthologs #72. Best score 559 bits
Score difference with first non-orthologous sequence - L.major:559 S.stipitis:559

Q4QBU0              	100.00%		A3GFY8              	100.00%
Bootstrap support for Q4QBU0 as seed ortholog is 100%.
Bootstrap support for A3GFY8 as seed ortholog is 100%.

Group of orthologs #73. Best score 551 bits
Score difference with first non-orthologous sequence - L.major:551 S.stipitis:551

Q4Q3A5              	100.00%		A3LYL7              	100.00%
Bootstrap support for Q4Q3A5 as seed ortholog is 100%.
Bootstrap support for A3LYL7 as seed ortholog is 100%.

Group of orthologs #74. Best score 548 bits
Score difference with first non-orthologous sequence - L.major:548 S.stipitis:548

Q4QHI7              	100.00%		A3LT36              	100.00%
                    	       		A3LR11              	24.37%
Bootstrap support for Q4QHI7 as seed ortholog is 100%.
Bootstrap support for A3LT36 as seed ortholog is 100%.

Group of orthologs #75. Best score 547 bits
Score difference with first non-orthologous sequence - L.major:307 S.stipitis:547

Q4Q417              	100.00%		A3GFQ5              	100.00%
                    	       		A3LQ23              	37.19%
Bootstrap support for Q4Q417 as seed ortholog is 100%.
Bootstrap support for A3GFQ5 as seed ortholog is 100%.

Group of orthologs #76. Best score 547 bits
Score difference with first non-orthologous sequence - L.major:365 S.stipitis:547

Q4Q826              	100.00%		A3LR24              	100.00%
Bootstrap support for Q4Q826 as seed ortholog is 100%.
Bootstrap support for A3LR24 as seed ortholog is 100%.

Group of orthologs #77. Best score 544 bits
Score difference with first non-orthologous sequence - L.major:483 S.stipitis:544

Q4QC87              	100.00%		A3GGF2              	100.00%
Bootstrap support for Q4QC87 as seed ortholog is 100%.
Bootstrap support for A3GGF2 as seed ortholog is 100%.

Group of orthologs #78. Best score 543 bits
Score difference with first non-orthologous sequence - L.major:308 S.stipitis:151

E9AD83              	100.00%		A3LVD6              	100.00%
Bootstrap support for E9AD83 as seed ortholog is 100%.
Bootstrap support for A3LVD6 as seed ortholog is 99%.

Group of orthologs #79. Best score 541 bits
Score difference with first non-orthologous sequence - L.major:163 S.stipitis:541

Q4Q1M0              	100.00%		A3LXU1              	100.00%
Q4Q1M1              	72.47%		
Q4Q594              	12.92%		
Bootstrap support for Q4Q1M0 as seed ortholog is 99%.
Bootstrap support for A3LXU1 as seed ortholog is 100%.

Group of orthologs #80. Best score 541 bits
Score difference with first non-orthologous sequence - L.major:541 S.stipitis:541

Q4Q5H2              	100.00%		A3GH27              	100.00%
Bootstrap support for Q4Q5H2 as seed ortholog is 100%.
Bootstrap support for A3GH27 as seed ortholog is 100%.

Group of orthologs #81. Best score 540 bits
Score difference with first non-orthologous sequence - L.major:436 S.stipitis:464

Q4QBC0              	100.00%		A3LW76              	100.00%
Q9U0W1              	81.54%		A3LXD8              	37.65%
Bootstrap support for Q4QBC0 as seed ortholog is 100%.
Bootstrap support for A3LW76 as seed ortholog is 100%.

Group of orthologs #82. Best score 539 bits
Score difference with first non-orthologous sequence - L.major:539 S.stipitis:539

Q4Q401              	100.00%		A3LPZ4              	100.00%
Bootstrap support for Q4Q401 as seed ortholog is 100%.
Bootstrap support for A3LPZ4 as seed ortholog is 100%.

Group of orthologs #83. Best score 539 bits
Score difference with first non-orthologous sequence - L.major:539 S.stipitis:539

Q4QG45              	100.00%		A3LNG1              	100.00%
Bootstrap support for Q4QG45 as seed ortholog is 100%.
Bootstrap support for A3LNG1 as seed ortholog is 100%.

Group of orthologs #84. Best score 538 bits
Score difference with first non-orthologous sequence - L.major:538 S.stipitis:538

Q4Q0X8              	100.00%		A3LTW6              	100.00%
Bootstrap support for Q4Q0X8 as seed ortholog is 100%.
Bootstrap support for A3LTW6 as seed ortholog is 100%.

Group of orthologs #85. Best score 531 bits
Score difference with first non-orthologous sequence - L.major:531 S.stipitis:531

Q4Q893              	100.00%		A3LPQ1              	100.00%
Bootstrap support for Q4Q893 as seed ortholog is 100%.
Bootstrap support for A3LPQ1 as seed ortholog is 100%.

Group of orthologs #86. Best score 530 bits
Score difference with first non-orthologous sequence - L.major:530 S.stipitis:530

E9ADF8              	100.00%		A3LS00              	100.00%
E9ADF9              	99.63%		
Bootstrap support for E9ADF8 as seed ortholog is 100%.
Bootstrap support for A3LS00 as seed ortholog is 100%.

Group of orthologs #87. Best score 529 bits
Score difference with first non-orthologous sequence - L.major:101 S.stipitis:431

Q4QG01              	100.00%		A3LZJ0              	100.00%
Q4QHT5              	100.00%		A3GHD2              	100.00%
                    	       		A3LZD5              	33.82%
Bootstrap support for Q4QG01 as seed ortholog is 93%.
Bootstrap support for Q4QHT5 as seed ortholog is 70%.
Alternative seed ortholog is Q4Q2T2 (101 bits away from this cluster)
Bootstrap support for A3LZJ0 as seed ortholog is 100%.
Bootstrap support for A3GHD2 as seed ortholog is 100%.

Group of orthologs #88. Best score 527 bits
Score difference with first non-orthologous sequence - L.major:527 S.stipitis:527

Q4Q3L5              	100.00%		A3LTA6              	100.00%
Bootstrap support for Q4Q3L5 as seed ortholog is 100%.
Bootstrap support for A3LTA6 as seed ortholog is 100%.

Group of orthologs #89. Best score 524 bits
Score difference with first non-orthologous sequence - L.major:419 S.stipitis:428

E9ACG7              	100.00%		A3LNR1              	100.00%
Bootstrap support for E9ACG7 as seed ortholog is 100%.
Bootstrap support for A3LNR1 as seed ortholog is 100%.

Group of orthologs #90. Best score 517 bits
Score difference with first non-orthologous sequence - L.major:159 S.stipitis:355

Q4Q0B5              	100.00%		A3GFA2              	100.00%
                    	       		A3LSD0              	8.62%
Bootstrap support for Q4Q0B5 as seed ortholog is 99%.
Bootstrap support for A3GFA2 as seed ortholog is 100%.

Group of orthologs #91. Best score 517 bits
Score difference with first non-orthologous sequence - L.major:517 S.stipitis:517

Q4QCR1              	100.00%		A3M067              	100.00%
Bootstrap support for Q4QCR1 as seed ortholog is 100%.
Bootstrap support for A3M067 as seed ortholog is 100%.

Group of orthologs #92. Best score 516 bits
Score difference with first non-orthologous sequence - L.major:450 S.stipitis:516

Q4QFY8              	100.00%		A3GEY9              	100.00%
Bootstrap support for Q4QFY8 as seed ortholog is 100%.
Bootstrap support for A3GEY9 as seed ortholog is 100%.

Group of orthologs #93. Best score 516 bits
Score difference with first non-orthologous sequence - L.major:516 S.stipitis:516

Q4QFJ8              	100.00%		A3GI74              	100.00%
Bootstrap support for Q4QFJ8 as seed ortholog is 100%.
Bootstrap support for A3GI74 as seed ortholog is 100%.

Group of orthologs #94. Best score 508 bits
Score difference with first non-orthologous sequence - L.major:508 S.stipitis:508

E9ADL4              	100.00%		A3GHV9              	100.00%
Bootstrap support for E9ADL4 as seed ortholog is 100%.
Bootstrap support for A3GHV9 as seed ortholog is 100%.

Group of orthologs #95. Best score 506 bits
Score difference with first non-orthologous sequence - L.major:65 S.stipitis:288

Q4QED4              	100.00%		A3LP26              	100.00%
Q4QIM8              	6.81%		
Q4QIM6              	6.35%		
Bootstrap support for Q4QED4 as seed ortholog is 82%.
Bootstrap support for A3LP26 as seed ortholog is 100%.

Group of orthologs #96. Best score 501 bits
Score difference with first non-orthologous sequence - L.major:501 S.stipitis:501

Q4QAY7              	100.00%		A3GF60              	100.00%
Q4Q5J0              	17.28%		A3LUS8              	24.63%
Bootstrap support for Q4QAY7 as seed ortholog is 100%.
Bootstrap support for A3GF60 as seed ortholog is 100%.

Group of orthologs #97. Best score 501 bits
Score difference with first non-orthologous sequence - L.major:218 S.stipitis:501

Q4QD53              	100.00%		A3LW02              	100.00%
Bootstrap support for Q4QD53 as seed ortholog is 100%.
Bootstrap support for A3LW02 as seed ortholog is 100%.

Group of orthologs #98. Best score 501 bits
Score difference with first non-orthologous sequence - L.major:501 S.stipitis:501

Q4QIN2              	100.00%		A3LZC1              	100.00%
Bootstrap support for Q4QIN2 as seed ortholog is 100%.
Bootstrap support for A3LZC1 as seed ortholog is 100%.

Group of orthologs #99. Best score 497 bits
Score difference with first non-orthologous sequence - L.major:304 S.stipitis:497

Q4Q4U1              	100.00%		A3LYY5              	100.00%
Bootstrap support for Q4Q4U1 as seed ortholog is 100%.
Bootstrap support for A3LYY5 as seed ortholog is 100%.

Group of orthologs #100. Best score 495 bits
Score difference with first non-orthologous sequence - L.major:495 S.stipitis:158

Q4QE33              	100.00%		A3LZG4              	100.00%
Bootstrap support for Q4QE33 as seed ortholog is 100%.
Bootstrap support for A3LZG4 as seed ortholog is 99%.

Group of orthologs #101. Best score 494 bits
Score difference with first non-orthologous sequence - L.major:494 S.stipitis:494

Q4QC07              	100.00%		A3GFP7              	100.00%
Bootstrap support for Q4QC07 as seed ortholog is 100%.
Bootstrap support for A3GFP7 as seed ortholog is 100%.

Group of orthologs #102. Best score 492 bits
Score difference with first non-orthologous sequence - L.major:492 S.stipitis:492

Q4QBT5              	100.00%		A3GEY5              	100.00%
Bootstrap support for Q4QBT5 as seed ortholog is 100%.
Bootstrap support for A3GEY5 as seed ortholog is 100%.

Group of orthologs #103. Best score 489 bits
Score difference with first non-orthologous sequence - L.major:368 S.stipitis:489

E9ACJ9              	100.00%		A3M0A5              	100.00%
Bootstrap support for E9ACJ9 as seed ortholog is 100%.
Bootstrap support for A3M0A5 as seed ortholog is 100%.

Group of orthologs #104. Best score 488 bits
Score difference with first non-orthologous sequence - L.major:129 S.stipitis:229

Q4QFF7              	100.00%		A3GEX5              	100.00%
Bootstrap support for Q4QFF7 as seed ortholog is 99%.
Bootstrap support for A3GEX5 as seed ortholog is 100%.

Group of orthologs #105. Best score 488 bits
Score difference with first non-orthologous sequence - L.major:488 S.stipitis:488

Q4QGS2              	100.00%		A3LNB5              	100.00%
Bootstrap support for Q4QGS2 as seed ortholog is 100%.
Bootstrap support for A3LNB5 as seed ortholog is 100%.

Group of orthologs #106. Best score 488 bits
Score difference with first non-orthologous sequence - L.major:81 S.stipitis:105

Q4Q8K1              	100.00%		A3LZ03              	100.00%
Bootstrap support for Q4Q8K1 as seed ortholog is 99%.
Bootstrap support for A3LZ03 as seed ortholog is 99%.

Group of orthologs #107. Best score 487 bits
Score difference with first non-orthologous sequence - L.major:150 S.stipitis:227

Q4Q6W4              	100.00%		A3LMW4              	100.00%
Bootstrap support for Q4Q6W4 as seed ortholog is 99%.
Bootstrap support for A3LMW4 as seed ortholog is 100%.

Group of orthologs #108. Best score 485 bits
Score difference with first non-orthologous sequence - L.major:324 S.stipitis:485

E9AD84              	100.00%		A3M0K6              	100.00%
Bootstrap support for E9AD84 as seed ortholog is 100%.
Bootstrap support for A3M0K6 as seed ortholog is 100%.

Group of orthologs #109. Best score 483 bits
Score difference with first non-orthologous sequence - L.major:483 S.stipitis:483

Q4Q6T6              	100.00%		A3LNJ6              	100.00%
Bootstrap support for Q4Q6T6 as seed ortholog is 100%.
Bootstrap support for A3LNJ6 as seed ortholog is 100%.

Group of orthologs #110. Best score 482 bits
Score difference with first non-orthologous sequence - L.major:482 S.stipitis:482

Q4QCF1              	100.00%		A3LQX4              	100.00%
Bootstrap support for Q4QCF1 as seed ortholog is 100%.
Bootstrap support for A3LQX4 as seed ortholog is 100%.

Group of orthologs #111. Best score 482 bits
Score difference with first non-orthologous sequence - L.major:289 S.stipitis:225

Q4Q9N1              	100.00%		A3LWX5              	100.00%
Bootstrap support for Q4Q9N1 as seed ortholog is 100%.
Bootstrap support for A3LWX5 as seed ortholog is 99%.

Group of orthologs #112. Best score 481 bits
Score difference with first non-orthologous sequence - L.major:481 S.stipitis:481

Q4QF83              	100.00%		A3LVW5              	100.00%
Bootstrap support for Q4QF83 as seed ortholog is 100%.
Bootstrap support for A3LVW5 as seed ortholog is 100%.

Group of orthologs #113. Best score 476 bits
Score difference with first non-orthologous sequence - L.major:476 S.stipitis:476

Q4QJA6              	100.00%		A3LRF8              	100.00%
Bootstrap support for Q4QJA6 as seed ortholog is 100%.
Bootstrap support for A3LRF8 as seed ortholog is 100%.

Group of orthologs #114. Best score 474 bits
Score difference with first non-orthologous sequence - L.major:474 S.stipitis:474

Q4QFL8              	100.00%		A3LQD6              	100.00%
Bootstrap support for Q4QFL8 as seed ortholog is 100%.
Bootstrap support for A3LQD6 as seed ortholog is 100%.

Group of orthologs #115. Best score 472 bits
Score difference with first non-orthologous sequence - L.major:472 S.stipitis:472

Q4Q131              	100.00%		A3GFY3              	100.00%
Bootstrap support for Q4Q131 as seed ortholog is 100%.
Bootstrap support for A3GFY3 as seed ortholog is 100%.

Group of orthologs #116. Best score 472 bits
Score difference with first non-orthologous sequence - L.major:472 S.stipitis:410

Q4Q6W5              	100.00%		A3LWB3              	100.00%
Bootstrap support for Q4Q6W5 as seed ortholog is 100%.
Bootstrap support for A3LWB3 as seed ortholog is 100%.

Group of orthologs #117. Best score 472 bits
Score difference with first non-orthologous sequence - L.major:255 S.stipitis:472

Q9U1E0              	100.00%		A3LTZ2              	100.00%
Bootstrap support for Q9U1E0 as seed ortholog is 100%.
Bootstrap support for A3LTZ2 as seed ortholog is 100%.

Group of orthologs #118. Best score 470 bits
Score difference with first non-orthologous sequence - L.major:470 S.stipitis:470

Q4Q1J6              	100.00%		A3LPM3              	100.00%
Bootstrap support for Q4Q1J6 as seed ortholog is 100%.
Bootstrap support for A3LPM3 as seed ortholog is 100%.

Group of orthologs #119. Best score 469 bits
Score difference with first non-orthologous sequence - L.major:106 S.stipitis:160

Q4Q9W1              	100.00%		A3LP07              	100.00%
Bootstrap support for Q4Q9W1 as seed ortholog is 99%.
Bootstrap support for A3LP07 as seed ortholog is 100%.

Group of orthologs #120. Best score 468 bits
Score difference with first non-orthologous sequence - L.major:468 S.stipitis:468

Q4Q3K1              	100.00%		A3LYR5              	100.00%
Bootstrap support for Q4Q3K1 as seed ortholog is 100%.
Bootstrap support for A3LYR5 as seed ortholog is 100%.

Group of orthologs #121. Best score 467 bits
Score difference with first non-orthologous sequence - L.major:467 S.stipitis:467

E9AE82              	100.00%		A3LNY6              	100.00%
                    	       		A3LZD2              	8.57%
Bootstrap support for E9AE82 as seed ortholog is 100%.
Bootstrap support for A3LNY6 as seed ortholog is 100%.

Group of orthologs #122. Best score 467 bits
Score difference with first non-orthologous sequence - L.major:181 S.stipitis:197

Q4Q5P5              	100.00%		A3LQ01              	100.00%
Bootstrap support for Q4Q5P5 as seed ortholog is 99%.
Bootstrap support for A3LQ01 as seed ortholog is 99%.

Group of orthologs #123. Best score 466 bits
Score difference with first non-orthologous sequence - L.major:466 S.stipitis:466

Q4QDX3              	100.00%		A3M0F2              	100.00%
Q4QDX2              	89.71%		
Bootstrap support for Q4QDX3 as seed ortholog is 100%.
Bootstrap support for A3M0F2 as seed ortholog is 100%.

Group of orthologs #124. Best score 466 bits
Score difference with first non-orthologous sequence - L.major:466 S.stipitis:466

Q4QEL1              	100.00%		A3GHL1              	100.00%
Bootstrap support for Q4QEL1 as seed ortholog is 100%.
Bootstrap support for A3GHL1 as seed ortholog is 100%.

Group of orthologs #125. Best score 465 bits
Score difference with first non-orthologous sequence - L.major:314 S.stipitis:177

Q4QA20              	100.00%		A3LX20              	100.00%
Bootstrap support for Q4QA20 as seed ortholog is 100%.
Bootstrap support for A3LX20 as seed ortholog is 99%.

Group of orthologs #126. Best score 464 bits
Score difference with first non-orthologous sequence - L.major:283 S.stipitis:464

Q4QAP2              	100.00%		A3LW17              	100.00%
Bootstrap support for Q4QAP2 as seed ortholog is 100%.
Bootstrap support for A3LW17 as seed ortholog is 100%.

Group of orthologs #127. Best score 463 bits
Score difference with first non-orthologous sequence - L.major:463 S.stipitis:463

Q4Q063              	100.00%		A3GFA7              	100.00%
Bootstrap support for Q4Q063 as seed ortholog is 100%.
Bootstrap support for A3GFA7 as seed ortholog is 100%.

Group of orthologs #128. Best score 463 bits
Score difference with first non-orthologous sequence - L.major:463 S.stipitis:267

Q4QGX4              	100.00%		A3GEU5              	100.00%
Bootstrap support for Q4QGX4 as seed ortholog is 100%.
Bootstrap support for A3GEU5 as seed ortholog is 100%.

Group of orthologs #129. Best score 462 bits
Score difference with first non-orthologous sequence - L.major:462 S.stipitis:462

Q4Q6U5              	100.00%		A3LP53              	100.00%
Bootstrap support for Q4Q6U5 as seed ortholog is 100%.
Bootstrap support for A3LP53 as seed ortholog is 100%.

Group of orthologs #130. Best score 460 bits
Score difference with first non-orthologous sequence - L.major:289 S.stipitis:277

Q4Q9Y1              	100.00%		A3LNE3              	100.00%
Bootstrap support for Q4Q9Y1 as seed ortholog is 100%.
Bootstrap support for A3LNE3 as seed ortholog is 100%.

Group of orthologs #131. Best score 458 bits
Score difference with first non-orthologous sequence - L.major:229 S.stipitis:319

Q4QCW5              	100.00%		A3GI18              	100.00%
Bootstrap support for Q4QCW5 as seed ortholog is 100%.
Bootstrap support for A3GI18 as seed ortholog is 100%.

Group of orthologs #132. Best score 455 bits
Score difference with first non-orthologous sequence - L.major:455 S.stipitis:455

Q4QGR8              	100.00%		A3GHT7              	100.00%
Bootstrap support for Q4QGR8 as seed ortholog is 100%.
Bootstrap support for A3GHT7 as seed ortholog is 100%.

Group of orthologs #133. Best score 453 bits
Score difference with first non-orthologous sequence - L.major:60 S.stipitis:164

Q4QIQ9              	100.00%		A3LQW7              	100.00%
Bootstrap support for Q4QIQ9 as seed ortholog is 61%.
Alternative seed ortholog is Q4Q1K8 (60 bits away from this cluster)
Bootstrap support for A3LQW7 as seed ortholog is 99%.

Group of orthologs #134. Best score 452 bits
Score difference with first non-orthologous sequence - L.major:452 S.stipitis:452

Q4QCY4              	100.00%		A3LVS2              	100.00%
Bootstrap support for Q4QCY4 as seed ortholog is 100%.
Bootstrap support for A3LVS2 as seed ortholog is 100%.

Group of orthologs #135. Best score 451 bits
Score difference with first non-orthologous sequence - L.major:451 S.stipitis:451

Q4Q3R6              	100.00%		A3LT63              	100.00%
Bootstrap support for Q4Q3R6 as seed ortholog is 100%.
Bootstrap support for A3LT63 as seed ortholog is 100%.

Group of orthologs #136. Best score 450 bits
Score difference with first non-orthologous sequence - L.major:203 S.stipitis:450

E9AEB2              	100.00%		A3LVF1              	100.00%
Bootstrap support for E9AEB2 as seed ortholog is 100%.
Bootstrap support for A3LVF1 as seed ortholog is 100%.

Group of orthologs #137. Best score 449 bits
Score difference with first non-orthologous sequence - L.major:449 S.stipitis:449

Q4QHR7              	100.00%		A3LVE2              	100.00%
Q4QHR6              	26.95%		
Bootstrap support for Q4QHR7 as seed ortholog is 100%.
Bootstrap support for A3LVE2 as seed ortholog is 100%.

Group of orthologs #138. Best score 448 bits
Score difference with first non-orthologous sequence - L.major:179 S.stipitis:273

Q4Q1P0              	100.00%		A3LNR6              	100.00%
Bootstrap support for Q4Q1P0 as seed ortholog is 99%.
Bootstrap support for A3LNR6 as seed ortholog is 100%.

Group of orthologs #139. Best score 447 bits
Score difference with first non-orthologous sequence - L.major:249 S.stipitis:181

O62591              	100.00%		A3GFI4              	100.00%
Bootstrap support for O62591 as seed ortholog is 100%.
Bootstrap support for A3GFI4 as seed ortholog is 100%.

Group of orthologs #140. Best score 447 bits
Score difference with first non-orthologous sequence - L.major:447 S.stipitis:447

Q4QA33              	100.00%		A3LWA8              	100.00%
Bootstrap support for Q4QA33 as seed ortholog is 100%.
Bootstrap support for A3LWA8 as seed ortholog is 100%.

Group of orthologs #141. Best score 445 bits
Score difference with first non-orthologous sequence - L.major:445 S.stipitis:445

Q4QFK2              	100.00%		A3LY87              	100.00%
Q4Q828              	19.54%		A3LRJ3              	25.00%
Bootstrap support for Q4QFK2 as seed ortholog is 100%.
Bootstrap support for A3LY87 as seed ortholog is 100%.

Group of orthologs #142. Best score 444 bits
Score difference with first non-orthologous sequence - L.major:444 S.stipitis:444

E9AEI0              	100.00%		A3LUJ3              	100.00%
E9AEH9              	73.94%		
Bootstrap support for E9AEI0 as seed ortholog is 100%.
Bootstrap support for A3LUJ3 as seed ortholog is 100%.

Group of orthologs #143. Best score 442 bits
Score difference with first non-orthologous sequence - L.major:98 S.stipitis:43

E9ACG3              	100.00%		A3GFD8              	100.00%
Bootstrap support for E9ACG3 as seed ortholog is 97%.
Bootstrap support for A3GFD8 as seed ortholog is 83%.

Group of orthologs #144. Best score 442 bits
Score difference with first non-orthologous sequence - L.major:146 S.stipitis:442

Q4Q1E9              	100.00%		A3GFA4              	100.00%
Bootstrap support for Q4Q1E9 as seed ortholog is 99%.
Bootstrap support for A3GFA4 as seed ortholog is 100%.

Group of orthologs #145. Best score 442 bits
Score difference with first non-orthologous sequence - L.major:442 S.stipitis:395

Q4QF36              	100.00%		A3LWA5              	100.00%
Bootstrap support for Q4QF36 as seed ortholog is 100%.
Bootstrap support for A3LWA5 as seed ortholog is 100%.

Group of orthologs #146. Best score 440 bits
Score difference with first non-orthologous sequence - L.major:440 S.stipitis:440

Q4Q2Q6              	100.00%		A3LU50              	100.00%
Bootstrap support for Q4Q2Q6 as seed ortholog is 100%.
Bootstrap support for A3LU50 as seed ortholog is 100%.

Group of orthologs #147. Best score 438 bits
Score difference with first non-orthologous sequence - L.major:438 S.stipitis:438

Q4Q2K0              	100.00%		A3LUX2              	100.00%
Bootstrap support for Q4Q2K0 as seed ortholog is 100%.
Bootstrap support for A3LUX2 as seed ortholog is 100%.

Group of orthologs #148. Best score 437 bits
Score difference with first non-orthologous sequence - L.major:437 S.stipitis:437

Q4Q8L7              	100.00%		A3GHA0              	100.00%
Bootstrap support for Q4Q8L7 as seed ortholog is 100%.
Bootstrap support for A3GHA0 as seed ortholog is 100%.

Group of orthologs #149. Best score 436 bits
Score difference with first non-orthologous sequence - L.major:436 S.stipitis:436

Q4Q4W3              	100.00%		A3LRL2              	100.00%
Bootstrap support for Q4Q4W3 as seed ortholog is 100%.
Bootstrap support for A3LRL2 as seed ortholog is 100%.

Group of orthologs #150. Best score 435 bits
Score difference with first non-orthologous sequence - L.major:241 S.stipitis:164

Q4Q8B2              	100.00%		A3GFV3              	100.00%
Bootstrap support for Q4Q8B2 as seed ortholog is 100%.
Bootstrap support for A3GFV3 as seed ortholog is 100%.

Group of orthologs #151. Best score 435 bits
Score difference with first non-orthologous sequence - L.major:146 S.stipitis:111

Q9NHE1              	100.00%		A3LT94              	100.00%
Bootstrap support for Q9NHE1 as seed ortholog is 99%.
Bootstrap support for A3LT94 as seed ortholog is 99%.

Group of orthologs #152. Best score 434 bits
Score difference with first non-orthologous sequence - L.major:434 S.stipitis:434

Q4Q7X1              	100.00%		A3LS93              	100.00%
Bootstrap support for Q4Q7X1 as seed ortholog is 100%.
Bootstrap support for A3LS93 as seed ortholog is 100%.

Group of orthologs #153. Best score 433 bits
Score difference with first non-orthologous sequence - L.major:205 S.stipitis:199

Q4QGW5              	100.00%		A3LU23              	100.00%
Bootstrap support for Q4QGW5 as seed ortholog is 99%.
Bootstrap support for A3LU23 as seed ortholog is 99%.

Group of orthologs #154. Best score 431 bits
Score difference with first non-orthologous sequence - L.major:79 S.stipitis:431

Q4Q6J3              	100.00%		A3LNZ1              	100.00%
                    	       		A3LMU7              	27.67%
Bootstrap support for Q4Q6J3 as seed ortholog is 95%.
Bootstrap support for A3LNZ1 as seed ortholog is 100%.

Group of orthologs #155. Best score 430 bits
Score difference with first non-orthologous sequence - L.major:82 S.stipitis:311

Q4Q7R2              	100.00%		A3LQU4              	100.00%
Bootstrap support for Q4Q7R2 as seed ortholog is 96%.
Bootstrap support for A3LQU4 as seed ortholog is 100%.

Group of orthologs #156. Best score 428 bits
Score difference with first non-orthologous sequence - L.major:250 S.stipitis:240

Q4QDN7              	100.00%		A3LP36              	100.00%
Q4QDN8              	100.00%		
Bootstrap support for Q4QDN7 as seed ortholog is 100%.
Bootstrap support for Q4QDN8 as seed ortholog is 100%.
Bootstrap support for A3LP36 as seed ortholog is 100%.

Group of orthologs #157. Best score 428 bits
Score difference with first non-orthologous sequence - L.major:34 S.stipitis:428

Q4Q3V3              	100.00%		A3LYE2              	100.00%
Bootstrap support for Q4Q3V3 as seed ortholog is 78%.
Bootstrap support for A3LYE2 as seed ortholog is 100%.

Group of orthologs #158. Best score 428 bits
Score difference with first non-orthologous sequence - L.major:260 S.stipitis:354

Q4QJG2              	100.00%		A3LU44              	100.00%
Bootstrap support for Q4QJG2 as seed ortholog is 100%.
Bootstrap support for A3LU44 as seed ortholog is 100%.

Group of orthologs #159. Best score 426 bits
Score difference with first non-orthologous sequence - L.major:308 S.stipitis:311

Q4QIG8              	100.00%		A3LUE4              	100.00%
Bootstrap support for Q4QIG8 as seed ortholog is 100%.
Bootstrap support for A3LUE4 as seed ortholog is 100%.

Group of orthologs #160. Best score 426 bits
Score difference with first non-orthologous sequence - L.major:132 S.stipitis:95

Q95Z93              	100.00%		A3M0L3              	100.00%
Bootstrap support for Q95Z93 as seed ortholog is 98%.
Bootstrap support for A3M0L3 as seed ortholog is 91%.

Group of orthologs #161. Best score 422 bits
Score difference with first non-orthologous sequence - L.major:422 S.stipitis:422

E9ADI5              	100.00%		A3LNC1              	100.00%
Q4QBL8              	82.02%		
Bootstrap support for E9ADI5 as seed ortholog is 100%.
Bootstrap support for A3LNC1 as seed ortholog is 100%.

Group of orthologs #162. Best score 422 bits
Score difference with first non-orthologous sequence - L.major:422 S.stipitis:422

Q4Q6P5              	100.00%		A3M089              	100.00%
Bootstrap support for Q4Q6P5 as seed ortholog is 100%.
Bootstrap support for A3M089 as seed ortholog is 100%.

Group of orthologs #163. Best score 421 bits
Score difference with first non-orthologous sequence - L.major:142 S.stipitis:192

Q4QIK9              	100.00%		A3GI52              	100.00%
Bootstrap support for Q4QIK9 as seed ortholog is 99%.
Bootstrap support for A3GI52 as seed ortholog is 99%.

Group of orthologs #164. Best score 420 bits
Score difference with first non-orthologous sequence - L.major:420 S.stipitis:420

Q4Q2K1              	100.00%		A3LW19              	100.00%
Bootstrap support for Q4Q2K1 as seed ortholog is 100%.
Bootstrap support for A3LW19 as seed ortholog is 100%.

Group of orthologs #165. Best score 419 bits
Score difference with first non-orthologous sequence - L.major:234 S.stipitis:419

Q4Q9R8              	100.00%		A3LYM2              	100.00%
Bootstrap support for Q4Q9R8 as seed ortholog is 100%.
Bootstrap support for A3LYM2 as seed ortholog is 100%.

Group of orthologs #166. Best score 418 bits
Score difference with first non-orthologous sequence - L.major:418 S.stipitis:341

Q4Q6Q4              	100.00%		A3LS68              	100.00%
Bootstrap support for Q4Q6Q4 as seed ortholog is 100%.
Bootstrap support for A3LS68 as seed ortholog is 100%.

Group of orthologs #167. Best score 416 bits
Score difference with first non-orthologous sequence - L.major:195 S.stipitis:416

E9AFH5              	100.00%		A3M0D4              	100.00%
Bootstrap support for E9AFH5 as seed ortholog is 99%.
Bootstrap support for A3M0D4 as seed ortholog is 100%.

Group of orthologs #168. Best score 415 bits
Score difference with first non-orthologous sequence - L.major:161 S.stipitis:217

Q4Q8T8              	100.00%		A3LX73              	100.00%
Bootstrap support for Q4Q8T8 as seed ortholog is 99%.
Bootstrap support for A3LX73 as seed ortholog is 100%.

Group of orthologs #169. Best score 414 bits
Score difference with first non-orthologous sequence - L.major:114 S.stipitis:285

E9AEZ4              	100.00%		A3GID5              	100.00%
Bootstrap support for E9AEZ4 as seed ortholog is 99%.
Bootstrap support for A3GID5 as seed ortholog is 100%.

Group of orthologs #170. Best score 414 bits
Score difference with first non-orthologous sequence - L.major:229 S.stipitis:414

Q4QI01              	100.00%		A3GHX5              	100.00%
Bootstrap support for Q4QI01 as seed ortholog is 99%.
Bootstrap support for A3GHX5 as seed ortholog is 100%.

Group of orthologs #171. Best score 413 bits
Score difference with first non-orthologous sequence - L.major:79 S.stipitis:413

Q4QJC7              	100.00%		A3LT99              	100.00%
Bootstrap support for Q4QJC7 as seed ortholog is 95%.
Bootstrap support for A3LT99 as seed ortholog is 100%.

Group of orthologs #172. Best score 412 bits
Score difference with first non-orthologous sequence - L.major:412 S.stipitis:412

Q4QHJ7              	100.00%		A3GGX7              	100.00%
Bootstrap support for Q4QHJ7 as seed ortholog is 100%.
Bootstrap support for A3GGX7 as seed ortholog is 100%.

Group of orthologs #173. Best score 409 bits
Score difference with first non-orthologous sequence - L.major:409 S.stipitis:409

Q4QFP9              	100.00%		A3LSJ3              	100.00%
Bootstrap support for Q4QFP9 as seed ortholog is 100%.
Bootstrap support for A3LSJ3 as seed ortholog is 100%.

Group of orthologs #174. Best score 406 bits
Score difference with first non-orthologous sequence - L.major:406 S.stipitis:300

E9AE78              	100.00%		A3LWP1              	100.00%
Bootstrap support for E9AE78 as seed ortholog is 100%.
Bootstrap support for A3LWP1 as seed ortholog is 100%.

Group of orthologs #175. Best score 404 bits
Score difference with first non-orthologous sequence - L.major:404 S.stipitis:142

E9AE98              	100.00%		A3LQF5              	100.00%
Bootstrap support for E9AE98 as seed ortholog is 100%.
Bootstrap support for A3LQF5 as seed ortholog is 99%.

Group of orthologs #176. Best score 403 bits
Score difference with first non-orthologous sequence - L.major:403 S.stipitis:403

Q4Q4N5              	100.00%		A3GI45              	100.00%
Bootstrap support for Q4Q4N5 as seed ortholog is 100%.
Bootstrap support for A3GI45 as seed ortholog is 100%.

Group of orthologs #177. Best score 403 bits
Score difference with first non-orthologous sequence - L.major:260 S.stipitis:403

Q4Q2W6              	100.00%		A3LY69              	100.00%
Bootstrap support for Q4Q2W6 as seed ortholog is 100%.
Bootstrap support for A3LY69 as seed ortholog is 100%.

Group of orthologs #178. Best score 403 bits
Score difference with first non-orthologous sequence - L.major:403 S.stipitis:307

Q4QAR0              	100.00%		A3LXN7              	100.00%
Bootstrap support for Q4QAR0 as seed ortholog is 100%.
Bootstrap support for A3LXN7 as seed ortholog is 100%.

Group of orthologs #179. Best score 401 bits
Score difference with first non-orthologous sequence - L.major:401 S.stipitis:401

Q4QDB1              	100.00%		A3LV88              	100.00%
Bootstrap support for Q4QDB1 as seed ortholog is 100%.
Bootstrap support for A3LV88 as seed ortholog is 100%.

Group of orthologs #180. Best score 400 bits
Score difference with first non-orthologous sequence - L.major:246 S.stipitis:234

Q4QC38              	100.00%		A3LST5              	100.00%
Bootstrap support for Q4QC38 as seed ortholog is 100%.
Bootstrap support for A3LST5 as seed ortholog is 100%.

Group of orthologs #181. Best score 398 bits
Score difference with first non-orthologous sequence - L.major:398 S.stipitis:398

E9AC78              	100.00%		A3LMX4              	100.00%
Q4Q9J5              	79.42%		
Bootstrap support for E9AC78 as seed ortholog is 100%.
Bootstrap support for A3LMX4 as seed ortholog is 100%.

Group of orthologs #182. Best score 398 bits
Score difference with first non-orthologous sequence - L.major:398 S.stipitis:398

E9AG04              	100.00%		A3LNR3              	100.00%
Bootstrap support for E9AG04 as seed ortholog is 100%.
Bootstrap support for A3LNR3 as seed ortholog is 100%.

Group of orthologs #183. Best score 397 bits
Score difference with first non-orthologous sequence - L.major:397 S.stipitis:397

Q4QH39              	100.00%		A3LXF0              	100.00%
Bootstrap support for Q4QH39 as seed ortholog is 100%.
Bootstrap support for A3LXF0 as seed ortholog is 100%.

Group of orthologs #184. Best score 394 bits
Score difference with first non-orthologous sequence - L.major:6 S.stipitis:100

Q4Q4W8              	100.00%		A3M0C2              	100.00%
Bootstrap support for Q4Q4W8 as seed ortholog is 57%.
Alternative seed ortholog is Q4Q7Z5 (6 bits away from this cluster)
Bootstrap support for A3M0C2 as seed ortholog is 99%.

Group of orthologs #185. Best score 392 bits
Score difference with first non-orthologous sequence - L.major:224 S.stipitis:264

Q4QJF6              	100.00%		A3LRJ9              	100.00%
Bootstrap support for Q4QJF6 as seed ortholog is 100%.
Bootstrap support for A3LRJ9 as seed ortholog is 100%.

Group of orthologs #186. Best score 391 bits
Score difference with first non-orthologous sequence - L.major:391 S.stipitis:3

E9ABZ4              	100.00%		A3LYM8              	100.00%
Bootstrap support for E9ABZ4 as seed ortholog is 100%.
Bootstrap support for A3LYM8 as seed ortholog is 47%.
Alternative seed ortholog is A3GG31 (3 bits away from this cluster)

Group of orthologs #187. Best score 389 bits
Score difference with first non-orthologous sequence - L.major:389 S.stipitis:389

Q4QJ13              	100.00%		A3LTI6              	100.00%
Bootstrap support for Q4QJ13 as seed ortholog is 100%.
Bootstrap support for A3LTI6 as seed ortholog is 100%.

Group of orthologs #188. Best score 388 bits
Score difference with first non-orthologous sequence - L.major:388 S.stipitis:388

E9ACF1              	100.00%		A3LPQ2              	100.00%
Bootstrap support for E9ACF1 as seed ortholog is 100%.
Bootstrap support for A3LPQ2 as seed ortholog is 100%.

Group of orthologs #189. Best score 388 bits
Score difference with first non-orthologous sequence - L.major:388 S.stipitis:388

Q4Q9M4              	100.00%		A3GFF3              	100.00%
Bootstrap support for Q4Q9M4 as seed ortholog is 100%.
Bootstrap support for A3GFF3 as seed ortholog is 100%.

Group of orthologs #190. Best score 387 bits
Score difference with first non-orthologous sequence - L.major:387 S.stipitis:387

Q4Q804              	100.00%		A3LTJ7              	100.00%
Bootstrap support for Q4Q804 as seed ortholog is 100%.
Bootstrap support for A3LTJ7 as seed ortholog is 100%.

Group of orthologs #191. Best score 386 bits
Score difference with first non-orthologous sequence - L.major:106 S.stipitis:223

Q4Q9G1              	100.00%		A3LXA5              	100.00%
                    	       		A3LUJ6              	19.72%
                    	       		A3LTZ6              	10.78%
Bootstrap support for Q4Q9G1 as seed ortholog is 96%.
Bootstrap support for A3LXA5 as seed ortholog is 99%.

Group of orthologs #192. Best score 386 bits
Score difference with first non-orthologous sequence - L.major:386 S.stipitis:270

Q4QBG5              	100.00%		A3GET1              	100.00%
Bootstrap support for Q4QBG5 as seed ortholog is 100%.
Bootstrap support for A3GET1 as seed ortholog is 100%.

Group of orthologs #193. Best score 384 bits
Score difference with first non-orthologous sequence - L.major:384 S.stipitis:302

Q4QDW8              	100.00%		A3LX50              	100.00%
Bootstrap support for Q4QDW8 as seed ortholog is 100%.
Bootstrap support for A3LX50 as seed ortholog is 100%.

Group of orthologs #194. Best score 383 bits
Score difference with first non-orthologous sequence - L.major:383 S.stipitis:142

Q4Q3X8              	100.00%		A3LVL5              	100.00%
Bootstrap support for Q4Q3X8 as seed ortholog is 100%.
Bootstrap support for A3LVL5 as seed ortholog is 96%.

Group of orthologs #195. Best score 381 bits
Score difference with first non-orthologous sequence - L.major:237 S.stipitis:279

Q4QAA4              	100.00%		A3LYL8              	100.00%
Bootstrap support for Q4QAA4 as seed ortholog is 100%.
Bootstrap support for A3LYL8 as seed ortholog is 100%.

Group of orthologs #196. Best score 379 bits
Score difference with first non-orthologous sequence - L.major:305 S.stipitis:379

Q4QJF1              	100.00%		A3GGR8              	100.00%
Bootstrap support for Q4QJF1 as seed ortholog is 100%.
Bootstrap support for A3GGR8 as seed ortholog is 100%.

Group of orthologs #197. Best score 378 bits
Score difference with first non-orthologous sequence - L.major:121 S.stipitis:378

E9ADK8              	100.00%		A3GHY8              	100.00%
Bootstrap support for E9ADK8 as seed ortholog is 99%.
Bootstrap support for A3GHY8 as seed ortholog is 100%.

Group of orthologs #198. Best score 376 bits
Score difference with first non-orthologous sequence - L.major:18 S.stipitis:376

E9ADR1              	100.00%		A3LQY8              	100.00%
Bootstrap support for E9ADR1 as seed ortholog is 83%.
Bootstrap support for A3LQY8 as seed ortholog is 100%.

Group of orthologs #199. Best score 374 bits
Score difference with first non-orthologous sequence - L.major:374 S.stipitis:374

Q4Q420              	100.00%		A3M0A1              	100.00%
Bootstrap support for Q4Q420 as seed ortholog is 100%.
Bootstrap support for A3M0A1 as seed ortholog is 100%.

Group of orthologs #200. Best score 373 bits
Score difference with first non-orthologous sequence - L.major:19 S.stipitis:121

Q4Q2C2              	100.00%		A3LXC5              	100.00%
Bootstrap support for Q4Q2C2 as seed ortholog is 72%.
Alternative seed ortholog is Q4Q7Z5 (19 bits away from this cluster)
Bootstrap support for A3LXC5 as seed ortholog is 99%.

Group of orthologs #201. Best score 371 bits
Score difference with first non-orthologous sequence - L.major:371 S.stipitis:371

Q4Q871              	100.00%		A3GFF8              	100.00%
Bootstrap support for Q4Q871 as seed ortholog is 100%.
Bootstrap support for A3GFF8 as seed ortholog is 100%.

Group of orthologs #202. Best score 370 bits
Score difference with first non-orthologous sequence - L.major:181 S.stipitis:125

E9AC07              	100.00%		A3GHK6              	100.00%
Bootstrap support for E9AC07 as seed ortholog is 99%.
Bootstrap support for A3GHK6 as seed ortholog is 99%.

Group of orthologs #203. Best score 369 bits
Score difference with first non-orthologous sequence - L.major:199 S.stipitis:155

Q4Q1P8              	100.00%		A3LRD1              	100.00%
                    	       		A3LPT8              	20.89%
Bootstrap support for Q4Q1P8 as seed ortholog is 100%.
Bootstrap support for A3LRD1 as seed ortholog is 99%.

Group of orthologs #204. Best score 368 bits
Score difference with first non-orthologous sequence - L.major:368 S.stipitis:241

E9AEK9              	100.00%		A3LWQ1              	100.00%
Bootstrap support for E9AEK9 as seed ortholog is 100%.
Bootstrap support for A3LWQ1 as seed ortholog is 100%.

Group of orthologs #205. Best score 368 bits
Score difference with first non-orthologous sequence - L.major:238 S.stipitis:368

Q4Q3F0              	100.00%		A3LW22              	100.00%
Bootstrap support for Q4Q3F0 as seed ortholog is 99%.
Bootstrap support for A3LW22 as seed ortholog is 100%.

Group of orthologs #206. Best score 368 bits
Score difference with first non-orthologous sequence - L.major:221 S.stipitis:240

Q4Q2Z6              	100.00%		A3LZT3              	100.00%
Bootstrap support for Q4Q2Z6 as seed ortholog is 99%.
Bootstrap support for A3LZT3 as seed ortholog is 99%.

Group of orthologs #207. Best score 364 bits
Score difference with first non-orthologous sequence - L.major:364 S.stipitis:168

Q4QIG1              	100.00%		A3LQ55              	100.00%
Bootstrap support for Q4QIG1 as seed ortholog is 100%.
Bootstrap support for A3LQ55 as seed ortholog is 99%.

Group of orthologs #208. Best score 363 bits
Score difference with first non-orthologous sequence - L.major:363 S.stipitis:363

E9AEX1              	100.00%		A3LVR6              	100.00%
Bootstrap support for E9AEX1 as seed ortholog is 100%.
Bootstrap support for A3LVR6 as seed ortholog is 100%.

Group of orthologs #209. Best score 363 bits
Score difference with first non-orthologous sequence - L.major:363 S.stipitis:363

Q4QCC5              	100.00%		A3LTA9              	100.00%
Bootstrap support for Q4QCC5 as seed ortholog is 100%.
Bootstrap support for A3LTA9 as seed ortholog is 100%.

Group of orthologs #210. Best score 362 bits
Score difference with first non-orthologous sequence - L.major:246 S.stipitis:275

Q4QDK0              	100.00%		A3LUG5              	100.00%
                    	       		A3LZD4              	72.34%
Bootstrap support for Q4QDK0 as seed ortholog is 100%.
Bootstrap support for A3LUG5 as seed ortholog is 100%.

Group of orthologs #211. Best score 359 bits
Score difference with first non-orthologous sequence - L.major:359 S.stipitis:309

Q4Q5J5              	100.00%		A3LRA4              	100.00%
Bootstrap support for Q4Q5J5 as seed ortholog is 100%.
Bootstrap support for A3LRA4 as seed ortholog is 100%.

Group of orthologs #212. Best score 358 bits
Score difference with first non-orthologous sequence - L.major:358 S.stipitis:358

Q4Q1C4              	100.00%		A3LP98              	100.00%
Bootstrap support for Q4Q1C4 as seed ortholog is 100%.
Bootstrap support for A3LP98 as seed ortholog is 100%.

Group of orthologs #213. Best score 358 bits
Score difference with first non-orthologous sequence - L.major:125 S.stipitis:358

Q4Q8D5              	100.00%		A3GGE9              	100.00%
Bootstrap support for Q4Q8D5 as seed ortholog is 99%.
Bootstrap support for A3GGE9 as seed ortholog is 100%.

Group of orthologs #214. Best score 358 bits
Score difference with first non-orthologous sequence - L.major:168 S.stipitis:183

Q4QEG9              	100.00%		A3LRC4              	100.00%
Bootstrap support for Q4QEG9 as seed ortholog is 100%.
Bootstrap support for A3LRC4 as seed ortholog is 100%.

Group of orthologs #215. Best score 357 bits
Score difference with first non-orthologous sequence - L.major:357 S.stipitis:357

Q4Q997              	100.00%		A3LPA2              	100.00%
Bootstrap support for Q4Q997 as seed ortholog is 100%.
Bootstrap support for A3LPA2 as seed ortholog is 100%.

Group of orthologs #216. Best score 356 bits
Score difference with first non-orthologous sequence - L.major:356 S.stipitis:356

E9ADW5              	100.00%		A3GGS9              	100.00%
Bootstrap support for E9ADW5 as seed ortholog is 100%.
Bootstrap support for A3GGS9 as seed ortholog is 100%.

Group of orthologs #217. Best score 356 bits
Score difference with first non-orthologous sequence - L.major:356 S.stipitis:356

Q4Q0E8              	100.00%		A3GGB3              	100.00%
Bootstrap support for Q4Q0E8 as seed ortholog is 100%.
Bootstrap support for A3GGB3 as seed ortholog is 100%.

Group of orthologs #218. Best score 356 bits
Score difference with first non-orthologous sequence - L.major:142 S.stipitis:142

Q4QAQ7              	100.00%		A3LW89              	100.00%
Bootstrap support for Q4QAQ7 as seed ortholog is 99%.
Bootstrap support for A3LW89 as seed ortholog is 99%.

Group of orthologs #219. Best score 356 bits
Score difference with first non-orthologous sequence - L.major:260 S.stipitis:356

Q4QB82              	100.00%		A3LVT5              	100.00%
Bootstrap support for Q4QB82 as seed ortholog is 100%.
Bootstrap support for A3LVT5 as seed ortholog is 100%.

Group of orthologs #220. Best score 355 bits
Score difference with first non-orthologous sequence - L.major:355 S.stipitis:355

Q4QF42              	100.00%		A3LUT0              	100.00%
Bootstrap support for Q4QF42 as seed ortholog is 100%.
Bootstrap support for A3LUT0 as seed ortholog is 100%.

Group of orthologs #221. Best score 354 bits
Score difference with first non-orthologous sequence - L.major:238 S.stipitis:354

Q4Q6Z5              	100.00%		A3LQ70              	100.00%
Q4Q6Z4              	99.46%		A3LZZ7              	66.78%
                    	       		A3LNP7              	62.87%
Bootstrap support for Q4Q6Z5 as seed ortholog is 100%.
Bootstrap support for A3LQ70 as seed ortholog is 100%.

Group of orthologs #222. Best score 354 bits
Score difference with first non-orthologous sequence - L.major:120 S.stipitis:194

Q4Q702              	100.00%		A3LYG4              	100.00%
Bootstrap support for Q4Q702 as seed ortholog is 99%.
Bootstrap support for A3LYG4 as seed ortholog is 100%.

