###################################
933 groups of orthologs
1123 in-paralogs from L.major
976 in-paralogs from P.knowlesi
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 2296 bits
Score difference with first non-orthologous sequence - L.major:592 P.knowlesi:1418

Q4Q9Z6              	100.00%		B3L363              	100.00%
Bootstrap support for Q4Q9Z6 as seed ortholog is 99%.
Bootstrap support for B3L363 as seed ortholog is 100%.

Group of orthologs #2. Best score 1951 bits
Score difference with first non-orthologous sequence - L.major:525 P.knowlesi:691

Q4QFY9              	100.00%		B3L1Z2              	100.00%
Bootstrap support for Q4QFY9 as seed ortholog is 99%.
Bootstrap support for B3L1Z2 as seed ortholog is 99%.

Group of orthologs #3. Best score 1678 bits
Score difference with first non-orthologous sequence - L.major:1678 P.knowlesi:1678

E9AFM0              	100.00%		B3KZY4              	100.00%
Bootstrap support for E9AFM0 as seed ortholog is 100%.
Bootstrap support for B3KZY4 as seed ortholog is 100%.

Group of orthologs #4. Best score 1499 bits
Score difference with first non-orthologous sequence - L.major:103 P.knowlesi:685

Q4QBN6              	100.00%		B3KZT8              	100.00%
Bootstrap support for Q4QBN6 as seed ortholog is 82%.
Bootstrap support for B3KZT8 as seed ortholog is 100%.

Group of orthologs #5. Best score 1160 bits
Score difference with first non-orthologous sequence - L.major:1160 P.knowlesi:1160

Q4QEW0              	100.00%		B3LBP4              	100.00%
Bootstrap support for Q4QEW0 as seed ortholog is 100%.
Bootstrap support for B3LBP4 as seed ortholog is 100%.

Group of orthologs #6. Best score 1117 bits
Score difference with first non-orthologous sequence - L.major:1117 P.knowlesi:1117

Q4Q165              	100.00%		B3LBA6              	100.00%
Bootstrap support for Q4Q165 as seed ortholog is 100%.
Bootstrap support for B3LBA6 as seed ortholog is 100%.

Group of orthologs #7. Best score 1067 bits
Score difference with first non-orthologous sequence - L.major:1067 P.knowlesi:1067

Q4QD18              	100.00%		B3LBE9              	100.00%
Bootstrap support for Q4QD18 as seed ortholog is 100%.
Bootstrap support for B3LBE9 as seed ortholog is 100%.

Group of orthologs #8. Best score 1043 bits
Score difference with first non-orthologous sequence - L.major:575 P.knowlesi:300

Q4Q1T9              	100.00%		B3L7L4              	100.00%
Bootstrap support for Q4Q1T9 as seed ortholog is 100%.
Bootstrap support for B3L7L4 as seed ortholog is 100%.

Group of orthologs #9. Best score 1023 bits
Score difference with first non-orthologous sequence - L.major:1023 P.knowlesi:1023

Q4Q600              	100.00%		B3L428              	100.00%
Bootstrap support for Q4Q600 as seed ortholog is 100%.
Bootstrap support for B3L428 as seed ortholog is 100%.

Group of orthologs #10. Best score 1003 bits
Score difference with first non-orthologous sequence - L.major:1003 P.knowlesi:621

Q4Q6P8              	100.00%		B3L0J5              	100.00%
Bootstrap support for Q4Q6P8 as seed ortholog is 100%.
Bootstrap support for B3L0J5 as seed ortholog is 100%.

Group of orthologs #11. Best score 985 bits
Score difference with first non-orthologous sequence - L.major:985 P.knowlesi:817

Q4Q259              	100.00%		B3L9Q6              	100.00%
Bootstrap support for Q4Q259 as seed ortholog is 100%.
Bootstrap support for B3L9Q6 as seed ortholog is 100%.

Group of orthologs #12. Best score 973 bits
Score difference with first non-orthologous sequence - L.major:973 P.knowlesi:576

Q4QD43              	100.00%		B3LB54              	100.00%
Bootstrap support for Q4QD43 as seed ortholog is 100%.
Bootstrap support for B3LB54 as seed ortholog is 100%.

Group of orthologs #13. Best score 971 bits
Score difference with first non-orthologous sequence - L.major:398 P.knowlesi:971

Q4Q836              	100.00%		B3LBF9              	100.00%
Bootstrap support for Q4Q836 as seed ortholog is 100%.
Bootstrap support for B3LBF9 as seed ortholog is 100%.

Group of orthologs #14. Best score 968 bits
Score difference with first non-orthologous sequence - L.major:968 P.knowlesi:968

Q4Q8H8              	100.00%		B3LBC1              	100.00%
Bootstrap support for Q4Q8H8 as seed ortholog is 100%.
Bootstrap support for B3LBC1 as seed ortholog is 100%.

Group of orthologs #15. Best score 953 bits
Score difference with first non-orthologous sequence - L.major:953 P.knowlesi:953

Q4QDZ1              	100.00%		B3L8H8              	100.00%
Bootstrap support for Q4QDZ1 as seed ortholog is 100%.
Bootstrap support for B3L8H8 as seed ortholog is 100%.

Group of orthologs #16. Best score 948 bits
Score difference with first non-orthologous sequence - L.major:190 P.knowlesi:835

Q4Q7Y4              	100.00%		B3L1A4              	100.00%
Bootstrap support for Q4Q7Y4 as seed ortholog is 99%.
Bootstrap support for B3L1A4 as seed ortholog is 100%.

Group of orthologs #17. Best score 907 bits
Score difference with first non-orthologous sequence - L.major:907 P.knowlesi:798

Q4Q0J9              	100.00%		B3L8Q4              	100.00%
Bootstrap support for Q4Q0J9 as seed ortholog is 100%.
Bootstrap support for B3L8Q4 as seed ortholog is 100%.

Group of orthologs #18. Best score 888 bits
Score difference with first non-orthologous sequence - L.major:888 P.knowlesi:888

Q4Q5W1              	100.00%		B3L960              	100.00%
Bootstrap support for Q4Q5W1 as seed ortholog is 100%.
Bootstrap support for B3L960 as seed ortholog is 100%.

Group of orthologs #19. Best score 821 bits
Score difference with first non-orthologous sequence - L.major:821 P.knowlesi:32

Q4QGA4              	100.00%		B3LA26              	100.00%
Bootstrap support for Q4QGA4 as seed ortholog is 100%.
Bootstrap support for B3LA26 as seed ortholog is 85%.

Group of orthologs #20. Best score 815 bits
Score difference with first non-orthologous sequence - L.major:815 P.knowlesi:815

E9AFR3              	100.00%		B3L7A0              	100.00%
Bootstrap support for E9AFR3 as seed ortholog is 100%.
Bootstrap support for B3L7A0 as seed ortholog is 100%.

Group of orthologs #21. Best score 812 bits
Score difference with first non-orthologous sequence - L.major:608 P.knowlesi:812

Q4Q418              	100.00%		B3L1S9              	100.00%
Bootstrap support for Q4Q418 as seed ortholog is 100%.
Bootstrap support for B3L1S9 as seed ortholog is 100%.

Group of orthologs #22. Best score 810 bits
Score difference with first non-orthologous sequence - L.major:810 P.knowlesi:674

Q4Q6X7              	100.00%		B3L9E5              	100.00%
Bootstrap support for Q4Q6X7 as seed ortholog is 100%.
Bootstrap support for B3L9E5 as seed ortholog is 100%.

Group of orthologs #23. Best score 807 bits
Score difference with first non-orthologous sequence - L.major:807 P.knowlesi:807

Q4QBZ6              	100.00%		B3L3M0              	100.00%
Q4Q4C4              	95.10%		
Q4QI42              	93.14%		
Bootstrap support for Q4QBZ6 as seed ortholog is 100%.
Bootstrap support for B3L3M0 as seed ortholog is 100%.

Group of orthologs #24. Best score 805 bits
Score difference with first non-orthologous sequence - L.major:805 P.knowlesi:805

Q4QGC5              	100.00%		B3L347              	100.00%
                    	       		B3L1P1              	73.60%
Bootstrap support for Q4QGC5 as seed ortholog is 100%.
Bootstrap support for B3L347 as seed ortholog is 100%.

Group of orthologs #25. Best score 760 bits
Score difference with first non-orthologous sequence - L.major:101 P.knowlesi:646

Q4Q8E6              	100.00%		B3L2J7              	100.00%
Bootstrap support for Q4Q8E6 as seed ortholog is 99%.
Bootstrap support for B3L2J7 as seed ortholog is 100%.

Group of orthologs #26. Best score 759 bits
Score difference with first non-orthologous sequence - L.major:251 P.knowlesi:759

Q4Q740              	100.00%		B3L5E9              	100.00%
Q4Q744              	98.65%		
Q4Q745              	98.65%		
Q4Q747              	81.66%		
Bootstrap support for Q4Q740 as seed ortholog is 100%.
Bootstrap support for B3L5E9 as seed ortholog is 100%.

Group of orthologs #27. Best score 753 bits
Score difference with first non-orthologous sequence - L.major:753 P.knowlesi:753

Q4Q3H2              	100.00%		B3L8U1              	100.00%
Bootstrap support for Q4Q3H2 as seed ortholog is 100%.
Bootstrap support for B3L8U1 as seed ortholog is 100%.

Group of orthologs #28. Best score 743 bits
Score difference with first non-orthologous sequence - L.major:743 P.knowlesi:743

Q4Q2H7              	100.00%		B3LBT4              	100.00%
Bootstrap support for Q4Q2H7 as seed ortholog is 100%.
Bootstrap support for B3LBT4 as seed ortholog is 100%.

Group of orthologs #29. Best score 719 bits
Score difference with first non-orthologous sequence - L.major:654 P.knowlesi:719

Q4QCE4              	100.00%		B3L6T7              	100.00%
Bootstrap support for Q4QCE4 as seed ortholog is 100%.
Bootstrap support for B3L6T7 as seed ortholog is 100%.

Group of orthologs #30. Best score 717 bits
Score difference with first non-orthologous sequence - L.major:717 P.knowlesi:717

Q4Q1R2              	100.00%		B3LCI5              	100.00%
Bootstrap support for Q4Q1R2 as seed ortholog is 100%.
Bootstrap support for B3LCI5 as seed ortholog is 100%.

Group of orthologs #31. Best score 696 bits
Score difference with first non-orthologous sequence - L.major:21 P.knowlesi:146

E9ADY5              	100.00%		B3L1E0              	100.00%
Bootstrap support for E9ADY5 as seed ortholog is 66%.
Alternative seed ortholog is E9ACE5 (21 bits away from this cluster)
Bootstrap support for B3L1E0 as seed ortholog is 99%.

Group of orthologs #32. Best score 688 bits
Score difference with first non-orthologous sequence - L.major:618 P.knowlesi:688

Q4QAG8              	100.00%		B3L2B2              	100.00%
Bootstrap support for Q4QAG8 as seed ortholog is 100%.
Bootstrap support for B3L2B2 as seed ortholog is 100%.

Group of orthologs #33. Best score 681 bits
Score difference with first non-orthologous sequence - L.major:333 P.knowlesi:322

Q95Z93              	100.00%		B3KZL1              	100.00%
Bootstrap support for Q95Z93 as seed ortholog is 100%.
Bootstrap support for B3KZL1 as seed ortholog is 100%.

Group of orthologs #34. Best score 654 bits
Score difference with first non-orthologous sequence - L.major:424 P.knowlesi:654

Q4QEI9              	100.00%		B3L753              	100.00%
Q4QEI8              	98.81%		
Bootstrap support for Q4QEI9 as seed ortholog is 100%.
Bootstrap support for B3L753 as seed ortholog is 100%.

Group of orthologs #35. Best score 641 bits
Score difference with first non-orthologous sequence - L.major:641 P.knowlesi:641

Q4Q821              	100.00%		B3KZZ1              	100.00%
Bootstrap support for Q4Q821 as seed ortholog is 100%.
Bootstrap support for B3KZZ1 as seed ortholog is 100%.

Group of orthologs #36. Best score 636 bits
Score difference with first non-orthologous sequence - L.major:636 P.knowlesi:636

Q4QBJ3              	100.00%		B3L6U2              	100.00%
Bootstrap support for Q4QBJ3 as seed ortholog is 100%.
Bootstrap support for B3L6U2 as seed ortholog is 100%.

Group of orthologs #37. Best score 634 bits
Score difference with first non-orthologous sequence - L.major:122 P.knowlesi:185

E9AEU3              	100.00%		B3L2J4              	100.00%
Bootstrap support for E9AEU3 as seed ortholog is 98%.
Bootstrap support for B3L2J4 as seed ortholog is 99%.

Group of orthologs #38. Best score 618 bits
Score difference with first non-orthologous sequence - L.major:111 P.knowlesi:240

Q4Q1D7              	100.00%		B3L263              	100.00%
Bootstrap support for Q4Q1D7 as seed ortholog is 99%.
Bootstrap support for B3L263 as seed ortholog is 100%.

Group of orthologs #39. Best score 616 bits
Score difference with first non-orthologous sequence - L.major:616 P.knowlesi:234

Q4Q6E1              	100.00%		B3L9J7              	100.00%
Bootstrap support for Q4Q6E1 as seed ortholog is 100%.
Bootstrap support for B3L9J7 as seed ortholog is 99%.

Group of orthologs #40. Best score 611 bits
Score difference with first non-orthologous sequence - L.major:611 P.knowlesi:143

Q4Q1B9              	100.00%		B3L842              	100.00%
Bootstrap support for Q4Q1B9 as seed ortholog is 100%.
Bootstrap support for B3L842 as seed ortholog is 99%.

Group of orthologs #41. Best score 605 bits
Score difference with first non-orthologous sequence - L.major:605 P.knowlesi:526

E9AFL0              	100.00%		B3L4B5              	100.00%
Bootstrap support for E9AFL0 as seed ortholog is 100%.
Bootstrap support for B3L4B5 as seed ortholog is 100%.

Group of orthologs #42. Best score 603 bits
Score difference with first non-orthologous sequence - L.major:514 P.knowlesi:603

Q4Q5I2              	100.00%		B3L402              	100.00%
Bootstrap support for Q4Q5I2 as seed ortholog is 100%.
Bootstrap support for B3L402 as seed ortholog is 100%.

Group of orthologs #43. Best score 599 bits
Score difference with first non-orthologous sequence - L.major:599 P.knowlesi:599

Q4Q171              	100.00%		B3L184              	100.00%
E9AD65              	5.07%		
Bootstrap support for Q4Q171 as seed ortholog is 100%.
Bootstrap support for B3L184 as seed ortholog is 100%.

Group of orthologs #44. Best score 598 bits
Score difference with first non-orthologous sequence - L.major:598 P.knowlesi:598

Q4Q9X5              	100.00%		B3LD12              	100.00%
Q4Q9X6              	99.52%		
Bootstrap support for Q4Q9X5 as seed ortholog is 100%.
Bootstrap support for B3LD12 as seed ortholog is 100%.

Group of orthologs #45. Best score 593 bits
Score difference with first non-orthologous sequence - L.major:593 P.knowlesi:507

E9ADA4              	100.00%		B3L4C8              	100.00%
Bootstrap support for E9ADA4 as seed ortholog is 100%.
Bootstrap support for B3L4C8 as seed ortholog is 100%.

Group of orthologs #46. Best score 587 bits
Score difference with first non-orthologous sequence - L.major:587 P.knowlesi:587

Q4Q4U5              	100.00%		B3L5D0              	100.00%
Bootstrap support for Q4Q4U5 as seed ortholog is 100%.
Bootstrap support for B3L5D0 as seed ortholog is 100%.

Group of orthologs #47. Best score 585 bits
Score difference with first non-orthologous sequence - L.major:585 P.knowlesi:285

Q4Q2T4              	100.00%		B3L6Z9              	100.00%
Bootstrap support for Q4Q2T4 as seed ortholog is 100%.
Bootstrap support for B3L6Z9 as seed ortholog is 100%.

Group of orthologs #48. Best score 582 bits
Score difference with first non-orthologous sequence - L.major:582 P.knowlesi:582

Q4Q3R1              	100.00%		B3L7Y7              	100.00%
Bootstrap support for Q4Q3R1 as seed ortholog is 100%.
Bootstrap support for B3L7Y7 as seed ortholog is 100%.

Group of orthologs #49. Best score 573 bits
Score difference with first non-orthologous sequence - L.major:573 P.knowlesi:573

E9AEW4              	100.00%		B3L565              	100.00%
Bootstrap support for E9AEW4 as seed ortholog is 100%.
Bootstrap support for B3L565 as seed ortholog is 100%.

Group of orthologs #50. Best score 571 bits
Score difference with first non-orthologous sequence - L.major:464 P.knowlesi:571

Q4QBC0              	100.00%		B3L7C9              	100.00%
Q9U0W1              	80.90%		
Bootstrap support for Q4QBC0 as seed ortholog is 100%.
Bootstrap support for B3L7C9 as seed ortholog is 100%.

Group of orthologs #51. Best score 570 bits
Score difference with first non-orthologous sequence - L.major:395 P.knowlesi:362

E9AEL4              	100.00%		B3L3Z3              	100.00%
Bootstrap support for E9AEL4 as seed ortholog is 100%.
Bootstrap support for B3L3Z3 as seed ortholog is 100%.

Group of orthologs #52. Best score 566 bits
Score difference with first non-orthologous sequence - L.major:354 P.knowlesi:156

Q9U1E8              	100.00%		B3LDA3              	100.00%
                    	       		B3LAP0              	32.82%
Bootstrap support for Q9U1E8 as seed ortholog is 100%.
Bootstrap support for B3LDA3 as seed ortholog is 100%.

Group of orthologs #53. Best score 564 bits
Score difference with first non-orthologous sequence - L.major:181 P.knowlesi:215

Q4Q1M0              	100.00%		B3L3U9              	100.00%
Q4Q1M1              	71.23%		
Q4Q594              	9.00%		
Bootstrap support for Q4Q1M0 as seed ortholog is 100%.
Bootstrap support for B3L3U9 as seed ortholog is 100%.

Group of orthologs #54. Best score 560 bits
Score difference with first non-orthologous sequence - L.major:560 P.knowlesi:560

Q4Q417              	100.00%		B3L4J4              	100.00%
Bootstrap support for Q4Q417 as seed ortholog is 100%.
Bootstrap support for B3L4J4 as seed ortholog is 100%.

Group of orthologs #55. Best score 556 bits
Score difference with first non-orthologous sequence - L.major:556 P.knowlesi:556

Q4QC87              	100.00%		B3L746              	100.00%
Bootstrap support for Q4QC87 as seed ortholog is 100%.
Bootstrap support for B3L746 as seed ortholog is 100%.

Group of orthologs #56. Best score 554 bits
Score difference with first non-orthologous sequence - L.major:278 P.knowlesi:277

Q4QA20              	100.00%		B3LDF3              	100.00%
Bootstrap support for Q4QA20 as seed ortholog is 100%.
Bootstrap support for B3LDF3 as seed ortholog is 100%.

Group of orthologs #57. Best score 551 bits
Score difference with first non-orthologous sequence - L.major:551 P.knowlesi:551

Q4QDS0              	100.00%		B3LCD4              	100.00%
Q4QDS1              	83.82%		
Bootstrap support for Q4QDS0 as seed ortholog is 100%.
Bootstrap support for B3LCD4 as seed ortholog is 100%.

Group of orthologs #58. Best score 551 bits
Score difference with first non-orthologous sequence - L.major:80 P.knowlesi:164

Q4QAM3              	100.00%		B3L6X8              	100.00%
Bootstrap support for Q4QAM3 as seed ortholog is 98%.
Bootstrap support for B3L6X8 as seed ortholog is 99%.

Group of orthologs #59. Best score 549 bits
Score difference with first non-orthologous sequence - L.major:549 P.knowlesi:549

E9AE57              	100.00%		B3L2U4              	100.00%
Q4QAU9              	17.21%		
Bootstrap support for E9AE57 as seed ortholog is 100%.
Bootstrap support for B3L2U4 as seed ortholog is 100%.

Group of orthologs #60. Best score 545 bits
Score difference with first non-orthologous sequence - L.major:545 P.knowlesi:466

Q4QB32              	100.00%		B3LCT4              	100.00%
Bootstrap support for Q4QB32 as seed ortholog is 100%.
Bootstrap support for B3LCT4 as seed ortholog is 100%.

Group of orthologs #61. Best score 544 bits
Score difference with first non-orthologous sequence - L.major:425 P.knowlesi:544

Q4QBU0              	100.00%		B3LBS7              	100.00%
Bootstrap support for Q4QBU0 as seed ortholog is 100%.
Bootstrap support for B3LBS7 as seed ortholog is 100%.

Group of orthologs #62. Best score 542 bits
Score difference with first non-orthologous sequence - L.major:409 P.knowlesi:542

Q4Q0X8              	100.00%		B3LDD0              	100.00%
Bootstrap support for Q4Q0X8 as seed ortholog is 100%.
Bootstrap support for B3LDD0 as seed ortholog is 100%.

Group of orthologs #63. Best score 540 bits
Score difference with first non-orthologous sequence - L.major:397 P.knowlesi:404

Q4QAA2              	100.00%		B3L315              	100.00%
Bootstrap support for Q4QAA2 as seed ortholog is 100%.
Bootstrap support for B3L315 as seed ortholog is 100%.

Group of orthologs #64. Best score 540 bits
Score difference with first non-orthologous sequence - L.major:410 P.knowlesi:540

Q4QG45              	100.00%		B3L3L7              	100.00%
Bootstrap support for Q4QG45 as seed ortholog is 100%.
Bootstrap support for B3L3L7 as seed ortholog is 100%.

Group of orthologs #65. Best score 540 bits
Score difference with first non-orthologous sequence - L.major:540 P.knowlesi:540

Q4QEN2              	100.00%		B3L6H5              	100.00%
Bootstrap support for Q4QEN2 as seed ortholog is 100%.
Bootstrap support for B3L6H5 as seed ortholog is 100%.

Group of orthologs #66. Best score 532 bits
Score difference with first non-orthologous sequence - L.major:532 P.knowlesi:532

Q4QAC4              	100.00%		B3L7U8              	100.00%
Bootstrap support for Q4QAC4 as seed ortholog is 100%.
Bootstrap support for B3L7U8 as seed ortholog is 100%.

Group of orthologs #67. Best score 528 bits
Score difference with first non-orthologous sequence - L.major:528 P.knowlesi:417

Q4Q9Z8              	100.00%		B3KZB0              	100.00%
Bootstrap support for Q4Q9Z8 as seed ortholog is 100%.
Bootstrap support for B3KZB0 as seed ortholog is 100%.

Group of orthologs #68. Best score 528 bits
Score difference with first non-orthologous sequence - L.major:151 P.knowlesi:528

Q4QHT5              	100.00%		B3LCI6              	100.00%
Bootstrap support for Q4QHT5 as seed ortholog is 98%.
Bootstrap support for B3LCI6 as seed ortholog is 100%.

Group of orthologs #69. Best score 527 bits
Score difference with first non-orthologous sequence - L.major:76 P.knowlesi:82

Q4Q4I0              	100.00%		B3LCL1              	100.00%
Q4Q4I6              	100.00%		
Bootstrap support for Q4Q4I0 as seed ortholog is 91%.
Bootstrap support for Q4Q4I6 as seed ortholog is 91%.
Bootstrap support for B3LCL1 as seed ortholog is 93%.

Group of orthologs #70. Best score 526 bits
Score difference with first non-orthologous sequence - L.major:526 P.knowlesi:526

Q4QHI7              	100.00%		B3L8E1              	100.00%
Bootstrap support for Q4QHI7 as seed ortholog is 100%.
Bootstrap support for B3L8E1 as seed ortholog is 100%.

Group of orthologs #71. Best score 523 bits
Score difference with first non-orthologous sequence - L.major:136 P.knowlesi:138

Q4Q1J6              	100.00%		B3L619              	100.00%
Bootstrap support for Q4Q1J6 as seed ortholog is 99%.
Bootstrap support for B3L619 as seed ortholog is 99%.

Group of orthologs #72. Best score 521 bits
Score difference with first non-orthologous sequence - L.major:521 P.knowlesi:521

Q4QGX4              	100.00%		B3L8D7              	100.00%
Bootstrap support for Q4QGX4 as seed ortholog is 100%.
Bootstrap support for B3L8D7 as seed ortholog is 100%.

Group of orthologs #73. Best score 515 bits
Score difference with first non-orthologous sequence - L.major:309 P.knowlesi:174

Q4Q219              	100.00%		B3LCX4              	100.00%
Bootstrap support for Q4Q219 as seed ortholog is 100%.
Bootstrap support for B3LCX4 as seed ortholog is 99%.

Group of orthologs #74. Best score 514 bits
Score difference with first non-orthologous sequence - L.major:381 P.knowlesi:514

Q4QBT5              	100.00%		B3L5B0              	100.00%
Bootstrap support for Q4QBT5 as seed ortholog is 100%.
Bootstrap support for B3L5B0 as seed ortholog is 100%.

Group of orthologs #75. Best score 510 bits
Score difference with first non-orthologous sequence - L.major:510 P.knowlesi:510

Q4Q3L5              	100.00%		B3L369              	100.00%
Bootstrap support for Q4Q3L5 as seed ortholog is 100%.
Bootstrap support for B3L369 as seed ortholog is 100%.

Group of orthologs #76. Best score 500 bits
Score difference with first non-orthologous sequence - L.major:500 P.knowlesi:500

Q4QG44              	100.00%		B3L7I1              	100.00%
Bootstrap support for Q4QG44 as seed ortholog is 100%.
Bootstrap support for B3L7I1 as seed ortholog is 100%.

Group of orthologs #77. Best score 499 bits
Score difference with first non-orthologous sequence - L.major:499 P.knowlesi:499

Q4Q893              	100.00%		B3L997              	100.00%
Bootstrap support for Q4Q893 as seed ortholog is 100%.
Bootstrap support for B3L997 as seed ortholog is 100%.

Group of orthologs #78. Best score 495 bits
Score difference with first non-orthologous sequence - L.major:241 P.knowlesi:239

Q4Q0P3              	100.00%		B3L193              	100.00%
Bootstrap support for Q4Q0P3 as seed ortholog is 100%.
Bootstrap support for B3L193 as seed ortholog is 100%.

Group of orthologs #79. Best score 495 bits
Score difference with first non-orthologous sequence - L.major:371 P.knowlesi:495

Q4QGS2              	100.00%		B3L1F4              	100.00%
Bootstrap support for Q4QGS2 as seed ortholog is 100%.
Bootstrap support for B3L1F4 as seed ortholog is 100%.

Group of orthologs #80. Best score 493 bits
Score difference with first non-orthologous sequence - L.major:493 P.knowlesi:493

Q4QCW5              	100.00%		B3L4H0              	100.00%
Bootstrap support for Q4QCW5 as seed ortholog is 100%.
Bootstrap support for B3L4H0 as seed ortholog is 100%.

Group of orthologs #81. Best score 493 bits
Score difference with first non-orthologous sequence - L.major:77 P.knowlesi:255

Q4Q8K1              	100.00%		B3LAL6              	100.00%
Bootstrap support for Q4Q8K1 as seed ortholog is 99%.
Bootstrap support for B3LAL6 as seed ortholog is 100%.

Group of orthologs #82. Best score 491 bits
Score difference with first non-orthologous sequence - L.major:138 P.knowlesi:353

Q4Q2M2              	100.00%		B3LCM2              	100.00%
Bootstrap support for Q4Q2M2 as seed ortholog is 98%.
Bootstrap support for B3LCM2 as seed ortholog is 100%.

Group of orthologs #83. Best score 488 bits
Score difference with first non-orthologous sequence - L.major:488 P.knowlesi:488

Q4Q7X1              	100.00%		B3LA84              	100.00%
                    	       		B3LAJ5              	17.48%
Bootstrap support for Q4Q7X1 as seed ortholog is 100%.
Bootstrap support for B3LA84 as seed ortholog is 100%.

Group of orthologs #84. Best score 487 bits
Score difference with first non-orthologous sequence - L.major:487 P.knowlesi:487

Q4Q804              	100.00%		B3L4A9              	100.00%
Bootstrap support for Q4Q804 as seed ortholog is 100%.
Bootstrap support for B3L4A9 as seed ortholog is 100%.

Group of orthologs #85. Best score 485 bits
Score difference with first non-orthologous sequence - L.major:485 P.knowlesi:485

Q4QFL8              	100.00%		B3L3V4              	100.00%
Bootstrap support for Q4QFL8 as seed ortholog is 100%.
Bootstrap support for B3L3V4 as seed ortholog is 100%.

Group of orthologs #86. Best score 484 bits
Score difference with first non-orthologous sequence - L.major:484 P.knowlesi:484

E9ADF8              	100.00%		B3L8H1              	100.00%
E9ADF9              	100.00%		
Bootstrap support for E9ADF8 as seed ortholog is 100%.
Bootstrap support for E9ADF9 as seed ortholog is 100%.
Bootstrap support for B3L8H1 as seed ortholog is 100%.

Group of orthologs #87. Best score 484 bits
Score difference with first non-orthologous sequence - L.major:130 P.knowlesi:484

Q4Q0B5              	100.00%		B3L165              	100.00%
Bootstrap support for Q4Q0B5 as seed ortholog is 99%.
Bootstrap support for B3L165 as seed ortholog is 100%.

Group of orthologs #88. Best score 481 bits
Score difference with first non-orthologous sequence - L.major:53 P.knowlesi:257

Q9NF77              	100.00%		B3LCP8              	100.00%
Bootstrap support for Q9NF77 as seed ortholog is 72%.
Alternative seed ortholog is E9AFD0 (53 bits away from this cluster)
Bootstrap support for B3LCP8 as seed ortholog is 99%.

Group of orthologs #89. Best score 473 bits
Score difference with first non-orthologous sequence - L.major:473 P.knowlesi:473

Q4Q6U5              	100.00%		B3LBK2              	100.00%
Bootstrap support for Q4Q6U5 as seed ortholog is 100%.
Bootstrap support for B3LBK2 as seed ortholog is 100%.

Group of orthologs #90. Best score 465 bits
Score difference with first non-orthologous sequence - L.major:331 P.knowlesi:465

E9ACJ9              	100.00%		B3LBM5              	100.00%
Bootstrap support for E9ACJ9 as seed ortholog is 100%.
Bootstrap support for B3LBM5 as seed ortholog is 100%.

Group of orthologs #91. Best score 465 bits
Score difference with first non-orthologous sequence - L.major:465 P.knowlesi:465

Q4QC07              	100.00%		B3LAJ1              	100.00%
Bootstrap support for Q4QC07 as seed ortholog is 100%.
Bootstrap support for B3LAJ1 as seed ortholog is 100%.

Group of orthologs #92. Best score 464 bits
Score difference with first non-orthologous sequence - L.major:464 P.knowlesi:464

Q4QHR7              	100.00%		B3LAR0              	100.00%
Q4QHR6              	24.69%		
Bootstrap support for Q4QHR7 as seed ortholog is 100%.
Bootstrap support for B3LAR0 as seed ortholog is 100%.

Group of orthologs #93. Best score 460 bits
Score difference with first non-orthologous sequence - L.major:460 P.knowlesi:460

Q4Q124              	100.00%		B3L654              	100.00%
Bootstrap support for Q4Q124 as seed ortholog is 100%.
Bootstrap support for B3L654 as seed ortholog is 100%.

Group of orthologs #94. Best score 459 bits
Score difference with first non-orthologous sequence - L.major:459 P.knowlesi:46

Q4Q2J4              	100.00%		B3L4L2              	100.00%
Bootstrap support for Q4Q2J4 as seed ortholog is 100%.
Bootstrap support for B3L4L2 as seed ortholog is 88%.

Group of orthologs #95. Best score 458 bits
Score difference with first non-orthologous sequence - L.major:458 P.knowlesi:458

Q4QFY8              	100.00%		B3L7W9              	100.00%
Bootstrap support for Q4QFY8 as seed ortholog is 100%.
Bootstrap support for B3L7W9 as seed ortholog is 100%.

Group of orthologs #96. Best score 458 bits
Score difference with first non-orthologous sequence - L.major:458 P.knowlesi:458

Q4QJC7              	100.00%		B3L613              	100.00%
Bootstrap support for Q4QJC7 as seed ortholog is 100%.
Bootstrap support for B3L613 as seed ortholog is 100%.

Group of orthologs #97. Best score 457 bits
Score difference with first non-orthologous sequence - L.major:280 P.knowlesi:329

Q4Q6V8              	100.00%		B3L274              	100.00%
Bootstrap support for Q4Q6V8 as seed ortholog is 100%.
Bootstrap support for B3L274 as seed ortholog is 100%.

Group of orthologs #98. Best score 456 bits
Score difference with first non-orthologous sequence - L.major:456 P.knowlesi:456

E9ADL4              	100.00%		B3L0U2              	100.00%
Bootstrap support for E9ADL4 as seed ortholog is 100%.
Bootstrap support for B3L0U2 as seed ortholog is 100%.

Group of orthologs #99. Best score 456 bits
Score difference with first non-orthologous sequence - L.major:456 P.knowlesi:456

Q4Q2Q6              	100.00%		B3L240              	100.00%
Bootstrap support for Q4Q2Q6 as seed ortholog is 100%.
Bootstrap support for B3L240 as seed ortholog is 100%.

Group of orthologs #100. Best score 456 bits
Score difference with first non-orthologous sequence - L.major:456 P.knowlesi:456

Q4Q131              	100.00%		B3LAH4              	100.00%
Bootstrap support for Q4Q131 as seed ortholog is 100%.
Bootstrap support for B3LAH4 as seed ortholog is 100%.

Group of orthologs #101. Best score 453 bits
Score difference with first non-orthologous sequence - L.major:124 P.knowlesi:453

Q4QFF7              	100.00%		B3L892              	100.00%
Bootstrap support for Q4QFF7 as seed ortholog is 99%.
Bootstrap support for B3L892 as seed ortholog is 100%.

Group of orthologs #102. Best score 448 bits
Score difference with first non-orthologous sequence - L.major:35 P.knowlesi:448

Q4QEZ6              	100.00%		B3LCR8              	100.00%
Bootstrap support for Q4QEZ6 as seed ortholog is 79%.
Bootstrap support for B3LCR8 as seed ortholog is 100%.

Group of orthologs #103. Best score 443 bits
Score difference with first non-orthologous sequence - L.major:92 P.knowlesi:49

Q4QG01              	100.00%		B3L419              	100.00%
Bootstrap support for Q4QG01 as seed ortholog is 93%.
Bootstrap support for B3L419 as seed ortholog is 76%.

Group of orthologs #104. Best score 437 bits
Score difference with first non-orthologous sequence - L.major:437 P.knowlesi:437

Q4Q6W5              	100.00%		B3L8A1              	100.00%
Bootstrap support for Q4Q6W5 as seed ortholog is 100%.
Bootstrap support for B3L8A1 as seed ortholog is 100%.

Group of orthologs #105. Best score 435 bits
Score difference with first non-orthologous sequence - L.major:435 P.knowlesi:256

Q4Q078              	100.00%		B3L5Y2              	100.00%
Bootstrap support for Q4Q078 as seed ortholog is 100%.
Bootstrap support for B3L5Y2 as seed ortholog is 100%.

Group of orthologs #106. Best score 435 bits
Score difference with first non-orthologous sequence - L.major:435 P.knowlesi:435

Q4Q6T6              	100.00%		B3L2N9              	100.00%
Bootstrap support for Q4Q6T6 as seed ortholog is 100%.
Bootstrap support for B3L2N9 as seed ortholog is 100%.

Group of orthologs #107. Best score 432 bits
Score difference with first non-orthologous sequence - L.major:432 P.knowlesi:432

Q4Q2B0              	100.00%		B3L7Y9              	100.00%
Bootstrap support for Q4Q2B0 as seed ortholog is 100%.
Bootstrap support for B3L7Y9 as seed ortholog is 100%.

Group of orthologs #108. Best score 431 bits
Score difference with first non-orthologous sequence - L.major:268 P.knowlesi:221

Q4Q8B2              	100.00%		B3L1P5              	100.00%
Bootstrap support for Q4Q8B2 as seed ortholog is 100%.
Bootstrap support for B3L1P5 as seed ortholog is 100%.

Group of orthologs #109. Best score 431 bits
Score difference with first non-orthologous sequence - L.major:95 P.knowlesi:431

Q4Q199              	100.00%		B3L8C2              	100.00%
Bootstrap support for Q4Q199 as seed ortholog is 95%.
Bootstrap support for B3L8C2 as seed ortholog is 100%.

Group of orthologs #110. Best score 431 bits
Score difference with first non-orthologous sequence - L.major:179 P.knowlesi:431

Q4Q826              	100.00%		B3L776              	100.00%
Bootstrap support for Q4Q826 as seed ortholog is 99%.
Bootstrap support for B3L776 as seed ortholog is 100%.

Group of orthologs #111. Best score 431 bits
Score difference with first non-orthologous sequence - L.major:431 P.knowlesi:431

Q4QAR0              	100.00%		B3L9R6              	100.00%
Bootstrap support for Q4QAR0 as seed ortholog is 100%.
Bootstrap support for B3L9R6 as seed ortholog is 100%.

Group of orthologs #112. Best score 427 bits
Score difference with first non-orthologous sequence - L.major:185 P.knowlesi:237

Q4Q8T8              	100.00%		B3KZB9              	100.00%
Bootstrap support for Q4Q8T8 as seed ortholog is 100%.
Bootstrap support for B3KZB9 as seed ortholog is 100%.

Group of orthologs #113. Best score 425 bits
Score difference with first non-orthologous sequence - L.major:425 P.knowlesi:337

Q4QFK2              	100.00%		B3LD11              	100.00%
Q4Q828              	22.75%		
Bootstrap support for Q4QFK2 as seed ortholog is 100%.
Bootstrap support for B3LD11 as seed ortholog is 100%.

Group of orthologs #114. Best score 425 bits
Score difference with first non-orthologous sequence - L.major:250 P.knowlesi:227

O62591              	100.00%		B3L971              	100.00%
Bootstrap support for O62591 as seed ortholog is 100%.
Bootstrap support for B3L971 as seed ortholog is 100%.

Group of orthologs #115. Best score 423 bits
Score difference with first non-orthologous sequence - L.major:423 P.knowlesi:357

Q4QJG2              	100.00%		B3LC00              	100.00%
Bootstrap support for Q4QJG2 as seed ortholog is 100%.
Bootstrap support for B3LC00 as seed ortholog is 100%.

Group of orthologs #116. Best score 422 bits
Score difference with first non-orthologous sequence - L.major:422 P.knowlesi:247

Q4Q3A6              	100.00%		B3L633              	100.00%
Q4Q8S4              	31.45%		
Bootstrap support for Q4Q3A6 as seed ortholog is 100%.
Bootstrap support for B3L633 as seed ortholog is 99%.

Group of orthologs #117. Best score 422 bits
Score difference with first non-orthologous sequence - L.major:422 P.knowlesi:248

Q4QII2              	100.00%		B3KZR4              	100.00%
Bootstrap support for Q4QII2 as seed ortholog is 100%.
Bootstrap support for B3KZR4 as seed ortholog is 99%.

Group of orthologs #118. Best score 422 bits
Score difference with first non-orthologous sequence - L.major:422 P.knowlesi:422

Q4QC62              	100.00%		B3L6H8              	100.00%
Bootstrap support for Q4QC62 as seed ortholog is 100%.
Bootstrap support for B3L6H8 as seed ortholog is 100%.

