###################################
818 groups of orthologs
971 in-paralogs from L.braziliensis
873 in-paralogs from P.jiroveci
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 1731 bits
Score difference with first non-orthologous sequence - L.braziliensis:496 P.jiroveci:1731

A4HCF2              	100.00%		L0PGR1              	100.00%
Bootstrap support for A4HCF2 as seed ortholog is 99%.
Bootstrap support for L0PGR1 as seed ortholog is 100%.

Group of orthologs #2. Best score 1665 bits
Score difference with first non-orthologous sequence - L.braziliensis:1665 P.jiroveci:1665

A4HN66              	100.00%		L0PCQ0              	100.00%
Bootstrap support for A4HN66 as seed ortholog is 100%.
Bootstrap support for L0PCQ0 as seed ortholog is 100%.

Group of orthologs #3. Best score 1396 bits
Score difference with first non-orthologous sequence - L.braziliensis:1396 P.jiroveci:1396

E9AI80              	100.00%		L0PEL4              	100.00%
Bootstrap support for E9AI80 as seed ortholog is 100%.
Bootstrap support for L0PEL4 as seed ortholog is 100%.

Group of orthologs #4. Best score 1216 bits
Score difference with first non-orthologous sequence - L.braziliensis:1216 P.jiroveci:1216

A4HJT6              	100.00%		L0PGI2              	100.00%
Bootstrap support for A4HJT6 as seed ortholog is 100%.
Bootstrap support for L0PGI2 as seed ortholog is 100%.

Group of orthologs #5. Best score 1195 bits
Score difference with first non-orthologous sequence - L.braziliensis:693 P.jiroveci:100

A4H739              	100.00%		L0PD06              	100.00%
Bootstrap support for A4H739 as seed ortholog is 100%.
Bootstrap support for L0PD06 as seed ortholog is 87%.

Group of orthologs #6. Best score 1080 bits
Score difference with first non-orthologous sequence - L.braziliensis:1080 P.jiroveci:1080

A4H8I3              	100.00%		L0P7C3              	100.00%
Bootstrap support for A4H8I3 as seed ortholog is 100%.
Bootstrap support for L0P7C3 as seed ortholog is 100%.

Group of orthologs #7. Best score 1060 bits
Score difference with first non-orthologous sequence - L.braziliensis:1060 P.jiroveci:1060

A4HJP9              	100.00%		L0PB90              	100.00%
Bootstrap support for A4HJP9 as seed ortholog is 100%.
Bootstrap support for L0PB90 as seed ortholog is 100%.

Group of orthologs #8. Best score 1054 bits
Score difference with first non-orthologous sequence - L.braziliensis:458 P.jiroveci:1054

A4HGT2              	100.00%		L0P818              	100.00%
Bootstrap support for A4HGT2 as seed ortholog is 100%.
Bootstrap support for L0P818 as seed ortholog is 100%.

Group of orthologs #9. Best score 1054 bits
Score difference with first non-orthologous sequence - L.braziliensis:1054 P.jiroveci:1054

A4HP23              	100.00%		L0PBF5              	100.00%
Bootstrap support for A4HP23 as seed ortholog is 100%.
Bootstrap support for L0PBF5 as seed ortholog is 100%.

Group of orthologs #10. Best score 1037 bits
Score difference with first non-orthologous sequence - L.braziliensis:381 P.jiroveci:1037

A4HBG9              	100.00%		L0PG77              	100.00%
Bootstrap support for A4HBG9 as seed ortholog is 100%.
Bootstrap support for L0PG77 as seed ortholog is 100%.

Group of orthologs #11. Best score 975 bits
Score difference with first non-orthologous sequence - L.braziliensis:975 P.jiroveci:975

A4HAF0              	100.00%		L0PB43              	100.00%
Bootstrap support for A4HAF0 as seed ortholog is 100%.
Bootstrap support for L0PB43 as seed ortholog is 100%.

Group of orthologs #12. Best score 957 bits
Score difference with first non-orthologous sequence - L.braziliensis:957 P.jiroveci:957

A4HGD3              	100.00%		L0PBY6              	100.00%
Bootstrap support for A4HGD3 as seed ortholog is 100%.
Bootstrap support for L0PBY6 as seed ortholog is 100%.

Group of orthologs #13. Best score 918 bits
Score difference with first non-orthologous sequence - L.braziliensis:918 P.jiroveci:918

A4HLN0              	100.00%		L0PDK3              	100.00%
Bootstrap support for A4HLN0 as seed ortholog is 100%.
Bootstrap support for L0PDK3 as seed ortholog is 100%.

Group of orthologs #14. Best score 914 bits
Score difference with first non-orthologous sequence - L.braziliensis:138 P.jiroveci:732

A4HGY1              	100.00%		L0PEK6              	100.00%
Bootstrap support for A4HGY1 as seed ortholog is 99%.
Bootstrap support for L0PEK6 as seed ortholog is 100%.

Group of orthologs #15. Best score 903 bits
Score difference with first non-orthologous sequence - L.braziliensis:56 P.jiroveci:903

A4HQE9              	100.00%		L0PEQ1              	100.00%
Bootstrap support for A4HQE9 as seed ortholog is 69%.
Alternative seed ortholog is A4HBF9 (56 bits away from this cluster)
Bootstrap support for L0PEQ1 as seed ortholog is 100%.

Group of orthologs #16. Best score 899 bits
Score difference with first non-orthologous sequence - L.braziliensis:899 P.jiroveci:899

A4HEL1              	100.00%		L0P7P6              	100.00%
Bootstrap support for A4HEL1 as seed ortholog is 100%.
Bootstrap support for L0P7P6 as seed ortholog is 100%.

Group of orthologs #17. Best score 870 bits
Score difference with first non-orthologous sequence - L.braziliensis:389 P.jiroveci:870

A4HL70              	100.00%		L0PAW9              	100.00%
                    	       		L0PBZ0              	72.05%
Bootstrap support for A4HL70 as seed ortholog is 100%.
Bootstrap support for L0PAW9 as seed ortholog is 100%.

Group of orthologs #18. Best score 804 bits
Score difference with first non-orthologous sequence - L.braziliensis:804 P.jiroveci:243

A4HIP7              	100.00%		L0PDB3              	100.00%
Bootstrap support for A4HIP7 as seed ortholog is 100%.
Bootstrap support for L0PDB3 as seed ortholog is 99%.

Group of orthologs #19. Best score 772 bits
Score difference with first non-orthologous sequence - L.braziliensis:713 P.jiroveci:772

A4HBR7              	100.00%		L0PDF1              	100.00%
Bootstrap support for A4HBR7 as seed ortholog is 100%.
Bootstrap support for L0PDF1 as seed ortholog is 100%.

Group of orthologs #20. Best score 772 bits
Score difference with first non-orthologous sequence - L.braziliensis:772 P.jiroveci:772

A4HPG6              	100.00%		L0PEW0              	100.00%
Bootstrap support for A4HPG6 as seed ortholog is 100%.
Bootstrap support for L0PEW0 as seed ortholog is 100%.

Group of orthologs #21. Best score 763 bits
Score difference with first non-orthologous sequence - L.braziliensis:763 P.jiroveci:541

A4HQ78              	100.00%		L0PBQ6              	100.00%
Bootstrap support for A4HQ78 as seed ortholog is 100%.
Bootstrap support for L0PBQ6 as seed ortholog is 100%.

Group of orthologs #22. Best score 753 bits
Score difference with first non-orthologous sequence - L.braziliensis:753 P.jiroveci:753

A4HDM3              	100.00%		L0P9H4              	100.00%
Bootstrap support for A4HDM3 as seed ortholog is 100%.
Bootstrap support for L0P9H4 as seed ortholog is 100%.

Group of orthologs #23. Best score 750 bits
Score difference with first non-orthologous sequence - L.braziliensis:750 P.jiroveci:750

A4HBF3              	100.00%		L0PCR2              	100.00%
Bootstrap support for A4HBF3 as seed ortholog is 100%.
Bootstrap support for L0PCR2 as seed ortholog is 100%.

Group of orthologs #24. Best score 748 bits
Score difference with first non-orthologous sequence - L.braziliensis:60 P.jiroveci:556

A4HGG7              	100.00%		L0PFV0              	100.00%
Bootstrap support for A4HGG7 as seed ortholog is 92%.
Bootstrap support for L0PFV0 as seed ortholog is 100%.

Group of orthologs #25. Best score 747 bits
Score difference with first non-orthologous sequence - L.braziliensis:122 P.jiroveci:747

A4HG34              	100.00%		L0P9C7              	100.00%
Bootstrap support for A4HG34 as seed ortholog is 99%.
Bootstrap support for L0P9C7 as seed ortholog is 100%.

Group of orthologs #26. Best score 742 bits
Score difference with first non-orthologous sequence - L.braziliensis:237 P.jiroveci:602

A4HIH8              	100.00%		L0PFS2              	100.00%
A4HII0              	100.00%		
Bootstrap support for A4HIH8 as seed ortholog is 100%.
Bootstrap support for A4HII0 as seed ortholog is 100%.
Bootstrap support for L0PFS2 as seed ortholog is 100%.

Group of orthologs #27. Best score 740 bits
Score difference with first non-orthologous sequence - L.braziliensis:740 P.jiroveci:740

A4H796              	100.00%		L0P915              	100.00%
Bootstrap support for A4H796 as seed ortholog is 100%.
Bootstrap support for L0P915 as seed ortholog is 100%.

Group of orthologs #28. Best score 724 bits
Score difference with first non-orthologous sequence - L.braziliensis:724 P.jiroveci:724

A4HB86              	100.00%		L0PH89              	100.00%
Bootstrap support for A4HB86 as seed ortholog is 100%.
Bootstrap support for L0PH89 as seed ortholog is 100%.

Group of orthologs #29. Best score 708 bits
Score difference with first non-orthologous sequence - L.braziliensis:349 P.jiroveci:708

A4HLC9              	100.00%		L0PBR4              	100.00%
A4HLC8              	99.00%		
A4HC48              	94.50%		
Bootstrap support for A4HLC9 as seed ortholog is 100%.
Bootstrap support for L0PBR4 as seed ortholog is 100%.

Group of orthologs #30. Best score 708 bits
Score difference with first non-orthologous sequence - L.braziliensis:708 P.jiroveci:708

A4HCJ3              	100.00%		L0PDQ4              	100.00%
Bootstrap support for A4HCJ3 as seed ortholog is 100%.
Bootstrap support for L0PDQ4 as seed ortholog is 100%.

Group of orthologs #31. Best score 699 bits
Score difference with first non-orthologous sequence - L.braziliensis:479 P.jiroveci:409

A4H8V4              	100.00%		L0PBA5              	100.00%
Bootstrap support for A4H8V4 as seed ortholog is 100%.
Bootstrap support for L0PBA5 as seed ortholog is 100%.

Group of orthologs #32. Best score 686 bits
Score difference with first non-orthologous sequence - L.braziliensis:686 P.jiroveci:358

A4H3S2              	100.00%		L0PCW9              	100.00%
Bootstrap support for A4H3S2 as seed ortholog is 100%.
Bootstrap support for L0PCW9 as seed ortholog is 100%.

Group of orthologs #33. Best score 676 bits
Score difference with first non-orthologous sequence - L.braziliensis:52 P.jiroveci:676

A4HPL4              	100.00%		L0PGR4              	100.00%
                    	       		L0PFQ2              	93.17%
Bootstrap support for A4HPL4 as seed ortholog is 78%.
Bootstrap support for L0PGR4 as seed ortholog is 100%.

Group of orthologs #34. Best score 671 bits
Score difference with first non-orthologous sequence - L.braziliensis:152 P.jiroveci:165

A4HME2              	100.00%		L0PFC8              	100.00%
Bootstrap support for A4HME2 as seed ortholog is 99%.
Bootstrap support for L0PFC8 as seed ortholog is 99%.

Group of orthologs #35. Best score 643 bits
Score difference with first non-orthologous sequence - L.braziliensis:643 P.jiroveci:643

A4HDR8              	100.00%		L0PF66              	100.00%
Bootstrap support for A4HDR8 as seed ortholog is 100%.
Bootstrap support for L0PF66 as seed ortholog is 100%.

Group of orthologs #36. Best score 640 bits
Score difference with first non-orthologous sequence - L.braziliensis:640 P.jiroveci:640

A4HNA5              	100.00%		L0PGJ4              	100.00%
Bootstrap support for A4HNA5 as seed ortholog is 100%.
Bootstrap support for L0PGJ4 as seed ortholog is 100%.

Group of orthologs #37. Best score 629 bits
Score difference with first non-orthologous sequence - L.braziliensis:629 P.jiroveci:313

A4HMG3              	100.00%		L0P9U5              	100.00%
Bootstrap support for A4HMG3 as seed ortholog is 100%.
Bootstrap support for L0P9U5 as seed ortholog is 100%.

Group of orthologs #38. Best score 619 bits
Score difference with first non-orthologous sequence - L.braziliensis:619 P.jiroveci:619

A4H4E3              	100.00%		L0P971              	100.00%
Bootstrap support for A4H4E3 as seed ortholog is 100%.
Bootstrap support for L0P971 as seed ortholog is 100%.

Group of orthologs #39. Best score 614 bits
Score difference with first non-orthologous sequence - L.braziliensis:614 P.jiroveci:614

A4HLN1              	100.00%		L0PG21              	100.00%
Bootstrap support for A4HLN1 as seed ortholog is 100%.
Bootstrap support for L0PG21 as seed ortholog is 100%.

Group of orthologs #40. Best score 614 bits
Score difference with first non-orthologous sequence - L.braziliensis:405 P.jiroveci:614

A4HN57              	100.00%		L0PG45              	100.00%
Bootstrap support for A4HN57 as seed ortholog is 100%.
Bootstrap support for L0PG45 as seed ortholog is 100%.

Group of orthologs #41. Best score 604 bits
Score difference with first non-orthologous sequence - L.braziliensis:604 P.jiroveci:604

A4HM28              	100.00%		L0P7V0              	100.00%
Bootstrap support for A4HM28 as seed ortholog is 100%.
Bootstrap support for L0P7V0 as seed ortholog is 100%.

Group of orthologs #42. Best score 603 bits
Score difference with first non-orthologous sequence - L.braziliensis:451 P.jiroveci:437

A4H568              	100.00%		L0PC93              	100.00%
Bootstrap support for A4H568 as seed ortholog is 100%.
Bootstrap support for L0PC93 as seed ortholog is 100%.

Group of orthologs #43. Best score 599 bits
Score difference with first non-orthologous sequence - L.braziliensis:370 P.jiroveci:599

A4HK82              	100.00%		L0PGA5              	100.00%
Bootstrap support for A4HK82 as seed ortholog is 100%.
Bootstrap support for L0PGA5 as seed ortholog is 100%.

Group of orthologs #44. Best score 595 bits
Score difference with first non-orthologous sequence - L.braziliensis:410 P.jiroveci:595

A4HFQ1              	100.00%		L0PER6              	100.00%
Bootstrap support for A4HFQ1 as seed ortholog is 100%.
Bootstrap support for L0PER6 as seed ortholog is 100%.

Group of orthologs #45. Best score 588 bits
Score difference with first non-orthologous sequence - L.braziliensis:485 P.jiroveci:588

A4HLY5              	100.00%		L0PEP7              	100.00%
Bootstrap support for A4HLY5 as seed ortholog is 100%.
Bootstrap support for L0PEP7 as seed ortholog is 100%.

Group of orthologs #46. Best score 582 bits
Score difference with first non-orthologous sequence - L.braziliensis:371 P.jiroveci:582

A4HCZ3              	100.00%		L0P976              	100.00%
Bootstrap support for A4HCZ3 as seed ortholog is 100%.
Bootstrap support for L0P976 as seed ortholog is 100%.

Group of orthologs #47. Best score 581 bits
Score difference with first non-orthologous sequence - L.braziliensis:68 P.jiroveci:82

A4HPE9              	100.00%		L0PAJ7              	100.00%
Bootstrap support for A4HPE9 as seed ortholog is 91%.
Bootstrap support for L0PAJ7 as seed ortholog is 94%.

Group of orthologs #48. Best score 580 bits
Score difference with first non-orthologous sequence - L.braziliensis:342 P.jiroveci:580

A4HKX2              	100.00%		L0P945              	100.00%
Bootstrap support for A4HKX2 as seed ortholog is 100%.
Bootstrap support for L0P945 as seed ortholog is 100%.

Group of orthologs #49. Best score 577 bits
Score difference with first non-orthologous sequence - L.braziliensis:287 P.jiroveci:30

A4HNM7              	100.00%		L0P8C8              	100.00%
Bootstrap support for A4HNM7 as seed ortholog is 100%.
Bootstrap support for L0P8C8 as seed ortholog is 75%.

Group of orthologs #50. Best score 571 bits
Score difference with first non-orthologous sequence - L.braziliensis:571 P.jiroveci:571

A4HLP8              	100.00%		L0PCV7              	100.00%
Bootstrap support for A4HLP8 as seed ortholog is 100%.
Bootstrap support for L0PCV7 as seed ortholog is 100%.

Group of orthologs #51. Best score 569 bits
Score difference with first non-orthologous sequence - L.braziliensis:569 P.jiroveci:569

A4H4J2              	100.00%		L0P710              	100.00%
Bootstrap support for A4H4J2 as seed ortholog is 100%.
Bootstrap support for L0P710 as seed ortholog is 100%.

Group of orthologs #52. Best score 569 bits
Score difference with first non-orthologous sequence - L.braziliensis:392 P.jiroveci:569

A4HDT9              	100.00%		L0PD55              	100.00%
Bootstrap support for A4HDT9 as seed ortholog is 100%.
Bootstrap support for L0PD55 as seed ortholog is 100%.