Group of orthologs #223. Best score 352 bits
Score difference with first non-orthologous sequence - L.major:150 S.stipitis:81

Q4Q078              	100.00%		A3LZW0              	100.00%
Bootstrap support for Q4Q078 as seed ortholog is 99%.
Bootstrap support for A3LZW0 as seed ortholog is 93%.

Group of orthologs #224. Best score 352 bits
Score difference with first non-orthologous sequence - L.major:352 S.stipitis:352

Q4FYU7              	100.00%		A3M056              	100.00%
Bootstrap support for Q4FYU7 as seed ortholog is 100%.
Bootstrap support for A3M056 as seed ortholog is 100%.

Group of orthologs #225. Best score 351 bits
Score difference with first non-orthologous sequence - L.major:351 S.stipitis:264

Q4QDV9              	100.00%		A3GH45              	100.00%
Bootstrap support for Q4QDV9 as seed ortholog is 100%.
Bootstrap support for A3GH45 as seed ortholog is 100%.

Group of orthologs #226. Best score 351 bits
Score difference with first non-orthologous sequence - L.major:351 S.stipitis:173

Q4QH70              	100.00%		A3LUE7              	100.00%
Bootstrap support for Q4QH70 as seed ortholog is 100%.
Bootstrap support for A3LUE7 as seed ortholog is 99%.

Group of orthologs #227. Best score 350 bits
Score difference with first non-orthologous sequence - L.major:350 S.stipitis:350

Q4QAQ6              	100.00%		A3LV50              	100.00%
Bootstrap support for Q4QAQ6 as seed ortholog is 100%.
Bootstrap support for A3LV50 as seed ortholog is 100%.

Group of orthologs #228. Best score 347 bits
Score difference with first non-orthologous sequence - L.major:347 S.stipitis:347

Q4QDG7              	100.00%		A3GEY7              	100.00%
Bootstrap support for Q4QDG7 as seed ortholog is 100%.
Bootstrap support for A3GEY7 as seed ortholog is 100%.

Group of orthologs #229. Best score 347 bits
Score difference with first non-orthologous sequence - L.major:42 S.stipitis:347

E9AFX7              	100.00%		A3LXL0              	100.00%
Bootstrap support for E9AFX7 as seed ortholog is 68%.
Alternative seed ortholog is Q4QA88 (42 bits away from this cluster)
Bootstrap support for A3LXL0 as seed ortholog is 100%.

Group of orthologs #230. Best score 344 bits
Score difference with first non-orthologous sequence - L.major:344 S.stipitis:344

P07382              	100.00%		A3GG41              	100.00%
Bootstrap support for P07382 as seed ortholog is 100%.
Bootstrap support for A3GG41 as seed ortholog is 100%.

Group of orthologs #231. Best score 344 bits
Score difference with first non-orthologous sequence - L.major:203 S.stipitis:250

Q4Q6T0              	100.00%		A3GFR9              	100.00%
Bootstrap support for Q4Q6T0 as seed ortholog is 100%.
Bootstrap support for A3GFR9 as seed ortholog is 100%.

Group of orthologs #232. Best score 344 bits
Score difference with first non-orthologous sequence - L.major:344 S.stipitis:344

Q4QIT4              	100.00%		A3LQ15              	100.00%
Bootstrap support for Q4QIT4 as seed ortholog is 100%.
Bootstrap support for A3LQ15 as seed ortholog is 100%.

Group of orthologs #233. Best score 340 bits
Score difference with first non-orthologous sequence - L.major:152 S.stipitis:340

E9ACV1              	100.00%		A3GG17              	100.00%
                    	       		A3M0J8              	5.82%
Bootstrap support for E9ACV1 as seed ortholog is 99%.
Bootstrap support for A3GG17 as seed ortholog is 100%.

Group of orthologs #234. Best score 340 bits
Score difference with first non-orthologous sequence - L.major:125 S.stipitis:156

Q4Q1N9              	100.00%		A3LS22              	100.00%
Bootstrap support for Q4Q1N9 as seed ortholog is 99%.
Bootstrap support for A3LS22 as seed ortholog is 99%.

Group of orthologs #235. Best score 340 bits
Score difference with first non-orthologous sequence - L.major:41 S.stipitis:340

Q4QDL1              	100.00%		A3GEZ8              	100.00%
Bootstrap support for Q4QDL1 as seed ortholog is 76%.
Bootstrap support for A3GEZ8 as seed ortholog is 100%.

Group of orthologs #236. Best score 339 bits
Score difference with first non-orthologous sequence - L.major:339 S.stipitis:339

E9AE39              	100.00%		A3LT38              	100.00%
Bootstrap support for E9AE39 as seed ortholog is 100%.
Bootstrap support for A3LT38 as seed ortholog is 100%.

Group of orthologs #237. Best score 339 bits
Score difference with first non-orthologous sequence - L.major:247 S.stipitis:268

Q4Q7J1              	100.00%		A3LWL5              	100.00%
Bootstrap support for Q4Q7J1 as seed ortholog is 100%.
Bootstrap support for A3LWL5 as seed ortholog is 100%.

Group of orthologs #238. Best score 338 bits
Score difference with first non-orthologous sequence - L.major:338 S.stipitis:168

Q4Q1M8              	100.00%		A3GHU7              	100.00%
Bootstrap support for Q4Q1M8 as seed ortholog is 100%.
Bootstrap support for A3GHU7 as seed ortholog is 99%.

Group of orthologs #239. Best score 336 bits
Score difference with first non-orthologous sequence - L.major:53 S.stipitis:38

Q4Q3J4              	100.00%		A3GGD9              	100.00%
Q4Q3J2              	41.11%		
Bootstrap support for Q4Q3J4 as seed ortholog is 95%.
Bootstrap support for A3GGD9 as seed ortholog is 87%.

Group of orthologs #240. Best score 336 bits
Score difference with first non-orthologous sequence - L.major:144 S.stipitis:177

Q4Q937              	100.00%		A3GFY2              	100.00%
                    	       		A3GF02              	32.83%
Bootstrap support for Q4Q937 as seed ortholog is 99%.
Bootstrap support for A3GFY2 as seed ortholog is 99%.

Group of orthologs #241. Best score 336 bits
Score difference with first non-orthologous sequence - L.major:118 S.stipitis:110

Q4QBN3              	100.00%		A3LQP0              	100.00%
Bootstrap support for Q4QBN3 as seed ortholog is 99%.
Bootstrap support for A3LQP0 as seed ortholog is 99%.

Group of orthologs #242. Best score 334 bits
Score difference with first non-orthologous sequence - L.major:237 S.stipitis:127

Q4Q3A6              	100.00%		A3LQ34              	100.00%
Q4Q8S4              	34.05%		
Bootstrap support for Q4Q3A6 as seed ortholog is 99%.
Bootstrap support for A3LQ34 as seed ortholog is 97%.

Group of orthologs #243. Best score 334 bits
Score difference with first non-orthologous sequence - L.major:334 S.stipitis:334

Q4Q800              	100.00%		A3GG22              	100.00%
Bootstrap support for Q4Q800 as seed ortholog is 100%.
Bootstrap support for A3GG22 as seed ortholog is 100%.

Group of orthologs #244. Best score 334 bits
Score difference with first non-orthologous sequence - L.major:68 S.stipitis:114

O96526              	100.00%		A3LXZ6              	100.00%
Bootstrap support for O96526 as seed ortholog is 98%.
Bootstrap support for A3LXZ6 as seed ortholog is 99%.

Group of orthologs #245. Best score 334 bits
Score difference with first non-orthologous sequence - L.major:334 S.stipitis:334

Q4Q4V8              	100.00%		A3LZI8              	100.00%
Bootstrap support for Q4Q4V8 as seed ortholog is 100%.
Bootstrap support for A3LZI8 as seed ortholog is 100%.

Group of orthologs #246. Best score 333 bits
Score difference with first non-orthologous sequence - L.major:333 S.stipitis:333

E9AET7              	100.00%		A3LRN4              	100.00%
E9AET6              	72.08%		
E9AET9              	65.57%		
E9AET8              	41.83%		
Bootstrap support for E9AET7 as seed ortholog is 100%.
Bootstrap support for A3LRN4 as seed ortholog is 100%.

Group of orthologs #247. Best score 333 bits
Score difference with first non-orthologous sequence - L.major:278 S.stipitis:333

Q4Q199              	100.00%		A3GHH1              	100.00%
Bootstrap support for Q4Q199 as seed ortholog is 100%.
Bootstrap support for A3GHH1 as seed ortholog is 100%.

Group of orthologs #248. Best score 333 bits
Score difference with first non-orthologous sequence - L.major:173 S.stipitis:333

Q4Q822              	100.00%		A3LYY4              	100.00%
Bootstrap support for Q4Q822 as seed ortholog is 99%.
Bootstrap support for A3LYY4 as seed ortholog is 100%.

Group of orthologs #249. Best score 332 bits
Score difference with first non-orthologous sequence - L.major:332 S.stipitis:332

Q4QDI6              	100.00%		A3GGJ5              	100.00%
Bootstrap support for Q4QDI6 as seed ortholog is 100%.
Bootstrap support for A3GGJ5 as seed ortholog is 100%.

Group of orthologs #250. Best score 332 bits
Score difference with first non-orthologous sequence - L.major:255 S.stipitis:261

E9AFD2              	100.00%		A3M042              	100.00%
Bootstrap support for E9AFD2 as seed ortholog is 100%.
Bootstrap support for A3M042 as seed ortholog is 100%.

Group of orthologs #251. Best score 331 bits
Score difference with first non-orthologous sequence - L.major:129 S.stipitis:121

Q27687              	100.00%		A3LYD5              	100.00%
Q9GNR4              	100.00%		A3LPK9              	46.06%
E9AFM1              	78.10%		
Bootstrap support for Q27687 as seed ortholog is 99%.
Bootstrap support for Q9GNR4 as seed ortholog is 99%.
Bootstrap support for A3LYD5 as seed ortholog is 99%.

Group of orthologs #252. Best score 329 bits
Score difference with first non-orthologous sequence - L.major:329 S.stipitis:163

Q4QAA5              	100.00%		A3LQC4              	100.00%
Q4QFT4              	16.02%		
Bootstrap support for Q4QAA5 as seed ortholog is 100%.
Bootstrap support for A3LQC4 as seed ortholog is 99%.

Group of orthologs #253. Best score 329 bits
Score difference with first non-orthologous sequence - L.major:329 S.stipitis:329

Q4Q4D7              	100.00%		A3LP39              	100.00%
Bootstrap support for Q4Q4D7 as seed ortholog is 100%.
Bootstrap support for A3LP39 as seed ortholog is 100%.

Group of orthologs #254. Best score 329 bits
Score difference with first non-orthologous sequence - L.major:329 S.stipitis:329

Q4QCE9              	100.00%		A3GF66              	100.00%
Bootstrap support for Q4QCE9 as seed ortholog is 100%.
Bootstrap support for A3GF66 as seed ortholog is 100%.

Group of orthologs #255. Best score 328 bits
Score difference with first non-orthologous sequence - L.major:61 S.stipitis:127

Q4QDQ2              	100.00%		A3GFS0              	100.00%
Bootstrap support for Q4QDQ2 as seed ortholog is 83%.
Bootstrap support for A3GFS0 as seed ortholog is 99%.

Group of orthologs #256. Best score 328 bits
Score difference with first non-orthologous sequence - L.major:328 S.stipitis:215

Q4QCD2              	100.00%		A3LNS6              	100.00%
Bootstrap support for Q4QCD2 as seed ortholog is 100%.
Bootstrap support for A3LNS6 as seed ortholog is 99%.

Group of orthologs #257. Best score 327 bits
Score difference with first non-orthologous sequence - L.major:327 S.stipitis:327

E9AD32              	100.00%		A3GID9              	100.00%
Bootstrap support for E9AD32 as seed ortholog is 100%.
Bootstrap support for A3GID9 as seed ortholog is 100%.

Group of orthologs #258. Best score 327 bits
Score difference with first non-orthologous sequence - L.major:137 S.stipitis:140

Q4QJG6              	100.00%		A3LP87              	100.00%
Bootstrap support for Q4QJG6 as seed ortholog is 99%.
Bootstrap support for A3LP87 as seed ortholog is 99%.

Group of orthologs #259. Best score 326 bits
Score difference with first non-orthologous sequence - L.major:193 S.stipitis:153

Q4Q4J6              	100.00%		A3LZN1              	100.00%
Bootstrap support for Q4Q4J6 as seed ortholog is 100%.
Bootstrap support for A3LZN1 as seed ortholog is 99%.

Group of orthologs #260. Best score 326 bits
Score difference with first non-orthologous sequence - L.major:72 S.stipitis:112

Q4QC88              	100.00%		A3LXB7              	100.00%
Bootstrap support for Q4QC88 as seed ortholog is 98%.
Bootstrap support for A3LXB7 as seed ortholog is 99%.

Group of orthologs #261. Best score 326 bits
Score difference with first non-orthologous sequence - L.major:326 S.stipitis:326

Q4QEU3              	100.00%		A3M0D0              	100.00%
Bootstrap support for Q4QEU3 as seed ortholog is 100%.
Bootstrap support for A3M0D0 as seed ortholog is 100%.

Group of orthologs #262. Best score 325 bits
Score difference with first non-orthologous sequence - L.major:325 S.stipitis:246

Q4Q758              	100.00%		A3LPY6              	100.00%
Bootstrap support for Q4Q758 as seed ortholog is 100%.
Bootstrap support for A3LPY6 as seed ortholog is 100%.

Group of orthologs #263. Best score 324 bits
Score difference with first non-orthologous sequence - L.major:166 S.stipitis:324

Q4Q1F5              	100.00%		A3LSC7              	100.00%
Bootstrap support for Q4Q1F5 as seed ortholog is 99%.
Bootstrap support for A3LSC7 as seed ortholog is 100%.

Group of orthologs #264. Best score 324 bits
Score difference with first non-orthologous sequence - L.major:324 S.stipitis:324

Q4Q2G5              	100.00%		A3LZK5              	100.00%
Bootstrap support for Q4Q2G5 as seed ortholog is 100%.
Bootstrap support for A3LZK5 as seed ortholog is 100%.

Group of orthologs #265. Best score 323 bits
Score difference with first non-orthologous sequence - L.major:12 S.stipitis:98

Q4Q7S3              	100.00%		A3GGG1              	100.00%
Bootstrap support for Q4Q7S3 as seed ortholog is 62%.
Alternative seed ortholog is E9AE21 (12 bits away from this cluster)
Bootstrap support for A3GGG1 as seed ortholog is 97%.

Group of orthologs #266. Best score 322 bits
Score difference with first non-orthologous sequence - L.major:322 S.stipitis:322

Q4QA42              	100.00%		A3LRF7              	100.00%
Bootstrap support for Q4QA42 as seed ortholog is 100%.
Bootstrap support for A3LRF7 as seed ortholog is 100%.

Group of orthologs #267. Best score 322 bits
Score difference with first non-orthologous sequence - L.major:322 S.stipitis:322

Q4QBY8              	100.00%		A3LR29              	100.00%
Bootstrap support for Q4QBY8 as seed ortholog is 100%.
Bootstrap support for A3LR29 as seed ortholog is 100%.

Group of orthologs #268. Best score 322 bits
Score difference with first non-orthologous sequence - L.major:157 S.stipitis:322

Q4QJI3              	100.00%		A3LTA3              	100.00%
Bootstrap support for Q4QJI3 as seed ortholog is 99%.
Bootstrap support for A3LTA3 as seed ortholog is 100%.

Group of orthologs #269. Best score 321 bits
Score difference with first non-orthologous sequence - L.major:224 S.stipitis:321

Q4QDQ1              	100.00%		A3GEX9              	100.00%
Bootstrap support for Q4QDQ1 as seed ortholog is 100%.
Bootstrap support for A3GEX9 as seed ortholog is 100%.

Group of orthologs #270. Best score 320 bits
Score difference with first non-orthologous sequence - L.major:320 S.stipitis:320

Q4FWX5              	100.00%		A3GFN6              	100.00%
Bootstrap support for Q4FWX5 as seed ortholog is 100%.
Bootstrap support for A3GFN6 as seed ortholog is 100%.

Group of orthologs #271. Best score 317 bits
Score difference with first non-orthologous sequence - L.major:317 S.stipitis:317

Q4QD33              	100.00%		A3LUY2              	100.00%
Q4QD34              	100.00%		
Q4Q6V1              	6.36%		
Bootstrap support for Q4QD33 as seed ortholog is 100%.
Bootstrap support for Q4QD34 as seed ortholog is 100%.
Bootstrap support for A3LUY2 as seed ortholog is 100%.

Group of orthologs #272. Best score 316 bits
Score difference with first non-orthologous sequence - L.major:316 S.stipitis:316

Q4Q5S8              	100.00%		A3GGB7              	100.00%
Bootstrap support for Q4Q5S8 as seed ortholog is 100%.
Bootstrap support for A3GGB7 as seed ortholog is 100%.

Group of orthologs #273. Best score 316 bits
Score difference with first non-orthologous sequence - L.major:120 S.stipitis:141

Q4Q5M6              	100.00%		A3GHW9              	100.00%
Bootstrap support for Q4Q5M6 as seed ortholog is 99%.
Bootstrap support for A3GHW9 as seed ortholog is 99%.

Group of orthologs #274. Best score 315 bits
Score difference with first non-orthologous sequence - L.major:315 S.stipitis:315

Q4Q0W1              	100.00%		A3GFH8              	100.00%
Bootstrap support for Q4Q0W1 as seed ortholog is 100%.
Bootstrap support for A3GFH8 as seed ortholog is 100%.

Group of orthologs #275. Best score 314 bits
Score difference with first non-orthologous sequence - L.major:24 S.stipitis:58

Q4FX34              	100.00%		A3LZ01              	100.00%
Bootstrap support for Q4FX34 as seed ortholog is 72%.
Alternative seed ortholog is Q4QAU4 (24 bits away from this cluster)
Bootstrap support for A3LZ01 as seed ortholog is 93%.

Group of orthologs #276. Best score 314 bits
Score difference with first non-orthologous sequence - L.major:192 S.stipitis:314

Q4QGG2              	100.00%		A3GGS1              	100.00%
Bootstrap support for Q4QGG2 as seed ortholog is 100%.
Bootstrap support for A3GGS1 as seed ortholog is 100%.

Group of orthologs #277. Best score 312 bits
Score difference with first non-orthologous sequence - L.major:239 S.stipitis:312

Q4QGN0              	100.00%		A3LPT6              	100.00%
Bootstrap support for Q4QGN0 as seed ortholog is 100%.
Bootstrap support for A3LPT6 as seed ortholog is 100%.

Group of orthologs #278. Best score 312 bits
Score difference with first non-orthologous sequence - L.major:312 S.stipitis:312

Q4QJ42              	100.00%		A3M037              	100.00%
Bootstrap support for Q4QJ42 as seed ortholog is 100%.
Bootstrap support for A3M037 as seed ortholog is 100%.

Group of orthologs #279. Best score 307 bits
Score difference with first non-orthologous sequence - L.major:307 S.stipitis:307

Q4Q0B8              	100.00%		A3LQ06              	100.00%
Bootstrap support for Q4Q0B8 as seed ortholog is 100%.
Bootstrap support for A3LQ06 as seed ortholog is 100%.

Group of orthologs #280. Best score 305 bits
Score difference with first non-orthologous sequence - L.major:98 S.stipitis:305

Q4Q8E2              	100.00%		A3LTK0              	100.00%
Bootstrap support for Q4Q8E2 as seed ortholog is 94%.
Bootstrap support for A3LTK0 as seed ortholog is 100%.

Group of orthologs #281. Best score 304 bits
Score difference with first non-orthologous sequence - L.major:304 S.stipitis:304

Q4Q7W9              	100.00%		A3LUI1              	100.00%
                    	       		A3GFS9              	29.71%
Bootstrap support for Q4Q7W9 as seed ortholog is 100%.
Bootstrap support for A3LUI1 as seed ortholog is 100%.

Group of orthologs #282. Best score 304 bits
Score difference with first non-orthologous sequence - L.major:211 S.stipitis:205

Q4Q9V1              	100.00%		A3LW11              	100.00%
Bootstrap support for Q4Q9V1 as seed ortholog is 100%.
Bootstrap support for A3LW11 as seed ortholog is 100%.

Group of orthologs #283. Best score 303 bits
Score difference with first non-orthologous sequence - L.major:303 S.stipitis:303

Q4Q8P6              	100.00%		A3GEZ4              	100.00%
Bootstrap support for Q4Q8P6 as seed ortholog is 100%.
Bootstrap support for A3GEZ4 as seed ortholog is 100%.

Group of orthologs #284. Best score 303 bits
Score difference with first non-orthologous sequence - L.major:303 S.stipitis:303

Q4QE53              	100.00%		A3LP90              	100.00%
Bootstrap support for Q4QE53 as seed ortholog is 100%.
Bootstrap support for A3LP90 as seed ortholog is 100%.

Group of orthologs #285. Best score 303 bits
Score difference with first non-orthologous sequence - L.major:303 S.stipitis:303

Q9NGR0              	100.00%		A3GI40              	100.00%
Bootstrap support for Q9NGR0 as seed ortholog is 100%.
Bootstrap support for A3GI40 as seed ortholog is 100%.

Group of orthologs #286. Best score 302 bits
Score difference with first non-orthologous sequence - L.major:302 S.stipitis:302

O97193              	100.00%		A3GEU3              	100.00%
Bootstrap support for O97193 as seed ortholog is 100%.
Bootstrap support for A3GEU3 as seed ortholog is 100%.

Group of orthologs #287. Best score 300 bits
Score difference with first non-orthologous sequence - L.major:300 S.stipitis:58

Q4Q2L9              	100.00%		A3GF21              	100.00%
                    	       		A3GGL8              	60.77%
Bootstrap support for Q4Q2L9 as seed ortholog is 100%.
Bootstrap support for A3GF21 as seed ortholog is 88%.

Group of orthologs #288. Best score 300 bits
Score difference with first non-orthologous sequence - L.major:117 S.stipitis:110

Q4QE27              	100.00%		A3LNZ4              	100.00%
Bootstrap support for Q4QE27 as seed ortholog is 99%.
Bootstrap support for A3LNZ4 as seed ortholog is 99%.

Group of orthologs #289. Best score 300 bits
Score difference with first non-orthologous sequence - L.major:300 S.stipitis:300

Q4Q5H3              	100.00%		A3LXR1              	100.00%
Bootstrap support for Q4Q5H3 as seed ortholog is 100%.
Bootstrap support for A3LXR1 as seed ortholog is 100%.

Group of orthologs #290. Best score 299 bits
Score difference with first non-orthologous sequence - L.major:299 S.stipitis:299

Q4Q1Y7              	100.00%		A3LYX3              	100.00%
Bootstrap support for Q4Q1Y7 as seed ortholog is 100%.
Bootstrap support for A3LYX3 as seed ortholog is 100%.

Group of orthologs #291. Best score 299 bits
Score difference with first non-orthologous sequence - L.major:200 S.stipitis:299

Q4Q870              	100.00%		A3LWR2              	100.00%
Bootstrap support for Q4Q870 as seed ortholog is 99%.
Bootstrap support for A3LWR2 as seed ortholog is 100%.

Group of orthologs #292. Best score 298 bits
Score difference with first non-orthologous sequence - L.major:58 S.stipitis:160

Q4QCE7              	100.00%		A3GHM9              	100.00%
                    	       		A3LR07              	62.02%
                    	       		A3LP41              	19.81%
Bootstrap support for Q4QCE7 as seed ortholog is 94%.
Bootstrap support for A3GHM9 as seed ortholog is 100%.

Group of orthologs #293. Best score 298 bits
Score difference with first non-orthologous sequence - L.major:298 S.stipitis:298

Q4Q5U8              	100.00%		A3LRI0              	100.00%
Bootstrap support for Q4Q5U8 as seed ortholog is 100%.
Bootstrap support for A3LRI0 as seed ortholog is 100%.

Group of orthologs #294. Best score 297 bits
Score difference with first non-orthologous sequence - L.major:297 S.stipitis:297

Q4QE48              	100.00%		A3GFK2              	100.00%
Bootstrap support for Q4QE48 as seed ortholog is 100%.
Bootstrap support for A3GFK2 as seed ortholog is 100%.

Group of orthologs #295. Best score 297 bits
Score difference with first non-orthologous sequence - L.major:184 S.stipitis:297

Q4QFS8              	100.00%		A3LQB6              	100.00%
Bootstrap support for Q4QFS8 as seed ortholog is 99%.
Bootstrap support for A3LQB6 as seed ortholog is 100%.

Group of orthologs #296. Best score 296 bits
Score difference with first non-orthologous sequence - L.major:296 S.stipitis:296

Q4QEF9              	100.00%		A3LUK5              	100.00%
Bootstrap support for Q4QEF9 as seed ortholog is 100%.
Bootstrap support for A3LUK5 as seed ortholog is 100%.

Group of orthologs #297. Best score 295 bits
Score difference with first non-orthologous sequence - L.major:169 S.stipitis:154

Q4QFT8              	100.00%		A3LMX1              	100.00%
Bootstrap support for Q4QFT8 as seed ortholog is 99%.
Bootstrap support for A3LMX1 as seed ortholog is 99%.

Group of orthologs #298. Best score 295 bits
Score difference with first non-orthologous sequence - L.major:72 S.stipitis:85

Q4QE15              	100.00%		A3LUB6              	100.00%
Bootstrap support for Q4QE15 as seed ortholog is 99%.
Bootstrap support for A3LUB6 as seed ortholog is 98%.

Group of orthologs #299. Best score 294 bits
Score difference with first non-orthologous sequence - L.major:294 S.stipitis:294

Q4Q5P0              	100.00%		A3GFH5              	100.00%
Q4QDL5              	100.00%		
Bootstrap support for Q4Q5P0 as seed ortholog is 100%.
Bootstrap support for Q4QDL5 as seed ortholog is 100%.
Bootstrap support for A3GFH5 as seed ortholog is 100%.

Group of orthologs #300. Best score 293 bits
Score difference with first non-orthologous sequence - L.major:293 S.stipitis:293

Q4QIU4              	100.00%		A3LPA1              	100.00%
Bootstrap support for Q4QIU4 as seed ortholog is 100%.
Bootstrap support for A3LPA1 as seed ortholog is 100%.

Group of orthologs #301. Best score 292 bits
Score difference with first non-orthologous sequence - L.major:175 S.stipitis:152

Q4Q2D8              	100.00%		A3GH05              	100.00%
Bootstrap support for Q4Q2D8 as seed ortholog is 100%.
Bootstrap support for A3GH05 as seed ortholog is 99%.

Group of orthologs #302. Best score 291 bits
Score difference with first non-orthologous sequence - L.major:24 S.stipitis:54

Q4Q449              	100.00%		A3GF15              	100.00%
                    	       		A3LY05              	25.34%
                    	       		A3LZQ5              	9.64%
Bootstrap support for Q4Q449 as seed ortholog is 72%.
Alternative seed ortholog is Q4Q204 (24 bits away from this cluster)
Bootstrap support for A3GF15 as seed ortholog is 90%.

Group of orthologs #303. Best score 291 bits
Score difference with first non-orthologous sequence - L.major:291 S.stipitis:291

E9ADH8              	100.00%		A3LXQ0              	100.00%
Bootstrap support for E9ADH8 as seed ortholog is 100%.
Bootstrap support for A3LXQ0 as seed ortholog is 100%.

Group of orthologs #304. Best score 289 bits
Score difference with first non-orthologous sequence - L.major:78 S.stipitis:64

E9ACW0              	100.00%		A3M086              	100.00%
Q4QCG6              	11.18%		
Bootstrap support for E9ACW0 as seed ortholog is 98%.
Bootstrap support for A3M086 as seed ortholog is 87%.

Group of orthologs #305. Best score 288 bits
Score difference with first non-orthologous sequence - L.major:288 S.stipitis:288

E9AF09              	100.00%		A3LPI4              	100.00%
E9AF10              	100.00%		
Bootstrap support for E9AF09 as seed ortholog is 100%.
Bootstrap support for E9AF10 as seed ortholog is 100%.
Bootstrap support for A3LPI4 as seed ortholog is 100%.

Group of orthologs #306. Best score 287 bits
Score difference with first non-orthologous sequence - L.major:287 S.stipitis:287

Q4QAF9              	100.00%		A3LMW8              	100.00%
Bootstrap support for Q4QAF9 as seed ortholog is 100%.
Bootstrap support for A3LMW8 as seed ortholog is 100%.

Group of orthologs #307. Best score 287 bits
Score difference with first non-orthologous sequence - L.major:287 S.stipitis:287

Q4QAI9              	100.00%		A3LSY2              	100.00%
Bootstrap support for Q4QAI9 as seed ortholog is 100%.
Bootstrap support for A3LSY2 as seed ortholog is 100%.

Group of orthologs #308. Best score 286 bits
Score difference with first non-orthologous sequence - L.major:286 S.stipitis:286

Q4QCD3              	100.00%		A3LRK4              	100.00%
Bootstrap support for Q4QCD3 as seed ortholog is 100%.
Bootstrap support for A3LRK4 as seed ortholog is 100%.

Group of orthologs #309. Best score 283 bits
Score difference with first non-orthologous sequence - L.major:283 S.stipitis:283

Q4Q8F2              	100.00%		A3LWN0              	100.00%
Bootstrap support for Q4Q8F2 as seed ortholog is 100%.
Bootstrap support for A3LWN0 as seed ortholog is 100%.

Group of orthologs #310. Best score 282 bits
Score difference with first non-orthologous sequence - L.major:77 S.stipitis:119

Q4Q5Y0              	100.00%		A3LZR8              	100.00%
                    	       		A3LYV6              	89.16%
Bootstrap support for Q4Q5Y0 as seed ortholog is 99%.
Bootstrap support for A3LZR8 as seed ortholog is 100%.

Group of orthologs #311. Best score 282 bits
Score difference with first non-orthologous sequence - L.major:282 S.stipitis:282

E9ADM4              	100.00%		A3LRW3              	100.00%
Bootstrap support for E9ADM4 as seed ortholog is 100%.
Bootstrap support for A3LRW3 as seed ortholog is 100%.

Group of orthologs #312. Best score 282 bits
Score difference with first non-orthologous sequence - L.major:282 S.stipitis:282

Q4QBE8              	100.00%		A3GH36              	100.00%
Bootstrap support for Q4QBE8 as seed ortholog is 100%.
Bootstrap support for A3GH36 as seed ortholog is 100%.

Group of orthologs #313. Best score 282 bits
Score difference with first non-orthologous sequence - L.major:282 S.stipitis:282

P84155              	100.00%		A3LZU4              	100.00%
Bootstrap support for P84155 as seed ortholog is 100%.
Bootstrap support for A3LZU4 as seed ortholog is 100%.

Group of orthologs #314. Best score 282 bits
Score difference with first non-orthologous sequence - L.major:282 S.stipitis:186

Q4Q7Y7              	100.00%		A3LWH7              	100.00%
Bootstrap support for Q4Q7Y7 as seed ortholog is 100%.
Bootstrap support for A3LWH7 as seed ortholog is 100%.

Group of orthologs #315. Best score 281 bits
Score difference with first non-orthologous sequence - L.major:195 S.stipitis:214

E9AFL2              	100.00%		A3LNJ0              	100.00%
Bootstrap support for E9AFL2 as seed ortholog is 100%.
Bootstrap support for A3LNJ0 as seed ortholog is 100%.

Group of orthologs #316. Best score 281 bits
Score difference with first non-orthologous sequence - L.major:209 S.stipitis:281

Q4Q3F9              	100.00%		A3LR72              	100.00%
Bootstrap support for Q4Q3F9 as seed ortholog is 100%.
Bootstrap support for A3LR72 as seed ortholog is 100%.

Group of orthologs #317. Best score 280 bits
Score difference with first non-orthologous sequence - L.major:280 S.stipitis:280

Q4QH80              	100.00%		A3LUV0              	100.00%
Q4Q3K9              	65.87%		A3GHU0              	43.55%
Bootstrap support for Q4QH80 as seed ortholog is 100%.
Bootstrap support for A3LUV0 as seed ortholog is 100%.

Group of orthologs #318. Best score 280 bits
Score difference with first non-orthologous sequence - L.major:280 S.stipitis:280

Q4Q732              	100.00%		A3LWJ5              	100.00%
Bootstrap support for Q4Q732 as seed ortholog is 100%.
Bootstrap support for A3LWJ5 as seed ortholog is 100%.

Group of orthologs #319. Best score 280 bits
Score difference with first non-orthologous sequence - L.major:165 S.stipitis:280

Q4QEC3              	100.00%		A3LX94              	100.00%
Bootstrap support for Q4QEC3 as seed ortholog is 100%.
Bootstrap support for A3LX94 as seed ortholog is 100%.

Group of orthologs #320. Best score 279 bits
Score difference with first non-orthologous sequence - L.major:279 S.stipitis:124

Q4QDZ7              	100.00%		A3LY85              	100.00%
                    	       		A3GFU2              	35.92%
                    	       		A3LU84              	28.45%
Bootstrap support for Q4QDZ7 as seed ortholog is 100%.
Bootstrap support for A3LY85 as seed ortholog is 99%.

Group of orthologs #321. Best score 279 bits
Score difference with first non-orthologous sequence - L.major:279 S.stipitis:279

Q4Q1M7              	100.00%		A3LR94              	100.00%
Bootstrap support for Q4Q1M7 as seed ortholog is 100%.
Bootstrap support for A3LR94 as seed ortholog is 100%.

Group of orthologs #322. Best score 279 bits
Score difference with first non-orthologous sequence - L.major:279 S.stipitis:279

Q4Q3E2              	100.00%		A3LWP3              	100.00%
Bootstrap support for Q4Q3E2 as seed ortholog is 100%.
Bootstrap support for A3LWP3 as seed ortholog is 100%.

Group of orthologs #323. Best score 279 bits
Score difference with first non-orthologous sequence - L.major:279 S.stipitis:279

Q4QIK7              	100.00%		A3GI60              	100.00%
Bootstrap support for Q4QIK7 as seed ortholog is 100%.
Bootstrap support for A3GI60 as seed ortholog is 100%.

Group of orthologs #324. Best score 277 bits
Score difference with first non-orthologous sequence - L.major:277 S.stipitis:277

Q4Q7G8              	100.00%		A3LZ16              	100.00%
Bootstrap support for Q4Q7G8 as seed ortholog is 100%.
Bootstrap support for A3LZ16 as seed ortholog is 100%.

Group of orthologs #325. Best score 276 bits
Score difference with first non-orthologous sequence - L.major:73 S.stipitis:276

Q4QH82              	100.00%		A3GGL3              	100.00%
Q4QHL7              	100.00%		
E9ACJ5              	34.29%		
Bootstrap support for Q4QH82 as seed ortholog is 82%.
Bootstrap support for Q4QHL7 as seed ortholog is 81%.
Bootstrap support for A3GGL3 as seed ortholog is 100%.

Group of orthologs #326. Best score 276 bits
Score difference with first non-orthologous sequence - L.major:276 S.stipitis:276

O97213              	100.00%		A3LR93              	100.00%
Bootstrap support for O97213 as seed ortholog is 100%.
Bootstrap support for A3LR93 as seed ortholog is 100%.

Group of orthologs #327. Best score 275 bits
Score difference with first non-orthologous sequence - L.major:107 S.stipitis:119

E9ACY2              	100.00%		A3LWH3              	100.00%
Bootstrap support for E9ACY2 as seed ortholog is 96%.
Bootstrap support for A3LWH3 as seed ortholog is 99%.

Group of orthologs #328. Best score 275 bits
Score difference with first non-orthologous sequence - L.major:275 S.stipitis:275

Q4QDM2              	100.00%		A3LWV8              	100.00%
Bootstrap support for Q4QDM2 as seed ortholog is 100%.
Bootstrap support for A3LWV8 as seed ortholog is 100%.

Group of orthologs #329. Best score 274 bits
Score difference with first non-orthologous sequence - L.major:274 S.stipitis:274

Q4Q2E4              	100.00%		A3LQX8              	100.00%
Bootstrap support for Q4Q2E4 as seed ortholog is 100%.
Bootstrap support for A3LQX8 as seed ortholog is 100%.

Group of orthologs #330. Best score 274 bits
Score difference with first non-orthologous sequence - L.major:274 S.stipitis:274

Q4QBY3              	100.00%		A3LQ84              	100.00%
Bootstrap support for Q4QBY3 as seed ortholog is 100%.
Bootstrap support for A3LQ84 as seed ortholog is 100%.

Group of orthologs #331. Best score 272 bits
Score difference with first non-orthologous sequence - L.major:39 S.stipitis:272

E9AEC8              	100.00%		A3LN13              	100.00%
Bootstrap support for E9AEC8 as seed ortholog is 71%.
Alternative seed ortholog is E9ACK4 (39 bits away from this cluster)
Bootstrap support for A3LN13 as seed ortholog is 100%.

Group of orthologs #332. Best score 272 bits
Score difference with first non-orthologous sequence - L.major:272 S.stipitis:272

Q4Q5W4              	100.00%		A3LTQ5              	100.00%
Bootstrap support for Q4Q5W4 as seed ortholog is 100%.
Bootstrap support for A3LTQ5 as seed ortholog is 100%.

Group of orthologs #333. Best score 272 bits
Score difference with first non-orthologous sequence - L.major:97 S.stipitis:91

Q4QIV8              	100.00%		A3LQA3              	100.00%
Bootstrap support for Q4QIV8 as seed ortholog is 98%.
Bootstrap support for A3LQA3 as seed ortholog is 98%.

Group of orthologs #334. Best score 272 bits
Score difference with first non-orthologous sequence - L.major:15 S.stipitis:272

Q4QBD6              	100.00%		A3LY04              	100.00%
Bootstrap support for Q4QBD6 as seed ortholog is 69%.
Alternative seed ortholog is Q4Q1D0 (15 bits away from this cluster)
Bootstrap support for A3LY04 as seed ortholog is 100%.

Group of orthologs #335. Best score 270 bits
Score difference with first non-orthologous sequence - L.major:270 S.stipitis:270

Q4Q1I2              	100.00%		A3GHB4              	100.00%
Q4Q1I3              	100.00%		
Bootstrap support for Q4Q1I2 as seed ortholog is 100%.
Bootstrap support for Q4Q1I3 as seed ortholog is 100%.
Bootstrap support for A3GHB4 as seed ortholog is 100%.

Group of orthologs #336. Best score 270 bits
Score difference with first non-orthologous sequence - L.major:270 S.stipitis:270

Q4Q6A1              	100.00%		A3LVJ1              	100.00%
Bootstrap support for Q4Q6A1 as seed ortholog is 100%.
Bootstrap support for A3LVJ1 as seed ortholog is 100%.

Group of orthologs #337. Best score 269 bits
Score difference with first non-orthologous sequence - L.major:269 S.stipitis:269

Q4Q7U7              	100.00%		A3GI57              	100.00%
Bootstrap support for Q4Q7U7 as seed ortholog is 100%.
Bootstrap support for A3GI57 as seed ortholog is 100%.

Group of orthologs #338. Best score 268 bits
Score difference with first non-orthologous sequence - L.major:99 S.stipitis:68

E9AD53              	100.00%		A3LRF3              	100.00%
Bootstrap support for E9AD53 as seed ortholog is 99%.
Bootstrap support for A3LRF3 as seed ortholog is 99%.

Group of orthologs #339. Best score 267 bits
Score difference with first non-orthologous sequence - L.major:267 S.stipitis:267

E9ADI3              	100.00%		A3LNY1              	100.00%
                    	       		A3LVU4              	100.00%
Bootstrap support for E9ADI3 as seed ortholog is 100%.
Bootstrap support for A3LNY1 as seed ortholog is 100%.
Bootstrap support for A3LVU4 as seed ortholog is 100%.

Group of orthologs #340. Best score 267 bits
Score difference with first non-orthologous sequence - L.major:267 S.stipitis:267

Q9NF84              	100.00%		A3LPS9              	100.00%
Bootstrap support for Q9NF84 as seed ortholog is 100%.
Bootstrap support for A3LPS9 as seed ortholog is 100%.

Group of orthologs #341. Best score 265 bits
Score difference with first non-orthologous sequence - L.major:265 S.stipitis:265

Q4QC00              	100.00%		A3LP99              	100.00%
Bootstrap support for Q4QC00 as seed ortholog is 100%.
Bootstrap support for A3LP99 as seed ortholog is 100%.

Group of orthologs #342. Best score 264 bits
Score difference with first non-orthologous sequence - L.major:264 S.stipitis:264

E9ADG7              	100.00%		A3LWI4              	100.00%
Bootstrap support for E9ADG7 as seed ortholog is 100%.
Bootstrap support for A3LWI4 as seed ortholog is 100%.

Group of orthologs #343. Best score 264 bits
Score difference with first non-orthologous sequence - L.major:264 S.stipitis:264

Q4QDU3              	100.00%		A3LP67              	100.00%
Bootstrap support for Q4QDU3 as seed ortholog is 100%.
Bootstrap support for A3LP67 as seed ortholog is 100%.

Group of orthologs #344. Best score 264 bits
Score difference with first non-orthologous sequence - L.major:264 S.stipitis:264

Q4Q3R4              	100.00%		A3LZS7              	100.00%
Bootstrap support for Q4Q3R4 as seed ortholog is 100%.
Bootstrap support for A3LZS7 as seed ortholog is 100%.

Group of orthologs #345. Best score 264 bits
Score difference with first non-orthologous sequence - L.major:12 S.stipitis:50

Q4QHG6              	100.00%		A3LN91              	100.00%
Bootstrap support for Q4QHG6 as seed ortholog is 62%.
Alternative seed ortholog is Q4QD66 (12 bits away from this cluster)
Bootstrap support for A3LN91 as seed ortholog is 88%.

Group of orthologs #346. Best score 261 bits
Score difference with first non-orthologous sequence - L.major:204 S.stipitis:73

E9AC41              	100.00%		A3GI75              	100.00%
E9AC43              	29.39%		
E9AC40              	29.14%		
E9ACH0              	28.12%		
E9AC38              	26.35%		
Bootstrap support for E9AC41 as seed ortholog is 99%.
Bootstrap support for A3GI75 as seed ortholog is 89%.

Group of orthologs #347. Best score 261 bits
Score difference with first non-orthologous sequence - L.major:88 S.stipitis:72

E9AFS0              	100.00%		A3LU37              	100.00%
E9AFR9              	93.94%		
Bootstrap support for E9AFS0 as seed ortholog is 98%.
Bootstrap support for A3LU37 as seed ortholog is 98%.

Group of orthologs #348. Best score 261 bits
Score difference with first non-orthologous sequence - L.major:261 S.stipitis:261

Q4Q2U3              	100.00%		A3GHG4              	100.00%
Bootstrap support for Q4Q2U3 as seed ortholog is 100%.
Bootstrap support for A3GHG4 as seed ortholog is 100%.

Group of orthologs #349. Best score 261 bits
Score difference with first non-orthologous sequence - L.major:261 S.stipitis:261

Q4Q5U4              	100.00%		A3LQW6              	100.00%
Bootstrap support for Q4Q5U4 as seed ortholog is 100%.
Bootstrap support for A3LQW6 as seed ortholog is 100%.

Group of orthologs #350. Best score 261 bits
Score difference with first non-orthologous sequence - L.major:261 S.stipitis:261

Q4Q543              	100.00%		A3LU51              	100.00%
Bootstrap support for Q4Q543 as seed ortholog is 100%.
Bootstrap support for A3LU51 as seed ortholog is 100%.

Group of orthologs #351. Best score 260 bits
Score difference with first non-orthologous sequence - L.major:260 S.stipitis:260

Q4Q6Y9              	100.00%		A3LNJ9              	100.00%
Bootstrap support for Q4Q6Y9 as seed ortholog is 100%.
Bootstrap support for A3LNJ9 as seed ortholog is 100%.

Group of orthologs #352. Best score 257 bits
Score difference with first non-orthologous sequence - L.major:257 S.stipitis:257

Q4QEZ6              	100.00%		A3LPZ7              	100.00%
Q4QB17              	10.76%		
Bootstrap support for Q4QEZ6 as seed ortholog is 100%.
Bootstrap support for A3LPZ7 as seed ortholog is 100%.

Group of orthologs #353. Best score 257 bits
Score difference with first non-orthologous sequence - L.major:257 S.stipitis:257

E9ADM6              	100.00%		A3LQG1              	100.00%
Bootstrap support for E9ADM6 as seed ortholog is 100%.
Bootstrap support for A3LQG1 as seed ortholog is 100%.

Group of orthologs #354. Best score 257 bits
Score difference with first non-orthologous sequence - L.major:125 S.stipitis:52

E9AFE7              	100.00%		A3LSH7              	100.00%
Bootstrap support for E9AFE7 as seed ortholog is 99%.
Bootstrap support for A3LSH7 as seed ortholog is 86%.

Group of orthologs #355. Best score 256 bits
Score difference with first non-orthologous sequence - L.major:256 S.stipitis:256

E9AFK8              	100.00%		A3GI79              	100.00%
Bootstrap support for E9AFK8 as seed ortholog is 100%.
Bootstrap support for A3GI79 as seed ortholog is 100%.

Group of orthologs #356. Best score 256 bits
Score difference with first non-orthologous sequence - L.major:207 S.stipitis:189

E9ACE1              	100.00%		A3LV54              	100.00%
Bootstrap support for E9ACE1 as seed ortholog is 100%.
Bootstrap support for A3LV54 as seed ortholog is 99%.

Group of orthologs #357. Best score 256 bits
Score difference with first non-orthologous sequence - L.major:256 S.stipitis:256

Q4Q2S0              	100.00%		A3LX09              	100.00%
Bootstrap support for Q4Q2S0 as seed ortholog is 100%.
Bootstrap support for A3LX09 as seed ortholog is 100%.

Group of orthologs #358. Best score 256 bits
Score difference with first non-orthologous sequence - L.major:14 S.stipitis:256

Q4QDJ5              	100.00%		A3LU60              	100.00%
Bootstrap support for Q4QDJ5 as seed ortholog is 69%.
Alternative seed ortholog is Q4Q881 (14 bits away from this cluster)
Bootstrap support for A3LU60 as seed ortholog is 100%.

Group of orthologs #359. Best score 255 bits
Score difference with first non-orthologous sequence - L.major:112 S.stipitis:79

E9AFV2              	100.00%		A3GID6              	100.00%
Bootstrap support for E9AFV2 as seed ortholog is 99%.
Bootstrap support for A3GID6 as seed ortholog is 97%.

Group of orthologs #360. Best score 255 bits
Score difference with first non-orthologous sequence - L.major:35 S.stipitis:255

Q4Q1K4              	100.00%		A3M075              	100.00%
Bootstrap support for Q4Q1K4 as seed ortholog is 75%.
Bootstrap support for A3M075 as seed ortholog is 100%.

Group of orthologs #361. Best score 255 bits
Score difference with first non-orthologous sequence - L.major:255 S.stipitis:255

Q4Q7Z4              	100.00%		A3LUY5              	100.00%
Bootstrap support for Q4Q7Z4 as seed ortholog is 100%.
Bootstrap support for A3LUY5 as seed ortholog is 100%.

Group of orthologs #362. Best score 255 bits
Score difference with first non-orthologous sequence - L.major:255 S.stipitis:255

Q4Q9E8              	100.00%		A3LU28              	100.00%
Bootstrap support for Q4Q9E8 as seed ortholog is 100%.
Bootstrap support for A3LU28 as seed ortholog is 100%.

Group of orthologs #363. Best score 254 bits
Score difference with first non-orthologous sequence - L.major:84 S.stipitis:117

Q4Q3Z4              	100.00%		A3GG91              	100.00%
Q4QI56              	22.10%		A3LTI2              	46.07%
Q4Q0M2              	20.79%		
Bootstrap support for Q4Q3Z4 as seed ortholog is 99%.
Bootstrap support for A3GG91 as seed ortholog is 99%.

Group of orthologs #364. Best score 254 bits
Score difference with first non-orthologous sequence - L.major:254 S.stipitis:254

Q4QG31              	100.00%		A3GFG0              	100.00%
                    	       		A3LZ47              	100.00%
Bootstrap support for Q4QG31 as seed ortholog is 100%.
Bootstrap support for A3GFG0 as seed ortholog is 100%.
Bootstrap support for A3LZ47 as seed ortholog is 100%.

Group of orthologs #365. Best score 254 bits
Score difference with first non-orthologous sequence - L.major:254 S.stipitis:173

Q4QCJ0              	100.00%		A3M060              	100.00%
Q4VT70              	100.00%		
Bootstrap support for Q4QCJ0 as seed ortholog is 100%.
Bootstrap support for Q4VT70 as seed ortholog is 100%.
Bootstrap support for A3M060 as seed ortholog is 100%.

Group of orthologs #366. Best score 254 bits
Score difference with first non-orthologous sequence - L.major:254 S.stipitis:254

Q4Q0R9              	100.00%		A3LN21              	100.00%
Bootstrap support for Q4Q0R9 as seed ortholog is 100%.
Bootstrap support for A3LN21 as seed ortholog is 100%.

Group of orthologs #367. Best score 253 bits
Score difference with first non-orthologous sequence - L.major:253 S.stipitis:253

Q4Q923              	100.00%		A3LQP8              	100.00%
Q4Q925              	100.00%		
Bootstrap support for Q4Q923 as seed ortholog is 100%.
Bootstrap support for Q4Q925 as seed ortholog is 100%.
Bootstrap support for A3LQP8 as seed ortholog is 100%.

Group of orthologs #368. Best score 253 bits
Score difference with first non-orthologous sequence - L.major:253 S.stipitis:253

Q4QCG8              	100.00%		A3LT23              	100.00%
Bootstrap support for Q4QCG8 as seed ortholog is 100%.
Bootstrap support for A3LT23 as seed ortholog is 100%.

Group of orthologs #369. Best score 252 bits
Score difference with first non-orthologous sequence - L.major:252 S.stipitis:252

E9ACB2              	100.00%		A3LTN8              	100.00%
Bootstrap support for E9ACB2 as seed ortholog is 100%.
Bootstrap support for A3LTN8 as seed ortholog is 100%.

