###################################
1289 groups of orthologs
2109 in-paralogs from L.chalumnae
1332 in-paralogs from P.knowlesi
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3301 bits
Score difference with first non-orthologous sequence - L.chalumnae:3301 P.knowlesi:3301

H3AQI5              	100.00%		B3KZY4              	100.00%
Bootstrap support for H3AQI5 as seed ortholog is 100%.
Bootstrap support for B3KZY4 as seed ortholog is 100%.

Group of orthologs #2. Best score 3298 bits
Score difference with first non-orthologous sequence - L.chalumnae:1983 P.knowlesi:2281

H3B1H3              	100.00%		B3KZT8              	100.00%
Bootstrap support for H3B1H3 as seed ortholog is 100%.
Bootstrap support for B3KZT8 as seed ortholog is 100%.

Group of orthologs #3. Best score 2357 bits
Score difference with first non-orthologous sequence - L.chalumnae:841 P.knowlesi:1295

H2ZZW7              	100.00%		B3L363              	100.00%
H2ZXC8              	24.53%		
H3AFE6              	6.74%		
Bootstrap support for H2ZZW7 as seed ortholog is 100%.
Bootstrap support for B3L363 as seed ortholog is 100%.

Group of orthologs #4. Best score 1989 bits
Score difference with first non-orthologous sequence - L.chalumnae:651 P.knowlesi:258

H3BBD5              	100.00%		B3L1Z2              	100.00%
H2ZZM9              	38.02%		
H3ASB2              	33.56%		
H3A2B2              	32.12%		
Bootstrap support for H3BBD5 as seed ortholog is 99%.
Bootstrap support for B3L1Z2 as seed ortholog is 97%.

Group of orthologs #5. Best score 1414 bits
Score difference with first non-orthologous sequence - L.chalumnae:1414 P.knowlesi:951

H3AVP5              	100.00%		B3L428              	100.00%
Bootstrap support for H3AVP5 as seed ortholog is 100%.
Bootstrap support for B3L428 as seed ortholog is 100%.

Group of orthologs #6. Best score 1315 bits
Score difference with first non-orthologous sequence - L.chalumnae:1315 P.knowlesi:648

H2ZS81              	100.00%		B3L1P3              	100.00%
Bootstrap support for H2ZS81 as seed ortholog is 100%.
Bootstrap support for B3L1P3 as seed ortholog is 100%.

Group of orthologs #7. Best score 1292 bits
Score difference with first non-orthologous sequence - L.chalumnae:1292 P.knowlesi:1292

H3A0Y3              	100.00%		B3L0J5              	100.00%
Bootstrap support for H3A0Y3 as seed ortholog is 100%.
Bootstrap support for B3L0J5 as seed ortholog is 100%.

Group of orthologs #8. Best score 1192 bits
Score difference with first non-orthologous sequence - L.chalumnae:1192 P.knowlesi:1192

H3BBW8              	100.00%		B3LB54              	100.00%
Bootstrap support for H3BBW8 as seed ortholog is 100%.
Bootstrap support for B3LB54 as seed ortholog is 100%.

Group of orthologs #9. Best score 1166 bits
Score difference with first non-orthologous sequence - L.chalumnae:1166 P.knowlesi:1166

H3B4L8              	100.00%		B3L4A9              	100.00%
Bootstrap support for H3B4L8 as seed ortholog is 100%.
Bootstrap support for B3L4A9 as seed ortholog is 100%.

Group of orthologs #10. Best score 1161 bits
Score difference with first non-orthologous sequence - L.chalumnae:1161 P.knowlesi:1161

H3AH65              	100.00%		B3LBP4              	100.00%
H3AU29              	9.65%		
Bootstrap support for H3AH65 as seed ortholog is 100%.
Bootstrap support for B3LBP4 as seed ortholog is 100%.

Group of orthologs #11. Best score 1119 bits
Score difference with first non-orthologous sequence - L.chalumnae:1119 P.knowlesi:1119

H3AN14              	100.00%		B3LCI5              	100.00%
H3AKV2              	66.83%		
Bootstrap support for H3AN14 as seed ortholog is 100%.
Bootstrap support for B3LCI5 as seed ortholog is 100%.

Group of orthologs #12. Best score 1114 bits
Score difference with first non-orthologous sequence - L.chalumnae:1114 P.knowlesi:1114

H3A5L4              	100.00%		B3LBF9              	100.00%
H3ALH9              	41.90%		
Bootstrap support for H3A5L4 as seed ortholog is 100%.
Bootstrap support for B3LBF9 as seed ortholog is 100%.

Group of orthologs #13. Best score 1087 bits
Score difference with first non-orthologous sequence - L.chalumnae:549 P.knowlesi:543

H2ZX54              	100.00%		B3L263              	100.00%
Bootstrap support for H2ZX54 as seed ortholog is 100%.
Bootstrap support for B3L263 as seed ortholog is 100%.

Group of orthologs #14. Best score 1061 bits
Score difference with first non-orthologous sequence - L.chalumnae:494 P.knowlesi:723

H3ASK6              	100.00%		B3L9Q6              	100.00%
H3A6N0              	76.90%		
Bootstrap support for H3ASK6 as seed ortholog is 100%.
Bootstrap support for B3L9Q6 as seed ortholog is 100%.

Group of orthologs #15. Best score 1058 bits
Score difference with first non-orthologous sequence - L.chalumnae:812 P.knowlesi:569

H3BGV0              	100.00%		B3L8U1              	100.00%
Bootstrap support for H3BGV0 as seed ortholog is 100%.
Bootstrap support for B3L8U1 as seed ortholog is 100%.

Group of orthologs #16. Best score 1038 bits
Score difference with first non-orthologous sequence - L.chalumnae:1038 P.knowlesi:1038

H3AI30              	100.00%		B3LBC1              	100.00%
Bootstrap support for H3AI30 as seed ortholog is 100%.
Bootstrap support for B3LBC1 as seed ortholog is 100%.

Group of orthologs #17. Best score 996 bits
Score difference with first non-orthologous sequence - L.chalumnae:996 P.knowlesi:996

H3BI03              	100.00%		B3L8Q4              	100.00%
Bootstrap support for H3BI03 as seed ortholog is 100%.
Bootstrap support for B3L8Q4 as seed ortholog is 100%.

Group of orthologs #18. Best score 974 bits
Score difference with first non-orthologous sequence - L.chalumnae:497 P.knowlesi:304

H3AWB6              	100.00%		B3L7L4              	100.00%
H3B882              	10.88%		
Bootstrap support for H3AWB6 as seed ortholog is 100%.
Bootstrap support for B3L7L4 as seed ortholog is 100%.

Group of orthologs #19. Best score 952 bits
Score difference with first non-orthologous sequence - L.chalumnae:952 P.knowlesi:952

H3AU80              	100.00%		B3L960              	100.00%
H3BFJ1              	51.72%		
Bootstrap support for H3AU80 as seed ortholog is 100%.
Bootstrap support for B3L960 as seed ortholog is 100%.

Group of orthologs #20. Best score 946 bits
Score difference with first non-orthologous sequence - L.chalumnae:744 P.knowlesi:946

H3AX27              	100.00%		B3LCZ1              	100.00%
Bootstrap support for H3AX27 as seed ortholog is 100%.
Bootstrap support for B3LCZ1 as seed ortholog is 100%.

Group of orthologs #21. Best score 930 bits
Score difference with first non-orthologous sequence - L.chalumnae:447 P.knowlesi:930

H2ZV91              	100.00%		B3L1A4              	100.00%
H3AB35              	73.10%		
H2ZV15              	51.46%		
H3AWU4              	48.54%		
H3B4D4              	42.11%		
H3B597              	6.73%		
Bootstrap support for H2ZV91 as seed ortholog is 100%.
Bootstrap support for B3L1A4 as seed ortholog is 100%.

Group of orthologs #22. Best score 901 bits
Score difference with first non-orthologous sequence - L.chalumnae:901 P.knowlesi:901

H3BCH2              	100.00%		B3L7A0              	100.00%
Bootstrap support for H3BCH2 as seed ortholog is 100%.
Bootstrap support for B3L7A0 as seed ortholog is 100%.

Group of orthologs #23. Best score 848 bits
Score difference with first non-orthologous sequence - L.chalumnae:848 P.knowlesi:848

H3B666              	100.00%		B3L1S9              	100.00%
Bootstrap support for H3B666 as seed ortholog is 100%.
Bootstrap support for B3L1S9 as seed ortholog is 100%.

Group of orthologs #24. Best score 830 bits
Score difference with first non-orthologous sequence - L.chalumnae:415 P.knowlesi:830

H3BFV4              	100.00%		B3L2J7              	100.00%
Bootstrap support for H3BFV4 as seed ortholog is 100%.
Bootstrap support for B3L2J7 as seed ortholog is 100%.

Group of orthologs #25. Best score 826 bits
Score difference with first non-orthologous sequence - L.chalumnae:536 P.knowlesi:826

H3A0V7              	100.00%		B3L5Y2              	100.00%
H3BCT1              	61.73%		
Bootstrap support for H3A0V7 as seed ortholog is 100%.
Bootstrap support for B3L5Y2 as seed ortholog is 100%.

Group of orthologs #26. Best score 823 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.knowlesi:823

H3A7C7              	100.00%		B3L3M0              	100.00%
H3B4P9              	81.40%		
H3A954              	80.23%		
H3ASR3              	75.58%		
H3AS44              	50.00%		
H3A580              	15.12%		
Bootstrap support for H3A7C7 as seed ortholog is 94%.
Bootstrap support for B3L3M0 as seed ortholog is 100%.

Group of orthologs #27. Best score 818 bits
Score difference with first non-orthologous sequence - L.chalumnae:365 P.knowlesi:412

H3BDY4              	100.00%		B3KZL1              	100.00%
H3ANB8              	67.34%		
M3XI19              	63.06%		
H2ZU49              	54.15%		
Bootstrap support for H3BDY4 as seed ortholog is 100%.
Bootstrap support for B3KZL1 as seed ortholog is 100%.

Group of orthologs #28. Best score 818 bits
Score difference with first non-orthologous sequence - L.chalumnae:287 P.knowlesi:309

H3AEU0              	100.00%		B3L2J4              	100.00%
Bootstrap support for H3AEU0 as seed ortholog is 100%.
Bootstrap support for B3L2J4 as seed ortholog is 100%.

Group of orthologs #29. Best score 804 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.knowlesi:804

H3BI74              	91.87%		B3L1P1              	100.00%
H3AF19              	100.00%		B3L347              	100.00%
H3BI79              	100.00%		
H3BI69              	79.67%		
H3AW62              	70.73%		
H3AGU3              	61.79%		
H3BF86              	33.33%		
Bootstrap support for H3AF19 as seed ortholog is 99%.
Bootstrap support for H3BI79 as seed ortholog is 99%.
Bootstrap support for B3L1P1 as seed ortholog is 100%.
Bootstrap support for B3L347 as seed ortholog is 100%.

Group of orthologs #30. Best score 790 bits
Score difference with first non-orthologous sequence - L.chalumnae:790 P.knowlesi:790

H3ARS4              	100.00%		B3L4J0              	100.00%
Bootstrap support for H3ARS4 as seed ortholog is 100%.
Bootstrap support for B3L4J0 as seed ortholog is 100%.

Group of orthologs #31. Best score 748 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 P.knowlesi:748

H2ZV96              	100.00%		B3L8H8              	100.00%
Bootstrap support for H2ZV96 as seed ortholog is 84%.
Bootstrap support for B3L8H8 as seed ortholog is 100%.

Group of orthologs #32. Best score 747 bits
Score difference with first non-orthologous sequence - L.chalumnae:747 P.knowlesi:747

H3AEC4              	100.00%		B3L2B2              	100.00%
Bootstrap support for H3AEC4 as seed ortholog is 100%.
Bootstrap support for B3L2B2 as seed ortholog is 100%.

Group of orthologs #33. Best score 742 bits
Score difference with first non-orthologous sequence - L.chalumnae:742 P.knowlesi:742

H3AK74              	100.00%		B3L7Y9              	100.00%
Bootstrap support for H3AK74 as seed ortholog is 100%.
Bootstrap support for B3L7Y9 as seed ortholog is 100%.

Group of orthologs #34. Best score 737 bits
Score difference with first non-orthologous sequence - L.chalumnae:444 P.knowlesi:737

H3AL07              	100.00%		B3L5E9              	100.00%
Bootstrap support for H3AL07 as seed ortholog is 100%.
Bootstrap support for B3L5E9 as seed ortholog is 100%.

Group of orthologs #35. Best score 733 bits
Score difference with first non-orthologous sequence - L.chalumnae:487 P.knowlesi:261

H3AKY2              	100.00%		B3L842              	100.00%
Bootstrap support for H3AKY2 as seed ortholog is 100%.
Bootstrap support for B3L842 as seed ortholog is 99%.

Group of orthologs #36. Best score 727 bits
Score difference with first non-orthologous sequence - L.chalumnae:727 P.knowlesi:620

H3B5X3              	100.00%		B3L9E5              	100.00%
H2ZWJ3              	12.53%		
Bootstrap support for H3B5X3 as seed ortholog is 100%.
Bootstrap support for B3L9E5 as seed ortholog is 100%.

Group of orthologs #37. Best score 725 bits
Score difference with first non-orthologous sequence - L.chalumnae:725 P.knowlesi:725

H3B017              	100.00%		B3L6T7              	100.00%
Bootstrap support for H3B017 as seed ortholog is 100%.
Bootstrap support for B3L6T7 as seed ortholog is 100%.

Group of orthologs #38. Best score 723 bits
Score difference with first non-orthologous sequence - L.chalumnae:723 P.knowlesi:723

H3AJG5              	100.00%		B3LBT4              	100.00%
Bootstrap support for H3AJG5 as seed ortholog is 100%.
Bootstrap support for B3LBT4 as seed ortholog is 100%.

Group of orthologs #39. Best score 722 bits
Score difference with first non-orthologous sequence - L.chalumnae:211 P.knowlesi:315

H3AYQ6              	100.00%		B3L6X8              	100.00%
Bootstrap support for H3AYQ6 as seed ortholog is 99%.
Bootstrap support for B3L6X8 as seed ortholog is 100%.

Group of orthologs #40. Best score 715 bits
Score difference with first non-orthologous sequence - L.chalumnae:640 P.knowlesi:715

H3AG44              	100.00%		B3L165              	100.00%
H3AIC7              	70.77%		
Bootstrap support for H3AG44 as seed ortholog is 100%.
Bootstrap support for B3L165 as seed ortholog is 100%.

Group of orthologs #41. Best score 715 bits
Score difference with first non-orthologous sequence - L.chalumnae:715 P.knowlesi:715

H3AUF4              	100.00%		B3L7Y7              	100.00%
Bootstrap support for H3AUF4 as seed ortholog is 100%.
Bootstrap support for B3L7Y7 as seed ortholog is 100%.

Group of orthologs #42. Best score 694 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 P.knowlesi:694

H3AQQ2              	100.00%		B3L184              	100.00%
H3BAN4              	21.43%		
Bootstrap support for H3AQQ2 as seed ortholog is 98%.
Bootstrap support for B3L184 as seed ortholog is 100%.

Group of orthologs #43. Best score 672 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.knowlesi:672

H3BGD8              	100.00%		B3L200              	100.00%
H3BD82              	7.34%		
Bootstrap support for H3BGD8 as seed ortholog is 99%.
Bootstrap support for B3L200 as seed ortholog is 100%.

Group of orthologs #44. Best score 665 bits
Score difference with first non-orthologous sequence - L.chalumnae:665 P.knowlesi:665

H3AKV9              	100.00%		B3L369              	100.00%
Bootstrap support for H3AKV9 as seed ortholog is 100%.
Bootstrap support for B3L369 as seed ortholog is 100%.

Group of orthologs #45. Best score 665 bits
Score difference with first non-orthologous sequence - L.chalumnae:665 P.knowlesi:554

H3AYT4              	100.00%		B3L4K9              	100.00%
Bootstrap support for H3AYT4 as seed ortholog is 100%.
Bootstrap support for B3L4K9 as seed ortholog is 100%.

Group of orthologs #46. Best score 661 bits
Score difference with first non-orthologous sequence - L.chalumnae:397 P.knowlesi:278

H3B286              	100.00%		B3L3L7              	100.00%
Bootstrap support for H3B286 as seed ortholog is 100%.
Bootstrap support for B3L3L7 as seed ortholog is 100%.

Group of orthologs #47. Best score 656 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 P.knowlesi:49

H3BBJ9              	100.00%		B3LDA3              	100.00%
H2ZUX4              	76.19%		
H3A754              	68.57%		
H3AUT1              	62.86%		
H3AVL6              	61.90%		
H3A626              	59.05%		
H3A440              	55.24%		
Bootstrap support for H3BBJ9 as seed ortholog is 99%.
Bootstrap support for B3LDA3 as seed ortholog is 97%.

Group of orthologs #48. Best score 651 bits
Score difference with first non-orthologous sequence - L.chalumnae:651 P.knowlesi:651

H3BH99              	100.00%		B3L565              	100.00%
H3ALQ1              	55.47%		
H3AJS0              	12.30%		
Bootstrap support for H3BH99 as seed ortholog is 100%.
Bootstrap support for B3L565 as seed ortholog is 100%.

Group of orthologs #49. Best score 650 bits
Score difference with first non-orthologous sequence - L.chalumnae:650 P.knowlesi:389

H3AEE1              	100.00%		B3L4J4              	100.00%
H3BAQ9              	80.41%		
Bootstrap support for H3AEE1 as seed ortholog is 100%.
Bootstrap support for B3L4J4 as seed ortholog is 100%.

Group of orthologs #50. Best score 647 bits
Score difference with first non-orthologous sequence - L.chalumnae:647 P.knowlesi:392

H2ZXQ2              	100.00%		B3LCP8              	100.00%
H3ARY3              	40.38%		
H3B1G5              	6.59%		
Bootstrap support for H2ZXQ2 as seed ortholog is 100%.
Bootstrap support for B3LCP8 as seed ortholog is 100%.

Group of orthologs #51. Best score 647 bits
Score difference with first non-orthologous sequence - L.chalumnae:647 P.knowlesi:647

H3BB48              	100.00%		B3KZZ1              	100.00%
H3A405              	17.07%		
Bootstrap support for H3BB48 as seed ortholog is 100%.
Bootstrap support for B3KZZ1 as seed ortholog is 100%.

Group of orthologs #52. Best score 643 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.knowlesi:643

H3B696              	100.00%		B3L753              	100.00%
H3A0X9              	53.90%		
H3B6F8              	41.56%		
H3A468              	16.23%		
Bootstrap support for H3B696 as seed ortholog is 99%.
Bootstrap support for B3L753 as seed ortholog is 100%.

Group of orthologs #53. Best score 641 bits
Score difference with first non-orthologous sequence - L.chalumnae:641 P.knowlesi:641

H3AM97              	100.00%		B3L5F6              	100.00%
Bootstrap support for H3AM97 as seed ortholog is 100%.
Bootstrap support for B3L5F6 as seed ortholog is 100%.

Group of orthologs #54. Best score 640 bits
Score difference with first non-orthologous sequence - L.chalumnae:640 P.knowlesi:640

H2ZXA7              	100.00%		B3LAR0              	100.00%
Bootstrap support for H2ZXA7 as seed ortholog is 100%.
Bootstrap support for B3LAR0 as seed ortholog is 100%.

Group of orthologs #55. Best score 637 bits
Score difference with first non-orthologous sequence - L.chalumnae:379 P.knowlesi:637

H3A782              	100.00%		B3L6U2              	100.00%
Bootstrap support for H3A782 as seed ortholog is 100%.
Bootstrap support for B3L6U2 as seed ortholog is 100%.

Group of orthologs #56. Best score 636 bits
Score difference with first non-orthologous sequence - L.chalumnae:636 P.knowlesi:636

H3BEP4              	100.00%		B3L6Z9              	100.00%
Bootstrap support for H3BEP4 as seed ortholog is 100%.
Bootstrap support for B3L6Z9 as seed ortholog is 100%.

Group of orthologs #57. Best score 635 bits
Score difference with first non-orthologous sequence - L.chalumnae:21 P.knowlesi:635

H3BGI7              	100.00%		B3L7C9              	100.00%
Bootstrap support for H3BGI7 as seed ortholog is 62%.
Alternative seed ortholog is H3AW63 (21 bits away from this cluster)
Bootstrap support for B3L7C9 as seed ortholog is 100%.

Group of orthologs #58. Best score 629 bits
Score difference with first non-orthologous sequence - L.chalumnae:341 P.knowlesi:423

H3AYD3              	100.00%		B3L5Y4              	100.00%
Bootstrap support for H3AYD3 as seed ortholog is 100%.
Bootstrap support for B3L5Y4 as seed ortholog is 100%.

Group of orthologs #59. Best score 628 bits
Score difference with first non-orthologous sequence - L.chalumnae:443 P.knowlesi:324

H2ZZK0              	100.00%		B3LBS7              	100.00%
Bootstrap support for H2ZZK0 as seed ortholog is 100%.
Bootstrap support for B3LBS7 as seed ortholog is 100%.

Group of orthologs #60. Best score 626 bits
Score difference with first non-orthologous sequence - L.chalumnae:626 P.knowlesi:626

H3AHD8              	100.00%		B3L0U2              	100.00%
Bootstrap support for H3AHD8 as seed ortholog is 100%.
Bootstrap support for B3L0U2 as seed ortholog is 100%.

Group of orthologs #61. Best score 625 bits
Score difference with first non-orthologous sequence - L.chalumnae:512 P.knowlesi:625

H3ALQ7              	100.00%		B3L7I1              	100.00%
Bootstrap support for H3ALQ7 as seed ortholog is 100%.
Bootstrap support for B3L7I1 as seed ortholog is 100%.

Group of orthologs #62. Best score 618 bits
Score difference with first non-orthologous sequence - L.chalumnae:618 P.knowlesi:618

H2ZYP0              	100.00%		B3L402              	100.00%
Bootstrap support for H2ZYP0 as seed ortholog is 100%.
Bootstrap support for B3L402 as seed ortholog is 100%.

Group of orthologs #63. Best score 612 bits
Score difference with first non-orthologous sequence - L.chalumnae:612 P.knowlesi:612

H2ZRK0              	100.00%		B3L0I2              	100.00%
Bootstrap support for H2ZRK0 as seed ortholog is 100%.
Bootstrap support for B3L0I2 as seed ortholog is 100%.

Group of orthologs #64. Best score 608 bits
Score difference with first non-orthologous sequence - L.chalumnae:608 P.knowlesi:608

H3B4J0              	100.00%		B3L5D0              	100.00%
Bootstrap support for H3B4J0 as seed ortholog is 100%.
Bootstrap support for B3L5D0 as seed ortholog is 100%.

Group of orthologs #65. Best score 602 bits
Score difference with first non-orthologous sequence - L.chalumnae:344 P.knowlesi:247

H3AYJ2              	100.00%		B3LCM2              	100.00%
H3A6R4              	39.64%		
Bootstrap support for H3AYJ2 as seed ortholog is 100%.
Bootstrap support for B3LCM2 as seed ortholog is 100%.

Group of orthologs #66. Best score 599 bits
Score difference with first non-orthologous sequence - L.chalumnae:391 P.knowlesi:296

H3AQX3              	100.00%		B3LDD0              	100.00%
Bootstrap support for H3AQX3 as seed ortholog is 100%.
Bootstrap support for B3LDD0 as seed ortholog is 100%.

Group of orthologs #67. Best score 598 bits
Score difference with first non-orthologous sequence - L.chalumnae:546 P.knowlesi:598

H3A857              	100.00%		B3L4C8              	100.00%
Bootstrap support for H3A857 as seed ortholog is 100%.
Bootstrap support for B3L4C8 as seed ortholog is 100%.

Group of orthologs #68. Best score 597 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 P.knowlesi:597

H3AHV5              	100.00%		B3L193              	100.00%
Bootstrap support for H3AHV5 as seed ortholog is 100%.
Bootstrap support for B3L193 as seed ortholog is 100%.

Group of orthologs #69. Best score 595 bits
Score difference with first non-orthologous sequence - L.chalumnae:527 P.knowlesi:595

H3BFD1              	100.00%		B3L746              	100.00%
Bootstrap support for H3BFD1 as seed ortholog is 100%.
Bootstrap support for B3L746 as seed ortholog is 100%.

Group of orthologs #70. Best score 594 bits
Score difference with first non-orthologous sequence - L.chalumnae:594 P.knowlesi:594

H3A5F9              	100.00%		B3L0N2              	100.00%
Bootstrap support for H3A5F9 as seed ortholog is 100%.
Bootstrap support for B3L0N2 as seed ortholog is 100%.

Group of orthologs #71. Best score 593 bits
Score difference with first non-orthologous sequence - L.chalumnae:333 P.knowlesi:593

H3AKC7              	100.00%		B3KZB0              	100.00%
Bootstrap support for H3AKC7 as seed ortholog is 100%.
Bootstrap support for B3KZB0 as seed ortholog is 100%.

Group of orthologs #72. Best score 590 bits
Score difference with first non-orthologous sequence - L.chalumnae:590 P.knowlesi:590

H3AVK7              	100.00%		B3L866              	100.00%
Bootstrap support for H3AVK7 as seed ortholog is 100%.
Bootstrap support for B3L866 as seed ortholog is 100%.

Group of orthologs #73. Best score 582 bits
Score difference with first non-orthologous sequence - L.chalumnae:252 P.knowlesi:201

H3A7G0              	100.00%		B3L4Z9              	100.00%
H3A9W0              	46.83%		
Bootstrap support for H3A7G0 as seed ortholog is 100%.
Bootstrap support for B3L4Z9 as seed ortholog is 99%.

Group of orthologs #74. Best score 574 bits
Score difference with first non-orthologous sequence - L.chalumnae:401 P.knowlesi:574

H3AWE2              	100.00%		B3LCX4              	100.00%
Bootstrap support for H3AWE2 as seed ortholog is 100%.
Bootstrap support for B3LCX4 as seed ortholog is 100%.

Group of orthologs #75. Best score 573 bits
Score difference with first non-orthologous sequence - L.chalumnae:573 P.knowlesi:118

H3A861              	100.00%		B3LCL1              	100.00%
H3AQ38              	5.87%		
H2ZTU7              	5.47%		
Bootstrap support for H3A861 as seed ortholog is 100%.
Bootstrap support for B3LCL1 as seed ortholog is 98%.

Group of orthologs #76. Best score 573 bits
Score difference with first non-orthologous sequence - L.chalumnae:462 P.knowlesi:573

H3B528              	100.00%		B3L3V4              	100.00%
H3B7K3              	60.69%		
H2ZXR3              	20.00%		
Bootstrap support for H3B528 as seed ortholog is 100%.
Bootstrap support for B3L3V4 as seed ortholog is 100%.

Group of orthologs #77. Best score 571 bits
Score difference with first non-orthologous sequence - L.chalumnae:571 P.knowlesi:571

H2ZSS1              	100.00%		B3L997              	100.00%
Bootstrap support for H2ZSS1 as seed ortholog is 100%.
Bootstrap support for B3L997 as seed ortholog is 100%.

Group of orthologs #78. Best score 570 bits
Score difference with first non-orthologous sequence - L.chalumnae:297 P.knowlesi:438

H3AZF1              	100.00%		B3L9L0              	100.00%
H3AKS0              	35.22%		
Bootstrap support for H3AZF1 as seed ortholog is 100%.
Bootstrap support for B3L9L0 as seed ortholog is 100%.

Group of orthologs #79. Best score 566 bits
Score difference with first non-orthologous sequence - L.chalumnae:374 P.knowlesi:369

H3B5V2              	100.00%		B3L3Z3              	100.00%
H3BC85              	54.76%		
Bootstrap support for H3B5V2 as seed ortholog is 100%.
Bootstrap support for B3L3Z3 as seed ortholog is 100%.

Group of orthologs #80. Best score 563 bits
Score difference with first non-orthologous sequence - L.chalumnae:456 P.knowlesi:563

H3ACZ9              	100.00%		B3L892              	100.00%
H3B9Q4              	38.27%		
Bootstrap support for H3ACZ9 as seed ortholog is 100%.
Bootstrap support for B3L892 as seed ortholog is 100%.

Group of orthologs #81. Best score 562 bits
Score difference with first non-orthologous sequence - L.chalumnae:493 P.knowlesi:562

H2ZV38              	100.00%		B3KZW6              	100.00%
Bootstrap support for H2ZV38 as seed ortholog is 100%.
Bootstrap support for B3KZW6 as seed ortholog is 100%.

Group of orthologs #82. Best score 555 bits
Score difference with first non-orthologous sequence - L.chalumnae:555 P.knowlesi:555

H3B9L1              	100.00%		B3LB14              	100.00%
Bootstrap support for H3B9L1 as seed ortholog is 100%.
Bootstrap support for B3LB14 as seed ortholog is 100%.

Group of orthologs #83. Best score 554 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.knowlesi:285

H3B6N4              	100.00%		B3LAL6              	100.00%
H3ALX3              	40.68%		
H3AR00              	32.20%		
H3AMP2              	30.51%		
Bootstrap support for H3B6N4 as seed ortholog is 99%.
Bootstrap support for B3LAL6 as seed ortholog is 100%.

Group of orthologs #84. Best score 554 bits
Score difference with first non-orthologous sequence - L.chalumnae:554 P.knowlesi:554

H3APY1              	100.00%		B3L4B5              	100.00%
Bootstrap support for H3APY1 as seed ortholog is 100%.
Bootstrap support for B3L4B5 as seed ortholog is 100%.

Group of orthologs #85. Best score 552 bits
Score difference with first non-orthologous sequence - L.chalumnae:373 P.knowlesi:253

H3BIM2              	100.00%		B3LBM5              	100.00%
Bootstrap support for H3BIM2 as seed ortholog is 100%.
Bootstrap support for B3LBM5 as seed ortholog is 100%.

Group of orthologs #86. Best score 548 bits
Score difference with first non-orthologous sequence - L.chalumnae:548 P.knowlesi:179

H3B646              	100.00%		B3L3U9              	100.00%
Bootstrap support for H3B646 as seed ortholog is 100%.
Bootstrap support for B3L3U9 as seed ortholog is 99%.

Group of orthologs #87. Best score 546 bits
Score difference with first non-orthologous sequence - L.chalumnae:304 P.knowlesi:332

H3A1W8              	100.00%		B3L971              	100.00%
H3BEF1              	60.23%		
H3A6E9              	59.46%		
Bootstrap support for H3A1W8 as seed ortholog is 100%.
Bootstrap support for B3L971 as seed ortholog is 100%.

Group of orthologs #88. Best score 544 bits
Score difference with first non-orthologous sequence - L.chalumnae:320 P.knowlesi:314

H2ZRV2              	100.00%		B3L1P5              	100.00%
Bootstrap support for H2ZRV2 as seed ortholog is 100%.
Bootstrap support for B3L1P5 as seed ortholog is 100%.

Group of orthologs #89. Best score 543 bits
Score difference with first non-orthologous sequence - L.chalumnae:231 P.knowlesi:70

H3B556              	100.00%		B3LCI6              	100.00%
H3B1E3              	100.00%		B3L419              	100.00%
H3A6P4              	57.29%		
H2ZWK6              	38.15%		
M3XHC6              	30.67%		
H3AEG9              	9.76%		
H3A4T4              	8.93%		
H3AJ65              	6.34%		
H3AHS2              	5.68%		
Bootstrap support for H3B556 as seed ortholog is 100%.
Bootstrap support for H3B1E3 as seed ortholog is 99%.
Bootstrap support for B3LCI6 as seed ortholog is 64%.
Alternative seed ortholog is B3L5J2 (70 bits away from this cluster)
Bootstrap support for B3L419 as seed ortholog is 84%.

Group of orthologs #90. Best score 543 bits
Score difference with first non-orthologous sequence - L.chalumnae:543 P.knowlesi:543

H3BAN6              	100.00%		B3L8D7              	100.00%
H3AXW8              	26.36%		
Bootstrap support for H3BAN6 as seed ortholog is 100%.
Bootstrap support for B3L8D7 as seed ortholog is 100%.

Group of orthologs #91. Best score 539 bits
Score difference with first non-orthologous sequence - L.chalumnae:475 P.knowlesi:539

H3AM02              	100.00%		B3LCT4              	100.00%
Bootstrap support for H3AM02 as seed ortholog is 100%.
Bootstrap support for B3LCT4 as seed ortholog is 100%.

Group of orthologs #92. Best score 539 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.knowlesi:539

H3B3T4              	100.00%		B3L8E1              	100.00%
Bootstrap support for H3B3T4 as seed ortholog is 92%.
Bootstrap support for B3L8E1 as seed ortholog is 100%.

Group of orthologs #93. Best score 535 bits
Score difference with first non-orthologous sequence - L.chalumnae:535 P.knowlesi:535

H3B4J9              	100.00%		B3L2D7              	100.00%
Bootstrap support for H3B4J9 as seed ortholog is 100%.
Bootstrap support for B3L2D7 as seed ortholog is 100%.

Group of orthologs #94. Best score 535 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.knowlesi:142

H3BBC2              	100.00%		B3L619              	100.00%
Bootstrap support for H3BBC2 as seed ortholog is 99%.
Bootstrap support for B3L619 as seed ortholog is 100%.

Group of orthologs #95. Best score 527 bits
Score difference with first non-orthologous sequence - L.chalumnae:527 P.knowlesi:527

H3BFK3              	100.00%		B3L8T7              	100.00%
H3BGE3              	30.40%		
H3A0A9              	24.28%		
Bootstrap support for H3BFK3 as seed ortholog is 100%.
Bootstrap support for B3L8T7 as seed ortholog is 100%.

Group of orthologs #96. Best score 520 bits
Score difference with first non-orthologous sequence - L.chalumnae:520 P.knowlesi:520

H3A6E7              	100.00%		B3L1W5              	100.00%
Bootstrap support for H3A6E7 as seed ortholog is 100%.
Bootstrap support for B3L1W5 as seed ortholog is 100%.

Group of orthologs #97. Best score 520 bits
Score difference with first non-orthologous sequence - L.chalumnae:520 P.knowlesi:520

H3B206              	100.00%		B3LAJ1              	100.00%
Bootstrap support for H3B206 as seed ortholog is 100%.
Bootstrap support for B3LAJ1 as seed ortholog is 100%.

Group of orthologs #98. Best score 517 bits
Score difference with first non-orthologous sequence - L.chalumnae:517 P.knowlesi:517

H3AG06              	100.00%		B3L4W9              	100.00%
H3BAG6              	15.33%		
Bootstrap support for H3AG06 as seed ortholog is 100%.
Bootstrap support for B3L4W9 as seed ortholog is 100%.

Group of orthologs #99. Best score 515 bits
Score difference with first non-orthologous sequence - L.chalumnae:515 P.knowlesi:413

H3B8B4              	100.00%		B3KZR4              	100.00%
Bootstrap support for H3B8B4 as seed ortholog is 100%.
Bootstrap support for B3KZR4 as seed ortholog is 100%.

Group of orthologs #100. Best score 515 bits
Score difference with first non-orthologous sequence - L.chalumnae:232 P.knowlesi:345

H3B659              	100.00%		B3L794              	100.00%
Bootstrap support for H3B659 as seed ortholog is 100%.
Bootstrap support for B3L794 as seed ortholog is 100%.

Group of orthologs #101. Best score 514 bits
Score difference with first non-orthologous sequence - L.chalumnae:375 P.knowlesi:514

H3AHS7              	100.00%		B3L4H0              	100.00%
Bootstrap support for H3AHS7 as seed ortholog is 100%.
Bootstrap support for B3L4H0 as seed ortholog is 100%.

Group of orthologs #102. Best score 513 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.knowlesi:281

H3B1M4              	100.00%		B3LBS6              	100.00%
H3A0Z7              	8.01%		
Bootstrap support for H3B1M4 as seed ortholog is 99%.
Bootstrap support for B3LBS6 as seed ortholog is 100%.

Group of orthologs #103. Best score 509 bits
Score difference with first non-orthologous sequence - L.chalumnae:509 P.knowlesi:462

H3BHY3              	100.00%		B3L7W9              	100.00%
Bootstrap support for H3BHY3 as seed ortholog is 100%.
Bootstrap support for B3L7W9 as seed ortholog is 100%.

Group of orthologs #104. Best score 506 bits
Score difference with first non-orthologous sequence - L.chalumnae:338 P.knowlesi:333

H3B5C3              	100.00%		B3L0Q5              	100.00%
H2ZY90              	58.53%		
Bootstrap support for H3B5C3 as seed ortholog is 100%.
Bootstrap support for B3L0Q5 as seed ortholog is 100%.

Group of orthologs #105. Best score 502 bits
Score difference with first non-orthologous sequence - L.chalumnae:22 P.knowlesi:502

H3A8H4              	100.00%		B3L8U0              	100.00%
H3A979              	46.39%		
H3B961              	35.95%		
Bootstrap support for H3A8H4 as seed ortholog is 66%.
Alternative seed ortholog is H3AF09 (22 bits away from this cluster)
Bootstrap support for B3L8U0 as seed ortholog is 100%.

Group of orthologs #106. Best score 500 bits
Score difference with first non-orthologous sequence - L.chalumnae:500 P.knowlesi:236

H3BBN1              	100.00%		B3L682              	100.00%
Bootstrap support for H3BBN1 as seed ortholog is 100%.
Bootstrap support for B3L682 as seed ortholog is 100%.

Group of orthologs #107. Best score 498 bits
Score difference with first non-orthologous sequence - L.chalumnae:279 P.knowlesi:498

H3BED7              	100.00%		B3L4F8              	100.00%
H3BFI3              	50.07%		
H3A4M1              	44.48%		
H3BG45              	26.11%		
Bootstrap support for H3BED7 as seed ortholog is 100%.
Bootstrap support for B3L4F8 as seed ortholog is 100%.

Group of orthologs #108. Best score 496 bits
Score difference with first non-orthologous sequence - L.chalumnae:357 P.knowlesi:496

H3AAK0              	100.00%		B3LD39              	100.00%
Bootstrap support for H3AAK0 as seed ortholog is 100%.
Bootstrap support for B3LD39 as seed ortholog is 100%.

Group of orthologs #109. Best score 496 bits
Score difference with first non-orthologous sequence - L.chalumnae:496 P.knowlesi:496

H3ALT2              	100.00%		B3LD12              	100.00%
Bootstrap support for H3ALT2 as seed ortholog is 100%.
Bootstrap support for B3LD12 as seed ortholog is 100%.

Group of orthologs #110. Best score 490 bits
Score difference with first non-orthologous sequence - L.chalumnae:490 P.knowlesi:490

H3BEP0              	100.00%		B3L9R6              	100.00%
Bootstrap support for H3BEP0 as seed ortholog is 100%.
Bootstrap support for B3L9R6 as seed ortholog is 100%.

Group of orthologs #111. Best score 486 bits
Score difference with first non-orthologous sequence - L.chalumnae:332 P.knowlesi:297

H3AHA1              	100.00%		B3L6I2              	100.00%
Bootstrap support for H3AHA1 as seed ortholog is 100%.
Bootstrap support for B3L6I2 as seed ortholog is 100%.

Group of orthologs #112. Best score 481 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.knowlesi:481

H3AN71              	100.00%		B3L2S3              	100.00%
Bootstrap support for H3AN71 as seed ortholog is 99%.
Bootstrap support for B3L2S3 as seed ortholog is 100%.

Group of orthologs #113. Best score 480 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 P.knowlesi:307

H3ACR9              	100.00%		B3L9V8              	100.00%
H3B5A9              	23.52%		
Bootstrap support for H3ACR9 as seed ortholog is 99%.
Bootstrap support for B3L9V8 as seed ortholog is 100%.

Group of orthologs #114. Best score 480 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.knowlesi:66

H3B8R3              	100.00%		B3KZN7              	100.00%
H3AQ74              	79.71%		
Bootstrap support for H3B8R3 as seed ortholog is 99%.
Bootstrap support for B3KZN7 as seed ortholog is 98%.

Group of orthologs #115. Best score 478 bits
Score difference with first non-orthologous sequence - L.chalumnae:478 P.knowlesi:478

H3AXY9              	100.00%		B3L240              	100.00%
H3ABQ3              	45.71%		
Bootstrap support for H3AXY9 as seed ortholog is 100%.
Bootstrap support for B3L240 as seed ortholog is 100%.

Group of orthologs #116. Best score 478 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 P.knowlesi:478

H3AKB8              	100.00%		B3L8C2              	100.00%
Bootstrap support for H3AKB8 as seed ortholog is 99%.
Bootstrap support for B3L8C2 as seed ortholog is 100%.

Group of orthologs #117. Best score 477 bits
Score difference with first non-orthologous sequence - L.chalumnae:477 P.knowlesi:477

H3B2Y2              	100.00%		B3LAR4              	100.00%
Bootstrap support for H3B2Y2 as seed ortholog is 100%.
Bootstrap support for B3LAR4 as seed ortholog is 100%.

Group of orthologs #118. Best score 473 bits
Score difference with first non-orthologous sequence - L.chalumnae:473 P.knowlesi:261

H3A5W6              	100.00%		B3KZB9              	100.00%
H3A6A5              	44.23%		
H3AQR5              	37.52%		
H2ZUZ8              	5.16%		
Bootstrap support for H3A5W6 as seed ortholog is 100%.
Bootstrap support for B3KZB9 as seed ortholog is 100%.

Group of orthologs #119. Best score 472 bits
Score difference with first non-orthologous sequence - L.chalumnae:472 P.knowlesi:334

H3AJ76              	100.00%		B3L633              	100.00%
H2ZY13              	43.02%		
Bootstrap support for H3AJ76 as seed ortholog is 100%.
Bootstrap support for B3L633 as seed ortholog is 99%.

Group of orthologs #120. Best score 471 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 P.knowlesi:207

H3A672              	100.00%		B3KZ01              	100.00%
Bootstrap support for H3A672 as seed ortholog is 99%.
Bootstrap support for B3KZ01 as seed ortholog is 99%.

Group of orthologs #121. Best score 470 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.knowlesi:470

H3B5Y6              	100.00%		B3L3U5              	100.00%
Bootstrap support for H3B5Y6 as seed ortholog is 98%.
Bootstrap support for B3L3U5 as seed ortholog is 100%.

Group of orthologs #122. Best score 468 bits
Score difference with first non-orthologous sequence - L.chalumnae:468 P.knowlesi:468

H3A579              	100.00%		B3L694              	100.00%
Bootstrap support for H3A579 as seed ortholog is 100%.
Bootstrap support for B3L694 as seed ortholog is 100%.

Group of orthologs #123. Best score 467 bits
Score difference with first non-orthologous sequence - L.chalumnae:467 P.knowlesi:134

H3AXJ1              	100.00%		B3L4Y5              	100.00%
Bootstrap support for H3AXJ1 as seed ortholog is 100%.
Bootstrap support for B3L4Y5 as seed ortholog is 98%.

Group of orthologs #124. Best score 467 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.knowlesi:467

H3BIH2              	100.00%		B3L654              	100.00%
Bootstrap support for H3BIH2 as seed ortholog is 90%.
Bootstrap support for B3L654 as seed ortholog is 100%.

Group of orthologs #125. Best score 466 bits
Score difference with first non-orthologous sequence - L.chalumnae:182 P.knowlesi:229

H3ALM5              	100.00%		B3L776              	100.00%
Bootstrap support for H3ALM5 as seed ortholog is 99%.
Bootstrap support for B3L776 as seed ortholog is 99%.

Group of orthologs #126. Best score 465 bits
Score difference with first non-orthologous sequence - L.chalumnae:465 P.knowlesi:465

H3BBQ3              	100.00%		B3LD69              	100.00%
H3B0F5              	54.44%		
H3AYA8              	30.07%		
Bootstrap support for H3BBQ3 as seed ortholog is 100%.
Bootstrap support for B3LD69 as seed ortholog is 100%.

Group of orthologs #127. Best score 465 bits
Score difference with first non-orthologous sequence - L.chalumnae:465 P.knowlesi:465

H3A8E3              	100.00%		B3L2N9              	100.00%
H3A389              	66.25%		
Bootstrap support for H3A8E3 as seed ortholog is 100%.
Bootstrap support for B3L2N9 as seed ortholog is 100%.

Group of orthologs #128. Best score 463 bits
Score difference with first non-orthologous sequence - L.chalumnae:463 P.knowlesi:463

H3AYK6              	100.00%		B3L2P2              	100.00%
Bootstrap support for H3AYK6 as seed ortholog is 100%.
Bootstrap support for B3L2P2 as seed ortholog is 100%.

Group of orthologs #129. Best score 459 bits
Score difference with first non-orthologous sequence - L.chalumnae:459 P.knowlesi:459

H3AIE0              	100.00%		B3L2M5              	100.00%
H3A423              	38.42%		
Bootstrap support for H3AIE0 as seed ortholog is 100%.
Bootstrap support for B3L2M5 as seed ortholog is 100%.

Group of orthologs #130. Best score 458 bits
Score difference with first non-orthologous sequence - L.chalumnae:334 P.knowlesi:458

H3B7T9              	100.00%		B3L3B3              	100.00%
H3AVD0              	62.14%		
Bootstrap support for H3B7T9 as seed ortholog is 100%.
Bootstrap support for B3L3B3 as seed ortholog is 100%.

Group of orthologs #131. Best score 456 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.knowlesi:456

H3A826              	100.00%		B3LC85              	100.00%
H3ASY1              	58.40%		
H3ASS5              	47.47%		
Bootstrap support for H3A826 as seed ortholog is 95%.
Bootstrap support for B3LC85 as seed ortholog is 100%.

Group of orthologs #132. Best score 456 bits
Score difference with first non-orthologous sequence - L.chalumnae:307 P.knowlesi:456

H3B6I7              	100.00%		B3L7W8              	100.00%
Bootstrap support for H3B6I7 as seed ortholog is 100%.
Bootstrap support for B3L7W8 as seed ortholog is 100%.

Group of orthologs #133. Best score 455 bits
Score difference with first non-orthologous sequence - L.chalumnae:455 P.knowlesi:125

H3AIE7              	100.00%		B3L3A6              	100.00%
Bootstrap support for H3AIE7 as seed ortholog is 100%.
Bootstrap support for B3L3A6 as seed ortholog is 99%.

Group of orthologs #134. Best score 453 bits
Score difference with first non-orthologous sequence - L.chalumnae:453 P.knowlesi:453

H3BI07              	100.00%		B3L613              	100.00%
Bootstrap support for H3BI07 as seed ortholog is 100%.
Bootstrap support for B3L613 as seed ortholog is 100%.

Group of orthologs #135. Best score 447 bits
Score difference with first non-orthologous sequence - L.chalumnae:447 P.knowlesi:447

H2ZW51              	100.00%		B3L7S4              	100.00%
Bootstrap support for H2ZW51 as seed ortholog is 100%.
Bootstrap support for B3L7S4 as seed ortholog is 100%.

Group of orthologs #136. Best score 445 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.knowlesi:445

H3AHF6              	100.00%		B3L5H4              	100.00%
H3B1Z2              	37.38%		
Bootstrap support for H3AHF6 as seed ortholog is 99%.
Bootstrap support for B3L5H4 as seed ortholog is 100%.

Group of orthologs #137. Best score 443 bits
Score difference with first non-orthologous sequence - L.chalumnae:220 P.knowlesi:321

H3A2F9              	100.00%		B3L4N6              	100.00%
H3A126              	34.31%		
Bootstrap support for H3A2F9 as seed ortholog is 100%.
Bootstrap support for B3L4N6 as seed ortholog is 100%.

Group of orthologs #138. Best score 443 bits
Score difference with first non-orthologous sequence - L.chalumnae:195 P.knowlesi:443

H3ARK4              	100.00%		B3L729              	100.00%
H3AHD4              	6.20%		
Bootstrap support for H3ARK4 as seed ortholog is 99%.
Bootstrap support for B3L729 as seed ortholog is 100%.