Group of orthologs #53. Best score 567 bits
Score difference with first non-orthologous sequence - L.braziliensis:567 P.jiroveci:567

A4HPQ8              	100.00%		L0PDJ1              	100.00%
A4HPQ9              	100.00%		
Bootstrap support for A4HPQ8 as seed ortholog is 100%.
Bootstrap support for A4HPQ9 as seed ortholog is 100%.
Bootstrap support for L0PDJ1 as seed ortholog is 100%.

Group of orthologs #54. Best score 567 bits
Score difference with first non-orthologous sequence - L.braziliensis:567 P.jiroveci:567

A4HGC9              	100.00%		L0PA62              	100.00%
Bootstrap support for A4HGC9 as seed ortholog is 100%.
Bootstrap support for L0PA62 as seed ortholog is 100%.

Group of orthologs #55. Best score 566 bits
Score difference with first non-orthologous sequence - L.braziliensis:566 P.jiroveci:566

A4H9N1              	100.00%		L0PAG2              	100.00%
Bootstrap support for A4H9N1 as seed ortholog is 100%.
Bootstrap support for L0PAG2 as seed ortholog is 100%.

Group of orthologs #56. Best score 566 bits
Score difference with first non-orthologous sequence - L.braziliensis:566 P.jiroveci:566

A4H984              	100.00%		L0PC54              	100.00%
Bootstrap support for A4H984 as seed ortholog is 100%.
Bootstrap support for L0PC54 as seed ortholog is 100%.

Group of orthologs #57. Best score 561 bits
Score difference with first non-orthologous sequence - L.braziliensis:205 P.jiroveci:561

A4HP70              	100.00%		L0PDM6              	100.00%
A4HP69              	82.49%		
A4HKH3              	10.12%		
Bootstrap support for A4HP70 as seed ortholog is 99%.
Bootstrap support for L0PDM6 as seed ortholog is 100%.

Group of orthologs #58. Best score 560 bits
Score difference with first non-orthologous sequence - L.braziliensis:147 P.jiroveci:560

A4HCT1              	100.00%		L0PCK0              	100.00%
                    	       		L0P7U1              	99.28%
Bootstrap support for A4HCT1 as seed ortholog is 98%.
Bootstrap support for L0PCK0 as seed ortholog is 100%.

Group of orthologs #59. Best score 559 bits
Score difference with first non-orthologous sequence - L.braziliensis:559 P.jiroveci:559

A4H4Q8              	100.00%		L0PAS8              	100.00%
Bootstrap support for A4H4Q8 as seed ortholog is 100%.
Bootstrap support for L0PAS8 as seed ortholog is 100%.

Group of orthologs #60. Best score 545 bits
Score difference with first non-orthologous sequence - L.braziliensis:545 P.jiroveci:276

A4H903              	100.00%		L0PFW1              	100.00%
Bootstrap support for A4H903 as seed ortholog is 100%.
Bootstrap support for L0PFW1 as seed ortholog is 99%.

Group of orthologs #61. Best score 541 bits
Score difference with first non-orthologous sequence - L.braziliensis:148 P.jiroveci:133

A4H7E4              	100.00%		L0PG61              	100.00%
A4H7E2              	98.24%		L0PAC9              	6.46%
A4H5N8              	10.52%		
Bootstrap support for A4H7E4 as seed ortholog is 98%.
Bootstrap support for L0PG61 as seed ortholog is 97%.

Group of orthologs #62. Best score 537 bits
Score difference with first non-orthologous sequence - L.braziliensis:306 P.jiroveci:537

A4HE31              	100.00%		L0PAR0              	100.00%
Bootstrap support for A4HE31 as seed ortholog is 100%.
Bootstrap support for L0PAR0 as seed ortholog is 100%.

Group of orthologs #63. Best score 533 bits
Score difference with first non-orthologous sequence - L.braziliensis:533 P.jiroveci:533

A4H6W2              	100.00%		L0P8P8              	100.00%
Bootstrap support for A4H6W2 as seed ortholog is 100%.
Bootstrap support for L0P8P8 as seed ortholog is 100%.

Group of orthologs #64. Best score 533 bits
Score difference with first non-orthologous sequence - L.braziliensis:431 P.jiroveci:419

A4HNR7              	100.00%		L0PBP8              	100.00%
Bootstrap support for A4HNR7 as seed ortholog is 100%.
Bootstrap support for L0PBP8 as seed ortholog is 100%.

Group of orthologs #65. Best score 531 bits
Score difference with first non-orthologous sequence - L.braziliensis:531 P.jiroveci:531

A4HK92              	100.00%		L0PFU4              	100.00%
Bootstrap support for A4HK92 as seed ortholog is 100%.
Bootstrap support for L0PFU4 as seed ortholog is 100%.

Group of orthologs #66. Best score 527 bits
Score difference with first non-orthologous sequence - L.braziliensis:527 P.jiroveci:527

A4HGM6              	100.00%		L0PCC4              	100.00%
Bootstrap support for A4HGM6 as seed ortholog is 100%.
Bootstrap support for L0PCC4 as seed ortholog is 100%.

Group of orthologs #67. Best score 519 bits
Score difference with first non-orthologous sequence - L.braziliensis:362 P.jiroveci:519

A4H7F6              	100.00%		L0PGS4              	100.00%
Bootstrap support for A4H7F6 as seed ortholog is 100%.
Bootstrap support for L0PGS4 as seed ortholog is 100%.

Group of orthologs #68. Best score 518 bits
Score difference with first non-orthologous sequence - L.braziliensis:518 P.jiroveci:518

A4H5K0              	100.00%		L0PD31              	100.00%
Bootstrap support for A4H5K0 as seed ortholog is 100%.
Bootstrap support for L0PD31 as seed ortholog is 100%.

Group of orthologs #69. Best score 517 bits
Score difference with first non-orthologous sequence - L.braziliensis:517 P.jiroveci:287

A4HMM8              	100.00%		L0PAF4              	100.00%
Bootstrap support for A4HMM8 as seed ortholog is 100%.
Bootstrap support for L0PAF4 as seed ortholog is 99%.

Group of orthologs #70. Best score 515 bits
Score difference with first non-orthologous sequence - L.braziliensis:515 P.jiroveci:515

A4H874              	100.00%		L0PBJ8              	100.00%
Bootstrap support for A4H874 as seed ortholog is 100%.
Bootstrap support for L0PBJ8 as seed ortholog is 100%.

Group of orthologs #71. Best score 505 bits
Score difference with first non-orthologous sequence - L.braziliensis:505 P.jiroveci:505

A4HD35              	100.00%		L0PC79              	100.00%
Bootstrap support for A4HD35 as seed ortholog is 100%.
Bootstrap support for L0PC79 as seed ortholog is 100%.

Group of orthologs #72. Best score 502 bits
Score difference with first non-orthologous sequence - L.braziliensis:288 P.jiroveci:502

A4HG74              	100.00%		L0PC37              	100.00%
Bootstrap support for A4HG74 as seed ortholog is 100%.
Bootstrap support for L0PC37 as seed ortholog is 100%.

Group of orthologs #73. Best score 499 bits
Score difference with first non-orthologous sequence - L.braziliensis:177 P.jiroveci:218

A4HIR4              	100.00%		L0PEK2              	100.00%
Bootstrap support for A4HIR4 as seed ortholog is 99%.
Bootstrap support for L0PEK2 as seed ortholog is 100%.

Group of orthologs #74. Best score 493 bits
Score difference with first non-orthologous sequence - L.braziliensis:214 P.jiroveci:493

A4HAA5              	100.00%		L0P7N3              	100.00%
Bootstrap support for A4HAA5 as seed ortholog is 100%.
Bootstrap support for L0P7N3 as seed ortholog is 100%.

Group of orthologs #75. Best score 491 bits
Score difference with first non-orthologous sequence - L.braziliensis:491 P.jiroveci:491

A4HC40              	100.00%		L0P8W6              	100.00%
Bootstrap support for A4HC40 as seed ortholog is 100%.
Bootstrap support for L0P8W6 as seed ortholog is 100%.

Group of orthologs #76. Best score 491 bits
Score difference with first non-orthologous sequence - L.braziliensis:81 P.jiroveci:135

A4HGA9              	100.00%		L0PBH4              	100.00%
Bootstrap support for A4HGA9 as seed ortholog is 99%.
Bootstrap support for L0PBH4 as seed ortholog is 100%.

Group of orthologs #77. Best score 485 bits
Score difference with first non-orthologous sequence - L.braziliensis:306 P.jiroveci:485

A4HKX6              	100.00%		L0P7Y5              	100.00%
Bootstrap support for A4HKX6 as seed ortholog is 100%.
Bootstrap support for L0P7Y5 as seed ortholog is 100%.

Group of orthologs #78. Best score 482 bits
Score difference with first non-orthologous sequence - L.braziliensis:482 P.jiroveci:482

A4HGP1              	100.00%		L0PB98              	100.00%
Bootstrap support for A4HGP1 as seed ortholog is 100%.
Bootstrap support for L0PB98 as seed ortholog is 100%.

Group of orthologs #79. Best score 477 bits
Score difference with first non-orthologous sequence - L.braziliensis:144 P.jiroveci:198

A4H7Z6              	100.00%		L0PFG7              	100.00%
Bootstrap support for A4H7Z6 as seed ortholog is 99%.
Bootstrap support for L0PFG7 as seed ortholog is 100%.

Group of orthologs #80. Best score 476 bits
Score difference with first non-orthologous sequence - L.braziliensis:476 P.jiroveci:476

A4H9B4              	100.00%		L0PG19              	100.00%
Bootstrap support for A4H9B4 as seed ortholog is 100%.
Bootstrap support for L0PG19 as seed ortholog is 100%.

Group of orthologs #81. Best score 476 bits
Score difference with first non-orthologous sequence - L.braziliensis:255 P.jiroveci:100

A4HDD3              	100.00%		L0PE26              	100.00%
Bootstrap support for A4HDD3 as seed ortholog is 99%.
Bootstrap support for L0PE26 as seed ortholog is 94%.

Group of orthologs #82. Best score 472 bits
Score difference with first non-orthologous sequence - L.braziliensis:472 P.jiroveci:472

A4HGW1              	100.00%		L0PG53              	100.00%
Bootstrap support for A4HGW1 as seed ortholog is 100%.
Bootstrap support for L0PG53 as seed ortholog is 100%.

Group of orthologs #83. Best score 466 bits
Score difference with first non-orthologous sequence - L.braziliensis:466 P.jiroveci:466

A4HB62              	100.00%		L0P7T0              	100.00%
Bootstrap support for A4HB62 as seed ortholog is 100%.
Bootstrap support for L0P7T0 as seed ortholog is 100%.

Group of orthologs #84. Best score 466 bits
Score difference with first non-orthologous sequence - L.braziliensis:242 P.jiroveci:270

A4HBZ1              	100.00%		L0PBL6              	100.00%
Bootstrap support for A4HBZ1 as seed ortholog is 99%.
Bootstrap support for L0PBL6 as seed ortholog is 99%.

Group of orthologs #85. Best score 465 bits
Score difference with first non-orthologous sequence - L.braziliensis:465 P.jiroveci:465

A4H4N0              	100.00%		L0P7V2              	100.00%
Bootstrap support for A4H4N0 as seed ortholog is 100%.
Bootstrap support for L0P7V2 as seed ortholog is 100%.

Group of orthologs #86. Best score 462 bits
Score difference with first non-orthologous sequence - L.braziliensis:284 P.jiroveci:462

A4HDE7              	100.00%		L0PG32              	100.00%
Bootstrap support for A4HDE7 as seed ortholog is 99%.
Bootstrap support for L0PG32 as seed ortholog is 100%.

Group of orthologs #87. Best score 462 bits
Score difference with first non-orthologous sequence - L.braziliensis:462 P.jiroveci:462

A4HLY1              	100.00%		L0PBV5              	100.00%
Bootstrap support for A4HLY1 as seed ortholog is 100%.
Bootstrap support for L0PBV5 as seed ortholog is 100%.

Group of orthologs #88. Best score 461 bits
Score difference with first non-orthologous sequence - L.braziliensis:461 P.jiroveci:461

A4HPQ1              	100.00%		L0PA45              	100.00%
Bootstrap support for A4HPQ1 as seed ortholog is 100%.
Bootstrap support for L0PA45 as seed ortholog is 100%.

Group of orthologs #89. Best score 461 bits
Score difference with first non-orthologous sequence - L.braziliensis:461 P.jiroveci:461

E9AII9              	100.00%		L0P9R9              	100.00%
Bootstrap support for E9AII9 as seed ortholog is 100%.
Bootstrap support for L0P9R9 as seed ortholog is 100%.

Group of orthologs #90. Best score 460 bits
Score difference with first non-orthologous sequence - L.braziliensis:460 P.jiroveci:460

A4H9H8              	100.00%		L0PDR3              	100.00%
A4H9H9              	89.28%		
Bootstrap support for A4H9H8 as seed ortholog is 100%.
Bootstrap support for L0PDR3 as seed ortholog is 100%.

Group of orthologs #91. Best score 460 bits
Score difference with first non-orthologous sequence - L.braziliensis:88 P.jiroveci:460

A4HEF6              	100.00%		L0P9P7              	100.00%
Bootstrap support for A4HEF6 as seed ortholog is 87%.
Bootstrap support for L0P9P7 as seed ortholog is 100%.

Group of orthologs #92. Best score 458 bits
Score difference with first non-orthologous sequence - L.braziliensis:202 P.jiroveci:292

A4HP48              	100.00%		L0P8E7              	100.00%
Bootstrap support for A4HP48 as seed ortholog is 99%.
Bootstrap support for L0P8E7 as seed ortholog is 100%.

Group of orthologs #93. Best score 457 bits
Score difference with first non-orthologous sequence - L.braziliensis:457 P.jiroveci:457

A4HHM0              	100.00%		L0PF72              	100.00%
                    	       		L0P9J9              	5.08%
Bootstrap support for A4HHM0 as seed ortholog is 100%.
Bootstrap support for L0PF72 as seed ortholog is 100%.

Group of orthologs #94. Best score 457 bits
Score difference with first non-orthologous sequence - L.braziliensis:300 P.jiroveci:457

A4HKT9              	100.00%		L0PG07              	100.00%
Bootstrap support for A4HKT9 as seed ortholog is 100%.
Bootstrap support for L0PG07 as seed ortholog is 100%.

Group of orthologs #95. Best score 456 bits
Score difference with first non-orthologous sequence - L.braziliensis:291 P.jiroveci:302

A4H486              	100.00%		L0PGL8              	100.00%
Bootstrap support for A4H486 as seed ortholog is 100%.
Bootstrap support for L0PGL8 as seed ortholog is 100%.

Group of orthologs #96. Best score 453 bits
Score difference with first non-orthologous sequence - L.braziliensis:309 P.jiroveci:453

A4HFN0              	100.00%		L0P6Y2              	100.00%
Bootstrap support for A4HFN0 as seed ortholog is 100%.
Bootstrap support for L0P6Y2 as seed ortholog is 100%.

Group of orthologs #97. Best score 453 bits
Score difference with first non-orthologous sequence - L.braziliensis:453 P.jiroveci:453

A4HFV1              	100.00%		L0PFF6              	100.00%
Bootstrap support for A4HFV1 as seed ortholog is 100%.
Bootstrap support for L0PFF6 as seed ortholog is 100%.

Group of orthologs #98. Best score 450 bits
Score difference with first non-orthologous sequence - L.braziliensis:450 P.jiroveci:450

A4HH20              	100.00%		L0P773              	100.00%
Bootstrap support for A4HH20 as seed ortholog is 100%.
Bootstrap support for L0P773 as seed ortholog is 100%.

Group of orthologs #99. Best score 449 bits
Score difference with first non-orthologous sequence - L.braziliensis:449 P.jiroveci:449

A4H6U0              	100.00%		L0PC44              	100.00%
Bootstrap support for A4H6U0 as seed ortholog is 100%.
Bootstrap support for L0PC44 as seed ortholog is 100%.

Group of orthologs #100. Best score 447 bits
Score difference with first non-orthologous sequence - L.braziliensis:108 P.jiroveci:118

A4HMD1              	100.00%		L0P890              	100.00%
Bootstrap support for A4HMD1 as seed ortholog is 99%.
Bootstrap support for L0P890 as seed ortholog is 99%.

Group of orthologs #101. Best score 444 bits
Score difference with first non-orthologous sequence - L.braziliensis:50 P.jiroveci:248

A4HK20              	100.00%		L0PDY0              	100.00%
Bootstrap support for A4HK20 as seed ortholog is 84%.
Bootstrap support for L0PDY0 as seed ortholog is 100%.

Group of orthologs #102. Best score 443 bits
Score difference with first non-orthologous sequence - L.braziliensis:239 P.jiroveci:443

A4HCP0              	100.00%		L0P905              	100.00%
A4HCN5              	38.60%		
A4HCT5              	37.18%		
A4HJB0              	23.06%		
A4HJB1              	20.80%		
A4HJC5              	19.90%		
Bootstrap support for A4HCP0 as seed ortholog is 99%.
Bootstrap support for L0P905 as seed ortholog is 100%.

Group of orthologs #103. Best score 443 bits
Score difference with first non-orthologous sequence - L.braziliensis:443 P.jiroveci:443

A4HIT8              	100.00%		L0PBR9              	100.00%
Bootstrap support for A4HIT8 as seed ortholog is 100%.
Bootstrap support for L0PBR9 as seed ortholog is 100%.

Group of orthologs #104. Best score 441 bits
Score difference with first non-orthologous sequence - L.braziliensis:218 P.jiroveci:90

A4HQ35              	100.00%		L0PGL4              	100.00%
                    	       		L0P7Q7              	38.90%
Bootstrap support for A4HQ35 as seed ortholog is 99%.
Bootstrap support for L0PGL4 as seed ortholog is 97%.

Group of orthologs #105. Best score 440 bits
Score difference with first non-orthologous sequence - L.braziliensis:369 P.jiroveci:390

A4HG95              	100.00%		L0PDH7              	100.00%
Bootstrap support for A4HG95 as seed ortholog is 100%.
Bootstrap support for L0PDH7 as seed ortholog is 100%.

