###################################
229 groups of orthologs
311 in-paralogs from L.major
247 in-paralogs from M.jannaschii
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 669 bits
Score difference with first non-orthologous sequence - L.major:145 M.jannaschii:669

Q4Q1T9              	100.00%		Q58556              	100.00%
Bootstrap support for Q4Q1T9 as seed ortholog is 99%.
Bootstrap support for Q58556 as seed ortholog is 100%.

Group of orthologs #2. Best score 582 bits
Score difference with first non-orthologous sequence - L.major:474 M.jannaschii:582

Q4Q2H7              	100.00%		Q57670              	100.00%
Bootstrap support for Q4Q2H7 as seed ortholog is 100%.
Bootstrap support for Q57670 as seed ortholog is 100%.

Group of orthologs #3. Best score 548 bits
Score difference with first non-orthologous sequence - L.major:548 M.jannaschii:548

Q4Q600              	100.00%		Q58445              	100.00%
Bootstrap support for Q4Q600 as seed ortholog is 100%.
Bootstrap support for Q58445 as seed ortholog is 100%.

Group of orthologs #4. Best score 543 bits
Score difference with first non-orthologous sequence - L.major:457 M.jannaschii:543

Q4QCE4              	100.00%		Q58129              	100.00%
Bootstrap support for Q4QCE4 as seed ortholog is 100%.
Bootstrap support for Q58129 as seed ortholog is 100%.

Group of orthologs #5. Best score 534 bits
Score difference with first non-orthologous sequence - L.major:413 M.jannaschii:534

Q4Q821              	100.00%		Q57669              	100.00%
Bootstrap support for Q4Q821 as seed ortholog is 100%.
Bootstrap support for Q57669 as seed ortholog is 100%.

Group of orthologs #6. Best score 524 bits
Score difference with first non-orthologous sequence - L.major:524 M.jannaschii:524

Q4Q0J9              	100.00%		Q58357              	100.00%
Bootstrap support for Q4Q0J9 as seed ortholog is 100%.
Bootstrap support for Q58357 as seed ortholog is 100%.

Group of orthologs #7. Best score 505 bits
Score difference with first non-orthologous sequence - L.major:230 M.jannaschii:505

Q4QDN7              	100.00%		Q58623              	100.00%
Q4QDN8              	100.00%		
Bootstrap support for Q4QDN7 as seed ortholog is 99%.
Bootstrap support for Q4QDN8 as seed ortholog is 99%.
Bootstrap support for Q58623 as seed ortholog is 100%.

Group of orthologs #8. Best score 500 bits
Score difference with first non-orthologous sequence - L.major:500 M.jannaschii:500

Q4Q6P8              	100.00%		Q60181              	100.00%
Bootstrap support for Q4Q6P8 as seed ortholog is 100%.
Bootstrap support for Q60181 as seed ortholog is 100%.

Group of orthologs #9. Best score 491 bits
Score difference with first non-orthologous sequence - L.major:196 M.jannaschii:491

Q4QEI9              	100.00%		Q57770              	100.00%
Q4QEI8              	99.28%		
Bootstrap support for Q4QEI9 as seed ortholog is 99%.
Bootstrap support for Q57770 as seed ortholog is 100%.

Group of orthologs #10. Best score 457 bits
Score difference with first non-orthologous sequence - L.major:31 M.jannaschii:457

E9ABZ4              	100.00%		Q58626              	100.00%
Bootstrap support for E9ABZ4 as seed ortholog is 78%.
Bootstrap support for Q58626 as seed ortholog is 100%.

Group of orthologs #11. Best score 452 bits
Score difference with first non-orthologous sequence - L.major:150 M.jannaschii:452

Q4Q259              	100.00%		Q58448              	100.00%
Bootstrap support for Q4Q259 as seed ortholog is 100%.
Bootstrap support for Q58448 as seed ortholog is 100%.

Group of orthologs #12. Best score 442 bits
Score difference with first non-orthologous sequence - L.major:442 M.jannaschii:442

Q4QFL8              	100.00%		Q60173              	100.00%
Bootstrap support for Q4QFL8 as seed ortholog is 100%.
Bootstrap support for Q60173 as seed ortholog is 100%.

Group of orthologs #13. Best score 438 bits
Score difference with first non-orthologous sequence - L.major:438 M.jannaschii:438

Q4QCY4              	100.00%		Q58574              	100.00%
Bootstrap support for Q4QCY4 as seed ortholog is 100%.
Bootstrap support for Q58574 as seed ortholog is 100%.

Group of orthologs #14. Best score 417 bits
Score difference with first non-orthologous sequence - L.major:417 M.jannaschii:417

Q4QG44              	100.00%		Q58050              	100.00%
Bootstrap support for Q4QG44 as seed ortholog is 100%.
Bootstrap support for Q58050 as seed ortholog is 100%.

Group of orthologs #15. Best score 382 bits
Score difference with first non-orthologous sequence - L.major:382 M.jannaschii:382

Q4Q131              	100.00%		Q57681              	100.00%
Bootstrap support for Q4Q131 as seed ortholog is 100%.
Bootstrap support for Q57681 as seed ortholog is 100%.

Group of orthologs #16. Best score 372 bits
Score difference with first non-orthologous sequence - L.major:1 M.jannaschii:372

Q4Q5I2              	100.00%		Q58405              	100.00%
Bootstrap support for Q4Q5I2 as seed ortholog is 51%.
Alternative seed ortholog is Q4QB32 (1 bits away from this cluster)
Bootstrap support for Q58405 as seed ortholog is 100%.

Group of orthologs #17. Best score 361 bits
Score difference with first non-orthologous sequence - L.major:88 M.jannaschii:361

Q4QEB3              	100.00%		Q59011              	100.00%
Bootstrap support for Q4QEB3 as seed ortholog is 98%.
Bootstrap support for Q59011 as seed ortholog is 100%.

Group of orthologs #18. Best score 360 bits
Score difference with first non-orthologous sequence - L.major:360 M.jannaschii:360

Q4Q1J6              	100.00%		Q58722              	100.00%
E9AG04              	5.00%		
Bootstrap support for Q4Q1J6 as seed ortholog is 100%.
Bootstrap support for Q58722 as seed ortholog is 100%.

Group of orthologs #19. Best score 351 bits
Score difference with first non-orthologous sequence - L.major:4 M.jannaschii:194

Q4Q0X8              	100.00%		Q58576              	100.00%
Bootstrap support for Q4Q0X8 as seed ortholog is 56%.
Alternative seed ortholog is Q4QBT5 (4 bits away from this cluster)
Bootstrap support for Q58576 as seed ortholog is 100%.

Group of orthologs #20. Best score 342 bits
Score difference with first non-orthologous sequence - L.major:229 M.jannaschii:342

Q4QHR7              	100.00%		Q58657              	100.00%
Q4QHR6              	39.80%		
Bootstrap support for Q4QHR7 as seed ortholog is 100%.
Bootstrap support for Q58657 as seed ortholog is 100%.

Group of orthologs #21. Best score 334 bits
Score difference with first non-orthologous sequence - L.major:334 M.jannaschii:334

Q4Q3R1              	100.00%		Q57710              	100.00%
Bootstrap support for Q4Q3R1 as seed ortholog is 100%.
Bootstrap support for Q57710 as seed ortholog is 100%.

Group of orthologs #22. Best score 329 bits
Score difference with first non-orthologous sequence - L.major:329 M.jannaschii:329

Q4QBE8              	100.00%		Q60174              	100.00%
Bootstrap support for Q4QBE8 as seed ortholog is 100%.
Bootstrap support for Q60174 as seed ortholog is 100%.

Group of orthologs #23. Best score 315 bits
Score difference with first non-orthologous sequence - L.major:315 M.jannaschii:315

Q4QIY2              	100.00%		Q58815              	100.00%
Bootstrap support for Q4QIY2 as seed ortholog is 100%.
Bootstrap support for Q58815 as seed ortholog is 100%.

Group of orthologs #24. Best score 307 bits
Score difference with first non-orthologous sequence - L.major:307 M.jannaschii:307

Q4Q124              	100.00%		Q58783              	100.00%
Bootstrap support for Q4Q124 as seed ortholog is 100%.
Bootstrap support for Q58783 as seed ortholog is 100%.

Group of orthologs #25. Best score 302 bits
Score difference with first non-orthologous sequence - L.major:302 M.jannaschii:302

Q4QAR0              	100.00%		Q57565              	100.00%
Bootstrap support for Q4QAR0 as seed ortholog is 100%.
Bootstrap support for Q57565 as seed ortholog is 100%.

Group of orthologs #26. Best score 299 bits
Score difference with first non-orthologous sequence - L.major:299 M.jannaschii:299

Q4Q6X7              	100.00%		Q58413              	100.00%
Bootstrap support for Q4Q6X7 as seed ortholog is 100%.
Bootstrap support for Q58413 as seed ortholog is 100%.

Group of orthologs #27. Best score 291 bits
Score difference with first non-orthologous sequence - L.major:179 M.jannaschii:291

Q4QAG8              	100.00%		Q60356              	100.00%
Bootstrap support for Q4QAG8 as seed ortholog is 99%.
Bootstrap support for Q60356 as seed ortholog is 100%.

Group of orthologs #28. Best score 289 bits
Score difference with first non-orthologous sequence - L.major:289 M.jannaschii:289

Q4QEZ6              	100.00%		Q58536              	100.00%
Q4QB17              	8.49%		
Bootstrap support for Q4QEZ6 as seed ortholog is 100%.
Bootstrap support for Q58536 as seed ortholog is 100%.

Group of orthologs #29. Best score 288 bits
Score difference with first non-orthologous sequence - L.major:7 M.jannaschii:177

E9AFH5              	100.00%		Q59037              	100.00%
Bootstrap support for E9AFH5 as seed ortholog is 50%.
Alternative seed ortholog is Q4QIG8 (7 bits away from this cluster)
Bootstrap support for Q59037 as seed ortholog is 99%.