Group of orthologs #139. Best score 443 bits
Score difference with first non-orthologous sequence - L.chalumnae:246 P.knowlesi:443

H3AE96              	100.00%		B3L351              	100.00%
Bootstrap support for H3AE96 as seed ortholog is 100%.
Bootstrap support for B3L351 as seed ortholog is 100%.

Group of orthologs #140. Best score 443 bits
Score difference with first non-orthologous sequence - L.chalumnae:302 P.knowlesi:443

H3B5L6              	100.00%		B3L6L5              	100.00%
Bootstrap support for H3B5L6 as seed ortholog is 99%.
Bootstrap support for B3L6L5 as seed ortholog is 100%.

Group of orthologs #141. Best score 443 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 P.knowlesi:158

H3B172              	100.00%		B3LBY6              	100.00%
Bootstrap support for H3B172 as seed ortholog is 99%.
Bootstrap support for B3LBY6 as seed ortholog is 99%.

Group of orthologs #142. Best score 440 bits
Score difference with first non-orthologous sequence - L.chalumnae:269 P.knowlesi:440

H3BHP5              	100.00%		B3KZQ8              	100.00%
Bootstrap support for H3BHP5 as seed ortholog is 100%.
Bootstrap support for B3KZQ8 as seed ortholog is 100%.

Group of orthologs #143. Best score 438 bits
Score difference with first non-orthologous sequence - L.chalumnae:438 P.knowlesi:438

H3B1E7              	100.00%		B3L6G7              	100.00%
Bootstrap support for H3B1E7 as seed ortholog is 100%.
Bootstrap support for B3L6G7 as seed ortholog is 100%.

Group of orthologs #144. Best score 437 bits
Score difference with first non-orthologous sequence - L.chalumnae:437 P.knowlesi:437

H2ZYS3              	100.00%		B3LAN7              	100.00%
H3A6P8              	46.65%		
Bootstrap support for H2ZYS3 as seed ortholog is 100%.
Bootstrap support for B3LAN7 as seed ortholog is 100%.

Group of orthologs #145. Best score 436 bits
Score difference with first non-orthologous sequence - L.chalumnae:436 P.knowlesi:436

H3A050              	100.00%		B3LBE8              	100.00%
Bootstrap support for H3A050 as seed ortholog is 100%.
Bootstrap support for B3LBE8 as seed ortholog is 100%.

Group of orthologs #146. Best score 435 bits
Score difference with first non-orthologous sequence - L.chalumnae:435 P.knowlesi:435

H3AIE9              	100.00%		B3LA33              	100.00%
Bootstrap support for H3AIE9 as seed ortholog is 100%.
Bootstrap support for B3LA33 as seed ortholog is 100%.

Group of orthologs #147. Best score 433 bits
Score difference with first non-orthologous sequence - L.chalumnae:433 P.knowlesi:433

H3B8Y9              	100.00%		B3L5Q6              	100.00%
H3B7N0              	58.89%		
Bootstrap support for H3B8Y9 as seed ortholog is 100%.
Bootstrap support for B3L5Q6 as seed ortholog is 100%.

Group of orthologs #148. Best score 430 bits
Score difference with first non-orthologous sequence - L.chalumnae:282 P.knowlesi:270

H3ANZ0              	100.00%		B3KZP7              	100.00%
Bootstrap support for H3ANZ0 as seed ortholog is 100%.
Bootstrap support for B3KZP7 as seed ortholog is 100%.

Group of orthologs #149. Best score 429 bits
Score difference with first non-orthologous sequence - L.chalumnae:429 P.knowlesi:177

H3BAF3              	100.00%		B3L2Q5              	100.00%
H3B6J5              	8.28%		
Bootstrap support for H3BAF3 as seed ortholog is 100%.
Bootstrap support for B3L2Q5 as seed ortholog is 99%.

Group of orthologs #150. Best score 428 bits
Score difference with first non-orthologous sequence - L.chalumnae:428 P.knowlesi:428

H3A0G7              	100.00%		B3LAH4              	100.00%
Bootstrap support for H3A0G7 as seed ortholog is 100%.
Bootstrap support for B3LAH4 as seed ortholog is 100%.

Group of orthologs #151. Best score 426 bits
Score difference with first non-orthologous sequence - L.chalumnae:206 P.knowlesi:154

H3AGK3              	100.00%		B3LCA3              	100.00%
Bootstrap support for H3AGK3 as seed ortholog is 99%.
Bootstrap support for B3LCA3 as seed ortholog is 99%.

Group of orthologs #152. Best score 423 bits
Score difference with first non-orthologous sequence - L.chalumnae:299 P.knowlesi:351

H3AI71              	100.00%		B3L8S5              	100.00%
Bootstrap support for H3AI71 as seed ortholog is 100%.
Bootstrap support for B3L8S5 as seed ortholog is 100%.

Group of orthologs #153. Best score 419 bits
Score difference with first non-orthologous sequence - L.chalumnae:419 P.knowlesi:419

H3AI66              	100.00%		B3L287              	100.00%
Bootstrap support for H3AI66 as seed ortholog is 100%.
Bootstrap support for B3L287 as seed ortholog is 100%.

Group of orthologs #154. Best score 418 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.knowlesi:173

H3B1B6              	100.00%		B3L0G9              	100.00%
Bootstrap support for H3B1B6 as seed ortholog is 99%.
Bootstrap support for B3L0G9 as seed ortholog is 100%.

Group of orthologs #155. Best score 417 bits
Score difference with first non-orthologous sequence - L.chalumnae:417 P.knowlesi:417

H3AST4              	100.00%		B3L9D3              	100.00%
H3A702              	18.89%		
Bootstrap support for H3AST4 as seed ortholog is 100%.
Bootstrap support for B3L9D3 as seed ortholog is 100%.

Group of orthologs #156. Best score 416 bits
Score difference with first non-orthologous sequence - L.chalumnae:241 P.knowlesi:302

H3ANX5              	100.00%		B3L4U7              	100.00%
Bootstrap support for H3ANX5 as seed ortholog is 100%.
Bootstrap support for B3L4U7 as seed ortholog is 100%.

Group of orthologs #157. Best score 416 bits
Score difference with first non-orthologous sequence - L.chalumnae:206 P.knowlesi:159

H3B4S4              	100.00%		B3L3M4              	100.00%
Bootstrap support for H3B4S4 as seed ortholog is 100%.
Bootstrap support for B3L3M4 as seed ortholog is 100%.

Group of orthologs #158. Best score 416 bits
Score difference with first non-orthologous sequence - L.chalumnae:416 P.knowlesi:416

H3AZU8              	100.00%		B3L9M2              	100.00%
Bootstrap support for H3AZU8 as seed ortholog is 100%.
Bootstrap support for B3L9M2 as seed ortholog is 100%.

Group of orthologs #159. Best score 415 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 P.knowlesi:84

H3AJJ4              	100.00%		B3L611              	100.00%
H3AAB0              	63.94%		
H3ARP6              	54.38%		
H3AXU8              	43.53%		
Bootstrap support for H3AJJ4 as seed ortholog is 98%.
Bootstrap support for B3L611 as seed ortholog is 96%.

Group of orthologs #160. Best score 414 bits
Score difference with first non-orthologous sequence - L.chalumnae:414 P.knowlesi:414

H3AEX7              	100.00%		B3L0B3              	100.00%
Bootstrap support for H3AEX7 as seed ortholog is 100%.
Bootstrap support for B3L0B3 as seed ortholog is 100%.

Group of orthologs #161. Best score 411 bits
Score difference with first non-orthologous sequence - L.chalumnae:300 P.knowlesi:411

H3A1L6              	100.00%		B3LBY5              	100.00%
Bootstrap support for H3A1L6 as seed ortholog is 100%.
Bootstrap support for B3LBY5 as seed ortholog is 100%.

Group of orthologs #162. Best score 408 bits
Score difference with first non-orthologous sequence - L.chalumnae:408 P.knowlesi:408

H3ASK0              	100.00%		B3L4D2              	100.00%
Bootstrap support for H3ASK0 as seed ortholog is 100%.
Bootstrap support for B3L4D2 as seed ortholog is 100%.

Group of orthologs #163. Best score 406 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.knowlesi:94

H3AXC2              	100.00%		B3LBI8              	100.00%
Bootstrap support for H3AXC2 as seed ortholog is 97%.
Bootstrap support for B3LBI8 as seed ortholog is 88%.

Group of orthologs #164. Best score 404 bits
Score difference with first non-orthologous sequence - L.chalumnae:404 P.knowlesi:309

H3BII8              	100.00%		B3LD11              	100.00%
H3AND8              	21.66%		
Bootstrap support for H3BII8 as seed ortholog is 100%.
Bootstrap support for B3LD11 as seed ortholog is 100%.

Group of orthologs #165. Best score 404 bits
Score difference with first non-orthologous sequence - L.chalumnae:404 P.knowlesi:404

H3B800              	100.00%		B3LCI0              	100.00%
Bootstrap support for H3B800 as seed ortholog is 100%.
Bootstrap support for B3LCI0 as seed ortholog is 100%.

Group of orthologs #166. Best score 402 bits
Score difference with first non-orthologous sequence - L.chalumnae:402 P.knowlesi:402

H2ZTY7              	100.00%		B3LB47              	100.00%
Bootstrap support for H2ZTY7 as seed ortholog is 100%.
Bootstrap support for B3LB47 as seed ortholog is 100%.

Group of orthologs #167. Best score 400 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.knowlesi:81

H3BFY5              	100.00%		B3L454              	100.00%
Bootstrap support for H3BFY5 as seed ortholog is 99%.
Bootstrap support for B3L454 as seed ortholog is 99%.

Group of orthologs #168. Best score 398 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.knowlesi:398

H3AC80              	100.00%		B3L711              	100.00%
H3B6C9              	17.01%		
Bootstrap support for H3AC80 as seed ortholog is 78%.
Bootstrap support for B3L711 as seed ortholog is 100%.

Group of orthologs #169. Best score 397 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 P.knowlesi:45

H3AND9              	100.00%		B3L2D6              	100.00%
H3ATZ2              	22.54%		
H3BCV0              	11.75%		
Bootstrap support for H3AND9 as seed ortholog is 100%.
Bootstrap support for B3L2D6 as seed ortholog is 81%.

Group of orthologs #170. Best score 395 bits
Score difference with first non-orthologous sequence - L.chalumnae:395 P.knowlesi:395

H3AHL0              	100.00%		B3L299              	100.00%
Bootstrap support for H3AHL0 as seed ortholog is 100%.
Bootstrap support for B3L299 as seed ortholog is 100%.

Group of orthologs #171. Best score 394 bits
Score difference with first non-orthologous sequence - L.chalumnae:394 P.knowlesi:394

H2ZWM2              	100.00%		B3KZK7              	100.00%
Bootstrap support for H2ZWM2 as seed ortholog is 100%.
Bootstrap support for B3KZK7 as seed ortholog is 100%.

Group of orthologs #172. Best score 390 bits
Score difference with first non-orthologous sequence - L.chalumnae:390 P.knowlesi:229

H3AT42              	100.00%		B3LAV4              	100.00%
H3AWZ8              	51.66%		
Bootstrap support for H3AT42 as seed ortholog is 100%.
Bootstrap support for B3LAV4 as seed ortholog is 100%.

Group of orthologs #173. Best score 388 bits
Score difference with first non-orthologous sequence - L.chalumnae:279 P.knowlesi:388

H2ZUG2              	100.00%		B3L4H6              	100.00%
Bootstrap support for H2ZUG2 as seed ortholog is 100%.
Bootstrap support for B3L4H6 as seed ortholog is 100%.

Group of orthologs #174. Best score 388 bits
Score difference with first non-orthologous sequence - L.chalumnae:388 P.knowlesi:388

H3AH00              	100.00%		B3L4Y1              	100.00%
Bootstrap support for H3AH00 as seed ortholog is 100%.
Bootstrap support for B3L4Y1 as seed ortholog is 100%.

Group of orthologs #175. Best score 386 bits
Score difference with first non-orthologous sequence - L.chalumnae:386 P.knowlesi:386

H3BBB9              	100.00%		B3KZ79              	100.00%
H3ALP2              	33.81%		
H3B8J9              	27.15%		
H2ZRR1              	9.95%		
Bootstrap support for H3BBB9 as seed ortholog is 100%.
Bootstrap support for B3KZ79 as seed ortholog is 100%.

Group of orthologs #176. Best score 385 bits
Score difference with first non-orthologous sequence - L.chalumnae:385 P.knowlesi:385

H3AGD0              	100.00%		B3L3C9              	100.00%
Bootstrap support for H3AGD0 as seed ortholog is 100%.
Bootstrap support for B3L3C9 as seed ortholog is 100%.

Group of orthologs #177. Best score 383 bits
Score difference with first non-orthologous sequence - L.chalumnae:304 P.knowlesi:131

H3AP88              	100.00%		B3L6H8              	100.00%
Bootstrap support for H3AP88 as seed ortholog is 100%.
Bootstrap support for B3L6H8 as seed ortholog is 100%.

Group of orthologs #178. Best score 382 bits
Score difference with first non-orthologous sequence - L.chalumnae:382 P.knowlesi:144

H3ATJ8              	100.00%		B3L7D9              	100.00%
H3AAG4              	61.52%		
Bootstrap support for H3ATJ8 as seed ortholog is 100%.
Bootstrap support for B3L7D9 as seed ortholog is 99%.

Group of orthologs #179. Best score 381 bits
Score difference with first non-orthologous sequence - L.chalumnae:268 P.knowlesi:79

H3AQW1              	100.00%		B3L1F8              	100.00%
Bootstrap support for H3AQW1 as seed ortholog is 89%.
Bootstrap support for B3L1F8 as seed ortholog is 88%.

Group of orthologs #180. Best score 379 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.knowlesi:17

H3BA28              	100.00%		B3L2U9              	100.00%
H3AMF8              	94.18%		
Bootstrap support for H3BA28 as seed ortholog is 99%.
Bootstrap support for B3L2U9 as seed ortholog is 71%.
Alternative seed ortholog is B3L2S0 (17 bits away from this cluster)

Group of orthologs #181. Best score 379 bits
Score difference with first non-orthologous sequence - L.chalumnae:379 P.knowlesi:152

H3A9R5              	100.00%		B3L8R5              	100.00%
Bootstrap support for H3A9R5 as seed ortholog is 100%.
Bootstrap support for B3L8R5 as seed ortholog is 99%.

Group of orthologs #182. Best score 378 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 P.knowlesi:159

H3AGC7              	100.00%		B3L5Z1              	100.00%
Bootstrap support for H3AGC7 as seed ortholog is 99%.
Bootstrap support for B3L5Z1 as seed ortholog is 99%.

Group of orthologs #183. Best score 377 bits
Score difference with first non-orthologous sequence - L.chalumnae:377 P.knowlesi:377

H3AHP8              	100.00%		B3L6G4              	100.00%
H3BFM4              	41.18%		
Bootstrap support for H3AHP8 as seed ortholog is 100%.
Bootstrap support for B3L6G4 as seed ortholog is 100%.

Group of orthologs #184. Best score 376 bits
Score difference with first non-orthologous sequence - L.chalumnae:376 P.knowlesi:376

H3AWH5              	100.00%		B3L7D0              	100.00%
H3AW35              	70.04%		
Bootstrap support for H3AWH5 as seed ortholog is 100%.
Bootstrap support for B3L7D0 as seed ortholog is 100%.

Group of orthologs #185. Best score 375 bits
Score difference with first non-orthologous sequence - L.chalumnae:375 P.knowlesi:375

H3ABN2              	100.00%		B3L6J8              	100.00%
Bootstrap support for H3ABN2 as seed ortholog is 100%.
Bootstrap support for B3L6J8 as seed ortholog is 100%.

Group of orthologs #186. Best score 375 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 P.knowlesi:330

H3B5L5              	100.00%		B3L122              	100.00%
Bootstrap support for H3B5L5 as seed ortholog is 100%.
Bootstrap support for B3L122 as seed ortholog is 100%.

Group of orthologs #187. Best score 374 bits
Score difference with first non-orthologous sequence - L.chalumnae:374 P.knowlesi:374

H3A2G3              	100.00%		B3L4N7              	100.00%
Bootstrap support for H3A2G3 as seed ortholog is 100%.
Bootstrap support for B3L4N7 as seed ortholog is 100%.

Group of orthologs #188. Best score 372 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.knowlesi:372

H3BBH3              	100.00%		B3L878              	100.00%
Bootstrap support for H3BBH3 as seed ortholog is 98%.
Bootstrap support for B3L878 as seed ortholog is 100%.

Group of orthologs #189. Best score 371 bits
Score difference with first non-orthologous sequence - L.chalumnae:371 P.knowlesi:371

H3AM09              	100.00%		B3L9W9              	100.00%
H3AKA5              	60.17%		
H3A3J8              	57.10%		
Bootstrap support for H3AM09 as seed ortholog is 100%.
Bootstrap support for B3L9W9 as seed ortholog is 100%.

Group of orthologs #190. Best score 370 bits
Score difference with first non-orthologous sequence - L.chalumnae:370 P.knowlesi:370

H3AYK7              	100.00%		B3L4L2              	100.00%
                    	       		B3LCB2              	13.97%
Bootstrap support for H3AYK7 as seed ortholog is 100%.
Bootstrap support for B3L4L2 as seed ortholog is 100%.

Group of orthologs #191. Best score 370 bits
Score difference with first non-orthologous sequence - L.chalumnae:370 P.knowlesi:370

H3ABS4              	100.00%		B3L8F2              	100.00%
Bootstrap support for H3ABS4 as seed ortholog is 100%.
Bootstrap support for B3L8F2 as seed ortholog is 100%.

Group of orthologs #192. Best score 369 bits
Score difference with first non-orthologous sequence - L.chalumnae:241 P.knowlesi:183

H3A6D2              	100.00%		B3L839              	100.00%
Bootstrap support for H3A6D2 as seed ortholog is 99%.
Bootstrap support for B3L839 as seed ortholog is 98%.

Group of orthologs #193. Best score 368 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 P.knowlesi:105

H3ACJ6              	100.00%		B3L472              	100.00%
H3AT64              	48.30%		
Bootstrap support for H3ACJ6 as seed ortholog is 100%.
Bootstrap support for B3L472 as seed ortholog is 99%.

Group of orthologs #194. Best score 368 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 P.knowlesi:60

H3BBZ5              	100.00%		B3L4M7              	100.00%
Bootstrap support for H3BBZ5 as seed ortholog is 100%.
Bootstrap support for B3L4M7 as seed ortholog is 97%.

Group of orthologs #195. Best score 367 bits
Score difference with first non-orthologous sequence - L.chalumnae:367 P.knowlesi:367

H3AA31              	100.00%		B3LCN2              	100.00%
H3A5M3              	57.81%		
H3AV53              	52.79%		
Bootstrap support for H3AA31 as seed ortholog is 100%.
Bootstrap support for B3LCN2 as seed ortholog is 100%.

Group of orthologs #196. Best score 367 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 P.knowlesi:367

H3ADI2              	100.00%		B3L699              	100.00%
Bootstrap support for H3ADI2 as seed ortholog is 100%.
Bootstrap support for B3L699 as seed ortholog is 100%.

Group of orthologs #197. Best score 367 bits
Score difference with first non-orthologous sequence - L.chalumnae:367 P.knowlesi:367

H3AZH8              	100.00%		B3L9U8              	100.00%
Bootstrap support for H3AZH8 as seed ortholog is 100%.
Bootstrap support for B3L9U8 as seed ortholog is 100%.

Group of orthologs #198. Best score 367 bits
Score difference with first non-orthologous sequence - L.chalumnae:283 P.knowlesi:367

H3BFQ8              	100.00%		B3L4H1              	100.00%
Bootstrap support for H3BFQ8 as seed ortholog is 100%.
Bootstrap support for B3L4H1 as seed ortholog is 100%.

Group of orthologs #199. Best score 366 bits
Score difference with first non-orthologous sequence - L.chalumnae:366 P.knowlesi:366

H3B8C2              	100.00%		B3L4G8              	100.00%
H3AYG2              	36.15%		
H3AXR7              	26.01%		
Bootstrap support for H3B8C2 as seed ortholog is 100%.
Bootstrap support for B3L4G8 as seed ortholog is 100%.

Group of orthologs #200. Best score 366 bits
Score difference with first non-orthologous sequence - L.chalumnae:366 P.knowlesi:366

H3BI66              	100.00%		B3L1Y4              	100.00%
Bootstrap support for H3BI66 as seed ortholog is 100%.
Bootstrap support for B3L1Y4 as seed ortholog is 100%.

Group of orthologs #201. Best score 365 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 P.knowlesi:133

H3ATP1              	100.00%		B3L8H3              	100.00%
H3BHL2              	100.00%		B3L6N3              	10.13%
H2ZUY8              	33.98%		
M3XIM1              	24.97%		
H3APP8              	20.53%		
H3AMX4              	17.70%		
H3AAN7              	10.48%		
H2ZSM1              	10.27%		
H3AP83              	7.81%		
Bootstrap support for H3ATP1 as seed ortholog is 82%.
Bootstrap support for H3BHL2 as seed ortholog is 81%.
Bootstrap support for B3L8H3 as seed ortholog is 99%.

Group of orthologs #202. Best score 364 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 P.knowlesi:364

H3BBQ4              	100.00%		B3LAE9              	100.00%
Bootstrap support for H3BBQ4 as seed ortholog is 100%.
Bootstrap support for B3LAE9 as seed ortholog is 100%.

Group of orthologs #203. Best score 363 bits
Score difference with first non-orthologous sequence - L.chalumnae:30 P.knowlesi:154

H3BI57              	100.00%		B3L755              	100.00%
H3AGI8              	42.86%		
M3XH50              	15.51%		
Bootstrap support for H3BI57 as seed ortholog is 82%.
Bootstrap support for B3L755 as seed ortholog is 99%.

Group of orthologs #204. Best score 362 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 P.knowlesi:362

M3XJ87              	100.00%		B3KZP9              	100.00%
Bootstrap support for M3XJ87 as seed ortholog is 99%.
Bootstrap support for B3KZP9 as seed ortholog is 100%.

Group of orthologs #205. Best score 361 bits
Score difference with first non-orthologous sequence - L.chalumnae:264 P.knowlesi:319

H3AR27              	100.00%		B3L2D4              	100.00%
H3AL16              	86.97%		
H3ADX1              	74.79%		
H3BB87              	34.45%		
Bootstrap support for H3AR27 as seed ortholog is 100%.
Bootstrap support for B3L2D4 as seed ortholog is 100%.

Group of orthologs #206. Best score 361 bits
Score difference with first non-orthologous sequence - L.chalumnae:361 P.knowlesi:361

H2ZYA8              	100.00%		B3L781              	100.00%
H3BDJ1              	43.48%		
H3AR52              	36.59%		
Bootstrap support for H2ZYA8 as seed ortholog is 100%.
Bootstrap support for B3L781 as seed ortholog is 100%.

Group of orthologs #207. Best score 359 bits
Score difference with first non-orthologous sequence - L.chalumnae:359 P.knowlesi:359

H3A2A4              	100.00%		B3LD14              	100.00%
Bootstrap support for H3A2A4 as seed ortholog is 100%.
Bootstrap support for B3LD14 as seed ortholog is 100%.

Group of orthologs #208. Best score 359 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 P.knowlesi:359

H3B2F0              	100.00%		B3L315              	100.00%
Bootstrap support for H3B2F0 as seed ortholog is 99%.
Bootstrap support for B3L315 as seed ortholog is 100%.

Group of orthologs #209. Best score 357 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 P.knowlesi:257

H3AXH7              	100.00%		B3L4H5              	100.00%
H3AGW0              	31.10%		
H3B9K5              	29.22%		
Bootstrap support for H3AXH7 as seed ortholog is 100%.
Bootstrap support for B3L4H5 as seed ortholog is 100%.

Group of orthologs #210. Best score 357 bits
Score difference with first non-orthologous sequence - L.chalumnae:357 P.knowlesi:357

H2ZZN4              	100.00%		B3L4J2              	100.00%
Bootstrap support for H2ZZN4 as seed ortholog is 100%.
Bootstrap support for B3L4J2 as seed ortholog is 100%.

Group of orthologs #211. Best score 356 bits
Score difference with first non-orthologous sequence - L.chalumnae:356 P.knowlesi:356

H3A547              	100.00%		B3KZ23              	100.00%
Bootstrap support for H3A547 as seed ortholog is 100%.
Bootstrap support for B3KZ23 as seed ortholog is 100%.

Group of orthologs #212. Best score 356 bits
Score difference with first non-orthologous sequence - L.chalumnae:278 P.knowlesi:356

H3B692              	100.00%		B3L623              	100.00%
Bootstrap support for H3B692 as seed ortholog is 100%.
Bootstrap support for B3L623 as seed ortholog is 100%.

Group of orthologs #213. Best score 354 bits
Score difference with first non-orthologous sequence - L.chalumnae:354 P.knowlesi:354

H3AMV4              	100.00%		B3L4Q7              	100.00%
Bootstrap support for H3AMV4 as seed ortholog is 100%.
Bootstrap support for B3L4Q7 as seed ortholog is 100%.

Group of orthologs #214. Best score 352 bits
Score difference with first non-orthologous sequence - L.chalumnae:352 P.knowlesi:205

M3XI24              	100.00%		B3L520              	100.00%
H3A7X9              	8.36%		
H3A9D1              	6.38%		
Bootstrap support for M3XI24 as seed ortholog is 100%.
Bootstrap support for B3L520 as seed ortholog is 100%.

Group of orthologs #215. Best score 352 bits
Score difference with first non-orthologous sequence - L.chalumnae:179 P.knowlesi:352

H3B4K5              	100.00%		B3LA52              	100.00%
Bootstrap support for H3B4K5 as seed ortholog is 99%.
Bootstrap support for B3LA52 as seed ortholog is 100%.

Group of orthologs #216. Best score 349 bits
Score difference with first non-orthologous sequence - L.chalumnae:281 P.knowlesi:349

H3AZV3              	100.00%		B3L021              	100.00%
Bootstrap support for H3AZV3 as seed ortholog is 100%.
Bootstrap support for B3L021 as seed ortholog is 100%.

Group of orthologs #217. Best score 349 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.knowlesi:136

H3B9K2              	100.00%		B3LBA1              	100.00%
Bootstrap support for H3B9K2 as seed ortholog is 98%.
Bootstrap support for B3LBA1 as seed ortholog is 99%.

Group of orthologs #218. Best score 348 bits
Score difference with first non-orthologous sequence - L.chalumnae:348 P.knowlesi:348

H3B4E4              	100.00%		B3L8L1              	100.00%
Bootstrap support for H3B4E4 as seed ortholog is 100%.
Bootstrap support for B3L8L1 as seed ortholog is 100%.

Group of orthologs #219. Best score 348 bits
Score difference with first non-orthologous sequence - L.chalumnae:348 P.knowlesi:348

H3B4Y5              	100.00%		B3LCC3              	100.00%
Bootstrap support for H3B4Y5 as seed ortholog is 100%.
Bootstrap support for B3LCC3 as seed ortholog is 100%.

Group of orthologs #220. Best score 347 bits
Score difference with first non-orthologous sequence - L.chalumnae:347 P.knowlesi:347

H2ZU31              	100.00%		B3LBD4              	100.00%
Bootstrap support for H2ZU31 as seed ortholog is 100%.
Bootstrap support for B3LBD4 as seed ortholog is 100%.

Group of orthologs #221. Best score 346 bits
Score difference with first non-orthologous sequence - L.chalumnae:346 P.knowlesi:346

H3ASP8              	100.00%		B3LAN9              	100.00%
Bootstrap support for H3ASP8 as seed ortholog is 100%.
Bootstrap support for B3LAN9 as seed ortholog is 100%.

Group of orthologs #222. Best score 345 bits
Score difference with first non-orthologous sequence - L.chalumnae:345 P.knowlesi:345

H3A6Y2              	100.00%		B3L0L1              	100.00%
H3AF78              	30.89%		
Bootstrap support for H3A6Y2 as seed ortholog is 100%.
Bootstrap support for B3L0L1 as seed ortholog is 100%.

Group of orthologs #223. Best score 344 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 P.knowlesi:189

H3AK78              	100.00%		B3L9J0              	100.00%
H2ZS69              	68.80%		
Bootstrap support for H3AK78 as seed ortholog is 99%.
Bootstrap support for B3L9J0 as seed ortholog is 100%.

Group of orthologs #224. Best score 344 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 P.knowlesi:344

H3A703              	100.00%		B3LAG9              	100.00%
Bootstrap support for H3A703 as seed ortholog is 100%.
Bootstrap support for B3LAG9 as seed ortholog is 100%.

Group of orthologs #225. Best score 342 bits
Score difference with first non-orthologous sequence - L.chalumnae:213 P.knowlesi:342

H3A516              	100.00%		B3L6T8              	100.00%
Bootstrap support for H3A516 as seed ortholog is 100%.
Bootstrap support for B3L6T8 as seed ortholog is 100%.

Group of orthologs #226. Best score 342 bits
Score difference with first non-orthologous sequence - L.chalumnae:297 P.knowlesi:342

H3A6Q8              	100.00%		B3LBS4              	100.00%
Bootstrap support for H3A6Q8 as seed ortholog is 100%.
Bootstrap support for B3LBS4 as seed ortholog is 100%.

Group of orthologs #227. Best score 342 bits
Score difference with first non-orthologous sequence - L.chalumnae:342 P.knowlesi:342

H3B8R6              	100.00%		B3LCC4              	100.00%
Bootstrap support for H3B8R6 as seed ortholog is 100%.
Bootstrap support for B3LCC4 as seed ortholog is 100%.

Group of orthologs #228. Best score 341 bits
Score difference with first non-orthologous sequence - L.chalumnae:184 P.knowlesi:341

H3B7P3              	100.00%		B3KZU1              	100.00%
Bootstrap support for H3B7P3 as seed ortholog is 100%.
Bootstrap support for B3KZU1 as seed ortholog is 100%.

Group of orthologs #229. Best score 341 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.knowlesi:341

M3XJT3              	100.00%		B3L9N1              	100.00%
Bootstrap support for M3XJT3 as seed ortholog is 99%.
Bootstrap support for B3L9N1 as seed ortholog is 100%.

Group of orthologs #230. Best score 340 bits
Score difference with first non-orthologous sequence - L.chalumnae:340 P.knowlesi:202

H2ZW02              	100.00%		B3L6N0              	100.00%
H3AXA5              	29.23%		
H3AWA2              	27.14%		
H3B7S7              	21.67%		
Bootstrap support for H2ZW02 as seed ortholog is 100%.
Bootstrap support for B3L6N0 as seed ortholog is 99%.

Group of orthologs #231. Best score 337 bits
Score difference with first non-orthologous sequence - L.chalumnae:337 P.knowlesi:337

H3BEB0              	100.00%		B3L6V4              	100.00%
Bootstrap support for H3BEB0 as seed ortholog is 100%.
Bootstrap support for B3L6V4 as seed ortholog is 100%.

Group of orthologs #232. Best score 336 bits
Score difference with first non-orthologous sequence - L.chalumnae:336 P.knowlesi:77

H2ZU93              	100.00%		B3L5B3              	100.00%
H3B892              	48.74%		
Bootstrap support for H2ZU93 as seed ortholog is 100%.
Bootstrap support for B3L5B3 as seed ortholog is 100%.

Group of orthologs #233. Best score 335 bits
Score difference with first non-orthologous sequence - L.chalumnae:335 P.knowlesi:335

H2ZWN8              	100.00%		B3L2A8              	100.00%
Bootstrap support for H2ZWN8 as seed ortholog is 100%.
Bootstrap support for B3L2A8 as seed ortholog is 100%.

Group of orthologs #234. Best score 335 bits
Score difference with first non-orthologous sequence - L.chalumnae:335 P.knowlesi:335

H3A1Z2              	100.00%		B3L8M2              	100.00%
Bootstrap support for H3A1Z2 as seed ortholog is 100%.
Bootstrap support for B3L8M2 as seed ortholog is 100%.

Group of orthologs #235. Best score 335 bits
Score difference with first non-orthologous sequence - L.chalumnae:335 P.knowlesi:335

H3AXQ9              	100.00%		B3LA93              	100.00%
Bootstrap support for H3AXQ9 as seed ortholog is 100%.
Bootstrap support for B3LA93 as seed ortholog is 100%.

Group of orthologs #236. Best score 334 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.knowlesi:206

H3ADK9              	100.00%		B3L322              	100.00%
H3AXE1              	100.00%		
Bootstrap support for H3ADK9 as seed ortholog is 98%.
Bootstrap support for H3AXE1 as seed ortholog is 98%.
Bootstrap support for B3L322 as seed ortholog is 100%.

Group of orthologs #237. Best score 334 bits
Score difference with first non-orthologous sequence - L.chalumnae:334 P.knowlesi:334

H3BDS6              	100.00%		B3LC55              	100.00%
Bootstrap support for H3BDS6 as seed ortholog is 100%.
Bootstrap support for B3LC55 as seed ortholog is 100%.

Group of orthologs #238. Best score 333 bits
Score difference with first non-orthologous sequence - L.chalumnae:287 P.knowlesi:333

H2ZU38              	100.00%		B3L3R5              	100.00%
H3ABG6              	45.78%		
Bootstrap support for H2ZU38 as seed ortholog is 100%.
Bootstrap support for B3L3R5 as seed ortholog is 100%.

Group of orthologs #239. Best score 333 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.knowlesi:333

H3AFN1              	100.00%		B3LDE8              	100.00%
Bootstrap support for H3AFN1 as seed ortholog is 100%.
Bootstrap support for B3LDE8 as seed ortholog is 100%.

Group of orthologs #240. Best score 332 bits
Score difference with first non-orthologous sequence - L.chalumnae:20 P.knowlesi:332

H3AZX5              	100.00%		B3LA75              	100.00%
Bootstrap support for H3AZX5 as seed ortholog is 71%.
Alternative seed ortholog is H3ALN3 (20 bits away from this cluster)
Bootstrap support for B3LA75 as seed ortholog is 100%.

Group of orthologs #241. Best score 330 bits
Score difference with first non-orthologous sequence - L.chalumnae:330 P.knowlesi:201

H2ZZW0              	100.00%		B3L873              	100.00%
Bootstrap support for H2ZZW0 as seed ortholog is 100%.
Bootstrap support for B3L873 as seed ortholog is 99%.

Group of orthologs #242. Best score 325 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 P.knowlesi:325

H3BB41              	100.00%		B3LBF1              	100.00%
Bootstrap support for H3BB41 as seed ortholog is 99%.
Bootstrap support for B3LBF1 as seed ortholog is 100%.

Group of orthologs #243. Best score 324 bits
Score difference with first non-orthologous sequence - L.chalumnae:259 P.knowlesi:324

H3AT05              	100.00%		B3L5B4              	100.00%
Bootstrap support for H3AT05 as seed ortholog is 100%.
Bootstrap support for B3L5B4 as seed ortholog is 100%.

Group of orthologs #244. Best score 324 bits
Score difference with first non-orthologous sequence - L.chalumnae:324 P.knowlesi:324

H3B5F1              	100.00%		B3LAL1              	100.00%
Bootstrap support for H3B5F1 as seed ortholog is 100%.
Bootstrap support for B3LAL1 as seed ortholog is 100%.

Group of orthologs #245. Best score 323 bits
Score difference with first non-orthologous sequence - L.chalumnae:323 P.knowlesi:323

H3BG71              	100.00%		B3L7S7              	100.00%
Bootstrap support for H3BG71 as seed ortholog is 100%.
Bootstrap support for B3L7S7 as seed ortholog is 100%.

Group of orthologs #246. Best score 322 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 P.knowlesi:221

H3ARA3              	100.00%		B3L6A1              	100.00%
H3B5N2              	100.00%		
H3BAQ6              	40.98%		
H3A3X6              	12.55%		
Bootstrap support for H3ARA3 as seed ortholog is 98%.
Bootstrap support for H3B5N2 as seed ortholog is 97%.
Bootstrap support for B3L6A1 as seed ortholog is 100%.

Group of orthologs #247. Best score 322 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.knowlesi:322

H2ZWY2              	100.00%		B3L538              	100.00%
Bootstrap support for H2ZWY2 as seed ortholog is 88%.
Bootstrap support for B3L538 as seed ortholog is 100%.

Group of orthologs #248. Best score 322 bits
Score difference with first non-orthologous sequence - L.chalumnae:322 P.knowlesi:322

H3BD51              	100.00%		B3L831              	100.00%
Bootstrap support for H3BD51 as seed ortholog is 100%.
Bootstrap support for B3L831 as seed ortholog is 100%.

Group of orthologs #249. Best score 321 bits
Score difference with first non-orthologous sequence - L.chalumnae:321 P.knowlesi:321

H3A8T1              	100.00%		B3L0L0              	100.00%
H3BFX4              	40.83%		
Bootstrap support for H3A8T1 as seed ortholog is 100%.
Bootstrap support for B3L0L0 as seed ortholog is 100%.

Group of orthologs #250. Best score 319 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.knowlesi:319

H3BAW4              	100.00%		B3L1X3              	100.00%
Bootstrap support for H3BAW4 as seed ortholog is 83%.
Bootstrap support for B3L1X3 as seed ortholog is 100%.

Group of orthologs #251. Best score 316 bits
Score difference with first non-orthologous sequence - L.chalumnae:316 P.knowlesi:316

H3AQ44              	100.00%		B3L691              	100.00%
Bootstrap support for H3AQ44 as seed ortholog is 100%.
Bootstrap support for B3L691 as seed ortholog is 100%.

Group of orthologs #252. Best score 316 bits
Score difference with first non-orthologous sequence - L.chalumnae:273 P.knowlesi:316

H3AVP9              	100.00%		B3L1T8              	100.00%
Bootstrap support for H3AVP9 as seed ortholog is 100%.
Bootstrap support for B3L1T8 as seed ortholog is 100%.

Group of orthologs #253. Best score 315 bits
Score difference with first non-orthologous sequence - L.chalumnae:217 P.knowlesi:315

H3ACG3              	100.00%		B3L1F7              	100.00%
H3B2X6              	54.62%		
Bootstrap support for H3ACG3 as seed ortholog is 100%.
Bootstrap support for B3L1F7 as seed ortholog is 100%.

Group of orthologs #254. Best score 314 bits
Score difference with first non-orthologous sequence - L.chalumnae:181 P.knowlesi:314

H3A141              	100.00%		B3L4K6              	100.00%
Bootstrap support for H3A141 as seed ortholog is 100%.
Bootstrap support for B3L4K6 as seed ortholog is 100%.

Group of orthologs #255. Best score 314 bits
Score difference with first non-orthologous sequence - L.chalumnae:213 P.knowlesi:314

H3AJZ4              	100.00%		B3L268              	100.00%
Bootstrap support for H3AJZ4 as seed ortholog is 100%.
Bootstrap support for B3L268 as seed ortholog is 100%.

Group of orthologs #256. Best score 314 bits
Score difference with first non-orthologous sequence - L.chalumnae:314 P.knowlesi:314

H3AZF0              	100.00%		B3L0I9              	100.00%
Bootstrap support for H3AZF0 as seed ortholog is 100%.
Bootstrap support for B3L0I9 as seed ortholog is 100%.

Group of orthologs #257. Best score 313 bits
Score difference with first non-orthologous sequence - L.chalumnae:224 P.knowlesi:313

H2ZXF8              	100.00%		B3L5A0              	100.00%
Bootstrap support for H2ZXF8 as seed ortholog is 100%.
Bootstrap support for B3L5A0 as seed ortholog is 100%.

Group of orthologs #258. Best score 311 bits
Score difference with first non-orthologous sequence - L.chalumnae:311 P.knowlesi:311

H3BDN1              	100.00%		B3L6F2              	100.00%
Bootstrap support for H3BDN1 as seed ortholog is 100%.
Bootstrap support for B3L6F2 as seed ortholog is 100%.

Group of orthologs #259. Best score 308 bits
Score difference with first non-orthologous sequence - L.chalumnae:308 P.knowlesi:308

H3BGZ0              	100.00%		B3L1L0              	100.00%
                    	       		B3L992              	99.72%
Bootstrap support for H3BGZ0 as seed ortholog is 100%.
Bootstrap support for B3L1L0 as seed ortholog is 100%.

Group of orthologs #260. Best score 308 bits
Score difference with first non-orthologous sequence - L.chalumnae:308 P.knowlesi:308

H3BGD3              	100.00%		B3L5A9              	100.00%
Bootstrap support for H3BGD3 as seed ortholog is 100%.
Bootstrap support for B3L5A9 as seed ortholog is 100%.

Group of orthologs #261. Best score 307 bits
Score difference with first non-orthologous sequence - L.chalumnae:307 P.knowlesi:307

H3APY0              	100.00%		B3KZ33              	100.00%
H3BA91              	60.38%		
Bootstrap support for H3APY0 as seed ortholog is 100%.
Bootstrap support for B3KZ33 as seed ortholog is 100%.

Group of orthologs #262. Best score 307 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.knowlesi:307

H3B838              	100.00%		B3L3N6              	100.00%
H3BA06              	47.55%		
Bootstrap support for H3B838 as seed ortholog is 99%.
Bootstrap support for B3L3N6 as seed ortholog is 100%.

Group of orthologs #263. Best score 306 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 P.knowlesi:95

H3AU41              	100.00%		B3LDG0              	100.00%
Bootstrap support for H3AU41 as seed ortholog is 99%.
Bootstrap support for B3LDG0 as seed ortholog is 98%.

Group of orthologs #264. Best score 303 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.knowlesi:122

H2ZTL2              	100.00%		B3L6M6              	100.00%
Bootstrap support for H2ZTL2 as seed ortholog is 99%.
Bootstrap support for B3L6M6 as seed ortholog is 99%.

Group of orthologs #265. Best score 302 bits
Score difference with first non-orthologous sequence - L.chalumnae:302 P.knowlesi:302

H2ZVT5              	100.00%		B3L6M4              	100.00%
Bootstrap support for H2ZVT5 as seed ortholog is 100%.
Bootstrap support for B3L6M4 as seed ortholog is 100%.

Group of orthologs #266. Best score 302 bits
Score difference with first non-orthologous sequence - L.chalumnae:174 P.knowlesi:302

H3BB10              	100.00%		B3L310              	100.00%
Bootstrap support for H3BB10 as seed ortholog is 99%.
Bootstrap support for B3L310 as seed ortholog is 100%.

Group of orthologs #267. Best score 301 bits
Score difference with first non-orthologous sequence - L.chalumnae:301 P.knowlesi:301

H3B3Q4              	100.00%		B3LAT9              	100.00%
Bootstrap support for H3B3Q4 as seed ortholog is 100%.
Bootstrap support for B3LAT9 as seed ortholog is 100%.

Group of orthologs #268. Best score 300 bits
Score difference with first non-orthologous sequence - L.chalumnae:300 P.knowlesi:300

H3B5R5              	100.00%		B3L504              	100.00%
H3BB55              	20.98%		
Bootstrap support for H3B5R5 as seed ortholog is 100%.
Bootstrap support for B3L504 as seed ortholog is 100%.

Group of orthologs #269. Best score 300 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.knowlesi:114

H3AQP2              	100.00%		B3L646              	100.00%
Bootstrap support for H3AQP2 as seed ortholog is 99%.
Bootstrap support for B3L646 as seed ortholog is 98%.

Group of orthologs #270. Best score 299 bits
Score difference with first non-orthologous sequence - L.chalumnae:299 P.knowlesi:299

H2ZZA0              	100.00%		B3L4U8              	100.00%
H3ATR1              	65.10%		
H3B379              	52.23%		
Bootstrap support for H2ZZA0 as seed ortholog is 100%.
Bootstrap support for B3L4U8 as seed ortholog is 100%.

Group of orthologs #271. Best score 299 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.knowlesi:299

H3A259              	100.00%		B3L228              	100.00%
H3A1V4              	63.73%		
Bootstrap support for H3A259 as seed ortholog is 99%.
Bootstrap support for B3L228 as seed ortholog is 100%.

Group of orthologs #272. Best score 298 bits
Score difference with first non-orthologous sequence - L.chalumnae:298 P.knowlesi:298

H3AU01              	100.00%		B3LBC7              	100.00%
H3B5R1              	30.06%		
H3AQF9              	17.83%		
Bootstrap support for H3AU01 as seed ortholog is 100%.
Bootstrap support for B3LBC7 as seed ortholog is 100%.

Group of orthologs #273. Best score 297 bits
Score difference with first non-orthologous sequence - L.chalumnae:297 P.knowlesi:297

H3A6Q5              	100.00%		B3L212              	100.00%
H3BG06              	68.18%		
H3B5P0              	65.53%		
Bootstrap support for H3A6Q5 as seed ortholog is 100%.
Bootstrap support for B3L212 as seed ortholog is 100%.

Group of orthologs #274. Best score 297 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.knowlesi:124

H3AX47              	100.00%		B3LCV2              	100.00%
H3B3C5              	7.69%		
Bootstrap support for H3AX47 as seed ortholog is 97%.
Bootstrap support for B3LCV2 as seed ortholog is 100%.

Group of orthologs #275. Best score 297 bits
Score difference with first non-orthologous sequence - L.chalumnae:199 P.knowlesi:297

H3A2I6              	100.00%		B3L4B2              	100.00%
Bootstrap support for H3A2I6 as seed ortholog is 100%.
Bootstrap support for B3L4B2 as seed ortholog is 100%.

Group of orthologs #276. Best score 297 bits
Score difference with first non-orthologous sequence - L.chalumnae:297 P.knowlesi:297

H3AXM1              	100.00%		B3LCP1              	100.00%
Bootstrap support for H3AXM1 as seed ortholog is 100%.
Bootstrap support for B3LCP1 as seed ortholog is 100%.

Group of orthologs #277. Best score 296 bits
Score difference with first non-orthologous sequence - L.chalumnae:211 P.knowlesi:296

H3AIG9              	100.00%		B3L1W1              	100.00%
Bootstrap support for H3AIG9 as seed ortholog is 100%.
Bootstrap support for B3L1W1 as seed ortholog is 100%.

Group of orthologs #278. Best score 295 bits
Score difference with first non-orthologous sequence - L.chalumnae:295 P.knowlesi:295

H3A134              	100.00%		B3L0G0              	100.00%
Bootstrap support for H3A134 as seed ortholog is 100%.
Bootstrap support for B3L0G0 as seed ortholog is 100%.

Group of orthologs #279. Best score 295 bits
Score difference with first non-orthologous sequence - L.chalumnae:295 P.knowlesi:295

H2ZXG4              	100.00%		B3L7E4              	100.00%
Bootstrap support for H2ZXG4 as seed ortholog is 100%.
Bootstrap support for B3L7E4 as seed ortholog is 100%.

Group of orthologs #280. Best score 295 bits
Score difference with first non-orthologous sequence - L.chalumnae:295 P.knowlesi:295

H3AB87              	100.00%		B3L9A1              	100.00%
Bootstrap support for H3AB87 as seed ortholog is 100%.
Bootstrap support for B3L9A1 as seed ortholog is 100%.

Group of orthologs #281. Best score 295 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.knowlesi:135

H3B0Y7              	100.00%		B3LA76              	100.00%
Bootstrap support for H3B0Y7 as seed ortholog is 98%.
Bootstrap support for B3LA76 as seed ortholog is 99%.

Group of orthologs #282. Best score 294 bits
Score difference with first non-orthologous sequence - L.chalumnae:35 P.knowlesi:102

H3ANL1              	100.00%		B3L1W8              	100.00%
H3BES7              	73.97%		
H3BIB4              	68.49%		
H3BIB3              	41.10%		
H3B6E2              	10.96%		
Bootstrap support for H3ANL1 as seed ortholog is 97%.
Bootstrap support for B3L1W8 as seed ortholog is 100%.