Group of orthologs #106. Best score 437 bits
Score difference with first non-orthologous sequence - L.braziliensis:437 P.jiroveci:437

A4HGU0              	100.00%		L0PCX1              	100.00%
A4H7V2              	22.76%		
Bootstrap support for A4HGU0 as seed ortholog is 100%.
Bootstrap support for L0PCX1 as seed ortholog is 100%.

Group of orthologs #107. Best score 437 bits
Score difference with first non-orthologous sequence - L.braziliensis:437 P.jiroveci:380

A4HIR3              	100.00%		L0PH85              	100.00%
Bootstrap support for A4HIR3 as seed ortholog is 100%.
Bootstrap support for L0PH85 as seed ortholog is 100%.

Group of orthologs #108. Best score 436 bits
Score difference with first non-orthologous sequence - L.braziliensis:436 P.jiroveci:436

E9AIB3              	100.00%		L0PC65              	100.00%
Bootstrap support for E9AIB3 as seed ortholog is 100%.
Bootstrap support for L0PC65 as seed ortholog is 100%.

Group of orthologs #109. Best score 435 bits
Score difference with first non-orthologous sequence - L.braziliensis:116 P.jiroveci:435

A4H4B8              	100.00%		L0P7P1              	100.00%
Bootstrap support for A4H4B8 as seed ortholog is 99%.
Bootstrap support for L0P7P1 as seed ortholog is 100%.

Group of orthologs #110. Best score 435 bits
Score difference with first non-orthologous sequence - L.braziliensis:435 P.jiroveci:333

A4H9Q5              	100.00%		L0PGZ9              	100.00%
Bootstrap support for A4H9Q5 as seed ortholog is 100%.
Bootstrap support for L0PGZ9 as seed ortholog is 100%.

Group of orthologs #111. Best score 435 bits
Score difference with first non-orthologous sequence - L.braziliensis:435 P.jiroveci:435

A4HIT2              	100.00%		L0PFQ5              	100.00%
Bootstrap support for A4HIT2 as seed ortholog is 100%.
Bootstrap support for L0PFQ5 as seed ortholog is 100%.

Group of orthologs #112. Best score 430 bits
Score difference with first non-orthologous sequence - L.braziliensis:244 P.jiroveci:159

A4HGK6              	100.00%		L0PC64              	100.00%
Bootstrap support for A4HGK6 as seed ortholog is 100%.
Bootstrap support for L0PC64 as seed ortholog is 100%.

Group of orthologs #113. Best score 425 bits
Score difference with first non-orthologous sequence - L.braziliensis:425 P.jiroveci:425

A4H8T3              	100.00%		L0PG27              	100.00%
Bootstrap support for A4H8T3 as seed ortholog is 100%.
Bootstrap support for L0PG27 as seed ortholog is 100%.

Group of orthologs #114. Best score 425 bits
Score difference with first non-orthologous sequence - L.braziliensis:53 P.jiroveci:302

A4HHZ7              	100.00%		L0P7R1              	100.00%
Bootstrap support for A4HHZ7 as seed ortholog is 88%.
Bootstrap support for L0P7R1 as seed ortholog is 100%.

Group of orthologs #115. Best score 424 bits
Score difference with first non-orthologous sequence - L.braziliensis:424 P.jiroveci:424

A4HGU2              	100.00%		L0P6X8              	100.00%
Bootstrap support for A4HGU2 as seed ortholog is 100%.
Bootstrap support for L0P6X8 as seed ortholog is 100%.

Group of orthologs #116. Best score 420 bits
Score difference with first non-orthologous sequence - L.braziliensis:420 P.jiroveci:420

A4H8R3              	100.00%		L0PAP2              	100.00%
Bootstrap support for A4H8R3 as seed ortholog is 100%.
Bootstrap support for L0PAP2 as seed ortholog is 100%.

Group of orthologs #117. Best score 420 bits
Score difference with first non-orthologous sequence - L.braziliensis:420 P.jiroveci:420

A4HIZ4              	100.00%		L0P921              	100.00%
Bootstrap support for A4HIZ4 as seed ortholog is 100%.
Bootstrap support for L0P921 as seed ortholog is 100%.

Group of orthologs #118. Best score 420 bits
Score difference with first non-orthologous sequence - L.braziliensis:226 P.jiroveci:143

Q25225              	100.00%		L0P7V6              	100.00%
Bootstrap support for Q25225 as seed ortholog is 100%.
Bootstrap support for L0P7V6 as seed ortholog is 99%.

Group of orthologs #119. Best score 419 bits
Score difference with first non-orthologous sequence - L.braziliensis:419 P.jiroveci:419

A4HMX5              	100.00%		L0PET9              	100.00%
Bootstrap support for A4HMX5 as seed ortholog is 100%.
Bootstrap support for L0PET9 as seed ortholog is 100%.

Group of orthologs #120. Best score 413 bits
Score difference with first non-orthologous sequence - L.braziliensis:413 P.jiroveci:119

A4H553              	100.00%		L0PCS2              	100.00%
Bootstrap support for A4H553 as seed ortholog is 100%.
Bootstrap support for L0PCS2 as seed ortholog is 99%.

Group of orthologs #121. Best score 409 bits
Score difference with first non-orthologous sequence - L.braziliensis:320 P.jiroveci:308

A4HDT7              	100.00%		L0P8C2              	100.00%
Bootstrap support for A4HDT7 as seed ortholog is 100%.
Bootstrap support for L0P8C2 as seed ortholog is 100%.

Group of orthologs #122. Best score 408 bits
Score difference with first non-orthologous sequence - L.braziliensis:408 P.jiroveci:408

A4H4V3              	100.00%		L0PA93              	100.00%
Bootstrap support for A4H4V3 as seed ortholog is 100%.
Bootstrap support for L0PA93 as seed ortholog is 100%.

Group of orthologs #123. Best score 403 bits
Score difference with first non-orthologous sequence - L.braziliensis:88 P.jiroveci:403

A4HE61              	100.00%		L0PDC9              	100.00%
Bootstrap support for A4HE61 as seed ortholog is 99%.
Bootstrap support for L0PDC9 as seed ortholog is 100%.

Group of orthologs #124. Best score 402 bits
Score difference with first non-orthologous sequence - L.braziliensis:33 P.jiroveci:27

A4HKU9              	100.00%		L0PFW2              	100.00%
Bootstrap support for A4HKU9 as seed ortholog is 74%.
Alternative seed ortholog is A4HGX0 (33 bits away from this cluster)
Bootstrap support for L0PFW2 as seed ortholog is 76%.

Group of orthologs #125. Best score 399 bits
Score difference with first non-orthologous sequence - L.braziliensis:399 P.jiroveci:399

A4HM36              	100.00%		L0PEE3              	100.00%
A4HM39              	87.45%		
A4HM41              	85.26%		
Bootstrap support for A4HM36 as seed ortholog is 100%.
Bootstrap support for L0PEE3 as seed ortholog is 100%.

Group of orthologs #126. Best score 398 bits
Score difference with first non-orthologous sequence - L.braziliensis:398 P.jiroveci:398

A4HDD0              	100.00%		L0PFN9              	100.00%
                    	       		L0PEF0              	11.13%
Bootstrap support for A4HDD0 as seed ortholog is 100%.
Bootstrap support for L0PFN9 as seed ortholog is 100%.

Group of orthologs #127. Best score 398 bits
Score difference with first non-orthologous sequence - L.braziliensis:317 P.jiroveci:398

A4HBT2              	100.00%		L0PB50              	100.00%
Bootstrap support for A4HBT2 as seed ortholog is 100%.
Bootstrap support for L0PB50 as seed ortholog is 100%.

Group of orthologs #128. Best score 396 bits
Score difference with first non-orthologous sequence - L.braziliensis:396 P.jiroveci:265

E9AIW0              	100.00%		L0PAA4              	100.00%
Bootstrap support for E9AIW0 as seed ortholog is 100%.
Bootstrap support for L0PAA4 as seed ortholog is 100%.

Group of orthologs #129. Best score 394 bits
Score difference with first non-orthologous sequence - L.braziliensis:90 P.jiroveci:394

A4HPI6              	100.00%		L0P8R6              	100.00%
Bootstrap support for A4HPI6 as seed ortholog is 95%.
Bootstrap support for L0P8R6 as seed ortholog is 100%.

Group of orthologs #130. Best score 392 bits
Score difference with first non-orthologous sequence - L.braziliensis:98 P.jiroveci:266

A4HMJ3              	100.00%		L0PE30              	100.00%
Bootstrap support for A4HMJ3 as seed ortholog is 99%.
Bootstrap support for L0PE30 as seed ortholog is 100%.

Group of orthologs #131. Best score 391 bits
Score difference with first non-orthologous sequence - L.braziliensis:391 P.jiroveci:328

A4HHL6              	100.00%		L0PG55              	100.00%
Bootstrap support for A4HHL6 as seed ortholog is 100%.
Bootstrap support for L0PG55 as seed ortholog is 100%.

Group of orthologs #132. Best score 389 bits
Score difference with first non-orthologous sequence - L.braziliensis:85 P.jiroveci:167

A4HA37              	100.00%		L0P6U6              	100.00%
Bootstrap support for A4HA37 as seed ortholog is 95%.
Bootstrap support for L0P6U6 as seed ortholog is 99%.

Group of orthologs #133. Best score 389 bits
Score difference with first non-orthologous sequence - L.braziliensis:389 P.jiroveci:389

A4HAD3              	100.00%		L0PG48              	100.00%
Bootstrap support for A4HAD3 as seed ortholog is 100%.
Bootstrap support for L0PG48 as seed ortholog is 100%.

Group of orthologs #134. Best score 388 bits
Score difference with first non-orthologous sequence - L.braziliensis:231 P.jiroveci:388

E9AIQ3              	100.00%		L0P8N1              	100.00%
Bootstrap support for E9AIQ3 as seed ortholog is 100%.
Bootstrap support for L0P8N1 as seed ortholog is 100%.

Group of orthologs #135. Best score 385 bits
Score difference with first non-orthologous sequence - L.braziliensis:385 P.jiroveci:385

A4HEF7              	100.00%		L0P7R6              	100.00%
                    	       		L0PHF8              	85.60%
Bootstrap support for A4HEF7 as seed ortholog is 100%.
Bootstrap support for L0P7R6 as seed ortholog is 100%.

Group of orthologs #136. Best score 381 bits
Score difference with first non-orthologous sequence - L.braziliensis:381 P.jiroveci:381

A4H4U8              	100.00%		L0P8G2              	100.00%
Bootstrap support for A4H4U8 as seed ortholog is 100%.
Bootstrap support for L0P8G2 as seed ortholog is 100%.

Group of orthologs #137. Best score 380 bits
Score difference with first non-orthologous sequence - L.braziliensis:380 P.jiroveci:380

A4H497              	100.00%		L0P833              	100.00%
                    	       		L0P765              	36.31%
Bootstrap support for A4H497 as seed ortholog is 100%.
Bootstrap support for L0P833 as seed ortholog is 100%.

Group of orthologs #138. Best score 379 bits
Score difference with first non-orthologous sequence - L.braziliensis:379 P.jiroveci:379

A4H9R8              	100.00%		L0PF20              	100.00%
                    	       		L0P917              	96.50%
Bootstrap support for A4H9R8 as seed ortholog is 100%.
Bootstrap support for L0PF20 as seed ortholog is 100%.

Group of orthologs #139. Best score 379 bits
Score difference with first non-orthologous sequence - L.braziliensis:255 P.jiroveci:248

A4H492              	100.00%		L0PCS3              	100.00%
Bootstrap support for A4H492 as seed ortholog is 100%.
Bootstrap support for L0PCS3 as seed ortholog is 100%.

Group of orthologs #140. Best score 379 bits
Score difference with first non-orthologous sequence - L.braziliensis:379 P.jiroveci:379

A4H9I5              	100.00%		L0P9G2              	100.00%
Bootstrap support for A4H9I5 as seed ortholog is 100%.
Bootstrap support for L0P9G2 as seed ortholog is 100%.

Group of orthologs #141. Best score 379 bits
Score difference with first non-orthologous sequence - L.braziliensis:379 P.jiroveci:379

A4HAX8              	100.00%		L0PGU0              	100.00%
Bootstrap support for A4HAX8 as seed ortholog is 100%.
Bootstrap support for L0PGU0 as seed ortholog is 100%.

Group of orthologs #142. Best score 379 bits
Score difference with first non-orthologous sequence - L.braziliensis:379 P.jiroveci:379

A4HLM8              	100.00%		L0PF49              	100.00%
Bootstrap support for A4HLM8 as seed ortholog is 100%.
Bootstrap support for L0PF49 as seed ortholog is 100%.

Group of orthologs #143. Best score 377 bits
Score difference with first non-orthologous sequence - L.braziliensis:377 P.jiroveci:377

A4H9J4              	100.00%		L0PBF3              	100.00%
Bootstrap support for A4H9J4 as seed ortholog is 100%.
Bootstrap support for L0PBF3 as seed ortholog is 100%.

Group of orthologs #144. Best score 377 bits
Score difference with first non-orthologous sequence - L.braziliensis:377 P.jiroveci:377

A4H8B1              	100.00%		L0PED9              	100.00%
Bootstrap support for A4H8B1 as seed ortholog is 100%.
Bootstrap support for L0PED9 as seed ortholog is 100%.

Group of orthologs #145. Best score 376 bits
Score difference with first non-orthologous sequence - L.braziliensis:191 P.jiroveci:376

A4HAR7              	100.00%		L0P6W8              	100.00%
                    	       		L0PH46              	100.00%
Bootstrap support for A4HAR7 as seed ortholog is 100%.
Bootstrap support for L0P6W8 as seed ortholog is 100%.
Bootstrap support for L0PH46 as seed ortholog is 100%.

Group of orthologs #146. Best score 374 bits
Score difference with first non-orthologous sequence - L.braziliensis:265 P.jiroveci:318

A4H9X7              	100.00%		L0P9F6              	100.00%
A4H9X8              	100.00%		
Bootstrap support for A4H9X7 as seed ortholog is 100%.
Bootstrap support for A4H9X8 as seed ortholog is 100%.
Bootstrap support for L0P9F6 as seed ortholog is 100%.

Group of orthologs #147. Best score 374 bits
Score difference with first non-orthologous sequence - L.braziliensis:374 P.jiroveci:374

A4HGW5              	100.00%		L0P8M6              	100.00%
Bootstrap support for A4HGW5 as seed ortholog is 100%.
Bootstrap support for L0P8M6 as seed ortholog is 100%.

Group of orthologs #148. Best score 373 bits
Score difference with first non-orthologous sequence - L.braziliensis:19 P.jiroveci:373

A4HAL3              	100.00%		L0PGU1              	100.00%
                    	       		L0PH47              	5.96%
Bootstrap support for A4HAL3 as seed ortholog is 57%.
Alternative seed ortholog is A4HL24 (19 bits away from this cluster)
Bootstrap support for L0PGU1 as seed ortholog is 100%.

Group of orthologs #149. Best score 373 bits
Score difference with first non-orthologous sequence - L.braziliensis:207 P.jiroveci:373

A4HEH1              	100.00%		L0PDT0              	100.00%
Bootstrap support for A4HEH1 as seed ortholog is 100%.
Bootstrap support for L0PDT0 as seed ortholog is 100%.

Group of orthologs #150. Best score 372 bits
Score difference with first non-orthologous sequence - L.braziliensis:39 P.jiroveci:372

A4HH67              	100.00%		L0P7X5              	100.00%
Bootstrap support for A4HH67 as seed ortholog is 71%.
Alternative seed ortholog is A4HL29 (39 bits away from this cluster)
Bootstrap support for L0P7X5 as seed ortholog is 100%.

Group of orthologs #151. Best score 372 bits
Score difference with first non-orthologous sequence - L.braziliensis:372 P.jiroveci:325

A4HK68              	100.00%		L0PER3              	100.00%
Bootstrap support for A4HK68 as seed ortholog is 100%.
Bootstrap support for L0PER3 as seed ortholog is 100%.

Group of orthologs #152. Best score 370 bits
Score difference with first non-orthologous sequence - L.braziliensis:149 P.jiroveci:75

A4H6P3              	100.00%		L0P7N1              	100.00%
Bootstrap support for A4H6P3 as seed ortholog is 99%.
Bootstrap support for L0P7N1 as seed ortholog is 96%.

Group of orthologs #153. Best score 368 bits
Score difference with first non-orthologous sequence - L.braziliensis:368 P.jiroveci:368

A4HGU6              	100.00%		L0P7M4              	100.00%
                    	       		L0PH62              	57.39%
Bootstrap support for A4HGU6 as seed ortholog is 100%.
Bootstrap support for L0P7M4 as seed ortholog is 100%.

Group of orthologs #154. Best score 367 bits
Score difference with first non-orthologous sequence - L.braziliensis:99 P.jiroveci:147

A4H602              	100.00%		L0PHY6              	100.00%
Bootstrap support for A4H602 as seed ortholog is 99%.
Bootstrap support for L0PHY6 as seed ortholog is 100%.

Group of orthologs #155. Best score 365 bits
Score difference with first non-orthologous sequence - L.braziliensis:152 P.jiroveci:107

A4HCF3              	100.00%		L0PA75              	100.00%
Bootstrap support for A4HCF3 as seed ortholog is 99%.
Bootstrap support for L0PA75 as seed ortholog is 99%.

Group of orthologs #156. Best score 364 bits
Score difference with first non-orthologous sequence - L.braziliensis:32 P.jiroveci:41

A4H5I4              	100.00%		L0PAW8              	100.00%
Bootstrap support for A4H5I4 as seed ortholog is 72%.
Alternative seed ortholog is E9AIQ7 (32 bits away from this cluster)
Bootstrap support for L0PAW8 as seed ortholog is 77%.