Group of orthologs #30. Best score 287 bits
Score difference with first non-orthologous sequence - L.major:287 M.jannaschii:287

Q4Q6Q4              	100.00%		Q58530              	100.00%
Bootstrap support for Q4Q6Q4 as seed ortholog is 100%.
Bootstrap support for Q58530 as seed ortholog is 100%.

Group of orthologs #31. Best score 282 bits
Score difference with first non-orthologous sequence - L.major:282 M.jannaschii:282

Q9Y0F3              	100.00%		Q58116              	100.00%
Bootstrap support for Q9Y0F3 as seed ortholog is 100%.
Bootstrap support for Q58116 as seed ortholog is 100%.

Group of orthologs #32. Best score 270 bits
Score difference with first non-orthologous sequence - L.major:270 M.jannaschii:270

Q4Q9M4              	100.00%		Q58643              	100.00%
Bootstrap support for Q4Q9M4 as seed ortholog is 100%.
Bootstrap support for Q58643 as seed ortholog is 100%.

Group of orthologs #33. Best score 268 bits
Score difference with first non-orthologous sequence - L.major:268 M.jannaschii:268

Q4QC07              	100.00%		Q57612              	100.00%
Bootstrap support for Q4QC07 as seed ortholog is 100%.
Bootstrap support for Q57612 as seed ortholog is 100%.

Group of orthologs #34. Best score 255 bits
Score difference with first non-orthologous sequence - L.major:90 M.jannaschii:255

Q4Q1P8              	100.00%		Q58806              	100.00%
Bootstrap support for Q4Q1P8 as seed ortholog is 98%.
Bootstrap support for Q58806 as seed ortholog is 100%.

Group of orthologs #35. Best score 251 bits
Score difference with first non-orthologous sequence - L.major:251 M.jannaschii:177

O61128              	100.00%		Q49593              	100.00%
O61127              	18.08%		
Bootstrap support for O61128 as seed ortholog is 100%.
Bootstrap support for Q49593 as seed ortholog is 100%.

Group of orthologs #36. Best score 247 bits
Score difference with first non-orthologous sequence - L.major:143 M.jannaschii:247

Q4QCA9              	100.00%		Q58950              	100.00%
Q4Q7R2              	11.16%		
Bootstrap support for Q4QCA9 as seed ortholog is 99%.
Bootstrap support for Q58950 as seed ortholog is 100%.

Group of orthologs #37. Best score 247 bits
Score difference with first non-orthologous sequence - L.major:247 M.jannaschii:247

Q4QDS0              	100.00%		Q58635              	100.00%
Q4QDS1              	100.00%		
Bootstrap support for Q4QDS0 as seed ortholog is 100%.
Bootstrap support for Q4QDS1 as seed ortholog is 100%.
Bootstrap support for Q58635 as seed ortholog is 100%.

Group of orthologs #38. Best score 238 bits
Score difference with first non-orthologous sequence - L.major:16 M.jannaschii:175

O62591              	100.00%		Q58083              	100.00%
Q4Q8B2              	27.36%		
E9AEL4              	10.33%		
Bootstrap support for O62591 as seed ortholog is 33%.
Alternative seed ortholog is Q4QIQ9 (16 bits away from this cluster)
Bootstrap support for Q58083 as seed ortholog is 100%.

Group of orthologs #39. Best score 234 bits
Score difference with first non-orthologous sequence - L.major:234 M.jannaschii:234

Q4Q418              	100.00%		Q58295              	100.00%
Bootstrap support for Q4Q418 as seed ortholog is 100%.
Bootstrap support for Q58295 as seed ortholog is 100%.

Group of orthologs #40. Best score 233 bits
Score difference with first non-orthologous sequence - L.major:233 M.jannaschii:233

Q4QGX4              	100.00%		Q60175              	100.00%
Bootstrap support for Q4QGX4 as seed ortholog is 100%.
Bootstrap support for Q60175 as seed ortholog is 100%.

Group of orthologs #41. Best score 228 bits
Score difference with first non-orthologous sequence - L.major:228 M.jannaschii:228

Q4QD34              	100.00%		Q58058              	100.00%
Q4QD33              	82.61%		
Q4Q6V1              	16.69%		
Bootstrap support for Q4QD34 as seed ortholog is 100%.
Bootstrap support for Q58058 as seed ortholog is 100%.

Group of orthologs #42. Best score 224 bits
Score difference with first non-orthologous sequence - L.major:4 M.jannaschii:168

Q4QCE9              	100.00%		Q57731              	100.00%
Bootstrap support for Q4QCE9 as seed ortholog is 45%.
Alternative seed ortholog is Q4Q9E8 (4 bits away from this cluster)
Bootstrap support for Q57731 as seed ortholog is 100%.

Group of orthologs #43. Best score 223 bits
Score difference with first non-orthologous sequence - L.major:223 M.jannaschii:223

Q4Q5J5              	100.00%		Q57911              	100.00%
Bootstrap support for Q4Q5J5 as seed ortholog is 100%.
Bootstrap support for Q57911 as seed ortholog is 100%.

Group of orthologs #44. Best score 222 bits
Score difference with first non-orthologous sequence - L.major:222 M.jannaschii:222

Q4FWX5              	100.00%		P54017              	100.00%
Bootstrap support for Q4FWX5 as seed ortholog is 100%.
Bootstrap support for P54017 as seed ortholog is 100%.

Group of orthologs #45. Best score 217 bits
Score difference with first non-orthologous sequence - L.major:217 M.jannaschii:217

E9AEI0              	100.00%		Q57572              	100.00%
E9AEH9              	81.61%		
Bootstrap support for E9AEI0 as seed ortholog is 100%.
Bootstrap support for Q57572 as seed ortholog is 100%.

Group of orthologs #46. Best score 214 bits
Score difference with first non-orthologous sequence - L.major:214 M.jannaschii:130

Q4QEW6              	100.00%		Q58976              	100.00%
Bootstrap support for Q4QEW6 as seed ortholog is 100%.
Bootstrap support for Q58976 as seed ortholog is 99%.

Group of orthologs #47. Best score 213 bits
Score difference with first non-orthologous sequence - L.major:213 M.jannaschii:213

Q4QI01              	100.00%		Q58884              	100.00%
Q9U1E0              	5.85%		Q58371              	24.31%
                    	       		Q57809              	19.45%
                    	       		Q60275              	8.40%
Bootstrap support for Q4QI01 as seed ortholog is 100%.
Bootstrap support for Q58884 as seed ortholog is 100%.

Group of orthologs #48. Best score 210 bits
Score difference with first non-orthologous sequence - L.major:210 M.jannaschii:210

E9ACF1              	100.00%		Q58424              	100.00%
Bootstrap support for E9ACF1 as seed ortholog is 100%.
Bootstrap support for Q58424 as seed ortholog is 100%.

Group of orthologs #49. Best score 209 bits
Score difference with first non-orthologous sequence - L.major:209 M.jannaschii:91

Q4Q0R9              	100.00%		Q57896              	100.00%
Bootstrap support for Q4Q0R9 as seed ortholog is 100%.
Bootstrap support for Q57896 as seed ortholog is 98%.

Group of orthologs #50. Best score 208 bits
Score difference with first non-orthologous sequence - L.major:208 M.jannaschii:208

Q4Q6W5              	100.00%		Q58772              	100.00%
Bootstrap support for Q4Q6W5 as seed ortholog is 100%.
Bootstrap support for Q58772 as seed ortholog is 100%.

Group of orthologs #51. Best score 205 bits
Score difference with first non-orthologous sequence - L.major:205 M.jannaschii:205

Q4QDT8              	100.00%		Q58374              	100.00%
Bootstrap support for Q4QDT8 as seed ortholog is 100%.
Bootstrap support for Q58374 as seed ortholog is 100%.

Group of orthologs #52. Best score 204 bits
Score difference with first non-orthologous sequence - L.major:204 M.jannaschii:204

Q4Q161              	100.00%		Q57739              	100.00%
Bootstrap support for Q4Q161 as seed ortholog is 100%.
Bootstrap support for Q57739 as seed ortholog is 100%.

Group of orthologs #53. Best score 203 bits
Score difference with first non-orthologous sequence - L.major:203 M.jannaschii:203

Q4Q1C4              	100.00%		Q57663              	100.00%
Bootstrap support for Q4Q1C4 as seed ortholog is 100%.
Bootstrap support for Q57663 as seed ortholog is 100%.

Group of orthologs #54. Best score 203 bits
Score difference with first non-orthologous sequence - L.major:203 M.jannaschii:203

Q4QD19              	100.00%		Q58224              	100.00%
Bootstrap support for Q4QD19 as seed ortholog is 100%.
Bootstrap support for Q58224 as seed ortholog is 100%.

Group of orthologs #55. Best score 202 bits
Score difference with first non-orthologous sequence - L.major:202 M.jannaschii:202

Q4Q2Q6              	100.00%		P54014              	100.00%
Bootstrap support for Q4Q2Q6 as seed ortholog is 100%.
Bootstrap support for P54014 as seed ortholog is 100%.

Group of orthologs #56. Best score 201 bits
Score difference with first non-orthologous sequence - L.major:201 M.jannaschii:201

Q4FYU7              	100.00%		Q58839              	100.00%
Bootstrap support for Q4FYU7 as seed ortholog is 100%.
Bootstrap support for Q58839 as seed ortholog is 100%.

Group of orthologs #57. Best score 201 bits
Score difference with first non-orthologous sequence - L.major:11 M.jannaschii:201

Q4QC00              	100.00%		Q60177              	100.00%
Bootstrap support for Q4QC00 as seed ortholog is 78%.
Bootstrap support for Q60177 as seed ortholog is 100%.

Group of orthologs #58. Best score 200 bits
Score difference with first non-orthologous sequence - L.major:200 M.jannaschii:89

Q4QH76              	100.00%		Q58903              	100.00%
                    	       		Q58206              	14.64%
Bootstrap support for Q4QH76 as seed ortholog is 100%.
Bootstrap support for Q58903 as seed ortholog is 99%.