Group of orthologs #119. Best score 415 bits
Score difference with first non-orthologous sequence - L.major:93 P.knowlesi:41

Q4Q1E9              	100.00%		B3L9B1              	100.00%
Bootstrap support for Q4Q1E9 as seed ortholog is 99%.
Bootstrap support for B3L9B1 as seed ortholog is 86%.

Group of orthologs #120. Best score 415 bits
Score difference with first non-orthologous sequence - L.major:415 P.knowlesi:187

Q4Q2K1              	100.00%		B3LA33              	100.00%
Bootstrap support for Q4Q2K1 as seed ortholog is 100%.
Bootstrap support for B3LA33 as seed ortholog is 99%.

Group of orthologs #121. Best score 414 bits
Score difference with first non-orthologous sequence - L.major:414 P.knowlesi:414

Q4Q401              	100.00%		B3L7S4              	100.00%
Bootstrap support for Q4Q401 as seed ortholog is 100%.
Bootstrap support for B3L7S4 as seed ortholog is 100%.

Group of orthologs #122. Best score 413 bits
Score difference with first non-orthologous sequence - L.major:250 P.knowlesi:413

E9AD84              	100.00%		B3KZQ8              	100.00%
Bootstrap support for E9AD84 as seed ortholog is 100%.
Bootstrap support for B3KZQ8 as seed ortholog is 100%.

Group of orthologs #123. Best score 413 bits
Score difference with first non-orthologous sequence - L.major:113 P.knowlesi:294

E9AEZ4              	100.00%		B3L4N6              	100.00%
Bootstrap support for E9AEZ4 as seed ortholog is 99%.
Bootstrap support for B3L4N6 as seed ortholog is 100%.

Group of orthologs #124. Best score 412 bits
Score difference with first non-orthologous sequence - L.major:251 P.knowlesi:412

E9ACV1              	100.00%		B3L0B3              	100.00%
Bootstrap support for E9ACV1 as seed ortholog is 100%.
Bootstrap support for B3L0B3 as seed ortholog is 100%.

Group of orthologs #125. Best score 411 bits
Score difference with first non-orthologous sequence - L.major:120 P.knowlesi:349

Q9NHE1              	100.00%		B3L5H4              	100.00%
Q9NHE2              	11.04%		
Bootstrap support for Q9NHE1 as seed ortholog is 99%.
Bootstrap support for B3L5H4 as seed ortholog is 100%.

Group of orthologs #126. Best score 411 bits
Score difference with first non-orthologous sequence - L.major:170 P.knowlesi:154

Q4Q1K8              	100.00%		B3L9V8              	100.00%
Bootstrap support for Q4Q1K8 as seed ortholog is 99%.
Bootstrap support for B3L9V8 as seed ortholog is 99%.

Group of orthologs #127. Best score 411 bits
Score difference with first non-orthologous sequence - L.major:411 P.knowlesi:411

Q4QCY4              	100.00%		B3LAR4              	100.00%
Bootstrap support for Q4QCY4 as seed ortholog is 100%.
Bootstrap support for B3LAR4 as seed ortholog is 100%.

Group of orthologs #128. Best score 409 bits
Score difference with first non-orthologous sequence - L.major:128 P.knowlesi:236

Q4QI01              	100.00%		B3LBY6              	100.00%
Bootstrap support for Q4QI01 as seed ortholog is 98%.
Bootstrap support for B3LBY6 as seed ortholog is 99%.

Group of orthologs #129. Best score 404 bits
Score difference with first non-orthologous sequence - L.major:53 P.knowlesi:94

Q4Q6J3              	100.00%		B3L4Z9              	100.00%
Bootstrap support for Q4Q6J3 as seed ortholog is 91%.
Bootstrap support for B3L4Z9 as seed ortholog is 98%.

Group of orthologs #130. Best score 401 bits
Score difference with first non-orthologous sequence - L.major:179 P.knowlesi:142

Q4Q5P5              	100.00%		B3LCA3              	100.00%
E9AFD4              	9.04%		
Bootstrap support for Q4Q5P5 as seed ortholog is 99%.
Bootstrap support for B3LCA3 as seed ortholog is 99%.

Group of orthologs #131. Best score 401 bits
Score difference with first non-orthologous sequence - L.major:401 P.knowlesi:401

Q4Q878              	100.00%		B3KZK7              	100.00%
Bootstrap support for Q4Q878 as seed ortholog is 100%.
Bootstrap support for B3KZK7 as seed ortholog is 100%.

Group of orthologs #132. Best score 400 bits
Score difference with first non-orthologous sequence - L.major:164 P.knowlesi:400

Q4QD53              	100.00%		B3L2M5              	100.00%
Bootstrap support for Q4QD53 as seed ortholog is 99%.
Bootstrap support for B3L2M5 as seed ortholog is 100%.

Group of orthologs #133. Best score 398 bits
Score difference with first non-orthologous sequence - L.major:91 P.knowlesi:178

Q4Q1P0              	100.00%		B3L794              	100.00%
Bootstrap support for Q4Q1P0 as seed ortholog is 98%.
Bootstrap support for B3L794 as seed ortholog is 100%.

Group of orthologs #134. Best score 398 bits
Score difference with first non-orthologous sequence - L.major:398 P.knowlesi:398

Q4QCD3              	100.00%		B3L4J0              	100.00%
Bootstrap support for Q4QCD3 as seed ortholog is 100%.
Bootstrap support for B3L4J0 as seed ortholog is 100%.

Group of orthologs #135. Best score 397 bits
Score difference with first non-orthologous sequence - L.major:397 P.knowlesi:249

Q4Q9N1              	100.00%		B3L8B0              	100.00%
Bootstrap support for Q4Q9N1 as seed ortholog is 100%.
Bootstrap support for B3L8B0 as seed ortholog is 100%.

Group of orthologs #136. Best score 393 bits
Score difference with first non-orthologous sequence - L.major:230 P.knowlesi:242

Q4QC38              	100.00%		B3L0Q5              	100.00%
Bootstrap support for Q4QC38 as seed ortholog is 100%.
Bootstrap support for B3L0Q5 as seed ortholog is 100%.

Group of orthologs #137. Best score 391 bits
Score difference with first non-orthologous sequence - L.major:391 P.knowlesi:220

Q4QBL8              	100.00%		B3LAV4              	100.00%
E9ADI5              	81.36%		
Bootstrap support for Q4QBL8 as seed ortholog is 100%.
Bootstrap support for B3LAV4 as seed ortholog is 100%.

Group of orthologs #138. Best score 390 bits
Score difference with first non-orthologous sequence - L.major:390 P.knowlesi:390

O61128              	100.00%		B3L1D8              	100.00%
Bootstrap support for O61128 as seed ortholog is 100%.
Bootstrap support for B3L1D8 as seed ortholog is 100%.

Group of orthologs #139. Best score 389 bits
Score difference with first non-orthologous sequence - L.major:389 P.knowlesi:160

E9AEI0              	100.00%		B3L7D9              	100.00%
E9AEH9              	76.33%		
Bootstrap support for E9AEI0 as seed ortholog is 100%.
Bootstrap support for B3L7D9 as seed ortholog is 99%.

Group of orthologs #140. Best score 389 bits
Score difference with first non-orthologous sequence - L.major:389 P.knowlesi:389

P07382              	100.00%		B3L1J6              	100.00%
Bootstrap support for P07382 as seed ortholog is 100%.
Bootstrap support for B3L1J6 as seed ortholog is 100%.

Group of orthologs #141. Best score 389 bits
Score difference with first non-orthologous sequence - L.major:163 P.knowlesi:295

Q4QAQ7              	100.00%		B3KZB3              	100.00%
Bootstrap support for Q4QAQ7 as seed ortholog is 99%.
Bootstrap support for B3KZB3 as seed ortholog is 100%.

Group of orthologs #142. Best score 389 bits
Score difference with first non-orthologous sequence - L.major:132 P.knowlesi:389

Q9U1E0              	100.00%		B3KZ01              	100.00%
Bootstrap support for Q9U1E0 as seed ortholog is 99%.
Bootstrap support for B3KZ01 as seed ortholog is 100%.

Group of orthologs #143. Best score 383 bits
Score difference with first non-orthologous sequence - L.major:383 P.knowlesi:383

Q4QF36              	100.00%		B3L8R5              	100.00%
Bootstrap support for Q4QF36 as seed ortholog is 100%.
Bootstrap support for B3L8R5 as seed ortholog is 100%.

Group of orthologs #144. Best score 382 bits
Score difference with first non-orthologous sequence - L.major:382 P.knowlesi:214

Q4QE27              	100.00%		B3L769              	100.00%
Bootstrap support for Q4QE27 as seed ortholog is 100%.
Bootstrap support for B3L769 as seed ortholog is 100%.

Group of orthologs #145. Best score 381 bits
Score difference with first non-orthologous sequence - L.major:381 P.knowlesi:381

O61127              	100.00%		B3L4M7              	100.00%
Bootstrap support for O61127 as seed ortholog is 100%.
Bootstrap support for B3L4M7 as seed ortholog is 100%.

Group of orthologs #146. Best score 381 bits
Score difference with first non-orthologous sequence - L.major:138 P.knowlesi:211

Q4QAP2              	100.00%		B3LBA5              	100.00%
Bootstrap support for Q4QAP2 as seed ortholog is 99%.
Bootstrap support for B3LBA5 as seed ortholog is 99%.

Group of orthologs #147. Best score 378 bits
Score difference with first non-orthologous sequence - L.major:106 P.knowlesi:378

E9ADK8              	100.00%		B3L8M2              	100.00%
Bootstrap support for E9ADK8 as seed ortholog is 99%.
Bootstrap support for B3L8M2 as seed ortholog is 100%.

Group of orthologs #148. Best score 378 bits
Score difference with first non-orthologous sequence - L.major:378 P.knowlesi:378

Q4QJF1              	100.00%		B3L0I2              	100.00%
Bootstrap support for Q4QJF1 as seed ortholog is 100%.
Bootstrap support for B3L0I2 as seed ortholog is 100%.

Group of orthologs #149. Best score 376 bits
Score difference with first non-orthologous sequence - L.major:276 P.knowlesi:376

E9AFD2              	100.00%		B3L878              	100.00%
Bootstrap support for E9AFD2 as seed ortholog is 100%.
Bootstrap support for B3L878 as seed ortholog is 100%.

Group of orthologs #150. Best score 376 bits
Score difference with first non-orthologous sequence - L.major:290 P.knowlesi:376

Q4QI58              	100.00%		B3LBF1              	100.00%
Bootstrap support for Q4QI58 as seed ortholog is 100%.
Bootstrap support for B3LBF1 as seed ortholog is 100%.

Group of orthologs #151. Best score 369 bits
Score difference with first non-orthologous sequence - L.major:229 P.knowlesi:369

E9AFS0              	100.00%		B3LB10              	100.00%
E9AFR9              	91.67%		
Bootstrap support for E9AFS0 as seed ortholog is 100%.
Bootstrap support for B3LB10 as seed ortholog is 100%.

Group of orthologs #152. Best score 369 bits
Score difference with first non-orthologous sequence - L.major:369 P.knowlesi:369

Q4Q420              	100.00%		B3L287              	100.00%
Bootstrap support for Q4Q420 as seed ortholog is 100%.
Bootstrap support for B3L287 as seed ortholog is 100%.

Group of orthologs #153. Best score 368 bits
Score difference with first non-orthologous sequence - L.major:99 P.knowlesi:25

Q4Q9W1              	100.00%		B3L2S0              	100.00%
Bootstrap support for Q4Q9W1 as seed ortholog is 99%.
Bootstrap support for B3L2S0 as seed ortholog is 78%.

Group of orthologs #154. Best score 367 bits
Score difference with first non-orthologous sequence - L.major:55 P.knowlesi:9

Q4Q4W8              	100.00%		B3L2U9              	100.00%
Q4Q7Z5              	5.84%		
Bootstrap support for Q4Q4W8 as seed ortholog is 95%.
Bootstrap support for B3L2U9 as seed ortholog is 62%.
Alternative seed ortholog is B3L454 (9 bits away from this cluster)

Group of orthologs #155. Best score 367 bits
Score difference with first non-orthologous sequence - L.major:54 P.knowlesi:170

Q4Q7R2              	100.00%		B3KZP7              	100.00%
Bootstrap support for Q4Q7R2 as seed ortholog is 90%.
Bootstrap support for B3KZP7 as seed ortholog is 99%.

Group of orthologs #156. Best score 366 bits
Score difference with first non-orthologous sequence - L.major:366 P.knowlesi:366

Q4QCC5              	100.00%		B3LBE8              	100.00%
Bootstrap support for Q4QCC5 as seed ortholog is 100%.
Bootstrap support for B3LBE8 as seed ortholog is 100%.

Group of orthologs #157. Best score 364 bits
Score difference with first non-orthologous sequence - L.major:364 P.knowlesi:280

Q4Q555              	100.00%		B3L3G9              	100.00%
Bootstrap support for Q4Q555 as seed ortholog is 100%.
Bootstrap support for B3L3G9 as seed ortholog is 100%.

Group of orthologs #158. Best score 363 bits
Score difference with first non-orthologous sequence - L.major:363 P.knowlesi:363

Q4QFJ8              	100.00%		B3L6F2              	100.00%
Bootstrap support for Q4QFJ8 as seed ortholog is 100%.
Bootstrap support for B3L6F2 as seed ortholog is 100%.

Group of orthologs #159. Best score 359 bits
Score difference with first non-orthologous sequence - L.major:359 P.knowlesi:359

Q4Q063              	100.00%		B3L0L1              	100.00%
Bootstrap support for Q4Q063 as seed ortholog is 100%.
Bootstrap support for B3L0L1 as seed ortholog is 100%.

Group of orthologs #160. Best score 359 bits
Score difference with first non-orthologous sequence - L.major:359 P.knowlesi:359

Q4Q8N7              	100.00%		B3L729              	100.00%
Bootstrap support for Q4Q8N7 as seed ortholog is 100%.
Bootstrap support for B3L729 as seed ortholog is 100%.

Group of orthologs #161. Best score 358 bits
Score difference with first non-orthologous sequence - L.major:191 P.knowlesi:153

Q4Q4U1              	100.00%		B3LCW5              	100.00%
Bootstrap support for Q4Q4U1 as seed ortholog is 99%.
Bootstrap support for B3LCW5 as seed ortholog is 98%.

Group of orthologs #162. Best score 358 bits
Score difference with first non-orthologous sequence - L.major:77 P.knowlesi:358

Q4QFH5              	100.00%		B3L384              	100.00%
Bootstrap support for Q4QFH5 as seed ortholog is 96%.
Bootstrap support for B3L384 as seed ortholog is 100%.

Group of orthologs #163. Best score 356 bits
Score difference with first non-orthologous sequence - L.major:356 P.knowlesi:356

Q4Q5H2              	100.00%		B3L4H1              	100.00%
Bootstrap support for Q4Q5H2 as seed ortholog is 100%.
Bootstrap support for B3L4H1 as seed ortholog is 100%.

Group of orthologs #164. Best score 356 bits
Score difference with first non-orthologous sequence - L.major:254 P.knowlesi:356

Q4QDW8              	100.00%		B3L8S5              	100.00%
Bootstrap support for Q4QDW8 as seed ortholog is 100%.
Bootstrap support for B3L8S5 as seed ortholog is 100%.

Group of orthologs #165. Best score 355 bits
Score difference with first non-orthologous sequence - L.major:355 P.knowlesi:355

Q4QF83              	100.00%		B3KZC7              	100.00%
Bootstrap support for Q4QF83 as seed ortholog is 100%.
Bootstrap support for B3KZC7 as seed ortholog is 100%.

Group of orthologs #166. Best score 353 bits
Score difference with first non-orthologous sequence - L.major:353 P.knowlesi:353

E9AE78              	100.00%		B3LD69              	100.00%
Bootstrap support for E9AE78 as seed ortholog is 100%.
Bootstrap support for B3LD69 as seed ortholog is 100%.

Group of orthologs #167. Best score 352 bits
Score difference with first non-orthologous sequence - L.major:352 P.knowlesi:352

Q4Q5J5              	100.00%		B3KZH9              	100.00%
Bootstrap support for Q4Q5J5 as seed ortholog is 100%.
Bootstrap support for B3KZH9 as seed ortholog is 100%.

Group of orthologs #168. Best score 352 bits
Score difference with first non-orthologous sequence - L.major:352 P.knowlesi:352

Q4QCQ4              	100.00%		B3L5B4              	100.00%
Bootstrap support for Q4QCQ4 as seed ortholog is 100%.
Bootstrap support for B3L5B4 as seed ortholog is 100%.

Group of orthologs #169. Best score 351 bits
Score difference with first non-orthologous sequence - L.major:351 P.knowlesi:351

Q9U0T7              	100.00%		B3L0T5              	100.00%
Bootstrap support for Q9U0T7 as seed ortholog is 100%.
Bootstrap support for B3L0T5 as seed ortholog is 100%.

Group of orthologs #170. Best score 349 bits
Score difference with first non-orthologous sequence - L.major:349 P.knowlesi:18

E9AE82              	100.00%		B3L2D6              	100.00%
Bootstrap support for E9AE82 as seed ortholog is 100%.
Bootstrap support for B3L2D6 as seed ortholog is 57%.
Alternative seed ortholog is B3L5Q9 (18 bits away from this cluster)

Group of orthologs #171. Best score 349 bits
Score difference with first non-orthologous sequence - L.major:349 P.knowlesi:349

E9AEI2              	100.00%		B3L6M4              	100.00%
Bootstrap support for E9AEI2 as seed ortholog is 100%.
Bootstrap support for B3L6M4 as seed ortholog is 100%.

Group of orthologs #172. Best score 349 bits
Score difference with first non-orthologous sequence - L.major:349 P.knowlesi:349

Q4QGN9              	100.00%		B3LBD4              	100.00%
Bootstrap support for Q4QGN9 as seed ortholog is 100%.
Bootstrap support for B3LBD4 as seed ortholog is 100%.

Group of orthologs #173. Best score 347 bits
Score difference with first non-orthologous sequence - L.major:161 P.knowlesi:347

Q4QGW5              	100.00%		B3L538              	100.00%
Bootstrap support for Q4QGW5 as seed ortholog is 99%.
Bootstrap support for B3L538 as seed ortholog is 100%.

Group of orthologs #174. Best score 346 bits
Score difference with first non-orthologous sequence - L.major:114 P.knowlesi:346

E9ACG3              	100.00%		B3L520              	100.00%
Bootstrap support for E9ACG3 as seed ortholog is 97%.
Bootstrap support for B3L520 as seed ortholog is 100%.

Group of orthologs #175. Best score 345 bits
Score difference with first non-orthologous sequence - L.major:345 P.knowlesi:345

Q4Q8L7              	100.00%		B3L7Z8              	100.00%
Bootstrap support for Q4Q8L7 as seed ortholog is 100%.
Bootstrap support for B3L7Z8 as seed ortholog is 100%.

Group of orthologs #176. Best score 343 bits
Score difference with first non-orthologous sequence - L.major:135 P.knowlesi:179

Q4QBN3              	100.00%		B3LBS6              	100.00%
Bootstrap support for Q4QBN3 as seed ortholog is 99%.
Bootstrap support for B3LBS6 as seed ortholog is 99%.

Group of orthologs #177. Best score 343 bits
Score difference with first non-orthologous sequence - L.major:48 P.knowlesi:343

Q4QDL1              	100.00%		B3LAT9              	100.00%
Bootstrap support for Q4QDL1 as seed ortholog is 30%.
Alternative seed ortholog is Q4Q1B2 (48 bits away from this cluster)
Bootstrap support for B3LAT9 as seed ortholog is 100%.

Group of orthologs #178. Best score 342 bits
Score difference with first non-orthologous sequence - L.major:217 P.knowlesi:342

Q4Q4J6              	100.00%		B3LAB7              	100.00%
                    	       		B3KZ15              	25.33%
Bootstrap support for Q4Q4J6 as seed ortholog is 99%.
Bootstrap support for B3LAB7 as seed ortholog is 100%.

Group of orthologs #179. Best score 341 bits
Score difference with first non-orthologous sequence - L.major:341 P.knowlesi:341

Q4Q1C4              	100.00%		B3LA75              	100.00%
Bootstrap support for Q4Q1C4 as seed ortholog is 100%.
Bootstrap support for B3LA75 as seed ortholog is 100%.

Group of orthologs #180. Best score 340 bits
Score difference with first non-orthologous sequence - L.major:37 P.knowlesi:150

Q4QC88              	100.00%		B3L755              	100.00%
Bootstrap support for Q4QC88 as seed ortholog is 88%.
Bootstrap support for B3L755 as seed ortholog is 99%.

Group of orthologs #181. Best score 339 bits
Score difference with first non-orthologous sequence - L.major:30 P.knowlesi:339

E9ADR1              	100.00%		B3L2D7              	100.00%
Bootstrap support for E9ADR1 as seed ortholog is 70%.
Alternative seed ortholog is Q4Q4N0 (30 bits away from this cluster)
Bootstrap support for B3L2D7 as seed ortholog is 100%.

Group of orthologs #182. Best score 339 bits
Score difference with first non-orthologous sequence - L.major:339 P.knowlesi:339

Q4Q6Q4              	100.00%		B3L268              	100.00%
Bootstrap support for Q4Q6Q4 as seed ortholog is 100%.
Bootstrap support for B3L268 as seed ortholog is 100%.

Group of orthologs #183. Best score 338 bits
Score difference with first non-orthologous sequence - L.major:338 P.knowlesi:338

Q4Q9M4              	100.00%		B3L4N7              	100.00%
Bootstrap support for Q4Q9M4 as seed ortholog is 100%.
Bootstrap support for B3L4N7 as seed ortholog is 100%.

Group of orthologs #184. Best score 337 bits
Score difference with first non-orthologous sequence - L.major:337 P.knowlesi:337

Q4QFJ7              	100.00%		B3KZ67              	100.00%
Bootstrap support for Q4QFJ7 as seed ortholog is 100%.
Bootstrap support for B3KZ67 as seed ortholog is 100%.

Group of orthologs #185. Best score 337 bits
Score difference with first non-orthologous sequence - L.major:184 P.knowlesi:221

Q4QJF6              	100.00%		B3LAE9              	100.00%
Bootstrap support for Q4QJF6 as seed ortholog is 99%.
Bootstrap support for B3LAE9 as seed ortholog is 100%.

Group of orthologs #186. Best score 336 bits
Score difference with first non-orthologous sequence - L.major:336 P.knowlesi:336

Q4Q5S8              	100.00%		B3LAN7              	100.00%
Bootstrap support for Q4Q5S8 as seed ortholog is 100%.
Bootstrap support for B3LAN7 as seed ortholog is 100%.

Group of orthologs #187. Best score 334 bits
Score difference with first non-orthologous sequence - L.major:334 P.knowlesi:334

E9ADW5              	100.00%		B3L6J8              	100.00%
Bootstrap support for E9ADW5 as seed ortholog is 100%.
Bootstrap support for B3L6J8 as seed ortholog is 100%.

Group of orthologs #188. Best score 332 bits
Score difference with first non-orthologous sequence - L.major:332 P.knowlesi:126

Q4QDG7              	100.00%		B3L3U6              	100.00%
Bootstrap support for Q4QDG7 as seed ortholog is 100%.
Bootstrap support for B3L3U6 as seed ortholog is 100%.

Group of orthologs #189. Best score 331 bits
Score difference with first non-orthologous sequence - L.major:331 P.knowlesi:331

Q4Q2K0              	100.00%		B3L6G4              	100.00%
Bootstrap support for Q4Q2K0 as seed ortholog is 100%.
Bootstrap support for B3L6G4 as seed ortholog is 100%.

Group of orthologs #190. Best score 331 bits
Score difference with first non-orthologous sequence - L.major:331 P.knowlesi:331

Q4QF42              	100.00%		B3L3M4              	100.00%
Bootstrap support for Q4QF42 as seed ortholog is 100%.
Bootstrap support for B3L3M4 as seed ortholog is 100%.

Group of orthologs #191. Best score 331 bits
Score difference with first non-orthologous sequence - L.major:331 P.knowlesi:331

Q4QHT0              	100.00%		B3LB14              	100.00%
Bootstrap support for Q4QHT0 as seed ortholog is 100%.
Bootstrap support for B3LB14 as seed ortholog is 100%.

Group of orthologs #192. Best score 329 bits
Score difference with first non-orthologous sequence - L.major:329 P.knowlesi:329

Q4QDB1              	100.00%		B3L4J2              	100.00%
Bootstrap support for Q4QDB1 as seed ortholog is 100%.
Bootstrap support for B3L4J2 as seed ortholog is 100%.

Group of orthologs #193. Best score 329 bits
Score difference with first non-orthologous sequence - L.major:329 P.knowlesi:91

Q4QIG1              	100.00%		B3L6I2              	100.00%
Bootstrap support for Q4QIG1 as seed ortholog is 100%.
Bootstrap support for B3L6I2 as seed ortholog is 96%.

Group of orthologs #194. Best score 327 bits
Score difference with first non-orthologous sequence - L.major:327 P.knowlesi:327

Q4QD34              	100.00%		B3L2P2              	100.00%
Q4QD33              	79.80%		
Bootstrap support for Q4QD34 as seed ortholog is 100%.
Bootstrap support for B3L2P2 as seed ortholog is 100%.

Group of orthologs #195. Best score 327 bits
Score difference with first non-orthologous sequence - L.major:327 P.knowlesi:235

Q4FWX5              	100.00%		B3L699              	100.00%
Bootstrap support for Q4FWX5 as seed ortholog is 100%.
Bootstrap support for B3L699 as seed ortholog is 100%.

Group of orthologs #196. Best score 327 bits
Score difference with first non-orthologous sequence - L.major:50 P.knowlesi:327

Q4Q3R6              	100.00%		B3L5Z1              	100.00%
Bootstrap support for Q4Q3R6 as seed ortholog is 83%.
Bootstrap support for B3L5Z1 as seed ortholog is 100%.

Group of orthologs #197. Best score 326 bits
Score difference with first non-orthologous sequence - L.major:243 P.knowlesi:326

Q4Q6Z4              	100.00%		B3L9D3              	100.00%
Q4Q6Z5              	100.00%		
Bootstrap support for Q4Q6Z4 as seed ortholog is 100%.
Bootstrap support for Q4Q6Z5 as seed ortholog is 100%.
Bootstrap support for B3L9D3 as seed ortholog is 100%.

Group of orthologs #198. Best score 326 bits
Score difference with first non-orthologous sequence - L.major:271 P.knowlesi:326

Q4Q2G5              	100.00%		B3L3R5              	100.00%
Bootstrap support for Q4Q2G5 as seed ortholog is 100%.
Bootstrap support for B3L3R5 as seed ortholog is 100%.

Group of orthologs #199. Best score 326 bits
Score difference with first non-orthologous sequence - L.major:326 P.knowlesi:326

Q4Q7J1              	100.00%		B3LC85              	100.00%
Bootstrap support for Q4Q7J1 as seed ortholog is 100%.
Bootstrap support for B3LC85 as seed ortholog is 100%.

Group of orthologs #200. Best score 325 bits
Score difference with first non-orthologous sequence - L.major:325 P.knowlesi:73

Q4QCD2              	100.00%		B3L2B7              	100.00%
Bootstrap support for Q4QCD2 as seed ortholog is 100%.
Bootstrap support for B3L2B7 as seed ortholog is 92%.

Group of orthologs #201. Best score 324 bits
Score difference with first non-orthologous sequence - L.major:324 P.knowlesi:324

Q4Q5J0              	100.00%		B3KZ79              	100.00%
Q4QAY7              	24.42%		
Bootstrap support for Q4Q5J0 as seed ortholog is 100%.
Bootstrap support for B3KZ79 as seed ortholog is 100%.

Group of orthologs #202. Best score 323 bits
Score difference with first non-orthologous sequence - L.major:323 P.knowlesi:323

Q4Q0B8              	100.00%		B3KZ23              	100.00%
Bootstrap support for Q4Q0B8 as seed ortholog is 100%.
Bootstrap support for B3KZ23 as seed ortholog is 100%.

Group of orthologs #203. Best score 323 bits
Score difference with first non-orthologous sequence - L.major:323 P.knowlesi:323

Q4Q3K1              	100.00%		B3L9N1              	100.00%
Bootstrap support for Q4Q3K1 as seed ortholog is 100%.
Bootstrap support for B3L9N1 as seed ortholog is 100%.

Group of orthologs #204. Best score 321 bits
Score difference with first non-orthologous sequence - L.major:321 P.knowlesi:196

Q4FYU7              	100.00%		B3L014              	100.00%
Bootstrap support for Q4FYU7 as seed ortholog is 100%.
Bootstrap support for B3L014 as seed ortholog is 100%.

Group of orthologs #205. Best score 321 bits
Score difference with first non-orthologous sequence - L.major:40 P.knowlesi:110

Q4Q1P5              	100.00%		B3L3A6              	100.00%
Bootstrap support for Q4Q1P5 as seed ortholog is 81%.
Bootstrap support for B3L3A6 as seed ortholog is 89%.

Group of orthologs #206. Best score 316 bits
Score difference with first non-orthologous sequence - L.major:52 P.knowlesi:316

E9AFP3              	100.00%		B3LC95              	100.00%
Bootstrap support for E9AFP3 as seed ortholog is 83%.
Bootstrap support for B3LC95 as seed ortholog is 100%.

Group of orthologs #207. Best score 316 bits
Score difference with first non-orthologous sequence - L.major:316 P.knowlesi:316

Q4QH70              	100.00%		B3L070              	100.00%
Bootstrap support for Q4QH70 as seed ortholog is 100%.
Bootstrap support for B3L070 as seed ortholog is 100%.

Group of orthologs #208. Best score 314 bits
Score difference with first non-orthologous sequence - L.major:116 P.knowlesi:200

E9AFM1              	100.00%		B3L322              	100.00%
Q9GNR4              	100.00%		
Q27687              	27.18%		
Bootstrap support for E9AFM1 as seed ortholog is 99%.
Bootstrap support for Q9GNR4 as seed ortholog is 99%.
Bootstrap support for B3L322 as seed ortholog is 100%.

Group of orthologs #209. Best score 314 bits
Score difference with first non-orthologous sequence - L.major:75 P.knowlesi:228

E9AFX7              	100.00%		B3LCN2              	100.00%
Bootstrap support for E9AFX7 as seed ortholog is 99%.
Bootstrap support for B3LCN2 as seed ortholog is 100%.

Group of orthologs #210. Best score 312 bits
Score difference with first non-orthologous sequence - L.major:312 P.knowlesi:312

Q4QDX3              	100.00%		B3L1Y4              	100.00%
Q4QDX2              	92.19%		
Bootstrap support for Q4QDX3 as seed ortholog is 100%.
Bootstrap support for B3L1Y4 as seed ortholog is 100%.

Group of orthologs #211. Best score 312 bits
Score difference with first non-orthologous sequence - L.major:206 P.knowlesi:211

Q4Q6T0              	100.00%		B3L4H5              	100.00%
Bootstrap support for Q4Q6T0 as seed ortholog is 100%.
Bootstrap support for B3L4H5 as seed ortholog is 100%.

Group of orthologs #212. Best score 306 bits
Score difference with first non-orthologous sequence - L.major:306 P.knowlesi:306

Q4Q161              	100.00%		B3L6V4              	100.00%
Bootstrap support for Q4Q161 as seed ortholog is 100%.
Bootstrap support for B3L6V4 as seed ortholog is 100%.

Group of orthologs #213. Best score 304 bits
Score difference with first non-orthologous sequence - L.major:304 P.knowlesi:304

Q4Q5P0              	100.00%		B3L9U8              	100.00%
Q4QDL5              	100.00%		
Bootstrap support for Q4Q5P0 as seed ortholog is 100%.
Bootstrap support for Q4QDL5 as seed ortholog is 100%.
Bootstrap support for B3L9U8 as seed ortholog is 100%.

Group of orthologs #214. Best score 302 bits
Score difference with first non-orthologous sequence - L.major:68 P.knowlesi:302

E9AEB2              	100.00%		B3L9J0              	100.00%
Bootstrap support for E9AEB2 as seed ortholog is 93%.
Bootstrap support for B3L9J0 as seed ortholog is 100%.

Group of orthologs #215. Best score 302 bits
Score difference with first non-orthologous sequence - L.major:143 P.knowlesi:193

Q4Q822              	100.00%		B3LC21              	100.00%
Bootstrap support for Q4Q822 as seed ortholog is 99%.
Bootstrap support for B3LC21 as seed ortholog is 100%.

Group of orthologs #216. Best score 301 bits
Score difference with first non-orthologous sequence - L.major:125 P.knowlesi:130

E9AEC8              	100.00%		B3LAT1              	100.00%
Bootstrap support for E9AEC8 as seed ortholog is 99%.
Bootstrap support for B3LAT1 as seed ortholog is 99%.

Group of orthologs #217. Best score 299 bits
Score difference with first non-orthologous sequence - L.major:299 P.knowlesi:299

E9ADH8              	100.00%		B3L783              	100.00%
Bootstrap support for E9ADH8 as seed ortholog is 100%.
Bootstrap support for B3L783 as seed ortholog is 100%.

Group of orthologs #218. Best score 299 bits
Score difference with first non-orthologous sequence - L.major:299 P.knowlesi:299

Q4QGR8              	100.00%		B3L3U5              	100.00%
Bootstrap support for Q4QGR8 as seed ortholog is 100%.
Bootstrap support for B3L3U5 as seed ortholog is 100%.

Group of orthologs #219. Best score 298 bits
Score difference with first non-orthologous sequence - L.major:298 P.knowlesi:298

Q9NGR0              	100.00%		B3L9M2              	100.00%
Bootstrap support for Q9NGR0 as seed ortholog is 100%.
Bootstrap support for B3L9M2 as seed ortholog is 100%.

Group of orthologs #220. Best score 295 bits
Score difference with first non-orthologous sequence - L.major:1 P.knowlesi:58

Q4Q4N5              	100.00%		B3L8H3              	100.00%
                    	       		B3L6N3              	14.88%
Bootstrap support for Q4Q4N5 as seed ortholog is 43%.
Alternative seed ortholog is Q4Q3A5 (1 bits away from this cluster)
Bootstrap support for B3L8H3 as seed ortholog is 41%.
Alternative seed ortholog is B3L5K9 (58 bits away from this cluster)

Group of orthologs #221. Best score 295 bits
Score difference with first non-orthologous sequence - L.major:295 P.knowlesi:295

Q4Q1Y7              	100.00%		B3L8Q5              	100.00%
Bootstrap support for Q4Q1Y7 as seed ortholog is 100%.
Bootstrap support for B3L8Q5 as seed ortholog is 100%.

Group of orthologs #222. Best score 295 bits
Score difference with first non-orthologous sequence - L.major:87 P.knowlesi:176

Q4Q2E4              	100.00%		B3L9L0              	100.00%
Bootstrap support for Q4Q2E4 as seed ortholog is 94%.
Bootstrap support for B3L9L0 as seed ortholog is 99%.

Group of orthologs #223. Best score 294 bits
Score difference with first non-orthologous sequence - L.major:100 P.knowlesi:72

Q4Q1N9              	100.00%		B3L0G9              	100.00%
Bootstrap support for Q4Q1N9 as seed ortholog is 99%.
Bootstrap support for B3L0G9 as seed ortholog is 98%.

Group of orthologs #224. Best score 294 bits
Score difference with first non-orthologous sequence - L.major:294 P.knowlesi:294

Q4QDI6              	100.00%		B3L8F2              	100.00%
Bootstrap support for Q4QDI6 as seed ortholog is 100%.
Bootstrap support for B3L8F2 as seed ortholog is 100%.

Group of orthologs #225. Best score 293 bits
Score difference with first non-orthologous sequence - L.major:37 P.knowlesi:293

Q4Q7S3              	100.00%		B3L1X3              	100.00%
Bootstrap support for Q4Q7S3 as seed ortholog is 75%.
Bootstrap support for B3L1X3 as seed ortholog is 100%.

Group of orthologs #226. Best score 293 bits
Score difference with first non-orthologous sequence - L.major:293 P.knowlesi:293

Q4Q800              	100.00%		B3L5Q6              	100.00%
Bootstrap support for Q4Q800 as seed ortholog is 100%.
Bootstrap support for B3L5Q6 as seed ortholog is 100%.

Group of orthologs #227. Best score 292 bits
Score difference with first non-orthologous sequence - L.major:292 P.knowlesi:292

Q4Q0E8              	100.00%		B3L7S7              	100.00%
Bootstrap support for Q4Q0E8 as seed ortholog is 100%.
Bootstrap support for B3L7S7 as seed ortholog is 100%.

Group of orthologs #228. Best score 292 bits
Score difference with first non-orthologous sequence - L.major:292 P.knowlesi:292

O97213              	100.00%		B3LAL7              	100.00%
Bootstrap support for O97213 as seed ortholog is 100%.
Bootstrap support for B3LAL7 as seed ortholog is 100%.

Group of orthologs #229. Best score 288 bits
Score difference with first non-orthologous sequence - L.major:91 P.knowlesi:72

Q4QE15              	100.00%		B3L472              	100.00%
Bootstrap support for Q4QE15 as seed ortholog is 99%.
Bootstrap support for B3L472 as seed ortholog is 99%.

Group of orthologs #230. Best score 285 bits
Score difference with first non-orthologous sequence - L.major:199 P.knowlesi:285

Q4Q8P6              	100.00%		B3L4D2              	100.00%
Bootstrap support for Q4Q8P6 as seed ortholog is 100%.
Bootstrap support for B3L4D2 as seed ortholog is 100%.

Group of orthologs #231. Best score 285 bits
Score difference with first non-orthologous sequence - L.major:42 P.knowlesi:285

Q4QCE7              	100.00%		B3L2S3              	100.00%
Bootstrap support for Q4QCE7 as seed ortholog is 87%.
Bootstrap support for B3L2S3 as seed ortholog is 100%.

Group of orthologs #232. Best score 284 bits
Score difference with first non-orthologous sequence - L.major:284 P.knowlesi:284

Q4QCR1              	100.00%		B3LA93              	100.00%
Bootstrap support for Q4QCR1 as seed ortholog is 100%.
Bootstrap support for B3LA93 as seed ortholog is 100%.

Group of orthologs #233. Best score 283 bits
Score difference with first non-orthologous sequence - L.major:191 P.knowlesi:187

Q4Q9V1              	100.00%		B3L4Y0              	100.00%
Bootstrap support for Q4Q9V1 as seed ortholog is 100%.
Bootstrap support for B3L4Y0 as seed ortholog is 100%.

Group of orthologs #234. Best score 283 bits
Score difference with first non-orthologous sequence - L.major:283 P.knowlesi:202

Q4QIG8              	100.00%		B3L1F8              	100.00%
Bootstrap support for Q4QIG8 as seed ortholog is 100%.
Bootstrap support for B3L1F8 as seed ortholog is 99%.

Group of orthologs #235. Best score 282 bits
Score difference with first non-orthologous sequence - L.major:282 P.knowlesi:282

E9AD32              	100.00%		B3L992              	100.00%
                    	       		B3L1L0              	99.74%
Bootstrap support for E9AD32 as seed ortholog is 100%.
Bootstrap support for B3L992 as seed ortholog is 100%.

Group of orthologs #236. Best score 279 bits
Score difference with first non-orthologous sequence - L.major:279 P.knowlesi:279

Q4Q7G8              	100.00%		B3L1M7              	100.00%
Bootstrap support for Q4Q7G8 as seed ortholog is 100%.
Bootstrap support for B3L1M7 as seed ortholog is 100%.

Group of orthologs #237. Best score 279 bits
Score difference with first non-orthologous sequence - L.major:279 P.knowlesi:181

Q4QHJ7              	100.00%		B3L4Y8              	100.00%
Bootstrap support for Q4QHJ7 as seed ortholog is 100%.
Bootstrap support for B3L4Y8 as seed ortholog is 100%.