Group of orthologs #157. Best score 361 bits
Score difference with first non-orthologous sequence - L.braziliensis:361 P.jiroveci:361

A4HBS8              	100.00%		L0PA88              	100.00%
Bootstrap support for A4HBS8 as seed ortholog is 100%.
Bootstrap support for L0PA88 as seed ortholog is 100%.

Group of orthologs #158. Best score 361 bits
Score difference with first non-orthologous sequence - L.braziliensis:361 P.jiroveci:361

A4HB61              	100.00%		L0PB12              	100.00%
Bootstrap support for A4HB61 as seed ortholog is 100%.
Bootstrap support for L0PB12 as seed ortholog is 100%.

Group of orthologs #159. Best score 361 bits
Score difference with first non-orthologous sequence - L.braziliensis:361 P.jiroveci:361

A4HEE5              	100.00%		L0PF23              	100.00%
Bootstrap support for A4HEE5 as seed ortholog is 100%.
Bootstrap support for L0PF23 as seed ortholog is 100%.

Group of orthologs #160. Best score 361 bits
Score difference with first non-orthologous sequence - L.braziliensis:51 P.jiroveci:294

A4HNG6              	100.00%		L0P802              	100.00%
Bootstrap support for A4HNG6 as seed ortholog is 83%.
Bootstrap support for L0P802 as seed ortholog is 100%.

Group of orthologs #161. Best score 358 bits
Score difference with first non-orthologous sequence - L.braziliensis:358 P.jiroveci:358

A4H575              	100.00%		L0P7L0              	100.00%
                    	       		L0PCI7              	52.26%
Bootstrap support for A4H575 as seed ortholog is 100%.
Bootstrap support for L0P7L0 as seed ortholog is 100%.

Group of orthologs #162. Best score 356 bits
Score difference with first non-orthologous sequence - L.braziliensis:356 P.jiroveci:356

A4HEB6              	100.00%		L0PGA8              	100.00%
Bootstrap support for A4HEB6 as seed ortholog is 100%.
Bootstrap support for L0PGA8 as seed ortholog is 100%.

Group of orthologs #163. Best score 355 bits
Score difference with first non-orthologous sequence - L.braziliensis:355 P.jiroveci:355

A4HEV2              	100.00%		L0P8Z3              	100.00%
Bootstrap support for A4HEV2 as seed ortholog is 100%.
Bootstrap support for L0P8Z3 as seed ortholog is 100%.

Group of orthologs #164. Best score 354 bits
Score difference with first non-orthologous sequence - L.braziliensis:276 P.jiroveci:285

A4HI66              	100.00%		L0PBW1              	100.00%
Bootstrap support for A4HI66 as seed ortholog is 100%.
Bootstrap support for L0PBW1 as seed ortholog is 100%.

Group of orthologs #165. Best score 353 bits
Score difference with first non-orthologous sequence - L.braziliensis:353 P.jiroveci:192

A4H9U8              	100.00%		L0PAU1              	100.00%
Bootstrap support for A4H9U8 as seed ortholog is 100%.
Bootstrap support for L0PAU1 as seed ortholog is 100%.

Group of orthologs #166. Best score 353 bits
Score difference with first non-orthologous sequence - L.braziliensis:154 P.jiroveci:143

A4HF98              	100.00%		L0PF08              	100.00%
Bootstrap support for A4HF98 as seed ortholog is 99%.
Bootstrap support for L0PF08 as seed ortholog is 99%.

Group of orthologs #167. Best score 351 bits
Score difference with first non-orthologous sequence - L.braziliensis:264 P.jiroveci:351

A4H5F0              	100.00%		L0PAL8              	100.00%
Bootstrap support for A4H5F0 as seed ortholog is 100%.
Bootstrap support for L0PAL8 as seed ortholog is 100%.

Group of orthologs #168. Best score 349 bits
Score difference with first non-orthologous sequence - L.braziliensis:72 P.jiroveci:349

A4HP43              	100.00%		L0PA85              	100.00%
Bootstrap support for A4HP43 as seed ortholog is 95%.
Bootstrap support for L0PA85 as seed ortholog is 100%.

Group of orthologs #169. Best score 349 bits
Score difference with first non-orthologous sequence - L.braziliensis:349 P.jiroveci:349

A4HNF3              	100.00%		L0PFP2              	100.00%
Bootstrap support for A4HNF3 as seed ortholog is 100%.
Bootstrap support for L0PFP2 as seed ortholog is 100%.

Group of orthologs #170. Best score 348 bits
Score difference with first non-orthologous sequence - L.braziliensis:231 P.jiroveci:348

A4HG65              	100.00%		L0P9S1              	100.00%
Bootstrap support for A4HG65 as seed ortholog is 100%.
Bootstrap support for L0P9S1 as seed ortholog is 100%.

Group of orthologs #171. Best score 347 bits
Score difference with first non-orthologous sequence - L.braziliensis:347 P.jiroveci:347

A4HLS1              	100.00%		L0PGH3              	100.00%
Bootstrap support for A4HLS1 as seed ortholog is 100%.
Bootstrap support for L0PGH3 as seed ortholog is 100%.

Group of orthologs #172. Best score 344 bits
Score difference with first non-orthologous sequence - L.braziliensis:344 P.jiroveci:344

A4HBR1              	100.00%		L0PEE4              	100.00%
Bootstrap support for A4HBR1 as seed ortholog is 100%.
Bootstrap support for L0PEE4 as seed ortholog is 100%.

Group of orthologs #173. Best score 343 bits
Score difference with first non-orthologous sequence - L.braziliensis:343 P.jiroveci:343

A4HIX4              	100.00%		L0PIR9              	100.00%
Bootstrap support for A4HIX4 as seed ortholog is 100%.
Bootstrap support for L0PIR9 as seed ortholog is 100%.

Group of orthologs #174. Best score 342 bits
Score difference with first non-orthologous sequence - L.braziliensis:190 P.jiroveci:48

A4HKV4              	100.00%		L0P9A8              	100.00%
                    	       		L0PHB9              	100.00%
Bootstrap support for A4HKV4 as seed ortholog is 99%.
Bootstrap support for L0P9A8 as seed ortholog is 86%.
Bootstrap support for L0PHB9 as seed ortholog is 88%.

Group of orthologs #175. Best score 338 bits
Score difference with first non-orthologous sequence - L.braziliensis:200 P.jiroveci:264

A4HIU4              	100.00%		L0PAL3              	100.00%
Bootstrap support for A4HIU4 as seed ortholog is 100%.
Bootstrap support for L0PAL3 as seed ortholog is 100%.

Group of orthologs #176. Best score 337 bits
Score difference with first non-orthologous sequence - L.braziliensis:10 P.jiroveci:85

A4HNR5              	100.00%		L0PAY3              	100.00%
Bootstrap support for A4HNR5 as seed ortholog is 61%.
Alternative seed ortholog is A4HBW8 (10 bits away from this cluster)
Bootstrap support for L0PAY3 as seed ortholog is 99%.

Group of orthologs #177. Best score 336 bits
Score difference with first non-orthologous sequence - L.braziliensis:336 P.jiroveci:336

A4HP94              	100.00%		L0PBA8              	100.00%
A4HNJ2              	8.46%		
Bootstrap support for A4HP94 as seed ortholog is 100%.
Bootstrap support for L0PBA8 as seed ortholog is 100%.

Group of orthologs #178. Best score 333 bits
Score difference with first non-orthologous sequence - L.braziliensis:333 P.jiroveci:333

A4H932              	100.00%		L0P7Z6              	100.00%
Bootstrap support for A4H932 as seed ortholog is 100%.
Bootstrap support for L0P7Z6 as seed ortholog is 100%.

Group of orthologs #179. Best score 332 bits
Score difference with first non-orthologous sequence - L.braziliensis:332 P.jiroveci:332

A4HQD1              	100.00%		L0P7L7              	100.00%
Bootstrap support for A4HQD1 as seed ortholog is 100%.
Bootstrap support for L0P7L7 as seed ortholog is 100%.

Group of orthologs #180. Best score 329 bits
Score difference with first non-orthologous sequence - L.braziliensis:329 P.jiroveci:329

A4HDT6              	100.00%		L0PFP0              	100.00%
A4H6I1              	16.35%		
Bootstrap support for A4HDT6 as seed ortholog is 100%.
Bootstrap support for L0PFP0 as seed ortholog is 100%.

Group of orthologs #181. Best score 328 bits
Score difference with first non-orthologous sequence - L.braziliensis:149 P.jiroveci:133

A4H9C0              	100.00%		L0PEA7              	100.00%
Bootstrap support for A4H9C0 as seed ortholog is 99%.
Bootstrap support for L0PEA7 as seed ortholog is 99%.

Group of orthologs #182. Best score 326 bits
Score difference with first non-orthologous sequence - L.braziliensis:326 P.jiroveci:326

A4HJY8              	100.00%		L0PCR5              	100.00%
                    	       		L0P9C2              	59.52%
Bootstrap support for A4HJY8 as seed ortholog is 100%.
Bootstrap support for L0PCR5 as seed ortholog is 100%.

Group of orthologs #183. Best score 321 bits
Score difference with first non-orthologous sequence - L.braziliensis:192 P.jiroveci:113

A4H342              	100.00%		L0PAI4              	100.00%
                    	       		L0PEY0              	5.04%
Bootstrap support for A4H342 as seed ortholog is 99%.
Bootstrap support for L0PAI4 as seed ortholog is 99%.

Group of orthologs #184. Best score 321 bits
Score difference with first non-orthologous sequence - L.braziliensis:321 P.jiroveci:321

A4H998              	100.00%		L0PAC7              	100.00%
Bootstrap support for A4H998 as seed ortholog is 100%.
Bootstrap support for L0PAC7 as seed ortholog is 100%.

Group of orthologs #185. Best score 321 bits
Score difference with first non-orthologous sequence - L.braziliensis:321 P.jiroveci:277

A4HL27              	100.00%		L0PID0              	100.00%
Bootstrap support for A4HL27 as seed ortholog is 100%.
Bootstrap support for L0PID0 as seed ortholog is 100%.

Group of orthologs #186. Best score 318 bits
Score difference with first non-orthologous sequence - L.braziliensis:318 P.jiroveci:251

A4HFI1              	100.00%		L0PE19              	100.00%
Bootstrap support for A4HFI1 as seed ortholog is 100%.
Bootstrap support for L0PE19 as seed ortholog is 100%.

Group of orthologs #187. Best score 316 bits
Score difference with first non-orthologous sequence - L.braziliensis:316 P.jiroveci:316

A4H4P8              	100.00%		L0PA65              	100.00%
Bootstrap support for A4H4P8 as seed ortholog is 100%.
Bootstrap support for L0PA65 as seed ortholog is 100%.

Group of orthologs #188. Best score 316 bits
Score difference with first non-orthologous sequence - L.braziliensis:79 P.jiroveci:316

A4HQJ9              	100.00%		L0P9I8              	100.00%
Bootstrap support for A4HQJ9 as seed ortholog is 97%.
Bootstrap support for L0P9I8 as seed ortholog is 100%.

Group of orthologs #189. Best score 312 bits
Score difference with first non-orthologous sequence - L.braziliensis:312 P.jiroveci:312

A4HFF9              	100.00%		L0PFJ0              	100.00%
A4HMD5              	60.97%		
A4HMD7              	56.48%		
A4HMD6              	39.45%		
Bootstrap support for A4HFF9 as seed ortholog is 100%.
Bootstrap support for L0PFJ0 as seed ortholog is 100%.

Group of orthologs #190. Best score 312 bits
Score difference with first non-orthologous sequence - L.braziliensis:312 P.jiroveci:312

A4H6X6              	100.00%		L0PBA9              	100.00%
Bootstrap support for A4H6X6 as seed ortholog is 100%.
Bootstrap support for L0PBA9 as seed ortholog is 100%.

Group of orthologs #191. Best score 312 bits
Score difference with first non-orthologous sequence - L.braziliensis:312 P.jiroveci:312

A4HBS7              	100.00%		L0P9W2              	100.00%
Bootstrap support for A4HBS7 as seed ortholog is 100%.
Bootstrap support for L0P9W2 as seed ortholog is 100%.

Group of orthologs #192. Best score 312 bits
Score difference with first non-orthologous sequence - L.braziliensis:49 P.jiroveci:312

A4HHY3              	100.00%		L0PGN1              	100.00%
Bootstrap support for A4HHY3 as seed ortholog is 84%.
Bootstrap support for L0PGN1 as seed ortholog is 100%.

Group of orthologs #193. Best score 308 bits
Score difference with first non-orthologous sequence - L.braziliensis:308 P.jiroveci:308

A4H5T6              	100.00%		L0PB35              	100.00%
A4H5T7              	42.43%		
Bootstrap support for A4H5T6 as seed ortholog is 100%.
Bootstrap support for L0PB35 as seed ortholog is 100%.

Group of orthologs #194. Best score 307 bits
Score difference with first non-orthologous sequence - L.braziliensis:35 P.jiroveci:307

A4HMB3              	100.00%		L0PF21              	100.00%
                    	       		L0P6T3              	7.62%
Bootstrap support for A4HMB3 as seed ortholog is 82%.
Bootstrap support for L0PF21 as seed ortholog is 100%.

Group of orthologs #195. Best score 307 bits
Score difference with first non-orthologous sequence - L.braziliensis:307 P.jiroveci:307

A4H8X8              	100.00%		L0P9U8              	100.00%
Bootstrap support for A4H8X8 as seed ortholog is 100%.
Bootstrap support for L0P9U8 as seed ortholog is 100%.

Group of orthologs #196. Best score 307 bits
Score difference with first non-orthologous sequence - L.braziliensis:57 P.jiroveci:189

A4H9P0              	100.00%		L0PBI1              	100.00%
Bootstrap support for A4H9P0 as seed ortholog is 70%.
Alternative seed ortholog is A4HEX9 (57 bits away from this cluster)
Bootstrap support for L0PBI1 as seed ortholog is 99%.

Group of orthologs #197. Best score 305 bits
Score difference with first non-orthologous sequence - L.braziliensis:305 P.jiroveci:305

A4HDR3              	100.00%		L0PBW7              	100.00%
Bootstrap support for A4HDR3 as seed ortholog is 100%.
Bootstrap support for L0PBW7 as seed ortholog is 100%.

Group of orthologs #198. Best score 304 bits
Score difference with first non-orthologous sequence - L.braziliensis:304 P.jiroveci:304

A4H913              	100.00%		L0P942              	100.00%
                    	       		L0P7J6              	61.27%
Bootstrap support for A4H913 as seed ortholog is 100%.
Bootstrap support for L0P942 as seed ortholog is 100%.

Group of orthologs #199. Best score 304 bits
Score difference with first non-orthologous sequence - L.braziliensis:68 P.jiroveci:120

A4H481              	100.00%		L0PAY5              	100.00%
Bootstrap support for A4H481 as seed ortholog is 50%.
Alternative seed ortholog is A4HP49 (68 bits away from this cluster)
Bootstrap support for L0PAY5 as seed ortholog is 89%.

Group of orthologs #200. Best score 304 bits
Score difference with first non-orthologous sequence - L.braziliensis:304 P.jiroveci:173

A4HLA8              	100.00%		L0PEW1              	100.00%
Bootstrap support for A4HLA8 as seed ortholog is 100%.
Bootstrap support for L0PEW1 as seed ortholog is 99%.

Group of orthologs #201. Best score 300 bits
Score difference with first non-orthologous sequence - L.braziliensis:300 P.jiroveci:300

A4H9W7              	100.00%		L0PFQ8              	100.00%
Bootstrap support for A4H9W7 as seed ortholog is 100%.
Bootstrap support for L0PFQ8 as seed ortholog is 100%.

Group of orthologs #202. Best score 299 bits
Score difference with first non-orthologous sequence - L.braziliensis:299 P.jiroveci:123

A4HCM4              	100.00%		L0PD82              	100.00%
                    	       		L0P6Q8              	11.53%
Bootstrap support for A4HCM4 as seed ortholog is 100%.
Bootstrap support for L0PD82 as seed ortholog is 99%.

Group of orthologs #203. Best score 299 bits
Score difference with first non-orthologous sequence - L.braziliensis:299 P.jiroveci:299

A4H4K2              	100.00%		L0PI13              	100.00%
Bootstrap support for A4H4K2 as seed ortholog is 100%.
Bootstrap support for L0PI13 as seed ortholog is 100%.

Group of orthologs #204. Best score 297 bits
Score difference with first non-orthologous sequence - L.braziliensis:297 P.jiroveci:227

A4HBC0              	100.00%		L0PGT9              	100.00%
Bootstrap support for A4HBC0 as seed ortholog is 100%.
Bootstrap support for L0PGT9 as seed ortholog is 99%.

Group of orthologs #205. Best score 292 bits
Score difference with first non-orthologous sequence - L.braziliensis:198 P.jiroveci:292

A4HL76              	100.00%		L0PC99              	100.00%
Bootstrap support for A4HL76 as seed ortholog is 99%.
Bootstrap support for L0PC99 as seed ortholog is 100%.

Group of orthologs #206. Best score 290 bits
Score difference with first non-orthologous sequence - L.braziliensis:208 P.jiroveci:188

A4H466              	100.00%		L0PHI3              	100.00%
Bootstrap support for A4H466 as seed ortholog is 100%.
Bootstrap support for L0PHI3 as seed ortholog is 100%.

Group of orthologs #207. Best score 289 bits
Score difference with first non-orthologous sequence - L.braziliensis:13 P.jiroveci:44

A4HE09              	100.00%		L0PBP2              	100.00%
Bootstrap support for A4HE09 as seed ortholog is 60%.
Alternative seed ortholog is A4HGB7 (13 bits away from this cluster)
Bootstrap support for L0PBP2 as seed ortholog is 86%.

Group of orthologs #208. Best score 287 bits
Score difference with first non-orthologous sequence - L.braziliensis:79 P.jiroveci:201

A4H4S9              	100.00%		L0PB67              	100.00%
Bootstrap support for A4H4S9 as seed ortholog is 96%.
Bootstrap support for L0PB67 as seed ortholog is 99%.