Group of orthologs #59. Best score 197 bits
Score difference with first non-orthologous sequence - L.major:197 M.jannaschii:197

Q4Q2K1              	100.00%		Q57626              	100.00%
                    	       		Q58633              	15.51%
                    	       		Q60355              	6.14%
Bootstrap support for Q4Q2K1 as seed ortholog is 100%.
Bootstrap support for Q57626 as seed ortholog is 100%.

Group of orthologs #60. Best score 191 bits
Score difference with first non-orthologous sequence - L.major:191 M.jannaschii:191

Q4Q828              	100.00%		Q58992              	100.00%
Q4QFK2              	45.97%		
Bootstrap support for Q4Q828 as seed ortholog is 100%.
Bootstrap support for Q58992 as seed ortholog is 100%.

Group of orthologs #61. Best score 190 bits
Score difference with first non-orthologous sequence - L.major:190 M.jannaschii:190

Q5QQ43              	100.00%		Q58272              	100.00%
Bootstrap support for Q5QQ43 as seed ortholog is 100%.
Bootstrap support for Q58272 as seed ortholog is 100%.

Group of orthologs #62. Best score 187 bits
Score difference with first non-orthologous sequence - L.major:66 M.jannaschii:80

Q4Q199              	100.00%		Q59046              	100.00%
Q4Q888              	11.02%		
Bootstrap support for Q4Q199 as seed ortholog is 84%.
Bootstrap support for Q59046 as seed ortholog is 92%.

Group of orthologs #63. Best score 187 bits
Score difference with first non-orthologous sequence - L.major:187 M.jannaschii:187

Q4QDB1              	100.00%		Q58508              	100.00%
Bootstrap support for Q4QDB1 as seed ortholog is 100%.
Bootstrap support for Q58508 as seed ortholog is 100%.

Group of orthologs #64. Best score 184 bits
Score difference with first non-orthologous sequence - L.major:184 M.jannaschii:184

Q4Q6S3              	100.00%		P54060              	100.00%
E9AF12              	96.71%		
Bootstrap support for Q4Q6S3 as seed ortholog is 100%.
Bootstrap support for P54060 as seed ortholog is 100%.

Group of orthologs #65. Best score 183 bits
Score difference with first non-orthologous sequence - L.major:81 M.jannaschii:183

Q4Q2R0              	100.00%		Q57918              	100.00%
Bootstrap support for Q4Q2R0 as seed ortholog is 96%.
Bootstrap support for Q57918 as seed ortholog is 100%.

Group of orthologs #66. Best score 175 bits
Score difference with first non-orthologous sequence - L.major:175 M.jannaschii:175

Q4QHJ7              	100.00%		Q58105              	100.00%
Q4QF42              	9.84%		
Bootstrap support for Q4QHJ7 as seed ortholog is 100%.
Bootstrap support for Q58105 as seed ortholog is 100%.

Group of orthologs #67. Best score 174 bits
Score difference with first non-orthologous sequence - L.major:174 M.jannaschii:174

Q4Q6A1              	100.00%		Q58670              	100.00%
Bootstrap support for Q4Q6A1 as seed ortholog is 100%.
Bootstrap support for Q58670 as seed ortholog is 100%.

Group of orthologs #68. Best score 173 bits
Score difference with first non-orthologous sequence - L.major:173 M.jannaschii:173

Q4QGX9              	100.00%		Q57962              	100.00%
Bootstrap support for Q4QGX9 as seed ortholog is 100%.
Bootstrap support for Q57962 as seed ortholog is 100%.

Group of orthologs #69. Best score 172 bits
Score difference with first non-orthologous sequence - L.major:172 M.jannaschii:172

Q4Q6U5              	100.00%		Q57635              	100.00%
Bootstrap support for Q4Q6U5 as seed ortholog is 100%.
Bootstrap support for Q57635 as seed ortholog is 100%.

Group of orthologs #70. Best score 171 bits
Score difference with first non-orthologous sequence - L.major:171 M.jannaschii:171

Q4Q1B2              	100.00%		Q58108              	100.00%
Q4QDL1              	100.00%		
Bootstrap support for Q4Q1B2 as seed ortholog is 100%.
Bootstrap support for Q4QDL1 as seed ortholog is 100%.
Bootstrap support for Q58108 as seed ortholog is 100%.

Group of orthologs #71. Best score 168 bits
Score difference with first non-orthologous sequence - L.major:168 M.jannaschii:168

Q4QGA4              	100.00%		Q58524              	100.00%
Q4QE98              	11.26%		
Bootstrap support for Q4QGA4 as seed ortholog is 100%.
Bootstrap support for Q58524 as seed ortholog is 100%.

Group of orthologs #72. Best score 168 bits
Score difference with first non-orthologous sequence - L.major:168 M.jannaschii:168

Q4Q0M0              	100.00%		P60819              	100.00%
Bootstrap support for Q4Q0M0 as seed ortholog is 100%.
Bootstrap support for P60819 as seed ortholog is 100%.

Group of orthologs #73. Best score 168 bits
Score difference with first non-orthologous sequence - L.major:168 M.jannaschii:168

Q4QF25              	100.00%		Q57705              	100.00%
Bootstrap support for Q4QF25 as seed ortholog is 100%.
Bootstrap support for Q57705 as seed ortholog is 100%.

Group of orthologs #74. Best score 168 bits
Score difference with first non-orthologous sequence - L.major:168 M.jannaschii:168

Q95Z84              	100.00%		Q57761              	100.00%
Bootstrap support for Q95Z84 as seed ortholog is 100%.
Bootstrap support for Q57761 as seed ortholog is 100%.

Group of orthologs #75. Best score 166 bits
Score difference with first non-orthologous sequence - L.major:166 M.jannaschii:166

Q868B1              	100.00%		P54063              	100.00%
Bootstrap support for Q868B1 as seed ortholog is 100%.
Bootstrap support for P54063 as seed ortholog is 100%.

Group of orthologs #76. Best score 165 bits
Score difference with first non-orthologous sequence - L.major:165 M.jannaschii:165

Q4Q3T2              	100.00%		Q58130              	100.00%
                    	       		Q58991              	100.00%
Bootstrap support for Q4Q3T2 as seed ortholog is 100%.
Bootstrap support for Q58130 as seed ortholog is 100%.
Bootstrap support for Q58991 as seed ortholog is 100%.

Group of orthologs #77. Best score 165 bits
Score difference with first non-orthologous sequence - L.major:165 M.jannaschii:165

Q4Q7P3              	100.00%		Q58406              	100.00%
Bootstrap support for Q4Q7P3 as seed ortholog is 100%.
Bootstrap support for Q58406 as seed ortholog is 100%.

Group of orthologs #78. Best score 165 bits
Score difference with first non-orthologous sequence - L.major:165 M.jannaschii:165

Q4QCD2              	100.00%		Q58659              	100.00%
Bootstrap support for Q4QCD2 as seed ortholog is 100%.
Bootstrap support for Q58659 as seed ortholog is 100%.

Group of orthologs #79. Best score 165 bits
Score difference with first non-orthologous sequence - L.major:165 M.jannaschii:165

Q4QHT0              	100.00%		Q59020              	100.00%
Bootstrap support for Q4QHT0 as seed ortholog is 100%.
Bootstrap support for Q59020 as seed ortholog is 100%.

Group of orthologs #80. Best score 165 bits
Score difference with first non-orthologous sequence - L.major:31 M.jannaschii:165

Q6XFB3              	100.00%		Q58694              	100.00%
Bootstrap support for Q6XFB3 as seed ortholog is 79%.
Bootstrap support for Q58694 as seed ortholog is 100%.

Group of orthologs #81. Best score 162 bits
Score difference with first non-orthologous sequence - L.major:78 M.jannaschii:162

Q9U0V9              	100.00%		Q58944              	100.00%
Bootstrap support for Q9U0V9 as seed ortholog is 97%.
Bootstrap support for Q58944 as seed ortholog is 100%.

Group of orthologs #82. Best score 159 bits
Score difference with first non-orthologous sequence - L.major:159 M.jannaschii:159

Q4QBJ3              	100.00%		Q57984              	100.00%
Bootstrap support for Q4QBJ3 as seed ortholog is 100%.
Bootstrap support for Q57984 as seed ortholog is 100%.

Group of orthologs #83. Best score 158 bits
Score difference with first non-orthologous sequence - L.major:158 M.jannaschii:158

Q4Q5P0              	100.00%		P54045              	100.00%
Q4QDL5              	100.00%		
Bootstrap support for Q4Q5P0 as seed ortholog is 100%.
Bootstrap support for Q4QDL5 as seed ortholog is 100%.
Bootstrap support for P54045 as seed ortholog is 100%.

Group of orthologs #84. Best score 155 bits
Score difference with first non-orthologous sequence - L.major:155 M.jannaschii:155

Q4QH08              	100.00%		Q58542              	100.00%
Bootstrap support for Q4QH08 as seed ortholog is 100%.
Bootstrap support for Q58542 as seed ortholog is 100%.

Group of orthologs #85. Best score 154 bits
Score difference with first non-orthologous sequence - L.major:154 M.jannaschii:154

E9ADB2              	100.00%		Q57689              	100.00%
Bootstrap support for E9ADB2 as seed ortholog is 100%.
Bootstrap support for Q57689 as seed ortholog is 100%.

Group of orthologs #86. Best score 148 bits
Score difference with first non-orthologous sequence - L.major:38 M.jannaschii:148

Q4Q3U7              	100.00%		Q58859              	100.00%
Bootstrap support for Q4Q3U7 as seed ortholog is 87%.
Bootstrap support for Q58859 as seed ortholog is 100%.

Group of orthologs #87. Best score 148 bits
Score difference with first non-orthologous sequence - L.major:54 M.jannaschii:148

Q4QCC5              	100.00%		Q58725              	100.00%
Bootstrap support for Q4QCC5 as seed ortholog is 93%.
Bootstrap support for Q58725 as seed ortholog is 100%.

