###################################
358 groups of orthologs
577 in-paralogs from L.chalumnae
449 in-paralogs from P.kodakaraensis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 844 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.kodakaraensis:844

H3A0Y3              	100.00%		Q5JE32              	100.00%
Bootstrap support for H3A0Y3 as seed ortholog is 87%.
Bootstrap support for Q5JE32 as seed ortholog is 100%.

Group of orthologs #2. Best score 633 bits
Score difference with first non-orthologous sequence - L.chalumnae:331 P.kodakaraensis:633

H3BGV0              	100.00%		Q5JE33              	100.00%
Bootstrap support for H3BGV0 as seed ortholog is 100%.
Bootstrap support for Q5JE33 as seed ortholog is 100%.

Group of orthologs #3. Best score 599 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.kodakaraensis:599

H3B882              	100.00%		Q5JE98              	100.00%
H3AWB6              	56.15%		Q9V2X2              	54.02%
Bootstrap support for H3B882 as seed ortholog is 97%.
Bootstrap support for Q5JE98 as seed ortholog is 100%.

Group of orthologs #4. Best score 564 bits
Score difference with first non-orthologous sequence - L.chalumnae:564 P.kodakaraensis:564

H3AJG5              	100.00%		Q5JIR3              	100.00%
Bootstrap support for H3AJG5 as seed ortholog is 100%.
Bootstrap support for Q5JIR3 as seed ortholog is 100%.

Group of orthologs #5. Best score 549 bits
Score difference with first non-orthologous sequence - L.chalumnae:349 P.kodakaraensis:549

H3ATU0              	100.00%		Q5JIS8              	100.00%
Bootstrap support for H3ATU0 as seed ortholog is 100%.
Bootstrap support for Q5JIS8 as seed ortholog is 100%.

Group of orthologs #6. Best score 545 bits
Score difference with first non-orthologous sequence - L.chalumnae:545 P.kodakaraensis:545

H3AL63              	100.00%		Q5JIG4              	100.00%
Bootstrap support for H3AL63 as seed ortholog is 100%.
Bootstrap support for Q5JIG4 as seed ortholog is 100%.

Group of orthologs #7. Best score 523 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.kodakaraensis:256

H3BI03              	100.00%		Q5JJ31              	100.00%
Bootstrap support for H3BI03 as seed ortholog is 99%.
Bootstrap support for Q5JJ31 as seed ortholog is 99%.

Group of orthologs #8. Best score 509 bits
Score difference with first non-orthologous sequence - L.chalumnae:390 P.kodakaraensis:509

H3BB48              	100.00%		Q5JIR2              	100.00%
H3A405              	39.64%		
Bootstrap support for H3BB48 as seed ortholog is 100%.
Bootstrap support for Q5JIR2 as seed ortholog is 100%.

Group of orthologs #9. Best score 507 bits
Score difference with first non-orthologous sequence - L.chalumnae:388 P.kodakaraensis:507

H3B017              	100.00%		Q5JDX6              	100.00%
Bootstrap support for H3B017 as seed ortholog is 100%.
Bootstrap support for Q5JDX6 as seed ortholog is 100%.

Group of orthologs #10. Best score 502 bits
Score difference with first non-orthologous sequence - L.chalumnae:502 P.kodakaraensis:502

H3B2Y2              	100.00%		Q5JGF1              	100.00%
Bootstrap support for H3B2Y2 as seed ortholog is 100%.
Bootstrap support for Q5JGF1 as seed ortholog is 100%.

Group of orthologs #11. Best score 482 bits
Score difference with first non-orthologous sequence - L.chalumnae:314 P.kodakaraensis:482

H3A9P8              	100.00%		Q5JDF4              	100.00%
H3AWQ6              	13.90%		
Bootstrap support for H3A9P8 as seed ortholog is 100%.
Bootstrap support for Q5JDF4 as seed ortholog is 100%.

Group of orthologs #12. Best score 475 bits
Score difference with first non-orthologous sequence - L.chalumnae:335 P.kodakaraensis:373

H3ALQ7              	100.00%		Q8NKR7              	100.00%
Bootstrap support for H3ALQ7 as seed ortholog is 100%.
Bootstrap support for Q8NKR7 as seed ortholog is 100%.

Group of orthologs #13. Best score 463 bits
Score difference with first non-orthologous sequence - L.chalumnae:463 P.kodakaraensis:463

H3AYT4              	100.00%		Q5JCZ1              	100.00%
Bootstrap support for H3AYT4 as seed ortholog is 100%.
Bootstrap support for Q5JCZ1 as seed ortholog is 100%.

Group of orthologs #14. Best score 458 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.kodakaraensis:458

H3A6N0              	100.00%		Q5JFZ3              	100.00%
H3ASK6              	100.00%		
H3AYF8              	13.26%		
H3B8T1              	5.37%		
Bootstrap support for H3A6N0 as seed ortholog is 99%.
Bootstrap support for H3ASK6 as seed ortholog is 99%.
Bootstrap support for Q5JFZ3 as seed ortholog is 100%.

Group of orthologs #15. Best score 452 bits
Score difference with first non-orthologous sequence - L.chalumnae:189 P.kodakaraensis:452

H3B696              	100.00%		Q5JFZ4              	100.00%
H3A0X9              	71.54%		
H3B6F8              	63.93%		
H3A468              	48.30%		
H3A5A9              	32.26%		
Bootstrap support for H3B696 as seed ortholog is 99%.
Bootstrap support for Q5JFZ4 as seed ortholog is 100%.

Group of orthologs #16. Best score 451 bits
Score difference with first non-orthologous sequence - L.chalumnae:325 P.kodakaraensis:375

H3B528              	100.00%		Q5JEV6              	100.00%
H3B7K3              	72.33%		
H2ZXR3              	43.69%		
Bootstrap support for H3B528 as seed ortholog is 100%.
Bootstrap support for Q5JEV6 as seed ortholog is 100%.

Group of orthologs #17. Best score 403 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.kodakaraensis:403

H3BBH3              	100.00%		O93623              	100.00%
Bootstrap support for H3BBH3 as seed ortholog is 90%.
Bootstrap support for O93623 as seed ortholog is 100%.

Group of orthologs #18. Best score 402 bits
Score difference with first non-orthologous sequence - L.chalumnae:11 P.kodakaraensis:402

H3BFD1              	100.00%		Q52500              	100.00%
                    	       		P61111              	71.77%
Bootstrap support for H3BFD1 as seed ortholog is 59%.
Alternative seed ortholog is H2ZYP0 (11 bits away from this cluster)
Bootstrap support for Q52500 as seed ortholog is 100%.

Group of orthologs #19. Best score 400 bits
Score difference with first non-orthologous sequence - L.chalumnae:28 P.kodakaraensis:400

H2ZU93              	100.00%		Q5JJA2              	100.00%
H3B892              	47.10%		
Bootstrap support for H2ZU93 as seed ortholog is 70%.
Alternative seed ortholog is H3AP88 (28 bits away from this cluster)
Bootstrap support for Q5JJA2 as seed ortholog is 100%.

Group of orthologs #20. Best score 393 bits
Score difference with first non-orthologous sequence - L.chalumnae:393 P.kodakaraensis:393

H3BG06              	100.00%		Q5JH71              	100.00%
H3A6Q5              	60.02%		
H3B5P0              	58.10%		
Bootstrap support for H3BG06 as seed ortholog is 100%.
Bootstrap support for Q5JH71 as seed ortholog is 100%.

Group of orthologs #21. Best score 392 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.kodakaraensis:392

H3BEP4              	100.00%		Q5JGE5              	100.00%
Bootstrap support for H3BEP4 as seed ortholog is 98%.
Bootstrap support for Q5JGE5 as seed ortholog is 100%.

Group of orthologs #22. Best score 385 bits
Score difference with first non-orthologous sequence - L.chalumnae:216 P.kodakaraensis:385

H3BHT6              	100.00%		Q5JDZ7              	100.00%
Bootstrap support for H3BHT6 as seed ortholog is 99%.
Bootstrap support for Q5JDZ7 as seed ortholog is 100%.

Group of orthologs #23. Best score 366 bits
Score difference with first non-orthologous sequence - L.chalumnae:12 P.kodakaraensis:366

H3AQX3              	100.00%		Q5JHS5              	100.00%
Bootstrap support for H3AQX3 as seed ortholog is 65%.
Alternative seed ortholog is H3BIM2 (12 bits away from this cluster)
Bootstrap support for Q5JHS5 as seed ortholog is 100%.

Group of orthologs #24. Best score 366 bits
Score difference with first non-orthologous sequence - L.chalumnae:366 P.kodakaraensis:366

H3BEP0              	100.00%		Q5JJC8              	100.00%
Bootstrap support for H3BEP0 as seed ortholog is 100%.
Bootstrap support for Q5JJC8 as seed ortholog is 100%.

Group of orthologs #25. Best score 352 bits
Score difference with first non-orthologous sequence - L.chalumnae:25 P.kodakaraensis:352

H3B172              	100.00%		Q5JIT1              	100.00%
Bootstrap support for H3B172 as seed ortholog is 68%.
Alternative seed ortholog is H3AS78 (25 bits away from this cluster)
Bootstrap support for Q5JIT1 as seed ortholog is 100%.

Group of orthologs #26. Best score 351 bits
Score difference with first non-orthologous sequence - L.chalumnae:219 P.kodakaraensis:351

H2ZXA7              	100.00%		Q5JDL3              	100.00%
Bootstrap support for H2ZXA7 as seed ortholog is 100%.
Bootstrap support for Q5JDL3 as seed ortholog is 100%.

Group of orthologs #27. Best score 332 bits
Score difference with first non-orthologous sequence - L.chalumnae:332 P.kodakaraensis:268

H3A0G7              	100.00%		Q5JID8              	100.00%
Bootstrap support for H3A0G7 as seed ortholog is 100%.
Bootstrap support for Q5JID8 as seed ortholog is 100%.

Group of orthologs #28. Best score 328 bits
Score difference with first non-orthologous sequence - L.chalumnae:328 P.kodakaraensis:328

H3BIH2              	100.00%		Q5JED2              	100.00%
M3XHX9              	19.10%		
M3XH88              	18.96%		
Bootstrap support for H3BIH2 as seed ortholog is 100%.
Bootstrap support for Q5JED2 as seed ortholog is 100%.

Group of orthologs #29. Best score 312 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 P.kodakaraensis:312

H3AIF6              	100.00%		Q5JD45              	100.00%
Bootstrap support for H3AIF6 as seed ortholog is 100%.
Bootstrap support for Q5JD45 as seed ortholog is 100%.

Group of orthologs #30. Best score 305 bits
Score difference with first non-orthologous sequence - L.chalumnae:305 P.kodakaraensis:305

H3ATJ8              	100.00%		Q76I93              	100.00%
H3AAG4              	65.54%		
Bootstrap support for H3ATJ8 as seed ortholog is 100%.
Bootstrap support for Q76I93 as seed ortholog is 100%.

Group of orthologs #31. Best score 295 bits
Score difference with first non-orthologous sequence - L.chalumnae:295 P.kodakaraensis:295

H3A587              	100.00%		Q5JFN4              	100.00%
Bootstrap support for H3A587 as seed ortholog is 100%.
Bootstrap support for Q5JFN4 as seed ortholog is 100%.

Group of orthologs #32. Best score 293 bits
Score difference with first non-orthologous sequence - L.chalumnae:293 P.kodakaraensis:293

H3AD90              	100.00%		Q5JIQ2              	100.00%
Bootstrap support for H3AD90 as seed ortholog is 100%.
Bootstrap support for Q5JIQ2 as seed ortholog is 100%.

Group of orthologs #33. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:292 P.kodakaraensis:292

H3BGX8              	100.00%		Q5JIF8              	100.00%
Bootstrap support for H3BGX8 as seed ortholog is 100%.
Bootstrap support for Q5JIF8 as seed ortholog is 100%.

Group of orthologs #34. Best score 290 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 P.kodakaraensis:290

H3AJZ4              	100.00%		Q5JEW3              	100.00%
Bootstrap support for H3AJZ4 as seed ortholog is 100%.
Bootstrap support for Q5JEW3 as seed ortholog is 100%.

Group of orthologs #35. Best score 289 bits
Score difference with first non-orthologous sequence - L.chalumnae:289 P.kodakaraensis:289

H3ADM5              	100.00%		Q5JIP3              	100.00%
Bootstrap support for H3ADM5 as seed ortholog is 100%.
Bootstrap support for Q5JIP3 as seed ortholog is 100%.

Group of orthologs #36. Best score 282 bits
Score difference with first non-orthologous sequence - L.chalumnae:282 P.kodakaraensis:135

H3ARM7              	100.00%		Q5JHX4              	100.00%
H3ASB6              	42.84%		
Bootstrap support for H3ARM7 as seed ortholog is 100%.
Bootstrap support for Q5JHX4 as seed ortholog is 40%.
Alternative seed ortholog is Q5JHB9 (135 bits away from this cluster)

Group of orthologs #37. Best score 278 bits
Score difference with first non-orthologous sequence - L.chalumnae:278 P.kodakaraensis:165

H3B664              	100.00%		Q5JI16              	100.00%
Bootstrap support for H3B664 as seed ortholog is 100%.
Bootstrap support for Q5JI16 as seed ortholog is 100%.

Group of orthologs #38. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 P.kodakaraensis:277

H3A1Z2              	100.00%		Q5JEP3              	100.00%
Bootstrap support for H3A1Z2 as seed ortholog is 100%.
Bootstrap support for Q5JEP3 as seed ortholog is 100%.

Group of orthologs #39. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.kodakaraensis:277

H3BBS2              	100.00%		Q5JHC1              	100.00%
Bootstrap support for H3BBS2 as seed ortholog is 99%.
Bootstrap support for Q5JHC1 as seed ortholog is 100%.

Group of orthologs #40. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:270 P.kodakaraensis:270

H3BAN6              	100.00%		Q5JJH1              	100.00%
H3AXW8              	53.83%		
Bootstrap support for H3BAN6 as seed ortholog is 100%.
Bootstrap support for Q5JJH1 as seed ortholog is 100%.

