###################################
435 groups of orthologs
742 in-paralogs from L.chalumnae
491 in-paralogs from Synechocystis.sp.
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 1035 bits
Score difference with first non-orthologous sequence - L.chalumnae:1035 Synechocystis.sp.:1035

H3AKC9              	100.00%		P74416              	100.00%
Bootstrap support for H3AKC9 as seed ortholog is 100%.
Bootstrap support for P74416 as seed ortholog is 100%.

Group of orthologs #2. Best score 888 bits
Score difference with first non-orthologous sequence - L.chalumnae:888 Synechocystis.sp.:888

H2ZUU5              	100.00%		Q55959              	100.00%
Bootstrap support for H2ZUU5 as seed ortholog is 100%.
Bootstrap support for Q55959 as seed ortholog is 100%.

Group of orthologs #3. Best score 772 bits
Score difference with first non-orthologous sequence - L.chalumnae:772 Synechocystis.sp.:772

H3AH65              	100.00%		Q55756              	100.00%
H3AU29              	28.32%		
Bootstrap support for H3AH65 as seed ortholog is 100%.
Bootstrap support for Q55756 as seed ortholog is 100%.

Group of orthologs #4. Best score 750 bits
Score difference with first non-orthologous sequence - L.chalumnae:433 Synechocystis.sp.:750

H3AXM1              	100.00%		P73505              	100.00%
Bootstrap support for H3AXM1 as seed ortholog is 100%.
Bootstrap support for P73505 as seed ortholog is 100%.

Group of orthologs #5. Best score 698 bits
Score difference with first non-orthologous sequence - L.chalumnae:698 Synechocystis.sp.:698

H3BGP1              	100.00%		P73511              	100.00%
H3B242              	16.79%		
Bootstrap support for H3BGP1 as seed ortholog is 100%.
Bootstrap support for P73511 as seed ortholog is 100%.

Group of orthologs #6. Best score 690 bits
Score difference with first non-orthologous sequence - L.chalumnae:690 Synechocystis.sp.:690

H3A922              	100.00%		P73274              	100.00%
Bootstrap support for H3A922 as seed ortholog is 100%.
Bootstrap support for P73274 as seed ortholog is 100%.

Group of orthologs #7. Best score 619 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 Synechocystis.sp.:619

H3BGI7              	100.00%		Q55404              	100.00%
Bootstrap support for H3BGI7 as seed ortholog is 91%.
Bootstrap support for Q55404 as seed ortholog is 100%.

Group of orthologs #8. Best score 608 bits
Score difference with first non-orthologous sequence - L.chalumnae:404 Synechocystis.sp.:469

H3AGD0              	100.00%		P74751              	100.00%
Bootstrap support for H3AGD0 as seed ortholog is 100%.
Bootstrap support for P74751 as seed ortholog is 100%.

Group of orthologs #9. Best score 600 bits
Score difference with first non-orthologous sequence - L.chalumnae:16 Synechocystis.sp.:600

H3AL07              	100.00%		P22358              	100.00%
                    	       		P73098              	26.54%
                    	       		Q55154              	12.16%
Bootstrap support for H3AL07 as seed ortholog is 61%.
Alternative seed ortholog is H3BFV4 (16 bits away from this cluster)
Bootstrap support for P22358 as seed ortholog is 100%.

Group of orthologs #10. Best score 579 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 Synechocystis.sp.:295

H3AWE2              	100.00%		P74228              	100.00%
                    	       		P28371              	14.12%
Bootstrap support for H3AWE2 as seed ortholog is 96%.
Bootstrap support for P74228 as seed ortholog is 100%.

Group of orthologs #11. Best score 577 bits
Score difference with first non-orthologous sequence - L.chalumnae:468 Synechocystis.sp.:577

H2ZRK0              	100.00%		P27179              	100.00%
Bootstrap support for H2ZRK0 as seed ortholog is 100%.
Bootstrap support for P27179 as seed ortholog is 100%.

Group of orthologs #12. Best score 519 bits
Score difference with first non-orthologous sequence - L.chalumnae:309 Synechocystis.sp.:519

H2ZWJ3              	100.00%		Q55522              	100.00%
H3B5X3              	26.49%		
Bootstrap support for H2ZWJ3 as seed ortholog is 100%.
Bootstrap support for Q55522 as seed ortholog is 100%.

Group of orthologs #13. Best score 518 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 Synechocystis.sp.:375

H3BDY4              	100.00%		Q59999              	100.00%
H3ANB8              	74.12%		
M3XI19              	70.73%		
H2ZU49              	63.67%		
Bootstrap support for H3BDY4 as seed ortholog is 96%.
Bootstrap support for Q59999 as seed ortholog is 100%.

Group of orthologs #14. Best score 514 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 Synechocystis.sp.:400

H3AHX2              	100.00%		P74062              	100.00%
H3AEX1              	33.49%		
Bootstrap support for H3AHX2 as seed ortholog is 99%.
Bootstrap support for P74062 as seed ortholog is 100%.

Group of orthologs #15. Best score 511 bits
Score difference with first non-orthologous sequence - L.chalumnae:511 Synechocystis.sp.:511

H3B9U9              	100.00%		Q55786              	100.00%
Bootstrap support for H3B9U9 as seed ortholog is 100%.
Bootstrap support for Q55786 as seed ortholog is 100%.

Group of orthologs #16. Best score 490 bits
Score difference with first non-orthologous sequence - L.chalumnae:377 Synechocystis.sp.:490

H3B646              	100.00%		P22034              	100.00%
                    	       		Q05972              	31.18%
Bootstrap support for H3B646 as seed ortholog is 100%.
Bootstrap support for P22034 as seed ortholog is 100%.

Group of orthologs #17. Best score 485 bits
Score difference with first non-orthologous sequence - L.chalumnae:485 Synechocystis.sp.:485

H3B800              	100.00%		Q55486              	100.00%
Bootstrap support for H3B800 as seed ortholog is 100%.
Bootstrap support for Q55486 as seed ortholog is 100%.

Group of orthologs #18. Best score 484 bits
Score difference with first non-orthologous sequence - L.chalumnae:288 Synechocystis.sp.:484

H3A782              	100.00%		P74423              	100.00%
Bootstrap support for H3A782 as seed ortholog is 100%.
Bootstrap support for P74423 as seed ortholog is 100%.

Group of orthologs #19. Best score 480 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 Synechocystis.sp.:480

H3ALL0              	100.00%		P74571              	100.00%
Bootstrap support for H3ALL0 as seed ortholog is 99%.
Bootstrap support for P74571 as seed ortholog is 100%.

Group of orthologs #20. Best score 472 bits
Score difference with first non-orthologous sequence - L.chalumnae:472 Synechocystis.sp.:472

H3AZU8              	100.00%		P52208              	100.00%
Bootstrap support for H3AZU8 as seed ortholog is 100%.
Bootstrap support for P52208 as seed ortholog is 100%.

Group of orthologs #21. Best score 469 bits
Score difference with first non-orthologous sequence - L.chalumnae:322 Synechocystis.sp.:469

H3ALT2              	100.00%		P26527              	100.00%
Bootstrap support for H3ALT2 as seed ortholog is 100%.
Bootstrap support for P26527 as seed ortholog is 100%.

Group of orthologs #22. Best score 462 bits
Score difference with first non-orthologous sequence - L.chalumnae:311 Synechocystis.sp.:462

H3AI71              	100.00%		P74227              	100.00%
Bootstrap support for H3AI71 as seed ortholog is 100%.
Bootstrap support for P74227 as seed ortholog is 100%.

Group of orthologs #23. Best score 460 bits
Score difference with first non-orthologous sequence - L.chalumnae:460 Synechocystis.sp.:460

H3AFD7              	100.00%		Q55674              	100.00%
Bootstrap support for H3AFD7 as seed ortholog is 100%.
Bootstrap support for Q55674 as seed ortholog is 100%.

Group of orthologs #24. Best score 453 bits
Score difference with first non-orthologous sequence - L.chalumnae:453 Synechocystis.sp.:453

H3B2Y2              	100.00%		P74208              	100.00%
Bootstrap support for H3B2Y2 as seed ortholog is 100%.
Bootstrap support for P74208 as seed ortholog is 100%.

Group of orthologs #25. Best score 449 bits
Score difference with first non-orthologous sequence - L.chalumnae:449 Synechocystis.sp.:215

H3AEC4              	100.00%		P73479              	100.00%
Bootstrap support for H3AEC4 as seed ortholog is 100%.
Bootstrap support for P73479 as seed ortholog is 100%.

Group of orthologs #26. Best score 449 bits
Score difference with first non-orthologous sequence - L.chalumnae:449 Synechocystis.sp.:449

H3BFE7              	100.00%		Q55160              	100.00%
Bootstrap support for H3BFE7 as seed ortholog is 100%.
Bootstrap support for Q55160 as seed ortholog is 100%.

Group of orthologs #27. Best score 446 bits
Score difference with first non-orthologous sequence - L.chalumnae:181 Synechocystis.sp.:446

H3A7G0              	100.00%		P73437              	100.00%
H3A9W0              	52.97%		P72991              	12.90%
                    	       		P73179              	9.42%
                    	       		Q55700              	9.42%
Bootstrap support for H3A7G0 as seed ortholog is 100%.
Bootstrap support for P73437 as seed ortholog is 100%.

Group of orthologs #28. Best score 437 bits
Score difference with first non-orthologous sequence - L.chalumnae:437 Synechocystis.sp.:437

H3AKX1              	100.00%		Q55929              	100.00%
H3A5X0              	27.11%		
Bootstrap support for H3AKX1 as seed ortholog is 100%.
Bootstrap support for Q55929 as seed ortholog is 100%.

Group of orthologs #29. Best score 429 bits
Score difference with first non-orthologous sequence - L.chalumnae:429 Synechocystis.sp.:429

O03167              	100.00%		Q06473              	100.00%
Bootstrap support for O03167 as seed ortholog is 100%.
Bootstrap support for Q06473 as seed ortholog is 100%.

Group of orthologs #30. Best score 417 bits
Score difference with first non-orthologous sequence - L.chalumnae:417 Synechocystis.sp.:417

H3ASD1              	100.00%		P72659              	100.00%
Bootstrap support for H3ASD1 as seed ortholog is 100%.
Bootstrap support for P72659 as seed ortholog is 100%.

Group of orthologs #31. Best score 415 bits
Score difference with first non-orthologous sequence - L.chalumnae:287 Synechocystis.sp.:415

H3AUY3              	100.00%		P73851              	100.00%
Bootstrap support for H3AUY3 as seed ortholog is 100%.
Bootstrap support for P73851 as seed ortholog is 100%.

Group of orthologs #32. Best score 408 bits
Score difference with first non-orthologous sequence - L.chalumnae:277 Synechocystis.sp.:408

H3B528              	100.00%		P77972              	100.00%
H3B7K3              	74.95%		
H2ZXR3              	49.01%		
Bootstrap support for H3B528 as seed ortholog is 100%.
Bootstrap support for P77972 as seed ortholog is 100%.

Group of orthologs #33. Best score 399 bits
Score difference with first non-orthologous sequence - L.chalumnae:399 Synechocystis.sp.:130

H3AST4              	100.00%		P49433              	100.00%
H3A702              	23.38%		
Bootstrap support for H3AST4 as seed ortholog is 100%.
Bootstrap support for P49433 as seed ortholog is 99%.

Group of orthologs #34. Best score 399 bits
Score difference with first non-orthologous sequence - L.chalumnae:256 Synechocystis.sp.:399

H3AEL6              	100.00%		P72689              	100.00%
Bootstrap support for H3AEL6 as seed ortholog is 100%.
Bootstrap support for P72689 as seed ortholog is 100%.

Group of orthologs #35. Best score 398 bits
Score difference with first non-orthologous sequence - L.chalumnae:237 Synechocystis.sp.:160

H3A9P8              	100.00%		P74512              	100.00%
H3AWQ6              	16.92%		P73241              	9.11%
Bootstrap support for H3A9P8 as seed ortholog is 100%.
Bootstrap support for P74512 as seed ortholog is 96%.

Group of orthologs #36. Best score 393 bits
Score difference with first non-orthologous sequence - L.chalumnae:294 Synechocystis.sp.:393

H3ACZ9              	100.00%		P73443              	100.00%
H3B9Q4              	50.40%		
Bootstrap support for H3ACZ9 as seed ortholog is 100%.
Bootstrap support for P73443 as seed ortholog is 100%.

Group of orthologs #37. Best score 386 bits
Score difference with first non-orthologous sequence - L.chalumnae:386 Synechocystis.sp.:386

H3A389              	100.00%		P72871              	100.00%
H3A8E3              	71.15%		
Bootstrap support for H3A389 as seed ortholog is 100%.
Bootstrap support for P72871 as seed ortholog is 100%.

Group of orthologs #38. Best score 386 bits
Score difference with first non-orthologous sequence - L.chalumnae:386 Synechocystis.sp.:386

H3BAM6              	100.00%		Q55528              	100.00%
Bootstrap support for H3BAM6 as seed ortholog is 100%.
Bootstrap support for Q55528 as seed ortholog is 100%.

Group of orthologs #39. Best score 379 bits
Score difference with first non-orthologous sequence - L.chalumnae:379 Synechocystis.sp.:250

H3AAR3              	100.00%		P73496              	100.00%
Bootstrap support for H3AAR3 as seed ortholog is 100%.
Bootstrap support for P73496 as seed ortholog is 100%.

Group of orthologs #40. Best score 373 bits
Score difference with first non-orthologous sequence - L.chalumnae:373 Synechocystis.sp.:373

H3ALQ1              	100.00%		Q55806              	100.00%
H3BH99              	72.39%		
H3AJS0              	36.01%		
Bootstrap support for H3ALQ1 as seed ortholog is 100%.
Bootstrap support for Q55806 as seed ortholog is 100%.

Group of orthologs #41. Best score 368 bits
Score difference with first non-orthologous sequence - L.chalumnae:368 Synechocystis.sp.:368

H3AXX8              	100.00%		P73619              	100.00%
Bootstrap support for H3AXX8 as seed ortholog is 100%.
Bootstrap support for P73619 as seed ortholog is 100%.

Group of orthologs #42. Best score 357 bits
Score difference with first non-orthologous sequence - L.chalumnae:357 Synechocystis.sp.:357

H3BG06              	100.00%		P72720              	100.00%
H3A6Q5              	61.35%		
H3B5P0              	59.50%		
Bootstrap support for H3BG06 as seed ortholog is 100%.
Bootstrap support for P72720 as seed ortholog is 100%.

Group of orthologs #43. Best score 357 bits
Score difference with first non-orthologous sequence - L.chalumnae:357 Synechocystis.sp.:300

H2ZVQ2              	100.00%		P73556              	100.00%
Bootstrap support for H2ZVQ2 as seed ortholog is 100%.
Bootstrap support for P73556 as seed ortholog is 100%.

Group of orthologs #44. Best score 354 bits
Score difference with first non-orthologous sequence - L.chalumnae:354 Synechocystis.sp.:354

H2ZYA8              	100.00%		P73290              	100.00%
H3BDJ1              	44.19%		
H3AR52              	37.39%		
Bootstrap support for H2ZYA8 as seed ortholog is 100%.
Bootstrap support for P73290 as seed ortholog is 100%.

Group of orthologs #45. Best score 352 bits
Score difference with first non-orthologous sequence - L.chalumnae:352 Synechocystis.sp.:352

H3AMH8              	100.00%		P74590              	100.00%
Bootstrap support for H3AMH8 as seed ortholog is 100%.
Bootstrap support for P74590 as seed ortholog is 100%.

Group of orthologs #46. Best score 352 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 Synechocystis.sp.:352

H3BBH3              	100.00%		P74260              	100.00%
Bootstrap support for H3BBH3 as seed ortholog is 88%.
Bootstrap support for P74260 as seed ortholog is 100%.

Group of orthologs #47. Best score 342 bits
Score difference with first non-orthologous sequence - L.chalumnae:342 Synechocystis.sp.:342

H3BII8              	100.00%		P77962              	100.00%
H3AND8              	28.26%		
Bootstrap support for H3BII8 as seed ortholog is 100%.
Bootstrap support for P77962 as seed ortholog is 100%.

Group of orthologs #48. Best score 337 bits
Score difference with first non-orthologous sequence - L.chalumnae:337 Synechocystis.sp.:337

H3AYK6              	100.00%		P74421              	100.00%
Bootstrap support for H3AYK6 as seed ortholog is 100%.
Bootstrap support for P74421 as seed ortholog is 100%.