Group of orthologs #283. Best score 294 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.knowlesi:294

H3A3B4              	100.00%		B3LAT1              	100.00%
Bootstrap support for H3A3B4 as seed ortholog is 88%.
Bootstrap support for B3LAT1 as seed ortholog is 100%.

Group of orthologs #284. Best score 294 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 P.knowlesi:294

H3B6C1              	100.00%		B3L6G1              	100.00%
Bootstrap support for H3B6C1 as seed ortholog is 99%.
Bootstrap support for B3L6G1 as seed ortholog is 100%.

Group of orthologs #285. Best score 294 bits
Score difference with first non-orthologous sequence - L.chalumnae:294 P.knowlesi:294

H3BHM8              	100.00%		B3L422              	100.00%
Bootstrap support for H3BHM8 as seed ortholog is 100%.
Bootstrap support for B3L422 as seed ortholog is 100%.

Group of orthologs #286. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.knowlesi:104

H2ZZ30              	100.00%		B3LBB4              	100.00%
H3A9R8              	22.58%		
H3BBT8              	20.22%		
H3A525              	8.82%		
Bootstrap support for H2ZZ30 as seed ortholog is 99%.
Bootstrap support for B3LBB4 as seed ortholog is 99%.

Group of orthologs #287. Best score 291 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.knowlesi:197

H3ACE2              	100.00%		B3L1B8              	100.00%
H2ZVW0              	49.47%		
H3A961              	39.47%		
H3BD34              	37.37%		
Bootstrap support for H3ACE2 as seed ortholog is 100%.
Bootstrap support for B3L1B8 as seed ortholog is 100%.

Group of orthologs #288. Best score 291 bits
Score difference with first non-orthologous sequence - L.chalumnae:176 P.knowlesi:291

H3BB08              	100.00%		B3L5C6              	100.00%
H3A5E0              	38.46%		
Bootstrap support for H3BB08 as seed ortholog is 99%.
Bootstrap support for B3L5C6 as seed ortholog is 100%.

Group of orthologs #289. Best score 291 bits
Score difference with first non-orthologous sequence - L.chalumnae:291 P.knowlesi:291

H3B343              	100.00%		B3LDA2              	100.00%
H3BHN0              	51.52%		
Bootstrap support for H3B343 as seed ortholog is 100%.
Bootstrap support for B3LDA2 as seed ortholog is 100%.

Group of orthologs #290. Best score 291 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.knowlesi:291

H3BD96              	100.00%		B3LAC9              	100.00%
H3B9J3              	24.20%		
Bootstrap support for H3BD96 as seed ortholog is 99%.
Bootstrap support for B3LAC9 as seed ortholog is 100%.

Group of orthologs #291. Best score 290 bits
Score difference with first non-orthologous sequence - L.chalumnae:290 P.knowlesi:290

H3BBL3              	100.00%		B3L9C8              	100.00%
Bootstrap support for H3BBL3 as seed ortholog is 100%.
Bootstrap support for B3L9C8 as seed ortholog is 100%.

Group of orthologs #292. Best score 289 bits
Score difference with first non-orthologous sequence - L.chalumnae:289 P.knowlesi:289

H3A450              	100.00%		B3L6H1              	100.00%
Bootstrap support for H3A450 as seed ortholog is 100%.
Bootstrap support for B3L6H1 as seed ortholog is 100%.

Group of orthologs #293. Best score 289 bits
Score difference with first non-orthologous sequence - L.chalumnae:289 P.knowlesi:289

H3API7              	100.00%		B3L7V3              	100.00%
Bootstrap support for H3API7 as seed ortholog is 100%.
Bootstrap support for B3L7V3 as seed ortholog is 100%.

Group of orthologs #294. Best score 289 bits
Score difference with first non-orthologous sequence - L.chalumnae:289 P.knowlesi:289

H3BFU7              	100.00%		B3LBU1              	100.00%
Bootstrap support for H3BFU7 as seed ortholog is 100%.
Bootstrap support for B3LBU1 as seed ortholog is 100%.

Group of orthologs #295. Best score 289 bits
Score difference with first non-orthologous sequence - L.chalumnae:289 P.knowlesi:289

H3BGE5              	100.00%		B3LBL4              	100.00%
Bootstrap support for H3BGE5 as seed ortholog is 100%.
Bootstrap support for B3LBL4 as seed ortholog is 100%.

Group of orthologs #296. Best score 288 bits
Score difference with first non-orthologous sequence - L.chalumnae:288 P.knowlesi:288

H3ARJ1              	100.00%		B3LAE0              	100.00%
H3AA47              	35.78%		
H2ZRJ2              	11.18%		
Bootstrap support for H3ARJ1 as seed ortholog is 100%.
Bootstrap support for B3LAE0 as seed ortholog is 100%.

Group of orthologs #297. Best score 287 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 P.knowlesi:287

H3AFE7              	100.00%		B3L8A8              	100.00%
H3A1E0              	42.32%		
Bootstrap support for H3AFE7 as seed ortholog is 100%.
Bootstrap support for B3L8A8 as seed ortholog is 100%.

Group of orthologs #298. Best score 287 bits
Score difference with first non-orthologous sequence - L.chalumnae:287 P.knowlesi:287

H3AKV5              	100.00%		B3L1G8              	100.00%
Bootstrap support for H3AKV5 as seed ortholog is 100%.
Bootstrap support for B3L1G8 as seed ortholog is 100%.

Group of orthologs #299. Best score 287 bits
Score difference with first non-orthologous sequence - L.chalumnae:287 P.knowlesi:287

H3ANS2              	100.00%		B3L0A6              	100.00%
Bootstrap support for H3ANS2 as seed ortholog is 100%.
Bootstrap support for B3L0A6 as seed ortholog is 100%.

Group of orthologs #300. Best score 287 bits
Score difference with first non-orthologous sequence - L.chalumnae:287 P.knowlesi:287

H3AP00              	100.00%		B3L3W7              	100.00%
Bootstrap support for H3AP00 as seed ortholog is 100%.
Bootstrap support for B3L3W7 as seed ortholog is 100%.

Group of orthologs #301. Best score 285 bits
Score difference with first non-orthologous sequence - L.chalumnae:285 P.knowlesi:285

H3A4P7              	100.00%		B3KZJ7              	100.00%
Bootstrap support for H3A4P7 as seed ortholog is 100%.
Bootstrap support for B3KZJ7 as seed ortholog is 100%.

Group of orthologs #302. Best score 284 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.knowlesi:129

H3A5L2              	100.00%		B3L8Y4              	100.00%
H2ZXJ6              	54.50%		
Bootstrap support for H3A5L2 as seed ortholog is 99%.
Bootstrap support for B3L8Y4 as seed ortholog is 99%.

Group of orthologs #303. Best score 284 bits
Score difference with first non-orthologous sequence - L.chalumnae:284 P.knowlesi:284

H3AJ55              	100.00%		B3L9M5              	100.00%
H3AYY8              	22.90%		
Bootstrap support for H3AJ55 as seed ortholog is 100%.
Bootstrap support for B3L9M5 as seed ortholog is 100%.

Group of orthologs #304. Best score 284 bits
Score difference with first non-orthologous sequence - L.chalumnae:284 P.knowlesi:284

H3A0A5              	100.00%		B3L0S1              	100.00%
Bootstrap support for H3A0A5 as seed ortholog is 100%.
Bootstrap support for B3L0S1 as seed ortholog is 100%.

Group of orthologs #305. Best score 283 bits
Score difference with first non-orthologous sequence - L.chalumnae:283 P.knowlesi:283

H3AEM3              	100.00%		B3L2C8              	100.00%
Bootstrap support for H3AEM3 as seed ortholog is 100%.
Bootstrap support for B3L2C8 as seed ortholog is 100%.

Group of orthologs #306. Best score 282 bits
Score difference with first non-orthologous sequence - L.chalumnae:282 P.knowlesi:282

H2ZVF2              	100.00%		B3LB36              	100.00%
Bootstrap support for H2ZVF2 as seed ortholog is 100%.
Bootstrap support for B3LB36 as seed ortholog is 100%.

Group of orthologs #307. Best score 281 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.knowlesi:155

H3B7M8              	100.00%		B3L342              	100.00%
H3AK24              	61.31%		
Bootstrap support for H3B7M8 as seed ortholog is 99%.
Bootstrap support for B3L342 as seed ortholog is 100%.

Group of orthologs #308. Best score 281 bits
Score difference with first non-orthologous sequence - L.chalumnae:281 P.knowlesi:281

H3AFT5              	100.00%		B3L3R6              	100.00%
Bootstrap support for H3AFT5 as seed ortholog is 100%.
Bootstrap support for B3L3R6 as seed ortholog is 100%.

Group of orthologs #309. Best score 280 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.knowlesi:280

H2ZWI0              	100.00%		B3L014              	100.00%
Bootstrap support for H2ZWI0 as seed ortholog is 99%.
Bootstrap support for B3L014 as seed ortholog is 100%.

Group of orthologs #310. Best score 280 bits
Score difference with first non-orthologous sequence - L.chalumnae:280 P.knowlesi:280

H3ASB1              	100.00%		B3L712              	100.00%
Bootstrap support for H3ASB1 as seed ortholog is 100%.
Bootstrap support for B3L712 as seed ortholog is 100%.

Group of orthologs #311. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:277 P.knowlesi:277

H3A0R1              	100.00%		B3L9B3              	100.00%
H2ZS79              	71.89%		
Bootstrap support for H3A0R1 as seed ortholog is 100%.
Bootstrap support for B3L9B3 as seed ortholog is 100%.

Group of orthologs #312. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:277 P.knowlesi:277

H3AB41              	100.00%		B3L0Z7              	100.00%
Bootstrap support for H3AB41 as seed ortholog is 100%.
Bootstrap support for B3L0Z7 as seed ortholog is 100%.

Group of orthologs #313. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:277 P.knowlesi:277

H3ABZ1              	100.00%		B3L6T1              	100.00%
Bootstrap support for H3ABZ1 as seed ortholog is 100%.
Bootstrap support for B3L6T1 as seed ortholog is 100%.

Group of orthologs #314. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:14 P.knowlesi:129

H3AGZ3              	100.00%		B3LDF3              	100.00%
Bootstrap support for H3AGZ3 as seed ortholog is 76%.
Bootstrap support for B3LDF3 as seed ortholog is 99%.

Group of orthologs #315. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:277 P.knowlesi:277

H3B063              	100.00%		B3L7X1              	100.00%
Bootstrap support for H3B063 as seed ortholog is 100%.
Bootstrap support for B3L7X1 as seed ortholog is 100%.

Group of orthologs #316. Best score 276 bits
Score difference with first non-orthologous sequence - L.chalumnae:276 P.knowlesi:276

H3BFG9              	100.00%		B3L7F1              	100.00%
H3AMH0              	36.89%		
Bootstrap support for H3BFG9 as seed ortholog is 100%.
Bootstrap support for B3L7F1 as seed ortholog is 100%.

Group of orthologs #317. Best score 276 bits
Score difference with first non-orthologous sequence - L.chalumnae:152 P.knowlesi:276

H3B2R7              	100.00%		B3L9T7              	100.00%
Bootstrap support for H3B2R7 as seed ortholog is 99%.
Bootstrap support for B3L9T7 as seed ortholog is 100%.

Group of orthologs #318. Best score 275 bits
Score difference with first non-orthologous sequence - L.chalumnae:179 P.knowlesi:275

H3ACQ7              	100.00%		B3L6C5              	100.00%
Bootstrap support for H3ACQ7 as seed ortholog is 99%.
Bootstrap support for B3L6C5 as seed ortholog is 100%.

Group of orthologs #319. Best score 274 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.knowlesi:92

H3AW20              	100.00%		B3LC19              	100.00%
H3BB91              	44.30%		
H3ATF1              	42.41%		
H3BBM7              	32.28%		
H3ASP3              	11.39%		
Bootstrap support for H3AW20 as seed ortholog is 99%.
Bootstrap support for B3LC19 as seed ortholog is 99%.

Group of orthologs #320. Best score 274 bits
Score difference with first non-orthologous sequence - L.chalumnae:274 P.knowlesi:274

H2ZSE7              	100.00%		B3L5K0              	100.00%
Bootstrap support for H2ZSE7 as seed ortholog is 100%.
Bootstrap support for B3L5K0 as seed ortholog is 100%.

Group of orthologs #321. Best score 274 bits
Score difference with first non-orthologous sequence - L.chalumnae:274 P.knowlesi:274

M3XJU4              	100.00%		B3L8Q7              	100.00%
Bootstrap support for M3XJU4 as seed ortholog is 100%.
Bootstrap support for B3L8Q7 as seed ortholog is 100%.

Group of orthologs #322. Best score 273 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.knowlesi:151

M3XI55              	100.00%		B3LBF2              	100.00%
H3A7Z6              	25.00%		
Bootstrap support for M3XI55 as seed ortholog is 100%.
Bootstrap support for B3LBF2 as seed ortholog is 100%.

Group of orthologs #323. Best score 272 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 P.knowlesi:272

H3AE65              	100.00%		B3LB10              	100.00%
H3B461              	51.95%		
Bootstrap support for H3AE65 as seed ortholog is 100%.
Bootstrap support for B3LB10 as seed ortholog is 100%.

Group of orthologs #324. Best score 272 bits
Score difference with first non-orthologous sequence - L.chalumnae:272 P.knowlesi:272

H3ARM7              	100.00%		B3L8I7              	100.00%
H3ASB6              	43.36%		
Bootstrap support for H3ARM7 as seed ortholog is 100%.
Bootstrap support for B3L8I7 as seed ortholog is 100%.

Group of orthologs #325. Best score 272 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 P.knowlesi:272

H3AT29              	100.00%		B3LCJ0              	100.00%
Bootstrap support for H3AT29 as seed ortholog is 100%.
Bootstrap support for B3LCJ0 as seed ortholog is 100%.

Group of orthologs #326. Best score 272 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.knowlesi:176

H3BI08              	100.00%		B3LC21              	100.00%
Bootstrap support for H3BI08 as seed ortholog is 99%.
Bootstrap support for B3LC21 as seed ortholog is 100%.

Group of orthologs #327. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:195 P.knowlesi:173

H3AY68              	100.00%		B3L9W3              	100.00%
H3B476              	46.79%		
H2ZZJ0              	20.77%		
Bootstrap support for H3AY68 as seed ortholog is 100%.
Bootstrap support for B3L9W3 as seed ortholog is 99%.

Group of orthologs #328. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:270 P.knowlesi:270

H2ZVZ4              	100.00%		B3L2Z8              	100.00%
Bootstrap support for H2ZVZ4 as seed ortholog is 100%.
Bootstrap support for B3L2Z8 as seed ortholog is 100%.

Group of orthologs #329. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:270 P.knowlesi:270

H3A0F5              	100.00%		B3LCP7              	100.00%
Bootstrap support for H3A0F5 as seed ortholog is 100%.
Bootstrap support for B3LCP7 as seed ortholog is 100%.

Group of orthologs #330. Best score 268 bits
Score difference with first non-orthologous sequence - L.chalumnae:268 P.knowlesi:268

H3ARW1              	100.00%		B3LD82              	100.00%
H3B1S4              	62.84%		
Bootstrap support for H3ARW1 as seed ortholog is 100%.
Bootstrap support for B3LD82 as seed ortholog is 100%.

Group of orthologs #331. Best score 268 bits
Score difference with first non-orthologous sequence - L.chalumnae:268 P.knowlesi:268

H3ALE4              	100.00%		B3KZR6              	100.00%
Bootstrap support for H3ALE4 as seed ortholog is 100%.
Bootstrap support for B3KZR6 as seed ortholog is 100%.

Group of orthologs #332. Best score 267 bits
Score difference with first non-orthologous sequence - L.chalumnae:267 P.knowlesi:267

H2ZSD4              	100.00%		B3L1M7              	100.00%
Bootstrap support for H2ZSD4 as seed ortholog is 100%.
Bootstrap support for B3L1M7 as seed ortholog is 100%.

Group of orthologs #333. Best score 267 bits
Score difference with first non-orthologous sequence - L.chalumnae:204 P.knowlesi:214

H3ARL5              	100.00%		B3L3E0              	100.00%
Bootstrap support for H3ARL5 as seed ortholog is 100%.
Bootstrap support for B3L3E0 as seed ortholog is 100%.

Group of orthologs #334. Best score 267 bits
Score difference with first non-orthologous sequence - L.chalumnae:267 P.knowlesi:267

H3B2C3              	100.00%		B3L7E0              	100.00%
Bootstrap support for H3B2C3 as seed ortholog is 100%.
Bootstrap support for B3L7E0 as seed ortholog is 100%.

Group of orthologs #335. Best score 267 bits
Score difference with first non-orthologous sequence - L.chalumnae:267 P.knowlesi:267

H3BHY8              	100.00%		B3L9D4              	100.00%
Bootstrap support for H3BHY8 as seed ortholog is 100%.
Bootstrap support for B3L9D4 as seed ortholog is 100%.

Group of orthologs #336. Best score 265 bits
Score difference with first non-orthologous sequence - L.chalumnae:265 P.knowlesi:265

H2ZXM1              	100.00%		B3L1H7              	100.00%
Bootstrap support for H2ZXM1 as seed ortholog is 100%.
Bootstrap support for B3L1H7 as seed ortholog is 100%.

Group of orthologs #337. Best score 265 bits
Score difference with first non-orthologous sequence - L.chalumnae:265 P.knowlesi:265

H3ABL2              	100.00%		B3L3M9              	100.00%
Bootstrap support for H3ABL2 as seed ortholog is 100%.
Bootstrap support for B3L3M9 as seed ortholog is 100%.

Group of orthologs #338. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 P.knowlesi:264

H3AGE6              	100.00%		B3L2B7              	100.00%
Bootstrap support for H3AGE6 as seed ortholog is 99%.
Bootstrap support for B3L2B7 as seed ortholog is 100%.

Group of orthologs #339. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:221 P.knowlesi:214

H3B881              	100.00%		B3KZR0              	100.00%
Bootstrap support for H3B881 as seed ortholog is 100%.
Bootstrap support for B3KZR0 as seed ortholog is 100%.

Group of orthologs #340. Best score 263 bits
Score difference with first non-orthologous sequence - L.chalumnae:40 P.knowlesi:45

H3AXT0              	100.00%		B3L6D9              	100.00%
H3AYA0              	80.14%		
Bootstrap support for H3AXT0 as seed ortholog is 93%.
Bootstrap support for B3L6D9 as seed ortholog is 98%.

Group of orthologs #341. Best score 263 bits
Score difference with first non-orthologous sequence - L.chalumnae:263 P.knowlesi:263

H3A4C1              	100.00%		B3LBQ9              	100.00%
Bootstrap support for H3A4C1 as seed ortholog is 100%.
Bootstrap support for B3LBQ9 as seed ortholog is 100%.

Group of orthologs #342. Best score 263 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 P.knowlesi:263

H3AP13              	100.00%		B3L5M0              	100.00%
Bootstrap support for H3AP13 as seed ortholog is 100%.
Bootstrap support for B3L5M0 as seed ortholog is 100%.

Group of orthologs #343. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:262 P.knowlesi:262

H3BGW8              	100.00%		B3L640              	100.00%
Bootstrap support for H3BGW8 as seed ortholog is 100%.
Bootstrap support for B3L640 as seed ortholog is 100%.

Group of orthologs #344. Best score 261 bits
Score difference with first non-orthologous sequence - L.chalumnae:261 P.knowlesi:261

H3AV80              	100.00%		B3L3U0              	100.00%
H2ZSN5              	61.98%		
Bootstrap support for H3AV80 as seed ortholog is 100%.
Bootstrap support for B3L3U0 as seed ortholog is 100%.

Group of orthologs #345. Best score 261 bits
Score difference with first non-orthologous sequence - L.chalumnae:261 P.knowlesi:261

H3A155              	100.00%		B3L230              	100.00%
Bootstrap support for H3A155 as seed ortholog is 100%.
Bootstrap support for B3L230 as seed ortholog is 100%.

Group of orthologs #346. Best score 261 bits
Score difference with first non-orthologous sequence - L.chalumnae:261 P.knowlesi:261

H3A915              	100.00%		B3LAL7              	100.00%
Bootstrap support for H3A915 as seed ortholog is 100%.
Bootstrap support for B3LAL7 as seed ortholog is 100%.

Group of orthologs #347. Best score 259 bits
Score difference with first non-orthologous sequence - L.chalumnae:259 P.knowlesi:259

H3BIR3              	100.00%		B3KZ18              	100.00%
Bootstrap support for H3BIR3 as seed ortholog is 100%.
Bootstrap support for B3KZ18 as seed ortholog is 100%.

Group of orthologs #348. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:257 P.knowlesi:257

H3AFW6              	100.00%		B3L3C0              	100.00%
H3B108              	6.20%		
Bootstrap support for H3AFW6 as seed ortholog is 100%.
Bootstrap support for B3L3C0 as seed ortholog is 100%.

Group of orthologs #349. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:184 P.knowlesi:154

H3B1F4              	100.00%		B3L8V3              	100.00%
H3BHG4              	43.38%		
Bootstrap support for H3B1F4 as seed ortholog is 100%.
Bootstrap support for B3L8V3 as seed ortholog is 100%.

Group of orthologs #350. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:257 P.knowlesi:257

H3AQC5              	100.00%		B3L8H9              	100.00%
Bootstrap support for H3AQC5 as seed ortholog is 100%.
Bootstrap support for B3L8H9 as seed ortholog is 100%.

Group of orthologs #351. Best score 256 bits
Score difference with first non-orthologous sequence - L.chalumnae:256 P.knowlesi:256

M3XIT3              	100.00%		B3LCT1              	100.00%
H2ZW74              	34.56%		
H3AES0              	21.56%		
M3XJ68              	16.63%		
H3B762              	16.52%		
H3B2S8              	16.13%		
H2ZXU9              	14.29%		
H3AIJ4              	14.15%		
H3B9L4              	13.57%		
H2ZZE6              	12.42%		
H3A114              	9.83%		
Bootstrap support for M3XIT3 as seed ortholog is 100%.
Bootstrap support for B3LCT1 as seed ortholog is 100%.

Group of orthologs #352. Best score 256 bits
Score difference with first non-orthologous sequence - L.chalumnae:256 P.knowlesi:256

H3A5T5              	100.00%		B3KZD2              	100.00%
Bootstrap support for H3A5T5 as seed ortholog is 100%.
Bootstrap support for B3KZD2 as seed ortholog is 100%.

Group of orthologs #353. Best score 256 bits
Score difference with first non-orthologous sequence - L.chalumnae:256 P.knowlesi:256

H3ADM5              	100.00%		B3LCR8              	100.00%
Bootstrap support for H3ADM5 as seed ortholog is 100%.
Bootstrap support for B3LCR8 as seed ortholog is 100%.

Group of orthologs #354. Best score 256 bits
Score difference with first non-orthologous sequence - L.chalumnae:256 P.knowlesi:256

H3B705              	100.00%		B3L2T6              	100.00%
Bootstrap support for H3B705 as seed ortholog is 100%.
Bootstrap support for B3L2T6 as seed ortholog is 100%.

Group of orthologs #355. Best score 256 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 P.knowlesi:256

H3BCW2              	100.00%		B3L094              	100.00%
Bootstrap support for H3BCW2 as seed ortholog is 99%.
Bootstrap support for B3L094 as seed ortholog is 100%.

Group of orthologs #356. Best score 255 bits
Score difference with first non-orthologous sequence - L.chalumnae:255 P.knowlesi:255

H3BHA1              	100.00%		B3LA31              	100.00%
Bootstrap support for H3BHA1 as seed ortholog is 100%.
Bootstrap support for B3LA31 as seed ortholog is 100%.

Group of orthologs #357. Best score 254 bits
Score difference with first non-orthologous sequence - L.chalumnae:254 P.knowlesi:254

H2ZYJ0              	100.00%		B3L9P8              	100.00%
Bootstrap support for H2ZYJ0 as seed ortholog is 100%.
Bootstrap support for B3L9P8 as seed ortholog is 100%.

Group of orthologs #358. Best score 253 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.knowlesi:73

H3AI90              	100.00%		B3KZG3              	100.00%
H3A406              	68.61%		
H3BGB6              	58.17%		
Bootstrap support for H3AI90 as seed ortholog is 97%.
Bootstrap support for B3KZG3 as seed ortholog is 62%.
Alternative seed ortholog is B3L436 (73 bits away from this cluster)

Group of orthologs #359. Best score 253 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 P.knowlesi:198

H3A5R8              	100.00%		B3LAH8              	100.00%
Bootstrap support for H3A5R8 as seed ortholog is 100%.
Bootstrap support for B3LAH8 as seed ortholog is 99%.

Group of orthologs #360. Best score 253 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.knowlesi:253

H3B7D5              	100.00%		B3L6U8              	100.00%
Bootstrap support for H3B7D5 as seed ortholog is 83%.
Bootstrap support for B3L6U8 as seed ortholog is 100%.

Group of orthologs #361. Best score 252 bits
Score difference with first non-orthologous sequence - L.chalumnae:252 P.knowlesi:48

H2ZYK7              	100.00%		B3L3U6              	100.00%
Bootstrap support for H2ZYK7 as seed ortholog is 100%.
Bootstrap support for B3L3U6 as seed ortholog is 93%.

Group of orthologs #362. Best score 252 bits
Score difference with first non-orthologous sequence - L.chalumnae:252 P.knowlesi:252

H3A8S5              	100.00%		B3L7B6              	100.00%
Bootstrap support for H3A8S5 as seed ortholog is 100%.
Bootstrap support for B3L7B6 as seed ortholog is 100%.

Group of orthologs #363. Best score 251 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.knowlesi:74

H2ZW01              	100.00%		B3KZK4              	100.00%
Bootstrap support for H2ZW01 as seed ortholog is 100%.
Bootstrap support for B3KZK4 as seed ortholog is 99%.

Group of orthologs #364. Best score 251 bits
Score difference with first non-orthologous sequence - L.chalumnae:251 P.knowlesi:251

H3ALU3              	100.00%		B3L0B5              	100.00%
Bootstrap support for H3ALU3 as seed ortholog is 100%.
Bootstrap support for B3L0B5 as seed ortholog is 100%.

Group of orthologs #365. Best score 251 bits
Score difference with first non-orthologous sequence - L.chalumnae:251 P.knowlesi:251

H3AQL2              	100.00%		B3L086              	100.00%
Bootstrap support for H3AQL2 as seed ortholog is 100%.
Bootstrap support for B3L086 as seed ortholog is 100%.

Group of orthologs #366. Best score 251 bits
Score difference with first non-orthologous sequence - L.chalumnae:251 P.knowlesi:251

H3BEI1              	100.00%		B3L0H3              	100.00%
Bootstrap support for H3BEI1 as seed ortholog is 100%.
Bootstrap support for B3L0H3 as seed ortholog is 100%.

Group of orthologs #367. Best score 250 bits
Score difference with first non-orthologous sequence - L.chalumnae:4 P.knowlesi:250

H3A120              	100.00%		B3L1K2              	100.00%
H3BBE6              	29.66%		
Bootstrap support for H3A120 as seed ortholog is 79%.
Bootstrap support for B3L1K2 as seed ortholog is 100%.

Group of orthologs #368. Best score 250 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 P.knowlesi:170

H3AKH6              	100.00%		B3L120              	100.00%
Bootstrap support for H3AKH6 as seed ortholog is 100%.
Bootstrap support for B3L120 as seed ortholog is 99%.

Group of orthologs #369. Best score 250 bits
Score difference with first non-orthologous sequence - L.chalumnae:250 P.knowlesi:57

H3AF57              	100.00%		B3L8B6              	100.00%
Bootstrap support for H3AF57 as seed ortholog is 100%.
Bootstrap support for B3L8B6 as seed ortholog is 94%.

Group of orthologs #370. Best score 250 bits
Score difference with first non-orthologous sequence - L.chalumnae:250 P.knowlesi:250

H3B133              	100.00%		B3LAV2              	100.00%
Bootstrap support for H3B133 as seed ortholog is 100%.
Bootstrap support for B3LAV2 as seed ortholog is 100%.

Group of orthologs #371. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 P.knowlesi:179

H3AD09              	100.00%		B3LBY0              	100.00%
H3BIN8              	55.17%		
Bootstrap support for H3AD09 as seed ortholog is 100%.
Bootstrap support for B3LBY0 as seed ortholog is 99%.

Group of orthologs #372. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 P.knowlesi:248

H3AU52              	100.00%		B3L786              	100.00%
H3A6D9              	36.10%		
Bootstrap support for H3AU52 as seed ortholog is 100%.
Bootstrap support for B3L786 as seed ortholog is 100%.

Group of orthologs #373. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 P.knowlesi:248

H3AWH0              	100.00%		B3LAY2              	100.00%
H3AIU2              	57.65%		
Bootstrap support for H3AWH0 as seed ortholog is 100%.
Bootstrap support for B3LAY2 as seed ortholog is 100%.

Group of orthologs #374. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 P.knowlesi:248

M3XI17              	100.00%		B3L7E2              	100.00%
Bootstrap support for M3XI17 as seed ortholog is 100%.
Bootstrap support for B3L7E2 as seed ortholog is 100%.

Group of orthologs #375. Best score 247 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.knowlesi:104

H3AYG8              	100.00%		B3L0M2              	100.00%
H2ZWJ1              	53.98%		B3LA59              	43.94%
H2ZW35              	49.46%		B3KZU8              	15.20%
H2ZXL5              	6.45%		
Bootstrap support for H3AYG8 as seed ortholog is 99%.
Bootstrap support for B3L0M2 as seed ortholog is 99%.

Group of orthologs #376. Best score 247 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.knowlesi:124

H3A7H1              	100.00%		B3LB25              	100.00%
Bootstrap support for H3A7H1 as seed ortholog is 99%.
Bootstrap support for B3LB25 as seed ortholog is 100%.

Group of orthologs #377. Best score 247 bits
Score difference with first non-orthologous sequence - L.chalumnae:247 P.knowlesi:247

H3ADY5              	100.00%		B3LD25              	100.00%
Bootstrap support for H3ADY5 as seed ortholog is 100%.
Bootstrap support for B3LD25 as seed ortholog is 100%.

Group of orthologs #378. Best score 247 bits
Score difference with first non-orthologous sequence - L.chalumnae:247 P.knowlesi:247

H3BC39              	100.00%		B3L4N0              	100.00%
Bootstrap support for H3BC39 as seed ortholog is 100%.
Bootstrap support for B3L4N0 as seed ortholog is 100%.

Group of orthologs #379. Best score 246 bits
Score difference with first non-orthologous sequence - L.chalumnae:246 P.knowlesi:246

H3AQY0              	100.00%		B3L4A5              	100.00%
Bootstrap support for H3AQY0 as seed ortholog is 100%.
Bootstrap support for B3L4A5 as seed ortholog is 100%.

Group of orthologs #380. Best score 245 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.knowlesi:115

H3A4Q6              	100.00%		B3L7V1              	100.00%
H3B1Y8              	65.00%		B3L7M9              	26.32%
Bootstrap support for H3A4Q6 as seed ortholog is 100%.
Bootstrap support for B3L7V1 as seed ortholog is 100%.

Group of orthologs #381. Best score 245 bits
Score difference with first non-orthologous sequence - L.chalumnae:245 P.knowlesi:245

H2ZU07              	100.00%		B3L787              	100.00%
Bootstrap support for H2ZU07 as seed ortholog is 100%.
Bootstrap support for B3L787 as seed ortholog is 100%.

Group of orthologs #382. Best score 244 bits
Score difference with first non-orthologous sequence - L.chalumnae:244 P.knowlesi:56

H3AJ22              	100.00%		B3L9T8              	100.00%
H3A5A8              	14.90%		
Bootstrap support for H3AJ22 as seed ortholog is 100%.
Bootstrap support for B3L9T8 as seed ortholog is 86%.

Group of orthologs #383. Best score 243 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.knowlesi:134

H3ACS8              	100.00%		B3L111              	100.00%
H3A399              	35.40%		
H3ACC4              	23.14%		
Bootstrap support for H3ACS8 as seed ortholog is 97%.
Bootstrap support for B3L111 as seed ortholog is 99%.

Group of orthologs #384. Best score 243 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.knowlesi:243

H3AB34              	100.00%		B3KZC4              	100.00%
Bootstrap support for H3AB34 as seed ortholog is 99%.
Bootstrap support for B3KZC4 as seed ortholog is 100%.

Group of orthologs #385. Best score 243 bits
Score difference with first non-orthologous sequence - L.chalumnae:243 P.knowlesi:243

H3A171              	100.00%		B3L8C3              	100.00%
Bootstrap support for H3A171 as seed ortholog is 100%.
Bootstrap support for B3L8C3 as seed ortholog is 100%.

Group of orthologs #386. Best score 241 bits
Score difference with first non-orthologous sequence - L.chalumnae:241 P.knowlesi:241

H3B651              	100.00%		B3L3S5              	100.00%
H3B2C6              	55.49%		
H3A2R8              	38.53%		
H3BDF5              	38.46%		
H3ACD1              	20.67%		
H3ADV3              	19.08%		
H3BBC6              	17.87%		
H3BIB1              	13.40%		
H2ZU77              	9.46%		
H3APZ2              	8.78%		
H2ZUJ3              	7.65%		
H3AZ25              	6.74%		
Bootstrap support for H3B651 as seed ortholog is 100%.
Bootstrap support for B3L3S5 as seed ortholog is 100%.

Group of orthologs #387. Best score 241 bits
Score difference with first non-orthologous sequence - L.chalumnae:241 P.knowlesi:241

H2ZUH4              	100.00%		B3L752              	100.00%
Bootstrap support for H2ZUH4 as seed ortholog is 100%.
Bootstrap support for B3L752 as seed ortholog is 100%.

Group of orthologs #388. Best score 241 bits
Score difference with first non-orthologous sequence - L.chalumnae:241 P.knowlesi:241

H3AJU8              	100.00%		B3L7K8              	100.00%
Bootstrap support for H3AJU8 as seed ortholog is 100%.
Bootstrap support for B3L7K8 as seed ortholog is 100%.

Group of orthologs #389. Best score 241 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.knowlesi:69

H3AT34              	100.00%		B3L2J5              	100.00%
Bootstrap support for H3AT34 as seed ortholog is 93%.
Bootstrap support for B3L2J5 as seed ortholog is 97%.

Group of orthologs #390. Best score 239 bits
Score difference with first non-orthologous sequence - L.chalumnae:239 P.knowlesi:239

H3AZJ0              	100.00%		B3L0G6              	100.00%
Bootstrap support for H3AZJ0 as seed ortholog is 100%.
Bootstrap support for B3L0G6 as seed ortholog is 100%.

Group of orthologs #391. Best score 238 bits
Score difference with first non-orthologous sequence - L.chalumnae:238 P.knowlesi:238

H2ZZN1              	100.00%		B3L542              	100.00%
Bootstrap support for H2ZZN1 as seed ortholog is 100%.
Bootstrap support for B3L542 as seed ortholog is 100%.

Group of orthologs #392. Best score 238 bits
Score difference with first non-orthologous sequence - L.chalumnae:238 P.knowlesi:238

H3B4G2              	100.00%		B3KZA8              	100.00%
Bootstrap support for H3B4G2 as seed ortholog is 100%.
Bootstrap support for B3KZA8 as seed ortholog is 100%.

Group of orthologs #393. Best score 238 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.knowlesi:155

H3BHL9              	100.00%		B3L4Y0              	100.00%
Bootstrap support for H3BHL9 as seed ortholog is 100%.
Bootstrap support for B3L4Y0 as seed ortholog is 100%.

Group of orthologs #394. Best score 237 bits
Score difference with first non-orthologous sequence - L.chalumnae:237 P.knowlesi:237

H3A6D1              	100.00%		B3L1T3              	100.00%
H3ASN3              	40.89%		
Bootstrap support for H3A6D1 as seed ortholog is 100%.
Bootstrap support for B3L1T3 as seed ortholog is 100%.

Group of orthologs #395. Best score 237 bits
Score difference with first non-orthologous sequence - L.chalumnae:237 P.knowlesi:237

H3B421              	100.00%		B3L739              	100.00%
Bootstrap support for H3B421 as seed ortholog is 100%.
Bootstrap support for B3L739 as seed ortholog is 100%.

Group of orthologs #396. Best score 237 bits
Score difference with first non-orthologous sequence - L.chalumnae:237 P.knowlesi:93

H3B6A3              	100.00%		B3L6W6              	100.00%
Bootstrap support for H3B6A3 as seed ortholog is 100%.
Bootstrap support for B3L6W6 as seed ortholog is 99%.

Group of orthologs #397. Best score 237 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.knowlesi:237

H3B8Y2              	100.00%		B3L6A6              	100.00%
Bootstrap support for H3B8Y2 as seed ortholog is 99%.
Bootstrap support for B3L6A6 as seed ortholog is 100%.

Group of orthologs #398. Best score 237 bits
Score difference with first non-orthologous sequence - L.chalumnae:237 P.knowlesi:237

H3BEZ8              	100.00%		B3L3Y9              	100.00%
Bootstrap support for H3BEZ8 as seed ortholog is 100%.
Bootstrap support for B3L3Y9 as seed ortholog is 100%.

Group of orthologs #399. Best score 236 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.knowlesi:174

H3B5T0              	100.00%		B3L3Q4              	100.00%
H3A4V8              	75.86%		
H3B232              	30.34%		
H3B5M2              	11.38%		
H3B5P3              	5.86%		
Bootstrap support for H3B5T0 as seed ortholog is 100%.
Bootstrap support for B3L3Q4 as seed ortholog is 100%.

Group of orthologs #400. Best score 236 bits
Score difference with first non-orthologous sequence - L.chalumnae:236 P.knowlesi:236

H3AI49              	100.00%		B3LB97              	100.00%
Bootstrap support for H3AI49 as seed ortholog is 100%.
Bootstrap support for B3LB97 as seed ortholog is 100%.

Group of orthologs #401. Best score 236 bits
Score difference with first non-orthologous sequence - L.chalumnae:236 P.knowlesi:139

H3AQB8              	100.00%		B3L5I1              	100.00%
Bootstrap support for H3AQB8 as seed ortholog is 100%.
Bootstrap support for B3L5I1 as seed ortholog is 99%.

Group of orthologs #402. Best score 236 bits
Score difference with first non-orthologous sequence - L.chalumnae:236 P.knowlesi:236

H3ATS7              	100.00%		B3L5D4              	100.00%
Bootstrap support for H3ATS7 as seed ortholog is 100%.
Bootstrap support for B3L5D4 as seed ortholog is 100%.

Group of orthologs #403. Best score 236 bits
Score difference with first non-orthologous sequence - L.chalumnae:236 P.knowlesi:236

H3BFQ5              	100.00%		B3L0V2              	100.00%
Bootstrap support for H3BFQ5 as seed ortholog is 100%.
Bootstrap support for B3L0V2 as seed ortholog is 100%.

Group of orthologs #404. Best score 235 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 P.knowlesi:235

H3A8L0              	100.00%		B3L4Y9              	100.00%
H3APV3              	10.48%		
Bootstrap support for H3A8L0 as seed ortholog is 100%.
Bootstrap support for B3L4Y9 as seed ortholog is 100%.

Group of orthologs #405. Best score 235 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 P.knowlesi:235

H2ZSG1              	100.00%		B3LCV0              	100.00%
Bootstrap support for H2ZSG1 as seed ortholog is 100%.
Bootstrap support for B3LCV0 as seed ortholog is 100%.

Group of orthologs #406. Best score 235 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 P.knowlesi:235

H3BDP3              	100.00%		B3L8F7              	100.00%
Bootstrap support for H3BDP3 as seed ortholog is 100%.
Bootstrap support for B3L8F7 as seed ortholog is 100%.

Group of orthologs #407. Best score 234 bits
Score difference with first non-orthologous sequence - L.chalumnae:234 P.knowlesi:234

H3ALJ5              	100.00%		B3L984              	100.00%
Bootstrap support for H3ALJ5 as seed ortholog is 100%.
Bootstrap support for B3L984 as seed ortholog is 100%.

Group of orthologs #408. Best score 234 bits
Score difference with first non-orthologous sequence - L.chalumnae:234 P.knowlesi:234

H3B831              	100.00%		B3L9S4              	100.00%
Bootstrap support for H3B831 as seed ortholog is 100%.
Bootstrap support for B3L9S4 as seed ortholog is 100%.

Group of orthologs #409. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:232 P.knowlesi:232

H3B6W0              	100.00%		B3L0B9              	100.00%
Bootstrap support for H3B6W0 as seed ortholog is 100%.
Bootstrap support for B3L0B9 as seed ortholog is 100%.

Group of orthologs #410. Best score 231 bits
Score difference with first non-orthologous sequence - L.chalumnae:231 P.knowlesi:231

H3AXN8              	100.00%		B3LCB0              	100.00%
H3AXA8              	43.42%		
H3AVW4              	34.34%		
Bootstrap support for H3AXN8 as seed ortholog is 100%.
Bootstrap support for B3LCB0 as seed ortholog is 100%.

Group of orthologs #411. Best score 231 bits
Score difference with first non-orthologous sequence - L.chalumnae:231 P.knowlesi:69

H3ARN2              	100.00%		B3LAE6              	100.00%
H2ZZJ1              	34.07%		
Bootstrap support for H3ARN2 as seed ortholog is 100%.
Bootstrap support for B3LAE6 as seed ortholog is 90%.

Group of orthologs #412. Best score 231 bits
Score difference with first non-orthologous sequence - L.chalumnae:231 P.knowlesi:231

H3B751              	100.00%		B3L4C7              	100.00%
Bootstrap support for H3B751 as seed ortholog is 100%.
Bootstrap support for B3L4C7 as seed ortholog is 100%.

Group of orthologs #413. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:40 P.knowlesi:74

H3AHU7              	100.00%		B3L0A3              	100.00%
Bootstrap support for H3AHU7 as seed ortholog is 78%.
Bootstrap support for B3L0A3 as seed ortholog is 95%.

Group of orthologs #414. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 P.knowlesi:228

H3AQC8              	100.00%		B3L0U1              	100.00%
Bootstrap support for H3AQC8 as seed ortholog is 100%.
Bootstrap support for B3L0U1 as seed ortholog is 100%.

Group of orthologs #415. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.knowlesi:87

H3BFJ0              	100.00%		B3KZA2              	100.00%
Bootstrap support for H3BFJ0 as seed ortholog is 97%.
Bootstrap support for B3KZA2 as seed ortholog is 99%.

Group of orthologs #416. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 P.knowlesi:228

H3B6U1              	100.00%		B3LAT7              	100.00%
Bootstrap support for H3B6U1 as seed ortholog is 100%.
Bootstrap support for B3LAT7 as seed ortholog is 100%.

Group of orthologs #417. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.knowlesi:87

H3B6Y3              	100.00%		B3LD60              	100.00%
Bootstrap support for H3B6Y3 as seed ortholog is 97%.
Bootstrap support for B3LD60 as seed ortholog is 92%.

Group of orthologs #418. Best score 227 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.knowlesi:56

H3B1U6              	100.00%		B3L4U0              	100.00%
H2ZVH9              	69.70%		
H2ZWK3              	20.08%		
H3B7L5              	17.05%		
M3XH68              	7.95%		
Bootstrap support for H3B1U6 as seed ortholog is 93%.
Bootstrap support for B3L4U0 as seed ortholog is 90%.

Group of orthologs #419. Best score 227 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.knowlesi:227

H3AFT1              	100.00%		B3LB98              	100.00%
H3BEJ3              	100.00%		
H3BE86              	7.67%		
Bootstrap support for H3AFT1 as seed ortholog is 70%.
Alternative seed ortholog is H3A489 (51 bits away from this cluster)
Bootstrap support for H3BEJ3 as seed ortholog is 80%.
Bootstrap support for B3LB98 as seed ortholog is 100%.

Group of orthologs #420. Best score 227 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.knowlesi:227

H3A8B6              	100.00%		B3L4Z6              	100.00%
Bootstrap support for H3A8B6 as seed ortholog is 99%.
Bootstrap support for B3L4Z6 as seed ortholog is 100%.

Group of orthologs #421. Best score 225 bits
Score difference with first non-orthologous sequence - L.chalumnae:225 P.knowlesi:225

H2ZYS5              	100.00%		B3LAK2              	100.00%
Bootstrap support for H2ZYS5 as seed ortholog is 100%.
Bootstrap support for B3LAK2 as seed ortholog is 100%.

Group of orthologs #422. Best score 225 bits
Score difference with first non-orthologous sequence - L.chalumnae:225 P.knowlesi:225

H3AWV3              	100.00%		B3L714              	100.00%
Bootstrap support for H3AWV3 as seed ortholog is 100%.
Bootstrap support for B3L714 as seed ortholog is 100%.

Group of orthologs #423. Best score 224 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.knowlesi:85

H3BAB0              	100.00%		B3L918              	100.00%
H3BHN8              	58.62%		
Bootstrap support for H3BAB0 as seed ortholog is 99%.
Bootstrap support for B3L918 as seed ortholog is 99%.

Group of orthologs #424. Best score 224 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.knowlesi:224

H3APX4              	100.00%		B3LAY5              	100.00%
Bootstrap support for H3APX4 as seed ortholog is 99%.
Bootstrap support for B3LAY5 as seed ortholog is 100%.

Group of orthologs #425. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.knowlesi:149

H3ARG2              	100.00%		B3LDB1              	100.00%
H3AFV9              	76.83%		
H3AX06              	8.99%		
Bootstrap support for H3ARG2 as seed ortholog is 99%.
Bootstrap support for B3LDB1 as seed ortholog is 99%.

Group of orthologs #426. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.knowlesi:23

H3AYF4              	100.00%		B3LBG1              	100.00%
H3AWK9              	66.52%		
H3B8M1              	59.56%		
Bootstrap support for H3AYF4 as seed ortholog is 99%.
Bootstrap support for B3LBG1 as seed ortholog is 66%.
Alternative seed ortholog is B3L8T8 (23 bits away from this cluster)

Group of orthologs #427. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 P.knowlesi:223

H3AIQ7              	100.00%		B3LAR7              	100.00%
H3A7A8              	73.97%		
Bootstrap support for H3AIQ7 as seed ortholog is 100%.
Bootstrap support for B3LAR7 as seed ortholog is 100%.

Group of orthologs #428. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 P.knowlesi:223

H3A1Q8              	100.00%		B3LAU8              	100.00%
Bootstrap support for H3A1Q8 as seed ortholog is 100%.
Bootstrap support for B3LAU8 as seed ortholog is 100%.

Group of orthologs #429. Best score 222 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.knowlesi:64

H3ANM8              	100.00%		B3KZK6              	100.00%
H3BI60              	64.59%		
H3A6H8              	62.20%		
H3AAT1              	46.41%		
Bootstrap support for H3ANM8 as seed ortholog is 98%.
Bootstrap support for B3KZK6 as seed ortholog is 97%.

Group of orthologs #430. Best score 222 bits
Score difference with first non-orthologous sequence - L.chalumnae:222 P.knowlesi:222

H3AC17              	100.00%		B3LAS9              	100.00%
Bootstrap support for H3AC17 as seed ortholog is 100%.
Bootstrap support for B3LAS9 as seed ortholog is 100%.

Group of orthologs #431. Best score 221 bits
Score difference with first non-orthologous sequence - L.chalumnae:221 P.knowlesi:221

H3B8Y3              	100.00%		B3KZ85              	100.00%
H3B123              	54.04%		
H3B4I2              	44.71%		
H3BC75              	21.55%		
H3BHR9              	16.64%		
H3AYF6              	16.17%		
H3ANS4              	16.09%		
H3ATM5              	16.04%		
Bootstrap support for H3B8Y3 as seed ortholog is 100%.
Bootstrap support for B3KZ85 as seed ortholog is 100%.