Group of orthologs #370. Best score 252 bits
Score difference with first non-orthologous sequence - L.major:252 S.stipitis:252

Q4Q9V9              	100.00%		A3LN83              	100.00%
Bootstrap support for Q4Q9V9 as seed ortholog is 100%.
Bootstrap support for A3LN83 as seed ortholog is 100%.

Group of orthologs #371. Best score 252 bits
Score difference with first non-orthologous sequence - L.major:252 S.stipitis:252

Q4Q7R0              	100.00%		A3LSB1              	100.00%
Bootstrap support for Q4Q7R0 as seed ortholog is 100%.
Bootstrap support for A3LSB1 as seed ortholog is 100%.

Group of orthologs #372. Best score 252 bits
Score difference with first non-orthologous sequence - L.major:252 S.stipitis:252

Q4QH08              	100.00%		A3LX15              	100.00%
Bootstrap support for Q4QH08 as seed ortholog is 100%.
Bootstrap support for A3LX15 as seed ortholog is 100%.

Group of orthologs #373. Best score 250 bits
Score difference with first non-orthologous sequence - L.major:250 S.stipitis:250

Q4QAC9              	100.00%		A3LQL4              	100.00%
Bootstrap support for Q4QAC9 as seed ortholog is 100%.
Bootstrap support for A3LQL4 as seed ortholog is 100%.

Group of orthologs #374. Best score 250 bits
Score difference with first non-orthologous sequence - L.major:250 S.stipitis:169

Q4QIT9              	100.00%		A3LWS6              	100.00%
Bootstrap support for Q4QIT9 as seed ortholog is 100%.
Bootstrap support for A3LWS6 as seed ortholog is 99%.

Group of orthologs #375. Best score 249 bits
Score difference with first non-orthologous sequence - L.major:2 S.stipitis:249

Q4Q198              	100.00%		A3LXG8              	100.00%
Bootstrap support for Q4Q198 as seed ortholog is 46%.
Alternative seed ortholog is Q4QH45 (2 bits away from this cluster)
Bootstrap support for A3LXG8 as seed ortholog is 100%.

Group of orthologs #376. Best score 248 bits
Score difference with first non-orthologous sequence - L.major:248 S.stipitis:248

Q4Q6S3              	100.00%		A3M095              	100.00%
E9AF12              	95.53%		
Bootstrap support for Q4Q6S3 as seed ortholog is 100%.
Bootstrap support for A3M095 as seed ortholog is 100%.

Group of orthologs #377. Best score 248 bits
Score difference with first non-orthologous sequence - L.major:248 S.stipitis:248

E9ADK4              	100.00%		A3GF17              	100.00%
Bootstrap support for E9ADK4 as seed ortholog is 100%.
Bootstrap support for A3GF17 as seed ortholog is 100%.

Group of orthologs #378. Best score 248 bits
Score difference with first non-orthologous sequence - L.major:248 S.stipitis:248

Q4Q286              	100.00%		A3LSA9              	100.00%
Bootstrap support for Q4Q286 as seed ortholog is 100%.
Bootstrap support for A3LSA9 as seed ortholog is 100%.

Group of orthologs #379. Best score 248 bits
Score difference with first non-orthologous sequence - L.major:248 S.stipitis:248

Q4QJ88              	100.00%		A3LSU9              	100.00%
Bootstrap support for Q4QJ88 as seed ortholog is 100%.
Bootstrap support for A3LSU9 as seed ortholog is 100%.

Group of orthologs #380. Best score 248 bits
Score difference with first non-orthologous sequence - L.major:248 S.stipitis:248

Q4QFU3              	100.00%		A3LXV1              	100.00%
Bootstrap support for Q4QFU3 as seed ortholog is 100%.
Bootstrap support for A3LXV1 as seed ortholog is 100%.

Group of orthologs #381. Best score 247 bits
Score difference with first non-orthologous sequence - L.major:247 S.stipitis:247

E9AFE9              	100.00%		A3LVH9              	100.00%
Bootstrap support for E9AFE9 as seed ortholog is 100%.
Bootstrap support for A3LVH9 as seed ortholog is 100%.

Group of orthologs #382. Best score 247 bits
Score difference with first non-orthologous sequence - L.major:47 S.stipitis:92

E9AFM8              	100.00%		A3LX02              	100.00%
Bootstrap support for E9AFM8 as seed ortholog is 83%.
Bootstrap support for A3LX02 as seed ortholog is 96%.

Group of orthologs #383. Best score 247 bits
Score difference with first non-orthologous sequence - L.major:128 S.stipitis:247

Q4QBM3              	100.00%		A3LY41              	100.00%
Bootstrap support for Q4QBM3 as seed ortholog is 99%.
Bootstrap support for A3LY41 as seed ortholog is 100%.

Group of orthologs #384. Best score 246 bits
Score difference with first non-orthologous sequence - L.major:246 S.stipitis:246

O97209              	100.00%		A3LU56              	100.00%
Bootstrap support for O97209 as seed ortholog is 100%.
Bootstrap support for A3LU56 as seed ortholog is 100%.

Group of orthologs #385. Best score 245 bits
Score difference with first non-orthologous sequence - L.major:245 S.stipitis:245

Q4Q932              	100.00%		A3LVH0              	100.00%
Bootstrap support for Q4Q932 as seed ortholog is 100%.
Bootstrap support for A3LVH0 as seed ortholog is 100%.

Group of orthologs #386. Best score 244 bits
Score difference with first non-orthologous sequence - L.major:244 S.stipitis:244

Q4Q1Q9              	100.00%		A3LVY9              	100.00%
Bootstrap support for Q4Q1Q9 as seed ortholog is 100%.
Bootstrap support for A3LVY9 as seed ortholog is 100%.

Group of orthologs #387. Best score 244 bits
Score difference with first non-orthologous sequence - L.major:61 S.stipitis:58

Q4QFH1              	100.00%		A3LSN3              	100.00%
Bootstrap support for Q4QFH1 as seed ortholog is 87%.
Bootstrap support for A3LSN3 as seed ortholog is 88%.

Group of orthologs #388. Best score 243 bits
Score difference with first non-orthologous sequence - L.major:243 S.stipitis:112

Q4QBD8              	100.00%		A3LSQ4              	100.00%
                    	       		A3LT79              	16.27%
                    	       		A3GHR6              	12.10%
                    	       		A3GHL4              	10.52%
                    	       		A3LSI9              	10.12%
Bootstrap support for Q4QBD8 as seed ortholog is 100%.
Bootstrap support for A3LSQ4 as seed ortholog is 99%.

Group of orthologs #389. Best score 243 bits
Score difference with first non-orthologous sequence - L.major:83 S.stipitis:27

Q4Q883              	100.00%		A3LMX5              	100.00%
Bootstrap support for Q4Q883 as seed ortholog is 89%.
Bootstrap support for A3LMX5 as seed ortholog is 45%.
Alternative seed ortholog is A3LSV1 (27 bits away from this cluster)

Group of orthologs #390. Best score 243 bits
Score difference with first non-orthologous sequence - L.major:103 S.stipitis:243

Q4Q369              	100.00%		A3LY03              	100.00%
Bootstrap support for Q4Q369 as seed ortholog is 99%.
Bootstrap support for A3LY03 as seed ortholog is 100%.

Group of orthologs #391. Best score 242 bits
Score difference with first non-orthologous sequence - L.major:242 S.stipitis:242

Q4QJ98              	100.00%		A3LTY5              	100.00%
Bootstrap support for Q4QJ98 as seed ortholog is 100%.
Bootstrap support for A3LTY5 as seed ortholog is 100%.

Group of orthologs #392. Best score 241 bits
Score difference with first non-orthologous sequence - L.major:170 S.stipitis:155

Q4QG26              	100.00%		A3LWI9              	100.00%
Bootstrap support for Q4QG26 as seed ortholog is 99%.
Bootstrap support for A3LWI9 as seed ortholog is 100%.

Group of orthologs #393. Best score 240 bits
Score difference with first non-orthologous sequence - L.major:124 S.stipitis:240

Q4Q402              	100.00%		A3LPP7              	100.00%
                    	       		A3LS12              	100.00%
Bootstrap support for Q4Q402 as seed ortholog is 99%.
Bootstrap support for A3LPP7 as seed ortholog is 100%.
Bootstrap support for A3LS12 as seed ortholog is 100%.

Group of orthologs #394. Best score 240 bits
Score difference with first non-orthologous sequence - L.major:240 S.stipitis:240

Q4Q134              	100.00%		A3LT77              	100.00%
Q4Q135              	100.00%		
Bootstrap support for Q4Q134 as seed ortholog is 100%.
Bootstrap support for Q4Q135 as seed ortholog is 100%.
Bootstrap support for A3LT77 as seed ortholog is 100%.

Group of orthologs #395. Best score 240 bits
Score difference with first non-orthologous sequence - L.major:77 S.stipitis:93

Q4Q0X4              	100.00%		A3GG51              	100.00%
Bootstrap support for Q4Q0X4 as seed ortholog is 90%.
Bootstrap support for A3GG51 as seed ortholog is 96%.

Group of orthologs #396. Best score 240 bits
Score difference with first non-orthologous sequence - L.major:240 S.stipitis:240

Q4Q084              	100.00%		A3LMS2              	100.00%
Bootstrap support for Q4Q084 as seed ortholog is 100%.
Bootstrap support for A3LMS2 as seed ortholog is 100%.

Group of orthologs #397. Best score 240 bits
Score difference with first non-orthologous sequence - L.major:240 S.stipitis:240

Q4Q816              	100.00%		A3LMT1              	100.00%
Bootstrap support for Q4Q816 as seed ortholog is 100%.
Bootstrap support for A3LMT1 as seed ortholog is 100%.

Group of orthologs #398. Best score 240 bits
Score difference with first non-orthologous sequence - L.major:240 S.stipitis:240

Q4Q2V8              	100.00%		A3LTA0              	100.00%
Bootstrap support for Q4Q2V8 as seed ortholog is 100%.
Bootstrap support for A3LTA0 as seed ortholog is 100%.

Group of orthologs #399. Best score 240 bits
Score difference with first non-orthologous sequence - L.major:170 S.stipitis:240

Q4QA52              	100.00%		A3LVQ0              	100.00%
Bootstrap support for Q4QA52 as seed ortholog is 99%.
Bootstrap support for A3LVQ0 as seed ortholog is 100%.

Group of orthologs #400. Best score 240 bits
Score difference with first non-orthologous sequence - L.major:240 S.stipitis:240

Q4QE40              	100.00%		A3LYL4              	100.00%
Bootstrap support for Q4QE40 as seed ortholog is 100%.
Bootstrap support for A3LYL4 as seed ortholog is 100%.

Group of orthologs #401. Best score 240 bits
Score difference with first non-orthologous sequence - L.major:240 S.stipitis:240

Q4QGR5              	100.00%		A3LX74              	100.00%
Bootstrap support for Q4QGR5 as seed ortholog is 100%.
Bootstrap support for A3LX74 as seed ortholog is 100%.

Group of orthologs #402. Best score 239 bits
Score difference with first non-orthologous sequence - L.major:239 S.stipitis:239

Q95Z84              	100.00%		A3LYB2              	100.00%
                    	       		A3GHW1              	10.08%
Bootstrap support for Q95Z84 as seed ortholog is 100%.
Bootstrap support for A3LYB2 as seed ortholog is 100%.

Group of orthologs #403. Best score 238 bits
Score difference with first non-orthologous sequence - L.major:238 S.stipitis:238

Q4Q7H4              	100.00%		A3LXW4              	100.00%
Bootstrap support for Q4Q7H4 as seed ortholog is 100%.
Bootstrap support for A3LXW4 as seed ortholog is 100%.

Group of orthologs #404. Best score 238 bits
Score difference with first non-orthologous sequence - L.major:238 S.stipitis:238

Q868B1              	100.00%		A3LVE9              	100.00%
Bootstrap support for Q868B1 as seed ortholog is 100%.
Bootstrap support for A3LVE9 as seed ortholog is 100%.

Group of orthologs #405. Best score 237 bits
Score difference with first non-orthologous sequence - L.major:32 S.stipitis:137

Q4QF76              	100.00%		A3LQ08              	100.00%
Q4QF68              	98.83%		
Q4QF80              	97.66%		
Q4QF74              	80.12%		
Bootstrap support for Q4QF76 as seed ortholog is 90%.
Bootstrap support for A3LQ08 as seed ortholog is 100%.

Group of orthologs #406. Best score 237 bits
Score difference with first non-orthologous sequence - L.major:37 S.stipitis:237

Q4Q5L5              	100.00%		A3LXT8              	100.00%
Q4QEB1              	9.59%		
Bootstrap support for Q4Q5L5 as seed ortholog is 68%.
Alternative seed ortholog is Q4QDF3 (37 bits away from this cluster)
Bootstrap support for A3LXT8 as seed ortholog is 100%.

Group of orthologs #407. Best score 237 bits
Score difference with first non-orthologous sequence - L.major:237 S.stipitis:237

Q4Q0Q0              	100.00%		A3LRZ0              	100.00%
Bootstrap support for Q4Q0Q0 as seed ortholog is 100%.
Bootstrap support for A3LRZ0 as seed ortholog is 100%.

Group of orthologs #408. Best score 237 bits
Score difference with first non-orthologous sequence - L.major:237 S.stipitis:237

E9AF40              	100.00%		A3LTQ1              	100.00%
Bootstrap support for E9AF40 as seed ortholog is 100%.
Bootstrap support for A3LTQ1 as seed ortholog is 100%.

Group of orthologs #409. Best score 237 bits
Score difference with first non-orthologous sequence - L.major:237 S.stipitis:237

Q4Q6V0              	100.00%		A3LWX0              	100.00%
Bootstrap support for Q4Q6V0 as seed ortholog is 100%.
Bootstrap support for A3LWX0 as seed ortholog is 100%.

Group of orthologs #410. Best score 237 bits
Score difference with first non-orthologous sequence - L.major:237 S.stipitis:237

Q4QG60              	100.00%		A3LXR8              	100.00%
Bootstrap support for Q4QG60 as seed ortholog is 100%.
Bootstrap support for A3LXR8 as seed ortholog is 100%.

Group of orthologs #411. Best score 235 bits
Score difference with first non-orthologous sequence - L.major:235 S.stipitis:235

E9ACB3              	100.00%		A3GEX4              	100.00%
Bootstrap support for E9ACB3 as seed ortholog is 100%.
Bootstrap support for A3GEX4 as seed ortholog is 100%.

Group of orthologs #412. Best score 235 bits
Score difference with first non-orthologous sequence - L.major:235 S.stipitis:235

Q4Q2T3              	100.00%		A3LUB1              	100.00%
Bootstrap support for Q4Q2T3 as seed ortholog is 100%.
Bootstrap support for A3LUB1 as seed ortholog is 100%.

Group of orthologs #413. Best score 235 bits
Score difference with first non-orthologous sequence - L.major:132 S.stipitis:93

Q9GNC1              	100.00%		A3GGX4              	100.00%
Bootstrap support for Q9GNC1 as seed ortholog is 100%.
Bootstrap support for A3GGX4 as seed ortholog is 99%.

Group of orthologs #414. Best score 233 bits
Score difference with first non-orthologous sequence - L.major:137 S.stipitis:233

Q4QJG7              	100.00%		A3LR48              	100.00%
                    	       		A3GI90              	18.66%
Bootstrap support for Q4QJG7 as seed ortholog is 99%.
Bootstrap support for A3LR48 as seed ortholog is 100%.

Group of orthologs #415. Best score 233 bits
Score difference with first non-orthologous sequence - L.major:60 S.stipitis:233

Q4QCX7              	100.00%		A3LPQ3              	100.00%
Bootstrap support for Q4QCX7 as seed ortholog is 74%.
Alternative seed ortholog is Q4QFZ3 (60 bits away from this cluster)
Bootstrap support for A3LPQ3 as seed ortholog is 100%.

Group of orthologs #416. Best score 233 bits
Score difference with first non-orthologous sequence - L.major:233 S.stipitis:233

Q4QDX9              	100.00%		A3LTA4              	100.00%
Bootstrap support for Q4QDX9 as seed ortholog is 100%.
Bootstrap support for A3LTA4 as seed ortholog is 100%.

Group of orthologs #417. Best score 232 bits
Score difference with first non-orthologous sequence - L.major:232 S.stipitis:232

E9ACF5              	100.00%		A3LP54              	100.00%
                    	       		A3LUN0              	20.61%
Bootstrap support for E9ACF5 as seed ortholog is 100%.
Bootstrap support for A3LP54 as seed ortholog is 100%.

Group of orthologs #418. Best score 232 bits
Score difference with first non-orthologous sequence - L.major:232 S.stipitis:232

Q4Q1R5              	100.00%		A3LPI7              	100.00%
Bootstrap support for Q4Q1R5 as seed ortholog is 100%.
Bootstrap support for A3LPI7 as seed ortholog is 100%.

Group of orthologs #419. Best score 232 bits
Score difference with first non-orthologous sequence - L.major:232 S.stipitis:232

Q4QIZ4              	100.00%		A3LN62              	100.00%
Bootstrap support for Q4QIZ4 as seed ortholog is 100%.
Bootstrap support for A3LN62 as seed ortholog is 100%.

Group of orthologs #420. Best score 232 bits
Score difference with first non-orthologous sequence - L.major:232 S.stipitis:232

Q4Q969              	100.00%		A3LY74              	100.00%
Bootstrap support for Q4Q969 as seed ortholog is 100%.
Bootstrap support for A3LY74 as seed ortholog is 100%.

Group of orthologs #421. Best score 231 bits
Score difference with first non-orthologous sequence - L.major:103 S.stipitis:66

P22045              	100.00%		A3LZK0              	100.00%
Q4Q5N9              	28.24%		A3LRU9              	17.49%
                    	       		A3LSD4              	11.20%
Bootstrap support for P22045 as seed ortholog is 99%.
Bootstrap support for A3LZK0 as seed ortholog is 96%.

Group of orthologs #422. Best score 230 bits
Score difference with first non-orthologous sequence - L.major:230 S.stipitis:230

Q4Q5P8              	100.00%		A3LWM9              	100.00%
Bootstrap support for Q4Q5P8 as seed ortholog is 100%.
Bootstrap support for A3LWM9 as seed ortholog is 100%.

Group of orthologs #423. Best score 229 bits
Score difference with first non-orthologous sequence - L.major:229 S.stipitis:229

E9ACY1              	100.00%		A3LST9              	100.00%
                    	       		A3LZ17              	36.05%
                    	       		A3LZ45              	21.66%
Bootstrap support for E9ACY1 as seed ortholog is 100%.
Bootstrap support for A3LST9 as seed ortholog is 100%.

Group of orthologs #424. Best score 229 bits
Score difference with first non-orthologous sequence - L.major:229 S.stipitis:229

Q4QEK4              	100.00%		A3LPV0              	100.00%
Bootstrap support for Q4QEK4 as seed ortholog is 100%.
Bootstrap support for A3LPV0 as seed ortholog is 100%.

Group of orthologs #425. Best score 228 bits
Score difference with first non-orthologous sequence - L.major:228 S.stipitis:131

E9AEY8              	100.00%		A3LTV2              	100.00%
Bootstrap support for E9AEY8 as seed ortholog is 100%.
Bootstrap support for A3LTV2 as seed ortholog is 99%.

Group of orthologs #426. Best score 228 bits
Score difference with first non-orthologous sequence - L.major:24 S.stipitis:98

E9AF07              	100.00%		A3LW51              	100.00%
Bootstrap support for E9AF07 as seed ortholog is 67%.
Alternative seed ortholog is Q4QFG6 (24 bits away from this cluster)
Bootstrap support for A3LW51 as seed ortholog is 99%.

Group of orthologs #427. Best score 227 bits
Score difference with first non-orthologous sequence - L.major:227 S.stipitis:109

Q4QGH6              	100.00%		A3LND8              	100.00%
                    	       		A3LSP2              	78.10%
                    	       		A3LV14              	36.72%
                    	       		A3LT83              	36.38%
                    	       		A3LV12              	35.52%
                    	       		A3LT81              	34.14%
                    	       		A3LT82              	33.97%
                    	       		A3LTL6              	33.10%
                    	       		A3LV13              	28.79%
                    	       		A3GH18              	14.14%
Bootstrap support for Q4QGH6 as seed ortholog is 100%.
Bootstrap support for A3LND8 as seed ortholog is 99%.

Group of orthologs #428. Best score 227 bits
Score difference with first non-orthologous sequence - L.major:41 S.stipitis:69

O02614              	100.00%		A3LPG3              	100.00%
Q4Q424              	29.25%		
Q4QBH1              	6.80%		
Bootstrap support for O02614 as seed ortholog is 94%.
Bootstrap support for A3LPG3 as seed ortholog is 99%.

Group of orthologs #429. Best score 227 bits
Score difference with first non-orthologous sequence - L.major:227 S.stipitis:227

E9AEI4              	100.00%		A3LRZ6              	100.00%
Bootstrap support for E9AEI4 as seed ortholog is 100%.
Bootstrap support for A3LRZ6 as seed ortholog is 100%.

Group of orthologs #430. Best score 226 bits
Score difference with first non-orthologous sequence - L.major:226 S.stipitis:226

Q4QHU0              	100.00%		A3LR59              	100.00%
Bootstrap support for Q4QHU0 as seed ortholog is 100%.
Bootstrap support for A3LR59 as seed ortholog is 100%.

Group of orthologs #431. Best score 225 bits
Score difference with first non-orthologous sequence - L.major:225 S.stipitis:225

Q4Q3Z6              	100.00%		A3GI66              	100.00%
Bootstrap support for Q4Q3Z6 as seed ortholog is 100%.
Bootstrap support for A3GI66 as seed ortholog is 100%.

Group of orthologs #432. Best score 225 bits
Score difference with first non-orthologous sequence - L.major:225 S.stipitis:225

Q4QC13              	100.00%		A3LS43              	100.00%
Bootstrap support for Q4QC13 as seed ortholog is 100%.
Bootstrap support for A3LS43 as seed ortholog is 100%.

Group of orthologs #433. Best score 224 bits
Score difference with first non-orthologous sequence - L.major:224 S.stipitis:224

Q4Q561              	100.00%		A3LPM2              	100.00%
Bootstrap support for Q4Q561 as seed ortholog is 100%.
Bootstrap support for A3LPM2 as seed ortholog is 100%.

Group of orthologs #434. Best score 224 bits
Score difference with first non-orthologous sequence - L.major:144 S.stipitis:180

Q4Q455              	100.00%		A3LUM6              	100.00%
Bootstrap support for Q4Q455 as seed ortholog is 99%.
Bootstrap support for A3LUM6 as seed ortholog is 99%.

Group of orthologs #435. Best score 224 bits
Score difference with first non-orthologous sequence - L.major:224 S.stipitis:224

Q4QGW6              	100.00%		A3GFK8              	100.00%
Bootstrap support for Q4QGW6 as seed ortholog is 100%.
Bootstrap support for A3GFK8 as seed ortholog is 100%.

Group of orthologs #436. Best score 223 bits
Score difference with first non-orthologous sequence - L.major:159 S.stipitis:28

Q4QAR5              	100.00%		A3GG58              	100.00%
Bootstrap support for Q4QAR5 as seed ortholog is 99%.
Bootstrap support for A3GG58 as seed ortholog is 72%.
Alternative seed ortholog is A3LZS0 (28 bits away from this cluster)

Group of orthologs #437. Best score 223 bits
Score difference with first non-orthologous sequence - L.major:89 S.stipitis:223

Q4QHF5              	100.00%		A3GGN0              	100.00%
Bootstrap support for Q4QHF5 as seed ortholog is 93%.
Bootstrap support for A3GGN0 as seed ortholog is 100%.

Group of orthologs #438. Best score 223 bits
Score difference with first non-orthologous sequence - L.major:223 S.stipitis:223

Q4QHE5              	100.00%		A3GHA2              	100.00%
Bootstrap support for Q4QHE5 as seed ortholog is 100%.
Bootstrap support for A3GHA2 as seed ortholog is 100%.

Group of orthologs #439. Best score 223 bits
Score difference with first non-orthologous sequence - L.major:38 S.stipitis:84

Q9N2N1              	100.00%		A3LT96              	100.00%
Bootstrap support for Q9N2N1 as seed ortholog is 89%.
Bootstrap support for A3LT96 as seed ortholog is 99%.

Group of orthologs #440. Best score 223 bits
Score difference with first non-orthologous sequence - L.major:223 S.stipitis:223

Q4QH56              	100.00%		A3M057              	100.00%
Bootstrap support for Q4QH56 as seed ortholog is 100%.
Bootstrap support for A3M057 as seed ortholog is 100%.

Group of orthologs #441. Best score 222 bits
Score difference with first non-orthologous sequence - L.major:222 S.stipitis:222

E9ADB9              	100.00%		A3LWF9              	100.00%
Bootstrap support for E9ADB9 as seed ortholog is 100%.
Bootstrap support for A3LWF9 as seed ortholog is 100%.

Group of orthologs #442. Best score 222 bits
Score difference with first non-orthologous sequence - L.major:222 S.stipitis:222

Q4Q4U6              	100.00%		A3LWM7              	100.00%
Bootstrap support for Q4Q4U6 as seed ortholog is 100%.
Bootstrap support for A3LWM7 as seed ortholog is 100%.

Group of orthologs #443. Best score 222 bits
Score difference with first non-orthologous sequence - L.major:222 S.stipitis:222

Q4QFV0              	100.00%		A3LVC4              	100.00%
Bootstrap support for Q4QFV0 as seed ortholog is 100%.
Bootstrap support for A3LVC4 as seed ortholog is 100%.

Group of orthologs #444. Best score 221 bits
Score difference with first non-orthologous sequence - L.major:221 S.stipitis:62

Q4QF38              	100.00%		A3LU10              	100.00%
Bootstrap support for Q4QF38 as seed ortholog is 100%.
Bootstrap support for A3LU10 as seed ortholog is 83%.

Group of orthologs #445. Best score 220 bits
Score difference with first non-orthologous sequence - L.major:220 S.stipitis:220

Q4QFX1              	100.00%		A3LNI3              	100.00%
Bootstrap support for Q4QFX1 as seed ortholog is 100%.
Bootstrap support for A3LNI3 as seed ortholog is 100%.

Group of orthologs #446. Best score 220 bits
Score difference with first non-orthologous sequence - L.major:220 S.stipitis:220

Q4QBL1              	100.00%		A3LU92              	100.00%
Bootstrap support for Q4QBL1 as seed ortholog is 100%.
Bootstrap support for A3LU92 as seed ortholog is 100%.

Group of orthologs #447. Best score 218 bits
Score difference with first non-orthologous sequence - L.major:80 S.stipitis:218

Q4Q2S8              	100.00%		A3LMT4              	100.00%
Bootstrap support for Q4Q2S8 as seed ortholog is 93%.
Bootstrap support for A3LMT4 as seed ortholog is 100%.

Group of orthologs #448. Best score 218 bits
Score difference with first non-orthologous sequence - L.major:218 S.stipitis:218

Q4Q5J3              	100.00%		A3LMY4              	100.00%
Bootstrap support for Q4Q5J3 as seed ortholog is 100%.
Bootstrap support for A3LMY4 as seed ortholog is 100%.

Group of orthologs #449. Best score 218 bits
Score difference with first non-orthologous sequence - L.major:218 S.stipitis:218

E9AC56              	100.00%		A3LXK3              	100.00%
Bootstrap support for E9AC56 as seed ortholog is 100%.
Bootstrap support for A3LXK3 as seed ortholog is 100%.

Group of orthologs #450. Best score 218 bits
Score difference with first non-orthologous sequence - L.major:218 S.stipitis:118

Q4Q9L8              	100.00%		A3LQT9              	100.00%
Bootstrap support for Q4Q9L8 as seed ortholog is 100%.
Bootstrap support for A3LQT9 as seed ortholog is 99%.

Group of orthologs #451. Best score 218 bits
Score difference with first non-orthologous sequence - L.major:218 S.stipitis:121

Q6XFB3              	100.00%		A3LYW1              	100.00%
Bootstrap support for Q6XFB3 as seed ortholog is 100%.
Bootstrap support for A3LYW1 as seed ortholog is 99%.

Group of orthologs #452. Best score 217 bits
Score difference with first non-orthologous sequence - L.major:217 S.stipitis:217

Q4Q1J8              	100.00%		A3LRH9              	100.00%
Q4Q232              	5.95%		
Bootstrap support for Q4Q1J8 as seed ortholog is 100%.
Bootstrap support for A3LRH9 as seed ortholog is 100%.

Group of orthologs #453. Best score 217 bits
Score difference with first non-orthologous sequence - L.major:158 S.stipitis:26

Q4Q3K2              	100.00%		A3LQQ1              	100.00%
Bootstrap support for Q4Q3K2 as seed ortholog is 100%.
Bootstrap support for A3LQQ1 as seed ortholog is 77%.

Group of orthologs #454. Best score 217 bits
Score difference with first non-orthologous sequence - L.major:151 S.stipitis:140

Q4Q9H4              	100.00%		A3GFU4              	100.00%
Bootstrap support for Q4Q9H4 as seed ortholog is 100%.
Bootstrap support for A3GFU4 as seed ortholog is 100%.

Group of orthologs #455. Best score 217 bits
Score difference with first non-orthologous sequence - L.major:26 S.stipitis:217

Q4Q431              	100.00%		A3M0L9              	100.00%
Bootstrap support for Q4Q431 as seed ortholog is 81%.
Bootstrap support for A3M0L9 as seed ortholog is 100%.

Group of orthologs #456. Best score 217 bits
Score difference with first non-orthologous sequence - L.major:217 S.stipitis:217

Q4QFV4              	100.00%		A3LPU5              	100.00%
Bootstrap support for Q4QFV4 as seed ortholog is 100%.
Bootstrap support for A3LPU5 as seed ortholog is 100%.

Group of orthologs #457. Best score 216 bits
Score difference with first non-orthologous sequence - L.major:139 S.stipitis:216

Q4QI58              	100.00%		A3LZA2              	100.00%
Bootstrap support for Q4QI58 as seed ortholog is 99%.
Bootstrap support for A3LZA2 as seed ortholog is 100%.

Group of orthologs #458. Best score 215 bits
Score difference with first non-orthologous sequence - L.major:163 S.stipitis:215

E9ADE6              	100.00%		A3LQF9              	100.00%
Bootstrap support for E9ADE6 as seed ortholog is 99%.
Bootstrap support for A3LQF9 as seed ortholog is 100%.

Group of orthologs #459. Best score 215 bits
Score difference with first non-orthologous sequence - L.major:215 S.stipitis:215

Q4QA84              	100.00%		A3GGY9              	100.00%
Bootstrap support for Q4QA84 as seed ortholog is 100%.
Bootstrap support for A3GGY9 as seed ortholog is 100%.

Group of orthologs #460. Best score 215 bits
Score difference with first non-orthologous sequence - L.major:102 S.stipitis:102

Q4QHT2              	100.00%		A3GH66              	100.00%
Bootstrap support for Q4QHT2 as seed ortholog is 100%.
Bootstrap support for A3GH66 as seed ortholog is 100%.

Group of orthologs #461. Best score 214 bits
Score difference with first non-orthologous sequence - L.major:108 S.stipitis:153

Q4Q0T1              	100.00%		A3LNI4              	100.00%
Bootstrap support for Q4Q0T1 as seed ortholog is 99%.
Bootstrap support for A3LNI4 as seed ortholog is 99%.

Group of orthologs #462. Best score 214 bits
Score difference with first non-orthologous sequence - L.major:214 S.stipitis:103

E9AE92              	100.00%		A3LTF5              	100.00%
Bootstrap support for E9AE92 as seed ortholog is 100%.
Bootstrap support for A3LTF5 as seed ortholog is 99%.

Group of orthologs #463. Best score 214 bits
Score difference with first non-orthologous sequence - L.major:61 S.stipitis:50

Q4QEJ1              	100.00%		A3GGL4              	100.00%
Bootstrap support for Q4QEJ1 as seed ortholog is 99%.
Bootstrap support for A3GGL4 as seed ortholog is 99%.

Group of orthologs #464. Best score 213 bits
Score difference with first non-orthologous sequence - L.major:213 S.stipitis:213

Q4Q884              	100.00%		A3LMX2              	100.00%
Bootstrap support for Q4Q884 as seed ortholog is 100%.
Bootstrap support for A3LMX2 as seed ortholog is 100%.

Group of orthologs #465. Best score 213 bits
Score difference with first non-orthologous sequence - L.major:116 S.stipitis:130

Q4QJK0              	100.00%		A3LTA2              	100.00%
Bootstrap support for Q4QJK0 as seed ortholog is 99%.
Bootstrap support for A3LTA2 as seed ortholog is 100%.

Group of orthologs #466. Best score 212 bits
Score difference with first non-orthologous sequence - L.major:212 S.stipitis:212

Q4FX73              	100.00%		A3LUW5              	100.00%
                    	       		A3LX67              	90.53%
Bootstrap support for Q4FX73 as seed ortholog is 100%.
Bootstrap support for A3LUW5 as seed ortholog is 100%.

Group of orthologs #467. Best score 212 bits
Score difference with first non-orthologous sequence - L.major:212 S.stipitis:212

Q4Q2N6              	100.00%		A3GG05              	100.00%
Bootstrap support for Q4Q2N6 as seed ortholog is 100%.
Bootstrap support for A3GG05 as seed ortholog is 100%.

Group of orthologs #468. Best score 212 bits
Score difference with first non-orthologous sequence - L.major:212 S.stipitis:212

Q4Q8H1              	100.00%		A3LQJ1              	100.00%
Bootstrap support for Q4Q8H1 as seed ortholog is 100%.
Bootstrap support for A3LQJ1 as seed ortholog is 100%.

Group of orthologs #469. Best score 212 bits
Score difference with first non-orthologous sequence - L.major:212 S.stipitis:212

Q4Q5C3              	100.00%		A3LU31              	100.00%
Bootstrap support for Q4Q5C3 as seed ortholog is 100%.
Bootstrap support for A3LU31 as seed ortholog is 100%.

Group of orthologs #470. Best score 212 bits
Score difference with first non-orthologous sequence - L.major:212 S.stipitis:212

Q4Q2T0              	100.00%		A3LYR0              	100.00%
Bootstrap support for Q4Q2T0 as seed ortholog is 100%.
Bootstrap support for A3LYR0 as seed ortholog is 100%.

Group of orthologs #471. Best score 212 bits
Score difference with first non-orthologous sequence - L.major:108 S.stipitis:86

Q9NED4              	100.00%		A3LZD6              	100.00%
Bootstrap support for Q9NED4 as seed ortholog is 100%.
Bootstrap support for A3LZD6 as seed ortholog is 99%.

Group of orthologs #472. Best score 211 bits
Score difference with first non-orthologous sequence - L.major:105 S.stipitis:211

E9ADN0              	100.00%		A3GI83              	100.00%
E9ADI2              	49.62%		A3GEX0              	25.97%
                    	       		A3LTY9              	25.45%
Bootstrap support for E9ADN0 as seed ortholog is 99%.
Bootstrap support for A3GI83 as seed ortholog is 100%.

Group of orthologs #473. Best score 211 bits
Score difference with first non-orthologous sequence - L.major:99 S.stipitis:92

Q4Q1Y6              	100.00%		A3LR28              	100.00%
Bootstrap support for Q4Q1Y6 as seed ortholog is 99%.
Bootstrap support for A3LR28 as seed ortholog is 98%.

Group of orthologs #474. Best score 210 bits
Score difference with first non-orthologous sequence - L.major:81 S.stipitis:210

Q4Q687              	100.00%		A3LS11              	100.00%
Bootstrap support for Q4Q687 as seed ortholog is 96%.
Bootstrap support for A3LS11 as seed ortholog is 100%.

Group of orthologs #475. Best score 210 bits
Score difference with first non-orthologous sequence - L.major:51 S.stipitis:210

E9AEU9              	100.00%		A3M0D7              	100.00%
Bootstrap support for E9AEU9 as seed ortholog is 95%.
Bootstrap support for A3M0D7 as seed ortholog is 100%.

Group of orthologs #476. Best score 210 bits
Score difference with first non-orthologous sequence - L.major:210 S.stipitis:210

Q4Q459              	100.00%		A3LVP9              	100.00%
Bootstrap support for Q4Q459 as seed ortholog is 100%.
Bootstrap support for A3LVP9 as seed ortholog is 100%.

Group of orthologs #477. Best score 210 bits
Score difference with first non-orthologous sequence - L.major:210 S.stipitis:210

Q4Q882              	100.00%		A3LVM9              	100.00%
Bootstrap support for Q4Q882 as seed ortholog is 100%.
Bootstrap support for A3LVM9 as seed ortholog is 100%.

Group of orthologs #478. Best score 209 bits
Score difference with first non-orthologous sequence - L.major:209 S.stipitis:209

Q4Q1V1              	100.00%		A3LRQ6              	100.00%
Q4QIM3              	99.43%		
Bootstrap support for Q4Q1V1 as seed ortholog is 100%.
Bootstrap support for A3LRQ6 as seed ortholog is 100%.

Group of orthologs #479. Best score 209 bits
Score difference with first non-orthologous sequence - L.major:66 S.stipitis:209

Q4QCX5              	100.00%		A3LQ74              	100.00%
Bootstrap support for Q4QCX5 as seed ortholog is 90%.
Bootstrap support for A3LQ74 as seed ortholog is 100%.

Group of orthologs #480. Best score 209 bits
Score difference with first non-orthologous sequence - L.major:27 S.stipitis:209

Q4QD19              	100.00%		A3LUH7              	100.00%
Bootstrap support for Q4QD19 as seed ortholog is 79%.
Bootstrap support for A3LUH7 as seed ortholog is 100%.

Group of orthologs #481. Best score 209 bits
Score difference with first non-orthologous sequence - L.major:209 S.stipitis:209

Q4QAP8              	100.00%		A3LZL0              	100.00%
Bootstrap support for Q4QAP8 as seed ortholog is 100%.
Bootstrap support for A3LZL0 as seed ortholog is 100%.

Group of orthologs #482. Best score 208 bits
Score difference with first non-orthologous sequence - L.major:208 S.stipitis:208

Q4QIP1              	100.00%		A3GHF0              	100.00%
                    	       		A3GFN9              	86.87%
Bootstrap support for Q4QIP1 as seed ortholog is 100%.
Bootstrap support for A3GHF0 as seed ortholog is 100%.

Group of orthologs #483. Best score 208 bits
Score difference with first non-orthologous sequence - L.major:208 S.stipitis:208

Q4Q8V5              	100.00%		A3GEZ0              	100.00%
Bootstrap support for Q4Q8V5 as seed ortholog is 100%.
Bootstrap support for A3GEZ0 as seed ortholog is 100%.

Group of orthologs #484. Best score 208 bits
Score difference with first non-orthologous sequence - L.major:208 S.stipitis:208

Q4Q8W8              	100.00%		A3LQD7              	100.00%
Bootstrap support for Q4Q8W8 as seed ortholog is 100%.
Bootstrap support for A3LQD7 as seed ortholog is 100%.

Group of orthologs #485. Best score 208 bits
Score difference with first non-orthologous sequence - L.major:153 S.stipitis:65

Q4Q4F7              	100.00%		P22144              	100.00%
Bootstrap support for Q4Q4F7 as seed ortholog is 99%.
Bootstrap support for P22144 as seed ortholog is 96%.

Group of orthologs #486. Best score 207 bits
Score difference with first non-orthologous sequence - L.major:207 S.stipitis:207

Q9NE83              	100.00%		A3GGD3              	100.00%
E9AF23              	100.00%		
Bootstrap support for Q9NE83 as seed ortholog is 100%.
Bootstrap support for E9AF23 as seed ortholog is 100%.
Bootstrap support for A3GGD3 as seed ortholog is 100%.

Group of orthologs #487. Best score 207 bits
Score difference with first non-orthologous sequence - L.major:112 S.stipitis:207

Q4Q3G0              	100.00%		A3GFK3              	100.00%
Bootstrap support for Q4Q3G0 as seed ortholog is 99%.
Bootstrap support for A3GFK3 as seed ortholog is 100%.

Group of orthologs #488. Best score 207 bits
Score difference with first non-orthologous sequence - L.major:48 S.stipitis:58

E9ACV0              	100.00%		A3M0I2              	100.00%
Bootstrap support for E9ACV0 as seed ortholog is 86%.
Bootstrap support for A3M0I2 as seed ortholog is 91%.

Group of orthologs #489. Best score 207 bits
Score difference with first non-orthologous sequence - L.major:207 S.stipitis:207

Q4Q3M1              	100.00%		A3LUZ2              	100.00%
Bootstrap support for Q4Q3M1 as seed ortholog is 100%.
Bootstrap support for A3LUZ2 as seed ortholog is 100%.

Group of orthologs #490. Best score 207 bits
Score difference with first non-orthologous sequence - L.major:207 S.stipitis:207

Q4QFZ2              	100.00%		A3LQE6              	100.00%
Bootstrap support for Q4QFZ2 as seed ortholog is 100%.
Bootstrap support for A3LQE6 as seed ortholog is 100%.

Group of orthologs #491. Best score 206 bits
Score difference with first non-orthologous sequence - L.major:206 S.stipitis:206

Q4Q3A1              	100.00%		A3LVF9              	100.00%
Bootstrap support for Q4Q3A1 as seed ortholog is 100%.
Bootstrap support for A3LVF9 as seed ortholog is 100%.

Group of orthologs #492. Best score 206 bits
Score difference with first non-orthologous sequence - L.major:206 S.stipitis:206

Q9U1E1              	100.00%		A3LVN3              	100.00%
Bootstrap support for Q9U1E1 as seed ortholog is 100%.
Bootstrap support for A3LVN3 as seed ortholog is 100%.

Group of orthologs #493. Best score 205 bits
Score difference with first non-orthologous sequence - L.major:205 S.stipitis:205

Q4QD77              	100.00%		A3GI71              	100.00%
Q4QD80              	9.00%		
Q4QD79              	8.60%		
Q4QD78              	7.97%		
Q4QD82              	6.16%		
Bootstrap support for Q4QD77 as seed ortholog is 100%.
Bootstrap support for A3GI71 as seed ortholog is 100%.

Group of orthologs #494. Best score 205 bits
Score difference with first non-orthologous sequence - L.major:205 S.stipitis:205

Q4QHH6              	100.00%		A3LRV4              	100.00%
                    	       		A3LSN7              	15.64%
                    	       		A3GIE7              	14.71%
Bootstrap support for Q4QHH6 as seed ortholog is 100%.
Bootstrap support for A3LRV4 as seed ortholog is 100%.

Group of orthologs #495. Best score 205 bits
Score difference with first non-orthologous sequence - L.major:205 S.stipitis:205

E9ACZ6              	100.00%		A3LY31              	100.00%
Bootstrap support for E9ACZ6 as seed ortholog is 100%.
Bootstrap support for A3LY31 as seed ortholog is 100%.

Group of orthologs #496. Best score 205 bits
Score difference with first non-orthologous sequence - L.major:205 S.stipitis:107

Q4Q8W4              	100.00%		A3LRU7              	100.00%
Bootstrap support for Q4Q8W4 as seed ortholog is 100%.
Bootstrap support for A3LRU7 as seed ortholog is 99%.

Group of orthologs #497. Best score 204 bits
Score difference with first non-orthologous sequence - L.major:204 S.stipitis:204

Q4Q0M3              	100.00%		A3GHE2              	100.00%
Bootstrap support for Q4Q0M3 as seed ortholog is 100%.
Bootstrap support for A3GHE2 as seed ortholog is 100%.

Group of orthologs #498. Best score 204 bits
Score difference with first non-orthologous sequence - L.major:204 S.stipitis:204

Q4Q4A0              	100.00%		A3LP59              	100.00%
Bootstrap support for Q4Q4A0 as seed ortholog is 100%.
Bootstrap support for A3LP59 as seed ortholog is 100%.

Group of orthologs #499. Best score 204 bits
Score difference with first non-orthologous sequence - L.major:137 S.stipitis:204

Q4Q0Z3              	100.00%		A3LUK4              	100.00%
Bootstrap support for Q4Q0Z3 as seed ortholog is 98%.
Bootstrap support for A3LUK4 as seed ortholog is 100%.

Group of orthologs #500. Best score 203 bits
Score difference with first non-orthologous sequence - L.major:203 S.stipitis:203

E9AFW0              	100.00%		A3LP40              	100.00%
Bootstrap support for E9AFW0 as seed ortholog is 100%.
Bootstrap support for A3LP40 as seed ortholog is 100%.

Group of orthologs #501. Best score 203 bits
Score difference with first non-orthologous sequence - L.major:203 S.stipitis:203

E9ADU1              	100.00%		A3LWE2              	100.00%
Bootstrap support for E9ADU1 as seed ortholog is 100%.
Bootstrap support for A3LWE2 as seed ortholog is 100%.

Group of orthologs #502. Best score 203 bits
Score difference with first non-orthologous sequence - L.major:203 S.stipitis:203

Q4QIE7              	100.00%		A3LQH3              	100.00%
Bootstrap support for Q4QIE7 as seed ortholog is 100%.
Bootstrap support for A3LQH3 as seed ortholog is 100%.

Group of orthologs #503. Best score 202 bits
Score difference with first non-orthologous sequence - L.major:202 S.stipitis:37

Q4QDZ1              	100.00%		A3LYW7              	100.00%
                    	       		A3LY20              	44.99%
Bootstrap support for Q4QDZ1 as seed ortholog is 100%.
Bootstrap support for A3LYW7 as seed ortholog is 74%.
Alternative seed ortholog is A3LS85 (37 bits away from this cluster)

Group of orthologs #504. Best score 202 bits
Score difference with first non-orthologous sequence - L.major:202 S.stipitis:202

Q4Q059              	100.00%		A3LSL2              	100.00%
Bootstrap support for Q4Q059 as seed ortholog is 100%.
Bootstrap support for A3LSL2 as seed ortholog is 100%.

Group of orthologs #505. Best score 202 bits
Score difference with first non-orthologous sequence - L.major:202 S.stipitis:202

Q4QCH3              	100.00%		A3GG79              	100.00%
Bootstrap support for Q4QCH3 as seed ortholog is 100%.
Bootstrap support for A3GG79 as seed ortholog is 100%.

Group of orthologs #506. Best score 202 bits
Score difference with first non-orthologous sequence - L.major:202 S.stipitis:202

Q4Q7T4              	100.00%		A3LRV8              	100.00%
Bootstrap support for Q4Q7T4 as seed ortholog is 100%.
Bootstrap support for A3LRV8 as seed ortholog is 100%.

Group of orthologs #507. Best score 202 bits
Score difference with first non-orthologous sequence - L.major:68 S.stipitis:95

Q4QAV6              	100.00%		A3LV40              	100.00%
Bootstrap support for Q4QAV6 as seed ortholog is 93%.
Bootstrap support for A3LV40 as seed ortholog is 99%.

Group of orthologs #508. Best score 202 bits
Score difference with first non-orthologous sequence - L.major:202 S.stipitis:202

Q4QGS7              	100.00%		A3LPM8              	100.00%
Bootstrap support for Q4QGS7 as seed ortholog is 100%.
Bootstrap support for A3LPM8 as seed ortholog is 100%.

Group of orthologs #509. Best score 202 bits
Score difference with first non-orthologous sequence - L.major:53 S.stipitis:46

Q4QJ67              	100.00%		A3LQ11              	100.00%
Bootstrap support for Q4QJ67 as seed ortholog is 96%.
Bootstrap support for A3LQ11 as seed ortholog is 96%.

Group of orthologs #510. Best score 201 bits
Score difference with first non-orthologous sequence - L.major:201 S.stipitis:201

Q4QJ37              	100.00%		A3GHI8              	100.00%
Q4QJ39              	100.00%		
Bootstrap support for Q4QJ37 as seed ortholog is 100%.
Bootstrap support for Q4QJ39 as seed ortholog is 100%.
Bootstrap support for A3GHI8 as seed ortholog is 100%.

Group of orthologs #511. Best score 201 bits
Score difference with first non-orthologous sequence - L.major:201 S.stipitis:201

Q4QI04              	100.00%		A3LTK8              	100.00%
                    	       		A3M0E1              	6.94%
Bootstrap support for Q4QI04 as seed ortholog is 100%.
Bootstrap support for A3LTK8 as seed ortholog is 100%.

Group of orthologs #512. Best score 201 bits
Score difference with first non-orthologous sequence - L.major:201 S.stipitis:201

E9AD51              	100.00%		A3GHN5              	100.00%
Bootstrap support for E9AD51 as seed ortholog is 100%.
Bootstrap support for A3GHN5 as seed ortholog is 100%.

Group of orthologs #513. Best score 201 bits
Score difference with first non-orthologous sequence - L.major:201 S.stipitis:201

Q4QH67              	100.00%		A3LS90              	100.00%
Bootstrap support for Q4QH67 as seed ortholog is 100%.
Bootstrap support for A3LS90 as seed ortholog is 100%.

Group of orthologs #514. Best score 201 bits
Score difference with first non-orthologous sequence - L.major:201 S.stipitis:201

Q4QEP9              	100.00%		A3LVB0              	100.00%
Bootstrap support for Q4QEP9 as seed ortholog is 100%.
Bootstrap support for A3LVB0 as seed ortholog is 100%.

Group of orthologs #515. Best score 200 bits
Score difference with first non-orthologous sequence - L.major:59 S.stipitis:13

Q4QBR9              	100.00%		A3LT66              	100.00%
Q4QBS0              	24.37%		
Q4QFH9              	14.97%		
Bootstrap support for Q4QBR9 as seed ortholog is 94%.
Bootstrap support for A3LT66 as seed ortholog is 66%.
Alternative seed ortholog is A3GF86 (13 bits away from this cluster)

Group of orthologs #516. Best score 200 bits
Score difference with first non-orthologous sequence - L.major:31 S.stipitis:159

Q4Q7L5              	100.00%		A3LRF5              	100.00%
Bootstrap support for Q4Q7L5 as seed ortholog is 78%.
Bootstrap support for A3LRF5 as seed ortholog is 100%.

Group of orthologs #517. Best score 200 bits
Score difference with first non-orthologous sequence - L.major:200 S.stipitis:200

Q4QC89              	100.00%		A3LQK6              	100.00%
Bootstrap support for Q4QC89 as seed ortholog is 100%.
Bootstrap support for A3LQK6 as seed ortholog is 100%.