Group of orthologs #209. Best score 287 bits
Score difference with first non-orthologous sequence - L.braziliensis:287 P.jiroveci:287

A4HIY1              	100.00%		L0PDW0              	100.00%
Bootstrap support for A4HIY1 as seed ortholog is 100%.
Bootstrap support for L0PDW0 as seed ortholog is 100%.

Group of orthologs #210. Best score 286 bits
Score difference with first non-orthologous sequence - L.braziliensis:211 P.jiroveci:197

A4HEE8              	100.00%		L0PEF5              	100.00%
Bootstrap support for A4HEE8 as seed ortholog is 100%.
Bootstrap support for L0PEF5 as seed ortholog is 100%.

Group of orthologs #211. Best score 285 bits
Score difference with first non-orthologous sequence - L.braziliensis:59 P.jiroveci:102

A4HBR4              	100.00%		L0PCK5              	100.00%
                    	       		L0PGY9              	44.14%
                    	       		L0PA98              	8.74%
Bootstrap support for A4HBR4 as seed ortholog is 94%.
Bootstrap support for L0PCK5 as seed ortholog is 99%.

Group of orthologs #212. Best score 285 bits
Score difference with first non-orthologous sequence - L.braziliensis:285 P.jiroveci:285

A4HLY3              	100.00%		L0PEX5              	100.00%
Bootstrap support for A4HLY3 as seed ortholog is 100%.
Bootstrap support for L0PEX5 as seed ortholog is 100%.

Group of orthologs #213. Best score 284 bits
Score difference with first non-orthologous sequence - L.braziliensis:284 P.jiroveci:284

A4HMK9              	100.00%		L0PA42              	100.00%
Bootstrap support for A4HMK9 as seed ortholog is 100%.
Bootstrap support for L0PA42 as seed ortholog is 100%.

Group of orthologs #214. Best score 283 bits
Score difference with first non-orthologous sequence - L.braziliensis:6 P.jiroveci:125

A4HLJ9              	100.00%		L0P9Z0              	100.00%
Bootstrap support for A4HLJ9 as seed ortholog is 55%.
Alternative seed ortholog is A4HA94 (6 bits away from this cluster)
Bootstrap support for L0P9Z0 as seed ortholog is 99%.

Group of orthologs #215. Best score 283 bits
Score difference with first non-orthologous sequence - L.braziliensis:142 P.jiroveci:283

A4HPD2              	100.00%		L0PCP3              	100.00%
Bootstrap support for A4HPD2 as seed ortholog is 99%.
Bootstrap support for L0PCP3 as seed ortholog is 100%.

Group of orthologs #216. Best score 283 bits
Score difference with first non-orthologous sequence - L.braziliensis:283 P.jiroveci:283

A4HN01              	100.00%		L0PHB7              	100.00%
Bootstrap support for A4HN01 as seed ortholog is 100%.
Bootstrap support for L0PHB7 as seed ortholog is 100%.

Group of orthologs #217. Best score 282 bits
Score difference with first non-orthologous sequence - L.braziliensis:171 P.jiroveci:282

A4HGU5              	100.00%		L0PC17              	100.00%
                    	       		L0PD22              	56.14%
Bootstrap support for A4HGU5 as seed ortholog is 99%.
Bootstrap support for L0PC17 as seed ortholog is 100%.

Group of orthologs #218. Best score 282 bits
Score difference with first non-orthologous sequence - L.braziliensis:84 P.jiroveci:55

A4HG20              	100.00%		L0PGJ9              	100.00%
E9AIQ0              	11.34%		
Bootstrap support for A4HG20 as seed ortholog is 98%.
Bootstrap support for L0PGJ9 as seed ortholog is 87%.

Group of orthologs #219. Best score 282 bits
Score difference with first non-orthologous sequence - L.braziliensis:282 P.jiroveci:282

A4HAG4              	100.00%		L0PDI6              	100.00%
Bootstrap support for A4HAG4 as seed ortholog is 100%.
Bootstrap support for L0PDI6 as seed ortholog is 100%.

Group of orthologs #220. Best score 281 bits
Score difference with first non-orthologous sequence - L.braziliensis:174 P.jiroveci:281

E9AIN9              	100.00%		L0PB24              	100.00%
Bootstrap support for E9AIN9 as seed ortholog is 99%.
Bootstrap support for L0PB24 as seed ortholog is 100%.

Group of orthologs #221. Best score 280 bits
Score difference with first non-orthologous sequence - L.braziliensis:35 P.jiroveci:123

A4H783              	100.00%		L0PA91              	100.00%
                    	       		L0PGV4              	20.54%
Bootstrap support for A4H783 as seed ortholog is 80%.
Bootstrap support for L0PA91 as seed ortholog is 89%.

Group of orthologs #222. Best score 280 bits
Score difference with first non-orthologous sequence - L.braziliensis:179 P.jiroveci:280

A4H7L4              	100.00%		L0PA41              	100.00%
Bootstrap support for A4H7L4 as seed ortholog is 99%.
Bootstrap support for L0PA41 as seed ortholog is 100%.

Group of orthologs #223. Best score 280 bits
Score difference with first non-orthologous sequence - L.braziliensis:225 P.jiroveci:280

A4HE50              	100.00%		L0P9V7              	100.00%
Bootstrap support for A4HE50 as seed ortholog is 99%.
Bootstrap support for L0P9V7 as seed ortholog is 100%.

Group of orthologs #224. Best score 279 bits
Score difference with first non-orthologous sequence - L.braziliensis:279 P.jiroveci:279

A4HFE4              	100.00%		L0PA00              	100.00%
Bootstrap support for A4HFE4 as seed ortholog is 100%.
Bootstrap support for L0PA00 as seed ortholog is 100%.

Group of orthologs #225. Best score 279 bits
Score difference with first non-orthologous sequence - L.braziliensis:279 P.jiroveci:279

A4HH10              	100.00%		L0PDK6              	100.00%
Bootstrap support for A4HH10 as seed ortholog is 100%.
Bootstrap support for L0PDK6 as seed ortholog is 100%.

Group of orthologs #226. Best score 278 bits
Score difference with first non-orthologous sequence - L.braziliensis:278 P.jiroveci:278

A4H3Y8              	100.00%		L0PAG0              	100.00%
Bootstrap support for A4H3Y8 as seed ortholog is 100%.
Bootstrap support for L0PAG0 as seed ortholog is 100%.

Group of orthologs #227. Best score 278 bits
Score difference with first non-orthologous sequence - L.braziliensis:278 P.jiroveci:123

A4HKM3              	100.00%		L0P9F3              	100.00%
Bootstrap support for A4HKM3 as seed ortholog is 100%.
Bootstrap support for L0P9F3 as seed ortholog is 99%.

Group of orthologs #228. Best score 277 bits
Score difference with first non-orthologous sequence - L.braziliensis:101 P.jiroveci:277

A4HGH1              	100.00%		L0P9R8              	100.00%
Bootstrap support for A4HGH1 as seed ortholog is 96%.
Bootstrap support for L0P9R8 as seed ortholog is 100%.

Group of orthologs #229. Best score 274 bits
Score difference with first non-orthologous sequence - L.braziliensis:29 P.jiroveci:274

A4H9Y3              	100.00%		L0PG34              	100.00%
Bootstrap support for A4H9Y3 as seed ortholog is 74%.
Alternative seed ortholog is A4HGN8 (29 bits away from this cluster)
Bootstrap support for L0PG34 as seed ortholog is 100%.

Group of orthologs #230. Best score 274 bits
Score difference with first non-orthologous sequence - L.braziliensis:274 P.jiroveci:274

A4HD58              	100.00%		L0PDY1              	100.00%
Bootstrap support for A4HD58 as seed ortholog is 100%.
Bootstrap support for L0PDY1 as seed ortholog is 100%.

Group of orthologs #231. Best score 274 bits
Score difference with first non-orthologous sequence - L.braziliensis:274 P.jiroveci:274

A4HFW3              	100.00%		L0PG82              	100.00%
Bootstrap support for A4HFW3 as seed ortholog is 100%.
Bootstrap support for L0PG82 as seed ortholog is 100%.

Group of orthologs #232. Best score 272 bits
Score difference with first non-orthologous sequence - L.braziliensis:272 P.jiroveci:272

A4HAG7              	100.00%		L0PBG8              	100.00%
Bootstrap support for A4HAG7 as seed ortholog is 100%.
Bootstrap support for L0PBG8 as seed ortholog is 100%.

Group of orthologs #233. Best score 272 bits
Score difference with first non-orthologous sequence - L.braziliensis:272 P.jiroveci:272

A4HI88              	100.00%		L0PBN2              	100.00%
Bootstrap support for A4HI88 as seed ortholog is 100%.
Bootstrap support for L0PBN2 as seed ortholog is 100%.

Group of orthologs #234. Best score 271 bits
Score difference with first non-orthologous sequence - L.braziliensis:271 P.jiroveci:271

A4HH32              	100.00%		L0PD18              	100.00%
Bootstrap support for A4HH32 as seed ortholog is 100%.
Bootstrap support for L0PD18 as seed ortholog is 100%.

Group of orthologs #235. Best score 270 bits
Score difference with first non-orthologous sequence - L.braziliensis:270 P.jiroveci:270

A4HC64              	100.00%		L0PAQ1              	100.00%
Bootstrap support for A4HC64 as seed ortholog is 100%.
Bootstrap support for L0PAQ1 as seed ortholog is 100%.

Group of orthologs #236. Best score 270 bits
Score difference with first non-orthologous sequence - L.braziliensis:17 P.jiroveci:270

A4HMZ0              	100.00%		L0PA23              	100.00%
Bootstrap support for A4HMZ0 as seed ortholog is 68%.
Alternative seed ortholog is A4H7K6 (17 bits away from this cluster)
Bootstrap support for L0PA23 as seed ortholog is 100%.

Group of orthologs #237. Best score 270 bits
Score difference with first non-orthologous sequence - L.braziliensis:270 P.jiroveci:270

A4HPX0              	100.00%		L0PBY3              	100.00%
Bootstrap support for A4HPX0 as seed ortholog is 100%.
Bootstrap support for L0PBY3 as seed ortholog is 100%.

Group of orthologs #238. Best score 269 bits
Score difference with first non-orthologous sequence - L.braziliensis:216 P.jiroveci:269

A4HHW5              	100.00%		L0P8G8              	100.00%
Bootstrap support for A4HHW5 as seed ortholog is 100%.
Bootstrap support for L0P8G8 as seed ortholog is 100%.

Group of orthologs #239. Best score 268 bits
Score difference with first non-orthologous sequence - L.braziliensis:268 P.jiroveci:268

A4HLC5              	100.00%		L0PFS8              	100.00%
Bootstrap support for A4HLC5 as seed ortholog is 100%.
Bootstrap support for L0PFS8 as seed ortholog is 100%.

Group of orthologs #240. Best score 266 bits
Score difference with first non-orthologous sequence - L.braziliensis:266 P.jiroveci:266

A4HAH5              	100.00%		L0PCN1              	100.00%
Bootstrap support for A4HAH5 as seed ortholog is 100%.
Bootstrap support for L0PCN1 as seed ortholog is 100%.

Group of orthologs #241. Best score 265 bits
Score difference with first non-orthologous sequence - L.braziliensis:265 P.jiroveci:265

A4H3S0              	100.00%		L0P9C9              	100.00%
Bootstrap support for A4H3S0 as seed ortholog is 100%.
Bootstrap support for L0P9C9 as seed ortholog is 100%.

Group of orthologs #242. Best score 265 bits
Score difference with first non-orthologous sequence - L.braziliensis:153 P.jiroveci:207

A4HPZ9              	100.00%		L0PDG5              	100.00%
Bootstrap support for A4HPZ9 as seed ortholog is 99%.
Bootstrap support for L0PDG5 as seed ortholog is 100%.

Group of orthologs #243. Best score 264 bits
Score difference with first non-orthologous sequence - L.braziliensis:264 P.jiroveci:264

A4HIS7              	100.00%		L0PD32              	100.00%
                    	       		L0PD26              	95.07%
Bootstrap support for A4HIS7 as seed ortholog is 100%.
Bootstrap support for L0PD32 as seed ortholog is 100%.

Group of orthologs #244. Best score 262 bits
Score difference with first non-orthologous sequence - L.braziliensis:173 P.jiroveci:262

A4HBC6              	100.00%		L0PDT8              	100.00%
                    	       		L0P9R2              	90.03%
Bootstrap support for A4HBC6 as seed ortholog is 100%.
Bootstrap support for L0PDT8 as seed ortholog is 100%.

Group of orthologs #245. Best score 262 bits
Score difference with first non-orthologous sequence - L.braziliensis:262 P.jiroveci:262

A4HFU6              	100.00%		L0PDT2              	100.00%
Bootstrap support for A4HFU6 as seed ortholog is 100%.
Bootstrap support for L0PDT2 as seed ortholog is 100%.

Group of orthologs #246. Best score 262 bits
Score difference with first non-orthologous sequence - L.braziliensis:99 P.jiroveci:262

A4HMZ2              	100.00%		L0P891              	100.00%
Bootstrap support for A4HMZ2 as seed ortholog is 99%.
Bootstrap support for L0P891 as seed ortholog is 100%.

Group of orthologs #247. Best score 261 bits
Score difference with first non-orthologous sequence - L.braziliensis:185 P.jiroveci:261

A4HQJ4              	100.00%		L0P7P4              	100.00%
Bootstrap support for A4HQJ4 as seed ortholog is 100%.
Bootstrap support for L0P7P4 as seed ortholog is 100%.

Group of orthologs #248. Best score 260 bits
Score difference with first non-orthologous sequence - L.braziliensis:260 P.jiroveci:260

A4HB68              	100.00%		L0PCK3              	100.00%
Bootstrap support for A4HB68 as seed ortholog is 100%.
Bootstrap support for L0PCK3 as seed ortholog is 100%.

Group of orthologs #249. Best score 259 bits
Score difference with first non-orthologous sequence - L.braziliensis:259 P.jiroveci:259

A4HEN9              	100.00%		L0P7B5              	100.00%
Bootstrap support for A4HEN9 as seed ortholog is 100%.
Bootstrap support for L0P7B5 as seed ortholog is 100%.

Group of orthologs #250. Best score 258 bits
Score difference with first non-orthologous sequence - L.braziliensis:258 P.jiroveci:258

A4HP63              	100.00%		L0P9T2              	100.00%
Bootstrap support for A4HP63 as seed ortholog is 100%.
Bootstrap support for L0P9T2 as seed ortholog is 100%.

Group of orthologs #251. Best score 257 bits
Score difference with first non-orthologous sequence - L.braziliensis:257 P.jiroveci:257

A4HJE1              	100.00%		L0PG22              	100.00%
                    	       		L0PB04              	74.01%
Bootstrap support for A4HJE1 as seed ortholog is 100%.
Bootstrap support for L0PG22 as seed ortholog is 100%.

Group of orthologs #252. Best score 257 bits
Score difference with first non-orthologous sequence - L.braziliensis:257 P.jiroveci:257

A4HN55              	100.00%		L0PET2              	100.00%
                    	       		L0PAE5              	84.45%
Bootstrap support for A4HN55 as seed ortholog is 100%.
Bootstrap support for L0PET2 as seed ortholog is 100%.

Group of orthologs #253. Best score 256 bits
Score difference with first non-orthologous sequence - L.braziliensis:256 P.jiroveci:256

A4H8F0              	100.00%		L0PFF9              	100.00%
A4HD08              	10.42%		
Bootstrap support for A4H8F0 as seed ortholog is 100%.
Bootstrap support for L0PFF9 as seed ortholog is 100%.

Group of orthologs #254. Best score 255 bits
Score difference with first non-orthologous sequence - L.braziliensis:255 P.jiroveci:255

A4HBM3              	100.00%		L0PCH0              	100.00%
Bootstrap support for A4HBM3 as seed ortholog is 100%.
Bootstrap support for L0PCH0 as seed ortholog is 100%.

Group of orthologs #255. Best score 254 bits
Score difference with first non-orthologous sequence - L.braziliensis:254 P.jiroveci:254

A4H8J8              	100.00%		L0PEZ2              	100.00%
                    	       		L0PH30              	87.92%
Bootstrap support for A4H8J8 as seed ortholog is 100%.
Bootstrap support for L0PEZ2 as seed ortholog is 100%.

Group of orthologs #256. Best score 253 bits
Score difference with first non-orthologous sequence - L.braziliensis:253 P.jiroveci:253

A4HF17              	100.00%		L0PB54              	100.00%
Bootstrap support for A4HF17 as seed ortholog is 100%.
Bootstrap support for L0PB54 as seed ortholog is 100%.

Group of orthologs #257. Best score 253 bits
Score difference with first non-orthologous sequence - L.braziliensis:253 P.jiroveci:253

A4HP29              	100.00%		L0PCJ2              	100.00%
Bootstrap support for A4HP29 as seed ortholog is 100%.
Bootstrap support for L0PCJ2 as seed ortholog is 100%.

Group of orthologs #258. Best score 252 bits
Score difference with first non-orthologous sequence - L.braziliensis:252 P.jiroveci:201

A4H3F8              	100.00%		L0PFT9              	100.00%
Bootstrap support for A4H3F8 as seed ortholog is 100%.
Bootstrap support for L0PFT9 as seed ortholog is 100%.

Group of orthologs #259. Best score 252 bits
Score difference with first non-orthologous sequence - L.braziliensis:96 P.jiroveci:252

A4H6P9              	100.00%		L0PFQ3              	100.00%
Bootstrap support for A4H6P9 as seed ortholog is 98%.
Bootstrap support for L0PFQ3 as seed ortholog is 100%.