Group of orthologs #432. Best score 221 bits
Score difference with first non-orthologous sequence - L.chalumnae:221 P.knowlesi:221

H2ZW85              	100.00%		B3L2K6              	100.00%
Bootstrap support for H2ZW85 as seed ortholog is 100%.
Bootstrap support for B3L2K6 as seed ortholog is 100%.

Group of orthologs #433. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.knowlesi:84

H2ZYV5              	100.00%		B3L728              	100.00%
H3AHC5              	35.63%		B3LAR8              	17.58%
H3AN94              	23.99%		
Bootstrap support for H2ZYV5 as seed ortholog is 98%.
Bootstrap support for B3L728 as seed ortholog is 99%.

Group of orthologs #434. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:220 P.knowlesi:220

H3A0A8              	100.00%		B3L1B5              	100.00%
H3BHW4              	95.88%		
Bootstrap support for H3A0A8 as seed ortholog is 100%.
Bootstrap support for B3L1B5 as seed ortholog is 100%.

Group of orthologs #435. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.knowlesi:220

H3AHU2              	100.00%		B3L6W2              	100.00%
H3A2K8              	17.00%		
Bootstrap support for H3AHU2 as seed ortholog is 100%.
Bootstrap support for B3L6W2 as seed ortholog is 100%.

Group of orthologs #436. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:220 P.knowlesi:145

H3AM61              	100.00%		B3L020              	100.00%
Bootstrap support for H3AM61 as seed ortholog is 100%.
Bootstrap support for B3L020 as seed ortholog is 99%.

Group of orthologs #437. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.knowlesi:112

H3ACK3              	100.00%		B3L826              	100.00%
Bootstrap support for H3ACK3 as seed ortholog is 99%.
Bootstrap support for B3L826 as seed ortholog is 98%.

Group of orthologs #438. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.knowlesi:220

H3ANH2              	100.00%		B3L430              	100.00%
Bootstrap support for H3ANH2 as seed ortholog is 99%.
Bootstrap support for B3L430 as seed ortholog is 100%.

Group of orthologs #439. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:220 P.knowlesi:220

H3AWF8              	100.00%		B3L9V4              	100.00%
Bootstrap support for H3AWF8 as seed ortholog is 100%.
Bootstrap support for B3L9V4 as seed ortholog is 100%.

Group of orthologs #440. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:220 P.knowlesi:220

H3AXW3              	100.00%		B3LB55              	100.00%
Bootstrap support for H3AXW3 as seed ortholog is 100%.
Bootstrap support for B3LB55 as seed ortholog is 100%.

Group of orthologs #441. Best score 219 bits
Score difference with first non-orthologous sequence - L.chalumnae:219 P.knowlesi:219

H3AWD6              	100.00%		B3LCL9              	100.00%
H3B8J7              	81.80%		
Bootstrap support for H3AWD6 as seed ortholog is 100%.
Bootstrap support for B3LCL9 as seed ortholog is 100%.

Group of orthologs #442. Best score 219 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 P.knowlesi:219

H3ATB7              	100.00%		B3LAS6              	100.00%
Bootstrap support for H3ATB7 as seed ortholog is 98%.
Bootstrap support for B3LAS6 as seed ortholog is 100%.

Group of orthologs #443. Best score 219 bits
Score difference with first non-orthologous sequence - L.chalumnae:219 P.knowlesi:219

H3B3U1              	100.00%		B3L7Q9              	100.00%
Bootstrap support for H3B3U1 as seed ortholog is 100%.
Bootstrap support for B3L7Q9 as seed ortholog is 100%.

Group of orthologs #444. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.knowlesi:82

H3AFA5              	100.00%		B3L5Q4              	100.00%
H3B1V4              	76.32%		
H3A850              	75.00%		
Bootstrap support for H3AFA5 as seed ortholog is 99%.
Bootstrap support for B3L5Q4 as seed ortholog is 99%.

Group of orthologs #445. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:218 P.knowlesi:218

H2ZWM9              	100.00%		B3L3L2              	100.00%
Bootstrap support for H2ZWM9 as seed ortholog is 100%.
Bootstrap support for B3L3L2 as seed ortholog is 100%.

Group of orthologs #446. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.knowlesi:71

H3A8K0              	100.00%		B3L239              	100.00%
Bootstrap support for H3A8K0 as seed ortholog is 100%.
Bootstrap support for B3L239 as seed ortholog is 99%.

Group of orthologs #447. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.knowlesi:217

H3A660              	100.00%		B3L5R4              	100.00%
Bootstrap support for H3A660 as seed ortholog is 99%.
Bootstrap support for B3L5R4 as seed ortholog is 100%.

Group of orthologs #448. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:217 P.knowlesi:217

H3A2U3              	100.00%		B3LA03              	100.00%
Bootstrap support for H3A2U3 as seed ortholog is 100%.
Bootstrap support for B3LA03 as seed ortholog is 100%.

Group of orthologs #449. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:217 P.knowlesi:170

H3BDV5              	100.00%		B3LAC8              	100.00%
Bootstrap support for H3BDV5 as seed ortholog is 100%.
Bootstrap support for B3LAC8 as seed ortholog is 99%.

Group of orthologs #450. Best score 216 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.knowlesi:216

M3XHJ4              	100.00%		B3L9P9              	100.00%
H3B6Y2              	40.12%		
Bootstrap support for M3XHJ4 as seed ortholog is 82%.
Bootstrap support for B3L9P9 as seed ortholog is 100%.

Group of orthologs #451. Best score 216 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.knowlesi:83

H3A1W6              	100.00%		B3KZZ3              	100.00%
Bootstrap support for H3A1W6 as seed ortholog is 99%.
Bootstrap support for B3KZZ3 as seed ortholog is 99%.

Group of orthologs #452. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 P.knowlesi:215

H3BG01              	100.00%		B3KZ72              	100.00%
H3BE45              	61.51%		
Bootstrap support for H3BG01 as seed ortholog is 100%.
Bootstrap support for B3KZ72 as seed ortholog is 100%.

Group of orthologs #453. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.knowlesi:128

H3B073              	100.00%		B3L4G3              	100.00%
Bootstrap support for H3B073 as seed ortholog is 98%.
Bootstrap support for B3L4G3 as seed ortholog is 99%.

Group of orthologs #454. Best score 214 bits
Score difference with first non-orthologous sequence - L.chalumnae:214 P.knowlesi:20

H3B1R8              	100.00%		B3L4H4              	100.00%
H3BEA5              	32.91%		
H3B2B9              	32.83%		
H2ZRX0              	6.62%		
Bootstrap support for H3B1R8 as seed ortholog is 100%.
Bootstrap support for B3L4H4 as seed ortholog is 43%.
Alternative seed ortholog is B3L5R0 (20 bits away from this cluster)

Group of orthologs #455. Best score 214 bits
Score difference with first non-orthologous sequence - L.chalumnae:214 P.knowlesi:214

H3B542              	100.00%		B3L0E1              	100.00%
Bootstrap support for H3B542 as seed ortholog is 100%.
Bootstrap support for B3L0E1 as seed ortholog is 100%.

Group of orthologs #456. Best score 213 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.knowlesi:53

H3AV19              	100.00%		B3L068              	100.00%
H3AVR3              	49.59%		
H3B5X6              	29.05%		
Bootstrap support for H3AV19 as seed ortholog is 94%.
Bootstrap support for B3L068 as seed ortholog is 94%.

Group of orthologs #457. Best score 213 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.knowlesi:136

H3B2F5              	100.00%		B3L695              	100.00%
H3BFS9              	34.81%		
Bootstrap support for H3B2F5 as seed ortholog is 100%.
Bootstrap support for B3L695 as seed ortholog is 99%.

Group of orthologs #458. Best score 213 bits
Score difference with first non-orthologous sequence - L.chalumnae:213 P.knowlesi:170

H3BFS3              	100.00%		B3LAD9              	100.00%
Bootstrap support for H3BFS3 as seed ortholog is 100%.
Bootstrap support for B3LAD9 as seed ortholog is 100%.

Group of orthologs #459. Best score 212 bits
Score difference with first non-orthologous sequence - L.chalumnae:212 P.knowlesi:212

H3AN65              	100.00%		B3L734              	100.00%
H3BBR9              	23.86%		
Bootstrap support for H3AN65 as seed ortholog is 100%.
Bootstrap support for B3L734 as seed ortholog is 100%.

Group of orthologs #460. Best score 212 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.knowlesi:212

M3XLC8              	100.00%		B3LAB7              	100.00%
                    	       		B3KZ15              	32.20%
Bootstrap support for M3XLC8 as seed ortholog is 96%.
Bootstrap support for B3LAB7 as seed ortholog is 100%.

Group of orthologs #461. Best score 212 bits
Score difference with first non-orthologous sequence - L.chalumnae:212 P.knowlesi:212

H3A7D7              	100.00%		B3L5J4              	100.00%
Bootstrap support for H3A7D7 as seed ortholog is 100%.
Bootstrap support for B3L5J4 as seed ortholog is 100%.

Group of orthologs #462. Best score 212 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.knowlesi:212

H3BAZ5              	100.00%		B3L598              	100.00%
Bootstrap support for H3BAZ5 as seed ortholog is 99%.
Bootstrap support for B3L598 as seed ortholog is 100%.

Group of orthologs #463. Best score 212 bits
Score difference with first non-orthologous sequence - L.chalumnae:212 P.knowlesi:212

H3BAG8              	100.00%		B3L7M5              	100.00%
Bootstrap support for H3BAG8 as seed ortholog is 100%.
Bootstrap support for B3L7M5 as seed ortholog is 100%.

Group of orthologs #464. Best score 211 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.knowlesi:211

H3A689              	100.00%		B3LDF7              	100.00%
H3A705              	59.01%		
H3B791              	46.30%		
H3AGI6              	32.68%		
H3B3J1              	25.03%		
H3AJG8              	24.77%		
Bootstrap support for H3A689 as seed ortholog is 99%.
Bootstrap support for B3LDF7 as seed ortholog is 100%.

Group of orthologs #465. Best score 210 bits
Score difference with first non-orthologous sequence - L.chalumnae:210 P.knowlesi:210

H3BGP9              	100.00%		B3L2P9              	100.00%
H3AZL8              	9.47%		
H3AFP6              	5.55%		
Bootstrap support for H3BGP9 as seed ortholog is 100%.
Bootstrap support for B3L2P9 as seed ortholog is 100%.

Group of orthologs #466. Best score 210 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.knowlesi:210

H2ZZA6              	100.00%		B3L9Q8              	100.00%
Bootstrap support for H2ZZA6 as seed ortholog is 99%.
Bootstrap support for B3L9Q8 as seed ortholog is 100%.

Group of orthologs #467. Best score 210 bits
Score difference with first non-orthologous sequence - L.chalumnae:210 P.knowlesi:210

H3B6D3              	100.00%		B3L698              	100.00%
Bootstrap support for H3B6D3 as seed ortholog is 100%.
Bootstrap support for B3L698 as seed ortholog is 100%.

Group of orthologs #468. Best score 209 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.knowlesi:209

H3A233              	100.00%		B3L152              	100.00%
Bootstrap support for H3A233 as seed ortholog is 98%.
Bootstrap support for B3L152 as seed ortholog is 100%.

Group of orthologs #469. Best score 209 bits
Score difference with first non-orthologous sequence - L.chalumnae:209 P.knowlesi:209

H3BCB1              	100.00%		B3L191              	100.00%
Bootstrap support for H3BCB1 as seed ortholog is 100%.
Bootstrap support for B3L191 as seed ortholog is 100%.

Group of orthologs #470. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 P.knowlesi:208

H3AHH4              	100.00%		B3L7H2              	100.00%
Bootstrap support for H3AHH4 as seed ortholog is 100%.
Bootstrap support for B3L7H2 as seed ortholog is 100%.

Group of orthologs #471. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 P.knowlesi:208

H3B890              	100.00%		B3KZC5              	100.00%
Bootstrap support for H3B890 as seed ortholog is 100%.
Bootstrap support for B3KZC5 as seed ortholog is 100%.

Group of orthologs #472. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:5 P.knowlesi:47

H3B2Z2              	100.00%		B3L3Y1              	100.00%
Bootstrap support for H3B2Z2 as seed ortholog is 57%.
Alternative seed ortholog is H3ARE9 (5 bits away from this cluster)
Bootstrap support for B3L3Y1 as seed ortholog is 97%.

Group of orthologs #473. Best score 207 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.knowlesi:207

H3AVP6              	100.00%		B3L103              	100.00%
Bootstrap support for H3AVP6 as seed ortholog is 99%.
Bootstrap support for B3L103 as seed ortholog is 100%.

Group of orthologs #474. Best score 207 bits
Score difference with first non-orthologous sequence - L.chalumnae:39 P.knowlesi:207

H3B8D6              	100.00%		B3LA05              	100.00%
Bootstrap support for H3B8D6 as seed ortholog is 93%.
Bootstrap support for B3LA05 as seed ortholog is 100%.

Group of orthologs #475. Best score 207 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 P.knowlesi:207

H3BF19              	100.00%		B3L5F7              	100.00%
Bootstrap support for H3BF19 as seed ortholog is 100%.
Bootstrap support for B3L5F7 as seed ortholog is 100%.

Group of orthologs #476. Best score 206 bits
Score difference with first non-orthologous sequence - L.chalumnae:3 P.knowlesi:206

H3BC00              	100.00%		B3KZK0              	100.00%
M3XGJ9              	23.71%		
Bootstrap support for H3BC00 as seed ortholog is 51%.
Alternative seed ortholog is H3AQE2 (3 bits away from this cluster)
Bootstrap support for B3KZK0 as seed ortholog is 100%.

Group of orthologs #477. Best score 206 bits
Score difference with first non-orthologous sequence - L.chalumnae:206 P.knowlesi:206

H3ADV7              	100.00%		B3LD49              	100.00%
Bootstrap support for H3ADV7 as seed ortholog is 100%.
Bootstrap support for B3LD49 as seed ortholog is 100%.

Group of orthologs #478. Best score 206 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.knowlesi:206

H3AZZ8              	100.00%		B3LA78              	100.00%
Bootstrap support for H3AZZ8 as seed ortholog is 99%.
Bootstrap support for B3LA78 as seed ortholog is 100%.

Group of orthologs #479. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 P.knowlesi:205

H2ZZ69              	100.00%		B3L124              	100.00%
H3BFM5              	100.00%		
Bootstrap support for H2ZZ69 as seed ortholog is 100%.
Bootstrap support for H3BFM5 as seed ortholog is 100%.
Bootstrap support for B3L124 as seed ortholog is 100%.

Group of orthologs #480. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 P.knowlesi:205

H3AX99              	100.00%		B3LA43              	100.00%
M3XGH3              	52.07%		
Bootstrap support for H3AX99 as seed ortholog is 100%.
Bootstrap support for B3LA43 as seed ortholog is 100%.

Group of orthologs #481. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 P.knowlesi:86

H3A6U6              	100.00%		B3L024              	100.00%
Bootstrap support for H3A6U6 as seed ortholog is 100%.
Bootstrap support for B3L024 as seed ortholog is 96%.

Group of orthologs #482. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 P.knowlesi:205

H3AZH1              	100.00%		B3L5V6              	100.00%
Bootstrap support for H3AZH1 as seed ortholog is 100%.
Bootstrap support for B3L5V6 as seed ortholog is 100%.

Group of orthologs #483. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 P.knowlesi:205

H3B0X8              	100.00%		B3L6X3              	100.00%
Bootstrap support for H3B0X8 as seed ortholog is 100%.
Bootstrap support for B3L6X3 as seed ortholog is 100%.

Group of orthologs #484. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 P.knowlesi:205

H3BHH6              	100.00%		B3L0W6              	100.00%
Bootstrap support for H3BHH6 as seed ortholog is 100%.
Bootstrap support for B3L0W6 as seed ortholog is 100%.

Group of orthologs #485. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:22 P.knowlesi:12

H3BH41              	100.00%		B3L0H8              	100.00%
H3A6I1              	31.27%		B3L8L4              	15.67%
H2ZYK1              	9.76%		B3L498              	11.27%
H3AT43              	7.52%		
H2ZZN6              	7.39%		
H3BBR2              	6.99%		
Bootstrap support for H3BH41 as seed ortholog is 74%.
Alternative seed ortholog is H3A429 (22 bits away from this cluster)
Bootstrap support for B3L0H8 as seed ortholog is 67%.
Alternative seed ortholog is B3LD00 (12 bits away from this cluster)

Group of orthologs #486. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.knowlesi:98

H3A858              	100.00%		B3L2G9              	100.00%
H3AGI3              	91.73%		
Bootstrap support for H3A858 as seed ortholog is 99%.
Bootstrap support for B3L2G9 as seed ortholog is 99%.

Group of orthologs #487. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:204 P.knowlesi:204

H3B466              	100.00%		B3L8K9              	100.00%
H3BEE7              	52.29%		
Bootstrap support for H3B466 as seed ortholog is 100%.
Bootstrap support for B3L8K9 as seed ortholog is 100%.

Group of orthologs #488. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:204 P.knowlesi:204

H3ARL2              	100.00%		B3L1A5              	100.00%
Bootstrap support for H3ARL2 as seed ortholog is 100%.
Bootstrap support for B3L1A5 as seed ortholog is 100%.

Group of orthologs #489. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.knowlesi:204

H3B4N2              	100.00%		B3L9V6              	100.00%
Bootstrap support for H3B4N2 as seed ortholog is 96%.
Bootstrap support for B3L9V6 as seed ortholog is 100%.

Group of orthologs #490. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:204 P.knowlesi:204

M3XKT6              	100.00%		B3LCB8              	100.00%
Bootstrap support for M3XKT6 as seed ortholog is 100%.
Bootstrap support for B3LCB8 as seed ortholog is 100%.

Group of orthologs #491. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.knowlesi:28

M3XHT1              	100.00%		B3LC83              	100.00%
H3ANU5              	96.43%		
H3B917              	90.18%		
Bootstrap support for M3XHT1 as seed ortholog is 99%.
Bootstrap support for B3LC83 as seed ortholog is 91%.

Group of orthologs #492. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.knowlesi:203

H3A263              	100.00%		B3L5Y6              	100.00%
Bootstrap support for H3A263 as seed ortholog is 99%.
Bootstrap support for B3L5Y6 as seed ortholog is 100%.

Group of orthologs #493. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:203 P.knowlesi:203

H3A7I4              	100.00%		B3L963              	100.00%
Bootstrap support for H3A7I4 as seed ortholog is 100%.
Bootstrap support for B3L963 as seed ortholog is 100%.

Group of orthologs #494. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:203 P.knowlesi:203

H3AMK4              	100.00%		B3LBZ3              	100.00%
Bootstrap support for H3AMK4 as seed ortholog is 100%.
Bootstrap support for B3LBZ3 as seed ortholog is 100%.

Group of orthologs #495. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 P.knowlesi:95

H3AUB6              	100.00%		B3L8M3              	100.00%
Bootstrap support for H3AUB6 as seed ortholog is 99%.
Bootstrap support for B3L8M3 as seed ortholog is 98%.

Group of orthologs #496. Best score 202 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.knowlesi:202

H3A380              	100.00%		B3LAC7              	100.00%
H3BEL1              	57.56%		
H3AMB7              	5.92%		
H3B4U4              	5.74%		
Bootstrap support for H3A380 as seed ortholog is 99%.
Bootstrap support for B3LAC7 as seed ortholog is 100%.

Group of orthologs #497. Best score 202 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.knowlesi:117

H3ARJ2              	100.00%		B3L1J2              	100.00%
H3BBT9              	39.20%		
Bootstrap support for H3ARJ2 as seed ortholog is 99%.
Bootstrap support for B3L1J2 as seed ortholog is 100%.

Group of orthologs #498. Best score 202 bits
Score difference with first non-orthologous sequence - L.chalumnae:202 P.knowlesi:202

H2ZZ48              	100.00%		B3L7T1              	100.00%
Bootstrap support for H2ZZ48 as seed ortholog is 100%.
Bootstrap support for B3L7T1 as seed ortholog is 100%.

Group of orthologs #499. Best score 202 bits
Score difference with first non-orthologous sequence - L.chalumnae:202 P.knowlesi:124

H3A7U7              	100.00%		B3L3I6              	100.00%
Bootstrap support for H3A7U7 as seed ortholog is 100%.
Bootstrap support for B3L3I6 as seed ortholog is 100%.

Group of orthologs #500. Best score 202 bits
Score difference with first non-orthologous sequence - L.chalumnae:202 P.knowlesi:202

H3AFQ6              	100.00%		B3L3I1              	100.00%
Bootstrap support for H3AFQ6 as seed ortholog is 100%.
Bootstrap support for B3L3I1 as seed ortholog is 100%.

Group of orthologs #501. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:201 P.knowlesi:201

H3ASY8              	100.00%		B3L5K2              	100.00%
Bootstrap support for H3ASY8 as seed ortholog is 100%.
Bootstrap support for B3L5K2 as seed ortholog is 100%.

Group of orthologs #502. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.knowlesi:85

H3AYW3              	100.00%		B3L4Y4              	100.00%
H2ZWG2              	24.22%		
Bootstrap support for H3AYW3 as seed ortholog is 99%.
Bootstrap support for B3L4Y4 as seed ortholog is 99%.

Group of orthologs #503. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.knowlesi:98

H3AF23              	100.00%		B3L5Z0              	100.00%
Bootstrap support for H3AF23 as seed ortholog is 99%.
Bootstrap support for B3L5Z0 as seed ortholog is 100%.

Group of orthologs #504. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.knowlesi:43

H3AB20              	100.00%		B3L9W5              	100.00%
Bootstrap support for H3AB20 as seed ortholog is 81%.
Bootstrap support for B3L9W5 as seed ortholog is 66%.
Alternative seed ortholog is B3L8Q6 (43 bits away from this cluster)

Group of orthologs #505. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:200 P.knowlesi:155

H3ATQ9              	100.00%		B3L2K3              	100.00%
Bootstrap support for H3ATQ9 as seed ortholog is 100%.
Bootstrap support for B3L2K3 as seed ortholog is 99%.

Group of orthologs #506. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:200 P.knowlesi:110

H3B2B1              	100.00%		B3L7S1              	100.00%
Bootstrap support for H3B2B1 as seed ortholog is 100%.
Bootstrap support for B3L7S1 as seed ortholog is 98%.

Group of orthologs #507. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:200 P.knowlesi:200

H3AZE6              	100.00%		B3LA90              	100.00%
Bootstrap support for H3AZE6 as seed ortholog is 100%.
Bootstrap support for B3LA90 as seed ortholog is 100%.

Group of orthologs #508. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:200 P.knowlesi:200

H3BFG1              	100.00%		B3L3I5              	100.00%
Bootstrap support for H3BFG1 as seed ortholog is 100%.
Bootstrap support for B3L3I5 as seed ortholog is 100%.

Group of orthologs #509. Best score 199 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.knowlesi:46

H3ALY9              	100.00%		B3L1Y3              	100.00%
H3A940              	28.09%		
H3AAF2              	21.77%		
H3BEM2              	12.77%		
Bootstrap support for H3ALY9 as seed ortholog is 99%.
Bootstrap support for B3L1Y3 as seed ortholog is 62%.
Alternative seed ortholog is B3L3H4 (46 bits away from this cluster)

Group of orthologs #510. Best score 199 bits
Score difference with first non-orthologous sequence - L.chalumnae:199 P.knowlesi:101

H3B1W4              	100.00%		B3L789              	100.00%
H3AAP0              	71.62%		
H2ZRP5              	34.06%		
Bootstrap support for H3B1W4 as seed ortholog is 100%.
Bootstrap support for B3L789 as seed ortholog is 99%.

Group of orthologs #511. Best score 199 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 P.knowlesi:199

H3AIZ6              	100.00%		B3L4L9              	100.00%
Bootstrap support for H3AIZ6 as seed ortholog is 96%.
Bootstrap support for B3L4L9 as seed ortholog is 100%.

Group of orthologs #512. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.knowlesi:198

H3ANL4              	100.00%		B3L2P4              	100.00%
Bootstrap support for H3ANL4 as seed ortholog is 100%.
Bootstrap support for B3L2P4 as seed ortholog is 100%.

Group of orthologs #513. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.knowlesi:198

H3B1T6              	100.00%		B3L1Y5              	100.00%
Bootstrap support for H3B1T6 as seed ortholog is 100%.
Bootstrap support for B3L1Y5 as seed ortholog is 100%.

Group of orthologs #514. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.knowlesi:198

H3AQQ6              	100.00%		B3LBQ5              	100.00%
Bootstrap support for H3AQQ6 as seed ortholog is 100%.
Bootstrap support for B3LBQ5 as seed ortholog is 100%.

Group of orthologs #515. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.knowlesi:198

H3AX22              	100.00%		B3LAL0              	100.00%
Bootstrap support for H3AX22 as seed ortholog is 100%.
Bootstrap support for B3LAL0 as seed ortholog is 100%.

Group of orthologs #516. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.knowlesi:198

H3BGJ4              	100.00%		B3L2G0              	100.00%
Bootstrap support for H3BGJ4 as seed ortholog is 100%.
Bootstrap support for B3L2G0 as seed ortholog is 100%.

Group of orthologs #517. Best score 197 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 P.knowlesi:197

H3A5H1              	100.00%		B3L4K2              	100.00%
Bootstrap support for H3A5H1 as seed ortholog is 100%.
Bootstrap support for B3L4K2 as seed ortholog is 100%.

Group of orthologs #518. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 P.knowlesi:139

H3A5R1              	100.00%		B3L8R4              	100.00%
H3ADD1              	94.12%		
Bootstrap support for H3A5R1 as seed ortholog is 100%.
Bootstrap support for B3L8R4 as seed ortholog is 100%.

Group of orthologs #519. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:24 P.knowlesi:32

H3ALP3              	100.00%		B3KZ74              	100.00%
H3AT07              	65.91%		
Bootstrap support for H3ALP3 as seed ortholog is 84%.
Bootstrap support for B3KZ74 as seed ortholog is 87%.

Group of orthologs #520. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.knowlesi:196

H3AA08              	100.00%		B3L6V5              	100.00%
Bootstrap support for H3AA08 as seed ortholog is 99%.
Bootstrap support for B3L6V5 as seed ortholog is 100%.

Group of orthologs #521. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 P.knowlesi:42

H3AAA4              	100.00%		B3L702              	100.00%
Bootstrap support for H3AAA4 as seed ortholog is 100%.
Bootstrap support for B3L702 as seed ortholog is 91%.

Group of orthologs #522. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:35 P.knowlesi:130

M3XK55              	100.00%		B3L3M8              	100.00%
Bootstrap support for M3XK55 as seed ortholog is 92%.
Bootstrap support for B3L3M8 as seed ortholog is 100%.

Group of orthologs #523. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:195 P.knowlesi:195

H2ZXK8              	100.00%		B3L435              	100.00%
Bootstrap support for H2ZXK8 as seed ortholog is 100%.
Bootstrap support for B3L435 as seed ortholog is 100%.

Group of orthologs #524. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:195 P.knowlesi:195

H3B2B2              	100.00%		B3L610              	100.00%
Bootstrap support for H3B2B2 as seed ortholog is 100%.
Bootstrap support for B3L610 as seed ortholog is 100%.

Group of orthologs #525. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.knowlesi:16

H3B1M9              	100.00%		B3L480              	100.00%
H3BGH6              	33.33%		
H3A5Z4              	29.56%		
H3BGI6              	29.39%		
Bootstrap support for H3B1M9 as seed ortholog is 99%.
Bootstrap support for B3L480 as seed ortholog is 66%.
Alternative seed ortholog is B3KZ64 (16 bits away from this cluster)

Group of orthologs #526. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:194 P.knowlesi:194

H3B3H8              	100.00%		B3LC03              	100.00%
Bootstrap support for H3B3H8 as seed ortholog is 100%.
Bootstrap support for B3LC03 as seed ortholog is 100%.

Group of orthologs #527. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:194 P.knowlesi:194

M3XKR4              	100.00%		B3L9F2              	100.00%
Bootstrap support for M3XKR4 as seed ortholog is 100%.
Bootstrap support for B3L9F2 as seed ortholog is 100%.

Group of orthologs #528. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 P.knowlesi:193

H3BD04              	100.00%		B3LC99              	100.00%
H3A6N8              	24.29%		
H3A501              	23.31%		
H3A1J5              	13.49%		
H3ASC6              	9.37%		
Bootstrap support for H3BD04 as seed ortholog is 100%.
Bootstrap support for B3LC99 as seed ortholog is 100%.

Group of orthologs #529. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 P.knowlesi:193

H3AJK7              	100.00%		B3L749              	100.00%
H3ABN5              	6.52%		
Bootstrap support for H3AJK7 as seed ortholog is 100%.
Bootstrap support for B3L749 as seed ortholog is 100%.

Group of orthologs #530. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 P.knowlesi:193

H3A7C3              	100.00%		B3LAE7              	100.00%
Bootstrap support for H3A7C3 as seed ortholog is 100%.
Bootstrap support for B3LAE7 as seed ortholog is 100%.

Group of orthologs #531. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.knowlesi:114

H3AUV4              	100.00%		B3L2A7              	100.00%
Bootstrap support for H3AUV4 as seed ortholog is 100%.
Bootstrap support for B3L2A7 as seed ortholog is 100%.

Group of orthologs #532. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.knowlesi:193

H3B444              	100.00%		B3L5Y9              	100.00%
Bootstrap support for H3B444 as seed ortholog is 99%.
Bootstrap support for B3L5Y9 as seed ortholog is 100%.

Group of orthologs #533. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 P.knowlesi:193

H3BBK7              	100.00%		B3L1J9              	100.00%
Bootstrap support for H3BBK7 as seed ortholog is 100%.
Bootstrap support for B3L1J9 as seed ortholog is 100%.

Group of orthologs #534. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 P.knowlesi:193

H3B520              	100.00%		B3L8Z3              	100.00%
Bootstrap support for H3B520 as seed ortholog is 100%.
Bootstrap support for B3L8Z3 as seed ortholog is 100%.

Group of orthologs #535. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 P.knowlesi:193

H3BIK6              	100.00%		B3L3H1              	100.00%
Bootstrap support for H3BIK6 as seed ortholog is 100%.
Bootstrap support for B3L3H1 as seed ortholog is 100%.

Group of orthologs #536. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.knowlesi:192

H3A131              	100.00%		B3L3R9              	100.00%
H3AL45              	25.43%		
Bootstrap support for H3A131 as seed ortholog is 96%.
Bootstrap support for B3L3R9 as seed ortholog is 100%.

Group of orthologs #537. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:192 P.knowlesi:192

H3BA94              	100.00%		B3L367              	100.00%
Bootstrap support for H3BA94 as seed ortholog is 100%.
Bootstrap support for B3L367 as seed ortholog is 100%.

Group of orthologs #538. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 P.knowlesi:191

H3ASH8              	100.00%		B3L665              	100.00%
Bootstrap support for H3ASH8 as seed ortholog is 100%.
Bootstrap support for B3L665 as seed ortholog is 100%.

Group of orthologs #539. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 P.knowlesi:190

H3AGE7              	100.00%		B3L625              	100.00%
H3AS50              	52.00%		
Bootstrap support for H3AGE7 as seed ortholog is 100%.
Bootstrap support for B3L625 as seed ortholog is 100%.

Group of orthologs #540. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 P.knowlesi:190

H3A560              	100.00%		B3L7Z8              	100.00%
Bootstrap support for H3A560 as seed ortholog is 100%.
Bootstrap support for B3L7Z8 as seed ortholog is 100%.

Group of orthologs #541. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 P.knowlesi:190

H3AM99              	100.00%		B3L8I0              	100.00%
Bootstrap support for H3AM99 as seed ortholog is 100%.
Bootstrap support for B3L8I0 as seed ortholog is 100%.

Group of orthologs #542. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.knowlesi:190

H3AVH8              	100.00%		B3L3Z2              	100.00%
Bootstrap support for H3AVH8 as seed ortholog is 99%.
Bootstrap support for B3L3Z2 as seed ortholog is 100%.

Group of orthologs #543. Best score 189 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.knowlesi:109

H3BBM0              	100.00%		B3L163              	100.00%
Bootstrap support for H3BBM0 as seed ortholog is 99%.
Bootstrap support for B3L163 as seed ortholog is 99%.

Group of orthologs #544. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 P.knowlesi:188

H3AL64              	100.00%		B3LBB3              	100.00%
                    	       		B3L4E9              	76.79%
Bootstrap support for H3AL64 as seed ortholog is 100%.
Bootstrap support for B3LBB3 as seed ortholog is 100%.

Group of orthologs #545. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 P.knowlesi:188

H2ZV22              	100.00%		B3L7Q6              	100.00%
Bootstrap support for H2ZV22 as seed ortholog is 100%.
Bootstrap support for B3L7Q6 as seed ortholog is 100%.

Group of orthologs #546. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 P.knowlesi:188

H3A7U5              	100.00%		B3LAB0              	100.00%
Bootstrap support for H3A7U5 as seed ortholog is 100%.
Bootstrap support for B3LAB0 as seed ortholog is 100%.

Group of orthologs #547. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 P.knowlesi:188

H3AW43              	100.00%		B3L8A6              	100.00%
Bootstrap support for H3AW43 as seed ortholog is 100%.
Bootstrap support for B3L8A6 as seed ortholog is 100%.

Group of orthologs #548. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 P.knowlesi:188

H3B6Y8              	100.00%		B3LC68              	100.00%
Bootstrap support for H3B6Y8 as seed ortholog is 100%.
Bootstrap support for B3LC68 as seed ortholog is 100%.

Group of orthologs #549. Best score 187 bits
Score difference with first non-orthologous sequence - L.chalumnae:187 P.knowlesi:187

H3AK52              	100.00%		B3L879              	100.00%
Bootstrap support for H3AK52 as seed ortholog is 100%.
Bootstrap support for B3L879 as seed ortholog is 100%.

Group of orthologs #550. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 P.knowlesi:102

H3B0A8              	100.00%		B3L1E6              	100.00%
Bootstrap support for H3B0A8 as seed ortholog is 100%.
Bootstrap support for B3L1E6 as seed ortholog is 98%.

Group of orthologs #551. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.knowlesi:186

H3AVJ8              	100.00%		B3LCG6              	100.00%
Bootstrap support for H3AVJ8 as seed ortholog is 99%.
Bootstrap support for B3LCG6 as seed ortholog is 100%.

Group of orthologs #552. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 P.knowlesi:186

H3B2D8              	100.00%		B3LBS0              	100.00%
Bootstrap support for H3B2D8 as seed ortholog is 100%.
Bootstrap support for B3LBS0 as seed ortholog is 100%.

Group of orthologs #553. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 P.knowlesi:186

H3BFL7              	100.00%		B3L4D8              	100.00%
Bootstrap support for H3BFL7 as seed ortholog is 100%.
Bootstrap support for B3L4D8 as seed ortholog is 100%.

Group of orthologs #554. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 P.knowlesi:185

H3B8N0              	100.00%		B3L7N0              	100.00%
H3BE02              	60.53%		
H3A6T6              	48.68%		
H3A0A2              	38.16%		
Bootstrap support for H3B8N0 as seed ortholog is 99%.
Bootstrap support for B3L7N0 as seed ortholog is 100%.

Group of orthologs #555. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.knowlesi:18

H2ZZV4              	100.00%		B3LAT3              	100.00%
H3B4C1              	50.64%		
H3ABJ7              	28.94%		
Bootstrap support for H2ZZV4 as seed ortholog is 99%.
Bootstrap support for B3LAT3 as seed ortholog is 68%.
Alternative seed ortholog is B3KZ64 (18 bits away from this cluster)

Group of orthologs #556. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.knowlesi:185

H3B5W2              	100.00%		B3LAK7              	100.00%
H3A9R7              	59.19%		
Bootstrap support for H3B5W2 as seed ortholog is 99%.
Bootstrap support for B3LAK7 as seed ortholog is 100%.

Group of orthologs #557. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 P.knowlesi:185

H3BDC6              	100.00%		B3L5E5              	100.00%
H3B9R3              	12.91%		
Bootstrap support for H3BDC6 as seed ortholog is 100%.
Bootstrap support for B3L5E5 as seed ortholog is 100%.

Group of orthologs #558. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 P.knowlesi:32

H2ZX24              	100.00%		B3L2B8              	100.00%
Bootstrap support for H2ZX24 as seed ortholog is 100%.
Bootstrap support for B3L2B8 as seed ortholog is 72%.
Alternative seed ortholog is B3KZU0 (32 bits away from this cluster)

Group of orthologs #559. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 P.knowlesi:185

H3AGP5              	100.00%		B3L7H0              	100.00%
Bootstrap support for H3AGP5 as seed ortholog is 100%.
Bootstrap support for B3L7H0 as seed ortholog is 100%.

Group of orthologs #560. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 P.knowlesi:185

H3AV89              	100.00%		B3LBW4              	100.00%
Bootstrap support for H3AV89 as seed ortholog is 100%.
Bootstrap support for B3LBW4 as seed ortholog is 100%.

Group of orthologs #561. Best score 184 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.knowlesi:184

H3APW7              	100.00%		B3L5G8              	100.00%
H2ZRM6              	24.08%		
Bootstrap support for H3APW7 as seed ortholog is 99%.
Bootstrap support for B3L5G8 as seed ortholog is 100%.

Group of orthologs #562. Best score 184 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.knowlesi:184

H2ZWS9              	100.00%		B3L5F0              	100.00%
Bootstrap support for H2ZWS9 as seed ortholog is 99%.
Bootstrap support for B3L5F0 as seed ortholog is 100%.

Group of orthologs #563. Best score 184 bits
Score difference with first non-orthologous sequence - L.chalumnae:184 P.knowlesi:184

M3XJN2              	100.00%		B3L8L2              	100.00%
Bootstrap support for M3XJN2 as seed ortholog is 100%.
Bootstrap support for B3L8L2 as seed ortholog is 100%.

Group of orthologs #564. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 P.knowlesi:183

H3AJI9              	100.00%		B3L386              	100.00%
Bootstrap support for H3AJI9 as seed ortholog is 100%.
Bootstrap support for B3L386 as seed ortholog is 100%.

Group of orthologs #565. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 P.knowlesi:183

H3B293              	100.00%		B3LA48              	100.00%
Bootstrap support for H3B293 as seed ortholog is 100%.
Bootstrap support for B3LA48 as seed ortholog is 100%.

Group of orthologs #566. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.knowlesi:63

H3BF67              	100.00%		B3L5X6              	100.00%
Bootstrap support for H3BF67 as seed ortholog is 99%.
Bootstrap support for B3L5X6 as seed ortholog is 99%.

Group of orthologs #567. Best score 182 bits
Score difference with first non-orthologous sequence - L.chalumnae:182 P.knowlesi:182

H3AAR1              	100.00%		B3KZT0              	100.00%
Bootstrap support for H3AAR1 as seed ortholog is 100%.
Bootstrap support for B3KZT0 as seed ortholog is 100%.

Group of orthologs #568. Best score 182 bits
Score difference with first non-orthologous sequence - L.chalumnae:182 P.knowlesi:81

H3AAV8              	100.00%		B3LA18              	100.00%
Bootstrap support for H3AAV8 as seed ortholog is 100%.
Bootstrap support for B3LA18 as seed ortholog is 99%.

Group of orthologs #569. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 P.knowlesi:180

H3AQU4              	100.00%		B3L7R7              	100.00%
H2ZVN7              	63.57%		
H3B2N2              	41.02%		
Bootstrap support for H3AQU4 as seed ortholog is 100%.
Bootstrap support for B3L7R7 as seed ortholog is 100%.

Group of orthologs #570. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 P.knowlesi:180

H3AP22              	100.00%		B3LD01              	100.00%
H3ALC0              	72.87%		
H3BG19              	52.22%		
Bootstrap support for H3AP22 as seed ortholog is 100%.
Bootstrap support for B3LD01 as seed ortholog is 100%.

Group of orthologs #571. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.knowlesi:180

H3B406              	100.00%		B3LA28              	100.00%
H2ZYG0              	20.71%		B3LCE5              	16.28%
Bootstrap support for H3B406 as seed ortholog is 99%.
Bootstrap support for B3LA28 as seed ortholog is 100%.

Group of orthologs #572. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 P.knowlesi:180

H3AAX8              	100.00%		B3L904              	100.00%
Bootstrap support for H3AAX8 as seed ortholog is 100%.
Bootstrap support for B3L904 as seed ortholog is 100%.

Group of orthologs #573. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 P.knowlesi:180

H3AYX0              	100.00%		B3L9R0              	100.00%
Bootstrap support for H3AYX0 as seed ortholog is 100%.
Bootstrap support for B3L9R0 as seed ortholog is 100%.

Group of orthologs #574. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:25 P.knowlesi:179

H3AZW0              	100.00%		B3L4V3              	59.53%
H3BEF4              	100.00%		B3L4V5              	100.00%
H2ZRS7              	43.33%		B3L4V4              	50.19%
H3AU66              	37.24%		
H3B3H0              	32.54%		
H3A0Y7              	22.12%		
H3A9Q4              	8.78%		
H3BCE0              	6.95%		
Bootstrap support for H3AZW0 as seed ortholog is 73%.
Alternative seed ortholog is H3B6T8 (25 bits away from this cluster)
Bootstrap support for H3BEF4 as seed ortholog is 74%.
Alternative seed ortholog is H3B6T8 (25 bits away from this cluster)
Bootstrap support for B3L4V5 as seed ortholog is 100%.

Group of orthologs #575. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 P.knowlesi:179

H3BA10              	100.00%		B3LC44              	100.00%
H3AI08              	25.87%		
H3AG72              	19.78%		
Bootstrap support for H3BA10 as seed ortholog is 99%.
Bootstrap support for B3LC44 as seed ortholog is 100%.

Group of orthologs #576. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.knowlesi:179

H3AUM5              	100.00%		B3L312              	100.00%
Bootstrap support for H3AUM5 as seed ortholog is 94%.
Bootstrap support for B3L312 as seed ortholog is 100%.

Group of orthologs #577. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:179 P.knowlesi:179

H3B7W6              	100.00%		B3LAU3              	100.00%
Bootstrap support for H3B7W6 as seed ortholog is 100%.
Bootstrap support for B3LAU3 as seed ortholog is 100%.

Group of orthologs #578. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:179 P.knowlesi:179

H3BHX9              	100.00%		B3L441              	100.00%
Bootstrap support for H3BHX9 as seed ortholog is 100%.
Bootstrap support for B3L441 as seed ortholog is 100%.

Group of orthologs #579. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.knowlesi:178

H2ZVH7              	100.00%		B3L0V6              	100.00%
M3XLL5              	17.58%		
H3B1T1              	13.55%		
Bootstrap support for H2ZVH7 as seed ortholog is 100%.
Bootstrap support for B3L0V6 as seed ortholog is 100%.

Group of orthologs #580. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.knowlesi:178

H3BEG5              	100.00%		B3L1K9              	100.00%
M3XI53              	32.07%		
Bootstrap support for H3BEG5 as seed ortholog is 100%.
Bootstrap support for B3L1K9 as seed ortholog is 100%.

Group of orthologs #581. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.knowlesi:178

H3AEW1              	100.00%		B3L4X4              	100.00%
Bootstrap support for H3AEW1 as seed ortholog is 100%.
Bootstrap support for B3L4X4 as seed ortholog is 100%.

Group of orthologs #582. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.knowlesi:178

H3AZS2              	100.00%		B3LB29              	100.00%
Bootstrap support for H3AZS2 as seed ortholog is 100%.
Bootstrap support for B3LB29 as seed ortholog is 100%.

Group of orthologs #583. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.knowlesi:178

H3BFT6              	100.00%		B3L8I6              	100.00%
Bootstrap support for H3BFT6 as seed ortholog is 100%.
Bootstrap support for B3L8I6 as seed ortholog is 100%.

Group of orthologs #584. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.knowlesi:48

H3B947              	100.00%		B3L807              	100.00%
H2ZV04              	38.52%		
H3B4Y9              	33.87%		
Bootstrap support for H3B947 as seed ortholog is 93%.
Bootstrap support for B3L807 as seed ortholog is 92%.

Group of orthologs #585. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:176 P.knowlesi:176

H3BD09              	100.00%		B3L8G3              	100.00%
H3B049              	40.87%		
Bootstrap support for H3BD09 as seed ortholog is 100%.
Bootstrap support for B3L8G3 as seed ortholog is 100%.

Group of orthologs #586. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:176 P.knowlesi:176

H3A0W1              	100.00%		B3LD90              	100.00%
Bootstrap support for H3A0W1 as seed ortholog is 100%.
Bootstrap support for B3LD90 as seed ortholog is 100%.

Group of orthologs #587. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.knowlesi:76

H3ALI9              	100.00%		B3L1P9              	100.00%
Bootstrap support for H3ALI9 as seed ortholog is 99%.
Bootstrap support for B3L1P9 as seed ortholog is 99%.

Group of orthologs #588. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:10 P.knowlesi:176

M3XKG4              	100.00%		B3L0V4              	100.00%
Bootstrap support for M3XKG4 as seed ortholog is 54%.
Alternative seed ortholog is H3B6X4 (10 bits away from this cluster)
Bootstrap support for B3L0V4 as seed ortholog is 100%.

Group of orthologs #589. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 P.knowlesi:175

H3A3X0              	100.00%		B3L673              	100.00%
Bootstrap support for H3A3X0 as seed ortholog is 100%.
Bootstrap support for B3L673 as seed ortholog is 100%.

Group of orthologs #590. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.knowlesi:175

H3AWG7              	100.00%		B3L059              	100.00%
Bootstrap support for H3AWG7 as seed ortholog is 99%.
Bootstrap support for B3L059 as seed ortholog is 100%.

Group of orthologs #591. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 P.knowlesi:175

H3ATK7              	100.00%		B3LDC2              	100.00%
Bootstrap support for H3ATK7 as seed ortholog is 100%.
Bootstrap support for B3LDC2 as seed ortholog is 100%.

Group of orthologs #592. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 P.knowlesi:175

H3B260              	100.00%		B3LC37              	100.00%
Bootstrap support for H3B260 as seed ortholog is 100%.
Bootstrap support for B3LC37 as seed ortholog is 100%.

Group of orthologs #593. Best score 174 bits
Score difference with first non-orthologous sequence - L.chalumnae:174 P.knowlesi:174

H3AIG7              	100.00%		B3L865              	100.00%
H3ABI1              	39.29%		
Bootstrap support for H3AIG7 as seed ortholog is 100%.
Bootstrap support for B3L865 as seed ortholog is 100%.

Group of orthologs #594. Best score 174 bits
Score difference with first non-orthologous sequence - L.chalumnae:174 P.knowlesi:174

H3ARI0              	100.00%		B3L7Y4              	100.00%
Bootstrap support for H3ARI0 as seed ortholog is 100%.
Bootstrap support for B3L7Y4 as seed ortholog is 100%.

Group of orthologs #595. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.knowlesi:173

H3BCQ6              	100.00%		B3L6H9              	100.00%
H3AZT4              	82.73%		
Bootstrap support for H3BCQ6 as seed ortholog is 100%.
Bootstrap support for B3L6H9 as seed ortholog is 100%.

Group of orthologs #596. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.knowlesi:173

H3AWZ9              	100.00%		B3L8Z7              	100.00%
Bootstrap support for H3AWZ9 as seed ortholog is 100%.
Bootstrap support for B3L8Z7 as seed ortholog is 100%.

Group of orthologs #597. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.knowlesi:173

H3B8Y0              	100.00%		B3L948              	100.00%
Bootstrap support for H3B8Y0 as seed ortholog is 100%.
Bootstrap support for B3L948 as seed ortholog is 100%.

Group of orthologs #598. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.knowlesi:172

H2ZUA3              	100.00%		B3LCV6              	100.00%
Bootstrap support for H2ZUA3 as seed ortholog is 99%.
Bootstrap support for B3LCV6 as seed ortholog is 100%.