Group of orthologs #41. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 P.kodakaraensis:270

H3ANZ0              	100.00%		Q52428              	100.00%
Bootstrap support for H3ANZ0 as seed ortholog is 99%.
Bootstrap support for Q52428 as seed ortholog is 100%.

Group of orthologs #42. Best score 268 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.kodakaraensis:268

H3AB97              	100.00%		Q5JHX1              	100.00%
Bootstrap support for H3AB97 as seed ortholog is 99%.
Bootstrap support for Q5JHX1 as seed ortholog is 100%.

Group of orthologs #43. Best score 267 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.kodakaraensis:267

H3AIE0              	100.00%		Q5JFM0              	100.00%
H3A423              	54.21%		
Bootstrap support for H3AIE0 as seed ortholog is 99%.
Bootstrap support for Q5JFM0 as seed ortholog is 100%.

Group of orthologs #44. Best score 267 bits
Score difference with first non-orthologous sequence - L.chalumnae:267 P.kodakaraensis:267

H3ASP8              	100.00%		Q5JEY0              	100.00%
Bootstrap support for H3ASP8 as seed ortholog is 100%.
Bootstrap support for Q5JEY0 as seed ortholog is 100%.

Group of orthologs #45. Best score 263 bits
Score difference with first non-orthologous sequence - L.chalumnae:7 P.kodakaraensis:263

H2ZRV2              	100.00%		Q5JFZ6              	100.00%
H3BEF1              	51.67%		
H3A1W8              	51.11%		
H3A6E9              	50.37%		
Bootstrap support for H2ZRV2 as seed ortholog is 56%.
Alternative seed ortholog is H3B1B6 (7 bits away from this cluster)
Bootstrap support for Q5JFZ6 as seed ortholog is 100%.

Group of orthologs #46. Best score 260 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.kodakaraensis:260

H3B206              	100.00%		Q5JJE8              	100.00%
Bootstrap support for H3B206 as seed ortholog is 100%.
Bootstrap support for Q5JJE8 as seed ortholog is 100%.

Group of orthologs #47. Best score 256 bits
Score difference with first non-orthologous sequence - L.chalumnae:256 P.kodakaraensis:210

H3A5F9              	100.00%		Q5JGK6              	100.00%
Bootstrap support for H3A5F9 as seed ortholog is 100%.
Bootstrap support for Q5JGK6 as seed ortholog is 100%.

Group of orthologs #48. Best score 249 bits
Score difference with first non-orthologous sequence - L.chalumnae:19 P.kodakaraensis:249

H2ZSB7              	100.00%		Q5JHP3              	100.00%
Bootstrap support for H2ZSB7 as seed ortholog is 32%.
Alternative seed ortholog is H3B343 (19 bits away from this cluster)
Bootstrap support for Q5JHP3 as seed ortholog is 100%.

Group of orthologs #49. Best score 249 bits
Score difference with first non-orthologous sequence - L.chalumnae:249 P.kodakaraensis:249

H3A6E7              	100.00%		Q5JHC6              	100.00%
Bootstrap support for H3A6E7 as seed ortholog is 100%.
Bootstrap support for Q5JHC6 as seed ortholog is 100%.

Group of orthologs #50. Best score 249 bits
Score difference with first non-orthologous sequence - L.chalumnae:249 P.kodakaraensis:249

H3AD65              	100.00%		O59650              	100.00%
Bootstrap support for H3AD65 as seed ortholog is 100%.
Bootstrap support for O59650 as seed ortholog is 100%.

Group of orthologs #51. Best score 247 bits
Score difference with first non-orthologous sequence - L.chalumnae:22 P.kodakaraensis:247

H3BBZ5              	100.00%		Q5JET4              	100.00%
Bootstrap support for H3BBZ5 as seed ortholog is 70%.
Alternative seed ortholog is M3XJN0 (22 bits away from this cluster)
Bootstrap support for Q5JET4 as seed ortholog is 100%.

Group of orthologs #52. Best score 245 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.kodakaraensis:245

H3B0T2              	100.00%		Q5JFK3              	100.00%
H3BHL8              	100.00%		
Bootstrap support for H3B0T2 as seed ortholog is 78%.
Bootstrap support for H3BHL8 as seed ortholog is 81%.
Bootstrap support for Q5JFK3 as seed ortholog is 100%.

Group of orthologs #53. Best score 245 bits
Score difference with first non-orthologous sequence - L.chalumnae:245 P.kodakaraensis:245

H2ZZN4              	100.00%		Q76KA7              	100.00%
Bootstrap support for H2ZZN4 as seed ortholog is 100%.
Bootstrap support for Q76KA7 as seed ortholog is 100%.

Group of orthologs #54. Best score 243 bits
Score difference with first non-orthologous sequence - L.chalumnae:243 P.kodakaraensis:122

H3ADK8              	100.00%		Q5JF43              	100.00%
Bootstrap support for H3ADK8 as seed ortholog is 100%.
Bootstrap support for Q5JF43 as seed ortholog is 99%.

Group of orthologs #55. Best score 239 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.kodakaraensis:92

H3ALK7              	100.00%		Q5JCX7              	100.00%
M3XL51              	42.32%		
H3AD17              	12.85%		
Bootstrap support for H3ALK7 as seed ortholog is 99%.
Bootstrap support for Q5JCX7 as seed ortholog is 99%.

Group of orthologs #56. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:5 P.kodakaraensis:232

H3AXB1              	100.00%		Q5JJ64              	100.00%
H3AUJ8              	15.83%		
M3XLM0              	8.87%		
Bootstrap support for H3AXB1 as seed ortholog is 54%.
Alternative seed ortholog is H3AQG0 (5 bits away from this cluster)
Bootstrap support for Q5JJ64 as seed ortholog is 100%.

Group of orthologs #57. Best score 231 bits
Score difference with first non-orthologous sequence - L.chalumnae:231 P.kodakaraensis:231

H3AKB8              	100.00%		Q5JE24              	100.00%
H3B0D1              	6.49%		
Bootstrap support for H3AKB8 as seed ortholog is 100%.
Bootstrap support for Q5JE24 as seed ortholog is 100%.

Group of orthologs #58. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 P.kodakaraensis:230

H3B6I7              	100.00%		Q5JFW3              	100.00%
Bootstrap support for H3B6I7 as seed ortholog is 99%.
Bootstrap support for Q5JFW3 as seed ortholog is 100%.

Group of orthologs #59. Best score 225 bits
Score difference with first non-orthologous sequence - L.chalumnae:8 P.kodakaraensis:225

H3AH67              	100.00%		Q5JEZ2              	100.00%
H3A6U3              	32.10%		Q5JF48              	7.80%
                    	       		Q5JGC4              	5.28%
Bootstrap support for H3AH67 as seed ortholog is 41%.
Alternative seed ortholog is H2ZZ92 (8 bits away from this cluster)
Bootstrap support for Q5JEZ2 as seed ortholog is 100%.

Group of orthologs #60. Best score 225 bits
Score difference with first non-orthologous sequence - L.chalumnae:225 P.kodakaraensis:225

H3BBC2              	100.00%		Q5JGQ7              	100.00%
H3B5H5              	36.27%		
Bootstrap support for H3BBC2 as seed ortholog is 100%.
Bootstrap support for Q5JGQ7 as seed ortholog is 100%.

Group of orthologs #61. Best score 224 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 P.kodakaraensis:224

H3ARN5              	100.00%		Q5JGV6              	100.00%
Bootstrap support for H3ARN5 as seed ortholog is 55%.
Alternative seed ortholog is H3B5Z7 (36 bits away from this cluster)
Bootstrap support for Q5JGV6 as seed ortholog is 100%.

Group of orthologs #62. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 P.kodakaraensis:223

H3BEX7              	100.00%		Q6F494              	100.00%
H3AIG6              	62.36%		
Bootstrap support for H3BEX7 as seed ortholog is 100%.
Bootstrap support for Q6F494 as seed ortholog is 100%.

Group of orthologs #63. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 P.kodakaraensis:223

H3B9L1              	100.00%		Q5JDJ5              	100.00%
Bootstrap support for H3B9L1 as seed ortholog is 100%.
Bootstrap support for Q5JDJ5 as seed ortholog is 100%.

Group of orthologs #64. Best score 222 bits
Score difference with first non-orthologous sequence - L.chalumnae:222 P.kodakaraensis:222

H2ZWI0              	100.00%		Q5JGN0              	100.00%
H3AI16              	9.64%		
Bootstrap support for H2ZWI0 as seed ortholog is 100%.
Bootstrap support for Q5JGN0 as seed ortholog is 100%.

Group of orthologs #65. Best score 221 bits
Score difference with first non-orthologous sequence - L.chalumnae:221 P.kodakaraensis:221

H3A2M7              	100.00%		Q5JD37              	100.00%
H3A6J3              	61.43%		
Bootstrap support for H3A2M7 as seed ortholog is 100%.
Bootstrap support for Q5JD37 as seed ortholog is 100%.

Group of orthologs #66. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.kodakaraensis:220

H3A561              	100.00%		Q5JG59              	100.00%
H3AEA3              	7.59%		
H3ATS6              	6.08%		
Bootstrap support for H3A561 as seed ortholog is 85%.
Bootstrap support for Q5JG59 as seed ortholog is 100%.

Group of orthologs #67. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 P.kodakaraensis:218

H3ADI2              	100.00%		Q5JDH2              	100.00%
H3AA59              	14.38%		
Bootstrap support for H3ADI2 as seed ortholog is 100%.
Bootstrap support for Q5JDH2 as seed ortholog is 100%.

Group of orthologs #68. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:217 P.kodakaraensis:217

H3BEB0              	100.00%		Q5JF74              	100.00%
Bootstrap support for H3BEB0 as seed ortholog is 100%.
Bootstrap support for Q5JF74 as seed ortholog is 100%.

Group of orthologs #69. Best score 216 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 P.kodakaraensis:216

H3B0X3              	100.00%		Q5JEK8              	100.00%
Bootstrap support for H3B0X3 as seed ortholog is 99%.
Bootstrap support for Q5JEK8 as seed ortholog is 100%.

Group of orthologs #70. Best score 213 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.kodakaraensis:213

H3A3S4              	100.00%		Q5JEW1              	100.00%
H3B5G2              	100.00%		Q5JGG6              	100.00%
H3B626              	49.88%		
Bootstrap support for H3A3S4 as seed ortholog is 96%.
Bootstrap support for H3B5G2 as seed ortholog is 94%.
Bootstrap support for Q5JEW1 as seed ortholog is 100%.
Bootstrap support for Q5JGG6 as seed ortholog is 100%.

Group of orthologs #71. Best score 212 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.kodakaraensis:212

H3AW53              	100.00%		Q5JJ82              	100.00%
Bootstrap support for H3AW53 as seed ortholog is 99%.
Bootstrap support for Q5JJ82 as seed ortholog is 100%.

Group of orthologs #72. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 P.kodakaraensis:208

H2ZW51              	100.00%		Q5JGF4              	100.00%
Bootstrap support for H2ZW51 as seed ortholog is 100%.
Bootstrap support for Q5JGF4 as seed ortholog is 100%.

Group of orthologs #73. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 P.kodakaraensis:208

H3B666              	100.00%		P77933              	100.00%
Bootstrap support for H3B666 as seed ortholog is 100%.
Bootstrap support for P77933 as seed ortholog is 100%.

Group of orthologs #74. Best score 207 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 P.kodakaraensis:207

H3AXY9              	100.00%		Q5JDJ0              	100.00%
H3ABQ3              	68.99%		
Bootstrap support for H3AXY9 as seed ortholog is 100%.
Bootstrap support for Q5JDJ0 as seed ortholog is 100%.

Group of orthologs #75. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 P.kodakaraensis:205

H3AGN3              	100.00%		Q5JID0              	100.00%
H3AVK1              	32.92%		
H2ZXB4              	31.57%		
H3AYB3              	29.72%		
H3B3T8              	29.72%		
H3A4V9              	27.74%		
H2ZSX7              	25.40%		
H3BDV8              	5.30%		
Bootstrap support for H3AGN3 as seed ortholog is 100%.
Bootstrap support for Q5JID0 as seed ortholog is 100%.

Group of orthologs #76. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:203 P.kodakaraensis:203

H3A782              	100.00%		Q5JIL7              	100.00%
H3BBM8              	13.16%		
Bootstrap support for H3A782 as seed ortholog is 100%.
Bootstrap support for Q5JIL7 as seed ortholog is 100%.

Group of orthologs #77. Best score 202 bits
Score difference with first non-orthologous sequence - L.chalumnae:202 P.kodakaraensis:58

H3A550              	100.00%		Q5JGG2              	100.00%
Bootstrap support for H3A550 as seed ortholog is 100%.
Bootstrap support for Q5JGG2 as seed ortholog is 92%.

Group of orthologs #78. Best score 202 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.kodakaraensis:202

H3AF98              	100.00%		Q5JG47              	100.00%
Bootstrap support for H3AF98 as seed ortholog is 98%.
Bootstrap support for Q5JG47 as seed ortholog is 100%.

Group of orthologs #79. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:201 P.kodakaraensis:201

H3A886              	100.00%		Q5JGE1              	100.00%
Bootstrap support for H3A886 as seed ortholog is 100%.
Bootstrap support for Q5JGE1 as seed ortholog is 100%.

Group of orthologs #80. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.kodakaraensis:201

H3B0V1              	100.00%		Q5JIQ0              	100.00%
Bootstrap support for H3B0V1 as seed ortholog is 99%.
Bootstrap support for Q5JIQ0 as seed ortholog is 100%.

Group of orthologs #81. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:28 P.kodakaraensis:198

H3A3Y8              	100.00%		Q5JEP5              	100.00%
Bootstrap support for H3A3Y8 as seed ortholog is 84%.
Bootstrap support for Q5JEP5 as seed ortholog is 100%.

Group of orthologs #82. Best score 197 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 P.kodakaraensis:197

H2ZZ12              	100.00%		Q5JH48              	100.00%
Bootstrap support for H2ZZ12 as seed ortholog is 100%.
Bootstrap support for Q5JH48 as seed ortholog is 100%.