Group of orthologs #238. Best score 278 bits
Score difference with first non-orthologous sequence - L.major:278 P.knowlesi:278

Q4QIY2              	100.00%		B3L212              	100.00%
Bootstrap support for Q4QIY2 as seed ortholog is 100%.
Bootstrap support for B3L212 as seed ortholog is 100%.

Group of orthologs #239. Best score 277 bits
Score difference with first non-orthologous sequence - L.major:277 P.knowlesi:277

Q4Q3E2              	100.00%		B3L6T8              	100.00%
Bootstrap support for Q4Q3E2 as seed ortholog is 100%.
Bootstrap support for B3L6T8 as seed ortholog is 100%.

Group of orthologs #240. Best score 277 bits
Score difference with first non-orthologous sequence - L.major:277 P.knowlesi:277

Q4Q6P5              	100.00%		B3L5A2              	100.00%
Bootstrap support for Q4Q6P5 as seed ortholog is 100%.
Bootstrap support for B3L5A2 as seed ortholog is 100%.

Group of orthologs #241. Best score 277 bits
Score difference with first non-orthologous sequence - L.major:167 P.knowlesi:277

Q4QDK0              	100.00%		B3L2D4              	100.00%
Bootstrap support for Q4QDK0 as seed ortholog is 100%.
Bootstrap support for B3L2D4 as seed ortholog is 100%.

Group of orthologs #242. Best score 277 bits
Score difference with first non-orthologous sequence - L.major:193 P.knowlesi:277

Q4QE05              	100.00%		B3L6C5              	100.00%
Bootstrap support for Q4QE05 as seed ortholog is 99%.
Bootstrap support for B3L6C5 as seed ortholog is 100%.

Group of orthologs #243. Best score 276 bits
Score difference with first non-orthologous sequence - L.major:276 P.knowlesi:141

Q4Q2Z6              	100.00%		B3L120              	100.00%
Bootstrap support for Q4Q2Z6 as seed ortholog is 100%.
Bootstrap support for B3L120 as seed ortholog is 99%.

Group of orthologs #244. Best score 276 bits
Score difference with first non-orthologous sequence - L.major:276 P.knowlesi:276

Q4Q1V0              	100.00%		B3L9W9              	100.00%
Bootstrap support for Q4Q1V0 as seed ortholog is 100%.
Bootstrap support for B3L9W9 as seed ortholog is 100%.

Group of orthologs #245. Best score 274 bits
Score difference with first non-orthologous sequence - L.major:74 P.knowlesi:274

E9ADM4              	100.00%		B3L711              	100.00%
Bootstrap support for E9ADM4 as seed ortholog is 86%.
Bootstrap support for B3L711 as seed ortholog is 100%.

Group of orthologs #246. Best score 272 bits
Score difference with first non-orthologous sequence - L.major:272 P.knowlesi:272

E9AC78              	100.00%		B3L9M5              	100.00%
Q4Q9J5              	82.06%		
Bootstrap support for E9AC78 as seed ortholog is 100%.
Bootstrap support for B3L9M5 as seed ortholog is 100%.

Group of orthologs #247. Best score 272 bits
Score difference with first non-orthologous sequence - L.major:272 P.knowlesi:272

Q4QAI9              	100.00%		B3L4Y1              	100.00%
Bootstrap support for Q4QAI9 as seed ortholog is 100%.
Bootstrap support for B3L4Y1 as seed ortholog is 100%.

Group of orthologs #248. Best score 272 bits
Score difference with first non-orthologous sequence - L.major:272 P.knowlesi:272

Q4QDM2              	100.00%		B3L2K6              	100.00%
Bootstrap support for Q4QDM2 as seed ortholog is 100%.
Bootstrap support for B3L2K6 as seed ortholog is 100%.

Group of orthologs #249. Best score 270 bits
Score difference with first non-orthologous sequence - L.major:270 P.knowlesi:270

Q4Q2I5              	100.00%		B3L6H1              	100.00%
Bootstrap support for Q4Q2I5 as seed ortholog is 100%.
Bootstrap support for B3L6H1 as seed ortholog is 100%.

Group of orthologs #250. Best score 269 bits
Score difference with first non-orthologous sequence - L.major:269 P.knowlesi:171

Q4QC95              	100.00%		B3LA52              	100.00%
Bootstrap support for Q4QC95 as seed ortholog is 100%.
Bootstrap support for B3LA52 as seed ortholog is 99%.

Group of orthologs #251. Best score 269 bits
Score difference with first non-orthologous sequence - L.major:120 P.knowlesi:64

Q4QJI9              	100.00%		B3L6M6              	100.00%
Bootstrap support for Q4QJI9 as seed ortholog is 99%.
Bootstrap support for B3L6M6 as seed ortholog is 95%.

Group of orthologs #252. Best score 267 bits
Score difference with first non-orthologous sequence - L.major:169 P.knowlesi:200

Q4Q7Y7              	100.00%		B3L122              	100.00%
Bootstrap support for Q4Q7Y7 as seed ortholog is 99%.
Bootstrap support for B3L122 as seed ortholog is 100%.

Group of orthologs #253. Best score 267 bits
Score difference with first non-orthologous sequence - L.major:131 P.knowlesi:149

Q4QHT2              	100.00%		B3LBF2              	100.00%
Bootstrap support for Q4QHT2 as seed ortholog is 100%.
Bootstrap support for B3LBF2 as seed ortholog is 100%.

Group of orthologs #254. Best score 265 bits
Score difference with first non-orthologous sequence - L.major:265 P.knowlesi:265

Q4QBG5              	100.00%		B3LAG9              	100.00%
Bootstrap support for Q4QBG5 as seed ortholog is 100%.
Bootstrap support for B3LAG9 as seed ortholog is 100%.

Group of orthologs #255. Best score 264 bits
Score difference with first non-orthologous sequence - L.major:264 P.knowlesi:264

Q4Q0T1              	100.00%		B3L4H6              	100.00%
Bootstrap support for Q4Q0T1 as seed ortholog is 100%.
Bootstrap support for B3L4H6 as seed ortholog is 100%.

Group of orthologs #256. Best score 263 bits
Score difference with first non-orthologous sequence - L.major:94 P.knowlesi:79

Q4Q0M2              	100.00%		B3L8Y4              	100.00%
Q4Q3Z4              	19.03%		
Q4QI56              	5.53%		
Bootstrap support for Q4Q0M2 as seed ortholog is 99%.
Bootstrap support for B3L8Y4 as seed ortholog is 99%.

Group of orthologs #257. Best score 261 bits
Score difference with first non-orthologous sequence - L.major:261 P.knowlesi:261

Q4QC00              	100.00%		B3KZR0              	100.00%
Bootstrap support for Q4QC00 as seed ortholog is 100%.
Bootstrap support for B3KZR0 as seed ortholog is 100%.

Group of orthologs #258. Best score 260 bits
Score difference with first non-orthologous sequence - L.major:64 P.knowlesi:68

Q4Q5Y0              	100.00%		B3L1W8              	100.00%
Q6IMM3              	23.08%		
Bootstrap support for Q4Q5Y0 as seed ortholog is 99%.
Bootstrap support for B3L1W8 as seed ortholog is 99%.

Group of orthologs #259. Best score 260 bits
Score difference with first non-orthologous sequence - L.major:260 P.knowlesi:260

E9AF09              	100.00%		B3LAE0              	100.00%
E9AF10              	100.00%		
Bootstrap support for E9AF09 as seed ortholog is 100%.
Bootstrap support for E9AF10 as seed ortholog is 100%.
Bootstrap support for B3LAE0 as seed ortholog is 100%.

Group of orthologs #260. Best score 260 bits
Score difference with first non-orthologous sequence - L.major:260 P.knowlesi:260

Q4QE66              	100.00%		B3L1W5              	100.00%
Bootstrap support for Q4QE66 as seed ortholog is 100%.
Bootstrap support for B3L1W5 as seed ortholog is 100%.

Group of orthologs #261. Best score 259 bits
Score difference with first non-orthologous sequence - L.major:103 P.knowlesi:44

E9AD53              	100.00%		B3L6D9              	100.00%
Bootstrap support for E9AD53 as seed ortholog is 99%.
Bootstrap support for B3L6D9 as seed ortholog is 98%.

Group of orthologs #262. Best score 259 bits
Score difference with first non-orthologous sequence - L.major:259 P.knowlesi:259

E9AFE9              	100.00%		B3L9C8              	100.00%
Bootstrap support for E9AFE9 as seed ortholog is 100%.
Bootstrap support for B3L9C8 as seed ortholog is 100%.

Group of orthologs #263. Best score 258 bits
Score difference with first non-orthologous sequence - L.major:258 P.knowlesi:258

E9AET7              	100.00%		B3L4W9              	100.00%
E9AET6              	73.67%		
E9AET9              	67.53%		
E9AET8              	45.14%		
Bootstrap support for E9AET7 as seed ortholog is 100%.
Bootstrap support for B3L4W9 as seed ortholog is 100%.

Group of orthologs #264. Best score 258 bits
Score difference with first non-orthologous sequence - L.major:258 P.knowlesi:115

Q4Q7B4              	100.00%		B3L067              	100.00%
Bootstrap support for Q4Q7B4 as seed ortholog is 100%.
Bootstrap support for B3L067 as seed ortholog is 99%.

Group of orthologs #265. Best score 257 bits
Score difference with first non-orthologous sequence - L.major:257 P.knowlesi:257

E9AFH5              	100.00%		B3L5B3              	100.00%
Bootstrap support for E9AFH5 as seed ortholog is 100%.
Bootstrap support for B3L5B3 as seed ortholog is 100%.

Group of orthologs #266. Best score 257 bits
Score difference with first non-orthologous sequence - L.major:51 P.knowlesi:97

Q4Q573              	100.00%		B3LCV2              	100.00%
Bootstrap support for Q4Q573 as seed ortholog is 97%.
Bootstrap support for B3LCV2 as seed ortholog is 99%.

Group of orthologs #267. Best score 256 bits
Score difference with first non-orthologous sequence - L.major:78 P.knowlesi:82

E9ACW0              	100.00%		B3LBB4              	100.00%
Q4QCG6              	16.49%		
Bootstrap support for E9ACW0 as seed ortholog is 97%.
Bootstrap support for B3LBB4 as seed ortholog is 96%.

Group of orthologs #268. Best score 256 bits
Score difference with first non-orthologous sequence - L.major:256 P.knowlesi:256

Q4Q5J3              	100.00%		B3L8B6              	100.00%
Bootstrap support for Q4Q5J3 as seed ortholog is 100%.
Bootstrap support for B3L8B6 as seed ortholog is 100%.

Group of orthologs #269. Best score 253 bits
Score difference with first non-orthologous sequence - L.major:253 P.knowlesi:253

Q4QCG8              	100.00%		B3L4Q7              	100.00%
Bootstrap support for Q4QCG8 as seed ortholog is 100%.
Bootstrap support for B3L4Q7 as seed ortholog is 100%.

Group of orthologs #270. Best score 252 bits
Score difference with first non-orthologous sequence - L.major:252 P.knowlesi:252

Q4QG78              	100.00%		B3L0S2              	100.00%
Bootstrap support for Q4QG78 as seed ortholog is 100%.
Bootstrap support for B3L0S2 as seed ortholog is 100%.

Group of orthologs #271. Best score 252 bits
Score difference with first non-orthologous sequence - L.major:149 P.knowlesi:252

Q4QGG2              	100.00%		B3LAC9              	100.00%
Bootstrap support for Q4QGG2 as seed ortholog is 99%.
Bootstrap support for B3LAC9 as seed ortholog is 100%.

Group of orthologs #272. Best score 250 bits
Score difference with first non-orthologous sequence - L.major:53 P.knowlesi:250

Q4QH82              	100.00%		B3L8I7              	100.00%
Q4QHL7              	100.00%		
E9ACJ5              	36.64%		
Bootstrap support for Q4QH82 as seed ortholog is 94%.
Bootstrap support for Q4QHL7 as seed ortholog is 91%.
Bootstrap support for B3L8I7 as seed ortholog is 100%.

Group of orthologs #273. Best score 250 bits
Score difference with first non-orthologous sequence - L.major:250 P.knowlesi:250

E9AFK8              	100.00%		B3L8V3              	100.00%
Bootstrap support for E9AFK8 as seed ortholog is 100%.
Bootstrap support for B3L8V3 as seed ortholog is 100%.

Group of orthologs #274. Best score 250 bits
Score difference with first non-orthologous sequence - L.major:94 P.knowlesi:51

Q4QEB1              	100.00%		B3KZG3              	100.00%
Bootstrap support for Q4QEB1 as seed ortholog is 95%.
Bootstrap support for B3KZG3 as seed ortholog is 90%.

Group of orthologs #275. Best score 248 bits
Score difference with first non-orthologous sequence - L.major:248 P.knowlesi:248

Q4Q6S3              	100.00%		B3L1H7              	100.00%
E9AF12              	95.53%		
Bootstrap support for Q4Q6S3 as seed ortholog is 100%.
Bootstrap support for B3L1H7 as seed ortholog is 100%.

Group of orthologs #276. Best score 248 bits
Score difference with first non-orthologous sequence - L.major:248 P.knowlesi:248

Q4Q3F0              	100.00%		B3L3C9              	100.00%
Bootstrap support for Q4Q3F0 as seed ortholog is 100%.
Bootstrap support for B3L3C9 as seed ortholog is 100%.

Group of orthologs #277. Best score 248 bits
Score difference with first non-orthologous sequence - L.major:248 P.knowlesi:248

Q95Z84              	100.00%		B3L598              	100.00%
Bootstrap support for Q95Z84 as seed ortholog is 100%.
Bootstrap support for B3L598 as seed ortholog is 100%.

Group of orthologs #278. Best score 248 bits
Score difference with first non-orthologous sequence - L.major:248 P.knowlesi:248

Q4QH75              	100.00%		B3L814              	100.00%
Bootstrap support for Q4QH75 as seed ortholog is 100%.
Bootstrap support for B3L814 as seed ortholog is 100%.

Group of orthologs #279. Best score 247 bits
Score difference with first non-orthologous sequence - L.major:247 P.knowlesi:247

Q4QC52              	100.00%		B3LBU1              	100.00%
Bootstrap support for Q4QC52 as seed ortholog is 100%.
Bootstrap support for B3LBU1 as seed ortholog is 100%.

Group of orthologs #280. Best score 246 bits
Score difference with first non-orthologous sequence - L.major:246 P.knowlesi:246

Q868B1              	100.00%		B3L0A6              	100.00%
Bootstrap support for Q868B1 as seed ortholog is 100%.
Bootstrap support for B3L0A6 as seed ortholog is 100%.

Group of orthologs #281. Best score 245 bits
Score difference with first non-orthologous sequence - L.major:245 P.knowlesi:245

Q4Q6D6              	100.00%		B3LCT1              	100.00%
Q4Q6D5              	42.18%		
Q4Q6D4              	41.56%		
Q4QBE9              	27.00%		
Q4QBF4              	26.44%		
Q4QBF3              	26.18%		
Q4Q6B9              	21.70%		
Bootstrap support for Q4Q6D6 as seed ortholog is 100%.
Bootstrap support for B3LCT1 as seed ortholog is 100%.

Group of orthologs #282. Best score 245 bits
Score difference with first non-orthologous sequence - L.major:245 P.knowlesi:245

Q4Q0Q0              	100.00%		B3L230              	100.00%
Bootstrap support for Q4Q0Q0 as seed ortholog is 100%.
Bootstrap support for B3L230 as seed ortholog is 100%.

Group of orthologs #283. Best score 245 bits
Score difference with first non-orthologous sequence - L.major:245 P.knowlesi:245

Q4QH56              	100.00%		B3L786              	100.00%
Bootstrap support for Q4QH56 as seed ortholog is 100%.
Bootstrap support for B3L786 as seed ortholog is 100%.

Group of orthologs #284. Best score 244 bits
Score difference with first non-orthologous sequence - L.major:244 P.knowlesi:244

Q4Q4A0              	100.00%		B3L9A1              	100.00%
Bootstrap support for Q4Q4A0 as seed ortholog is 100%.
Bootstrap support for B3L9A1 as seed ortholog is 100%.

Group of orthologs #285. Best score 241 bits
Score difference with first non-orthologous sequence - L.major:162 P.knowlesi:95

E9ACH0              	100.00%		B3L611              	100.00%
E9AC38              	34.09%		B3LCZ9              	7.88%
E9AC40              	32.32%		
E9AC43              	31.65%		
E9AC41              	29.79%		
Bootstrap support for E9ACH0 as seed ortholog is 99%.
Bootstrap support for B3L611 as seed ortholog is 98%.

Group of orthologs #286. Best score 241 bits
Score difference with first non-orthologous sequence - L.major:167 P.knowlesi:241

Q4QJ98              	100.00%		B3L430              	100.00%
Bootstrap support for Q4QJ98 as seed ortholog is 100%.
Bootstrap support for B3L430 as seed ortholog is 100%.

Group of orthologs #287. Best score 240 bits
Score difference with first non-orthologous sequence - L.major:240 P.knowlesi:22

Q4QFM2              	100.00%		B3L3N8              	100.00%
Q4QFM4              	19.16%		
Q4Q3D8              	16.59%		
Bootstrap support for Q4QFM2 as seed ortholog is 100%.
Bootstrap support for B3L3N8 as seed ortholog is 70%.
Alternative seed ortholog is B3LB98 (22 bits away from this cluster)

Group of orthologs #288. Best score 239 bits
Score difference with first non-orthologous sequence - L.major:44 P.knowlesi:52

E9ACY2              	100.00%		B3L0A3              	100.00%
Bootstrap support for E9ACY2 as seed ortholog is 78%.
Bootstrap support for B3L0A3 as seed ortholog is 94%.

Group of orthologs #289. Best score 239 bits
Score difference with first non-orthologous sequence - L.major:185 P.knowlesi:239

E9AFL2              	100.00%		B3L021              	100.00%
Bootstrap support for E9AFL2 as seed ortholog is 99%.
Bootstrap support for B3L021 as seed ortholog is 100%.

Group of orthologs #290. Best score 239 bits
Score difference with first non-orthologous sequence - L.major:239 P.knowlesi:239

Q4QC13              	100.00%		B3L7X1              	100.00%
Bootstrap support for Q4QC13 as seed ortholog is 100%.
Bootstrap support for B3L7X1 as seed ortholog is 100%.

Group of orthologs #291. Best score 238 bits
Score difference with first non-orthologous sequence - L.major:188 P.knowlesi:238

Q4QEK4              	100.00%		B3L0Z7              	100.00%
Bootstrap support for Q4QEK4 as seed ortholog is 100%.
Bootstrap support for B3L0Z7 as seed ortholog is 100%.

Group of orthologs #292. Best score 237 bits
Score difference with first non-orthologous sequence - L.major:76 P.knowlesi:51

Q4QJG6              	100.00%		B3L8Q6              	100.00%
Bootstrap support for Q4QJG6 as seed ortholog is 72%.
Alternative seed ortholog is Q4Q0X4 (76 bits away from this cluster)
Bootstrap support for B3L8Q6 as seed ortholog is 97%.

Group of orthologs #293. Best score 236 bits
Score difference with first non-orthologous sequence - L.major:51 P.knowlesi:6

Q4Q449              	100.00%		B3L4U0              	100.00%
Bootstrap support for Q4Q449 as seed ortholog is 87%.
Bootstrap support for B3L4U0 as seed ortholog is 56%.
Alternative seed ortholog is B3LA76 (6 bits away from this cluster)

Group of orthologs #294. Best score 236 bits
Score difference with first non-orthologous sequence - L.major:236 P.knowlesi:180

Q4QDX9              	100.00%		B3LA05              	100.00%
Bootstrap support for Q4QDX9 as seed ortholog is 100%.
Bootstrap support for B3LA05 as seed ortholog is 100%.

Group of orthologs #295. Best score 235 bits
Score difference with first non-orthologous sequence - L.major:235 P.knowlesi:235

E9AEI4              	100.00%		B3L3U0              	100.00%
Bootstrap support for E9AEI4 as seed ortholog is 100%.
Bootstrap support for B3L3U0 as seed ortholog is 100%.

Group of orthologs #296. Best score 235 bits
Score difference with first non-orthologous sequence - L.major:235 P.knowlesi:235

Q4Q732              	100.00%		B3L0H3              	100.00%
Bootstrap support for Q4Q732 as seed ortholog is 100%.
Bootstrap support for B3L0H3 as seed ortholog is 100%.

Group of orthologs #297. Best score 234 bits
Score difference with first non-orthologous sequence - L.major:234 P.knowlesi:234

Q4QDJ3              	100.00%		B3L4F8              	100.00%
Q4Q2X3              	18.66%		
Bootstrap support for Q4QDJ3 as seed ortholog is 100%.
Bootstrap support for B3L4F8 as seed ortholog is 100%.

Group of orthologs #298. Best score 234 bits
Score difference with first non-orthologous sequence - L.major:84 P.knowlesi:147

O97016              	100.00%		B3L024              	100.00%
Bootstrap support for O97016 as seed ortholog is 99%.
Bootstrap support for B3L024 as seed ortholog is 99%.

Group of orthologs #299. Best score 233 bits
Score difference with first non-orthologous sequence - L.major:233 P.knowlesi:233

E9AEY8              	100.00%		B3KZP9              	100.00%
Bootstrap support for E9AEY8 as seed ortholog is 100%.
Bootstrap support for B3KZP9 as seed ortholog is 100%.

Group of orthologs #300. Best score 233 bits
Score difference with first non-orthologous sequence - L.major:233 P.knowlesi:233

Q4Q2S0              	100.00%		B3L640              	100.00%
Bootstrap support for Q4Q2S0 as seed ortholog is 100%.
Bootstrap support for B3L640 as seed ortholog is 100%.

Group of orthologs #301. Best score 232 bits
Score difference with first non-orthologous sequence - L.major:232 P.knowlesi:232

E9AE98              	100.00%		B3L2Z8              	100.00%
Bootstrap support for E9AE98 as seed ortholog is 100%.
Bootstrap support for B3L2Z8 as seed ortholog is 100%.

Group of orthologs #302. Best score 232 bits
Score difference with first non-orthologous sequence - L.major:22 P.knowlesi:36

Q4Q5L5              	100.00%		B3L436              	100.00%
Bootstrap support for Q4Q5L5 as seed ortholog is 87%.
Bootstrap support for B3L436 as seed ortholog is 88%.

Group of orthologs #303. Best score 231 bits
Score difference with first non-orthologous sequence - L.major:231 P.knowlesi:231

Q4Q1Q9              	100.00%		B3L3Q4              	100.00%
Bootstrap support for Q4Q1Q9 as seed ortholog is 100%.
Bootstrap support for B3L3Q4 as seed ortholog is 100%.

Group of orthologs #304. Best score 231 bits
Score difference with first non-orthologous sequence - L.major:231 P.knowlesi:231

Q4Q4Z3              	100.00%		B3L5A0              	100.00%
Bootstrap support for Q4Q4Z3 as seed ortholog is 100%.
Bootstrap support for B3L5A0 as seed ortholog is 100%.

Group of orthologs #305. Best score 231 bits
Score difference with first non-orthologous sequence - L.major:166 P.knowlesi:231

Q4Q3F9              	100.00%		B3LC55              	100.00%
Bootstrap support for Q4Q3F9 as seed ortholog is 99%.
Bootstrap support for B3LC55 as seed ortholog is 100%.

Group of orthologs #306. Best score 230 bits
Score difference with first non-orthologous sequence - L.major:230 P.knowlesi:132

Q4Q3X8              	100.00%		B3L359              	100.00%
Bootstrap support for Q4Q3X8 as seed ortholog is 100%.
Bootstrap support for B3L359 as seed ortholog is 100%.

Group of orthologs #307. Best score 230 bits
Score difference with first non-orthologous sequence - L.major:230 P.knowlesi:230

Q4QD54              	100.00%		B3L8C3              	100.00%
Bootstrap support for Q4QD54 as seed ortholog is 100%.
Bootstrap support for B3L8C3 as seed ortholog is 100%.

Group of orthologs #308. Best score 230 bits
Score difference with first non-orthologous sequence - L.major:230 P.knowlesi:230

Q4QGM7              	100.00%		B3LAE6              	100.00%
Bootstrap support for Q4QGM7 as seed ortholog is 100%.
Bootstrap support for B3LAE6 as seed ortholog is 100%.

Group of orthologs #309. Best score 230 bits
Score difference with first non-orthologous sequence - L.major:230 P.knowlesi:230

Q4QH39              	100.00%		B3LAV2              	100.00%
Bootstrap support for Q4QH39 as seed ortholog is 100%.
Bootstrap support for B3LAV2 as seed ortholog is 100%.

Group of orthologs #310. Best score 229 bits
Score difference with first non-orthologous sequence - L.major:229 P.knowlesi:229

E9ADK4              	100.00%		B3L694              	100.00%
Bootstrap support for E9ADK4 as seed ortholog is 100%.
Bootstrap support for B3L694 as seed ortholog is 100%.

Group of orthologs #311. Best score 228 bits
Score difference with first non-orthologous sequence - L.major:228 P.knowlesi:228

Q4Q1M7              	100.00%		B3L1T3              	100.00%
Bootstrap support for Q4Q1M7 as seed ortholog is 100%.
Bootstrap support for B3L1T3 as seed ortholog is 100%.

Group of orthologs #312. Best score 228 bits
Score difference with first non-orthologous sequence - L.major:228 P.knowlesi:228

Q4Q0Z6              	100.00%		B3L3Y9              	100.00%
Bootstrap support for Q4Q0Z6 as seed ortholog is 100%.
Bootstrap support for B3L3Y9 as seed ortholog is 100%.

Group of orthologs #313. Best score 228 bits
Score difference with first non-orthologous sequence - L.major:228 P.knowlesi:228

Q4QE75              	100.00%		B3L693              	100.00%
Bootstrap support for Q4QE75 as seed ortholog is 100%.
Bootstrap support for B3L693 as seed ortholog is 100%.

Group of orthologs #314. Best score 228 bits
Score difference with first non-orthologous sequence - L.major:114 P.knowlesi:79

Q9GNC1              	100.00%		B3LB25              	100.00%
Bootstrap support for Q9GNC1 as seed ortholog is 100%.
Bootstrap support for B3LB25 as seed ortholog is 99%.

Group of orthologs #315. Best score 227 bits
Score difference with first non-orthologous sequence - L.major:141 P.knowlesi:145

Q4QJG7              	100.00%		B3LAI0              	100.00%
Bootstrap support for Q4QJG7 as seed ortholog is 99%.
Bootstrap support for B3LAI0 as seed ortholog is 99%.

Group of orthologs #316. Best score 227 bits
Score difference with first non-orthologous sequence - L.major:4 P.knowlesi:227

Q4QJG9              	100.00%		B3LBA1              	100.00%
Bootstrap support for Q4QJG9 as seed ortholog is 47%.
Alternative seed ortholog is Q4Q8I2 (4 bits away from this cluster)
Bootstrap support for B3LBA1 as seed ortholog is 100%.

Group of orthologs #317. Best score 225 bits
Score difference with first non-orthologous sequence - L.major:79 P.knowlesi:225

E9AC56              	100.00%		B3L310              	100.00%
Bootstrap support for E9AC56 as seed ortholog is 96%.
Bootstrap support for B3L310 as seed ortholog is 100%.

Group of orthologs #318. Best score 224 bits
Score difference with first non-orthologous sequence - L.major:47 P.knowlesi:57

Q4QBH1              	100.00%		B3L3Y1              	100.00%
Q4Q424              	13.26%		
Bootstrap support for Q4QBH1 as seed ortholog is 96%.
Bootstrap support for B3L3Y1 as seed ortholog is 98%.

Group of orthologs #319. Best score 224 bits
Score difference with first non-orthologous sequence - L.major:224 P.knowlesi:224

Q4QFV4              	100.00%		B3L787              	100.00%
Bootstrap support for Q4QFV4 as seed ortholog is 100%.
Bootstrap support for B3L787 as seed ortholog is 100%.

Group of orthologs #320. Best score 223 bits
Score difference with first non-orthologous sequence - L.major:223 P.knowlesi:147

Q4Q198              	100.00%		B3L1B8              	100.00%
Q4QH45              	8.30%		
Bootstrap support for Q4Q198 as seed ortholog is 100%.
Bootstrap support for B3L1B8 as seed ortholog is 100%.

Group of orthologs #321. Best score 223 bits
Score difference with first non-orthologous sequence - L.major:223 P.knowlesi:223

Q4Q6A1              	100.00%		B3L3M9              	100.00%
Bootstrap support for Q4Q6A1 as seed ortholog is 100%.
Bootstrap support for B3L3M9 as seed ortholog is 100%.

Group of orthologs #322. Best score 223 bits
Score difference with first non-orthologous sequence - L.major:108 P.knowlesi:223

Q4Q2D8              	100.00%		B3L838              	100.00%
Bootstrap support for Q4Q2D8 as seed ortholog is 99%.
Bootstrap support for B3L838 as seed ortholog is 100%.

Group of orthologs #323. Best score 223 bits
Score difference with first non-orthologous sequence - L.major:131 P.knowlesi:153

Q4QAA4              	100.00%		B3L5R4              	100.00%
Bootstrap support for Q4QAA4 as seed ortholog is 98%.
Bootstrap support for B3L5R4 as seed ortholog is 99%.

Group of orthologs #324. Best score 222 bits
Score difference with first non-orthologous sequence - L.major:222 P.knowlesi:222

Q4Q6Y9              	100.00%		B3L0S1              	100.00%
Bootstrap support for Q4Q6Y9 as seed ortholog is 100%.
Bootstrap support for B3L0S1 as seed ortholog is 100%.

Group of orthologs #325. Best score 222 bits
Score difference with first non-orthologous sequence - L.major:222 P.knowlesi:222

Q4QG31              	100.00%		B3L4K6              	100.00%
Bootstrap support for Q4QG31 as seed ortholog is 100%.
Bootstrap support for B3L4K6 as seed ortholog is 100%.

Group of orthologs #326. Best score 221 bits
Score difference with first non-orthologous sequence - L.major:221 P.knowlesi:221

Q4Q8H1              	100.00%		B3L6A6              	100.00%
Bootstrap support for Q4Q8H1 as seed ortholog is 100%.
Bootstrap support for B3L6A6 as seed ortholog is 100%.

Group of orthologs #327. Best score 221 bits
Score difference with first non-orthologous sequence - L.major:92 P.knowlesi:221

Q4QGV4              	100.00%		B3KZF5              	100.00%
Bootstrap support for Q4QGV4 as seed ortholog is 97%.
Bootstrap support for B3KZF5 as seed ortholog is 100%.

Group of orthologs #328. Best score 221 bits
Score difference with first non-orthologous sequence - L.major:221 P.knowlesi:221

Q4Q9R8              	100.00%		B3L9V4              	100.00%
Bootstrap support for Q4Q9R8 as seed ortholog is 100%.
Bootstrap support for B3L9V4 as seed ortholog is 100%.

Group of orthologs #329. Best score 220 bits
Score difference with first non-orthologous sequence - L.major:220 P.knowlesi:220

Q4Q1V1              	100.00%		B3L665              	100.00%
Q4QIM3              	100.00%		
Bootstrap support for Q4Q1V1 as seed ortholog is 100%.
Bootstrap support for Q4QIM3 as seed ortholog is 100%.
Bootstrap support for B3L665 as seed ortholog is 100%.

Group of orthologs #330. Best score 220 bits
Score difference with first non-orthologous sequence - L.major:83 P.knowlesi:220

Q4Q8V5              	100.00%		B3L2A8              	100.00%
Bootstrap support for Q4Q8V5 as seed ortholog is 96%.
Bootstrap support for B3L2A8 as seed ortholog is 100%.

Group of orthologs #331. Best score 220 bits
Score difference with first non-orthologous sequence - L.major:83 P.knowlesi:220

Q4Q369              	100.00%		B3L831              	100.00%
Bootstrap support for Q4Q369 as seed ortholog is 96%.
Bootstrap support for B3L831 as seed ortholog is 100%.

Group of orthologs #332. Best score 220 bits
Score difference with first non-orthologous sequence - L.major:220 P.knowlesi:220

Q4QE48              	100.00%		B3L739              	100.00%
Bootstrap support for Q4QE48 as seed ortholog is 100%.
Bootstrap support for B3L739 as seed ortholog is 100%.

Group of orthologs #333. Best score 218 bits
Score difference with first non-orthologous sequence - L.major:218 P.knowlesi:218

Q4Q3R4              	100.00%		B3L7E4              	100.00%
Bootstrap support for Q4Q3R4 as seed ortholog is 100%.
Bootstrap support for B3L7E4 as seed ortholog is 100%.

Group of orthologs #334. Best score 216 bits
Score difference with first non-orthologous sequence - L.major:216 P.knowlesi:216

Q4Q1R5              	100.00%		B3LA43              	100.00%
Bootstrap support for Q4Q1R5 as seed ortholog is 100%.
Bootstrap support for B3LA43 as seed ortholog is 100%.

Group of orthologs #335. Best score 216 bits
Score difference with first non-orthologous sequence - L.major:216 P.knowlesi:216

Q4Q7U7              	100.00%		B3LAK2              	100.00%
Bootstrap support for Q4Q7U7 as seed ortholog is 100%.
Bootstrap support for B3LAK2 as seed ortholog is 100%.

Group of orthologs #336. Best score 216 bits
Score difference with first non-orthologous sequence - L.major:100 P.knowlesi:216

Q4QFL6              	100.00%		B3L7F1              	100.00%
Bootstrap support for Q4QFL6 as seed ortholog is 98%.
Bootstrap support for B3L7F1 as seed ortholog is 100%.

Group of orthologs #337. Best score 215 bits
Score difference with first non-orthologous sequence - L.major:215 P.knowlesi:215

Q4Q932              	100.00%		B3LAR7              	100.00%
Bootstrap support for Q4Q932 as seed ortholog is 100%.
Bootstrap support for B3LAR7 as seed ortholog is 100%.

Group of orthologs #338. Best score 215 bits
Score difference with first non-orthologous sequence - L.major:215 P.knowlesi:215

Q4QA83              	100.00%		B3LC50              	100.00%
Bootstrap support for Q4QA83 as seed ortholog is 100%.
Bootstrap support for B3LC50 as seed ortholog is 100%.

Group of orthologs #339. Best score 214 bits
Score difference with first non-orthologous sequence - L.major:214 P.knowlesi:214

Q4QCE9              	100.00%		B3L3C0              	100.00%
Bootstrap support for Q4QCE9 as seed ortholog is 100%.
Bootstrap support for B3L3C0 as seed ortholog is 100%.

Group of orthologs #340. Best score 214 bits
Score difference with first non-orthologous sequence - L.major:112 P.knowlesi:214

Q4QDZ5              	100.00%		B3L6G1              	100.00%
Bootstrap support for Q4QDZ5 as seed ortholog is 99%.
Bootstrap support for B3L6G1 as seed ortholog is 100%.

Group of orthologs #341. Best score 214 bits
Score difference with first non-orthologous sequence - L.major:2 P.knowlesi:214

Q4QF38              	100.00%		B3L6L5              	100.00%
Bootstrap support for Q4QF38 as seed ortholog is 47%.
Alternative seed ortholog is Q4Q1M8 (2 bits away from this cluster)
Bootstrap support for B3L6L5 as seed ortholog is 100%.

Group of orthologs #342. Best score 213 bits
Score difference with first non-orthologous sequence - L.major:213 P.knowlesi:101

Q4Q059              	100.00%		B3L111              	100.00%
Bootstrap support for Q4Q059 as seed ortholog is 100%.
Bootstrap support for B3L111 as seed ortholog is 99%.

Group of orthologs #343. Best score 213 bits
Score difference with first non-orthologous sequence - L.major:213 P.knowlesi:80

Q4QAP8              	100.00%		B3LA18              	100.00%
Bootstrap support for Q4QAP8 as seed ortholog is 100%.
Bootstrap support for B3LA18 as seed ortholog is 99%.

Group of orthologs #344. Best score 213 bits
Score difference with first non-orthologous sequence - L.major:213 P.knowlesi:213

Q4QFS8              	100.00%		B3L9T7              	100.00%
Bootstrap support for Q4QFS8 as seed ortholog is 100%.
Bootstrap support for B3L9T7 as seed ortholog is 100%.

Group of orthologs #345. Best score 212 bits
Score difference with first non-orthologous sequence - L.major:212 P.knowlesi:212

Q4QEL0              	100.00%		B3LAU5              	100.00%
E9ADJ7              	7.92%		
Bootstrap support for Q4QEL0 as seed ortholog is 100%.
Bootstrap support for B3LAU5 as seed ortholog is 100%.

Group of orthologs #346. Best score 212 bits
Score difference with first non-orthologous sequence - L.major:212 P.knowlesi:212

Q4QFI0              	100.00%		B3L1F5              	100.00%
Bootstrap support for Q4QFI0 as seed ortholog is 100%.
Bootstrap support for B3L1F5 as seed ortholog is 100%.

Group of orthologs #347. Best score 211 bits
Score difference with first non-orthologous sequence - L.major:211 P.knowlesi:211

Q4QD19              	100.00%		B3LAN9              	100.00%
Bootstrap support for Q4QD19 as seed ortholog is 100%.
Bootstrap support for B3LAN9 as seed ortholog is 100%.

Group of orthologs #348. Best score 209 bits
Score difference with first non-orthologous sequence - L.major:73 P.knowlesi:209

Q4Q596              	100.00%		B3LC58              	100.00%
Q4Q597              	100.00%		
Bootstrap support for Q4Q596 as seed ortholog is 98%.
Bootstrap support for Q4Q597 as seed ortholog is 98%.
Bootstrap support for B3LC58 as seed ortholog is 100%.

Group of orthologs #349. Best score 209 bits
Score difference with first non-orthologous sequence - L.major:209 P.knowlesi:209

Q4QBY3              	100.00%		B3L3R6              	100.00%
Bootstrap support for Q4QBY3 as seed ortholog is 100%.
Bootstrap support for B3L3R6 as seed ortholog is 100%.

Group of orthologs #350. Best score 206 bits
Score difference with first non-orthologous sequence - L.major:206 P.knowlesi:206

E9ADC7              	100.00%		B3L8L1              	100.00%
Bootstrap support for E9ADC7 as seed ortholog is 100%.
Bootstrap support for B3L8L1 as seed ortholog is 100%.

Group of orthologs #351. Best score 206 bits
Score difference with first non-orthologous sequence - L.major:83 P.knowlesi:142

Q4Q3J7              	100.00%		B3L3M8              	100.00%
Bootstrap support for Q4Q3J7 as seed ortholog is 99%.
Bootstrap support for B3L3M8 as seed ortholog is 100%.

Group of orthologs #352. Best score 206 bits
Score difference with first non-orthologous sequence - L.major:97 P.knowlesi:95

Q4QJI5              	100.00%		B3L4G3              	100.00%
Bootstrap support for Q4QJI5 as seed ortholog is 99%.
Bootstrap support for B3L4G3 as seed ortholog is 98%.

Group of orthologs #353. Best score 205 bits
Score difference with first non-orthologous sequence - L.major:205 P.knowlesi:205

Q4Q2T0              	100.00%		B3L2Z6              	100.00%
Bootstrap support for Q4Q2T0 as seed ortholog is 100%.
Bootstrap support for B3L2Z6 as seed ortholog is 100%.