Group of orthologs #599. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 P.knowlesi:172

H3ARX8              	100.00%		B3L567              	100.00%
Bootstrap support for H3ARX8 as seed ortholog is 100%.
Bootstrap support for B3L567 as seed ortholog is 100%.

Group of orthologs #600. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 P.knowlesi:172

H3B0K1              	100.00%		B3L4B7              	100.00%
Bootstrap support for H3B0K1 as seed ortholog is 100%.
Bootstrap support for B3L4B7 as seed ortholog is 100%.

Group of orthologs #601. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:21 P.knowlesi:53

H3AUD4              	100.00%		B3L5J3              	100.00%
H3AW71              	53.99%		
H3BH13              	53.58%		
Bootstrap support for H3AUD4 as seed ortholog is 41%.
Alternative seed ortholog is H3B3F1 (21 bits away from this cluster)
Bootstrap support for B3L5J3 as seed ortholog is 91%.

Group of orthologs #602. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 P.knowlesi:171

H3BFJ3              	100.00%		B3L325              	100.00%
H3B9C9              	7.56%		
Bootstrap support for H3BFJ3 as seed ortholog is 100%.
Bootstrap support for B3L325 as seed ortholog is 100%.

Group of orthologs #603. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.knowlesi:171

H3AHT1              	100.00%		B3L514              	100.00%
Bootstrap support for H3AHT1 as seed ortholog is 67%.
Alternative seed ortholog is H3B0D2 (78 bits away from this cluster)
Bootstrap support for B3L514 as seed ortholog is 100%.

Group of orthologs #604. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 P.knowlesi:171

H3AQE0              	100.00%		B3LA41              	100.00%
Bootstrap support for H3AQE0 as seed ortholog is 100%.
Bootstrap support for B3LA41 as seed ortholog is 100%.

Group of orthologs #605. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 P.knowlesi:170

H3B9E6              	100.00%		B3L2Y0              	100.00%
H3B0Y1              	50.08%		
H3B2Q7              	44.45%		
H3B529              	14.69%		
M3XH99              	13.05%		
H3A3N1              	10.62%		
H3AUT3              	9.06%		
H3AW26              	7.50%		
H3BH82              	7.42%		
H3AC13              	6.02%		
Bootstrap support for H3B9E6 as seed ortholog is 100%.
Bootstrap support for B3L2Y0 as seed ortholog is 100%.

Group of orthologs #606. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.knowlesi:170

H3A365              	100.00%		B3L7Z1              	100.00%
H3AJA4              	69.14%		
H2ZWK8              	58.92%		
Bootstrap support for H3A365 as seed ortholog is 62%.
Alternative seed ortholog is H3AYM2 (42 bits away from this cluster)
Bootstrap support for B3L7Z1 as seed ortholog is 100%.

Group of orthologs #607. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.knowlesi:170

H2ZSF2              	100.00%		B3L684              	100.00%
Bootstrap support for H2ZSF2 as seed ortholog is 100%.
Bootstrap support for B3L684 as seed ortholog is 100%.

Group of orthologs #608. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 P.knowlesi:170

H3ATE3              	100.00%		B3L635              	100.00%
Bootstrap support for H3ATE3 as seed ortholog is 100%.
Bootstrap support for B3L635 as seed ortholog is 100%.

Group of orthologs #609. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 P.knowlesi:170

H3BBF7              	100.00%		B3L4G2              	100.00%
Bootstrap support for H3BBF7 as seed ortholog is 100%.
Bootstrap support for B3L4G2 as seed ortholog is 100%.

Group of orthologs #610. Best score 169 bits
Score difference with first non-orthologous sequence - L.chalumnae:5 P.knowlesi:21

H2ZWU7              	100.00%		B3L603              	100.00%
H3A2X5              	5.62%		
Bootstrap support for H2ZWU7 as seed ortholog is 57%.
Alternative seed ortholog is H3ASR1 (5 bits away from this cluster)
Bootstrap support for B3L603 as seed ortholog is 74%.
Alternative seed ortholog is B3L082 (21 bits away from this cluster)

Group of orthologs #611. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.knowlesi:64

M3XGK5              	100.00%		B3L2M7              	100.00%
H3B8F7              	80.53%		
H3B317              	8.95%		
H3AI22              	7.37%		
Bootstrap support for M3XGK5 as seed ortholog is 99%.
Bootstrap support for B3L2M7 as seed ortholog is 99%.

Group of orthologs #612. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.knowlesi:168

H3AS63              	100.00%		B3L8R9              	100.00%
H3B655              	55.98%		
Bootstrap support for H3AS63 as seed ortholog is 100%.
Bootstrap support for B3L8R9 as seed ortholog is 100%.

Group of orthologs #613. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.knowlesi:168

H3AV17              	100.00%		B3L023              	100.00%
Bootstrap support for H3AV17 as seed ortholog is 100%.
Bootstrap support for B3L023 as seed ortholog is 100%.

Group of orthologs #614. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.knowlesi:168

H3B2S1              	100.00%		B3L2N5              	100.00%
Bootstrap support for H3B2S1 as seed ortholog is 100%.
Bootstrap support for B3L2N5 as seed ortholog is 100%.

Group of orthologs #615. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.knowlesi:168

H3B205              	100.00%		B3L6K9              	100.00%
Bootstrap support for H3B205 as seed ortholog is 100%.
Bootstrap support for B3L6K9 as seed ortholog is 100%.

Group of orthologs #616. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.knowlesi:168

H3AZ11              	100.00%		B3LA20              	100.00%
Bootstrap support for H3AZ11 as seed ortholog is 100%.
Bootstrap support for B3LA20 as seed ortholog is 100%.

Group of orthologs #617. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 P.knowlesi:167

H3A926              	100.00%		B3L3R4              	100.00%
H3BCU4              	39.93%		
H3ANI3              	38.06%		
Bootstrap support for H3A926 as seed ortholog is 100%.
Bootstrap support for B3L3R4 as seed ortholog is 100%.

Group of orthologs #618. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 P.knowlesi:167

H3AC76              	100.00%		B3L267              	100.00%
M3XL92              	51.87%		
Bootstrap support for H3AC76 as seed ortholog is 100%.
Bootstrap support for B3L267 as seed ortholog is 100%.

Group of orthologs #619. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 P.knowlesi:167

H2ZV14              	100.00%		B3L3T0              	100.00%
Bootstrap support for H2ZV14 as seed ortholog is 100%.
Bootstrap support for B3L3T0 as seed ortholog is 100%.

Group of orthologs #620. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.knowlesi:47

H3A4T6              	100.00%		B3L532              	100.00%
Bootstrap support for H3A4T6 as seed ortholog is 98%.
Bootstrap support for B3L532 as seed ortholog is 74%.
Alternative seed ortholog is B3L9Y7 (47 bits away from this cluster)

Group of orthologs #621. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 P.knowlesi:166

H3B7X9              	100.00%		B3L1I5              	100.00%
Bootstrap support for H3B7X9 as seed ortholog is 100%.
Bootstrap support for B3L1I5 as seed ortholog is 100%.

Group of orthologs #622. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 P.knowlesi:166

H3B9L6              	100.00%		B3L0C6              	100.00%
Bootstrap support for H3B9L6 as seed ortholog is 100%.
Bootstrap support for B3L0C6 as seed ortholog is 100%.

Group of orthologs #623. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 P.knowlesi:166

H3BBY4              	100.00%		B3L2V1              	100.00%
Bootstrap support for H3BBY4 as seed ortholog is 84%.
Bootstrap support for B3L2V1 as seed ortholog is 100%.

Group of orthologs #624. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:35 P.knowlesi:166

H3BEI3              	100.00%		B3L632              	100.00%
Bootstrap support for H3BEI3 as seed ortholog is 79%.
Bootstrap support for B3L632 as seed ortholog is 100%.

Group of orthologs #625. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.knowlesi:166

H3BH59              	100.00%		B3LBH0              	100.00%
Bootstrap support for H3BH59 as seed ortholog is 92%.
Bootstrap support for B3LBH0 as seed ortholog is 100%.

Group of orthologs #626. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:22 P.knowlesi:165

H3AQ30              	100.00%		B3L274              	100.00%
H3AX03              	42.63%		
H3B1M1              	34.12%		
H3AU71              	33.86%		
Bootstrap support for H3AQ30 as seed ortholog is 73%.
Alternative seed ortholog is H3AVE3 (22 bits away from this cluster)
Bootstrap support for B3L274 as seed ortholog is 100%.

Group of orthologs #627. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 P.knowlesi:165

H3A7J5              	100.00%		B3L2Q4              	100.00%
Bootstrap support for H3A7J5 as seed ortholog is 100%.
Bootstrap support for B3L2Q4 as seed ortholog is 100%.

Group of orthologs #628. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 P.knowlesi:165

H3A0F4              	100.00%		B3LCI8              	100.00%
Bootstrap support for H3A0F4 as seed ortholog is 100%.
Bootstrap support for B3LCI8 as seed ortholog is 100%.

Group of orthologs #629. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 P.knowlesi:165

H3A401              	100.00%		B3LA23              	100.00%
Bootstrap support for H3A401 as seed ortholog is 100%.
Bootstrap support for B3LA23 as seed ortholog is 100%.

Group of orthologs #630. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 P.knowlesi:164

H3ANG1              	100.00%		B3L341              	100.00%
H3AUP4              	64.54%		
Bootstrap support for H3ANG1 as seed ortholog is 100%.
Bootstrap support for B3L341 as seed ortholog is 100%.

Group of orthologs #631. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 P.knowlesi:164

H3B6V8              	100.00%		B3LC58              	100.00%
                    	       		B3L7H4              	18.42%
Bootstrap support for H3B6V8 as seed ortholog is 100%.
Bootstrap support for B3LC58 as seed ortholog is 100%.

Group of orthologs #632. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.knowlesi:164

H3AJB8              	100.00%		B3L543              	100.00%
Bootstrap support for H3AJB8 as seed ortholog is 100%.
Bootstrap support for B3L543 as seed ortholog is 100%.

Group of orthologs #633. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 P.knowlesi:164

H3AL71              	100.00%		B3LBG3              	100.00%
Bootstrap support for H3AL71 as seed ortholog is 100%.
Bootstrap support for B3LBG3 as seed ortholog is 100%.

Group of orthologs #634. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.knowlesi:81

H3AH13              	100.00%		B3L3A0              	100.00%
H3B907              	62.93%		
H2ZUG3              	37.07%		
Bootstrap support for H3AH13 as seed ortholog is 94%.
Bootstrap support for B3L3A0 as seed ortholog is 99%.

Group of orthologs #635. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.knowlesi:163

H3ABC3              	100.00%		B3L9P0              	100.00%
H3AZN1              	7.76%		
H2ZXS0              	6.55%		
Bootstrap support for H3ABC3 as seed ortholog is 75%.
Bootstrap support for B3L9P0 as seed ortholog is 100%.

Group of orthologs #636. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 P.knowlesi:163

M3XHU7              	100.00%		B3L7U8              	100.00%
H3AYY5              	48.01%		
Bootstrap support for M3XHU7 as seed ortholog is 100%.
Bootstrap support for B3L7U8 as seed ortholog is 100%.

Group of orthologs #637. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 P.knowlesi:163

H3A4A4              	100.00%		B3L5Y1              	100.00%
Bootstrap support for H3A4A4 as seed ortholog is 100%.
Bootstrap support for B3L5Y1 as seed ortholog is 100%.

Group of orthologs #638. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 P.knowlesi:163

H3AJK3              	100.00%		B3L7U7              	100.00%
Bootstrap support for H3AJK3 as seed ortholog is 100%.
Bootstrap support for B3L7U7 as seed ortholog is 100%.

Group of orthologs #639. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.knowlesi:163

H3ASH3              	100.00%		B3L166              	100.00%
Bootstrap support for H3ASH3 as seed ortholog is 99%.
Bootstrap support for B3L166 as seed ortholog is 100%.

Group of orthologs #640. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.knowlesi:163

H3AMK7              	100.00%		B3L6K3              	100.00%
Bootstrap support for H3AMK7 as seed ortholog is 93%.
Bootstrap support for B3L6K3 as seed ortholog is 100%.

Group of orthologs #641. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 P.knowlesi:163

H3B3Z3              	100.00%		B3L2Y1              	100.00%
Bootstrap support for H3B3Z3 as seed ortholog is 100%.
Bootstrap support for B3L2Y1 as seed ortholog is 100%.

Group of orthologs #642. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 P.knowlesi:162

H2ZS14              	100.00%		B3LA44              	100.00%
H3A3V5              	29.67%		
Bootstrap support for H2ZS14 as seed ortholog is 100%.
Bootstrap support for B3LA44 as seed ortholog is 100%.

Group of orthologs #643. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 P.knowlesi:162

H3AEZ7              	100.00%		B3L9M4              	100.00%
Bootstrap support for H3AEZ7 as seed ortholog is 100%.
Bootstrap support for B3L9M4 as seed ortholog is 100%.

Group of orthologs #644. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 P.knowlesi:162

H3B9D0              	100.00%		B3LD68              	100.00%
Bootstrap support for H3B9D0 as seed ortholog is 100%.
Bootstrap support for B3LD68 as seed ortholog is 100%.

Group of orthologs #645. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.knowlesi:161

M3XJB9              	100.00%		B3LDC6              	100.00%
H3AEG5              	11.95%		
H3ACW5              	7.74%		
H3BF52              	7.30%		
Bootstrap support for M3XJB9 as seed ortholog is 95%.
Bootstrap support for B3LDC6 as seed ortholog is 100%.

Group of orthologs #646. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.knowlesi:161

H3AJZ8              	100.00%		B3L242              	100.00%
Bootstrap support for H3AJZ8 as seed ortholog is 100%.
Bootstrap support for B3L242 as seed ortholog is 100%.

Group of orthologs #647. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:17 P.knowlesi:161

H3APP7              	100.00%		B3L2P6              	100.00%
Bootstrap support for H3APP7 as seed ortholog is 70%.
Alternative seed ortholog is H3AXS7 (17 bits away from this cluster)
Bootstrap support for B3L2P6 as seed ortholog is 100%.

Group of orthologs #648. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.knowlesi:161

H3AP59              	100.00%		B3L3P6              	100.00%
Bootstrap support for H3AP59 as seed ortholog is 100%.
Bootstrap support for B3L3P6 as seed ortholog is 100%.

Group of orthologs #649. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.knowlesi:161

H3B1Y6              	100.00%		B3L1D6              	100.00%
Bootstrap support for H3B1Y6 as seed ortholog is 100%.
Bootstrap support for B3L1D6 as seed ortholog is 100%.

Group of orthologs #650. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.knowlesi:161

H3B0Y4              	100.00%		B3L349              	100.00%
Bootstrap support for H3B0Y4 as seed ortholog is 100%.
Bootstrap support for B3L349 as seed ortholog is 100%.

Group of orthologs #651. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:27 P.knowlesi:59

H3B157              	100.00%		B3L761              	100.00%
Bootstrap support for H3B157 as seed ortholog is 87%.
Bootstrap support for B3L761 as seed ortholog is 99%.

Group of orthologs #652. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.knowlesi:161

H3AZA0              	100.00%		B3L9X9              	100.00%
Bootstrap support for H3AZA0 as seed ortholog is 100%.
Bootstrap support for B3L9X9 as seed ortholog is 100%.

Group of orthologs #653. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.knowlesi:161

H3B8A6              	100.00%		B3L303              	100.00%
Bootstrap support for H3B8A6 as seed ortholog is 100%.
Bootstrap support for B3L303 as seed ortholog is 100%.

Group of orthologs #654. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.knowlesi:160

H3AG26              	100.00%		B3L470              	100.00%
H3A097              	96.12%		
H3BG90              	87.60%		
Bootstrap support for H3AG26 as seed ortholog is 100%.
Bootstrap support for B3L470 as seed ortholog is 100%.

Group of orthologs #655. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.knowlesi:12

H3BE43              	100.00%		B3L324              	100.00%
H3AFC4              	33.09%		
Bootstrap support for H3BE43 as seed ortholog is 100%.
Bootstrap support for B3L324 as seed ortholog is 67%.
Alternative seed ortholog is B3LBN1 (12 bits away from this cluster)

Group of orthologs #656. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.knowlesi:160

H2ZZS9              	100.00%		B3LCK5              	100.00%
Bootstrap support for H2ZZS9 as seed ortholog is 100%.
Bootstrap support for B3LCK5 as seed ortholog is 100%.

Group of orthologs #657. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:29 P.knowlesi:160

H3ALF6              	100.00%		B3L4T4              	100.00%
Bootstrap support for H3ALF6 as seed ortholog is 78%.
Bootstrap support for B3L4T4 as seed ortholog is 100%.

Group of orthologs #658. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.knowlesi:160

H3AXJ9              	100.00%		B3L7I7              	100.00%
Bootstrap support for H3AXJ9 as seed ortholog is 100%.
Bootstrap support for B3L7I7 as seed ortholog is 100%.

Group of orthologs #659. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.knowlesi:160

H3B1G7              	100.00%		B3LB63              	100.00%
Bootstrap support for H3B1G7 as seed ortholog is 100%.
Bootstrap support for B3LB63 as seed ortholog is 100%.

Group of orthologs #660. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 P.knowlesi:159

H3A140              	100.00%		B3KZL3              	100.00%
H3A948              	52.60%		
Bootstrap support for H3A140 as seed ortholog is 100%.
Bootstrap support for B3KZL3 as seed ortholog is 100%.

Group of orthologs #661. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 P.knowlesi:159

H3AU78              	100.00%		B3L362              	100.00%
H3B227              	43.56%		
Bootstrap support for H3AU78 as seed ortholog is 100%.
Bootstrap support for B3L362 as seed ortholog is 100%.

Group of orthologs #662. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 P.knowlesi:159

M3XK17              	100.00%		B3KZ34              	100.00%
H3A264              	17.01%		
Bootstrap support for M3XK17 as seed ortholog is 100%.
Bootstrap support for B3KZ34 as seed ortholog is 100%.

Group of orthologs #663. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 P.knowlesi:158

H3AMA5              	100.00%		B3L9G8              	100.00%
H3A7M7              	6.96%		
Bootstrap support for H3AMA5 as seed ortholog is 100%.
Bootstrap support for B3L9G8 as seed ortholog is 100%.

Group of orthologs #664. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.knowlesi:158

H3B516              	100.00%		B3LB24              	100.00%
H2ZYR2              	50.59%		
Bootstrap support for H3B516 as seed ortholog is 99%.
Bootstrap support for B3LB24 as seed ortholog is 100%.

Group of orthologs #665. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.knowlesi:158

H3A6G6              	100.00%		B3KZJ5              	100.00%
Bootstrap support for H3A6G6 as seed ortholog is 99%.
Bootstrap support for B3KZJ5 as seed ortholog is 100%.

Group of orthologs #666. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 P.knowlesi:158

H3A597              	100.00%		B3LBI7              	100.00%
Bootstrap support for H3A597 as seed ortholog is 100%.
Bootstrap support for B3LBI7 as seed ortholog is 100%.

Group of orthologs #667. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 P.knowlesi:158

H3AZ57              	100.00%		B3KZH6              	100.00%
Bootstrap support for H3AZ57 as seed ortholog is 100%.
Bootstrap support for B3KZH6 as seed ortholog is 100%.

Group of orthologs #668. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 P.knowlesi:158

H3BEE4              	100.00%		B3L376              	100.00%
Bootstrap support for H3BEE4 as seed ortholog is 100%.
Bootstrap support for B3L376 as seed ortholog is 100%.

Group of orthologs #669. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.knowlesi:108

H3BFR6              	100.00%		B3LCD2              	100.00%
Bootstrap support for H3BFR6 as seed ortholog is 100%.
Bootstrap support for B3LCD2 as seed ortholog is 100%.

Group of orthologs #670. Best score 157 bits
Score difference with first non-orthologous sequence - L.chalumnae:25 P.knowlesi:157

H3B3N8              	100.00%		B3LAK3              	100.00%
H3B216              	69.71%		
Bootstrap support for H3B3N8 as seed ortholog is 77%.
Bootstrap support for B3LAK3 as seed ortholog is 100%.

Group of orthologs #671. Best score 157 bits
Score difference with first non-orthologous sequence - L.chalumnae:157 P.knowlesi:157

H3ARG3              	100.00%		B3L549              	100.00%
Bootstrap support for H3ARG3 as seed ortholog is 100%.
Bootstrap support for B3L549 as seed ortholog is 100%.

Group of orthologs #672. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:32 P.knowlesi:156

H3A5E7              	100.00%		B3LC36              	100.00%
H3AQ34              	29.90%		
Bootstrap support for H3A5E7 as seed ortholog is 97%.
Bootstrap support for B3LC36 as seed ortholog is 100%.

Group of orthologs #673. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.knowlesi:156

H3AJE5              	100.00%		B3L745              	100.00%
Bootstrap support for H3AJE5 as seed ortholog is 100%.
Bootstrap support for B3L745 as seed ortholog is 100%.

Group of orthologs #674. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.knowlesi:156

H3AS92              	100.00%		B3L8M1              	100.00%
Bootstrap support for H3AS92 as seed ortholog is 100%.
Bootstrap support for B3L8M1 as seed ortholog is 100%.

Group of orthologs #675. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.knowlesi:156

H3B6W2              	100.00%		B3L032              	100.00%
Bootstrap support for H3B6W2 as seed ortholog is 100%.
Bootstrap support for B3L032 as seed ortholog is 100%.

Group of orthologs #676. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:39 P.knowlesi:155

H2ZS39              	100.00%		B3L4K3              	100.00%
H3A427              	75.45%		
H2ZZP4              	70.91%		
H3A2S8              	64.55%		
H3A485              	60.00%		
Bootstrap support for H2ZS39 as seed ortholog is 96%.
Bootstrap support for B3L4K3 as seed ortholog is 100%.

Group of orthologs #677. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.knowlesi:155

H3AS71              	100.00%		B3KZA0              	100.00%
H3AXQ7              	100.00%		
H3B129              	73.58%		
Bootstrap support for H3AS71 as seed ortholog is 99%.
Bootstrap support for H3AXQ7 as seed ortholog is 99%.
Bootstrap support for B3KZA0 as seed ortholog is 100%.

Group of orthologs #678. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 P.knowlesi:155

H3AH88              	100.00%		B3L1J7              	100.00%
H3AYR4              	19.58%		
Bootstrap support for H3AH88 as seed ortholog is 100%.
Bootstrap support for B3L1J7 as seed ortholog is 100%.

Group of orthologs #679. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 P.knowlesi:155

H3A2Z0              	100.00%		B3L4C5              	100.00%
Bootstrap support for H3A2Z0 as seed ortholog is 100%.
Bootstrap support for B3L4C5 as seed ortholog is 100%.

Group of orthologs #680. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 P.knowlesi:155

H3A519              	100.00%		B3L3G6              	100.00%
Bootstrap support for H3A519 as seed ortholog is 100%.
Bootstrap support for B3L3G6 as seed ortholog is 100%.

Group of orthologs #681. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 P.knowlesi:155

H3AHF7              	100.00%		B3L6W7              	100.00%
Bootstrap support for H3AHF7 as seed ortholog is 100%.
Bootstrap support for B3L6W7 as seed ortholog is 100%.

Group of orthologs #682. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 P.knowlesi:155

H3AJT2              	100.00%		B3LBS5              	100.00%
Bootstrap support for H3AJT2 as seed ortholog is 100%.
Bootstrap support for B3LBS5 as seed ortholog is 100%.

Group of orthologs #683. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.knowlesi:155

H3B673              	100.00%		B3L4W6              	100.00%
Bootstrap support for H3B673 as seed ortholog is 93%.
Bootstrap support for B3L4W6 as seed ortholog is 100%.

Group of orthologs #684. Best score 154 bits
Score difference with first non-orthologous sequence - L.chalumnae:154 P.knowlesi:154

H3AGS7              	100.00%		B3L4C4              	100.00%
H3B840              	46.67%		
H2ZWX7              	42.67%		
Bootstrap support for H3AGS7 as seed ortholog is 100%.
Bootstrap support for B3L4C4 as seed ortholog is 100%.

Group of orthologs #685. Best score 154 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.knowlesi:154

H3AL25              	100.00%		B3L291              	100.00%
Bootstrap support for H3AL25 as seed ortholog is 93%.
Bootstrap support for B3L291 as seed ortholog is 100%.

Group of orthologs #686. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.knowlesi:16

H2ZW77              	100.00%		B3LDB9              	100.00%
H3B0U5              	48.83%		B3L4X0              	13.54%
Bootstrap support for H2ZW77 as seed ortholog is 88%.
Bootstrap support for B3LDB9 as seed ortholog is 67%.
Alternative seed ortholog is B3KZX7 (16 bits away from this cluster)

Group of orthologs #687. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.knowlesi:153

H2ZVH4              	100.00%		B3L2R8              	100.00%
Bootstrap support for H2ZVH4 as seed ortholog is 100%.
Bootstrap support for B3L2R8 as seed ortholog is 100%.

Group of orthologs #688. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.knowlesi:153

H3A4V6              	100.00%		B3KZA9              	100.00%
Bootstrap support for H3A4V6 as seed ortholog is 100%.
Bootstrap support for B3KZA9 as seed ortholog is 100%.

Group of orthologs #689. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.knowlesi:153

H3AVR8              	100.00%		B3L1U4              	100.00%
Bootstrap support for H3AVR8 as seed ortholog is 100%.
Bootstrap support for B3L1U4 as seed ortholog is 100%.

Group of orthologs #690. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.knowlesi:153

H3AYC2              	100.00%		B3L7G9              	100.00%
Bootstrap support for H3AYC2 as seed ortholog is 100%.
Bootstrap support for B3L7G9 as seed ortholog is 100%.

Group of orthologs #691. Best score 152 bits
Score difference with first non-orthologous sequence - L.chalumnae:152 P.knowlesi:152

H3ADQ1              	100.00%		B3L1E5              	100.00%
Bootstrap support for H3ADQ1 as seed ortholog is 100%.
Bootstrap support for B3L1E5 as seed ortholog is 100%.

Group of orthologs #692. Best score 152 bits
Score difference with first non-orthologous sequence - L.chalumnae:152 P.knowlesi:152

H3A9A6              	100.00%		B3L783              	100.00%
Bootstrap support for H3A9A6 as seed ortholog is 100%.
Bootstrap support for B3L783 as seed ortholog is 100%.

Group of orthologs #693. Best score 152 bits
Score difference with first non-orthologous sequence - L.chalumnae:152 P.knowlesi:152

H3APE0              	100.00%		B3KZQ6              	100.00%
Bootstrap support for H3APE0 as seed ortholog is 100%.
Bootstrap support for B3KZQ6 as seed ortholog is 100%.

Group of orthologs #694. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.knowlesi:151

H3B7E7              	100.00%		B3LA04              	100.00%
H3B2B3              	56.35%		
H3BFD6              	11.79%		
H3AAF1              	11.14%		
H3BGN6              	10.56%		
Bootstrap support for H3B7E7 as seed ortholog is 100%.
Bootstrap support for B3LA04 as seed ortholog is 100%.

Group of orthologs #695. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:16 P.knowlesi:151

H3AZI0              	100.00%		B3L1H1              	100.00%
H3BA39              	59.75%		
H2ZT47              	37.18%		
H3ASG5              	8.22%		
Bootstrap support for H3AZI0 as seed ortholog is 87%.
Bootstrap support for B3L1H1 as seed ortholog is 100%.

Group of orthologs #696. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:19 P.knowlesi:151

H2ZTJ3              	100.00%		B3L4U3              	100.00%
Bootstrap support for H2ZTJ3 as seed ortholog is 71%.
Alternative seed ortholog is H3B1A6 (19 bits away from this cluster)
Bootstrap support for B3L4U3 as seed ortholog is 100%.

Group of orthologs #697. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.knowlesi:151

H2ZSR8              	100.00%		B3LAX1              	100.00%
Bootstrap support for H2ZSR8 as seed ortholog is 100%.
Bootstrap support for B3LAX1 as seed ortholog is 100%.

Group of orthologs #698. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.knowlesi:151

H3ANP9              	100.00%		B3L398              	100.00%
Bootstrap support for H3ANP9 as seed ortholog is 100%.
Bootstrap support for B3L398 as seed ortholog is 100%.

Group of orthologs #699. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.knowlesi:151

H3ANN4              	100.00%		B3L4R3              	100.00%
Bootstrap support for H3ANN4 as seed ortholog is 100%.
Bootstrap support for B3L4R3 as seed ortholog is 100%.

Group of orthologs #700. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.knowlesi:50

H3AX79              	100.00%		B3L3J7              	100.00%
Bootstrap support for H3AX79 as seed ortholog is 99%.
Bootstrap support for B3L3J7 as seed ortholog is 99%.

Group of orthologs #701. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.knowlesi:151

H3B5U5              	100.00%		B3L4N3              	100.00%
Bootstrap support for H3B5U5 as seed ortholog is 100%.
Bootstrap support for B3L4N3 as seed ortholog is 100%.

Group of orthologs #702. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 P.knowlesi:151

H3BFR2              	100.00%		B3L6S2              	100.00%
Bootstrap support for H3BFR2 as seed ortholog is 99%.
Bootstrap support for B3L6S2 as seed ortholog is 100%.

Group of orthologs #703. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.knowlesi:150

M3XJI1              	100.00%		B3KZ86              	100.00%
H3AR07              	14.23%		
H3AWE0              	5.03%		
Bootstrap support for M3XJI1 as seed ortholog is 100%.
Bootstrap support for B3KZ86 as seed ortholog is 100%.

Group of orthologs #704. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.knowlesi:150

H2ZXR2              	100.00%		B3LBK2              	100.00%
Bootstrap support for H2ZXR2 as seed ortholog is 100%.
Bootstrap support for B3LBK2 as seed ortholog is 100%.

Group of orthologs #705. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.knowlesi:150

H3B4H6              	100.00%		B3L488              	100.00%
Bootstrap support for H3B4H6 as seed ortholog is 100%.
Bootstrap support for B3L488 as seed ortholog is 100%.

Group of orthologs #706. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.knowlesi:150

H3BDT5              	100.00%		B3L6Q5              	100.00%
Bootstrap support for H3BDT5 as seed ortholog is 100%.
Bootstrap support for B3L6Q5 as seed ortholog is 100%.

Group of orthologs #707. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.knowlesi:149

H3ABQ7              	100.00%		B3L181              	100.00%
H3BD55              	55.60%		
H3A790              	54.67%		
Bootstrap support for H3ABQ7 as seed ortholog is 99%.
Bootstrap support for B3L181 as seed ortholog is 100%.

Group of orthologs #708. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.knowlesi:67

H2ZWU0              	100.00%		B3L5C8              	100.00%
H3AQH1              	62.06%		
Bootstrap support for H2ZWU0 as seed ortholog is 100%.
Bootstrap support for B3L5C8 as seed ortholog is 99%.

Group of orthologs #709. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.knowlesi:149

H3APH1              	100.00%		B3L8G7              	100.00%
Bootstrap support for H3APH1 as seed ortholog is 100%.
Bootstrap support for B3L8G7 as seed ortholog is 100%.

Group of orthologs #710. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.knowlesi:149

H3B715              	100.00%		B3KZ67              	100.00%
Bootstrap support for H3B715 as seed ortholog is 100%.
Bootstrap support for B3KZ67 as seed ortholog is 100%.

Group of orthologs #711. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.knowlesi:149

H3BCS7              	100.00%		B3L4F6              	100.00%
Bootstrap support for H3BCS7 as seed ortholog is 100%.
Bootstrap support for B3L4F6 as seed ortholog is 100%.

Group of orthologs #712. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.knowlesi:148

H3AGB8              	100.00%		B3L444              	100.00%
H2ZVX0              	35.21%		
Bootstrap support for H3AGB8 as seed ortholog is 100%.
Bootstrap support for B3L444 as seed ortholog is 100%.

Group of orthologs #713. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.knowlesi:148

H3AU64              	100.00%		B3L6H3              	100.00%
                    	       		B3L0N7              	13.95%
Bootstrap support for H3AU64 as seed ortholog is 100%.
Bootstrap support for B3L6H3 as seed ortholog is 100%.

Group of orthologs #714. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.knowlesi:24

H3A968              	100.00%		B3LAH3              	100.00%
Bootstrap support for H3A968 as seed ortholog is 100%.
Bootstrap support for B3LAH3 as seed ortholog is 95%.

Group of orthologs #715. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.knowlesi:148

H3ARW6              	100.00%		B3L2W0              	100.00%
Bootstrap support for H3ARW6 as seed ortholog is 99%.
Bootstrap support for B3L2W0 as seed ortholog is 100%.

Group of orthologs #716. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.knowlesi:148

H3BFN3              	100.00%		B3L3R0              	100.00%
Bootstrap support for H3BFN3 as seed ortholog is 100%.
Bootstrap support for B3L3R0 as seed ortholog is 100%.

Group of orthologs #717. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.knowlesi:148

H3BEJ6              	100.00%		B3L672              	100.00%
Bootstrap support for H3BEJ6 as seed ortholog is 100%.
Bootstrap support for B3L672 as seed ortholog is 100%.

Group of orthologs #718. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:147 P.knowlesi:147

H3B527              	100.00%		B3L3Q7              	100.00%
H3BFX5              	34.55%		
H3A328              	33.88%		
Bootstrap support for H3B527 as seed ortholog is 100%.
Bootstrap support for B3L3Q7 as seed ortholog is 100%.

Group of orthologs #719. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:18 P.knowlesi:147

M3XJ11              	100.00%		B3L5S0              	100.00%
H3B8Z8              	25.20%		
H3A6Z8              	5.70%		
Bootstrap support for M3XJ11 as seed ortholog is 61%.
Alternative seed ortholog is H3BDF6 (18 bits away from this cluster)
Bootstrap support for B3L5S0 as seed ortholog is 100%.

Group of orthologs #720. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.knowlesi:86

H3A7T4              	100.00%		B3L418              	100.00%
Bootstrap support for H3A7T4 as seed ortholog is 98%.
Bootstrap support for B3L418 as seed ortholog is 99%.

Group of orthologs #721. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:147 P.knowlesi:147

H3ATQ3              	100.00%		B3L443              	100.00%
Bootstrap support for H3ATQ3 as seed ortholog is 100%.
Bootstrap support for B3L443 as seed ortholog is 100%.

Group of orthologs #722. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:147 P.knowlesi:43

H3AIQ9              	100.00%		B3LCN5              	100.00%
Bootstrap support for H3AIQ9 as seed ortholog is 100%.
Bootstrap support for B3LCN5 as seed ortholog is 89%.

Group of orthologs #723. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:147 P.knowlesi:147

H3B3S2              	100.00%		B3LDA8              	100.00%
Bootstrap support for H3B3S2 as seed ortholog is 100%.
Bootstrap support for B3LDA8 as seed ortholog is 100%.

Group of orthologs #724. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:147 P.knowlesi:147

H3BEH5              	100.00%		B3L4M9              	100.00%
Bootstrap support for H3BEH5 as seed ortholog is 100%.
Bootstrap support for B3L4M9 as seed ortholog is 100%.

Group of orthologs #725. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:17 P.knowlesi:30

H3BAS6              	100.00%		B3LBW6              	100.00%
H3BDB6              	100.00%		
H2ZU03              	35.17%		
H3A2S9              	9.85%		
H3APG1              	5.54%		
Bootstrap support for H3BAS6 as seed ortholog is 67%.
Alternative seed ortholog is H2ZYE7 (17 bits away from this cluster)
Bootstrap support for H3BDB6 as seed ortholog is 67%.
Alternative seed ortholog is H2ZYE7 (17 bits away from this cluster)
Bootstrap support for B3LBW6 as seed ortholog is 78%.

Group of orthologs #726. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.knowlesi:146

H3A7Z4              	100.00%		B3L6K8              	100.00%
H3BIE1              	55.16%		
Bootstrap support for H3A7Z4 as seed ortholog is 100%.
Bootstrap support for B3L6K8 as seed ortholog is 100%.

Group of orthologs #727. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.knowlesi:146

H3B878              	100.00%		B3L2S4              	100.00%
Bootstrap support for H3B878 as seed ortholog is 100%.
Bootstrap support for B3L2S4 as seed ortholog is 100%.

Group of orthologs #728. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.knowlesi:98

H3B2Y9              	100.00%		B3LCN8              	100.00%
Bootstrap support for H3B2Y9 as seed ortholog is 100%.
Bootstrap support for B3LCN8 as seed ortholog is 100%.

Group of orthologs #729. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.knowlesi:146

M3XKA9              	100.00%		B3L747              	100.00%
Bootstrap support for M3XKA9 as seed ortholog is 100%.
Bootstrap support for B3L747 as seed ortholog is 100%.

Group of orthologs #730. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.knowlesi:146

H3BIJ9              	100.00%		B3LCV4              	100.00%
Bootstrap support for H3BIJ9 as seed ortholog is 100%.
Bootstrap support for B3LCV4 as seed ortholog is 100%.

Group of orthologs #731. Best score 145 bits
Score difference with first non-orthologous sequence - L.chalumnae:145 P.knowlesi:145

H3B661              	100.00%		B3KZI4              	100.00%
H3A738              	54.72%		
Bootstrap support for H3B661 as seed ortholog is 100%.
Bootstrap support for B3KZI4 as seed ortholog is 100%.

Group of orthologs #732. Best score 145 bits
Score difference with first non-orthologous sequence - L.chalumnae:145 P.knowlesi:145

H3BAS9              	100.00%		B3LA15              	100.00%
Bootstrap support for H3BAS9 as seed ortholog is 100%.
Bootstrap support for B3LA15 as seed ortholog is 100%.

Group of orthologs #733. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.knowlesi:72

H3A836              	100.00%		B3LAW9              	100.00%
H2ZV61              	54.67%		
Bootstrap support for H3A836 as seed ortholog is 100%.
Bootstrap support for B3LAW9 as seed ortholog is 99%.

Group of orthologs #734. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.knowlesi:144

H3AD65              	100.00%		B3LAJ5              	100.00%
                    	       		B3LA84              	53.51%
Bootstrap support for H3AD65 as seed ortholog is 100%.
Bootstrap support for B3LAJ5 as seed ortholog is 100%.

Group of orthologs #735. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.knowlesi:144

H3BDP2              	100.00%		B3KZ07              	100.00%
H3A4X6              	60.80%		
Bootstrap support for H3BDP2 as seed ortholog is 100%.
Bootstrap support for B3KZ07 as seed ortholog is 100%.

Group of orthologs #736. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.knowlesi:144

H2ZZG3              	100.00%		B3L8R3              	100.00%
Bootstrap support for H2ZZG3 as seed ortholog is 100%.
Bootstrap support for B3L8R3 as seed ortholog is 100%.

Group of orthologs #737. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.knowlesi:144

H3ADS7              	100.00%		B3L410              	100.00%
Bootstrap support for H3ADS7 as seed ortholog is 100%.
Bootstrap support for B3L410 as seed ortholog is 100%.

Group of orthologs #738. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.knowlesi:144

H3BE16              	100.00%		B3L1F3              	100.00%
Bootstrap support for H3BE16 as seed ortholog is 100%.
Bootstrap support for B3L1F3 as seed ortholog is 100%.

Group of orthologs #739. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.knowlesi:143

H3AXM0              	100.00%		B3L7E6              	100.00%
H3B270              	29.35%		
H2ZXJ7              	28.09%		
H3A5P5              	27.04%		
H3BEA6              	24.32%		
H3AJ74              	22.64%		
H2ZSJ0              	13.84%		
M3XI98              	8.81%		
Bootstrap support for H3AXM0 as seed ortholog is 97%.
Bootstrap support for B3L7E6 as seed ortholog is 100%.

Group of orthologs #740. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:38 P.knowlesi:143

H3AFR4              	100.00%		B3LDB6              	100.00%
H3BAW5              	42.75%		
Bootstrap support for H3AFR4 as seed ortholog is 87%.
Bootstrap support for B3LDB6 as seed ortholog is 100%.

Group of orthologs #741. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 P.knowlesi:143

H3ATA4              	100.00%		B3L9G0              	100.00%
H3ATK9              	26.79%		
Bootstrap support for H3ATA4 as seed ortholog is 100%.
Bootstrap support for B3L9G0 as seed ortholog is 100%.

Group of orthologs #742. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 P.knowlesi:143

H3A242              	100.00%		B3LDF8              	100.00%
Bootstrap support for H3A242 as seed ortholog is 100%.
Bootstrap support for B3LDF8 as seed ortholog is 100%.

Group of orthologs #743. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 P.knowlesi:143

H3B245              	100.00%		B3L6Y9              	100.00%
Bootstrap support for H3B245 as seed ortholog is 100%.
Bootstrap support for B3L6Y9 as seed ortholog is 100%.

Group of orthologs #744. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 P.knowlesi:143

H3B6V2              	100.00%		B3LBG9              	100.00%
Bootstrap support for H3B6V2 as seed ortholog is 100%.
Bootstrap support for B3LBG9 as seed ortholog is 100%.

Group of orthologs #745. Best score 142 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.knowlesi:142

H3A6A2              	100.00%		B3L947              	100.00%
Bootstrap support for H3A6A2 as seed ortholog is 96%.
Bootstrap support for B3L947 as seed ortholog is 100%.

Group of orthologs #746. Best score 142 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.knowlesi:73

H3A2V5              	100.00%		B3LD56              	100.00%
Bootstrap support for H3A2V5 as seed ortholog is 98%.
Bootstrap support for B3LD56 as seed ortholog is 97%.

Group of orthologs #747. Best score 142 bits
Score difference with first non-orthologous sequence - L.chalumnae:142 P.knowlesi:142

H3AJW8              	100.00%		B3LAP4              	100.00%
Bootstrap support for H3AJW8 as seed ortholog is 100%.
Bootstrap support for B3LAP4 as seed ortholog is 100%.

Group of orthologs #748. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.knowlesi:141

H3AJ85              	100.00%		B3L8Y6              	100.00%
H3B830              	52.59%		B3L8Y3              	27.71%
H3AQL4              	51.72%		B3L7M3              	23.54%
H3AN81              	21.38%		
Bootstrap support for H3AJ85 as seed ortholog is 94%.
Bootstrap support for B3L8Y6 as seed ortholog is 100%.

Group of orthologs #749. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.knowlesi:141

H3BBP3              	100.00%		B3L1N7              	100.00%
H3A183              	20.33%		
M3XKG2              	15.35%		
H3AMG1              	15.15%		
Bootstrap support for H3BBP3 as seed ortholog is 98%.
Bootstrap support for B3L1N7 as seed ortholog is 100%.

Group of orthologs #750. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.knowlesi:141

H3AC41              	100.00%		B3LBG7              	100.00%
H3BCW9              	43.30%		
Bootstrap support for H3AC41 as seed ortholog is 99%.
Bootstrap support for B3LBG7 as seed ortholog is 100%.

Group of orthologs #751. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 P.knowlesi:141

H3AEL6              	100.00%		B3LBT9              	100.00%
Bootstrap support for H3AEL6 as seed ortholog is 100%.
Bootstrap support for B3LBT9 as seed ortholog is 100%.

Group of orthologs #752. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 P.knowlesi:40

M3XKK5              	100.00%		B3L238              	100.00%
Bootstrap support for M3XKK5 as seed ortholog is 100%.
Bootstrap support for B3L238 as seed ortholog is 87%.

Group of orthologs #753. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 P.knowlesi:141

H3BGM9              	100.00%		B3L7H3              	100.00%
Bootstrap support for H3BGM9 as seed ortholog is 100%.
Bootstrap support for B3L7H3 as seed ortholog is 100%.

Group of orthologs #754. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:29 P.knowlesi:140

H3AIF1              	100.00%		B3L9J5              	100.00%
Bootstrap support for H3AIF1 as seed ortholog is 73%.
Alternative seed ortholog is H3BEY2 (29 bits away from this cluster)
Bootstrap support for B3L9J5 as seed ortholog is 100%.

Group of orthologs #755. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.knowlesi:140

H3B3E1              	100.00%		B3L6M1              	100.00%
Bootstrap support for H3B3E1 as seed ortholog is 100%.
Bootstrap support for B3L6M1 as seed ortholog is 100%.

Group of orthologs #756. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.knowlesi:140

H3BAE2              	100.00%		B3L6U9              	100.00%
Bootstrap support for H3BAE2 as seed ortholog is 100%.
Bootstrap support for B3L6U9 as seed ortholog is 100%.

Group of orthologs #757. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.knowlesi:140

H3BBW9              	100.00%		B3LBT5              	100.00%
Bootstrap support for H3BBW9 as seed ortholog is 100%.
Bootstrap support for B3LBT5 as seed ortholog is 100%.

Group of orthologs #758. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.knowlesi:139

H3AQF2              	100.00%		B3L550              	100.00%
H3ADH0              	48.59%		
Bootstrap support for H3AQF2 as seed ortholog is 100%.
Bootstrap support for B3L550 as seed ortholog is 100%.

Group of orthologs #759. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.knowlesi:139

H3AL27              	100.00%		B3KZ28              	100.00%
Bootstrap support for H3AL27 as seed ortholog is 100%.
Bootstrap support for B3KZ28 as seed ortholog is 100%.

Group of orthologs #760. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:26 P.knowlesi:139

H3AYU6              	100.00%		B3KYX5              	100.00%
Bootstrap support for H3AYU6 as seed ortholog is 84%.
Bootstrap support for B3KYX5 as seed ortholog is 100%.

Group of orthologs #761. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.knowlesi:139

H3B1E1              	100.00%		B3L0Z8              	100.00%
Bootstrap support for H3B1E1 as seed ortholog is 100%.
Bootstrap support for B3L0Z8 as seed ortholog is 100%.

Group of orthologs #762. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.knowlesi:139

H3ARJ8              	100.00%		B3LBX3              	100.00%
Bootstrap support for H3ARJ8 as seed ortholog is 96%.
Bootstrap support for B3LBX3 as seed ortholog is 100%.

Group of orthologs #763. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.knowlesi:139

H3BIN1              	100.00%		B3L9G7              	100.00%
Bootstrap support for H3BIN1 as seed ortholog is 100%.
Bootstrap support for B3L9G7 as seed ortholog is 100%.

Group of orthologs #764. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.knowlesi:138

H3AAY5              	100.00%		B3LB80              	100.00%
M3XJR9              	21.57%		
H3ARW5              	21.05%		
H2ZSS0              	20.09%		
H3A372              	18.69%		
H3ATK1              	17.99%		
H3AGP2              	17.73%		
M3XKG1              	16.68%		
M3XHS9              	15.46%		
H2ZVA4              	15.46%		
H3A228              	12.58%		
H3AMT8              	12.58%		
H2ZUC7              	12.49%		
M3XKP1              	12.14%		
H3ALA8              	9.34%		
H3B846              	8.47%		
H3AK65              	6.55%		
H3BCH6              	6.38%		
H3AAC3              	5.50%		
H2ZZC8              	5.07%		
Bootstrap support for H3AAY5 as seed ortholog is 89%.
Bootstrap support for B3LB80 as seed ortholog is 100%.

Group of orthologs #765. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.knowlesi:138

H2ZVQ1              	100.00%		B3LBE7              	100.00%
Bootstrap support for H2ZVQ1 as seed ortholog is 100%.
Bootstrap support for B3LBE7 as seed ortholog is 100%.

Group of orthologs #766. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.knowlesi:138

H3A8K9              	100.00%		B3LCE1              	100.00%
Bootstrap support for H3A8K9 as seed ortholog is 99%.
Bootstrap support for B3LCE1 as seed ortholog is 100%.

Group of orthologs #767. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.knowlesi:138

H3ACR5              	100.00%		B3L994              	100.00%
Bootstrap support for H3ACR5 as seed ortholog is 100%.
Bootstrap support for B3L994 as seed ortholog is 100%.

Group of orthologs #768. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.knowlesi:138

H3AS40              	100.00%		B3L7Y2              	100.00%
Bootstrap support for H3AS40 as seed ortholog is 100%.
Bootstrap support for B3L7Y2 as seed ortholog is 100%.