Group of orthologs #88. Best score 147 bits
Score difference with first non-orthologous sequence - L.major:147 M.jannaschii:147

Q4Q0Q0              	100.00%		P54109              	100.00%
Bootstrap support for Q4Q0Q0 as seed ortholog is 100%.
Bootstrap support for P54109 as seed ortholog is 100%.

Group of orthologs #89. Best score 146 bits
Score difference with first non-orthologous sequence - L.major:146 M.jannaschii:146

Q4Q7G8              	100.00%		Q58473              	100.00%
Bootstrap support for Q4Q7G8 as seed ortholog is 100%.
Bootstrap support for Q58473 as seed ortholog is 100%.

Group of orthologs #90. Best score 145 bits
Score difference with first non-orthologous sequence - L.major:145 M.jannaschii:145

E9ADK8              	100.00%		Q58810              	100.00%
Q4QBE4              	15.07%		
Bootstrap support for E9ADK8 as seed ortholog is 100%.
Bootstrap support for Q58810 as seed ortholog is 100%.

Group of orthologs #91. Best score 145 bits
Score difference with first non-orthologous sequence - L.major:145 M.jannaschii:145

Q4QEW1              	100.00%		Q58885              	100.00%
Bootstrap support for Q4QEW1 as seed ortholog is 100%.
Bootstrap support for Q58885 as seed ortholog is 100%.

Group of orthologs #92. Best score 144 bits
Score difference with first non-orthologous sequence - L.major:144 M.jannaschii:144

Q9U1E1              	100.00%		Q58661              	100.00%
Bootstrap support for Q9U1E1 as seed ortholog is 100%.
Bootstrap support for Q58661 as seed ortholog is 100%.

Group of orthologs #93. Best score 142 bits
Score difference with first non-orthologous sequence - L.major:142 M.jannaschii:142

E9AFK3              	100.00%		P54037              	100.00%
Bootstrap support for E9AFK3 as seed ortholog is 100%.
Bootstrap support for P54037 as seed ortholog is 100%.

Group of orthologs #94. Best score 141 bits
Score difference with first non-orthologous sequence - L.major:5 M.jannaschii:141

E9AD74              	100.00%		Q58639              	100.00%
E9AD75              	89.34%		Q59056              	11.53%
Q4QGW0              	48.00%		
Q4QGV7              	48.00%		
Q4QGV3              	39.33%		
Q4QGV5              	37.62%		
Q4QGV8              	33.74%		
E9ACA5              	32.69%		
Q4QFA9              	29.88%		
E9ADR4              	13.52%		
Bootstrap support for E9AD74 as seed ortholog is 53%.
Alternative seed ortholog is Q4Q8S4 (5 bits away from this cluster)
Bootstrap support for Q58639 as seed ortholog is 100%.

Group of orthologs #95. Best score 141 bits
Score difference with first non-orthologous sequence - L.major:141 M.jannaschii:141

Q4Q8H1              	100.00%		P54021              	100.00%
Q4Q6S9              	48.98%		
Bootstrap support for Q4Q8H1 as seed ortholog is 100%.
Bootstrap support for P54021 as seed ortholog is 100%.

Group of orthologs #96. Best score 139 bits
Score difference with first non-orthologous sequence - L.major:139 M.jannaschii:65

Q4Q0E8              	100.00%		Q58558              	100.00%
Bootstrap support for Q4Q0E8 as seed ortholog is 100%.
Bootstrap support for Q58558 as seed ortholog is 96%.

Group of orthologs #97. Best score 138 bits
Score difference with first non-orthologous sequence - L.major:138 M.jannaschii:138

Q4Q842              	100.00%		Q60326              	100.00%
                    	       		Q59007              	13.93%
Bootstrap support for Q4Q842 as seed ortholog is 100%.
Bootstrap support for Q60326 as seed ortholog is 100%.

Group of orthologs #98. Best score 138 bits
Score difference with first non-orthologous sequence - L.major:138 M.jannaschii:138

Q4QG31              	100.00%		P54039              	100.00%
Bootstrap support for Q4QG31 as seed ortholog is 100%.
Bootstrap support for P54039 as seed ortholog is 100%.

Group of orthologs #99. Best score 138 bits
Score difference with first non-orthologous sequence - L.major:138 M.jannaschii:138

Q4QGW3              	100.00%		P54041              	100.00%
Bootstrap support for Q4QGW3 as seed ortholog is 100%.
Bootstrap support for P54041 as seed ortholog is 100%.

Group of orthologs #100. Best score 137 bits
Score difference with first non-orthologous sequence - L.major:137 M.jannaschii:137

Q4Q3M1              	100.00%		P54012              	100.00%
Bootstrap support for Q4Q3M1 as seed ortholog is 100%.
Bootstrap support for P54012 as seed ortholog is 100%.

Group of orthologs #101. Best score 136 bits
Score difference with first non-orthologous sequence - L.major:30 M.jannaschii:59

Q4Q455              	100.00%		Q60317              	100.00%
                    	       		Q58097              	23.34%
Bootstrap support for Q4Q455 as seed ortholog is 74%.
Alternative seed ortholog is Q4Q1I5 (30 bits away from this cluster)
Bootstrap support for Q60317 as seed ortholog is 92%.

Group of orthologs #102. Best score 136 bits
Score difference with first non-orthologous sequence - L.major:136 M.jannaschii:136

E9ADW5              	100.00%		P54015              	100.00%
Bootstrap support for E9ADW5 as seed ortholog is 100%.
Bootstrap support for P54015 as seed ortholog is 100%.

Group of orthologs #103. Best score 133 bits
Score difference with first non-orthologous sequence - L.major:133 M.jannaschii:133

Q4Q1V1              	100.00%		P54020              	100.00%
Q4QIM3              	100.00%		
Bootstrap support for Q4Q1V1 as seed ortholog is 100%.
Bootstrap support for Q4QIM3 as seed ortholog is 100%.
Bootstrap support for P54020 as seed ortholog is 100%.

Group of orthologs #104. Best score 133 bits
Score difference with first non-orthologous sequence - L.major:133 M.jannaschii:133

O97213              	100.00%		Q57963              	100.00%
Bootstrap support for O97213 as seed ortholog is 100%.
Bootstrap support for Q57963 as seed ortholog is 100%.

Group of orthologs #105. Best score 131 bits
Score difference with first non-orthologous sequence - L.major:131 M.jannaschii:131

Q4Q3Z4              	100.00%		Q58761              	100.00%
Q4QI56              	38.62%		
Q4Q0M2              	37.59%		
Q4QIB8              	7.76%		
Bootstrap support for Q4Q3Z4 as seed ortholog is 100%.
Bootstrap support for Q58761 as seed ortholog is 100%.

Group of orthologs #106. Best score 130 bits
Score difference with first non-orthologous sequence - L.major:130 M.jannaschii:130

E9ADU1              	100.00%		Q58936              	100.00%
Bootstrap support for E9ADU1 as seed ortholog is 100%.
Bootstrap support for Q58936 as seed ortholog is 100%.

Group of orthologs #107. Best score 129 bits
Score difference with first non-orthologous sequence - L.major:129 M.jannaschii:129

E9ACF3              	100.00%		Q58952              	100.00%
Bootstrap support for E9ACF3 as seed ortholog is 100%.
Bootstrap support for Q58952 as seed ortholog is 100%.

Group of orthologs #108. Best score 129 bits
Score difference with first non-orthologous sequence - L.major:129 M.jannaschii:85

Q4QI30              	100.00%		Q58030              	100.00%
Bootstrap support for Q4QI30 as seed ortholog is 100%.
Bootstrap support for Q58030 as seed ortholog is 99%.

Group of orthologs #109. Best score 128 bits
Score difference with first non-orthologous sequence - L.major:128 M.jannaschii:128

Q4QBV0              	100.00%		P54018              	100.00%
Bootstrap support for Q4QBV0 as seed ortholog is 100%.
Bootstrap support for P54018 as seed ortholog is 100%.

Group of orthologs #110. Best score 127 bits
Score difference with first non-orthologous sequence - L.major:127 M.jannaschii:127

Q4Q1Y2              	100.00%		P54019              	100.00%
Q4Q1Y3              	100.00%		
Bootstrap support for Q4Q1Y2 as seed ortholog is 100%.
Bootstrap support for Q4Q1Y3 as seed ortholog is 100%.
Bootstrap support for P54019 as seed ortholog is 100%.

Group of orthologs #111. Best score 126 bits
Score difference with first non-orthologous sequence - L.major:126 M.jannaschii:126

Q4QBG5              	100.00%		Q58501              	100.00%
Bootstrap support for Q4QBG5 as seed ortholog is 100%.
Bootstrap support for Q58501 as seed ortholog is 100%.

Group of orthologs #112. Best score 124 bits
Score difference with first non-orthologous sequence - L.major:124 M.jannaschii:124

Q4QBH2              	100.00%		Q58146              	100.00%
Q4QF76              	27.63%		
Q4QF68              	27.03%		
Q4QF80              	27.03%		
Q4QF74              	26.43%		
Bootstrap support for Q4QBH2 as seed ortholog is 100%.
Bootstrap support for Q58146 as seed ortholog is 100%.

Group of orthologs #113. Best score 124 bits
Score difference with first non-orthologous sequence - L.major:124 M.jannaschii:124

Q4QGF2              	100.00%		Q58767              	100.00%
Bootstrap support for Q4QGF2 as seed ortholog is 100%.
Bootstrap support for Q58767 as seed ortholog is 100%.

Group of orthologs #114. Best score 122 bits
Score difference with first non-orthologous sequence - L.major:122 M.jannaschii:122

Q4Q5J0              	100.00%		Q57675              	100.00%
Q4QAY7              	33.55%		
Bootstrap support for Q4Q5J0 as seed ortholog is 100%.
Bootstrap support for Q57675 as seed ortholog is 100%.