Group of orthologs #83. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 P.kodakaraensis:196

H3ARG8              	100.00%		Q5JGG5              	100.00%
H3AEU6              	62.02%		
H2ZUS3              	19.94%		
H3B854              	8.32%		
Bootstrap support for H3ARG8 as seed ortholog is 100%.
Bootstrap support for Q5JGG5 as seed ortholog is 100%.

Group of orthologs #84. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:17 P.kodakaraensis:196

H3AU52              	100.00%		Q5JIU9              	100.00%
H3A6D9              	47.44%		
Bootstrap support for H3AU52 as seed ortholog is 43%.
Alternative seed ortholog is H3B881 (17 bits away from this cluster)
Bootstrap support for Q5JIU9 as seed ortholog is 100%.

Group of orthologs #85. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.kodakaraensis:196

H2ZWD9              	100.00%		Q5JHT1              	100.00%
Bootstrap support for H2ZWD9 as seed ortholog is 96%.
Bootstrap support for Q5JHT1 as seed ortholog is 100%.

Group of orthologs #86. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.kodakaraensis:143

H3A1D0              	100.00%		Q5JFM8              	100.00%
Bootstrap support for H3A1D0 as seed ortholog is 99%.
Bootstrap support for Q5JFM8 as seed ortholog is 99%.

Group of orthologs #87. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:13 P.kodakaraensis:90

H3A6N9              	100.00%		Q5JDD8              	100.00%
Bootstrap support for H3A6N9 as seed ortholog is 66%.
Alternative seed ortholog is H3B108 (13 bits away from this cluster)
Bootstrap support for Q5JDD8 as seed ortholog is 99%.

Group of orthologs #88. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.kodakaraensis:136

H3AMZ6              	100.00%		Q5JF51              	100.00%
H3B744              	46.71%		Q5JHU0              	26.37%
                    	       		Q5JE21              	9.42%
Bootstrap support for H3AMZ6 as seed ortholog is 97%.
Bootstrap support for Q5JF51 as seed ortholog is 99%.

Group of orthologs #89. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.kodakaraensis:186

H3BG71              	100.00%		Q5JDV8              	100.00%
                    	       		Q5JIM8              	6.53%
Bootstrap support for H3BG71 as seed ortholog is 99%.
Bootstrap support for Q5JDV8 as seed ortholog is 100%.

Group of orthologs #90. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 P.kodakaraensis:185

H2ZWW5              	100.00%		Q5JIM2              	100.00%
H3A060              	8.73%		
Bootstrap support for H2ZWW5 as seed ortholog is 100%.
Bootstrap support for Q5JIM2 as seed ortholog is 100%.

Group of orthologs #91. Best score 182 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.kodakaraensis:182

H3AYY5              	100.00%		Q5JFW9              	100.00%
M3XHU7              	63.69%		
Bootstrap support for H3AYY5 as seed ortholog is 99%.
Bootstrap support for Q5JFW9 as seed ortholog is 100%.

Group of orthologs #92. Best score 182 bits
Score difference with first non-orthologous sequence - L.chalumnae:182 P.kodakaraensis:182

H3BGA5              	100.00%		Q5JE75              	100.00%
Bootstrap support for H3BGA5 as seed ortholog is 100%.
Bootstrap support for Q5JE75 as seed ortholog is 100%.

Group of orthologs #93. Best score 181 bits
Score difference with first non-orthologous sequence - L.chalumnae:181 P.kodakaraensis:181

H3A7L7              	100.00%		Q5JFV8              	100.00%
H3AFA1              	21.17%		
H3AHE6              	16.24%		
M3XIQ8              	15.88%		
Bootstrap support for H3A7L7 as seed ortholog is 100%.
Bootstrap support for Q5JFV8 as seed ortholog is 100%.

Group of orthologs #94. Best score 181 bits
Score difference with first non-orthologous sequence - L.chalumnae:181 P.kodakaraensis:181

H3AIE9              	100.00%		Q5JH24              	100.00%
H3BHM8              	5.67%		
Bootstrap support for H3AIE9 as seed ortholog is 100%.
Bootstrap support for Q5JH24 as seed ortholog is 100%.

Group of orthologs #95. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 P.kodakaraensis:180

H3AR85              	100.00%		Q5JG03              	100.00%
Bootstrap support for H3AR85 as seed ortholog is 100%.
Bootstrap support for Q5JG03 as seed ortholog is 100%.

Group of orthologs #96. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:179 P.kodakaraensis:179

H3A9R5              	100.00%		Q5JH16              	100.00%
Bootstrap support for H3A9R5 as seed ortholog is 100%.
Bootstrap support for Q5JH16 as seed ortholog is 100%.

Group of orthologs #97. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.kodakaraensis:178

H3B4S4              	100.00%		Q5JFN0              	100.00%
H3AT53              	11.32%		
Bootstrap support for H3B4S4 as seed ortholog is 99%.
Bootstrap support for Q5JFN0 as seed ortholog is 100%.

Group of orthologs #98. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.kodakaraensis:178

H2ZXM1              	100.00%		Q5JH43              	100.00%
Bootstrap support for H2ZXM1 as seed ortholog is 100%.
Bootstrap support for Q5JH43 as seed ortholog is 100%.

Group of orthologs #99. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.kodakaraensis:175

H3B8Y2              	100.00%		Q5JJF3              	100.00%
H3A5G2              	26.32%		
Bootstrap support for H3B8Y2 as seed ortholog is 99%.
Bootstrap support for Q5JJF3 as seed ortholog is 100%.

Group of orthologs #100. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 P.kodakaraensis:175

H3ABL2              	100.00%		Q5JFE7              	100.00%
Bootstrap support for H3ABL2 as seed ortholog is 100%.
Bootstrap support for Q5JFE7 as seed ortholog is 100%.

Group of orthologs #101. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 P.kodakaraensis:175

H3AYK6              	100.00%		Q5JIG7              	100.00%
Bootstrap support for H3AYK6 as seed ortholog is 100%.
Bootstrap support for Q5JIG7 as seed ortholog is 100%.

Group of orthologs #102. Best score 174 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.kodakaraensis:174

H3A5A8              	100.00%		Q5JEZ9              	100.00%
H3AJ22              	19.45%		
H3BEA5              	17.51%		
H3B2B9              	16.46%		
H3B1R8              	15.25%		
H2ZRX0              	10.41%		
Bootstrap support for H3A5A8 as seed ortholog is 89%.
Bootstrap support for Q5JEZ9 as seed ortholog is 100%.

Group of orthologs #103. Best score 174 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.kodakaraensis:63

H3A703              	100.00%		Q5JI97              	100.00%
H3AGB5              	6.85%		
Bootstrap support for H3A703 as seed ortholog is 99%.
Bootstrap support for Q5JI97 as seed ortholog is 93%.

Group of orthologs #104. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.kodakaraensis:173

H3AND8              	100.00%		Q5JF06              	100.00%
H3BII8              	48.15%		
Bootstrap support for H3AND8 as seed ortholog is 100%.
Bootstrap support for Q5JF06 as seed ortholog is 100%.

Group of orthologs #105. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.kodakaraensis:172

H3ALU6              	100.00%		Q5JGN1              	100.00%
                    	       		P58109              	57.73%
Bootstrap support for H3ALU6 as seed ortholog is 94%.
Bootstrap support for Q5JGN1 as seed ortholog is 100%.

Group of orthologs #106. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 P.kodakaraensis:172

H3AEC4              	100.00%		Q5JFX8              	100.00%
Bootstrap support for H3AEC4 as seed ortholog is 100%.
Bootstrap support for Q5JFX8 as seed ortholog is 100%.

Group of orthologs #107. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:38 P.kodakaraensis:171

H3AK78              	100.00%		Q5JE76              	100.00%
H2ZS69              	76.45%		
H3ARL4              	7.23%		
Bootstrap support for H3AK78 as seed ortholog is 88%.
Bootstrap support for Q5JE76 as seed ortholog is 100%.

Group of orthologs #108. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 P.kodakaraensis:171

H2ZYP6              	100.00%		Q5JE34              	100.00%
Bootstrap support for H2ZYP6 as seed ortholog is 100%.
Bootstrap support for Q5JE34 as seed ortholog is 100%.

Group of orthologs #109. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.kodakaraensis:170

H3A050              	100.00%		Q5JGD1              	100.00%
Bootstrap support for H3A050 as seed ortholog is 97%.
Bootstrap support for Q5JGD1 as seed ortholog is 100%.

Group of orthologs #110. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.kodakaraensis:170

H2ZYY0              	100.00%		Q5JI69              	100.00%
Bootstrap support for H2ZYY0 as seed ortholog is 99%.
Bootstrap support for Q5JI69 as seed ortholog is 100%.

Group of orthologs #111. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.kodakaraensis:168

H2ZYA8              	100.00%		Q5JIE6              	100.00%
H3BDJ1              	58.12%		
H3AR52              	53.02%		
Bootstrap support for H2ZYA8 as seed ortholog is 100%.
Bootstrap support for Q5JIE6 as seed ortholog is 100%.

Group of orthologs #112. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.kodakaraensis:168

H3B804              	100.00%		Q5JDV2              	100.00%
H3A823              	33.37%		
Bootstrap support for H3B804 as seed ortholog is 100%.
Bootstrap support for Q5JDV2 as seed ortholog is 100%.

Group of orthologs #113. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.kodakaraensis:165

H3B6D4              	100.00%		Q5JEW7              	100.00%
Bootstrap support for H3B6D4 as seed ortholog is 98%.
Bootstrap support for Q5JEW7 as seed ortholog is 100%.

Group of orthologs #114. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 P.kodakaraensis:163

H3A217              	100.00%		Q9HHC4              	100.00%
Bootstrap support for H3A217 as seed ortholog is 100%.
Bootstrap support for Q9HHC4 as seed ortholog is 100%.

Group of orthologs #115. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.kodakaraensis:163

H3AIV7              	100.00%		Q5JIB3              	100.00%
Bootstrap support for H3AIV7 as seed ortholog is 88%.
Bootstrap support for Q5JIB3 as seed ortholog is 100%.

Group of orthologs #116. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.kodakaraensis:161

H3ASQ7              	100.00%		Q5JF26              	100.00%
                    	       		Q5JGM9              	19.48%
Bootstrap support for H3ASQ7 as seed ortholog is 100%.
Bootstrap support for Q5JF26 as seed ortholog is 100%.

Group of orthologs #117. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.kodakaraensis:161

H3AQL2              	100.00%		Q5JJG1              	100.00%
Bootstrap support for H3AQL2 as seed ortholog is 100%.
Bootstrap support for Q5JJG1 as seed ortholog is 100%.

Group of orthologs #118. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 P.kodakaraensis:159

H3ABN2              	100.00%		Q5JDI0              	100.00%
Bootstrap support for H3ABN2 as seed ortholog is 100%.
Bootstrap support for Q5JDI0 as seed ortholog is 100%.

Group of orthologs #119. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 P.kodakaraensis:158

H3AY36              	100.00%		Q5JCX3              	100.00%
Bootstrap support for H3AY36 as seed ortholog is 100%.
Bootstrap support for Q5JCX3 as seed ortholog is 100%.

Group of orthologs #120. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.kodakaraensis:112

H2ZYP3              	100.00%		Q5JFR0              	100.00%
Bootstrap support for H2ZYP3 as seed ortholog is 100%.
Bootstrap support for Q5JFR0 as seed ortholog is 99%.

Group of orthologs #121. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.kodakaraensis:156

H3A155              	100.00%		Q5JJD2              	100.00%
Bootstrap support for H3A155 as seed ortholog is 100%.
Bootstrap support for Q5JJD2 as seed ortholog is 100%.

Group of orthologs #122. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.kodakaraensis:156

H3B6A3              	100.00%		Q5JDG3              	100.00%
Bootstrap support for H3B6A3 as seed ortholog is 100%.
Bootstrap support for Q5JDG3 as seed ortholog is 100%.

Group of orthologs #123. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 P.kodakaraensis:155

H3ANS2              	100.00%		Q5JE04              	100.00%
Bootstrap support for H3ANS2 as seed ortholog is 100%.
Bootstrap support for Q5JE04 as seed ortholog is 100%.

Group of orthologs #124. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.kodakaraensis:155

H3B751              	100.00%		Q5JE20              	100.00%
Bootstrap support for H3B751 as seed ortholog is 99%.
Bootstrap support for Q5JE20 as seed ortholog is 100%.

Group of orthologs #125. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.kodakaraensis:153

H2ZYQ9              	100.00%		Q5JF38              	100.00%
Bootstrap support for H2ZYQ9 as seed ortholog is 97%.
Bootstrap support for Q5JF38 as seed ortholog is 100%.

Group of orthologs #126. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.kodakaraensis:153

H3AZH8              	100.00%		Q5JJG8              	100.00%
Bootstrap support for H3AZH8 as seed ortholog is 100%.
Bootstrap support for Q5JJG8 as seed ortholog is 100%.

Group of orthologs #127. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.kodakaraensis:151

H3A141              	100.00%		Q5JJG0              	100.00%
H3B7R6              	18.65%		
Bootstrap support for H3A141 as seed ortholog is 100%.
Bootstrap support for Q5JJG0 as seed ortholog is 100%.

Group of orthologs #128. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.kodakaraensis:151

H3AEV9              	100.00%		Q5JI50              	100.00%
Bootstrap support for H3AEV9 as seed ortholog is 100%.
Bootstrap support for Q5JI50 as seed ortholog is 100%.

Group of orthologs #129. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:11 P.kodakaraensis:151

H3AMG3              	100.00%		Q5JIR7              	100.00%
Bootstrap support for H3AMG3 as seed ortholog is 70%.
Alternative seed ortholog is H3AVN9 (11 bits away from this cluster)
Bootstrap support for Q5JIR7 as seed ortholog is 100%.

Group of orthologs #130. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.kodakaraensis:149

H3AA08              	100.00%		Q5JGR7              	100.00%
H3BEM9              	26.60%		
H3AYT5              	12.32%		
Bootstrap support for H3AA08 as seed ortholog is 99%.
Bootstrap support for Q5JGR7 as seed ortholog is 100%.

Group of orthologs #131. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:27 P.kodakaraensis:147

H3A640              	100.00%		Q5JH68              	100.00%
H2ZV67              	44.37%		
Bootstrap support for H3A640 as seed ortholog is 83%.
Bootstrap support for Q5JH68 as seed ortholog is 100%.