Group of orthologs #518. Best score 200 bits
Score difference with first non-orthologous sequence - L.major:200 S.stipitis:200

Q4Q4Z3              	100.00%		A3LYA3              	100.00%
Bootstrap support for Q4Q4Z3 as seed ortholog is 100%.
Bootstrap support for A3LYA3 as seed ortholog is 100%.

Group of orthologs #519. Best score 200 bits
Score difference with first non-orthologous sequence - L.major:200 S.stipitis:200

Q4QBK9              	100.00%		A3LW04              	100.00%
Bootstrap support for Q4QBK9 as seed ortholog is 100%.
Bootstrap support for A3LW04 as seed ortholog is 100%.

Group of orthologs #520. Best score 199 bits
Score difference with first non-orthologous sequence - L.major:199 S.stipitis:199

E9AFH8              	100.00%		A3GI99              	100.00%
Bootstrap support for E9AFH8 as seed ortholog is 100%.
Bootstrap support for A3GI99 as seed ortholog is 100%.

Group of orthologs #521. Best score 199 bits
Score difference with first non-orthologous sequence - L.major:199 S.stipitis:131

E9AFK3              	100.00%		A3LT69              	100.00%
Bootstrap support for E9AFK3 as seed ortholog is 100%.
Bootstrap support for A3LT69 as seed ortholog is 100%.

Group of orthologs #522. Best score 199 bits
Score difference with first non-orthologous sequence - L.major:199 S.stipitis:199

Q4QI30              	100.00%		A3LQB2              	100.00%
Bootstrap support for Q4QI30 as seed ortholog is 100%.
Bootstrap support for A3LQB2 as seed ortholog is 100%.

Group of orthologs #523. Best score 199 bits
Score difference with first non-orthologous sequence - L.major:199 S.stipitis:199

Q4QIP6              	100.00%		A3LSG3              	100.00%
Bootstrap support for Q4QIP6 as seed ortholog is 100%.
Bootstrap support for A3LSG3 as seed ortholog is 100%.

Group of orthologs #524. Best score 198 bits
Score difference with first non-orthologous sequence - L.major:198 S.stipitis:198

Q4QE06              	100.00%		A3LWT7              	100.00%
Bootstrap support for Q4QE06 as seed ortholog is 100%.
Bootstrap support for A3LWT7 as seed ortholog is 100%.

Group of orthologs #525. Best score 197 bits
Score difference with first non-orthologous sequence - L.major:197 S.stipitis:197

Q4QAA9              	100.00%		A3GHB0              	100.00%
Bootstrap support for Q4QAA9 as seed ortholog is 100%.
Bootstrap support for A3GHB0 as seed ortholog is 100%.

Group of orthologs #526. Best score 197 bits
Score difference with first non-orthologous sequence - L.major:197 S.stipitis:197

Q4QAE1              	100.00%		A3LYT2              	100.00%
Bootstrap support for Q4QAE1 as seed ortholog is 100%.
Bootstrap support for A3LYT2 as seed ortholog is 100%.

Group of orthologs #527. Best score 196 bits
Score difference with first non-orthologous sequence - L.major:196 S.stipitis:196

Q4Q901              	100.00%		A3LYE8              	100.00%
Bootstrap support for Q4Q901 as seed ortholog is 100%.
Bootstrap support for A3LYE8 as seed ortholog is 100%.

Group of orthologs #528. Best score 196 bits
Score difference with first non-orthologous sequence - L.major:196 S.stipitis:196

Q4QIQ3              	100.00%		A3LQ26              	100.00%
Bootstrap support for Q4QIQ3 as seed ortholog is 100%.
Bootstrap support for A3LQ26 as seed ortholog is 100%.

Group of orthologs #529. Best score 196 bits
Score difference with first non-orthologous sequence - L.major:53 S.stipitis:196

Q4QFL6              	100.00%		A3LZ97              	100.00%
Bootstrap support for Q4QFL6 as seed ortholog is 88%.
Bootstrap support for A3LZ97 as seed ortholog is 100%.

Group of orthologs #530. Best score 195 bits
Score difference with first non-orthologous sequence - L.major:195 S.stipitis:195

P25204              	100.00%		A3LT20              	100.00%
Bootstrap support for P25204 as seed ortholog is 100%.
Bootstrap support for A3LT20 as seed ortholog is 100%.

Group of orthologs #531. Best score 195 bits
Score difference with first non-orthologous sequence - L.major:195 S.stipitis:195

Q4Q580              	100.00%		A3LNC2              	100.00%
Bootstrap support for Q4Q580 as seed ortholog is 100%.
Bootstrap support for A3LNC2 as seed ortholog is 100%.

Group of orthologs #532. Best score 195 bits
Score difference with first non-orthologous sequence - L.major:61 S.stipitis:66

E9ACA1              	100.00%		A3LXT6              	100.00%
Bootstrap support for E9ACA1 as seed ortholog is 98%.
Bootstrap support for A3LXT6 as seed ortholog is 99%.

Group of orthologs #533. Best score 195 bits
Score difference with first non-orthologous sequence - L.major:143 S.stipitis:15

Q25337              	100.00%		A3LV83              	100.00%
Bootstrap support for Q25337 as seed ortholog is 100%.
Bootstrap support for A3LV83 as seed ortholog is 64%.
Alternative seed ortholog is A3LN35 (15 bits away from this cluster)

Group of orthologs #534. Best score 195 bits
Score difference with first non-orthologous sequence - L.major:195 S.stipitis:116

Q4QCH5              	100.00%		A3LMS4              	100.00%
Bootstrap support for Q4QCH5 as seed ortholog is 100%.
Bootstrap support for A3LMS4 as seed ortholog is 99%.

Group of orthologs #535. Best score 195 bits
Score difference with first non-orthologous sequence - L.major:195 S.stipitis:195

Q4Q669              	100.00%		A3LTU9              	100.00%
Bootstrap support for Q4Q669 as seed ortholog is 100%.
Bootstrap support for A3LTU9 as seed ortholog is 100%.

Group of orthologs #536. Best score 195 bits
Score difference with first non-orthologous sequence - L.major:27 S.stipitis:47

Q4QHC3              	100.00%		A3LXX3              	100.00%
Bootstrap support for Q4QHC3 as seed ortholog is 83%.
Bootstrap support for A3LXX3 as seed ortholog is 96%.

Group of orthologs #537. Best score 194 bits
Score difference with first non-orthologous sequence - L.major:194 S.stipitis:194

E9AF59              	100.00%		A3LWP2              	100.00%
Bootstrap support for E9AF59 as seed ortholog is 100%.
Bootstrap support for A3LWP2 as seed ortholog is 100%.

Group of orthologs #538. Best score 193 bits
Score difference with first non-orthologous sequence - L.major:123 S.stipitis:193

Q4Q0N6              	100.00%		A3LTL8              	100.00%
Bootstrap support for Q4Q0N6 as seed ortholog is 97%.
Bootstrap support for A3LTL8 as seed ortholog is 100%.

Group of orthologs #539. Best score 193 bits
Score difference with first non-orthologous sequence - L.major:62 S.stipitis:47

Q4Q3J7              	100.00%		A3LV51              	100.00%
Bootstrap support for Q4Q3J7 as seed ortholog is 98%.
Bootstrap support for A3LV51 as seed ortholog is 96%.

Group of orthologs #540. Best score 193 bits
Score difference with first non-orthologous sequence - L.major:193 S.stipitis:152

Q4QF82              	100.00%		A3GH30              	100.00%
Bootstrap support for Q4QF82 as seed ortholog is 100%.
Bootstrap support for A3GH30 as seed ortholog is 99%.

Group of orthologs #541. Best score 193 bits
Score difference with first non-orthologous sequence - L.major:193 S.stipitis:99

Q4Q3A3              	100.00%		A3LZ09              	100.00%
Bootstrap support for Q4Q3A3 as seed ortholog is 100%.
Bootstrap support for A3LZ09 as seed ortholog is 98%.

Group of orthologs #542. Best score 193 bits
Score difference with first non-orthologous sequence - L.major:193 S.stipitis:193

Q4QGU1              	100.00%		A3LNY2              	100.00%
Bootstrap support for Q4QGU1 as seed ortholog is 100%.
Bootstrap support for A3LNY2 as seed ortholog is 100%.

Group of orthologs #543. Best score 192 bits
Score difference with first non-orthologous sequence - L.major:192 S.stipitis:192

Q4Q3T5              	100.00%		A3LVQ3              	100.00%
Bootstrap support for Q4Q3T5 as seed ortholog is 100%.
Bootstrap support for A3LVQ3 as seed ortholog is 100%.

Group of orthologs #544. Best score 192 bits
Score difference with first non-orthologous sequence - L.major:192 S.stipitis:192

Q4QAN4              	100.00%		A3LT44              	100.00%
Bootstrap support for Q4QAN4 as seed ortholog is 100%.
Bootstrap support for A3LT44 as seed ortholog is 100%.

Group of orthologs #545. Best score 192 bits
Score difference with first non-orthologous sequence - L.major:192 S.stipitis:192

Q4Q6T3              	100.00%		A3LY49              	100.00%
Bootstrap support for Q4Q6T3 as seed ortholog is 100%.
Bootstrap support for A3LY49 as seed ortholog is 100%.

Group of orthologs #546. Best score 192 bits
Score difference with first non-orthologous sequence - L.major:192 S.stipitis:192

Q4QGW3              	100.00%		A3LQJ0              	100.00%
Bootstrap support for Q4QGW3 as seed ortholog is 100%.
Bootstrap support for A3LQJ0 as seed ortholog is 100%.

Group of orthologs #547. Best score 191 bits
Score difference with first non-orthologous sequence - L.major:40 S.stipitis:75

O97016              	100.00%		A3LVB6              	100.00%
Bootstrap support for O97016 as seed ortholog is 84%.
Bootstrap support for A3LVB6 as seed ortholog is 94%.

Group of orthologs #548. Best score 191 bits
Score difference with first non-orthologous sequence - L.major:191 S.stipitis:191

Q4Q9Q5              	100.00%		A3LQB9              	100.00%
Bootstrap support for Q4Q9Q5 as seed ortholog is 100%.
Bootstrap support for A3LQB9 as seed ortholog is 100%.

Group of orthologs #549. Best score 191 bits
Score difference with first non-orthologous sequence - L.major:191 S.stipitis:191

Q4QIT8              	100.00%		A3GG59              	100.00%
Bootstrap support for Q4QIT8 as seed ortholog is 100%.
Bootstrap support for A3GG59 as seed ortholog is 100%.

Group of orthologs #550. Best score 191 bits
Score difference with first non-orthologous sequence - L.major:191 S.stipitis:137

Q4QD94              	100.00%		A3LVK2              	100.00%
Bootstrap support for Q4QD94 as seed ortholog is 100%.
Bootstrap support for A3LVK2 as seed ortholog is 100%.

Group of orthologs #551. Best score 191 bits
Score difference with first non-orthologous sequence - L.major:191 S.stipitis:191

Q4QHT0              	100.00%		A3LV82              	100.00%
Bootstrap support for Q4QHT0 as seed ortholog is 100%.
Bootstrap support for A3LV82 as seed ortholog is 100%.

Group of orthologs #552. Best score 190 bits
Score difference with first non-orthologous sequence - L.major:190 S.stipitis:190

Q4Q0H0              	100.00%		A3LPE2              	100.00%
Bootstrap support for Q4Q0H0 as seed ortholog is 100%.
Bootstrap support for A3LPE2 as seed ortholog is 100%.

Group of orthologs #553. Best score 190 bits
Score difference with first non-orthologous sequence - L.major:190 S.stipitis:190

Q4Q0Z6              	100.00%		A3LVW8              	100.00%
Bootstrap support for Q4Q0Z6 as seed ortholog is 100%.
Bootstrap support for A3LVW8 as seed ortholog is 100%.

Group of orthologs #554. Best score 190 bits
Score difference with first non-orthologous sequence - L.major:190 S.stipitis:190

Q4Q8Q9              	100.00%		A3LY94              	100.00%
Bootstrap support for Q4Q8Q9 as seed ortholog is 100%.
Bootstrap support for A3LY94 as seed ortholog is 100%.

Group of orthologs #555. Best score 189 bits
Score difference with first non-orthologous sequence - L.major:189 S.stipitis:189

E9AC62              	100.00%		A3LUU1              	100.00%
Bootstrap support for E9AC62 as seed ortholog is 100%.
Bootstrap support for A3LUU1 as seed ortholog is 100%.

Group of orthologs #556. Best score 188 bits
Score difference with first non-orthologous sequence - L.major:188 S.stipitis:188

Q4Q6Z7              	100.00%		A3LSB2              	100.00%
E9AEI1              	14.35%		
Bootstrap support for Q4Q6Z7 as seed ortholog is 100%.
Bootstrap support for A3LSB2 as seed ortholog is 100%.

Group of orthologs #557. Best score 188 bits
Score difference with first non-orthologous sequence - L.major:188 S.stipitis:188

E9AD22              	100.00%		A3LTK4              	100.00%
Bootstrap support for E9AD22 as seed ortholog is 100%.
Bootstrap support for A3LTK4 as seed ortholog is 100%.

Group of orthologs #558. Best score 188 bits
Score difference with first non-orthologous sequence - L.major:188 S.stipitis:188

Q4Q495              	100.00%		A3LPI5              	100.00%
Bootstrap support for Q4Q495 as seed ortholog is 100%.
Bootstrap support for A3LPI5 as seed ortholog is 100%.

Group of orthologs #559. Best score 188 bits
Score difference with first non-orthologous sequence - L.major:188 S.stipitis:188

Q4QBV6              	100.00%		A3LQN6              	100.00%
Bootstrap support for Q4QBV6 as seed ortholog is 100%.
Bootstrap support for A3LQN6 as seed ortholog is 100%.

Group of orthologs #560. Best score 188 bits
Score difference with first non-orthologous sequence - L.major:112 S.stipitis:188

Q4Q7G9              	100.00%		A3LYP7              	100.00%
Bootstrap support for Q4Q7G9 as seed ortholog is 99%.
Bootstrap support for A3LYP7 as seed ortholog is 100%.

Group of orthologs #561. Best score 187 bits
Score difference with first non-orthologous sequence - L.major:95 S.stipitis:187

Q4Q5T1              	100.00%		A3LNW3              	100.00%
Bootstrap support for Q4Q5T1 as seed ortholog is 98%.
Bootstrap support for A3LNW3 as seed ortholog is 100%.

Group of orthologs #562. Best score 187 bits
Score difference with first non-orthologous sequence - L.major:187 S.stipitis:187

Q4Q1U2              	100.00%		A3LZA5              	100.00%
Bootstrap support for Q4Q1U2 as seed ortholog is 100%.
Bootstrap support for A3LZA5 as seed ortholog is 100%.

Group of orthologs #563. Best score 186 bits
Score difference with first non-orthologous sequence - L.major:186 S.stipitis:186

E9AF57              	100.00%		A3GGQ5              	100.00%
Bootstrap support for E9AF57 as seed ortholog is 100%.
Bootstrap support for A3GGQ5 as seed ortholog is 100%.

Group of orthologs #564. Best score 186 bits
Score difference with first non-orthologous sequence - L.major:186 S.stipitis:186

Q4Q791              	100.00%		A3GGM5              	100.00%
Bootstrap support for Q4Q791 as seed ortholog is 100%.
Bootstrap support for A3GGM5 as seed ortholog is 100%.

Group of orthologs #565. Best score 186 bits
Score difference with first non-orthologous sequence - L.major:186 S.stipitis:186

Q4QB22              	100.00%		A3GG29              	100.00%
Bootstrap support for Q4QB22 as seed ortholog is 100%.
Bootstrap support for A3GG29 as seed ortholog is 100%.

Group of orthologs #566. Best score 186 bits
Score difference with first non-orthologous sequence - L.major:59 S.stipitis:42

Q4Q0D3              	100.00%		A3LXZ2              	100.00%
Bootstrap support for Q4Q0D3 as seed ortholog is 93%.
Bootstrap support for A3LXZ2 as seed ortholog is 54%.
Alternative seed ortholog is A3LZF6 (42 bits away from this cluster)

Group of orthologs #567. Best score 186 bits
Score difference with first non-orthologous sequence - L.major:186 S.stipitis:186

Q4QHS0              	100.00%		A3LX86              	100.00%
Bootstrap support for Q4QHS0 as seed ortholog is 100%.
Bootstrap support for A3LX86 as seed ortholog is 100%.

Group of orthologs #568. Best score 185 bits
Score difference with first non-orthologous sequence - L.major:123 S.stipitis:46

Q4Q698              	100.00%		A3LUB4              	100.00%
Q4Q699              	75.91%		A3LPT7              	50.75%
Bootstrap support for Q4Q698 as seed ortholog is 99%.
Bootstrap support for A3LUB4 as seed ortholog is 83%.

Group of orthologs #569. Best score 185 bits
Score difference with first non-orthologous sequence - L.major:185 S.stipitis:185

Q4Q0M6              	100.00%		A3LUJ2              	100.00%
Bootstrap support for Q4Q0M6 as seed ortholog is 100%.
Bootstrap support for A3LUJ2 as seed ortholog is 100%.

Group of orthologs #570. Best score 185 bits
Score difference with first non-orthologous sequence - L.major:185 S.stipitis:185

Q4Q9H1              	100.00%		A3LQV5              	100.00%
Bootstrap support for Q4Q9H1 as seed ortholog is 100%.
Bootstrap support for A3LQV5 as seed ortholog is 100%.

Group of orthologs #571. Best score 184 bits
Score difference with first non-orthologous sequence - L.major:184 S.stipitis:184

Q4QF35              	100.00%		A3GG94              	100.00%
Bootstrap support for Q4QF35 as seed ortholog is 100%.
Bootstrap support for A3GG94 as seed ortholog is 100%.

Group of orthologs #572. Best score 183 bits
Score difference with first non-orthologous sequence - L.major:1 S.stipitis:50

E9AEB9              	100.00%		A3LZN6              	100.00%
Q4Q5T9              	5.51%		
Bootstrap support for E9AEB9 as seed ortholog is 60%.
Alternative seed ortholog is Q4QC33 (1 bits away from this cluster)
Bootstrap support for A3LZN6 as seed ortholog is 88%.

Group of orthologs #573. Best score 183 bits
Score difference with first non-orthologous sequence - L.major:183 S.stipitis:183

Q4Q0P6              	100.00%		A3LW59              	100.00%
Bootstrap support for Q4Q0P6 as seed ortholog is 100%.
Bootstrap support for A3LW59 as seed ortholog is 100%.

Group of orthologs #574. Best score 183 bits
Score difference with first non-orthologous sequence - L.major:183 S.stipitis:183

Q4Q7E9              	100.00%		A3LX03              	100.00%
Bootstrap support for Q4Q7E9 as seed ortholog is 100%.
Bootstrap support for A3LX03 as seed ortholog is 100%.

Group of orthologs #575. Best score 183 bits
Score difference with first non-orthologous sequence - L.major:183 S.stipitis:183

Q4QH59              	100.00%		A3LQ79              	100.00%
Bootstrap support for Q4QH59 as seed ortholog is 100%.
Bootstrap support for A3LQ79 as seed ortholog is 100%.

Group of orthologs #576. Best score 183 bits
Score difference with first non-orthologous sequence - L.major:66 S.stipitis:118

Q4QDK5              	100.00%		A3LWC5              	100.00%
Bootstrap support for Q4QDK5 as seed ortholog is 95%.
Bootstrap support for A3LWC5 as seed ortholog is 99%.

Group of orthologs #577. Best score 183 bits
Score difference with first non-orthologous sequence - L.major:183 S.stipitis:140

Q4QGX0              	100.00%		A3LZ81              	100.00%
Bootstrap support for Q4QGX0 as seed ortholog is 100%.
Bootstrap support for A3LZ81 as seed ortholog is 99%.

Group of orthologs #578. Best score 182 bits
Score difference with first non-orthologous sequence - L.major:182 S.stipitis:182

E9ADC7              	100.00%		A3LRF1              	100.00%
Bootstrap support for E9ADC7 as seed ortholog is 100%.
Bootstrap support for A3LRF1 as seed ortholog is 100%.

Group of orthologs #579. Best score 181 bits
Score difference with first non-orthologous sequence - L.major:181 S.stipitis:181

E9AEW5              	100.00%		A3LSS6              	100.00%
Bootstrap support for E9AEW5 as seed ortholog is 100%.
Bootstrap support for A3LSS6 as seed ortholog is 100%.

Group of orthologs #580. Best score 181 bits
Score difference with first non-orthologous sequence - L.major:76 S.stipitis:39

Q4Q9V4              	100.00%		A3GEZ2              	100.00%
Bootstrap support for Q4Q9V4 as seed ortholog is 98%.
Bootstrap support for A3GEZ2 as seed ortholog is 88%.

Group of orthologs #581. Best score 179 bits
Score difference with first non-orthologous sequence - L.major:179 S.stipitis:179

Q4Q453              	100.00%		A3LT92              	100.00%
Bootstrap support for Q4Q453 as seed ortholog is 100%.
Bootstrap support for A3LT92 as seed ortholog is 100%.

Group of orthologs #582. Best score 179 bits
Score difference with first non-orthologous sequence - L.major:179 S.stipitis:179

Q4QE31              	100.00%		A3LV87              	100.00%
Bootstrap support for Q4QE31 as seed ortholog is 100%.
Bootstrap support for A3LV87 as seed ortholog is 100%.

Group of orthologs #583. Best score 178 bits
Score difference with first non-orthologous sequence - L.major:178 S.stipitis:178

E9AFI3              	100.00%		A3LTL9              	100.00%
Bootstrap support for E9AFI3 as seed ortholog is 100%.
Bootstrap support for A3LTL9 as seed ortholog is 100%.

Group of orthologs #584. Best score 178 bits
Score difference with first non-orthologous sequence - L.major:178 S.stipitis:178

Q4Q6S2              	100.00%		A3GHV8              	100.00%
Bootstrap support for Q4Q6S2 as seed ortholog is 100%.
Bootstrap support for A3GHV8 as seed ortholog is 100%.

Group of orthologs #585. Best score 178 bits
Score difference with first non-orthologous sequence - L.major:178 S.stipitis:10

Q4Q0Q3              	100.00%		A3LVM4              	100.00%
Bootstrap support for Q4Q0Q3 as seed ortholog is 100%.
Bootstrap support for A3LVM4 as seed ortholog is 62%.
Alternative seed ortholog is A3LMY0 (10 bits away from this cluster)

Group of orthologs #586. Best score 178 bits
Score difference with first non-orthologous sequence - L.major:53 S.stipitis:24

Q4QJ96              	100.00%		A3GF11              	100.00%
Bootstrap support for Q4QJ96 as seed ortholog is 86%.
Bootstrap support for A3GF11 as seed ortholog is 69%.
Alternative seed ortholog is A3LPR2 (24 bits away from this cluster)

Group of orthologs #587. Best score 178 bits
Score difference with first non-orthologous sequence - L.major:178 S.stipitis:178

Q4QJB9              	100.00%		A3LNX3              	100.00%
Bootstrap support for Q4QJB9 as seed ortholog is 100%.
Bootstrap support for A3LNX3 as seed ortholog is 100%.

Group of orthologs #588. Best score 177 bits
Score difference with first non-orthologous sequence - L.major:177 S.stipitis:177

E9AFI2              	100.00%		A3GID3              	100.00%
E9AFI7              	15.83%		A3LX79              	27.58%
                    	       		A3LMV7              	26.03%
                    	       		A3LSB0              	22.42%
Bootstrap support for E9AFI2 as seed ortholog is 100%.
Bootstrap support for A3GID3 as seed ortholog is 100%.

Group of orthologs #589. Best score 177 bits
Score difference with first non-orthologous sequence - L.major:177 S.stipitis:177

Q4Q3V7              	100.00%		A3LR63              	100.00%
Bootstrap support for Q4Q3V7 as seed ortholog is 100%.
Bootstrap support for A3LR63 as seed ortholog is 100%.

Group of orthologs #590. Best score 177 bits
Score difference with first non-orthologous sequence - L.major:129 S.stipitis:177

Q4QJ81              	100.00%		A3LUI8              	100.00%
Bootstrap support for Q4QJ81 as seed ortholog is 99%.
Bootstrap support for A3LUI8 as seed ortholog is 100%.

Group of orthologs #591. Best score 177 bits
Score difference with first non-orthologous sequence - L.major:177 S.stipitis:177

Q4QIH4              	100.00%		A3LW27              	100.00%
Bootstrap support for Q4QIH4 as seed ortholog is 100%.
Bootstrap support for A3LW27 as seed ortholog is 100%.

Group of orthologs #592. Best score 176 bits
Score difference with first non-orthologous sequence - L.major:176 S.stipitis:176

E9ADC6              	100.00%		A3GHJ3              	100.00%
Bootstrap support for E9ADC6 as seed ortholog is 100%.
Bootstrap support for A3GHJ3 as seed ortholog is 100%.

Group of orthologs #593. Best score 176 bits
Score difference with first non-orthologous sequence - L.major:176 S.stipitis:176

Q4Q1W0              	100.00%		A3LWQ7              	100.00%
Bootstrap support for Q4Q1W0 as seed ortholog is 100%.
Bootstrap support for A3LWQ7 as seed ortholog is 100%.

Group of orthologs #594. Best score 175 bits
Score difference with first non-orthologous sequence - L.major:175 S.stipitis:175

Q4Q779              	100.00%		A3LRM1              	100.00%
                    	       		A3LNH5              	5.04%
Bootstrap support for Q4Q779 as seed ortholog is 100%.
Bootstrap support for A3LRM1 as seed ortholog is 100%.

Group of orthologs #595. Best score 175 bits
Score difference with first non-orthologous sequence - L.major:8 S.stipitis:90

Q4QHY3              	100.00%		A3GI29              	100.00%
Q4QHY4              	88.46%		
Bootstrap support for Q4QHY3 as seed ortholog is 61%.
Alternative seed ortholog is Q4QFG6 (8 bits away from this cluster)
Bootstrap support for A3GI29 as seed ortholog is 97%.

Group of orthologs #596. Best score 175 bits
Score difference with first non-orthologous sequence - L.major:82 S.stipitis:175

E9AD15              	100.00%		A3LQ28              	100.00%
Bootstrap support for E9AD15 as seed ortholog is 13%.
Alternative seed ortholog is Q4Q7W0 (82 bits away from this cluster)
Bootstrap support for A3LQ28 as seed ortholog is 100%.

Group of orthologs #597. Best score 175 bits
Score difference with first non-orthologous sequence - L.major:73 S.stipitis:37

E9ADA6              	100.00%		A3LQK0              	100.00%
Bootstrap support for E9ADA6 as seed ortholog is 96%.
Bootstrap support for A3LQK0 as seed ortholog is 76%.

Group of orthologs #598. Best score 175 bits
Score difference with first non-orthologous sequence - L.major:175 S.stipitis:175

Q4Q2B2              	100.00%		A3GHP2              	100.00%
Bootstrap support for Q4Q2B2 as seed ortholog is 100%.
Bootstrap support for A3GHP2 as seed ortholog is 100%.

Group of orthologs #599. Best score 174 bits
Score difference with first non-orthologous sequence - L.major:174 S.stipitis:174

E9AEP5              	100.00%		A3GF08              	100.00%
Bootstrap support for E9AEP5 as seed ortholog is 100%.
Bootstrap support for A3GF08 as seed ortholog is 100%.

Group of orthologs #600. Best score 174 bits
Score difference with first non-orthologous sequence - L.major:174 S.stipitis:174

Q4QCN5              	100.00%		A3GHZ3              	100.00%
Bootstrap support for Q4QCN5 as seed ortholog is 100%.
Bootstrap support for A3GHZ3 as seed ortholog is 100%.

Group of orthologs #601. Best score 174 bits
Score difference with first non-orthologous sequence - L.major:5 S.stipitis:174

Q9NF78              	100.00%		A3LRC1              	100.00%
Bootstrap support for Q9NF78 as seed ortholog is 54%.
Alternative seed ortholog is E9AEA1 (5 bits away from this cluster)
Bootstrap support for A3LRC1 as seed ortholog is 100%.

Group of orthologs #602. Best score 173 bits
Score difference with first non-orthologous sequence - L.major:173 S.stipitis:173

Q4Q1L8              	100.00%		A3LTB7              	100.00%
Bootstrap support for Q4Q1L8 as seed ortholog is 100%.
Bootstrap support for A3LTB7 as seed ortholog is 100%.

Group of orthologs #603. Best score 173 bits
Score difference with first non-orthologous sequence - L.major:173 S.stipitis:45

Q4Q1G0              	100.00%		A3LUA8              	100.00%
Bootstrap support for Q4Q1G0 as seed ortholog is 100%.
Bootstrap support for A3LUA8 as seed ortholog is 89%.

Group of orthologs #604. Best score 173 bits
Score difference with first non-orthologous sequence - L.major:173 S.stipitis:173

Q4QF22              	100.00%		A3LYF4              	100.00%
Bootstrap support for Q4QF22 as seed ortholog is 100%.
Bootstrap support for A3LYF4 as seed ortholog is 100%.

Group of orthologs #605. Best score 172 bits
Score difference with first non-orthologous sequence - L.major:172 S.stipitis:172

E9AEY0              	100.00%		A3LSY7              	100.00%
                    	       		A3LZT0              	33.58%
Bootstrap support for E9AEY0 as seed ortholog is 100%.
Bootstrap support for A3LSY7 as seed ortholog is 100%.

Group of orthologs #606. Best score 172 bits
Score difference with first non-orthologous sequence - L.major:172 S.stipitis:172

E9AFI6              	100.00%		A3LPI0              	100.00%
Bootstrap support for E9AFI6 as seed ortholog is 100%.
Bootstrap support for A3LPI0 as seed ortholog is 100%.

Group of orthologs #607. Best score 172 bits
Score difference with first non-orthologous sequence - L.major:172 S.stipitis:172

Q4Q1C0              	100.00%		A3LP86              	100.00%
Bootstrap support for Q4Q1C0 as seed ortholog is 100%.
Bootstrap support for A3LP86 as seed ortholog is 100%.

Group of orthologs #608. Best score 172 bits
Score difference with first non-orthologous sequence - L.major:172 S.stipitis:172

Q4Q601              	100.00%		A3LYN5              	100.00%
Bootstrap support for Q4Q601 as seed ortholog is 100%.
Bootstrap support for A3LYN5 as seed ortholog is 100%.

Group of orthologs #609. Best score 172 bits
Score difference with first non-orthologous sequence - L.major:172 S.stipitis:66

Q4QFI1              	100.00%		A3LQ03              	100.00%
Bootstrap support for Q4QFI1 as seed ortholog is 100%.
Bootstrap support for A3LQ03 as seed ortholog is 92%.

Group of orthologs #610. Best score 172 bits
Score difference with first non-orthologous sequence - L.major:172 S.stipitis:172

Q4QAZ0              	100.00%		A3LWT3              	100.00%
Bootstrap support for Q4QAZ0 as seed ortholog is 100%.
Bootstrap support for A3LWT3 as seed ortholog is 100%.

Group of orthologs #611. Best score 171 bits
Score difference with first non-orthologous sequence - L.major:171 S.stipitis:171

Q4Q0H2              	100.00%		A3LQU3              	100.00%
Bootstrap support for Q4Q0H2 as seed ortholog is 100%.
Bootstrap support for A3LQU3 as seed ortholog is 100%.

Group of orthologs #612. Best score 171 bits
Score difference with first non-orthologous sequence - L.major:30 S.stipitis:52

Q4Q1Z0              	100.00%		A3LPZ8              	100.00%
Bootstrap support for Q4Q1Z0 as seed ortholog is 80%.
Bootstrap support for A3LPZ8 as seed ortholog is 90%.

Group of orthologs #613. Best score 171 bits
Score difference with first non-orthologous sequence - L.major:171 S.stipitis:171

Q4Q8K7              	100.00%		A3GGN4              	100.00%
Bootstrap support for Q4Q8K7 as seed ortholog is 100%.
Bootstrap support for A3GGN4 as seed ortholog is 100%.

Group of orthologs #614. Best score 171 bits
Score difference with first non-orthologous sequence - L.major:171 S.stipitis:171

Q4Q9J0              	100.00%		A3GG37              	100.00%
Bootstrap support for Q4Q9J0 as seed ortholog is 100%.
Bootstrap support for A3GG37 as seed ortholog is 100%.

Group of orthologs #615. Best score 171 bits
Score difference with first non-orthologous sequence - L.major:171 S.stipitis:171

E9AFR7              	100.00%		A3LVN0              	100.00%
Bootstrap support for E9AFR7 as seed ortholog is 100%.
Bootstrap support for A3LVN0 as seed ortholog is 100%.

Group of orthologs #616. Best score 171 bits
Score difference with first non-orthologous sequence - L.major:171 S.stipitis:171

Q4Q8W9              	100.00%		A3LR65              	100.00%
Bootstrap support for Q4Q8W9 as seed ortholog is 100%.
Bootstrap support for A3LR65 as seed ortholog is 100%.

Group of orthologs #617. Best score 171 bits
Score difference with first non-orthologous sequence - L.major:171 S.stipitis:124

Q4Q5P6              	100.00%		A3LVD0              	100.00%
Bootstrap support for Q4Q5P6 as seed ortholog is 100%.
Bootstrap support for A3LVD0 as seed ortholog is 99%.

Group of orthologs #618. Best score 171 bits
Score difference with first non-orthologous sequence - L.major:171 S.stipitis:171

Q4QDM8              	100.00%		A3LP78              	100.00%
Bootstrap support for Q4QDM8 as seed ortholog is 100%.
Bootstrap support for A3LP78 as seed ortholog is 100%.

Group of orthologs #619. Best score 171 bits
Score difference with first non-orthologous sequence - L.major:171 S.stipitis:171

Q4QJ65              	100.00%		A3GGN3              	100.00%
Bootstrap support for Q4QJ65 as seed ortholog is 100%.
Bootstrap support for A3GGN3 as seed ortholog is 100%.

Group of orthologs #620. Best score 171 bits
Score difference with first non-orthologous sequence - L.major:171 S.stipitis:171

Q4QDJ0              	100.00%		A3LU96              	100.00%
Bootstrap support for Q4QDJ0 as seed ortholog is 100%.
Bootstrap support for A3LU96 as seed ortholog is 100%.

Group of orthologs #621. Best score 170 bits
Score difference with first non-orthologous sequence - L.major:170 S.stipitis:170

E9AFK0              	100.00%		A3LQV9              	100.00%
Bootstrap support for E9AFK0 as seed ortholog is 100%.
Bootstrap support for A3LQV9 as seed ortholog is 100%.

Group of orthologs #622. Best score 170 bits
Score difference with first non-orthologous sequence - L.major:170 S.stipitis:92

Q4Q6Q0              	100.00%		A3GFE2              	100.00%
Bootstrap support for Q4Q6Q0 as seed ortholog is 100%.
Bootstrap support for A3GFE2 as seed ortholog is 99%.

Group of orthologs #623. Best score 170 bits
Score difference with first non-orthologous sequence - L.major:170 S.stipitis:170

Q4Q8D4              	100.00%		A3GIC9              	100.00%
Bootstrap support for Q4Q8D4 as seed ortholog is 100%.
Bootstrap support for A3GIC9 as seed ortholog is 100%.

Group of orthologs #624. Best score 170 bits
Score difference with first non-orthologous sequence - L.major:170 S.stipitis:170

Q4QIL9              	100.00%		A3GFV4              	100.00%
Bootstrap support for Q4QIL9 as seed ortholog is 100%.
Bootstrap support for A3GFV4 as seed ortholog is 100%.

Group of orthologs #625. Best score 169 bits
Score difference with first non-orthologous sequence - L.major:169 S.stipitis:169

Q4Q1Y2              	100.00%		A3LWF6              	100.00%
Q4Q1Y3              	100.00%		
Bootstrap support for Q4Q1Y2 as seed ortholog is 100%.
Bootstrap support for Q4Q1Y3 as seed ortholog is 100%.
Bootstrap support for A3LWF6 as seed ortholog is 100%.

Group of orthologs #626. Best score 169 bits
Score difference with first non-orthologous sequence - L.major:169 S.stipitis:169

Q4QAI2              	100.00%		A3GGB8              	100.00%
Bootstrap support for Q4QAI2 as seed ortholog is 100%.
Bootstrap support for A3GGB8 as seed ortholog is 100%.

Group of orthologs #627. Best score 169 bits
Score difference with first non-orthologous sequence - L.major:169 S.stipitis:169

Q4Q7P3              	100.00%		A3LQP9              	100.00%
Bootstrap support for Q4Q7P3 as seed ortholog is 100%.
Bootstrap support for A3LQP9 as seed ortholog is 100%.

Group of orthologs #628. Best score 168 bits
Score difference with first non-orthologous sequence - L.major:74 S.stipitis:94

Q4Q7R7              	100.00%		A3GFN3              	100.00%
Bootstrap support for Q4Q7R7 as seed ortholog is 97%.
Bootstrap support for A3GFN3 as seed ortholog is 99%.

Group of orthologs #629. Best score 168 bits
Score difference with first non-orthologous sequence - L.major:168 S.stipitis:168

Q4QFZ8              	100.00%		A3LTQ4              	100.00%
Bootstrap support for Q4QFZ8 as seed ortholog is 100%.
Bootstrap support for A3LTQ4 as seed ortholog is 100%.

Group of orthologs #630. Best score 168 bits
Score difference with first non-orthologous sequence - L.major:44 S.stipitis:51

Q9N2P5              	100.00%		A3LTR3              	100.00%
Bootstrap support for Q9N2P5 as seed ortholog is 91%.
Bootstrap support for A3LTR3 as seed ortholog is 94%.

Group of orthologs #631. Best score 168 bits
Score difference with first non-orthologous sequence - L.major:168 S.stipitis:168

Q4QIL3              	100.00%		A3LYR6              	100.00%
Bootstrap support for Q4QIL3 as seed ortholog is 100%.
Bootstrap support for A3LYR6 as seed ortholog is 100%.

Group of orthologs #632. Best score 167 bits
Score difference with first non-orthologous sequence - L.major:64 S.stipitis:79

E9ACK2              	100.00%		A3LYC3              	100.00%
Bootstrap support for E9ACK2 as seed ortholog is 96%.
Bootstrap support for A3LYC3 as seed ortholog is 98%.

Group of orthologs #633. Best score 166 bits
Score difference with first non-orthologous sequence - L.major:166 S.stipitis:166

Q4QC03              	100.00%		A3GHK3              	100.00%
Q4Q8F0              	37.95%		A3LPC4              	6.80%
Q4QBG2              	12.82%		
Bootstrap support for Q4QC03 as seed ortholog is 100%.
Bootstrap support for A3GHK3 as seed ortholog is 100%.

Group of orthologs #634. Best score 166 bits
Score difference with first non-orthologous sequence - L.major:105 S.stipitis:79

Q4Q5S5              	100.00%		A3M0K7              	100.00%
Bootstrap support for Q4Q5S5 as seed ortholog is 99%.
Bootstrap support for A3M0K7 as seed ortholog is 97%.

Group of orthologs #635. Best score 166 bits
Score difference with first non-orthologous sequence - L.major:166 S.stipitis:22

Q4QIY1              	100.00%		A3LTH0              	100.00%
Bootstrap support for Q4QIY1 as seed ortholog is 100%.
Bootstrap support for A3LTH0 as seed ortholog is 77%.

Group of orthologs #636. Best score 165 bits
Score difference with first non-orthologous sequence - L.major:165 S.stipitis:165

Q4Q1K0              	100.00%		A3GFC2              	100.00%
Q4QFU7              	11.87%		
Bootstrap support for Q4Q1K0 as seed ortholog is 100%.
Bootstrap support for A3GFC2 as seed ortholog is 100%.

Group of orthologs #637. Best score 165 bits
Score difference with first non-orthologous sequence - L.major:165 S.stipitis:165

E9AFZ6              	100.00%		A3LS77              	100.00%
Bootstrap support for E9AFZ6 as seed ortholog is 100%.
Bootstrap support for A3LS77 as seed ortholog is 100%.

Group of orthologs #638. Best score 165 bits
Score difference with first non-orthologous sequence - L.major:165 S.stipitis:165

E9AE76              	100.00%		A3LX84              	100.00%
Bootstrap support for E9AE76 as seed ortholog is 100%.
Bootstrap support for A3LX84 as seed ortholog is 100%.

Group of orthologs #639. Best score 165 bits
Score difference with first non-orthologous sequence - L.major:165 S.stipitis:165

Q4Q176              	100.00%		A3LZZ8              	100.00%
Bootstrap support for Q4Q176 as seed ortholog is 100%.
Bootstrap support for A3LZZ8 as seed ortholog is 100%.

Group of orthologs #640. Best score 165 bits
Score difference with first non-orthologous sequence - L.major:165 S.stipitis:165

Q4QCN7              	100.00%		A3LR50              	100.00%
Bootstrap support for Q4QCN7 as seed ortholog is 100%.
Bootstrap support for A3LR50 as seed ortholog is 100%.

Group of orthologs #641. Best score 165 bits
Score difference with first non-orthologous sequence - L.major:165 S.stipitis:107

Q4VQ66              	100.00%		A3GHF5              	100.00%
Bootstrap support for Q4VQ66 as seed ortholog is 100%.
Bootstrap support for A3GHF5 as seed ortholog is 99%.

Group of orthologs #642. Best score 165 bits
Score difference with first non-orthologous sequence - L.major:165 S.stipitis:165

Q4QFP4              	100.00%		A3LSH4              	100.00%
Bootstrap support for Q4QFP4 as seed ortholog is 100%.
Bootstrap support for A3LSH4 as seed ortholog is 100%.

Group of orthologs #643. Best score 164 bits
Score difference with first non-orthologous sequence - L.major:164 S.stipitis:164

Q4Q391              	100.00%		A3LZG1              	100.00%
Bootstrap support for Q4Q391 as seed ortholog is 100%.
Bootstrap support for A3LZG1 as seed ortholog is 100%.

Group of orthologs #644. Best score 163 bits
Score difference with first non-orthologous sequence - L.major:163 S.stipitis:163

E9ACN6              	100.00%		A3LTU4              	100.00%
Bootstrap support for E9ACN6 as seed ortholog is 100%.
Bootstrap support for A3LTU4 as seed ortholog is 100%.

Group of orthologs #645. Best score 163 bits
Score difference with first non-orthologous sequence - L.major:39 S.stipitis:163

E9AEM6              	100.00%		A3LUT3              	100.00%
Bootstrap support for E9AEM6 as seed ortholog is 80%.
Bootstrap support for A3LUT3 as seed ortholog is 100%.

Group of orthologs #646. Best score 163 bits
Score difference with first non-orthologous sequence - L.major:163 S.stipitis:163

Q4Q0I6              	100.00%		A3LW69              	100.00%
Bootstrap support for Q4Q0I6 as seed ortholog is 100%.
Bootstrap support for A3LW69 as seed ortholog is 100%.

Group of orthologs #647. Best score 163 bits
Score difference with first non-orthologous sequence - L.major:163 S.stipitis:163

Q4QEG7              	100.00%		A3LMX0              	100.00%
Bootstrap support for Q4QEG7 as seed ortholog is 100%.
Bootstrap support for A3LMX0 as seed ortholog is 100%.

Group of orthologs #648. Best score 163 bits
Score difference with first non-orthologous sequence - L.major:163 S.stipitis:163

Q4QCP6              	100.00%		A3LPR3              	100.00%
Bootstrap support for Q4QCP6 as seed ortholog is 100%.
Bootstrap support for A3LPR3 as seed ortholog is 100%.

Group of orthologs #649. Best score 163 bits
Score difference with first non-orthologous sequence - L.major:163 S.stipitis:163

Q4QEY9              	100.00%		A3LTN2              	100.00%
Bootstrap support for Q4QEY9 as seed ortholog is 100%.
Bootstrap support for A3LTN2 as seed ortholog is 100%.

Group of orthologs #650. Best score 162 bits
Score difference with first non-orthologous sequence - L.major:162 S.stipitis:162

Q4Q6V5              	100.00%		A3LZW4              	100.00%
Q4QC91              	100.00%		
Bootstrap support for Q4Q6V5 as seed ortholog is 100%.
Bootstrap support for Q4QC91 as seed ortholog is 100%.
Bootstrap support for A3LZW4 as seed ortholog is 100%.

Group of orthologs #651. Best score 162 bits
Score difference with first non-orthologous sequence - L.major:78 S.stipitis:162

Q4Q5L3              	100.00%		A3LRC8              	100.00%
Bootstrap support for Q4Q5L3 as seed ortholog is 99%.
Bootstrap support for A3LRC8 as seed ortholog is 100%.

Group of orthologs #652. Best score 161 bits
Score difference with first non-orthologous sequence - L.major:161 S.stipitis:161

Q4Q5P2              	100.00%		A3LU90              	100.00%
Q4QAX6              	98.90%		
Bootstrap support for Q4Q5P2 as seed ortholog is 100%.
Bootstrap support for A3LU90 as seed ortholog is 100%.

Group of orthologs #653. Best score 161 bits
Score difference with first non-orthologous sequence - L.major:161 S.stipitis:161

E9ACU7              	100.00%		A3LN55              	100.00%
Bootstrap support for E9ACU7 as seed ortholog is 100%.
Bootstrap support for A3LN55 as seed ortholog is 100%.

Group of orthologs #654. Best score 161 bits
Score difference with first non-orthologous sequence - L.major:8 S.stipitis:22

E9ACW7              	100.00%		A3LU79              	100.00%
Bootstrap support for E9ACW7 as seed ortholog is 60%.
Alternative seed ortholog is Q4QIJ7 (8 bits away from this cluster)
Bootstrap support for A3LU79 as seed ortholog is 72%.
Alternative seed ortholog is A3LNN2 (22 bits away from this cluster)

Group of orthologs #655. Best score 161 bits
Score difference with first non-orthologous sequence - L.major:18 S.stipitis:161

O97196              	100.00%		A3LS34              	100.00%
Bootstrap support for O97196 as seed ortholog is 71%.
Alternative seed ortholog is Q4Q8Z5 (18 bits away from this cluster)
Bootstrap support for A3LS34 as seed ortholog is 100%.

Group of orthologs #656. Best score 161 bits
Score difference with first non-orthologous sequence - L.major:161 S.stipitis:161

E9AFZ8              	100.00%		A3LTA7              	100.00%
Bootstrap support for E9AFZ8 as seed ortholog is 100%.
Bootstrap support for A3LTA7 as seed ortholog is 100%.

Group of orthologs #657. Best score 161 bits
Score difference with first non-orthologous sequence - L.major:161 S.stipitis:161

Q4QBI4              	100.00%		A3LRK0              	100.00%
Bootstrap support for Q4QBI4 as seed ortholog is 100%.
Bootstrap support for A3LRK0 as seed ortholog is 100%.

Group of orthologs #658. Best score 161 bits
Score difference with first non-orthologous sequence - L.major:161 S.stipitis:161

Q4QDE8              	100.00%		A3LUF8              	100.00%
Bootstrap support for Q4QDE8 as seed ortholog is 100%.
Bootstrap support for A3LUF8 as seed ortholog is 100%.

Group of orthologs #659. Best score 161 bits
Score difference with first non-orthologous sequence - L.major:26 S.stipitis:23

Q4QDS9              	100.00%		A3LZ12              	100.00%
Bootstrap support for Q4QDS9 as seed ortholog is 81%.
Bootstrap support for A3LZ12 as seed ortholog is 76%.

Group of orthologs #660. Best score 161 bits
Score difference with first non-orthologous sequence - L.major:56 S.stipitis:161

Q4QGV4              	100.00%		A3M0I4              	100.00%
Bootstrap support for Q4QGV4 as seed ortholog is 92%.
Bootstrap support for A3M0I4 as seed ortholog is 100%.

Group of orthologs #661. Best score 160 bits
Score difference with first non-orthologous sequence - L.major:93 S.stipitis:160

Q4Q127              	100.00%		A3LX18              	100.00%
Bootstrap support for Q4Q127 as seed ortholog is 99%.
Bootstrap support for A3LX18 as seed ortholog is 100%.

Group of orthologs #662. Best score 160 bits
Score difference with first non-orthologous sequence - L.major:30 S.stipitis:96

Q4Q2W1              	100.00%		A3M0A3              	100.00%
Bootstrap support for Q4Q2W1 as seed ortholog is 90%.
Bootstrap support for A3M0A3 as seed ortholog is 100%.

Group of orthologs #663. Best score 159 bits
Score difference with first non-orthologous sequence - L.major:106 S.stipitis:75

Q4Q7J8              	100.00%		A3LQ14              	100.00%
Bootstrap support for Q4Q7J8 as seed ortholog is 99%.
Bootstrap support for A3LQ14 as seed ortholog is 97%.

Group of orthologs #664. Best score 159 bits
Score difference with first non-orthologous sequence - L.major:59 S.stipitis:159

Q4Q5Y6              	100.00%		A3LZB8              	100.00%
Bootstrap support for Q4Q5Y6 as seed ortholog is 94%.
Bootstrap support for A3LZB8 as seed ortholog is 100%.

Group of orthologs #665. Best score 158 bits
Score difference with first non-orthologous sequence - L.major:158 S.stipitis:158

Q4Q3B9              	100.00%		A3GFB5              	100.00%
Q4QFG2              	100.00%		
Bootstrap support for Q4Q3B9 as seed ortholog is 100%.
Bootstrap support for Q4QFG2 as seed ortholog is 100%.
Bootstrap support for A3GFB5 as seed ortholog is 100%.

Group of orthologs #666. Best score 158 bits
Score difference with first non-orthologous sequence - L.major:13 S.stipitis:158

Q4QD55              	100.00%		A3LX56              	100.00%
                    	       		A3LNW5              	13.49%
Bootstrap support for Q4QD55 as seed ortholog is 57%.
Alternative seed ortholog is E9ADY9 (13 bits away from this cluster)
Bootstrap support for A3LX56 as seed ortholog is 100%.

Group of orthologs #667. Best score 158 bits
Score difference with first non-orthologous sequence - L.major:158 S.stipitis:158

E9AEN3              	100.00%		A3LV46              	100.00%
Bootstrap support for E9AEN3 as seed ortholog is 100%.
Bootstrap support for A3LV46 as seed ortholog is 100%.

Group of orthologs #668. Best score 158 bits
Score difference with first non-orthologous sequence - L.major:158 S.stipitis:158

E9ADC5              	100.00%		A3LZE7              	100.00%
Bootstrap support for E9ADC5 as seed ortholog is 100%.
Bootstrap support for A3LZE7 as seed ortholog is 100%.