Group of orthologs #260. Best score 252 bits
Score difference with first non-orthologous sequence - L.braziliensis:252 P.jiroveci:252

A4HPA5              	100.00%		L0P7E2              	100.00%
Bootstrap support for A4HPA5 as seed ortholog is 100%.
Bootstrap support for L0P7E2 as seed ortholog is 100%.

Group of orthologs #261. Best score 251 bits
Score difference with first non-orthologous sequence - L.braziliensis:251 P.jiroveci:251

A4H3D3              	100.00%		L0PAN7              	100.00%
Bootstrap support for A4H3D3 as seed ortholog is 100%.
Bootstrap support for L0PAN7 as seed ortholog is 100%.

Group of orthologs #262. Best score 250 bits
Score difference with first non-orthologous sequence - L.braziliensis:250 P.jiroveci:250

A4HH30              	100.00%		L0PAS3              	100.00%
Bootstrap support for A4HH30 as seed ortholog is 100%.
Bootstrap support for L0PAS3 as seed ortholog is 100%.

Group of orthologs #263. Best score 248 bits
Score difference with first non-orthologous sequence - L.braziliensis:248 P.jiroveci:248

A4HAZ1              	100.00%		L0PAJ2              	100.00%
Bootstrap support for A4HAZ1 as seed ortholog is 100%.
Bootstrap support for L0PAJ2 as seed ortholog is 100%.

Group of orthologs #264. Best score 247 bits
Score difference with first non-orthologous sequence - L.braziliensis:11 P.jiroveci:63

A4H7Y3              	100.00%		L0PEM1              	100.00%
Bootstrap support for A4H7Y3 as seed ortholog is 37%.
Alternative seed ortholog is A4HP49 (11 bits away from this cluster)
Bootstrap support for L0PEM1 as seed ortholog is 91%.

Group of orthologs #265. Best score 247 bits
Score difference with first non-orthologous sequence - L.braziliensis:247 P.jiroveci:247

A4HGQ1              	100.00%		L0P6U2              	100.00%
Bootstrap support for A4HGQ1 as seed ortholog is 100%.
Bootstrap support for L0P6U2 as seed ortholog is 100%.

Group of orthologs #266. Best score 247 bits
Score difference with first non-orthologous sequence - L.braziliensis:247 P.jiroveci:247

A4HBG1              	100.00%		L0PGF5              	100.00%
Bootstrap support for A4HBG1 as seed ortholog is 100%.
Bootstrap support for L0PGF5 as seed ortholog is 100%.

Group of orthologs #267. Best score 247 bits
Score difference with first non-orthologous sequence - L.braziliensis:247 P.jiroveci:247

A4HCP4              	100.00%		L0PG05              	100.00%
Bootstrap support for A4HCP4 as seed ortholog is 100%.
Bootstrap support for L0PG05 as seed ortholog is 100%.

Group of orthologs #268. Best score 247 bits
Score difference with first non-orthologous sequence - L.braziliensis:112 P.jiroveci:247

E9AIC2              	100.00%		L0PB97              	100.00%
Bootstrap support for E9AIC2 as seed ortholog is 99%.
Bootstrap support for L0PB97 as seed ortholog is 100%.

Group of orthologs #269. Best score 245 bits
Score difference with first non-orthologous sequence - L.braziliensis:137 P.jiroveci:245

A4H3J5              	100.00%		L0PGR0              	100.00%
A4H374              	34.24%		
A4H373              	32.12%		
A4H375              	27.54%		
Bootstrap support for A4H3J5 as seed ortholog is 99%.
Bootstrap support for L0PGR0 as seed ortholog is 100%.

Group of orthologs #270. Best score 245 bits
Score difference with first non-orthologous sequence - L.braziliensis:89 P.jiroveci:109

A4HN73              	100.00%		L0P966              	100.00%
Bootstrap support for A4HN73 as seed ortholog is 95%.
Bootstrap support for L0P966 as seed ortholog is 99%.

Group of orthologs #271. Best score 245 bits
Score difference with first non-orthologous sequence - L.braziliensis:245 P.jiroveci:245

A4HMI7              	100.00%		L0PGJ5              	100.00%
Bootstrap support for A4HMI7 as seed ortholog is 100%.
Bootstrap support for L0PGJ5 as seed ortholog is 100%.

Group of orthologs #272. Best score 244 bits
Score difference with first non-orthologous sequence - L.braziliensis:244 P.jiroveci:244

A4H4Z3              	100.00%		L0PCH8              	100.00%
Bootstrap support for A4H4Z3 as seed ortholog is 100%.
Bootstrap support for L0PCH8 as seed ortholog is 100%.

Group of orthologs #273. Best score 244 bits
Score difference with first non-orthologous sequence - L.braziliensis:186 P.jiroveci:244

A4H4E9              	100.00%		L0PDF2              	100.00%
Bootstrap support for A4H4E9 as seed ortholog is 100%.
Bootstrap support for L0PDF2 as seed ortholog is 100%.

Group of orthologs #274. Best score 243 bits
Score difference with first non-orthologous sequence - L.braziliensis:243 P.jiroveci:243

A4HFY0              	100.00%		L0PE74              	100.00%
Bootstrap support for A4HFY0 as seed ortholog is 100%.
Bootstrap support for L0PE74 as seed ortholog is 100%.

Group of orthologs #275. Best score 243 bits
Score difference with first non-orthologous sequence - L.braziliensis:128 P.jiroveci:243

A4HF81              	100.00%		L0PI36              	100.00%
Bootstrap support for A4HF81 as seed ortholog is 98%.
Bootstrap support for L0PI36 as seed ortholog is 100%.

Group of orthologs #276. Best score 243 bits
Score difference with first non-orthologous sequence - L.braziliensis:243 P.jiroveci:243

A4HPP8              	100.00%		L0PF83              	100.00%
Bootstrap support for A4HPP8 as seed ortholog is 100%.
Bootstrap support for L0PF83 as seed ortholog is 100%.

Group of orthologs #277. Best score 242 bits
Score difference with first non-orthologous sequence - L.braziliensis:242 P.jiroveci:242

A4H6M2              	100.00%		L0PFI8              	100.00%
A4H6M3              	20.00%		
Bootstrap support for A4H6M2 as seed ortholog is 100%.
Bootstrap support for L0PFI8 as seed ortholog is 100%.

Group of orthologs #278. Best score 242 bits
Score difference with first non-orthologous sequence - L.braziliensis:242 P.jiroveci:242

A4H4T9              	100.00%		L0PD99              	100.00%
Bootstrap support for A4H4T9 as seed ortholog is 100%.
Bootstrap support for L0PD99 as seed ortholog is 100%.

Group of orthologs #279. Best score 242 bits
Score difference with first non-orthologous sequence - L.braziliensis:242 P.jiroveci:242

A4HEC2              	100.00%		L0PBM9              	100.00%
Bootstrap support for A4HEC2 as seed ortholog is 100%.
Bootstrap support for L0PBM9 as seed ortholog is 100%.

Group of orthologs #280. Best score 242 bits
Score difference with first non-orthologous sequence - L.braziliensis:195 P.jiroveci:242

A4HI82              	100.00%		L0P8L5              	100.00%
Bootstrap support for A4HI82 as seed ortholog is 100%.
Bootstrap support for L0P8L5 as seed ortholog is 100%.

Group of orthologs #281. Best score 242 bits
Score difference with first non-orthologous sequence - L.braziliensis:242 P.jiroveci:242

A4HBP5              	100.00%		L0PFC2              	100.00%
Bootstrap support for A4HBP5 as seed ortholog is 100%.
Bootstrap support for L0PFC2 as seed ortholog is 100%.

Group of orthologs #282. Best score 240 bits
Score difference with first non-orthologous sequence - L.braziliensis:240 P.jiroveci:240

A4HNU9              	100.00%		L0PEV9              	100.00%
Bootstrap support for A4HNU9 as seed ortholog is 100%.
Bootstrap support for L0PEV9 as seed ortholog is 100%.

Group of orthologs #283. Best score 239 bits
Score difference with first non-orthologous sequence - L.braziliensis:239 P.jiroveci:239

A4HGN5              	100.00%		L0P8A6              	100.00%
Bootstrap support for A4HGN5 as seed ortholog is 100%.
Bootstrap support for L0P8A6 as seed ortholog is 100%.

Group of orthologs #284. Best score 238 bits
Score difference with first non-orthologous sequence - L.braziliensis:238 P.jiroveci:238

E9AI58              	100.00%		L0P9C8              	100.00%
Bootstrap support for E9AI58 as seed ortholog is 100%.
Bootstrap support for L0P9C8 as seed ortholog is 100%.

Group of orthologs #285. Best score 237 bits
Score difference with first non-orthologous sequence - L.braziliensis:40 P.jiroveci:30

A4H925              	100.00%		L0P8E8              	100.00%
A4HE99              	100.00%		L0PEB0              	100.00%
A4HK48              	11.61%		
Bootstrap support for A4H925 as seed ortholog is 84%.
Bootstrap support for A4HE99 as seed ortholog is 78%.
Bootstrap support for L0P8E8 as seed ortholog is 77%.
Bootstrap support for L0PEB0 as seed ortholog is 74%.
Alternative seed ortholog is L0P7A7 (30 bits away from this cluster)

Group of orthologs #286. Best score 237 bits
Score difference with first non-orthologous sequence - L.braziliensis:237 P.jiroveci:237

A4H993              	100.00%		L0PCY9              	100.00%
Bootstrap support for A4H993 as seed ortholog is 100%.
Bootstrap support for L0PCY9 as seed ortholog is 100%.

Group of orthologs #287. Best score 236 bits
Score difference with first non-orthologous sequence - L.braziliensis:236 P.jiroveci:236

A4H5R5              	100.00%		L0PFZ0              	100.00%
Bootstrap support for A4H5R5 as seed ortholog is 100%.
Bootstrap support for L0PFZ0 as seed ortholog is 100%.

Group of orthologs #288. Best score 236 bits
Score difference with first non-orthologous sequence - L.braziliensis:236 P.jiroveci:236

A4HM46              	100.00%		L0P861              	100.00%
Bootstrap support for A4HM46 as seed ortholog is 100%.
Bootstrap support for L0P861 as seed ortholog is 100%.

Group of orthologs #289. Best score 236 bits
Score difference with first non-orthologous sequence - L.braziliensis:236 P.jiroveci:236

A4HIN5              	100.00%		L0PCB2              	100.00%
Bootstrap support for A4HIN5 as seed ortholog is 100%.
Bootstrap support for L0PCB2 as seed ortholog is 100%.

Group of orthologs #290. Best score 236 bits
Score difference with first non-orthologous sequence - L.braziliensis:236 P.jiroveci:236

A4HHZ9              	100.00%		L0PEB2              	100.00%
Bootstrap support for A4HHZ9 as seed ortholog is 100%.
Bootstrap support for L0PEB2 as seed ortholog is 100%.

Group of orthologs #291. Best score 236 bits
Score difference with first non-orthologous sequence - L.braziliensis:236 P.jiroveci:236

A4HMQ7              	100.00%		L0PBD7              	100.00%
Bootstrap support for A4HMQ7 as seed ortholog is 100%.
Bootstrap support for L0PBD7 as seed ortholog is 100%.

Group of orthologs #292. Best score 235 bits
Score difference with first non-orthologous sequence - L.braziliensis:69 P.jiroveci:235

A4HHR4              	100.00%		L0PE41              	100.00%
Bootstrap support for A4HHR4 as seed ortholog is 89%.
Bootstrap support for L0PE41 as seed ortholog is 100%.

Group of orthologs #293. Best score 234 bits
Score difference with first non-orthologous sequence - L.braziliensis:234 P.jiroveci:234

A4HBP0              	100.00%		L0P8T4              	100.00%
Bootstrap support for A4HBP0 as seed ortholog is 100%.
Bootstrap support for L0P8T4 as seed ortholog is 100%.

Group of orthologs #294. Best score 234 bits
Score difference with first non-orthologous sequence - L.braziliensis:234 P.jiroveci:234

A4HPU0              	100.00%		L0PCA7              	100.00%
Bootstrap support for A4HPU0 as seed ortholog is 100%.
Bootstrap support for L0PCA7 as seed ortholog is 100%.

Group of orthologs #295. Best score 233 bits
Score difference with first non-orthologous sequence - L.braziliensis:233 P.jiroveci:22

A4HC04              	100.00%		L0PB21              	100.00%
Bootstrap support for A4HC04 as seed ortholog is 100%.
Bootstrap support for L0PB21 as seed ortholog is 76%.

Group of orthologs #296. Best score 232 bits
Score difference with first non-orthologous sequence - L.braziliensis:232 P.jiroveci:232

A4HAX9              	100.00%		L0PF30              	100.00%
Bootstrap support for A4HAX9 as seed ortholog is 100%.
Bootstrap support for L0PF30 as seed ortholog is 100%.

Group of orthologs #297. Best score 230 bits
Score difference with first non-orthologous sequence - L.braziliensis:185 P.jiroveci:230

A4H8T9              	100.00%		L0PD03              	100.00%
Bootstrap support for A4H8T9 as seed ortholog is 100%.
Bootstrap support for L0PD03 as seed ortholog is 100%.

Group of orthologs #298. Best score 229 bits
Score difference with first non-orthologous sequence - L.braziliensis:58 P.jiroveci:116

A4HLQ5              	100.00%		L0P6V9              	100.00%
A4H5F1              	26.14%		L0PBF0              	10.13%
A4HQ54              	24.27%		
Bootstrap support for A4HLQ5 as seed ortholog is 97%.
Bootstrap support for L0P6V9 as seed ortholog is 99%.

Group of orthologs #299. Best score 229 bits
Score difference with first non-orthologous sequence - L.braziliensis:229 P.jiroveci:229

A4H9T4              	100.00%		L0PB03              	100.00%
Bootstrap support for A4H9T4 as seed ortholog is 100%.
Bootstrap support for L0PB03 as seed ortholog is 100%.

Group of orthologs #300. Best score 228 bits
Score difference with first non-orthologous sequence - L.braziliensis:228 P.jiroveci:228

A4H7B1              	100.00%		L0PBQ9              	100.00%
Bootstrap support for A4H7B1 as seed ortholog is 100%.
Bootstrap support for L0PBQ9 as seed ortholog is 100%.

Group of orthologs #301. Best score 228 bits
Score difference with first non-orthologous sequence - L.braziliensis:167 P.jiroveci:228

A4HAD2              	100.00%		L0PDH8              	100.00%
Bootstrap support for A4HAD2 as seed ortholog is 100%.
Bootstrap support for L0PDH8 as seed ortholog is 100%.

Group of orthologs #302. Best score 227 bits
Score difference with first non-orthologous sequence - L.braziliensis:74 P.jiroveci:4

A4HJR7              	100.00%		L0P9E4              	100.00%
A4HJL1              	45.26%		
Bootstrap support for A4HJR7 as seed ortholog is 99%.
Bootstrap support for L0P9E4 as seed ortholog is 57%.
Alternative seed ortholog is L0PC59 (4 bits away from this cluster)

Group of orthologs #303. Best score 227 bits
Score difference with first non-orthologous sequence - L.braziliensis:227 P.jiroveci:227

A4H3W7              	100.00%		L0PAM2              	100.00%
Bootstrap support for A4H3W7 as seed ortholog is 100%.
Bootstrap support for L0PAM2 as seed ortholog is 100%.

Group of orthologs #304. Best score 226 bits
Score difference with first non-orthologous sequence - L.braziliensis:150 P.jiroveci:226

A4HP92              	100.00%		L0PDV0              	100.00%
Bootstrap support for A4HP92 as seed ortholog is 99%.
Bootstrap support for L0PDV0 as seed ortholog is 100%.

Group of orthologs #305. Best score 225 bits
Score difference with first non-orthologous sequence - L.braziliensis:225 P.jiroveci:225

A4HEA7              	100.00%		L0PB85              	100.00%
                    	       		L0PD69              	7.02%
Bootstrap support for A4HEA7 as seed ortholog is 100%.
Bootstrap support for L0PB85 as seed ortholog is 100%.

Group of orthologs #306. Best score 225 bits
Score difference with first non-orthologous sequence - L.braziliensis:225 P.jiroveci:225

A4H7A6              	100.00%		L0PCG4              	100.00%
Bootstrap support for A4H7A6 as seed ortholog is 100%.
Bootstrap support for L0PCG4 as seed ortholog is 100%.

Group of orthologs #307. Best score 225 bits
Score difference with first non-orthologous sequence - L.braziliensis:225 P.jiroveci:225

A4HA56              	100.00%		L0P9X7              	100.00%
Bootstrap support for A4HA56 as seed ortholog is 100%.
Bootstrap support for L0P9X7 as seed ortholog is 100%.

Group of orthologs #308. Best score 224 bits
Score difference with first non-orthologous sequence - L.braziliensis:143 P.jiroveci:224

A4HG11              	100.00%		L0P9P0              	100.00%
Bootstrap support for A4HG11 as seed ortholog is 100%.
Bootstrap support for L0P9P0 as seed ortholog is 100%.

Group of orthologs #309. Best score 223 bits
Score difference with first non-orthologous sequence - L.braziliensis:223 P.jiroveci:223

A4HJP8              	100.00%		L0P702              	100.00%
Bootstrap support for A4HJP8 as seed ortholog is 100%.
Bootstrap support for L0P702 as seed ortholog is 100%.

Group of orthologs #310. Best score 223 bits
Score difference with first non-orthologous sequence - L.braziliensis:136 P.jiroveci:110

A4HMF2              	100.00%		L0P876              	100.00%
Bootstrap support for A4HMF2 as seed ortholog is 100%.
Bootstrap support for L0P876 as seed ortholog is 99%.

Group of orthologs #311. Best score 223 bits
Score difference with first non-orthologous sequence - L.braziliensis:25 P.jiroveci:99

A4HG10              	100.00%		L0PGH8              	100.00%
Bootstrap support for A4HG10 as seed ortholog is 73%.
Alternative seed ortholog is A4HNR1 (25 bits away from this cluster)
Bootstrap support for L0PGH8 as seed ortholog is 99%.