Group of orthologs #769. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.knowlesi:138

H3AXN5              	100.00%		B3LAD1              	100.00%
Bootstrap support for H3AXN5 as seed ortholog is 100%.
Bootstrap support for B3LAD1 as seed ortholog is 100%.

Group of orthologs #770. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.knowlesi:138

H3BBK5              	100.00%		B3LBM7              	100.00%
Bootstrap support for H3BBK5 as seed ortholog is 100%.
Bootstrap support for B3LBM7 as seed ortholog is 100%.

Group of orthologs #771. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 P.knowlesi:137

H3B6U6              	100.00%		B3L474              	100.00%
Bootstrap support for H3B6U6 as seed ortholog is 100%.
Bootstrap support for B3L474 as seed ortholog is 100%.

Group of orthologs #772. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.knowlesi:136

H2ZUR1              	100.00%		B3L5D6              	100.00%
M3XHS6              	39.65%		
H3A425              	31.72%		
Bootstrap support for H2ZUR1 as seed ortholog is 97%.
Bootstrap support for B3L5D6 as seed ortholog is 100%.

Group of orthologs #773. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.knowlesi:82

H3AB75              	100.00%		B3L085              	100.00%
H3AE82              	42.50%		
M3XI70              	36.48%		
Bootstrap support for H3AB75 as seed ortholog is 100%.
Bootstrap support for B3L085 as seed ortholog is 98%.

Group of orthologs #774. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.knowlesi:15

H3ABM0              	100.00%		B3L5X9              	100.00%
H3AQ09              	44.56%		B3L241              	7.30%
Bootstrap support for H3ABM0 as seed ortholog is 87%.
Bootstrap support for B3L5X9 as seed ortholog is 64%.
Alternative seed ortholog is B3L7V6 (15 bits away from this cluster)

Group of orthologs #775. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.knowlesi:45

H3AIN3              	100.00%		B3LC27              	100.00%
H3B920              	32.81%		
H3B259              	15.62%		
Bootstrap support for H3AIN3 as seed ortholog is 92%.
Bootstrap support for B3LC27 as seed ortholog is 89%.

Group of orthologs #776. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.knowlesi:136

H3A9D8              	100.00%		B3L608              	100.00%
H3ATU1              	12.99%		
Bootstrap support for H3A9D8 as seed ortholog is 100%.
Bootstrap support for B3L608 as seed ortholog is 100%.

Group of orthologs #777. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.knowlesi:136

H3AJ50              	100.00%		B3LAZ0              	100.00%
H3BGS1              	45.27%		
Bootstrap support for H3AJ50 as seed ortholog is 100%.
Bootstrap support for B3LAZ0 as seed ortholog is 100%.

Group of orthologs #778. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.knowlesi:32

H3BFP2              	100.00%		B3L973              	100.00%
H3ANF9              	50.14%		
Bootstrap support for H3BFP2 as seed ortholog is 100%.
Bootstrap support for B3L973 as seed ortholog is 88%.

Group of orthologs #779. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.knowlesi:136

H3A3E4              	100.00%		B3L2P7              	100.00%
Bootstrap support for H3A3E4 as seed ortholog is 100%.
Bootstrap support for B3L2P7 as seed ortholog is 100%.

Group of orthologs #780. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.knowlesi:136

H2ZXC2              	100.00%		B3L8X2              	100.00%
Bootstrap support for H2ZXC2 as seed ortholog is 100%.
Bootstrap support for B3L8X2 as seed ortholog is 100%.

Group of orthologs #781. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.knowlesi:136

H3AGA7              	100.00%		B3LAY3              	100.00%
Bootstrap support for H3AGA7 as seed ortholog is 100%.
Bootstrap support for B3LAY3 as seed ortholog is 100%.

Group of orthologs #782. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.knowlesi:136

H3AVH6              	100.00%		B3L0H5              	100.00%
Bootstrap support for H3AVH6 as seed ortholog is 100%.
Bootstrap support for B3L0H5 as seed ortholog is 100%.

Group of orthologs #783. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.knowlesi:136

H3BDF2              	100.00%		B3L1M2              	100.00%
Bootstrap support for H3BDF2 as seed ortholog is 100%.
Bootstrap support for B3L1M2 as seed ortholog is 100%.

Group of orthologs #784. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.knowlesi:135

H3AMX3              	100.00%		B3L544              	100.00%
H3BIM3              	45.35%		
Bootstrap support for H3AMX3 as seed ortholog is 100%.
Bootstrap support for B3L544 as seed ortholog is 100%.

Group of orthologs #785. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.knowlesi:135

H3AAY2              	100.00%		B3L319              	100.00%
Bootstrap support for H3AAY2 as seed ortholog is 100%.
Bootstrap support for B3L319 as seed ortholog is 100%.

Group of orthologs #786. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.knowlesi:135

H3AFR1              	100.00%		B3L692              	100.00%
Bootstrap support for H3AFR1 as seed ortholog is 100%.
Bootstrap support for B3L692 as seed ortholog is 100%.

Group of orthologs #787. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.knowlesi:135

H3AGN4              	100.00%		B3LBI9              	100.00%
Bootstrap support for H3AGN4 as seed ortholog is 100%.
Bootstrap support for B3LBI9 as seed ortholog is 100%.

Group of orthologs #788. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.knowlesi:135

H3AXX3              	100.00%		B3L4T6              	100.00%
Bootstrap support for H3AXX3 as seed ortholog is 100%.
Bootstrap support for B3L4T6 as seed ortholog is 100%.

Group of orthologs #789. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.knowlesi:135

H3B7Y2              	100.00%		B3L4M2              	100.00%
Bootstrap support for H3B7Y2 as seed ortholog is 100%.
Bootstrap support for B3L4M2 as seed ortholog is 100%.

Group of orthologs #790. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.knowlesi:135

H3BG00              	100.00%		B3L211              	100.00%
Bootstrap support for H3BG00 as seed ortholog is 91%.
Bootstrap support for B3L211 as seed ortholog is 100%.

Group of orthologs #791. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 P.knowlesi:134

H3B169              	100.00%		B3LC67              	100.00%
H2ZYV3              	36.52%		
H2ZTW7              	33.33%		
H3A6F5              	31.56%		
H3B4N0              	29.79%		
H3A8L1              	20.21%		
H2ZVP1              	16.31%		
Bootstrap support for H3B169 as seed ortholog is 100%.
Bootstrap support for B3LC67 as seed ortholog is 100%.

Group of orthologs #792. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 P.knowlesi:134

H3B001              	100.00%		B3L136              	100.00%
Bootstrap support for H3B001 as seed ortholog is 100%.
Bootstrap support for B3L136 as seed ortholog is 100%.

Group of orthologs #793. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 P.knowlesi:134

H3AYT9              	100.00%		B3LBW0              	100.00%
Bootstrap support for H3AYT9 as seed ortholog is 100%.
Bootstrap support for B3LBW0 as seed ortholog is 100%.

Group of orthologs #794. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.knowlesi:133

H3A8Y7              	100.00%		B3L5H7              	100.00%
H3BDI8              	42.08%		
H3AMT3              	38.82%		
Bootstrap support for H3A8Y7 as seed ortholog is 100%.
Bootstrap support for B3L5H7 as seed ortholog is 100%.

Group of orthologs #795. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.knowlesi:133

H3B7H7              	100.00%		B3L1D1              	100.00%
H3AX93              	45.67%		
H3AZZ9              	21.26%		
Bootstrap support for H3B7H7 as seed ortholog is 99%.
Bootstrap support for B3L1D1 as seed ortholog is 100%.

Group of orthologs #796. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.knowlesi:133

H3ARP2              	100.00%		B3KZB4              	100.00%
H3BHU5              	7.56%		
Bootstrap support for H3ARP2 as seed ortholog is 98%.
Bootstrap support for B3KZB4 as seed ortholog is 100%.

Group of orthologs #797. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.knowlesi:133

H3ARE2              	100.00%		B3L551              	100.00%
H3ABV3              	21.59%		
Bootstrap support for H3ARE2 as seed ortholog is 100%.
Bootstrap support for B3L551 as seed ortholog is 100%.

Group of orthologs #798. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.knowlesi:133

H3AC68              	100.00%		B3L236              	100.00%
Bootstrap support for H3AC68 as seed ortholog is 100%.
Bootstrap support for B3L236 as seed ortholog is 100%.

Group of orthologs #799. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.knowlesi:133

H3B677              	100.00%		B3LD50              	100.00%
Bootstrap support for H3B677 as seed ortholog is 100%.
Bootstrap support for B3LD50 as seed ortholog is 100%.

Group of orthologs #800. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.knowlesi:133

H3BF80              	100.00%		B3L835              	100.00%
Bootstrap support for H3BF80 as seed ortholog is 100%.
Bootstrap support for B3L835 as seed ortholog is 100%.

Group of orthologs #801. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.knowlesi:133

M3XHM2              	100.00%		B3L596              	100.00%
Bootstrap support for M3XHM2 as seed ortholog is 100%.
Bootstrap support for B3L596 as seed ortholog is 100%.

Group of orthologs #802. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 P.knowlesi:132

H3ACJ4              	100.00%		B3L4N5              	100.00%
Bootstrap support for H3ACJ4 as seed ortholog is 100%.
Bootstrap support for B3L4N5 as seed ortholog is 100%.

Group of orthologs #803. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 P.knowlesi:132

H3BGK2              	100.00%		B3L233              	100.00%
Bootstrap support for H3BGK2 as seed ortholog is 100%.
Bootstrap support for B3L233 as seed ortholog is 100%.

Group of orthologs #804. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:4 P.knowlesi:59

H2ZYS6              	100.00%		B3L910              	100.00%
H3B897              	38.60%		
Bootstrap support for H2ZYS6 as seed ortholog is 43%.
Alternative seed ortholog is H3A1V2 (4 bits away from this cluster)
Bootstrap support for B3L910 as seed ortholog is 75%.

Group of orthologs #805. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.knowlesi:131

H2ZXW5              	100.00%		B3KZC9              	100.00%
Bootstrap support for H2ZXW5 as seed ortholog is 100%.
Bootstrap support for B3KZC9 as seed ortholog is 100%.

Group of orthologs #806. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.knowlesi:131

H3ALY6              	100.00%		B3L1V2              	100.00%
Bootstrap support for H3ALY6 as seed ortholog is 100%.
Bootstrap support for B3L1V2 as seed ortholog is 100%.

Group of orthologs #807. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.knowlesi:131

H3B4S8              	100.00%		B3L1T9              	100.00%
Bootstrap support for H3B4S8 as seed ortholog is 100%.
Bootstrap support for B3L1T9 as seed ortholog is 100%.

Group of orthologs #808. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.knowlesi:131

H3B3L9              	100.00%		B3L8I3              	100.00%
Bootstrap support for H3B3L9 as seed ortholog is 100%.
Bootstrap support for B3L8I3 as seed ortholog is 100%.

Group of orthologs #809. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 P.knowlesi:57

M3XKD0              	100.00%		B3LDF0              	100.00%
Bootstrap support for M3XKD0 as seed ortholog is 97%.
Bootstrap support for B3LDF0 as seed ortholog is 99%.

Group of orthologs #810. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 P.knowlesi:130

H3ALI2              	100.00%		B3L6X5              	100.00%
H3AMB4              	82.04%		
Bootstrap support for H3ALI2 as seed ortholog is 100%.
Bootstrap support for B3L6X5 as seed ortholog is 100%.

Group of orthologs #811. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 P.knowlesi:130

H3B8J2              	100.00%		B3KZA4              	100.00%
H3BGZ8              	48.35%		
Bootstrap support for H3B8J2 as seed ortholog is 100%.
Bootstrap support for B3KZA4 as seed ortholog is 100%.

Group of orthologs #812. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 P.knowlesi:130

H3B3T1              	100.00%		B3LC08              	100.00%
Bootstrap support for H3B3T1 as seed ortholog is 100%.
Bootstrap support for B3LC08 as seed ortholog is 100%.

Group of orthologs #813. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.knowlesi:129

H3AU25              	100.00%		B3L0Q3              	100.00%
Bootstrap support for H3AU25 as seed ortholog is 100%.
Bootstrap support for B3L0Q3 as seed ortholog is 100%.

Group of orthologs #814. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.knowlesi:129

H3AKN2              	100.00%		B3LA12              	100.00%
Bootstrap support for H3AKN2 as seed ortholog is 100%.
Bootstrap support for B3LA12 as seed ortholog is 100%.

Group of orthologs #815. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.knowlesi:129

H3AWQ0              	100.00%		B3L671              	100.00%
Bootstrap support for H3AWQ0 as seed ortholog is 100%.
Bootstrap support for B3L671 as seed ortholog is 100%.

Group of orthologs #816. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.knowlesi:129

H3B6G4              	100.00%		B3L5D5              	100.00%
Bootstrap support for H3B6G4 as seed ortholog is 100%.
Bootstrap support for B3L5D5 as seed ortholog is 100%.

Group of orthologs #817. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:2 P.knowlesi:128

H3AC93              	100.00%		B3L3X8              	100.00%
M3XII5              	28.32%		
Bootstrap support for H3AC93 as seed ortholog is 50%.
Alternative seed ortholog is H3BA85 (2 bits away from this cluster)
Bootstrap support for B3L3X8 as seed ortholog is 100%.

Group of orthologs #818. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.knowlesi:128

M3XH93              	100.00%		B3L375              	100.00%
H3ADP2              	61.22%		
Bootstrap support for M3XH93 as seed ortholog is 100%.
Bootstrap support for B3L375 as seed ortholog is 100%.

Group of orthologs #819. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.knowlesi:128

H3ACZ3              	100.00%		B3L2K7              	100.00%
Bootstrap support for H3ACZ3 as seed ortholog is 100%.
Bootstrap support for B3L2K7 as seed ortholog is 100%.

Group of orthologs #820. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.knowlesi:128

H3AJA8              	100.00%		B3LCJ4              	100.00%
Bootstrap support for H3AJA8 as seed ortholog is 100%.
Bootstrap support for B3LCJ4 as seed ortholog is 100%.

Group of orthologs #821. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.knowlesi:128

H3BFN8              	100.00%		B3L6N7              	100.00%
Bootstrap support for H3BFN8 as seed ortholog is 89%.
Bootstrap support for B3L6N7 as seed ortholog is 100%.

Group of orthologs #822. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.knowlesi:128

H3BG55              	100.00%		B3LDF1              	100.00%
Bootstrap support for H3BG55 as seed ortholog is 100%.
Bootstrap support for B3LDF1 as seed ortholog is 100%.

Group of orthologs #823. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.knowlesi:128

H3BGH2              	100.00%		B3LD79              	100.00%
Bootstrap support for H3BGH2 as seed ortholog is 100%.
Bootstrap support for B3LD79 as seed ortholog is 100%.

Group of orthologs #824. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.knowlesi:127

H3A0E0              	100.00%		B3KZ11              	100.00%
H3B4H4              	47.44%		
Bootstrap support for H3A0E0 as seed ortholog is 100%.
Bootstrap support for B3KZ11 as seed ortholog is 100%.

Group of orthologs #825. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.knowlesi:127

H3AH26              	100.00%		B3LBP5              	100.00%
H3AXL2              	83.33%		
Bootstrap support for H3AH26 as seed ortholog is 100%.
Bootstrap support for B3LBP5 as seed ortholog is 100%.

Group of orthologs #826. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.knowlesi:127

H3ASC2              	100.00%		B3LC53              	100.00%
H3AV21              	14.41%		
Bootstrap support for H3ASC2 as seed ortholog is 100%.
Bootstrap support for B3LC53 as seed ortholog is 100%.

Group of orthologs #827. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.knowlesi:127

H3AW49              	100.00%		B3LCN4              	100.00%
H3AC99              	61.38%		
Bootstrap support for H3AW49 as seed ortholog is 100%.
Bootstrap support for B3LCN4 as seed ortholog is 100%.

Group of orthologs #828. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.knowlesi:127

H3AK09              	100.00%		B3LD83              	100.00%
Bootstrap support for H3AK09 as seed ortholog is 100%.
Bootstrap support for B3LD83 as seed ortholog is 100%.

Group of orthologs #829. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:35 P.knowlesi:127

H3AVN9              	100.00%		B3L8J4              	100.00%
Bootstrap support for H3AVN9 as seed ortholog is 87%.
Bootstrap support for B3L8J4 as seed ortholog is 100%.

Group of orthologs #830. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.knowlesi:127

H3ATH4              	100.00%		B3LBB5              	100.00%
Bootstrap support for H3ATH4 as seed ortholog is 100%.
Bootstrap support for B3LBB5 as seed ortholog is 100%.

Group of orthologs #831. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.knowlesi:127

H3B8D0              	100.00%		B3KZS5              	100.00%
Bootstrap support for H3B8D0 as seed ortholog is 100%.
Bootstrap support for B3KZS5 as seed ortholog is 100%.

Group of orthologs #832. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.knowlesi:80

H3BEJ8              	100.00%		B3L4D9              	100.00%
H3AZS8              	20.74%		
Bootstrap support for H3BEJ8 as seed ortholog is 99%.
Bootstrap support for B3L4D9 as seed ortholog is 99%.

Group of orthologs #833. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.knowlesi:78

H3A6P0              	100.00%		B3L0G8              	100.00%
Bootstrap support for H3A6P0 as seed ortholog is 100%.
Bootstrap support for B3L0G8 as seed ortholog is 99%.

Group of orthologs #834. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.knowlesi:126

H3AD86              	100.00%		B3L3U4              	100.00%
Bootstrap support for H3AD86 as seed ortholog is 94%.
Bootstrap support for B3L3U4 as seed ortholog is 100%.

Group of orthologs #835. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.knowlesi:126

H3ARI4              	100.00%		B3KZG4              	100.00%
Bootstrap support for H3ARI4 as seed ortholog is 100%.
Bootstrap support for B3KZG4 as seed ortholog is 100%.

Group of orthologs #836. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.knowlesi:33

H3AWP3              	100.00%		B3LCA4              	100.00%
Bootstrap support for H3AWP3 as seed ortholog is 93%.
Bootstrap support for B3LCA4 as seed ortholog is 83%.

Group of orthologs #837. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.knowlesi:126

H3B9D1              	100.00%		B3L3N3              	100.00%
Bootstrap support for H3B9D1 as seed ortholog is 100%.
Bootstrap support for B3L3N3 as seed ortholog is 100%.

Group of orthologs #838. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.knowlesi:126

H3B7Z2              	100.00%		B3LA38              	100.00%
Bootstrap support for H3B7Z2 as seed ortholog is 100%.
Bootstrap support for B3LA38 as seed ortholog is 100%.

Group of orthologs #839. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.knowlesi:71

H3AZZ3              	100.00%		B3L6N9              	100.00%
M3XKQ4              	100.00%		
H3A5K0              	23.68%		
Bootstrap support for H3AZZ3 as seed ortholog is 99%.
Bootstrap support for M3XKQ4 as seed ortholog is 99%.
Bootstrap support for B3L6N9 as seed ortholog is 99%.

Group of orthologs #840. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.knowlesi:125

H2ZZG7              	100.00%		B3L1V3              	100.00%
H3B0F8              	22.86%		
Bootstrap support for H2ZZG7 as seed ortholog is 100%.
Bootstrap support for B3L1V3 as seed ortholog is 100%.

Group of orthologs #841. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.knowlesi:125

H2ZXR7              	100.00%		B3L560              	100.00%
Bootstrap support for H2ZXR7 as seed ortholog is 100%.
Bootstrap support for B3L560 as seed ortholog is 100%.

Group of orthologs #842. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.knowlesi:125

H2ZUS9              	100.00%		B3LD72              	100.00%
Bootstrap support for H2ZUS9 as seed ortholog is 100%.
Bootstrap support for B3LD72 as seed ortholog is 100%.

Group of orthologs #843. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.knowlesi:125

H2ZZT7              	100.00%		B3LD67              	100.00%
Bootstrap support for H2ZZT7 as seed ortholog is 92%.
Bootstrap support for B3LD67 as seed ortholog is 100%.

Group of orthologs #844. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.knowlesi:124

H3AEP2              	100.00%		B3L4T2              	100.00%
H3AMD8              	73.31%		
Bootstrap support for H3AEP2 as seed ortholog is 100%.
Bootstrap support for B3L4T2 as seed ortholog is 100%.

Group of orthologs #845. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.knowlesi:124

H3BGD2              	100.00%		B3L720              	100.00%
H3A825              	68.34%		
Bootstrap support for H3BGD2 as seed ortholog is 100%.
Bootstrap support for B3L720 as seed ortholog is 100%.

Group of orthologs #846. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.knowlesi:124

H3A5X8              	100.00%		B3L937              	100.00%
Bootstrap support for H3A5X8 as seed ortholog is 100%.
Bootstrap support for B3L937 as seed ortholog is 100%.

Group of orthologs #847. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.knowlesi:13

H3AQV2              	100.00%		B3L2Z9              	100.00%
Bootstrap support for H3AQV2 as seed ortholog is 100%.
Bootstrap support for B3L2Z9 as seed ortholog is 65%.
Alternative seed ortholog is B3LAA5 (13 bits away from this cluster)

Group of orthologs #848. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.knowlesi:124

M3XLK4              	100.00%		B3L2D9              	100.00%
Bootstrap support for M3XLK4 as seed ortholog is 100%.
Bootstrap support for B3L2D9 as seed ortholog is 100%.

Group of orthologs #849. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.knowlesi:123

H3A2B9              	100.00%		B3L7Z7              	100.00%
H2ZYB2              	36.11%		
H3B1Y4              	29.86%		
H2ZYU3              	29.86%		
H3ACU3              	23.38%		
H3AAE2              	12.96%		
Bootstrap support for H3A2B9 as seed ortholog is 100%.
Bootstrap support for B3L7Z7 as seed ortholog is 100%.

Group of orthologs #850. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.knowlesi:123

H3ATR6              	100.00%		B3L6L7              	100.00%
H3B0T5              	31.02%		
H3AWT6              	24.44%		
H2ZTX2              	19.06%		
Bootstrap support for H3ATR6 as seed ortholog is 100%.
Bootstrap support for B3L6L7 as seed ortholog is 100%.

Group of orthologs #851. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.knowlesi:123

H3BCF9              	100.00%		B3L087              	100.00%
H3AS61              	7.47%		
Bootstrap support for H3BCF9 as seed ortholog is 100%.
Bootstrap support for B3L087 as seed ortholog is 100%.

Group of orthologs #852. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.knowlesi:123

H3B0N0              	100.00%		B3L6N2              	100.00%
Bootstrap support for H3B0N0 as seed ortholog is 100%.
Bootstrap support for B3L6N2 as seed ortholog is 100%.

Group of orthologs #853. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.knowlesi:123

H3B5C4              	100.00%		B3L662              	100.00%
Bootstrap support for H3B5C4 as seed ortholog is 99%.
Bootstrap support for B3L662 as seed ortholog is 100%.

Group of orthologs #854. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.knowlesi:123

H3BFY7              	100.00%		B3KZ70              	100.00%
Bootstrap support for H3BFY7 as seed ortholog is 100%.
Bootstrap support for B3KZ70 as seed ortholog is 100%.

Group of orthologs #855. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.knowlesi:123

H3BB22              	100.00%		B3L838              	100.00%
Bootstrap support for H3BB22 as seed ortholog is 100%.
Bootstrap support for B3L838 as seed ortholog is 100%.

Group of orthologs #856. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:16 P.knowlesi:122

H3A8K6              	100.00%		B3L4M3              	100.00%
H3B5W8              	59.58%		
H3A337              	19.54%		
H3B0L4              	16.70%		
H3AI14              	16.13%		
H3B152              	15.75%		
H3B3G3              	10.25%		
H3ASZ3              	10.06%		
H3BFZ6              	7.40%		
H3AMZ3              	5.12%		
Bootstrap support for H3A8K6 as seed ortholog is 96%.
Bootstrap support for B3L4M3 as seed ortholog is 100%.

Group of orthologs #857. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.knowlesi:122

H3AE73              	100.00%		B3L1B4              	100.00%
H3B0C9              	35.05%		
H3AP15              	32.48%		
Bootstrap support for H3AE73 as seed ortholog is 99%.
Bootstrap support for B3L1B4 as seed ortholog is 100%.

Group of orthologs #858. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 P.knowlesi:122

H3A8D4              	100.00%		B3L012              	100.00%
Bootstrap support for H3A8D4 as seed ortholog is 100%.
Bootstrap support for B3L012 as seed ortholog is 100%.

Group of orthologs #859. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 P.knowlesi:122

H3A792              	100.00%		B3LAR6              	100.00%
Bootstrap support for H3A792 as seed ortholog is 100%.
Bootstrap support for B3LAR6 as seed ortholog is 100%.

Group of orthologs #860. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 P.knowlesi:122

H3ARF9              	100.00%		B3L050              	100.00%
Bootstrap support for H3ARF9 as seed ortholog is 100%.
Bootstrap support for B3L050 as seed ortholog is 100%.

Group of orthologs #861. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.knowlesi:121

H3A0L2              	100.00%		B3L387              	100.00%
H2ZUH8              	35.25%		
H2ZYT4              	18.02%		
Bootstrap support for H3A0L2 as seed ortholog is 100%.
Bootstrap support for B3L387 as seed ortholog is 100%.

Group of orthologs #862. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.knowlesi:121

H2ZVQ9              	100.00%		B3L796              	100.00%
H3AQR4              	67.31%		
Bootstrap support for H2ZVQ9 as seed ortholog is 100%.
Bootstrap support for B3L796 as seed ortholog is 100%.

Group of orthologs #863. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.knowlesi:121

H3AZC2              	100.00%		B3L7R2              	100.00%
H2ZWE7              	23.47%		
Bootstrap support for H3AZC2 as seed ortholog is 100%.
Bootstrap support for B3L7R2 as seed ortholog is 100%.

Group of orthologs #864. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.knowlesi:79

H3A3F3              	100.00%		B3L1V9              	100.00%
Bootstrap support for H3A3F3 as seed ortholog is 100%.
Bootstrap support for B3L1V9 as seed ortholog is 99%.

Group of orthologs #865. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.knowlesi:121

H3ACU8              	100.00%		B3L4R4              	100.00%
Bootstrap support for H3ACU8 as seed ortholog is 100%.
Bootstrap support for B3L4R4 as seed ortholog is 100%.

Group of orthologs #866. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.knowlesi:121

H3B636              	100.00%		B3LD34              	100.00%
Bootstrap support for H3B636 as seed ortholog is 100%.
Bootstrap support for B3LD34 as seed ortholog is 100%.

Group of orthologs #867. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 P.knowlesi:120

H2ZRK7              	100.00%		B3L7B0              	100.00%
M3XHC8              	43.88%		
Bootstrap support for H2ZRK7 as seed ortholog is 100%.
Bootstrap support for B3L7B0 as seed ortholog is 100%.

Group of orthologs #868. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 P.knowlesi:120

H3B274              	100.00%		B3L404              	100.00%
H3A8D8              	70.07%		
Bootstrap support for H3B274 as seed ortholog is 100%.
Bootstrap support for B3L404 as seed ortholog is 100%.

Group of orthologs #869. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:26 P.knowlesi:22

H3ACB6              	100.00%		B3LBA2              	100.00%
Bootstrap support for H3ACB6 as seed ortholog is 82%.
Bootstrap support for B3LBA2 as seed ortholog is 86%.

Group of orthologs #870. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 P.knowlesi:120

H3ASU4              	100.00%		B3L8T1              	100.00%
Bootstrap support for H3ASU4 as seed ortholog is 100%.
Bootstrap support for B3L8T1 as seed ortholog is 100%.

Group of orthologs #871. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 P.knowlesi:120

H3AUY6              	100.00%		B3L7V2              	100.00%
Bootstrap support for H3AUY6 as seed ortholog is 100%.
Bootstrap support for B3L7V2 as seed ortholog is 100%.

Group of orthologs #872. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.knowlesi:119

H3AP70              	100.00%		B3LAB4              	100.00%
H3B2N7              	46.64%		
H3AS17              	43.72%		
H3AT85              	39.01%		
Bootstrap support for H3AP70 as seed ortholog is 100%.
Bootstrap support for B3LAB4 as seed ortholog is 100%.

Group of orthologs #873. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.knowlesi:27

H2ZWX8              	100.00%		B3L0J3              	100.00%
H3AWS9              	54.13%		
H3A1C4              	9.35%		
Bootstrap support for H2ZWX8 as seed ortholog is 94%.
Bootstrap support for B3L0J3 as seed ortholog is 79%.

Group of orthologs #874. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.knowlesi:119

H3B373              	100.00%		B3LC29              	100.00%
M3XJ05              	71.44%		B3LC28              	8.58%
Bootstrap support for H3B373 as seed ortholog is 100%.
Bootstrap support for B3LC29 as seed ortholog is 100%.

Group of orthologs #875. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.knowlesi:46

H3A3L7              	100.00%		B3KZ61              	100.00%
H3BDI2              	58.32%		
Bootstrap support for H3A3L7 as seed ortholog is 100%.
Bootstrap support for B3KZ61 as seed ortholog is 87%.

Group of orthologs #876. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.knowlesi:119

H2ZTK0              	100.00%		B3L2Q6              	100.00%
Bootstrap support for H2ZTK0 as seed ortholog is 100%.
Bootstrap support for B3L2Q6 as seed ortholog is 100%.

Group of orthologs #877. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.knowlesi:119

H3A8M1              	100.00%		B3L0Q9              	100.00%
Bootstrap support for H3A8M1 as seed ortholog is 100%.
Bootstrap support for B3L0Q9 as seed ortholog is 100%.

Group of orthologs #878. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.knowlesi:119

H3B8R7              	100.00%		B3L645              	100.00%
Bootstrap support for H3B8R7 as seed ortholog is 100%.
Bootstrap support for B3L645 as seed ortholog is 100%.

Group of orthologs #879. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.knowlesi:118

H3AWM8              	100.00%		B3L2L5              	100.00%
H3AK51              	25.64%		
H2ZXV2              	17.24%		
Bootstrap support for H3AWM8 as seed ortholog is 100%.
Bootstrap support for B3L2L5 as seed ortholog is 100%.

Group of orthologs #880. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:39 P.knowlesi:62

H2ZXP5              	100.00%		B3L6T2              	100.00%
Bootstrap support for H2ZXP5 as seed ortholog is 80%.
Bootstrap support for B3L6T2 as seed ortholog is 93%.

Group of orthologs #881. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 P.knowlesi:118

H2ZYG8              	100.00%		B3L8B5              	100.00%
Bootstrap support for H2ZYG8 as seed ortholog is 92%.
Bootstrap support for B3L8B5 as seed ortholog is 100%.

Group of orthologs #882. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.knowlesi:118

H3A9S8              	100.00%		B3L1D4              	100.00%
Bootstrap support for H3A9S8 as seed ortholog is 100%.
Bootstrap support for B3L1D4 as seed ortholog is 100%.

Group of orthologs #883. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.knowlesi:118

H3AES1              	100.00%		B3L358              	100.00%
Bootstrap support for H3AES1 as seed ortholog is 100%.
Bootstrap support for B3L358 as seed ortholog is 100%.

Group of orthologs #884. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.knowlesi:118

H3AD61              	100.00%		B3L4X8              	100.00%
Bootstrap support for H3AD61 as seed ortholog is 100%.
Bootstrap support for B3L4X8 as seed ortholog is 100%.

Group of orthologs #885. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:31 P.knowlesi:118

H3AF98              	100.00%		B3L8U3              	100.00%
Bootstrap support for H3AF98 as seed ortholog is 82%.
Bootstrap support for B3L8U3 as seed ortholog is 100%.

Group of orthologs #886. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.knowlesi:118

H3ANB9              	100.00%		B3LCJ3              	100.00%
Bootstrap support for H3ANB9 as seed ortholog is 100%.
Bootstrap support for B3LCJ3 as seed ortholog is 100%.

Group of orthologs #887. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.knowlesi:117

H3A7B9              	100.00%		B3L9E2              	100.00%
H3AZZ0              	31.93%		
H3B0D3              	31.84%		
H2ZS93              	30.99%		
H3B0S3              	29.78%		
H3AZ79              	25.75%		
H3AZM6              	24.91%		
H3ALK3              	22.47%		
H3A9Q8              	13.01%		
Bootstrap support for H3A7B9 as seed ortholog is 100%.
Bootstrap support for B3L9E2 as seed ortholog is 100%.

Group of orthologs #888. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.knowlesi:117

H3BAB5              	100.00%		B3LBQ8              	100.00%
Bootstrap support for H3BAB5 as seed ortholog is 100%.
Bootstrap support for B3LBQ8 as seed ortholog is 100%.

Group of orthologs #889. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 P.knowlesi:116

H3A653              	100.00%		B3L6A8              	100.00%
H3AL00              	58.54%		
H3A708              	38.05%		
Bootstrap support for H3A653 as seed ortholog is 100%.
Bootstrap support for B3L6A8 as seed ortholog is 100%.

Group of orthologs #890. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 P.knowlesi:37

H3AB04              	100.00%		B3LCA6              	100.00%
H2ZZA5              	36.70%		B3LBQ4              	8.06%
Bootstrap support for H3AB04 as seed ortholog is 92%.
Bootstrap support for B3LCA6 as seed ortholog is 81%.

Group of orthologs #891. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.knowlesi:47

H3BB97              	100.00%		B3KZF9              	100.00%
H3AMS8              	32.43%		
H3API9              	14.53%		
Bootstrap support for H3BB97 as seed ortholog is 100%.
Bootstrap support for B3KZF9 as seed ortholog is 91%.

Group of orthologs #892. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.knowlesi:115

H3AGQ4              	100.00%		B3L9F7              	100.00%
H3ABM3              	95.00%		
Bootstrap support for H3AGQ4 as seed ortholog is 100%.
Bootstrap support for B3L9F7 as seed ortholog is 100%.

Group of orthologs #893. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.knowlesi:115

H3AYS1              	100.00%		B3L7C4              	100.00%
H2ZU08              	60.59%		
Bootstrap support for H3AYS1 as seed ortholog is 100%.
Bootstrap support for B3L7C4 as seed ortholog is 100%.

Group of orthologs #894. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.knowlesi:115

H3A0T0              	100.00%		B3L5K5              	100.00%
Bootstrap support for H3A0T0 as seed ortholog is 100%.
Bootstrap support for B3L5K5 as seed ortholog is 100%.

Group of orthologs #895. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.knowlesi:115

H3AE06              	100.00%		B3L1L3              	100.00%
Bootstrap support for H3AE06 as seed ortholog is 100%.
Bootstrap support for B3L1L3 as seed ortholog is 100%.

Group of orthologs #896. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.knowlesi:115

H3AS85              	100.00%		B3L3E4              	100.00%
Bootstrap support for H3AS85 as seed ortholog is 100%.
Bootstrap support for B3L3E4 as seed ortholog is 100%.

Group of orthologs #897. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.knowlesi:115

H3AYW0              	100.00%		B3LD31              	100.00%
Bootstrap support for H3AYW0 as seed ortholog is 100%.
Bootstrap support for B3LD31 as seed ortholog is 100%.

Group of orthologs #898. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.knowlesi:114

H3A455              	100.00%		B3L4C6              	100.00%
H3AG94              	100.00%		
Bootstrap support for H3A455 as seed ortholog is 100%.
Bootstrap support for H3AG94 as seed ortholog is 100%.
Bootstrap support for B3L4C6 as seed ortholog is 100%.

Group of orthologs #899. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:35 P.knowlesi:64

H3AAV3              	100.00%		B3L9Q0              	100.00%
M3XIP7              	43.75%		
Bootstrap support for H3AAV3 as seed ortholog is 89%.
Bootstrap support for B3L9Q0 as seed ortholog is 98%.

Group of orthologs #900. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.knowlesi:114

H3BD64              	100.00%		B3L7Y3              	100.00%
H3B9T5              	42.64%		
Bootstrap support for H3BD64 as seed ortholog is 100%.
Bootstrap support for B3L7Y3 as seed ortholog is 100%.

Group of orthologs #901. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.knowlesi:114

H3AXA9              	100.00%		B3L5N8              	100.00%
Bootstrap support for H3AXA9 as seed ortholog is 100%.
Bootstrap support for B3L5N8 as seed ortholog is 100%.

Group of orthologs #902. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.knowlesi:114

H3BDE2              	100.00%		B3L7Y6              	100.00%
Bootstrap support for H3BDE2 as seed ortholog is 100%.
Bootstrap support for B3L7Y6 as seed ortholog is 100%.

Group of orthologs #903. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.knowlesi:114

M3XH82              	100.00%		B3L530              	100.00%
Bootstrap support for M3XH82 as seed ortholog is 100%.
Bootstrap support for B3L530 as seed ortholog is 100%.

Group of orthologs #904. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.knowlesi:113

H2ZWA0              	100.00%		B3L7Y1              	100.00%
H3AYF9              	44.03%		
Bootstrap support for H2ZWA0 as seed ortholog is 100%.
Bootstrap support for B3L7Y1 as seed ortholog is 100%.

Group of orthologs #905. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.knowlesi:113

H3A4E1              	100.00%		B3LD77              	100.00%
M3XGN6              	58.12%		
Bootstrap support for H3A4E1 as seed ortholog is 100%.
Bootstrap support for B3LD77 as seed ortholog is 100%.

Group of orthologs #906. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.knowlesi:113

H3B9P1              	100.00%		B3L174              	100.00%
H3BG33              	47.06%		
Bootstrap support for H3B9P1 as seed ortholog is 100%.
Bootstrap support for B3L174 as seed ortholog is 100%.

Group of orthologs #907. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.knowlesi:113

H3B6I1              	100.00%		B3L600              	100.00%
H3APN9              	41.02%		
Bootstrap support for H3B6I1 as seed ortholog is 100%.
Bootstrap support for B3L600 as seed ortholog is 100%.

Group of orthologs #908. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.knowlesi:113

H3AB44              	100.00%		B3L0N9              	100.00%
Bootstrap support for H3AB44 as seed ortholog is 100%.
Bootstrap support for B3L0N9 as seed ortholog is 100%.

Group of orthologs #909. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.knowlesi:113

H3AUK5              	100.00%		B3L4J9              	100.00%
Bootstrap support for H3AUK5 as seed ortholog is 100%.
Bootstrap support for B3L4J9 as seed ortholog is 100%.

Group of orthologs #910. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.knowlesi:14

H3B8Z0              	100.00%		B3L0X3              	100.00%
Bootstrap support for H3B8Z0 as seed ortholog is 93%.
Bootstrap support for B3L0X3 as seed ortholog is 65%.
Alternative seed ortholog is B3L7V6 (14 bits away from this cluster)

Group of orthologs #911. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.knowlesi:113

H3B8C1              	100.00%		B3L5Q0              	100.00%
Bootstrap support for H3B8C1 as seed ortholog is 100%.
Bootstrap support for B3L5Q0 as seed ortholog is 100%.

Group of orthologs #912. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.knowlesi:112

H3AUE0              	100.00%		B3L6U4              	100.00%
H3BBE2              	61.49%		
Bootstrap support for H3AUE0 as seed ortholog is 92%.
Bootstrap support for B3L6U4 as seed ortholog is 100%.

Group of orthologs #913. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.knowlesi:112

H3AW52              	100.00%		B3L774              	100.00%
H2ZVS1              	15.82%		
Bootstrap support for H3AW52 as seed ortholog is 100%.
Bootstrap support for B3L774 as seed ortholog is 100%.

Group of orthologs #914. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.knowlesi:51

H3AAF0              	100.00%		B3L053              	100.00%
Bootstrap support for H3AAF0 as seed ortholog is 95%.
Bootstrap support for B3L053 as seed ortholog is 93%.

Group of orthologs #915. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.knowlesi:38

H3B0Q9              	100.00%		B3L1V8              	100.00%
Bootstrap support for H3B0Q9 as seed ortholog is 99%.
Bootstrap support for B3L1V8 as seed ortholog is 85%.

Group of orthologs #916. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.knowlesi:112

H3B5S7              	100.00%		B3L3B0              	100.00%
Bootstrap support for H3B5S7 as seed ortholog is 100%.
Bootstrap support for B3L3B0 as seed ortholog is 100%.

Group of orthologs #917. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.knowlesi:43

H3B2B4              	100.00%		B3L8Y8              	100.00%
Bootstrap support for H3B2B4 as seed ortholog is 100%.
Bootstrap support for B3L8Y8 as seed ortholog is 95%.

Group of orthologs #918. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.knowlesi:59

H3BDA3              	100.00%		B3L1H3              	100.00%
H3B5R9              	27.19%		
Bootstrap support for H3BDA3 as seed ortholog is 100%.
Bootstrap support for B3L1H3 as seed ortholog is 99%.

Group of orthologs #919. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.knowlesi:111

H3AW82              	100.00%		B3L0B4              	100.00%
Bootstrap support for H3AW82 as seed ortholog is 100%.
Bootstrap support for B3L0B4 as seed ortholog is 100%.

Group of orthologs #920. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.knowlesi:111

H3B128              	100.00%		B3L5N5              	100.00%
Bootstrap support for H3B128 as seed ortholog is 100%.
Bootstrap support for B3L5N5 as seed ortholog is 100%.

Group of orthologs #921. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.knowlesi:49

H3B0X0              	100.00%		B3LC98              	100.00%
Bootstrap support for H3B0X0 as seed ortholog is 100%.
Bootstrap support for B3LC98 as seed ortholog is 77%.

Group of orthologs #922. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.knowlesi:111

H3BGA5              	100.00%		B3L070              	100.00%
Bootstrap support for H3BGA5 as seed ortholog is 100%.
Bootstrap support for B3L070 as seed ortholog is 100%.

Group of orthologs #923. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.knowlesi:111

H3BH98              	100.00%		B3L7J1              	100.00%
Bootstrap support for H3BH98 as seed ortholog is 100%.
Bootstrap support for B3L7J1 as seed ortholog is 100%.

Group of orthologs #924. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.knowlesi:110

H3AF68              	100.00%		B3L2S2              	100.00%
H3B2T4              	100.00%		
H3A460              	28.08%		
Bootstrap support for H3AF68 as seed ortholog is 100%.
Bootstrap support for H3B2T4 as seed ortholog is 100%.
Bootstrap support for B3L2S2 as seed ortholog is 100%.

Group of orthologs #925. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.knowlesi:110

H3ABR9              	100.00%		B3KZ52              	100.00%
H3A3N3              	96.80%		
Bootstrap support for H3ABR9 as seed ortholog is 100%.
Bootstrap support for B3KZ52 as seed ortholog is 100%.

Group of orthologs #926. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.knowlesi:110

H3A461              	100.00%		B3L246              	100.00%
Bootstrap support for H3A461 as seed ortholog is 100%.
Bootstrap support for B3L246 as seed ortholog is 100%.

Group of orthologs #927. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.knowlesi:110

H2ZZ01              	100.00%		B3LD37              	100.00%
Bootstrap support for H2ZZ01 as seed ortholog is 100%.
Bootstrap support for B3LD37 as seed ortholog is 100%.

Group of orthologs #928. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.knowlesi:110

H3B183              	100.00%		B3L1P2              	100.00%
Bootstrap support for H3B183 as seed ortholog is 100%.
Bootstrap support for B3L1P2 as seed ortholog is 100%.

Group of orthologs #929. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.knowlesi:109

H3AB23              	100.00%		B3LC41              	100.00%
H3AE10              	23.06%		
Bootstrap support for H3AB23 as seed ortholog is 95%.
Bootstrap support for B3LC41 as seed ortholog is 100%.

Group of orthologs #930. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.knowlesi:109

H2ZZC6              	100.00%		B3L576              	100.00%
Bootstrap support for H2ZZC6 as seed ortholog is 100%.
Bootstrap support for B3L576 as seed ortholog is 100%.

Group of orthologs #931. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.knowlesi:109

H3A604              	100.00%		B3L1B3              	100.00%
Bootstrap support for H3A604 as seed ortholog is 89%.
Bootstrap support for B3L1B3 as seed ortholog is 100%.

Group of orthologs #932. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.knowlesi:109

H3ABN4              	100.00%		B3L3A4              	100.00%
Bootstrap support for H3ABN4 as seed ortholog is 100%.
Bootstrap support for B3L3A4 as seed ortholog is 100%.

Group of orthologs #933. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.knowlesi:109

H3AGZ0              	100.00%		B3KZ77              	100.00%
Bootstrap support for H3AGZ0 as seed ortholog is 100%.
Bootstrap support for B3KZ77 as seed ortholog is 100%.

Group of orthologs #934. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:24 P.knowlesi:109

H3AI59              	100.00%		B3L258              	100.00%
Bootstrap support for H3AI59 as seed ortholog is 72%.
Alternative seed ortholog is H3BHA6 (24 bits away from this cluster)
Bootstrap support for B3L258 as seed ortholog is 100%.

Group of orthologs #935. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.knowlesi:109

H3ACS1              	100.00%		B3L926              	100.00%
Bootstrap support for H3ACS1 as seed ortholog is 100%.
Bootstrap support for B3L926 as seed ortholog is 100%.

Group of orthologs #936. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.knowlesi:109

H3AH83              	100.00%		B3L5N7              	100.00%
Bootstrap support for H3AH83 as seed ortholog is 100%.
Bootstrap support for B3L5N7 as seed ortholog is 100%.

Group of orthologs #937. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.knowlesi:109

H3BAT3              	100.00%		B3L1L6              	100.00%
Bootstrap support for H3BAT3 as seed ortholog is 100%.
Bootstrap support for B3L1L6 as seed ortholog is 100%.

Group of orthologs #938. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.knowlesi:108

H3BFM6              	100.00%		B3L6I6              	100.00%
                    	       		B3L5W0              	14.34%
Bootstrap support for H3BFM6 as seed ortholog is 100%.
Bootstrap support for B3L6I6 as seed ortholog is 100%.

Group of orthologs #939. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.knowlesi:34

H2ZRS3              	100.00%		B3L5I2              	100.00%
Bootstrap support for H2ZRS3 as seed ortholog is 100%.
Bootstrap support for B3L5I2 as seed ortholog is 80%.

Group of orthologs #940. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.knowlesi:108

H3A6I2              	100.00%		B3L307              	100.00%
Bootstrap support for H3A6I2 as seed ortholog is 100%.
Bootstrap support for B3L307 as seed ortholog is 100%.

Group of orthologs #941. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.knowlesi:108

H3A0K1              	100.00%		B3L899              	100.00%
Bootstrap support for H3A0K1 as seed ortholog is 100%.
Bootstrap support for B3L899 as seed ortholog is 100%.

Group of orthologs #942. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.knowlesi:108

H3A4M9              	100.00%		B3L5N0              	100.00%
Bootstrap support for H3A4M9 as seed ortholog is 100%.
Bootstrap support for B3L5N0 as seed ortholog is 100%.

Group of orthologs #943. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.knowlesi:108

H3B5T9              	100.00%		B3L6X6              	100.00%
Bootstrap support for H3B5T9 as seed ortholog is 100%.
Bootstrap support for B3L6X6 as seed ortholog is 100%.

Group of orthologs #944. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.knowlesi:108

H3BG34              	100.00%		B3L366              	100.00%
Bootstrap support for H3BG34 as seed ortholog is 100%.
Bootstrap support for B3L366 as seed ortholog is 100%.

Group of orthologs #945. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.knowlesi:15

H3B6S6              	100.00%		B3L2L6              	100.00%
Bootstrap support for H3B6S6 as seed ortholog is 100%.
Bootstrap support for B3L2L6 as seed ortholog is 62%.
Alternative seed ortholog is B3L1L2 (15 bits away from this cluster)

Group of orthologs #946. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.knowlesi:107

M3XJ75              	100.00%		B3L554              	100.00%
Bootstrap support for M3XJ75 as seed ortholog is 100%.
Bootstrap support for B3L554 as seed ortholog is 100%.