Group of orthologs #669. Best score 158 bits
Score difference with first non-orthologous sequence - L.major:158 S.stipitis:158

Q4QF34              	100.00%		A3GGL6              	100.00%
Bootstrap support for Q4QF34 as seed ortholog is 100%.
Bootstrap support for A3GGL6 as seed ortholog is 100%.

Group of orthologs #670. Best score 157 bits
Score difference with first non-orthologous sequence - L.major:157 S.stipitis:157

Q4QDY6              	100.00%		A3LTT7              	100.00%
Bootstrap support for Q4QDY6 as seed ortholog is 100%.
Bootstrap support for A3LTT7 as seed ortholog is 100%.

Group of orthologs #671. Best score 156 bits
Score difference with first non-orthologous sequence - L.major:156 S.stipitis:93

Q4Q3T2              	100.00%		A3LNB3              	100.00%
                    	       		A3LYS8              	24.25%
Bootstrap support for Q4Q3T2 as seed ortholog is 100%.
Bootstrap support for A3LNB3 as seed ortholog is 96%.

Group of orthologs #672. Best score 156 bits
Score difference with first non-orthologous sequence - L.major:63 S.stipitis:94

Q4QD15              	100.00%		A3LY99              	100.00%
Bootstrap support for Q4QD15 as seed ortholog is 94%.
Bootstrap support for A3LY99 as seed ortholog is 99%.

Group of orthologs #673. Best score 156 bits
Score difference with first non-orthologous sequence - L.major:156 S.stipitis:19

Q4QHW5              	100.00%		A3LZR3              	100.00%
Bootstrap support for Q4QHW5 as seed ortholog is 100%.
Bootstrap support for A3LZR3 as seed ortholog is 87%.

Group of orthologs #674. Best score 155 bits
Score difference with first non-orthologous sequence - L.major:28 S.stipitis:35

Q4QGD2              	100.00%		A3GGS8              	100.00%
Bootstrap support for Q4QGD2 as seed ortholog is 85%.
Bootstrap support for A3GGS8 as seed ortholog is 89%.

Group of orthologs #675. Best score 155 bits
Score difference with first non-orthologous sequence - L.major:86 S.stipitis:98

Q4QC21              	100.00%		A3LQL8              	100.00%
Bootstrap support for Q4QC21 as seed ortholog is 99%.
Bootstrap support for A3LQL8 as seed ortholog is 99%.

Group of orthologs #676. Best score 155 bits
Score difference with first non-orthologous sequence - L.major:155 S.stipitis:155

Q4QIE6              	100.00%		A3LR45              	100.00%
Bootstrap support for Q4QIE6 as seed ortholog is 100%.
Bootstrap support for A3LR45 as seed ortholog is 100%.

Group of orthologs #677. Best score 154 bits
Score difference with first non-orthologous sequence - L.major:154 S.stipitis:154

Q4Q1F6              	100.00%		A3GH50              	100.00%
Bootstrap support for Q4Q1F6 as seed ortholog is 100%.
Bootstrap support for A3GH50 as seed ortholog is 100%.

Group of orthologs #678. Best score 154 bits
Score difference with first non-orthologous sequence - L.major:61 S.stipitis:34

E9AEJ0              	100.00%		A3LR85              	100.00%
Bootstrap support for E9AEJ0 as seed ortholog is 99%.
Bootstrap support for A3LR85 as seed ortholog is 90%.

Group of orthologs #679. Best score 154 bits
Score difference with first non-orthologous sequence - L.major:154 S.stipitis:154

Q4QA21              	100.00%		A3LV26              	100.00%
Bootstrap support for Q4QA21 as seed ortholog is 100%.
Bootstrap support for A3LV26 as seed ortholog is 100%.

Group of orthologs #680. Best score 154 bits
Score difference with first non-orthologous sequence - L.major:154 S.stipitis:154

Q4QGY9              	100.00%		A3LSX2              	100.00%
Bootstrap support for Q4QGY9 as seed ortholog is 100%.
Bootstrap support for A3LSX2 as seed ortholog is 100%.

Group of orthologs #681. Best score 153 bits
Score difference with first non-orthologous sequence - L.major:153 S.stipitis:153

E9ADS7              	100.00%		A3LN05              	100.00%
Bootstrap support for E9ADS7 as seed ortholog is 100%.
Bootstrap support for A3LN05 as seed ortholog is 100%.

Group of orthologs #682. Best score 153 bits
Score difference with first non-orthologous sequence - L.major:81 S.stipitis:57

E9ACB4              	100.00%		A3LZ35              	100.00%
Bootstrap support for E9ACB4 as seed ortholog is 99%.
Bootstrap support for A3LZ35 as seed ortholog is 99%.

Group of orthologs #683. Best score 153 bits
Score difference with first non-orthologous sequence - L.major:76 S.stipitis:153

Q4Q2N5              	100.00%		A3LZY0              	100.00%
Bootstrap support for Q4Q2N5 as seed ortholog is 95%.
Bootstrap support for A3LZY0 as seed ortholog is 100%.

Group of orthologs #684. Best score 153 bits
Score difference with first non-orthologous sequence - L.major:97 S.stipitis:153

Q4QFZ6              	100.00%		A3GI69              	100.00%
Bootstrap support for Q4QFZ6 as seed ortholog is 100%.
Bootstrap support for A3GI69 as seed ortholog is 100%.

Group of orthologs #685. Best score 153 bits
Score difference with first non-orthologous sequence - L.major:153 S.stipitis:153

Q4QH62              	100.00%		A3GH77              	100.00%
Bootstrap support for Q4QH62 as seed ortholog is 100%.
Bootstrap support for A3GH77 as seed ortholog is 100%.

Group of orthologs #686. Best score 153 bits
Score difference with first non-orthologous sequence - L.major:153 S.stipitis:153

Q4QGC8              	100.00%		A3GI98              	100.00%
Bootstrap support for Q4QGC8 as seed ortholog is 100%.
Bootstrap support for A3GI98 as seed ortholog is 100%.

Group of orthologs #687. Best score 153 bits
Score difference with first non-orthologous sequence - L.major:153 S.stipitis:153

Q4QAT9              	100.00%		A3LVQ8              	100.00%
Bootstrap support for Q4QAT9 as seed ortholog is 100%.
Bootstrap support for A3LVQ8 as seed ortholog is 100%.

Group of orthologs #688. Best score 153 bits
Score difference with first non-orthologous sequence - L.major:2 S.stipitis:153

Q4QBU1              	100.00%		A3LW70              	100.00%
Bootstrap support for Q4QBU1 as seed ortholog is 77%.
Bootstrap support for A3LW70 as seed ortholog is 100%.

Group of orthologs #689. Best score 153 bits
Score difference with first non-orthologous sequence - L.major:153 S.stipitis:153

Q4QET4              	100.00%		A3LTL4              	100.00%
Bootstrap support for Q4QET4 as seed ortholog is 100%.
Bootstrap support for A3LTL4 as seed ortholog is 100%.

Group of orthologs #690. Best score 153 bits
Score difference with first non-orthologous sequence - L.major:153 S.stipitis:153

Q4QB74              	100.00%		A3LXT1              	100.00%
Bootstrap support for Q4QB74 as seed ortholog is 100%.
Bootstrap support for A3LXT1 as seed ortholog is 100%.

Group of orthologs #691. Best score 152 bits
Score difference with first non-orthologous sequence - L.major:152 S.stipitis:152

Q4Q9G0              	100.00%		A3LZ36              	100.00%
                    	       		A3LR80              	7.47%
Bootstrap support for Q4Q9G0 as seed ortholog is 100%.
Bootstrap support for A3LZ36 as seed ortholog is 100%.

Group of orthologs #692. Best score 151 bits
Score difference with first non-orthologous sequence - L.major:22 S.stipitis:34

Q4QEV9              	100.00%		A3GHN6              	100.00%
Q4QHB5              	100.00%		A3LXD5              	100.00%
Bootstrap support for Q4QEV9 as seed ortholog is 87%.
Bootstrap support for Q4QHB5 as seed ortholog is 86%.
Bootstrap support for A3GHN6 as seed ortholog is 94%.
Bootstrap support for A3LXD5 as seed ortholog is 94%.

Group of orthologs #693. Best score 151 bits
Score difference with first non-orthologous sequence - L.major:151 S.stipitis:151

E9AFQ9              	100.00%		A3GFZ8              	100.00%
                    	       		A3LVI6              	10.12%
Bootstrap support for E9AFQ9 as seed ortholog is 100%.
Bootstrap support for A3GFZ8 as seed ortholog is 100%.

Group of orthologs #694. Best score 151 bits
Score difference with first non-orthologous sequence - L.major:151 S.stipitis:151

Q4QDZ4              	100.00%		A3LQ24              	100.00%
Bootstrap support for Q4QDZ4 as seed ortholog is 100%.
Bootstrap support for A3LQ24 as seed ortholog is 100%.

Group of orthologs #695. Best score 151 bits
Score difference with first non-orthologous sequence - L.major:151 S.stipitis:151

Q4QEL2              	100.00%		A3LRW1              	100.00%
Bootstrap support for Q4QEL2 as seed ortholog is 100%.
Bootstrap support for A3LRW1 as seed ortholog is 100%.

Group of orthologs #696. Best score 151 bits
Score difference with first non-orthologous sequence - L.major:55 S.stipitis:87

Q9U1D3              	100.00%		A3LXB0              	100.00%
Bootstrap support for Q9U1D3 as seed ortholog is 97%.
Bootstrap support for A3LXB0 as seed ortholog is 99%.

Group of orthologs #697. Best score 150 bits
Score difference with first non-orthologous sequence - L.major:150 S.stipitis:150

Q4QF32              	100.00%		A3GHK4              	100.00%
Bootstrap support for Q4QF32 as seed ortholog is 100%.
Bootstrap support for A3GHK4 as seed ortholog is 100%.

Group of orthologs #698. Best score 150 bits
Score difference with first non-orthologous sequence - L.major:150 S.stipitis:150

Q8ISS8              	100.00%		A3LSC6              	100.00%
Bootstrap support for Q8ISS8 as seed ortholog is 100%.
Bootstrap support for A3LSC6 as seed ortholog is 100%.

Group of orthologs #699. Best score 149 bits
Score difference with first non-orthologous sequence - L.major:149 S.stipitis:149

E9AE03              	100.00%		A3M047              	100.00%
Bootstrap support for E9AE03 as seed ortholog is 100%.
Bootstrap support for A3M047 as seed ortholog is 100%.

Group of orthologs #700. Best score 149 bits
Score difference with first non-orthologous sequence - L.major:149 S.stipitis:149

Q4QGD8              	100.00%		A3LN26              	100.00%
Bootstrap support for Q4QGD8 as seed ortholog is 100%.
Bootstrap support for A3LN26 as seed ortholog is 100%.

Group of orthologs #701. Best score 148 bits
Score difference with first non-orthologous sequence - L.major:148 S.stipitis:148

E9AFA6              	100.00%		A3LV21              	100.00%
E9AFA5              	10.79%		A3LU73              	40.83%
E9AFA2              	8.44%		A3LRD8              	36.81%
                    	       		A3LV20              	33.77%
                    	       		A3LXG2              	20.96%
                    	       		A3GGH1              	20.52%
                    	       		A3LVX6              	17.81%
                    	       		A3GGH0              	8.69%
Bootstrap support for E9AFA6 as seed ortholog is 100%.
Bootstrap support for A3LV21 as seed ortholog is 100%.

Group of orthologs #702. Best score 148 bits
Score difference with first non-orthologous sequence - L.major:148 S.stipitis:148

Q4Q1A2              	100.00%		A3LSM1              	100.00%
Bootstrap support for Q4Q1A2 as seed ortholog is 100%.
Bootstrap support for A3LSM1 as seed ortholog is 100%.

Group of orthologs #703. Best score 148 bits
Score difference with first non-orthologous sequence - L.major:148 S.stipitis:148

Q4Q9A5              	100.00%		A3LX39              	100.00%
Bootstrap support for Q4Q9A5 as seed ortholog is 100%.
Bootstrap support for A3LX39 as seed ortholog is 100%.

Group of orthologs #704. Best score 148 bits
Score difference with first non-orthologous sequence - L.major:148 S.stipitis:148

Q4QB25              	100.00%		A3LZ84              	100.00%
Bootstrap support for Q4QB25 as seed ortholog is 100%.
Bootstrap support for A3LZ84 as seed ortholog is 100%.

Group of orthologs #705. Best score 148 bits
Score difference with first non-orthologous sequence - L.major:52 S.stipitis:148

Q4QCL6              	100.00%		A3LZW2              	100.00%
Bootstrap support for Q4QCL6 as seed ortholog is 98%.
Bootstrap support for A3LZW2 as seed ortholog is 100%.

Group of orthologs #706. Best score 147 bits
Score difference with first non-orthologous sequence - L.major:1 S.stipitis:49

Q4QBX3              	100.00%		A3LTB1              	100.00%
Q4Q6K5              	28.79%		A3LN92              	24.23%
Q4Q509              	27.72%		
E9AD45              	27.12%		
E9AD44              	26.16%		
Q4Q6M9              	26.16%		
Q4Q6N0              	26.05%		
Q4Q6M8              	25.93%		
E9ADD7              	25.57%		
Q4Q6N1              	25.33%		
Q4Q6H5              	24.97%		
Q4QIH0              	23.18%		
Q4Q682              	22.10%		
Q4Q6K6              	21.86%		
Q4Q680              	21.62%		
Q4Q683              	21.51%		
Bootstrap support for Q4QBX3 as seed ortholog is 79%.
Bootstrap support for A3LTB1 as seed ortholog is 66%.
Alternative seed ortholog is A3LR42 (49 bits away from this cluster)

Group of orthologs #707. Best score 147 bits
Score difference with first non-orthologous sequence - L.major:147 S.stipitis:147

Q66NE0              	100.00%		A3LPZ2              	100.00%
Q4Q434              	6.00%		
Bootstrap support for Q66NE0 as seed ortholog is 100%.
Bootstrap support for A3LPZ2 as seed ortholog is 100%.

Group of orthologs #708. Best score 147 bits
Score difference with first non-orthologous sequence - L.major:147 S.stipitis:147

Q4Q5L4              	100.00%		A3GH22              	100.00%
Bootstrap support for Q4Q5L4 as seed ortholog is 100%.
Bootstrap support for A3GH22 as seed ortholog is 100%.

Group of orthologs #709. Best score 147 bits
Score difference with first non-orthologous sequence - L.major:147 S.stipitis:147

Q4Q7N6              	100.00%		A3GF78              	100.00%
Bootstrap support for Q4Q7N6 as seed ortholog is 100%.
Bootstrap support for A3GF78 as seed ortholog is 100%.

Group of orthologs #710. Best score 147 bits
Score difference with first non-orthologous sequence - L.major:147 S.stipitis:147

Q4Q6X9              	100.00%		A3LZD3              	100.00%
Bootstrap support for Q4Q6X9 as seed ortholog is 100%.
Bootstrap support for A3LZD3 as seed ortholog is 100%.

Group of orthologs #711. Best score 147 bits
Score difference with first non-orthologous sequence - L.major:147 S.stipitis:147

Q95Z86              	100.00%		A3LXV4              	100.00%
Bootstrap support for Q95Z86 as seed ortholog is 100%.
Bootstrap support for A3LXV4 as seed ortholog is 100%.

Group of orthologs #712. Best score 146 bits
Score difference with first non-orthologous sequence - L.major:60 S.stipitis:55

Q4QGV7              	100.00%		A3LWS3              	100.00%
Q4QGW0              	100.00%		A3LR58              	100.00%
Q4QGV5              	100.00%		
E9AD74              	50.07%		
E9AD75              	50.07%		
Q4QGV3              	49.02%		
Q4QGV8              	44.19%		
E9ACA5              	34.51%		
Q4QFA9              	32.18%		
E9ADR4              	14.36%		
Bootstrap support for Q4QGV7 as seed ortholog is 98%.
Bootstrap support for Q4QGW0 as seed ortholog is 98%.
Bootstrap support for Q4QGV5 as seed ortholog is 88%.
Bootstrap support for A3LWS3 as seed ortholog is 80%.
Bootstrap support for A3LR58 as seed ortholog is 61%.
Alternative seed ortholog is A3LPB4 (55 bits away from this cluster)

Group of orthologs #713. Best score 146 bits
Score difference with first non-orthologous sequence - L.major:146 S.stipitis:146

Q4Q2W7              	100.00%		A3GHQ2              	100.00%
Bootstrap support for Q4Q2W7 as seed ortholog is 100%.
Bootstrap support for A3GHQ2 as seed ortholog is 100%.

Group of orthologs #714. Best score 146 bits
Score difference with first non-orthologous sequence - L.major:146 S.stipitis:146

Q4Q1H1              	100.00%		A3LVB4              	100.00%
Bootstrap support for Q4Q1H1 as seed ortholog is 100%.
Bootstrap support for A3LVB4 as seed ortholog is 100%.

Group of orthologs #715. Best score 146 bits
Score difference with first non-orthologous sequence - L.major:7 S.stipitis:146

Q4QJD4              	100.00%		A3LQ82              	100.00%
Bootstrap support for Q4QJD4 as seed ortholog is 60%.
Alternative seed ortholog is E9AC48 (7 bits away from this cluster)
Bootstrap support for A3LQ82 as seed ortholog is 100%.

Group of orthologs #716. Best score 146 bits
Score difference with first non-orthologous sequence - L.major:66 S.stipitis:146

Q4QDB4              	100.00%		A3LXZ1              	100.00%
Bootstrap support for Q4QDB4 as seed ortholog is 90%.
Bootstrap support for A3LXZ1 as seed ortholog is 100%.

Group of orthologs #717. Best score 145 bits
Score difference with first non-orthologous sequence - L.major:53 S.stipitis:74

Q4QAA1              	100.00%		A3GH14              	100.00%
Bootstrap support for Q4QAA1 as seed ortholog is 85%.
Bootstrap support for A3GH14 as seed ortholog is 91%.

Group of orthologs #718. Best score 145 bits
Score difference with first non-orthologous sequence - L.major:3 S.stipitis:145

Q4QIJ9              	100.00%		A3LPL1              	100.00%
Bootstrap support for Q4QIJ9 as seed ortholog is 75%.
Bootstrap support for A3LPL1 as seed ortholog is 100%.

Group of orthologs #719. Best score 145 bits
Score difference with first non-orthologous sequence - L.major:22 S.stipitis:28

Q4QBT6              	100.00%		A3LY45              	100.00%
Bootstrap support for Q4QBT6 as seed ortholog is 62%.
Alternative seed ortholog is Q4QAB7 (22 bits away from this cluster)
Bootstrap support for A3LY45 as seed ortholog is 70%.
Alternative seed ortholog is A3LS38 (28 bits away from this cluster)

Group of orthologs #720. Best score 144 bits
Score difference with first non-orthologous sequence - L.major:1 S.stipitis:144

Q4Q216              	100.00%		A3LZL7              	100.00%
Q4QFK7              	100.00%		
Bootstrap support for Q4Q216 as seed ortholog is 56%.
Alternative seed ortholog is P69201 (1 bits away from this cluster)
Bootstrap support for Q4QFK7 as seed ortholog is 62%.
Alternative seed ortholog is P69201 (1 bits away from this cluster)
Bootstrap support for A3LZL7 as seed ortholog is 100%.

Group of orthologs #721. Best score 144 bits
Score difference with first non-orthologous sequence - L.major:144 S.stipitis:144

Q4QBV0              	100.00%		A3GHH8              	100.00%
Bootstrap support for Q4QBV0 as seed ortholog is 100%.
Bootstrap support for A3GHH8 as seed ortholog is 100%.

Group of orthologs #722. Best score 144 bits
Score difference with first non-orthologous sequence - L.major:144 S.stipitis:144

Q4Q824              	100.00%		A3LYA6              	100.00%
Bootstrap support for Q4Q824 as seed ortholog is 100%.
Bootstrap support for A3LYA6 as seed ortholog is 100%.

Group of orthologs #723. Best score 143 bits
Score difference with first non-orthologous sequence - L.major:143 S.stipitis:143

Q4Q7H9              	100.00%		A3GFS4              	100.00%
                    	       		A3LV36              	6.43%
Bootstrap support for Q4Q7H9 as seed ortholog is 100%.
Bootstrap support for A3GFS4 as seed ortholog is 100%.

Group of orthologs #724. Best score 143 bits
Score difference with first non-orthologous sequence - L.major:143 S.stipitis:143

Q4Q627              	100.00%		A3LPM6              	100.00%
                    	       		A3LSX4              	19.33%
Bootstrap support for Q4Q627 as seed ortholog is 100%.
Bootstrap support for A3LPM6 as seed ortholog is 100%.

Group of orthologs #725. Best score 143 bits
Score difference with first non-orthologous sequence - L.major:143 S.stipitis:143

Q4Q0A5              	100.00%		A3LQG4              	100.00%
Bootstrap support for Q4Q0A5 as seed ortholog is 100%.
Bootstrap support for A3LQG4 as seed ortholog is 100%.

Group of orthologs #726. Best score 143 bits
Score difference with first non-orthologous sequence - L.major:12 S.stipitis:143

Q4Q481              	100.00%		A3LVL2              	100.00%
Bootstrap support for Q4Q481 as seed ortholog is 72%.
Alternative seed ortholog is Q4Q1J5 (12 bits away from this cluster)
Bootstrap support for A3LVL2 as seed ortholog is 100%.

Group of orthologs #727. Best score 143 bits
Score difference with first non-orthologous sequence - L.major:143 S.stipitis:143

Q4QFB6              	100.00%		A3GI00              	100.00%
Bootstrap support for Q4QFB6 as seed ortholog is 100%.
Bootstrap support for A3GI00 as seed ortholog is 100%.

Group of orthologs #728. Best score 143 bits
Score difference with first non-orthologous sequence - L.major:143 S.stipitis:143

Q4QG98              	100.00%		A3LZT9              	100.00%
Bootstrap support for Q4QG98 as seed ortholog is 100%.
Bootstrap support for A3LZT9 as seed ortholog is 100%.

Group of orthologs #729. Best score 143 bits
Score difference with first non-orthologous sequence - L.major:143 S.stipitis:143

Q4QJG1              	100.00%		A3M0F8              	100.00%
Bootstrap support for Q4QJG1 as seed ortholog is 100%.
Bootstrap support for A3M0F8 as seed ortholog is 100%.

Group of orthologs #730. Best score 142 bits
Score difference with first non-orthologous sequence - L.major:16 S.stipitis:142

Q4Q9H2              	100.00%		A3LMV1              	100.00%
                    	       		A3LSI3              	12.84%
Bootstrap support for Q4Q9H2 as seed ortholog is 68%.
Alternative seed ortholog is Q4Q4F4 (16 bits away from this cluster)
Bootstrap support for A3LMV1 as seed ortholog is 100%.

Group of orthologs #731. Best score 142 bits
Score difference with first non-orthologous sequence - L.major:142 S.stipitis:142

E9AEZ2              	100.00%		A3LYF2              	100.00%
Bootstrap support for E9AEZ2 as seed ortholog is 100%.
Bootstrap support for A3LYF2 as seed ortholog is 100%.

Group of orthologs #732. Best score 142 bits
Score difference with first non-orthologous sequence - L.major:142 S.stipitis:142

Q4QAY6              	100.00%		A3LVD1              	100.00%
Bootstrap support for Q4QAY6 as seed ortholog is 100%.
Bootstrap support for A3LVD1 as seed ortholog is 100%.

Group of orthologs #733. Best score 142 bits
Score difference with first non-orthologous sequence - L.major:65 S.stipitis:142

Q4QDN1              	100.00%		A3LVV3              	100.00%
Bootstrap support for Q4QDN1 as seed ortholog is 96%.
Bootstrap support for A3LVV3 as seed ortholog is 100%.

Group of orthologs #734. Best score 141 bits
Score difference with first non-orthologous sequence - L.major:141 S.stipitis:141

Q4Q632              	100.00%		A3LQ40              	100.00%
Bootstrap support for Q4Q632 as seed ortholog is 100%.
Bootstrap support for A3LQ40 as seed ortholog is 100%.

Group of orthologs #735. Best score 141 bits
Score difference with first non-orthologous sequence - L.major:141 S.stipitis:141

Q4Q5S1              	100.00%		A3LS44              	100.00%
Bootstrap support for Q4Q5S1 as seed ortholog is 100%.
Bootstrap support for A3LS44 as seed ortholog is 100%.

Group of orthologs #736. Best score 140 bits
Score difference with first non-orthologous sequence - L.major:76 S.stipitis:41

Q4QA75              	100.00%		A3GHH9              	100.00%
Bootstrap support for Q4QA75 as seed ortholog is 97%.
Bootstrap support for A3GHH9 as seed ortholog is 86%.

Group of orthologs #737. Best score 140 bits
Score difference with first non-orthologous sequence - L.major:88 S.stipitis:140

Q4Q222              	100.00%		A3LZ40              	100.00%
Bootstrap support for Q4Q222 as seed ortholog is 98%.
Bootstrap support for A3LZ40 as seed ortholog is 100%.

Group of orthologs #738. Best score 140 bits
Score difference with first non-orthologous sequence - L.major:140 S.stipitis:140

Q9BIR6              	100.00%		A3LWX1              	100.00%
Bootstrap support for Q9BIR6 as seed ortholog is 100%.
Bootstrap support for A3LWX1 as seed ortholog is 100%.

Group of orthologs #739. Best score 139 bits
Score difference with first non-orthologous sequence - L.major:139 S.stipitis:139

E9AEA9              	100.00%		A3LX38              	100.00%
E9AEA8              	98.35%		
Bootstrap support for E9AEA9 as seed ortholog is 100%.
Bootstrap support for A3LX38 as seed ortholog is 100%.

Group of orthologs #740. Best score 139 bits
Score difference with first non-orthologous sequence - L.major:139 S.stipitis:139

E9AG00              	100.00%		A3LQC7              	100.00%
Bootstrap support for E9AG00 as seed ortholog is 100%.
Bootstrap support for A3LQC7 as seed ortholog is 100%.

Group of orthologs #741. Best score 139 bits
Score difference with first non-orthologous sequence - L.major:139 S.stipitis:139

Q4Q5X0              	100.00%		A3LS75              	100.00%
Bootstrap support for Q4Q5X0 as seed ortholog is 100%.
Bootstrap support for A3LS75 as seed ortholog is 100%.

Group of orthologs #742. Best score 139 bits
Score difference with first non-orthologous sequence - L.major:139 S.stipitis:139

Q4QD72              	100.00%		A3GG11              	100.00%
Bootstrap support for Q4QD72 as seed ortholog is 100%.
Bootstrap support for A3GG11 as seed ortholog is 100%.

Group of orthologs #743. Best score 139 bits
Score difference with first non-orthologous sequence - L.major:139 S.stipitis:139

Q4Q622              	100.00%		A3LTE1              	100.00%
Bootstrap support for Q4Q622 as seed ortholog is 100%.
Bootstrap support for A3LTE1 as seed ortholog is 100%.

Group of orthologs #744. Best score 139 bits
Score difference with first non-orthologous sequence - L.major:139 S.stipitis:139

Q4Q4J0              	100.00%		A3LX85              	100.00%
Bootstrap support for Q4Q4J0 as seed ortholog is 100%.
Bootstrap support for A3LX85 as seed ortholog is 100%.

Group of orthologs #745. Best score 138 bits
Score difference with first non-orthologous sequence - L.major:138 S.stipitis:138

Q66NE2              	100.00%		A3LSA0              	100.00%
Q4Q3C1              	56.00%		
Bootstrap support for Q66NE2 as seed ortholog is 100%.
Bootstrap support for A3LSA0 as seed ortholog is 100%.

Group of orthologs #746. Best score 138 bits
Score difference with first non-orthologous sequence - L.major:138 S.stipitis:138

Q4Q0U9              	100.00%		A3LXP5              	100.00%
Bootstrap support for Q4Q0U9 as seed ortholog is 100%.
Bootstrap support for A3LXP5 as seed ortholog is 100%.

Group of orthologs #747. Best score 138 bits
Score difference with first non-orthologous sequence - L.major:70 S.stipitis:7

Q4Q5I6              	100.00%		A3LY37              	100.00%
Bootstrap support for Q4Q5I6 as seed ortholog is 99%.
Bootstrap support for A3LY37 as seed ortholog is 55%.
Alternative seed ortholog is A3LS38 (7 bits away from this cluster)

Group of orthologs #748. Best score 137 bits
Score difference with first non-orthologous sequence - L.major:55 S.stipitis:137

Q4Q9B3              	100.00%		A3GFQ6              	100.00%
                    	       		A3LUW2              	13.69%
Bootstrap support for Q4Q9B3 as seed ortholog is 98%.
Bootstrap support for A3GFQ6 as seed ortholog is 100%.

Group of orthologs #749. Best score 137 bits
Score difference with first non-orthologous sequence - L.major:137 S.stipitis:137

Q4Q3L3              	100.00%		A3LQA4              	100.00%
Bootstrap support for Q4Q3L3 as seed ortholog is 100%.
Bootstrap support for A3LQA4 as seed ortholog is 100%.

Group of orthologs #750. Best score 137 bits
Score difference with first non-orthologous sequence - L.major:137 S.stipitis:137

Q4Q9R2              	100.00%		A3GGS3              	100.00%
Bootstrap support for Q4Q9R2 as seed ortholog is 100%.
Bootstrap support for A3GGS3 as seed ortholog is 100%.

Group of orthologs #751. Best score 137 bits
Score difference with first non-orthologous sequence - L.major:89 S.stipitis:70

Q4Q9Q4              	100.00%		A3GI13              	100.00%
Bootstrap support for Q4Q9Q4 as seed ortholog is 99%.
Bootstrap support for A3GI13 as seed ortholog is 97%.

Group of orthologs #752. Best score 137 bits
Score difference with first non-orthologous sequence - L.major:137 S.stipitis:137

Q4Q5I7              	100.00%		A3LS37              	100.00%
Bootstrap support for Q4Q5I7 as seed ortholog is 100%.
Bootstrap support for A3LS37 as seed ortholog is 100%.

Group of orthologs #753. Best score 137 bits
Score difference with first non-orthologous sequence - L.major:137 S.stipitis:137

Q4Q7M2              	100.00%		A3LWD7              	100.00%
Bootstrap support for Q4Q7M2 as seed ortholog is 100%.
Bootstrap support for A3LWD7 as seed ortholog is 100%.

Group of orthologs #754. Best score 136 bits
Score difference with first non-orthologous sequence - L.major:18 S.stipitis:136

Q4Q3H7              	100.00%		A3LT93              	100.00%
Bootstrap support for Q4Q3H7 as seed ortholog is 70%.
Alternative seed ortholog is Q4Q9E9 (18 bits away from this cluster)
Bootstrap support for A3LT93 as seed ortholog is 100%.

Group of orthologs #755. Best score 135 bits
Score difference with first non-orthologous sequence - L.major:135 S.stipitis:135

E9AFG4              	100.00%		A3LRK1              	100.00%
Q4QHS2              	6.70%		A3GG49              	25.39%
Q4Q5N2              	5.36%		
Bootstrap support for E9AFG4 as seed ortholog is 100%.
Bootstrap support for A3LRK1 as seed ortholog is 100%.

Group of orthologs #756. Best score 135 bits
Score difference with first non-orthologous sequence - L.major:135 S.stipitis:135

Q4QFY6              	100.00%		A3LST6              	100.00%
Bootstrap support for Q4QFY6 as seed ortholog is 100%.
Bootstrap support for A3LST6 as seed ortholog is 100%.

Group of orthologs #757. Best score 135 bits
Score difference with first non-orthologous sequence - L.major:135 S.stipitis:135

Q4QIS5              	100.00%		A3LZR1              	100.00%
Bootstrap support for Q4QIS5 as seed ortholog is 100%.
Bootstrap support for A3LZR1 as seed ortholog is 100%.

Group of orthologs #758. Best score 134 bits
Score difference with first non-orthologous sequence - L.major:134 S.stipitis:134

E9ACG6              	100.00%		A3GG10              	100.00%
Bootstrap support for E9ACG6 as seed ortholog is 100%.
Bootstrap support for A3GG10 as seed ortholog is 100%.

Group of orthologs #759. Best score 134 bits
Score difference with first non-orthologous sequence - L.major:134 S.stipitis:134

E9AFB8              	100.00%		A3GFJ9              	100.00%
Bootstrap support for E9AFB8 as seed ortholog is 100%.
Bootstrap support for A3GFJ9 as seed ortholog is 100%.

Group of orthologs #760. Best score 134 bits
Score difference with first non-orthologous sequence - L.major:134 S.stipitis:134

Q4Q9S3              	100.00%		A3LXF6              	100.00%
Bootstrap support for Q4Q9S3 as seed ortholog is 100%.
Bootstrap support for A3LXF6 as seed ortholog is 100%.

Group of orthologs #761. Best score 133 bits
Score difference with first non-orthologous sequence - L.major:133 S.stipitis:133

Q4Q4Q4              	100.00%		A3LXK5              	100.00%
Q4Q4Q6              	16.35%		
Q4Q4Q5              	16.19%		
Bootstrap support for Q4Q4Q4 as seed ortholog is 100%.
Bootstrap support for A3LXK5 as seed ortholog is 100%.

Group of orthologs #762. Best score 133 bits
Score difference with first non-orthologous sequence - L.major:133 S.stipitis:133

E9AD19              	100.00%		A3GI10              	100.00%
Bootstrap support for E9AD19 as seed ortholog is 100%.
Bootstrap support for A3GI10 as seed ortholog is 100%.

Group of orthologs #763. Best score 133 bits
Score difference with first non-orthologous sequence - L.major:57 S.stipitis:45

E9AEE0              	100.00%		A3LTX0              	100.00%
Bootstrap support for E9AEE0 as seed ortholog is 94%.
Bootstrap support for A3LTX0 as seed ortholog is 81%.

Group of orthologs #764. Best score 133 bits
Score difference with first non-orthologous sequence - L.major:133 S.stipitis:133

Q4QAC5              	100.00%		A3LR81              	100.00%
Bootstrap support for Q4QAC5 as seed ortholog is 100%.
Bootstrap support for A3LR81 as seed ortholog is 100%.

Group of orthologs #765. Best score 133 bits
Score difference with first non-orthologous sequence - L.major:133 S.stipitis:133

Q9NE54              	100.00%		A3GGT4              	100.00%
Bootstrap support for Q9NE54 as seed ortholog is 100%.
Bootstrap support for A3GGT4 as seed ortholog is 100%.

Group of orthologs #766. Best score 133 bits
Score difference with first non-orthologous sequence - L.major:62 S.stipitis:133

Q4QHK9              	100.00%		A3LVM1              	100.00%
Bootstrap support for Q4QHK9 as seed ortholog is 89%.
Bootstrap support for A3LVM1 as seed ortholog is 100%.

Group of orthologs #767. Best score 132 bits
Score difference with first non-orthologous sequence - L.major:36 S.stipitis:28

Q4QF00              	100.00%		A3LWZ7              	100.00%
                    	       		A3LRW8              	18.49%
                    	       		A3GGM3              	8.17%
                    	       		A3LV75              	5.16%
Bootstrap support for Q4QF00 as seed ortholog is 85%.
Bootstrap support for A3LWZ7 as seed ortholog is 77%.

Group of orthologs #768. Best score 132 bits
Score difference with first non-orthologous sequence - L.major:67 S.stipitis:132

Q4Q3S5              	100.00%		A3LZ87              	100.00%
Bootstrap support for Q4Q3S5 as seed ortholog is 94%.
Bootstrap support for A3LZ87 as seed ortholog is 100%.

Group of orthologs #769. Best score 131 bits
Score difference with first non-orthologous sequence - L.major:131 S.stipitis:131

Q4Q0C9              	100.00%		A3LQC9              	100.00%
Bootstrap support for Q4Q0C9 as seed ortholog is 100%.
Bootstrap support for A3LQC9 as seed ortholog is 100%.

Group of orthologs #770. Best score 131 bits
Score difference with first non-orthologous sequence - L.major:131 S.stipitis:131

Q4Q6V9              	100.00%		A3LRM3              	100.00%
Bootstrap support for Q4Q6V9 as seed ortholog is 100%.
Bootstrap support for A3LRM3 as seed ortholog is 100%.

Group of orthologs #771. Best score 131 bits
Score difference with first non-orthologous sequence - L.major:131 S.stipitis:131

Q4Q859              	100.00%		A3M0L4              	100.00%
Bootstrap support for Q4Q859 as seed ortholog is 100%.
Bootstrap support for A3M0L4 as seed ortholog is 100%.

Group of orthologs #772. Best score 131 bits
Score difference with first non-orthologous sequence - L.major:131 S.stipitis:131

Q4QFY3              	100.00%		A3LTN3              	100.00%
Bootstrap support for Q4QFY3 as seed ortholog is 100%.
Bootstrap support for A3LTN3 as seed ortholog is 100%.

Group of orthologs #773. Best score 131 bits
Score difference with first non-orthologous sequence - L.major:131 S.stipitis:131

Q4QIS4              	100.00%		A3M0J9              	100.00%
Bootstrap support for Q4QIS4 as seed ortholog is 100%.
Bootstrap support for A3M0J9 as seed ortholog is 100%.

Group of orthologs #774. Best score 130 bits
Score difference with first non-orthologous sequence - L.major:130 S.stipitis:130

Q4Q3L6              	100.00%		A3LU47              	100.00%
Q4Q5V0              	100.00%		A3LUM3              	100.00%
Q4Q873              	100.00%		
Q4Q5V1              	99.17%		
Bootstrap support for Q4Q3L6 as seed ortholog is 100%.
Bootstrap support for Q4Q5V0 as seed ortholog is 100%.
Bootstrap support for Q4Q873 as seed ortholog is 100%.
Bootstrap support for A3LU47 as seed ortholog is 100%.
Bootstrap support for A3LUM3 as seed ortholog is 100%.

Group of orthologs #775. Best score 130 bits
Score difference with first non-orthologous sequence - L.major:130 S.stipitis:130

Q4Q4D3              	100.00%		A3LX65              	100.00%
Q4QF84              	100.00%		
Bootstrap support for Q4Q4D3 as seed ortholog is 100%.
Bootstrap support for Q4QF84 as seed ortholog is 100%.
Bootstrap support for A3LX65 as seed ortholog is 100%.

Group of orthologs #776. Best score 130 bits
Score difference with first non-orthologous sequence - L.major:130 S.stipitis:130

Q4QJ31              	100.00%		A3GFA1              	100.00%
                    	       		A3GH12              	18.21%
Bootstrap support for Q4QJ31 as seed ortholog is 100%.
Bootstrap support for A3GFA1 as seed ortholog is 100%.

Group of orthologs #777. Best score 130 bits
Score difference with first non-orthologous sequence - L.major:130 S.stipitis:130

Q4Q5L0              	100.00%		A3LQL9              	100.00%
Bootstrap support for Q4Q5L0 as seed ortholog is 100%.
Bootstrap support for A3LQL9 as seed ortholog is 100%.

Group of orthologs #778. Best score 129 bits
Score difference with first non-orthologous sequence - L.major:39 S.stipitis:129

Q4Q7K8              	100.00%		A3LWN8              	100.00%
                    	       		A3LW38              	6.43%
Bootstrap support for Q4Q7K8 as seed ortholog is 78%.
Bootstrap support for A3LWN8 as seed ortholog is 100%.

Group of orthologs #779. Best score 129 bits
Score difference with first non-orthologous sequence - L.major:52 S.stipitis:67

Q4Q2Y6              	100.00%		A3LRA1              	100.00%
Bootstrap support for Q4Q2Y6 as seed ortholog is 88%.
Bootstrap support for A3LRA1 as seed ortholog is 95%.

Group of orthologs #780. Best score 129 bits
Score difference with first non-orthologous sequence - L.major:129 S.stipitis:129

Q4Q4U7              	100.00%		A3LS04              	100.00%
Bootstrap support for Q4Q4U7 as seed ortholog is 100%.
Bootstrap support for A3LS04 as seed ortholog is 100%.

Group of orthologs #781. Best score 129 bits
Score difference with first non-orthologous sequence - L.major:37 S.stipitis:39

Q4QBK4              	100.00%		A3LPE9              	100.00%
Bootstrap support for Q4QBK4 as seed ortholog is 97%.
Bootstrap support for A3LPE9 as seed ortholog is 98%.

Group of orthologs #782. Best score 129 bits
Score difference with first non-orthologous sequence - L.major:129 S.stipitis:129

Q4Q9C8              	100.00%		A3LZX8              	100.00%
Bootstrap support for Q4Q9C8 as seed ortholog is 100%.
Bootstrap support for A3LZX8 as seed ortholog is 100%.

Group of orthologs #783. Best score 128 bits
Score difference with first non-orthologous sequence - L.major:128 S.stipitis:128

Q4Q2H9              	100.00%		A3LRQ7              	100.00%
Q4QEX4              	100.00%		A3LVV1              	100.00%
Bootstrap support for Q4Q2H9 as seed ortholog is 100%.
Bootstrap support for Q4QEX4 as seed ortholog is 100%.
Bootstrap support for A3LRQ7 as seed ortholog is 100%.
Bootstrap support for A3LVV1 as seed ortholog is 100%.

Group of orthologs #784. Best score 128 bits
Score difference with first non-orthologous sequence - L.major:128 S.stipitis:128

Q4Q246              	100.00%		A3LQN2              	100.00%
Bootstrap support for Q4Q246 as seed ortholog is 100%.
Bootstrap support for A3LQN2 as seed ortholog is 100%.

Group of orthologs #785. Best score 128 bits
Score difference with first non-orthologous sequence - L.major:82 S.stipitis:128

Q4QD46              	100.00%		A3GFU8              	100.00%
Bootstrap support for Q4QD46 as seed ortholog is 99%.
Bootstrap support for A3GFU8 as seed ortholog is 100%.

Group of orthologs #786. Best score 128 bits
Score difference with first non-orthologous sequence - L.major:128 S.stipitis:128

Q4Q806              	100.00%		A3LQF1              	100.00%
Bootstrap support for Q4Q806 as seed ortholog is 100%.
Bootstrap support for A3LQF1 as seed ortholog is 100%.

Group of orthologs #787. Best score 128 bits
Score difference with first non-orthologous sequence - L.major:33 S.stipitis:128

Q4QEG6              	100.00%		A3GHC1              	100.00%
Bootstrap support for Q4QEG6 as seed ortholog is 90%.
Bootstrap support for A3GHC1 as seed ortholog is 100%.

Group of orthologs #788. Best score 127 bits
Score difference with first non-orthologous sequence - L.major:127 S.stipitis:127

Q4Q8U3              	100.00%		A3GF63              	100.00%
Bootstrap support for Q4Q8U3 as seed ortholog is 100%.
Bootstrap support for A3GF63 as seed ortholog is 100%.

Group of orthologs #789. Best score 127 bits
Score difference with first non-orthologous sequence - L.major:127 S.stipitis:127

Q4Q5J1              	100.00%		A3LN59              	100.00%
Bootstrap support for Q4Q5J1 as seed ortholog is 100%.
Bootstrap support for A3LN59 as seed ortholog is 100%.

Group of orthologs #790. Best score 127 bits
Score difference with first non-orthologous sequence - L.major:127 S.stipitis:127

Q4Q845              	100.00%		A3GH62              	100.00%
Bootstrap support for Q4Q845 as seed ortholog is 100%.
Bootstrap support for A3GH62 as seed ortholog is 100%.

Group of orthologs #791. Best score 127 bits
Score difference with first non-orthologous sequence - L.major:127 S.stipitis:127

Q4QFW1              	100.00%		A3LQG8              	100.00%
Bootstrap support for Q4QFW1 as seed ortholog is 100%.
Bootstrap support for A3LQG8 as seed ortholog is 100%.

Group of orthologs #792. Best score 127 bits
Score difference with first non-orthologous sequence - L.major:127 S.stipitis:127

Q4QBT9              	100.00%		A3LYU5              	100.00%
Bootstrap support for Q4QBT9 as seed ortholog is 100%.
Bootstrap support for A3LYU5 as seed ortholog is 100%.

Group of orthologs #793. Best score 127 bits
Score difference with first non-orthologous sequence - L.major:127 S.stipitis:127

Q4QIC4              	100.00%		A3LXS1              	100.00%
Bootstrap support for Q4QIC4 as seed ortholog is 100%.
Bootstrap support for A3LXS1 as seed ortholog is 100%.

Group of orthologs #794. Best score 126 bits
Score difference with first non-orthologous sequence - L.major:126 S.stipitis:126

Q4Q5J4              	100.00%		A3GGB0              	100.00%
Bootstrap support for Q4Q5J4 as seed ortholog is 100%.
Bootstrap support for A3GGB0 as seed ortholog is 100%.

Group of orthologs #795. Best score 126 bits
Score difference with first non-orthologous sequence - L.major:126 S.stipitis:126

E9AF35              	100.00%		A3LX25              	100.00%
Bootstrap support for E9AF35 as seed ortholog is 100%.
Bootstrap support for A3LX25 as seed ortholog is 100%.

Group of orthologs #796. Best score 126 bits
Score difference with first non-orthologous sequence - L.major:126 S.stipitis:126

Q4QBL3              	100.00%		A3LZP8              	100.00%
Bootstrap support for Q4QBL3 as seed ortholog is 100%.
Bootstrap support for A3LZP8 as seed ortholog is 100%.

Group of orthologs #797. Best score 125 bits
Score difference with first non-orthologous sequence - L.major:125 S.stipitis:125

Q4Q7A6              	100.00%		A3GFC5              	100.00%
Bootstrap support for Q4Q7A6 as seed ortholog is 100%.
Bootstrap support for A3GFC5 as seed ortholog is 100%.

Group of orthologs #798. Best score 125 bits
Score difference with first non-orthologous sequence - L.major:125 S.stipitis:125

Q4Q9S8              	100.00%		A3LNX5              	100.00%
Bootstrap support for Q4Q9S8 as seed ortholog is 100%.
Bootstrap support for A3LNX5 as seed ortholog is 100%.

Group of orthologs #799. Best score 125 bits
Score difference with first non-orthologous sequence - L.major:44 S.stipitis:49

Q4Q3K8              	100.00%		A3LXZ3              	100.00%
Bootstrap support for Q4Q3K8 as seed ortholog is 89%.
Bootstrap support for A3LXZ3 as seed ortholog is 95%.

Group of orthologs #800. Best score 125 bits
Score difference with first non-orthologous sequence - L.major:125 S.stipitis:125

Q4QII6              	100.00%		A3LPF1              	100.00%
Bootstrap support for Q4QII6 as seed ortholog is 100%.
Bootstrap support for A3LPF1 as seed ortholog is 100%.

Group of orthologs #801. Best score 124 bits
Score difference with first non-orthologous sequence - L.major:124 S.stipitis:124

Q4Q3U6              	100.00%		A3LSV9              	100.00%
Bootstrap support for Q4Q3U6 as seed ortholog is 100%.
Bootstrap support for A3LSV9 as seed ortholog is 100%.

Group of orthologs #802. Best score 124 bits
Score difference with first non-orthologous sequence - L.major:124 S.stipitis:124

Q4QDE0              	100.00%		A3GFA9              	100.00%
Bootstrap support for Q4QDE0 as seed ortholog is 100%.
Bootstrap support for A3GFA9 as seed ortholog is 100%.

Group of orthologs #803. Best score 124 bits
Score difference with first non-orthologous sequence - L.major:124 S.stipitis:124

Q4QG83              	100.00%		A3LNF6              	100.00%
Bootstrap support for Q4QG83 as seed ortholog is 100%.
Bootstrap support for A3LNF6 as seed ortholog is 100%.

Group of orthologs #804. Best score 123 bits
Score difference with first non-orthologous sequence - L.major:123 S.stipitis:123

Q4Q8S0              	100.00%		A3GIC7              	100.00%
Bootstrap support for Q4Q8S0 as seed ortholog is 100%.
Bootstrap support for A3GIC7 as seed ortholog is 100%.

Group of orthologs #805. Best score 123 bits
Score difference with first non-orthologous sequence - L.major:71 S.stipitis:123

Q4Q3B6              	100.00%		A3LVF6              	100.00%
Bootstrap support for Q4Q3B6 as seed ortholog is 99%.
Bootstrap support for A3LVF6 as seed ortholog is 100%.

Group of orthologs #806. Best score 123 bits
Score difference with first non-orthologous sequence - L.major:123 S.stipitis:123

Q4Q3H3              	100.00%		A3LVS9              	100.00%
Bootstrap support for Q4Q3H3 as seed ortholog is 100%.
Bootstrap support for A3LVS9 as seed ortholog is 100%.

Group of orthologs #807. Best score 122 bits
Score difference with first non-orthologous sequence - L.major:56 S.stipitis:14

Q4Q9H6              	100.00%		A3LNJ1              	100.00%
Q4Q9N6              	14.90%		
Bootstrap support for Q4Q9H6 as seed ortholog is 97%.
Bootstrap support for A3LNJ1 as seed ortholog is 68%.
Alternative seed ortholog is A3GGD6 (14 bits away from this cluster)

Group of orthologs #808. Best score 122 bits
Score difference with first non-orthologous sequence - L.major:122 S.stipitis:122

E9ACF7              	100.00%		A3LS61              	100.00%
Bootstrap support for E9ACF7 as seed ortholog is 100%.
Bootstrap support for A3LS61 as seed ortholog is 100%.

Group of orthologs #809. Best score 122 bits
Score difference with first non-orthologous sequence - L.major:122 S.stipitis:122

Q4Q9L9              	100.00%		A3LT34              	100.00%
Bootstrap support for Q4Q9L9 as seed ortholog is 100%.
Bootstrap support for A3LT34 as seed ortholog is 100%.

Group of orthologs #810. Best score 122 bits
Score difference with first non-orthologous sequence - L.major:122 S.stipitis:122

Q4QE54              	100.00%		A3LS45              	100.00%
Bootstrap support for Q4QE54 as seed ortholog is 100%.
Bootstrap support for A3LS45 as seed ortholog is 100%.

Group of orthologs #811. Best score 121 bits
Score difference with first non-orthologous sequence - L.major:121 S.stipitis:121

Q4Q1A9              	100.00%		A3LV74              	100.00%
Bootstrap support for Q4Q1A9 as seed ortholog is 100%.
Bootstrap support for A3LV74 as seed ortholog is 100%.