Group of orthologs #115. Best score 122 bits
Score difference with first non-orthologous sequence - L.major:122 M.jannaschii:122

Q4Q7U7              	100.00%		Q58435              	100.00%
Bootstrap support for Q4Q7U7 as seed ortholog is 100%.
Bootstrap support for Q58435 as seed ortholog is 100%.

Group of orthologs #116. Best score 121 bits
Score difference with first non-orthologous sequence - L.major:121 M.jannaschii:121

Q4QJ37              	100.00%		P54043              	100.00%
Q4QJ39              	100.00%		
Bootstrap support for Q4QJ37 as seed ortholog is 100%.
Bootstrap support for Q4QJ39 as seed ortholog is 100%.
Bootstrap support for P54043 as seed ortholog is 100%.

Group of orthologs #117. Best score 121 bits
Score difference with first non-orthologous sequence - L.major:64 M.jannaschii:121

Q4QF82              	100.00%		Q58270              	100.00%
Bootstrap support for Q4QF82 as seed ortholog is 95%.
Bootstrap support for Q58270 as seed ortholog is 100%.

Group of orthologs #118. Best score 120 bits
Score difference with first non-orthologous sequence - L.major:120 M.jannaschii:120

Q4QC89              	100.00%		P54062              	100.00%
Bootstrap support for Q4QC89 as seed ortholog is 100%.
Bootstrap support for P54062 as seed ortholog is 100%.

Group of orthologs #119. Best score 119 bits
Score difference with first non-orthologous sequence - L.major:119 M.jannaschii:119

Q4Q431              	100.00%		Q58093              	100.00%
E9AFJ2              	20.59%		
Bootstrap support for Q4Q431 as seed ortholog is 100%.
Bootstrap support for Q58093 as seed ortholog is 100%.

Group of orthologs #120. Best score 119 bits
Score difference with first non-orthologous sequence - L.major:119 M.jannaschii:119

E9AEW4              	100.00%		Q58597              	100.00%
Bootstrap support for E9AEW4 as seed ortholog is 100%.
Bootstrap support for Q58597 as seed ortholog is 100%.

Group of orthologs #121. Best score 118 bits
Score difference with first non-orthologous sequence - L.major:118 M.jannaschii:118

Q4Q1Y7              	100.00%		Q60357              	100.00%
Bootstrap support for Q4Q1Y7 as seed ortholog is 100%.
Bootstrap support for Q60357 as seed ortholog is 100%.

Group of orthologs #122. Best score 114 bits
Score difference with first non-orthologous sequence - L.major:114 M.jannaschii:114

Q4Q2L9              	100.00%		Q57725              	100.00%
                    	       		Q58077              	6.97%
Bootstrap support for Q4Q2L9 as seed ortholog is 100%.
Bootstrap support for Q57725 as seed ortholog is 100%.

Group of orthologs #123. Best score 113 bits
Score difference with first non-orthologous sequence - L.major:17 M.jannaschii:113

Q4Q1Q9              	100.00%		Q58634              	100.00%
Bootstrap support for Q4Q1Q9 as seed ortholog is 73%.
Alternative seed ortholog is E9AFK8 (17 bits away from this cluster)
Bootstrap support for Q58634 as seed ortholog is 100%.

Group of orthologs #124. Best score 113 bits
Score difference with first non-orthologous sequence - L.major:113 M.jannaschii:113

Q4Q580              	100.00%		Q58118              	100.00%
Bootstrap support for Q4Q580 as seed ortholog is 100%.
Bootstrap support for Q58118 as seed ortholog is 100%.

Group of orthologs #125. Best score 111 bits
Score difference with first non-orthologous sequence - L.major:52 M.jannaschii:111

E9ADB9              	100.00%		P54049              	100.00%
Bootstrap support for E9ADB9 as seed ortholog is 96%.
Bootstrap support for P54049 as seed ortholog is 100%.

Group of orthologs #126. Best score 109 bits
Score difference with first non-orthologous sequence - L.major:14 M.jannaschii:109

Q4Q3V7              	100.00%		Q57664              	100.00%
                    	       		Q58455              	11.20%
Bootstrap support for Q4Q3V7 as seed ortholog is 56%.
Alternative seed ortholog is Q4Q8W9 (14 bits away from this cluster)
Bootstrap support for Q57664 as seed ortholog is 100%.

Group of orthologs #127. Best score 109 bits
Score difference with first non-orthologous sequence - L.major:109 M.jannaschii:109

E9ACF2              	100.00%		Q58369              	100.00%
Bootstrap support for E9ACF2 as seed ortholog is 100%.
Bootstrap support for Q58369 as seed ortholog is 100%.

Group of orthologs #128. Best score 109 bits
Score difference with first non-orthologous sequence - L.major:109 M.jannaschii:109

Q4Q7W9              	100.00%		Q58086              	100.00%
Bootstrap support for Q4Q7W9 as seed ortholog is 100%.
Bootstrap support for Q58086 as seed ortholog is 100%.

Group of orthologs #129. Best score 109 bits
Score difference with first non-orthologous sequence - L.major:109 M.jannaschii:109

Q4QFL5              	100.00%		Q58981              	100.00%
Bootstrap support for Q4QFL5 as seed ortholog is 100%.
Bootstrap support for Q58981 as seed ortholog is 100%.

Group of orthologs #130. Best score 108 bits
Score difference with first non-orthologous sequence - L.major:108 M.jannaschii:108

E9AF09              	100.00%		P54044              	100.00%
E9AF10              	100.00%		
Bootstrap support for E9AF09 as seed ortholog is 100%.
Bootstrap support for E9AF10 as seed ortholog is 100%.
Bootstrap support for P54044 as seed ortholog is 100%.

Group of orthologs #131. Best score 106 bits
Score difference with first non-orthologous sequence - L.major:106 M.jannaschii:106

E9AEP5              	100.00%		Q58032              	100.00%
Bootstrap support for E9AEP5 as seed ortholog is 100%.
Bootstrap support for Q58032 as seed ortholog is 100%.

Group of orthologs #132. Best score 104 bits
Score difference with first non-orthologous sequence - L.major:104 M.jannaschii:104

Q4QIR8              	100.00%		Q58997              	100.00%
Bootstrap support for Q4QIR8 as seed ortholog is 100%.
Bootstrap support for Q58997 as seed ortholog is 100%.

Group of orthologs #133. Best score 103 bits
Score difference with first non-orthologous sequence - L.major:103 M.jannaschii:103

Q4Q6V5              	100.00%		P54042              	100.00%
Q4QC91              	100.00%		
Bootstrap support for Q4Q6V5 as seed ortholog is 100%.
Bootstrap support for Q4QC91 as seed ortholog is 100%.
Bootstrap support for P54042 as seed ortholog is 100%.

Group of orthologs #134. Best score 103 bits
Score difference with first non-orthologous sequence - L.major:103 M.jannaschii:103

Q4QEW7              	100.00%		Q58070              	100.00%
Bootstrap support for Q4QEW7 as seed ortholog is 100%.
Bootstrap support for Q58070 as seed ortholog is 100%.

Group of orthologs #135. Best score 102 bits
Score difference with first non-orthologous sequence - L.major:1 M.jannaschii:102

E9ACB3              	100.00%		Q58771              	100.00%
Bootstrap support for E9ACB3 as seed ortholog is 45%.
Alternative seed ortholog is Q4QBC1 (1 bits away from this cluster)
Bootstrap support for Q58771 as seed ortholog is 100%.

Group of orthologs #136. Best score 101 bits
Score difference with first non-orthologous sequence - L.major:101 M.jannaschii:101

Q4Q4A0              	100.00%		P54034              	100.00%
Bootstrap support for Q4Q4A0 as seed ortholog is 100%.
Bootstrap support for P54034 as seed ortholog is 100%.

Group of orthologs #137. Best score 97 bits
Score difference with first non-orthologous sequence - L.major:97 M.jannaschii:97

Q4QGN9              	100.00%		Q59000              	100.00%
Bootstrap support for Q4QGN9 as seed ortholog is 100%.
Bootstrap support for Q59000 as seed ortholog is 100%.

Group of orthologs #138. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:96 M.jannaschii:96

E9ADG1              	100.00%		Q58728              	100.00%
E9ACV1              	13.56%		
Bootstrap support for E9ADG1 as seed ortholog is 100%.
Bootstrap support for Q58728 as seed ortholog is 100%.

Group of orthologs #139. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:96 M.jannaschii:96

E9ACP3              	100.00%		Q57581              	100.00%
Bootstrap support for E9ACP3 as seed ortholog is 100%.
Bootstrap support for Q57581 as seed ortholog is 100%.

Group of orthologs #140. Best score 96 bits
Score difference with first non-orthologous sequence - L.major:96 M.jannaschii:96

Q4QF35              	100.00%		Q57697              	100.00%
Bootstrap support for Q4QF35 as seed ortholog is 100%.
Bootstrap support for Q57697 as seed ortholog is 100%.

Group of orthologs #141. Best score 95 bits
Score difference with first non-orthologous sequence - L.major:95 M.jannaschii:95

Q4Q9A5              	100.00%		P54024              	100.00%
Bootstrap support for Q4Q9A5 as seed ortholog is 100%.
Bootstrap support for P54024 as seed ortholog is 100%.

Group of orthologs #142. Best score 94 bits
Score difference with first non-orthologous sequence - L.major:94 M.jannaschii:94

E9AF68              	100.00%		Q59050              	100.00%
Bootstrap support for E9AF68 as seed ortholog is 100%.
Bootstrap support for Q59050 as seed ortholog is 100%.

Group of orthologs #143. Best score 94 bits
Score difference with first non-orthologous sequence - L.major:94 M.jannaschii:94

Q4QFW1              	100.00%		Q58276              	100.00%
Bootstrap support for Q4QFW1 as seed ortholog is 100%.
Bootstrap support for Q58276 as seed ortholog is 100%.

Group of orthologs #144. Best score 93 bits
Score difference with first non-orthologous sequence - L.major:93 M.jannaschii:93

Q4Q6K7              	100.00%		Q58487              	100.00%
Bootstrap support for Q4Q6K7 as seed ortholog is 100%.
Bootstrap support for Q58487 as seed ortholog is 100%.