Group of orthologs #49. Best score 336 bits
Score difference with first non-orthologous sequence - L.chalumnae:336 Synechocystis.sp.:336

H3BAA1              	100.00%		P72797              	100.00%
Bootstrap support for H3BAA1 as seed ortholog is 100%.
Bootstrap support for P72797 as seed ortholog is 100%.

Group of orthologs #50. Best score 330 bits
Score difference with first non-orthologous sequence - L.chalumnae:330 Synechocystis.sp.:330

H2ZXG4              	100.00%		P73283              	100.00%
Bootstrap support for H2ZXG4 as seed ortholog is 100%.
Bootstrap support for P73283 as seed ortholog is 100%.

Group of orthologs #51. Best score 330 bits
Score difference with first non-orthologous sequence - L.chalumnae:330 Synechocystis.sp.:330

H3BC16              	100.00%		Q55510              	100.00%
Bootstrap support for H3BC16 as seed ortholog is 100%.
Bootstrap support for Q55510 as seed ortholog is 100%.

Group of orthologs #52. Best score 325 bits
Score difference with first non-orthologous sequence - L.chalumnae:325 Synechocystis.sp.:325

H3BIH2              	100.00%		P74008              	100.00%
M3XHX9              	19.45%		
M3XH88              	19.31%		
Bootstrap support for H3BIH2 as seed ortholog is 100%.
Bootstrap support for P74008 as seed ortholog is 100%.

Group of orthologs #53. Best score 325 bits
Score difference with first non-orthologous sequence - L.chalumnae:204 Synechocystis.sp.:183

H3B7X9              	100.00%		P73558              	100.00%
Bootstrap support for H3B7X9 as seed ortholog is 100%.
Bootstrap support for P73558 as seed ortholog is 100%.

Group of orthologs #54. Best score 321 bits
Score difference with first non-orthologous sequence - L.chalumnae:321 Synechocystis.sp.:321

H3ASL2              	100.00%		P54902              	100.00%
Bootstrap support for H3ASL2 as seed ortholog is 100%.
Bootstrap support for P54902 as seed ortholog is 100%.

Group of orthologs #55. Best score 320 bits
Score difference with first non-orthologous sequence - L.chalumnae:320 Synechocystis.sp.:320

H3AIL3              	100.00%		P73089              	100.00%
H2ZZL6              	15.37%		
H3A4U8              	9.25%		
H3BE39              	7.53%		
H3AUU3              	6.09%		
H2ZT82              	5.65%		
H3ATN8              	5.45%		
H3A003              	5.38%		
Bootstrap support for H3AIL3 as seed ortholog is 100%.
Bootstrap support for P73089 as seed ortholog is 100%.

Group of orthologs #56. Best score 320 bits
Score difference with first non-orthologous sequence - L.chalumnae:320 Synechocystis.sp.:320

H3A587              	100.00%		Q55621              	100.00%
Bootstrap support for H3A587 as seed ortholog is 100%.
Bootstrap support for Q55621 as seed ortholog is 100%.

Group of orthologs #57. Best score 319 bits
Score difference with first non-orthologous sequence - L.chalumnae:319 Synechocystis.sp.:319

H3ATJ8              	100.00%		P73534              	100.00%
H3AAG4              	64.87%		Q55863              	7.48%
Bootstrap support for H3ATJ8 as seed ortholog is 100%.
Bootstrap support for P73534 as seed ortholog is 100%.

Group of orthologs #58. Best score 318 bits
Score difference with first non-orthologous sequence - L.chalumnae:318 Synechocystis.sp.:318

H3A550              	100.00%		P27724              	100.00%
Bootstrap support for H3A550 as seed ortholog is 100%.
Bootstrap support for P27724 as seed ortholog is 100%.

Group of orthologs #59. Best score 316 bits
Score difference with first non-orthologous sequence - L.chalumnae:316 Synechocystis.sp.:316

H3A4D6              	100.00%		P74741              	100.00%
Bootstrap support for H3A4D6 as seed ortholog is 100%.
Bootstrap support for P74741 as seed ortholog is 100%.

Group of orthologs #60. Best score 307 bits
Score difference with first non-orthologous sequence - L.chalumnae:307 Synechocystis.sp.:307

H3AFT5              	100.00%		P49057              	100.00%
Bootstrap support for H3AFT5 as seed ortholog is 100%.
Bootstrap support for P49057 as seed ortholog is 100%.

Group of orthologs #61. Best score 307 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 Synechocystis.sp.:307

H3AGE6              	100.00%		Q55729              	100.00%
Bootstrap support for H3AGE6 as seed ortholog is 99%.
Bootstrap support for Q55729 as seed ortholog is 100%.

Group of orthologs #62. Best score 306 bits
Score difference with first non-orthologous sequence - L.chalumnae:306 Synechocystis.sp.:306

M3XJT3              	100.00%		P73411              	100.00%
Bootstrap support for M3XJT3 as seed ortholog is 100%.
Bootstrap support for P73411 as seed ortholog is 100%.

Group of orthologs #63. Best score 300 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 Synechocystis.sp.:26

H3BEA5              	100.00%		P73533              	100.00%
H3B1R8              	25.10%		P73400              	5.67%
H3B2B9              	24.94%		
H3A5A8              	7.44%		
Bootstrap support for H3BEA5 as seed ortholog is 92%.
Bootstrap support for P73533 as seed ortholog is 72%.
Alternative seed ortholog is P73278 (26 bits away from this cluster)

Group of orthologs #64. Best score 300 bits
Score difference with first non-orthologous sequence - L.chalumnae:300 Synechocystis.sp.:300

H3A712              	100.00%		P73137              	100.00%
Bootstrap support for H3A712 as seed ortholog is 100%.
Bootstrap support for P73137 as seed ortholog is 100%.

Group of orthologs #65. Best score 298 bits
Score difference with first non-orthologous sequence - L.chalumnae:298 Synechocystis.sp.:298

H3AKY2              	100.00%		P74686              	100.00%
Bootstrap support for H3AKY2 as seed ortholog is 100%.
Bootstrap support for P74686 as seed ortholog is 100%.

Group of orthologs #66. Best score 294 bits
Score difference with first non-orthologous sequence - L.chalumnae:294 Synechocystis.sp.:294

H3A726              	100.00%		P73942              	100.00%
Bootstrap support for H3A726 as seed ortholog is 100%.
Bootstrap support for P73942 as seed ortholog is 100%.

Group of orthologs #67. Best score 291 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 Synechocystis.sp.:291

H2ZTZ0              	100.00%		Q55811              	100.00%
Bootstrap support for H2ZTZ0 as seed ortholog is 96%.
Bootstrap support for Q55811 as seed ortholog is 100%.

Group of orthologs #68. Best score 288 bits
Score difference with first non-orthologous sequence - L.chalumnae:288 Synechocystis.sp.:288

H3AD90              	100.00%		P74024              	100.00%
Bootstrap support for H3AD90 as seed ortholog is 100%.
Bootstrap support for P74024 as seed ortholog is 100%.

Group of orthologs #69. Best score 288 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 Synechocystis.sp.:288

H3B5L6              	100.00%		P73769              	100.00%
Bootstrap support for H3B5L6 as seed ortholog is 87%.
Bootstrap support for P73769 as seed ortholog is 100%.

Group of orthologs #70. Best score 287 bits
Score difference with first non-orthologous sequence - L.chalumnae:287 Synechocystis.sp.:287

H3BEB4              	100.00%		P77973              	100.00%
Bootstrap support for H3BEB4 as seed ortholog is 100%.
Bootstrap support for P77973 as seed ortholog is 100%.

Group of orthologs #71. Best score 285 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 Synechocystis.sp.:285

H3A5L2              	100.00%		Q55848              	100.00%
H2ZXJ6              	54.38%		
Bootstrap support for H3A5L2 as seed ortholog is 99%.
Bootstrap support for Q55848 as seed ortholog is 100%.

Group of orthologs #72. Best score 284 bits
Score difference with first non-orthologous sequence - L.chalumnae:169 Synechocystis.sp.:284

H3B5S0              	100.00%		Q59990              	100.00%
H3B7U5              	18.27%		
Bootstrap support for H3B5S0 as seed ortholog is 99%.
Bootstrap support for Q59990 as seed ortholog is 100%.

Group of orthologs #73. Best score 282 bits
Score difference with first non-orthologous sequence - L.chalumnae:282 Synechocystis.sp.:282

H3B819              	100.00%		P72848              	100.00%
Bootstrap support for H3B819 as seed ortholog is 100%.
Bootstrap support for P72848 as seed ortholog is 100%.

Group of orthologs #74. Best score 279 bits
Score difference with first non-orthologous sequence - L.chalumnae:279 Synechocystis.sp.:279

M3XI82              	100.00%		Q55694              	100.00%
Bootstrap support for M3XI82 as seed ortholog is 100%.
Bootstrap support for Q55694 as seed ortholog is 100%.

Group of orthologs #75. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 Synechocystis.sp.:29

H3BHP5              	100.00%		Q6ZEV8              	100.00%
Bootstrap support for H3BHP5 as seed ortholog is 99%.
Bootstrap support for Q6ZEV8 as seed ortholog is 79%.

Group of orthologs #76. Best score 275 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 Synechocystis.sp.:275

M3XI24              	100.00%		P73758              	100.00%
H3A7X9              	14.30%		P74317              	5.15%
H3A9D1              	12.45%		
Bootstrap support for M3XI24 as seed ortholog is 99%.
Bootstrap support for P73758 as seed ortholog is 100%.

Group of orthologs #77. Best score 273 bits
Score difference with first non-orthologous sequence - L.chalumnae:23 Synechocystis.sp.:273

H2ZRV2              	100.00%		Q55804              	100.00%
H3BEF1              	50.75%		
H3A1W8              	50.19%		
H3A6E9              	49.43%		
Bootstrap support for H2ZRV2 as seed ortholog is 74%.
Alternative seed ortholog is H3AGK3 (23 bits away from this cluster)
Bootstrap support for Q55804 as seed ortholog is 100%.

Group of orthologs #78. Best score 273 bits
Score difference with first non-orthologous sequence - L.chalumnae:273 Synechocystis.sp.:273

H3AEX7              	100.00%		P73886              	100.00%
Bootstrap support for H3AEX7 as seed ortholog is 100%.
Bootstrap support for P73886 as seed ortholog is 100%.

Group of orthologs #79. Best score 272 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 Synechocystis.sp.:155

H2ZWM6              	100.00%		P72622              	100.00%
Bootstrap support for H2ZWM6 as seed ortholog is 100%.
Bootstrap support for P72622 as seed ortholog is 100%.

Group of orthologs #80. Best score 271 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 Synechocystis.sp.:271

H3AP88              	100.00%		P73340              	100.00%
Bootstrap support for H3AP88 as seed ortholog is 99%.
Bootstrap support for P73340 as seed ortholog is 100%.

Group of orthologs #81. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 Synechocystis.sp.:270

H3AY00              	100.00%		P74308              	100.00%
H3AC26              	15.21%		
Bootstrap support for H3AY00 as seed ortholog is 99%.
Bootstrap support for P74308 as seed ortholog is 100%.

Group of orthologs #82. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:270 Synechocystis.sp.:270

H3A5H3              	100.00%		P74215              	100.00%
Bootstrap support for H3A5H3 as seed ortholog is 100%.
Bootstrap support for P74215 as seed ortholog is 100%.

Group of orthologs #83. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 Synechocystis.sp.:146

H3B6I7              	100.00%		P73133              	100.00%
Bootstrap support for H3B6I7 as seed ortholog is 99%.
Bootstrap support for P73133 as seed ortholog is 99%.

Group of orthologs #84. Best score 269 bits
Score difference with first non-orthologous sequence - L.chalumnae:192 Synechocystis.sp.:269

H3AHF7              	100.00%		P74344              	100.00%
Bootstrap support for H3AHF7 as seed ortholog is 99%.
Bootstrap support for P74344 as seed ortholog is 100%.

Group of orthologs #85. Best score 266 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 Synechocystis.sp.:266

H3AWF8              	100.00%		P73405              	100.00%
Bootstrap support for H3AWF8 as seed ortholog is 100%.
Bootstrap support for P73405 as seed ortholog is 100%.

Group of orthologs #86. Best score 265 bits
Score difference with first non-orthologous sequence - L.chalumnae:265 Synechocystis.sp.:265

H3AD65              	100.00%		P54386              	100.00%
Bootstrap support for H3AD65 as seed ortholog is 100%.
Bootstrap support for P54386 as seed ortholog is 100%.

Group of orthologs #87. Best score 265 bits
Score difference with first non-orthologous sequence - L.chalumnae:265 Synechocystis.sp.:265

H3ASK0              	100.00%		P74257              	100.00%
Bootstrap support for H3ASK0 as seed ortholog is 100%.
Bootstrap support for P74257 as seed ortholog is 100%.

Group of orthologs #88. Best score 261 bits
Score difference with first non-orthologous sequence - L.chalumnae:261 Synechocystis.sp.:261

H3AI30              	100.00%		P74240              	100.00%
Bootstrap support for H3AI30 as seed ortholog is 100%.
Bootstrap support for P74240 as seed ortholog is 100%.

Group of orthologs #89. Best score 260 bits
Score difference with first non-orthologous sequence - L.chalumnae:260 Synechocystis.sp.:260

O03174              	100.00%		Q55429              	100.00%
Bootstrap support for O03174 as seed ortholog is 100%.
Bootstrap support for Q55429 as seed ortholog is 100%.

Group of orthologs #90. Best score 258 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 Synechocystis.sp.:258

H3AXJ1              	100.00%		P74702              	100.00%
Bootstrap support for H3AXJ1 as seed ortholog is 60%.
Alternative seed ortholog is H2ZTU7 (73 bits away from this cluster)
Bootstrap support for P74702 as seed ortholog is 100%.

Group of orthologs #91. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:257 Synechocystis.sp.:257

H3AP34              	100.00%		P74324              	100.00%
H3AR60              	59.32%		
Bootstrap support for H3AP34 as seed ortholog is 100%.
Bootstrap support for P74324 as seed ortholog is 100%.

Group of orthologs #92. Best score 250 bits
Score difference with first non-orthologous sequence - L.chalumnae:250 Synechocystis.sp.:250

H3ABS4              	100.00%		P72980              	100.00%
Bootstrap support for H3ABS4 as seed ortholog is 100%.
Bootstrap support for P72980 as seed ortholog is 100%.

Group of orthologs #93. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 Synechocystis.sp.:90

H3AXJ9              	100.00%		P73127              	100.00%
Bootstrap support for H3AXJ9 as seed ortholog is 97%.
Bootstrap support for P73127 as seed ortholog is 97%.

Group of orthologs #94. Best score 247 bits
Score difference with first non-orthologous sequence - L.chalumnae:247 Synechocystis.sp.:247

H3A521              	100.00%		P72834              	100.00%
H3ACS4              	40.82%		
Bootstrap support for H3A521 as seed ortholog is 100%.
Bootstrap support for P72834 as seed ortholog is 100%.

Group of orthologs #95. Best score 246 bits
Score difference with first non-orthologous sequence - L.chalumnae:246 Synechocystis.sp.:246

H3AIF6              	100.00%		P74330              	100.00%
H3B5Y6              	8.37%		
Bootstrap support for H3AIF6 as seed ortholog is 100%.
Bootstrap support for P74330 as seed ortholog is 100%.

Group of orthologs #96. Best score 246 bits
Score difference with first non-orthologous sequence - L.chalumnae:246 Synechocystis.sp.:246

H3BAS9              	100.00%		P77969              	100.00%
Bootstrap support for H3BAS9 as seed ortholog is 100%.
Bootstrap support for P77969 as seed ortholog is 100%.

Group of orthologs #97. Best score 244 bits
Score difference with first non-orthologous sequence - L.chalumnae:29 Synechocystis.sp.:244

H2ZZA6              	100.00%		P73825              	100.00%
Bootstrap support for H2ZZA6 as seed ortholog is 79%.
Bootstrap support for P73825 as seed ortholog is 100%.

Group of orthologs #98. Best score 244 bits
Score difference with first non-orthologous sequence - L.chalumnae:244 Synechocystis.sp.:196

H3B664              	100.00%		Q55497              	100.00%
Bootstrap support for H3B664 as seed ortholog is 100%.
Bootstrap support for Q55497 as seed ortholog is 100%.

Group of orthologs #99. Best score 243 bits
Score difference with first non-orthologous sequence - L.chalumnae:243 Synechocystis.sp.:110

H3BEP0              	100.00%		P74214              	100.00%
Bootstrap support for H3BEP0 as seed ortholog is 100%.
Bootstrap support for P74214 as seed ortholog is 99%.