Group of orthologs #354. Best score 204 bits
Score difference with first non-orthologous sequence - L.major:131 P.knowlesi:128

Q4Q1J8              	100.00%		B3L0I9              	100.00%
Q4Q232              	7.30%		
Bootstrap support for Q4Q1J8 as seed ortholog is 97%.
Bootstrap support for B3L0I9 as seed ortholog is 98%.

Group of orthologs #355. Best score 204 bits
Score difference with first non-orthologous sequence - L.major:204 P.knowlesi:204

E9ACF5              	100.00%		B3LCC1              	100.00%
Bootstrap support for E9ACF5 as seed ortholog is 100%.
Bootstrap support for B3LCC1 as seed ortholog is 100%.

Group of orthologs #356. Best score 203 bits
Score difference with first non-orthologous sequence - L.major:203 P.knowlesi:203

Q4Q9L8              	100.00%		B3L3I6              	100.00%
Bootstrap support for Q4Q9L8 as seed ortholog is 100%.
Bootstrap support for B3L3I6 as seed ortholog is 100%.

Group of orthologs #357. Best score 203 bits
Score difference with first non-orthologous sequence - L.major:203 P.knowlesi:203

Q4QC89              	100.00%		B3L4C7              	100.00%
Bootstrap support for Q4QC89 as seed ortholog is 100%.
Bootstrap support for B3L4C7 as seed ortholog is 100%.

Group of orthologs #358. Best score 203 bits
Score difference with first non-orthologous sequence - L.major:203 P.knowlesi:203

Q66NE0              	100.00%		B3L8K9              	100.00%
Bootstrap support for Q66NE0 as seed ortholog is 100%.
Bootstrap support for B3L8K9 as seed ortholog is 100%.

Group of orthologs #359. Best score 203 bits
Score difference with first non-orthologous sequence - L.major:27 P.knowlesi:37

Q4QFH1              	100.00%		B3LDG0              	100.00%
Bootstrap support for Q4QFH1 as seed ortholog is 61%.
Alternative seed ortholog is Q4Q0X4 (27 bits away from this cluster)
Bootstrap support for B3LDG0 as seed ortholog is 84%.

Group of orthologs #360. Best score 203 bits
Score difference with first non-orthologous sequence - L.major:203 P.knowlesi:203

Q4QJB3              	100.00%		B3LCZ1              	100.00%
Bootstrap support for Q4QJB3 as seed ortholog is 100%.
Bootstrap support for B3LCZ1 as seed ortholog is 100%.

Group of orthologs #361. Best score 202 bits
Score difference with first non-orthologous sequence - L.major:202 P.knowlesi:202

P25204              	100.00%		B3LAS9              	100.00%
Bootstrap support for P25204 as seed ortholog is 100%.
Bootstrap support for B3LAS9 as seed ortholog is 100%.

Group of orthologs #362. Best score 202 bits
Score difference with first non-orthologous sequence - L.major:202 P.knowlesi:51

Q4QDQ2              	100.00%		B3KZ33              	100.00%
Bootstrap support for Q4QDQ2 as seed ortholog is 100%.
Bootstrap support for B3KZ33 as seed ortholog is 82%.

Group of orthologs #363. Best score 202 bits
Score difference with first non-orthologous sequence - L.major:202 P.knowlesi:202

Q4QG60              	100.00%		B3LC08              	100.00%
Bootstrap support for Q4QG60 as seed ortholog is 100%.
Bootstrap support for B3LC08 as seed ortholog is 100%.

Group of orthologs #364. Best score 202 bits
Score difference with first non-orthologous sequence - L.major:202 P.knowlesi:202

Q4QIE7              	100.00%		B3LD25              	100.00%
Bootstrap support for Q4QIE7 as seed ortholog is 100%.
Bootstrap support for B3LD25 as seed ortholog is 100%.

Group of orthologs #365. Best score 200 bits
Score difference with first non-orthologous sequence - L.major:200 P.knowlesi:200

Q4QH08              	100.00%		B3L1G8              	100.00%
Bootstrap support for Q4QH08 as seed ortholog is 100%.
Bootstrap support for B3L1G8 as seed ortholog is 100%.

Group of orthologs #366. Best score 200 bits
Score difference with first non-orthologous sequence - L.major:200 P.knowlesi:200

Q4QIT4              	100.00%		B3L714              	100.00%
Bootstrap support for Q4QIT4 as seed ortholog is 100%.
Bootstrap support for B3L714 as seed ortholog is 100%.

Group of orthologs #367. Best score 199 bits
Score difference with first non-orthologous sequence - L.major:199 P.knowlesi:199

Q9U1E1              	100.00%		B3L6V5              	100.00%
Bootstrap support for Q9U1E1 as seed ortholog is 100%.
Bootstrap support for B3L6V5 as seed ortholog is 100%.

Group of orthologs #368. Best score 198 bits
Score difference with first non-orthologous sequence - L.major:33 P.knowlesi:38

Q4QJ67              	100.00%		B3L4V7              	100.00%
Bootstrap support for Q4QJ67 as seed ortholog is 89%.
Bootstrap support for B3L4V7 as seed ortholog is 92%.

Group of orthologs #369. Best score 198 bits
Score difference with first non-orthologous sequence - L.major:99 P.knowlesi:75

Q9NED4              	100.00%		B3L5Z0              	100.00%
Bootstrap support for Q9NED4 as seed ortholog is 99%.
Bootstrap support for B3L5Z0 as seed ortholog is 99%.

Group of orthologs #370. Best score 198 bits
Score difference with first non-orthologous sequence - L.major:198 P.knowlesi:198

Q4QJ88              	100.00%		B3L9B3              	100.00%
Bootstrap support for Q4QJ88 as seed ortholog is 100%.
Bootstrap support for B3L9B3 as seed ortholog is 100%.

Group of orthologs #371. Best score 197 bits
Score difference with first non-orthologous sequence - L.major:197 P.knowlesi:75

Q4QFT9              	100.00%		B3L8M3              	100.00%
Bootstrap support for Q4QFT9 as seed ortholog is 100%.
Bootstrap support for B3L8M3 as seed ortholog is 97%.

Group of orthologs #372. Best score 197 bits
Score difference with first non-orthologous sequence - L.major:38 P.knowlesi:51

Q4QHC3              	100.00%		B3LC19              	100.00%
Bootstrap support for Q4QHC3 as seed ortholog is 89%.
Bootstrap support for B3LC19 as seed ortholog is 94%.

Group of orthologs #373. Best score 196 bits
Score difference with first non-orthologous sequence - L.major:97 P.knowlesi:196

Q4Q8E2              	100.00%		B3L2P9              	100.00%
E9AF79              	7.50%		
Bootstrap support for Q4Q8E2 as seed ortholog is 97%.
Bootstrap support for B3L2P9 as seed ortholog is 100%.

Group of orthologs #374. Best score 196 bits
Score difference with first non-orthologous sequence - L.major:196 P.knowlesi:196

Q4Q0P6              	100.00%		B3LD39              	100.00%
Bootstrap support for Q4Q0P6 as seed ortholog is 100%.
Bootstrap support for B3LD39 as seed ortholog is 100%.

Group of orthologs #375. Best score 195 bits
Score difference with first non-orthologous sequence - L.major:195 P.knowlesi:195

Q4QJ37              	100.00%		B3L7Q9              	100.00%
Q4QJ39              	100.00%		
Bootstrap support for Q4QJ37 as seed ortholog is 100%.
Bootstrap support for Q4QJ39 as seed ortholog is 100%.
Bootstrap support for B3L7Q9 as seed ortholog is 100%.

Group of orthologs #376. Best score 195 bits
Score difference with first non-orthologous sequence - L.major:195 P.knowlesi:195

Q4Q0M3              	100.00%		B3L2G8              	100.00%
Bootstrap support for Q4Q0M3 as seed ortholog is 100%.
Bootstrap support for B3L2G8 as seed ortholog is 100%.

Group of orthologs #377. Best score 195 bits
Score difference with first non-orthologous sequence - L.major:195 P.knowlesi:195

Q4Q9H1              	100.00%		B3L0B0              	100.00%
Bootstrap support for Q4Q9H1 as seed ortholog is 100%.
Bootstrap support for B3L0B0 as seed ortholog is 100%.

Group of orthologs #378. Best score 194 bits
Score difference with first non-orthologous sequence - L.major:194 P.knowlesi:194

E9ADB9              	100.00%		B3L5A9              	100.00%
Bootstrap support for E9ADB9 as seed ortholog is 100%.
Bootstrap support for B3L5A9 as seed ortholog is 100%.

Group of orthologs #379. Best score 194 bits
Score difference with first non-orthologous sequence - L.major:194 P.knowlesi:194

E9ACB2              	100.00%		B3LAY5              	100.00%
Bootstrap support for E9ACB2 as seed ortholog is 100%.
Bootstrap support for B3LAY5 as seed ortholog is 100%.

Group of orthologs #380. Best score 193 bits
Score difference with first non-orthologous sequence - L.major:39 P.knowlesi:29

Q4Q0D3              	100.00%		B3L0M2              	100.00%
                    	       		B3LA59              	50.32%
                    	       		B3KZU8              	24.84%
Bootstrap support for Q4Q0D3 as seed ortholog is 78%.
Bootstrap support for B3L0M2 as seed ortholog is 93%.

Group of orthologs #381. Best score 193 bits
Score difference with first non-orthologous sequence - L.major:141 P.knowlesi:112

P69201              	100.00%		B3L6W2              	100.00%
Bootstrap support for P69201 as seed ortholog is 100%.
Bootstrap support for B3L6W2 as seed ortholog is 100%.

Group of orthologs #382. Best score 193 bits
Score difference with first non-orthologous sequence - L.major:81 P.knowlesi:99

Q4QJK0              	100.00%		B3L1J2              	100.00%
Bootstrap support for Q4QJK0 as seed ortholog is 99%.
Bootstrap support for B3L1J2 as seed ortholog is 99%.

Group of orthologs #383. Best score 192 bits
Score difference with first non-orthologous sequence - L.major:192 P.knowlesi:192

Q4VT70              	100.00%		B3L7G9              	100.00%
Q4QCJ0              	99.73%		
Bootstrap support for Q4VT70 as seed ortholog is 100%.
Bootstrap support for B3L7G9 as seed ortholog is 100%.

Group of orthologs #384. Best score 192 bits
Score difference with first non-orthologous sequence - L.major:37 P.knowlesi:16

E9AEB9              	100.00%		B3L603              	100.00%
Bootstrap support for E9AEB9 as seed ortholog is 85%.
Bootstrap support for B3L603 as seed ortholog is 67%.
Alternative seed ortholog is B3L082 (16 bits away from this cluster)

Group of orthologs #385. Best score 192 bits
Score difference with first non-orthologous sequence - L.major:54 P.knowlesi:63

Q4QIM0              	100.00%		B3KZK4              	100.00%
Bootstrap support for Q4QIM0 as seed ortholog is 98%.
Bootstrap support for B3KZK4 as seed ortholog is 99%.

Group of orthologs #386. Best score 191 bits
Score difference with first non-orthologous sequence - L.major:191 P.knowlesi:132

E9AFK3              	100.00%		B3L8R4              	100.00%
Bootstrap support for E9AFK3 as seed ortholog is 100%.
Bootstrap support for B3L8R4 as seed ortholog is 100%.

Group of orthologs #387. Best score 191 bits
Score difference with first non-orthologous sequence - L.major:191 P.knowlesi:191

Q4Q5P8              	100.00%		B3LAJ9              	100.00%
Bootstrap support for Q4Q5P8 as seed ortholog is 100%.
Bootstrap support for B3LAJ9 as seed ortholog is 100%.

Group of orthologs #388. Best score 190 bits
Score difference with first non-orthologous sequence - L.major:95 P.knowlesi:146

Q4QDK5              	100.00%		B3LAB0              	100.00%
Bootstrap support for Q4QDK5 as seed ortholog is 99%.
Bootstrap support for B3LAB0 as seed ortholog is 99%.

Group of orthologs #389. Best score 190 bits
Score difference with first non-orthologous sequence - L.major:190 P.knowlesi:190

Q4QIT8              	100.00%		B3L9D4              	100.00%
Bootstrap support for Q4QIT8 as seed ortholog is 100%.
Bootstrap support for B3L9D4 as seed ortholog is 100%.

Group of orthologs #390. Best score 189 bits
Score difference with first non-orthologous sequence - L.major:189 P.knowlesi:189

Q4QF95              	100.00%		B3LAC7              	100.00%
Q4QJ70              	13.08%		
Q4QJ71              	12.47%		
Bootstrap support for Q4QF95 as seed ortholog is 100%.
Bootstrap support for B3LAC7 as seed ortholog is 100%.

Group of orthologs #391. Best score 189 bits
Score difference with first non-orthologous sequence - L.major:189 P.knowlesi:189

E9AEX1              	100.00%		B3L376              	100.00%
Bootstrap support for E9AEX1 as seed ortholog is 100%.
Bootstrap support for B3L376 as seed ortholog is 100%.

Group of orthologs #392. Best score 189 bits
Score difference with first non-orthologous sequence - L.major:68 P.knowlesi:66

Q4Q2W1              	100.00%		B3L239              	100.00%
Bootstrap support for Q4Q2W1 as seed ortholog is 99%.
Bootstrap support for B3L239 as seed ortholog is 99%.

Group of orthologs #393. Best score 189 bits
Score difference with first non-orthologous sequence - L.major:189 P.knowlesi:189

Q4QHU0              	100.00%		B3L7E0              	100.00%
Bootstrap support for Q4QHU0 as seed ortholog is 100%.
Bootstrap support for B3L7E0 as seed ortholog is 100%.

Group of orthologs #394. Best score 189 bits
Score difference with first non-orthologous sequence - L.major:189 P.knowlesi:189

Q4QIP6              	100.00%		B3L9P8              	100.00%
Bootstrap support for Q4QIP6 as seed ortholog is 100%.
Bootstrap support for B3L9P8 as seed ortholog is 100%.

Group of orthologs #395. Best score 189 bits
Score difference with first non-orthologous sequence - L.major:189 P.knowlesi:189

Q4QHS9              	100.00%		B3LB36              	100.00%
Bootstrap support for Q4QHS9 as seed ortholog is 100%.
Bootstrap support for B3LB36 as seed ortholog is 100%.

Group of orthologs #396. Best score 188 bits
Score difference with first non-orthologous sequence - L.major:96 P.knowlesi:115

E9ACB3              	100.00%		B3L398              	100.00%
Bootstrap support for E9ACB3 as seed ortholog is 99%.
Bootstrap support for B3L398 as seed ortholog is 99%.

Group of orthologs #397. Best score 188 bits
Score difference with first non-orthologous sequence - L.major:188 P.knowlesi:188

Q4Q5H6              	100.00%		B3LAC8              	100.00%
Bootstrap support for Q4Q5H6 as seed ortholog is 100%.
Bootstrap support for B3LAC8 as seed ortholog is 100%.

Group of orthologs #398. Best score 188 bits
Score difference with first non-orthologous sequence - L.major:188 P.knowlesi:188

Q4QBL1              	100.00%		B3L593              	100.00%
Bootstrap support for Q4QBL1 as seed ortholog is 100%.
Bootstrap support for B3L593 as seed ortholog is 100%.

Group of orthologs #399. Best score 188 bits
Score difference with first non-orthologous sequence - L.major:188 P.knowlesi:188

Q4Q791              	100.00%		B3LB97              	100.00%
Bootstrap support for Q4Q791 as seed ortholog is 100%.
Bootstrap support for B3LB97 as seed ortholog is 100%.

Group of orthologs #400. Best score 188 bits
Score difference with first non-orthologous sequence - L.major:66 P.knowlesi:62

Q9N2P5              	100.00%		B3L342              	100.00%
Bootstrap support for Q9N2P5 as seed ortholog is 97%.
Bootstrap support for B3L342 as seed ortholog is 97%.

Group of orthologs #401. Best score 187 bits
Score difference with first non-orthologous sequence - L.major:187 P.knowlesi:187

Q4Q5I7              	100.00%		B3L5H2              	100.00%
Bootstrap support for Q4Q5I7 as seed ortholog is 100%.
Bootstrap support for B3L5H2 as seed ortholog is 100%.

Group of orthologs #402. Best score 187 bits
Score difference with first non-orthologous sequence - L.major:187 P.knowlesi:187

Q4QG19              	100.00%		B3L4D8              	100.00%
Bootstrap support for Q4QG19 as seed ortholog is 100%.
Bootstrap support for B3L4D8 as seed ortholog is 100%.

Group of orthologs #403. Best score 186 bits
Score difference with first non-orthologous sequence - L.major:186 P.knowlesi:186

Q4FX73              	100.00%		B3L3W7              	100.00%
Bootstrap support for Q4FX73 as seed ortholog is 100%.
Bootstrap support for B3L3W7 as seed ortholog is 100%.

Group of orthologs #404. Best score 186 bits
Score difference with first non-orthologous sequence - L.major:186 P.knowlesi:186

E9ADM6              	100.00%		B3LCV0              	100.00%
Bootstrap support for E9ADM6 as seed ortholog is 100%.
Bootstrap support for B3LCV0 as seed ortholog is 100%.

Group of orthologs #405. Best score 185 bits
Score difference with first non-orthologous sequence - L.major:185 P.knowlesi:185

Q4Q1Y2              	100.00%		B3L567              	100.00%
Q4Q1Y3              	100.00%		
Bootstrap support for Q4Q1Y2 as seed ortholog is 100%.
Bootstrap support for Q4Q1Y3 as seed ortholog is 100%.
Bootstrap support for B3L567 as seed ortholog is 100%.

Group of orthologs #406. Best score 185 bits
Score difference with first non-orthologous sequence - L.major:46 P.knowlesi:59

E9AE03              	100.00%		B3L4Y4              	100.00%
Bootstrap support for E9AE03 as seed ortholog is 99%.
Bootstrap support for B3L4Y4 as seed ortholog is 99%.

Group of orthologs #407. Best score 185 bits
Score difference with first non-orthologous sequence - L.major:185 P.knowlesi:185

Q4Q3M1              	100.00%		B3L734              	100.00%
Bootstrap support for Q4Q3M1 as seed ortholog is 100%.
Bootstrap support for B3L734 as seed ortholog is 100%.

Group of orthologs #408. Best score 184 bits
Score difference with first non-orthologous sequence - L.major:184 P.knowlesi:184

Q9NE83              	100.00%		B3L8H9              	100.00%
E9AF23              	100.00%		
Bootstrap support for Q9NE83 as seed ortholog is 100%.
Bootstrap support for E9AF23 as seed ortholog is 100%.
Bootstrap support for B3L8H9 as seed ortholog is 100%.

Group of orthologs #409. Best score 184 bits
Score difference with first non-orthologous sequence - L.major:184 P.knowlesi:184

Q4QGW3              	100.00%		B3L443              	100.00%
Bootstrap support for Q4QGW3 as seed ortholog is 100%.
Bootstrap support for B3L443 as seed ortholog is 100%.

Group of orthologs #410. Best score 184 bits
Score difference with first non-orthologous sequence - L.major:184 P.knowlesi:12

Q4QA42              	100.00%		B3LB86              	100.00%
Bootstrap support for Q4QA42 as seed ortholog is 100%.
Bootstrap support for B3LB86 as seed ortholog is 90%.

Group of orthologs #411. Best score 183 bits
Score difference with first non-orthologous sequence - L.major:32 P.knowlesi:53

E9AEJ0              	100.00%		B3L9Z7              	100.00%
Bootstrap support for E9AEJ0 as seed ortholog is 96%.
Bootstrap support for B3L9Z7 as seed ortholog is 94%.

Group of orthologs #412. Best score 183 bits
Score difference with first non-orthologous sequence - L.major:183 P.knowlesi:183

Q4QDV9              	100.00%		B3KZC4              	100.00%
Bootstrap support for Q4QDV9 as seed ortholog is 100%.
Bootstrap support for B3KZC4 as seed ortholog is 100%.

Group of orthologs #413. Best score 183 bits
Score difference with first non-orthologous sequence - L.major:107 P.knowlesi:183

Q4Q9H4              	100.00%		B3L4C5              	100.00%
Bootstrap support for Q4Q9H4 as seed ortholog is 99%.
Bootstrap support for B3L4C5 as seed ortholog is 100%.

Group of orthologs #414. Best score 182 bits
Score difference with first non-orthologous sequence - L.major:182 P.knowlesi:182

Q4QCD7              	100.00%		B3L1T8              	100.00%
Bootstrap support for Q4QCD7 as seed ortholog is 100%.
Bootstrap support for B3L1T8 as seed ortholog is 100%.

Group of orthologs #415. Best score 181 bits
Score difference with first non-orthologous sequence - L.major:181 P.knowlesi:181

Q4FX34              	100.00%		B3L0V6              	100.00%
Q4QAU4              	10.71%		
Bootstrap support for Q4FX34 as seed ortholog is 100%.
Bootstrap support for B3L0V6 as seed ortholog is 100%.

Group of orthologs #416. Best score 181 bits
Score difference with first non-orthologous sequence - L.major:181 P.knowlesi:181

Q4Q859              	100.00%		B3LB22              	100.00%
Bootstrap support for Q4Q859 as seed ortholog is 100%.
Bootstrap support for B3LB22 as seed ortholog is 100%.

Group of orthologs #417. Best score 180 bits
Score difference with first non-orthologous sequence - L.major:180 P.knowlesi:87

Q4QF76              	100.00%		B3LA28              	100.00%
Q4QBH2              	100.00%		B3LCE5              	100.00%
Q4QF68              	99.12%		
Q4QF80              	98.25%		
Q4QF74              	85.09%		
Bootstrap support for Q4QF76 as seed ortholog is 100%.
Bootstrap support for Q4QBH2 as seed ortholog is 100%.
Bootstrap support for B3LA28 as seed ortholog is 99%.
Bootstrap support for B3LCE5 as seed ortholog is 99%.

Group of orthologs #418. Best score 179 bits
Score difference with first non-orthologous sequence - L.major:179 P.knowlesi:92

Q4Q8K7              	100.00%		B3L789              	100.00%
Bootstrap support for Q4Q8K7 as seed ortholog is 100%.
Bootstrap support for B3L789 as seed ortholog is 99%.

Group of orthologs #419. Best score 179 bits
Score difference with first non-orthologous sequence - L.major:179 P.knowlesi:179

Q4QBV6              	100.00%		B3LA31              	100.00%
Bootstrap support for Q4QBV6 as seed ortholog is 100%.
Bootstrap support for B3LA31 as seed ortholog is 100%.

Group of orthologs #420. Best score 178 bits
Score difference with first non-orthologous sequence - L.major:178 P.knowlesi:178

O97209              	100.00%		B3L4N0              	100.00%
Bootstrap support for O97209 as seed ortholog is 100%.
Bootstrap support for B3L4N0 as seed ortholog is 100%.

Group of orthologs #421. Best score 178 bits
Score difference with first non-orthologous sequence - L.major:178 P.knowlesi:178

Q4Q6P1              	100.00%		B3L103              	100.00%
Bootstrap support for Q4Q6P1 as seed ortholog is 100%.
Bootstrap support for B3L103 as seed ortholog is 100%.

Group of orthologs #422. Best score 177 bits
Score difference with first non-orthologous sequence - L.major:80 P.knowlesi:177

Q4Q0R0              	100.00%		B3L7E2              	100.00%
Bootstrap support for Q4Q0R0 as seed ortholog is 43%.
Alternative seed ortholog is Q4Q2U9 (80 bits away from this cluster)
Bootstrap support for B3L7E2 as seed ortholog is 100%.

Group of orthologs #423. Best score 177 bits
Score difference with first non-orthologous sequence - L.major:177 P.knowlesi:177

Q4Q561              	100.00%		B3L623              	100.00%
Bootstrap support for Q4Q561 as seed ortholog is 100%.
Bootstrap support for B3L623 as seed ortholog is 100%.

Group of orthologs #424. Best score 177 bits
Score difference with first non-orthologous sequence - L.major:177 P.knowlesi:177

Q4QHE5              	100.00%		B3LCG6              	100.00%
Bootstrap support for Q4QHE5 as seed ortholog is 100%.
Bootstrap support for B3LCG6 as seed ortholog is 100%.

Group of orthologs #425. Best score 176 bits
Score difference with first non-orthologous sequence - L.major:176 P.knowlesi:176

E9AE83              	100.00%		B3LCS1              	100.00%
Bootstrap support for E9AE83 as seed ortholog is 100%.
Bootstrap support for B3LCS1 as seed ortholog is 100%.

Group of orthologs #426. Best score 175 bits
Score difference with first non-orthologous sequence - L.major:175 P.knowlesi:175

Q4Q431              	100.00%		B3LCI8              	100.00%
E9AFJ2              	7.95%		
Bootstrap support for Q4Q431 as seed ortholog is 100%.
Bootstrap support for B3LCI8 as seed ortholog is 100%.

Group of orthologs #427. Best score 175 bits
Score difference with first non-orthologous sequence - L.major:175 P.knowlesi:175

Q4Q969              	100.00%		B3KZD2              	100.00%
Bootstrap support for Q4Q969 as seed ortholog is 100%.
Bootstrap support for B3KZD2 as seed ortholog is 100%.

Group of orthologs #428. Best score 175 bits
Score difference with first non-orthologous sequence - L.major:175 P.knowlesi:175

Q4QF12              	100.00%		B3L1Y5              	100.00%
Bootstrap support for Q4QF12 as seed ortholog is 100%.
Bootstrap support for B3L1Y5 as seed ortholog is 100%.

Group of orthologs #429. Best score 175 bits
Score difference with first non-orthologous sequence - L.major:175 P.knowlesi:175

Q4QBV0              	100.00%		B3LBZ3              	100.00%
Bootstrap support for Q4QBV0 as seed ortholog is 100%.
Bootstrap support for B3LBZ3 as seed ortholog is 100%.

Group of orthologs #430. Best score 175 bits
Score difference with first non-orthologous sequence - L.major:175 P.knowlesi:175

Q4QI30              	100.00%		B3L7Q6              	100.00%
Bootstrap support for Q4QI30 as seed ortholog is 100%.
Bootstrap support for B3L7Q6 as seed ortholog is 100%.

Group of orthologs #431. Best score 174 bits
Score difference with first non-orthologous sequence - L.major:174 P.knowlesi:174

Q4Q0M6              	100.00%		B3L0V2              	100.00%
Bootstrap support for Q4Q0M6 as seed ortholog is 100%.
Bootstrap support for B3L0V2 as seed ortholog is 100%.

Group of orthologs #432. Best score 174 bits
Score difference with first non-orthologous sequence - L.major:174 P.knowlesi:174

Q4QDZ4              	100.00%		B3LAL0              	100.00%
Bootstrap support for Q4QDZ4 as seed ortholog is 100%.
Bootstrap support for B3LAL0 as seed ortholog is 100%.

Group of orthologs #433. Best score 173 bits
Score difference with first non-orthologous sequence - L.major:173 P.knowlesi:173

Q4QEW6              	100.00%		B3L8F0              	100.00%
Bootstrap support for Q4QEW6 as seed ortholog is 100%.
Bootstrap support for B3L8F0 as seed ortholog is 100%.

Group of orthologs #434. Best score 172 bits
Score difference with first non-orthologous sequence - L.major:95 P.knowlesi:118

E9ACB4              	100.00%		B3L2G9              	100.00%
Bootstrap support for E9ACB4 as seed ortholog is 99%.
Bootstrap support for B3L2G9 as seed ortholog is 100%.

Group of orthologs #435. Best score 171 bits
Score difference with first non-orthologous sequence - L.major:171 P.knowlesi:171

Q4Q2R0              	100.00%		B3KZH6              	100.00%
Bootstrap support for Q4Q2R0 as seed ortholog is 100%.
Bootstrap support for B3KZH6 as seed ortholog is 100%.

Group of orthologs #436. Best score 171 bits
Score difference with first non-orthologous sequence - L.major:50 P.knowlesi:37

E9ACA1              	100.00%		B3L5Q4              	100.00%
Bootstrap support for E9ACA1 as seed ortholog is 98%.
Bootstrap support for B3L5Q4 as seed ortholog is 94%.

Group of orthologs #437. Best score 171 bits
Score difference with first non-orthologous sequence - L.major:171 P.knowlesi:103

Q4Q3Z6              	100.00%		B3L1E6              	100.00%
Bootstrap support for Q4Q3Z6 as seed ortholog is 100%.
Bootstrap support for B3L1E6 as seed ortholog is 99%.

Group of orthologs #438. Best score 171 bits
Score difference with first non-orthologous sequence - L.major:171 P.knowlesi:171

P84155              	100.00%		B3L5M8              	100.00%
Bootstrap support for P84155 as seed ortholog is 100%.
Bootstrap support for B3L5M8 as seed ortholog is 100%.

Group of orthologs #439. Best score 171 bits
Score difference with first non-orthologous sequence - L.major:171 P.knowlesi:171

Q4Q116              	100.00%		B3LCU5              	100.00%
Bootstrap support for Q4Q116 as seed ortholog is 100%.
Bootstrap support for B3LCU5 as seed ortholog is 100%.

Group of orthologs #440. Best score 170 bits
Score difference with first non-orthologous sequence - L.major:170 P.knowlesi:170

Q4QC03              	100.00%		B3L673              	100.00%
Q4Q8F0              	36.65%		
Q4QBG2              	10.99%		
Bootstrap support for Q4QC03 as seed ortholog is 100%.
Bootstrap support for B3L673 as seed ortholog is 100%.

Group of orthologs #441. Best score 170 bits
Score difference with first non-orthologous sequence - L.major:170 P.knowlesi:170

Q4Q6V5              	100.00%		B3L904              	100.00%
Q4QC91              	99.05%		
Bootstrap support for Q4Q6V5 as seed ortholog is 100%.
Bootstrap support for B3L904 as seed ortholog is 100%.

Group of orthologs #442. Best score 170 bits
Score difference with first non-orthologous sequence - L.major:170 P.knowlesi:170

Q4Q5P6              	100.00%		B3L3E0              	100.00%
Bootstrap support for Q4Q5P6 as seed ortholog is 100%.
Bootstrap support for B3L3E0 as seed ortholog is 100%.

Group of orthologs #443. Best score 170 bits
Score difference with first non-orthologous sequence - L.major:170 P.knowlesi:170

Q4QGW6              	100.00%		B3L0L0              	100.00%
Bootstrap support for Q4QGW6 as seed ortholog is 100%.
Bootstrap support for B3L0L0 as seed ortholog is 100%.

Group of orthologs #444. Best score 170 bits
Score difference with first non-orthologous sequence - L.major:170 P.knowlesi:58

Q4QF35              	100.00%		B3L702              	100.00%
Bootstrap support for Q4QF35 as seed ortholog is 100%.
Bootstrap support for B3L702 as seed ortholog is 94%.

Group of orthologs #445. Best score 169 bits
Score difference with first non-orthologous sequence - L.major:169 P.knowlesi:169

Q4QGV5              	100.00%		B3L408              	100.00%
Q4QGV3              	48.38%		
Q4QGV8              	43.49%		
Q4QGV7              	40.45%		
Q4QGW0              	40.45%		
E9AD74              	37.86%		
E9AD75              	37.57%		
E9ACA5              	33.69%		
Q4QFA9              	31.33%		
E9ADR4              	13.12%		
Bootstrap support for Q4QGV5 as seed ortholog is 100%.
Bootstrap support for B3L408 as seed ortholog is 100%.

Group of orthologs #446. Best score 169 bits
Score difference with first non-orthologous sequence - L.major:11 P.knowlesi:169

Q4Q416              	100.00%		B3L068              	100.00%
E9AEM6              	6.16%		B3L0H8              	100.00%
                    	       		B3L8L4              	18.87%
                    	       		B3L498              	14.64%
Bootstrap support for Q4Q416 as seed ortholog is 57%.
Alternative seed ortholog is E9ACW7 (11 bits away from this cluster)
Bootstrap support for B3L068 as seed ortholog is 100%.
Bootstrap support for B3L0H8 as seed ortholog is 100%.

Group of orthologs #447. Best score 169 bits
Score difference with first non-orthologous sequence - L.major:169 P.knowlesi:169

Q4QAA9              	100.00%		B3L698              	100.00%
Bootstrap support for Q4QAA9 as seed ortholog is 100%.
Bootstrap support for B3L698 as seed ortholog is 100%.

Group of orthologs #448. Best score 169 bits
Score difference with first non-orthologous sequence - L.major:169 P.knowlesi:169

Q4QCN7              	100.00%		B3L435              	100.00%
Bootstrap support for Q4QCN7 as seed ortholog is 100%.
Bootstrap support for B3L435 as seed ortholog is 100%.

Group of orthologs #449. Best score 168 bits
Score difference with first non-orthologous sequence - L.major:168 P.knowlesi:168

E9AEK9              	100.00%		B3LAK3              	100.00%
Bootstrap support for E9AEK9 as seed ortholog is 100%.
Bootstrap support for B3LAK3 as seed ortholog is 100%.

Group of orthologs #450. Best score 168 bits
Score difference with first non-orthologous sequence - L.major:168 P.knowlesi:168

Q4Q176              	100.00%		B3LDE8              	100.00%
Bootstrap support for Q4Q176 as seed ortholog is 100%.
Bootstrap support for B3LDE8 as seed ortholog is 100%.

Group of orthologs #451. Best score 168 bits
Score difference with first non-orthologous sequence - L.major:168 P.knowlesi:168

Q4QDQ1              	100.00%		B3L549              	100.00%
Bootstrap support for Q4QDQ1 as seed ortholog is 100%.
Bootstrap support for B3L549 as seed ortholog is 100%.

Group of orthologs #452. Best score 168 bits
Score difference with first non-orthologous sequence - L.major:168 P.knowlesi:168

Q4QB38              	100.00%		B3LDF7              	100.00%
Bootstrap support for Q4QB38 as seed ortholog is 100%.
Bootstrap support for B3LDF7 as seed ortholog is 100%.

Group of orthologs #453. Best score 166 bits
Score difference with first non-orthologous sequence - L.major:166 P.knowlesi:62

E9AF07              	100.00%		B3L4U7              	100.00%
Q4QFQ0              	7.14%		
Bootstrap support for E9AF07 as seed ortholog is 100%.
Bootstrap support for B3L4U7 as seed ortholog is 92%.

Group of orthologs #454. Best score 166 bits
Score difference with first non-orthologous sequence - L.major:166 P.knowlesi:166

Q4Q5L3              	100.00%		B3L2A7              	100.00%
Bootstrap support for Q4Q5L3 as seed ortholog is 100%.
Bootstrap support for B3L2A7 as seed ortholog is 100%.

Group of orthologs #455. Best score 165 bits
Score difference with first non-orthologous sequence - L.major:165 P.knowlesi:165

E9ACP3              	100.00%		B3KZR6              	100.00%
Bootstrap support for E9ACP3 as seed ortholog is 100%.
Bootstrap support for B3KZR6 as seed ortholog is 100%.

Group of orthologs #456. Best score 165 bits
Score difference with first non-orthologous sequence - L.major:165 P.knowlesi:165

E9ACZ8              	100.00%		B3LCM5              	100.00%
Bootstrap support for E9ACZ8 as seed ortholog is 100%.
Bootstrap support for B3LCM5 as seed ortholog is 100%.

Group of orthologs #457. Best score 165 bits
Score difference with first non-orthologous sequence - L.major:165 P.knowlesi:165

Q4QIS4              	100.00%		B3L191              	100.00%
Bootstrap support for Q4QIS4 as seed ortholog is 100%.
Bootstrap support for B3L191 as seed ortholog is 100%.

Group of orthologs #458. Best score 164 bits
Score difference with first non-orthologous sequence - L.major:164 P.knowlesi:164

E9AFH8              	100.00%		B3L963              	100.00%
Bootstrap support for E9AFH8 as seed ortholog is 100%.
Bootstrap support for B3L963 as seed ortholog is 100%.

Group of orthologs #459. Best score 164 bits
Score difference with first non-orthologous sequence - L.major:76 P.knowlesi:106

Q4QAR5              	100.00%		B3L0V4              	100.00%
Bootstrap support for Q4QAR5 as seed ortholog is 94%.
Bootstrap support for B3L0V4 as seed ortholog is 99%.

Group of orthologs #460. Best score 163 bits
Score difference with first non-orthologous sequence - L.major:9 P.knowlesi:163

E9AFW7              	100.00%		B3L3N6              	100.00%
Bootstrap support for E9AFW7 as seed ortholog is 61%.
Alternative seed ortholog is Q4QEY2 (9 bits away from this cluster)
Bootstrap support for B3L3N6 as seed ortholog is 100%.

Group of orthologs #461. Best score 163 bits
Score difference with first non-orthologous sequence - L.major:163 P.knowlesi:163

Q4Q6S2              	100.00%		B3L782              	100.00%
Bootstrap support for Q4Q6S2 as seed ortholog is 100%.
Bootstrap support for B3L782 as seed ortholog is 100%.

Group of orthologs #462. Best score 161 bits
Score difference with first non-orthologous sequence - L.major:161 P.knowlesi:161

Q4Q7H4              	100.00%		B3L1A5              	100.00%
Bootstrap support for Q4Q7H4 as seed ortholog is 100%.
Bootstrap support for B3L1A5 as seed ortholog is 100%.

Group of orthologs #463. Best score 161 bits
Score difference with first non-orthologous sequence - L.major:161 P.knowlesi:161

Q4QBK9              	100.00%		B3L0W6              	100.00%
Bootstrap support for Q4QBK9 as seed ortholog is 100%.
Bootstrap support for B3L0W6 as seed ortholog is 100%.

Group of orthologs #464. Best score 160 bits
Score difference with first non-orthologous sequence - L.major:160 P.knowlesi:160

Q4QI67              	100.00%		B3L4V5              	100.00%
Q4QD68              	100.00%		B3L4V4              	100.00%
Q4QI62              	99.64%		B3L4V3              	60.46%
Q4QI64              	99.28%		
Q4QI65              	99.10%		
Q4QI61              	98.55%		
Q4QI66              	98.19%		
Q4QI68              	96.93%		
Bootstrap support for Q4QI67 as seed ortholog is 100%.
Bootstrap support for Q4QD68 as seed ortholog is 100%.
Bootstrap support for B3L4V5 as seed ortholog is 100%.
Bootstrap support for B3L4V4 as seed ortholog is 100%.

Group of orthologs #465. Best score 160 bits
Score difference with first non-orthologous sequence - L.major:58 P.knowlesi:60

Q4QBT6              	100.00%		B3LC83              	100.00%
                    	       		B3L412              	11.11%
Bootstrap support for Q4QBT6 as seed ortholog is 99%.
Bootstrap support for B3LC83 as seed ortholog is 99%.

Group of orthologs #466. Best score 160 bits
Score difference with first non-orthologous sequence - L.major:160 P.knowlesi:160

E9AFW0              	100.00%		B3KZ72              	100.00%
Bootstrap support for E9AFW0 as seed ortholog is 100%.
Bootstrap support for B3KZ72 as seed ortholog is 100%.

Group of orthologs #467. Best score 160 bits
Score difference with first non-orthologous sequence - L.major:160 P.knowlesi:160

Q4QC33              	100.00%		B3L1H1              	100.00%
Bootstrap support for Q4QC33 as seed ortholog is 100%.
Bootstrap support for B3L1H1 as seed ortholog is 100%.

Group of orthologs #468. Best score 160 bits
Score difference with first non-orthologous sequence - L.major:160 P.knowlesi:160

Q4QJ65              	100.00%		B3L684              	100.00%
Bootstrap support for Q4QJ65 as seed ortholog is 100%.
Bootstrap support for B3L684 as seed ortholog is 100%.

Group of orthologs #469. Best score 159 bits
Score difference with first non-orthologous sequence - L.major:159 P.knowlesi:159

E9AFI3              	100.00%		B3L0U1              	100.00%
Bootstrap support for E9AFI3 as seed ortholog is 100%.
Bootstrap support for B3L0U1 as seed ortholog is 100%.