Group of orthologs #132. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:32 P.kodakaraensis:147

H3ASC2              	100.00%		Q5JIH2              	100.00%
H3AV21              	12.23%		
Bootstrap support for H3ASC2 as seed ortholog is 76%.
Bootstrap support for Q5JIH2 as seed ortholog is 100%.

Group of orthologs #133. Best score 145 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.kodakaraensis:145

H3A0Q2              	100.00%		Q5JI09              	100.00%
H3ANZ8              	10.94%		
H3AY00              	5.79%		
H3BE97              	5.36%		
Bootstrap support for H3A0Q2 as seed ortholog is 97%.
Bootstrap support for Q5JI09 as seed ortholog is 100%.

Group of orthologs #134. Best score 145 bits
Score difference with first non-orthologous sequence - L.chalumnae:145 P.kodakaraensis:145

H3AMK4              	100.00%		Q5JDH3              	100.00%
Bootstrap support for H3AMK4 as seed ortholog is 100%.
Bootstrap support for Q5JDH3 as seed ortholog is 100%.

Group of orthologs #135. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.kodakaraensis:144

H3ACH9              	100.00%		Q5JDI4              	100.00%
Bootstrap support for H3ACH9 as seed ortholog is 99%.
Bootstrap support for Q5JDI4 as seed ortholog is 100%.

Group of orthologs #136. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:16 P.kodakaraensis:26

H3AJV0              	100.00%		Q5JIE4              	100.00%
Bootstrap support for H3AJV0 as seed ortholog is 66%.
Alternative seed ortholog is H3AAQ7 (16 bits away from this cluster)
Bootstrap support for Q5JIE4 as seed ortholog is 76%.

Group of orthologs #137. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.kodakaraensis:143

H3BGD3              	100.00%		Q5JH36              	100.00%
Bootstrap support for H3BGD3 as seed ortholog is 99%.
Bootstrap support for Q5JH36 as seed ortholog is 100%.

Group of orthologs #138. Best score 142 bits
Score difference with first non-orthologous sequence - L.chalumnae:142 P.kodakaraensis:142

H3AN65              	100.00%		Q5JGJ4              	100.00%
H3BBR9              	57.59%		
Bootstrap support for H3AN65 as seed ortholog is 100%.
Bootstrap support for Q5JGJ4 as seed ortholog is 100%.

Group of orthologs #139. Best score 142 bits
Score difference with first non-orthologous sequence - L.chalumnae:142 P.kodakaraensis:142

H3AKV5              	100.00%		Q5JIF4              	100.00%
Bootstrap support for H3AKV5 as seed ortholog is 100%.
Bootstrap support for Q5JIF4 as seed ortholog is 100%.

Group of orthologs #140. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.kodakaraensis:35

H3BG15              	100.00%		Q5JFS0              	100.00%
Bootstrap support for H3BG15 as seed ortholog is 97%.
Bootstrap support for Q5JFS0 as seed ortholog is 82%.

Group of orthologs #141. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.kodakaraensis:139

H3AB87              	100.00%		Q5JDH5              	100.00%
Bootstrap support for H3AB87 as seed ortholog is 100%.
Bootstrap support for Q5JDH5 as seed ortholog is 100%.

Group of orthologs #142. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.kodakaraensis:139

H3B715              	100.00%		Q5JF63              	100.00%
Bootstrap support for H3B715 as seed ortholog is 100%.
Bootstrap support for Q5JF63 as seed ortholog is 100%.

Group of orthologs #143. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.kodakaraensis:23

H3AP13              	100.00%		Q5JES4              	100.00%
Bootstrap support for H3AP13 as seed ortholog is 100%.
Bootstrap support for Q5JES4 as seed ortholog is 76%.

Group of orthologs #144. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.kodakaraensis:136

H3B3Q4              	100.00%		Q5JFN1              	100.00%
Bootstrap support for H3B3Q4 as seed ortholog is 100%.
Bootstrap support for Q5JFN1 as seed ortholog is 100%.

Group of orthologs #145. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.kodakaraensis:136

H3B800              	100.00%		Q5JGH7              	100.00%
Bootstrap support for H3B800 as seed ortholog is 100%.
Bootstrap support for Q5JGH7 as seed ortholog is 100%.

Group of orthologs #146. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.kodakaraensis:135

H3AP22              	100.00%		Q5JF27              	100.00%
H3ALC0              	73.96%		Q5JFZ0              	9.40%
H3BG19              	54.13%		
Bootstrap support for H3AP22 as seed ortholog is 100%.
Bootstrap support for Q5JF27 as seed ortholog is 100%.

Group of orthologs #147. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.kodakaraensis:135

H2ZYS5              	100.00%		Q5JI54              	100.00%
Bootstrap support for H2ZYS5 as seed ortholog is 96%.
Bootstrap support for Q5JI54 as seed ortholog is 100%.

Group of orthologs #148. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.kodakaraensis:135

H3AAX8              	100.00%		Q5JJG4              	100.00%
Bootstrap support for H3AAX8 as seed ortholog is 100%.
Bootstrap support for Q5JJG4 as seed ortholog is 100%.

Group of orthologs #149. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:37 P.kodakaraensis:135

H3B2F0              	100.00%		Q5JH96              	100.00%
Bootstrap support for H3B2F0 as seed ortholog is 54%.
Alternative seed ortholog is H3A3B4 (37 bits away from this cluster)
Bootstrap support for Q5JH96 as seed ortholog is 100%.

Group of orthologs #150. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.kodakaraensis:135

H3B3U1              	100.00%		Q5JJG6              	100.00%
Bootstrap support for H3B3U1 as seed ortholog is 100%.
Bootstrap support for Q5JJG6 as seed ortholog is 100%.

Group of orthologs #151. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 P.kodakaraensis:134

H3A828              	100.00%		Q5JDR5              	100.00%
H3B5M1              	23.66%		
Bootstrap support for H3A828 as seed ortholog is 100%.
Bootstrap support for Q5JDR5 as seed ortholog is 100%.

Group of orthologs #152. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 P.kodakaraensis:134

H3A5R1              	100.00%		Q5JJF8              	100.00%
H3ADD1              	96.60%		
Bootstrap support for H3A5R1 as seed ortholog is 100%.
Bootstrap support for Q5JJF8 as seed ortholog is 100%.

Group of orthologs #153. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 P.kodakaraensis:134

H3AXX3              	100.00%		Q5JGB4              	100.00%
Bootstrap support for H3AXX3 as seed ortholog is 100%.
Bootstrap support for Q5JGB4 as seed ortholog is 100%.

Group of orthologs #154. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:34 P.kodakaraensis:57

H3B355              	100.00%		Q5JHE3              	100.00%
Bootstrap support for H3B355 as seed ortholog is 87%.
Bootstrap support for Q5JHE3 as seed ortholog is 96%.

Group of orthologs #155. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.kodakaraensis:133

H3B9L6              	100.00%		Q5JE70              	100.00%
Bootstrap support for H3B9L6 as seed ortholog is 100%.
Bootstrap support for Q5JE70 as seed ortholog is 100%.

Group of orthologs #156. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.kodakaraensis:132

M3XKJ9              	100.00%		Q5JJ91              	100.00%
Bootstrap support for M3XKJ9 as seed ortholog is 89%.
Bootstrap support for Q5JJ91 as seed ortholog is 100%.

Group of orthologs #157. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.kodakaraensis:88

H3ALQ1              	100.00%		Q5JGC8              	100.00%
H3BH99              	77.30%		
H3AJS0              	47.39%		
Bootstrap support for H3ALQ1 as seed ortholog is 100%.
Bootstrap support for Q5JGC8 as seed ortholog is 96%.

Group of orthologs #158. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.kodakaraensis:55

H3ATM4              	100.00%		Q5JJ98              	100.00%
H3ASV4              	32.84%		
H2ZSU0              	18.53%		
Bootstrap support for H3ATM4 as seed ortholog is 84%.
Bootstrap support for Q5JJ98 as seed ortholog is 90%.

Group of orthologs #159. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 P.kodakaraensis:130

H2ZSD4              	100.00%		Q5JHS7              	100.00%
Bootstrap support for H2ZSD4 as seed ortholog is 100%.
Bootstrap support for Q5JHS7 as seed ortholog is 100%.

Group of orthologs #160. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.kodakaraensis:129

H3AUF1              	100.00%		Q5JIE9              	100.00%
Bootstrap support for H3AUF1 as seed ortholog is 97%.
Bootstrap support for Q5JIE9 as seed ortholog is 100%.

Group of orthologs #161. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:20 P.kodakaraensis:78

H3B890              	100.00%		Q5JF30              	100.00%
Bootstrap support for H3B890 as seed ortholog is 77%.
Bootstrap support for Q5JF30 as seed ortholog is 99%.

Group of orthologs #162. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.kodakaraensis:125

H3BEE6              	100.00%		Q5JFG2              	100.00%
                    	       		Q5JFG7              	55.90%
Bootstrap support for H3BEE6 as seed ortholog is 91%.
Bootstrap support for Q5JFG2 as seed ortholog is 100%.

Group of orthologs #163. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.kodakaraensis:124

H3A521              	100.00%		Q5JGI1              	100.00%
H3ACS4              	49.30%		
Bootstrap support for H3A521 as seed ortholog is 100%.
Bootstrap support for Q5JGI1 as seed ortholog is 100%.

Group of orthologs #164. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.kodakaraensis:124

H3BIE1              	100.00%		Q52366              	100.00%
H3A7Z4              	47.69%		
Bootstrap support for H3BIE1 as seed ortholog is 100%.
Bootstrap support for Q52366 as seed ortholog is 100%.

Group of orthologs #165. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.kodakaraensis:124

H3BAZ5              	100.00%		Q5JFG9              	100.00%
Bootstrap support for H3BAZ5 as seed ortholog is 100%.
Bootstrap support for Q5JFG9 as seed ortholog is 100%.

Group of orthologs #166. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.kodakaraensis:123

H3ADU9              	100.00%		Q5JIQ8              	100.00%
Bootstrap support for H3ADU9 as seed ortholog is 100%.
Bootstrap support for Q5JIQ8 as seed ortholog is 100%.

Group of orthologs #167. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.kodakaraensis:121

H3AKW1              	100.00%		Q5JGC7              	100.00%
H3AMT7              	35.57%		
Bootstrap support for H3AKW1 as seed ortholog is 100%.
Bootstrap support for Q5JGC7 as seed ortholog is 100%.

Group of orthologs #168. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.kodakaraensis:121

H3AEH1              	100.00%		Q76CZ2              	100.00%
Bootstrap support for H3AEH1 as seed ortholog is 91%.
Bootstrap support for Q76CZ2 as seed ortholog is 100%.

Group of orthologs #169. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.kodakaraensis:119

M3XJQ9              	100.00%		Q5JI34              	100.00%
H3AH77              	68.19%		
H3B2M5              	67.03%		
H3AJC6              	9.18%		
Bootstrap support for M3XJQ9 as seed ortholog is 100%.
Bootstrap support for Q5JI34 as seed ortholog is 100%.

Group of orthologs #170. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:37 P.kodakaraensis:119

H3BA10              	100.00%		Q5JJ45              	100.00%
H3AI08              	34.42%		
H3AG72              	29.04%		
Bootstrap support for H3BA10 as seed ortholog is 86%.
Bootstrap support for Q5JJ45 as seed ortholog is 100%.

Group of orthologs #171. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.kodakaraensis:45

H3AI66              	100.00%		Q5JGT2              	100.00%
                    	       		Q5JI45              	39.12%
Bootstrap support for H3AI66 as seed ortholog is 90%.
Bootstrap support for Q5JGT2 as seed ortholog is 83%.

Group of orthologs #172. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:26 P.kodakaraensis:118

O03174              	100.00%		Q5JHU9              	100.00%
                    	       		Q5JGJ2              	15.90%
                    	       		Q5JGJ3              	8.58%
                    	       		Q5JDL7              	7.09%
Bootstrap support for O03174 as seed ortholog is 75%.
Bootstrap support for Q5JHU9 as seed ortholog is 100%.

Group of orthologs #173. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.kodakaraensis:118

H3AL27              	100.00%		Q5JEZ6              	100.00%
Bootstrap support for H3AL27 as seed ortholog is 100%.
Bootstrap support for Q5JEZ6 as seed ortholog is 100%.

Group of orthologs #174. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:26 P.kodakaraensis:117

H3A5P1              	100.00%		Q5JIB6              	100.00%
                    	       		Q5JH42              	20.14%
Bootstrap support for H3A5P1 as seed ortholog is 77%.
Bootstrap support for Q5JIB6 as seed ortholog is 100%.

Group of orthologs #175. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.kodakaraensis:117

H2ZWB9              	100.00%		Q5JHL2              	100.00%
Bootstrap support for H2ZWB9 as seed ortholog is 100%.
Bootstrap support for Q5JHL2 as seed ortholog is 100%.

Group of orthologs #176. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:30 P.kodakaraensis:117

H3APT4              	100.00%		Q5JDB8              	100.00%
Bootstrap support for H3APT4 as seed ortholog is 92%.
Bootstrap support for Q5JDB8 as seed ortholog is 100%.

Group of orthologs #177. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 P.kodakaraensis:116

H3BIB7              	100.00%		Q5JDK2              	100.00%
H3B921              	62.08%		
H3A4N3              	45.47%		
H2ZWC3              	45.29%		
H3BI94              	43.43%		
H2ZRV4              	43.07%		
H3AZL2              	39.61%		
H2ZX72              	38.28%		
H3BDU1              	36.77%		
H3B302              	36.32%		
H3A4J1              	35.17%		
H2ZYV9              	34.99%		
H3AUR4              	34.81%		
H3B2Y8              	33.84%		
H3AG86              	33.39%		
H3AQG6              	29.57%		
H3AB15              	28.60%		
H3B6Q8              	27.98%		
H3BFK6              	18.03%		
H3A1D8              	16.16%		
H2ZZZ4              	16.07%		
H3AHW6              	15.63%		
H2ZXA6              	15.01%		
H3ADK3              	13.23%		
Bootstrap support for H3BIB7 as seed ortholog is 100%.
Bootstrap support for Q5JDK2 as seed ortholog is 100%.