Group of orthologs #100. Best score 242 bits
Score difference with first non-orthologous sequence - L.chalumnae:242 Synechocystis.sp.:242

H3AQR4              	100.00%		Q55626              	100.00%
H2ZVQ9              	52.91%		
Bootstrap support for H3AQR4 as seed ortholog is 100%.
Bootstrap support for Q55626 as seed ortholog is 100%.

Group of orthologs #101. Best score 242 bits
Score difference with first non-orthologous sequence - L.chalumnae:242 Synechocystis.sp.:242

H3BIG8              	100.00%		Q55759              	100.00%
H3AR22              	25.39%		
Bootstrap support for H3BIG8 as seed ortholog is 100%.
Bootstrap support for Q55759 as seed ortholog is 100%.

Group of orthologs #102. Best score 241 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 Synechocystis.sp.:241

H3A410              	100.00%		Q6ZE69              	100.00%
H3AMU1              	8.46%		
H3B637              	8.10%		
Bootstrap support for H3A410 as seed ortholog is 82%.
Bootstrap support for Q6ZE69 as seed ortholog is 100%.

Group of orthologs #103. Best score 241 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 Synechocystis.sp.:241

M3XHS0              	100.00%		Q55629              	100.00%
H3AIH3              	49.28%		
Bootstrap support for M3XHS0 as seed ortholog is 99%.
Bootstrap support for Q55629 as seed ortholog is 100%.

Group of orthologs #104. Best score 239 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 Synechocystis.sp.:239

H3ADK8              	100.00%		P74497              	100.00%
Bootstrap support for H3ADK8 as seed ortholog is 100%.
Bootstrap support for P74497 as seed ortholog is 100%.

Group of orthologs #105. Best score 239 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 Synechocystis.sp.:239

H3B4N2              	100.00%		P73971              	100.00%
Bootstrap support for H3B4N2 as seed ortholog is 97%.
Bootstrap support for P73971 as seed ortholog is 100%.

Group of orthologs #106. Best score 237 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 Synechocystis.sp.:136

H3AEH1              	100.00%		P72580              	100.00%
Bootstrap support for H3AEH1 as seed ortholog is 99%.
Bootstrap support for P72580 as seed ortholog is 99%.

Group of orthologs #107. Best score 235 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 Synechocystis.sp.:184

H3A5P1              	100.00%		P74468              	100.00%
Bootstrap support for H3A5P1 as seed ortholog is 100%.
Bootstrap support for P74468 as seed ortholog is 99%.

Group of orthologs #108. Best score 235 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 Synechocystis.sp.:235

H3AHU6              	100.00%		Q55808              	100.00%
Bootstrap support for H3AHU6 as seed ortholog is 100%.
Bootstrap support for Q55808 as seed ortholog is 100%.

Group of orthologs #109. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 Synechocystis.sp.:232

H3B7A9              	100.00%		P74510              	100.00%
H3AQ82              	9.40%		
Bootstrap support for H3B7A9 as seed ortholog is 97%.
Bootstrap support for P74510 as seed ortholog is 100%.

Group of orthologs #110. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:39 Synechocystis.sp.:99

H3AQV2              	100.00%		P74707              	100.00%
Bootstrap support for H3AQV2 as seed ortholog is 90%.
Bootstrap support for P74707 as seed ortholog is 99%.

Group of orthologs #111. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 Synechocystis.sp.:7

H3ADZ0              	100.00%		P73410              	100.00%
Bootstrap support for H3ADZ0 as seed ortholog is 100%.
Bootstrap support for P73410 as seed ortholog is 44%.
Alternative seed ortholog is P72662 (7 bits away from this cluster)

Group of orthologs #112. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:16 Synechocystis.sp.:230

H3B2Z2              	100.00%		P73789              	100.00%
Bootstrap support for H3B2Z2 as seed ortholog is 75%.
Bootstrap support for P73789 as seed ortholog is 100%.

Group of orthologs #113. Best score 227 bits
Score difference with first non-orthologous sequence - L.chalumnae:227 Synechocystis.sp.:174

H3B890              	100.00%		P73348              	100.00%
Bootstrap support for H3B890 as seed ortholog is 100%.
Bootstrap support for P73348 as seed ortholog is 100%.

Group of orthologs #114. Best score 225 bits
Score difference with first non-orthologous sequence - L.chalumnae:225 Synechocystis.sp.:225

H2ZUH4              	100.00%		Q55778              	100.00%
Bootstrap support for H2ZUH4 as seed ortholog is 100%.
Bootstrap support for Q55778 as seed ortholog is 100%.

Group of orthologs #115. Best score 224 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 Synechocystis.sp.:224

H3B186              	100.00%		P73821              	100.00%
Bootstrap support for H3B186 as seed ortholog is 99%.
Bootstrap support for P73821 as seed ortholog is 100%.

Group of orthologs #116. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 Synechocystis.sp.:223

H3A561              	100.00%		Q55585              	100.00%
H3AEA3              	7.24%		
H3ATS6              	5.72%		
Bootstrap support for H3A561 as seed ortholog is 99%.
Bootstrap support for Q55585 as seed ortholog is 100%.

Group of orthologs #117. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:15 Synechocystis.sp.:223

H3A7R5              	100.00%		Q55774              	100.00%
H2ZUU1              	66.91%		
H3A6M8              	17.83%		
Bootstrap support for H3A7R5 as seed ortholog is 61%.
Alternative seed ortholog is H3BGR8 (15 bits away from this cluster)
Bootstrap support for Q55774 as seed ortholog is 100%.

Group of orthologs #118. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 Synechocystis.sp.:223

H3ARG3              	100.00%		P74490              	100.00%
Bootstrap support for H3ARG3 as seed ortholog is 99%.
Bootstrap support for P74490 as seed ortholog is 100%.

Group of orthologs #119. Best score 222 bits
Score difference with first non-orthologous sequence - L.chalumnae:222 Synechocystis.sp.:222

H3A0Y3              	100.00%		P77965              	100.00%
H3BBW8              	25.16%		
H3AM97              	8.40%		
Bootstrap support for H3A0Y3 as seed ortholog is 100%.
Bootstrap support for P77965 as seed ortholog is 100%.

Group of orthologs #120. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 Synechocystis.sp.:220

H3BGT1              	100.00%		P74252              	100.00%
H3B3W7              	38.26%		
H3B2N3              	34.05%		
H3AVC3              	24.66%		
H3A688              	17.61%		
Bootstrap support for H3BGT1 as seed ortholog is 98%.
Bootstrap support for P74252 as seed ortholog is 100%.

Group of orthologs #121. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:10 Synechocystis.sp.:220

M3XKG4              	100.00%		P15729              	100.00%
Bootstrap support for M3XKG4 as seed ortholog is 63%.
Alternative seed ortholog is H3AK82 (10 bits away from this cluster)
Bootstrap support for P15729 as seed ortholog is 100%.

Group of orthologs #122. Best score 219 bits
Score difference with first non-orthologous sequence - L.chalumnae:219 Synechocystis.sp.:83

H3AG32              	100.00%		Q59993              	100.00%
                    	       		P54416              	31.28%
Bootstrap support for H3AG32 as seed ortholog is 100%.
Bootstrap support for Q59993 as seed ortholog is 99%.

Group of orthologs #123. Best score 219 bits
Score difference with first non-orthologous sequence - L.chalumnae:27 Synechocystis.sp.:166

H3A6N9              	100.00%		P53383              	100.00%
Bootstrap support for H3A6N9 as seed ortholog is 74%.
Alternative seed ortholog is H3B108 (27 bits away from this cluster)
Bootstrap support for P53383 as seed ortholog is 100%.

Group of orthologs #124. Best score 219 bits
Score difference with first non-orthologous sequence - L.chalumnae:219 Synechocystis.sp.:153

H3B9L6              	100.00%		Q55132              	100.00%
Bootstrap support for H3B9L6 as seed ortholog is 100%.
Bootstrap support for Q55132 as seed ortholog is 99%.

Group of orthologs #125. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:13 Synechocystis.sp.:218

H3ATZ8              	100.00%		P73940              	100.00%
                    	       		P73354              	26.85%
                    	       		P72780              	19.46%
Bootstrap support for H3ATZ8 as seed ortholog is 83%.
Bootstrap support for P73940 as seed ortholog is 100%.

Group of orthologs #126. Best score 214 bits
Score difference with first non-orthologous sequence - L.chalumnae:30 Synechocystis.sp.:214

H3AJJ4              	100.00%		P73004              	100.00%
H3AAB0              	69.96%		
H3ARP6              	61.99%		
H3AXU8              	52.95%		
H3A4A6              	8.63%		
H3A108              	8.46%		
Bootstrap support for H3AJJ4 as seed ortholog is 71%.
Alternative seed ortholog is H3A9S1 (30 bits away from this cluster)
Bootstrap support for P73004 as seed ortholog is 100%.

Group of orthologs #127. Best score 213 bits
Score difference with first non-orthologous sequence - L.chalumnae:213 Synechocystis.sp.:213

H3A9T1              	100.00%		P72849              	100.00%
H3A601              	16.74%		P74133              	11.79%
Bootstrap support for H3A9T1 as seed ortholog is 100%.
Bootstrap support for P72849 as seed ortholog is 100%.

Group of orthologs #128. Best score 213 bits
Score difference with first non-orthologous sequence - L.chalumnae:213 Synechocystis.sp.:134

H3B406              	100.00%		Q55624              	100.00%
H2ZYG0              	12.13%		
Bootstrap support for H3B406 as seed ortholog is 100%.
Bootstrap support for Q55624 as seed ortholog is 100%.

Group of orthologs #129. Best score 209 bits
Score difference with first non-orthologous sequence - L.chalumnae:209 Synechocystis.sp.:209

H3AIC3              	100.00%		P74124              	100.00%
Bootstrap support for H3AIC3 as seed ortholog is 100%.
Bootstrap support for P74124 as seed ortholog is 100%.

Group of orthologs #130. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 Synechocystis.sp.:208

H3B9G0              	100.00%		P74552              	100.00%
H3BAQ9              	18.07%		
H3AEE1              	17.29%		
H3AHH7              	13.49%		
H3AHV5              	12.77%		
M3XHQ8              	6.02%		
Bootstrap support for H3B9G0 as seed ortholog is 100%.
Bootstrap support for P74552 as seed ortholog is 100%.

Group of orthologs #131. Best score 207 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 Synechocystis.sp.:41

H2ZYK7              	100.00%		P53579              	100.00%
                    	       		P53580              	41.04%
Bootstrap support for H2ZYK7 as seed ortholog is 100%.
Bootstrap support for P53579 as seed ortholog is 91%.

Group of orthologs #132. Best score 207 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 Synechocystis.sp.:207

H3A9M3              	100.00%		P73655              	100.00%
Bootstrap support for H3A9M3 as seed ortholog is 100%.
Bootstrap support for P73655 as seed ortholog is 100%.

Group of orthologs #133. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:20 Synechocystis.sp.:54

H3A6U6              	100.00%		Q55505              	100.00%
Bootstrap support for H3A6U6 as seed ortholog is 80%.
Bootstrap support for Q55505 as seed ortholog is 88%.

Group of orthologs #134. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:204 Synechocystis.sp.:204

H3BB85              	100.00%		P73436              	100.00%
Bootstrap support for H3BB85 as seed ortholog is 100%.
Bootstrap support for P73436 as seed ortholog is 100%.

Group of orthologs #135. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 Synechocystis.sp.:151

H3AUG7              	100.00%		P72903              	100.00%
Bootstrap support for H3AUG7 as seed ortholog is 99%.
Bootstrap support for P72903 as seed ortholog is 99%.

Group of orthologs #136. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:200 Synechocystis.sp.:110

H3A5I1              	100.00%		P72770              	100.00%
H3A6G7              	30.79%		
H3B3L2              	24.90%		
M3XJF0              	24.82%		
H3AX38              	23.64%		
H3AYL5              	22.94%		
H3A115              	21.05%		
H3BG44              	20.58%		
H3AN20              	15.24%		
Bootstrap support for H3A5I1 as seed ortholog is 100%.
Bootstrap support for P72770 as seed ortholog is 98%.

Group of orthologs #137. Best score 199 bits
Score difference with first non-orthologous sequence - L.chalumnae:199 Synechocystis.sp.:199

H3ARI0              	100.00%		P54224              	100.00%
Bootstrap support for H3ARI0 as seed ortholog is 100%.
Bootstrap support for P54224 as seed ortholog is 100%.

Group of orthologs #138. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 Synechocystis.sp.:193

O03847              	100.00%		P26522              	100.00%
Bootstrap support for O03847 as seed ortholog is 100%.
Bootstrap support for P26522 as seed ortholog is 100%.

Group of orthologs #139. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 Synechocystis.sp.:192

H3A1W6              	100.00%		P72933              	100.00%
Bootstrap support for H3A1W6 as seed ortholog is 99%.
Bootstrap support for P72933 as seed ortholog is 100%.

Group of orthologs #140. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:192 Synechocystis.sp.:192

H3B6A3              	100.00%		P54261              	100.00%
Bootstrap support for H3B6A3 as seed ortholog is 100%.
Bootstrap support for P54261 as seed ortholog is 100%.

Group of orthologs #141. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 Synechocystis.sp.:188

H3AA08              	100.00%		P74494              	100.00%
H3BEM9              	9.15%		
Bootstrap support for H3AA08 as seed ortholog is 99%.
Bootstrap support for P74494 as seed ortholog is 100%.

Group of orthologs #142. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:29 Synechocystis.sp.:188

H3AU64              	100.00%		P52276              	100.00%
Bootstrap support for H3AU64 as seed ortholog is 74%.
Alternative seed ortholog is H3BBS2 (29 bits away from this cluster)
Bootstrap support for P52276 as seed ortholog is 100%.

Group of orthologs #143. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 Synechocystis.sp.:188

H3BDW3              	100.00%		P73660              	100.00%
Bootstrap support for H3BDW3 as seed ortholog is 100%.
Bootstrap support for P73660 as seed ortholog is 100%.

Group of orthologs #144. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 Synechocystis.sp.:185

O03173              	100.00%		P32421              	100.00%
                    	       		P72823              	54.94%
                    	       		Q55464              	16.71%
                    	       		P73394              	13.41%
Bootstrap support for O03173 as seed ortholog is 100%.
Bootstrap support for P32421 as seed ortholog is 100%.

Group of orthologs #145. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:14 Synechocystis.sp.:185

H3AB13              	100.00%		P72931              	100.00%
Bootstrap support for H3AB13 as seed ortholog is 74%.
Alternative seed ortholog is H3B5X8 (14 bits away from this cluster)
Bootstrap support for P72931 as seed ortholog is 100%.

Group of orthologs #146. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 Synechocystis.sp.:185

H3ATQ9              	100.00%		P73421              	100.00%
Bootstrap support for H3ATQ9 as seed ortholog is 99%.
Bootstrap support for P73421 as seed ortholog is 100%.

Group of orthologs #147. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 Synechocystis.sp.:185

H3AQI2              	100.00%		Q55813              	100.00%
Bootstrap support for H3AQI2 as seed ortholog is 100%.
Bootstrap support for Q55813 as seed ortholog is 100%.

Group of orthologs #148. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 Synechocystis.sp.:183

H3A9S8              	100.00%		P73839              	100.00%
Bootstrap support for H3A9S8 as seed ortholog is 100%.
Bootstrap support for P73839 as seed ortholog is 100%.

Group of orthologs #149. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 Synechocystis.sp.:27

H3APP7              	100.00%		P73574              	100.00%
Bootstrap support for H3APP7 as seed ortholog is 93%.
Bootstrap support for P73574 as seed ortholog is 82%.

Group of orthologs #150. Best score 182 bits
Score difference with first non-orthologous sequence - L.chalumnae:25 Synechocystis.sp.:182

H3B3N8              	100.00%		P74770              	100.00%
H3B216              	68.89%		
Bootstrap support for H3B3N8 as seed ortholog is 72%.
Alternative seed ortholog is H3B343 (25 bits away from this cluster)
Bootstrap support for P74770 as seed ortholog is 100%.

Group of orthologs #151. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 Synechocystis.sp.:178

H3AEB3              	100.00%		P74211              	100.00%
Bootstrap support for H3AEB3 as seed ortholog is 100%.
Bootstrap support for P74211 as seed ortholog is 100%.

Group of orthologs #152. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 Synechocystis.sp.:178

H3B2Z7              	100.00%		P74034              	100.00%
Bootstrap support for H3B2Z7 as seed ortholog is 95%.
Bootstrap support for P74034 as seed ortholog is 100%.

Group of orthologs #153. Best score 177 bits
Score difference with first non-orthologous sequence - L.chalumnae:177 Synechocystis.sp.:177

H3AHZ5              	100.00%		Q55081              	100.00%
H3AQQ3              	66.58%		
H3BGM2              	42.95%		
H3AWN2              	31.65%		
Bootstrap support for H3AHZ5 as seed ortholog is 100%.
Bootstrap support for Q55081 as seed ortholog is 100%.