Group of orthologs #470. Best score 159 bits
Score difference with first non-orthologous sequence - L.major:159 P.knowlesi:101

Q4Q9R2              	100.00%		B3L5G8              	100.00%
Bootstrap support for Q4Q9R2 as seed ortholog is 100%.
Bootstrap support for B3L5G8 as seed ortholog is 99%.

Group of orthologs #471. Best score 159 bits
Score difference with first non-orthologous sequence - L.major:159 P.knowlesi:159

Q4Q7Z4              	100.00%		B3LBE4              	100.00%
Bootstrap support for Q4Q7Z4 as seed ortholog is 100%.
Bootstrap support for B3LBE4 as seed ortholog is 100%.

Group of orthologs #472. Best score 158 bits
Score difference with first non-orthologous sequence - L.major:158 P.knowlesi:158

Q4Q134              	100.00%		B3L6W6              	100.00%
Q4Q135              	100.00%		
Bootstrap support for Q4Q134 as seed ortholog is 100%.
Bootstrap support for Q4Q135 as seed ortholog is 100%.
Bootstrap support for B3L6W6 as seed ortholog is 100%.

Group of orthologs #473. Best score 158 bits
Score difference with first non-orthologous sequence - L.major:43 P.knowlesi:30

Q4QDX7              	100.00%		B3LBW6              	100.00%
Q4QIJ7              	57.54%		
Bootstrap support for Q4QDX7 as seed ortholog is 88%.
Bootstrap support for B3LBW6 as seed ortholog is 83%.

Group of orthologs #474. Best score 158 bits
Score difference with first non-orthologous sequence - L.major:158 P.knowlesi:158

Q4QAN4              	100.00%		B3L0G0              	100.00%
Bootstrap support for Q4QAN4 as seed ortholog is 100%.
Bootstrap support for B3L0G0 as seed ortholog is 100%.

Group of orthologs #475. Best score 158 bits
Score difference with first non-orthologous sequence - L.major:158 P.knowlesi:158

Q4QG98              	100.00%		B3L8I5              	100.00%
Bootstrap support for Q4QG98 as seed ortholog is 100%.
Bootstrap support for B3L8I5 as seed ortholog is 100%.

Group of orthologs #476. Best score 157 bits
Score difference with first non-orthologous sequence - L.major:157 P.knowlesi:157

E9AFK0              	100.00%		B3L7M5              	100.00%
Bootstrap support for E9AFK0 as seed ortholog is 100%.
Bootstrap support for B3L7M5 as seed ortholog is 100%.

Group of orthologs #477. Best score 156 bits
Score difference with first non-orthologous sequence - L.major:72 P.knowlesi:67

Q4Q5I6              	100.00%		B3L2M7              	100.00%
Bootstrap support for Q4Q5I6 as seed ortholog is 99%.
Bootstrap support for B3L2M7 as seed ortholog is 99%.

Group of orthologs #478. Best score 156 bits
Score difference with first non-orthologous sequence - L.major:156 P.knowlesi:156

Q4QIP1              	100.00%		B3LAD9              	100.00%
Bootstrap support for Q4QIP1 as seed ortholog is 100%.
Bootstrap support for B3LAD9 as seed ortholog is 100%.

Group of orthologs #479. Best score 155 bits
Score difference with first non-orthologous sequence - L.major:155 P.knowlesi:155

Q4Q5P2              	100.00%		B3L879              	100.00%
Q4QAX6              	100.00%		
Bootstrap support for Q4Q5P2 as seed ortholog is 100%.
Bootstrap support for Q4QAX6 as seed ortholog is 100%.
Bootstrap support for B3L879 as seed ortholog is 100%.

Group of orthologs #480. Best score 155 bits
Score difference with first non-orthologous sequence - L.major:155 P.knowlesi:155

Q4QD94              	100.00%		B3L1B5              	100.00%
Bootstrap support for Q4QD94 as seed ortholog is 100%.
Bootstrap support for B3L1B5 as seed ortholog is 100%.

Group of orthologs #481. Best score 155 bits
Score difference with first non-orthologous sequence - L.major:155 P.knowlesi:155

Q9NE54              	100.00%		B3L4G2              	100.00%
Bootstrap support for Q9NE54 as seed ortholog is 100%.
Bootstrap support for B3L4G2 as seed ortholog is 100%.

Group of orthologs #482. Best score 155 bits
Score difference with first non-orthologous sequence - L.major:155 P.knowlesi:155

Q4QCT3              	100.00%		B3LCG3              	100.00%
Bootstrap support for Q4QCT3 as seed ortholog is 100%.
Bootstrap support for B3LCG3 as seed ortholog is 100%.

Group of orthologs #483. Best score 154 bits
Score difference with first non-orthologous sequence - L.major:154 P.knowlesi:154

Q4Q4E7              	100.00%		B3L4M9              	100.00%
Bootstrap support for Q4Q4E7 as seed ortholog is 100%.
Bootstrap support for B3L4M9 as seed ortholog is 100%.

Group of orthologs #484. Best score 154 bits
Score difference with first non-orthologous sequence - L.major:154 P.knowlesi:154

Q4QEP9              	100.00%		B3L5F7              	100.00%
Bootstrap support for Q4QEP9 as seed ortholog is 100%.
Bootstrap support for B3L5F7 as seed ortholog is 100%.

Group of orthologs #485. Best score 154 bits
Score difference with first non-orthologous sequence - L.major:70 P.knowlesi:154

Q4QIK2              	100.00%		B3L7Z4              	100.00%
Bootstrap support for Q4QIK2 as seed ortholog is 99%.
Bootstrap support for B3L7Z4 as seed ortholog is 100%.

Group of orthologs #486. Best score 153 bits
Score difference with first non-orthologous sequence - L.major:27 P.knowlesi:58

Q4QEV9              	100.00%		B3L7M9              	100.00%
Q4QHB5              	100.00%		B3L7V1              	100.00%
Bootstrap support for Q4QEV9 as seed ortholog is 90%.
Bootstrap support for Q4QHB5 as seed ortholog is 91%.
Bootstrap support for B3L7M9 as seed ortholog is 99%.
Bootstrap support for B3L7V1 as seed ortholog is 99%.

Group of orthologs #487. Best score 153 bits
Score difference with first non-orthologous sequence - L.major:153 P.knowlesi:17

Q4Q0F2              	100.00%		B3L8X2              	100.00%
Q4Q0F3              	12.28%		
Bootstrap support for Q4Q0F2 as seed ortholog is 100%.
Bootstrap support for B3L8X2 as seed ortholog is 68%.
Alternative seed ortholog is B3L4U3 (17 bits away from this cluster)

Group of orthologs #488. Best score 153 bits
Score difference with first non-orthologous sequence - L.major:153 P.knowlesi:153

Q4Q7F0              	100.00%		B3L1E5              	100.00%
Bootstrap support for Q4Q7F0 as seed ortholog is 100%.
Bootstrap support for B3L1E5 as seed ortholog is 100%.

Group of orthologs #489. Best score 153 bits
Score difference with first non-orthologous sequence - L.major:153 P.knowlesi:153

Q4Q091              	100.00%		B3LBX9              	100.00%
Bootstrap support for Q4Q091 as seed ortholog is 100%.
Bootstrap support for B3LBX9 as seed ortholog is 100%.

Group of orthologs #490. Best score 153 bits
Score difference with first non-orthologous sequence - L.major:153 P.knowlesi:77

Q4Q4F2              	100.00%		B3LCK9              	100.00%
Bootstrap support for Q4Q4F2 as seed ortholog is 100%.
Bootstrap support for B3LCK9 as seed ortholog is 97%.

Group of orthologs #491. Best score 153 bits
Score difference with first non-orthologous sequence - L.major:28 P.knowlesi:81

Q4QFG7              	100.00%		B3L5J3              	100.00%
Bootstrap support for Q4QFG7 as seed ortholog is 72%.
Alternative seed ortholog is Q4Q7S1 (28 bits away from this cluster)
Bootstrap support for B3L5J3 as seed ortholog is 99%.

Group of orthologs #492. Best score 153 bits
Score difference with first non-orthologous sequence - L.major:153 P.knowlesi:153

Q4QH62              	100.00%		B3L5W9              	100.00%
Bootstrap support for Q4QH62 as seed ortholog is 100%.
Bootstrap support for B3L5W9 as seed ortholog is 100%.

Group of orthologs #493. Best score 152 bits
Score difference with first non-orthologous sequence - L.major:152 P.knowlesi:152

Q4Q0I6              	100.00%		B3L2B8              	100.00%
Bootstrap support for Q4Q0I6 as seed ortholog is 100%.
Bootstrap support for B3L2B8 as seed ortholog is 100%.

Group of orthologs #494. Best score 152 bits
Score difference with first non-orthologous sequence - L.major:152 P.knowlesi:152

Q4QAT2              	100.00%		B3LBH0              	100.00%
Bootstrap support for Q4QAT2 as seed ortholog is 100%.
Bootstrap support for B3LBH0 as seed ortholog is 100%.

Group of orthologs #495. Best score 152 bits
Score difference with first non-orthologous sequence - L.major:152 P.knowlesi:152

Q4QFY6              	100.00%		B3L745              	100.00%
Bootstrap support for Q4QFY6 as seed ortholog is 100%.
Bootstrap support for B3L745 as seed ortholog is 100%.

Group of orthologs #496. Best score 151 bits
Score difference with first non-orthologous sequence - L.major:151 P.knowlesi:151

E9AFI6              	100.00%		B3L9M4              	100.00%
Bootstrap support for E9AFI6 as seed ortholog is 100%.
Bootstrap support for B3L9M4 as seed ortholog is 100%.

Group of orthologs #497. Best score 150 bits
Score difference with first non-orthologous sequence - L.major:150 P.knowlesi:150

Q4QEG6              	100.00%		B3L3Z2              	100.00%
Bootstrap support for Q4QEG6 as seed ortholog is 100%.
Bootstrap support for B3L3Z2 as seed ortholog is 100%.

Group of orthologs #498. Best score 149 bits
Score difference with first non-orthologous sequence - L.major:149 P.knowlesi:149

E9ACG6              	100.00%		B3L4Z6              	100.00%
Bootstrap support for E9ACG6 as seed ortholog is 100%.
Bootstrap support for B3L4Z6 as seed ortholog is 100%.

Group of orthologs #499. Best score 149 bits
Score difference with first non-orthologous sequence - L.major:149 P.knowlesi:149

Q4Q1W0              	100.00%		B3L1J9              	100.00%
Bootstrap support for Q4Q1W0 as seed ortholog is 100%.
Bootstrap support for B3L1J9 as seed ortholog is 100%.

Group of orthologs #500. Best score 149 bits
Score difference with first non-orthologous sequence - L.major:149 P.knowlesi:149

E9AEP5              	100.00%		B3L8I0              	100.00%
Bootstrap support for E9AEP5 as seed ortholog is 100%.
Bootstrap support for B3L8I0 as seed ortholog is 100%.

Group of orthologs #501. Best score 149 bits
Score difference with first non-orthologous sequence - L.major:149 P.knowlesi:149

Q4Q6Q0              	100.00%		B3L5Y9              	100.00%
Bootstrap support for Q4Q6Q0 as seed ortholog is 100%.
Bootstrap support for B3L5Y9 as seed ortholog is 100%.

Group of orthologs #502. Best score 149 bits
Score difference with first non-orthologous sequence - L.major:14 P.knowlesi:51

Q4QAV6              	100.00%		B3LD60              	100.00%
Bootstrap support for Q4QAV6 as seed ortholog is 60%.
Alternative seed ortholog is Q4Q552 (14 bits away from this cluster)
Bootstrap support for B3LD60 as seed ortholog is 96%.

Group of orthologs #503. Best score 148 bits
Score difference with first non-orthologous sequence - L.major:148 P.knowlesi:148

E9ADN3              	100.00%		B3L5Y6              	100.00%
Bootstrap support for E9ADN3 as seed ortholog is 100%.
Bootstrap support for B3L5Y6 as seed ortholog is 100%.

Group of orthologs #504. Best score 148 bits
Score difference with first non-orthologous sequence - L.major:36 P.knowlesi:26

Q9N2N1              	100.00%		B3L807              	100.00%
Bootstrap support for Q9N2N1 as seed ortholog is 80%.
Bootstrap support for B3L807 as seed ortholog is 81%.

Group of orthologs #505. Best score 147 bits
Score difference with first non-orthologous sequence - L.major:147 P.knowlesi:147

Q4Q8Q9              	100.00%		B3KZJ5              	100.00%
Bootstrap support for Q4Q8Q9 as seed ortholog is 100%.
Bootstrap support for B3KZJ5 as seed ortholog is 100%.

Group of orthologs #506. Best score 147 bits
Score difference with first non-orthologous sequence - L.major:147 P.knowlesi:147

Q4Q5L4              	100.00%		B3L9F2              	100.00%
Bootstrap support for Q4Q5L4 as seed ortholog is 100%.
Bootstrap support for B3L9F2 as seed ortholog is 100%.

Group of orthologs #507. Best score 147 bits
Score difference with first non-orthologous sequence - L.major:147 P.knowlesi:67

Q4QGS1              	100.00%		B3KZZ3              	100.00%
Bootstrap support for Q4QGS1 as seed ortholog is 100%.
Bootstrap support for B3KZZ3 as seed ortholog is 97%.

Group of orthologs #508. Best score 146 bits
Score difference with first non-orthologous sequence - L.major:57 P.knowlesi:146

Q4QFR6              	100.00%		B3KZI4              	100.00%
Q4QFR5              	57.46%		
Q4QFR3              	24.34%		
Q4QFR4              	14.93%		
Q4QFQ9              	13.09%		
Q4QFR0              	7.98%		
Bootstrap support for Q4QFR6 as seed ortholog is 93%.
Bootstrap support for B3KZI4 as seed ortholog is 100%.

Group of orthologs #509. Best score 146 bits
Score difference with first non-orthologous sequence - L.major:146 P.knowlesi:29

Q4Q0Q3              	100.00%		B3L4I9              	100.00%
Bootstrap support for Q4Q0Q3 as seed ortholog is 100%.
Bootstrap support for B3L4I9 as seed ortholog is 85%.

Group of orthologs #510. Best score 146 bits
Score difference with first non-orthologous sequence - L.major:146 P.knowlesi:146

Q4Q582              	100.00%		B3L9X4              	100.00%
Bootstrap support for Q4Q582 as seed ortholog is 100%.
Bootstrap support for B3L9X4 as seed ortholog is 100%.

Group of orthologs #511. Best score 145 bits
Score difference with first non-orthologous sequence - L.major:145 P.knowlesi:145

Q4Q3B9              	100.00%		B3L3H1              	100.00%
Q4QFG2              	100.00%		
Bootstrap support for Q4Q3B9 as seed ortholog is 100%.
Bootstrap support for Q4QFG2 as seed ortholog is 100%.
Bootstrap support for B3L3H1 as seed ortholog is 100%.

Group of orthologs #512. Best score 144 bits
Score difference with first non-orthologous sequence - L.major:144 P.knowlesi:144

E9ADU8              	100.00%		B3L9J5              	100.00%
Bootstrap support for E9ADU8 as seed ortholog is 100%.
Bootstrap support for B3L9J5 as seed ortholog is 100%.

Group of orthologs #513. Best score 144 bits
Score difference with first non-orthologous sequence - L.major:144 P.knowlesi:144

Q4QJ81              	100.00%		B3L291              	100.00%
Bootstrap support for Q4QJ81 as seed ortholog is 100%.
Bootstrap support for B3L291 as seed ortholog is 100%.

Group of orthologs #514. Best score 144 bits
Score difference with first non-orthologous sequence - L.major:144 P.knowlesi:144

Q4QGD8              	100.00%		B3LCL9              	100.00%
Bootstrap support for Q4QGD8 as seed ortholog is 100%.
Bootstrap support for B3LCL9 as seed ortholog is 100%.

Group of orthologs #515. Best score 143 bits
Score difference with first non-orthologous sequence - L.major:143 P.knowlesi:143

Q4Q6T2              	100.00%		B3L0E1              	100.00%
Bootstrap support for Q4Q6T2 as seed ortholog is 100%.
Bootstrap support for B3L0E1 as seed ortholog is 100%.

Group of orthologs #516. Best score 143 bits
Score difference with first non-orthologous sequence - L.major:143 P.knowlesi:143

Q4QEY9              	100.00%		B3L2G0              	100.00%
Bootstrap support for Q4QEY9 as seed ortholog is 100%.
Bootstrap support for B3L2G0 as seed ortholog is 100%.

Group of orthologs #517. Best score 143 bits
Score difference with first non-orthologous sequence - L.major:143 P.knowlesi:143

Q4Q9A5              	100.00%		B3LC68              	100.00%
Bootstrap support for Q4Q9A5 as seed ortholog is 100%.
Bootstrap support for B3LC68 as seed ortholog is 100%.

Group of orthologs #518. Best score 143 bits
Score difference with first non-orthologous sequence - L.major:143 P.knowlesi:143

Q4QI04              	100.00%		B3L7I6              	100.00%
Bootstrap support for Q4QI04 as seed ortholog is 100%.
Bootstrap support for B3L7I6 as seed ortholog is 100%.

Group of orthologs #519. Best score 143 bits
Score difference with first non-orthologous sequence - L.major:143 P.knowlesi:143

Q8ISS8              	100.00%		B3L7H0              	100.00%
Bootstrap support for Q8ISS8 as seed ortholog is 100%.
Bootstrap support for B3L7H0 as seed ortholog is 100%.

Group of orthologs #520. Best score 142 bits
Score difference with first non-orthologous sequence - L.major:142 P.knowlesi:142

Q4Q7R0              	100.00%		B3L4P4              	100.00%
Bootstrap support for Q4Q7R0 as seed ortholog is 100%.
Bootstrap support for B3L4P4 as seed ortholog is 100%.

Group of orthologs #521. Best score 142 bits
Score difference with first non-orthologous sequence - L.major:142 P.knowlesi:142

Q4QAT9              	100.00%		B3L4X4              	100.00%
Bootstrap support for Q4QAT9 as seed ortholog is 100%.
Bootstrap support for B3L4X4 as seed ortholog is 100%.

Group of orthologs #522. Best score 142 bits
Score difference with first non-orthologous sequence - L.major:142 P.knowlesi:142

Q4QA21              	100.00%		B3LB29              	100.00%
Bootstrap support for Q4QA21 as seed ortholog is 100%.
Bootstrap support for B3LB29 as seed ortholog is 100%.

Group of orthologs #523. Best score 142 bits
Score difference with first non-orthologous sequence - L.major:142 P.knowlesi:142

Q4QIS5              	100.00%		B3LA90              	100.00%
Bootstrap support for Q4QIS5 as seed ortholog is 100%.
Bootstrap support for B3LA90 as seed ortholog is 100%.

Group of orthologs #524. Best score 141 bits
Score difference with first non-orthologous sequence - L.major:141 P.knowlesi:141

Q4Q3T0              	100.00%		B3L9V6              	100.00%
Q4QH17              	29.08%		
Q4QH18              	16.98%		
Bootstrap support for Q4Q3T0 as seed ortholog is 100%.
Bootstrap support for B3L9V6 as seed ortholog is 100%.

Group of orthologs #525. Best score 140 bits
Score difference with first non-orthologous sequence - L.major:140 P.knowlesi:140

E9AF57              	100.00%		B3L7D0              	100.00%
Bootstrap support for E9AF57 as seed ortholog is 100%.
Bootstrap support for B3L7D0 as seed ortholog is 100%.

Group of orthologs #526. Best score 140 bits
Score difference with first non-orthologous sequence - L.major:140 P.knowlesi:140

Q4QAY6              	100.00%		B3L672              	100.00%
Bootstrap support for Q4QAY6 as seed ortholog is 100%.
Bootstrap support for B3L672 as seed ortholog is 100%.

Group of orthologs #527. Best score 140 bits
Score difference with first non-orthologous sequence - L.major:140 P.knowlesi:140

Q4QE43              	100.00%		B3L6X2              	100.00%
Bootstrap support for Q4QE43 as seed ortholog is 100%.
Bootstrap support for B3L6X2 as seed ortholog is 100%.

Group of orthologs #528. Best score 139 bits
Score difference with first non-orthologous sequence - L.major:139 P.knowlesi:139

E9AD22              	100.00%		B3L2N5              	100.00%
Bootstrap support for E9AD22 as seed ortholog is 100%.
Bootstrap support for B3L2N5 as seed ortholog is 100%.

Group of orthologs #529. Best score 139 bits
Score difference with first non-orthologous sequence - L.major:99 P.knowlesi:139

Q4Q669              	100.00%		B3LAS6              	100.00%
Bootstrap support for Q4Q669 as seed ortholog is 96%.
Bootstrap support for B3LAS6 as seed ortholog is 100%.

Group of orthologs #530. Best score 138 bits
Score difference with first non-orthologous sequence - L.major:138 P.knowlesi:138

Q4Q580              	100.00%		B3LCJ4              	100.00%
Bootstrap support for Q4Q580 as seed ortholog is 100%.
Bootstrap support for B3LCJ4 as seed ortholog is 100%.

Group of orthologs #531. Best score 138 bits
Score difference with first non-orthologous sequence - L.major:138 P.knowlesi:138

Q4QIC4              	100.00%		B3L8R9              	100.00%
Bootstrap support for Q4QIC4 as seed ortholog is 100%.
Bootstrap support for B3L8R9 as seed ortholog is 100%.

Group of orthologs #532. Best score 137 bits
Score difference with first non-orthologous sequence - L.major:19 P.knowlesi:91

Q4Q5R2              	100.00%		B3LCD2              	100.00%
Bootstrap support for Q4Q5R2 as seed ortholog is 88%.
Bootstrap support for B3LCD2 as seed ortholog is 100%.

Group of orthologs #533. Best score 137 bits
Score difference with first non-orthologous sequence - L.major:75 P.knowlesi:73

Q4QC21              	100.00%		B3L9Q0              	100.00%
Bootstrap support for Q4QC21 as seed ortholog is 99%.
Bootstrap support for B3L9Q0 as seed ortholog is 99%.

Group of orthologs #534. Best score 137 bits
Score difference with first non-orthologous sequence - L.major:137 P.knowlesi:137

Q4QFF8              	100.00%		B3LCK5              	100.00%
Bootstrap support for Q4QFF8 as seed ortholog is 100%.
Bootstrap support for B3LCK5 as seed ortholog is 100%.

Group of orthologs #535. Best score 136 bits
Score difference with first non-orthologous sequence - L.major:41 P.knowlesi:136

O97196              	100.00%		B3KZ34              	100.00%
Bootstrap support for O97196 as seed ortholog is 87%.
Bootstrap support for B3KZ34 as seed ortholog is 100%.

Group of orthologs #536. Best score 136 bits
Score difference with first non-orthologous sequence - L.major:136 P.knowlesi:136

Q4QA41              	100.00%		B3LA44              	100.00%
Bootstrap support for Q4QA41 as seed ortholog is 100%.
Bootstrap support for B3LA44 as seed ortholog is 100%.

Group of orthologs #537. Best score 136 bits
Score difference with first non-orthologous sequence - L.major:136 P.knowlesi:136

Q4Q901              	100.00%		B3LBI7              	100.00%
Bootstrap support for Q4Q901 as seed ortholog is 100%.
Bootstrap support for B3LBI7 as seed ortholog is 100%.

Group of orthologs #538. Best score 136 bits
Score difference with first non-orthologous sequence - L.major:136 P.knowlesi:136

Q4QGW1              	100.00%		B3L6U9              	100.00%
Bootstrap support for Q4QGW1 as seed ortholog is 100%.
Bootstrap support for B3L6U9 as seed ortholog is 100%.

Group of orthologs #539. Best score 136 bits
Score difference with first non-orthologous sequence - L.major:136 P.knowlesi:136

Q4QHK9              	100.00%		B3LB81              	100.00%
Bootstrap support for Q4QHK9 as seed ortholog is 100%.
Bootstrap support for B3LB81 as seed ortholog is 100%.

Group of orthologs #540. Best score 135 bits
Score difference with first non-orthologous sequence - L.major:24 P.knowlesi:135

Q4Q9E3              	100.00%		B3L2J5              	100.00%
Bootstrap support for Q4Q9E3 as seed ortholog is 74%.
Alternative seed ortholog is Q4Q9V4 (24 bits away from this cluster)
Bootstrap support for B3L2J5 as seed ortholog is 100%.

Group of orthologs #541. Best score 135 bits
Score difference with first non-orthologous sequence - L.major:135 P.knowlesi:135

Q4Q806              	100.00%		B3LD68              	100.00%
Bootstrap support for Q4Q806 as seed ortholog is 100%.
Bootstrap support for B3LD68 as seed ortholog is 100%.

Group of orthologs #542. Best score 134 bits
Score difference with first non-orthologous sequence - L.major:134 P.knowlesi:134

Q4Q2H9              	100.00%		B3LAD1              	100.00%
Q4QEX4              	100.00%		
Bootstrap support for Q4Q2H9 as seed ortholog is 100%.
Bootstrap support for Q4QEX4 as seed ortholog is 100%.
Bootstrap support for B3LAD1 as seed ortholog is 100%.

Group of orthologs #543. Best score 134 bits
Score difference with first non-orthologous sequence - L.major:134 P.knowlesi:134

Q4QAC5              	100.00%		B3L470              	100.00%
Bootstrap support for Q4QAC5 as seed ortholog is 100%.
Bootstrap support for B3L470 as seed ortholog is 100%.

Group of orthologs #544. Best score 134 bits
Score difference with first non-orthologous sequence - L.major:55 P.knowlesi:134

Q4QCL6              	100.00%		B3L418              	100.00%
Bootstrap support for Q4QCL6 as seed ortholog is 98%.
Bootstrap support for B3L418 as seed ortholog is 100%.

Group of orthologs #545. Best score 134 bits
Score difference with first non-orthologous sequence - L.major:134 P.knowlesi:134

Q4QGY9              	100.00%		B3L6K9              	100.00%
Bootstrap support for Q4QGY9 as seed ortholog is 100%.
Bootstrap support for B3L6K9 as seed ortholog is 100%.

Group of orthologs #546. Best score 134 bits
Score difference with first non-orthologous sequence - L.major:40 P.knowlesi:47

Q4QAH7              	100.00%		B3LDF0              	100.00%
Bootstrap support for Q4QAH7 as seed ortholog is 95%.
Bootstrap support for B3LDF0 as seed ortholog is 98%.

Group of orthologs #547. Best score 133 bits
Score difference with first non-orthologous sequence - L.major:133 P.knowlesi:133

E9ACZ6              	100.00%		B3L441              	100.00%
Bootstrap support for E9ACZ6 as seed ortholog is 100%.
Bootstrap support for B3L441 as seed ortholog is 100%.

Group of orthologs #548. Best score 133 bits
Score difference with first non-orthologous sequence - L.major:133 P.knowlesi:133

Q4Q0W9              	100.00%		B3L8M1              	100.00%
Bootstrap support for Q4Q0W9 as seed ortholog is 100%.
Bootstrap support for B3L8M1 as seed ortholog is 100%.

Group of orthologs #549. Best score 133 bits
Score difference with first non-orthologous sequence - L.major:133 P.knowlesi:55

Q4Q9G4              	100.00%		B3LCG7              	100.00%
Bootstrap support for Q4Q9G4 as seed ortholog is 100%.
Bootstrap support for B3LCG7 as seed ortholog is 91%.

Group of orthologs #550. Best score 132 bits
Score difference with first non-orthologous sequence - L.major:28 P.knowlesi:77

Q4Q9J9              	100.00%		B3L1H4              	100.00%
Bootstrap support for Q4Q9J9 as seed ortholog is 80%.
Bootstrap support for B3L1H4 as seed ortholog is 99%.

Group of orthologs #551. Best score 132 bits
Score difference with first non-orthologous sequence - L.major:132 P.knowlesi:132

Q4Q2Z0              	100.00%		B3L7W2              	100.00%
Bootstrap support for Q4Q2Z0 as seed ortholog is 100%.
Bootstrap support for B3L7W2 as seed ortholog is 100%.

Group of orthologs #552. Best score 132 bits
Score difference with first non-orthologous sequence - L.major:132 P.knowlesi:132

Q4Q270              	100.00%		B3LA20              	100.00%
Bootstrap support for Q4Q270 as seed ortholog is 100%.
Bootstrap support for B3LA20 as seed ortholog is 100%.

Group of orthologs #553. Best score 132 bits
Score difference with first non-orthologous sequence - L.major:132 P.knowlesi:132

Q4QII6              	100.00%		B3KYX5              	100.00%
Bootstrap support for Q4QII6 as seed ortholog is 100%.
Bootstrap support for B3KYX5 as seed ortholog is 100%.

Group of orthologs #554. Best score 131 bits
Score difference with first non-orthologous sequence - L.major:131 P.knowlesi:131

Q4QCN5              	100.00%		B3KZT0              	100.00%
Bootstrap support for Q4QCN5 as seed ortholog is 100%.
Bootstrap support for B3KZT0 as seed ortholog is 100%.

Group of orthologs #555. Best score 131 bits
Score difference with first non-orthologous sequence - L.major:131 P.knowlesi:131

Q4QCZ8              	100.00%		B3L2R8              	100.00%
Bootstrap support for Q4QCZ8 as seed ortholog is 100%.
Bootstrap support for B3L2R8 as seed ortholog is 100%.

Group of orthologs #556. Best score 131 bits
Score difference with first non-orthologous sequence - L.major:131 P.knowlesi:131

Q4Q8F5              	100.00%		B3L8A6              	100.00%
Bootstrap support for Q4Q8F5 as seed ortholog is 100%.
Bootstrap support for B3L8A6 as seed ortholog is 100%.

Group of orthologs #557. Best score 130 bits
Score difference with first non-orthologous sequence - L.major:59 P.knowlesi:130

Q4Q5S5              	100.00%		B3LD56              	100.00%
Bootstrap support for Q4Q5S5 as seed ortholog is 94%.
Bootstrap support for B3LD56 as seed ortholog is 100%.

Group of orthologs #558. Best score 129 bits
Score difference with first non-orthologous sequence - L.major:129 P.knowlesi:129

E9AFZ6              	100.00%		B3L580              	100.00%
Bootstrap support for E9AFZ6 as seed ortholog is 100%.
Bootstrap support for B3L580 as seed ortholog is 100%.

Group of orthologs #559. Best score 129 bits
Score difference with first non-orthologous sequence - L.major:129 P.knowlesi:129

Q4QEM6              	100.00%		B3L1K9              	100.00%
Bootstrap support for Q4QEM6 as seed ortholog is 100%.
Bootstrap support for B3L1K9 as seed ortholog is 100%.

Group of orthologs #560. Best score 128 bits
Score difference with first non-orthologous sequence - L.major:128 P.knowlesi:128

Q4Q2Y3              	100.00%		B3L2I9              	100.00%
Bootstrap support for Q4Q2Y3 as seed ortholog is 100%.
Bootstrap support for B3L2I9 as seed ortholog is 100%.

Group of orthologs #561. Best score 128 bits
Score difference with first non-orthologous sequence - L.major:128 P.knowlesi:128

Q4Q1E7              	100.00%		B3L4N5              	100.00%
Bootstrap support for Q4Q1E7 as seed ortholog is 100%.
Bootstrap support for B3L4N5 as seed ortholog is 100%.

Group of orthologs #562. Best score 128 bits
Score difference with first non-orthologous sequence - L.major:66 P.knowlesi:128

Q4QF32              	100.00%		B3L543              	100.00%
Bootstrap support for Q4QF32 as seed ortholog is 99%.
Bootstrap support for B3L543 as seed ortholog is 100%.

Group of orthologs #563. Best score 127 bits
Score difference with first non-orthologous sequence - L.major:127 P.knowlesi:127

E9AEK1              	100.00%		B3L1V2              	100.00%
Bootstrap support for E9AEK1 as seed ortholog is 100%.
Bootstrap support for B3L1V2 as seed ortholog is 100%.

Group of orthologs #564. Best score 127 bits
Score difference with first non-orthologous sequence - L.major:78 P.knowlesi:127

Q4QFZ6              	100.00%		B3L4D9              	100.00%
Bootstrap support for Q4QFZ6 as seed ortholog is 99%.
Bootstrap support for B3L4D9 as seed ortholog is 100%.

Group of orthologs #565. Best score 127 bits
Score difference with first non-orthologous sequence - L.major:127 P.knowlesi:127

Q4QHW5              	100.00%		B3L6C4              	100.00%
Bootstrap support for Q4QHW5 as seed ortholog is 100%.
Bootstrap support for B3L6C4 as seed ortholog is 100%.

Group of orthologs #566. Best score 126 bits
Score difference with first non-orthologous sequence - L.major:126 P.knowlesi:126

Q4Q393              	100.00%		B3L2X0              	100.00%
Bootstrap support for Q4Q393 as seed ortholog is 100%.
Bootstrap support for B3L2X0 as seed ortholog is 100%.

Group of orthologs #567. Best score 126 bits
Score difference with first non-orthologous sequence - L.major:60 P.knowlesi:126

Q4Q6R2              	100.00%		B3L5D6              	100.00%
Bootstrap support for Q4Q6R2 as seed ortholog is 95%.
Bootstrap support for B3L5D6 as seed ortholog is 100%.

Group of orthologs #568. Best score 126 bits
Score difference with first non-orthologous sequence - L.major:126 P.knowlesi:126

Q4QEL2              	100.00%		B3L544              	100.00%
Bootstrap support for Q4QEL2 as seed ortholog is 100%.
Bootstrap support for B3L544 as seed ortholog is 100%.

Group of orthologs #569. Best score 126 bits
Score difference with first non-orthologous sequence - L.major:65 P.knowlesi:126

Q4QHL1              	100.00%		B3L7E6              	100.00%
Bootstrap support for Q4QHL1 as seed ortholog is 97%.
Bootstrap support for B3L7E6 as seed ortholog is 100%.

Group of orthologs #570. Best score 125 bits
Score difference with first non-orthologous sequence - L.major:125 P.knowlesi:125

Q4QJG3              	100.00%		B3L0N8              	100.00%
Q4QAI6              	8.43%		
Bootstrap support for Q4QJG3 as seed ortholog is 100%.
Bootstrap support for B3L0N8 as seed ortholog is 100%.

Group of orthologs #571. Best score 125 bits
Score difference with first non-orthologous sequence - L.major:32 P.knowlesi:125

E9ACW8              	100.00%		B3L4B2              	100.00%
Bootstrap support for E9ACW8 as seed ortholog is 73%.
Alternative seed ortholog is Q4QHD6 (32 bits away from this cluster)
Bootstrap support for B3L4B2 as seed ortholog is 100%.

Group of orthologs #572. Best score 125 bits
Score difference with first non-orthologous sequence - L.major:125 P.knowlesi:125

Q4Q084              	100.00%		B3L4R3              	100.00%
Bootstrap support for Q4Q084 as seed ortholog is 100%.
Bootstrap support for B3L4R3 as seed ortholog is 100%.

Group of orthologs #573. Best score 125 bits
Score difference with first non-orthologous sequence - L.major:125 P.knowlesi:125

Q4QGC8              	100.00%		B3L3G4              	100.00%
Bootstrap support for Q4QGC8 as seed ortholog is 100%.
Bootstrap support for B3L3G4 as seed ortholog is 100%.

Group of orthologs #574. Best score 124 bits
Score difference with first non-orthologous sequence - L.major:124 P.knowlesi:124

Q4Q4J0              	100.00%		B3L367              	100.00%
Bootstrap support for Q4Q4J0 as seed ortholog is 100%.
Bootstrap support for B3L367 as seed ortholog is 100%.

Group of orthologs #575. Best score 124 bits
Score difference with first non-orthologous sequence - L.major:2 P.knowlesi:36

Q4QDF5              	100.00%		B3L5N8              	100.00%
Bootstrap support for Q4QDF5 as seed ortholog is 53%.
Alternative seed ortholog is E9ADL6 (2 bits away from this cluster)
Bootstrap support for B3L5N8 as seed ortholog is 82%.

Group of orthologs #576. Best score 124 bits
Score difference with first non-orthologous sequence - L.major:124 P.knowlesi:124

Q4Q824              	100.00%		B3LBX3              	100.00%
Bootstrap support for Q4Q824 as seed ortholog is 100%.
Bootstrap support for B3LBX3 as seed ortholog is 100%.

Group of orthologs #577. Best score 124 bits
Score difference with first non-orthologous sequence - L.major:35 P.knowlesi:32

Q9U1D8              	100.00%		B3L3J7              	100.00%
Bootstrap support for Q9U1D8 as seed ortholog is 85%.
Bootstrap support for B3L3J7 as seed ortholog is 89%.

Group of orthologs #578. Best score 123 bits
Score difference with first non-orthologous sequence - L.major:123 P.knowlesi:123

Q4QEZ5              	100.00%		B3L4T2              	100.00%
Q4QEZ7              	100.00%		
Bootstrap support for Q4QEZ5 as seed ortholog is 100%.
Bootstrap support for Q4QEZ7 as seed ortholog is 100%.
Bootstrap support for B3L4T2 as seed ortholog is 100%.

Group of orthologs #579. Best score 123 bits
Score difference with first non-orthologous sequence - L.major:123 P.knowlesi:123

Q4QJ96              	100.00%		B3L645              	100.00%
Bootstrap support for Q4QJ96 as seed ortholog is 100%.
Bootstrap support for B3L645 as seed ortholog is 100%.

Group of orthologs #580. Best score 121 bits
Score difference with first non-orthologous sequence - L.major:121 P.knowlesi:121

Q4Q1G0              	100.00%		B3L8Y7              	100.00%
Bootstrap support for Q4Q1G0 as seed ortholog is 100%.
Bootstrap support for B3L8Y7 as seed ortholog is 100%.

Group of orthologs #581. Best score 121 bits
Score difference with first non-orthologous sequence - L.major:121 P.knowlesi:121

Q4Q3W5              	100.00%		B3LC37              	100.00%
Bootstrap support for Q4Q3W5 as seed ortholog is 100%.
Bootstrap support for B3LC37 as seed ortholog is 100%.

Group of orthologs #582. Best score 121 bits
Score difference with first non-orthologous sequence - L.major:121 P.knowlesi:121

Q4QGU1              	100.00%		B3L2Z4              	100.00%
Bootstrap support for Q4QGU1 as seed ortholog is 100%.
Bootstrap support for B3L2Z4 as seed ortholog is 100%.

Group of orthologs #583. Best score 120 bits
Score difference with first non-orthologous sequence - L.major:20 P.knowlesi:120

E9AE92              	100.00%		B3L1F7              	100.00%
Bootstrap support for E9AE92 as seed ortholog is 72%.
Alternative seed ortholog is Q4QCH5 (20 bits away from this cluster)
Bootstrap support for B3L1F7 as seed ortholog is 100%.

Group of orthologs #584. Best score 120 bits
Score difference with first non-orthologous sequence - L.major:6 P.knowlesi:120

Q4Q481              	100.00%		B3L2W0              	100.00%
Bootstrap support for Q4Q481 as seed ortholog is 35%.
Alternative seed ortholog is Q4Q1J5 (6 bits away from this cluster)
Bootstrap support for B3L2W0 as seed ortholog is 100%.

Group of orthologs #585. Best score 120 bits
Score difference with first non-orthologous sequence - L.major:120 P.knowlesi:120

Q4Q7N0              	100.00%		B3L7D2              	100.00%
Bootstrap support for Q4Q7N0 as seed ortholog is 100%.
Bootstrap support for B3L7D2 as seed ortholog is 100%.