Group of orthologs #812. Best score 121 bits
Score difference with first non-orthologous sequence - L.major:121 S.stipitis:121

Q4Q4P1              	100.00%		A3LT39              	100.00%
Bootstrap support for Q4Q4P1 as seed ortholog is 100%.
Bootstrap support for A3LT39 as seed ortholog is 100%.

Group of orthologs #813. Best score 121 bits
Score difference with first non-orthologous sequence - L.major:121 S.stipitis:121

Q4QCB6              	100.00%		A3LQX1              	100.00%
Bootstrap support for Q4QCB6 as seed ortholog is 100%.
Bootstrap support for A3LQX1 as seed ortholog is 100%.

Group of orthologs #814. Best score 121 bits
Score difference with first non-orthologous sequence - L.major:121 S.stipitis:121

Q4QEV0              	100.00%		A3LR90              	100.00%
Bootstrap support for Q4QEV0 as seed ortholog is 100%.
Bootstrap support for A3LR90 as seed ortholog is 100%.

Group of orthologs #815. Best score 121 bits
Score difference with first non-orthologous sequence - L.major:121 S.stipitis:121

Q4QFI8              	100.00%		A3LSG9              	100.00%
Bootstrap support for Q4QFI8 as seed ortholog is 100%.
Bootstrap support for A3LSG9 as seed ortholog is 100%.

Group of orthologs #816. Best score 121 bits
Score difference with first non-orthologous sequence - L.major:121 S.stipitis:121

Q4QEM6              	100.00%		A3LUN1              	100.00%
Bootstrap support for Q4QEM6 as seed ortholog is 100%.
Bootstrap support for A3LUN1 as seed ortholog is 100%.

Group of orthologs #817. Best score 120 bits
Score difference with first non-orthologous sequence - L.major:120 S.stipitis:120

Q4Q7V8              	100.00%		A3LYI3              	100.00%
Q4QGZ4              	7.91%		A3LXL2              	10.12%
Bootstrap support for Q4Q7V8 as seed ortholog is 100%.
Bootstrap support for A3LYI3 as seed ortholog is 100%.

Group of orthologs #818. Best score 120 bits
Score difference with first non-orthologous sequence - L.major:120 S.stipitis:120

Q4Q9V2              	100.00%		A3LNR7              	100.00%
Bootstrap support for Q4Q9V2 as seed ortholog is 100%.
Bootstrap support for A3LNR7 as seed ortholog is 100%.

Group of orthologs #819. Best score 120 bits
Score difference with first non-orthologous sequence - L.major:16 S.stipitis:120

Q4Q4Y5              	100.00%		A3M0G9              	100.00%
Bootstrap support for Q4Q4Y5 as seed ortholog is 69%.
Alternative seed ortholog is Q4QCN3 (16 bits away from this cluster)
Bootstrap support for A3M0G9 as seed ortholog is 100%.

Group of orthologs #820. Best score 120 bits
Score difference with first non-orthologous sequence - L.major:120 S.stipitis:120

Q4QEN5              	100.00%		O13393              	100.00%
Bootstrap support for Q4QEN5 as seed ortholog is 100%.
Bootstrap support for O13393 as seed ortholog is 100%.

Group of orthologs #821. Best score 119 bits
Score difference with first non-orthologous sequence - L.major:119 S.stipitis:119

E9AC22              	100.00%		A3LTB4              	100.00%
Bootstrap support for E9AC22 as seed ortholog is 100%.
Bootstrap support for A3LTB4 as seed ortholog is 100%.

Group of orthologs #822. Best score 119 bits
Score difference with first non-orthologous sequence - L.major:119 S.stipitis:119

Q4Q546              	100.00%		A3GFI0              	100.00%
Bootstrap support for Q4Q546 as seed ortholog is 100%.
Bootstrap support for A3GFI0 as seed ortholog is 100%.

Group of orthologs #823. Best score 119 bits
Score difference with first non-orthologous sequence - L.major:119 S.stipitis:119

Q4QDA3              	100.00%		A3LN33              	100.00%
Bootstrap support for Q4QDA3 as seed ortholog is 100%.
Bootstrap support for A3LN33 as seed ortholog is 100%.

Group of orthologs #824. Best score 119 bits
Score difference with first non-orthologous sequence - L.major:119 S.stipitis:119

Q4QCD7              	100.00%		A3LQN8              	100.00%
Bootstrap support for Q4QCD7 as seed ortholog is 100%.
Bootstrap support for A3LQN8 as seed ortholog is 100%.

Group of orthologs #825. Best score 119 bits
Score difference with first non-orthologous sequence - L.major:119 S.stipitis:119

Q4QC01              	100.00%		A3LVS4              	100.00%
Bootstrap support for Q4QC01 as seed ortholog is 100%.
Bootstrap support for A3LVS4 as seed ortholog is 100%.

Group of orthologs #826. Best score 118 bits
Score difference with first non-orthologous sequence - L.major:34 S.stipitis:118

E9ACI3              	100.00%		A3LTI5              	40.23%
E9ACI5              	100.00%		A3LVY3              	100.00%
                    	       		A3LZX7              	23.72%
                    	       		A3LT17              	23.02%
                    	       		A3LT16              	22.56%
                    	       		A3LT18              	21.86%
                    	       		A3GG60              	21.16%
Bootstrap support for E9ACI3 as seed ortholog is 90%.
Bootstrap support for E9ACI5 as seed ortholog is 89%.
Bootstrap support for A3LVY3 as seed ortholog is 100%.

Group of orthologs #827. Best score 118 bits
Score difference with first non-orthologous sequence - L.major:118 S.stipitis:118

Q4Q4U0              	100.00%		A3LPH1              	100.00%
Q4Q9U4              	10.26%		A3LN44              	21.29%
Bootstrap support for Q4Q4U0 as seed ortholog is 100%.
Bootstrap support for A3LPH1 as seed ortholog is 100%.

Group of orthologs #828. Best score 118 bits
Score difference with first non-orthologous sequence - L.major:118 S.stipitis:118

E9ADL6              	100.00%		A3GF98              	100.00%
Bootstrap support for E9ADL6 as seed ortholog is 100%.
Bootstrap support for A3GF98 as seed ortholog is 100%.

Group of orthologs #829. Best score 118 bits
Score difference with first non-orthologous sequence - L.major:118 S.stipitis:118

Q4Q2Y3              	100.00%		A3LPJ5              	100.00%
Bootstrap support for Q4Q2Y3 as seed ortholog is 100%.
Bootstrap support for A3LPJ5 as seed ortholog is 100%.

Group of orthologs #830. Best score 118 bits
Score difference with first non-orthologous sequence - L.major:118 S.stipitis:118

Q4Q289              	100.00%		A3LVA8              	100.00%
Bootstrap support for Q4Q289 as seed ortholog is 100%.
Bootstrap support for A3LVA8 as seed ortholog is 100%.

Group of orthologs #831. Best score 118 bits
Score difference with first non-orthologous sequence - L.major:118 S.stipitis:118

Q4QBP6              	100.00%		A3GHM5              	100.00%
Bootstrap support for Q4QBP6 as seed ortholog is 100%.
Bootstrap support for A3GHM5 as seed ortholog is 100%.

Group of orthologs #832. Best score 118 bits
Score difference with first non-orthologous sequence - L.major:118 S.stipitis:118

Q4QAT5              	100.00%		A3LMZ4              	100.00%
Bootstrap support for Q4QAT5 as seed ortholog is 100%.
Bootstrap support for A3LMZ4 as seed ortholog is 100%.

Group of orthologs #833. Best score 118 bits
Score difference with first non-orthologous sequence - L.major:118 S.stipitis:74

Q4QEW1              	100.00%		A3LNF2              	100.00%
Bootstrap support for Q4QEW1 as seed ortholog is 100%.
Bootstrap support for A3LNF2 as seed ortholog is 68%.
Alternative seed ortholog is A3LVA3 (74 bits away from this cluster)

Group of orthologs #834. Best score 118 bits
Score difference with first non-orthologous sequence - L.major:118 S.stipitis:118

Q4QGW1              	100.00%		A3LWU4              	100.00%
Bootstrap support for Q4QGW1 as seed ortholog is 100%.
Bootstrap support for A3LWU4 as seed ortholog is 100%.

Group of orthologs #835. Best score 117 bits
Score difference with first non-orthologous sequence - L.major:117 S.stipitis:117

Q4Q2K6              	100.00%		A3LZ59              	100.00%
Bootstrap support for Q4Q2K6 as seed ortholog is 100%.
Bootstrap support for A3LZ59 as seed ortholog is 100%.

Group of orthologs #836. Best score 117 bits
Score difference with first non-orthologous sequence - L.major:117 S.stipitis:117

Q4QCN8              	100.00%		A3LU63              	100.00%
Bootstrap support for Q4QCN8 as seed ortholog is 100%.
Bootstrap support for A3LU63 as seed ortholog is 100%.

Group of orthologs #837. Best score 117 bits
Score difference with first non-orthologous sequence - L.major:117 S.stipitis:117

Q4QDN5              	100.00%		A3LU25              	100.00%
Bootstrap support for Q4QDN5 as seed ortholog is 100%.
Bootstrap support for A3LU25 as seed ortholog is 100%.

Group of orthologs #838. Best score 116 bits
Score difference with first non-orthologous sequence - L.major:116 S.stipitis:116

Q4Q277              	100.00%		A3LXD4              	100.00%
Q4QFI3              	100.00%		
Q4QJ78              	82.93%		
Bootstrap support for Q4Q277 as seed ortholog is 100%.
Bootstrap support for Q4QFI3 as seed ortholog is 100%.
Bootstrap support for A3LXD4 as seed ortholog is 100%.

Group of orthologs #839. Best score 116 bits
Score difference with first non-orthologous sequence - L.major:116 S.stipitis:116

E9ACN5              	100.00%		A3LS21              	100.00%
Bootstrap support for E9ACN5 as seed ortholog is 100%.
Bootstrap support for A3LS21 as seed ortholog is 100%.

Group of orthologs #840. Best score 116 bits
Score difference with first non-orthologous sequence - L.major:116 S.stipitis:116

Q4Q174              	100.00%		A3LMS0              	100.00%
Bootstrap support for Q4Q174 as seed ortholog is 100%.
Bootstrap support for A3LMS0 as seed ortholog is 100%.

Group of orthologs #841. Best score 116 bits
Score difference with first non-orthologous sequence - L.major:116 S.stipitis:116

Q4Q0K5              	100.00%		A3LPU9              	100.00%
Bootstrap support for Q4Q0K5 as seed ortholog is 100%.
Bootstrap support for A3LPU9 as seed ortholog is 100%.

Group of orthologs #842. Best score 116 bits
Score difference with first non-orthologous sequence - L.major:6 S.stipitis:116

Q4Q058              	100.00%		A3LUE2              	100.00%
Bootstrap support for Q4Q058 as seed ortholog is 66%.
Alternative seed ortholog is Q4QIH7 (6 bits away from this cluster)
Bootstrap support for A3LUE2 as seed ortholog is 100%.

Group of orthologs #843. Best score 116 bits
Score difference with first non-orthologous sequence - L.major:116 S.stipitis:116

Q4QG15              	100.00%		A3GFD9              	100.00%
Bootstrap support for Q4QG15 as seed ortholog is 100%.
Bootstrap support for A3GFD9 as seed ortholog is 100%.

Group of orthologs #844. Best score 115 bits
Score difference with first non-orthologous sequence - L.major:115 S.stipitis:115

E9AEK1              	100.00%		A3LS70              	100.00%
Bootstrap support for E9AEK1 as seed ortholog is 100%.
Bootstrap support for A3LS70 as seed ortholog is 100%.

Group of orthologs #845. Best score 115 bits
Score difference with first non-orthologous sequence - L.major:115 S.stipitis:115

Q4Q256              	100.00%		A3LQH4              	100.00%
Bootstrap support for Q4Q256 as seed ortholog is 100%.
Bootstrap support for A3LQH4 as seed ortholog is 100%.

Group of orthologs #846. Best score 115 bits
Score difference with first non-orthologous sequence - L.major:115 S.stipitis:115

Q4Q7Z6              	100.00%		A3GGS2              	100.00%
Bootstrap support for Q4Q7Z6 as seed ortholog is 100%.
Bootstrap support for A3GGS2 as seed ortholog is 100%.

Group of orthologs #847. Best score 115 bits
Score difference with first non-orthologous sequence - L.major:115 S.stipitis:115

Q4QAE7              	100.00%		A3LVD2              	100.00%
Bootstrap support for Q4QAE7 as seed ortholog is 100%.
Bootstrap support for A3LVD2 as seed ortholog is 100%.

Group of orthologs #848. Best score 114 bits
Score difference with first non-orthologous sequence - L.major:114 S.stipitis:114

Q4Q8Q0              	100.00%		A3M0E3              	100.00%
                    	       		A3LX34              	45.54%
Bootstrap support for Q4Q8Q0 as seed ortholog is 100%.
Bootstrap support for A3M0E3 as seed ortholog is 100%.

Group of orthologs #849. Best score 114 bits
Score difference with first non-orthologous sequence - L.major:114 S.stipitis:114

Q4QFN8              	100.00%		A3LWA9              	100.00%
                    	       		A3GHU6              	22.70%
Bootstrap support for Q4QFN8 as seed ortholog is 100%.
Bootstrap support for A3LWA9 as seed ortholog is 100%.

Group of orthologs #850. Best score 114 bits
Score difference with first non-orthologous sequence - L.major:114 S.stipitis:114

E9AF03              	100.00%		A3LU93              	100.00%
Bootstrap support for E9AF03 as seed ortholog is 100%.
Bootstrap support for A3LU93 as seed ortholog is 100%.

Group of orthologs #851. Best score 114 bits
Score difference with first non-orthologous sequence - L.major:114 S.stipitis:114

Q4Q786              	100.00%		A3LRK6              	100.00%
Bootstrap support for Q4Q786 as seed ortholog is 100%.
Bootstrap support for A3LRK6 as seed ortholog is 100%.

Group of orthologs #852. Best score 114 bits
Score difference with first non-orthologous sequence - L.major:114 S.stipitis:114

Q4Q9P9              	100.00%		A3LPW9              	100.00%
Bootstrap support for Q4Q9P9 as seed ortholog is 100%.
Bootstrap support for A3LPW9 as seed ortholog is 100%.

Group of orthologs #853. Best score 114 bits
Score difference with first non-orthologous sequence - L.major:114 S.stipitis:114

Q4Q8G4              	100.00%		A3LZ30              	100.00%
Bootstrap support for Q4Q8G4 as seed ortholog is 100%.
Bootstrap support for A3LZ30 as seed ortholog is 100%.

Group of orthologs #854. Best score 114 bits
Score difference with first non-orthologous sequence - L.major:114 S.stipitis:114

Q4QE62              	100.00%		A3LY29              	100.00%
Bootstrap support for Q4QE62 as seed ortholog is 100%.
Bootstrap support for A3LY29 as seed ortholog is 100%.

Group of orthologs #855. Best score 113 bits
Score difference with first non-orthologous sequence - L.major:113 S.stipitis:113

Q4QA94              	100.00%		A3LQL1              	100.00%
Bootstrap support for Q4QA94 as seed ortholog is 100%.
Bootstrap support for A3LQL1 as seed ortholog is 100%.

Group of orthologs #856. Best score 113 bits
Score difference with first non-orthologous sequence - L.major:40 S.stipitis:113

Q4QEM7              	100.00%		A3LNK3              	100.00%
Bootstrap support for Q4QEM7 as seed ortholog is 90%.
Bootstrap support for A3LNK3 as seed ortholog is 100%.

Group of orthologs #857. Best score 113 bits
Score difference with first non-orthologous sequence - L.major:113 S.stipitis:113

Q4Q6L1              	100.00%		A3LXS6              	100.00%
Bootstrap support for Q4Q6L1 as seed ortholog is 100%.
Bootstrap support for A3LXS6 as seed ortholog is 100%.

Group of orthologs #858. Best score 112 bits
Score difference with first non-orthologous sequence - L.major:112 S.stipitis:112

Q4Q4D4              	100.00%		A3LNX1              	100.00%
                    	       		A3LNX2              	75.02%
                    	       		A3LV79              	18.90%
                    	       		A3LQQ9              	18.05%
Bootstrap support for Q4Q4D4 as seed ortholog is 100%.
Bootstrap support for A3LNX1 as seed ortholog is 100%.

Group of orthologs #859. Best score 112 bits
Score difference with first non-orthologous sequence - L.major:112 S.stipitis:112

E9AC32              	100.00%		A3LP14              	100.00%
Bootstrap support for E9AC32 as seed ortholog is 100%.
Bootstrap support for A3LP14 as seed ortholog is 100%.

Group of orthologs #860. Best score 112 bits
Score difference with first non-orthologous sequence - L.major:112 S.stipitis:112

E9AFN7              	100.00%		A3LQW0              	100.00%
Bootstrap support for E9AFN7 as seed ortholog is 100%.
Bootstrap support for A3LQW0 as seed ortholog is 100%.

Group of orthologs #861. Best score 112 bits
Score difference with first non-orthologous sequence - L.major:112 S.stipitis:112

Q4Q1V6              	100.00%		A3LNN8              	100.00%
Bootstrap support for Q4Q1V6 as seed ortholog is 100%.
Bootstrap support for A3LNN8 as seed ortholog is 100%.

Group of orthologs #862. Best score 112 bits
Score difference with first non-orthologous sequence - L.major:112 S.stipitis:112

Q4QDF5              	100.00%		A3GGP5              	100.00%
Bootstrap support for Q4QDF5 as seed ortholog is 100%.
Bootstrap support for A3GGP5 as seed ortholog is 100%.

Group of orthologs #863. Best score 111 bits
Score difference with first non-orthologous sequence - L.major:111 S.stipitis:111

Q4QDZ8              	100.00%		A3LNJ5              	100.00%
Q4QD76              	100.00%		A3LWJ3              	100.00%
                    	       		A3GHR3              	36.85%
                    	       		A3LUQ6              	5.23%
Bootstrap support for Q4QDZ8 as seed ortholog is 100%.
Bootstrap support for Q4QD76 as seed ortholog is 100%.
Bootstrap support for A3LNJ5 as seed ortholog is 100%.
Bootstrap support for A3LWJ3 as seed ortholog is 100%.

Group of orthologs #864. Best score 111 bits
Score difference with first non-orthologous sequence - L.major:111 S.stipitis:111

E9ACF6              	100.00%		A3GF16              	100.00%
Bootstrap support for E9ACF6 as seed ortholog is 100%.
Bootstrap support for A3GF16 as seed ortholog is 100%.

Group of orthologs #865. Best score 111 bits
Score difference with first non-orthologous sequence - L.major:111 S.stipitis:111

Q4Q0V1              	100.00%		A3LVK6              	100.00%
Bootstrap support for Q4Q0V1 as seed ortholog is 100%.
Bootstrap support for A3LVK6 as seed ortholog is 100%.

Group of orthologs #866. Best score 111 bits
Score difference with first non-orthologous sequence - L.major:111 S.stipitis:111

Q4Q8W6              	100.00%		A3LPF8              	100.00%
Bootstrap support for Q4Q8W6 as seed ortholog is 100%.
Bootstrap support for A3LPF8 as seed ortholog is 100%.

Group of orthologs #867. Best score 111 bits
Score difference with first non-orthologous sequence - L.major:111 S.stipitis:111

Q4QIH2              	100.00%		A3LMS3              	100.00%
Bootstrap support for Q4QIH2 as seed ortholog is 100%.
Bootstrap support for A3LMS3 as seed ortholog is 100%.

Group of orthologs #868. Best score 111 bits
Score difference with first non-orthologous sequence - L.major:111 S.stipitis:5

Q4QA38              	100.00%		A3LW52              	100.00%
Bootstrap support for Q4QA38 as seed ortholog is 100%.
Bootstrap support for A3LW52 as seed ortholog is 55%.
Alternative seed ortholog is A3LU65 (5 bits away from this cluster)

Group of orthologs #869. Best score 111 bits
Score difference with first non-orthologous sequence - L.major:111 S.stipitis:111

Q4QJ20              	100.00%		A3LV58              	100.00%
Bootstrap support for Q4QJ20 as seed ortholog is 100%.
Bootstrap support for A3LV58 as seed ortholog is 100%.

Group of orthologs #870. Best score 110 bits
Score difference with first non-orthologous sequence - L.major:110 S.stipitis:110

E9AF27              	100.00%		A3LV31              	100.00%
Q4QC11              	85.44%		
Bootstrap support for E9AF27 as seed ortholog is 100%.
Bootstrap support for A3LV31 as seed ortholog is 100%.

Group of orthologs #871. Best score 110 bits
Score difference with first non-orthologous sequence - L.major:110 S.stipitis:110

Q4QJH5              	100.00%		A3LSM9              	100.00%
                    	       		A3LSM8              	10.81%
Bootstrap support for Q4QJH5 as seed ortholog is 100%.
Bootstrap support for A3LSM9 as seed ortholog is 100%.

Group of orthologs #872. Best score 109 bits
Score difference with first non-orthologous sequence - L.major:109 S.stipitis:18

Q4Q0L1              	100.00%		A3LRJ5              	100.00%
Q4Q0K9              	14.77%		
Q4Q0L0              	10.31%		
Bootstrap support for Q4Q0L1 as seed ortholog is 100%.
Bootstrap support for A3LRJ5 as seed ortholog is 61%.
Alternative seed ortholog is A3GG02 (18 bits away from this cluster)

Group of orthologs #873. Best score 109 bits
Score difference with first non-orthologous sequence - L.major:109 S.stipitis:109

E9ADG9              	100.00%		A3LRT4              	100.00%
Bootstrap support for E9ADG9 as seed ortholog is 100%.
Bootstrap support for A3LRT4 as seed ortholog is 100%.

Group of orthologs #874. Best score 109 bits
Score difference with first non-orthologous sequence - L.major:109 S.stipitis:109

Q4Q504              	100.00%		A3GHY7              	100.00%
Bootstrap support for Q4Q504 as seed ortholog is 100%.
Bootstrap support for A3GHY7 as seed ortholog is 100%.

Group of orthologs #875. Best score 109 bits
Score difference with first non-orthologous sequence - L.major:109 S.stipitis:109

Q4Q4Z4              	100.00%		A3LXC4              	100.00%
Bootstrap support for Q4Q4Z4 as seed ortholog is 100%.
Bootstrap support for A3LXC4 as seed ortholog is 100%.

Group of orthologs #876. Best score 109 bits
Score difference with first non-orthologous sequence - L.major:109 S.stipitis:109

Q4QJ44              	100.00%		A3LS95              	100.00%
Bootstrap support for Q4QJ44 as seed ortholog is 100%.
Bootstrap support for A3LS95 as seed ortholog is 100%.

Group of orthologs #877. Best score 109 bits
Score difference with first non-orthologous sequence - L.major:109 S.stipitis:109

Q4QHN2              	100.00%		A3LXH5              	100.00%
Bootstrap support for Q4QHN2 as seed ortholog is 100%.
Bootstrap support for A3LXH5 as seed ortholog is 100%.

Group of orthologs #878. Best score 108 bits
Score difference with first non-orthologous sequence - L.major:108 S.stipitis:108

Q4QFH4              	100.00%		A3GF36              	100.00%
                    	       		A3LVV8              	5.57%
                    	       		A3LPW1              	5.46%
Bootstrap support for Q4QFH4 as seed ortholog is 100%.
Bootstrap support for A3GF36 as seed ortholog is 100%.

Group of orthologs #879. Best score 108 bits
Score difference with first non-orthologous sequence - L.major:18 S.stipitis:108

Q4Q989              	100.00%		A3LNU6              	100.00%
Bootstrap support for Q4Q989 as seed ortholog is 77%.
Bootstrap support for A3LNU6 as seed ortholog is 100%.

Group of orthologs #880. Best score 108 bits
Score difference with first non-orthologous sequence - L.major:108 S.stipitis:108

Q4QAH7              	100.00%		A3LQD8              	100.00%
Bootstrap support for Q4QAH7 as seed ortholog is 100%.
Bootstrap support for A3LQD8 as seed ortholog is 100%.

Group of orthologs #881. Best score 108 bits
Score difference with first non-orthologous sequence - L.major:14 S.stipitis:108

Q4QDW4              	100.00%		A3GI06              	100.00%
Bootstrap support for Q4QDW4 as seed ortholog is 48%.
Alternative seed ortholog is Q4QDW3 (14 bits away from this cluster)
Bootstrap support for A3GI06 as seed ortholog is 100%.

Group of orthologs #882. Best score 108 bits
Score difference with first non-orthologous sequence - L.major:108 S.stipitis:108

Q4QCZ8              	100.00%		A3LTS4              	100.00%
Bootstrap support for Q4QCZ8 as seed ortholog is 100%.
Bootstrap support for A3LTS4 as seed ortholog is 100%.

Group of orthologs #883. Best score 107 bits
Score difference with first non-orthologous sequence - L.major:107 S.stipitis:57

Q4Q596              	100.00%		A3M0N6              	100.00%
Q4Q597              	81.66%		A3GFH2              	60.92%
Q4Q512              	12.43%		
Q4QIE0              	10.95%		
Bootstrap support for Q4Q596 as seed ortholog is 100%.
Bootstrap support for A3M0N6 as seed ortholog is 95%.

Group of orthologs #884. Best score 107 bits
Score difference with first non-orthologous sequence - L.major:107 S.stipitis:48

E9AF68              	100.00%		A3GGU8              	100.00%
Bootstrap support for E9AF68 as seed ortholog is 100%.
Bootstrap support for A3GGU8 as seed ortholog is 89%.

Group of orthologs #885. Best score 107 bits
Score difference with first non-orthologous sequence - L.major:107 S.stipitis:107

Q4QBZ3              	100.00%		A3GFZ9              	100.00%
Bootstrap support for Q4QBZ3 as seed ortholog is 100%.
Bootstrap support for A3GFZ9 as seed ortholog is 100%.

Group of orthologs #886. Best score 107 bits
Score difference with first non-orthologous sequence - L.major:107 S.stipitis:107

Q4QBJ4              	100.00%		A3LQL5              	100.00%
Bootstrap support for Q4QBJ4 as seed ortholog is 100%.
Bootstrap support for A3LQL5 as seed ortholog is 100%.

Group of orthologs #887. Best score 106 bits
Score difference with first non-orthologous sequence - L.major:106 S.stipitis:106

E9AFF6              	100.00%		A3GI95              	100.00%
Bootstrap support for E9AFF6 as seed ortholog is 100%.
Bootstrap support for A3GI95 as seed ortholog is 100%.

Group of orthologs #888. Best score 106 bits
Score difference with first non-orthologous sequence - L.major:106 S.stipitis:106

Q4Q0Q6              	100.00%		A3LPY3              	100.00%
Bootstrap support for Q4Q0Q6 as seed ortholog is 100%.
Bootstrap support for A3LPY3 as seed ortholog is 100%.

Group of orthologs #889. Best score 106 bits
Score difference with first non-orthologous sequence - L.major:106 S.stipitis:106

Q4Q130              	100.00%		A3LX45              	100.00%
Bootstrap support for Q4Q130 as seed ortholog is 100%.
Bootstrap support for A3LX45 as seed ortholog is 100%.

Group of orthologs #890. Best score 106 bits
Score difference with first non-orthologous sequence - L.major:106 S.stipitis:106

Q4QE21              	100.00%		A3LPE0              	100.00%
Bootstrap support for Q4QE21 as seed ortholog is 100%.
Bootstrap support for A3LPE0 as seed ortholog is 100%.

Group of orthologs #891. Best score 106 bits
Score difference with first non-orthologous sequence - L.major:59 S.stipitis:106

Q4QBI9              	100.00%		A3LTY6              	100.00%
Bootstrap support for Q4QBI9 as seed ortholog is 90%.
Bootstrap support for A3LTY6 as seed ortholog is 100%.

Group of orthologs #892. Best score 106 bits
Score difference with first non-orthologous sequence - L.major:52 S.stipitis:106

Q4QHV8              	100.00%		A3LQU5              	100.00%
Bootstrap support for Q4QHV8 as seed ortholog is 95%.
Bootstrap support for A3LQU5 as seed ortholog is 100%.

Group of orthologs #893. Best score 105 bits
Score difference with first non-orthologous sequence - L.major:105 S.stipitis:105

Q4Q150              	100.00%		A3GHN3              	100.00%
Bootstrap support for Q4Q150 as seed ortholog is 100%.
Bootstrap support for A3GHN3 as seed ortholog is 100%.

Group of orthologs #894. Best score 105 bits
Score difference with first non-orthologous sequence - L.major:105 S.stipitis:105

Q4Q1D2              	100.00%		A3LNE4              	100.00%
Bootstrap support for Q4Q1D2 as seed ortholog is 100%.
Bootstrap support for A3LNE4 as seed ortholog is 100%.

Group of orthologs #895. Best score 105 bits
Score difference with first non-orthologous sequence - L.major:105 S.stipitis:105

Q4QA07              	100.00%		A3LNT2              	100.00%
Bootstrap support for Q4QA07 as seed ortholog is 100%.
Bootstrap support for A3LNT2 as seed ortholog is 100%.

Group of orthologs #896. Best score 105 bits
Score difference with first non-orthologous sequence - L.major:105 S.stipitis:105

Q4QJA1              	100.00%		A3LZT5              	100.00%
Bootstrap support for Q4QJA1 as seed ortholog is 100%.
Bootstrap support for A3LZT5 as seed ortholog is 100%.

Group of orthologs #897. Best score 104 bits
Score difference with first non-orthologous sequence - L.major:104 S.stipitis:104

E9AEH2              	100.00%		A3LNK5              	100.00%
E9AFY3              	82.28%		
Bootstrap support for E9AEH2 as seed ortholog is 100%.
Bootstrap support for A3LNK5 as seed ortholog is 100%.

Group of orthologs #898. Best score 104 bits
Score difference with first non-orthologous sequence - L.major:104 S.stipitis:104

E9ADU9              	100.00%		A3GFI8              	100.00%
Bootstrap support for E9ADU9 as seed ortholog is 100%.
Bootstrap support for A3GFI8 as seed ortholog is 100%.

Group of orthologs #899. Best score 104 bits
Score difference with first non-orthologous sequence - L.major:47 S.stipitis:42

Q4Q1B7              	100.00%		A3GGM6              	100.00%
Bootstrap support for Q4Q1B7 as seed ortholog is 96%.
Bootstrap support for A3GGM6 as seed ortholog is 94%.

Group of orthologs #900. Best score 104 bits
Score difference with first non-orthologous sequence - L.major:104 S.stipitis:11

E9ADM7              	100.00%		A3LTN1              	100.00%
Bootstrap support for E9ADM7 as seed ortholog is 100%.
Bootstrap support for A3LTN1 as seed ortholog is 59%.
Alternative seed ortholog is A3GFQ3 (11 bits away from this cluster)

Group of orthologs #901. Best score 104 bits
Score difference with first non-orthologous sequence - L.major:33 S.stipitis:104

Q4Q7N4              	100.00%		A3M0H3              	100.00%
Bootstrap support for Q4Q7N4 as seed ortholog is 89%.
Bootstrap support for A3M0H3 as seed ortholog is 100%.

Group of orthologs #902. Best score 104 bits
Score difference with first non-orthologous sequence - L.major:104 S.stipitis:104

Q4Q956              	100.00%		A3LZT7              	100.00%
Bootstrap support for Q4Q956 as seed ortholog is 100%.
Bootstrap support for A3LZT7 as seed ortholog is 100%.

Group of orthologs #903. Best score 103 bits
Score difference with first non-orthologous sequence - L.major:103 S.stipitis:103

Q4Q974              	100.00%		A3LRX7              	100.00%
                    	       		A3GF42              	26.09%
Bootstrap support for Q4Q974 as seed ortholog is 100%.
Bootstrap support for A3LRX7 as seed ortholog is 100%.

Group of orthologs #904. Best score 103 bits
Score difference with first non-orthologous sequence - L.major:103 S.stipitis:103

Q4Q209              	100.00%		A3GEZ9              	100.00%
Bootstrap support for Q4Q209 as seed ortholog is 100%.
Bootstrap support for A3GEZ9 as seed ortholog is 100%.

Group of orthologs #905. Best score 103 bits
Score difference with first non-orthologous sequence - L.major:103 S.stipitis:37

Q4Q9N3              	100.00%		A3LSR9              	100.00%
Bootstrap support for Q4Q9N3 as seed ortholog is 100%.
Bootstrap support for A3LSR9 as seed ortholog is 79%.

Group of orthologs #906. Best score 103 bits
Score difference with first non-orthologous sequence - L.major:51 S.stipitis:103

Q9BJ46              	100.00%		A3LXW8              	100.00%
Bootstrap support for Q9BJ46 as seed ortholog is 97%.
Bootstrap support for A3LXW8 as seed ortholog is 100%.

Group of orthologs #907. Best score 103 bits
Score difference with first non-orthologous sequence - L.major:103 S.stipitis:103

Q4QJI0              	100.00%		A3LYR2              	100.00%
Bootstrap support for Q4QJI0 as seed ortholog is 100%.
Bootstrap support for A3LYR2 as seed ortholog is 100%.

Group of orthologs #908. Best score 102 bits
Score difference with first non-orthologous sequence - L.major:48 S.stipitis:102

Q4QFQ9              	100.00%		A3LNA0              	100.00%
Q4QFR6              	100.00%		A3GI09              	100.00%
Q4QFR5              	61.97%		
Q4QFR4              	23.95%		
Q4QFR0              	20.12%		
Q4QFR2              	17.77%		
Q4QFR1              	16.02%		
Q4QFR7              	14.08%		
Q4QFS0              	13.16%		
Q4QFR8              	11.33%		
Bootstrap support for Q4QFQ9 as seed ortholog is 83%.
Bootstrap support for Q4QFR6 as seed ortholog is 62%.
Alternative seed ortholog is Q4Q5G6 (48 bits away from this cluster)
Bootstrap support for A3LNA0 as seed ortholog is 100%.
Bootstrap support for A3GI09 as seed ortholog is 100%.

Group of orthologs #909. Best score 102 bits
Score difference with first non-orthologous sequence - L.major:102 S.stipitis:102

Q4QEN1              	100.00%		A3LY54              	100.00%
                    	       		A3GGC6              	17.61%
                    	       		A3LT70              	16.65%
                    	       		A3LWM3              	16.56%
Bootstrap support for Q4QEN1 as seed ortholog is 100%.
Bootstrap support for A3LY54 as seed ortholog is 100%.

Group of orthologs #910. Best score 102 bits
Score difference with first non-orthologous sequence - L.major:102 S.stipitis:102

Q9U111              	100.00%		A3GHD3              	100.00%
O97212              	98.66%		
Bootstrap support for Q9U111 as seed ortholog is 100%.
Bootstrap support for A3GHD3 as seed ortholog is 100%.

Group of orthologs #911. Best score 102 bits
Score difference with first non-orthologous sequence - L.major:102 S.stipitis:102

E9AEU8              	100.00%		A3GGH5              	100.00%
Bootstrap support for E9AEU8 as seed ortholog is 100%.
Bootstrap support for A3GGH5 as seed ortholog is 100%.

Group of orthologs #912. Best score 102 bits
Score difference with first non-orthologous sequence - L.major:102 S.stipitis:102

Q4QA41              	100.00%		A3LQK8              	100.00%
Bootstrap support for Q4QA41 as seed ortholog is 100%.
Bootstrap support for A3LQK8 as seed ortholog is 100%.

Group of orthologs #913. Best score 102 bits
Score difference with first non-orthologous sequence - L.major:102 S.stipitis:102

Q4Q2E3              	100.00%		A3M070              	100.00%
Bootstrap support for Q4Q2E3 as seed ortholog is 100%.
Bootstrap support for A3M070 as seed ortholog is 100%.

Group of orthologs #914. Best score 102 bits
Score difference with first non-orthologous sequence - L.major:102 S.stipitis:102

Q4QFV8              	100.00%		A3LQE5              	100.00%
Bootstrap support for Q4QFV8 as seed ortholog is 100%.
Bootstrap support for A3LQE5 as seed ortholog is 100%.

Group of orthologs #915. Best score 102 bits
Score difference with first non-orthologous sequence - L.major:102 S.stipitis:102

Q95ZB8              	100.00%		A3LSS0              	100.00%
Bootstrap support for Q95ZB8 as seed ortholog is 100%.
Bootstrap support for A3LSS0 as seed ortholog is 100%.

Group of orthologs #916. Best score 102 bits
Score difference with first non-orthologous sequence - L.major:102 S.stipitis:102

Q4QJ17              	100.00%		A3LZZ4              	100.00%
Bootstrap support for Q4QJ17 as seed ortholog is 100%.
Bootstrap support for A3LZZ4 as seed ortholog is 100%.

Group of orthologs #917. Best score 101 bits
Score difference with first non-orthologous sequence - L.major:30 S.stipitis:29

E9AFF7              	100.00%		A3LU34              	100.00%
                    	       		A3LSC5              	5.43%
Bootstrap support for E9AFF7 as seed ortholog is 77%.
Bootstrap support for A3LU34 as seed ortholog is 76%.

Group of orthologs #918. Best score 101 bits
Score difference with first non-orthologous sequence - L.major:101 S.stipitis:101

Q4Q0F8              	100.00%		A3LR91              	100.00%
Bootstrap support for Q4Q0F8 as seed ortholog is 100%.
Bootstrap support for A3LR91 as seed ortholog is 100%.

Group of orthologs #919. Best score 101 bits
Score difference with first non-orthologous sequence - L.major:101 S.stipitis:101

E9AC85              	100.00%		A3LWK3              	100.00%
Bootstrap support for E9AC85 as seed ortholog is 100%.
Bootstrap support for A3LWK3 as seed ortholog is 100%.

Group of orthologs #920. Best score 101 bits
Score difference with first non-orthologous sequence - L.major:101 S.stipitis:101

Q4Q5M0              	100.00%		A3LMS7              	100.00%
Bootstrap support for Q4Q5M0 as seed ortholog is 100%.
Bootstrap support for A3LMS7 as seed ortholog is 100%.

Group of orthologs #921. Best score 101 bits
Score difference with first non-orthologous sequence - L.major:101 S.stipitis:101

Q4QIV2              	100.00%		A3LXM0              	100.00%
Bootstrap support for Q4QIV2 as seed ortholog is 100%.
Bootstrap support for A3LXM0 as seed ortholog is 100%.

Group of orthologs #922. Best score 101 bits
Score difference with first non-orthologous sequence - L.major:101 S.stipitis:101

Q86MW5              	100.00%		A3LZK1              	100.00%
Bootstrap support for Q86MW5 as seed ortholog is 100%.
Bootstrap support for A3LZK1 as seed ortholog is 100%.

Group of orthologs #923. Best score 100 bits
Score difference with first non-orthologous sequence - L.major:100 S.stipitis:100

Q4QII4              	100.00%		A3LXA6              	100.00%
                    	       		A3LXA7              	68.73%
Bootstrap support for Q4QII4 as seed ortholog is 100%.
Bootstrap support for A3LXA6 as seed ortholog is 100%.

Group of orthologs #924. Best score 100 bits
Score difference with first non-orthologous sequence - L.major:100 S.stipitis:100

Q4Q281              	100.00%		A3GFN2              	100.00%
Bootstrap support for Q4Q281 as seed ortholog is 100%.
Bootstrap support for A3GFN2 as seed ortholog is 100%.

Group of orthologs #925. Best score 100 bits
Score difference with first non-orthologous sequence - L.major:100 S.stipitis:100

Q4Q0A8              	100.00%		A3LND3              	100.00%
Bootstrap support for Q4Q0A8 as seed ortholog is 100%.
Bootstrap support for A3LND3 as seed ortholog is 100%.

Group of orthologs #926. Best score 100 bits
Score difference with first non-orthologous sequence - L.major:100 S.stipitis:100

Q4QBV1              	100.00%		A3GG95              	100.00%
Bootstrap support for Q4QBV1 as seed ortholog is 100%.
Bootstrap support for A3GG95 as seed ortholog is 100%.

Group of orthologs #927. Best score 100 bits
Score difference with first non-orthologous sequence - L.major:100 S.stipitis:100

E9AE97              	100.00%		A3LZ66              	100.00%
Bootstrap support for E9AE97 as seed ortholog is 100%.
Bootstrap support for A3LZ66 as seed ortholog is 100%.

Group of orthologs #928. Best score 99 bits
Score difference with first non-orthologous sequence - L.major:18 S.stipitis:99

Q4Q5R2              	100.00%		A3LN47              	100.00%
Q4QA70              	8.25%		
Bootstrap support for Q4Q5R2 as seed ortholog is 85%.
Bootstrap support for A3LN47 as seed ortholog is 100%.

Group of orthologs #929. Best score 99 bits
Score difference with first non-orthologous sequence - L.major:52 S.stipitis:30

Q4QAC7              	100.00%		A3LSN6              	100.00%
                    	       		A3LZU7              	9.55%
Bootstrap support for Q4QAC7 as seed ortholog is 94%.
Bootstrap support for A3LSN6 as seed ortholog is 78%.

Group of orthologs #930. Best score 99 bits
Score difference with first non-orthologous sequence - L.major:99 S.stipitis:99

Q4QFJ7              	100.00%		A3GGK9              	100.00%
Bootstrap support for Q4QFJ7 as seed ortholog is 100%.
Bootstrap support for A3GGK9 as seed ortholog is 100%.

Group of orthologs #931. Best score 99 bits
Score difference with first non-orthologous sequence - L.major:99 S.stipitis:99

Q4QAI0              	100.00%		A3LXS7              	100.00%
Bootstrap support for Q4QAI0 as seed ortholog is 100%.
Bootstrap support for A3LXS7 as seed ortholog is 100%.

Group of orthologs #932. Best score 99 bits
Score difference with first non-orthologous sequence - L.major:99 S.stipitis:99

Q4QB10              	100.00%		A3M027              	100.00%
Bootstrap support for Q4QB10 as seed ortholog is 100%.
Bootstrap support for A3M027 as seed ortholog is 100%.

Group of orthologs #933. Best score 99 bits
Score difference with first non-orthologous sequence - L.major:99 S.stipitis:99

Q4QHF4              	100.00%		A3LZH1              	100.00%
Bootstrap support for Q4QHF4 as seed ortholog is 100%.
Bootstrap support for A3LZH1 as seed ortholog is 100%.

Group of orthologs #934. Best score 98 bits
Score difference with first non-orthologous sequence - L.major:98 S.stipitis:98

Q4Q8P9              	100.00%		A3LXE6              	100.00%
Q9U8C0              	100.00%		A3LZZ1              	100.00%
Q4QHP1              	67.74%		
Bootstrap support for Q4Q8P9 as seed ortholog is 100%.
Bootstrap support for Q9U8C0 as seed ortholog is 100%.
Bootstrap support for A3LXE6 as seed ortholog is 100%.
Bootstrap support for A3LZZ1 as seed ortholog is 100%.

Group of orthologs #935. Best score 98 bits
Score difference with first non-orthologous sequence - L.major:98 S.stipitis:98

Q4Q6X0              	100.00%		A3LRP1              	100.00%
Q4Q8L6              	97.10%		
Bootstrap support for Q4Q6X0 as seed ortholog is 100%.
Bootstrap support for A3LRP1 as seed ortholog is 100%.

Group of orthologs #936. Best score 98 bits
Score difference with first non-orthologous sequence - L.major:98 S.stipitis:98

Q4Q140              	100.00%		A3LZ02              	100.00%
                    	       		A3GFX8              	84.00%
Bootstrap support for Q4Q140 as seed ortholog is 100%.
Bootstrap support for A3LZ02 as seed ortholog is 100%.

Group of orthologs #937. Best score 98 bits
Score difference with first non-orthologous sequence - L.major:98 S.stipitis:98

Q4Q5E8              	100.00%		A3GGN7              	100.00%
Bootstrap support for Q4Q5E8 as seed ortholog is 100%.
Bootstrap support for A3GGN7 as seed ortholog is 100%.

Group of orthologs #938. Best score 98 bits
Score difference with first non-orthologous sequence - L.major:98 S.stipitis:98

Q4QGS1              	100.00%		A3LU64              	100.00%
Bootstrap support for Q4QGS1 as seed ortholog is 100%.
Bootstrap support for A3LU64 as seed ortholog is 100%.

Group of orthologs #939. Best score 97 bits
Score difference with first non-orthologous sequence - L.major:97 S.stipitis:97

Q4QJF4              	100.00%		A3LPQ4              	100.00%
                    	       		A3LQJ6              	38.30%
                    	       		A3LZP0              	37.94%
                    	       		A3LUM2              	28.45%
                    	       		A3GGF8              	19.93%
Bootstrap support for Q4QJF4 as seed ortholog is 100%.
Bootstrap support for A3LPQ4 as seed ortholog is 100%.

Group of orthologs #940. Best score 97 bits
Score difference with first non-orthologous sequence - L.major:33 S.stipitis:97

Q4Q6R5              	100.00%		A3LSH5              	100.00%
Q4Q6R6              	100.00%		A3GHH7              	43.52%
Bootstrap support for Q4Q6R5 as seed ortholog is 74%.
Alternative seed ortholog is Q4QF62 (33 bits away from this cluster)
Bootstrap support for Q4Q6R6 as seed ortholog is 76%.
Bootstrap support for A3LSH5 as seed ortholog is 100%.

Group of orthologs #941. Best score 97 bits
Score difference with first non-orthologous sequence - L.major:97 S.stipitis:97

E9AF00              	100.00%		A3GH04              	100.00%
Bootstrap support for E9AF00 as seed ortholog is 100%.
Bootstrap support for A3GH04 as seed ortholog is 100%.

Group of orthologs #942. Best score 97 bits
Score difference with first non-orthologous sequence - L.major:97 S.stipitis:97

E9AEQ1              	100.00%		A3LRG2              	100.00%
Bootstrap support for E9AEQ1 as seed ortholog is 100%.
Bootstrap support for A3LRG2 as seed ortholog is 100%.

Group of orthologs #943. Best score 97 bits
Score difference with first non-orthologous sequence - L.major:97 S.stipitis:97

Q4Q2X8              	100.00%		A3LQB4              	100.00%
Bootstrap support for Q4Q2X8 as seed ortholog is 100%.
Bootstrap support for A3LQB4 as seed ortholog is 100%.

Group of orthologs #944. Best score 97 bits
Score difference with first non-orthologous sequence - L.major:97 S.stipitis:97

Q4Q3M7              	100.00%		A3LY60              	100.00%
Bootstrap support for Q4Q3M7 as seed ortholog is 100%.
Bootstrap support for A3LY60 as seed ortholog is 100%.

Group of orthologs #945. Best score 97 bits
Score difference with first non-orthologous sequence - L.major:97 S.stipitis:97

Q4QIY6              	100.00%		A3M0I6              	100.00%
Bootstrap support for Q4QIY6 as seed ortholog is 100%.
Bootstrap support for A3M0I6 as seed ortholog is 100%.

Group of orthologs #946. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:96 S.stipitis:96

Q4Q1H9              	100.00%		A3LXS8              	100.00%
                    	       		A3LP77              	21.06%
Bootstrap support for Q4Q1H9 as seed ortholog is 100%.
Bootstrap support for A3LXS8 as seed ortholog is 100%.

Group of orthologs #947. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:96 S.stipitis:96

Q4QHG4              	100.00%		A3LYI9              	100.00%
                    	       		A3LU81              	55.21%
Bootstrap support for Q4QHG4 as seed ortholog is 100%.
Bootstrap support for A3LYI9 as seed ortholog is 100%.

Group of orthologs #948. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:96 S.stipitis:96

E9AFM7              	100.00%		A3GIA5              	100.00%
Bootstrap support for E9AFM7 as seed ortholog is 100%.
Bootstrap support for A3GIA5 as seed ortholog is 100%.

Group of orthologs #949. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:96 S.stipitis:96

Q4Q0R8              	100.00%		A3GH43              	100.00%
Bootstrap support for Q4Q0R8 as seed ortholog is 100%.
Bootstrap support for A3GH43 as seed ortholog is 100%.

Group of orthologs #950. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:96 S.stipitis:96

E9AFU9              	100.00%		A3GI53              	100.00%
Bootstrap support for E9AFU9 as seed ortholog is 100%.
Bootstrap support for A3GI53 as seed ortholog is 100%.

Group of orthologs #951. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:15 S.stipitis:96

E9AC00              	100.00%		A3LWS1              	100.00%
Bootstrap support for E9AC00 as seed ortholog is 77%.
Bootstrap support for A3LWS1 as seed ortholog is 100%.

Group of orthologs #952. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:96 S.stipitis:96

Q4Q2L8              	100.00%		A3LR86              	100.00%
Bootstrap support for Q4Q2L8 as seed ortholog is 100%.
Bootstrap support for A3LR86 as seed ortholog is 100%.

Group of orthologs #953. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:96 S.stipitis:96

Q4Q231              	100.00%		A3LU67              	100.00%
Bootstrap support for Q4Q231 as seed ortholog is 100%.
Bootstrap support for A3LU67 as seed ortholog is 100%.

Group of orthologs #954. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:96 S.stipitis:96

Q4Q8Y8              	100.00%		A3LXC9              	100.00%
Bootstrap support for Q4Q8Y8 as seed ortholog is 100%.
Bootstrap support for A3LXC9 as seed ortholog is 100%.

Group of orthologs #955. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:96 S.stipitis:96

Q4QF06              	100.00%		A3LW99              	100.00%
Bootstrap support for Q4QF06 as seed ortholog is 100%.
Bootstrap support for A3LW99 as seed ortholog is 100%.

Group of orthologs #956. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:53 S.stipitis:96

Q4QEB2              	100.00%		A3LZZ5              	100.00%
Bootstrap support for Q4QEB2 as seed ortholog is 98%.
Bootstrap support for A3LZZ5 as seed ortholog is 100%.

Group of orthologs #957. Best score 95 bits
Score difference with first non-orthologous sequence - L.major:95 S.stipitis:95

E9AC20              	100.00%		A3LW30              	100.00%
Bootstrap support for E9AC20 as seed ortholog is 100%.
Bootstrap support for A3LW30 as seed ortholog is 100%.

Group of orthologs #958. Best score 95 bits
Score difference with first non-orthologous sequence - L.major:95 S.stipitis:95

Q4Q9L4              	100.00%		A3GG45              	100.00%
Bootstrap support for Q4Q9L4 as seed ortholog is 100%.
Bootstrap support for A3GG45 as seed ortholog is 100%.