Group of orthologs #154. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:176 Synechocystis.sp.:176

H3B1F6              	100.00%		Q55709              	100.00%
H2ZV24              	74.08%		
H2ZTN3              	35.06%		
Bootstrap support for H3B1F6 as seed ortholog is 100%.
Bootstrap support for Q55709 as seed ortholog is 100%.

Group of orthologs #155. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 Synechocystis.sp.:175

M3XJM0              	100.00%		P54147              	100.00%
                    	       		P72935              	19.19%
                    	       		P54148              	11.68%
Bootstrap support for M3XJM0 as seed ortholog is 100%.
Bootstrap support for P54147 as seed ortholog is 100%.

Group of orthologs #156. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 Synechocystis.sp.:175

H3AP55              	100.00%		P52981              	100.00%
Bootstrap support for H3AP55 as seed ortholog is 100%.
Bootstrap support for P52981 as seed ortholog is 100%.

Group of orthologs #157. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 Synechocystis.sp.:175

H3BB46              	100.00%		P54225              	100.00%
Bootstrap support for H3BB46 as seed ortholog is 100%.
Bootstrap support for P54225 as seed ortholog is 100%.

Group of orthologs #158. Best score 174 bits
Score difference with first non-orthologous sequence - L.chalumnae:174 Synechocystis.sp.:21

H3A7L7              	100.00%		P80046              	100.00%
H3AFA1              	22.16%		
H3AHE6              	17.30%		
M3XIQ8              	16.94%		
Bootstrap support for H3A7L7 as seed ortholog is 100%.
Bootstrap support for P80046 as seed ortholog is 96%.

Group of orthologs #159. Best score 174 bits
Score difference with first non-orthologous sequence - L.chalumnae:5 Synechocystis.sp.:96

H3A2W5              	100.00%		Q55124              	100.00%
Bootstrap support for H3A2W5 as seed ortholog is 55%.
Alternative seed ortholog is H3A1S5 (5 bits away from this cluster)
Bootstrap support for Q55124 as seed ortholog is 99%.

Group of orthologs #160. Best score 174 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 Synechocystis.sp.:113

H3AHF4              	100.00%		P73688              	100.00%
Bootstrap support for H3AHF4 as seed ortholog is 99%.
Bootstrap support for P73688 as seed ortholog is 99%.

Group of orthologs #161. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 Synechocystis.sp.:173

H3A091              	100.00%		P73467              	100.00%
Bootstrap support for H3A091 as seed ortholog is 100%.
Bootstrap support for P73467 as seed ortholog is 100%.

Group of orthologs #162. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:37 Synechocystis.sp.:173

H3AGJ0              	100.00%		P55175              	100.00%
Bootstrap support for H3AGJ0 as seed ortholog is 85%.
Bootstrap support for P55175 as seed ortholog is 100%.

Group of orthologs #163. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 Synechocystis.sp.:173

H3AJE5              	100.00%		P74572              	100.00%
Bootstrap support for H3AJE5 as seed ortholog is 98%.
Bootstrap support for P74572 as seed ortholog is 100%.

Group of orthologs #164. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 Synechocystis.sp.:172

H3BGA2              	100.00%		P72835              	100.00%
Bootstrap support for H3BGA2 as seed ortholog is 100%.
Bootstrap support for P72835 as seed ortholog is 100%.

Group of orthologs #165. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 Synechocystis.sp.:87

H3AJC6              	100.00%		P74477              	100.00%
H3AZP4              	15.03%		
H3AH77              	6.44%		
M3XJQ9              	6.44%		
Bootstrap support for H3AJC6 as seed ortholog is 92%.
Bootstrap support for P74477 as seed ortholog is 97%.

Group of orthologs #166. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 Synechocystis.sp.:168

H3BAY6              	100.00%		Q55983              	100.00%
Bootstrap support for H3BAY6 as seed ortholog is 100%.
Bootstrap support for Q55983 as seed ortholog is 100%.

Group of orthologs #167. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 Synechocystis.sp.:167

H3A5R3              	100.00%		P74594              	100.00%
Bootstrap support for H3A5R3 as seed ortholog is 100%.
Bootstrap support for P74594 as seed ortholog is 100%.

Group of orthologs #168. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:14 Synechocystis.sp.:164

H3B1U2              	100.00%		Q6ZEN7              	100.00%
H3A9W6              	18.02%		
Bootstrap support for H3B1U2 as seed ortholog is 67%.
Alternative seed ortholog is H3AFB2 (14 bits away from this cluster)
Bootstrap support for Q6ZEN7 as seed ortholog is 100%.

Group of orthologs #169. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 Synechocystis.sp.:164

H3B105              	100.00%		P73755              	100.00%
Bootstrap support for H3B105 as seed ortholog is 100%.
Bootstrap support for P73755 as seed ortholog is 100%.

Group of orthologs #170. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:23 Synechocystis.sp.:163

H3AA15              	100.00%		P73637              	100.00%
Bootstrap support for H3AA15 as seed ortholog is 78%.
Bootstrap support for P73637 as seed ortholog is 100%.

Group of orthologs #171. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 Synechocystis.sp.:163

H3AXX3              	100.00%		P73965              	100.00%
Bootstrap support for H3AXX3 as seed ortholog is 100%.
Bootstrap support for P73965 as seed ortholog is 100%.

Group of orthologs #172. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 Synechocystis.sp.:80

H3B3Y2              	100.00%		P73245              	100.00%
Bootstrap support for H3B3Y2 as seed ortholog is 100%.
Bootstrap support for P73245 as seed ortholog is 98%.

Group of orthologs #173. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 Synechocystis.sp.:161

H3BE26              	100.00%		P74527              	100.00%
H3A174              	17.36%		
H3BG26              	17.18%		
H3A6R7              	16.19%		
H2ZW97              	15.95%		
H3B2T1              	14.90%		
H3A0D4              	13.73%		
H3B6T4              	10.47%		
Bootstrap support for H3BE26 as seed ortholog is 100%.
Bootstrap support for P74527 as seed ortholog is 100%.

Group of orthologs #174. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 Synechocystis.sp.:161

H3AJ85              	100.00%		Q55383              	100.00%
H3B830              	50.89%		
H3AQL4              	50.00%		
H3AN81              	18.57%		
Bootstrap support for H3AJ85 as seed ortholog is 96%.
Bootstrap support for Q55383 as seed ortholog is 100%.

Group of orthologs #175. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:25 Synechocystis.sp.:161

H3BDZ6              	100.00%		P73913              	100.00%
                    	       		P73918              	10.48%
Bootstrap support for H3BDZ6 as seed ortholog is 67%.
Alternative seed ortholog is H2ZRY4 (25 bits away from this cluster)
Bootstrap support for P73913 as seed ortholog is 100%.

Group of orthologs #176. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 Synechocystis.sp.:161

H3A886              	100.00%		Q55482              	100.00%
Bootstrap support for H3A886 as seed ortholog is 100%.
Bootstrap support for Q55482 as seed ortholog is 100%.

Group of orthologs #177. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 Synechocystis.sp.:161

M3XJ87              	100.00%		P73349              	100.00%
Bootstrap support for M3XJ87 as seed ortholog is 82%.
Bootstrap support for P73349 as seed ortholog is 100%.

Group of orthologs #178. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 Synechocystis.sp.:159

H3A3X5              	100.00%		P73211              	100.00%
H3A2G8              	37.01%		
H2ZT86              	11.23%		
Bootstrap support for H3A3X5 as seed ortholog is 100%.
Bootstrap support for P73211 as seed ortholog is 100%.

Group of orthologs #179. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 Synechocystis.sp.:23

M3XHU7              	100.00%		P73282              	100.00%
H3AYY5              	48.25%		
Bootstrap support for M3XHU7 as seed ortholog is 100%.
Bootstrap support for P73282 as seed ortholog is 61%.
Alternative seed ortholog is P73067 (23 bits away from this cluster)

Group of orthologs #180. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 Synechocystis.sp.:158

H3AWI1              	100.00%		Q55526              	100.00%
Bootstrap support for H3AWI1 as seed ortholog is 99%.
Bootstrap support for Q55526 as seed ortholog is 100%.

Group of orthologs #181. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 Synechocystis.sp.:70

H3BG15              	100.00%		P73270              	100.00%
Bootstrap support for H3BG15 as seed ortholog is 99%.
Bootstrap support for P73270 as seed ortholog is 97%.

Group of orthologs #182. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 Synechocystis.sp.:155

H3B7H7              	100.00%		P73481              	100.00%
H3AX93              	34.29%		
Bootstrap support for H3B7H7 as seed ortholog is 100%.
Bootstrap support for P73481 as seed ortholog is 100%.

Group of orthologs #183. Best score 154 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 Synechocystis.sp.:154

H3A661              	100.00%		Q55910              	100.00%
Bootstrap support for H3A661 as seed ortholog is 96%.
Bootstrap support for Q55910 as seed ortholog is 100%.

Group of orthologs #184. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 Synechocystis.sp.:153

H2ZYP3              	100.00%		P74301              	100.00%
Bootstrap support for H2ZYP3 as seed ortholog is 100%.
Bootstrap support for P74301 as seed ortholog is 100%.

Group of orthologs #185. Best score 152 bits
Score difference with first non-orthologous sequence - L.chalumnae:23 Synechocystis.sp.:152

H3A380              	100.00%		Q55956              	100.00%
H3BEL1              	59.41%		
H3AMB7              	10.02%		
H3B4U4              	9.84%		
H2ZVB0              	7.23%		
H3A5I8              	6.88%		
Bootstrap support for H3A380 as seed ortholog is 80%.
Bootstrap support for Q55956 as seed ortholog is 100%.

Group of orthologs #186. Best score 152 bits
Score difference with first non-orthologous sequence - L.chalumnae:152 Synechocystis.sp.:152

H3AQY9              	100.00%		P17062              	100.00%
                    	       		P19050              	46.82%
Bootstrap support for H3AQY9 as seed ortholog is 100%.
Bootstrap support for P17062 as seed ortholog is 100%.

Group of orthologs #187. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:12 Synechocystis.sp.:23

H3B0J0              	100.00%		P73990              	100.00%
H3BDK4              	80.46%		
Bootstrap support for H3B0J0 as seed ortholog is 62%.
Alternative seed ortholog is H2ZZ92 (12 bits away from this cluster)
Bootstrap support for P73990 as seed ortholog is 77%.

Group of orthologs #188. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 Synechocystis.sp.:151

H3AJ75              	100.00%		P73799              	100.00%
Bootstrap support for H3AJ75 as seed ortholog is 99%.
Bootstrap support for P73799 as seed ortholog is 100%.

Group of orthologs #189. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 Synechocystis.sp.:151

H3B6V8              	100.00%		P77968              	100.00%
Bootstrap support for H3B6V8 as seed ortholog is 100%.
Bootstrap support for P77968 as seed ortholog is 100%.

Group of orthologs #190. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 Synechocystis.sp.:150

H3BGA5              	100.00%		P73201              	100.00%
Bootstrap support for H3BGA5 as seed ortholog is 100%.
Bootstrap support for P73201 as seed ortholog is 100%.

Group of orthologs #191. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 Synechocystis.sp.:149

H3AP09              	100.00%		P73121              	100.00%
                    	       		Q55680              	36.31%
Bootstrap support for H3AP09 as seed ortholog is 93%.
Bootstrap support for P73121 as seed ortholog is 100%.

Group of orthologs #192. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:15 Synechocystis.sp.:148

H3AJ76              	100.00%		P73220              	100.00%
H2ZY13              	51.69%		
H2ZRX0              	17.72%		
Bootstrap support for H3AJ76 as seed ortholog is 60%.
Alternative seed ortholog is H3B2S8 (15 bits away from this cluster)
Bootstrap support for P73220 as seed ortholog is 100%.

Group of orthologs #193. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 Synechocystis.sp.:76

H3AMZ6              	100.00%		Q55128              	100.00%
H3B744              	49.75%		
Bootstrap support for H3AMZ6 as seed ortholog is 95%.
Bootstrap support for Q55128 as seed ortholog is 97%.

Group of orthologs #194. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:3 Synechocystis.sp.:148

H3BCE8              	100.00%		Q6ZEA1              	100.00%
Bootstrap support for H3BCE8 as seed ortholog is 51%.
Alternative seed ortholog is H3AX89 (3 bits away from this cluster)
Bootstrap support for Q6ZEA1 as seed ortholog is 100%.

Group of orthologs #195. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:10 Synechocystis.sp.:83

H2ZWY8              	100.00%		P73375              	100.00%
Bootstrap support for H2ZWY8 as seed ortholog is 63%.
Alternative seed ortholog is H2ZZ84 (10 bits away from this cluster)
Bootstrap support for P73375 as seed ortholog is 99%.

Group of orthologs #196. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:147 Synechocystis.sp.:147

H3ACH9              	100.00%		P74281              	100.00%
Bootstrap support for H3ACH9 as seed ortholog is 100%.
Bootstrap support for P74281 as seed ortholog is 100%.

Group of orthologs #197. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 Synechocystis.sp.:143

H3AS40              	100.00%		Q55500              	100.00%
Bootstrap support for H3AS40 as seed ortholog is 100%.
Bootstrap support for Q55500 as seed ortholog is 100%.

Group of orthologs #198. Best score 142 bits
Score difference with first non-orthologous sequence - L.chalumnae:142 Synechocystis.sp.:142

H3BHG9              	100.00%		P72958              	100.00%
H3ALB7              	37.37%		
H2ZWF5              	34.69%		
H3AN66              	33.86%		
H3ATI3              	29.60%		
Bootstrap support for H3BHG9 as seed ortholog is 100%.
Bootstrap support for P72958 as seed ortholog is 100%.

Group of orthologs #199. Best score 142 bits
Score difference with first non-orthologous sequence - L.chalumnae:142 Synechocystis.sp.:142

O03176              	100.00%		Q57038              	100.00%
Bootstrap support for O03176 as seed ortholog is 100%.
Bootstrap support for Q57038 as seed ortholog is 100%.

Group of orthologs #200. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 Synechocystis.sp.:141

H3BCZ3              	100.00%		P73863              	100.00%
H3BB52              	13.09%		P74393              	5.48%
H3AD58              	12.19%		
H3AQN2              	6.29%		
Bootstrap support for H3BCZ3 as seed ortholog is 100%.
Bootstrap support for P73863 as seed ortholog is 100%.

Group of orthologs #201. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:34 Synechocystis.sp.:141

H3ANH2              	100.00%		P72655              	100.00%
Bootstrap support for H3ANH2 as seed ortholog is 95%.
Bootstrap support for P72655 as seed ortholog is 100%.

Group of orthologs #202. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 Synechocystis.sp.:141

H3ALE6              	100.00%		P74756              	100.00%
Bootstrap support for H3ALE6 as seed ortholog is 100%.
Bootstrap support for P74756 as seed ortholog is 100%.

Group of orthologs #203. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 Synechocystis.sp.:140

H3AD82              	100.00%		P73460              	100.00%
Bootstrap support for H3AD82 as seed ortholog is 100%.
Bootstrap support for P73460 as seed ortholog is 100%.

Group of orthologs #204. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 Synechocystis.sp.:8

H3A703              	100.00%		P74285              	100.00%
H3AGB5              	12.37%		
Bootstrap support for H3A703 as seed ortholog is 100%.
Bootstrap support for P74285 as seed ortholog is 56%.
Alternative seed ortholog is Q55689 (8 bits away from this cluster)

Group of orthologs #205. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 Synechocystis.sp.:139

H3A1P6              	100.00%		P74519              	100.00%
Bootstrap support for H3A1P6 as seed ortholog is 100%.
Bootstrap support for P74519 as seed ortholog is 100%.

Group of orthologs #206. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 Synechocystis.sp.:137

H3B4K7              	100.00%		P74181              	100.00%
H3B382              	22.79%		
H3BID9              	12.57%		
Bootstrap support for H3B4K7 as seed ortholog is 100%.
Bootstrap support for P74181 as seed ortholog is 100%.

Group of orthologs #207. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 Synechocystis.sp.:136

H3AGU1              	100.00%		P74241              	100.00%
H2ZV63              	77.25%		
Bootstrap support for H3AGU1 as seed ortholog is 100%.
Bootstrap support for P74241 as seed ortholog is 100%.

Group of orthologs #208. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 Synechocystis.sp.:136

H2ZU31              	100.00%		P52983              	100.00%
Bootstrap support for H2ZU31 as seed ortholog is 100%.
Bootstrap support for P52983 as seed ortholog is 100%.