Group of orthologs #586. Best score 120 bits
Score difference with first non-orthologous sequence - L.major:44 P.knowlesi:73

Q9U1D3              	100.00%		B3KZF9              	100.00%
Bootstrap support for Q9U1D3 as seed ortholog is 66%.
Alternative seed ortholog is Q4Q1U0 (44 bits away from this cluster)
Bootstrap support for B3KZF9 as seed ortholog is 67%.
Alternative seed ortholog is B3L1D7 (73 bits away from this cluster)

Group of orthologs #587. Best score 120 bits
Score difference with first non-orthologous sequence - L.major:120 P.knowlesi:120

Q4QIK7              	100.00%		B3L5A7              	100.00%
Bootstrap support for Q4QIK7 as seed ortholog is 100%.
Bootstrap support for B3L5A7 as seed ortholog is 100%.

Group of orthologs #588. Best score 119 bits
Score difference with first non-orthologous sequence - L.major:119 P.knowlesi:119

E9AE35              	100.00%		B3L7N0              	100.00%
E9AE33              	98.52%		
E9AE34              	97.04%		
Q4QCA4              	88.89%		
Bootstrap support for E9AE35 as seed ortholog is 100%.
Bootstrap support for B3L7N0 as seed ortholog is 100%.

Group of orthologs #589. Best score 119 bits
Score difference with first non-orthologous sequence - L.major:119 P.knowlesi:119

Q4Q3L3              	100.00%		B3L4F6              	100.00%
Bootstrap support for Q4Q3L3 as seed ortholog is 100%.
Bootstrap support for B3L4F6 as seed ortholog is 100%.

Group of orthologs #590. Best score 119 bits
Score difference with first non-orthologous sequence - L.major:119 P.knowlesi:119

Q4QA94              	100.00%		B3KZI2              	100.00%
Bootstrap support for Q4QA94 as seed ortholog is 100%.
Bootstrap support for B3KZI2 as seed ortholog is 100%.

Group of orthologs #591. Best score 119 bits
Score difference with first non-orthologous sequence - L.major:119 P.knowlesi:41

Q4QEN5              	100.00%		B3LAW9              	100.00%
Bootstrap support for Q4QEN5 as seed ortholog is 100%.
Bootstrap support for B3LAW9 as seed ortholog is 97%.

Group of orthologs #592. Best score 118 bits
Score difference with first non-orthologous sequence - L.major:118 P.knowlesi:118

E9AF27              	100.00%		B3L349              	100.00%
Q4QC11              	84.67%		
Bootstrap support for E9AF27 as seed ortholog is 100%.
Bootstrap support for B3L349 as seed ortholog is 100%.

Group of orthologs #593. Best score 118 bits
Score difference with first non-orthologous sequence - L.major:118 P.knowlesi:118

Q4Q0N5              	100.00%		B3LA85              	100.00%
Bootstrap support for Q4Q0N5 as seed ortholog is 100%.
Bootstrap support for B3LA85 as seed ortholog is 100%.

Group of orthologs #594. Best score 118 bits
Score difference with first non-orthologous sequence - L.major:118 P.knowlesi:118

Q4Q9U6              	100.00%		B3L2Z9              	100.00%
Bootstrap support for Q4Q9U6 as seed ortholog is 100%.
Bootstrap support for B3L2Z9 as seed ortholog is 100%.

Group of orthologs #595. Best score 118 bits
Score difference with first non-orthologous sequence - L.major:118 P.knowlesi:118

Q4Q5J4              	100.00%		B3L8I6              	100.00%
Bootstrap support for Q4Q5J4 as seed ortholog is 100%.
Bootstrap support for B3L8I6 as seed ortholog is 100%.

Group of orthologs #596. Best score 118 bits
Score difference with first non-orthologous sequence - L.major:118 P.knowlesi:118

Q4Q8D4              	100.00%		B3L7Y2              	100.00%
Bootstrap support for Q4Q8D4 as seed ortholog is 100%.
Bootstrap support for B3L7Y2 as seed ortholog is 100%.

Group of orthologs #597. Best score 118 bits
Score difference with first non-orthologous sequence - L.major:118 P.knowlesi:118

Q4Q5H7              	100.00%		B3LAU3              	100.00%
Bootstrap support for Q4Q5H7 as seed ortholog is 100%.
Bootstrap support for B3LAU3 as seed ortholog is 100%.

Group of orthologs #598. Best score 117 bits
Score difference with first non-orthologous sequence - L.major:117 P.knowlesi:117

Q4Q4Q4              	100.00%		B3LD50              	100.00%
Q4Q4Q6              	18.44%		
Q4Q4Q5              	18.28%		
Bootstrap support for Q4Q4Q4 as seed ortholog is 100%.
Bootstrap support for B3LD50 as seed ortholog is 100%.

Group of orthologs #599. Best score 117 bits
Score difference with first non-orthologous sequence - L.major:27 P.knowlesi:76

E9AFI5              	100.00%		B3L4W6              	100.00%
                    	       		B3L5X6              	18.18%
Bootstrap support for E9AFI5 as seed ortholog is 78%.
Bootstrap support for B3L4W6 as seed ortholog is 97%.

Group of orthologs #600. Best score 117 bits
Score difference with first non-orthologous sequence - L.major:117 P.knowlesi:117

Q4QBN4              	100.00%		B3LD29              	100.00%
Q4QBN5              	30.12%		
Bootstrap support for Q4QBN4 as seed ortholog is 100%.
Bootstrap support for B3LD29 as seed ortholog is 100%.

Group of orthologs #601. Best score 117 bits
Score difference with first non-orthologous sequence - L.major:117 P.knowlesi:117

Q4Q7A0              	100.00%		B3L2F7              	100.00%
Bootstrap support for Q4Q7A0 as seed ortholog is 100%.
Bootstrap support for B3L2F7 as seed ortholog is 100%.

Group of orthologs #602. Best score 117 bits
Score difference with first non-orthologous sequence - L.major:20 P.knowlesi:117

Q4Q3S5              	100.00%		B3L632              	100.00%
Bootstrap support for Q4Q3S5 as seed ortholog is 32%.
Alternative seed ortholog is E9AEW1 (20 bits away from this cluster)
Bootstrap support for B3L632 as seed ortholog is 100%.

Group of orthologs #603. Best score 117 bits
Score difference with first non-orthologous sequence - L.major:117 P.knowlesi:117

Q4QBT9              	100.00%		B3L341              	100.00%
Bootstrap support for Q4QBT9 as seed ortholog is 100%.
Bootstrap support for B3L341 as seed ortholog is 100%.

Group of orthologs #604. Best score 116 bits
Score difference with first non-orthologous sequence - L.major:41 P.knowlesi:116

Q4Q7K8              	100.00%		B3LBG1              	100.00%
                    	       		B3KZH1              	7.51%
Bootstrap support for Q4Q7K8 as seed ortholog is 84%.
Bootstrap support for B3LBG1 as seed ortholog is 100%.

Group of orthologs #605. Best score 116 bits
Score difference with first non-orthologous sequence - L.major:116 P.knowlesi:116

Q4Q7E9              	100.00%		B3L399              	100.00%
Bootstrap support for Q4Q7E9 as seed ortholog is 100%.
Bootstrap support for B3L399 as seed ortholog is 100%.

Group of orthologs #606. Best score 116 bits
Score difference with first non-orthologous sequence - L.major:116 P.knowlesi:116

Q4Q8G4              	100.00%		B3L3G6              	100.00%
Bootstrap support for Q4Q8G4 as seed ortholog is 100%.
Bootstrap support for B3L3G6 as seed ortholog is 100%.

Group of orthologs #607. Best score 116 bits
Score difference with first non-orthologous sequence - L.major:116 P.knowlesi:116

Q4Q3T5              	100.00%		B3L8G3              	100.00%
Bootstrap support for Q4Q3T5 as seed ortholog is 100%.
Bootstrap support for B3L8G3 as seed ortholog is 100%.

Group of orthologs #608. Best score 116 bits
Score difference with first non-orthologous sequence - L.major:116 P.knowlesi:116

Q4QFP4              	100.00%		B3KZ70              	100.00%
Bootstrap support for Q4QFP4 as seed ortholog is 100%.
Bootstrap support for B3KZ70 as seed ortholog is 100%.

Group of orthologs #609. Best score 116 bits
Score difference with first non-orthologous sequence - L.major:116 P.knowlesi:53

Q4Q2T7              	100.00%		B3LC65              	100.00%
Bootstrap support for Q4Q2T7 as seed ortholog is 100%.
Bootstrap support for B3LC65 as seed ortholog is 88%.

Group of orthologs #610. Best score 116 bits
Score difference with first non-orthologous sequence - L.major:116 P.knowlesi:116

Q4QA77              	100.00%		B3L9G0              	100.00%
Bootstrap support for Q4QA77 as seed ortholog is 100%.
Bootstrap support for B3L9G0 as seed ortholog is 100%.

Group of orthologs #611. Best score 115 bits
Score difference with first non-orthologous sequence - L.major:115 P.knowlesi:115

Q4Q0S4              	100.00%		B3L6H7              	100.00%
Bootstrap support for Q4Q0S4 as seed ortholog is 100%.
Bootstrap support for B3L6H7 as seed ortholog is 100%.

Group of orthologs #612. Best score 115 bits
Score difference with first non-orthologous sequence - L.major:115 P.knowlesi:60

Q4QAN0              	100.00%		B3L166              	100.00%
Bootstrap support for Q4QAN0 as seed ortholog is 100%.
Bootstrap support for B3L166 as seed ortholog is 98%.

Group of orthologs #613. Best score 114 bits
Score difference with first non-orthologous sequence - L.major:114 P.knowlesi:114

Q4Q277              	100.00%		B3L4K2              	100.00%
Q4QFI3              	100.00%		
Q4QJ78              	83.33%		
Bootstrap support for Q4Q277 as seed ortholog is 100%.
Bootstrap support for Q4QFI3 as seed ortholog is 100%.
Bootstrap support for B3L4K2 as seed ortholog is 100%.

Group of orthologs #614. Best score 114 bits
Score difference with first non-orthologous sequence - L.major:114 P.knowlesi:114

Q4Q7P3              	100.00%		B3L314              	100.00%
Bootstrap support for Q4Q7P3 as seed ortholog is 100%.
Bootstrap support for B3L314 as seed ortholog is 100%.

Group of orthologs #615. Best score 114 bits
Score difference with first non-orthologous sequence - L.major:114 P.knowlesi:114

Q4QDY6              	100.00%		B3KZL3              	100.00%
Bootstrap support for Q4QDY6 as seed ortholog is 100%.
Bootstrap support for B3KZL3 as seed ortholog is 100%.

Group of orthologs #616. Best score 114 bits
Score difference with first non-orthologous sequence - L.major:114 P.knowlesi:114

Q4Q453              	100.00%		B3L994              	100.00%
Bootstrap support for Q4Q453 as seed ortholog is 100%.
Bootstrap support for B3L994 as seed ortholog is 100%.

Group of orthologs #617. Best score 114 bits
Score difference with first non-orthologous sequence - L.major:114 P.knowlesi:114

Q4Q687              	100.00%		B3LB24              	100.00%
Bootstrap support for Q4Q687 as seed ortholog is 100%.
Bootstrap support for B3LB24 as seed ortholog is 100%.

Group of orthologs #618. Best score 114 bits
Score difference with first non-orthologous sequence - L.major:114 P.knowlesi:114

Q4QF97              	100.00%		B3L4K0              	100.00%
Bootstrap support for Q4QF97 as seed ortholog is 100%.
Bootstrap support for B3L4K0 as seed ortholog is 100%.

Group of orthologs #619. Best score 113 bits
Score difference with first non-orthologous sequence - L.major:113 P.knowlesi:113

E9ACF6              	100.00%		B3L3C1              	100.00%
Bootstrap support for E9ACF6 as seed ortholog is 100%.
Bootstrap support for B3L3C1 as seed ortholog is 100%.

Group of orthologs #620. Best score 113 bits
Score difference with first non-orthologous sequence - L.major:113 P.knowlesi:113

Q4Q1D2              	100.00%		B3L671              	100.00%
Bootstrap support for Q4Q1D2 as seed ortholog is 100%.
Bootstrap support for B3L671 as seed ortholog is 100%.

Group of orthologs #621. Best score 113 bits
Score difference with first non-orthologous sequence - L.major:113 P.knowlesi:113

Q4QDW4              	100.00%		B3L6X3              	100.00%
Bootstrap support for Q4QDW4 as seed ortholog is 100%.
Bootstrap support for B3L6X3 as seed ortholog is 100%.

Group of orthologs #622. Best score 112 bits
Score difference with first non-orthologous sequence - L.major:112 P.knowlesi:112

Q4Q0V1              	100.00%		B3L098              	100.00%
Bootstrap support for Q4Q0V1 as seed ortholog is 100%.
Bootstrap support for B3L098 as seed ortholog is 100%.

Group of orthologs #623. Best score 112 bits
Score difference with first non-orthologous sequence - L.major:112 P.knowlesi:112

Q4Q3K8              	100.00%		B3L1N7              	100.00%
Bootstrap support for Q4Q3K8 as seed ortholog is 100%.
Bootstrap support for B3L1N7 as seed ortholog is 100%.

Group of orthologs #624. Best score 112 bits
Score difference with first non-orthologous sequence - L.major:112 P.knowlesi:112

E9AC32              	100.00%		B3LBI9              	100.00%
Bootstrap support for E9AC32 as seed ortholog is 100%.
Bootstrap support for B3LBI9 as seed ortholog is 100%.

Group of orthologs #625. Best score 112 bits
Score difference with first non-orthologous sequence - L.major:112 P.knowlesi:112

Q4Q8J7              	100.00%		B3L743              	100.00%
Bootstrap support for Q4Q8J7 as seed ortholog is 100%.
Bootstrap support for B3L743 as seed ortholog is 100%.

Group of orthologs #626. Best score 111 bits
Score difference with first non-orthologous sequence - L.major:111 P.knowlesi:111

Q4Q0N6              	100.00%		B3L7R9              	100.00%
Bootstrap support for Q4Q0N6 as seed ortholog is 100%.
Bootstrap support for B3L7R9 as seed ortholog is 100%.

Group of orthologs #627. Best score 111 bits
Score difference with first non-orthologous sequence - L.major:111 P.knowlesi:111

Q4Q5S9              	100.00%		B3L8R3              	100.00%
Bootstrap support for Q4Q5S9 as seed ortholog is 100%.
Bootstrap support for B3L8R3 as seed ortholog is 100%.

Group of orthologs #628. Best score 111 bits
Score difference with first non-orthologous sequence - L.major:14 P.knowlesi:111

Q4QH93              	100.00%		B3L3B3              	100.00%
Bootstrap support for Q4QH93 as seed ortholog is 59%.
Alternative seed ortholog is Q4Q902 (14 bits away from this cluster)
Bootstrap support for B3L3B3 as seed ortholog is 100%.

Group of orthologs #629. Best score 110 bits
Score difference with first non-orthologous sequence - L.major:110 P.knowlesi:110

Q4Q242              	100.00%		B3L720              	100.00%
Bootstrap support for Q4Q242 as seed ortholog is 100%.
Bootstrap support for B3L720 as seed ortholog is 100%.

Group of orthologs #630. Best score 110 bits
Score difference with first non-orthologous sequence - L.major:110 P.knowlesi:110

Q4Q9V2              	100.00%		B3L4B7              	100.00%
Bootstrap support for Q4Q9V2 as seed ortholog is 100%.
Bootstrap support for B3L4B7 as seed ortholog is 100%.

Group of orthologs #631. Best score 110 bits
Score difference with first non-orthologous sequence - L.major:110 P.knowlesi:110

Q4Q7H9              	100.00%		B3L7P4              	100.00%
Bootstrap support for Q4Q7H9 as seed ortholog is 100%.
Bootstrap support for B3L7P4 as seed ortholog is 100%.

Group of orthologs #632. Best score 110 bits
Score difference with first non-orthologous sequence - L.major:110 P.knowlesi:110

Q4QJ20              	100.00%		B3L901              	100.00%
Bootstrap support for Q4QJ20 as seed ortholog is 100%.
Bootstrap support for B3L901 as seed ortholog is 100%.

Group of orthologs #633. Best score 109 bits
Score difference with first non-orthologous sequence - L.major:109 P.knowlesi:109

Q4Q6X0              	100.00%		B3L0H5              	100.00%
Q4Q8L6              	96.85%		
Bootstrap support for Q4Q6X0 as seed ortholog is 100%.
Bootstrap support for B3L0H5 as seed ortholog is 100%.

Group of orthologs #634. Best score 109 bits
Score difference with first non-orthologous sequence - L.major:109 P.knowlesi:109

E9AEA8              	100.00%		B3LC67              	100.00%
E9AEA9              	100.00%		
Bootstrap support for E9AEA8 as seed ortholog is 100%.
Bootstrap support for E9AEA9 as seed ortholog is 100%.
Bootstrap support for B3LC67 as seed ortholog is 100%.

Group of orthologs #635. Best score 109 bits
Score difference with first non-orthologous sequence - L.major:20 P.knowlesi:109

E9ACP2              	100.00%		B3L3P4              	100.00%
Bootstrap support for E9ACP2 as seed ortholog is 98%.
Bootstrap support for B3L3P4 as seed ortholog is 100%.

Group of orthologs #636. Best score 109 bits
Score difference with first non-orthologous sequence - L.major:109 P.knowlesi:26

E9AF35              	100.00%		B3L8Y8              	100.00%
Bootstrap support for E9AF35 as seed ortholog is 100%.
Bootstrap support for B3L8Y8 as seed ortholog is 82%.

Group of orthologs #637. Best score 108 bits
Score difference with first non-orthologous sequence - L.major:108 P.knowlesi:108

Q4QHI1              	100.00%		B3L104              	100.00%
Q4QHI0              	84.36%		B3L4W8              	14.11%
Q4QHH9              	83.73%		
Q4QHH8              	83.18%		
Q4QHI2              	80.55%		
Q4QHH7              	57.36%		
Q4QDC4              	47.82%		
Q4QJ48              	36.45%		
Q4QIU9              	35.64%		
Q4QH81              	35.09%		
Q7KIP2              	26.18%		
Bootstrap support for Q4QHI1 as seed ortholog is 100%.
Bootstrap support for B3L104 as seed ortholog is 100%.

Group of orthologs #638. Best score 108 bits
Score difference with first non-orthologous sequence - L.major:108 P.knowlesi:108

E9AEH2              	100.00%		B3KZ11              	100.00%
E9AFY3              	81.33%		
Bootstrap support for E9AEH2 as seed ortholog is 100%.
Bootstrap support for B3KZ11 as seed ortholog is 100%.

Group of orthologs #639. Best score 108 bits
Score difference with first non-orthologous sequence - L.major:26 P.knowlesi:108

E9ACW4              	100.00%		B3L2P6              	100.00%
Bootstrap support for E9ACW4 as seed ortholog is 78%.
Bootstrap support for B3L2P6 as seed ortholog is 100%.

Group of orthologs #640. Best score 108 bits
Score difference with first non-orthologous sequence - L.major:108 P.knowlesi:108

Q4QC01              	100.00%		B3L0Q3              	100.00%
Bootstrap support for Q4QC01 as seed ortholog is 100%.
Bootstrap support for B3L0Q3 as seed ortholog is 100%.

Group of orthologs #641. Best score 107 bits
Score difference with first non-orthologous sequence - L.major:107 P.knowlesi:107

Q4QHG4              	100.00%		B3L4U8              	100.00%
                    	       		B3LCF6              	31.36%
Bootstrap support for Q4QHG4 as seed ortholog is 100%.
Bootstrap support for B3L4U8 as seed ortholog is 100%.

Group of orthologs #642. Best score 107 bits
Score difference with first non-orthologous sequence - L.major:107 P.knowlesi:107

Q4Q0Y6              	100.00%		B3KZW6              	100.00%
Bootstrap support for Q4Q0Y6 as seed ortholog is 100%.
Bootstrap support for B3KZW6 as seed ortholog is 100%.

Group of orthologs #643. Best score 107 bits
Score difference with first non-orthologous sequence - L.major:46 P.knowlesi:107

Q4Q127              	100.00%		B3L059              	100.00%
Bootstrap support for Q4Q127 as seed ortholog is 85%.
Bootstrap support for B3L059 as seed ortholog is 100%.

Group of orthologs #644. Best score 107 bits
Score difference with first non-orthologous sequence - L.major:107 P.knowlesi:107

Q4Q0H0              	100.00%		B3L7C4              	100.00%
Bootstrap support for Q4Q0H0 as seed ortholog is 100%.
Bootstrap support for B3L7C4 as seed ortholog is 100%.

Group of orthologs #645. Best score 107 bits
Score difference with first non-orthologous sequence - L.major:107 P.knowlesi:107

Q4QFY3              	100.00%		B3L032              	100.00%
Bootstrap support for Q4QFY3 as seed ortholog is 100%.
Bootstrap support for B3L032 as seed ortholog is 100%.

Group of orthologs #646. Best score 107 bits
Score difference with first non-orthologous sequence - L.major:107 P.knowlesi:107

Q4QE38              	100.00%		B3L7R1              	100.00%
Bootstrap support for Q4QE38 as seed ortholog is 100%.
Bootstrap support for B3L7R1 as seed ortholog is 100%.

Group of orthologs #647. Best score 107 bits
Score difference with first non-orthologous sequence - L.major:19 P.knowlesi:107

Q4Q989              	100.00%		B3LCE1              	100.00%
Bootstrap support for Q4Q989 as seed ortholog is 81%.
Bootstrap support for B3LCE1 as seed ortholog is 100%.

Group of orthologs #648. Best score 107 bits
Score difference with first non-orthologous sequence - L.major:107 P.knowlesi:107

Q4QG35              	100.00%		B3L781              	100.00%
Bootstrap support for Q4QG35 as seed ortholog is 100%.
Bootstrap support for B3L781 as seed ortholog is 100%.

Group of orthologs #649. Best score 106 bits
Score difference with first non-orthologous sequence - L.major:62 P.knowlesi:28

Q4Q1B7              	100.00%		B3LAB5              	100.00%
Bootstrap support for Q4Q1B7 as seed ortholog is 97%.
Bootstrap support for B3LAB5 as seed ortholog is 85%.

Group of orthologs #650. Best score 106 bits
Score difference with first non-orthologous sequence - L.major:106 P.knowlesi:106

Q4Q7S4              	100.00%		B3L5S0              	100.00%
Bootstrap support for Q4Q7S4 as seed ortholog is 100%.
Bootstrap support for B3L5S0 as seed ortholog is 100%.

Group of orthologs #651. Best score 106 bits
Score difference with first non-orthologous sequence - L.major:106 P.knowlesi:106

Q4QE06              	100.00%		B3L596              	100.00%
Bootstrap support for Q4QE06 as seed ortholog is 100%.
Bootstrap support for B3L596 as seed ortholog is 100%.

Group of orthologs #652. Best score 105 bits
Score difference with first non-orthologous sequence - L.major:7 P.knowlesi:24

E9ACV0              	100.00%		B3L9L9              	100.00%
Q4Q225              	20.00%		
Bootstrap support for E9ACV0 as seed ortholog is 57%.
Alternative seed ortholog is Q4Q7S1 (7 bits away from this cluster)
Bootstrap support for B3L9L9 as seed ortholog is 73%.
Alternative seed ortholog is B3LCA4 (24 bits away from this cluster)

Group of orthologs #653. Best score 105 bits
Score difference with first non-orthologous sequence - L.major:105 P.knowlesi:105

E9ACF7              	100.00%		B3LA48              	100.00%
Bootstrap support for E9ACF7 as seed ortholog is 100%.
Bootstrap support for B3LA48 as seed ortholog is 100%.

Group of orthologs #654. Best score 105 bits
Score difference with first non-orthologous sequence - L.major:105 P.knowlesi:105

Q4QAA1              	100.00%		B3LC99              	100.00%
Bootstrap support for Q4QAA1 as seed ortholog is 100%.
Bootstrap support for B3LC99 as seed ortholog is 100%.

Group of orthologs #655. Best score 104 bits
Score difference with first non-orthologous sequence - L.major:104 P.knowlesi:104

Q4Q7F4              	100.00%		B3LAP6              	100.00%
Q4Q7F3              	98.35%		B3LAP5              	25.00%
Q4QGQ3              	17.65%		
Q66VY6              	14.15%		
Q4Q630              	13.60%		
Bootstrap support for Q4Q7F4 as seed ortholog is 100%.
Bootstrap support for B3LAP6 as seed ortholog is 100%.

Group of orthologs #656. Best score 104 bits
Score difference with first non-orthologous sequence - L.major:104 P.knowlesi:104

Q4QA50              	100.00%		B3LBD6              	100.00%
Bootstrap support for Q4QA50 as seed ortholog is 100%.
Bootstrap support for B3LBD6 as seed ortholog is 100%.

Group of orthologs #657. Best score 104 bits
Score difference with first non-orthologous sequence - L.major:25 P.knowlesi:27

Q4QD63              	100.00%		B3LC47              	100.00%
Bootstrap support for Q4QD63 as seed ortholog is 41%.
Alternative seed ortholog is E9AET0 (25 bits away from this cluster)
Bootstrap support for B3LC47 as seed ortholog is 51%.
Alternative seed ortholog is B3LAE3 (27 bits away from this cluster)

Group of orthologs #658. Best score 103 bits
Score difference with first non-orthologous sequence - L.major:103 P.knowlesi:103

Q4QCN8              	100.00%		B3L307              	100.00%
Bootstrap support for Q4QCN8 as seed ortholog is 100%.
Bootstrap support for B3L307 as seed ortholog is 100%.

Group of orthologs #659. Best score 103 bits
Score difference with first non-orthologous sequence - L.major:103 P.knowlesi:103

Q4QDT5              	100.00%		B3LD49              	100.00%
Bootstrap support for Q4QDT5 as seed ortholog is 100%.
Bootstrap support for B3LD49 as seed ortholog is 100%.

Group of orthologs #660. Best score 103 bits
Score difference with first non-orthologous sequence - L.major:103 P.knowlesi:103

Q4QJH5              	100.00%		B3L8R6              	100.00%
Bootstrap support for Q4QJH5 as seed ortholog is 100%.
Bootstrap support for B3L8R6 as seed ortholog is 100%.

Group of orthologs #661. Best score 102 bits
Score difference with first non-orthologous sequence - L.major:1 P.knowlesi:102

Q4Q8P9              	100.00%		B3LC36              	100.00%
                    	       		B3L4K3              	33.81%
Bootstrap support for Q4Q8P9 as seed ortholog is 49%.
Alternative seed ortholog is Q4QHP1 (1 bits away from this cluster)
Bootstrap support for B3LC36 as seed ortholog is 100%.

Group of orthologs #662. Best score 102 bits
Score difference with first non-orthologous sequence - L.major:102 P.knowlesi:102

Q4Q1A9              	100.00%		B3L319              	100.00%
Bootstrap support for Q4Q1A9 as seed ortholog is 100%.
Bootstrap support for B3L319 as seed ortholog is 100%.

Group of orthologs #663. Best score 102 bits
Score difference with first non-orthologous sequence - L.major:102 P.knowlesi:102

Q4Q5G2              	100.00%		B3L474              	100.00%
Bootstrap support for Q4Q5G2 as seed ortholog is 100%.
Bootstrap support for B3L474 as seed ortholog is 100%.

Group of orthologs #664. Best score 102 bits
Score difference with first non-orthologous sequence - L.major:102 P.knowlesi:102

Q4QF22              	100.00%		B3LAX8              	100.00%
Bootstrap support for Q4QF22 as seed ortholog is 100%.
Bootstrap support for B3LAX8 as seed ortholog is 100%.

Group of orthologs #665. Best score 101 bits
Score difference with first non-orthologous sequence - L.major:101 P.knowlesi:101

E9AFR7              	100.00%		B3L372              	100.00%
Q4Q3Z7              	23.59%		
Bootstrap support for E9AFR7 as seed ortholog is 100%.
Bootstrap support for B3L372 as seed ortholog is 100%.

Group of orthologs #666. Best score 101 bits
Score difference with first non-orthologous sequence - L.major:101 P.knowlesi:101

E9ADA6              	100.00%		B3KZW0              	100.00%
Bootstrap support for E9ADA6 as seed ortholog is 100%.
Bootstrap support for B3KZW0 as seed ortholog is 100%.

Group of orthologs #667. Best score 101 bits
Score difference with first non-orthologous sequence - L.major:101 P.knowlesi:101

E9ADU9              	100.00%		B3L1J7              	100.00%
Bootstrap support for E9ADU9 as seed ortholog is 100%.
Bootstrap support for B3L1J7 as seed ortholog is 100%.

Group of orthologs #668. Best score 101 bits
Score difference with first non-orthologous sequence - L.major:16 P.knowlesi:101

Q4QBL2              	100.00%		B3L513              	100.00%
Bootstrap support for Q4QBL2 as seed ortholog is 64%.
Alternative seed ortholog is Q4QGX1 (16 bits away from this cluster)
Bootstrap support for B3L513 as seed ortholog is 100%.

Group of orthologs #669. Best score 100 bits
Score difference with first non-orthologous sequence - L.major:100 P.knowlesi:100

Q4Q289              	100.00%		B3KZA9              	100.00%
Bootstrap support for Q4Q289 as seed ortholog is 100%.
Bootstrap support for B3KZA9 as seed ortholog is 100%.

Group of orthologs #670. Best score 100 bits
Score difference with first non-orthologous sequence - L.major:100 P.knowlesi:100

Q4QA07              	100.00%		B3KZ28              	100.00%
Bootstrap support for Q4QA07 as seed ortholog is 100%.
Bootstrap support for B3KZ28 as seed ortholog is 100%.

Group of orthologs #671. Best score 100 bits
Score difference with first non-orthologous sequence - L.major:100 P.knowlesi:100

Q4Q6Y6              	100.00%		B3L3L2              	100.00%
Bootstrap support for Q4Q6Y6 as seed ortholog is 100%.
Bootstrap support for B3L3L2 as seed ortholog is 100%.

Group of orthologs #672. Best score 100 bits
Score difference with first non-orthologous sequence - L.major:6 P.knowlesi:44

Q4QDK8              	100.00%		B3L973              	100.00%
Bootstrap support for Q4QDK8 as seed ortholog is 56%.
Alternative seed ortholog is Q4Q408 (6 bits away from this cluster)
Bootstrap support for B3L973 as seed ortholog is 95%.

Group of orthologs #673. Best score 99 bits
Score difference with first non-orthologous sequence - L.major:99 P.knowlesi:99

Q4QDP9              	100.00%		B3KZ52              	100.00%
Q4Q141              	97.85%		
Bootstrap support for Q4QDP9 as seed ortholog is 100%.
Bootstrap support for B3KZ52 as seed ortholog is 100%.

Group of orthologs #674. Best score 99 bits
Score difference with first non-orthologous sequence - L.major:41 P.knowlesi:99

Q4QG48              	100.00%		B3L6U4              	100.00%
Q4QFH9              	5.99%		
Bootstrap support for Q4QG48 as seed ortholog is 84%.
Bootstrap support for B3L6U4 as seed ortholog is 100%.

Group of orthologs #675. Best score 99 bits
Score difference with first non-orthologous sequence - L.major:99 P.knowlesi:99

E9AC62              	100.00%		B3L1D6              	100.00%
Bootstrap support for E9AC62 as seed ortholog is 100%.
Bootstrap support for B3L1D6 as seed ortholog is 100%.

Group of orthologs #676. Best score 99 bits
Score difference with first non-orthologous sequence - L.major:30 P.knowlesi:99

Q4Q227              	100.00%		B3L6T2              	100.00%
Bootstrap support for Q4Q227 as seed ortholog is 54%.
Alternative seed ortholog is Q4QDA4 (30 bits away from this cluster)
Bootstrap support for B3L6T2 as seed ortholog is 100%.

Group of orthologs #677. Best score 99 bits
Score difference with first non-orthologous sequence - L.major:99 P.knowlesi:99

Q4Q096              	100.00%		B3LAX6              	100.00%
Bootstrap support for Q4Q096 as seed ortholog is 100%.
Bootstrap support for B3LAX6 as seed ortholog is 100%.

Group of orthologs #678. Best score 99 bits
Score difference with first non-orthologous sequence - L.major:48 P.knowlesi:99

Q4QC15              	100.00%		B3L1J5              	100.00%
Bootstrap support for Q4QC15 as seed ortholog is 91%.
Bootstrap support for B3L1J5 as seed ortholog is 100%.

Group of orthologs #679. Best score 99 bits
Score difference with first non-orthologous sequence - L.major:99 P.knowlesi:99

Q4QAZ0              	100.00%		B3L2L4              	100.00%
Bootstrap support for Q4QAZ0 as seed ortholog is 100%.
Bootstrap support for B3L2L4 as seed ortholog is 100%.

Group of orthologs #680. Best score 99 bits
Score difference with first non-orthologous sequence - L.major:99 P.knowlesi:99

Q4QIY6              	100.00%		B3L001              	100.00%
Bootstrap support for Q4QIY6 as seed ortholog is 100%.
Bootstrap support for B3L001 as seed ortholog is 100%.

Group of orthologs #681. Best score 98 bits
Score difference with first non-orthologous sequence - L.major:98 P.knowlesi:98

Q4Q108              	100.00%		B3L1F3              	100.00%
Bootstrap support for Q4Q108 as seed ortholog is 100%.
Bootstrap support for B3L1F3 as seed ortholog is 100%.

Group of orthologs #682. Best score 98 bits
Score difference with first non-orthologous sequence - L.major:98 P.knowlesi:98

E9AD49              	100.00%		B3L5C8              	100.00%
Bootstrap support for E9AD49 as seed ortholog is 100%.
Bootstrap support for B3L5C8 as seed ortholog is 100%.

Group of orthologs #683. Best score 98 bits
Score difference with first non-orthologous sequence - L.major:98 P.knowlesi:98

Q4Q425              	100.00%		B3L4S9              	100.00%
Bootstrap support for Q4Q425 as seed ortholog is 100%.
Bootstrap support for B3L4S9 as seed ortholog is 100%.

Group of orthologs #684. Best score 98 bits
Score difference with first non-orthologous sequence - L.major:11 P.knowlesi:98

Q4QBJ8              	100.00%		B3L964              	100.00%
Bootstrap support for Q4QBJ8 as seed ortholog is 62%.
Alternative seed ortholog is Q4Q6W1 (11 bits away from this cluster)
Bootstrap support for B3L964 as seed ortholog is 100%.

Group of orthologs #685. Best score 98 bits
Score difference with first non-orthologous sequence - L.major:98 P.knowlesi:98

Q4Q7R7              	100.00%		B3LD51              	100.00%
Bootstrap support for Q4Q7R7 as seed ortholog is 100%.
Bootstrap support for B3LD51 as seed ortholog is 100%.

Group of orthologs #686. Best score 98 bits
Score difference with first non-orthologous sequence - L.major:52 P.knowlesi:98

Q4QJ92              	100.00%		B3L9L6              	100.00%
Bootstrap support for Q4QJ92 as seed ortholog is 94%.
Bootstrap support for B3L9L6 as seed ortholog is 100%.

Group of orthologs #687. Best score 97 bits
Score difference with first non-orthologous sequence - L.major:97 P.knowlesi:97

E9ABZ2              	100.00%		B3KZ82              	100.00%
Q4QFZ3              	25.90%		
Q4QAR9              	20.59%		
Bootstrap support for E9ABZ2 as seed ortholog is 100%.
Bootstrap support for B3KZ82 as seed ortholog is 100%.

Group of orthologs #688. Best score 97 bits
Score difference with first non-orthologous sequence - L.major:51 P.knowlesi:97

Q4QD46              	100.00%		B3L1V7              	100.00%
Bootstrap support for Q4QD46 as seed ortholog is 99%.
Bootstrap support for B3L1V7 as seed ortholog is 100%.

Group of orthologs #689. Best score 97 bits
Score difference with first non-orthologous sequence - L.major:97 P.knowlesi:97

Q4QGB1              	100.00%		B3L4J8              	100.00%
Bootstrap support for Q4QGB1 as seed ortholog is 100%.
Bootstrap support for B3L4J8 as seed ortholog is 100%.

Group of orthologs #690. Best score 97 bits
Score difference with first non-orthologous sequence - L.major:97 P.knowlesi:97

Q4QIC2              	100.00%		B3L6L2              	100.00%
Bootstrap support for Q4QIC2 as seed ortholog is 100%.
Bootstrap support for B3L6L2 as seed ortholog is 100%.

Group of orthologs #691. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:15 P.knowlesi:96

Q4QDQ9              	100.00%		B3L152              	100.00%
Q4QDR4              	100.00%		
Q4QDR2              	99.62%		
Q4QDR6              	94.88%		
Bootstrap support for Q4QDQ9 as seed ortholog is 66%.
Alternative seed ortholog is Q4Q7J8 (15 bits away from this cluster)
Bootstrap support for Q4QDR4 as seed ortholog is 65%.
Alternative seed ortholog is Q4Q7J8 (15 bits away from this cluster)
Bootstrap support for B3L152 as seed ortholog is 100%.

Group of orthologs #692. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:96 P.knowlesi:96

Q4Q349              	100.00%		B3LD21              	100.00%
Q4Q350              	100.00%		
Bootstrap support for Q4Q349 as seed ortholog is 100%.
Bootstrap support for Q4Q350 as seed ortholog is 100%.
Bootstrap support for B3LD21 as seed ortholog is 100%.

Group of orthologs #693. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:96 P.knowlesi:96

E9AF78              	100.00%		B3L1V8              	100.00%
Bootstrap support for E9AF78 as seed ortholog is 100%.
Bootstrap support for B3L1V8 as seed ortholog is 100%.

Group of orthologs #694. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:96 P.knowlesi:96

Q4Q246              	100.00%		B3L948              	100.00%
Bootstrap support for Q4Q246 as seed ortholog is 100%.
Bootstrap support for B3L948 as seed ortholog is 100%.

Group of orthologs #695. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:96 P.knowlesi:96

Q4Q6L2              	100.00%		B3L629              	100.00%
Bootstrap support for Q4Q6L2 as seed ortholog is 100%.
Bootstrap support for B3L629 as seed ortholog is 100%.

Group of orthologs #696. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:34 P.knowlesi:96

Q4QEM7              	100.00%		B3L176              	100.00%
Bootstrap support for Q4QEM7 as seed ortholog is 88%.
Bootstrap support for B3L176 as seed ortholog is 100%.

Group of orthologs #697. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:96 P.knowlesi:96

Q4Q567              	100.00%		B3LBJ2              	100.00%
Bootstrap support for Q4Q567 as seed ortholog is 100%.
Bootstrap support for B3LBJ2 as seed ortholog is 100%.

Group of orthologs #698. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:96 P.knowlesi:96

Q4QBI9              	100.00%		B3L6X6              	100.00%
Bootstrap support for Q4QBI9 as seed ortholog is 100%.
Bootstrap support for B3L6X6 as seed ortholog is 100%.

Group of orthologs #699. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:96 P.knowlesi:96

Q4QF06              	100.00%		B3L5N9              	100.00%
Bootstrap support for Q4QF06 as seed ortholog is 100%.
Bootstrap support for B3L5N9 as seed ortholog is 100%.

Group of orthologs #700. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:96 P.knowlesi:96

Q4QC61              	100.00%		B3LBM7              	100.00%
Bootstrap support for Q4QC61 as seed ortholog is 100%.
Bootstrap support for B3LBM7 as seed ortholog is 100%.

Group of orthologs #701. Best score 95 bits
Score difference with first non-orthologous sequence - L.major:95 P.knowlesi:95

Q4Q256              	100.00%		B3L5M0              	100.00%
Bootstrap support for Q4Q256 as seed ortholog is 100%.
Bootstrap support for B3L5M0 as seed ortholog is 100%.