Group of orthologs #959. Best score 95 bits
Score difference with first non-orthologous sequence - L.major:28 S.stipitis:95

Q4Q5F9              	100.00%		A3LU38              	100.00%
Bootstrap support for Q4Q5F9 as seed ortholog is 44%.
Alternative seed ortholog is Q4Q1A4 (28 bits away from this cluster)
Bootstrap support for A3LU38 as seed ortholog is 100%.

Group of orthologs #960. Best score 94 bits
Score difference with first non-orthologous sequence - L.major:94 S.stipitis:94

E9AF44              	100.00%		A3M0K2              	100.00%
Bootstrap support for E9AF44 as seed ortholog is 100%.
Bootstrap support for A3M0K2 as seed ortholog is 100%.

Group of orthologs #961. Best score 94 bits
Score difference with first non-orthologous sequence - L.major:94 S.stipitis:94

Q4Q1N6              	100.00%		A3LY48              	100.00%
Bootstrap support for Q4Q1N6 as seed ortholog is 100%.
Bootstrap support for A3LY48 as seed ortholog is 100%.

Group of orthologs #962. Best score 94 bits
Score difference with first non-orthologous sequence - L.major:1 S.stipitis:94

Q4QD60              	100.00%		A3GIA6              	100.00%
Bootstrap support for Q4QD60 as seed ortholog is 48%.
Alternative seed ortholog is E9ADE1 (1 bits away from this cluster)
Bootstrap support for A3GIA6 as seed ortholog is 100%.

Group of orthologs #963. Best score 94 bits
Score difference with first non-orthologous sequence - L.major:94 S.stipitis:94

Q4Q488              	100.00%		A3LXF7              	100.00%
Bootstrap support for Q4Q488 as seed ortholog is 100%.
Bootstrap support for A3LXF7 as seed ortholog is 100%.

Group of orthologs #964. Best score 94 bits
Score difference with first non-orthologous sequence - L.major:94 S.stipitis:94

Q4QDM7              	100.00%		A3LNQ9              	100.00%
Bootstrap support for Q4QDM7 as seed ortholog is 100%.
Bootstrap support for A3LNQ9 as seed ortholog is 100%.

Group of orthologs #965. Best score 93 bits
Score difference with first non-orthologous sequence - L.major:93 S.stipitis:39

E9ACY6              	100.00%		A3LR60              	100.00%
                    	       		A3LRT5              	61.02%
                    	       		A3LZV9              	45.55%
Bootstrap support for E9ACY6 as seed ortholog is 100%.
Bootstrap support for A3LR60 as seed ortholog is 80%.

Group of orthologs #966. Best score 93 bits
Score difference with first non-orthologous sequence - L.major:93 S.stipitis:37

Q4Q7Q2              	100.00%		A3GG27              	100.00%
Bootstrap support for Q4Q7Q2 as seed ortholog is 100%.
Bootstrap support for A3GG27 as seed ortholog is 99%.

Group of orthologs #967. Best score 93 bits
Score difference with first non-orthologous sequence - L.major:93 S.stipitis:93

Q4QBC1              	100.00%		A3LN04              	100.00%
Bootstrap support for Q4QBC1 as seed ortholog is 100%.
Bootstrap support for A3LN04 as seed ortholog is 100%.

Group of orthologs #968. Best score 93 bits
Score difference with first non-orthologous sequence - L.major:93 S.stipitis:93

Q4Q0I3              	100.00%		A3M090              	100.00%
Bootstrap support for Q4Q0I3 as seed ortholog is 100%.
Bootstrap support for A3M090 as seed ortholog is 100%.

Group of orthologs #969. Best score 92 bits
Score difference with first non-orthologous sequence - L.major:92 S.stipitis:92

Q4Q2L1              	100.00%		A3LS01              	100.00%
                    	       		A3LSP0              	61.64%
Bootstrap support for Q4Q2L1 as seed ortholog is 100%.
Bootstrap support for A3LS01 as seed ortholog is 100%.

Group of orthologs #970. Best score 92 bits
Score difference with first non-orthologous sequence - L.major:92 S.stipitis:92

E9AC36              	100.00%		A3LY76              	100.00%
Bootstrap support for E9AC36 as seed ortholog is 100%.
Bootstrap support for A3LY76 as seed ortholog is 100%.

Group of orthologs #971. Best score 92 bits
Score difference with first non-orthologous sequence - L.major:92 S.stipitis:92

Q4Q9K0              	100.00%		A3GG44              	100.00%
Bootstrap support for Q4Q9K0 as seed ortholog is 100%.
Bootstrap support for A3GG44 as seed ortholog is 100%.

Group of orthologs #972. Best score 92 bits
Score difference with first non-orthologous sequence - L.major:92 S.stipitis:92

Q4Q869              	100.00%		A3LSN8              	100.00%
Bootstrap support for Q4Q869 as seed ortholog is 100%.
Bootstrap support for A3LSN8 as seed ortholog is 100%.

Group of orthologs #973. Best score 92 bits
Score difference with first non-orthologous sequence - L.major:92 S.stipitis:92

Q4Q7P4              	100.00%		A3LX88              	100.00%
Bootstrap support for Q4Q7P4 as seed ortholog is 100%.
Bootstrap support for A3LX88 as seed ortholog is 100%.

Group of orthologs #974. Best score 92 bits
Score difference with first non-orthologous sequence - L.major:23 S.stipitis:16

Q4QFH2              	100.00%		A3LU99              	100.00%
Bootstrap support for Q4QFH2 as seed ortholog is 76%.
Bootstrap support for A3LU99 as seed ortholog is 66%.
Alternative seed ortholog is A3LVX1 (16 bits away from this cluster)

Group of orthologs #975. Best score 91 bits
Score difference with first non-orthologous sequence - L.major:91 S.stipitis:91

Q4Q0L5              	100.00%		A3LNM6              	100.00%
Bootstrap support for Q4Q0L5 as seed ortholog is 100%.
Bootstrap support for A3LNM6 as seed ortholog is 100%.

Group of orthologs #976. Best score 91 bits
Score difference with first non-orthologous sequence - L.major:91 S.stipitis:91

E9AF95              	100.00%		A3LTG0              	100.00%
Bootstrap support for E9AF95 as seed ortholog is 100%.
Bootstrap support for A3LTG0 as seed ortholog is 100%.

Group of orthologs #977. Best score 91 bits
Score difference with first non-orthologous sequence - L.major:91 S.stipitis:91

E9AFQ2              	100.00%		A3LV45              	100.00%
Bootstrap support for E9AFQ2 as seed ortholog is 100%.
Bootstrap support for A3LV45 as seed ortholog is 100%.

Group of orthologs #978. Best score 91 bits
Score difference with first non-orthologous sequence - L.major:91 S.stipitis:91

Q4Q5G2              	100.00%		A3LU02              	100.00%
Bootstrap support for Q4Q5G2 as seed ortholog is 100%.
Bootstrap support for A3LU02 as seed ortholog is 100%.

Group of orthologs #979. Best score 91 bits
Score difference with first non-orthologous sequence - L.major:91 S.stipitis:91

Q4Q5S9              	100.00%		A3LX44              	100.00%
Bootstrap support for Q4Q5S9 as seed ortholog is 100%.
Bootstrap support for A3LX44 as seed ortholog is 100%.

Group of orthologs #980. Best score 91 bits
Score difference with first non-orthologous sequence - L.major:91 S.stipitis:91

Q4QDZ6              	100.00%		A3LR02              	100.00%
Bootstrap support for Q4QDZ6 as seed ortholog is 100%.
Bootstrap support for A3LR02 as seed ortholog is 100%.

Group of orthologs #981. Best score 90 bits
Score difference with first non-orthologous sequence - L.major:90 S.stipitis:90

E9AEE8              	100.00%		A3LZU1              	100.00%
Q4Q2R6              	100.00%		
Bootstrap support for E9AEE8 as seed ortholog is 100%.
Bootstrap support for Q4Q2R6 as seed ortholog is 100%.
Bootstrap support for A3LZU1 as seed ortholog is 100%.

Group of orthologs #982. Best score 90 bits
Score difference with first non-orthologous sequence - L.major:22 S.stipitis:90

Q4QG90              	100.00%		A3LSW5              	100.00%
                    	       		A3LND4              	14.31%
Bootstrap support for Q4QG90 as seed ortholog is 65%.
Alternative seed ortholog is E9AE68 (22 bits away from this cluster)
Bootstrap support for A3LSW5 as seed ortholog is 100%.

Group of orthologs #983. Best score 90 bits
Score difference with first non-orthologous sequence - L.major:90 S.stipitis:90

Q4Q2L6              	100.00%		A3LTI0              	100.00%
Bootstrap support for Q4Q2L6 as seed ortholog is 100%.
Bootstrap support for A3LTI0 as seed ortholog is 100%.

Group of orthologs #984. Best score 90 bits
Score difference with first non-orthologous sequence - L.major:90 S.stipitis:90

Q4Q1Q3              	100.00%		A3M062              	100.00%
Bootstrap support for Q4Q1Q3 as seed ortholog is 100%.
Bootstrap support for A3M062 as seed ortholog is 100%.

Group of orthologs #985. Best score 89 bits
Score difference with first non-orthologous sequence - L.major:89 S.stipitis:89

Q4Q2M5              	100.00%		A3LN54              	100.00%
                    	       		A3LNV4              	78.98%
                    	       		A3GH15              	67.95%
                    	       		A3LWG4              	54.99%
                    	       		A3LS83              	47.11%
                    	       		A3LRZ1              	41.16%
                    	       		A3LTD2              	39.05%
                    	       		A3LZM3              	36.25%
                    	       		A3LWY5              	35.03%
Bootstrap support for Q4Q2M5 as seed ortholog is 100%.
Bootstrap support for A3LN54 as seed ortholog is 100%.

Group of orthologs #986. Best score 89 bits
Score difference with first non-orthologous sequence - L.major:89 S.stipitis:4

E9AG08              	100.00%		A3GHQ6              	100.00%
Q4QHE4              	100.00%		A3GH88              	30.58%
Q4QHE2              	99.55%		
E9AG09              	43.03%		
Q4Q445              	28.41%		
Q4Q236              	6.90%		
Q4Q072              	6.34%		
Bootstrap support for E9AG08 as seed ortholog is 100%.
Bootstrap support for Q4QHE4 as seed ortholog is 100%.
Bootstrap support for A3GHQ6 as seed ortholog is 48%.
Alternative seed ortholog is A3LR42 (4 bits away from this cluster)

Group of orthologs #987. Best score 89 bits
Score difference with first non-orthologous sequence - L.major:89 S.stipitis:89

Q4Q3G4              	100.00%		A3LVB9              	100.00%
Q4Q9X4              	100.00%		
Bootstrap support for Q4Q3G4 as seed ortholog is 100%.
Bootstrap support for Q4Q9X4 as seed ortholog is 100%.
Bootstrap support for A3LVB9 as seed ortholog is 100%.

Group of orthologs #988. Best score 89 bits
Score difference with first non-orthologous sequence - L.major:89 S.stipitis:89

Q4QBM8              	100.00%		A3LSU6              	100.00%
Q4QBM7              	50.38%		
Bootstrap support for Q4QBM8 as seed ortholog is 100%.
Bootstrap support for A3LSU6 as seed ortholog is 100%.

Group of orthologs #989. Best score 89 bits
Score difference with first non-orthologous sequence - L.major:89 S.stipitis:89

Q4Q053              	100.00%		A3LMW7              	100.00%
Bootstrap support for Q4Q053 as seed ortholog is 100%.
Bootstrap support for A3LMW7 as seed ortholog is 100%.

Group of orthologs #990. Best score 89 bits
Score difference with first non-orthologous sequence - L.major:89 S.stipitis:89

Q4Q4P3              	100.00%		A3LVH5              	100.00%
Bootstrap support for Q4Q4P3 as seed ortholog is 100%.
Bootstrap support for A3LVH5 as seed ortholog is 100%.

Group of orthologs #991. Best score 88 bits
Score difference with first non-orthologous sequence - L.major:88 S.stipitis:88

Q4QG40              	100.00%		A3LNC5              	100.00%
                    	       		A3LRU8              	10.62%
Bootstrap support for Q4QG40 as seed ortholog is 100%.
Bootstrap support for A3LNC5 as seed ortholog is 100%.

Group of orthologs #992. Best score 88 bits
Score difference with first non-orthologous sequence - L.major:88 S.stipitis:88

E9AD08              	100.00%		A3GEW2              	100.00%
Bootstrap support for E9AD08 as seed ortholog is 100%.
Bootstrap support for A3GEW2 as seed ortholog is 100%.

Group of orthologs #993. Best score 88 bits
Score difference with first non-orthologous sequence - L.major:88 S.stipitis:88

Q4Q9F3              	100.00%		A3LNI8              	100.00%
Bootstrap support for Q4Q9F3 as seed ortholog is 100%.
Bootstrap support for A3LNI8 as seed ortholog is 100%.

Group of orthologs #994. Best score 87 bits
Score difference with first non-orthologous sequence - L.major:87 S.stipitis:21

E9AF78              	100.00%		A3LT57              	100.00%
Bootstrap support for E9AF78 as seed ortholog is 100%.
Bootstrap support for A3LT57 as seed ortholog is 72%.
Alternative seed ortholog is A3LZJ7 (21 bits away from this cluster)

Group of orthologs #995. Best score 87 bits
Score difference with first non-orthologous sequence - L.major:87 S.stipitis:87

Q4QFN1              	100.00%		A3LNF0              	100.00%
Bootstrap support for Q4QFN1 as seed ortholog is 100%.
Bootstrap support for A3LNF0 as seed ortholog is 100%.

Group of orthologs #996. Best score 86 bits
Score difference with first non-orthologous sequence - L.major:8 S.stipitis:86

Q4QHT9              	100.00%		A3GHC3              	100.00%
Q4QH97              	5.97%		A3LQX7              	83.23%
                    	       		A3LSZ8              	38.29%
                    	       		A3LYI1              	35.76%
                    	       		A3LNM5              	33.54%
                    	       		A3LQE1              	32.91%
                    	       		A3GFH9              	29.43%
                    	       		A3LQX6              	6.01%
Bootstrap support for Q4QHT9 as seed ortholog is 52%.
Alternative seed ortholog is Q4Q5N4 (8 bits away from this cluster)
Bootstrap support for A3GHC3 as seed ortholog is 100%.

Group of orthologs #997. Best score 86 bits
Score difference with first non-orthologous sequence - L.major:29 S.stipitis:15

E9AFI0              	100.00%		A3LXJ3              	100.00%
                    	       		A3LND9              	40.91%
Bootstrap support for E9AFI0 as seed ortholog is 79%.
Bootstrap support for A3LXJ3 as seed ortholog is 64%.
Alternative seed ortholog is A3LZE3 (15 bits away from this cluster)

Group of orthologs #998. Best score 86 bits
Score difference with first non-orthologous sequence - L.major:86 S.stipitis:86

Q4QEJ8              	100.00%		A3GI11              	100.00%
Bootstrap support for Q4QEJ8 as seed ortholog is 100%.
Bootstrap support for A3GI11 as seed ortholog is 100%.

Group of orthologs #999. Best score 86 bits
Score difference with first non-orthologous sequence - L.major:86 S.stipitis:86

Q4Q7P0              	100.00%		A3M0C5              	100.00%
Bootstrap support for Q4Q7P0 as seed ortholog is 100%.
Bootstrap support for A3M0C5 as seed ortholog is 100%.

Group of orthologs #1000. Best score 86 bits
Score difference with first non-orthologous sequence - L.major:86 S.stipitis:86

Q4Q8V7              	100.00%		A3LZR7              	100.00%
Bootstrap support for Q4Q8V7 as seed ortholog is 100%.
Bootstrap support for A3LZR7 as seed ortholog is 100%.

Group of orthologs #1001. Best score 86 bits
Score difference with first non-orthologous sequence - L.major:86 S.stipitis:30

Q4QGU3              	100.00%		A3LWH5              	100.00%
Bootstrap support for Q4QGU3 as seed ortholog is 100%.
Bootstrap support for A3LWH5 as seed ortholog is 79%.

Group of orthologs #1002. Best score 85 bits
Score difference with first non-orthologous sequence - L.major:85 S.stipitis:85

Q4Q141              	100.00%		A3GFL2              	100.00%
Q4QDP9              	100.00%		
Bootstrap support for Q4Q141 as seed ortholog is 100%.
Bootstrap support for Q4QDP9 as seed ortholog is 100%.
Bootstrap support for A3GFL2 as seed ortholog is 100%.

Group of orthologs #1003. Best score 85 bits
Score difference with first non-orthologous sequence - L.major:85 S.stipitis:85

E9AF39              	100.00%		A3LUB3              	100.00%
                    	       		A3GFG2              	39.14%
Bootstrap support for E9AF39 as seed ortholog is 100%.
Bootstrap support for A3LUB3 as seed ortholog is 100%.

Group of orthologs #1004. Best score 85 bits
Score difference with first non-orthologous sequence - L.major:85 S.stipitis:85

Q4QHL1              	100.00%		A3LNP9              	100.00%
                    	       		A3LNQ0              	53.51%
Bootstrap support for Q4QHL1 as seed ortholog is 100%.
Bootstrap support for A3LNP9 as seed ortholog is 100%.

Group of orthologs #1005. Best score 85 bits
Score difference with first non-orthologous sequence - L.major:85 S.stipitis:85

E9AET3              	100.00%		A3LZV2              	100.00%
Bootstrap support for E9AET3 as seed ortholog is 100%.
Bootstrap support for A3LZV2 as seed ortholog is 100%.

Group of orthologs #1006. Best score 84 bits
Score difference with first non-orthologous sequence - L.major:5 S.stipitis:84

E9ACT0              	100.00%		A3GGI8              	100.00%
Bootstrap support for E9ACT0 as seed ortholog is 62%.
Alternative seed ortholog is Q4QG42 (5 bits away from this cluster)
Bootstrap support for A3GGI8 as seed ortholog is 100%.

Group of orthologs #1007. Best score 84 bits
Score difference with first non-orthologous sequence - L.major:84 S.stipitis:84

E9AFZ4              	100.00%		A3LQS4              	100.00%
Bootstrap support for E9AFZ4 as seed ortholog is 100%.
Bootstrap support for A3LQS4 as seed ortholog is 100%.

Group of orthologs #1008. Best score 84 bits
Score difference with first non-orthologous sequence - L.major:84 S.stipitis:84

E9ADP0              	100.00%		A3LYC2              	100.00%
Bootstrap support for E9ADP0 as seed ortholog is 100%.
Bootstrap support for A3LYC2 as seed ortholog is 100%.

Group of orthologs #1009. Best score 84 bits
Score difference with first non-orthologous sequence - L.major:84 S.stipitis:84

Q4Q5W9              	100.00%		A3LQZ4              	100.00%
Bootstrap support for Q4Q5W9 as seed ortholog is 100%.
Bootstrap support for A3LQZ4 as seed ortholog is 100%.

Group of orthologs #1010. Best score 84 bits
Score difference with first non-orthologous sequence - L.major:84 S.stipitis:84

Q4QHC9              	100.00%		A3LPL5              	100.00%
Bootstrap support for Q4QHC9 as seed ortholog is 100%.
Bootstrap support for A3LPL5 as seed ortholog is 100%.

Group of orthologs #1011. Best score 84 bits
Score difference with first non-orthologous sequence - L.major:84 S.stipitis:84

Q4QGP0              	100.00%		A3LT60              	100.00%
Bootstrap support for Q4QGP0 as seed ortholog is 100%.
Bootstrap support for A3LT60 as seed ortholog is 100%.

Group of orthologs #1012. Best score 83 bits
Score difference with first non-orthologous sequence - L.major:83 S.stipitis:83

Q4Q0W7              	100.00%		A3GF23              	100.00%
Bootstrap support for Q4Q0W7 as seed ortholog is 100%.
Bootstrap support for A3GF23 as seed ortholog is 100%.

Group of orthologs #1013. Best score 83 bits
Score difference with first non-orthologous sequence - L.major:83 S.stipitis:83

Q4Q6K7              	100.00%		A3LQ81              	100.00%
Bootstrap support for Q4Q6K7 as seed ortholog is 100%.
Bootstrap support for A3LQ81 as seed ortholog is 100%.

Group of orthologs #1014. Best score 83 bits
Score difference with first non-orthologous sequence - L.major:83 S.stipitis:83

Q4QD71              	100.00%		A3GFP3              	100.00%
Bootstrap support for Q4QD71 as seed ortholog is 100%.
Bootstrap support for A3GFP3 as seed ortholog is 100%.

Group of orthologs #1015. Best score 83 bits
Score difference with first non-orthologous sequence - L.major:83 S.stipitis:83

Q4QDK2              	100.00%		A3GGS4              	100.00%
Bootstrap support for Q4QDK2 as seed ortholog is 100%.
Bootstrap support for A3GGS4 as seed ortholog is 100%.

Group of orthologs #1016. Best score 83 bits
Score difference with first non-orthologous sequence - L.major:83 S.stipitis:83

E9AFE0              	100.00%		A3M0C9              	100.00%
Bootstrap support for E9AFE0 as seed ortholog is 100%.
Bootstrap support for A3M0C9 as seed ortholog is 100%.

Group of orthologs #1017. Best score 82 bits
Score difference with first non-orthologous sequence - L.major:82 S.stipitis:82

Q4Q931              	100.00%		A3LQP4              	100.00%
                    	       		A3LWA3              	100.00%
Bootstrap support for Q4Q931 as seed ortholog is 100%.
Bootstrap support for A3LQP4 as seed ortholog is 100%.
Bootstrap support for A3LWA3 as seed ortholog is 100%.

Group of orthologs #1018. Best score 82 bits
Score difference with first non-orthologous sequence - L.major:82 S.stipitis:82

Q4Q734              	100.00%		A3M0M8              	100.00%
                    	       		A3LU30              	16.76%
Bootstrap support for Q4Q734 as seed ortholog is 100%.
Bootstrap support for A3M0M8 as seed ortholog is 100%.

Group of orthologs #1019. Best score 82 bits
Score difference with first non-orthologous sequence - L.major:82 S.stipitis:82

E9AFS7              	100.00%		A3GID0              	100.00%
Bootstrap support for E9AFS7 as seed ortholog is 100%.
Bootstrap support for A3GID0 as seed ortholog is 100%.

Group of orthologs #1020. Best score 82 bits
Score difference with first non-orthologous sequence - L.major:82 S.stipitis:82

E9AD99              	100.00%		A3LZJ1              	100.00%
Bootstrap support for E9AD99 as seed ortholog is 100%.
Bootstrap support for A3LZJ1 as seed ortholog is 100%.

Group of orthologs #1021. Best score 82 bits
Score difference with first non-orthologous sequence - L.major:82 S.stipitis:82

E9AFT6              	100.00%		A3LX48              	100.00%
Bootstrap support for E9AFT6 as seed ortholog is 100%.
Bootstrap support for A3LX48 as seed ortholog is 100%.

Group of orthologs #1022. Best score 82 bits
Score difference with first non-orthologous sequence - L.major:82 S.stipitis:82

Q4QES7              	100.00%		A3LN98              	100.00%
Bootstrap support for Q4QES7 as seed ortholog is 100%.
Bootstrap support for A3LN98 as seed ortholog is 100%.

Group of orthologs #1023. Best score 82 bits
Score difference with first non-orthologous sequence - L.major:23 S.stipitis:82

Q4QDY4              	100.00%		A3LQ56              	100.00%
Bootstrap support for Q4QDY4 as seed ortholog is 72%.
Alternative seed ortholog is E9AE93 (23 bits away from this cluster)
Bootstrap support for A3LQ56 as seed ortholog is 100%.

Group of orthologs #1024. Best score 82 bits
Score difference with first non-orthologous sequence - L.major:1 S.stipitis:82

Q4Q9K8              	100.00%		A3LXI5              	100.00%
Bootstrap support for Q4Q9K8 as seed ortholog is 63%.
Alternative seed ortholog is E9AF82 (1 bits away from this cluster)
Bootstrap support for A3LXI5 as seed ortholog is 100%.

Group of orthologs #1025. Best score 82 bits
Score difference with first non-orthologous sequence - L.major:82 S.stipitis:82

Q4QIR8              	100.00%		A3LRB1              	100.00%
Bootstrap support for Q4QIR8 as seed ortholog is 100%.
Bootstrap support for A3LRB1 as seed ortholog is 100%.

Group of orthologs #1026. Best score 82 bits
Score difference with first non-orthologous sequence - L.major:82 S.stipitis:82

Q4QHL3              	100.00%		A3LT51              	100.00%
Bootstrap support for Q4QHL3 as seed ortholog is 100%.
Bootstrap support for A3LT51 as seed ortholog is 100%.

Group of orthologs #1027. Best score 82 bits
Score difference with first non-orthologous sequence - L.major:10 S.stipitis:3

Q4QHM6              	100.00%		A3LU39              	100.00%
Bootstrap support for Q4QHM6 as seed ortholog is 70%.
Alternative seed ortholog is Q4QH22 (10 bits away from this cluster)
Bootstrap support for A3LU39 as seed ortholog is 57%.
Alternative seed ortholog is A3LSC2 (3 bits away from this cluster)

Group of orthologs #1028. Best score 82 bits
Score difference with first non-orthologous sequence - L.major:82 S.stipitis:23

Q4QDL3              	100.00%		A3LYT7              	100.00%
Bootstrap support for Q4QDL3 as seed ortholog is 100%.
Bootstrap support for A3LYT7 as seed ortholog is 71%.
Alternative seed ortholog is A3GGL1 (23 bits away from this cluster)

Group of orthologs #1029. Best score 81 bits
Score difference with first non-orthologous sequence - L.major:5 S.stipitis:10

E9AEU5              	100.00%		A3GGB2              	100.00%
E9AEU6              	22.02%		A3LX83              	100.00%
                    	       		A3GGB1              	66.51%
                    	       		A3LVX5              	31.74%
                    	       		A3LVX4              	30.98%
                    	       		A3LPE1              	28.72%
Bootstrap support for E9AEU5 as seed ortholog is 42%.
Alternative seed ortholog is E9AEL0 (5 bits away from this cluster)
Bootstrap support for A3GGB2 as seed ortholog is 63%.
Alternative seed ortholog is A3GHL5 (10 bits away from this cluster)
Bootstrap support for A3LX83 as seed ortholog is 65%.
Alternative seed ortholog is A3GHL5 (10 bits away from this cluster)

Group of orthologs #1030. Best score 81 bits
Score difference with first non-orthologous sequence - L.major:81 S.stipitis:81

Q4Q0G9              	100.00%		A3LRM2              	100.00%
Bootstrap support for Q4Q0G9 as seed ortholog is 100%.
Bootstrap support for A3LRM2 as seed ortholog is 100%.

Group of orthologs #1031. Best score 81 bits
Score difference with first non-orthologous sequence - L.major:12 S.stipitis:12

Q4Q3K6              	100.00%		A3LPD4              	100.00%
Bootstrap support for Q4Q3K6 as seed ortholog is 60%.
Alternative seed ortholog is Q4QBQ2 (12 bits away from this cluster)
Bootstrap support for A3LPD4 as seed ortholog is 61%.
Alternative seed ortholog is A3LVI4 (12 bits away from this cluster)

Group of orthologs #1032. Best score 81 bits
Score difference with first non-orthologous sequence - L.major:29 S.stipitis:8

Q4Q4L7              	100.00%		A3LQN5              	100.00%
Bootstrap support for Q4Q4L7 as seed ortholog is 74%.
Alternative seed ortholog is Q4QHD6 (29 bits away from this cluster)
Bootstrap support for A3LQN5 as seed ortholog is 57%.
Alternative seed ortholog is A3LYL3 (8 bits away from this cluster)

Group of orthologs #1033. Best score 81 bits
Score difference with first non-orthologous sequence - L.major:81 S.stipitis:81

Q4Q8G8              	100.00%		A3GHX2              	100.00%
Bootstrap support for Q4Q8G8 as seed ortholog is 100%.
Bootstrap support for A3GHX2 as seed ortholog is 100%.

Group of orthologs #1034. Best score 81 bits
Score difference with first non-orthologous sequence - L.major:81 S.stipitis:81

Q4QB81              	100.00%		A3M0J3              	100.00%
Bootstrap support for Q4QB81 as seed ortholog is 100%.
Bootstrap support for A3M0J3 as seed ortholog is 100%.

Group of orthologs #1035. Best score 80 bits
Score difference with first non-orthologous sequence - L.major:80 S.stipitis:80

E9ACF2              	100.00%		A3LRL1              	100.00%
Bootstrap support for E9ACF2 as seed ortholog is 100%.
Bootstrap support for A3LRL1 as seed ortholog is 100%.

Group of orthologs #1036. Best score 80 bits
Score difference with first non-orthologous sequence - L.major:80 S.stipitis:80

Q4Q8P3              	100.00%		A3GHS2              	100.00%
Bootstrap support for Q4Q8P3 as seed ortholog is 100%.
Bootstrap support for A3GHS2 as seed ortholog is 100%.

Group of orthologs #1037. Best score 80 bits
Score difference with first non-orthologous sequence - L.major:80 S.stipitis:80

Q4Q1E7              	100.00%		A3LVT7              	100.00%
Bootstrap support for Q4Q1E7 as seed ortholog is 100%.
Bootstrap support for A3LVT7 as seed ortholog is 100%.

Group of orthologs #1038. Best score 80 bits
Score difference with first non-orthologous sequence - L.major:80 S.stipitis:80

Q4Q1C7              	100.00%		A3LVZ2              	100.00%
Bootstrap support for Q4Q1C7 as seed ortholog is 100%.
Bootstrap support for A3LVZ2 as seed ortholog is 100%.

Group of orthologs #1039. Best score 80 bits
Score difference with first non-orthologous sequence - L.major:80 S.stipitis:80

Q4QIC2              	100.00%		A3LNK8              	100.00%
Bootstrap support for Q4QIC2 as seed ortholog is 100%.
Bootstrap support for A3LNK8 as seed ortholog is 100%.

Group of orthologs #1040. Best score 79 bits
Score difference with first non-orthologous sequence - L.major:15 S.stipitis:3

Q4QHF9              	100.00%		A3LQT8              	100.00%
Q4QHF8              	32.54%		A3LQT7              	45.64%
Bootstrap support for Q4QHF9 as seed ortholog is 64%.
Alternative seed ortholog is Q4Q0Z7 (15 bits away from this cluster)
Bootstrap support for A3LQT8 as seed ortholog is 50%.
Alternative seed ortholog is O00097 (3 bits away from this cluster)

Group of orthologs #1041. Best score 79 bits
Score difference with first non-orthologous sequence - L.major:79 S.stipitis:79

Q4Q5H7              	100.00%		A3GFC3              	100.00%
Bootstrap support for Q4Q5H7 as seed ortholog is 100%.
Bootstrap support for A3GFC3 as seed ortholog is 100%.

Group of orthologs #1042. Best score 79 bits
Score difference with first non-orthologous sequence - L.major:79 S.stipitis:79

Q4Q567              	100.00%		A3GHC5              	100.00%
Bootstrap support for Q4Q567 as seed ortholog is 100%.
Bootstrap support for A3GHC5 as seed ortholog is 100%.

Group of orthologs #1043. Best score 79 bits
Score difference with first non-orthologous sequence - L.major:79 S.stipitis:79

Q4Q0X2              	100.00%		A3LS82              	100.00%
Bootstrap support for Q4Q0X2 as seed ortholog is 100%.
Bootstrap support for A3LS82 as seed ortholog is 100%.

Group of orthologs #1044. Best score 79 bits
Score difference with first non-orthologous sequence - L.major:79 S.stipitis:79

Q4Q8J7              	100.00%		A3GGF1              	100.00%
Bootstrap support for Q4Q8J7 as seed ortholog is 100%.
Bootstrap support for A3GGF1 as seed ortholog is 100%.

Group of orthologs #1045. Best score 79 bits
Score difference with first non-orthologous sequence - L.major:79 S.stipitis:79

Q4QG97              	100.00%		A3LZI5              	100.00%
Bootstrap support for Q4QG97 as seed ortholog is 100%.
Bootstrap support for A3LZI5 as seed ortholog is 100%.

Group of orthologs #1046. Best score 78 bits
Score difference with first non-orthologous sequence - L.major:78 S.stipitis:12

E9ACW4              	100.00%		A3GF07              	100.00%
                    	       		A3GF05              	46.44%
                    	       		P50167              	14.87%
                    	       		A3LSQ5              	6.31%
Bootstrap support for E9ACW4 as seed ortholog is 100%.
Bootstrap support for A3GF07 as seed ortholog is 65%.
Alternative seed ortholog is A3LXS2 (12 bits away from this cluster)

Group of orthologs #1047. Best score 78 bits
Score difference with first non-orthologous sequence - L.major:78 S.stipitis:78

E9AF97              	100.00%		A3LYA4              	100.00%
Q4QIY9              	18.87%		
E9AD70              	14.60%		
Bootstrap support for E9AF97 as seed ortholog is 100%.
Bootstrap support for A3LYA4 as seed ortholog is 100%.

Group of orthologs #1048. Best score 78 bits
Score difference with first non-orthologous sequence - L.major:78 S.stipitis:78

Q4QGF2              	100.00%		A3LQN4              	100.00%
                    	       		A3GHZ7              	20.71%
Bootstrap support for Q4QGF2 as seed ortholog is 100%.
Bootstrap support for A3LQN4 as seed ortholog is 100%.

Group of orthologs #1049. Best score 78 bits
Score difference with first non-orthologous sequence - L.major:78 S.stipitis:11

Q4Q088              	100.00%		A3M099              	100.00%
Bootstrap support for Q4Q088 as seed ortholog is 100%.
Bootstrap support for A3M099 as seed ortholog is 68%.
Alternative seed ortholog is A3LW42 (11 bits away from this cluster)

Group of orthologs #1050. Best score 77 bits
Score difference with first non-orthologous sequence - L.major:13 S.stipitis:77

E9AD58              	100.00%		A3LWC8              	100.00%
                    	       		A3GFD7              	19.19%
Bootstrap support for E9AD58 as seed ortholog is 79%.
Bootstrap support for A3LWC8 as seed ortholog is 100%.

Group of orthologs #1051. Best score 77 bits
Score difference with first non-orthologous sequence - L.major:35 S.stipitis:13

E9AF06              	100.00%		A3LQ17              	100.00%
Bootstrap support for E9AF06 as seed ortholog is 87%.
Bootstrap support for A3LQ17 as seed ortholog is 69%.
Alternative seed ortholog is A3LQG0 (13 bits away from this cluster)

Group of orthologs #1052. Best score 77 bits
Score difference with first non-orthologous sequence - L.major:77 S.stipitis:77

E9AFF2              	100.00%		A3LUJ7              	100.00%
Bootstrap support for E9AFF2 as seed ortholog is 100%.
Bootstrap support for A3LUJ7 as seed ortholog is 100%.

Group of orthologs #1053. Best score 77 bits
Score difference with first non-orthologous sequence - L.major:77 S.stipitis:77

E9AFC7              	100.00%		A3LUV1              	100.00%
Bootstrap support for E9AFC7 as seed ortholog is 100%.
Bootstrap support for A3LUV1 as seed ortholog is 100%.

Group of orthologs #1054. Best score 77 bits
Score difference with first non-orthologous sequence - L.major:77 S.stipitis:77

Q4Q3E6              	100.00%		A3LSC3              	100.00%
Bootstrap support for Q4Q3E6 as seed ortholog is 100%.
Bootstrap support for A3LSC3 as seed ortholog is 100%.

Group of orthologs #1055. Best score 77 bits
Score difference with first non-orthologous sequence - L.major:77 S.stipitis:77

Q4Q6U2              	100.00%		A3LTL2              	100.00%
Bootstrap support for Q4Q6U2 as seed ortholog is 100%.
Bootstrap support for A3LTL2 as seed ortholog is 100%.

Group of orthologs #1056. Best score 77 bits
Score difference with first non-orthologous sequence - L.major:77 S.stipitis:77

Q4Q6Y3              	100.00%		A3LTX8              	100.00%
Bootstrap support for Q4Q6Y3 as seed ortholog is 100%.
Bootstrap support for A3LTX8 as seed ortholog is 100%.

Group of orthologs #1057. Best score 77 bits
Score difference with first non-orthologous sequence - L.major:77 S.stipitis:77

Q4Q933              	100.00%		A3LVP7              	100.00%
Bootstrap support for Q4Q933 as seed ortholog is 100%.
Bootstrap support for A3LVP7 as seed ortholog is 100%.

Group of orthologs #1058. Best score 77 bits
Score difference with first non-orthologous sequence - L.major:77 S.stipitis:77

Q4Q6Y2              	100.00%		A3LZ82              	100.00%
Bootstrap support for Q4Q6Y2 as seed ortholog is 100%.
Bootstrap support for A3LZ82 as seed ortholog is 100%.

Group of orthologs #1059. Best score 76 bits
Score difference with first non-orthologous sequence - L.major:76 S.stipitis:76

E9AE01              	100.00%		A3GH73              	100.00%
E9AE11              	89.32%		A3LS56              	16.73%
Q4QH14              	18.71%		A3LN43              	14.39%
E9AE09              	18.71%		
E9AE10              	18.63%		
Q4QH15              	18.39%		
Q4QFY5              	18.15%		
Q4Q1E4              	16.06%		
Q4Q5T8              	15.98%		
Q4QC28              	14.62%		
Q4Q6J1              	13.65%		
Q4QC27              	12.29%		
Q4QGU8              	8.35%		
Bootstrap support for E9AE01 as seed ortholog is 100%.
Bootstrap support for A3GH73 as seed ortholog is 100%.

Group of orthologs #1060. Best score 76 bits
Score difference with first non-orthologous sequence - L.major:76 S.stipitis:76

Q4Q426              	100.00%		A3LVT2              	100.00%
Q4Q660              	100.00%		
Q4Q673              	100.00%		
Bootstrap support for Q4Q426 as seed ortholog is 100%.
Bootstrap support for Q4Q660 as seed ortholog is 100%.
Bootstrap support for Q4Q673 as seed ortholog is 100%.
Bootstrap support for A3LVT2 as seed ortholog is 100%.

Group of orthologs #1061. Best score 76 bits
Score difference with first non-orthologous sequence - L.major:76 S.stipitis:76

E9AF24              	100.00%		A3LP06              	100.00%
Bootstrap support for E9AF24 as seed ortholog is 100%.
Bootstrap support for A3LP06 as seed ortholog is 100%.

Group of orthologs #1062. Best score 76 bits
Score difference with first non-orthologous sequence - L.major:76 S.stipitis:76

Q4Q3V5              	100.00%		A3LSK0              	100.00%
Bootstrap support for Q4Q3V5 as seed ortholog is 100%.
Bootstrap support for A3LSK0 as seed ortholog is 100%.

Group of orthologs #1063. Best score 76 bits
Score difference with first non-orthologous sequence - L.major:76 S.stipitis:76

Q4QAG3              	100.00%		A3LN57              	100.00%
Bootstrap support for Q4QAG3 as seed ortholog is 100%.
Bootstrap support for A3LN57 as seed ortholog is 100%.

Group of orthologs #1064. Best score 76 bits
Score difference with first non-orthologous sequence - L.major:76 S.stipitis:76

Q4QDE2              	100.00%		A3LT80              	100.00%
Bootstrap support for Q4QDE2 as seed ortholog is 100%.
Bootstrap support for A3LT80 as seed ortholog is 100%.

Group of orthologs #1065. Best score 76 bits
Score difference with first non-orthologous sequence - L.major:76 S.stipitis:76

Q9U178              	100.00%		A3LQS6              	100.00%
Bootstrap support for Q9U178 as seed ortholog is 100%.
Bootstrap support for A3LQS6 as seed ortholog is 100%.

Group of orthologs #1066. Best score 75 bits
Score difference with first non-orthologous sequence - L.major:75 S.stipitis:75

Q4Q055              	100.00%		A3GGB4              	100.00%
Bootstrap support for Q4Q055 as seed ortholog is 100%.
Bootstrap support for A3GGB4 as seed ortholog is 100%.

Group of orthologs #1067. Best score 75 bits
Score difference with first non-orthologous sequence - L.major:75 S.stipitis:75

Q4QEF8              	100.00%		A3GEY6              	100.00%
Bootstrap support for Q4QEF8 as seed ortholog is 100%.
Bootstrap support for A3GEY6 as seed ortholog is 100%.

Group of orthologs #1068. Best score 75 bits
Score difference with first non-orthologous sequence - L.major:75 S.stipitis:75

Q4Q5R4              	100.00%		A3LUL0              	100.00%
Bootstrap support for Q4Q5R4 as seed ortholog is 100%.
Bootstrap support for A3LUL0 as seed ortholog is 100%.

Group of orthologs #1069. Best score 75 bits
Score difference with first non-orthologous sequence - L.major:75 S.stipitis:75

Q4QI00              	100.00%		A3GHM1              	100.00%
Bootstrap support for Q4QI00 as seed ortholog is 100%.
Bootstrap support for A3GHM1 as seed ortholog is 100%.

Group of orthologs #1070. Best score 75 bits
Score difference with first non-orthologous sequence - L.major:75 S.stipitis:75

Q4Q9Y8              	100.00%		A3LYQ3              	100.00%
Bootstrap support for Q4Q9Y8 as seed ortholog is 100%.
Bootstrap support for A3LYQ3 as seed ortholog is 100%.

Group of orthologs #1071. Best score 75 bits
Score difference with first non-orthologous sequence - L.major:75 S.stipitis:75

Q8I8A4              	100.00%		A3LQA9              	100.00%
Bootstrap support for Q8I8A4 as seed ortholog is 100%.
Bootstrap support for A3LQA9 as seed ortholog is 100%.

Group of orthologs #1072. Best score 75 bits
Score difference with first non-orthologous sequence - L.major:75 S.stipitis:19

Q4QJ04              	100.00%		A3LW23              	100.00%
Bootstrap support for Q4QJ04 as seed ortholog is 100%.
Bootstrap support for A3LW23 as seed ortholog is 72%.
Alternative seed ortholog is A3LQ20 (19 bits away from this cluster)

Group of orthologs #1073. Best score 74 bits
Score difference with first non-orthologous sequence - L.major:74 S.stipitis:74

E9ACP0              	100.00%		A3LZE5              	100.00%
                    	       		A3LUT9              	46.62%
Bootstrap support for E9ACP0 as seed ortholog is 100%.
Bootstrap support for A3LZE5 as seed ortholog is 100%.

Group of orthologs #1074. Best score 74 bits
Score difference with first non-orthologous sequence - L.major:74 S.stipitis:74

Q4Q615              	100.00%		A3GG80              	100.00%
Bootstrap support for Q4Q615 as seed ortholog is 100%.
Bootstrap support for A3GG80 as seed ortholog is 100%.

Group of orthologs #1075. Best score 74 bits
Score difference with first non-orthologous sequence - L.major:74 S.stipitis:74

Q4Q1W6              	100.00%		A3LS71              	100.00%
Bootstrap support for Q4Q1W6 as seed ortholog is 100%.
Bootstrap support for A3LS71 as seed ortholog is 100%.

Group of orthologs #1076. Best score 74 bits
Score difference with first non-orthologous sequence - L.major:74 S.stipitis:74

Q4Q3Q4              	100.00%		A3LRC5              	100.00%
Bootstrap support for Q4Q3Q4 as seed ortholog is 100%.
Bootstrap support for A3LRC5 as seed ortholog is 100%.

Group of orthologs #1077. Best score 74 bits
Score difference with first non-orthologous sequence - L.major:74 S.stipitis:74

Q4Q7Q1              	100.00%		A3LSI8              	100.00%
Bootstrap support for Q4Q7Q1 as seed ortholog is 100%.
Bootstrap support for A3LSI8 as seed ortholog is 100%.

Group of orthologs #1078. Best score 73 bits
Score difference with first non-orthologous sequence - L.major:73 S.stipitis:73

Q4Q9D0              	100.00%		A3GGS7              	100.00%
Q4Q9D2              	100.00%		
Bootstrap support for Q4Q9D0 as seed ortholog is 100%.
Bootstrap support for Q4Q9D2 as seed ortholog is 100%.
Bootstrap support for A3GGS7 as seed ortholog is 100%.

Group of orthologs #1079. Best score 73 bits
Score difference with first non-orthologous sequence - L.major:73 S.stipitis:3

Q4QG08              	100.00%		A3LTX1              	100.00%
Q4QG09              	33.50%		
Bootstrap support for Q4QG08 as seed ortholog is 100%.
Bootstrap support for A3LTX1 as seed ortholog is 50%.
Alternative seed ortholog is A3LTP6 (3 bits away from this cluster)

Group of orthologs #1080. Best score 73 bits
Score difference with first non-orthologous sequence - L.major:73 S.stipitis:73

Q4QFX0              	100.00%		A3LYD7              	100.00%
Q4Q5X4              	14.39%		
Bootstrap support for Q4QFX0 as seed ortholog is 100%.
Bootstrap support for A3LYD7 as seed ortholog is 100%.

Group of orthologs #1081. Best score 73 bits
Score difference with first non-orthologous sequence - L.major:73 S.stipitis:73

Q4Q0P7              	100.00%		A3LPX3              	100.00%
Bootstrap support for Q4Q0P7 as seed ortholog is 100%.
Bootstrap support for A3LPX3 as seed ortholog is 100%.

Group of orthologs #1082. Best score 73 bits
Score difference with first non-orthologous sequence - L.major:73 S.stipitis:73

Q4QA28              	100.00%		A3LN40              	100.00%
Bootstrap support for Q4QA28 as seed ortholog is 100%.
Bootstrap support for A3LN40 as seed ortholog is 100%.

Group of orthologs #1083. Best score 73 bits
Score difference with first non-orthologous sequence - L.major:73 S.stipitis:73

Q4Q244              	100.00%		A3LZ07              	100.00%
Bootstrap support for Q4Q244 as seed ortholog is 100%.
Bootstrap support for A3LZ07 as seed ortholog is 100%.

Group of orthologs #1084. Best score 72 bits
Score difference with first non-orthologous sequence - L.major:72 S.stipitis:10

Q4Q574              	100.00%		A3GGQ3              	100.00%
Bootstrap support for Q4Q574 as seed ortholog is 100%.
Bootstrap support for A3GGQ3 as seed ortholog is 63%.
Alternative seed ortholog is A3LZ00 (10 bits away from this cluster)

Group of orthologs #1085. Best score 72 bits
Score difference with first non-orthologous sequence - L.major:72 S.stipitis:72

E9AFS9              	100.00%		A3LRN5              	100.00%
Bootstrap support for E9AFS9 as seed ortholog is 100%.
Bootstrap support for A3LRN5 as seed ortholog is 100%.

Group of orthologs #1086. Best score 72 bits
Score difference with first non-orthologous sequence - L.major:5 S.stipitis:23

Q4Q6P4              	100.00%		A3LQ86              	100.00%
Bootstrap support for Q4Q6P4 as seed ortholog is 55%.
Alternative seed ortholog is Q4QHD6 (5 bits away from this cluster)
Bootstrap support for A3LQ86 as seed ortholog is 64%.
Alternative seed ortholog is A3GFK1 (23 bits away from this cluster)

Group of orthologs #1087. Best score 72 bits
Score difference with first non-orthologous sequence - L.major:72 S.stipitis:72

Q4QA77              	100.00%		A3LQI3              	100.00%
Bootstrap support for Q4QA77 as seed ortholog is 100%.
Bootstrap support for A3LQI3 as seed ortholog is 100%.

Group of orthologs #1088. Best score 71 bits
Score difference with first non-orthologous sequence - L.major:2 S.stipitis:71

Q4QBK5              	100.00%		A3LQY2              	100.00%
Q4Q2F7              	20.87%		
Q4Q538              	14.80%		
Bootstrap support for Q4QBK5 as seed ortholog is 54%.
Alternative seed ortholog is Q4Q6R2 (2 bits away from this cluster)
Bootstrap support for A3LQY2 as seed ortholog is 100%.

Group of orthologs #1089. Best score 71 bits
Score difference with first non-orthologous sequence - L.major:71 S.stipitis:71

E9ACT7              	100.00%		A3LZL8              	100.00%
Q9U1D8              	100.00%		
Bootstrap support for E9ACT7 as seed ortholog is 100%.
Bootstrap support for Q9U1D8 as seed ortholog is 100%.
Bootstrap support for A3LZL8 as seed ortholog is 100%.

Group of orthologs #1090. Best score 71 bits
Score difference with first non-orthologous sequence - L.major:71 S.stipitis:7

Q4QD58              	100.00%		A3LPF7              	100.00%
Q4Q726              	21.70%		
Bootstrap support for Q4QD58 as seed ortholog is 100%.
Bootstrap support for A3LPF7 as seed ortholog is 67%.
Alternative seed ortholog is A3LUU7 (7 bits away from this cluster)

Group of orthologs #1091. Best score 71 bits
Score difference with first non-orthologous sequence - L.major:71 S.stipitis:71

Q4Q266              	100.00%		A3GEV2              	100.00%
Bootstrap support for Q4Q266 as seed ortholog is 100%.
Bootstrap support for A3GEV2 as seed ortholog is 100%.

Group of orthologs #1092. Best score 71 bits
Score difference with first non-orthologous sequence - L.major:71 S.stipitis:71

E9AD06              	100.00%		A3LUI7              	100.00%
Bootstrap support for E9AD06 as seed ortholog is 100%.
Bootstrap support for A3LUI7 as seed ortholog is 100%.

Group of orthologs #1093. Best score 71 bits
Score difference with first non-orthologous sequence - L.major:71 S.stipitis:71

E9ADD4              	100.00%		A3LX93              	100.00%
Bootstrap support for E9ADD4 as seed ortholog is 100%.
Bootstrap support for A3LX93 as seed ortholog is 100%.

Group of orthologs #1094. Best score 71 bits
Score difference with first non-orthologous sequence - L.major:71 S.stipitis:71

Q4Q8I8              	100.00%		A3LP63              	100.00%
Bootstrap support for Q4Q8I8 as seed ortholog is 100%.
Bootstrap support for A3LP63 as seed ortholog is 100%.

Group of orthologs #1095. Best score 71 bits
Score difference with first non-orthologous sequence - L.major:71 S.stipitis:71

Q4QJ82              	100.00%		A3GGY3              	100.00%
Bootstrap support for Q4QJ82 as seed ortholog is 100%.
Bootstrap support for A3GGY3 as seed ortholog is 100%.