Group of orthologs #209. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 Synechocystis.sp.:136

H3A2G3              	100.00%		P74286              	100.00%
Bootstrap support for H3A2G3 as seed ortholog is 100%.
Bootstrap support for P74286 as seed ortholog is 100%.

Group of orthologs #210. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 Synechocystis.sp.:136

H3ACK3              	100.00%		Q55187              	100.00%
Bootstrap support for H3ACK3 as seed ortholog is 100%.
Bootstrap support for Q55187 as seed ortholog is 100%.

Group of orthologs #211. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 Synechocystis.sp.:135

H3AQ71              	100.00%		P73914              	100.00%
Bootstrap support for H3AQ71 as seed ortholog is 100%.
Bootstrap support for P73914 as seed ortholog is 100%.

Group of orthologs #212. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 Synechocystis.sp.:134

H3B8R6              	100.00%		P73723              	100.00%
Bootstrap support for H3B8R6 as seed ortholog is 100%.
Bootstrap support for P73723 as seed ortholog is 100%.

Group of orthologs #213. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 Synechocystis.sp.:133

H3BC11              	100.00%		P73842              	100.00%
Bootstrap support for H3BC11 as seed ortholog is 100%.
Bootstrap support for P73842 as seed ortholog is 100%.

Group of orthologs #214. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 Synechocystis.sp.:133

H3BI66              	100.00%		Q59977              	100.00%
Bootstrap support for H3BI66 as seed ortholog is 100%.
Bootstrap support for Q59977 as seed ortholog is 100%.

Group of orthologs #215. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 Synechocystis.sp.:132

H3A0F4              	100.00%		P74061              	100.00%
Bootstrap support for H3A0F4 as seed ortholog is 100%.
Bootstrap support for P74061 as seed ortholog is 100%.

Group of orthologs #216. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 Synechocystis.sp.:132

H3ARW6              	100.00%		P72648              	100.00%
Bootstrap support for H3ARW6 as seed ortholog is 99%.
Bootstrap support for P72648 as seed ortholog is 100%.

Group of orthologs #217. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 Synechocystis.sp.:131

H3BG82              	100.00%		Q55406              	100.00%
H2ZYT6              	49.32%		
Bootstrap support for H3BG82 as seed ortholog is 100%.
Bootstrap support for Q55406 as seed ortholog is 100%.

Group of orthologs #218. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 Synechocystis.sp.:131

H2ZWD9              	100.00%		P74383              	100.00%
Bootstrap support for H2ZWD9 as seed ortholog is 98%.
Bootstrap support for P74383 as seed ortholog is 100%.

Group of orthologs #219. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:12 Synechocystis.sp.:131

H3AVE3              	100.00%		P72606              	100.00%
Bootstrap support for H3AVE3 as seed ortholog is 62%.
Alternative seed ortholog is H3A0Z1 (12 bits away from this cluster)
Bootstrap support for P72606 as seed ortholog is 100%.

Group of orthologs #220. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 Synechocystis.sp.:130

H3AKB8              	100.00%		P73810              	100.00%
H3B0D1              	11.42%		
Bootstrap support for H3AKB8 as seed ortholog is 100%.
Bootstrap support for P73810 as seed ortholog is 100%.

Group of orthologs #221. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:35 Synechocystis.sp.:130

H3AYJ6              	100.00%		P74168              	100.00%
H3ASY7              	22.49%		
Bootstrap support for H3AYJ6 as seed ortholog is 74%.
Alternative seed ortholog is H3B654 (35 bits away from this cluster)
Bootstrap support for P74168 as seed ortholog is 100%.

Group of orthologs #222. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 Synechocystis.sp.:129

H3B2E8              	100.00%		P72779              	100.00%
Bootstrap support for H3B2E8 as seed ortholog is 100%.
Bootstrap support for P72779 as seed ortholog is 100%.

Group of orthologs #223. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:13 Synechocystis.sp.:128

H3AQY3              	100.00%		Q55702              	100.00%
Bootstrap support for H3AQY3 as seed ortholog is 65%.
Alternative seed ortholog is H3A4B7 (13 bits away from this cluster)
Bootstrap support for Q55702 as seed ortholog is 100%.

Group of orthologs #224. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:15 Synechocystis.sp.:127

H3B6J5              	100.00%		P72740              	100.00%
H3BAF3              	32.47%		P73059              	7.69%
M3XHB1              	19.41%		
Bootstrap support for H3B6J5 as seed ortholog is 59%.
Alternative seed ortholog is H3AEP4 (15 bits away from this cluster)
Bootstrap support for P72740 as seed ortholog is 100%.

Group of orthologs #225. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 Synechocystis.sp.:127

H3ALM4              	100.00%		P72778              	100.00%
H3B0L0              	13.65%		
Bootstrap support for H3ALM4 as seed ortholog is 100%.
Bootstrap support for P72778 as seed ortholog is 100%.

Group of orthologs #226. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 Synechocystis.sp.:127

H3B4S8              	100.00%		P74696              	100.00%
Bootstrap support for H3B4S8 as seed ortholog is 84%.
Bootstrap support for P74696 as seed ortholog is 100%.

Group of orthologs #227. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:13 Synechocystis.sp.:126

H3APW6              	100.00%		P74250              	100.00%
H3AYK9              	32.26%		P73824              	13.00%
Bootstrap support for H3APW6 as seed ortholog is 69%.
Alternative seed ortholog is H3B037 (13 bits away from this cluster)
Bootstrap support for P74250 as seed ortholog is 100%.

Group of orthologs #228. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 Synechocystis.sp.:48

H2ZXJ7              	100.00%		Q59987              	100.00%
H3B270              	53.70%		
H3BEA6              	42.61%		
H3AJ74              	40.27%		
H3A5P5              	36.77%		
H3AXM0              	29.57%		
H2ZSJ0              	18.29%		
M3XI98              	10.12%		
I6L4Q1              	5.45%		
Bootstrap support for H2ZXJ7 as seed ortholog is 94%.
Bootstrap support for Q59987 as seed ortholog is 92%.

Group of orthologs #229. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:29 Synechocystis.sp.:125

H3B1P2              	100.00%		P72763              	100.00%
H3AX77              	75.29%		
H3BI62              	64.00%		
H3A0X6              	9.42%		
I6L4N1              	8.09%		
H3A581              	6.67%		
H2ZZG0              	6.31%		
H3B7Y6              	6.04%		
Bootstrap support for H3B1P2 as seed ortholog is 78%.
Bootstrap support for P72763 as seed ortholog is 100%.

Group of orthologs #230. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 Synechocystis.sp.:125

H2ZRZ6              	100.00%		P74334              	100.00%
H3B9C0              	30.41%		P74370              	14.46%
H2ZXX9              	28.56%		
Bootstrap support for H2ZRZ6 as seed ortholog is 100%.
Bootstrap support for P74334 as seed ortholog is 100%.

Group of orthologs #231. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 Synechocystis.sp.:125

H3AAT0              	100.00%		P72945              	100.00%
H3BIE5              	25.02%		
Bootstrap support for H3AAT0 as seed ortholog is 100%.
Bootstrap support for P72945 as seed ortholog is 100%.

Group of orthologs #232. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:32 Synechocystis.sp.:124

H2ZV14              	100.00%		P72585              	100.00%
Bootstrap support for H2ZV14 as seed ortholog is 81%.
Bootstrap support for P72585 as seed ortholog is 100%.

Group of orthologs #233. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 Synechocystis.sp.:124

H3AAV8              	100.00%		Q59994              	100.00%
Bootstrap support for H3AAV8 as seed ortholog is 100%.
Bootstrap support for Q59994 as seed ortholog is 100%.

Group of orthologs #234. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 Synechocystis.sp.:123

H2ZUE9              	100.00%		P74046              	100.00%
Bootstrap support for H2ZUE9 as seed ortholog is 100%.
Bootstrap support for P74046 as seed ortholog is 100%.

Group of orthologs #235. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 Synechocystis.sp.:123

H3AXQ5              	100.00%		P73701              	100.00%
Bootstrap support for H3AXQ5 as seed ortholog is 100%.
Bootstrap support for P73701 as seed ortholog is 100%.

Group of orthologs #236. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 Synechocystis.sp.:122

H2ZWC2              	100.00%		Q55515              	100.00%
Bootstrap support for H2ZWC2 as seed ortholog is 100%.
Bootstrap support for Q55515 as seed ortholog is 100%.

Group of orthologs #237. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 Synechocystis.sp.:122

H3B1G7              	100.00%		P74040              	100.00%
Bootstrap support for H3B1G7 as seed ortholog is 100%.
Bootstrap support for P74040 as seed ortholog is 100%.

Group of orthologs #238. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:30 Synechocystis.sp.:121

H3BF11              	100.00%		P73809              	100.00%
H3BF34              	61.95%		
H3BIC8              	47.33%		
H3BBE0              	25.52%		
H3ADX5              	21.35%		
H3AEK5              	19.26%		
Bootstrap support for H3BF11 as seed ortholog is 80%.
Bootstrap support for P73809 as seed ortholog is 100%.

Group of orthologs #239. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 Synechocystis.sp.:121

H3AVF5              	100.00%		P73056              	100.00%
Bootstrap support for H3AVF5 as seed ortholog is 100%.
Bootstrap support for P73056 as seed ortholog is 100%.

Group of orthologs #240. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 Synechocystis.sp.:121

H3BC87              	100.00%		P73855              	100.00%
Bootstrap support for H3BC87 as seed ortholog is 100%.
Bootstrap support for P73855 as seed ortholog is 100%.

Group of orthologs #241. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 Synechocystis.sp.:121

H3BEJ6              	100.00%		Q79EF2              	100.00%
Bootstrap support for H3BEJ6 as seed ortholog is 100%.
Bootstrap support for Q79EF2 as seed ortholog is 100%.

Group of orthologs #242. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 Synechocystis.sp.:120

H3AUZ5              	100.00%		P54384              	100.00%
Bootstrap support for H3AUZ5 as seed ortholog is 85%.
Bootstrap support for P54384 as seed ortholog is 100%.

Group of orthologs #243. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 Synechocystis.sp.:72

H3AKK7              	100.00%		P74158              	100.00%
H2ZXZ2              	21.72%		
Bootstrap support for H3AKK7 as seed ortholog is 100%.
Bootstrap support for P74158 as seed ortholog is 99%.

Group of orthologs #244. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 Synechocystis.sp.:119

H2ZYQ9              	100.00%		P74384              	100.00%
Bootstrap support for H2ZYQ9 as seed ortholog is 100%.
Bootstrap support for P74384 as seed ortholog is 100%.

Group of orthologs #245. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 Synechocystis.sp.:118

H3B2M0              	100.00%		Q55157              	100.00%
H3B760              	30.96%		
Bootstrap support for H3B2M0 as seed ortholog is 100%.
Bootstrap support for Q55157 as seed ortholog is 100%.

Group of orthologs #246. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 Synechocystis.sp.:117

H3A1H5              	100.00%		P73594              	100.00%
M3XL86              	50.75%		P73595              	18.13%
Bootstrap support for H3A1H5 as seed ortholog is 90%.
Bootstrap support for P73594 as seed ortholog is 100%.

Group of orthologs #247. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:30 Synechocystis.sp.:117

H3A6P1              	100.00%		P73495              	100.00%
H2ZZE7              	5.07%		
Bootstrap support for H3A6P1 as seed ortholog is 83%.
Bootstrap support for P73495 as seed ortholog is 100%.

Group of orthologs #248. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:15 Synechocystis.sp.:116

H3AVE6              	100.00%		Q55884              	100.00%
                    	       		P73627              	27.45%
                    	       		P73577              	5.05%
Bootstrap support for H3AVE6 as seed ortholog is 65%.
Alternative seed ortholog is H3AEE9 (15 bits away from this cluster)
Bootstrap support for Q55884 as seed ortholog is 100%.

Group of orthologs #249. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 Synechocystis.sp.:116

H3AW97              	100.00%		P52761              	100.00%
Bootstrap support for H3AW97 as seed ortholog is 100%.
Bootstrap support for P52761 as seed ortholog is 100%.

Group of orthologs #250. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 Synechocystis.sp.:56

H3A1D0              	100.00%		Q6ZEP4              	100.00%
Bootstrap support for H3A1D0 as seed ortholog is 100%.
Bootstrap support for Q6ZEP4 as seed ortholog is 92%.

Group of orthologs #251. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 Synechocystis.sp.:115

O03170              	100.00%		Q06475              	100.00%
Bootstrap support for O03170 as seed ortholog is 100%.
Bootstrap support for Q06475 as seed ortholog is 100%.

Group of orthologs #252. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:5 Synechocystis.sp.:114

M3XK55              	100.00%		P73302              	100.00%
H3A640              	7.19%		P72641              	8.95%
Bootstrap support for M3XK55 as seed ortholog is 57%.
Alternative seed ortholog is H3BB97 (5 bits away from this cluster)
Bootstrap support for P73302 as seed ortholog is 100%.

Group of orthologs #253. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 Synechocystis.sp.:114

H3A423              	100.00%		P73853              	100.00%
H3AIE0              	61.90%		
Bootstrap support for H3A423 as seed ortholog is 100%.
Bootstrap support for P73853 as seed ortholog is 100%.

Group of orthologs #254. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 Synechocystis.sp.:114

H3ALI4              	100.00%		P73319              	100.00%
Bootstrap support for H3ALI4 as seed ortholog is 100%.
Bootstrap support for P73319 as seed ortholog is 100%.

Group of orthologs #255. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 Synechocystis.sp.:113

H2ZU10              	100.00%		P73935              	100.00%
Bootstrap support for H2ZU10 as seed ortholog is 97%.
Bootstrap support for P73935 as seed ortholog is 100%.

Group of orthologs #256. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:19 Synechocystis.sp.:113

H3B5L5              	100.00%		P74598              	100.00%
Bootstrap support for H3B5L5 as seed ortholog is 69%.
Alternative seed ortholog is H3A7T6 (19 bits away from this cluster)
Bootstrap support for P74598 as seed ortholog is 100%.

Group of orthologs #257. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:26 Synechocystis.sp.:111

H3AH37              	100.00%		P74745              	100.00%
H3AJ82              	30.38%		
M3XGW1              	11.13%		
H3ATX2              	10.51%		
Bootstrap support for H3AH37 as seed ortholog is 34%.
Alternative seed ortholog is H3B5X6 (26 bits away from this cluster)
Bootstrap support for P74745 as seed ortholog is 100%.

Group of orthologs #258. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 Synechocystis.sp.:111

H3BHY0              	100.00%		P72841              	100.00%
H3AJ70              	29.93%		
Bootstrap support for H3BHY0 as seed ortholog is 100%.
Bootstrap support for P72841 as seed ortholog is 100%.

Group of orthologs #259. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 Synechocystis.sp.:111

H2ZWB9              	100.00%		P72966              	100.00%
Bootstrap support for H2ZWB9 as seed ortholog is 100%.
Bootstrap support for P72966 as seed ortholog is 100%.

Group of orthologs #260. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:12 Synechocystis.sp.:111

H2ZVU4              	100.00%		P73902              	100.00%
Bootstrap support for H2ZVU4 as seed ortholog is 60%.
Alternative seed ortholog is H3A5M5 (12 bits away from this cluster)
Bootstrap support for P73902 as seed ortholog is 100%.

Group of orthologs #261. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 Synechocystis.sp.:110

H3B607              	100.00%		Q55810              	100.00%
Bootstrap support for H3B607 as seed ortholog is 100%.
Bootstrap support for Q55810 as seed ortholog is 100%.

Group of orthologs #262. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 Synechocystis.sp.:110

H3BFQ5              	100.00%		P72818              	100.00%
Bootstrap support for H3BFQ5 as seed ortholog is 100%.
Bootstrap support for P72818 as seed ortholog is 100%.

Group of orthologs #263. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 Synechocystis.sp.:108

H3BGV0              	100.00%		P73334              	100.00%
H3AVP5              	21.15%		
H3A1U0              	6.69%		
Bootstrap support for H3BGV0 as seed ortholog is 100%.
Bootstrap support for P73334 as seed ortholog is 100%.

Group of orthologs #264. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 Synechocystis.sp.:108

H3ART8              	100.00%		P73037              	100.00%
M3XKI1              	9.57%		
Bootstrap support for H3ART8 as seed ortholog is 100%.
Bootstrap support for P73037 as seed ortholog is 100%.

Group of orthologs #265. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 Synechocystis.sp.:108

H3BDC6              	100.00%		P73374              	100.00%
H3B9R3              	18.54%		
Bootstrap support for H3BDC6 as seed ortholog is 100%.
Bootstrap support for P73374 as seed ortholog is 100%.