Group of orthologs #178. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 P.kodakaraensis:116

H2ZV22              	100.00%		Q5JE74              	100.00%
Bootstrap support for H2ZV22 as seed ortholog is 100%.
Bootstrap support for Q5JE74 as seed ortholog is 100%.

Group of orthologs #179. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.kodakaraensis:116

H3A5Q2              	100.00%		Q5JEU9              	100.00%
Bootstrap support for H3A5Q2 as seed ortholog is 88%.
Bootstrap support for Q5JEU9 as seed ortholog is 100%.

Group of orthologs #180. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.kodakaraensis:114

H3A5L2              	100.00%		O52958              	100.00%
H2ZXJ6              	68.34%		
H3AQN6              	28.80%		
H3B9G7              	17.71%		
Bootstrap support for H3A5L2 as seed ortholog is 100%.
Bootstrap support for O52958 as seed ortholog is 100%.

Group of orthologs #181. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.kodakaraensis:114

H3A097              	100.00%		Q5JJF9              	100.00%
H3AG26              	100.00%		
H3BG90              	90.86%		
Bootstrap support for H3A097 as seed ortholog is 100%.
Bootstrap support for H3AG26 as seed ortholog is 100%.
Bootstrap support for Q5JJF9 as seed ortholog is 100%.

Group of orthologs #182. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.kodakaraensis:114

H3BGJ4              	100.00%		Q5JD70              	100.00%
                    	       		Q5JHN7              	7.20%
                    	       		Q5JEI4              	5.35%
Bootstrap support for H3BGJ4 as seed ortholog is 100%.
Bootstrap support for Q5JD70 as seed ortholog is 100%.

Group of orthologs #183. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.kodakaraensis:114

H3BI16              	100.00%		Q5JDP5              	100.00%
                    	       		Q5JDB4              	11.61%
                    	       		Q5JI15              	9.31%
Bootstrap support for H3BI16 as seed ortholog is 100%.
Bootstrap support for Q5JDP5 as seed ortholog is 100%.

Group of orthologs #184. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.kodakaraensis:114

H3A2C0              	100.00%		O08467              	100.00%
Bootstrap support for H3A2C0 as seed ortholog is 92%.
Bootstrap support for O08467 as seed ortholog is 100%.

Group of orthologs #185. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.kodakaraensis:114

H3B6V2              	100.00%		Q5JDI9              	100.00%
Bootstrap support for H3B6V2 as seed ortholog is 100%.
Bootstrap support for Q5JDI9 as seed ortholog is 100%.

Group of orthologs #186. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.kodakaraensis:113

H3BDC6              	100.00%		Q5JHF7              	100.00%
H3B9R3              	18.20%		Q5JE68              	36.94%
Bootstrap support for H3BDC6 as seed ortholog is 100%.
Bootstrap support for Q5JHF7 as seed ortholog is 100%.

Group of orthologs #187. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.kodakaraensis:113

H3A081              	100.00%		Q5JIQ1              	100.00%
Bootstrap support for H3A081 as seed ortholog is 100%.
Bootstrap support for Q5JIQ1 as seed ortholog is 100%.

Group of orthologs #188. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.kodakaraensis:113

H3A5H3              	100.00%		Q5JI74              	100.00%
Bootstrap support for H3A5H3 as seed ortholog is 100%.
Bootstrap support for Q5JI74 as seed ortholog is 100%.

Group of orthologs #189. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:31 P.kodakaraensis:113

H3AHF7              	100.00%		Q5JEX2              	100.00%
Bootstrap support for H3AHF7 as seed ortholog is 95%.
Bootstrap support for Q5JEX2 as seed ortholog is 100%.

Group of orthologs #190. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:18 P.kodakaraensis:113

H3AQH4              	100.00%		Q5JGK8              	100.00%
Bootstrap support for H3AQH4 as seed ortholog is 68%.
Alternative seed ortholog is H3B8H1 (18 bits away from this cluster)
Bootstrap support for Q5JGK8 as seed ortholog is 100%.

Group of orthologs #191. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.kodakaraensis:14

H3AQY9              	100.00%		Q5JGG0              	100.00%
Bootstrap support for H3AQY9 as seed ortholog is 100%.
Bootstrap support for Q5JGG0 as seed ortholog is 72%.
Alternative seed ortholog is Q5JHU7 (14 bits away from this cluster)

Group of orthologs #192. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.kodakaraensis:112

H3AL98              	100.00%		Q5JE01              	100.00%
Bootstrap support for H3AL98 as seed ortholog is 100%.
Bootstrap support for Q5JE01 as seed ortholog is 100%.

Group of orthologs #193. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:40 P.kodakaraensis:111

H2ZXU9              	100.00%		Q5JF69              	100.00%
H3B9L4              	69.68%		
M3XIT3              	18.24%		
H3B2S8              	17.60%		
M3XJ68              	17.40%		
H3B762              	16.92%		
H2ZZE6              	13.19%		
H3A114              	13.12%		
H2ZW74              	10.80%		
H3AIJ4              	7.67%		
H3AES0              	7.03%		
Bootstrap support for H2ZXU9 as seed ortholog is 56%.
Alternative seed ortholog is H3AU42 (40 bits away from this cluster)
Bootstrap support for Q5JF69 as seed ortholog is 100%.

Group of orthologs #194. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.kodakaraensis:111

H3AIW6              	100.00%		Q5JFL7              	100.00%
Bootstrap support for H3AIW6 as seed ortholog is 100%.
Bootstrap support for Q5JFL7 as seed ortholog is 100%.

Group of orthologs #195. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:10 P.kodakaraensis:58

H3B6E9              	100.00%		Q5JIX4              	100.00%
Bootstrap support for H3B6E9 as seed ortholog is 57%.
Alternative seed ortholog is H2ZSW2 (10 bits away from this cluster)
Bootstrap support for Q5JIX4 as seed ortholog is 96%.

Group of orthologs #196. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.kodakaraensis:110

H3ALP2              	100.00%		Q5JDS2              	100.00%
H3BBB9              	100.00%		
H3B8J9              	47.61%		
H2ZRR1              	25.36%		
Bootstrap support for H3ALP2 as seed ortholog is 100%.
Bootstrap support for H3BBB9 as seed ortholog is 100%.
Bootstrap support for Q5JDS2 as seed ortholog is 100%.

Group of orthologs #197. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.kodakaraensis:110

H3ATH0              	100.00%		Q5JER0              	100.00%
                    	       		Q5JHB4              	17.68%
Bootstrap support for H3ATH0 as seed ortholog is 100%.
Bootstrap support for Q5JER0 as seed ortholog is 100%.

Group of orthologs #198. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.kodakaraensis:110

H3BHP5              	100.00%		Q5JIJ0              	100.00%
H3AP60              	9.30%		
Bootstrap support for H3BHP5 as seed ortholog is 100%.
Bootstrap support for Q5JIJ0 as seed ortholog is 100%.

Group of orthologs #199. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:27 P.kodakaraensis:109

H3B5P3              	100.00%		Q5JDJ9              	100.00%
H3B5T0              	100.00%		
H3A4V8              	83.21%		
H3B5M2              	76.15%		
H3B232              	51.56%		
Bootstrap support for H3B5P3 as seed ortholog is 85%.
Bootstrap support for H3B5T0 as seed ortholog is 86%.
Bootstrap support for Q5JDJ9 as seed ortholog is 100%.

Group of orthologs #200. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.kodakaraensis:109

H2ZX24              	100.00%		Q5JDB6              	100.00%
H3B8X5              	5.78%		
Bootstrap support for H2ZX24 as seed ortholog is 100%.
Bootstrap support for Q5JDB6 as seed ortholog is 100%.

Group of orthologs #201. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.kodakaraensis:109

M3XIH8              	100.00%		Q5JJC6              	100.00%
Bootstrap support for M3XIH8 as seed ortholog is 100%.
Bootstrap support for Q5JJC6 as seed ortholog is 100%.

Group of orthologs #202. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.kodakaraensis:108

H3ARJ1              	100.00%		Q5JJG7              	100.00%
H3AA47              	59.23%		
H2ZRJ2              	43.61%		
Bootstrap support for H3ARJ1 as seed ortholog is 100%.
Bootstrap support for Q5JJG7 as seed ortholog is 100%.

Group of orthologs #203. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.kodakaraensis:108

H3AM99              	100.00%		Q5JIR1              	100.00%
Bootstrap support for H3AM99 as seed ortholog is 100%.
Bootstrap support for Q5JIR1 as seed ortholog is 100%.

Group of orthologs #204. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.kodakaraensis:108

H3AN22              	100.00%		Q5JIZ5              	100.00%
Bootstrap support for H3AN22 as seed ortholog is 100%.
Bootstrap support for Q5JIZ5 as seed ortholog is 100%.

Group of orthologs #205. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.kodakaraensis:108

H3AQH8              	100.00%		Q8X268              	100.00%
Bootstrap support for H3AQH8 as seed ortholog is 100%.
Bootstrap support for Q8X268 as seed ortholog is 100%.

Group of orthologs #206. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.kodakaraensis:107

H3ARX8              	100.00%		Q5JJF1              	100.00%
Bootstrap support for H3ARX8 as seed ortholog is 100%.
Bootstrap support for Q5JJF1 as seed ortholog is 100%.

Group of orthologs #207. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.kodakaraensis:107

H3B183              	100.00%		Q5JGN5              	100.00%
Bootstrap support for H3B183 as seed ortholog is 100%.
Bootstrap support for Q5JGN5 as seed ortholog is 100%.

Group of orthologs #208. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:21 P.kodakaraensis:105

H2ZSF2              	100.00%		Q5JHL8              	100.00%
Bootstrap support for H2ZSF2 as seed ortholog is 76%.
Bootstrap support for Q5JHL8 as seed ortholog is 100%.

Group of orthologs #209. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.kodakaraensis:104

H3ATQ3              	100.00%		Q5JJG3              	100.00%
Bootstrap support for H3ATQ3 as seed ortholog is 100%.
Bootstrap support for Q5JJG3 as seed ortholog is 100%.

Group of orthologs #210. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.kodakaraensis:104

H3B6Y8              	100.00%		Q5JJE2              	100.00%
Bootstrap support for H3B6Y8 as seed ortholog is 100%.
Bootstrap support for Q5JJE2 as seed ortholog is 100%.

Group of orthologs #211. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.kodakaraensis:104

M3XKK5              	100.00%		Q5JH82              	100.00%
Bootstrap support for M3XKK5 as seed ortholog is 100%.
Bootstrap support for Q5JH82 as seed ortholog is 100%.

Group of orthologs #212. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.kodakaraensis:102

H3BCW2              	100.00%		Q5JGP4              	100.00%
                    	       		Q5JFZ8              	19.08%
Bootstrap support for H3BCW2 as seed ortholog is 91%.
Bootstrap support for Q5JGP4 as seed ortholog is 100%.

Group of orthologs #213. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.kodakaraensis:102

H3A9L9              	100.00%		Q5JFJ9              	100.00%
Bootstrap support for H3A9L9 as seed ortholog is 100%.
Bootstrap support for Q5JFJ9 as seed ortholog is 100%.

Group of orthologs #214. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.kodakaraensis:102

H3BGL5              	100.00%		Q5JG02              	100.00%
Bootstrap support for H3BGL5 as seed ortholog is 100%.
Bootstrap support for Q5JG02 as seed ortholog is 100%.

Group of orthologs #215. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:15 P.kodakaraensis:101

H3BDA4              	100.00%		Q5JFD8              	100.00%
H3AF65              	62.75%		Q5JIL6              	17.23%
H3B8V3              	45.45%		
H3B5E4              	41.83%		
H3ASN8              	37.49%		
Bootstrap support for H3BDA4 as seed ortholog is 55%.
Alternative seed ortholog is H2ZXY1 (15 bits away from this cluster)
Bootstrap support for Q5JFD8 as seed ortholog is 100%.

Group of orthologs #216. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.kodakaraensis:101

H2ZWJ7              	100.00%		Q5JH39              	100.00%
H3AWL4              	58.65%		
H3B389              	43.23%		
Bootstrap support for H2ZWJ7 as seed ortholog is 100%.
Bootstrap support for Q5JH39 as seed ortholog is 100%.

Group of orthologs #217. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.kodakaraensis:101

H3AK52              	100.00%		Q5JDH4              	100.00%
Bootstrap support for H3AK52 as seed ortholog is 100%.
Bootstrap support for Q5JDH4 as seed ortholog is 100%.

Group of orthologs #218. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.kodakaraensis:101

H3BFH2              	100.00%		Q5JEB7              	100.00%
Bootstrap support for H3BFH2 as seed ortholog is 100%.
Bootstrap support for Q5JEB7 as seed ortholog is 100%.

Group of orthologs #219. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 P.kodakaraensis:100

H3B914              	100.00%		Q5JGT7              	100.00%
Bootstrap support for H3B914 as seed ortholog is 100%.
Bootstrap support for Q5JGT7 as seed ortholog is 100%.

Group of orthologs #220. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.kodakaraensis:99

H3AAA4              	100.00%		Q5JF32              	100.00%
                    	       		Q5JFD3              	44.62%
Bootstrap support for H3AAA4 as seed ortholog is 100%.
Bootstrap support for Q5JF32 as seed ortholog is 100%.

Group of orthologs #221. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.kodakaraensis:47

H2ZTZ5              	100.00%		Q5JFV4              	100.00%
Bootstrap support for H2ZTZ5 as seed ortholog is 100%.
Bootstrap support for Q5JFV4 as seed ortholog is 93%.

Group of orthologs #222. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:27 P.kodakaraensis:99

H3AUY8              	100.00%		Q5JJB9              	100.00%
Bootstrap support for H3AUY8 as seed ortholog is 59%.
Alternative seed ortholog is H3BAF3 (27 bits away from this cluster)
Bootstrap support for Q5JJB9 as seed ortholog is 100%.

Group of orthologs #223. Best score 98 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 P.kodakaraensis:98

M3XJA7              	100.00%		Q5JDP7              	100.00%
Bootstrap support for M3XJA7 as seed ortholog is 100%.
Bootstrap support for Q5JDP7 as seed ortholog is 100%.