Group of orthologs #1096. Best score 70 bits
Score difference with first non-orthologous sequence - L.major:70 S.stipitis:70

Q9BHD5              	100.00%		A3LUV6              	100.00%
Q4Q6I0              	17.27%		
Bootstrap support for Q9BHD5 as seed ortholog is 100%.
Bootstrap support for A3LUV6 as seed ortholog is 100%.

Group of orthologs #1097. Best score 70 bits
Score difference with first non-orthologous sequence - L.major:70 S.stipitis:70

O15922              	100.00%		A3GFP4              	100.00%
Bootstrap support for O15922 as seed ortholog is 100%.
Bootstrap support for A3GFP4 as seed ortholog is 100%.

Group of orthologs #1098. Best score 70 bits
Score difference with first non-orthologous sequence - L.major:70 S.stipitis:70

Q4Q5F4              	100.00%		A3GFG7              	100.00%
Bootstrap support for Q4Q5F4 as seed ortholog is 100%.
Bootstrap support for A3GFG7 as seed ortholog is 100%.

Group of orthologs #1099. Best score 70 bits
Score difference with first non-orthologous sequence - L.major:70 S.stipitis:70

Q4Q5N1              	100.00%		A3LQH2              	100.00%
Bootstrap support for Q4Q5N1 as seed ortholog is 100%.
Bootstrap support for A3LQH2 as seed ortholog is 100%.

Group of orthologs #1100. Best score 70 bits
Score difference with first non-orthologous sequence - L.major:70 S.stipitis:70

Q4QAL1              	100.00%		A3LVH2              	100.00%
Bootstrap support for Q4QAL1 as seed ortholog is 100%.
Bootstrap support for A3LVH2 as seed ortholog is 100%.

Group of orthologs #1101. Best score 70 bits
Score difference with first non-orthologous sequence - L.major:70 S.stipitis:70

Q4Q965              	100.00%		A3LZC3              	100.00%
Bootstrap support for Q4Q965 as seed ortholog is 100%.
Bootstrap support for A3LZC3 as seed ortholog is 100%.

Group of orthologs #1102. Best score 70 bits
Score difference with first non-orthologous sequence - L.major:70 S.stipitis:70

Q4QJ50              	100.00%		A3LY19              	100.00%
Bootstrap support for Q4QJ50 as seed ortholog is 100%.
Bootstrap support for A3LY19 as seed ortholog is 100%.

Group of orthologs #1103. Best score 69 bits
Score difference with first non-orthologous sequence - L.major:22 S.stipitis:69

E9AC16              	100.00%		A3GI91              	100.00%
                    	       		A3GG43              	16.18%
Bootstrap support for E9AC16 as seed ortholog is 87%.
Bootstrap support for A3GI91 as seed ortholog is 100%.

Group of orthologs #1104. Best score 69 bits
Score difference with first non-orthologous sequence - L.major:69 S.stipitis:69

Q4Q1L9              	100.00%		A3LUV3              	100.00%
                    	       		A3LRZ4              	7.92%
Bootstrap support for Q4Q1L9 as seed ortholog is 100%.
Bootstrap support for A3LUV3 as seed ortholog is 100%.

Group of orthologs #1105. Best score 69 bits
Score difference with first non-orthologous sequence - L.major:69 S.stipitis:69

E9ACV5              	100.00%		A3M0A8              	100.00%
Q4QIG6              	7.61%		
Bootstrap support for E9ACV5 as seed ortholog is 100%.
Bootstrap support for A3M0A8 as seed ortholog is 100%.

Group of orthologs #1106. Best score 69 bits
Score difference with first non-orthologous sequence - L.major:69 S.stipitis:69

Q4QA12              	100.00%		A3GF37              	100.00%
Bootstrap support for Q4QA12 as seed ortholog is 100%.
Bootstrap support for A3GF37 as seed ortholog is 100%.

Group of orthologs #1107. Best score 69 bits
Score difference with first non-orthologous sequence - L.major:69 S.stipitis:69

Q4Q860              	100.00%		A3LQW8              	100.00%
Bootstrap support for Q4Q860 as seed ortholog is 100%.
Bootstrap support for A3LQW8 as seed ortholog is 100%.

Group of orthologs #1108. Best score 68 bits
Score difference with first non-orthologous sequence - L.major:20 S.stipitis:68

Q9XZY9              	100.00%		A3LNF3              	100.00%
                    	       		A3GHQ8              	22.27%
Bootstrap support for Q9XZY9 as seed ortholog is 51%.
Alternative seed ortholog is Q4QG82 (20 bits away from this cluster)
Bootstrap support for A3LNF3 as seed ortholog is 100%.

Group of orthologs #1109. Best score 68 bits
Score difference with first non-orthologous sequence - L.major:68 S.stipitis:68

E9ADI4              	100.00%		A3LRS5              	100.00%
Bootstrap support for E9ADI4 as seed ortholog is 100%.
Bootstrap support for A3LRS5 as seed ortholog is 100%.

Group of orthologs #1110. Best score 68 bits
Score difference with first non-orthologous sequence - L.major:1 S.stipitis:68

E9AFI4              	100.00%		A3LR67              	100.00%
Bootstrap support for E9AFI4 as seed ortholog is 48%.
Alternative seed ortholog is Q4QCL7 (1 bits away from this cluster)
Bootstrap support for A3LR67 as seed ortholog is 100%.

Group of orthologs #1111. Best score 68 bits
Score difference with first non-orthologous sequence - L.major:68 S.stipitis:68

E9ADK9              	100.00%		A3LVM0              	100.00%
Bootstrap support for E9ADK9 as seed ortholog is 100%.
Bootstrap support for A3LVM0 as seed ortholog is 100%.

Group of orthologs #1112. Best score 68 bits
Score difference with first non-orthologous sequence - L.major:68 S.stipitis:68

Q4Q835              	100.00%		A3LQE7              	100.00%
Bootstrap support for Q4Q835 as seed ortholog is 100%.
Bootstrap support for A3LQE7 as seed ortholog is 100%.

Group of orthologs #1113. Best score 68 bits
Score difference with first non-orthologous sequence - L.major:14 S.stipitis:68

Q4QHM8              	100.00%		A3LP94              	100.00%
Bootstrap support for Q4QHM8 as seed ortholog is 75%.
Bootstrap support for A3LP94 as seed ortholog is 100%.

Group of orthologs #1114. Best score 67 bits
Score difference with first non-orthologous sequence - L.major:67 S.stipitis:67

E9AE16              	100.00%		A3GEW4              	100.00%
Q4QIR7              	23.66%		
Bootstrap support for E9AE16 as seed ortholog is 100%.
Bootstrap support for A3GEW4 as seed ortholog is 100%.

Group of orthologs #1115. Best score 67 bits
Score difference with first non-orthologous sequence - L.major:67 S.stipitis:67

Q4Q8S1              	100.00%		A3LW67              	100.00%
                    	       		A3LPA4              	16.26%
Bootstrap support for Q4Q8S1 as seed ortholog is 100%.
Bootstrap support for A3LW67 as seed ortholog is 100%.

Group of orthologs #1116. Best score 67 bits
Score difference with first non-orthologous sequence - L.major:67 S.stipitis:67

Q4Q7R8              	100.00%		A3LR73              	100.00%
Bootstrap support for Q4Q7R8 as seed ortholog is 100%.
Bootstrap support for A3LR73 as seed ortholog is 100%.

Group of orthologs #1117. Best score 67 bits
Score difference with first non-orthologous sequence - L.major:67 S.stipitis:67

Q4Q7I2              	100.00%		A3LUU2              	100.00%
Bootstrap support for Q4Q7I2 as seed ortholog is 100%.
Bootstrap support for A3LUU2 as seed ortholog is 100%.

Group of orthologs #1118. Best score 67 bits
Score difference with first non-orthologous sequence - L.major:67 S.stipitis:67

Q4QAL3              	100.00%		A3LXU5              	100.00%
Bootstrap support for Q4QAL3 as seed ortholog is 100%.
Bootstrap support for A3LXU5 as seed ortholog is 100%.

Group of orthologs #1119. Best score 66 bits
Score difference with first non-orthologous sequence - L.major:66 S.stipitis:66

Q4QJC1              	100.00%		A3LQG7              	100.00%
E9ACN7              	12.45%		A3LZA6              	19.62%
Q4QA90              	10.12%		
Bootstrap support for Q4QJC1 as seed ortholog is 100%.
Bootstrap support for A3LQG7 as seed ortholog is 100%.

Group of orthologs #1120. Best score 66 bits
Score difference with first non-orthologous sequence - L.major:66 S.stipitis:66

Q4Q8B9              	100.00%		A3GHM2              	100.00%
Q4Q8B8              	74.95%		A3LU22              	56.57%
Bootstrap support for Q4Q8B9 as seed ortholog is 100%.
Bootstrap support for A3GHM2 as seed ortholog is 100%.

Group of orthologs #1121. Best score 66 bits
Score difference with first non-orthologous sequence - L.major:66 S.stipitis:66

Q4QAZ8              	100.00%		A3LNU7              	100.00%
Q4QAZ9              	14.73%		
Bootstrap support for Q4QAZ8 as seed ortholog is 100%.
Bootstrap support for A3LNU7 as seed ortholog is 100%.

Group of orthologs #1122. Best score 66 bits
Score difference with first non-orthologous sequence - L.major:66 S.stipitis:66

Q4Q1X7              	100.00%		A3LTX2              	100.00%
Bootstrap support for Q4Q1X7 as seed ortholog is 100%.
Bootstrap support for A3LTX2 as seed ortholog is 100%.

Group of orthologs #1123. Best score 66 bits
Score difference with first non-orthologous sequence - L.major:66 S.stipitis:66

E9ADQ2              	100.00%		A3LZF5              	100.00%
Bootstrap support for E9ADQ2 as seed ortholog is 100%.
Bootstrap support for A3LZF5 as seed ortholog is 100%.

Group of orthologs #1124. Best score 66 bits
Score difference with first non-orthologous sequence - L.major:66 S.stipitis:66

Q4Q7W1              	100.00%		A3LRR2              	100.00%
Bootstrap support for Q4Q7W1 as seed ortholog is 100%.
Bootstrap support for A3LRR2 as seed ortholog is 100%.

Group of orthologs #1125. Best score 66 bits
Score difference with first non-orthologous sequence - L.major:66 S.stipitis:66

Q4Q3L7              	100.00%		A3LW18              	100.00%
Bootstrap support for Q4Q3L7 as seed ortholog is 100%.
Bootstrap support for A3LW18 as seed ortholog is 100%.

Group of orthologs #1126. Best score 66 bits
Score difference with first non-orthologous sequence - L.major:66 S.stipitis:66

Q4QEQ0              	100.00%		A3LQI9              	100.00%
Bootstrap support for Q4QEQ0 as seed ortholog is 100%.
Bootstrap support for A3LQI9 as seed ortholog is 100%.

Group of orthologs #1127. Best score 65 bits
Score difference with first non-orthologous sequence - L.major:65 S.stipitis:65

Q4Q684              	100.00%		A3LXQ7              	100.00%
                    	       		A3LSZ6              	85.50%
                    	       		A3LPX2              	9.21%
Bootstrap support for Q4Q684 as seed ortholog is 100%.
Bootstrap support for A3LXQ7 as seed ortholog is 100%.

Group of orthologs #1128. Best score 65 bits
Score difference with first non-orthologous sequence - L.major:65 S.stipitis:65

Q4QFR3              	100.00%		A3GHF3              	100.00%
Q4QFR9              	8.99%		
Bootstrap support for Q4QFR3 as seed ortholog is 100%.
Bootstrap support for A3GHF3 as seed ortholog is 100%.

Group of orthologs #1129. Best score 65 bits
Score difference with first non-orthologous sequence - L.major:65 S.stipitis:65

E9AEI8              	100.00%		A3M0E2              	100.00%
Bootstrap support for E9AEI8 as seed ortholog is 100%.
Bootstrap support for A3M0E2 as seed ortholog is 100%.

Group of orthologs #1130. Best score 65 bits
Score difference with first non-orthologous sequence - L.major:65 S.stipitis:65

Q4QBH3              	100.00%		A3LU49              	100.00%
Bootstrap support for Q4QBH3 as seed ortholog is 100%.
Bootstrap support for A3LU49 as seed ortholog is 100%.

Group of orthologs #1131. Best score 64 bits
Score difference with first non-orthologous sequence - L.major:64 S.stipitis:64

Q4QG33              	100.00%		A3LSV7              	100.00%
Q4QH25              	26.70%		
Q4QF59              	24.76%		
Q4QF58              	24.54%		
Q4Q1M9              	23.25%		
Bootstrap support for Q4QG33 as seed ortholog is 100%.
Bootstrap support for A3LSV7 as seed ortholog is 100%.

Group of orthologs #1132. Best score 64 bits
Score difference with first non-orthologous sequence - L.major:64 S.stipitis:64

E9AF13              	100.00%		A3LRS0              	100.00%
Q4QCE1              	100.00%		
Bootstrap support for E9AF13 as seed ortholog is 100%.
Bootstrap support for Q4QCE1 as seed ortholog is 100%.
Bootstrap support for A3LRS0 as seed ortholog is 100%.

Group of orthologs #1133. Best score 64 bits
Score difference with first non-orthologous sequence - L.major:64 S.stipitis:64

E9ADE3              	100.00%		A3LNZ7              	100.00%
Bootstrap support for E9ADE3 as seed ortholog is 100%.
Bootstrap support for A3LNZ7 as seed ortholog is 100%.

Group of orthologs #1134. Best score 64 bits
Score difference with first non-orthologous sequence - L.major:64 S.stipitis:64

E9AFN3              	100.00%		A3GHW4              	100.00%
Bootstrap support for E9AFN3 as seed ortholog is 100%.
Bootstrap support for A3GHW4 as seed ortholog is 100%.

Group of orthologs #1135. Best score 64 bits
Score difference with first non-orthologous sequence - L.major:64 S.stipitis:64

Q4Q2R1              	100.00%		A3GFM6              	100.00%
Bootstrap support for Q4Q2R1 as seed ortholog is 100%.
Bootstrap support for A3GFM6 as seed ortholog is 100%.

Group of orthologs #1136. Best score 64 bits
Score difference with first non-orthologous sequence - L.major:64 S.stipitis:64

Q4Q817              	100.00%		A3LSG4              	100.00%
Bootstrap support for Q4Q817 as seed ortholog is 100%.
Bootstrap support for A3LSG4 as seed ortholog is 100%.

Group of orthologs #1137. Best score 64 bits
Score difference with first non-orthologous sequence - L.major:64 S.stipitis:64

Q4QEQ4              	100.00%		A3LR25              	100.00%
Bootstrap support for Q4QEQ4 as seed ortholog is 100%.
Bootstrap support for A3LR25 as seed ortholog is 100%.

Group of orthologs #1138. Best score 64 bits
Score difference with first non-orthologous sequence - L.major:64 S.stipitis:24

Q4QDH9              	100.00%		A3LW94              	100.00%
Bootstrap support for Q4QDH9 as seed ortholog is 100%.
Bootstrap support for A3LW94 as seed ortholog is 85%.

Group of orthologs #1139. Best score 64 bits
Score difference with first non-orthologous sequence - L.major:64 S.stipitis:64

Q9U0T7              	100.00%		A3LXY7              	100.00%
Bootstrap support for Q9U0T7 as seed ortholog is 100%.
Bootstrap support for A3LXY7 as seed ortholog is 100%.

Group of orthologs #1140. Best score 63 bits
Score difference with first non-orthologous sequence - L.major:63 S.stipitis:63

Q4QAH4              	100.00%		A3GHN7              	100.00%
E9ADZ3              	7.54%		A3LYF9              	7.82%
E9ADZ8              	5.66%		A3LPW5              	5.19%
E9ADZ4              	5.05%		
E9ADZ5              	5.05%		
Bootstrap support for Q4QAH4 as seed ortholog is 100%.
Bootstrap support for A3GHN7 as seed ortholog is 100%.

Group of orthologs #1141. Best score 63 bits
Score difference with first non-orthologous sequence - L.major:63 S.stipitis:63

Q4Q0V8              	100.00%		A3LNK9              	100.00%
Bootstrap support for Q4Q0V8 as seed ortholog is 100%.
Bootstrap support for A3LNK9 as seed ortholog is 100%.

Group of orthologs #1142. Best score 63 bits
Score difference with first non-orthologous sequence - L.major:63 S.stipitis:3

Q4QAC6              	100.00%		A3GH20              	100.00%
Bootstrap support for Q4QAC6 as seed ortholog is 100%.
Bootstrap support for A3GH20 as seed ortholog is 57%.
Alternative seed ortholog is A3LY28 (3 bits away from this cluster)

Group of orthologs #1143. Best score 63 bits
Score difference with first non-orthologous sequence - L.major:63 S.stipitis:63

Q4Q5Z9              	100.00%		A3M0N0              	100.00%
Bootstrap support for Q4Q5Z9 as seed ortholog is 100%.
Bootstrap support for A3M0N0 as seed ortholog is 100%.

Group of orthologs #1144. Best score 62 bits
Score difference with first non-orthologous sequence - L.major:62 S.stipitis:62

Q4Q9L6              	100.00%		A3LU40              	100.00%
Bootstrap support for Q4Q9L6 as seed ortholog is 100%.
Bootstrap support for A3LU40 as seed ortholog is 100%.

Group of orthologs #1145. Best score 62 bits
Score difference with first non-orthologous sequence - L.major:62 S.stipitis:62

Q4QHB1              	100.00%		A3LSC1              	100.00%
Bootstrap support for Q4QHB1 as seed ortholog is 100%.
Bootstrap support for A3LSC1 as seed ortholog is 100%.

Group of orthologs #1146. Best score 62 bits
Score difference with first non-orthologous sequence - L.major:62 S.stipitis:62

Q4QC06              	100.00%		A3M0G0              	100.00%
Bootstrap support for Q4QC06 as seed ortholog is 100%.
Bootstrap support for A3M0G0 as seed ortholog is 100%.

Group of orthologs #1147. Best score 61 bits
Score difference with first non-orthologous sequence - L.major:61 S.stipitis:61

Q4QBB6              	100.00%		A3LMR8              	100.00%
Q9U0V7              	27.41%		
Q4QBB7              	18.51%		
Bootstrap support for Q4QBB6 as seed ortholog is 100%.
Bootstrap support for A3LMR8 as seed ortholog is 100%.

Group of orthologs #1148. Best score 61 bits
Score difference with first non-orthologous sequence - L.major:8 S.stipitis:19

Q01782              	100.00%		A3LUE6              	100.00%
                    	       		A3LXZ8              	71.20%
Bootstrap support for Q01782 as seed ortholog is 60%.
Alternative seed ortholog is Q4Q177 (8 bits away from this cluster)
Bootstrap support for A3LUE6 as seed ortholog is 71%.
Alternative seed ortholog is A3LXS2 (19 bits away from this cluster)

Group of orthologs #1149. Best score 61 bits
Score difference with first non-orthologous sequence - L.major:61 S.stipitis:61

Q4Q9E1              	100.00%		A3GH99              	100.00%
Q4QJI8              	5.37%		
Bootstrap support for Q4Q9E1 as seed ortholog is 100%.
Bootstrap support for A3GH99 as seed ortholog is 100%.

Group of orthologs #1150. Best score 61 bits
Score difference with first non-orthologous sequence - L.major:61 S.stipitis:61

Q4QBG9              	100.00%		A3LWL7              	100.00%
                    	       		A3LPU2              	19.19%
Bootstrap support for Q4QBG9 as seed ortholog is 100%.
Bootstrap support for A3LWL7 as seed ortholog is 100%.

Group of orthologs #1151. Best score 61 bits
Score difference with first non-orthologous sequence - L.major:61 S.stipitis:61

Q4Q8V1              	100.00%		A3LSL1              	100.00%
Bootstrap support for Q4Q8V1 as seed ortholog is 100%.
Bootstrap support for A3LSL1 as seed ortholog is 100%.

Group of orthologs #1152. Best score 61 bits
Score difference with first non-orthologous sequence - L.major:61 S.stipitis:61

Q4Q8S8              	100.00%		A3LT21              	100.00%
Bootstrap support for Q4Q8S8 as seed ortholog is 100%.
Bootstrap support for A3LT21 as seed ortholog is 100%.

Group of orthologs #1153. Best score 61 bits
Score difference with first non-orthologous sequence - L.major:61 S.stipitis:61

Q4QCT2              	100.00%		A3LPC0              	100.00%
Bootstrap support for Q4QCT2 as seed ortholog is 100%.
Bootstrap support for A3LPC0 as seed ortholog is 100%.

Group of orthologs #1154. Best score 61 bits
Score difference with first non-orthologous sequence - L.major:61 S.stipitis:61

Q4QG06              	100.00%		A3GH31              	100.00%
Bootstrap support for Q4QG06 as seed ortholog is 100%.
Bootstrap support for A3GH31 as seed ortholog is 100%.

Group of orthologs #1155. Best score 61 bits
Score difference with first non-orthologous sequence - L.major:61 S.stipitis:61

Q4Q9F9              	100.00%		A3LYP8              	100.00%
Bootstrap support for Q4Q9F9 as seed ortholog is 100%.
Bootstrap support for A3LYP8 as seed ortholog is 100%.

Group of orthologs #1156. Best score 60 bits
Score difference with first non-orthologous sequence - L.major:60 S.stipitis:16

Q4Q2F6              	100.00%		A3LR47              	100.00%
Bootstrap support for Q4Q2F6 as seed ortholog is 100%.
Bootstrap support for A3LR47 as seed ortholog is 83%.

Group of orthologs #1157. Best score 60 bits
Score difference with first non-orthologous sequence - L.major:60 S.stipitis:60

E9AFS3              	100.00%		A3LVF3              	100.00%
Bootstrap support for E9AFS3 as seed ortholog is 100%.
Bootstrap support for A3LVF3 as seed ortholog is 100%.

Group of orthologs #1158. Best score 60 bits
Score difference with first non-orthologous sequence - L.major:6 S.stipitis:60

E9AEX0              	100.00%		A3LWI2              	100.00%
Bootstrap support for E9AEX0 as seed ortholog is 52%.
Alternative seed ortholog is E9ADC3 (6 bits away from this cluster)
Bootstrap support for A3LWI2 as seed ortholog is 100%.

Group of orthologs #1159. Best score 60 bits
Score difference with first non-orthologous sequence - L.major:60 S.stipitis:60

Q4QD96              	100.00%		A3GI27              	100.00%
Bootstrap support for Q4QD96 as seed ortholog is 100%.
Bootstrap support for A3GI27 as seed ortholog is 100%.

Group of orthologs #1160. Best score 60 bits
Score difference with first non-orthologous sequence - L.major:60 S.stipitis:60

Q4QEW6              	100.00%		A3LTD1              	100.00%
Bootstrap support for Q4QEW6 as seed ortholog is 100%.
Bootstrap support for A3LTD1 as seed ortholog is 100%.

Group of orthologs #1161. Best score 59 bits
Score difference with first non-orthologous sequence - L.major:59 S.stipitis:5

Q4QDE5              	100.00%		A3LXX0              	100.00%
Q4QET9              	8.40%		
Bootstrap support for Q4QDE5 as seed ortholog is 100%.
Bootstrap support for A3LXX0 as seed ortholog is 53%.
Alternative seed ortholog is A3LUK8 (5 bits away from this cluster)

Group of orthologs #1162. Best score 59 bits
Score difference with first non-orthologous sequence - L.major:59 S.stipitis:59

E9AC87              	100.00%		A3GHS1              	100.00%
Bootstrap support for E9AC87 as seed ortholog is 100%.
Bootstrap support for A3GHS1 as seed ortholog is 100%.

Group of orthologs #1163. Best score 59 bits
Score difference with first non-orthologous sequence - L.major:59 S.stipitis:59

E9AC24              	100.00%		A3LUD8              	100.00%
Bootstrap support for E9AC24 as seed ortholog is 100%.
Bootstrap support for A3LUD8 as seed ortholog is 100%.

Group of orthologs #1164. Best score 59 bits
Score difference with first non-orthologous sequence - L.major:59 S.stipitis:59

Q4Q582              	100.00%		A3LUD6              	100.00%
Bootstrap support for Q4Q582 as seed ortholog is 100%.
Bootstrap support for A3LUD6 as seed ortholog is 100%.

Group of orthologs #1165. Best score 59 bits
Score difference with first non-orthologous sequence - L.major:59 S.stipitis:59

Q4QFM6              	100.00%		A3LN96              	100.00%
Bootstrap support for Q4QFM6 as seed ortholog is 100%.
Bootstrap support for A3LN96 as seed ortholog is 100%.

Group of orthologs #1166. Best score 59 bits
Score difference with first non-orthologous sequence - L.major:59 S.stipitis:59

Q4QEW7              	100.00%		A3LPT0              	100.00%
Bootstrap support for Q4QEW7 as seed ortholog is 100%.
Bootstrap support for A3LPT0 as seed ortholog is 100%.

Group of orthologs #1167. Best score 59 bits
Score difference with first non-orthologous sequence - L.major:59 S.stipitis:59

Q4Q8Q8              	100.00%		A3LYD6              	100.00%
Bootstrap support for Q4Q8Q8 as seed ortholog is 100%.
Bootstrap support for A3LYD6 as seed ortholog is 100%.

Group of orthologs #1168. Best score 59 bits
Score difference with first non-orthologous sequence - L.major:59 S.stipitis:59

Q4QI41              	100.00%		A3LSW2              	100.00%
Bootstrap support for Q4QI41 as seed ortholog is 100%.
Bootstrap support for A3LSW2 as seed ortholog is 100%.

Group of orthologs #1169. Best score 58 bits
Score difference with first non-orthologous sequence - L.major:58 S.stipitis:58

Q9BHE9              	100.00%		A3LV69              	100.00%
                    	       		A3GGA9              	58.64%
Bootstrap support for Q9BHE9 as seed ortholog is 100%.
Bootstrap support for A3LV69 as seed ortholog is 100%.

Group of orthologs #1170. Best score 58 bits
Score difference with first non-orthologous sequence - L.major:58 S.stipitis:58

E9AFL8              	100.00%		A3GGT1              	100.00%
Bootstrap support for E9AFL8 as seed ortholog is 100%.
Bootstrap support for A3GGT1 as seed ortholog is 100%.

Group of orthologs #1171. Best score 58 bits
Score difference with first non-orthologous sequence - L.major:58 S.stipitis:58

Q4Q270              	100.00%		A3GH49              	100.00%
Bootstrap support for Q4Q270 as seed ortholog is 100%.
Bootstrap support for A3GH49 as seed ortholog is 100%.

Group of orthologs #1172. Best score 58 bits
Score difference with first non-orthologous sequence - L.major:58 S.stipitis:58

Q4Q6S8              	100.00%		A3GIB3              	100.00%
Bootstrap support for Q4Q6S8 as seed ortholog is 100%.
Bootstrap support for A3GIB3 as seed ortholog is 100%.

Group of orthologs #1173. Best score 58 bits
Score difference with first non-orthologous sequence - L.major:58 S.stipitis:58

Q4Q8X0              	100.00%		A3LMZ0              	100.00%
Bootstrap support for Q4Q8X0 as seed ortholog is 100%.
Bootstrap support for A3LMZ0 as seed ortholog is 100%.

Group of orthologs #1174. Best score 58 bits
Score difference with first non-orthologous sequence - L.major:58 S.stipitis:58

Q4Q9Z1              	100.00%		A3LTC4              	100.00%
Bootstrap support for Q4Q9Z1 as seed ortholog is 100%.
Bootstrap support for A3LTC4 as seed ortholog is 100%.

Group of orthologs #1175. Best score 58 bits
Score difference with first non-orthologous sequence - L.major:58 S.stipitis:58

Q4QH58              	100.00%		A3LMW2              	100.00%
Bootstrap support for Q4QH58 as seed ortholog is 100%.
Bootstrap support for A3LMW2 as seed ortholog is 100%.

Group of orthologs #1176. Best score 57 bits
Score difference with first non-orthologous sequence - L.major:57 S.stipitis:57

Q4Q0A1              	100.00%		A3GGL9              	100.00%
                    	       		A3LVQ9              	35.38%
Bootstrap support for Q4Q0A1 as seed ortholog is 100%.
Bootstrap support for A3GGL9 as seed ortholog is 100%.

Group of orthologs #1177. Best score 57 bits
Score difference with first non-orthologous sequence - L.major:57 S.stipitis:57

Q4QD87              	100.00%		A3LYB1              	100.00%
Q4QD86              	20.42%		
Bootstrap support for Q4QD87 as seed ortholog is 100%.
Bootstrap support for A3LYB1 as seed ortholog is 100%.

Group of orthologs #1178. Best score 57 bits
Score difference with first non-orthologous sequence - L.major:57 S.stipitis:57

Q4Q435              	100.00%		A3LQI8              	100.00%
Bootstrap support for Q4Q435 as seed ortholog is 100%.
Bootstrap support for A3LQI8 as seed ortholog is 100%.

Group of orthologs #1179. Best score 57 bits
Score difference with first non-orthologous sequence - L.major:57 S.stipitis:57

Q4QAW4              	100.00%		A3LW62              	100.00%
Bootstrap support for Q4QAW4 as seed ortholog is 100%.
Bootstrap support for A3LW62 as seed ortholog is 100%.

Group of orthologs #1180. Best score 56 bits
Score difference with first non-orthologous sequence - L.major:56 S.stipitis:56

E9AC39              	100.00%		A3M014              	100.00%
                    	       		A3LRY0              	58.55%
Bootstrap support for E9AC39 as seed ortholog is 100%.
Bootstrap support for A3M014 as seed ortholog is 100%.

Group of orthologs #1181. Best score 56 bits
Score difference with first non-orthologous sequence - L.major:56 S.stipitis:56

Q4QCL2              	100.00%		A3LVJ7              	100.00%
Q4Q9C5              	10.62%		
Bootstrap support for Q4QCL2 as seed ortholog is 100%.
Bootstrap support for A3LVJ7 as seed ortholog is 100%.

Group of orthologs #1182. Best score 56 bits
Score difference with first non-orthologous sequence - L.major:56 S.stipitis:56

Q4Q6E9              	100.00%		A3LRT0              	100.00%
Bootstrap support for Q4Q6E9 as seed ortholog is 100%.
Bootstrap support for A3LRT0 as seed ortholog is 100%.

Group of orthologs #1183. Best score 56 bits
Score difference with first non-orthologous sequence - L.major:56 S.stipitis:56

Q4QHV7              	100.00%		A3GFN1              	100.00%
Bootstrap support for Q4QHV7 as seed ortholog is 100%.
Bootstrap support for A3GFN1 as seed ortholog is 100%.

Group of orthologs #1184. Best score 56 bits
Score difference with first non-orthologous sequence - L.major:56 S.stipitis:56

Q9GRP9              	100.00%		A3LQ73              	100.00%
Bootstrap support for Q9GRP9 as seed ortholog is 100%.
Bootstrap support for A3LQ73 as seed ortholog is 100%.

Group of orthologs #1185. Best score 56 bits
Score difference with first non-orthologous sequence - L.major:56 S.stipitis:56

Q7K9G0              	100.00%		A3LW68              	100.00%
Bootstrap support for Q7K9G0 as seed ortholog is 100%.
Bootstrap support for A3LW68 as seed ortholog is 100%.

Group of orthologs #1186. Best score 55 bits
Score difference with first non-orthologous sequence - L.major:55 S.stipitis:55

Q4Q1J3              	100.00%		A3GHN1              	100.00%
                    	       		A3GEW7              	6.22%
Bootstrap support for Q4Q1J3 as seed ortholog is 100%.
Bootstrap support for A3GHN1 as seed ortholog is 100%.

Group of orthologs #1187. Best score 55 bits
Score difference with first non-orthologous sequence - L.major:55 S.stipitis:55

E9ACE0              	100.00%		A3LZS2              	100.00%
Bootstrap support for E9ACE0 as seed ortholog is 100%.
Bootstrap support for A3LZS2 as seed ortholog is 100%.

Group of orthologs #1188. Best score 55 bits
Score difference with first non-orthologous sequence - L.major:55 S.stipitis:55

E9AEJ8              	100.00%		A3LXV2              	100.00%
Bootstrap support for E9AEJ8 as seed ortholog is 100%.
Bootstrap support for A3LXV2 as seed ortholog is 100%.

Group of orthologs #1189. Best score 55 bits
Score difference with first non-orthologous sequence - L.major:55 S.stipitis:55

Q4QI70              	100.00%		A3M0I5              	100.00%
Bootstrap support for Q4QI70 as seed ortholog is 100%.
Bootstrap support for A3M0I5 as seed ortholog is 100%.

Group of orthologs #1190. Best score 54 bits
Score difference with first non-orthologous sequence - L.major:54 S.stipitis:54

E9ADU0              	100.00%		A3LPR6              	100.00%
Bootstrap support for E9ADU0 as seed ortholog is 100%.
Bootstrap support for A3LPR6 as seed ortholog is 100%.

Group of orthologs #1191. Best score 54 bits
Score difference with first non-orthologous sequence - L.major:54 S.stipitis:54

Q19R45              	100.00%		A3LXR4              	100.00%
Bootstrap support for Q19R45 as seed ortholog is 100%.
Bootstrap support for A3LXR4 as seed ortholog is 100%.

Group of orthologs #1192. Best score 54 bits
Score difference with first non-orthologous sequence - L.major:54 S.stipitis:54

Q4QE50              	100.00%		A3LUV9              	100.00%
Bootstrap support for Q4QE50 as seed ortholog is 100%.
Bootstrap support for A3LUV9 as seed ortholog is 100%.

Group of orthologs #1193. Best score 54 bits
Score difference with first non-orthologous sequence - L.major:54 S.stipitis:54

Q4QGA2              	100.00%		A3LUA1              	100.00%
Bootstrap support for Q4QGA2 as seed ortholog is 100%.
Bootstrap support for A3LUA1 as seed ortholog is 100%.

Group of orthologs #1194. Best score 53 bits
Score difference with first non-orthologous sequence - L.major:53 S.stipitis:53

Q4QBT0              	100.00%		A3GFT9              	100.00%
Bootstrap support for Q4QBT0 as seed ortholog is 100%.
Bootstrap support for A3GFT9 as seed ortholog is 100%.

Group of orthologs #1195. Best score 52 bits
Score difference with first non-orthologous sequence - L.major:52 S.stipitis:52

Q4Q4X3              	100.00%		A3GGK6              	100.00%
Bootstrap support for Q4Q4X3 as seed ortholog is 100%.
Bootstrap support for A3GGK6 as seed ortholog is 100%.

Group of orthologs #1196. Best score 52 bits
Score difference with first non-orthologous sequence - L.major:2 S.stipitis:52

Q4Q2T5              	100.00%		A3LSE8              	100.00%
Bootstrap support for Q4Q2T5 as seed ortholog is 53%.
Alternative seed ortholog is Q4QED2 (2 bits away from this cluster)
Bootstrap support for A3LSE8 as seed ortholog is 100%.

Group of orthologs #1197. Best score 52 bits
Score difference with first non-orthologous sequence - L.major:52 S.stipitis:52

Q4QI35              	100.00%		A3LVX0              	100.00%
Bootstrap support for Q4QI35 as seed ortholog is 100%.
Bootstrap support for A3LVX0 as seed ortholog is 100%.

Group of orthologs #1198. Best score 51 bits
Score difference with first non-orthologous sequence - L.major:51 S.stipitis:51

E9AFB2              	100.00%		A3LNV5              	100.00%
Bootstrap support for E9AFB2 as seed ortholog is 100%.
Bootstrap support for A3LNV5 as seed ortholog is 100%.

Group of orthologs #1199. Best score 51 bits
Score difference with first non-orthologous sequence - L.major:51 S.stipitis:51

Q4Q2I9              	100.00%		A3LY40              	100.00%
Bootstrap support for Q4Q2I9 as seed ortholog is 100%.
Bootstrap support for A3LY40 as seed ortholog is 100%.

Group of orthologs #1200. Best score 50 bits
Score difference with first non-orthologous sequence - L.major:50 S.stipitis:50

Q4Q768              	100.00%		A3GG06              	100.00%
                    	       		A3LSH1              	21.14%
Bootstrap support for Q4Q768 as seed ortholog is 100%.
Bootstrap support for A3GG06 as seed ortholog is 100%.

Group of orthologs #1201. Best score 50 bits
Score difference with first non-orthologous sequence - L.major:50 S.stipitis:50

Q4Q0P5              	100.00%		A3LU01              	100.00%
Bootstrap support for Q4Q0P5 as seed ortholog is 100%.
Bootstrap support for A3LU01 as seed ortholog is 100%.

Group of orthologs #1202. Best score 50 bits
Score difference with first non-orthologous sequence - L.major:50 S.stipitis:50

Q4QEZ1              	100.00%		A3GFM7              	100.00%
Bootstrap support for Q4QEZ1 as seed ortholog is 100%.
Bootstrap support for A3GFM7 as seed ortholog is 100%.

Group of orthologs #1203. Best score 50 bits
Score difference with first non-orthologous sequence - L.major:4 S.stipitis:50

Q4Q5H5              	100.00%		A3LVG0              	100.00%
Bootstrap support for Q4Q5H5 as seed ortholog is 56%.
Alternative seed ortholog is Q4Q9J1 (4 bits away from this cluster)
Bootstrap support for A3LVG0 as seed ortholog is 100%.

Group of orthologs #1204. Best score 50 bits
Score difference with first non-orthologous sequence - L.major:50 S.stipitis:50

Q4Q110              	100.00%		A3LZK9              	100.00%
Bootstrap support for Q4Q110 as seed ortholog is 100%.
Bootstrap support for A3LZK9 as seed ortholog is 100%.

Group of orthologs #1205. Best score 50 bits
Score difference with first non-orthologous sequence - L.major:50 S.stipitis:50

Q4QDP0              	100.00%		A3LMT9              	100.00%
Bootstrap support for Q4QDP0 as seed ortholog is 100%.
Bootstrap support for A3LMT9 as seed ortholog is 100%.

Group of orthologs #1206. Best score 50 bits
Score difference with first non-orthologous sequence - L.major:50 S.stipitis:50

Q9N857              	100.00%		A3GFJ8              	100.00%
Bootstrap support for Q9N857 as seed ortholog is 100%.
Bootstrap support for A3GFJ8 as seed ortholog is 100%.

Group of orthologs #1207. Best score 50 bits
Score difference with first non-orthologous sequence - L.major:50 S.stipitis:50

Q4QGW4              	100.00%		A3LSE2              	100.00%
Bootstrap support for Q4QGW4 as seed ortholog is 100%.
Bootstrap support for A3LSE2 as seed ortholog is 100%.

Group of orthologs #1208. Best score 50 bits
Score difference with first non-orthologous sequence - L.major:50 S.stipitis:50

Q4QBZ9              	100.00%		A3M020              	100.00%
Bootstrap support for Q4QBZ9 as seed ortholog is 100%.
Bootstrap support for A3M020 as seed ortholog is 100%.

Group of orthologs #1209. Best score 50 bits
Score difference with first non-orthologous sequence - L.major:50 S.stipitis:50

Q4QE43              	100.00%		A3LYF6              	100.00%
Bootstrap support for Q4QE43 as seed ortholog is 100%.
Bootstrap support for A3LYF6 as seed ortholog is 100%.

Group of orthologs #1210. Best score 49 bits
Score difference with first non-orthologous sequence - L.major:49 S.stipitis:49

E9AF74              	100.00%		A3LNC7              	100.00%
Bootstrap support for E9AF74 as seed ortholog is 100%.
Bootstrap support for A3LNC7 as seed ortholog is 100%.

Group of orthologs #1211. Best score 49 bits
Score difference with first non-orthologous sequence - L.major:49 S.stipitis:49

Q4Q5R8              	100.00%		A3GF33              	100.00%
Bootstrap support for Q4Q5R8 as seed ortholog is 100%.
Bootstrap support for A3GF33 as seed ortholog is 100%.

Group of orthologs #1212. Best score 49 bits
Score difference with first non-orthologous sequence - L.major:49 S.stipitis:49

Q4Q5N7              	100.00%		A3GFU0              	100.00%
Bootstrap support for Q4Q5N7 as seed ortholog is 100%.
Bootstrap support for A3GFU0 as seed ortholog is 100%.

Group of orthologs #1213. Best score 49 bits
Score difference with first non-orthologous sequence - L.major:49 S.stipitis:49

Q4Q9V3              	100.00%		A3GGD4              	100.00%
Bootstrap support for Q4Q9V3 as seed ortholog is 100%.
Bootstrap support for A3GGD4 as seed ortholog is 100%.

Group of orthologs #1214. Best score 49 bits
Score difference with first non-orthologous sequence - L.major:49 S.stipitis:49

Q4QA79              	100.00%		A3GHD1              	100.00%
Bootstrap support for Q4QA79 as seed ortholog is 100%.
Bootstrap support for A3GHD1 as seed ortholog is 100%.

Group of orthologs #1215. Best score 48 bits
Score difference with first non-orthologous sequence - L.major:48 S.stipitis:48

Q4Q503              	100.00%		A3LR64              	100.00%
Bootstrap support for Q4Q503 as seed ortholog is 100%.
Bootstrap support for A3LR64 as seed ortholog is 100%.

Group of orthologs #1216. Best score 48 bits
Score difference with first non-orthologous sequence - L.major:48 S.stipitis:48

Q4QED6              	100.00%		A3LY81              	100.00%
Bootstrap support for Q4QED6 as seed ortholog is 100%.
Bootstrap support for A3LY81 as seed ortholog is 100%.

Group of orthologs #1217. Best score 48 bits
Score difference with first non-orthologous sequence - L.major:48 S.stipitis:48

Q4QFI7              	100.00%		A3LYW4              	100.00%
Bootstrap support for Q4QFI7 as seed ortholog is 100%.
Bootstrap support for A3LYW4 as seed ortholog is 100%.

Group of orthologs #1218. Best score 47 bits
Score difference with first non-orthologous sequence - L.major:47 S.stipitis:47

Q4QCQ8              	100.00%		A3GI20              	100.00%
Q4QCQ9              	100.00%		
Q4QJ74              	17.06%		
Bootstrap support for Q4QCQ8 as seed ortholog is 100%.
Bootstrap support for Q4QCQ9 as seed ortholog is 100%.
Bootstrap support for A3GI20 as seed ortholog is 100%.

Group of orthologs #1219. Best score 47 bits
Score difference with first non-orthologous sequence - L.major:47 S.stipitis:47

E9ACG0              	100.00%		A3M098              	100.00%
Bootstrap support for E9ACG0 as seed ortholog is 100%.
Bootstrap support for A3M098 as seed ortholog is 100%.

Group of orthologs #1220. Best score 46 bits
Score difference with first non-orthologous sequence - L.major:46 S.stipitis:46

Q4QBW9              	100.00%		A3GGM9              	100.00%
                    	       		A3GG97              	9.22%
Bootstrap support for Q4QBW9 as seed ortholog is 100%.
Bootstrap support for A3GGM9 as seed ortholog is 100%.

Group of orthologs #1221. Best score 46 bits
Score difference with first non-orthologous sequence - L.major:46 S.stipitis:46

Q4Q7Y6              	100.00%		A3LV76              	100.00%
Bootstrap support for Q4Q7Y6 as seed ortholog is 100%.
Bootstrap support for A3LV76 as seed ortholog is 100%.

Group of orthologs #1222. Best score 46 bits
Score difference with first non-orthologous sequence - L.major:46 S.stipitis:46

Q4QGU2              	100.00%		A3LN93              	100.00%
Bootstrap support for Q4QGU2 as seed ortholog is 100%.
Bootstrap support for A3LN93 as seed ortholog is 100%.

Group of orthologs #1223. Best score 46 bits
Score difference with first non-orthologous sequence - L.major:46 S.stipitis:46

Q4QH76              	100.00%		A3LQD1              	100.00%
Bootstrap support for Q4QH76 as seed ortholog is 100%.
Bootstrap support for A3LQD1 as seed ortholog is 100%.

Group of orthologs #1224. Best score 45 bits
Score difference with first non-orthologous sequence - L.major:45 S.stipitis:45

Q4Q8T0              	100.00%		A3LSF2              	100.00%
                    	       		A3LPN1              	11.90%
                    	       		A3LSP6              	10.90%
                    	       		A3LZW9              	10.66%
Bootstrap support for Q4Q8T0 as seed ortholog is 100%.
Bootstrap support for A3LSF2 as seed ortholog is 100%.

Group of orthologs #1225. Best score 45 bits
Score difference with first non-orthologous sequence - L.major:45 S.stipitis:45

Q4Q0C2              	100.00%		A3LQ94              	100.00%
Bootstrap support for Q4Q0C2 as seed ortholog is 100%.
Bootstrap support for A3LQ94 as seed ortholog is 100%.

Group of orthologs #1226. Best score 45 bits
Score difference with first non-orthologous sequence - L.major:45 S.stipitis:45

Q4QF16              	100.00%		A3LN14              	100.00%
Bootstrap support for Q4QF16 as seed ortholog is 100%.
Bootstrap support for A3LN14 as seed ortholog is 100%.

Group of orthologs #1227. Best score 45 bits
Score difference with first non-orthologous sequence - L.major:45 S.stipitis:45

Q4Q9R9              	100.00%		A3LYA5              	100.00%
Bootstrap support for Q4Q9R9 as seed ortholog is 100%.
Bootstrap support for A3LYA5 as seed ortholog is 100%.

Group of orthologs #1228. Best score 45 bits
Score difference with first non-orthologous sequence - L.major:45 S.stipitis:45

Q4QF28              	100.00%		A3LWI1              	100.00%
Bootstrap support for Q4QF28 as seed ortholog is 100%.
Bootstrap support for A3LWI1 as seed ortholog is 100%.

Group of orthologs #1229. Best score 44 bits
Score difference with first non-orthologous sequence - L.major:44 S.stipitis:44

Q4Q138              	100.00%		A3GHR2              	100.00%
Bootstrap support for Q4Q138 as seed ortholog is 100%.
Bootstrap support for A3GHR2 as seed ortholog is 100%.

Group of orthologs #1230. Best score 44 bits
Score difference with first non-orthologous sequence - L.major:44 S.stipitis:44

Q4Q8K2              	100.00%		A3LPD6              	100.00%
Bootstrap support for Q4Q8K2 as seed ortholog is 100%.
Bootstrap support for A3LPD6 as seed ortholog is 100%.

Group of orthologs #1231. Best score 44 bits
Score difference with first non-orthologous sequence - L.major:44 S.stipitis:44

Q4Q9M0              	100.00%		A3LNJ3              	100.00%
Bootstrap support for Q4Q9M0 as seed ortholog is 100%.
Bootstrap support for A3LNJ3 as seed ortholog is 100%.

Group of orthologs #1232. Best score 44 bits
Score difference with first non-orthologous sequence - L.major:44 S.stipitis:44

Q95Z88              	100.00%		A3LW39              	100.00%
Bootstrap support for Q95Z88 as seed ortholog is 100%.
Bootstrap support for A3LW39 as seed ortholog is 100%.

Group of orthologs #1233. Best score 43 bits
Score difference with first non-orthologous sequence - L.major:43 S.stipitis:43

E9AE88              	100.00%		A3GIA9              	100.00%
Bootstrap support for E9AE88 as seed ortholog is 100%.
Bootstrap support for A3GIA9 as seed ortholog is 100%.

Group of orthologs #1234. Best score 43 bits
Score difference with first non-orthologous sequence - L.major:43 S.stipitis:43

Q4Q7D8              	100.00%		A3LPJ1              	100.00%
Bootstrap support for Q4Q7D8 as seed ortholog is 100%.
Bootstrap support for A3LPJ1 as seed ortholog is 100%.

Group of orthologs #1235. Best score 43 bits
Score difference with first non-orthologous sequence - L.major:43 S.stipitis:43

Q4QAD9              	100.00%		A3LUJ4              	100.00%
Bootstrap support for Q4QAD9 as seed ortholog is 100%.
Bootstrap support for A3LUJ4 as seed ortholog is 100%.

Group of orthologs #1236. Best score 42 bits
Score difference with first non-orthologous sequence - L.major:42 S.stipitis:42

Q4Q3X5              	100.00%		A3LR43              	100.00%
Bootstrap support for Q4Q3X5 as seed ortholog is 100%.
Bootstrap support for A3LR43 as seed ortholog is 100%.

Group of orthologs #1237. Best score 42 bits
Score difference with first non-orthologous sequence - L.major:42 S.stipitis:42

Q4Q3Z5              	100.00%		A3LS36              	100.00%
Bootstrap support for Q4Q3Z5 as seed ortholog is 100%.
Bootstrap support for A3LS36 as seed ortholog is 100%.

Group of orthologs #1238. Best score 42 bits
Score difference with first non-orthologous sequence - L.major:42 S.stipitis:42

Q4Q501              	100.00%		A3LSW9              	100.00%
Bootstrap support for Q4Q501 as seed ortholog is 100%.
Bootstrap support for A3LSW9 as seed ortholog is 100%.

Group of orthologs #1239. Best score 42 bits
Score difference with first non-orthologous sequence - L.major:42 S.stipitis:42

Q4QB38              	100.00%		A3LUE8              	100.00%
Bootstrap support for Q4QB38 as seed ortholog is 100%.
Bootstrap support for A3LUE8 as seed ortholog is 100%.

Group of orthologs #1240. Best score 40 bits
Score difference with first non-orthologous sequence - L.major:40 S.stipitis:40

Q4QAV3              	100.00%		A3GIB0              	100.00%
Q4Q3S3              	10.08%		
Bootstrap support for Q4QAV3 as seed ortholog is 100%.
Bootstrap support for A3GIB0 as seed ortholog is 100%.

Group of orthologs #1241. Best score 40 bits
Score difference with first non-orthologous sequence - L.major:40 S.stipitis:40

Q4QFI4              	100.00%		A3LPJ7              	100.00%
                    	       		A3LXQ5              	9.57%
Bootstrap support for Q4QFI4 as seed ortholog is 100%.
Bootstrap support for A3LPJ7 as seed ortholog is 100%.

Group of orthologs #1242. Best score 40 bits
Score difference with first non-orthologous sequence - L.major:40 S.stipitis:40

Q4QJ62              	100.00%		A3LU03              	100.00%
Bootstrap support for Q4QJ62 as seed ortholog is 100%.
Bootstrap support for A3LU03 as seed ortholog is 100%.