Group of orthologs #312. Best score 221 bits
Score difference with first non-orthologous sequence - L.braziliensis:43 P.jiroveci:221

E9AI79              	100.00%		L0P9J7              	100.00%
Bootstrap support for E9AI79 as seed ortholog is 89%.
Bootstrap support for L0P9J7 as seed ortholog is 100%.

Group of orthologs #313. Best score 220 bits
Score difference with first non-orthologous sequence - L.braziliensis:220 P.jiroveci:220

A4H7T8              	100.00%		L0PE98              	100.00%
Bootstrap support for A4H7T8 as seed ortholog is 100%.
Bootstrap support for L0PE98 as seed ortholog is 100%.

Group of orthologs #314. Best score 220 bits
Score difference with first non-orthologous sequence - L.braziliensis:220 P.jiroveci:179

A4HIX8              	100.00%		L0PEM3              	100.00%
Bootstrap support for A4HIX8 as seed ortholog is 100%.
Bootstrap support for L0PEM3 as seed ortholog is 99%.

Group of orthologs #315. Best score 217 bits
Score difference with first non-orthologous sequence - L.braziliensis:101 P.jiroveci:217

A4HAB8              	100.00%		L0PE61              	100.00%
A4HAC0              	57.96%		
A4HAB9              	27.32%		
A4HA28              	8.79%		
Bootstrap support for A4HAB8 as seed ortholog is 99%.
Bootstrap support for L0PE61 as seed ortholog is 100%.

Group of orthologs #316. Best score 217 bits
Score difference with first non-orthologous sequence - L.braziliensis:64 P.jiroveci:217

A4HEP9              	100.00%		L0PG10              	100.00%
Bootstrap support for A4HEP9 as seed ortholog is 93%.
Bootstrap support for L0PG10 as seed ortholog is 100%.

Group of orthologs #317. Best score 217 bits
Score difference with first non-orthologous sequence - L.braziliensis:217 P.jiroveci:217

A4HQ32              	100.00%		L0PBJ1              	100.00%
Bootstrap support for A4HQ32 as seed ortholog is 100%.
Bootstrap support for L0PBJ1 as seed ortholog is 100%.

Group of orthologs #318. Best score 216 bits
Score difference with first non-orthologous sequence - L.braziliensis:140 P.jiroveci:216

A4HEM2              	100.00%		L0PCG0              	100.00%
A4HEM3              	100.00%		
Bootstrap support for A4HEM2 as seed ortholog is 100%.
Bootstrap support for A4HEM3 as seed ortholog is 100%.
Bootstrap support for L0PCG0 as seed ortholog is 100%.

Group of orthologs #319. Best score 216 bits
Score difference with first non-orthologous sequence - L.braziliensis:147 P.jiroveci:111

A4H3D4              	100.00%		L0PDB7              	100.00%
Bootstrap support for A4H3D4 as seed ortholog is 99%.
Bootstrap support for L0PDB7 as seed ortholog is 99%.

Group of orthologs #320. Best score 215 bits
Score difference with first non-orthologous sequence - L.braziliensis:215 P.jiroveci:215

A4HB93              	100.00%		L0PEC0              	100.00%
Bootstrap support for A4HB93 as seed ortholog is 100%.
Bootstrap support for L0PEC0 as seed ortholog is 100%.

Group of orthologs #321. Best score 215 bits
Score difference with first non-orthologous sequence - L.braziliensis:89 P.jiroveci:80

A4HPV7              	100.00%		L0PBM6              	100.00%
Bootstrap support for A4HPV7 as seed ortholog is 92%.
Bootstrap support for L0PBM6 as seed ortholog is 85%.

Group of orthologs #322. Best score 215 bits
Score difference with first non-orthologous sequence - L.braziliensis:215 P.jiroveci:215

A4HP20              	100.00%		L0PE17              	100.00%
Bootstrap support for A4HP20 as seed ortholog is 100%.
Bootstrap support for L0PE17 as seed ortholog is 100%.

Group of orthologs #323. Best score 213 bits
Score difference with first non-orthologous sequence - L.braziliensis:213 P.jiroveci:213

A4HFC3              	100.00%		L0PCY0              	100.00%
Bootstrap support for A4HFC3 as seed ortholog is 100%.
Bootstrap support for L0PCY0 as seed ortholog is 100%.

Group of orthologs #324. Best score 212 bits
Score difference with first non-orthologous sequence - L.braziliensis:212 P.jiroveci:212

A4HEY0              	100.00%		L0PBT8              	100.00%
Bootstrap support for A4HEY0 as seed ortholog is 100%.
Bootstrap support for L0PBT8 as seed ortholog is 100%.

Group of orthologs #325. Best score 211 bits
Score difference with first non-orthologous sequence - L.braziliensis:211 P.jiroveci:211

A4H3Z2              	100.00%		L0P9I4              	100.00%
Bootstrap support for A4H3Z2 as seed ortholog is 100%.
Bootstrap support for L0P9I4 as seed ortholog is 100%.

Group of orthologs #326. Best score 211 bits
Score difference with first non-orthologous sequence - L.braziliensis:211 P.jiroveci:65

A4H4Q9              	100.00%		L0PDD3              	100.00%
Bootstrap support for A4H4Q9 as seed ortholog is 100%.
Bootstrap support for L0PDD3 as seed ortholog is 99%.

Group of orthologs #327. Best score 211 bits
Score difference with first non-orthologous sequence - L.braziliensis:211 P.jiroveci:211

A4HHW9              	100.00%		L0PDD5              	100.00%
Bootstrap support for A4HHW9 as seed ortholog is 100%.
Bootstrap support for L0PDD5 as seed ortholog is 100%.

Group of orthologs #328. Best score 211 bits
Score difference with first non-orthologous sequence - L.braziliensis:150 P.jiroveci:211

A4HI87              	100.00%		L0PD17              	100.00%
Bootstrap support for A4HI87 as seed ortholog is 99%.
Bootstrap support for L0PD17 as seed ortholog is 100%.

Group of orthologs #329. Best score 210 bits
Score difference with first non-orthologous sequence - L.braziliensis:210 P.jiroveci:210

A4H7J0              	100.00%		L0PFU1              	100.00%
Bootstrap support for A4H7J0 as seed ortholog is 100%.
Bootstrap support for L0PFU1 as seed ortholog is 100%.

Group of orthologs #330. Best score 210 bits
Score difference with first non-orthologous sequence - L.braziliensis:210 P.jiroveci:210

A4HMW1              	100.00%		L0P8M3              	100.00%
Bootstrap support for A4HMW1 as seed ortholog is 100%.
Bootstrap support for L0P8M3 as seed ortholog is 100%.

Group of orthologs #331. Best score 210 bits
Score difference with first non-orthologous sequence - L.braziliensis:210 P.jiroveci:210

A4HHN5              	100.00%		L0PEC6              	100.00%
Bootstrap support for A4HHN5 as seed ortholog is 100%.
Bootstrap support for L0PEC6 as seed ortholog is 100%.

Group of orthologs #332. Best score 209 bits
Score difference with first non-orthologous sequence - L.braziliensis:49 P.jiroveci:123

A4H3Y7              	100.00%		L0PG51              	100.00%
Bootstrap support for A4H3Y7 as seed ortholog is 90%.
Bootstrap support for L0PG51 as seed ortholog is 99%.

Group of orthologs #333. Best score 209 bits
Score difference with first non-orthologous sequence - L.braziliensis:209 P.jiroveci:209

A4HCK3              	100.00%		L0PA72              	100.00%
Bootstrap support for A4HCK3 as seed ortholog is 100%.
Bootstrap support for L0PA72 as seed ortholog is 100%.

Group of orthologs #334. Best score 208 bits
Score difference with first non-orthologous sequence - L.braziliensis:208 P.jiroveci:208

A4HKS3              	100.00%		L0PC62              	100.00%
Bootstrap support for A4HKS3 as seed ortholog is 100%.
Bootstrap support for L0PC62 as seed ortholog is 100%.

Group of orthologs #335. Best score 208 bits
Score difference with first non-orthologous sequence - L.braziliensis:208 P.jiroveci:48

A4HQ25              	100.00%		L0PAQ7              	100.00%
Bootstrap support for A4HQ25 as seed ortholog is 100%.
Bootstrap support for L0PAQ7 as seed ortholog is 94%.

Group of orthologs #336. Best score 207 bits
Score difference with first non-orthologous sequence - L.braziliensis:207 P.jiroveci:207

A4H9A8              	100.00%		L0PIV4              	100.00%
Bootstrap support for A4H9A8 as seed ortholog is 100%.
Bootstrap support for L0PIV4 as seed ortholog is 100%.

Group of orthologs #337. Best score 207 bits
Score difference with first non-orthologous sequence - L.braziliensis:207 P.jiroveci:207

A4HCH8              	100.00%		L0PFC9              	100.00%
Bootstrap support for A4HCH8 as seed ortholog is 100%.
Bootstrap support for L0PFC9 as seed ortholog is 100%.

Group of orthologs #338. Best score 207 bits
Score difference with first non-orthologous sequence - L.braziliensis:207 P.jiroveci:207

A4HQ53              	100.00%		L0P8V0              	100.00%
Bootstrap support for A4HQ53 as seed ortholog is 100%.
Bootstrap support for L0P8V0 as seed ortholog is 100%.

Group of orthologs #339. Best score 206 bits
Score difference with first non-orthologous sequence - L.braziliensis:206 P.jiroveci:206

A4H9U5              	100.00%		L0P8P0              	100.00%
Bootstrap support for A4H9U5 as seed ortholog is 100%.
Bootstrap support for L0P8P0 as seed ortholog is 100%.

Group of orthologs #340. Best score 205 bits
Score difference with first non-orthologous sequence - L.braziliensis:205 P.jiroveci:205

A4HE86              	100.00%		L0PB18              	100.00%
Bootstrap support for A4HE86 as seed ortholog is 100%.
Bootstrap support for L0PB18 as seed ortholog is 100%.

Group of orthologs #341. Best score 204 bits
Score difference with first non-orthologous sequence - L.braziliensis:204 P.jiroveci:204

A4HIV1              	100.00%		L0P7H2              	100.00%
A4HML1              	100.00%		
Bootstrap support for A4HIV1 as seed ortholog is 100%.
Bootstrap support for A4HML1 as seed ortholog is 100%.
Bootstrap support for L0P7H2 as seed ortholog is 100%.

Group of orthologs #342. Best score 204 bits
Score difference with first non-orthologous sequence - L.braziliensis:204 P.jiroveci:204

A4H4F9              	100.00%		L0PBC5              	100.00%
Bootstrap support for A4H4F9 as seed ortholog is 100%.
Bootstrap support for L0PBC5 as seed ortholog is 100%.

Group of orthologs #343. Best score 203 bits
Score difference with first non-orthologous sequence - L.braziliensis:116 P.jiroveci:203

A4HGG0              	100.00%		L0PGL1              	100.00%
Bootstrap support for A4HGG0 as seed ortholog is 99%.
Bootstrap support for L0PGL1 as seed ortholog is 100%.

Group of orthologs #344. Best score 202 bits
Score difference with first non-orthologous sequence - L.braziliensis:99 P.jiroveci:103

A4HA61              	100.00%		L0PC38              	100.00%
Bootstrap support for A4HA61 as seed ortholog is 99%.
Bootstrap support for L0PC38 as seed ortholog is 98%.

Group of orthologs #345. Best score 201 bits
Score difference with first non-orthologous sequence - L.braziliensis:201 P.jiroveci:201

A4H7H5              	100.00%		L0PGS3              	100.00%
                    	       		L0PFY3              	11.53%
Bootstrap support for A4H7H5 as seed ortholog is 100%.
Bootstrap support for L0PGS3 as seed ortholog is 100%.

Group of orthologs #346. Best score 201 bits
Score difference with first non-orthologous sequence - L.braziliensis:110 P.jiroveci:89

A4H5R9              	100.00%		L0PFN2              	100.00%
Bootstrap support for A4H5R9 as seed ortholog is 100%.
Bootstrap support for L0PFN2 as seed ortholog is 100%.

Group of orthologs #347. Best score 201 bits
Score difference with first non-orthologous sequence - L.braziliensis:201 P.jiroveci:201

A4HPM4              	100.00%		L0PGV8              	100.00%
Bootstrap support for A4HPM4 as seed ortholog is 100%.
Bootstrap support for L0PGV8 as seed ortholog is 100%.

Group of orthologs #348. Best score 200 bits
Score difference with first non-orthologous sequence - L.braziliensis:200 P.jiroveci:200

A4H5T3              	100.00%		L0PBN3              	100.00%
Bootstrap support for A4H5T3 as seed ortholog is 100%.
Bootstrap support for L0PBN3 as seed ortholog is 100%.

Group of orthologs #349. Best score 199 bits
Score difference with first non-orthologous sequence - L.braziliensis:199 P.jiroveci:199

A4H5I2              	100.00%		L0P8J0              	100.00%
Bootstrap support for A4H5I2 as seed ortholog is 100%.
Bootstrap support for L0P8J0 as seed ortholog is 100%.

Group of orthologs #350. Best score 199 bits
Score difference with first non-orthologous sequence - L.braziliensis:199 P.jiroveci:199

A4HB27              	100.00%		L0PG44              	100.00%
Bootstrap support for A4HB27 as seed ortholog is 100%.
Bootstrap support for L0PG44 as seed ortholog is 100%.

Group of orthologs #351. Best score 199 bits
Score difference with first non-orthologous sequence - L.braziliensis:199 P.jiroveci:199

A4HBW6              	100.00%		L0PHL1              	100.00%
Bootstrap support for A4HBW6 as seed ortholog is 100%.
Bootstrap support for L0PHL1 as seed ortholog is 100%.

Group of orthologs #352. Best score 198 bits
Score difference with first non-orthologous sequence - L.braziliensis:198 P.jiroveci:198

A4H4D1              	100.00%		L0PCG8              	100.00%
Bootstrap support for A4H4D1 as seed ortholog is 100%.
Bootstrap support for L0PCG8 as seed ortholog is 100%.

Group of orthologs #353. Best score 198 bits
Score difference with first non-orthologous sequence - L.braziliensis:198 P.jiroveci:198

A4HC88              	100.00%		L0PED5              	100.00%
Bootstrap support for A4HC88 as seed ortholog is 100%.
Bootstrap support for L0PED5 as seed ortholog is 100%.

Group of orthologs #354. Best score 197 bits
Score difference with first non-orthologous sequence - L.braziliensis:197 P.jiroveci:197

A4HAV3              	100.00%		L0P9W3              	100.00%
Bootstrap support for A4HAV3 as seed ortholog is 100%.
Bootstrap support for L0P9W3 as seed ortholog is 100%.

Group of orthologs #355. Best score 197 bits
Score difference with first non-orthologous sequence - L.braziliensis:197 P.jiroveci:197

A4HN23              	100.00%		L0PCU0              	100.00%
Bootstrap support for A4HN23 as seed ortholog is 100%.
Bootstrap support for L0PCU0 as seed ortholog is 100%.

Group of orthologs #356. Best score 196 bits
Score difference with first non-orthologous sequence - L.braziliensis:196 P.jiroveci:196

A4H5S2              	100.00%		L0P9G9              	100.00%
Bootstrap support for A4H5S2 as seed ortholog is 100%.
Bootstrap support for L0P9G9 as seed ortholog is 100%.

Group of orthologs #357. Best score 196 bits
Score difference with first non-orthologous sequence - L.braziliensis:196 P.jiroveci:196

A4HFD7              	100.00%		L0P9G1              	100.00%
Bootstrap support for A4HFD7 as seed ortholog is 100%.
Bootstrap support for L0P9G1 as seed ortholog is 100%.

Group of orthologs #358. Best score 195 bits
Score difference with first non-orthologous sequence - L.braziliensis:195 P.jiroveci:195

A4H9F6              	100.00%		L0PDH2              	100.00%
Bootstrap support for A4H9F6 as seed ortholog is 100%.
Bootstrap support for L0PDH2 as seed ortholog is 100%.

Group of orthologs #359. Best score 194 bits
Score difference with first non-orthologous sequence - L.braziliensis:194 P.jiroveci:194

A4H9Z7              	100.00%		L0PBS5              	100.00%
Bootstrap support for A4H9Z7 as seed ortholog is 100%.
Bootstrap support for L0PBS5 as seed ortholog is 100%.

Group of orthologs #360. Best score 194 bits
Score difference with first non-orthologous sequence - L.braziliensis:118 P.jiroveci:194

A4HFU1              	100.00%		L0PDZ2              	100.00%
Bootstrap support for A4HFU1 as seed ortholog is 99%.
Bootstrap support for L0PDZ2 as seed ortholog is 100%.

Group of orthologs #361. Best score 194 bits
Score difference with first non-orthologous sequence - L.braziliensis:50 P.jiroveci:23

A4HP61              	100.00%		L0PIP5              	100.00%
Bootstrap support for A4HP61 as seed ortholog is 82%.
Bootstrap support for L0PIP5 as seed ortholog is 60%.
Alternative seed ortholog is L0PA63 (23 bits away from this cluster)

Group of orthologs #362. Best score 193 bits
Score difference with first non-orthologous sequence - L.braziliensis:193 P.jiroveci:193

A4HLQ3              	100.00%		L0P9B8              	100.00%
Bootstrap support for A4HLQ3 as seed ortholog is 100%.
Bootstrap support for L0P9B8 as seed ortholog is 100%.

Group of orthologs #363. Best score 192 bits
Score difference with first non-orthologous sequence - L.braziliensis:85 P.jiroveci:192

A4HAC3              	100.00%		L0PEX1              	100.00%
Bootstrap support for A4HAC3 as seed ortholog is 99%.
Bootstrap support for L0PEX1 as seed ortholog is 100%.