Group of orthologs #145. Best score 92 bits
Score difference with first non-orthologous sequence - L.major:92 M.jannaschii:92

E9AEE8              	100.00%		P54057              	100.00%
Q4Q2R6              	100.00%		
Bootstrap support for E9AEE8 as seed ortholog is 100%.
Bootstrap support for Q4Q2R6 as seed ortholog is 100%.
Bootstrap support for P54057 as seed ortholog is 100%.

Group of orthologs #146. Best score 92 bits
Score difference with first non-orthologous sequence - L.major:92 M.jannaschii:92

Q4Q0V1              	100.00%		Q57679              	100.00%
Bootstrap support for Q4Q0V1 as seed ortholog is 100%.
Bootstrap support for Q57679 as seed ortholog is 100%.

Group of orthologs #147. Best score 89 bits
Score difference with first non-orthologous sequence - L.major:12 M.jannaschii:89

Q4Q3J4              	100.00%		Q60176              	100.00%
Q4Q3J2              	68.35%		
Q4Q3J3              	44.76%		
Q4QDF0              	29.59%		
Q4Q3J5              	15.54%		
Bootstrap support for Q4Q3J4 as seed ortholog is 62%.
Alternative seed ortholog is Q4Q7X6 (12 bits away from this cluster)
Bootstrap support for Q60176 as seed ortholog is 100%.

Group of orthologs #148. Best score 89 bits
Score difference with first non-orthologous sequence - L.major:89 M.jannaschii:89

Q4QAC5              	100.00%		P54038              	100.00%
Bootstrap support for Q4QAC5 as seed ortholog is 100%.
Bootstrap support for P54038 as seed ortholog is 100%.

Group of orthologs #149. Best score 88 bits
Score difference with first non-orthologous sequence - L.major:88 M.jannaschii:88

Q9U0T7              	100.00%		Q58339              	100.00%
Bootstrap support for Q9U0T7 as seed ortholog is 100%.
Bootstrap support for Q58339 as seed ortholog is 100%.

Group of orthologs #150. Best score 87 bits
Score difference with first non-orthologous sequence - L.major:87 M.jannaschii:87

Q4Q0X1              	100.00%		Q60331              	100.00%
Q4QFE1              	6.65%		
Bootstrap support for Q4Q0X1 as seed ortholog is 100%.
Bootstrap support for Q60331 as seed ortholog is 100%.

Group of orthologs #151. Best score 87 bits
Score difference with first non-orthologous sequence - L.major:87 M.jannaschii:87

Q4Q420              	100.00%		Q59002              	100.00%
Bootstrap support for Q4Q420 as seed ortholog is 100%.
Bootstrap support for Q59002 as seed ortholog is 100%.

Group of orthologs #152. Best score 87 bits
Score difference with first non-orthologous sequence - L.major:87 M.jannaschii:87

Q4Q9H1              	100.00%		Q57638              	100.00%
Bootstrap support for Q4Q9H1 as seed ortholog is 100%.
Bootstrap support for Q57638 as seed ortholog is 100%.

Group of orthologs #153. Best score 87 bits
Score difference with first non-orthologous sequence - L.major:87 M.jannaschii:87

Q4QCN7              	100.00%		P54036              	100.00%
Bootstrap support for Q4QCN7 as seed ortholog is 100%.
Bootstrap support for P54036 as seed ortholog is 100%.

Group of orthologs #154. Best score 86 bits
Score difference with first non-orthologous sequence - L.major:86 M.jannaschii:86

E9AD51              	100.00%		Q57936              	100.00%
                    	       		Q58758              	34.25%
Bootstrap support for E9AD51 as seed ortholog is 100%.
Bootstrap support for Q57936 as seed ortholog is 100%.

Group of orthologs #155. Best score 86 bits
Score difference with first non-orthologous sequence - L.major:86 M.jannaschii:86

Q4QJ20              	100.00%		P54016              	100.00%
Bootstrap support for Q4QJ20 as seed ortholog is 100%.
Bootstrap support for P54016 as seed ortholog is 100%.

Group of orthologs #156. Best score 86 bits
Score difference with first non-orthologous sequence - L.major:86 M.jannaschii:86

Q4QGR5              	100.00%		Q58497              	100.00%
Bootstrap support for Q4QGR5 as seed ortholog is 100%.
Bootstrap support for Q58497 as seed ortholog is 100%.

Group of orthologs #157. Best score 86 bits
Score difference with first non-orthologous sequence - L.major:17 M.jannaschii:86

Q8ISS8              	100.00%		Q57599              	100.00%
Bootstrap support for Q8ISS8 as seed ortholog is 76%.
Bootstrap support for Q57599 as seed ortholog is 100%.

Group of orthologs #158. Best score 86 bits
Score difference with first non-orthologous sequence - L.major:86 M.jannaschii:86

Q4QIY6              	100.00%		Q60363              	100.00%
Bootstrap support for Q4QIY6 as seed ortholog is 100%.
Bootstrap support for Q60363 as seed ortholog is 100%.

Group of orthologs #159. Best score 84 bits
Score difference with first non-orthologous sequence - L.major:19 M.jannaschii:84

Q4QF32              	100.00%		P54066              	100.00%
Bootstrap support for Q4QF32 as seed ortholog is 83%.
Bootstrap support for P54066 as seed ortholog is 100%.

Group of orthologs #160. Best score 83 bits
Score difference with first non-orthologous sequence - L.major:83 M.jannaschii:83

E9AEC8              	100.00%		Q58352              	100.00%
Q4Q8A5              	8.90%		
Q4QAA2              	5.08%		
Bootstrap support for E9AEC8 as seed ortholog is 100%.
Bootstrap support for Q58352 as seed ortholog is 100%.

Group of orthologs #161. Best score 82 bits
Score difference with first non-orthologous sequence - L.major:82 M.jannaschii:82

P25204              	100.00%		P54055              	100.00%
Bootstrap support for P25204 as seed ortholog is 100%.
Bootstrap support for P54055 as seed ortholog is 100%.

Group of orthologs #162. Best score 82 bits
Score difference with first non-orthologous sequence - L.major:82 M.jannaschii:82

Q4Q5B3              	100.00%		Q58747              	100.00%
Bootstrap support for Q4Q5B3 as seed ortholog is 100%.
Bootstrap support for Q58747 as seed ortholog is 100%.

Group of orthologs #163. Best score 82 bits
Score difference with first non-orthologous sequence - L.major:82 M.jannaschii:82

Q4Q7A6              	100.00%		Q58450              	100.00%
Bootstrap support for Q4Q7A6 as seed ortholog is 100%.
Bootstrap support for Q58450 as seed ortholog is 100%.

Group of orthologs #164. Best score 82 bits
Score difference with first non-orthologous sequence - L.major:82 M.jannaschii:82

Q4QDX9              	100.00%		P54050              	100.00%
Bootstrap support for Q4QDX9 as seed ortholog is 100%.
Bootstrap support for P54050 as seed ortholog is 100%.

Group of orthologs #165. Best score 82 bits
Score difference with first non-orthologous sequence - L.major:26 M.jannaschii:82

Q4QI58              	100.00%		Q58741              	100.00%
Bootstrap support for Q4QI58 as seed ortholog is 54%.
Alternative seed ortholog is Q4Q1J3 (26 bits away from this cluster)
Bootstrap support for Q58741 as seed ortholog is 100%.

Group of orthologs #166. Best score 81 bits
Score difference with first non-orthologous sequence - L.major:81 M.jannaschii:81

E9AE39              	100.00%		Q57907              	100.00%
Bootstrap support for E9AE39 as seed ortholog is 100%.
Bootstrap support for Q57907 as seed ortholog is 100%.

Group of orthologs #167. Best score 80 bits
Score difference with first non-orthologous sequence - L.major:80 M.jannaschii:3

E9AE16              	100.00%		Q57899              	100.00%
Q4QIR7              	22.31%		
Bootstrap support for E9AE16 as seed ortholog is 100%.
Bootstrap support for Q57899 as seed ortholog is 47%.
Alternative seed ortholog is Q58892 (3 bits away from this cluster)

Group of orthologs #168. Best score 80 bits
Score difference with first non-orthologous sequence - L.major:80 M.jannaschii:80

Q4QEU3              	100.00%		Q58370              	100.00%
Bootstrap support for Q4QEU3 as seed ortholog is 100%.
Bootstrap support for Q58370 as seed ortholog is 100%.

Group of orthologs #169. Best score 79 bits
Score difference with first non-orthologous sequence - L.major:79 M.jannaschii:79

Q4Q1P6              	100.00%		Q57711              	100.00%
                    	       		Q58350              	42.43%
                    	       		O06917              	14.64%
Bootstrap support for Q4Q1P6 as seed ortholog is 100%.
Bootstrap support for Q57711 as seed ortholog is 100%.

Group of orthologs #170. Best score 79 bits
Score difference with first non-orthologous sequence - L.major:79 M.jannaschii:79

Q4Q5P2              	100.00%		P54033              	100.00%
Q4QAX6              	100.00%		
Bootstrap support for Q4Q5P2 as seed ortholog is 100%.
Bootstrap support for Q4QAX6 as seed ortholog is 100%.
Bootstrap support for P54033 as seed ortholog is 100%.

Group of orthologs #171. Best score 77 bits
Score difference with first non-orthologous sequence - L.major:77 M.jannaschii:77

Q4Q824              	100.00%		Q57598              	100.00%
Bootstrap support for Q4Q824 as seed ortholog is 100%.
Bootstrap support for Q57598 as seed ortholog is 100%.

Group of orthologs #172. Best score 76 bits
Score difference with first non-orthologous sequence - L.major:76 M.jannaschii:76

E9AFK0              	100.00%		P54047              	100.00%
Bootstrap support for E9AFK0 as seed ortholog is 100%.
Bootstrap support for P54047 as seed ortholog is 100%.