Group of orthologs #266. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 Synechocystis.sp.:108

H3AJT2              	100.00%		P17253              	100.00%
Bootstrap support for H3AJT2 as seed ortholog is 100%.
Bootstrap support for P17253 as seed ortholog is 100%.

Group of orthologs #267. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 Synechocystis.sp.:29

H3AP13              	100.00%		P74336              	100.00%
Bootstrap support for H3AP13 as seed ortholog is 100%.
Bootstrap support for P74336 as seed ortholog is 82%.

Group of orthologs #268. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 Synechocystis.sp.:108

H3AVX1              	100.00%		P74514              	100.00%
Bootstrap support for H3AVX1 as seed ortholog is 100%.
Bootstrap support for P74514 as seed ortholog is 100%.

Group of orthologs #269. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:21 Synechocystis.sp.:108

H3B6G4              	100.00%		P73317              	100.00%
Bootstrap support for H3B6G4 as seed ortholog is 76%.
Bootstrap support for P73317 as seed ortholog is 100%.

Group of orthologs #270. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:34 Synechocystis.sp.:107

H3AFM8              	100.00%		P73298              	100.00%
Bootstrap support for H3AFM8 as seed ortholog is 96%.
Bootstrap support for P73298 as seed ortholog is 100%.

Group of orthologs #271. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 Synechocystis.sp.:107

H3BAV5              	100.00%		Q59989              	100.00%
Bootstrap support for H3BAV5 as seed ortholog is 100%.
Bootstrap support for Q59989 as seed ortholog is 100%.

Group of orthologs #272. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:27 Synechocystis.sp.:106

H3A7S0              	100.00%		Q9FAB3              	100.00%
H3AY24              	10.92%		
H3B9Z2              	8.73%		
H3A142              	8.59%		
H3ACF3              	8.30%		
H3A9Z1              	8.15%		
H3A4N4              	7.57%		
H3A0Q8              	6.84%		
Bootstrap support for H3A7S0 as seed ortholog is 75%.
Bootstrap support for Q9FAB3 as seed ortholog is 100%.

Group of orthologs #273. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 Synechocystis.sp.:106

H3AR31              	100.00%		P74442              	100.00%
H3AL06              	73.96%		
Bootstrap support for H3AR31 as seed ortholog is 100%.
Bootstrap support for P74442 as seed ortholog is 100%.

Group of orthologs #274. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 Synechocystis.sp.:106

H3BIP8              	100.00%		P74430              	100.00%
H3B6I8              	35.63%		
Bootstrap support for H3BIP8 as seed ortholog is 100%.
Bootstrap support for P74430 as seed ortholog is 100%.

Group of orthologs #275. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 Synechocystis.sp.:106

H2ZYK6              	100.00%		Q55595              	100.00%
Bootstrap support for H2ZYK6 as seed ortholog is 98%.
Bootstrap support for Q55595 as seed ortholog is 100%.

Group of orthologs #276. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 Synechocystis.sp.:106

H3AHH1              	100.00%		P74618              	100.00%
Bootstrap support for H3AHH1 as seed ortholog is 96%.
Bootstrap support for P74618 as seed ortholog is 100%.

Group of orthologs #277. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 Synechocystis.sp.:105

H3ALN3              	100.00%		P72927              	100.00%
H3AZX5              	33.91%		
Bootstrap support for H3ALN3 as seed ortholog is 100%.
Bootstrap support for P72927 as seed ortholog is 100%.

Group of orthologs #278. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:26 Synechocystis.sp.:105

H3ANG5              	100.00%		P73938              	100.00%
Bootstrap support for H3ANG5 as seed ortholog is 82%.
Bootstrap support for P73938 as seed ortholog is 100%.

Group of orthologs #279. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 Synechocystis.sp.:104

H3B534              	100.00%		Q6ZEQ2              	100.00%
H3AB30              	64.91%		
H3B452              	60.95%		
H3BBD9              	50.13%		
H3BGW3              	43.01%		
H3AKZ6              	41.16%		
H3A9C1              	38.13%		
H3A9F6              	37.73%		
H3B0E1              	37.20%		
M3XLP7              	36.41%		
H3A056              	36.15%		
H3BC47              	34.17%		
H3BAR9              	33.91%		
H3ADF4              	33.91%		
H3BB39              	27.44%		
H3A398              	23.75%		
H3B1J1              	23.48%		
H3B180              	22.43%		
H2ZYX1              	21.77%		
H2ZVU9              	9.50%		
Bootstrap support for H3B534 as seed ortholog is 100%.
Bootstrap support for Q6ZEQ2 as seed ortholog is 100%.

Group of orthologs #280. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 Synechocystis.sp.:33

H3AB41              	100.00%		P72754              	100.00%
H3AV80              	36.93%		
H2ZSN5              	35.73%		
Bootstrap support for H3AB41 as seed ortholog is 100%.
Bootstrap support for P72754 as seed ortholog is 87%.

Group of orthologs #281. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 Synechocystis.sp.:104

H3AKW1              	100.00%		P72661              	100.00%
H3AMT7              	36.53%		
Bootstrap support for H3AKW1 as seed ortholog is 100%.
Bootstrap support for P72661 as seed ortholog is 100%.

Group of orthologs #282. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:9 Synechocystis.sp.:103

H3AZI0              	100.00%		P54735              	100.00%
H3BA39              	60.76%		
H2ZT47              	38.76%		
H3ASG5              	10.53%		
H2ZXF2              	5.24%		
Bootstrap support for H3AZI0 as seed ortholog is 56%.
Alternative seed ortholog is H3A3H7 (9 bits away from this cluster)
Bootstrap support for P54735 as seed ortholog is 100%.

Group of orthologs #283. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:31 Synechocystis.sp.:103

H3AQH4              	100.00%		Q55513              	100.00%
Bootstrap support for H3AQH4 as seed ortholog is 84%.
Bootstrap support for Q55513 as seed ortholog is 100%.

Group of orthologs #284. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:26 Synechocystis.sp.:103

H3ATB7              	100.00%		Q55724              	100.00%
Bootstrap support for H3ATB7 as seed ortholog is 77%.
Bootstrap support for Q55724 as seed ortholog is 100%.

Group of orthologs #285. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 Synechocystis.sp.:102

H3BGB3              	100.00%		P74230              	100.00%
Bootstrap support for H3BGB3 as seed ortholog is 99%.
Bootstrap support for P74230 as seed ortholog is 100%.

Group of orthologs #286. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 Synechocystis.sp.:102

O03166              	100.00%		P72714              	100.00%
Bootstrap support for O03166 as seed ortholog is 100%.
Bootstrap support for P72714 as seed ortholog is 100%.

Group of orthologs #287. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:1 Synechocystis.sp.:20

M3XJ65              	100.00%		Q55922              	100.00%
H3AAG7              	31.62%		
Bootstrap support for M3XJ65 as seed ortholog is 48%.
Alternative seed ortholog is H3B355 (1 bits away from this cluster)
Bootstrap support for Q55922 as seed ortholog is 75%.

Group of orthologs #288. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 Synechocystis.sp.:101

H3A9L9              	100.00%		P73560              	100.00%
Bootstrap support for H3A9L9 as seed ortholog is 100%.
Bootstrap support for P73560 as seed ortholog is 100%.

Group of orthologs #289. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 Synechocystis.sp.:100

H3BD43              	100.00%		P73015              	100.00%
H3B050              	16.88%		
Bootstrap support for H3BD43 as seed ortholog is 100%.
Bootstrap support for P73015 as seed ortholog is 100%.

Group of orthologs #290. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 Synechocystis.sp.:100

H3AJF3              	100.00%		P74492              	100.00%
Bootstrap support for H3AJF3 as seed ortholog is 83%.
Bootstrap support for P74492 as seed ortholog is 100%.

Group of orthologs #291. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 Synechocystis.sp.:100

H3BBW9              	100.00%		P73242              	100.00%
Bootstrap support for H3BBW9 as seed ortholog is 100%.
Bootstrap support for P73242 as seed ortholog is 100%.

Group of orthologs #292. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 Synechocystis.sp.:99

H3AD61              	100.00%		P73141              	100.00%
Bootstrap support for H3AD61 as seed ortholog is 100%.
Bootstrap support for P73141 as seed ortholog is 100%.

Group of orthologs #293. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:30 Synechocystis.sp.:99

H3AS95              	100.00%		P74346              	100.00%
Bootstrap support for H3AS95 as seed ortholog is 80%.
Bootstrap support for P74346 as seed ortholog is 100%.

Group of orthologs #294. Best score 98 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 Synechocystis.sp.:98

H3BEQ3              	100.00%		P73728              	100.00%
Bootstrap support for H3BEQ3 as seed ortholog is 100%.
Bootstrap support for P73728 as seed ortholog is 100%.

Group of orthologs #295. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:26 Synechocystis.sp.:97

H3ALI2              	100.00%		Q55493              	100.00%
H3AMB4              	83.10%		P73939              	17.84%
Bootstrap support for H3ALI2 as seed ortholog is 73%.
Alternative seed ortholog is H3ANZ8 (26 bits away from this cluster)
Bootstrap support for Q55493 as seed ortholog is 100%.

Group of orthologs #296. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 Synechocystis.sp.:97

H3ASE1              	100.00%		P52056              	100.00%
Bootstrap support for H3ASE1 as seed ortholog is 100%.
Bootstrap support for P52056 as seed ortholog is 100%.

Group of orthologs #297. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 Synechocystis.sp.:96

H3AJV4              	100.00%		P73441              	100.00%
Bootstrap support for H3AJV4 as seed ortholog is 100%.
Bootstrap support for P73441 as seed ortholog is 100%.

Group of orthologs #298. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 Synechocystis.sp.:96

M3XGZ9              	100.00%		Q55535              	100.00%
Bootstrap support for M3XGZ9 as seed ortholog is 100%.
Bootstrap support for Q55535 as seed ortholog is 100%.

Group of orthologs #299. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 Synechocystis.sp.:94

H3AKV5              	100.00%		Q55794              	100.00%
                    	       		P72799              	7.47%
Bootstrap support for H3AKV5 as seed ortholog is 100%.
Bootstrap support for Q55794 as seed ortholog is 100%.

Group of orthologs #300. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 Synechocystis.sp.:94

H2ZV22              	100.00%		P73715              	100.00%
Bootstrap support for H2ZV22 as seed ortholog is 100%.
Bootstrap support for P73715 as seed ortholog is 100%.

Group of orthologs #301. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 Synechocystis.sp.:93

H3A0E8              	100.00%		Q55364              	100.00%
H2ZWV6              	50.19%		
Bootstrap support for H3A0E8 as seed ortholog is 100%.
Bootstrap support for Q55364 as seed ortholog is 100%.

Group of orthologs #302. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 Synechocystis.sp.:92

H2ZVI3              	100.00%		P73885              	100.00%
H3BBQ4              	7.76%		
Bootstrap support for H2ZVI3 as seed ortholog is 100%.
Bootstrap support for P73885 as seed ortholog is 100%.

Group of orthologs #303. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 Synechocystis.sp.:92

H3A182              	100.00%		P74229              	100.00%
Bootstrap support for H3A182 as seed ortholog is 95%.
Bootstrap support for P74229 as seed ortholog is 100%.

Group of orthologs #304. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 Synechocystis.sp.:47

H2ZX98              	100.00%		P73212              	100.00%
H3A0X1              	16.58%		
Bootstrap support for H2ZX98 as seed ortholog is 89%.
Bootstrap support for P73212 as seed ortholog is 89%.

Group of orthologs #305. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:4 Synechocystis.sp.:91

H3AXD8              	100.00%		P72666              	100.00%
Bootstrap support for H3AXD8 as seed ortholog is 56%.
Alternative seed ortholog is H2ZYS5 (4 bits away from this cluster)
Bootstrap support for P72666 as seed ortholog is 100%.

Group of orthologs #306. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 Synechocystis.sp.:91

H3B6N8              	100.00%		P73294              	100.00%
Bootstrap support for H3B6N8 as seed ortholog is 99%.
Bootstrap support for P73294 as seed ortholog is 100%.

Group of orthologs #307. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:10 Synechocystis.sp.:89

H3BA76              	100.00%		P73469              	100.00%
H2ZVX5              	35.35%		P74297              	13.37%
H3BHP2              	12.59%		
H3B4E0              	11.42%		
Bootstrap support for H3BA76 as seed ortholog is 67%.
Alternative seed ortholog is H3B947 (10 bits away from this cluster)
Bootstrap support for P73469 as seed ortholog is 100%.

Group of orthologs #308. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 Synechocystis.sp.:29

H3AY08              	100.00%		Q46363              	100.00%
H3ARK4              	17.46%		
H3AHD4              	14.37%		
Bootstrap support for H3AY08 as seed ortholog is 100%.
Bootstrap support for Q46363 as seed ortholog is 73%.
Alternative seed ortholog is P73177 (29 bits away from this cluster)

Group of orthologs #309. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 Synechocystis.sp.:89

H3AT42              	100.00%		P74732              	100.00%
H3AWZ8              	72.69%		
Bootstrap support for H3AT42 as seed ortholog is 100%.
Bootstrap support for P74732 as seed ortholog is 100%.

Group of orthologs #310. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 Synechocystis.sp.:89

H3ANJ8              	100.00%		Q55695              	100.00%
Bootstrap support for H3ANJ8 as seed ortholog is 100%.
Bootstrap support for Q55695 as seed ortholog is 100%.

Group of orthologs #311. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 Synechocystis.sp.:89

H3BB44              	100.00%		Q55163              	100.00%
Bootstrap support for H3BB44 as seed ortholog is 100%.
Bootstrap support for Q55163 as seed ortholog is 100%.

Group of orthologs #312. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:24 Synechocystis.sp.:4

H2ZUS7              	100.00%		P74027              	100.00%
H3AQY8              	69.01%		
Bootstrap support for H2ZUS7 as seed ortholog is 68%.
Alternative seed ortholog is H3ABG6 (24 bits away from this cluster)
Bootstrap support for P74027 as seed ortholog is 63%.
Alternative seed ortholog is P74643 (4 bits away from this cluster)

Group of orthologs #313. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 Synechocystis.sp.:87

H3AVQ3              	100.00%		P73790              	100.00%
H3AAL5              	41.22%		
Bootstrap support for H3AVQ3 as seed ortholog is 100%.
Bootstrap support for P73790 as seed ortholog is 100%.

Group of orthologs #314. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 Synechocystis.sp.:87

H3B4I8              	100.00%		P74041              	100.00%
H3AJP6              	60.32%		
Bootstrap support for H3B4I8 as seed ortholog is 100%.
Bootstrap support for P74041 as seed ortholog is 100%.

Group of orthologs #315. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 Synechocystis.sp.:87

H3AJ69              	100.00%		P73618              	100.00%
Bootstrap support for H3AJ69 as seed ortholog is 100%.
Bootstrap support for P73618 as seed ortholog is 100%.

Group of orthologs #316. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 Synechocystis.sp.:87

H3AW53              	100.00%		P73043              	100.00%
Bootstrap support for H3AW53 as seed ortholog is 100%.
Bootstrap support for P73043 as seed ortholog is 100%.

Group of orthologs #317. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 Synechocystis.sp.:30

H3AI66              	100.00%		P72911              	100.00%
Bootstrap support for H3AI66 as seed ortholog is 100%.
Bootstrap support for P72911 as seed ortholog is 79%.

Group of orthologs #318. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 Synechocystis.sp.:86

H3AD59              	100.00%		Q55909              	100.00%
Bootstrap support for H3AD59 as seed ortholog is 100%.
Bootstrap support for Q55909 as seed ortholog is 100%.

Group of orthologs #319. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 Synechocystis.sp.:15

H3BB10              	100.00%		P73669              	100.00%
H3BEI3              	5.50%		Q55159              	9.24%
                    	       		P74016              	7.96%
                    	       		P73670              	5.52%
Bootstrap support for H3BB10 as seed ortholog is 100%.
Bootstrap support for P73669 as seed ortholog is 69%.
Alternative seed ortholog is P74305 (15 bits away from this cluster)

Group of orthologs #320. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 Synechocystis.sp.:84

H2ZZC4              	100.00%		Q55388              	100.00%
M3XIP1              	61.68%		
Bootstrap support for H2ZZC4 as seed ortholog is 100%.
Bootstrap support for Q55388 as seed ortholog is 100%.

Group of orthologs #321. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 Synechocystis.sp.:84

M3XJB8              	100.00%		Q6YRX0              	100.00%
                    	       		Q6ZEM3              	100.00%
Bootstrap support for M3XJB8 as seed ortholog is 100%.
Bootstrap support for Q6YRX0 as seed ortholog is 100%.
Bootstrap support for Q6ZEM3 as seed ortholog is 100%.