Group of orthologs #224. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.kodakaraensis:97

H3BIP8              	100.00%		Q5JEW5              	100.00%
H3B6I8              	36.75%		
Bootstrap support for H3BIP8 as seed ortholog is 100%.
Bootstrap support for Q5JEW5 as seed ortholog is 100%.

Group of orthologs #225. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.kodakaraensis:97

H3AEX7              	100.00%		Q5JD92              	100.00%
Bootstrap support for H3AEX7 as seed ortholog is 100%.
Bootstrap support for Q5JD92 as seed ortholog is 100%.

Group of orthologs #226. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:39 P.kodakaraensis:96

H3A7H2              	100.00%		Q5JG15              	100.00%
Bootstrap support for H3A7H2 as seed ortholog is 90%.
Bootstrap support for Q5JG15 as seed ortholog is 100%.

Group of orthologs #227. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:35 P.kodakaraensis:96

H3ASH8              	100.00%		Q5JJF2              	100.00%
Bootstrap support for H3ASH8 as seed ortholog is 97%.
Bootstrap support for Q5JJF2 as seed ortholog is 100%.

Group of orthologs #228. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.kodakaraensis:96

H3BIK6              	100.00%		Q5JJF6              	100.00%
Bootstrap support for H3BIK6 as seed ortholog is 100%.
Bootstrap support for Q5JJF6 as seed ortholog is 100%.

Group of orthologs #229. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.kodakaraensis:93

H3AMH8              	100.00%		Q5JGZ7              	100.00%
Bootstrap support for H3AMH8 as seed ortholog is 100%.
Bootstrap support for Q5JGZ7 as seed ortholog is 100%.

Group of orthologs #230. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.kodakaraensis:92

H3AC41              	100.00%		Q5JEE1              	100.00%
H3BCW9              	49.25%		
Bootstrap support for H3AC41 as seed ortholog is 100%.
Bootstrap support for Q5JEE1 as seed ortholog is 100%.

Group of orthologs #231. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.kodakaraensis:92

H3AXI6              	100.00%		Q5JFK6              	100.00%
                    	       		Q5JES6              	18.75%
Bootstrap support for H3AXI6 as seed ortholog is 100%.
Bootstrap support for Q5JFK6 as seed ortholog is 100%.

Group of orthologs #232. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.kodakaraensis:92

H3AZJ2              	100.00%		Q5JEX4              	100.00%
Bootstrap support for H3AZJ2 as seed ortholog is 100%.
Bootstrap support for Q5JEX4 as seed ortholog is 100%.

Group of orthologs #233. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.kodakaraensis:91

H3A519              	100.00%		Q5JFZ5              	100.00%
Bootstrap support for H3A519 as seed ortholog is 100%.
Bootstrap support for Q5JFZ5 as seed ortholog is 100%.

Group of orthologs #234. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.kodakaraensis:91

H3B0Y4              	100.00%		Q5JJG5              	100.00%
Bootstrap support for H3B0Y4 as seed ortholog is 100%.
Bootstrap support for Q5JJG5 as seed ortholog is 100%.

Group of orthologs #235. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.kodakaraensis:91

H3BCM7              	100.00%		Q5JF42              	100.00%
Bootstrap support for H3BCM7 as seed ortholog is 100%.
Bootstrap support for Q5JF42 as seed ortholog is 100%.

Group of orthologs #236. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.kodakaraensis:90

H3A0E8              	100.00%		Q5JIE2              	100.00%
H2ZWV6              	50.34%		Q5JGQ5              	9.26%
                    	       		Q5JGQ4              	8.15%
Bootstrap support for H3A0E8 as seed ortholog is 100%.
Bootstrap support for Q5JIE2 as seed ortholog is 100%.

Group of orthologs #237. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.kodakaraensis:90

H3BIE5              	100.00%		Q5JI20              	100.00%
H3A9B1              	34.74%		
H3AAT0              	30.00%		
H3AUA4              	6.29%		
Bootstrap support for H3BIE5 as seed ortholog is 100%.
Bootstrap support for Q5JI20 as seed ortholog is 100%.

Group of orthologs #238. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.kodakaraensis:90

H3A915              	100.00%		Q5JDI6              	100.00%
Bootstrap support for H3A915 as seed ortholog is 100%.
Bootstrap support for Q5JDI6 as seed ortholog is 100%.

Group of orthologs #239. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.kodakaraensis:90

H3AJB8              	100.00%		Q5JGR3              	100.00%
Bootstrap support for H3AJB8 as seed ortholog is 100%.
Bootstrap support for Q5JGR3 as seed ortholog is 100%.

Group of orthologs #240. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:31 P.kodakaraensis:90

H3B6D3              	100.00%		Q5JH34              	100.00%
Bootstrap support for H3B6D3 as seed ortholog is 89%.
Bootstrap support for Q5JH34 as seed ortholog is 100%.

Group of orthologs #241. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.kodakaraensis:89

H3AFG7              	100.00%		Q5JJB8              	100.00%
M3XGW4              	61.65%		Q5JEQ6              	35.38%
H3AGM2              	54.22%		
Bootstrap support for H3AFG7 as seed ortholog is 100%.
Bootstrap support for Q5JJB8 as seed ortholog is 100%.

Group of orthologs #242. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.kodakaraensis:89

O03847              	100.00%		Q5JGH6              	100.00%
                    	       		Q5JIL2              	11.41%
Bootstrap support for O03847 as seed ortholog is 100%.
Bootstrap support for Q5JGH6 as seed ortholog is 100%.

Group of orthologs #243. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.kodakaraensis:89

H3AGP5              	100.00%		O74035              	100.00%
Bootstrap support for H3AGP5 as seed ortholog is 100%.
Bootstrap support for O74035 as seed ortholog is 100%.

Group of orthologs #244. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.kodakaraensis:89

H3AAY7              	100.00%		Q5JIX8              	100.00%
Bootstrap support for H3AAY7 as seed ortholog is 100%.
Bootstrap support for Q5JIX8 as seed ortholog is 100%.

Group of orthologs #245. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.kodakaraensis:89

H3ACR8              	100.00%		Q5JIU6              	100.00%
Bootstrap support for H3ACR8 as seed ortholog is 100%.
Bootstrap support for Q5JIU6 as seed ortholog is 100%.

Group of orthologs #246. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:6 P.kodakaraensis:89

H3BDT0              	100.00%		Q5JIA4              	100.00%
Bootstrap support for H3BDT0 as seed ortholog is 56%.
Alternative seed ortholog is H3AR72 (6 bits away from this cluster)
Bootstrap support for Q5JIA4 as seed ortholog is 100%.

Group of orthologs #247. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.kodakaraensis:88

H3BBK7              	100.00%		Q5JJC3              	100.00%
Bootstrap support for H3BBK7 as seed ortholog is 100%.
Bootstrap support for Q5JJC3 as seed ortholog is 100%.

Group of orthologs #248. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:34 P.kodakaraensis:87

H2ZZ84              	100.00%		Q5JHM0              	100.00%
H3B0I4              	5.06%		Q5JJC2              	14.77%
Bootstrap support for H2ZZ84 as seed ortholog is 89%.
Bootstrap support for Q5JHM0 as seed ortholog is 100%.

Group of orthologs #249. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.kodakaraensis:86

H3ALE4              	100.00%		Q5JE49              	100.00%
Bootstrap support for H3ALE4 as seed ortholog is 100%.
Bootstrap support for Q5JE49 as seed ortholog is 100%.

Group of orthologs #250. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.kodakaraensis:86

H3AJ69              	100.00%		Q877I0              	100.00%
Bootstrap support for H3AJ69 as seed ortholog is 100%.
Bootstrap support for Q877I0 as seed ortholog is 100%.

Group of orthologs #251. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.kodakaraensis:86

H3AP00              	100.00%		Q5JGM4              	100.00%
Bootstrap support for H3AP00 as seed ortholog is 100%.
Bootstrap support for Q5JGM4 as seed ortholog is 100%.

Group of orthologs #252. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.kodakaraensis:86

H3B8U6              	100.00%		Q5JCY8              	100.00%
Bootstrap support for H3B8U6 as seed ortholog is 100%.
Bootstrap support for Q5JCY8 as seed ortholog is 100%.

Group of orthologs #253. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.kodakaraensis:85

H3BGA7              	100.00%		Q5JEQ8              	100.00%
Bootstrap support for H3BGA7 as seed ortholog is 100%.
Bootstrap support for Q5JEQ8 as seed ortholog is 100%.

Group of orthologs #254. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:13 P.kodakaraensis:84

H3AN71              	100.00%		Q5JFI2              	100.00%
H3AZX3              	32.60%		
H3ATC2              	29.06%		
Bootstrap support for H3AN71 as seed ortholog is 63%.
Alternative seed ortholog is H3AMK7 (13 bits away from this cluster)
Bootstrap support for Q5JFI2 as seed ortholog is 100%.

Group of orthologs #255. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:7 P.kodakaraensis:84

H3ASP7              	100.00%		Q5JI92              	100.00%
Bootstrap support for H3ASP7 as seed ortholog is 54%.
Alternative seed ortholog is H3BGZ8 (7 bits away from this cluster)
Bootstrap support for Q5JI92 as seed ortholog is 100%.

Group of orthologs #256. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:24 P.kodakaraensis:83

H2ZUS7              	100.00%		Q68BJ6              	100.00%
H3AQY8              	69.15%		Q68BJ7              	33.25%
                    	       		Q6I7B6              	29.46%
Bootstrap support for H2ZUS7 as seed ortholog is 64%.
Alternative seed ortholog is H3ABG6 (24 bits away from this cluster)
Bootstrap support for Q68BJ6 as seed ortholog is 100%.

Group of orthologs #257. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.kodakaraensis:83

H3B848              	100.00%		Q5JEL5              	100.00%
H3AJ62              	25.28%		
Bootstrap support for H3B848 as seed ortholog is 100%.
Bootstrap support for Q5JEL5 as seed ortholog is 100%.

Group of orthologs #258. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.kodakaraensis:83

H2ZXK8              	100.00%		Q5JDH9              	100.00%
Bootstrap support for H2ZXK8 as seed ortholog is 100%.
Bootstrap support for Q5JDH9 as seed ortholog is 100%.

Group of orthologs #259. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:4 P.kodakaraensis:83

H3AWF2              	100.00%		Q5JGS7              	100.00%
Bootstrap support for H3AWF2 as seed ortholog is 55%.
Alternative seed ortholog is H3ARJ8 (4 bits away from this cluster)
Bootstrap support for Q5JGS7 as seed ortholog is 100%.

Group of orthologs #260. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:4 P.kodakaraensis:82

H2ZVJ5              	100.00%		Q5JIA1              	100.00%
Bootstrap support for H2ZVJ5 as seed ortholog is 54%.
Alternative seed ortholog is H3AT34 (4 bits away from this cluster)
Bootstrap support for Q5JIA1 as seed ortholog is 100%.

Group of orthologs #261. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.kodakaraensis:80

H3ARI4              	100.00%		Q5JG26              	100.00%
Bootstrap support for H3ARI4 as seed ortholog is 100%.
Bootstrap support for Q5JG26 as seed ortholog is 100%.

Group of orthologs #262. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.kodakaraensis:79

H3AE33              	100.00%		Q5JET7              	100.00%
Bootstrap support for H3AE33 as seed ortholog is 100%.
Bootstrap support for Q5JET7 as seed ortholog is 100%.

Group of orthologs #263. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.kodakaraensis:79

H3AUG1              	100.00%		Q5JEX8              	100.00%
Bootstrap support for H3AUG1 as seed ortholog is 100%.
Bootstrap support for Q5JEX8 as seed ortholog is 100%.

Group of orthologs #264. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:14 P.kodakaraensis:78

H3AK03              	100.00%		Q5JHS6              	100.00%
H3A6E8              	38.57%		
H3BH48              	30.01%		
Bootstrap support for H3AK03 as seed ortholog is 77%.
Bootstrap support for Q5JHS6 as seed ortholog is 100%.

Group of orthologs #265. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.kodakaraensis:78

H3AC43              	100.00%		Q5JGM0              	100.00%
Bootstrap support for H3AC43 as seed ortholog is 100%.
Bootstrap support for Q5JGM0 as seed ortholog is 100%.

Group of orthologs #266. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.kodakaraensis:78

H3BBF6              	100.00%		Q5JI47              	100.00%
Bootstrap support for H3BBF6 as seed ortholog is 100%.
Bootstrap support for Q5JI47 as seed ortholog is 100%.

Group of orthologs #267. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.kodakaraensis:76

H3B655              	100.00%		Q5JDG1              	100.00%
H3AS63              	68.90%		
Bootstrap support for H3B655 as seed ortholog is 100%.
Bootstrap support for Q5JDG1 as seed ortholog is 100%.

Group of orthologs #268. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.kodakaraensis:76

H3B8D6              	100.00%		Q5JH35              	100.00%
H2ZTW2              	37.09%		
Bootstrap support for H3B8D6 as seed ortholog is 100%.
Bootstrap support for Q5JH35 as seed ortholog is 100%.

Group of orthologs #269. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.kodakaraensis:76

H3BEZ8              	100.00%		Q5JHS3              	100.00%
Bootstrap support for H3BEZ8 as seed ortholog is 100%.
Bootstrap support for Q5JHS3 as seed ortholog is 100%.

Group of orthologs #270. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.kodakaraensis:76

H3BDL8              	100.00%		Q5JJC9              	100.00%
Bootstrap support for H3BDL8 as seed ortholog is 100%.
Bootstrap support for Q5JJC9 as seed ortholog is 100%.

Group of orthologs #271. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.kodakaraensis:76

M3XIA9              	100.00%		Q5JEK6              	100.00%
Bootstrap support for M3XIA9 as seed ortholog is 100%.
Bootstrap support for Q5JEK6 as seed ortholog is 100%.

Group of orthologs #272. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:16 P.kodakaraensis:75

H3A3E4              	100.00%		Q5JJF4              	100.00%
Bootstrap support for H3A3E4 as seed ortholog is 67%.
Alternative seed ortholog is H3AXA9 (16 bits away from this cluster)
Bootstrap support for Q5JJF4 as seed ortholog is 100%.