Group of orthologs #173. Best score 76 bits
Score difference with first non-orthologous sequence - L.major:76 M.jannaschii:76

Q4Q0A0              	100.00%		Q57636              	100.00%
Bootstrap support for Q4Q0A0 as seed ortholog is 100%.
Bootstrap support for Q57636 as seed ortholog is 100%.

Group of orthologs #174. Best score 75 bits
Score difference with first non-orthologous sequence - L.major:75 M.jannaschii:75

Q4QAA9              	100.00%		P54030              	100.00%
Bootstrap support for Q4QAA9 as seed ortholog is 100%.
Bootstrap support for P54030 as seed ortholog is 100%.

Group of orthologs #175. Best score 74 bits
Score difference with first non-orthologous sequence - L.major:74 M.jannaschii:2

Q4Q4U1              	100.00%		Q58931              	100.00%
Q4QJG7              	9.69%		
Bootstrap support for Q4Q4U1 as seed ortholog is 100%.
Bootstrap support for Q58931 as seed ortholog is 51%.
Alternative seed ortholog is Q58065 (2 bits away from this cluster)

Group of orthologs #176. Best score 74 bits
Score difference with first non-orthologous sequence - L.major:74 M.jannaschii:74

Q4QCE7              	100.00%		Q57955              	100.00%
Q4QAJ4              	16.09%		
Bootstrap support for Q4QCE7 as seed ortholog is 100%.
Bootstrap support for Q57955 as seed ortholog is 100%.

Group of orthologs #177. Best score 74 bits
Score difference with first non-orthologous sequence - L.major:74 M.jannaschii:74

Q4Q5M0              	100.00%		Q58220              	100.00%
Bootstrap support for Q4Q5M0 as seed ortholog is 100%.
Bootstrap support for Q58220 as seed ortholog is 100%.

Group of orthologs #178. Best score 73 bits
Score difference with first non-orthologous sequence - L.major:73 M.jannaschii:73

Q4Q6Y2              	100.00%		Q58504              	100.00%
Bootstrap support for Q4Q6Y2 as seed ortholog is 100%.
Bootstrap support for Q58504 as seed ortholog is 100%.

Group of orthologs #179. Best score 72 bits
Score difference with first non-orthologous sequence - L.major:72 M.jannaschii:72

E9AEH2              	100.00%		P54011              	100.00%
E9AFY3              	87.39%		
Bootstrap support for E9AEH2 as seed ortholog is 100%.
Bootstrap support for P54011 as seed ortholog is 100%.

Group of orthologs #180. Best score 72 bits
Score difference with first non-orthologous sequence - L.major:72 M.jannaschii:72

E9AEI2              	100.00%		Q58092              	100.00%
Q4Q9R8              	17.14%		
Bootstrap support for E9AEI2 as seed ortholog is 100%.
Bootstrap support for Q58092 as seed ortholog is 100%.

Group of orthologs #181. Best score 72 bits
Score difference with first non-orthologous sequence - L.major:72 M.jannaschii:72

Q4QH62              	100.00%		Q58827              	100.00%
Bootstrap support for Q4QH62 as seed ortholog is 100%.
Bootstrap support for Q58827 as seed ortholog is 100%.

Group of orthologs #182. Best score 71 bits
Score difference with first non-orthologous sequence - L.major:3 M.jannaschii:71

Q4QBG9              	100.00%		Q57757              	100.00%
Bootstrap support for Q4QBG9 as seed ortholog is 52%.
Alternative seed ortholog is E9AEX1 (3 bits away from this cluster)
Bootstrap support for Q57757 as seed ortholog is 100%.

Group of orthologs #183. Best score 70 bits
Score difference with first non-orthologous sequence - L.major:70 M.jannaschii:70

E9ADL6              	100.00%		Q57648              	100.00%
Bootstrap support for E9ADL6 as seed ortholog is 100%.
Bootstrap support for Q57648 as seed ortholog is 100%.

Group of orthologs #184. Best score 70 bits
Score difference with first non-orthologous sequence - L.major:70 M.jannaschii:70

Q4Q8G4              	100.00%		P54029              	100.00%
Bootstrap support for Q4Q8G4 as seed ortholog is 100%.
Bootstrap support for P54029 as seed ortholog is 100%.

Group of orthologs #185. Best score 70 bits
Score difference with first non-orthologous sequence - L.major:70 M.jannaschii:70

Q4Q6F6              	100.00%		Q59014              	100.00%
Bootstrap support for Q4Q6F6 as seed ortholog is 100%.
Bootstrap support for Q59014 as seed ortholog is 100%.

Group of orthologs #186. Best score 69 bits
Score difference with first non-orthologous sequence - L.major:69 M.jannaschii:69

Q4Q3B9              	100.00%		P54023              	100.00%
Q4QFG2              	100.00%		
Bootstrap support for Q4Q3B9 as seed ortholog is 100%.
Bootstrap support for Q4QFG2 as seed ortholog is 100%.
Bootstrap support for P54023 as seed ortholog is 100%.

Group of orthologs #187. Best score 69 bits
Score difference with first non-orthologous sequence - L.major:69 M.jannaschii:69

E9AEZ2              	100.00%		Q60335              	100.00%
Bootstrap support for E9AEZ2 as seed ortholog is 100%.
Bootstrap support for Q60335 as seed ortholog is 100%.

Group of orthologs #188. Best score 69 bits
Score difference with first non-orthologous sequence - L.major:69 M.jannaschii:69

Q4Q6A0              	100.00%		Q57709              	100.00%
Bootstrap support for Q4Q6A0 as seed ortholog is 100%.
Bootstrap support for Q57709 as seed ortholog is 100%.

Group of orthologs #189. Best score 69 bits
Score difference with first non-orthologous sequence - L.major:69 M.jannaschii:69

Q4QC01              	100.00%		P54051              	100.00%
Bootstrap support for Q4QC01 as seed ortholog is 100%.
Bootstrap support for P54051 as seed ortholog is 100%.

Group of orthologs #190. Best score 67 bits
Score difference with first non-orthologous sequence - L.major:67 M.jannaschii:67

E9AEK1              	100.00%		P54061              	100.00%
Bootstrap support for E9AEK1 as seed ortholog is 100%.
Bootstrap support for P54061 as seed ortholog is 100%.

Group of orthologs #191. Best score 66 bits
Score difference with first non-orthologous sequence - L.major:66 M.jannaschii:66

Q4Q5H7              	100.00%		Q58040              	100.00%
Bootstrap support for Q4Q5H7 as seed ortholog is 100%.
Bootstrap support for Q58040 as seed ortholog is 100%.

Group of orthologs #192. Best score 66 bits
Score difference with first non-orthologous sequence - L.major:66 M.jannaschii:66

Q4Q6Y9              	100.00%		Q57885              	100.00%
Bootstrap support for Q4Q6Y9 as seed ortholog is 100%.
Bootstrap support for Q57885 as seed ortholog is 100%.

Group of orthologs #193. Best score 65 bits
Score difference with first non-orthologous sequence - L.major:65 M.jannaschii:9

E9AE44              	100.00%		Q58053              	100.00%
Q4Q5Z6              	32.46%		
Q4Q5Z7              	29.31%		
Bootstrap support for E9AE44 as seed ortholog is 100%.
Bootstrap support for Q58053 as seed ortholog is 56%.
Alternative seed ortholog is Q58065 (9 bits away from this cluster)

Group of orthologs #194. Best score 65 bits
Score difference with first non-orthologous sequence - L.major:65 M.jannaschii:65

Q4QGN0              	100.00%		Q58874              	100.00%
Bootstrap support for Q4QGN0 as seed ortholog is 100%.
Bootstrap support for Q58874 as seed ortholog is 100%.

Group of orthologs #195. Best score 63 bits
Score difference with first non-orthologous sequence - L.major:63 M.jannaschii:63

Q4QH77              	100.00%		Q57752              	100.00%
Bootstrap support for Q4QH77 as seed ortholog is 100%.
Bootstrap support for Q57752 as seed ortholog is 100%.

Group of orthologs #196. Best score 62 bits
Score difference with first non-orthologous sequence - L.major:62 M.jannaschii:62

E9AF27              	100.00%		P54010              	100.00%
Q4QC11              	100.00%		
Bootstrap support for E9AF27 as seed ortholog is 100%.
Bootstrap support for Q4QC11 as seed ortholog is 100%.
Bootstrap support for P54010 as seed ortholog is 100%.

Group of orthologs #197. Best score 62 bits
Score difference with first non-orthologous sequence - L.major:62 M.jannaschii:62

Q4QEG9              	100.00%		Q58860              	100.00%
Q4Q159              	16.99%		
Bootstrap support for Q4QEG9 as seed ortholog is 100%.
Bootstrap support for Q58860 as seed ortholog is 100%.

Group of orthologs #198. Best score 62 bits
Score difference with first non-orthologous sequence - L.major:62 M.jannaschii:62

Q4Q931              	100.00%		P54065              	100.00%
Bootstrap support for Q4Q931 as seed ortholog is 100%.
Bootstrap support for P54065 as seed ortholog is 100%.

Group of orthologs #199. Best score 62 bits
Score difference with first non-orthologous sequence - L.major:62 M.jannaschii:62

Q4QHV8              	100.00%		Q58905              	100.00%
Bootstrap support for Q4QHV8 as seed ortholog is 100%.
Bootstrap support for Q58905 as seed ortholog is 100%.

Group of orthologs #200. Best score 61 bits
Score difference with first non-orthologous sequence - L.major:61 M.jannaschii:61

Q4FX73              	100.00%		P54059              	100.00%
Bootstrap support for Q4FX73 as seed ortholog is 100%.
Bootstrap support for P54059 as seed ortholog is 100%.

Group of orthologs #201. Best score 61 bits
Score difference with first non-orthologous sequence - L.major:61 M.jannaschii:61

Q4Q874              	100.00%		Q58103              	100.00%
Bootstrap support for Q4Q874 as seed ortholog is 100%.
Bootstrap support for Q58103 as seed ortholog is 100%.