Group of orthologs #322. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:3 Synechocystis.sp.:84

H2ZRK8              	100.00%		P73335              	100.00%
Bootstrap support for H2ZRK8 as seed ortholog is 52%.
Alternative seed ortholog is H3A7H2 (3 bits away from this cluster)
Bootstrap support for P73335 as seed ortholog is 100%.

Group of orthologs #323. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 Synechocystis.sp.:40

H2ZVN0              	100.00%		P73598              	100.00%
Bootstrap support for H2ZVN0 as seed ortholog is 100%.
Bootstrap support for P73598 as seed ortholog is 87%.

Group of orthologs #324. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 Synechocystis.sp.:84

H3APX0              	100.00%		P74456              	100.00%
Bootstrap support for H3APX0 as seed ortholog is 100%.
Bootstrap support for P74456 as seed ortholog is 100%.

Group of orthologs #325. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 Synechocystis.sp.:83

H3AN71              	100.00%		P72702              	100.00%
H3AZX3              	32.68%		
H3ATC2              	29.15%		
Bootstrap support for H3AN71 as seed ortholog is 100%.
Bootstrap support for P72702 as seed ortholog is 100%.

Group of orthologs #326. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 Synechocystis.sp.:83

H3ATN4              	100.00%		P74323              	100.00%
Bootstrap support for H3ATN4 as seed ortholog is 100%.
Bootstrap support for P74323 as seed ortholog is 100%.

Group of orthologs #327. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 Synechocystis.sp.:83

H3BDX7              	100.00%		P74328              	100.00%
Bootstrap support for H3BDX7 as seed ortholog is 100%.
Bootstrap support for P74328 as seed ortholog is 100%.

Group of orthologs #328. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 Synechocystis.sp.:83

H3BHR6              	100.00%		P74071              	100.00%
Bootstrap support for H3BHR6 as seed ortholog is 100%.
Bootstrap support for P74071 as seed ortholog is 100%.

Group of orthologs #329. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 Synechocystis.sp.:82

H2ZZA0              	100.00%		P73033              	100.00%
H3ATR1              	77.29%		
H3B379              	68.92%		
Bootstrap support for H2ZZA0 as seed ortholog is 100%.
Bootstrap support for P73033 as seed ortholog is 100%.

Group of orthologs #330. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:21 Synechocystis.sp.:82

H3AWM0              	100.00%		P73795              	100.00%
H3AR54              	24.77%		
H3AU11              	18.69%		
Bootstrap support for H3AWM0 as seed ortholog is 85%.
Bootstrap support for P73795 as seed ortholog is 100%.

Group of orthologs #331. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 Synechocystis.sp.:82

H3AN22              	100.00%		Q55477              	100.00%
Bootstrap support for H3AN22 as seed ortholog is 100%.
Bootstrap support for Q55477 as seed ortholog is 100%.

Group of orthologs #332. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 Synechocystis.sp.:82

H3B705              	100.00%		P74292              	100.00%
Bootstrap support for H3B705 as seed ortholog is 100%.
Bootstrap support for P74292 as seed ortholog is 100%.

Group of orthologs #333. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 Synechocystis.sp.:82

M3XJU9              	100.00%		P73784              	100.00%
Bootstrap support for M3XJU9 as seed ortholog is 100%.
Bootstrap support for P73784 as seed ortholog is 100%.

Group of orthologs #334. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 Synechocystis.sp.:81

H3AQ49              	100.00%		P72973              	100.00%
                    	       		Q55190              	5.61%
Bootstrap support for H3AQ49 as seed ortholog is 100%.
Bootstrap support for P72973 as seed ortholog is 100%.

Group of orthologs #335. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:22 Synechocystis.sp.:32

H2ZYY0              	100.00%		P73138              	100.00%
Bootstrap support for H2ZYY0 as seed ortholog is 67%.
Alternative seed ortholog is H3AZV5 (22 bits away from this cluster)
Bootstrap support for P73138 as seed ortholog is 80%.

Group of orthologs #336. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:27 Synechocystis.sp.:81

H3A0K1              	100.00%		P73717              	100.00%
Bootstrap support for H3A0K1 as seed ortholog is 81%.
Bootstrap support for P73717 as seed ortholog is 100%.

Group of orthologs #337. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 Synechocystis.sp.:79

H2ZWW5              	100.00%		P74592              	100.00%
H3A060              	19.26%		Q55653              	100.00%
Bootstrap support for H2ZWW5 as seed ortholog is 100%.
Bootstrap support for P74592 as seed ortholog is 100%.
Bootstrap support for Q55653 as seed ortholog is 100%.

Group of orthologs #338. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 Synechocystis.sp.:79

H3B1T9              	100.00%		P26525              	100.00%
Bootstrap support for H3B1T9 as seed ortholog is 100%.
Bootstrap support for P26525 as seed ortholog is 100%.

Group of orthologs #339. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 Synechocystis.sp.:77

H3B0G4              	100.00%		P72650              	100.00%
H2ZT78              	35.47%		
H3AZZ5              	21.61%		
H3B3S1              	21.41%		
H3AY25              	17.93%		
H3B4I3              	16.47%		
Bootstrap support for H3B0G4 as seed ortholog is 100%.
Bootstrap support for P72650 as seed ortholog is 100%.

Group of orthologs #340. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:30 Synechocystis.sp.:19

H3B3H3              	100.00%		Q57014              	100.00%
                    	       		P73557              	47.66%
Bootstrap support for H3B3H3 as seed ortholog is 97%.
Bootstrap support for Q57014 as seed ortholog is 73%.
Alternative seed ortholog is Q55765 (19 bits away from this cluster)

Group of orthologs #341. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 Synechocystis.sp.:77

H3AEL4              	100.00%		P74261              	100.00%
Bootstrap support for H3AEL4 as seed ortholog is 100%.
Bootstrap support for P74261 as seed ortholog is 100%.

Group of orthologs #342. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 Synechocystis.sp.:77

H3AR72              	100.00%		P72724              	100.00%
Bootstrap support for H3AR72 as seed ortholog is 100%.
Bootstrap support for P72724 as seed ortholog is 100%.

Group of orthologs #343. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 Synechocystis.sp.:77

H3B0G2              	100.00%		P73125              	100.00%
Bootstrap support for H3B0G2 as seed ortholog is 100%.
Bootstrap support for P73125 as seed ortholog is 100%.

Group of orthologs #344. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 Synechocystis.sp.:76

H3BIR9              	100.00%		P48957              	100.00%
Bootstrap support for H3BIR9 as seed ortholog is 100%.
Bootstrap support for P48957 as seed ortholog is 100%.

Group of orthologs #345. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 Synechocystis.sp.:76

H3BID1              	100.00%		Q55470              	100.00%
Bootstrap support for H3BID1 as seed ortholog is 100%.
Bootstrap support for Q55470 as seed ortholog is 100%.

Group of orthologs #346. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 Synechocystis.sp.:75

H3AXU6              	100.00%		Q57456              	100.00%
H3AFM2              	52.93%		
Bootstrap support for H3AXU6 as seed ortholog is 100%.
Bootstrap support for Q57456 as seed ortholog is 100%.

Group of orthologs #347. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 Synechocystis.sp.:75

H3BDA7              	100.00%		P37101              	100.00%
H3ABU5              	38.05%		
Bootstrap support for H3BDA7 as seed ortholog is 100%.
Bootstrap support for P37101 as seed ortholog is 100%.

Group of orthologs #348. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 Synechocystis.sp.:74

M3XL98              	100.00%		P73757              	100.00%
H3A9B7              	16.32%		
H3AQH8              	8.83%		
Bootstrap support for M3XL98 as seed ortholog is 100%.
Bootstrap support for P73757 as seed ortholog is 100%.

Group of orthologs #349. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:21 Synechocystis.sp.:73

H3AIW3              	100.00%		Q55921              	100.00%
                    	       		Q6ZEQ0              	32.65%
Bootstrap support for H3AIW3 as seed ortholog is 67%.
Alternative seed ortholog is H3AQV8 (21 bits away from this cluster)
Bootstrap support for Q55921 as seed ortholog is 100%.

Group of orthologs #350. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 Synechocystis.sp.:73

H3AZJ2              	100.00%		Q55371              	100.00%
Bootstrap support for H3AZJ2 as seed ortholog is 100%.
Bootstrap support for Q55371 as seed ortholog is 100%.

Group of orthologs #351. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 Synechocystis.sp.:73

H3BHL8              	100.00%		P73197              	100.00%
Bootstrap support for H3BHL8 as seed ortholog is 100%.
Bootstrap support for P73197 as seed ortholog is 100%.

Group of orthologs #352. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 Synechocystis.sp.:72

H3A5L8              	100.00%		Q55962              	100.00%
H3BCV5              	61.51%		
H3AGX9              	55.15%		
H3B3Y7              	47.18%		
H3B9P4              	33.09%		
H3B2L2              	31.24%		
Bootstrap support for H3A5L8 as seed ortholog is 100%.
Bootstrap support for Q55962 as seed ortholog is 100%.

Group of orthologs #353. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:23 Synechocystis.sp.:72

H3A5R1              	100.00%		P73310              	100.00%
H3ADD1              	97.61%		
Bootstrap support for H3A5R1 as seed ortholog is 84%.
Bootstrap support for P73310 as seed ortholog is 100%.

Group of orthologs #354. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 Synechocystis.sp.:72

H3APQ5              	100.00%		P74718              	100.00%
Bootstrap support for H3APQ5 as seed ortholog is 100%.
Bootstrap support for P74718 as seed ortholog is 100%.

Group of orthologs #355. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 Synechocystis.sp.:72

H3B6D7              	100.00%		Q05971              	100.00%
Bootstrap support for H3B6D7 as seed ortholog is 100%.
Bootstrap support for Q05971 as seed ortholog is 100%.

Group of orthologs #356. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 Synechocystis.sp.:71

H3B142              	100.00%		P73293              	100.00%
Bootstrap support for H3B142 as seed ortholog is 100%.
Bootstrap support for P73293 as seed ortholog is 100%.

Group of orthologs #357. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 Synechocystis.sp.:70

H2ZY23              	100.00%		P52231              	100.00%
M3XI97              	27.27%		P52232              	14.86%
                    	       		P73263              	13.51%
Bootstrap support for H2ZY23 as seed ortholog is 100%.
Bootstrap support for P52231 as seed ortholog is 100%.

Group of orthologs #358. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 Synechocystis.sp.:70

H3AE52              	100.00%		P73482              	100.00%
Bootstrap support for H3AE52 as seed ortholog is 100%.
Bootstrap support for P73482 as seed ortholog is 100%.

Group of orthologs #359. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:2 Synechocystis.sp.:70

H3BHD8              	100.00%		P72731              	100.00%
Bootstrap support for H3BHD8 as seed ortholog is 54%.
Alternative seed ortholog is H2ZXI0 (2 bits away from this cluster)
Bootstrap support for P72731 as seed ortholog is 100%.

Group of orthologs #360. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 Synechocystis.sp.:69

M3XKJ9              	100.00%		P72934              	100.00%
H3AFS9              	7.12%		
H3A2Y8              	5.17%		
Bootstrap support for M3XKJ9 as seed ortholog is 100%.
Bootstrap support for P72934 as seed ortholog is 100%.

Group of orthologs #361. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 Synechocystis.sp.:67

H3AFZ7              	100.00%		P74068              	100.00%
H3ASC2              	11.51%		
H3AV21              	7.53%		
H3B7A3              	6.03%		
H3ARQ7              	5.75%		
Bootstrap support for H3AFZ7 as seed ortholog is 100%.
Bootstrap support for P74068 as seed ortholog is 100%.

Group of orthologs #362. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 Synechocystis.sp.:67

H3B1Q8              	100.00%		P72825              	100.00%
H3AY50              	38.20%		Q55455              	9.55%
Bootstrap support for H3B1Q8 as seed ortholog is 100%.
Bootstrap support for P72825 as seed ortholog is 100%.

Group of orthologs #363. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 Synechocystis.sp.:67

H3BBT6              	100.00%		Q08871              	100.00%
H3BBF5              	60.04%		
Bootstrap support for H3BBT6 as seed ortholog is 100%.
Bootstrap support for Q08871 as seed ortholog is 100%.

Group of orthologs #364. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:11 Synechocystis.sp.:21

H3AIK7              	100.00%		P73490              	100.00%
Bootstrap support for H3AIK7 as seed ortholog is 55%.
Alternative seed ortholog is H2ZY18 (11 bits away from this cluster)
Bootstrap support for P73490 as seed ortholog is 74%.
Alternative seed ortholog is P73096 (21 bits away from this cluster)

Group of orthologs #365. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 Synechocystis.sp.:67

H3AG59              	100.00%		Q55474              	100.00%
Bootstrap support for H3AG59 as seed ortholog is 100%.
Bootstrap support for Q55474 as seed ortholog is 100%.

Group of orthologs #366. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:3 Synechocystis.sp.:67

H3AHK3              	100.00%		Q55807              	100.00%
Bootstrap support for H3AHK3 as seed ortholog is 49%.
Alternative seed ortholog is H3AB35 (3 bits away from this cluster)
Bootstrap support for Q55807 as seed ortholog is 100%.

Group of orthologs #367. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 Synechocystis.sp.:67

H3AU13              	100.00%		Q55142              	100.00%
Bootstrap support for H3AU13 as seed ortholog is 100%.
Bootstrap support for Q55142 as seed ortholog is 100%.

Group of orthologs #368. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:23 Synechocystis.sp.:67

H3B4I9              	100.00%		P74614              	100.00%
Bootstrap support for H3B4I9 as seed ortholog is 49%.
Alternative seed ortholog is H3BCW2 (23 bits away from this cluster)
Bootstrap support for P74614 as seed ortholog is 100%.

Group of orthologs #369. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 Synechocystis.sp.:67

M3XJE5              	100.00%		P73962              	100.00%
Bootstrap support for M3XJE5 as seed ortholog is 100%.
Bootstrap support for P73962 as seed ortholog is 100%.

Group of orthologs #370. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 Synechocystis.sp.:67

M3XIA9              	100.00%		Q55480              	100.00%
Bootstrap support for M3XIA9 as seed ortholog is 100%.
Bootstrap support for Q55480 as seed ortholog is 100%.

Group of orthologs #371. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 Synechocystis.sp.:22

H3A8Y3              	100.00%		P73115              	100.00%
                    	       		P73384              	11.46%
Bootstrap support for H3A8Y3 as seed ortholog is 100%.
Bootstrap support for P73115 as seed ortholog is 76%.

Group of orthologs #372. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 Synechocystis.sp.:66

H3B460              	100.00%		P72874              	100.00%
Bootstrap support for H3B460 as seed ortholog is 100%.
Bootstrap support for P72874 as seed ortholog is 100%.

Group of orthologs #373. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 Synechocystis.sp.:64

H3B281              	100.00%		P72660              	100.00%
                    	       		P73157              	31.67%
Bootstrap support for H3B281 as seed ortholog is 100%.
Bootstrap support for P72660 as seed ortholog is 100%.

Group of orthologs #374. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 Synechocystis.sp.:64

O03171              	100.00%		P19045              	100.00%
Bootstrap support for O03171 as seed ortholog is 100%.
Bootstrap support for P19045 as seed ortholog is 100%.

Group of orthologs #375. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 Synechocystis.sp.:64

O03848              	100.00%		Q06474              	100.00%
Bootstrap support for O03848 as seed ortholog is 100%.
Bootstrap support for Q06474 as seed ortholog is 100%.

Group of orthologs #376. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 Synechocystis.sp.:63

H3BAR6              	100.00%		P74321              	100.00%
Bootstrap support for H3BAR6 as seed ortholog is 100%.
Bootstrap support for P74321 as seed ortholog is 100%.

Group of orthologs #377. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 Synechocystis.sp.:62

H3AB68              	100.00%		P73585              	100.00%
Bootstrap support for H3AB68 as seed ortholog is 100%.
Bootstrap support for P73585 as seed ortholog is 100%.

Group of orthologs #378. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:10 Synechocystis.sp.:62

H3AT62              	100.00%		Q55139              	100.00%
Bootstrap support for H3AT62 as seed ortholog is 60%.
Alternative seed ortholog is H3B4G6 (10 bits away from this cluster)
Bootstrap support for Q55139 as seed ortholog is 100%.

Group of orthologs #379. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 Synechocystis.sp.:62

H3B668              	100.00%		P73296              	100.00%
Bootstrap support for H3B668 as seed ortholog is 100%.
Bootstrap support for P73296 as seed ortholog is 100%.

Group of orthologs #380. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 Synechocystis.sp.:61

H3A6S6              	100.00%		Q55907              	100.00%
H3AAR6              	66.33%		
Bootstrap support for H3A6S6 as seed ortholog is 100%.
Bootstrap support for Q55907 as seed ortholog is 100%.