Group of orthologs #947. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.knowlesi:106

H3A0C5              	100.00%		B3L346              	100.00%
H3AV39              	54.77%		
H3AC46              	48.62%		
Bootstrap support for H3A0C5 as seed ortholog is 100%.
Bootstrap support for B3L346 as seed ortholog is 100%.

Group of orthologs #948. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.knowlesi:106

H3AG71              	100.00%		B3LDD6              	100.00%
H3B2Q5              	31.84%		
Bootstrap support for H3AG71 as seed ortholog is 100%.
Bootstrap support for B3LDD6 as seed ortholog is 100%.

Group of orthologs #949. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.knowlesi:106

H3B7H9              	100.00%		B3L3N5              	100.00%
H3BCY5              	70.30%		
Bootstrap support for H3B7H9 as seed ortholog is 100%.
Bootstrap support for B3L3N5 as seed ortholog is 100%.

Group of orthologs #950. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.knowlesi:106

H2ZRM7              	100.00%		B3L5Z9              	100.00%
Bootstrap support for H2ZRM7 as seed ortholog is 97%.
Bootstrap support for B3L5Z9 as seed ortholog is 100%.

Group of orthologs #951. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.knowlesi:106

H3AI62              	100.00%		B3L1X8              	100.00%
Bootstrap support for H3AI62 as seed ortholog is 100%.
Bootstrap support for B3L1X8 as seed ortholog is 100%.

Group of orthologs #952. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.knowlesi:106

H3AD82              	100.00%		B3LD22              	100.00%
Bootstrap support for H3AD82 as seed ortholog is 100%.
Bootstrap support for B3LD22 as seed ortholog is 100%.

Group of orthologs #953. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.knowlesi:106

H3AK60              	100.00%		B3L7C1              	100.00%
Bootstrap support for H3AK60 as seed ortholog is 100%.
Bootstrap support for B3L7C1 as seed ortholog is 100%.

Group of orthologs #954. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.knowlesi:106

H3AJF5              	100.00%		B3LDB5              	100.00%
Bootstrap support for H3AJF5 as seed ortholog is 100%.
Bootstrap support for B3LDB5 as seed ortholog is 100%.

Group of orthologs #955. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.knowlesi:106

H3B1J9              	100.00%		B3KZQ9              	100.00%
Bootstrap support for H3B1J9 as seed ortholog is 100%.
Bootstrap support for B3KZQ9 as seed ortholog is 100%.

Group of orthologs #956. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.knowlesi:106

H3B267              	100.00%		B3L8R0              	100.00%
Bootstrap support for H3B267 as seed ortholog is 100%.
Bootstrap support for B3L8R0 as seed ortholog is 100%.

Group of orthologs #957. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.knowlesi:106

H3BG60              	100.00%		B3L433              	100.00%
Bootstrap support for H3BG60 as seed ortholog is 100%.
Bootstrap support for B3L433 as seed ortholog is 100%.

Group of orthologs #958. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.knowlesi:106

H3BCA4              	100.00%		B3L9G3              	100.00%
Bootstrap support for H3BCA4 as seed ortholog is 100%.
Bootstrap support for B3L9G3 as seed ortholog is 100%.

Group of orthologs #959. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.knowlesi:105

H3B5E5              	100.00%		B3L8R6              	100.00%
H2ZSM3              	24.53%		
Bootstrap support for H3B5E5 as seed ortholog is 100%.
Bootstrap support for B3L8R6 as seed ortholog is 100%.

Group of orthologs #960. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.knowlesi:105

H2ZXQ5              	100.00%		B3KZI2              	100.00%
Bootstrap support for H2ZXQ5 as seed ortholog is 100%.
Bootstrap support for B3KZI2 as seed ortholog is 100%.

Group of orthologs #961. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.knowlesi:105

H3A886              	100.00%		B3L125              	100.00%
Bootstrap support for H3A886 as seed ortholog is 100%.
Bootstrap support for B3L125 as seed ortholog is 100%.

Group of orthologs #962. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.knowlesi:105

H3AAY7              	100.00%		B3LBJ2              	100.00%
Bootstrap support for H3AAY7 as seed ortholog is 100%.
Bootstrap support for B3LBJ2 as seed ortholog is 100%.

Group of orthologs #963. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:34 P.knowlesi:105

H3APT4              	100.00%		B3L001              	100.00%
Bootstrap support for H3APT4 as seed ortholog is 90%.
Bootstrap support for B3L001 as seed ortholog is 100%.

Group of orthologs #964. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.knowlesi:45

H3B1B8              	100.00%		B3L2I4              	100.00%
Bootstrap support for H3B1B8 as seed ortholog is 100%.
Bootstrap support for B3L2I4 as seed ortholog is 91%.

Group of orthologs #965. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.knowlesi:105

H3B7F4              	100.00%		B3LB79              	100.00%
Bootstrap support for H3B7F4 as seed ortholog is 100%.
Bootstrap support for B3LB79 as seed ortholog is 100%.

Group of orthologs #966. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.knowlesi:105

H3BIS6              	100.00%		B3L6U3              	100.00%
Bootstrap support for H3BIS6 as seed ortholog is 100%.
Bootstrap support for B3L6U3 as seed ortholog is 100%.

Group of orthologs #967. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 P.knowlesi:104

H3A3U4              	100.00%		B3L1V7              	100.00%
H3ADN4              	26.32%		
Bootstrap support for H3A3U4 as seed ortholog is 95%.
Bootstrap support for B3L1V7 as seed ortholog is 100%.

Group of orthologs #968. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.knowlesi:104

H2ZUI6              	100.00%		B3L766              	100.00%
Bootstrap support for H2ZUI6 as seed ortholog is 100%.
Bootstrap support for B3L766 as seed ortholog is 100%.

Group of orthologs #969. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.knowlesi:37

H2ZY23              	100.00%		B3L9J3              	100.00%
Bootstrap support for H2ZY23 as seed ortholog is 100%.
Bootstrap support for B3L9J3 as seed ortholog is 98%.

Group of orthologs #970. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.knowlesi:104

H3A449              	100.00%		B3L4G7              	100.00%
Bootstrap support for H3A449 as seed ortholog is 100%.
Bootstrap support for B3L4G7 as seed ortholog is 100%.

Group of orthologs #971. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.knowlesi:104

H3A726              	100.00%		B3L2R9              	100.00%
Bootstrap support for H3A726 as seed ortholog is 100%.
Bootstrap support for B3L2R9 as seed ortholog is 100%.

Group of orthologs #972. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.knowlesi:104

H3APJ6              	100.00%		B3L9E9              	100.00%
Bootstrap support for H3APJ6 as seed ortholog is 100%.
Bootstrap support for B3L9E9 as seed ortholog is 100%.

Group of orthologs #973. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.knowlesi:104

H3BAX6              	100.00%		B3L687              	100.00%
Bootstrap support for H3BAX6 as seed ortholog is 100%.
Bootstrap support for B3L687 as seed ortholog is 100%.

Group of orthologs #974. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.knowlesi:104

H3B8U6              	100.00%		B3LAA1              	100.00%
Bootstrap support for H3B8U6 as seed ortholog is 100%.
Bootstrap support for B3LAA1 as seed ortholog is 100%.

Group of orthologs #975. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.knowlesi:103

H3A8E5              	100.00%		B3L791              	100.00%
H3BAA6              	43.31%		
Bootstrap support for H3A8E5 as seed ortholog is 100%.
Bootstrap support for B3L791 as seed ortholog is 100%.

Group of orthologs #976. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.knowlesi:103

H3A243              	100.00%		B3LBQ7              	100.00%
Bootstrap support for H3A243 as seed ortholog is 100%.
Bootstrap support for B3LBQ7 as seed ortholog is 100%.

Group of orthologs #977. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.knowlesi:103

H3ASP7              	100.00%		B3L399              	100.00%
Bootstrap support for H3ASP7 as seed ortholog is 100%.
Bootstrap support for B3L399 as seed ortholog is 100%.

Group of orthologs #978. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.knowlesi:103

H3AVF5              	100.00%		B3L4F5              	100.00%
Bootstrap support for H3AVF5 as seed ortholog is 100%.
Bootstrap support for B3L4F5 as seed ortholog is 100%.

Group of orthologs #979. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.knowlesi:103

H3AWI1              	100.00%		B3LBD6              	100.00%
Bootstrap support for H3AWI1 as seed ortholog is 100%.
Bootstrap support for B3LBD6 as seed ortholog is 100%.

Group of orthologs #980. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.knowlesi:103

H3BGJ8              	100.00%		B3L6J2              	100.00%
Bootstrap support for H3BGJ8 as seed ortholog is 100%.
Bootstrap support for B3L6J2 as seed ortholog is 100%.

Group of orthologs #981. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.knowlesi:102

H3B4Q3              	100.00%		B3L372              	100.00%
H3A2U8              	29.76%		
Bootstrap support for H3B4Q3 as seed ortholog is 100%.
Bootstrap support for B3L372 as seed ortholog is 100%.

Group of orthologs #982. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.knowlesi:102

H3AE33              	100.00%		B3LAM7              	100.00%
Bootstrap support for H3AE33 as seed ortholog is 100%.
Bootstrap support for B3LAM7 as seed ortholog is 100%.

Group of orthologs #983. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.knowlesi:102

H3BFC0              	100.00%		B3L580              	100.00%
Bootstrap support for H3BFC0 as seed ortholog is 100%.
Bootstrap support for B3L580 as seed ortholog is 100%.

Group of orthologs #984. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.knowlesi:101

H2ZX72              	100.00%		B3L0Q7              	100.00%
H3BDU1              	58.45%		
H3BIB7              	38.45%		
H3AZL2              	38.10%		
H3A4N3              	36.72%		
H2ZWC3              	36.64%		
H2ZRV4              	35.26%		
H3A4J1              	34.83%		
H3B921              	34.74%		
H3BI94              	34.74%		
H3B302              	34.66%		
H2ZYV9              	33.79%		
H3B2Y8              	31.55%		
H3AG86              	30.52%		
H3AUR4              	26.64%		
H3AHW6              	26.47%		
H3AQG6              	25.78%		
H3B6Q8              	23.88%		
H2ZZZ4              	23.45%		
H3BFK6              	21.47%		
H3AB15              	21.12%		
H2ZXA6              	15.95%		
H3ADK3              	15.86%		
H3A1D8              	15.09%		
Bootstrap support for H2ZX72 as seed ortholog is 100%.
Bootstrap support for B3L0Q7 as seed ortholog is 100%.

Group of orthologs #985. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.knowlesi:101

H3A218              	100.00%		B3L7G1              	100.00%
Bootstrap support for H3A218 as seed ortholog is 100%.
Bootstrap support for B3L7G1 as seed ortholog is 100%.

Group of orthologs #986. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.knowlesi:101

H3ABA0              	100.00%		B3L3G4              	100.00%
Bootstrap support for H3ABA0 as seed ortholog is 100%.
Bootstrap support for B3L3G4 as seed ortholog is 100%.

Group of orthologs #987. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.knowlesi:101

H3ALE6              	100.00%		B3LAV5              	100.00%
Bootstrap support for H3ALE6 as seed ortholog is 100%.
Bootstrap support for B3LAV5 as seed ortholog is 100%.

Group of orthologs #988. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.knowlesi:101

M3XJ77              	100.00%		B3L790              	100.00%
Bootstrap support for M3XJ77 as seed ortholog is 100%.
Bootstrap support for B3L790 as seed ortholog is 100%.

Group of orthologs #989. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 P.knowlesi:100

H3ATN5              	100.00%		B3LAL2              	100.00%
Bootstrap support for H3ATN5 as seed ortholog is 100%.
Bootstrap support for B3LAL2 as seed ortholog is 100%.

Group of orthologs #990. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 P.knowlesi:100

H3B2F2              	100.00%		B3L4S9              	100.00%
Bootstrap support for H3B2F2 as seed ortholog is 100%.
Bootstrap support for B3L4S9 as seed ortholog is 100%.

Group of orthologs #991. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.knowlesi:99

H3BAU9              	100.00%		B3L0K0              	100.00%
M3XH54              	53.44%		
Bootstrap support for H3BAU9 as seed ortholog is 100%.
Bootstrap support for B3L0K0 as seed ortholog is 100%.

Group of orthologs #992. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.knowlesi:99

H3A2W0              	100.00%		B3L0U7              	100.00%
Bootstrap support for H3A2W0 as seed ortholog is 100%.
Bootstrap support for B3L0U7 as seed ortholog is 100%.

Group of orthologs #993. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.knowlesi:99

H3AB03              	100.00%		B3L4A3              	100.00%
Bootstrap support for H3AB03 as seed ortholog is 100%.
Bootstrap support for B3L4A3 as seed ortholog is 100%.

Group of orthologs #994. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.knowlesi:99

H3A7W2              	100.00%		B3L9Z9              	100.00%
Bootstrap support for H3A7W2 as seed ortholog is 100%.
Bootstrap support for B3L9Z9 as seed ortholog is 100%.

Group of orthologs #995. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.knowlesi:99

H3ABM9              	100.00%		B3LBJ3              	100.00%
Bootstrap support for H3ABM9 as seed ortholog is 100%.
Bootstrap support for B3LBJ3 as seed ortholog is 100%.

Group of orthologs #996. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.knowlesi:99

H3AXF9              	100.00%		B3L891              	100.00%
Bootstrap support for H3AXF9 as seed ortholog is 100%.
Bootstrap support for B3L891 as seed ortholog is 100%.

Group of orthologs #997. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.knowlesi:99

M3XIV4              	100.00%		B3L2X0              	100.00%
Bootstrap support for M3XIV4 as seed ortholog is 100%.
Bootstrap support for B3L2X0 as seed ortholog is 100%.

Group of orthologs #998. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.knowlesi:99

H3BF69              	100.00%		B3L7V0              	100.00%
Bootstrap support for H3BF69 as seed ortholog is 100%.
Bootstrap support for B3L7V0 as seed ortholog is 100%.

Group of orthologs #999. Best score 98 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 P.knowlesi:98

H2ZWC2              	100.00%		B3L9Y0              	100.00%
Bootstrap support for H2ZWC2 as seed ortholog is 100%.
Bootstrap support for B3L9Y0 as seed ortholog is 100%.

Group of orthologs #1000. Best score 98 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 P.knowlesi:98

H3AIL2              	100.00%		B3L7D2              	100.00%
Bootstrap support for H3AIL2 as seed ortholog is 100%.
Bootstrap support for B3L7D2 as seed ortholog is 100%.

Group of orthologs #1001. Best score 98 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 P.knowlesi:98

H3B417              	100.00%		B3L2X6              	100.00%
Bootstrap support for H3B417 as seed ortholog is 100%.
Bootstrap support for B3L2X6 as seed ortholog is 100%.

Group of orthologs #1002. Best score 98 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 P.knowlesi:98

M3XHD0              	100.00%		B3L9Y4              	100.00%
Bootstrap support for M3XHD0 as seed ortholog is 100%.
Bootstrap support for B3L9Y4 as seed ortholog is 100%.

Group of orthologs #1003. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.knowlesi:34

H3B7S2              	100.00%		B3L637              	100.00%
H3BC57              	66.13%		
H3B5I8              	52.35%		
H3B786              	18.96%		
Bootstrap support for H3B7S2 as seed ortholog is 100%.
Bootstrap support for B3L637 as seed ortholog is 88%.

Group of orthologs #1004. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.knowlesi:97

H3AUB8              	100.00%		B3KZ63              	100.00%
H3AIT2              	40.94%		
H2ZWP4              	10.55%		
Bootstrap support for H3AUB8 as seed ortholog is 100%.
Bootstrap support for B3KZ63 as seed ortholog is 100%.

Group of orthologs #1005. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.knowlesi:97

H2ZTX4              	100.00%		B3L0C4              	100.00%
Bootstrap support for H2ZTX4 as seed ortholog is 100%.
Bootstrap support for B3L0C4 as seed ortholog is 100%.

Group of orthologs #1006. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.knowlesi:97

H3ALW7              	100.00%		B3LAG4              	100.00%
Bootstrap support for H3ALW7 as seed ortholog is 100%.
Bootstrap support for B3LAG4 as seed ortholog is 100%.

Group of orthologs #1007. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.knowlesi:97

H3AUA2              	100.00%		B3L782              	100.00%
Bootstrap support for H3AUA2 as seed ortholog is 100%.
Bootstrap support for B3L782 as seed ortholog is 100%.

Group of orthologs #1008. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.knowlesi:97

H3B9Z7              	100.00%		B3L3D9              	100.00%
Bootstrap support for H3B9Z7 as seed ortholog is 100%.
Bootstrap support for B3L3D9 as seed ortholog is 100%.

Group of orthologs #1009. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.knowlesi:96

H3A3Z2              	100.00%		B3L1Y0              	100.00%
Bootstrap support for H3A3Z2 as seed ortholog is 100%.
Bootstrap support for B3L1Y0 as seed ortholog is 100%.

Group of orthologs #1010. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.knowlesi:96

H3A9Z4              	100.00%		B3L4A2              	100.00%
Bootstrap support for H3A9Z4 as seed ortholog is 100%.
Bootstrap support for B3L4A2 as seed ortholog is 100%.

Group of orthologs #1011. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:22 P.knowlesi:96

H3AA05              	100.00%		B3LBK8              	100.00%
Bootstrap support for H3AA05 as seed ortholog is 74%.
Alternative seed ortholog is H3AMQ6 (22 bits away from this cluster)
Bootstrap support for B3LBK8 as seed ortholog is 100%.

Group of orthologs #1012. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.knowlesi:96

H3AJL0              	100.00%		B3LD89              	100.00%
Bootstrap support for H3AJL0 as seed ortholog is 100%.
Bootstrap support for B3LD89 as seed ortholog is 100%.

Group of orthologs #1013. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.knowlesi:96

H3AS08              	100.00%		B3LD71              	100.00%
Bootstrap support for H3AS08 as seed ortholog is 100%.
Bootstrap support for B3LD71 as seed ortholog is 100%.

Group of orthologs #1014. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.knowlesi:96

H3B591              	100.00%		B3L321              	100.00%
Bootstrap support for H3B591 as seed ortholog is 100%.
Bootstrap support for B3L321 as seed ortholog is 100%.

Group of orthologs #1015. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.knowlesi:96

H3BC87              	100.00%		B3L0G5              	100.00%
Bootstrap support for H3BC87 as seed ortholog is 100%.
Bootstrap support for B3L0G5 as seed ortholog is 100%.

Group of orthologs #1016. Best score 95 bits
Score difference with first non-orthologous sequence - L.chalumnae:31 P.knowlesi:95

H3A801              	100.00%		B3L1E4              	100.00%
H3B3A5              	7.98%		
Bootstrap support for H3A801 as seed ortholog is 97%.
Bootstrap support for B3L1E4 as seed ortholog is 100%.

Group of orthologs #1017. Best score 95 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 P.knowlesi:95

H3BGG5              	100.00%		B3L4R7              	100.00%
H3BG22              	12.67%		
Bootstrap support for H3BGG5 as seed ortholog is 100%.
Bootstrap support for B3L4R7 as seed ortholog is 100%.

Group of orthologs #1018. Best score 95 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 P.knowlesi:95

H2ZSV5              	100.00%		B3L571              	100.00%
Bootstrap support for H2ZSV5 as seed ortholog is 100%.
Bootstrap support for B3L571 as seed ortholog is 100%.

Group of orthologs #1019. Best score 95 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 P.knowlesi:95

H3A9W2              	100.00%		B3LBX2              	100.00%
Bootstrap support for H3A9W2 as seed ortholog is 100%.
Bootstrap support for B3LBX2 as seed ortholog is 100%.

Group of orthologs #1020. Best score 95 bits
Score difference with first non-orthologous sequence - L.chalumnae:17 P.knowlesi:95

H3AK23              	100.00%		B3L513              	100.00%
Bootstrap support for H3AK23 as seed ortholog is 64%.
Alternative seed ortholog is H3B581 (17 bits away from this cluster)
Bootstrap support for B3L513 as seed ortholog is 100%.

Group of orthologs #1021. Best score 95 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 P.knowlesi:95

H3BFY3              	100.00%		B3L4N9              	100.00%
Bootstrap support for H3BFY3 as seed ortholog is 100%.
Bootstrap support for B3L4N9 as seed ortholog is 100%.

Group of orthologs #1022. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.knowlesi:94

H3B6R1              	100.00%		B3L9A5              	100.00%
H2ZT11              	79.41%		
H3BBU5              	41.23%		
Bootstrap support for H3B6R1 as seed ortholog is 100%.
Bootstrap support for B3L9A5 as seed ortholog is 100%.

Group of orthologs #1023. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.knowlesi:94

H3A5C2              	100.00%		B3L6G0              	100.00%
Bootstrap support for H3A5C2 as seed ortholog is 100%.
Bootstrap support for B3L6G0 as seed ortholog is 100%.

Group of orthologs #1024. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.knowlesi:94

H3A5H3              	100.00%		B3L7B9              	100.00%
Bootstrap support for H3A5H3 as seed ortholog is 100%.
Bootstrap support for B3L7B9 as seed ortholog is 100%.

Group of orthologs #1025. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.knowlesi:94

H3AAL7              	100.00%		B3LCG3              	100.00%
Bootstrap support for H3AAL7 as seed ortholog is 100%.
Bootstrap support for B3LCG3 as seed ortholog is 100%.

Group of orthologs #1026. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.knowlesi:94

H3AL26              	100.00%		B3L6Z8              	100.00%
Bootstrap support for H3AL26 as seed ortholog is 100%.
Bootstrap support for B3L6Z8 as seed ortholog is 100%.

Group of orthologs #1027. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.knowlesi:94

H3B701              	100.00%		B3L5N9              	100.00%
Bootstrap support for H3B701 as seed ortholog is 99%.
Bootstrap support for B3L5N9 as seed ortholog is 100%.

Group of orthologs #1028. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.knowlesi:93

H3AM96              	100.00%		B3L952              	100.00%
H2ZSW4              	48.58%		
H3BDZ9              	15.98%		
H3A4X0              	14.82%		
H3B3E2              	14.05%		
H3B0V9              	11.34%		
H3A4S4              	10.05%		
M3XK36              	9.66%		
H3AKZ8              	9.54%		
H3APQ2              	7.99%		
Bootstrap support for H3AM96 as seed ortholog is 100%.
Bootstrap support for B3L952 as seed ortholog is 100%.

Group of orthologs #1029. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.knowlesi:93

H3AQN7              	100.00%		B3LAD0              	100.00%
H3A7G1              	56.68%		
H3AHI0              	14.44%		
Bootstrap support for H3AQN7 as seed ortholog is 100%.
Bootstrap support for B3LAD0 as seed ortholog is 100%.

Group of orthologs #1030. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.knowlesi:93

H3AIF3              	100.00%		B3L7J5              	100.00%
Bootstrap support for H3AIF3 as seed ortholog is 100%.
Bootstrap support for B3L7J5 as seed ortholog is 100%.

Group of orthologs #1031. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.knowlesi:93

H3AH94              	100.00%		B3L925              	100.00%
Bootstrap support for H3AH94 as seed ortholog is 100%.
Bootstrap support for B3L925 as seed ortholog is 100%.

Group of orthologs #1032. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.knowlesi:93

H3ASE1              	100.00%		B3L2L4              	100.00%
Bootstrap support for H3ASE1 as seed ortholog is 100%.
Bootstrap support for B3L2L4 as seed ortholog is 100%.

Group of orthologs #1033. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.knowlesi:93

H3B675              	100.00%		B3KZI5              	100.00%
Bootstrap support for H3B675 as seed ortholog is 100%.
Bootstrap support for B3KZI5 as seed ortholog is 100%.

Group of orthologs #1034. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.knowlesi:93

H3B6D7              	100.00%		B3LCE8              	100.00%
Bootstrap support for H3B6D7 as seed ortholog is 100%.
Bootstrap support for B3LCE8 as seed ortholog is 100%.

Group of orthologs #1035. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.knowlesi:92

H3AXH9              	100.00%		B3L4I3              	100.00%
H3B2A6              	97.69%		
Bootstrap support for H3AXH9 as seed ortholog is 100%.
Bootstrap support for B3L4I3 as seed ortholog is 100%.

Group of orthologs #1036. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.knowlesi:92

H3BAM5              	100.00%		B3L4J8              	100.00%
Bootstrap support for H3BAM5 as seed ortholog is 100%.
Bootstrap support for B3L4J8 as seed ortholog is 100%.

Group of orthologs #1037. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.knowlesi:92

H3BCD0              	100.00%		B3L8P9              	100.00%
Bootstrap support for H3BCD0 as seed ortholog is 100%.
Bootstrap support for B3L8P9 as seed ortholog is 100%.

Group of orthologs #1038. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.knowlesi:91

M3XL18              	100.00%		B3LDD7              	100.00%
H3ADL4              	43.00%		
H3ABP0              	32.28%		
H3ALU7              	26.52%		
H3AQ35              	25.17%		
H3A1K7              	14.90%		
Bootstrap support for M3XL18 as seed ortholog is 100%.
Bootstrap support for B3LDD7 as seed ortholog is 100%.

Group of orthologs #1039. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.knowlesi:91

H3AFN6              	100.00%		B3LC62              	100.00%
H3AUX5              	36.59%		
Bootstrap support for H3AFN6 as seed ortholog is 100%.
Bootstrap support for B3LC62 as seed ortholog is 100%.

Group of orthologs #1040. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.knowlesi:91

H2ZWR2              	100.00%		B3L2J8              	100.00%
Bootstrap support for H2ZWR2 as seed ortholog is 100%.
Bootstrap support for B3L2J8 as seed ortholog is 100%.

Group of orthologs #1041. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.knowlesi:91

H3BBU9              	100.00%		B3L105              	100.00%
Bootstrap support for H3BBU9 as seed ortholog is 100%.
Bootstrap support for B3L105 as seed ortholog is 100%.

Group of orthologs #1042. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.knowlesi:90

H3ATB2              	100.00%		B3L4Q6              	100.00%
H3BA60              	18.64%		
Bootstrap support for H3ATB2 as seed ortholog is 100%.
Bootstrap support for B3L4Q6 as seed ortholog is 100%.

Group of orthologs #1043. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.knowlesi:90

H3ASQ1              	100.00%		B3L3V9              	100.00%
Bootstrap support for H3ASQ1 as seed ortholog is 100%.
Bootstrap support for B3L3V9 as seed ortholog is 100%.

Group of orthologs #1044. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.knowlesi:49

H3B334              	100.00%		B3LAV0              	100.00%
Bootstrap support for H3B334 as seed ortholog is 100%.
Bootstrap support for B3LAV0 as seed ortholog is 98%.

Group of orthologs #1045. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.knowlesi:90

H3B380              	100.00%		B3LB32              	100.00%
Bootstrap support for H3B380 as seed ortholog is 100%.
Bootstrap support for B3LB32 as seed ortholog is 100%.

Group of orthologs #1046. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.knowlesi:89

H3A9H8              	100.00%		B3KZM7              	100.00%
H3A752              	100.00%		B3KZM6              	100.00%
H2ZTV7              	45.04%		B3L5A6              	6.67%
H3AQD8              	24.12%		
Bootstrap support for H3A9H8 as seed ortholog is 100%.
Bootstrap support for H3A752 as seed ortholog is 100%.
Bootstrap support for B3KZM7 as seed ortholog is 100%.
Bootstrap support for B3KZM6 as seed ortholog is 100%.

Group of orthologs #1047. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.knowlesi:89

H3A6G0              	100.00%		B3LD76              	100.00%
H3A8N3              	69.32%		
H3AHT6              	55.46%		
Bootstrap support for H3A6G0 as seed ortholog is 100%.
Bootstrap support for B3LD76 as seed ortholog is 100%.

Group of orthologs #1048. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.knowlesi:40

H3AM06              	100.00%		B3L2U6              	100.00%
M3XK16              	72.11%		
H3A0Z3              	46.94%		
Bootstrap support for H3AM06 as seed ortholog is 100%.
Bootstrap support for B3L2U6 as seed ortholog is 97%.

Group of orthologs #1049. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.knowlesi:89

H2ZXJ0              	100.00%		B3KZI0              	100.00%
Bootstrap support for H2ZXJ0 as seed ortholog is 100%.
Bootstrap support for B3KZI0 as seed ortholog is 100%.

Group of orthologs #1050. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.knowlesi:89

H3A5B6              	100.00%		B3L4P1              	100.00%
Bootstrap support for H3A5B6 as seed ortholog is 100%.
Bootstrap support for B3L4P1 as seed ortholog is 100%.

Group of orthologs #1051. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.knowlesi:89

H3A5B8              	100.00%		B3LBQ3              	100.00%
Bootstrap support for H3A5B8 as seed ortholog is 100%.
Bootstrap support for B3LBQ3 as seed ortholog is 100%.

Group of orthologs #1052. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.knowlesi:89

H3ADW1              	100.00%		B3L8Y5              	100.00%
Bootstrap support for H3ADW1 as seed ortholog is 100%.
Bootstrap support for B3L8Y5 as seed ortholog is 100%.

Group of orthologs #1053. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.knowlesi:89

H3AHB8              	100.00%		B3L6D1              	100.00%
Bootstrap support for H3AHB8 as seed ortholog is 100%.
Bootstrap support for B3L6D1 as seed ortholog is 100%.

Group of orthologs #1054. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.knowlesi:89

H3APQ3              	100.00%		B3L0Z6              	100.00%
Bootstrap support for H3APQ3 as seed ortholog is 100%.
Bootstrap support for B3L0Z6 as seed ortholog is 100%.

Group of orthologs #1055. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.knowlesi:88

H3AYZ5              	100.00%		B3L379              	100.00%
Bootstrap support for H3AYZ5 as seed ortholog is 100%.
Bootstrap support for B3L379 as seed ortholog is 100%.

Group of orthologs #1056. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.knowlesi:88

H3B9L3              	100.00%		B3L262              	100.00%
Bootstrap support for H3B9L3 as seed ortholog is 100%.
Bootstrap support for B3L262 as seed ortholog is 100%.

Group of orthologs #1057. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.knowlesi:10

H3BI16              	100.00%		B3LCU7              	100.00%
Bootstrap support for H3BI16 as seed ortholog is 100%.
Bootstrap support for B3LCU7 as seed ortholog is 56%.
Alternative seed ortholog is B3L1W2 (10 bits away from this cluster)

Group of orthologs #1058. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:30 P.knowlesi:86

H3APW6              	100.00%		B3L9U0              	100.00%
H3B037              	100.00%		B3LBA8              	100.00%
H3AYK9              	41.67%		
Bootstrap support for H3APW6 as seed ortholog is 86%.
Bootstrap support for H3B037 as seed ortholog is 87%.
Bootstrap support for B3L9U0 as seed ortholog is 100%.
Bootstrap support for B3LBA8 as seed ortholog is 100%.

Group of orthologs #1059. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.knowlesi:86

H3A7J2              	100.00%		B3L6L2              	100.00%
H3B2A1              	100.00%		
H3AXG1              	70.27%		
Bootstrap support for H3A7J2 as seed ortholog is 100%.
Bootstrap support for H3B2A1 as seed ortholog is 100%.
Bootstrap support for B3L6L2 as seed ortholog is 100%.

Group of orthologs #1060. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.knowlesi:86

H3B4E6              	100.00%		B3L5X8              	100.00%
H3BEW8              	76.20%		
H3A074              	43.00%		
Bootstrap support for H3B4E6 as seed ortholog is 100%.
Bootstrap support for B3L5X8 as seed ortholog is 100%.

Group of orthologs #1061. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 P.knowlesi:25

H3AKF6              	100.00%		B3L6A4              	100.00%
H3B324              	31.31%		
Bootstrap support for H3AKF6 as seed ortholog is 71%.
Alternative seed ortholog is H3A709 (36 bits away from this cluster)
Bootstrap support for B3L6A4 as seed ortholog is 83%.

Group of orthologs #1062. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.knowlesi:86

H3ASH9              	100.00%		B3L424              	100.00%
Bootstrap support for H3ASH9 as seed ortholog is 100%.
Bootstrap support for B3L424 as seed ortholog is 100%.

Group of orthologs #1063. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.knowlesi:86

H3AYR8              	100.00%		B3L0D1              	100.00%
Bootstrap support for H3AYR8 as seed ortholog is 100%.
Bootstrap support for B3L0D1 as seed ortholog is 100%.

Group of orthologs #1064. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.knowlesi:86

H3BDX1              	100.00%		B3L3V0              	100.00%
Bootstrap support for H3BDX1 as seed ortholog is 100%.
Bootstrap support for B3L3V0 as seed ortholog is 100%.

Group of orthologs #1065. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.knowlesi:86

H3BBN8              	100.00%		B3LAX6              	100.00%
Bootstrap support for H3BBN8 as seed ortholog is 100%.
Bootstrap support for B3LAX6 as seed ortholog is 100%.

Group of orthologs #1066. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.knowlesi:86

M3XIL3              	100.00%		B3LCU0              	100.00%
Bootstrap support for M3XIL3 as seed ortholog is 100%.
Bootstrap support for B3LCU0 as seed ortholog is 100%.

Group of orthologs #1067. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.knowlesi:85

H3BGY7              	100.00%		B3L0P7              	100.00%
H3A4X3              	63.35%		
H3BHM5              	52.54%		
H2ZZF6              	42.58%		
H3A034              	22.25%		
H3B2I3              	15.68%		
H3AGQ3              	15.04%		
H3B0C4              	8.26%		
Bootstrap support for H3BGY7 as seed ortholog is 100%.
Bootstrap support for B3L0P7 as seed ortholog is 100%.

Group of orthologs #1068. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.knowlesi:85

H3A622              	100.00%		B3L591              	100.00%
M3XGL7              	57.89%		
Bootstrap support for H3A622 as seed ortholog is 100%.
Bootstrap support for B3L591 as seed ortholog is 100%.

Group of orthologs #1069. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:30 P.knowlesi:85

H3ABK2              	100.00%		B3L8Z1              	100.00%
H3B4N4              	68.33%		
Bootstrap support for H3ABK2 as seed ortholog is 89%.
Bootstrap support for B3L8Z1 as seed ortholog is 100%.

Group of orthologs #1070. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:2 P.knowlesi:85

H3A667              	100.00%		B3L4Z4              	100.00%
Bootstrap support for H3A667 as seed ortholog is 45%.
Alternative seed ortholog is H2ZY08 (2 bits away from this cluster)
Bootstrap support for B3L4Z4 as seed ortholog is 100%.

Group of orthologs #1071. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.knowlesi:85

H3A569              	100.00%		B3LBN4              	100.00%
Bootstrap support for H3A569 as seed ortholog is 100%.
Bootstrap support for B3LBN4 as seed ortholog is 100%.

Group of orthologs #1072. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.knowlesi:85

H3AIK3              	100.00%		B3L4X9              	100.00%
Bootstrap support for H3AIK3 as seed ortholog is 100%.
Bootstrap support for B3L4X9 as seed ortholog is 100%.

Group of orthologs #1073. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.knowlesi:85

H3AS15              	100.00%		B3KZH5              	100.00%
Bootstrap support for H3AS15 as seed ortholog is 100%.
Bootstrap support for B3KZH5 as seed ortholog is 100%.

Group of orthologs #1074. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.knowlesi:85

H3B312              	100.00%		B3KZ00              	100.00%
Bootstrap support for H3B312 as seed ortholog is 100%.
Bootstrap support for B3KZ00 as seed ortholog is 100%.

Group of orthologs #1075. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.knowlesi:85

H3BDL8              	100.00%		B3KZ26              	100.00%
Bootstrap support for H3BDL8 as seed ortholog is 100%.
Bootstrap support for B3KZ26 as seed ortholog is 100%.

Group of orthologs #1076. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.knowlesi:84

H3A6S0              	100.00%		B3L7U6              	100.00%
H3BDK9              	100.00%		
Bootstrap support for H3A6S0 as seed ortholog is 100%.
Bootstrap support for H3BDK9 as seed ortholog is 100%.
Bootstrap support for B3L7U6 as seed ortholog is 100%.

Group of orthologs #1077. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.knowlesi:84

H3BE28              	100.00%		B3L3A7              	100.00%
H3BAF1              	31.66%		
Bootstrap support for H3BE28 as seed ortholog is 100%.
Bootstrap support for B3L3A7 as seed ortholog is 100%.

Group of orthologs #1078. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.knowlesi:84

H2ZV86              	100.00%		B3L5X3              	100.00%
Bootstrap support for H2ZV86 as seed ortholog is 100%.
Bootstrap support for B3L5X3 as seed ortholog is 100%.

Group of orthologs #1079. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.knowlesi:84

H3ALU6              	100.00%		B3KZH0              	100.00%
Bootstrap support for H3ALU6 as seed ortholog is 100%.
Bootstrap support for B3KZH0 as seed ortholog is 100%.

Group of orthologs #1080. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.knowlesi:84

H3ASL8              	100.00%		B3L1L8              	100.00%
Bootstrap support for H3ASL8 as seed ortholog is 100%.
Bootstrap support for B3L1L8 as seed ortholog is 100%.

Group of orthologs #1081. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.knowlesi:84

H3AUG1              	100.00%		B3L098              	100.00%
Bootstrap support for H3AUG1 as seed ortholog is 100%.
Bootstrap support for B3L098 as seed ortholog is 100%.

Group of orthologs #1082. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.knowlesi:84

H3AXL1              	100.00%		B3KZ24              	100.00%
Bootstrap support for H3AXL1 as seed ortholog is 100%.
Bootstrap support for B3KZ24 as seed ortholog is 100%.

Group of orthologs #1083. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.knowlesi:84

H3AV23              	100.00%		B3L420              	100.00%
Bootstrap support for H3AV23 as seed ortholog is 100%.
Bootstrap support for B3L420 as seed ortholog is 100%.

Group of orthologs #1084. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.knowlesi:84

H3B5P1              	100.00%		B3L4P5              	100.00%
Bootstrap support for H3B5P1 as seed ortholog is 100%.
Bootstrap support for B3L4P5 as seed ortholog is 100%.

Group of orthologs #1085. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.knowlesi:84

H3BAJ8              	100.00%		B3L8M6              	100.00%
Bootstrap support for H3BAJ8 as seed ortholog is 100%.
Bootstrap support for B3L8M6 as seed ortholog is 100%.

Group of orthologs #1086. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.knowlesi:83

H3AJ69              	100.00%		B3L1X5              	100.00%
Bootstrap support for H3AJ69 as seed ortholog is 100%.
Bootstrap support for B3L1X5 as seed ortholog is 100%.

Group of orthologs #1087. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:11 P.knowlesi:16

H3A9G6              	100.00%		B3LD95              	100.00%
Bootstrap support for H3A9G6 as seed ortholog is 60%.
Alternative seed ortholog is M3XLI0 (11 bits away from this cluster)
Bootstrap support for B3LD95 as seed ortholog is 66%.
Alternative seed ortholog is B3L412 (16 bits away from this cluster)

Group of orthologs #1088. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.knowlesi:82

H3BHD1              	100.00%		B3L3D6              	100.00%
M3XGT7              	11.27%		
Bootstrap support for H3BHD1 as seed ortholog is 100%.
Bootstrap support for B3L3D6 as seed ortholog is 100%.

Group of orthologs #1089. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.knowlesi:82

M3XII1              	100.00%		B3LBD7              	100.00%
H3AX58              	31.49%		
Bootstrap support for M3XII1 as seed ortholog is 100%.
Bootstrap support for B3LBD7 as seed ortholog is 100%.

Group of orthologs #1090. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.knowlesi:82

H3A959              	100.00%		B3L1I9              	100.00%
Bootstrap support for H3A959 as seed ortholog is 100%.
Bootstrap support for B3L1I9 as seed ortholog is 100%.

Group of orthologs #1091. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.knowlesi:82

H3A8W3              	100.00%		B3L4M8              	100.00%
Bootstrap support for H3A8W3 as seed ortholog is 100%.
Bootstrap support for B3L4M8 as seed ortholog is 100%.

Group of orthologs #1092. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.knowlesi:82

H3B3V8              	100.00%		B3LCP3              	100.00%
Bootstrap support for H3B3V8 as seed ortholog is 100%.
Bootstrap support for B3LCP3 as seed ortholog is 100%.

Group of orthologs #1093. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.knowlesi:82

H3B923              	100.00%		B3LA94              	100.00%
Bootstrap support for H3B923 as seed ortholog is 100%.
Bootstrap support for B3LA94 as seed ortholog is 100%.

Group of orthologs #1094. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.knowlesi:82

H3BCJ6              	100.00%		B3L7J0              	100.00%
Bootstrap support for H3BCJ6 as seed ortholog is 100%.
Bootstrap support for B3L7J0 as seed ortholog is 100%.

Group of orthologs #1095. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.knowlesi:82

H3BIF8              	100.00%		B3L8S4              	100.00%
Bootstrap support for H3BIF8 as seed ortholog is 100%.
Bootstrap support for B3L8S4 as seed ortholog is 100%.

Group of orthologs #1096. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.knowlesi:26

H3AYM7              	100.00%		B3L7W5              	100.00%
H3AKC0              	79.47%		
H3AAT6              	43.13%		
H2ZYJ9              	19.96%		
Bootstrap support for H3AYM7 as seed ortholog is 100%.
Bootstrap support for B3L7W5 as seed ortholog is 79%.

Group of orthologs #1097. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:8 P.knowlesi:81

M3XHE1              	100.00%		B3L798              	100.00%
H2ZZY5              	54.22%		
H3A7E8              	11.50%		
H3A8H2              	9.39%		
Bootstrap support for M3XHE1 as seed ortholog is 74%.
Alternative seed ortholog is H3B6P2 (8 bits away from this cluster)
Bootstrap support for B3L798 as seed ortholog is 100%.

Group of orthologs #1098. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:14 P.knowlesi:81

H3AUR0              	100.00%		B3L9L7              	100.00%
H2ZWT1              	62.39%		
H3A0M0              	46.79%		
Bootstrap support for H3AUR0 as seed ortholog is 71%.
Alternative seed ortholog is H3B482 (14 bits away from this cluster)
Bootstrap support for B3L9L7 as seed ortholog is 100%.

Group of orthologs #1099. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.knowlesi:81

H2ZYA7              	100.00%		B3L2D8              	100.00%
H2ZS49              	55.70%		
Bootstrap support for H2ZYA7 as seed ortholog is 100%.
Bootstrap support for B3L2D8 as seed ortholog is 100%.

Group of orthologs #1100. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.knowlesi:81

H3AEH4              	100.00%		B3L8L0              	100.00%
H2ZWF4              	80.36%		
Bootstrap support for H3AEH4 as seed ortholog is 100%.
Bootstrap support for B3L8L0 as seed ortholog is 100%.

Group of orthologs #1101. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.knowlesi:81

H2ZWA2              	100.00%		B3L2L8              	100.00%
Bootstrap support for H2ZWA2 as seed ortholog is 100%.
Bootstrap support for B3L2L8 as seed ortholog is 100%.

Group of orthologs #1102. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.knowlesi:81

H3AGY8              	100.00%		B3L901              	100.00%
Bootstrap support for H3AGY8 as seed ortholog is 100%.
Bootstrap support for B3L901 as seed ortholog is 100%.

Group of orthologs #1103. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.knowlesi:81

H3B2X4              	100.00%		B3L5S2              	100.00%
Bootstrap support for H3B2X4 as seed ortholog is 100%.
Bootstrap support for B3L5S2 as seed ortholog is 100%.

Group of orthologs #1104. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 P.knowlesi:81

H3B9V9              	100.00%		B3LAP2              	100.00%
Bootstrap support for H3B9V9 as seed ortholog is 96%.
Bootstrap support for B3LAP2 as seed ortholog is 100%.

Group of orthologs #1105. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.knowlesi:81

H3BGK8              	100.00%		B3L6E3              	100.00%
Bootstrap support for H3BGK8 as seed ortholog is 100%.
Bootstrap support for B3L6E3 as seed ortholog is 100%.

Group of orthologs #1106. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.knowlesi:80

H3BDW4              	100.00%		B3L6I7              	100.00%
H3ARQ4              	59.52%		
H3A9R9              	33.08%		
Bootstrap support for H3BDW4 as seed ortholog is 100%.
Bootstrap support for B3L6I7 as seed ortholog is 100%.

Group of orthologs #1107. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.knowlesi:80

H3A475              	100.00%		B3L160              	100.00%
Bootstrap support for H3A475 as seed ortholog is 100%.
Bootstrap support for B3L160 as seed ortholog is 100%.

Group of orthologs #1108. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.knowlesi:80

H3A8K4              	100.00%		B3L546              	100.00%
Bootstrap support for H3A8K4 as seed ortholog is 100%.
Bootstrap support for B3L546 as seed ortholog is 100%.

Group of orthologs #1109. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.knowlesi:80

H3AYZ6              	100.00%		B3KZZ6              	100.00%
Bootstrap support for H3AYZ6 as seed ortholog is 100%.
Bootstrap support for B3KZZ6 as seed ortholog is 100%.

Group of orthologs #1110. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.knowlesi:80

H3AT77              	100.00%		B3LBL5              	100.00%
Bootstrap support for H3AT77 as seed ortholog is 100%.
Bootstrap support for B3LBL5 as seed ortholog is 100%.

Group of orthologs #1111. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.knowlesi:80

H3AWT3              	100.00%		B3L975              	100.00%
Bootstrap support for H3AWT3 as seed ortholog is 100%.
Bootstrap support for B3L975 as seed ortholog is 100%.

Group of orthologs #1112. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.knowlesi:80

H3BCU1              	100.00%		B3L2Y7              	100.00%
Bootstrap support for H3BCU1 as seed ortholog is 100%.
Bootstrap support for B3L2Y7 as seed ortholog is 100%.

Group of orthologs #1113. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.knowlesi:80

H3BFP8              	100.00%		B3L8Q0              	100.00%
Bootstrap support for H3BFP8 as seed ortholog is 100%.
Bootstrap support for B3L8Q0 as seed ortholog is 100%.

Group of orthologs #1114. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.knowlesi:80

H3BHG0              	100.00%		B3LA45              	100.00%
Bootstrap support for H3BHG0 as seed ortholog is 100%.
Bootstrap support for B3LA45 as seed ortholog is 100%.

Group of orthologs #1115. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.knowlesi:79

H3A1U3              	100.00%		B3LAJ7              	100.00%
Bootstrap support for H3A1U3 as seed ortholog is 100%.
Bootstrap support for B3LAJ7 as seed ortholog is 100%.

Group of orthologs #1116. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.knowlesi:79

H3B875              	100.00%		B3KZ04              	100.00%
Bootstrap support for H3B875 as seed ortholog is 100%.
Bootstrap support for B3KZ04 as seed ortholog is 100%.

Group of orthologs #1117. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.knowlesi:79

H3AXF2              	100.00%		B3L9K6              	100.00%
Bootstrap support for H3AXF2 as seed ortholog is 100%.
Bootstrap support for B3L9K6 as seed ortholog is 100%.

Group of orthologs #1118. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.knowlesi:79

H3B1H8              	100.00%		B3L6W0              	100.00%
Bootstrap support for H3B1H8 as seed ortholog is 100%.
Bootstrap support for B3L6W0 as seed ortholog is 100%.

Group of orthologs #1119. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:8 P.knowlesi:79

H3B4G6              	100.00%		B3LAI5              	100.00%
Bootstrap support for H3B4G6 as seed ortholog is 65%.
Alternative seed ortholog is H3AXL5 (8 bits away from this cluster)
Bootstrap support for B3LAI5 as seed ortholog is 100%.

Group of orthologs #1120. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 P.knowlesi:78

H3AWV9              	100.00%		B3L707              	100.00%
H3B0R7              	37.02%		
M3XHU6              	37.02%		
H3BF21              	33.22%		
Bootstrap support for H3AWV9 as seed ortholog is 93%.
Bootstrap support for B3L707 as seed ortholog is 100%.

Group of orthologs #1121. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.knowlesi:78

H3B8P1              	100.00%		B3L9H6              	100.00%
M3XI03              	58.28%		
Bootstrap support for H3B8P1 as seed ortholog is 100%.
Bootstrap support for B3L9H6 as seed ortholog is 100%.