Group of orthologs #273. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.kodakaraensis:74

H3AQ49              	100.00%		Q5JIM5              	100.00%
                    	       		Q5JIM4              	35.89%
                    	       		Q5JI36              	22.26%
                    	       		Q5JJ83              	11.91%
Bootstrap support for H3AQ49 as seed ortholog is 100%.
Bootstrap support for Q5JIM5 as seed ortholog is 100%.

Group of orthologs #274. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.kodakaraensis:74

H3ASP4              	100.00%		Q5JHW2              	100.00%
                    	       		Q5JEX9              	31.76%
                    	       		Q5JGT0              	21.23%
                    	       		Q5JIW7              	19.81%
Bootstrap support for H3ASP4 as seed ortholog is 100%.
Bootstrap support for Q5JHW2 as seed ortholog is 100%.

Group of orthologs #275. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.kodakaraensis:74

H3BBH0              	100.00%		Q5JIY3              	100.00%
H3ALH7              	48.40%		
Bootstrap support for H3BBH0 as seed ortholog is 100%.
Bootstrap support for Q5JIY3 as seed ortholog is 100%.

Group of orthologs #276. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 P.kodakaraensis:73

H3ALY6              	100.00%		Q5JE35              	100.00%
Bootstrap support for H3ALY6 as seed ortholog is 100%.
Bootstrap support for Q5JE35 as seed ortholog is 100%.

Group of orthologs #277. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 P.kodakaraensis:73

H3B6W2              	100.00%		Q5JIR5              	100.00%
Bootstrap support for H3B6W2 as seed ortholog is 100%.
Bootstrap support for Q5JIR5 as seed ortholog is 100%.

Group of orthologs #278. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.kodakaraensis:72

H3AG06              	100.00%		Q5JJ26              	100.00%
H3BAG6              	38.98%		
Bootstrap support for H3AG06 as seed ortholog is 100%.
Bootstrap support for Q5JJ26 as seed ortholog is 100%.

Group of orthologs #279. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.kodakaraensis:72

H3AKK7              	100.00%		Q5JH93              	100.00%
H2ZXZ2              	29.24%		
Bootstrap support for H3AKK7 as seed ortholog is 100%.
Bootstrap support for Q5JH93 as seed ortholog is 100%.

Group of orthologs #280. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.kodakaraensis:72

H3AUZ5              	100.00%		Q5JFV6              	100.00%
Bootstrap support for H3AUZ5 as seed ortholog is 100%.
Bootstrap support for Q5JFV6 as seed ortholog is 100%.

Group of orthologs #281. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.kodakaraensis:72

H3ATN4              	100.00%		Q5JJ28              	100.00%
Bootstrap support for H3ATN4 as seed ortholog is 100%.
Bootstrap support for Q5JJ28 as seed ortholog is 100%.

Group of orthologs #282. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:12 P.kodakaraensis:72

H3B418              	100.00%		Q5JF34              	100.00%
Bootstrap support for H3B418 as seed ortholog is 68%.
Alternative seed ortholog is H3AMM8 (12 bits away from this cluster)
Bootstrap support for Q5JF34 as seed ortholog is 100%.

Group of orthologs #283. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.kodakaraensis:71

H2ZTA0              	100.00%		Q5JFK1              	100.00%
H3B895              	100.00%		
H2ZZA6              	17.00%		
H3B538              	16.60%		
Bootstrap support for H2ZTA0 as seed ortholog is 100%.
Bootstrap support for H3B895 as seed ortholog is 100%.
Bootstrap support for Q5JFK1 as seed ortholog is 100%.

Group of orthologs #284. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.kodakaraensis:71

H3ALH3              	100.00%		Q5JG46              	100.00%
Bootstrap support for H3ALH3 as seed ortholog is 100%.
Bootstrap support for Q5JG46 as seed ortholog is 100%.

Group of orthologs #285. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:5 P.kodakaraensis:71

H3B4D1              	100.00%		Q8X270              	100.00%
Bootstrap support for H3B4D1 as seed ortholog is 59%.
Alternative seed ortholog is H3BI97 (5 bits away from this cluster)
Bootstrap support for Q8X270 as seed ortholog is 100%.

Group of orthologs #286. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.kodakaraensis:71

H3BAH9              	100.00%		Q5JGD6              	100.00%
Bootstrap support for H3BAH9 as seed ortholog is 100%.
Bootstrap support for Q5JGD6 as seed ortholog is 100%.

Group of orthologs #287. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 P.kodakaraensis:70

H3AG71              	100.00%		Q5JDG6              	100.00%
H3B2Q5              	42.19%		
Bootstrap support for H3AG71 as seed ortholog is 100%.
Bootstrap support for Q5JDG6 as seed ortholog is 100%.

Group of orthologs #288. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:12 P.kodakaraensis:70

H3ABA0              	100.00%		Q5JHP6              	100.00%
Bootstrap support for H3ABA0 as seed ortholog is 65%.
Alternative seed ortholog is H2ZXQ5 (12 bits away from this cluster)
Bootstrap support for Q5JHP6 as seed ortholog is 100%.

Group of orthologs #289. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 P.kodakaraensis:70

H3B7W6              	100.00%		Q5JDC4              	100.00%
Bootstrap support for H3B7W6 as seed ortholog is 100%.
Bootstrap support for Q5JDC4 as seed ortholog is 100%.

Group of orthologs #290. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 P.kodakaraensis:70

H3BHW7              	100.00%		Q5JG68              	100.00%
Bootstrap support for H3BHW7 as seed ortholog is 100%.
Bootstrap support for Q5JG68 as seed ortholog is 100%.

Group of orthologs #291. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.kodakaraensis:69

H3BD48              	100.00%		Q5JII2              	100.00%
H3BE18              	82.65%		
H3BE79              	56.46%		
H3A4J5              	55.44%		
H3A323              	51.36%		
H3B3K3              	10.54%		
Bootstrap support for H3BD48 as seed ortholog is 100%.
Bootstrap support for Q5JII2 as seed ortholog is 100%.

Group of orthologs #292. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:13 P.kodakaraensis:69

H3AB20              	100.00%		Q5JF65              	100.00%
H3AKH6              	8.46%		
H3B659              	7.74%		
H3AU41              	5.51%		
H3AHU7              	5.38%		
Bootstrap support for H3AB20 as seed ortholog is 56%.
Alternative seed ortholog is H3AX40 (13 bits away from this cluster)
Bootstrap support for Q5JF65 as seed ortholog is 100%.

Group of orthologs #293. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:2 P.kodakaraensis:69

H3AJQ5              	100.00%		Q5JJ48              	100.00%
                    	       		Q5JH60              	5.00%
Bootstrap support for H3AJQ5 as seed ortholog is 52%.
Alternative seed ortholog is H3BCC7 (2 bits away from this cluster)
Bootstrap support for Q5JJ48 as seed ortholog is 100%.

Group of orthologs #294. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:15 P.kodakaraensis:69

H3ABU9              	100.00%		Q5JFY8              	100.00%
Bootstrap support for H3ABU9 as seed ortholog is 62%.
Alternative seed ortholog is H3BCJ0 (15 bits away from this cluster)
Bootstrap support for Q5JFY8 as seed ortholog is 100%.

Group of orthologs #295. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.kodakaraensis:68

H2ZZ41              	100.00%		Q5JIP8              	100.00%
                    	       		Q5JJB1              	10.87%
Bootstrap support for H2ZZ41 as seed ortholog is 100%.
Bootstrap support for Q5JIP8 as seed ortholog is 100%.

Group of orthologs #296. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.kodakaraensis:68

H3AU25              	100.00%		Q5JDM6              	100.00%
Bootstrap support for H3AU25 as seed ortholog is 100%.
Bootstrap support for Q5JDM6 as seed ortholog is 100%.

Group of orthologs #297. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.kodakaraensis:67

H3AWR8              	100.00%		Q5JGN3              	100.00%
Bootstrap support for H3AWR8 as seed ortholog is 100%.
Bootstrap support for Q5JGN3 as seed ortholog is 100%.

Group of orthologs #298. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.kodakaraensis:67

H3B5V9              	100.00%		Q5JHS0              	100.00%
Bootstrap support for H3B5V9 as seed ortholog is 100%.
Bootstrap support for Q5JHS0 as seed ortholog is 100%.

Group of orthologs #299. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.kodakaraensis:66

H3BCH4              	100.00%		Q5JE39              	100.00%
H2ZU00              	16.73%		Q5JD05              	15.16%
Bootstrap support for H3BCH4 as seed ortholog is 100%.
Bootstrap support for Q5JE39 as seed ortholog is 100%.

Group of orthologs #300. Best score 65 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.kodakaraensis:65

M3XIT6              	100.00%		Q5JJ61              	100.00%
H3BEI0              	67.98%		
Bootstrap support for M3XIT6 as seed ortholog is 100%.
Bootstrap support for Q5JJ61 as seed ortholog is 100%.

Group of orthologs #301. Best score 65 bits
Score difference with first non-orthologous sequence - L.chalumnae:10 P.kodakaraensis:65

H3B1C2              	100.00%		Q5JDG9              	100.00%
Bootstrap support for H3B1C2 as seed ortholog is 70%.
Alternative seed ortholog is H3A390 (10 bits away from this cluster)
Bootstrap support for Q5JDG9 as seed ortholog is 100%.

Group of orthologs #302. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.kodakaraensis:64

H3AAY2              	100.00%		Q5JDS0              	100.00%
Bootstrap support for H3AAY2 as seed ortholog is 100%.
Bootstrap support for Q5JDS0 as seed ortholog is 100%.

Group of orthologs #303. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.kodakaraensis:11

H3B3A9              	100.00%		Q5JIE3              	100.00%
Bootstrap support for H3B3A9 as seed ortholog is 100%.
Bootstrap support for Q5JIE3 as seed ortholog is 66%.
Alternative seed ortholog is Q5JE63 (11 bits away from this cluster)

Group of orthologs #304. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.kodakaraensis:63

H3BG56              	100.00%		Q5JE55              	100.00%
H3BBZ4              	14.96%		
H3BBI6              	14.96%		
Bootstrap support for H3BG56 as seed ortholog is 100%.
Bootstrap support for Q5JE55 as seed ortholog is 100%.

Group of orthologs #305. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:15 P.kodakaraensis:63

H3AJP6              	100.00%		Q5JF76              	100.00%
H3B4I8              	100.00%		
Bootstrap support for H3AJP6 as seed ortholog is 67%.
Alternative seed ortholog is H3AUI9 (15 bits away from this cluster)
Bootstrap support for H3B4I8 as seed ortholog is 66%.
Alternative seed ortholog is H3AUI9 (15 bits away from this cluster)
Bootstrap support for Q5JF76 as seed ortholog is 100%.

Group of orthologs #306. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.kodakaraensis:63

H3BAG8              	100.00%		Q5JJH0              	100.00%
Bootstrap support for H3BAG8 as seed ortholog is 100%.
Bootstrap support for Q5JJH0 as seed ortholog is 100%.

Group of orthologs #307. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.kodakaraensis:63

H3BI71              	100.00%		Q5JGT4              	100.00%
Bootstrap support for H3BI71 as seed ortholog is 100%.
Bootstrap support for Q5JGT4 as seed ortholog is 100%.

Group of orthologs #308. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.kodakaraensis:62

H2ZS79              	100.00%		Q5JDR9              	100.00%
H3A0R1              	80.46%		
Bootstrap support for H2ZS79 as seed ortholog is 100%.
Bootstrap support for Q5JDR9 as seed ortholog is 100%.

Group of orthologs #309. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.kodakaraensis:62

H3APB3              	100.00%		Q5JFW0              	100.00%
H3AQV9              	47.25%		
Bootstrap support for H3APB3 as seed ortholog is 100%.
Bootstrap support for Q5JFW0 as seed ortholog is 100%.

Group of orthologs #310. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.kodakaraensis:61

H3BG22              	100.00%		Q5JDG7              	100.00%
H3BGG5              	38.13%		
H2ZTJ1              	14.39%		
Bootstrap support for H3BG22 as seed ortholog is 100%.
Bootstrap support for Q5JDG7 as seed ortholog is 100%.

Group of orthologs #311. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.kodakaraensis:61

H3A242              	100.00%		Q5JH21              	100.00%
Bootstrap support for H3A242 as seed ortholog is 100%.
Bootstrap support for Q5JH21 as seed ortholog is 100%.

Group of orthologs #312. Best score 60 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.kodakaraensis:60

H3A7I4              	100.00%		Q5JH80              	100.00%
Bootstrap support for H3A7I4 as seed ortholog is 100%.
Bootstrap support for Q5JH80 as seed ortholog is 100%.

Group of orthologs #313. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.kodakaraensis:59

H3AZS2              	100.00%		Q5JI42              	100.00%
Bootstrap support for H3AZS2 as seed ortholog is 100%.
Bootstrap support for Q5JI42 as seed ortholog is 100%.

Group of orthologs #314. Best score 58 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.kodakaraensis:58

M3XIF7              	100.00%		Q5JEE0              	100.00%
Bootstrap support for M3XIF7 as seed ortholog is 100%.
Bootstrap support for Q5JEE0 as seed ortholog is 100%.

Group of orthologs #315. Best score 58 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.kodakaraensis:58

H3BHA1              	100.00%		Q5JJ72              	100.00%
Bootstrap support for H3BHA1 as seed ortholog is 100%.
Bootstrap support for Q5JJ72 as seed ortholog is 100%.

Group of orthologs #316. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.kodakaraensis:57

H3AYT8              	100.00%		Q5JII8              	100.00%
H3AY51              	30.28%		Q5JHY3              	33.38%
Bootstrap support for H3AYT8 as seed ortholog is 100%.
Bootstrap support for Q5JII8 as seed ortholog is 100%.

Group of orthologs #317. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.kodakaraensis:57

H3A0E0              	100.00%		Q5JIE1              	100.00%
H3B4H4              	72.30%		
Bootstrap support for H3A0E0 as seed ortholog is 100%.
Bootstrap support for Q5JIE1 as seed ortholog is 100%.