Group of orthologs #202. Best score 60 bits
Score difference with first non-orthologous sequence - L.major:60 M.jannaschii:60

Q4Q5V2              	100.00%		Q58193              	100.00%
Bootstrap support for Q4Q5V2 as seed ortholog is 100%.
Bootstrap support for Q58193 as seed ortholog is 100%.

Group of orthologs #203. Best score 60 bits
Score difference with first non-orthologous sequence - L.major:60 M.jannaschii:60

Q4QJ42              	100.00%		Q60182              	100.00%
Bootstrap support for Q4QJ42 as seed ortholog is 100%.
Bootstrap support for Q60182 as seed ortholog is 100%.

Group of orthologs #204. Best score 58 bits
Score difference with first non-orthologous sequence - L.major:58 M.jannaschii:58

Q4QEX4              	100.00%		P54013              	100.00%
Q4Q2H9              	98.50%		
Bootstrap support for Q4QEX4 as seed ortholog is 100%.
Bootstrap support for P54013 as seed ortholog is 100%.

Group of orthologs #205. Best score 57 bits
Score difference with first non-orthologous sequence - L.major:57 M.jannaschii:57

E9ACT0              	100.00%		Q57649              	100.00%
Q4QG42              	15.57%		
Bootstrap support for E9ACT0 as seed ortholog is 100%.
Bootstrap support for Q57649 as seed ortholog is 100%.

Group of orthologs #206. Best score 57 bits
Score difference with first non-orthologous sequence - L.major:57 M.jannaschii:57

E9AD19              	100.00%		Q57849              	100.00%
Bootstrap support for E9AD19 as seed ortholog is 100%.
Bootstrap support for Q57849 as seed ortholog is 100%.

Group of orthologs #207. Best score 57 bits
Score difference with first non-orthologous sequence - L.major:57 M.jannaschii:57

Q4QE50              	100.00%		Q57573              	100.00%
Bootstrap support for Q4QE50 as seed ortholog is 100%.
Bootstrap support for Q57573 as seed ortholog is 100%.

Group of orthologs #208. Best score 56 bits
Score difference with first non-orthologous sequence - L.major:56 M.jannaschii:56

Q4Q1W0              	100.00%		Q57846              	100.00%
Bootstrap support for Q4Q1W0 as seed ortholog is 100%.
Bootstrap support for Q57846 as seed ortholog is 100%.

Group of orthologs #209. Best score 55 bits
Score difference with first non-orthologous sequence - L.major:2 M.jannaschii:55

Q4Q7N0              	100.00%		Q58377              	100.00%
Bootstrap support for Q4Q7N0 as seed ortholog is 45%.
Alternative seed ortholog is E9AFL5 (2 bits away from this cluster)
Bootstrap support for Q58377 as seed ortholog is 100%.

Group of orthologs #210. Best score 54 bits
Score difference with first non-orthologous sequence - L.major:7 M.jannaschii:54

Q6IMM3              	100.00%		Q58735              	100.00%
Q4Q5Y0              	73.02%		
Q9U0T6              	45.71%		
Q4QEJ1              	42.54%		
E9AEJ0              	29.84%		
Q9XZX2              	29.21%		
E9ADU4              	28.57%		
Q4Q0D7              	24.13%		
Q4Q756              	19.05%		
Q4QEM9              	16.19%		
Q4QJK0              	13.33%		
Q4Q1Z4              	6.98%		
Q4Q8X3              	6.67%		
Bootstrap support for Q6IMM3 as seed ortholog is 60%.
Alternative seed ortholog is Q9N2P5 (7 bits away from this cluster)
Bootstrap support for Q58735 as seed ortholog is 100%.

Group of orthologs #211. Best score 54 bits
Score difference with first non-orthologous sequence - L.major:54 M.jannaschii:54

E9AC20              	100.00%		Q58025              	100.00%
Bootstrap support for E9AC20 as seed ortholog is 100%.
Bootstrap support for Q58025 as seed ortholog is 100%.

Group of orthologs #212. Best score 54 bits
Score difference with first non-orthologous sequence - L.major:54 M.jannaschii:54

Q4QH67              	100.00%		Q58337              	100.00%
Bootstrap support for Q4QH67 as seed ortholog is 100%.
Bootstrap support for Q58337 as seed ortholog is 100%.

Group of orthologs #213. Best score 53 bits
Score difference with first non-orthologous sequence - L.major:1 M.jannaschii:53

Q4QD87              	100.00%		Q58237              	100.00%
Q4QD86              	21.07%		
Bootstrap support for Q4QD87 as seed ortholog is 47%.
Alternative seed ortholog is E9AEI4 (1 bits away from this cluster)
Bootstrap support for Q58237 as seed ortholog is 100%.

Group of orthologs #214. Best score 53 bits
Score difference with first non-orthologous sequence - L.major:53 M.jannaschii:53

Q4QD94              	100.00%		Q58716              	100.00%
Bootstrap support for Q4QD94 as seed ortholog is 100%.
Bootstrap support for Q58716 as seed ortholog is 100%.

Group of orthologs #215. Best score 51 bits
Score difference with first non-orthologous sequence - L.major:51 M.jannaschii:51

Q4QAB9              	100.00%		Q58941              	100.00%
Bootstrap support for Q4QAB9 as seed ortholog is 100%.
Bootstrap support for Q58941 as seed ortholog is 100%.

Group of orthologs #216. Best score 50 bits
Score difference with first non-orthologous sequence - L.major:50 M.jannaschii:50

Q4QD71              	100.00%		Q57930              	100.00%
Bootstrap support for Q4QD71 as seed ortholog is 100%.
Bootstrap support for Q57930 as seed ortholog is 100%.

Group of orthologs #217. Best score 50 bits
Score difference with first non-orthologous sequence - L.major:50 M.jannaschii:50

Q4QF06              	100.00%		Q57887              	100.00%
Bootstrap support for Q4QF06 as seed ortholog is 100%.
Bootstrap support for Q57887 as seed ortholog is 100%.

Group of orthologs #218. Best score 49 bits
Score difference with first non-orthologous sequence - L.major:49 M.jannaschii:49

Q4Q256              	100.00%		Q58619              	100.00%
                    	       		Q57964              	9.93%
Bootstrap support for Q4Q256 as seed ortholog is 100%.
Bootstrap support for Q58619 as seed ortholog is 100%.

Group of orthologs #219. Best score 48 bits
Score difference with first non-orthologous sequence - L.major:48 M.jannaschii:48

Q4QGV4              	100.00%		Q58977              	100.00%
E9AD77              	14.10%		
Bootstrap support for Q4QGV4 as seed ortholog is 100%.
Bootstrap support for Q58977 as seed ortholog is 100%.

Group of orthologs #220. Best score 47 bits
Score difference with first non-orthologous sequence - L.major:7 M.jannaschii:47

Q4QCE8              	100.00%		Q58298              	100.00%
                    	       		Q57744              	5.91%
Bootstrap support for Q4QCE8 as seed ortholog is 56%.
Alternative seed ortholog is Q4QGS1 (7 bits away from this cluster)
Bootstrap support for Q58298 as seed ortholog is 100%.

Group of orthologs #221. Best score 47 bits
Score difference with first non-orthologous sequence - L.major:47 M.jannaschii:47

E9ADI3              	100.00%		Q58414              	100.00%
Bootstrap support for E9ADI3 as seed ortholog is 100%.
Bootstrap support for Q58414 as seed ortholog is 100%.

Group of orthologs #222. Best score 47 bits
Score difference with first non-orthologous sequence - L.major:47 M.jannaschii:47

Q4Q817              	100.00%		P54110              	100.00%
Bootstrap support for Q4Q817 as seed ortholog is 100%.
Bootstrap support for P54110 as seed ortholog is 100%.

Group of orthologs #223. Best score 45 bits
Score difference with first non-orthologous sequence - L.major:45 M.jannaschii:45

Q4QAP8              	100.00%		Q58923              	100.00%
Bootstrap support for Q4QAP8 as seed ortholog is 100%.
Bootstrap support for Q58923 as seed ortholog is 100%.

Group of orthologs #224. Best score 45 bits
Score difference with first non-orthologous sequence - L.major:45 M.jannaschii:45

Q4QHL4              	100.00%		Q57741              	100.00%
Bootstrap support for Q4QHL4 as seed ortholog is 100%.
Bootstrap support for Q57741 as seed ortholog is 100%.

Group of orthologs #225. Best score 44 bits
Score difference with first non-orthologous sequence - L.major:44 M.jannaschii:44

Q4Q0M6              	100.00%		Q58523              	100.00%
                    	       		Q58648              	7.76%
Bootstrap support for Q4Q0M6 as seed ortholog is 100%.
Bootstrap support for Q58523 as seed ortholog is 100%.

Group of orthologs #226. Best score 44 bits
Score difference with first non-orthologous sequence - L.major:44 M.jannaschii:44

Q4Q140              	100.00%		P54028              	100.00%
Bootstrap support for Q4Q140 as seed ortholog is 100%.
Bootstrap support for P54028 as seed ortholog is 100%.

Group of orthologs #227. Best score 44 bits
Score difference with first non-orthologous sequence - L.major:44 M.jannaschii:44

E9AFY9              	100.00%		Q58877              	100.00%
Bootstrap support for E9AFY9 as seed ortholog is 100%.
Bootstrap support for Q58877 as seed ortholog is 100%.

Group of orthologs #228. Best score 42 bits
Score difference with first non-orthologous sequence - L.major:42 M.jannaschii:42

Q4QA94              	100.00%		Q58925              	100.00%
Bootstrap support for Q4QA94 as seed ortholog is 100%.
Bootstrap support for Q58925 as seed ortholog is 100%.

Group of orthologs #229. Best score 41 bits
Score difference with first non-orthologous sequence - L.major:41 M.jannaschii:41

Q4Q860              	100.00%		Q57832              	100.00%
Bootstrap support for Q4Q860 as seed ortholog is 100%.
Bootstrap support for Q57832 as seed ortholog is 100%.