Group of orthologs #1122. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.knowlesi:27

H3ADG6              	100.00%		B3LAK8              	100.00%
Bootstrap support for H3ADG6 as seed ortholog is 100%.
Bootstrap support for B3LAK8 as seed ortholog is 95%.

Group of orthologs #1123. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.knowlesi:77

H3A1H7              	100.00%		B3L5K4              	100.00%
H2ZYC6              	33.72%		
Bootstrap support for H3A1H7 as seed ortholog is 100%.
Bootstrap support for B3L5K4 as seed ortholog is 100%.

Group of orthologs #1124. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.knowlesi:77

H3ADF7              	100.00%		B3L936              	100.00%
H3B5M9              	58.69%		
Bootstrap support for H3ADF7 as seed ortholog is 100%.
Bootstrap support for B3L936 as seed ortholog is 100%.

Group of orthologs #1125. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.knowlesi:77

H3BAL5              	100.00%		B3L5Z2              	100.00%
H3B824              	70.84%		
Bootstrap support for H3BAL5 as seed ortholog is 100%.
Bootstrap support for B3L5Z2 as seed ortholog is 100%.

Group of orthologs #1126. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.knowlesi:77

H3A055              	100.00%		B3L2G3              	100.00%
Bootstrap support for H3A055 as seed ortholog is 100%.
Bootstrap support for B3L2G3 as seed ortholog is 100%.

Group of orthologs #1127. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.knowlesi:77

H3AAB2              	100.00%		B3L0N5              	100.00%
Bootstrap support for H3AAB2 as seed ortholog is 100%.
Bootstrap support for B3L0N5 as seed ortholog is 100%.

Group of orthologs #1128. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.knowlesi:77

H3A073              	100.00%		B3LA07              	100.00%
Bootstrap support for H3A073 as seed ortholog is 100%.
Bootstrap support for B3LA07 as seed ortholog is 100%.

Group of orthologs #1129. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.knowlesi:77

H3ANW7              	100.00%		B3L743              	100.00%
Bootstrap support for H3ANW7 as seed ortholog is 100%.
Bootstrap support for B3L743 as seed ortholog is 100%.

Group of orthologs #1130. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.knowlesi:77

H3BGE8              	100.00%		B3L9F0              	100.00%
Bootstrap support for H3BGE8 as seed ortholog is 100%.
Bootstrap support for B3L9F0 as seed ortholog is 100%.

Group of orthologs #1131. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.knowlesi:76

H3AJ10              	100.00%		B3LA19              	100.00%
H3A8C5              	50.00%		
Bootstrap support for H3AJ10 as seed ortholog is 100%.
Bootstrap support for B3LA19 as seed ortholog is 100%.

Group of orthologs #1132. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.knowlesi:76

H3AV08              	100.00%		B3L880              	100.00%
H2ZYI6              	37.84%		
Bootstrap support for H3AV08 as seed ortholog is 100%.
Bootstrap support for B3L880 as seed ortholog is 100%.

Group of orthologs #1133. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:25 P.knowlesi:76

H3B418              	100.00%		B3L0T6              	100.00%
Bootstrap support for H3B418 as seed ortholog is 82%.
Bootstrap support for B3L0T6 as seed ortholog is 100%.

Group of orthologs #1134. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.knowlesi:76

H3BEQ0              	100.00%		B3L168              	100.00%
Bootstrap support for H3BEQ0 as seed ortholog is 100%.
Bootstrap support for B3L168 as seed ortholog is 100%.

Group of orthologs #1135. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.knowlesi:76

H3B664              	100.00%		B3L8F0              	100.00%
Bootstrap support for H3B664 as seed ortholog is 100%.
Bootstrap support for B3L8F0 as seed ortholog is 100%.

Group of orthologs #1136. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.knowlesi:76

H3B684              	100.00%		B3LCU9              	100.00%
Bootstrap support for H3B684 as seed ortholog is 100%.
Bootstrap support for B3LCU9 as seed ortholog is 100%.

Group of orthologs #1137. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.knowlesi:75

H3BAU1              	100.00%		B3L4N8              	100.00%
H3B817              	64.44%		
H3A571              	53.18%		
H3B0S6              	21.70%		
H3BH47              	7.99%		
Bootstrap support for H3BAU1 as seed ortholog is 100%.
Bootstrap support for B3L4N8 as seed ortholog is 100%.

Group of orthologs #1138. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.knowlesi:75

H3AA58              	100.00%		B3L3N1              	100.00%
Bootstrap support for H3AA58 as seed ortholog is 100%.
Bootstrap support for B3L3N1 as seed ortholog is 100%.

Group of orthologs #1139. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.knowlesi:75

H3AJB1              	100.00%		B3L7C8              	100.00%
Bootstrap support for H3AJB1 as seed ortholog is 100%.
Bootstrap support for B3L7C8 as seed ortholog is 100%.

Group of orthologs #1140. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.knowlesi:75

H3AL24              	100.00%		B3LCH8              	100.00%
Bootstrap support for H3AL24 as seed ortholog is 100%.
Bootstrap support for B3LCH8 as seed ortholog is 100%.

Group of orthologs #1141. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.knowlesi:75

H3BHD8              	100.00%		B3L0T1              	100.00%
Bootstrap support for H3BHD8 as seed ortholog is 100%.
Bootstrap support for B3L0T1 as seed ortholog is 100%.

Group of orthologs #1142. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.knowlesi:74

H3B3D9              	100.00%		B3LCC5              	100.00%
H3A2I4              	46.32%		
H3AB14              	40.85%		
H3BHW2              	37.20%		
Bootstrap support for H3B3D9 as seed ortholog is 100%.
Bootstrap support for B3LCC5 as seed ortholog is 100%.

Group of orthologs #1143. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.knowlesi:74

H3A8T9              	100.00%		B3L562              	100.00%
                    	       		B3LCD0              	5.89%
                    	       		B3L563              	5.32%
Bootstrap support for H3A8T9 as seed ortholog is 100%.
Bootstrap support for B3L562 as seed ortholog is 100%.

Group of orthologs #1144. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.knowlesi:74

H3A6K0              	100.00%		B3KZK2              	100.00%
H3B6R5              	5.85%		
Bootstrap support for H3A6K0 as seed ortholog is 100%.
Bootstrap support for B3KZK2 as seed ortholog is 100%.

Group of orthologs #1145. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.knowlesi:74

H3AP30              	100.00%		B3L3U8              	100.00%
H3AT33              	17.91%		
Bootstrap support for H3AP30 as seed ortholog is 100%.
Bootstrap support for B3L3U8 as seed ortholog is 100%.

Group of orthologs #1146. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.knowlesi:74

H3B7G8              	100.00%		B3L409              	100.00%
                    	       		B3L3E3              	14.77%
Bootstrap support for H3B7G8 as seed ortholog is 100%.
Bootstrap support for B3L409 as seed ortholog is 100%.

Group of orthologs #1147. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.knowlesi:74

H3B292              	100.00%		B3L9P2              	100.00%
H3B737              	58.23%		
Bootstrap support for H3B292 as seed ortholog is 100%.
Bootstrap support for B3L9P2 as seed ortholog is 100%.

Group of orthologs #1148. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.knowlesi:74

H3AAT5              	100.00%		B3L234              	100.00%
Bootstrap support for H3AAT5 as seed ortholog is 100%.
Bootstrap support for B3L234 as seed ortholog is 100%.

Group of orthologs #1149. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.knowlesi:74

H3BAR7              	100.00%		B3L1K6              	100.00%
Bootstrap support for H3BAR7 as seed ortholog is 100%.
Bootstrap support for B3L1K6 as seed ortholog is 100%.

Group of orthologs #1150. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.knowlesi:74

H3B577              	100.00%		B3LCD3              	100.00%
Bootstrap support for H3B577 as seed ortholog is 100%.
Bootstrap support for B3LCD3 as seed ortholog is 100%.

Group of orthologs #1151. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.knowlesi:74

H3B8I2              	100.00%		B3LCY6              	100.00%
Bootstrap support for H3B8I2 as seed ortholog is 100%.
Bootstrap support for B3LCY6 as seed ortholog is 100%.

Group of orthologs #1152. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 P.knowlesi:73

H3ADU3              	100.00%		B3L8D6              	100.00%
Bootstrap support for H3ADU3 as seed ortholog is 100%.
Bootstrap support for B3L8D6 as seed ortholog is 100%.

Group of orthologs #1153. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 P.knowlesi:73

H3B323              	100.00%		B3LBX5              	100.00%
Bootstrap support for H3B323 as seed ortholog is 100%.
Bootstrap support for B3LBX5 as seed ortholog is 100%.

Group of orthologs #1154. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:7 P.knowlesi:72

H3AT40              	100.00%		B3L0D7              	100.00%
H3BDM1              	31.13%		B3L8G2              	5.61%
H3APG9              	27.64%		
H3A3G3              	25.85%		
H3A0D5              	25.40%		
H3AVG6              	24.15%		
H3AIP0              	22.18%		
H3ADM7              	20.75%		
H3AGZ5              	19.05%		
H3B9Y4              	17.26%		
H2ZUD1              	16.91%		
H2ZWD1              	15.47%		
H3ATV3              	14.67%		
H3AZ24              	13.42%		
H3B1V6              	12.79%		
H3BBG0              	12.25%		
H3AD35              	12.16%		
H2ZXI2              	12.08%		
H3BAZ1              	12.08%		
H3AKT0              	11.99%		
H3AAN5              	11.54%		
H3B7U6              	11.27%		
H2ZZI5              	10.38%		
H3B5B1              	10.38%		
H3AG78              	10.20%		
H2ZW75              	9.48%		
H3AR09              	9.39%		
H3A1P2              	9.21%		
H3AV36              	9.12%		
H3ARJ0              	8.94%		
H3AAM7              	8.50%		
H2ZZ26              	8.32%		
H3ALM0              	8.32%		
H3ATJ6              	8.14%		
H3A0W3              	7.69%		
H3ACG4              	7.07%		
H3AW47              	6.98%		
H3AEZ8              	6.44%		
H3ASU1              	6.35%		
H3AQ92              	6.26%		
H3AZY7              	5.99%		
H3AG73              	5.90%		
H3BC68              	5.55%		
H3A090              	5.37%		
Bootstrap support for H3AT40 as seed ortholog is 59%.
Alternative seed ortholog is H3AK00 (7 bits away from this cluster)
Bootstrap support for B3L0D7 as seed ortholog is 100%.

Group of orthologs #1155. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.knowlesi:72

H3AAA2              	100.00%		B3L4J3              	100.00%
H2ZSY8              	42.28%		
Bootstrap support for H3AAA2 as seed ortholog is 100%.
Bootstrap support for B3L4J3 as seed ortholog is 100%.

Group of orthologs #1156. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.knowlesi:72

H3A5U6              	100.00%		B3LCF8              	100.00%
Bootstrap support for H3A5U6 as seed ortholog is 100%.
Bootstrap support for B3LCF8 as seed ortholog is 100%.

Group of orthologs #1157. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.knowlesi:72

H3BCW8              	100.00%		B3L027              	100.00%
Bootstrap support for H3BCW8 as seed ortholog is 100%.
Bootstrap support for B3L027 as seed ortholog is 100%.

Group of orthologs #1158. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.knowlesi:72

M3XJF6              	100.00%		B3L7P4              	100.00%
Bootstrap support for M3XJF6 as seed ortholog is 100%.
Bootstrap support for B3L7P4 as seed ortholog is 100%.

Group of orthologs #1159. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.knowlesi:71

H3BE21              	100.00%		B3L945              	100.00%
H3A6G7              	12.81%		
H3A5I1              	12.17%		
H3BG44              	12.07%		
H3AYL5              	10.23%		
H3AX38              	10.14%		
H3A115              	9.40%		
H3B3L2              	7.65%		
M3XJF0              	6.08%		
H3AN20              	5.62%		
Bootstrap support for H3BE21 as seed ortholog is 100%.
Bootstrap support for B3L945 as seed ortholog is 100%.

Group of orthologs #1160. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.knowlesi:71

H3AXX2              	100.00%		B3L5P5              	100.00%
H3AIG3              	88.66%		
Bootstrap support for H3AXX2 as seed ortholog is 100%.
Bootstrap support for B3L5P5 as seed ortholog is 100%.

Group of orthologs #1161. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.knowlesi:71

H3BF47              	100.00%		B3L9G1              	100.00%
H3BH27              	100.00%		
Bootstrap support for H3BF47 as seed ortholog is 100%.
Bootstrap support for H3BH27 as seed ortholog is 100%.
Bootstrap support for B3L9G1 as seed ortholog is 100%.

Group of orthologs #1162. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.knowlesi:71

H3ASA1              	100.00%		B3L2U1              	100.00%
Bootstrap support for H3ASA1 as seed ortholog is 100%.
Bootstrap support for B3L2U1 as seed ortholog is 100%.

Group of orthologs #1163. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.knowlesi:71

H3BEQ3              	100.00%		B3KZS8              	100.00%
Bootstrap support for H3BEQ3 as seed ortholog is 100%.
Bootstrap support for B3KZS8 as seed ortholog is 100%.

Group of orthologs #1164. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.knowlesi:71

H3BAG0              	100.00%		B3L810              	100.00%
Bootstrap support for H3BAG0 as seed ortholog is 100%.
Bootstrap support for B3L810 as seed ortholog is 100%.

Group of orthologs #1165. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 P.knowlesi:70

H3B4D6              	100.00%		B3KZU6              	100.00%
H3B2Z3              	14.15%		
H3B366              	9.02%		
Bootstrap support for H3B4D6 as seed ortholog is 100%.
Bootstrap support for B3KZU6 as seed ortholog is 100%.

Group of orthologs #1166. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 P.knowlesi:70

H2ZYB4              	100.00%		B3L987              	100.00%
Bootstrap support for H2ZYB4 as seed ortholog is 100%.
Bootstrap support for B3L987 as seed ortholog is 100%.

Group of orthologs #1167. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 P.knowlesi:70

H3AWR8              	100.00%		B3L3A5              	100.00%
Bootstrap support for H3AWR8 as seed ortholog is 100%.
Bootstrap support for B3L3A5 as seed ortholog is 100%.

Group of orthologs #1168. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:11 P.knowlesi:69

H3ATY9              	100.00%		B3L809              	100.00%
H3BAX0              	62.15%		
H3AYL2              	54.42%		
Bootstrap support for H3ATY9 as seed ortholog is 57%.
Alternative seed ortholog is H3BDS5 (11 bits away from this cluster)
Bootstrap support for B3L809 as seed ortholog is 100%.

Group of orthologs #1169. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.knowlesi:19

H2ZY96              	100.00%		B3LC65              	100.00%
H2ZUT5              	30.77%		
Bootstrap support for H2ZY96 as seed ortholog is 100%.
Bootstrap support for B3LC65 as seed ortholog is 73%.
Alternative seed ortholog is B3L8D3 (19 bits away from this cluster)

Group of orthologs #1170. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.knowlesi:69

H3A9L9              	100.00%		B3L5D7              	100.00%
Bootstrap support for H3A9L9 as seed ortholog is 100%.
Bootstrap support for B3L5D7 as seed ortholog is 100%.

Group of orthologs #1171. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.knowlesi:69

H3AJV4              	100.00%		B3L389              	100.00%
Bootstrap support for H3AJV4 as seed ortholog is 100%.
Bootstrap support for B3L389 as seed ortholog is 100%.

Group of orthologs #1172. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.knowlesi:69

H3AF80              	100.00%		B3LAX3              	100.00%
Bootstrap support for H3AF80 as seed ortholog is 100%.
Bootstrap support for B3LAX3 as seed ortholog is 100%.

Group of orthologs #1173. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.knowlesi:69

H3AP79              	100.00%		B3L5Q8              	100.00%
Bootstrap support for H3AP79 as seed ortholog is 100%.
Bootstrap support for B3L5Q8 as seed ortholog is 100%.

Group of orthologs #1174. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.knowlesi:69

H3B8C0              	100.00%		B3L7T3              	100.00%
Bootstrap support for H3B8C0 as seed ortholog is 100%.
Bootstrap support for B3L7T3 as seed ortholog is 100%.

Group of orthologs #1175. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.knowlesi:69

H3BDW3              	100.00%		B3LB83              	100.00%
Bootstrap support for H3BDW3 as seed ortholog is 100%.
Bootstrap support for B3LB83 as seed ortholog is 100%.

Group of orthologs #1176. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.knowlesi:69

M3XLH6              	100.00%		B3L4R0              	100.00%
Bootstrap support for M3XLH6 as seed ortholog is 100%.
Bootstrap support for B3L4R0 as seed ortholog is 100%.

Group of orthologs #1177. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.knowlesi:68

H3AUF1              	100.00%		B3KZ43              	100.00%
                    	       		B3KZ42              	40.81%
                    	       		B3L336              	39.67%
                    	       		B3L0Y4              	38.66%
                    	       		B3L1R3              	35.61%
                    	       		B3L8U5              	9.25%
Bootstrap support for H3AUF1 as seed ortholog is 100%.
Bootstrap support for B3KZ43 as seed ortholog is 100%.

Group of orthologs #1178. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.knowlesi:68

H3A555              	100.00%		B3L3K1              	100.00%
Bootstrap support for H3A555 as seed ortholog is 100%.
Bootstrap support for B3L3K1 as seed ortholog is 100%.

Group of orthologs #1179. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.knowlesi:68

H3BBL8              	100.00%		B3L5I9              	100.00%
Bootstrap support for H3BBL8 as seed ortholog is 100%.
Bootstrap support for B3L5I9 as seed ortholog is 100%.

Group of orthologs #1180. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.knowlesi:68

H3BA32              	100.00%		B3L8I8              	100.00%
Bootstrap support for H3BA32 as seed ortholog is 100%.
Bootstrap support for B3L8I8 as seed ortholog is 100%.

Group of orthologs #1181. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.knowlesi:67

H3BC02              	100.00%		B3LBV9              	100.00%
H3AZX2              	15.06%		
H3A0P5              	10.51%		
H3B3B3              	5.40%		
Bootstrap support for H3BC02 as seed ortholog is 100%.
Bootstrap support for B3LBV9 as seed ortholog is 100%.

Group of orthologs #1182. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.knowlesi:67

H3ACG9              	100.00%		B3L9L8              	100.00%
H3BDT2              	50.78%		
Bootstrap support for H3ACG9 as seed ortholog is 100%.
Bootstrap support for B3L9L8 as seed ortholog is 100%.

Group of orthologs #1183. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.knowlesi:67

H3B4D7              	100.00%		B3L3F4              	100.00%
H3AZU0              	55.43%		
Bootstrap support for H3B4D7 as seed ortholog is 100%.
Bootstrap support for B3L3F4 as seed ortholog is 100%.

Group of orthologs #1184. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.knowlesi:67

H3BG51              	100.00%		B3L3P7              	100.00%
H3AY81              	42.40%		
Bootstrap support for H3BG51 as seed ortholog is 100%.
Bootstrap support for B3L3P7 as seed ortholog is 100%.

Group of orthologs #1185. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.knowlesi:67

H3A3M1              	100.00%		B3L8Z6              	100.00%
Bootstrap support for H3A3M1 as seed ortholog is 100%.
Bootstrap support for B3L8Z6 as seed ortholog is 100%.

Group of orthologs #1186. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.knowlesi:67

H3AA97              	100.00%		B3LBN2              	100.00%
Bootstrap support for H3AA97 as seed ortholog is 100%.
Bootstrap support for B3LBN2 as seed ortholog is 100%.

Group of orthologs #1187. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.knowlesi:67

H3AU07              	100.00%		B3L9H2              	100.00%
Bootstrap support for H3AU07 as seed ortholog is 100%.
Bootstrap support for B3L9H2 as seed ortholog is 100%.

Group of orthologs #1188. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.knowlesi:67

H3B6N8              	100.00%		B3L0K9              	100.00%
Bootstrap support for H3B6N8 as seed ortholog is 100%.
Bootstrap support for B3L0K9 as seed ortholog is 100%.

Group of orthologs #1189. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.knowlesi:66

H3B5Q9              	100.00%		B3KZ73              	100.00%
H3BI65              	60.52%		
H3AG90              	41.37%		
Bootstrap support for H3B5Q9 as seed ortholog is 100%.
Bootstrap support for B3KZ73 as seed ortholog is 100%.

Group of orthologs #1190. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.knowlesi:66

H3ACX7              	100.00%		B3L4R1              	100.00%
Bootstrap support for H3ACX7 as seed ortholog is 100%.
Bootstrap support for B3L4R1 as seed ortholog is 100%.

Group of orthologs #1191. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.knowlesi:66

H3BCJ8              	100.00%		B3L0U6              	100.00%
Bootstrap support for H3BCJ8 as seed ortholog is 100%.
Bootstrap support for B3L0U6 as seed ortholog is 100%.

Group of orthologs #1192. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.knowlesi:66

M3XJ13              	100.00%		B3L354              	100.00%
Bootstrap support for M3XJ13 as seed ortholog is 100%.
Bootstrap support for B3L354 as seed ortholog is 100%.

Group of orthologs #1193. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.knowlesi:66

H3BIR9              	100.00%		B3LA36              	100.00%
Bootstrap support for H3BIR9 as seed ortholog is 100%.
Bootstrap support for B3LA36 as seed ortholog is 100%.

Group of orthologs #1194. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.knowlesi:66

M3XJR6              	100.00%		B3LBF8              	100.00%
Bootstrap support for M3XJR6 as seed ortholog is 100%.
Bootstrap support for B3LBF8 as seed ortholog is 100%.

Group of orthologs #1195. Best score 65 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.knowlesi:65

H2ZX57              	100.00%		B3LA73              	100.00%
H3ABD5              	51.41%		
H3AA30              	16.41%		
H3AMX9              	15.31%		
M3XII0              	13.28%		
Bootstrap support for H2ZX57 as seed ortholog is 100%.
Bootstrap support for B3LA73 as seed ortholog is 100%.

Group of orthologs #1196. Best score 65 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.knowlesi:65

H3BBW7              	100.00%		B3LD62              	100.00%
H3A722              	20.62%		
Bootstrap support for H3BBW7 as seed ortholog is 100%.
Bootstrap support for B3LD62 as seed ortholog is 100%.

Group of orthologs #1197. Best score 65 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.knowlesi:65

H3A1U1              	100.00%		B3L872              	100.00%
Bootstrap support for H3A1U1 as seed ortholog is 100%.
Bootstrap support for B3L872 as seed ortholog is 100%.

Group of orthologs #1198. Best score 65 bits
Score difference with first non-orthologous sequence - L.chalumnae:20 P.knowlesi:65

H3A934              	100.00%		B3L6A9              	100.00%
Bootstrap support for H3A934 as seed ortholog is 88%.
Bootstrap support for B3L6A9 as seed ortholog is 100%.

Group of orthologs #1199. Best score 65 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.knowlesi:65

H3AAH0              	100.00%		B3LBE0              	100.00%
Bootstrap support for H3AAH0 as seed ortholog is 100%.
Bootstrap support for B3LBE0 as seed ortholog is 100%.

Group of orthologs #1200. Best score 65 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.knowlesi:65

H3BIC3              	100.00%		B3LCQ8              	100.00%
Bootstrap support for H3BIC3 as seed ortholog is 100%.
Bootstrap support for B3LCQ8 as seed ortholog is 100%.

Group of orthologs #1201. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.knowlesi:64

H3APA5              	100.00%		B3L7G0              	100.00%
H3BCB4              	31.60%		B3L7F9              	18.25%
M3XKC2              	30.98%		
H3A3E1              	25.40%		
Bootstrap support for H3APA5 as seed ortholog is 100%.
Bootstrap support for B3L7G0 as seed ortholog is 100%.

Group of orthologs #1202. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.knowlesi:64

H3A677              	100.00%		B3LCE6              	100.00%
H3B4W3              	23.58%		
Bootstrap support for H3A677 as seed ortholog is 100%.
Bootstrap support for B3LCE6 as seed ortholog is 100%.

Group of orthologs #1203. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.knowlesi:64

H2ZRU6              	100.00%		B3L4D3              	100.00%
Bootstrap support for H2ZRU6 as seed ortholog is 100%.
Bootstrap support for B3L4D3 as seed ortholog is 100%.

Group of orthologs #1204. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.knowlesi:64

H2ZYQ9              	100.00%		B3L0T5              	100.00%
Bootstrap support for H2ZYQ9 as seed ortholog is 100%.
Bootstrap support for B3L0T5 as seed ortholog is 100%.

Group of orthologs #1205. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.knowlesi:64

H3A0F6              	100.00%		B3LBG4              	100.00%
Bootstrap support for H3A0F6 as seed ortholog is 100%.
Bootstrap support for B3LBG4 as seed ortholog is 100%.

Group of orthologs #1206. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.knowlesi:64

H3AA50              	100.00%		B3L4Q8              	100.00%
Bootstrap support for H3AA50 as seed ortholog is 100%.
Bootstrap support for B3L4Q8 as seed ortholog is 100%.

Group of orthologs #1207. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.knowlesi:64

H3ARZ6              	100.00%		B3L953              	100.00%
Bootstrap support for H3ARZ6 as seed ortholog is 100%.
Bootstrap support for B3L953 as seed ortholog is 100%.

Group of orthologs #1208. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.knowlesi:64

H3B2M9              	100.00%		B3L355              	100.00%
Bootstrap support for H3B2M9 as seed ortholog is 100%.
Bootstrap support for B3L355 as seed ortholog is 100%.

Group of orthologs #1209. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.knowlesi:64

H3AVZ7              	100.00%		B3L902              	100.00%
Bootstrap support for H3AVZ7 as seed ortholog is 100%.
Bootstrap support for B3L902 as seed ortholog is 100%.

Group of orthologs #1210. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.knowlesi:64

H3B650              	100.00%		B3LA32              	100.00%
Bootstrap support for H3B650 as seed ortholog is 100%.
Bootstrap support for B3LA32 as seed ortholog is 100%.

Group of orthologs #1211. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.knowlesi:64

H3BH15              	100.00%		B3L493              	100.00%
Bootstrap support for H3BH15 as seed ortholog is 100%.
Bootstrap support for B3L493 as seed ortholog is 100%.

Group of orthologs #1212. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.knowlesi:63

H3AU00              	100.00%		B3KZ06              	100.00%
H3ADZ4              	74.26%		
H3B9E9              	66.83%		
Bootstrap support for H3AU00 as seed ortholog is 100%.
Bootstrap support for B3KZ06 as seed ortholog is 100%.

Group of orthologs #1213. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.knowlesi:63

H3AII5              	100.00%		B3LBF3              	100.00%
Bootstrap support for H3AII5 as seed ortholog is 100%.
Bootstrap support for B3LBF3 as seed ortholog is 100%.

Group of orthologs #1214. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.knowlesi:62

H3BBF8              	100.00%		B3L5A8              	100.00%
H3BEF3              	78.72%		
Bootstrap support for H3BBF8 as seed ortholog is 100%.
Bootstrap support for B3L5A8 as seed ortholog is 100%.

Group of orthologs #1215. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.knowlesi:62

H2ZXI0              	100.00%		B3L636              	100.00%
Bootstrap support for H2ZXI0 as seed ortholog is 100%.
Bootstrap support for B3L636 as seed ortholog is 100%.

Group of orthologs #1216. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.knowlesi:62

H3AMH8              	100.00%		B3L7N6              	100.00%
Bootstrap support for H3AMH8 as seed ortholog is 100%.
Bootstrap support for B3L7N6 as seed ortholog is 100%.

Group of orthologs #1217. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.knowlesi:62

H3B787              	100.00%		B3LA74              	100.00%
Bootstrap support for H3B787 as seed ortholog is 100%.
Bootstrap support for B3LA74 as seed ortholog is 100%.

Group of orthologs #1218. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.knowlesi:61

H3AT45              	100.00%		B3L0Q1              	100.00%
H2ZXI5              	22.26%		B3L2T0              	13.84%
H3ACA2              	17.89%		
M3XGT4              	15.79%		
H3B110              	15.03%		
H3AZL0              	14.75%		
M3XGH9              	14.56%		
H3BAC9              	13.80%		
H3ACZ0              	13.23%		
H3ABY4              	12.46%		
H3ABV4              	12.37%		
H3AE46              	12.08%		
H3ATQ8              	11.89%		
H3AE86              	11.13%		
H3BBN2              	10.94%		
H3ASF4              	10.66%		
Bootstrap support for H3AT45 as seed ortholog is 100%.
Bootstrap support for B3L0Q1 as seed ortholog is 100%.

Group of orthologs #1219. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.knowlesi:61

H2ZZD8              	100.00%		B3LB73              	100.00%
Bootstrap support for H2ZZD8 as seed ortholog is 100%.
Bootstrap support for B3LB73 as seed ortholog is 100%.

Group of orthologs #1220. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.knowlesi:61

H3AKI6              	100.00%		B3L289              	100.00%
Bootstrap support for H3AKI6 as seed ortholog is 100%.
Bootstrap support for B3L289 as seed ortholog is 100%.

Group of orthologs #1221. Best score 60 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.knowlesi:60

H3AEW2              	100.00%		B3L7D3              	100.00%
Bootstrap support for H3AEW2 as seed ortholog is 100%.
Bootstrap support for B3L7D3 as seed ortholog is 100%.

Group of orthologs #1222. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.knowlesi:59

M3XL91              	100.00%		B3L3K0              	100.00%
H3AUZ6              	69.21%		
Bootstrap support for M3XL91 as seed ortholog is 100%.
Bootstrap support for B3L3K0 as seed ortholog is 100%.

Group of orthologs #1223. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.knowlesi:59

H2ZV02              	100.00%		B3KZ84              	100.00%
Bootstrap support for H2ZV02 as seed ortholog is 100%.
Bootstrap support for B3KZ84 as seed ortholog is 100%.

Group of orthologs #1224. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.knowlesi:59

H3A573              	100.00%		B3L9B6              	100.00%
Bootstrap support for H3A573 as seed ortholog is 100%.
Bootstrap support for B3L9B6 as seed ortholog is 100%.

Group of orthologs #1225. Best score 58 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.knowlesi:58

H3AMB0              	100.00%		B3L110              	100.00%
H3ALQ4              	100.00%		B3L4U2              	100.00%
H3B9Q0              	59.27%		
Bootstrap support for H3AMB0 as seed ortholog is 100%.
Bootstrap support for H3ALQ4 as seed ortholog is 100%.
Bootstrap support for B3L110 as seed ortholog is 100%.
Bootstrap support for B3L4U2 as seed ortholog is 100%.

Group of orthologs #1226. Best score 58 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.knowlesi:58

H3B4Q8              	100.00%		B3LBV3              	100.00%
H3B2G4              	13.42%		
Bootstrap support for H3B4Q8 as seed ortholog is 100%.
Bootstrap support for B3LBV3 as seed ortholog is 100%.

Group of orthologs #1227. Best score 58 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.knowlesi:58

H2ZW20              	100.00%		B3L525              	100.00%
Bootstrap support for H2ZW20 as seed ortholog is 100%.
Bootstrap support for B3L525 as seed ortholog is 100%.

Group of orthologs #1228. Best score 58 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.knowlesi:58

H2ZXG7              	100.00%		B3L9P5              	100.00%
Bootstrap support for H2ZXG7 as seed ortholog is 100%.
Bootstrap support for B3L9P5 as seed ortholog is 100%.

Group of orthologs #1229. Best score 58 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.knowlesi:58

H3AS62              	100.00%		B3LCT3              	100.00%
Bootstrap support for H3AS62 as seed ortholog is 100%.
Bootstrap support for B3LCT3 as seed ortholog is 100%.

Group of orthologs #1230. Best score 58 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.knowlesi:58

H3BA70              	100.00%		B3L2U0              	100.00%
Bootstrap support for H3BA70 as seed ortholog is 100%.
Bootstrap support for B3L2U0 as seed ortholog is 100%.

Group of orthologs #1231. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.knowlesi:57

H3A980              	100.00%		B3L5R8              	100.00%
H2ZTK6              	7.25%		
H3AUL0              	5.03%		
Bootstrap support for H3A980 as seed ortholog is 100%.
Bootstrap support for B3L5R8 as seed ortholog is 100%.

Group of orthologs #1232. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.knowlesi:57

H3AJX6              	100.00%		B3L765              	100.00%
H2ZWD4              	32.36%		
Bootstrap support for H3AJX6 as seed ortholog is 100%.
Bootstrap support for B3L765 as seed ortholog is 100%.

Group of orthologs #1233. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.knowlesi:57

H3B142              	100.00%		B3L5H9              	100.00%
Bootstrap support for H3B142 as seed ortholog is 100%.
Bootstrap support for B3L5H9 as seed ortholog is 100%.

Group of orthologs #1234. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.knowlesi:57

H3B668              	100.00%		B3L638              	100.00%
Bootstrap support for H3B668 as seed ortholog is 100%.
Bootstrap support for B3L638 as seed ortholog is 100%.

Group of orthologs #1235. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.knowlesi:57

H3BEQ8              	100.00%		B3L0L7              	100.00%
Bootstrap support for H3BEQ8 as seed ortholog is 100%.
Bootstrap support for B3L0L7 as seed ortholog is 100%.

Group of orthologs #1236. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.knowlesi:57

H3BD28              	100.00%		B3L2I7              	100.00%
Bootstrap support for H3BD28 as seed ortholog is 100%.
Bootstrap support for B3L2I7 as seed ortholog is 100%.

Group of orthologs #1237. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:2 P.knowlesi:56

H3AY74              	100.00%		B3L3P5              	100.00%
H3BIK8              	8.54%		
H3B927              	8.54%		
H3BE67              	7.32%		
H3A9X4              	6.59%		
H3AQ60              	5.37%		
Bootstrap support for H3AY74 as seed ortholog is 47%.
Alternative seed ortholog is H3AGD7 (2 bits away from this cluster)
Bootstrap support for B3L3P5 as seed ortholog is 100%.

Group of orthologs #1238. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.knowlesi:56

H3B6T0              	100.00%		B3L915              	100.00%
H3AWC6              	37.69%		
H3B8K3              	34.45%		
H3A2T8              	23.71%		
H3B0E2              	6.48%		
Bootstrap support for H3B6T0 as seed ortholog is 100%.
Bootstrap support for B3L915 as seed ortholog is 100%.

Group of orthologs #1239. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.knowlesi:56

M3XJ22              	100.00%		B3L0G2              	100.00%
Bootstrap support for M3XJ22 as seed ortholog is 100%.
Bootstrap support for B3L0G2 as seed ortholog is 100%.

Group of orthologs #1240. Best score 55 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.knowlesi:55

H3AR67              	100.00%		B3L6A3              	100.00%
Bootstrap support for H3AR67 as seed ortholog is 100%.
Bootstrap support for B3L6A3 as seed ortholog is 100%.

Group of orthologs #1241. Best score 55 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.knowlesi:55

H3BF60              	100.00%		B3L3W3              	100.00%
Bootstrap support for H3BF60 as seed ortholog is 100%.
Bootstrap support for B3L3W3 as seed ortholog is 100%.

Group of orthologs #1242. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.knowlesi:54

H3B1R7              	100.00%		B3LCJ8              	100.00%
H3ARE6              	58.91%		
H3B2C5              	31.42%		
Bootstrap support for H3B1R7 as seed ortholog is 100%.
Bootstrap support for B3LCJ8 as seed ortholog is 100%.

Group of orthologs #1243. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.knowlesi:54

H3AAQ7              	100.00%		B3LC69              	100.00%
H3AJV0              	5.89%		
Bootstrap support for H3AAQ7 as seed ortholog is 100%.
Bootstrap support for B3LC69 as seed ortholog is 100%.

Group of orthologs #1244. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.knowlesi:54

H3B7D2              	100.00%		B3L481              	100.00%
Bootstrap support for H3B7D2 as seed ortholog is 100%.
Bootstrap support for B3L481 as seed ortholog is 100%.

Group of orthologs #1245. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.knowlesi:54

H3BF99              	100.00%		B3L0H6              	100.00%
Bootstrap support for H3BF99 as seed ortholog is 100%.
Bootstrap support for B3L0H6 as seed ortholog is 100%.

Group of orthologs #1246. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.knowlesi:54

M3XKY7              	100.00%		B3L8J7              	100.00%
Bootstrap support for M3XKY7 as seed ortholog is 100%.
Bootstrap support for B3L8J7 as seed ortholog is 100%.

Group of orthologs #1247. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.knowlesi:54

M3XJ30              	100.00%		B3LBP3              	100.00%
Bootstrap support for M3XJ30 as seed ortholog is 100%.
Bootstrap support for B3LBP3 as seed ortholog is 100%.

Group of orthologs #1248. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.knowlesi:53

H2ZTI6              	100.00%		B3L091              	100.00%
Bootstrap support for H2ZTI6 as seed ortholog is 100%.
Bootstrap support for B3L091 as seed ortholog is 100%.

Group of orthologs #1249. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.knowlesi:53

H2ZX00              	100.00%		B3LBK5              	100.00%
Bootstrap support for H2ZX00 as seed ortholog is 100%.
Bootstrap support for B3LBK5 as seed ortholog is 100%.

Group of orthologs #1250. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.knowlesi:53

H3B7L1              	100.00%		B3L8H2              	100.00%
Bootstrap support for H3B7L1 as seed ortholog is 100%.
Bootstrap support for B3L8H2 as seed ortholog is 100%.

Group of orthologs #1251. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.knowlesi:53

H3BHV5              	100.00%		B3L6T3              	100.00%
Bootstrap support for H3BHV5 as seed ortholog is 100%.
Bootstrap support for B3L6T3 as seed ortholog is 100%.

Group of orthologs #1252. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.knowlesi:52

H3ALX9              	100.00%		B3LD21              	100.00%
H3A507              	51.84%		
Bootstrap support for H3ALX9 as seed ortholog is 100%.
Bootstrap support for B3LD21 as seed ortholog is 100%.

Group of orthologs #1253. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.knowlesi:52

H3BB15              	100.00%		B3LCI7              	100.00%
H3B0D7              	8.05%		
Bootstrap support for H3BB15 as seed ortholog is 100%.
Bootstrap support for B3LCI7 as seed ortholog is 100%.

Group of orthologs #1254. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.knowlesi:52

H2ZRL2              	100.00%		B3L1Y8              	100.00%
Bootstrap support for H2ZRL2 as seed ortholog is 100%.
Bootstrap support for B3L1Y8 as seed ortholog is 100%.

Group of orthologs #1255. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.knowlesi:52

H3BH31              	100.00%		B3L524              	100.00%
Bootstrap support for H3BH31 as seed ortholog is 100%.
Bootstrap support for B3L524 as seed ortholog is 100%.

Group of orthologs #1256. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.knowlesi:52

H3BE98              	100.00%		B3L9J6              	100.00%
Bootstrap support for H3BE98 as seed ortholog is 100%.
Bootstrap support for B3L9J6 as seed ortholog is 100%.

Group of orthologs #1257. Best score 51 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.knowlesi:51

H3A8T8              	100.00%		B3L2L3              	100.00%
Bootstrap support for H3A8T8 as seed ortholog is 100%.
Bootstrap support for B3L2L3 as seed ortholog is 100%.

Group of orthologs #1258. Best score 51 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.knowlesi:51

H2ZZI9              	100.00%		B3LB70              	100.00%
Bootstrap support for H2ZZI9 as seed ortholog is 100%.
Bootstrap support for B3LB70 as seed ortholog is 100%.

Group of orthologs #1259. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.knowlesi:50

H3BE62              	100.00%		B3LCA9              	100.00%
H3ADC8              	51.18%		
Bootstrap support for H3BE62 as seed ortholog is 100%.
Bootstrap support for B3LCA9 as seed ortholog is 100%.

Group of orthologs #1260. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.knowlesi:50

H3A3J2              	100.00%		B3L034              	100.00%
Bootstrap support for H3A3J2 as seed ortholog is 100%.
Bootstrap support for B3L034 as seed ortholog is 100%.

Group of orthologs #1261. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.knowlesi:50

H3B3Q7              	100.00%		B3L9X4              	100.00%
Bootstrap support for H3B3Q7 as seed ortholog is 100%.
Bootstrap support for B3L9X4 as seed ortholog is 100%.

Group of orthologs #1262. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.knowlesi:49

H3ALJ6              	100.00%		B3L127              	100.00%
Bootstrap support for H3ALJ6 as seed ortholog is 100%.
Bootstrap support for B3L127 as seed ortholog is 100%.

Group of orthologs #1263. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.knowlesi:49

H3AKA6              	100.00%		B3L5P4              	100.00%
Bootstrap support for H3AKA6 as seed ortholog is 100%.
Bootstrap support for B3L5P4 as seed ortholog is 100%.

Group of orthologs #1264. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.knowlesi:49

H3ANK0              	100.00%		B3L492              	100.00%
Bootstrap support for H3ANK0 as seed ortholog is 100%.
Bootstrap support for B3L492 as seed ortholog is 100%.

Group of orthologs #1265. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.knowlesi:49

H3AS06              	100.00%		B3L548              	100.00%
Bootstrap support for H3AS06 as seed ortholog is 100%.
Bootstrap support for B3L548 as seed ortholog is 100%.

Group of orthologs #1266. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.knowlesi:49

H3AKZ4              	100.00%		B3LC45              	100.00%
Bootstrap support for H3AKZ4 as seed ortholog is 100%.
Bootstrap support for B3LC45 as seed ortholog is 100%.

Group of orthologs #1267. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.knowlesi:49

H3ASH2              	100.00%		B3LBR2              	100.00%
Bootstrap support for H3ASH2 as seed ortholog is 100%.
Bootstrap support for B3LBR2 as seed ortholog is 100%.

Group of orthologs #1268. Best score 48 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.knowlesi:48

H3B1J8              	100.00%		B3L6D6              	100.00%
H3ASR7              	32.02%		
Bootstrap support for H3B1J8 as seed ortholog is 100%.
Bootstrap support for B3L6D6 as seed ortholog is 100%.

Group of orthologs #1269. Best score 48 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.knowlesi:48

H3AIA8              	100.00%		B3L6F0              	100.00%
Bootstrap support for H3AIA8 as seed ortholog is 100%.
Bootstrap support for B3L6F0 as seed ortholog is 100%.

Group of orthologs #1270. Best score 48 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.knowlesi:48

H3BFU9              	100.00%		B3KZF6              	100.00%
Bootstrap support for H3BFU9 as seed ortholog is 100%.
Bootstrap support for B3KZF6 as seed ortholog is 100%.

Group of orthologs #1271. Best score 46 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.knowlesi:46

H3AVZ1              	100.00%		B3L4Z1              	100.00%
H3AUX6              	68.07%		
Bootstrap support for H3AVZ1 as seed ortholog is 100%.
Bootstrap support for B3L4Z1 as seed ortholog is 100%.

Group of orthologs #1272. Best score 46 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.knowlesi:46

H3AX05              	100.00%		B3L4G4              	100.00%
H3BCN9              	26.39%		
Bootstrap support for H3AX05 as seed ortholog is 100%.
Bootstrap support for B3L4G4 as seed ortholog is 100%.

Group of orthologs #1273. Best score 46 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.knowlesi:46

H3B4V7              	100.00%		B3L326              	100.00%
Bootstrap support for H3B4V7 as seed ortholog is 100%.
Bootstrap support for B3L326 as seed ortholog is 100%.

Group of orthologs #1274. Best score 46 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.knowlesi:46

H3BFT4              	100.00%		B3LAB5              	100.00%
Bootstrap support for H3BFT4 as seed ortholog is 100%.
Bootstrap support for B3LAB5 as seed ortholog is 100%.

Group of orthologs #1275. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.knowlesi:45

H3AJ29              	100.00%		B3L8S6              	100.00%
H3BC78              	73.99%		
Bootstrap support for H3AJ29 as seed ortholog is 100%.
Bootstrap support for B3L8S6 as seed ortholog is 100%.

Group of orthologs #1276. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.knowlesi:45

H3A2G5              	100.00%		B3L2H6              	100.00%
Bootstrap support for H3A2G5 as seed ortholog is 100%.
Bootstrap support for B3L2H6 as seed ortholog is 100%.

Group of orthologs #1277. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.knowlesi:45

H3AN07              	100.00%		B3L5S8              	100.00%
Bootstrap support for H3AN07 as seed ortholog is 100%.
Bootstrap support for B3L5S8 as seed ortholog is 100%.

Group of orthologs #1278. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.knowlesi:45

H3AZ54              	100.00%		B3L6F3              	100.00%
Bootstrap support for H3AZ54 as seed ortholog is 100%.
Bootstrap support for B3L6F3 as seed ortholog is 100%.

Group of orthologs #1279. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.knowlesi:44

H3AS18              	100.00%		B3L583              	100.00%
H3B2D0              	21.84%		
Bootstrap support for H3AS18 as seed ortholog is 100%.
Bootstrap support for B3L583 as seed ortholog is 100%.

Group of orthologs #1280. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.knowlesi:44

H3AXE9              	100.00%		B3LD88              	100.00%
                    	       		B3KZA1              	7.09%
Bootstrap support for H3AXE9 as seed ortholog is 100%.
Bootstrap support for B3LD88 as seed ortholog is 100%.

Group of orthologs #1281. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.knowlesi:44

H3BAR0              	100.00%		B3LBU7              	100.00%
H3B1A8              	24.20%		
Bootstrap support for H3BAR0 as seed ortholog is 100%.
Bootstrap support for B3LBU7 as seed ortholog is 100%.

Group of orthologs #1282. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.knowlesi:44

H3B1J4              	100.00%		B3L6P7              	100.00%
Bootstrap support for H3B1J4 as seed ortholog is 100%.
Bootstrap support for B3L6P7 as seed ortholog is 100%.

Group of orthologs #1283. Best score 43 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 P.knowlesi:43

H3AQT0              	100.00%		B3KZ05              	100.00%
H3AK68              	22.48%		
H3AYW9              	20.85%		
H3AQJ5              	20.20%		
M3XKW1              	18.24%		
Bootstrap support for H3AQT0 as seed ortholog is 100%.
Bootstrap support for B3KZ05 as seed ortholog is 100%.

Group of orthologs #1284. Best score 43 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 P.knowlesi:43

H3AGA9              	100.00%		B3L5P6              	100.00%
                    	       		B3L8K0              	8.57%
Bootstrap support for H3AGA9 as seed ortholog is 100%.
Bootstrap support for B3L5P6 as seed ortholog is 100%.

Group of orthologs #1285. Best score 43 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 P.knowlesi:43

H3B3A3              	100.00%		B3LB85              	100.00%
Bootstrap support for H3B3A3 as seed ortholog is 100%.
Bootstrap support for B3LB85 as seed ortholog is 100%.

Group of orthologs #1286. Best score 42 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.knowlesi:42

H3B836              	100.00%		B3LD70              	100.00%
H3BC91              	28.39%		
Bootstrap support for H3B836 as seed ortholog is 100%.
Bootstrap support for B3LD70 as seed ortholog is 100%.

Group of orthologs #1287. Best score 41 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 P.knowlesi:41

H3AFV6              	100.00%		B3KZS6              	100.00%
Bootstrap support for H3AFV6 as seed ortholog is 100%.
Bootstrap support for B3KZS6 as seed ortholog is 100%.

Group of orthologs #1288. Best score 41 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 P.knowlesi:0

H3BDX7              	100.00%		B3L269              	100.00%
Bootstrap support for H3BDX7 as seed ortholog is 100%.
Bootstrap support for B3L269 as seed ortholog is 51%.
Alternative seed ortholog is B3L0H0 (0 bits away from this cluster)

Group of orthologs #1289. Best score 40 bits
Score difference with first non-orthologous sequence - L.chalumnae:40 P.knowlesi:40

H3BIT2              	100.00%		B3L5V0              	100.00%
Bootstrap support for H3BIT2 as seed ortholog is 100%.
Bootstrap support for B3L5V0 as seed ortholog is 100%.