Group of orthologs #702. Best score 95 bits
Score difference with first non-orthologous sequence - L.major:95 P.knowlesi:95

Q4QHU6              	100.00%		B3L2Z2              	100.00%
Bootstrap support for Q4QHU6 as seed ortholog is 100%.
Bootstrap support for B3L2Z2 as seed ortholog is 100%.

Group of orthologs #703. Best score 95 bits
Score difference with first non-orthologous sequence - L.major:95 P.knowlesi:95

Q4QHL3              	100.00%		B3L5N0              	100.00%
Bootstrap support for Q4QHL3 as seed ortholog is 100%.
Bootstrap support for B3L5N0 as seed ortholog is 100%.

Group of orthologs #704. Best score 95 bits
Score difference with first non-orthologous sequence - L.major:34 P.knowlesi:95

Q4QJ85              	100.00%		B3L7Z7              	100.00%
Bootstrap support for Q4QJ85 as seed ortholog is 87%.
Bootstrap support for B3L7Z7 as seed ortholog is 100%.

Group of orthologs #705. Best score 94 bits
Score difference with first non-orthologous sequence - L.major:94 P.knowlesi:94

Q4Q3J3              	100.00%		B3L7M3              	100.00%
Q4Q3J4              	41.86%		B3L8Y6              	30.95%
Q4Q3J2              	40.97%		B3L8Y3              	27.66%
Q4QDF0              	17.89%		
Q4Q3J5              	11.99%		
Bootstrap support for Q4Q3J3 as seed ortholog is 100%.
Bootstrap support for B3L7M3 as seed ortholog is 100%.

Group of orthologs #706. Best score 94 bits
Score difference with first non-orthologous sequence - L.major:94 P.knowlesi:94

Q4Q3H7              	100.00%		B3KZA4              	100.00%
Bootstrap support for Q4Q3H7 as seed ortholog is 100%.
Bootstrap support for B3KZA4 as seed ortholog is 100%.

Group of orthologs #707. Best score 94 bits
Score difference with first non-orthologous sequence - L.major:94 P.knowlesi:94

Q4Q9X8              	100.00%		B3L2R5              	100.00%
Bootstrap support for Q4Q9X8 as seed ortholog is 100%.
Bootstrap support for B3L2R5 as seed ortholog is 100%.

Group of orthologs #708. Best score 94 bits
Score difference with first non-orthologous sequence - L.major:94 P.knowlesi:94

Q4QG97              	100.00%		B3L4C6              	100.00%
Bootstrap support for Q4QG97 as seed ortholog is 100%.
Bootstrap support for B3L4C6 as seed ortholog is 100%.

Group of orthologs #709. Best score 94 bits
Score difference with first non-orthologous sequence - L.major:94 P.knowlesi:94

Q4QF39              	100.00%		B3LAF4              	100.00%
Bootstrap support for Q4QF39 as seed ortholog is 100%.
Bootstrap support for B3LAF4 as seed ortholog is 100%.

Group of orthologs #710. Best score 93 bits
Score difference with first non-orthologous sequence - L.major:8 P.knowlesi:93

E9AEZ6              	100.00%		B3L1V9              	100.00%
Bootstrap support for E9AEZ6 as seed ortholog is 69%.
Alternative seed ortholog is Q4QDU1 (8 bits away from this cluster)
Bootstrap support for B3L1V9 as seed ortholog is 100%.

Group of orthologs #711. Best score 93 bits
Score difference with first non-orthologous sequence - L.major:38 P.knowlesi:93

Q4Q3B6              	100.00%		B3L4G7              	100.00%
Bootstrap support for Q4Q3B6 as seed ortholog is 94%.
Bootstrap support for B3L4G7 as seed ortholog is 100%.

Group of orthologs #712. Best score 93 bits
Score difference with first non-orthologous sequence - L.major:93 P.knowlesi:93

Q4Q0U9              	100.00%		B3L6U3              	100.00%
Bootstrap support for Q4Q0U9 as seed ortholog is 100%.
Bootstrap support for B3L6U3 as seed ortholog is 100%.

Group of orthologs #713. Best score 93 bits
Score difference with first non-orthologous sequence - L.major:93 P.knowlesi:93

E9AFZ4              	100.00%		B3LBC8              	100.00%
Bootstrap support for E9AFZ4 as seed ortholog is 100%.
Bootstrap support for B3LBC8 as seed ortholog is 100%.

Group of orthologs #714. Best score 92 bits
Score difference with first non-orthologous sequence - L.major:92 P.knowlesi:92

Q4Q698              	100.00%		B3L9Q8              	100.00%
Q4Q699              	78.77%		
Bootstrap support for Q4Q698 as seed ortholog is 100%.
Bootstrap support for B3L9Q8 as seed ortholog is 100%.

Group of orthologs #715. Best score 92 bits
Score difference with first non-orthologous sequence - L.major:21 P.knowlesi:92

Q4Q9B3              	100.00%		B3L9U0              	100.00%
                    	       		B3LBA8              	100.00%
Bootstrap support for Q4Q9B3 as seed ortholog is 83%.
Bootstrap support for B3L9U0 as seed ortholog is 100%.
Bootstrap support for B3LBA8 as seed ortholog is 100%.

Group of orthologs #716. Best score 92 bits
Score difference with first non-orthologous sequence - L.major:92 P.knowlesi:92

Q4Q7A6              	100.00%		B3KZG4              	100.00%
Bootstrap support for Q4Q7A6 as seed ortholog is 100%.
Bootstrap support for B3KZG4 as seed ortholog is 100%.

Group of orthologs #717. Best score 92 bits
Score difference with first non-orthologous sequence - L.major:92 P.knowlesi:92

Q4QB08              	100.00%		B3L0J3              	100.00%
Bootstrap support for Q4QB08 as seed ortholog is 100%.
Bootstrap support for B3L0J3 as seed ortholog is 100%.

Group of orthologs #718. Best score 92 bits
Score difference with first non-orthologous sequence - L.major:92 P.knowlesi:92

Q4QCN3              	100.00%		B3L6H9              	100.00%
Bootstrap support for Q4QCN3 as seed ortholog is 100%.
Bootstrap support for B3L6H9 as seed ortholog is 100%.

Group of orthologs #719. Best score 91 bits
Score difference with first non-orthologous sequence - L.major:91 P.knowlesi:91

Q4QD06              	100.00%		B3L9L8              	100.00%
Q4QE46              	8.74%		
E9ACI6              	7.64%		
Bootstrap support for Q4QD06 as seed ortholog is 100%.
Bootstrap support for B3L9L8 as seed ortholog is 100%.

Group of orthologs #720. Best score 91 bits
Score difference with first non-orthologous sequence - L.major:91 P.knowlesi:91

E9AEN3              	100.00%		B3L9Z9              	100.00%
Bootstrap support for E9AEN3 as seed ortholog is 100%.
Bootstrap support for B3L9Z9 as seed ortholog is 100%.

Group of orthologs #721. Best score 91 bits
Score difference with first non-orthologous sequence - L.major:91 P.knowlesi:91

Q4Q9T1              	100.00%		B3L366              	100.00%
Bootstrap support for Q4Q9T1 as seed ortholog is 100%.
Bootstrap support for B3L366 as seed ortholog is 100%.

Group of orthologs #722. Best score 91 bits
Score difference with first non-orthologous sequence - L.major:24 P.knowlesi:91

E9AFI4              	100.00%		B3LDC2              	100.00%
Bootstrap support for E9AFI4 as seed ortholog is 68%.
Alternative seed ortholog is Q4QCL7 (24 bits away from this cluster)
Bootstrap support for B3LDC2 as seed ortholog is 100%.

Group of orthologs #723. Best score 91 bits
Score difference with first non-orthologous sequence - L.major:91 P.knowlesi:91

Q4Q504              	100.00%		B3L9F7              	100.00%
Bootstrap support for Q4Q504 as seed ortholog is 100%.
Bootstrap support for B3L9F7 as seed ortholog is 100%.

Group of orthologs #724. Best score 90 bits
Score difference with first non-orthologous sequence - L.major:90 P.knowlesi:45

Q4Q2U6              	100.00%		B3LCA6              	100.00%
Q4Q2U5              	26.58%		B3LBQ4              	10.34%
Bootstrap support for Q4Q2U6 as seed ortholog is 100%.
Bootstrap support for B3LCA6 as seed ortholog is 85%.

Group of orthologs #725. Best score 90 bits
Score difference with first non-orthologous sequence - L.major:48 P.knowlesi:90

Q4Q9H6              	100.00%		B3L6A8              	100.00%
Q4Q9N6              	20.40%		
Bootstrap support for Q4Q9H6 as seed ortholog is 95%.
Bootstrap support for B3L6A8 as seed ortholog is 100%.

Group of orthologs #726. Best score 90 bits
Score difference with first non-orthologous sequence - L.major:90 P.knowlesi:90

E9AD67              	100.00%		B3L6M1              	100.00%
Bootstrap support for E9AD67 as seed ortholog is 100%.
Bootstrap support for B3L6M1 as seed ortholog is 100%.

Group of orthologs #727. Best score 90 bits
Score difference with first non-orthologous sequence - L.major:90 P.knowlesi:90

Q4Q164              	100.00%		B3L841              	100.00%
Bootstrap support for Q4Q164 as seed ortholog is 100%.
Bootstrap support for B3L841 as seed ortholog is 100%.

Group of orthologs #728. Best score 90 bits
Score difference with first non-orthologous sequence - L.major:90 P.knowlesi:90

Q4Q140              	100.00%		B3LBP5              	100.00%
Bootstrap support for Q4Q140 as seed ortholog is 100%.
Bootstrap support for B3LBP5 as seed ortholog is 100%.

Group of orthologs #729. Best score 89 bits
Score difference with first non-orthologous sequence - L.major:89 P.knowlesi:89

Q4Q9P9              	100.00%		B3L050              	100.00%
Bootstrap support for Q4Q9P9 as seed ortholog is 100%.
Bootstrap support for B3L050 as seed ortholog is 100%.

Group of orthologs #730. Best score 89 bits
Score difference with first non-orthologous sequence - L.major:89 P.knowlesi:89

Q4Q253              	100.00%		B3L7T1              	100.00%
Bootstrap support for Q4Q253 as seed ortholog is 100%.
Bootstrap support for B3L7T1 as seed ortholog is 100%.

Group of orthologs #731. Best score 88 bits
Score difference with first non-orthologous sequence - L.major:88 P.knowlesi:88

E9AEE8              	100.00%		B3L1P2              	100.00%
Q4Q2R6              	100.00%		
Bootstrap support for E9AEE8 as seed ortholog is 100%.
Bootstrap support for Q4Q2R6 as seed ortholog is 100%.
Bootstrap support for B3L1P2 as seed ortholog is 100%.

Group of orthologs #732. Best score 88 bits
Score difference with first non-orthologous sequence - L.major:88 P.knowlesi:88

Q4Q0I3              	100.00%		B3L3D9              	100.00%
Bootstrap support for Q4Q0I3 as seed ortholog is 100%.
Bootstrap support for B3L3D9 as seed ortholog is 100%.

Group of orthologs #733. Best score 88 bits
Score difference with first non-orthologous sequence - L.major:88 P.knowlesi:88

E9AFF2              	100.00%		B3L6N2              	100.00%
Bootstrap support for E9AFF2 as seed ortholog is 100%.
Bootstrap support for B3L6N2 as seed ortholog is 100%.

Group of orthologs #734. Best score 88 bits
Score difference with first non-orthologous sequence - L.major:1 P.knowlesi:88

Q25337              	100.00%		B3L8U3              	100.00%
Bootstrap support for Q25337 as seed ortholog is 48%.
Alternative seed ortholog is Q4Q2Y6 (1 bits away from this cluster)
Bootstrap support for B3L8U3 as seed ortholog is 100%.

Group of orthologs #735. Best score 88 bits
Score difference with first non-orthologous sequence - L.major:88 P.knowlesi:88

Q4Q7N4              	100.00%		B3L551              	100.00%
Bootstrap support for Q4Q7N4 as seed ortholog is 100%.
Bootstrap support for B3L551 as seed ortholog is 100%.

Group of orthologs #736. Best score 88 bits
Score difference with first non-orthologous sequence - L.major:88 P.knowlesi:88

Q4QAI0              	100.00%		B3L6G0              	100.00%
Bootstrap support for Q4QAI0 as seed ortholog is 100%.
Bootstrap support for B3L6G0 as seed ortholog is 100%.

Group of orthologs #737. Best score 88 bits
Score difference with first non-orthologous sequence - L.major:88 P.knowlesi:88

Q4QGP0              	100.00%		B3L5K5              	100.00%
Bootstrap support for Q4QGP0 as seed ortholog is 100%.
Bootstrap support for B3L5K5 as seed ortholog is 100%.

Group of orthologs #738. Best score 87 bits
Score difference with first non-orthologous sequence - L.major:29 P.knowlesi:87

Q4Q8C8              	100.00%		B3L297              	100.00%
Q4Q8D0              	6.13%		B3LCQ3              	6.14%
Q4Q8D1              	5.99%		
Bootstrap support for Q4Q8C8 as seed ortholog is 81%.
Bootstrap support for B3L297 as seed ortholog is 100%.

Group of orthologs #739. Best score 87 bits
Score difference with first non-orthologous sequence - L.major:87 P.knowlesi:87

Q4Q216              	100.00%		B3LAY3              	100.00%
Q4QFK7              	100.00%		
Bootstrap support for Q4Q216 as seed ortholog is 100%.
Bootstrap support for Q4QFK7 as seed ortholog is 100%.
Bootstrap support for B3LAY3 as seed ortholog is 100%.

Group of orthologs #740. Best score 87 bits
Score difference with first non-orthologous sequence - L.major:87 P.knowlesi:87

Q9U111              	100.00%		B3L7J1              	100.00%
O97212              	98.74%		
Bootstrap support for Q9U111 as seed ortholog is 100%.
Bootstrap support for B3L7J1 as seed ortholog is 100%.

Group of orthologs #741. Best score 87 bits
Score difference with first non-orthologous sequence - L.major:87 P.knowlesi:87

Q4Q1Q3              	100.00%		B3L3C2              	100.00%
Bootstrap support for Q4Q1Q3 as seed ortholog is 100%.
Bootstrap support for B3L3C2 as seed ortholog is 100%.

Group of orthologs #742. Best score 87 bits
Score difference with first non-orthologous sequence - L.major:87 P.knowlesi:87

Q4Q222              	100.00%		B3L4T5              	100.00%
Bootstrap support for Q4Q222 as seed ortholog is 100%.
Bootstrap support for B3L4T5 as seed ortholog is 100%.

Group of orthologs #743. Best score 87 bits
Score difference with first non-orthologous sequence - L.major:87 P.knowlesi:87

Q4Q6Y3              	100.00%		B3L4Z4              	100.00%
Bootstrap support for Q4Q6Y3 as seed ortholog is 100%.
Bootstrap support for B3L4Z4 as seed ortholog is 100%.

Group of orthologs #744. Best score 87 bits
Score difference with first non-orthologous sequence - L.major:87 P.knowlesi:87

Q4Q6S5              	100.00%		B3L683              	100.00%
Bootstrap support for Q4Q6S5 as seed ortholog is 100%.
Bootstrap support for B3L683 as seed ortholog is 100%.

Group of orthologs #745. Best score 87 bits
Score difference with first non-orthologous sequence - L.major:87 P.knowlesi:87

Q4Q5M0              	100.00%		B3L8P9              	100.00%
Bootstrap support for Q4Q5M0 as seed ortholog is 100%.
Bootstrap support for B3L8P9 as seed ortholog is 100%.

Group of orthologs #746. Best score 87 bits
Score difference with first non-orthologous sequence - L.major:87 P.knowlesi:87

Q4QAG3              	100.00%		B3LBW4              	100.00%
Bootstrap support for Q4QAG3 as seed ortholog is 100%.
Bootstrap support for B3LBW4 as seed ortholog is 100%.

Group of orthologs #747. Best score 86 bits
Score difference with first non-orthologous sequence - L.major:86 P.knowlesi:86

E9ADC5              	100.00%		B3L1E4              	100.00%
Q4Q174              	10.81%		
Bootstrap support for E9ADC5 as seed ortholog is 100%.
Bootstrap support for B3L1E4 as seed ortholog is 100%.

Group of orthologs #748. Best score 86 bits
Score difference with first non-orthologous sequence - L.major:8 P.knowlesi:86

E9ACT0              	100.00%		B3KZ26              	100.00%
Bootstrap support for E9ACT0 as seed ortholog is 72%.
Alternative seed ortholog is Q4QG42 (8 bits away from this cluster)
Bootstrap support for B3KZ26 as seed ortholog is 100%.

Group of orthologs #749. Best score 86 bits
Score difference with first non-orthologous sequence - L.major:86 P.knowlesi:86

E9ADS7              	100.00%		B3L233              	100.00%
Bootstrap support for E9ADS7 as seed ortholog is 100%.
Bootstrap support for B3L233 as seed ortholog is 100%.

Group of orthologs #750. Best score 86 bits
Score difference with first non-orthologous sequence - L.major:86 P.knowlesi:86

Q4Q1X7              	100.00%		B3L087              	100.00%
Bootstrap support for Q4Q1X7 as seed ortholog is 100%.
Bootstrap support for B3L087 as seed ortholog is 100%.

Group of orthologs #751. Best score 86 bits
Score difference with first non-orthologous sequence - L.major:86 P.knowlesi:86

Q4Q0W4              	100.00%		B3L2Q4              	100.00%
Bootstrap support for Q4Q0W4 as seed ortholog is 100%.
Bootstrap support for B3L2Q4 as seed ortholog is 100%.

Group of orthologs #752. Best score 86 bits
Score difference with first non-orthologous sequence - L.major:86 P.knowlesi:86

Q4Q0A0              	100.00%		B3LBG7              	100.00%
Bootstrap support for Q4Q0A0 as seed ortholog is 100%.
Bootstrap support for B3LBG7 as seed ortholog is 100%.

Group of orthologs #753. Best score 86 bits
Score difference with first non-orthologous sequence - L.major:86 P.knowlesi:86

Q4QI00              	100.00%		B3L635              	100.00%
Bootstrap support for Q4QI00 as seed ortholog is 100%.
Bootstrap support for B3L635 as seed ortholog is 100%.

Group of orthologs #754. Best score 86 bits
Score difference with first non-orthologous sequence - L.major:86 P.knowlesi:86

Q4QI51              	100.00%		B3L7V3              	100.00%
Bootstrap support for Q4QI51 as seed ortholog is 100%.
Bootstrap support for B3L7V3 as seed ortholog is 100%.

Group of orthologs #755. Best score 85 bits
Score difference with first non-orthologous sequence - L.major:85 P.knowlesi:85

E9ADB2              	100.00%		B3L2F6              	100.00%
Bootstrap support for E9ADB2 as seed ortholog is 100%.
Bootstrap support for B3L2F6 as seed ortholog is 100%.

Group of orthologs #756. Best score 85 bits
Score difference with first non-orthologous sequence - L.major:85 P.knowlesi:85

Q4Q6U2              	100.00%		B3L2S2              	100.00%
Bootstrap support for Q4Q6U2 as seed ortholog is 100%.
Bootstrap support for B3L2S2 as seed ortholog is 100%.

Group of orthologs #757. Best score 85 bits
Score difference with first non-orthologous sequence - L.major:85 P.knowlesi:85

Q4Q884              	100.00%		B3L358              	100.00%
Bootstrap support for Q4Q884 as seed ortholog is 100%.
Bootstrap support for B3L358 as seed ortholog is 100%.

Group of orthologs #758. Best score 84 bits
Score difference with first non-orthologous sequence - L.major:84 P.knowlesi:84

E9ADG9              	100.00%		B3L9H6              	100.00%
Bootstrap support for E9ADG9 as seed ortholog is 100%.
Bootstrap support for B3L9H6 as seed ortholog is 100%.

Group of orthologs #759. Best score 84 bits
Score difference with first non-orthologous sequence - L.major:84 P.knowlesi:84

Q4QDZ6              	100.00%		B3L379              	100.00%
Bootstrap support for Q4QDZ6 as seed ortholog is 100%.
Bootstrap support for B3L379 as seed ortholog is 100%.

Group of orthologs #760. Best score 84 bits
Score difference with first non-orthologous sequence - L.major:84 P.knowlesi:84

Q4QE62              	100.00%		B3L691              	100.00%
Bootstrap support for Q4QE62 as seed ortholog is 100%.
Bootstrap support for B3L691 as seed ortholog is 100%.

Group of orthologs #761. Best score 84 bits
Score difference with first non-orthologous sequence - L.major:84 P.knowlesi:84

Q4QI41              	100.00%		B3L3R0              	100.00%
Bootstrap support for Q4QI41 as seed ortholog is 100%.
Bootstrap support for B3L3R0 as seed ortholog is 100%.

Group of orthologs #762. Best score 84 bits
Score difference with first non-orthologous sequence - L.major:84 P.knowlesi:84

Q4QFV8              	100.00%		B3L828              	100.00%
Bootstrap support for Q4QFV8 as seed ortholog is 100%.
Bootstrap support for B3L828 as seed ortholog is 100%.

Group of orthologs #763. Best score 84 bits
Score difference with first non-orthologous sequence - L.major:84 P.knowlesi:84

Q4QC06              	100.00%		B3LBS5              	100.00%
Bootstrap support for Q4QC06 as seed ortholog is 100%.
Bootstrap support for B3LBS5 as seed ortholog is 100%.

Group of orthologs #764. Best score 84 bits
Score difference with first non-orthologous sequence - L.major:84 P.knowlesi:84

Q9BJ49              	100.00%		B3L9A5              	100.00%
Bootstrap support for Q9BJ49 as seed ortholog is 100%.
Bootstrap support for B3L9A5 as seed ortholog is 100%.

Group of orthologs #765. Best score 83 bits
Score difference with first non-orthologous sequence - L.major:83 P.knowlesi:83

Q4Q8R5              	100.00%		B3L1L6              	100.00%
Bootstrap support for Q4Q8R5 as seed ortholog is 100%.
Bootstrap support for B3L1L6 as seed ortholog is 100%.

Group of orthologs #766. Best score 83 bits
Score difference with first non-orthologous sequence - L.major:83 P.knowlesi:83

Q4Q8U3              	100.00%		B3LBX2              	100.00%
Bootstrap support for Q4Q8U3 as seed ortholog is 100%.
Bootstrap support for B3LBX2 as seed ortholog is 100%.

Group of orthologs #767. Best score 82 bits
Score difference with first non-orthologous sequence - L.major:6 P.knowlesi:82

Q4Q9K8              	100.00%		B3LC27              	100.00%
Bootstrap support for Q4Q9K8 as seed ortholog is 56%.
Alternative seed ortholog is E9AF82 (6 bits away from this cluster)
Bootstrap support for B3LC27 as seed ortholog is 100%.

Group of orthologs #768. Best score 81 bits
Score difference with first non-orthologous sequence - L.major:81 P.knowlesi:81

E9AFG4              	100.00%		B3L085              	100.00%
Q4QHS2              	100.00%		B3L5E0              	100.00%
Q4Q5N2              	12.78%		
Bootstrap support for E9AFG4 as seed ortholog is 100%.
Bootstrap support for Q4QHS2 as seed ortholog is 100%.
Bootstrap support for B3L085 as seed ortholog is 100%.
Bootstrap support for B3L5E0 as seed ortholog is 100%.

Group of orthologs #769. Best score 81 bits
Score difference with first non-orthologous sequence - L.major:81 P.knowlesi:81

Q4Q1C7              	100.00%		B3L1U4              	100.00%
Bootstrap support for Q4Q1C7 as seed ortholog is 100%.
Bootstrap support for B3L1U4 as seed ortholog is 100%.

Group of orthologs #770. Best score 81 bits
Score difference with first non-orthologous sequence - L.major:81 P.knowlesi:81

Q4Q1A2              	100.00%		B3LAV5              	100.00%
Bootstrap support for Q4Q1A2 as seed ortholog is 100%.
Bootstrap support for B3LAV5 as seed ortholog is 100%.

Group of orthologs #771. Best score 81 bits
Score difference with first non-orthologous sequence - L.major:81 P.knowlesi:81

Q4Q130              	100.00%		B3LD76              	100.00%
Bootstrap support for Q4Q130 as seed ortholog is 100%.
Bootstrap support for B3LD76 as seed ortholog is 100%.

Group of orthologs #772. Best score 81 bits
Score difference with first non-orthologous sequence - L.major:81 P.knowlesi:81

Q4QBP6              	100.00%		B3L4T4              	100.00%
Bootstrap support for Q4QBP6 as seed ortholog is 100%.
Bootstrap support for B3L4T4 as seed ortholog is 100%.

Group of orthologs #773. Best score 80 bits
Score difference with first non-orthologous sequence - L.major:80 P.knowlesi:80

E9AEZ2              	100.00%		B3L947              	100.00%
Bootstrap support for E9AEZ2 as seed ortholog is 100%.
Bootstrap support for B3L947 as seed ortholog is 100%.

Group of orthologs #774. Best score 80 bits
Score difference with first non-orthologous sequence - L.major:80 P.knowlesi:80

Q4QDM8              	100.00%		B3L8J3              	100.00%
Bootstrap support for Q4QDM8 as seed ortholog is 100%.
Bootstrap support for B3L8J3 as seed ortholog is 100%.

Group of orthologs #775. Best score 79 bits
Score difference with first non-orthologous sequence - L.major:79 P.knowlesi:79

E9AC00              	100.00%		B3L4F5              	100.00%
Q4QJH1              	100.00%		B3L7Y8              	8.58%
Bootstrap support for E9AC00 as seed ortholog is 100%.
Bootstrap support for Q4QJH1 as seed ortholog is 100%.
Bootstrap support for B3L4F5 as seed ortholog is 100%.

Group of orthologs #776. Best score 79 bits
Score difference with first non-orthologous sequence - L.major:79 P.knowlesi:79

Q4QF84              	100.00%		B3L8L0              	100.00%
Q4Q4D3              	98.67%		
Bootstrap support for Q4QF84 as seed ortholog is 100%.
Bootstrap support for B3L8L0 as seed ortholog is 100%.

Group of orthologs #777. Best score 79 bits
Score difference with first non-orthologous sequence - L.major:79 P.knowlesi:79

E9AFQ2              	100.00%		B3L0D2              	100.00%
Bootstrap support for E9AFQ2 as seed ortholog is 100%.
Bootstrap support for B3L0D2 as seed ortholog is 100%.

Group of orthologs #778. Best score 79 bits
Score difference with first non-orthologous sequence - L.major:79 P.knowlesi:79

Q4QAL1              	100.00%		B3LD77              	100.00%
Bootstrap support for Q4QAL1 as seed ortholog is 100%.
Bootstrap support for B3LD77 as seed ortholog is 100%.

Group of orthologs #779. Best score 78 bits
Score difference with first non-orthologous sequence - L.major:78 P.knowlesi:78

Q4Q0K2              	100.00%		B3KZM3              	100.00%
Bootstrap support for Q4Q0K2 as seed ortholog is 100%.
Bootstrap support for B3KZM3 as seed ortholog is 100%.

Group of orthologs #780. Best score 78 bits
Score difference with first non-orthologous sequence - L.major:78 P.knowlesi:78

Q4Q8V7              	100.00%		B3L554              	100.00%
Bootstrap support for Q4Q8V7 as seed ortholog is 100%.
Bootstrap support for B3L554 as seed ortholog is 100%.

Group of orthologs #781. Best score 78 bits
Score difference with first non-orthologous sequence - L.major:78 P.knowlesi:78

Q4QG90              	100.00%		B3KZ07              	100.00%
Bootstrap support for Q4QG90 as seed ortholog is 100%.
Bootstrap support for B3KZ07 as seed ortholog is 100%.

Group of orthologs #782. Best score 78 bits
Score difference with first non-orthologous sequence - L.major:22 P.knowlesi:78

Q4Q6W3              	100.00%		B3LBV3              	100.00%
Bootstrap support for Q4Q6W3 as seed ortholog is 75%.
Bootstrap support for B3LBV3 as seed ortholog is 100%.

Group of orthologs #783. Best score 78 bits
Score difference with first non-orthologous sequence - L.major:78 P.knowlesi:78

Q4QIX1              	100.00%		B3L869              	100.00%
Bootstrap support for Q4QIX1 as seed ortholog is 100%.
Bootstrap support for B3L869 as seed ortholog is 100%.

Group of orthologs #784. Best score 77 bits
Score difference with first non-orthologous sequence - L.major:77 P.knowlesi:77

Q4QB09              	100.00%		B3L4W2              	100.00%
Q4QB07              	8.29%		B3L5X9              	5.42%
                    	       		B3L7V6              	5.22%
Bootstrap support for Q4QB09 as seed ortholog is 100%.
Bootstrap support for B3L4W2 as seed ortholog is 100%.

Group of orthologs #785. Best score 77 bits
Score difference with first non-orthologous sequence - L.major:77 P.knowlesi:77

E9AET3              	100.00%		B3L136              	100.00%
Bootstrap support for E9AET3 as seed ortholog is 100%.
Bootstrap support for B3L136 as seed ortholog is 100%.

Group of orthologs #786. Best score 77 bits
Score difference with first non-orthologous sequence - L.major:77 P.knowlesi:77

Q4Q0X2              	100.00%		B3L174              	100.00%
Bootstrap support for Q4Q0X2 as seed ortholog is 100%.
Bootstrap support for B3L174 as seed ortholog is 100%.

Group of orthologs #787. Best score 77 bits
Score difference with first non-orthologous sequence - L.major:77 P.knowlesi:77

Q4QDA3              	100.00%		B3L267              	100.00%
Bootstrap support for Q4QDA3 as seed ortholog is 100%.
Bootstrap support for B3L267 as seed ortholog is 100%.

Group of orthologs #788. Best score 77 bits
Score difference with first non-orthologous sequence - L.major:77 P.knowlesi:77

Q4QEZ1              	100.00%		B3L433              	100.00%
Bootstrap support for Q4QEZ1 as seed ortholog is 100%.
Bootstrap support for B3L433 as seed ortholog is 100%.

Group of orthologs #789. Best score 76 bits
Score difference with first non-orthologous sequence - L.major:76 P.knowlesi:76

Q4Q9D2              	100.00%		B3LCE8              	100.00%
Q4Q9D0              	97.48%		
Bootstrap support for Q4Q9D2 as seed ortholog is 100%.
Bootstrap support for B3LCE8 as seed ortholog is 100%.

Group of orthologs #790. Best score 76 bits
Score difference with first non-orthologous sequence - L.major:76 P.knowlesi:76

E9AFU9              	100.00%		B3L5D7              	100.00%
Bootstrap support for E9AFU9 as seed ortholog is 100%.
Bootstrap support for B3L5D7 as seed ortholog is 100%.

Group of orthologs #791. Best score 76 bits
Score difference with first non-orthologous sequence - L.major:76 P.knowlesi:76

Q4Q627              	100.00%		B3LC44              	100.00%
Bootstrap support for Q4Q627 as seed ortholog is 100%.
Bootstrap support for B3LC44 as seed ortholog is 100%.

Group of orthologs #792. Best score 76 bits
Score difference with first non-orthologous sequence - L.major:4 P.knowlesi:76

Q4QFH2              	100.00%		B3L3A0              	100.00%
Bootstrap support for Q4QFH2 as seed ortholog is 54%.
Alternative seed ortholog is Q4QA75 (4 bits away from this cluster)
Bootstrap support for B3L3A0 as seed ortholog is 100%.

Group of orthologs #793. Best score 75 bits
Score difference with first non-orthologous sequence - L.major:75 P.knowlesi:75

Q4QAV3              	100.00%		B3L1W1              	100.00%
Q4Q3S3              	7.69%		
Bootstrap support for Q4QAV3 as seed ortholog is 100%.
Bootstrap support for B3L1W1 as seed ortholog is 100%.

Group of orthologs #794. Best score 75 bits
Score difference with first non-orthologous sequence - L.major:75 P.knowlesi:75

E9ADC3              	100.00%		B3LAZ0              	100.00%
Bootstrap support for E9ADC3 as seed ortholog is 100%.
Bootstrap support for B3LAZ0 as seed ortholog is 100%.

Group of orthologs #795. Best score 75 bits
Score difference with first non-orthologous sequence - L.major:75 P.knowlesi:75

E9ADZ0              	100.00%		B3LAG4              	100.00%
Bootstrap support for E9ADZ0 as seed ortholog is 100%.
Bootstrap support for B3LAG4 as seed ortholog is 100%.

Group of orthologs #796. Best score 75 bits
Score difference with first non-orthologous sequence - L.major:75 P.knowlesi:75

Q4Q2X8              	100.00%		B3L6Y6              	100.00%
Bootstrap support for Q4Q2X8 as seed ortholog is 100%.
Bootstrap support for B3L6Y6 as seed ortholog is 100%.

Group of orthologs #797. Best score 75 bits
Score difference with first non-orthologous sequence - L.major:75 P.knowlesi:75

Q5QHQ6              	100.00%		B3L6L7              	100.00%
Bootstrap support for Q5QHQ6 as seed ortholog is 100%.
Bootstrap support for B3L6L7 as seed ortholog is 100%.

Group of orthologs #798. Best score 74 bits
Score difference with first non-orthologous sequence - L.major:74 P.knowlesi:74

Q4Q6E9              	100.00%		B3L336              	100.00%
                    	       		B3L0Y4              	40.00%
                    	       		B3KZ43              	37.90%
                    	       		B3L1R3              	33.46%
                    	       		B3KZ42              	29.75%
Bootstrap support for Q4Q6E9 as seed ortholog is 100%.
Bootstrap support for B3L336 as seed ortholog is 100%.

Group of orthologs #799. Best score 74 bits
Score difference with first non-orthologous sequence - L.major:74 P.knowlesi:74

Q4Q5J7              	100.00%		B3L7Z1              	100.00%
Bootstrap support for Q4Q5J7 as seed ortholog is 100%.
Bootstrap support for B3L7Z1 as seed ortholog is 100%.

Group of orthologs #800. Best score 74 bits
Score difference with first non-orthologous sequence - L.major:74 P.knowlesi:74

Q4QDS7              	100.00%		B3L0K0              	100.00%
Bootstrap support for Q4QDS7 as seed ortholog is 100%.
Bootstrap support for B3L0K0 as seed ortholog is 100%.

Group of orthologs #801. Best score 74 bits
Score difference with first non-orthologous sequence - L.major:74 P.knowlesi:74

Q4QES4              	100.00%		B3L000              	100.00%
Bootstrap support for Q4QES4 as seed ortholog is 100%.
Bootstrap support for B3L000 as seed ortholog is 100%.

Group of orthologs #802. Best score 74 bits
Score difference with first non-orthologous sequence - L.major:74 P.knowlesi:74

Q4QGA2              	100.00%		B3L0Z8              	100.00%
Bootstrap support for Q4QGA2 as seed ortholog is 100%.
Bootstrap support for B3L0Z8 as seed ortholog is 100%.

Group of orthologs #803. Best score 74 bits
Score difference with first non-orthologous sequence - L.major:22 P.knowlesi:33

Q4QG36              	100.00%		B3L2U6              	100.00%
Bootstrap support for Q4QG36 as seed ortholog is 87%.
Bootstrap support for B3L2U6 as seed ortholog is 95%.

Group of orthologs #804. Best score 74 bits
Score difference with first non-orthologous sequence - L.major:74 P.knowlesi:74

Q4QAF7              	100.00%		B3L9P5              	100.00%
Bootstrap support for Q4QAF7 as seed ortholog is 100%.
Bootstrap support for B3L9P5 as seed ortholog is 100%.

Group of orthologs #805. Best score 73 bits
Score difference with first non-orthologous sequence - L.major:28 P.knowlesi:24

E9ACV5              	100.00%		B3LBJ3              	100.00%
Q4QIG6              	6.59%		
Bootstrap support for E9ACV5 as seed ortholog is 76%.
Bootstrap support for B3LBJ3 as seed ortholog is 85%.

Group of orthologs #806. Best score 73 bits
Score difference with first non-orthologous sequence - L.major:73 P.knowlesi:73

E9AFS3              	100.00%		B3L576              	100.00%
Bootstrap support for E9AFS3 as seed ortholog is 100%.
Bootstrap support for B3L576 as seed ortholog is 100%.

Group of orthologs #807. Best score 73 bits
Score difference with first non-orthologous sequence - L.major:73 P.knowlesi:73

E9AF17              	100.00%		B3LB85              	100.00%
Bootstrap support for E9AF17 as seed ortholog is 100%.
Bootstrap support for B3LB85 as seed ortholog is 100%.

Group of orthologs #808. Best score 73 bits
Score difference with first non-orthologous sequence - L.major:73 P.knowlesi:73

Q4QIJ4              	100.00%		B3LCF2              	100.00%
Bootstrap support for Q4QIJ4 as seed ortholog is 100%.
Bootstrap support for B3LCF2 as seed ortholog is 100%.

Group of orthologs #809. Best score 72 bits
Score difference with first non-orthologous sequence - L.major:72 P.knowlesi:30

Q4Q5H1              	100.00%		B3LC98              	100.00%
Q4Q5H0              	28.65%		
E9AFF7              	8.51%		
Bootstrap support for Q4Q5H1 as seed ortholog is 100%.
Bootstrap support for B3LC98 as seed ortholog is 81%.

Group of orthologs #810. Best score 72 bits
Score difference with first non-orthologous sequence - L.major:72 P.knowlesi:72

Q4QFX0              	100.00%		B3L0N3              	100.00%
Q4Q5X4              	14.70%		
Bootstrap support for Q4QFX0 as seed ortholog is 100%.
Bootstrap support for B3L0N3 as seed ortholog is 100%.

Group of orthologs #811. Best score 72 bits
Score difference with first non-orthologous sequence - L.major:72 P.knowlesi:15

Q4Q4Z4              	100.00%		B3L2I5              	100.00%
Bootstrap support for Q4Q4Z4 as seed ortholog is 100%.
Bootstrap support for B3L2I5 as seed ortholog is 60%.
Alternative seed ortholog is B3L728 (15 bits away from this cluster)

Group of orthologs #812. Best score 72 bits
Score difference with first non-orthologous sequence - L.major:14 P.knowlesi:72

E9AFS4              	100.00%		B3L9N2              	100.00%
Bootstrap support for E9AFS4 as seed ortholog is 62%.
Alternative seed ortholog is Q4Q3I7 (14 bits away from this cluster)
Bootstrap support for B3L9N2 as seed ortholog is 100%.

Group of orthologs #813. Best score 72 bits
Score difference with first non-orthologous sequence - L.major:72 P.knowlesi:72

Q4Q931              	100.00%		B3L9F1              	100.00%
Bootstrap support for Q4Q931 as seed ortholog is 100%.
Bootstrap support for B3L9F1 as seed ortholog is 100%.

Group of orthologs #814. Best score 72 bits
Score difference with first non-orthologous sequence - L.major:72 P.knowlesi:72

Q4QBJ4              	100.00%		B3L9Y0              	100.00%
Bootstrap support for Q4QBJ4 as seed ortholog is 100%.
Bootstrap support for B3L9Y0 as seed ortholog is 100%.

Group of orthologs #815. Best score 71 bits
Score difference with first non-orthologous sequence - L.major:71 P.knowlesi:71

E9AF95              	100.00%		B3LD71              	100.00%
Q4Q454              	7.16%		
Bootstrap support for E9AF95 as seed ortholog is 100%.
Bootstrap support for B3LD71 as seed ortholog is 100%.