Group of orthologs #381. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 Synechocystis.sp.:61

H3AIK3              	100.00%		Q6ZEL5              	100.00%
Bootstrap support for H3AIK3 as seed ortholog is 100%.
Bootstrap support for Q6ZEL5 as seed ortholog is 100%.

Group of orthologs #382. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 Synechocystis.sp.:61

H3AZH8              	100.00%		P73304              	100.00%
Bootstrap support for H3AZH8 as seed ortholog is 100%.
Bootstrap support for P73304 as seed ortholog is 100%.

Group of orthologs #383. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 Synechocystis.sp.:61

H3BDT0              	100.00%		P74144              	100.00%
Bootstrap support for H3BDT0 as seed ortholog is 100%.
Bootstrap support for P74144 as seed ortholog is 100%.

Group of orthologs #384. Best score 60 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 Synechocystis.sp.:60

H3B2C2              	100.00%		P73879              	100.00%
H3API5              	51.02%		
H3BBX9              	9.93%		
H3B1Y3              	5.71%		
Bootstrap support for H3B2C2 as seed ortholog is 100%.
Bootstrap support for P73879 as seed ortholog is 100%.

Group of orthologs #385. Best score 60 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 Synechocystis.sp.:60

H3B9L8              	100.00%		Q6ZEC1              	100.00%
                    	       		P72810              	76.63%
Bootstrap support for H3B9L8 as seed ortholog is 100%.
Bootstrap support for Q6ZEC1 as seed ortholog is 100%.

Group of orthologs #386. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 Synechocystis.sp.:59

H3ANA0              	100.00%		Q6ZET8              	100.00%
H3A7I3              	39.41%		
H3ALH4              	38.01%		
H3ATF6              	37.69%		
M3XIM5              	30.84%		
H3BE49              	30.06%		
M3XH41              	30.06%		
H3AKM4              	19.31%		
Bootstrap support for H3ANA0 as seed ortholog is 100%.
Bootstrap support for Q6ZET8 as seed ortholog is 100%.

Group of orthologs #387. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 Synechocystis.sp.:59

H2ZWF2              	100.00%		P73797              	100.00%
H2ZW13              	24.07%		
H3B951              	17.91%		
Bootstrap support for H2ZWF2 as seed ortholog is 100%.
Bootstrap support for P73797 as seed ortholog is 100%.

Group of orthologs #388. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 Synechocystis.sp.:59

H3B6P9              	100.00%		Q55484              	100.00%
H2ZU48              	19.91%		
Bootstrap support for H3B6P9 as seed ortholog is 100%.
Bootstrap support for Q55484 as seed ortholog is 100%.

Group of orthologs #389. Best score 58 bits
Score difference with first non-orthologous sequence - L.chalumnae:12 Synechocystis.sp.:58

H2ZXI6              	100.00%		Q55507              	100.00%
H3AKE9              	46.00%		
H3AWW3              	9.89%		
Bootstrap support for H2ZXI6 as seed ortholog is 64%.
Alternative seed ortholog is H3BHB3 (12 bits away from this cluster)
Bootstrap support for Q55507 as seed ortholog is 100%.

Group of orthologs #390. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 Synechocystis.sp.:57

H3AR81              	100.00%		P72953              	100.00%
H3AZR8              	37.04%		
H3ANS1              	20.37%		
Bootstrap support for H3AR81 as seed ortholog is 100%.
Bootstrap support for P72953 as seed ortholog is 100%.

Group of orthologs #391. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 Synechocystis.sp.:57

H3ATC3              	100.00%		P73192              	100.00%
H3B980              	53.04%		
H3A7T1              	10.95%		
Bootstrap support for H3ATC3 as seed ortholog is 100%.
Bootstrap support for P73192 as seed ortholog is 100%.

Group of orthologs #392. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 Synechocystis.sp.:57

H3BB88              	100.00%		P54691              	100.00%
H2ZY28              	65.14%		
Bootstrap support for H3BB88 as seed ortholog is 100%.
Bootstrap support for P54691 as seed ortholog is 100%.

Group of orthologs #393. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 Synechocystis.sp.:56

H3AGM2              	100.00%		P0DJF8              	100.00%
H3AFG7              	56.32%		
M3XGW4              	54.46%		
Bootstrap support for H3AGM2 as seed ortholog is 100%.
Bootstrap support for P0DJF8 as seed ortholog is 100%.

Group of orthologs #394. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 Synechocystis.sp.:56

H3ARE2              	100.00%		Q59978              	100.00%
H3ABV3              	37.57%		
Bootstrap support for H3ARE2 as seed ortholog is 100%.
Bootstrap support for Q59978 as seed ortholog is 100%.

Group of orthologs #395. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 Synechocystis.sp.:56

H3A4L5              	100.00%		P37294              	100.00%
Bootstrap support for H3A4L5 as seed ortholog is 100%.
Bootstrap support for P37294 as seed ortholog is 100%.

Group of orthologs #396. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 Synechocystis.sp.:56

H3AA50              	100.00%		P36237              	100.00%
Bootstrap support for H3AA50 as seed ortholog is 100%.
Bootstrap support for P36237 as seed ortholog is 100%.

Group of orthologs #397. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 Synechocystis.sp.:56

H3BFV1              	100.00%		P74498              	100.00%
Bootstrap support for H3BFV1 as seed ortholog is 100%.
Bootstrap support for P74498 as seed ortholog is 100%.

Group of orthologs #398. Best score 55 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 Synechocystis.sp.:55

H3B9E4              	100.00%		P74372              	100.00%
Bootstrap support for H3B9E4 as seed ortholog is 100%.
Bootstrap support for P74372 as seed ortholog is 100%.

Group of orthologs #399. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 Synechocystis.sp.:54

H3AUG1              	100.00%		P74432              	100.00%
Bootstrap support for H3AUG1 as seed ortholog is 100%.
Bootstrap support for P74432 as seed ortholog is 100%.

Group of orthologs #400. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 Synechocystis.sp.:54

H3BDG9              	100.00%		P74772              	100.00%
Bootstrap support for H3BDG9 as seed ortholog is 100%.
Bootstrap support for P74772 as seed ortholog is 100%.

Group of orthologs #401. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 Synechocystis.sp.:53

H3B9F4              	100.00%		P74409              	100.00%
H3A441              	43.60%		P74078              	10.93%
H3BA13              	41.92%		
Bootstrap support for H3B9F4 as seed ortholog is 100%.
Bootstrap support for P74409 as seed ortholog is 100%.

Group of orthologs #402. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 Synechocystis.sp.:53

H2ZY36              	100.00%		P73313              	100.00%
Bootstrap support for H2ZY36 as seed ortholog is 100%.
Bootstrap support for P73313 as seed ortholog is 100%.

Group of orthologs #403. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 Synechocystis.sp.:52

H2ZW57              	100.00%		P77961              	100.00%
H3B669              	71.48%		
Bootstrap support for H2ZW57 as seed ortholog is 100%.
Bootstrap support for P77961 as seed ortholog is 100%.

Group of orthologs #404. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 Synechocystis.sp.:52

H3A401              	100.00%		P74714              	100.00%
                    	       		P26290              	36.76%
Bootstrap support for H3A401 as seed ortholog is 100%.
Bootstrap support for P74714 as seed ortholog is 100%.

Group of orthologs #405. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 Synechocystis.sp.:52

H3BGZ8              	100.00%		P73295              	100.00%
H3B8J2              	44.36%		
Bootstrap support for H3BGZ8 as seed ortholog is 100%.
Bootstrap support for P73295 as seed ortholog is 100%.

Group of orthologs #406. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 Synechocystis.sp.:52

H2ZTX1              	100.00%		P74114              	100.00%
Bootstrap support for H2ZTX1 as seed ortholog is 100%.
Bootstrap support for P74114 as seed ortholog is 100%.

Group of orthologs #407. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 Synechocystis.sp.:52

H3A2N7              	100.00%		Q55548              	100.00%
Bootstrap support for H3A2N7 as seed ortholog is 100%.
Bootstrap support for Q55548 as seed ortholog is 100%.

Group of orthologs #408. Best score 51 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 Synechocystis.sp.:51

H3AAY7              	100.00%		P74003              	100.00%
Bootstrap support for H3AAY7 as seed ortholog is 100%.
Bootstrap support for P74003 as seed ortholog is 100%.

Group of orthologs #409. Best score 51 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 Synechocystis.sp.:51

H3AMF2              	100.00%		P48944              	100.00%
Bootstrap support for H3AMF2 as seed ortholog is 100%.
Bootstrap support for P48944 as seed ortholog is 100%.

Group of orthologs #410. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:6 Synechocystis.sp.:50

H3A723              	100.00%		P74084              	100.00%
H3A0R8              	100.00%		P73091              	100.00%
H3AFS1              	16.19%		
Bootstrap support for H3A723 as seed ortholog is 56%.
Alternative seed ortholog is H3B3I2 (6 bits away from this cluster)
Bootstrap support for H3A0R8 as seed ortholog is 43%.
Alternative seed ortholog is H3B3I2 (6 bits away from this cluster)
Bootstrap support for P74084 as seed ortholog is 100%.
Bootstrap support for P73091 as seed ortholog is 100%.

Group of orthologs #411. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 Synechocystis.sp.:50

H3AMK4              	100.00%		P73316              	100.00%
Bootstrap support for H3AMK4 as seed ortholog is 100%.
Bootstrap support for P73316 as seed ortholog is 100%.

Group of orthologs #412. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 Synechocystis.sp.:49

H3A8Q6              	100.00%		P74123              	100.00%
                    	       		P72802              	16.10%
                    	       		Q55362              	5.43%
                    	       		Q04737              	5.23%
Bootstrap support for H3A8Q6 as seed ortholog is 100%.
Bootstrap support for P74123 as seed ortholog is 100%.

Group of orthologs #413. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:4 Synechocystis.sp.:49

H3B391              	100.00%		P72649              	100.00%
H3B5R5              	52.60%		
H3BB55              	38.88%		
Bootstrap support for H3B391 as seed ortholog is 52%.
Alternative seed ortholog is H3BE16 (4 bits away from this cluster)
Bootstrap support for P72649 as seed ortholog is 100%.

Group of orthologs #414. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 Synechocystis.sp.:49

H3A519              	100.00%		P74226              	100.00%
Bootstrap support for H3A519 as seed ortholog is 100%.
Bootstrap support for P74226 as seed ortholog is 100%.

Group of orthologs #415. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 Synechocystis.sp.:49

H3A242              	100.00%		Q55593              	100.00%
Bootstrap support for H3A242 as seed ortholog is 100%.
Bootstrap support for Q55593 as seed ortholog is 100%.

Group of orthologs #416. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 Synechocystis.sp.:49

H3BE98              	100.00%		Q6ZEW9              	100.00%
Bootstrap support for H3BE98 as seed ortholog is 100%.
Bootstrap support for Q6ZEW9 as seed ortholog is 100%.

Group of orthologs #417. Best score 48 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 Synechocystis.sp.:48

H3APS2              	100.00%		Q6ZET4              	100.00%
H3BHS7              	63.30%		
Bootstrap support for H3APS2 as seed ortholog is 100%.
Bootstrap support for Q6ZET4 as seed ortholog is 100%.

Group of orthologs #418. Best score 48 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 Synechocystis.sp.:48

H3BBH0              	100.00%		P80507              	100.00%
H3ALH7              	50.68%		
Bootstrap support for H3BBH0 as seed ortholog is 100%.
Bootstrap support for P80507 as seed ortholog is 100%.

Group of orthologs #419. Best score 48 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 Synechocystis.sp.:3

H3AKY1              	100.00%		P74341              	100.00%
Bootstrap support for H3AKY1 as seed ortholog is 100%.
Bootstrap support for P74341 as seed ortholog is 47%.
Alternative seed ortholog is P73258 (3 bits away from this cluster)

Group of orthologs #420. Best score 48 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 Synechocystis.sp.:48

H3AQL2              	100.00%		P73308              	100.00%
Bootstrap support for H3AQL2 as seed ortholog is 100%.
Bootstrap support for P73308 as seed ortholog is 100%.

Group of orthologs #421. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 Synechocystis.sp.:47

H2ZZA5              	100.00%		P73626              	100.00%
H3AB04              	41.94%		
H3ACF2              	11.55%		
H3AW71              	8.56%		
H3B1C5              	8.13%		
H3BH13              	7.85%		
H3AUD4              	7.70%		
H3AWP3              	6.70%		
Bootstrap support for H2ZZA5 as seed ortholog is 100%.
Bootstrap support for P73626 as seed ortholog is 100%.

Group of orthologs #422. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 Synechocystis.sp.:47

H3A2N8              	100.00%		P73470              	100.00%
Bootstrap support for H3A2N8 as seed ortholog is 100%.
Bootstrap support for P73470 as seed ortholog is 100%.

Group of orthologs #423. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 Synechocystis.sp.:47

H3AM59              	100.00%		P73741              	100.00%
Bootstrap support for H3AM59 as seed ortholog is 100%.
Bootstrap support for P73741 as seed ortholog is 100%.

Group of orthologs #424. Best score 46 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 Synechocystis.sp.:46

H3AJ99              	100.00%		P72924              	100.00%
Bootstrap support for H3AJ99 as seed ortholog is 100%.
Bootstrap support for P72924 as seed ortholog is 100%.

Group of orthologs #425. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 Synechocystis.sp.:45

H3ASP4              	100.00%		P72762              	100.00%
Bootstrap support for H3ASP4 as seed ortholog is 100%.
Bootstrap support for P72762 as seed ortholog is 100%.

Group of orthologs #426. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 Synechocystis.sp.:44

H3AL65              	100.00%		P73931              	100.00%
H2ZXY3              	64.05%		
H3AK84              	44.40%		
H3AGL5              	41.06%		
M3XKG6              	39.69%		
Bootstrap support for H3AL65 as seed ortholog is 100%.
Bootstrap support for P73931 as seed ortholog is 100%.

Group of orthologs #427. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 Synechocystis.sp.:44

H3AEJ8              	100.00%		P74713              	100.00%
H3APZ5              	12.00%		
Bootstrap support for H3AEJ8 as seed ortholog is 100%.
Bootstrap support for P74713 as seed ortholog is 100%.

Group of orthologs #428. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 Synechocystis.sp.:44

H3AAX8              	100.00%		P73306              	100.00%
Bootstrap support for H3AAX8 as seed ortholog is 100%.
Bootstrap support for P73306 as seed ortholog is 100%.

Group of orthologs #429. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 Synechocystis.sp.:44

H3BI39              	100.00%		P73401              	100.00%
Bootstrap support for H3BI39 as seed ortholog is 100%.
Bootstrap support for P73401 as seed ortholog is 100%.

Group of orthologs #430. Best score 43 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 Synechocystis.sp.:43

H3ANI3              	100.00%		Q55758              	100.00%
H3A926              	52.68%		
H3BCU4              	50.35%		
Bootstrap support for H3ANI3 as seed ortholog is 100%.
Bootstrap support for Q55758 as seed ortholog is 100%.

Group of orthologs #431. Best score 43 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 Synechocystis.sp.:43

H2ZRU6              	100.00%		P74593              	100.00%
                    	       		P73492              	43.39%
Bootstrap support for H2ZRU6 as seed ortholog is 100%.
Bootstrap support for P74593 as seed ortholog is 100%.

Group of orthologs #432. Best score 42 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 Synechocystis.sp.:42

H2ZTW0              	100.00%		P73341              	100.00%
Bootstrap support for H2ZTW0 as seed ortholog is 100%.
Bootstrap support for P73341 as seed ortholog is 100%.

Group of orthologs #433. Best score 40 bits
Score difference with first non-orthologous sequence - L.chalumnae:40 Synechocystis.sp.:40

H3BHG7              	100.00%		P72634              	100.00%
H2ZYF6              	29.63%		
Bootstrap support for H3BHG7 as seed ortholog is 100%.
Bootstrap support for P72634 as seed ortholog is 100%.

Group of orthologs #434. Best score 40 bits
Score difference with first non-orthologous sequence - L.chalumnae:40 Synechocystis.sp.:40

H3A3A7              	100.00%		P72796              	100.00%
Bootstrap support for H3A3A7 as seed ortholog is 100%.
Bootstrap support for P72796 as seed ortholog is 100%.

Group of orthologs #435. Best score 40 bits
Score difference with first non-orthologous sequence - L.chalumnae:40 Synechocystis.sp.:40

H3A297              	100.00%		P73315              	100.00%
Bootstrap support for H3A297 as seed ortholog is 100%.
Bootstrap support for P73315 as seed ortholog is 100%.