Group of orthologs #318. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.kodakaraensis:57

H3AI94              	100.00%		Q8NKS4              	100.00%
                    	       		Q5JJ90              	11.49%
Bootstrap support for H3AI94 as seed ortholog is 100%.
Bootstrap support for Q8NKS4 as seed ortholog is 100%.

Group of orthologs #319. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.kodakaraensis:56

H3A0B4              	100.00%		Q5JJC1              	100.00%
Bootstrap support for H3A0B4 as seed ortholog is 100%.
Bootstrap support for Q5JJC1 as seed ortholog is 100%.

Group of orthologs #320. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.kodakaraensis:56

H3AIL2              	100.00%		Q5JGM7              	100.00%
Bootstrap support for H3AIL2 as seed ortholog is 100%.
Bootstrap support for Q5JGM7 as seed ortholog is 100%.

Group of orthologs #321. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.kodakaraensis:56

H3AKA0              	100.00%		Q5JGT6              	100.00%
Bootstrap support for H3AKA0 as seed ortholog is 100%.
Bootstrap support for Q5JGT6 as seed ortholog is 100%.

Group of orthologs #322. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.kodakaraensis:56

H3BCS7              	100.00%		Q5JE51              	100.00%
Bootstrap support for H3BCS7 as seed ortholog is 100%.
Bootstrap support for Q5JE51 as seed ortholog is 100%.

Group of orthologs #323. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.kodakaraensis:56

H3BBG8              	100.00%		Q5JFX3              	100.00%
Bootstrap support for H3BBG8 as seed ortholog is 100%.
Bootstrap support for Q5JFX3 as seed ortholog is 100%.

Group of orthologs #324. Best score 55 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.kodakaraensis:55

H3BF48              	100.00%		Q5JE10              	100.00%
H3AYF7              	39.36%		
H3B5S4              	22.67%		
H3B5B0              	18.61%		
H2ZVP0              	14.01%		
Bootstrap support for H3BF48 as seed ortholog is 100%.
Bootstrap support for Q5JE10 as seed ortholog is 100%.

Group of orthologs #325. Best score 55 bits
Score difference with first non-orthologous sequence - L.chalumnae:2 P.kodakaraensis:55

H3AXH4              	100.00%		Q5JGZ1              	100.00%
H3AHZ2              	77.19%		Q5JH08              	10.38%
H3AC81              	75.22%		
Bootstrap support for H3AXH4 as seed ortholog is 52%.
Alternative seed ortholog is H3BF75 (2 bits away from this cluster)
Bootstrap support for Q5JGZ1 as seed ortholog is 100%.

Group of orthologs #326. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.kodakaraensis:54

H3AQ52              	100.00%		Q5JFV5              	100.00%
H3AGM9              	47.89%		
Bootstrap support for H3AQ52 as seed ortholog is 100%.
Bootstrap support for Q5JFV5 as seed ortholog is 100%.

Group of orthologs #327. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.kodakaraensis:54

H3B1T9              	100.00%		Q5JIL1              	100.00%
                    	       		Q5JGG3              	10.98%
Bootstrap support for H3B1T9 as seed ortholog is 100%.
Bootstrap support for Q5JIL1 as seed ortholog is 100%.

Group of orthologs #328. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.kodakaraensis:54

H3BI06              	100.00%		Q5JIV0              	100.00%
Bootstrap support for H3BI06 as seed ortholog is 100%.
Bootstrap support for Q5JIV0 as seed ortholog is 100%.

Group of orthologs #329. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.kodakaraensis:53

H3A2G3              	100.00%		Q5JEN7              	100.00%
                    	       		Q5JIA8              	42.71%
                    	       		Q5JEY6              	37.36%
                    	       		Q5JFH7              	35.42%
                    	       		Q5JEW2              	33.94%
Bootstrap support for H3A2G3 as seed ortholog is 100%.
Bootstrap support for Q5JEN7 as seed ortholog is 100%.

Group of orthologs #330. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.kodakaraensis:53

H3BAI4              	100.00%		Q5JEG7              	100.00%
                    	       		Q5JD61              	10.02%
Bootstrap support for H3BAI4 as seed ortholog is 100%.
Bootstrap support for Q5JEG7 as seed ortholog is 100%.

Group of orthologs #331. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:6 P.kodakaraensis:53

H3AUK5              	100.00%		Q5JIY4              	100.00%
Bootstrap support for H3AUK5 as seed ortholog is 47%.
Alternative seed ortholog is H3AC68 (6 bits away from this cluster)
Bootstrap support for Q5JIY4 as seed ortholog is 100%.

Group of orthologs #332. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.kodakaraensis:52

H3AWQ0              	100.00%		Q5JIY8              	100.00%
Bootstrap support for H3AWQ0 as seed ortholog is 100%.
Bootstrap support for Q5JIY8 as seed ortholog is 100%.

Group of orthologs #333. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.kodakaraensis:52

H3B875              	100.00%		Q5JJG2              	100.00%
Bootstrap support for H3B875 as seed ortholog is 100%.
Bootstrap support for Q5JJG2 as seed ortholog is 100%.

Group of orthologs #334. Best score 51 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.kodakaraensis:51

H3BFT4              	100.00%		Q5JIR6              	100.00%
Bootstrap support for H3BFT4 as seed ortholog is 100%.
Bootstrap support for Q5JIR6 as seed ortholog is 100%.

Group of orthologs #335. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.kodakaraensis:50

H3BIA1              	100.00%		Q5JGF8              	100.00%
H3B7T3              	65.50%		
H3B0A6              	54.17%		
Bootstrap support for H3BIA1 as seed ortholog is 100%.
Bootstrap support for Q5JGF8 as seed ortholog is 100%.

Group of orthologs #336. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.kodakaraensis:50

H2ZVT7              	100.00%		Q5JF66              	100.00%
Bootstrap support for H2ZVT7 as seed ortholog is 100%.
Bootstrap support for Q5JF66 as seed ortholog is 100%.

Group of orthologs #337. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.kodakaraensis:50

H3A0T0              	100.00%		Q5JIR4              	100.00%
Bootstrap support for H3A0T0 as seed ortholog is 100%.
Bootstrap support for Q5JIR4 as seed ortholog is 100%.

Group of orthologs #338. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.kodakaraensis:50

H3ARF9              	100.00%		Q5JF17              	100.00%
Bootstrap support for H3ARF9 as seed ortholog is 100%.
Bootstrap support for Q5JF17 as seed ortholog is 100%.

Group of orthologs #339. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.kodakaraensis:50

H3BH05              	100.00%		Q5JEM0              	100.00%
Bootstrap support for H3BH05 as seed ortholog is 100%.
Bootstrap support for Q5JEM0 as seed ortholog is 100%.

Group of orthologs #340. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.kodakaraensis:49

H3AH26              	100.00%		Q5JE50              	100.00%
H3AXL2              	100.00%		
Bootstrap support for H3AH26 as seed ortholog is 100%.
Bootstrap support for H3AXL2 as seed ortholog is 100%.
Bootstrap support for Q5JE50 as seed ortholog is 100%.

Group of orthologs #341. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.kodakaraensis:49

H3AKY1              	100.00%		Q5JDA4              	100.00%
Bootstrap support for H3AKY1 as seed ortholog is 100%.
Bootstrap support for Q5JDA4 as seed ortholog is 100%.

Group of orthologs #342. Best score 48 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.kodakaraensis:48

H3AX93              	100.00%		Q5JIU7              	100.00%
H3B7H7              	72.96%		Q5JI19              	23.16%
H3AZZ9              	49.49%		
Bootstrap support for H3AX93 as seed ortholog is 100%.
Bootstrap support for Q5JIU7 as seed ortholog is 100%.

Group of orthologs #343. Best score 48 bits
Score difference with first non-orthologous sequence - L.chalumnae:3 P.kodakaraensis:48

H3ADW1              	100.00%		Q5JIE0              	100.00%
H2ZZC6              	23.48%		
Bootstrap support for H3ADW1 as seed ortholog is 55%.
Alternative seed ortholog is M3XHD0 (3 bits away from this cluster)
Bootstrap support for Q5JIE0 as seed ortholog is 100%.

Group of orthologs #344. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.kodakaraensis:47

H3ADG6              	100.00%		Q5JE88              	100.00%
Bootstrap support for H3ADG6 as seed ortholog is 100%.
Bootstrap support for Q5JE88 as seed ortholog is 100%.

Group of orthologs #345. Best score 46 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.kodakaraensis:46

H3A604              	100.00%		Q5JH23              	100.00%
H3AS71              	6.12%		
Bootstrap support for H3A604 as seed ortholog is 100%.
Bootstrap support for Q5JH23 as seed ortholog is 100%.

Group of orthologs #346. Best score 46 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.kodakaraensis:46

H3A3N3              	100.00%		Q5JJF7              	100.00%
H3ABR9              	100.00%		
Bootstrap support for H3A3N3 as seed ortholog is 100%.
Bootstrap support for H3ABR9 as seed ortholog is 100%.
Bootstrap support for Q5JJF7 as seed ortholog is 100%.

Group of orthologs #347. Best score 46 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.kodakaraensis:46

H3ALZ9              	100.00%		Q5JGD5              	100.00%
                    	       		Q5JD91              	8.78%
Bootstrap support for H3ALZ9 as seed ortholog is 100%.
Bootstrap support for Q5JGD5 as seed ortholog is 100%.

Group of orthologs #348. Best score 46 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.kodakaraensis:46

H3BE98              	100.00%		Q5JHB2              	100.00%
Bootstrap support for H3BE98 as seed ortholog is 100%.
Bootstrap support for Q5JHB2 as seed ortholog is 100%.

Group of orthologs #349. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.kodakaraensis:45

H2ZWF6              	100.00%		Q5JIN0              	100.00%
H3AGS8              	74.52%		
H3B1D8              	58.02%		
Bootstrap support for H2ZWF6 as seed ortholog is 100%.
Bootstrap support for Q5JIN0 as seed ortholog is 100%.

Group of orthologs #350. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.kodakaraensis:45

H3AID0              	100.00%		Q5JFS8              	100.00%
H3A0Q5              	33.49%		
Bootstrap support for H3AID0 as seed ortholog is 100%.
Bootstrap support for Q5JFS8 as seed ortholog is 100%.

Group of orthologs #351. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.kodakaraensis:45

H3A4K9              	100.00%		Q5JHQ7              	100.00%
Bootstrap support for H3A4K9 as seed ortholog is 100%.
Bootstrap support for Q5JHQ7 as seed ortholog is 100%.

Group of orthologs #352. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.kodakaraensis:44

H3AVG7              	100.00%		Q5JFQ4              	100.00%
Bootstrap support for H3AVG7 as seed ortholog is 100%.
Bootstrap support for Q5JFQ4 as seed ortholog is 100%.

Group of orthologs #353. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.kodakaraensis:44

H3BEJ6              	100.00%		Q5JDN5              	100.00%
Bootstrap support for H3BEJ6 as seed ortholog is 100%.
Bootstrap support for Q5JDN5 as seed ortholog is 100%.

Group of orthologs #354. Best score 43 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 P.kodakaraensis:43

H3A0A8              	100.00%		Q5JDL4              	100.00%
H3BHW4              	100.00%		
H3B3V8              	8.09%		
Bootstrap support for H3A0A8 as seed ortholog is 100%.
Bootstrap support for H3BHW4 as seed ortholog is 100%.
Bootstrap support for Q5JDL4 as seed ortholog is 100%.

Group of orthologs #355. Best score 42 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.kodakaraensis:42

H2ZYH1              	100.00%		Q5JEM4              	100.00%
                    	       		Q5JF59              	22.11%
                    	       		Q5JJ54              	22.11%
                    	       		Q5JFJ1              	19.90%
                    	       		Q5JIG9              	18.18%
                    	       		Q5JDD9              	16.95%
                    	       		Q5JEB0              	16.95%
                    	       		Q5JIN8              	15.48%
                    	       		Q5JG78              	14.74%
                    	       		Q5JE43              	14.50%
                    	       		Q5JHD4              	14.25%
                    	       		Q5JG38              	12.53%
                    	       		Q5JGD3              	12.29%
                    	       		Q5JH77              	12.29%
                    	       		Q5JJ95              	12.04%
                    	       		Q5JEP9              	11.79%
                    	       		Q5JGV1              	11.79%
                    	       		Q5JDA7              	11.55%
                    	       		Q5JDD3              	11.55%
                    	       		Q5JG06              	10.81%
                    	       		Q5JG70              	10.81%
                    	       		Q5JG56              	10.32%
                    	       		Q5JJ96              	9.83%
                    	       		Q5JDU2              	9.34%
                    	       		Q5JHL7              	9.34%
                    	       		Q5JDT1              	8.85%
                    	       		Q5JIG1              	8.35%
                    	       		Q5JFI8              	8.35%
                    	       		Q5JFR9              	7.62%
                    	       		Q5JIB0              	7.37%
                    	       		Q5JDQ2              	7.13%
                    	       		Q5JDU1              	7.13%
                    	       		Q5JCX0              	6.88%
                    	       		Q5JHJ6              	6.63%
                    	       		Q5JG66              	6.39%
                    	       		Q5JDP4              	5.65%
Bootstrap support for H2ZYH1 as seed ortholog is 100%.
Bootstrap support for Q5JEM4 as seed ortholog is 100%.

Group of orthologs #356. Best score 42 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.kodakaraensis:42

H3AD94              	100.00%		Q5JG60              	100.00%
                    	       		Q5JHQ2              	6.63%
Bootstrap support for H3AD94 as seed ortholog is 100%.
Bootstrap support for Q5JG60 as seed ortholog is 100%.

Group of orthologs #357. Best score 42 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.kodakaraensis:42

H3AGY8              	100.00%		Q5JDH1              	100.00%
Bootstrap support for H3AGY8 as seed ortholog is 100%.
Bootstrap support for Q5JDH1 as seed ortholog is 100%.

Group of orthologs #358. Best score 40 bits
Score difference with first non-orthologous sequence - L.chalumnae:40 P.kodakaraensis:40

H3A1U3              	100.00%		Q5JFH5              	100.00%
                    	       		Q5JHR1              	11.78%
Bootstrap support for H3A1U3 as seed ortholog is 100%.
Bootstrap support for Q5JFH5 as seed ortholog is 100%.