Group of orthologs #816. Best score 71 bits
Score difference with first non-orthologous sequence - L.major:8 P.knowlesi:71

E9AFS7              	100.00%		B3L7G4              	100.00%
Bootstrap support for E9AFS7 as seed ortholog is 65%.
Alternative seed ortholog is Q4QEV4 (8 bits away from this cluster)
Bootstrap support for B3L7G4 as seed ortholog is 100%.

Group of orthologs #817. Best score 71 bits
Score difference with first non-orthologous sequence - L.major:71 P.knowlesi:71

Q4Q6V9              	100.00%		B3L3Q7              	100.00%
Bootstrap support for Q4Q6V9 as seed ortholog is 100%.
Bootstrap support for B3L3Q7 as seed ortholog is 100%.

Group of orthologs #818. Best score 71 bits
Score difference with first non-orthologous sequence - L.major:71 P.knowlesi:71

Q4Q9N3              	100.00%		B3L3N5              	100.00%
Bootstrap support for Q4Q9N3 as seed ortholog is 100%.
Bootstrap support for B3L3N5 as seed ortholog is 100%.

Group of orthologs #819. Best score 71 bits
Score difference with first non-orthologous sequence - L.major:71 P.knowlesi:71

Q4Q8L9              	100.00%		B3L7Y6              	100.00%
Bootstrap support for Q4Q8L9 as seed ortholog is 100%.
Bootstrap support for B3L7Y6 as seed ortholog is 100%.

Group of orthologs #820. Best score 71 bits
Score difference with first non-orthologous sequence - L.major:71 P.knowlesi:71

Q86MW5              	100.00%		B3L5S2              	100.00%
Bootstrap support for Q86MW5 as seed ortholog is 100%.
Bootstrap support for B3L5S2 as seed ortholog is 100%.

Group of orthologs #821. Best score 70 bits
Score difference with first non-orthologous sequence - L.major:70 P.knowlesi:23

E9AF44              	100.00%		B3L3J9              	100.00%
Bootstrap support for E9AF44 as seed ortholog is 100%.
Bootstrap support for B3L3J9 as seed ortholog is 70%.
Alternative seed ortholog is B3L728 (23 bits away from this cluster)

Group of orthologs #822. Best score 70 bits
Score difference with first non-orthologous sequence - L.major:70 P.knowlesi:70

Q4Q3L7              	100.00%		B3L0G8              	100.00%
Bootstrap support for Q4Q3L7 as seed ortholog is 100%.
Bootstrap support for B3L0G8 as seed ortholog is 100%.

Group of orthologs #823. Best score 70 bits
Score difference with first non-orthologous sequence - L.major:70 P.knowlesi:70

Q4Q2B2              	100.00%		B3LBQ7              	100.00%
Bootstrap support for Q4Q2B2 as seed ortholog is 100%.
Bootstrap support for B3LBQ7 as seed ortholog is 100%.

Group of orthologs #824. Best score 69 bits
Score difference with first non-orthologous sequence - L.major:69 P.knowlesi:69

Q66NE2              	100.00%		B3L409              	100.00%
Q4Q3C1              	64.83%		B3L3E3              	16.53%
Bootstrap support for Q66NE2 as seed ortholog is 100%.
Bootstrap support for B3L409 as seed ortholog is 100%.

Group of orthologs #825. Best score 69 bits
Score difference with first non-orthologous sequence - L.major:69 P.knowlesi:69

E9AF13              	100.00%		B3L4P5              	100.00%
Q4QCE1              	100.00%		
Bootstrap support for E9AF13 as seed ortholog is 100%.
Bootstrap support for Q4QCE1 as seed ortholog is 100%.
Bootstrap support for B3L4P5 as seed ortholog is 100%.

Group of orthologs #826. Best score 69 bits
Score difference with first non-orthologous sequence - L.major:69 P.knowlesi:69

Q4Q3G4              	100.00%		B3LAG6              	100.00%
Q4Q9X4              	100.00%		
Bootstrap support for Q4Q3G4 as seed ortholog is 100%.
Bootstrap support for Q4Q9X4 as seed ortholog is 100%.
Bootstrap support for B3LAG6 as seed ortholog is 100%.

Group of orthologs #827. Best score 69 bits
Score difference with first non-orthologous sequence - L.major:69 P.knowlesi:69

Q4Q8S8              	100.00%		B3LCH2              	100.00%
Bootstrap support for Q4Q8S8 as seed ortholog is 100%.
Bootstrap support for B3LCH2 as seed ortholog is 100%.

Group of orthologs #828. Best score 69 bits
Score difference with first non-orthologous sequence - L.major:69 P.knowlesi:69

Q4QAI2              	100.00%		B3LD31              	100.00%
Bootstrap support for Q4QAI2 as seed ortholog is 100%.
Bootstrap support for B3LD31 as seed ortholog is 100%.

Group of orthologs #829. Best score 68 bits
Score difference with first non-orthologous sequence - L.major:68 P.knowlesi:68

E9AEI8              	100.00%		B3L1H2              	100.00%
Bootstrap support for E9AEI8 as seed ortholog is 100%.
Bootstrap support for B3L1H2 as seed ortholog is 100%.

Group of orthologs #830. Best score 68 bits
Score difference with first non-orthologous sequence - L.major:68 P.knowlesi:68

E9ACI8              	100.00%		B3L4I3              	100.00%
Bootstrap support for E9ACI8 as seed ortholog is 100%.
Bootstrap support for B3L4I3 as seed ortholog is 100%.

Group of orthologs #831. Best score 68 bits
Score difference with first non-orthologous sequence - L.major:68 P.knowlesi:68

Q4Q9J0              	100.00%		B3L246              	100.00%
Bootstrap support for Q4Q9J0 as seed ortholog is 100%.
Bootstrap support for B3L246 as seed ortholog is 100%.

Group of orthologs #832. Best score 67 bits
Score difference with first non-orthologous sequence - L.major:67 P.knowlesi:67

Q4QCC2              	100.00%		B3L3R4              	100.00%
Q4QCC3              	15.05%		
Bootstrap support for Q4QCC2 as seed ortholog is 100%.
Bootstrap support for B3L3R4 as seed ortholog is 100%.

Group of orthologs #833. Best score 67 bits
Score difference with first non-orthologous sequence - L.major:67 P.knowlesi:67

E9AD06              	100.00%		B3L0R8              	100.00%
Bootstrap support for E9AD06 as seed ortholog is 100%.
Bootstrap support for B3L0R8 as seed ortholog is 100%.

Group of orthologs #834. Best score 67 bits
Score difference with first non-orthologous sequence - L.major:67 P.knowlesi:67

E9AC87              	100.00%		B3L7K8              	100.00%
Bootstrap support for E9AC87 as seed ortholog is 100%.
Bootstrap support for B3L7K8 as seed ortholog is 100%.

Group of orthologs #835. Best score 67 bits
Score difference with first non-orthologous sequence - L.major:67 P.knowlesi:67

Q4Q734              	100.00%		B3L2Q6              	100.00%
Bootstrap support for Q4Q734 as seed ortholog is 100%.
Bootstrap support for B3L2Q6 as seed ortholog is 100%.

Group of orthologs #836. Best score 67 bits
Score difference with first non-orthologous sequence - L.major:67 P.knowlesi:67

Q4Q9Z2              	100.00%		B3L0Q4              	100.00%
Bootstrap support for Q4Q9Z2 as seed ortholog is 100%.
Bootstrap support for B3L0Q4 as seed ortholog is 100%.

Group of orthologs #837. Best score 67 bits
Score difference with first non-orthologous sequence - L.major:67 P.knowlesi:67

Q4QGU3              	100.00%		B3L105              	100.00%
Bootstrap support for Q4QGU3 as seed ortholog is 100%.
Bootstrap support for B3L105 as seed ortholog is 100%.

Group of orthologs #838. Best score 67 bits
Score difference with first non-orthologous sequence - L.major:67 P.knowlesi:67

Q4QGG6              	100.00%		B3L7U6              	100.00%
Bootstrap support for Q4QGG6 as seed ortholog is 100%.
Bootstrap support for B3L7U6 as seed ortholog is 100%.

Group of orthologs #839. Best score 67 bits
Score difference with first non-orthologous sequence - L.major:67 P.knowlesi:67

Q4QHE1              	100.00%		B3L899              	100.00%
Bootstrap support for Q4QHE1 as seed ortholog is 100%.
Bootstrap support for B3L899 as seed ortholog is 100%.

Group of orthologs #840. Best score 67 bits
Score difference with first non-orthologous sequence - L.major:67 P.knowlesi:67

Q4QG15              	100.00%		B3LAJ7              	100.00%
Bootstrap support for Q4QG15 as seed ortholog is 100%.
Bootstrap support for B3LAJ7 as seed ortholog is 100%.

Group of orthologs #841. Best score 66 bits
Score difference with first non-orthologous sequence - L.major:66 P.knowlesi:66

E9AEL0              	100.00%		B3L025              	100.00%
Bootstrap support for E9AEL0 as seed ortholog is 100%.
Bootstrap support for B3L025 as seed ortholog is 100%.

Group of orthologs #842. Best score 66 bits
Score difference with first non-orthologous sequence - L.major:66 P.knowlesi:66

E9AC24              	100.00%		B3L8I8              	100.00%
Bootstrap support for E9AC24 as seed ortholog is 100%.
Bootstrap support for B3L8I8 as seed ortholog is 100%.

Group of orthologs #843. Best score 66 bits
Score difference with first non-orthologous sequence - L.major:66 P.knowlesi:66

E9AFF6              	100.00%		B3LBB5              	100.00%
Bootstrap support for E9AFF6 as seed ortholog is 100%.
Bootstrap support for B3LBB5 as seed ortholog is 100%.

Group of orthologs #844. Best score 66 bits
Score difference with first non-orthologous sequence - L.major:66 P.knowlesi:66

Q4Q138              	100.00%		B3LAD0              	100.00%
Bootstrap support for Q4Q138 as seed ortholog is 100%.
Bootstrap support for B3LAD0 as seed ortholog is 100%.

Group of orthologs #845. Best score 66 bits
Score difference with first non-orthologous sequence - L.major:66 P.knowlesi:66

Q4QD71              	100.00%		B3L6K8              	100.00%
Bootstrap support for Q4QD71 as seed ortholog is 100%.
Bootstrap support for B3L6K8 as seed ortholog is 100%.

Group of orthologs #846. Best score 66 bits
Score difference with first non-orthologous sequence - L.major:66 P.knowlesi:66

Q4QHC9              	100.00%		B3LAP2              	100.00%
Bootstrap support for Q4QHC9 as seed ortholog is 100%.
Bootstrap support for B3LAP2 as seed ortholog is 100%.

Group of orthologs #847. Best score 65 bits
Score difference with first non-orthologous sequence - L.major:65 P.knowlesi:65

Q4Q7P0              	100.00%		B3L0G4              	100.00%
Bootstrap support for Q4Q7P0 as seed ortholog is 100%.
Bootstrap support for B3L0G4 as seed ortholog is 100%.

Group of orthologs #848. Best score 65 bits
Score difference with first non-orthologous sequence - L.major:65 P.knowlesi:65

Q4Q0A5              	100.00%		B3LB59              	100.00%
Bootstrap support for Q4Q0A5 as seed ortholog is 100%.
Bootstrap support for B3LB59 as seed ortholog is 100%.

Group of orthologs #849. Best score 65 bits
Score difference with first non-orthologous sequence - L.major:65 P.knowlesi:65

Q4Q8P3              	100.00%		B3L3U3              	100.00%
Bootstrap support for Q4Q8P3 as seed ortholog is 100%.
Bootstrap support for B3L3U3 as seed ortholog is 100%.

Group of orthologs #850. Best score 65 bits
Score difference with first non-orthologous sequence - L.major:65 P.knowlesi:65

Q4QH22              	100.00%		B3LCW6              	100.00%
Bootstrap support for Q4QH22 as seed ortholog is 100%.
Bootstrap support for B3LCW6 as seed ortholog is 100%.

Group of orthologs #851. Best score 64 bits
Score difference with first non-orthologous sequence - L.major:64 P.knowlesi:64

E9AFM7              	100.00%		B3L1B3              	100.00%
Bootstrap support for E9AFM7 as seed ortholog is 100%.
Bootstrap support for B3L1B3 as seed ortholog is 100%.

Group of orthologs #852. Best score 64 bits
Score difference with first non-orthologous sequence - L.major:64 P.knowlesi:64

E9AFT6              	100.00%		B3L2V1              	100.00%
Bootstrap support for E9AFT6 as seed ortholog is 100%.
Bootstrap support for B3L2V1 as seed ortholog is 100%.

Group of orthologs #853. Best score 64 bits
Score difference with first non-orthologous sequence - L.major:64 P.knowlesi:64

Q4Q817              	100.00%		B3KZ04              	100.00%
Bootstrap support for Q4Q817 as seed ortholog is 100%.
Bootstrap support for B3KZ04 as seed ortholog is 100%.

Group of orthologs #854. Best score 64 bits
Score difference with first non-orthologous sequence - L.major:64 P.knowlesi:64

Q4Q5R8              	100.00%		B3L6S2              	100.00%
Bootstrap support for Q4Q5R8 as seed ortholog is 100%.
Bootstrap support for B3L6S2 as seed ortholog is 100%.

Group of orthologs #855. Best score 64 bits
Score difference with first non-orthologous sequence - L.major:64 P.knowlesi:64

Q4Q7I2              	100.00%		B3L891              	100.00%
Bootstrap support for Q4Q7I2 as seed ortholog is 100%.
Bootstrap support for B3L891 as seed ortholog is 100%.

Group of orthologs #856. Best score 64 bits
Score difference with first non-orthologous sequence - L.major:64 P.knowlesi:64

Q4Q860              	100.00%		B3LAK8              	100.00%
Bootstrap support for Q4Q860 as seed ortholog is 100%.
Bootstrap support for B3LAK8 as seed ortholog is 100%.

Group of orthologs #857. Best score 64 bits
Score difference with first non-orthologous sequence - L.major:64 P.knowlesi:64

Q4QCB6              	100.00%		B3L6N7              	100.00%
Bootstrap support for Q4QCB6 as seed ortholog is 100%.
Bootstrap support for B3L6N7 as seed ortholog is 100%.

Group of orthologs #858. Best score 64 bits
Score difference with first non-orthologous sequence - L.major:64 P.knowlesi:64

Q4QIW9              	100.00%		B3L1X5              	100.00%
Bootstrap support for Q4QIW9 as seed ortholog is 100%.
Bootstrap support for B3L1X5 as seed ortholog is 100%.

Group of orthologs #859. Best score 64 bits
Score difference with first non-orthologous sequence - L.major:64 P.knowlesi:64

Q4QD11              	100.00%		B3L9P6              	100.00%
Bootstrap support for Q4QD11 as seed ortholog is 100%.
Bootstrap support for B3L9P6 as seed ortholog is 100%.

Group of orthologs #860. Best score 64 bits
Score difference with first non-orthologous sequence - L.major:64 P.knowlesi:64

Q4QJA0              	100.00%		B3LCU0              	100.00%
Bootstrap support for Q4QJA0 as seed ortholog is 100%.
Bootstrap support for B3LCU0 as seed ortholog is 100%.

Group of orthologs #861. Best score 63 bits
Score difference with first non-orthologous sequence - L.major:63 P.knowlesi:63

E9AF40              	100.00%		B3L258              	100.00%
Bootstrap support for E9AF40 as seed ortholog is 100%.
Bootstrap support for B3L258 as seed ortholog is 100%.

Group of orthologs #862. Best score 62 bits
Score difference with first non-orthologous sequence - L.major:62 P.knowlesi:62

Q4QD58              	100.00%		B3L0N5              	100.00%
Q4Q726              	22.91%		
Bootstrap support for Q4QD58 as seed ortholog is 100%.
Bootstrap support for B3L0N5 as seed ortholog is 100%.

Group of orthologs #863. Best score 62 bits
Score difference with first non-orthologous sequence - L.major:62 P.knowlesi:62

Q4Q0W7              	100.00%		B3L925              	100.00%
Bootstrap support for Q4Q0W7 as seed ortholog is 100%.
Bootstrap support for B3L925 as seed ortholog is 100%.

Group of orthologs #864. Best score 62 bits
Score difference with first non-orthologous sequence - L.major:62 P.knowlesi:62

Q4Q1W6              	100.00%		B3LBQ3              	100.00%
Bootstrap support for Q4Q1W6 as seed ortholog is 100%.
Bootstrap support for B3LBQ3 as seed ortholog is 100%.

Group of orthologs #865. Best score 62 bits
Score difference with first non-orthologous sequence - L.major:62 P.knowlesi:62

Q4Q8X0              	100.00%		B3L5A8              	100.00%
Bootstrap support for Q4Q8X0 as seed ortholog is 100%.
Bootstrap support for B3L5A8 as seed ortholog is 100%.

Group of orthologs #866. Best score 62 bits
Score difference with first non-orthologous sequence - L.major:62 P.knowlesi:62

Q4QFB2              	100.00%		B3L1Y0              	100.00%
Bootstrap support for Q4QFB2 as seed ortholog is 100%.
Bootstrap support for B3L1Y0 as seed ortholog is 100%.

Group of orthologs #867. Best score 62 bits
Score difference with first non-orthologous sequence - L.major:62 P.knowlesi:62

Q4QBJ1              	100.00%		B3LA74              	100.00%
Bootstrap support for Q4QBJ1 as seed ortholog is 100%.
Bootstrap support for B3LA74 as seed ortholog is 100%.

Group of orthologs #868. Best score 61 bits
Score difference with first non-orthologous sequence - L.major:12 P.knowlesi:61

E9AD18              	100.00%		B3LBA2              	100.00%
                    	       		B3L8S8              	8.66%
Bootstrap support for E9AD18 as seed ortholog is 70%.
Alternative seed ortholog is Q4QE09 (12 bits away from this cluster)
Bootstrap support for B3LBA2 as seed ortholog is 100%.

Group of orthologs #869. Best score 61 bits
Score difference with first non-orthologous sequence - L.major:61 P.knowlesi:61

Q4QHP5              	100.00%		B3L3K0              	100.00%
Q4QHP4              	42.27%		
Bootstrap support for Q4QHP5 as seed ortholog is 100%.
Bootstrap support for B3L3K0 as seed ortholog is 100%.

Group of orthologs #870. Best score 61 bits
Score difference with first non-orthologous sequence - L.major:61 P.knowlesi:61

Q4Q2F6              	100.00%		B3L3B0              	100.00%
Bootstrap support for Q4Q2F6 as seed ortholog is 100%.
Bootstrap support for B3L3B0 as seed ortholog is 100%.

Group of orthologs #871. Best score 61 bits
Score difference with first non-orthologous sequence - L.major:20 P.knowlesi:61

Q4Q503              	100.00%		B3L492              	100.00%
Bootstrap support for Q4Q503 as seed ortholog is 75%.
Bootstrap support for B3L492 as seed ortholog is 100%.

Group of orthologs #872. Best score 61 bits
Score difference with first non-orthologous sequence - L.major:61 P.knowlesi:61

E9ADD4              	100.00%		B3LBL0              	100.00%
Bootstrap support for E9ADD4 as seed ortholog is 100%.
Bootstrap support for B3LBL0 as seed ortholog is 100%.

Group of orthologs #873. Best score 61 bits
Score difference with first non-orthologous sequence - L.major:61 P.knowlesi:61

Q4QA12              	100.00%		B3L355              	100.00%
Bootstrap support for Q4QA12 as seed ortholog is 100%.
Bootstrap support for B3L355 as seed ortholog is 100%.

Group of orthologs #874. Best score 61 bits
Score difference with first non-orthologous sequence - L.major:61 P.knowlesi:61

Q4QGF2              	100.00%		B3L125              	100.00%
Bootstrap support for Q4QGF2 as seed ortholog is 100%.
Bootstrap support for B3L125 as seed ortholog is 100%.

Group of orthologs #875. Best score 61 bits
Score difference with first non-orthologous sequence - L.major:61 P.knowlesi:61

Q4QHD5              	100.00%		B3LD90              	100.00%
Bootstrap support for Q4QHD5 as seed ortholog is 100%.
Bootstrap support for B3LD90 as seed ortholog is 100%.

Group of orthologs #876. Best score 60 bits
Score difference with first non-orthologous sequence - L.major:20 P.knowlesi:19

E9AC16              	100.00%		B3L9J3              	100.00%
                    	       		B3L2S1              	7.33%
Bootstrap support for E9AC16 as seed ortholog is 89%.
Bootstrap support for B3L9J3 as seed ortholog is 85%.

Group of orthologs #877. Best score 60 bits
Score difference with first non-orthologous sequence - L.major:60 P.knowlesi:60

Q4QDM7              	100.00%		B3L1L8              	100.00%
Bootstrap support for Q4QDM7 as seed ortholog is 100%.
Bootstrap support for B3L1L8 as seed ortholog is 100%.

Group of orthologs #878. Best score 60 bits
Score difference with first non-orthologous sequence - L.major:60 P.knowlesi:60

Q4Q3H8              	100.00%		B3LCQ7              	100.00%
Bootstrap support for Q4Q3H8 as seed ortholog is 100%.
Bootstrap support for B3LCQ7 as seed ortholog is 100%.

Group of orthologs #879. Best score 60 bits
Score difference with first non-orthologous sequence - L.major:60 P.knowlesi:18

Q4QBP1              	100.00%		B3L560              	100.00%
Bootstrap support for Q4QBP1 as seed ortholog is 100%.
Bootstrap support for B3L560 as seed ortholog is 82%.

Group of orthologs #880. Best score 59 bits
Score difference with first non-orthologous sequence - L.major:17 P.knowlesi:59

E9AD58              	100.00%		B3L4D3              	100.00%
Bootstrap support for E9AD58 as seed ortholog is 81%.
Bootstrap support for B3L4D3 as seed ortholog is 100%.

Group of orthologs #881. Best score 57 bits
Score difference with first non-orthologous sequence - L.major:57 P.knowlesi:57

E9AF90              	100.00%		B3L3P5              	100.00%
Bootstrap support for E9AF90 as seed ortholog is 100%.
Bootstrap support for B3L3P5 as seed ortholog is 100%.

Group of orthologs #882. Best score 57 bits
Score difference with first non-orthologous sequence - L.major:57 P.knowlesi:57

Q4Q244              	100.00%		B3LBG4              	100.00%
Bootstrap support for Q4Q244 as seed ortholog is 100%.
Bootstrap support for B3LBG4 as seed ortholog is 100%.

Group of orthologs #883. Best score 57 bits
Score difference with first non-orthologous sequence - L.major:13 P.knowlesi:57

Q4QAC6              	100.00%		B3L6A9              	100.00%
Bootstrap support for Q4QAC6 as seed ortholog is 79%.
Bootstrap support for B3L6A9 as seed ortholog is 100%.

Group of orthologs #884. Best score 56 bits
Score difference with first non-orthologous sequence - L.major:56 P.knowlesi:56

Q4Q709              	100.00%		B3L8A8              	100.00%
                    	       		B3L926              	5.06%
Bootstrap support for Q4Q709 as seed ortholog is 100%.
Bootstrap support for B3L8A8 as seed ortholog is 100%.

Group of orthologs #885. Best score 56 bits
Score difference with first non-orthologous sequence - L.major:56 P.knowlesi:56

Q4Q6S8              	100.00%		B3L5S8              	100.00%
Bootstrap support for Q4Q6S8 as seed ortholog is 100%.
Bootstrap support for B3L5S8 as seed ortholog is 100%.

Group of orthologs #886. Best score 56 bits
Score difference with first non-orthologous sequence - L.major:56 P.knowlesi:56

Q4QAX0              	100.00%		B3L995              	100.00%
Bootstrap support for Q4QAX0 as seed ortholog is 100%.
Bootstrap support for B3L995 as seed ortholog is 100%.

Group of orthologs #887. Best score 55 bits
Score difference with first non-orthologous sequence - L.major:55 P.knowlesi:55

E9ACN7              	100.00%		B3L917              	100.00%
Q4QJC1              	11.08%		
Q4QA90              	10.57%		
Bootstrap support for E9ACN7 as seed ortholog is 100%.
Bootstrap support for B3L917 as seed ortholog is 100%.

Group of orthologs #888. Best score 55 bits
Score difference with first non-orthologous sequence - L.major:55 P.knowlesi:55

Q4QAC1              	100.00%		B3L562              	100.00%
                    	       		B3LCD0              	7.56%
                    	       		B3L563              	7.00%
Bootstrap support for Q4QAC1 as seed ortholog is 100%.
Bootstrap support for B3L562 as seed ortholog is 100%.

Group of orthologs #889. Best score 55 bits
Score difference with first non-orthologous sequence - L.major:55 P.knowlesi:55

E9ACU8              	100.00%		B3L0U9              	100.00%
Q4QHJ9              	13.58%		
Bootstrap support for E9ACU8 as seed ortholog is 100%.
Bootstrap support for B3L0U9 as seed ortholog is 100%.

Group of orthologs #890. Best score 55 bits
Score difference with first non-orthologous sequence - L.major:55 P.knowlesi:55

Q4QED0              	100.00%		B3LCA9              	100.00%
Q4QED2              	83.45%		
Bootstrap support for Q4QED0 as seed ortholog is 100%.
Bootstrap support for B3LCA9 as seed ortholog is 100%.

Group of orthologs #891. Best score 54 bits
Score difference with first non-orthologous sequence - L.major:54 P.knowlesi:54

Q4Q1B5              	100.00%		B3LCN8              	100.00%
Bootstrap support for Q4Q1B5 as seed ortholog is 100%.
Bootstrap support for B3LCN8 as seed ortholog is 100%.

Group of orthologs #892. Best score 54 bits
Score difference with first non-orthologous sequence - L.major:54 P.knowlesi:54

Q4Q8I8              	100.00%		B3LCD3              	100.00%
Bootstrap support for Q4Q8I8 as seed ortholog is 100%.
Bootstrap support for B3LCD3 as seed ortholog is 100%.

Group of orthologs #893. Best score 54 bits
Score difference with first non-orthologous sequence - L.major:54 P.knowlesi:54

Q4QA54              	100.00%		B3LC71              	100.00%
Bootstrap support for Q4QA54 as seed ortholog is 100%.
Bootstrap support for B3LC71 as seed ortholog is 100%.

Group of orthologs #894. Best score 53 bits
Score difference with first non-orthologous sequence - L.major:9 P.knowlesi:12

Q4QA45              	100.00%		B3LC22              	100.00%
Q4QA46              	100.00%		
Q4QA43              	13.95%		
E9AEE5              	7.94%		
Bootstrap support for Q4QA45 as seed ortholog is 72%.
Alternative seed ortholog is Q4QI29 (9 bits away from this cluster)
Bootstrap support for Q4QA46 as seed ortholog is 73%.
Alternative seed ortholog is Q4QI29 (9 bits away from this cluster)
Bootstrap support for B3LC22 as seed ortholog is 77%.

Group of orthologs #895. Best score 53 bits
Score difference with first non-orthologous sequence - L.major:53 P.knowlesi:53

Q4Q7K6              	100.00%		B3LBE6              	100.00%
Q4QBJ9              	5.25%		
Bootstrap support for Q4Q7K6 as seed ortholog is 100%.
Bootstrap support for B3LBE6 as seed ortholog is 100%.

Group of orthologs #896. Best score 53 bits
Score difference with first non-orthologous sequence - L.major:53 P.knowlesi:53

E9AEW0              	100.00%		B3L1Y8              	100.00%
Bootstrap support for E9AEW0 as seed ortholog is 100%.
Bootstrap support for B3L1Y8 as seed ortholog is 100%.

Group of orthologs #897. Best score 53 bits
Score difference with first non-orthologous sequence - L.major:53 P.knowlesi:53

Q4Q542              	100.00%		B3L5J1              	100.00%
Bootstrap support for Q4Q542 as seed ortholog is 100%.
Bootstrap support for B3L5J1 as seed ortholog is 100%.

Group of orthologs #898. Best score 53 bits
Score difference with first non-orthologous sequence - L.major:53 P.knowlesi:53

Q4QBW3              	100.00%		B3KZ63              	100.00%
Bootstrap support for Q4QBW3 as seed ortholog is 100%.
Bootstrap support for B3KZ63 as seed ortholog is 100%.

Group of orthologs #899. Best score 53 bits
Score difference with first non-orthologous sequence - L.major:53 P.knowlesi:53

Q4QDK2              	100.00%		B3L591              	100.00%
Bootstrap support for Q4QDK2 as seed ortholog is 100%.
Bootstrap support for B3L591 as seed ortholog is 100%.

Group of orthologs #900. Best score 53 bits
Score difference with first non-orthologous sequence - L.major:53 P.knowlesi:53

Q4QJ82              	100.00%		B3L6F0              	100.00%
Bootstrap support for Q4QJ82 as seed ortholog is 100%.
Bootstrap support for B3L6F0 as seed ortholog is 100%.

Group of orthologs #901. Best score 53 bits
Score difference with first non-orthologous sequence - L.major:53 P.knowlesi:53

Q4QHL4              	100.00%		B3LDF8              	100.00%
Bootstrap support for Q4QHL4 as seed ortholog is 100%.
Bootstrap support for B3LDF8 as seed ortholog is 100%.

Group of orthologs #902. Best score 52 bits
Score difference with first non-orthologous sequence - L.major:52 P.knowlesi:52

E9ACN5              	100.00%		B3L1A2              	100.00%
Bootstrap support for E9ACN5 as seed ortholog is 100%.
Bootstrap support for B3L1A2 as seed ortholog is 100%.

Group of orthologs #903. Best score 52 bits
Score difference with first non-orthologous sequence - L.major:52 P.knowlesi:52

E9ADY0              	100.00%		B3L3U4              	100.00%
Bootstrap support for E9ADY0 as seed ortholog is 100%.
Bootstrap support for B3L3U4 as seed ortholog is 100%.

Group of orthologs #904. Best score 52 bits
Score difference with first non-orthologous sequence - L.major:52 P.knowlesi:52

Q4Q5F4              	100.00%		B3L236              	100.00%
Bootstrap support for Q4Q5F4 as seed ortholog is 100%.
Bootstrap support for B3L236 as seed ortholog is 100%.

Group of orthologs #905. Best score 52 bits
Score difference with first non-orthologous sequence - L.major:52 P.knowlesi:52

Q4Q9G2              	100.00%		B3KZI5              	100.00%
Bootstrap support for Q4Q9G2 as seed ortholog is 100%.
Bootstrap support for B3KZI5 as seed ortholog is 100%.

Group of orthologs #906. Best score 52 bits
Score difference with first non-orthologous sequence - L.major:52 P.knowlesi:52

Q4QAW4              	100.00%		B3L6A4              	100.00%
Bootstrap support for Q4QAW4 as seed ortholog is 100%.
Bootstrap support for B3L6A4 as seed ortholog is 100%.

Group of orthologs #907. Best score 52 bits
Score difference with first non-orthologous sequence - L.major:52 P.knowlesi:2

Q4QH76              	100.00%		B3LBF4              	100.00%
Bootstrap support for Q4QH76 as seed ortholog is 100%.
Bootstrap support for B3LBF4 as seed ortholog is 51%.
Alternative seed ortholog is B3LAN0 (2 bits away from this cluster)

Group of orthologs #908. Best score 50 bits
Score difference with first non-orthologous sequence - L.major:50 P.knowlesi:50

E9AFN5              	100.00%		B3L766              	100.00%
Bootstrap support for E9AFN5 as seed ortholog is 100%.
Bootstrap support for B3L766 as seed ortholog is 100%.

Group of orthologs #909. Best score 50 bits
Score difference with first non-orthologous sequence - L.major:50 P.knowlesi:50

Q4Q2R1              	100.00%		B3L5I9              	100.00%
Bootstrap support for Q4Q2R1 as seed ortholog is 100%.
Bootstrap support for B3L5I9 as seed ortholog is 100%.

Group of orthologs #910. Best score 49 bits
Score difference with first non-orthologous sequence - L.major:49 P.knowlesi:49

Q4Q5H5              	100.00%		B3L168              	100.00%
Bootstrap support for Q4Q5H5 as seed ortholog is 100%.
Bootstrap support for B3L168 as seed ortholog is 100%.

Group of orthologs #911. Best score 49 bits
Score difference with first non-orthologous sequence - L.major:49 P.knowlesi:49

Q4QFP5              	100.00%		B3L5F9              	100.00%
Bootstrap support for Q4QFP5 as seed ortholog is 100%.
Bootstrap support for B3L5F9 as seed ortholog is 100%.

Group of orthologs #912. Best score 49 bits
Score difference with first non-orthologous sequence - L.major:49 P.knowlesi:49

Q4QGU2              	100.00%		B3L8T1              	100.00%
Bootstrap support for Q4QGU2 as seed ortholog is 100%.
Bootstrap support for B3L8T1 as seed ortholog is 100%.

Group of orthologs #913. Best score 49 bits
Score difference with first non-orthologous sequence - L.major:49 P.knowlesi:49

Q9N857              	100.00%		B3LBN2              	100.00%
Bootstrap support for Q9N857 as seed ortholog is 100%.
Bootstrap support for B3LBN2 as seed ortholog is 100%.

Group of orthologs #914. Best score 48 bits
Score difference with first non-orthologous sequence - L.major:48 P.knowlesi:48

E9AFZ9              	100.00%		B3LC45              	100.00%
Bootstrap support for E9AFZ9 as seed ortholog is 100%.
Bootstrap support for B3LC45 as seed ortholog is 100%.

Group of orthologs #915. Best score 48 bits
Score difference with first non-orthologous sequence - L.major:48 P.knowlesi:8

Q4QFW1              	100.00%		B3L1D1              	100.00%
Bootstrap support for Q4QFW1 as seed ortholog is 100%.
Bootstrap support for B3L1D1 as seed ortholog is 63%.
Alternative seed ortholog is B3LBC5 (8 bits away from this cluster)

Group of orthologs #916. Best score 48 bits
Score difference with first non-orthologous sequence - L.major:48 P.knowlesi:48

Q4QAL3              	100.00%		B3L9G7              	100.00%
Bootstrap support for Q4QAL3 as seed ortholog is 100%.
Bootstrap support for B3L9G7 as seed ortholog is 100%.

Group of orthologs #917. Best score 47 bits
Score difference with first non-orthologous sequence - L.major:47 P.knowlesi:47

Q9GRP9              	100.00%		B3L0T1              	100.00%
                    	       		B3L636              	5.53%
Bootstrap support for Q9GRP9 as seed ortholog is 100%.
Bootstrap support for B3L0T1 as seed ortholog is 100%.

Group of orthologs #918. Best score 47 bits
Score difference with first non-orthologous sequence - L.major:47 P.knowlesi:47

E9ACL9              	100.00%		B3L218              	100.00%
Bootstrap support for E9ACL9 as seed ortholog is 100%.
Bootstrap support for B3L218 as seed ortholog is 100%.

Group of orthologs #919. Best score 47 bits
Score difference with first non-orthologous sequence - L.major:47 P.knowlesi:47

Q4QAD9              	100.00%		B3L0D3              	100.00%
Bootstrap support for Q4QAD9 as seed ortholog is 100%.
Bootstrap support for B3L0D3 as seed ortholog is 100%.

Group of orthologs #920. Best score 47 bits
Score difference with first non-orthologous sequence - L.major:47 P.knowlesi:47

Q4Q877              	100.00%		B3L910              	100.00%
Bootstrap support for Q4Q877 as seed ortholog is 100%.
Bootstrap support for B3L910 as seed ortholog is 100%.

Group of orthologs #921. Best score 47 bits
Score difference with first non-orthologous sequence - L.major:47 P.knowlesi:47

Q4QCV4              	100.00%		B3LB15              	100.00%
Bootstrap support for Q4QCV4 as seed ortholog is 100%.
Bootstrap support for B3LB15 as seed ortholog is 100%.

Group of orthologs #922. Best score 46 bits
Score difference with first non-orthologous sequence - L.major:46 P.knowlesi:46

Q4QBT0              	100.00%		B3L590              	100.00%
Bootstrap support for Q4QBT0 as seed ortholog is 100%.
Bootstrap support for B3L590 as seed ortholog is 100%.

Group of orthologs #923. Best score 46 bits
Score difference with first non-orthologous sequence - L.major:46 P.knowlesi:46

Q4QEW7              	100.00%		B3L830              	100.00%
Bootstrap support for Q4QEW7 as seed ortholog is 100%.
Bootstrap support for B3L830 as seed ortholog is 100%.

Group of orthologs #924. Best score 44 bits
Score difference with first non-orthologous sequence - L.major:44 P.knowlesi:44

Q4QFI1              	100.00%		B3L915              	100.00%
Q4QHK3              	17.64%		
Bootstrap support for Q4QFI1 as seed ortholog is 100%.
Bootstrap support for B3L915 as seed ortholog is 100%.

Group of orthologs #925. Best score 44 bits
Score difference with first non-orthologous sequence - L.major:44 P.knowlesi:44

E9AEW3              	100.00%		B3L091              	100.00%
Bootstrap support for E9AEW3 as seed ortholog is 100%.
Bootstrap support for B3L091 as seed ortholog is 100%.

Group of orthologs #926. Best score 44 bits
Score difference with first non-orthologous sequence - L.major:44 P.knowlesi:44

Q4Q7J7              	100.00%		B3L4X9              	100.00%
Bootstrap support for Q4Q7J7 as seed ortholog is 100%.
Bootstrap support for B3L4X9 as seed ortholog is 100%.

Group of orthologs #927. Best score 43 bits
Score difference with first non-orthologous sequence - L.major:43 P.knowlesi:43

Q4Q2H6              	100.00%		B3L0K9              	100.00%
Bootstrap support for Q4Q2H6 as seed ortholog is 100%.
Bootstrap support for B3L0K9 as seed ortholog is 100%.

Group of orthologs #928. Best score 43 bits
Score difference with first non-orthologous sequence - L.major:43 P.knowlesi:43

Q4Q7C6              	100.00%		B3L583              	100.00%
Bootstrap support for Q4Q7C6 as seed ortholog is 100%.
Bootstrap support for B3L583 as seed ortholog is 100%.

Group of orthologs #929. Best score 43 bits
Score difference with first non-orthologous sequence - L.major:43 P.knowlesi:43

Q4QJ44              	100.00%		B3L3T0              	100.00%
Bootstrap support for Q4QJ44 as seed ortholog is 100%.
Bootstrap support for B3L3T0 as seed ortholog is 100%.

Group of orthologs #930. Best score 42 bits
Score difference with first non-orthologous sequence - L.major:42 P.knowlesi:42

Q4Q9J1              	100.00%		B3LB79              	100.00%
Bootstrap support for Q4Q9J1 as seed ortholog is 100%.
Bootstrap support for B3LB79 as seed ortholog is 100%.

Group of orthologs #931. Best score 41 bits
Score difference with first non-orthologous sequence - L.major:41 P.knowlesi:41

E9AF76              	100.00%		B3L9T0              	100.00%
Bootstrap support for E9AF76 as seed ortholog is 100%.
Bootstrap support for B3L9T0 as seed ortholog is 100%.

Group of orthologs #932. Best score 41 bits
Score difference with first non-orthologous sequence - L.major:41 P.knowlesi:41

Q4QEW1              	100.00%		B3L928              	100.00%
Bootstrap support for Q4QEW1 as seed ortholog is 100%.
Bootstrap support for B3L928 as seed ortholog is 100%.

Group of orthologs #933. Best score 40 bits
Score difference with first non-orthologous sequence - L.major:40 P.knowlesi:40

Q4Q9S6              	100.00%		B3L982              	100.00%
Bootstrap support for Q4Q9S6 as seed ortholog is 100%.
Bootstrap support for B3L982 as seed ortholog is 100%.