Group of orthologs #364. Best score 192 bits
Score difference with first non-orthologous sequence - L.braziliensis:192 P.jiroveci:192

A4HAL5              	100.00%		L0PEN7              	100.00%
Bootstrap support for A4HAL5 as seed ortholog is 100%.
Bootstrap support for L0PEN7 as seed ortholog is 100%.

Group of orthologs #365. Best score 190 bits
Score difference with first non-orthologous sequence - L.braziliensis:19 P.jiroveci:33

A4H7X5              	100.00%		L0PDS3              	100.00%
A4HCD3              	15.87%		
A4HCD2              	14.02%		
Bootstrap support for A4H7X5 as seed ortholog is 69%.
Alternative seed ortholog is A4H794 (19 bits away from this cluster)
Bootstrap support for L0PDS3 as seed ortholog is 86%.

Group of orthologs #366. Best score 190 bits
Score difference with first non-orthologous sequence - L.braziliensis:190 P.jiroveci:190

A4H434              	100.00%		L0PFX1              	100.00%
Bootstrap support for A4H434 as seed ortholog is 100%.
Bootstrap support for L0PFX1 as seed ortholog is 100%.

Group of orthologs #367. Best score 190 bits
Score difference with first non-orthologous sequence - L.braziliensis:24 P.jiroveci:190

A4HI44              	100.00%		L0PG86              	100.00%
Bootstrap support for A4HI44 as seed ortholog is 73%.
Alternative seed ortholog is A4HB78 (24 bits away from this cluster)
Bootstrap support for L0PG86 as seed ortholog is 100%.

Group of orthologs #368. Best score 189 bits
Score difference with first non-orthologous sequence - L.braziliensis:189 P.jiroveci:189

A4H6F2              	100.00%		L0P9S5              	100.00%
A4HPI7              	100.00%		
Bootstrap support for A4H6F2 as seed ortholog is 100%.
Bootstrap support for A4HPI7 as seed ortholog is 100%.
Bootstrap support for L0P9S5 as seed ortholog is 100%.

Group of orthologs #369. Best score 189 bits
Score difference with first non-orthologous sequence - L.braziliensis:189 P.jiroveci:189

A4HDF5              	100.00%		L0PIN5              	100.00%
                    	       		L0PE52              	91.84%
Bootstrap support for A4HDF5 as seed ortholog is 100%.
Bootstrap support for L0PIN5 as seed ortholog is 100%.

Group of orthologs #370. Best score 189 bits
Score difference with first non-orthologous sequence - L.braziliensis:5 P.jiroveci:84

A4HED7              	100.00%		L0PEF1              	100.00%
Bootstrap support for A4HED7 as seed ortholog is 55%.
Alternative seed ortholog is A4HN71 (5 bits away from this cluster)
Bootstrap support for L0PEF1 as seed ortholog is 98%.

Group of orthologs #371. Best score 189 bits
Score difference with first non-orthologous sequence - L.braziliensis:189 P.jiroveci:189

E9AIG9              	100.00%		L0PF73              	100.00%
Bootstrap support for E9AIG9 as seed ortholog is 100%.
Bootstrap support for L0PF73 as seed ortholog is 100%.

Group of orthologs #372. Best score 188 bits
Score difference with first non-orthologous sequence - L.braziliensis:188 P.jiroveci:188

A4HIY3              	100.00%		L0PB66              	100.00%
A4H6P5              	94.74%		
Bootstrap support for A4HIY3 as seed ortholog is 100%.
Bootstrap support for L0PB66 as seed ortholog is 100%.

Group of orthologs #373. Best score 188 bits
Score difference with first non-orthologous sequence - L.braziliensis:69 P.jiroveci:188

A4HNB2              	100.00%		L0PAW4              	100.00%
A4HNB1              	87.95%		
Bootstrap support for A4HNB2 as seed ortholog is 96%.
Bootstrap support for L0PAW4 as seed ortholog is 100%.

Group of orthologs #374. Best score 188 bits
Score difference with first non-orthologous sequence - L.braziliensis:188 P.jiroveci:122

A4HDJ1              	100.00%		L0PHN0              	100.00%
Bootstrap support for A4HDJ1 as seed ortholog is 100%.
Bootstrap support for L0PHN0 as seed ortholog is 99%.

Group of orthologs #375. Best score 188 bits
Score difference with first non-orthologous sequence - L.braziliensis:188 P.jiroveci:188

A4HID4              	100.00%		L0PHK5              	100.00%
Bootstrap support for A4HID4 as seed ortholog is 100%.
Bootstrap support for L0PHK5 as seed ortholog is 100%.

Group of orthologs #376. Best score 186 bits
Score difference with first non-orthologous sequence - L.braziliensis:186 P.jiroveci:186

A4H875              	100.00%		L0PAG1              	100.00%
Bootstrap support for A4H875 as seed ortholog is 100%.
Bootstrap support for L0PAG1 as seed ortholog is 100%.

Group of orthologs #377. Best score 186 bits
Score difference with first non-orthologous sequence - L.braziliensis:71 P.jiroveci:186

A4HI50              	100.00%		L0P992              	100.00%
Bootstrap support for A4HI50 as seed ortholog is 90%.
Bootstrap support for L0P992 as seed ortholog is 100%.

Group of orthologs #378. Best score 186 bits
Score difference with first non-orthologous sequence - L.braziliensis:186 P.jiroveci:186

A4HQG0              	100.00%		L0PH55              	100.00%
Bootstrap support for A4HQG0 as seed ortholog is 100%.
Bootstrap support for L0PH55 as seed ortholog is 100%.

Group of orthologs #379. Best score 185 bits
Score difference with first non-orthologous sequence - L.braziliensis:185 P.jiroveci:185

A4HGA3              	100.00%		L0PGD7              	100.00%
                    	       		L0PGQ0              	69.20%
Bootstrap support for A4HGA3 as seed ortholog is 100%.
Bootstrap support for L0PGD7 as seed ortholog is 100%.

Group of orthologs #380. Best score 185 bits
Score difference with first non-orthologous sequence - L.braziliensis:185 P.jiroveci:185

A4HC91              	100.00%		L0PAE8              	100.00%
Bootstrap support for A4HC91 as seed ortholog is 100%.
Bootstrap support for L0PAE8 as seed ortholog is 100%.

Group of orthologs #381. Best score 184 bits
Score difference with first non-orthologous sequence - L.braziliensis:184 P.jiroveci:184

A4HFR6              	100.00%		L0PHG7              	100.00%
A4HFR5              	99.55%		
Bootstrap support for A4HFR6 as seed ortholog is 100%.
Bootstrap support for L0PHG7 as seed ortholog is 100%.

Group of orthologs #382. Best score 184 bits
Score difference with first non-orthologous sequence - L.braziliensis:184 P.jiroveci:184

A4H782              	100.00%		L0PBI2              	100.00%
Bootstrap support for A4H782 as seed ortholog is 100%.
Bootstrap support for L0PBI2 as seed ortholog is 100%.

Group of orthologs #383. Best score 184 bits
Score difference with first non-orthologous sequence - L.braziliensis:184 P.jiroveci:184

A4HNV2              	100.00%		L0PE58              	100.00%
Bootstrap support for A4HNV2 as seed ortholog is 100%.
Bootstrap support for L0PE58 as seed ortholog is 100%.

Group of orthologs #384. Best score 183 bits
Score difference with first non-orthologous sequence - L.braziliensis:61 P.jiroveci:61

Q8T6H9              	100.00%		L0P8I7              	100.00%
Bootstrap support for Q8T6H9 as seed ortholog is 96%.
Bootstrap support for L0P8I7 as seed ortholog is 98%.

Group of orthologs #385. Best score 182 bits
Score difference with first non-orthologous sequence - L.braziliensis:66 P.jiroveci:182

A4HCL8              	100.00%		L0PDB8              	100.00%
A4HLM4              	19.66%		
A4HE26              	13.51%		
A4HIW9              	8.85%		
Bootstrap support for A4HCL8 as seed ortholog is 97%.
Bootstrap support for L0PDB8 as seed ortholog is 100%.

Group of orthologs #386. Best score 182 bits
Score difference with first non-orthologous sequence - L.braziliensis:182 P.jiroveci:182

A4HIA0              	100.00%		L0P949              	100.00%
Bootstrap support for A4HIA0 as seed ortholog is 100%.
Bootstrap support for L0P949 as seed ortholog is 100%.

Group of orthologs #387. Best score 180 bits
Score difference with first non-orthologous sequence - L.braziliensis:127 P.jiroveci:180

A4H6R7              	100.00%		L0P839              	100.00%
Bootstrap support for A4H6R7 as seed ortholog is 99%.
Bootstrap support for L0P839 as seed ortholog is 100%.

Group of orthologs #388. Best score 179 bits
Score difference with first non-orthologous sequence - L.braziliensis:113 P.jiroveci:114

A4H5Z3              	100.00%		L0PFK0              	100.00%
Bootstrap support for A4H5Z3 as seed ortholog is 99%.
Bootstrap support for L0PFK0 as seed ortholog is 99%.

Group of orthologs #389. Best score 178 bits
Score difference with first non-orthologous sequence - L.braziliensis:178 P.jiroveci:178

A4HLL7              	100.00%		L0PBE8              	100.00%
A4HN39              	6.55%		
Bootstrap support for A4HLL7 as seed ortholog is 100%.
Bootstrap support for L0PBE8 as seed ortholog is 100%.

Group of orthologs #390. Best score 178 bits
Score difference with first non-orthologous sequence - L.braziliensis:178 P.jiroveci:178

A4H8B3              	100.00%		L0PEC1              	100.00%
Bootstrap support for A4H8B3 as seed ortholog is 100%.
Bootstrap support for L0PEC1 as seed ortholog is 100%.

Group of orthologs #391. Best score 177 bits
Score difference with first non-orthologous sequence - L.braziliensis:177 P.jiroveci:177

A4H6J5              	100.00%		L0PB28              	100.00%
Bootstrap support for A4H6J5 as seed ortholog is 100%.
Bootstrap support for L0PB28 as seed ortholog is 100%.

Group of orthologs #392. Best score 177 bits
Score difference with first non-orthologous sequence - L.braziliensis:177 P.jiroveci:177

A4H9L7              	100.00%		L0PAE9              	100.00%
Bootstrap support for A4H9L7 as seed ortholog is 100%.
Bootstrap support for L0PAE9 as seed ortholog is 100%.

Group of orthologs #393. Best score 177 bits
Score difference with first non-orthologous sequence - L.braziliensis:177 P.jiroveci:110

A4HMG0              	100.00%		L0PBY2              	100.00%
Bootstrap support for A4HMG0 as seed ortholog is 100%.
Bootstrap support for L0PBY2 as seed ortholog is 99%.

Group of orthologs #394. Best score 177 bits
Score difference with first non-orthologous sequence - L.braziliensis:177 P.jiroveci:177

A4HMJ1              	100.00%		L0PF71              	100.00%
Bootstrap support for A4HMJ1 as seed ortholog is 100%.
Bootstrap support for L0PF71 as seed ortholog is 100%.

Group of orthologs #395. Best score 176 bits
Score difference with first non-orthologous sequence - L.braziliensis:60 P.jiroveci:176

A4H7D9              	100.00%		L0PEW5              	100.00%
Bootstrap support for A4H7D9 as seed ortholog is 54%.
Alternative seed ortholog is A4HEP8 (60 bits away from this cluster)
Bootstrap support for L0PEW5 as seed ortholog is 100%.

Group of orthologs #396. Best score 176 bits
Score difference with first non-orthologous sequence - L.braziliensis:84 P.jiroveci:176

A4HB28              	100.00%		L0PC02              	100.00%
Bootstrap support for A4HB28 as seed ortholog is 96%.
Bootstrap support for L0PC02 as seed ortholog is 100%.

Group of orthologs #397. Best score 176 bits
Score difference with first non-orthologous sequence - L.braziliensis:59 P.jiroveci:176

A4HGU9              	100.00%		L0P9R7              	100.00%
Bootstrap support for A4HGU9 as seed ortholog is 98%.
Bootstrap support for L0P9R7 as seed ortholog is 100%.

Group of orthologs #398. Best score 175 bits
Score difference with first non-orthologous sequence - L.braziliensis:31 P.jiroveci:19

A4HE46              	100.00%		L0PB76              	100.00%
A4HKX5              	19.43%		
Bootstrap support for A4HE46 as seed ortholog is 77%.
Bootstrap support for L0PB76 as seed ortholog is 68%.
Alternative seed ortholog is L0PDD1 (19 bits away from this cluster)

Group of orthologs #399. Best score 175 bits
Score difference with first non-orthologous sequence - L.braziliensis:175 P.jiroveci:175

A4HNE9              	100.00%		L0PBV6              	100.00%
Bootstrap support for A4HNE9 as seed ortholog is 100%.
Bootstrap support for L0PBV6 as seed ortholog is 100%.

Group of orthologs #400. Best score 175 bits
Score difference with first non-orthologous sequence - L.braziliensis:48 P.jiroveci:175

A4HJF7              	100.00%		L0PFZ1              	100.00%
Bootstrap support for A4HJF7 as seed ortholog is 84%.
Bootstrap support for L0PFZ1 as seed ortholog is 100%.

Group of orthologs #401. Best score 174 bits
Score difference with first non-orthologous sequence - L.braziliensis:174 P.jiroveci:174

A4HD32              	100.00%		L0P8Y0              	100.00%
Bootstrap support for A4HD32 as seed ortholog is 100%.
Bootstrap support for L0P8Y0 as seed ortholog is 100%.

Group of orthologs #402. Best score 174 bits
Score difference with first non-orthologous sequence - L.braziliensis:174 P.jiroveci:174

A4HMH9              	100.00%		L0PCL6              	100.00%
Bootstrap support for A4HMH9 as seed ortholog is 100%.
Bootstrap support for L0PCL6 as seed ortholog is 100%.

Group of orthologs #403. Best score 173 bits
Score difference with first non-orthologous sequence - L.braziliensis:173 P.jiroveci:173

A4HCH2              	100.00%		L0PHM9              	100.00%
Bootstrap support for A4HCH2 as seed ortholog is 100%.
Bootstrap support for L0PHM9 as seed ortholog is 100%.

Group of orthologs #404. Best score 172 bits
Score difference with first non-orthologous sequence - L.braziliensis:9 P.jiroveci:41

A4HM52              	100.00%		L0PGT3              	100.00%
Bootstrap support for A4HM52 as seed ortholog is 64%.
Alternative seed ortholog is A4HH98 (9 bits away from this cluster)
Bootstrap support for L0PGT3 as seed ortholog is 95%.

Group of orthologs #405. Best score 171 bits
Score difference with first non-orthologous sequence - L.braziliensis:171 P.jiroveci:171

A4HDT2              	100.00%		L0PBZ6              	100.00%
A4HMP1              	100.00%		
Bootstrap support for A4HDT2 as seed ortholog is 100%.
Bootstrap support for A4HMP1 as seed ortholog is 100%.
Bootstrap support for L0PBZ6 as seed ortholog is 100%.

Group of orthologs #406. Best score 171 bits
Score difference with first non-orthologous sequence - L.braziliensis:64 P.jiroveci:84

A4H3D5              	100.00%		L0P9F9              	100.00%
Bootstrap support for A4H3D5 as seed ortholog is 99%.
Bootstrap support for L0P9F9 as seed ortholog is 99%.

Group of orthologs #407. Best score 171 bits
Score difference with first non-orthologous sequence - L.braziliensis:171 P.jiroveci:171

A4H885              	100.00%		L0PAM5              	100.00%
Bootstrap support for A4H885 as seed ortholog is 100%.
Bootstrap support for L0PAM5 as seed ortholog is 100%.

Group of orthologs #408. Best score 171 bits
Score difference with first non-orthologous sequence - L.braziliensis:171 P.jiroveci:171

A4HKK5              	100.00%		L0PDG3              	100.00%
Bootstrap support for A4HKK5 as seed ortholog is 100%.
Bootstrap support for L0PDG3 as seed ortholog is 100%.

Group of orthologs #409. Best score 170 bits
Score difference with first non-orthologous sequence - L.braziliensis:80 P.jiroveci:78

A4H8A4              	100.00%		L0PHE4              	100.00%
Bootstrap support for A4H8A4 as seed ortholog is 99%.
Bootstrap support for L0PHE4 as seed ortholog is 96%.

Group of orthologs #410. Best score 170 bits
Score difference with first non-orthologous sequence - L.braziliensis:170 P.jiroveci:170

A4HF36              	100.00%		L0PGD6              	100.00%
Bootstrap support for A4HF36 as seed ortholog is 100%.
Bootstrap support for L0PGD6 as seed ortholog is 100%.

Group of orthologs #411. Best score 170 bits
Score difference with first non-orthologous sequence - L.braziliensis:170 P.jiroveci:170

A4HQA6              	100.00%		L0PEX9              	100.00%
Bootstrap support for A4HQA6 as seed ortholog is 100%.
Bootstrap support for L0PEX9 as seed ortholog is 100%.

Group of orthologs #412. Best score 169 bits
Score difference with first non-orthologous sequence - L.braziliensis:169 P.jiroveci:169

A4HDR9              	100.00%		L0PC53              	100.00%
Bootstrap support for A4HDR9 as seed ortholog is 100%.
Bootstrap support for L0PC53 as seed ortholog is 100%.

Group of orthologs #413. Best score 169 bits
Score difference with first non-orthologous sequence - L.braziliensis:121 P.jiroveci:169

A4HJE3              	100.00%		L0PA09              	100.00%
Bootstrap support for A4HJE3 as seed ortholog is 99%.
Bootstrap support for L0PA09 as seed ortholog is 100%.

Group of orthologs #414. Best score 168 bits
Score difference with first non-orthologous sequence - L.braziliensis:33 P.jiroveci:88

A4HHN1              	100.00%		L0PB47              	100.00%
Bootstrap support for A4HHN1 as seed ortholog is 80%.
Bootstrap support for L0PB47 as seed ortholog is 99%.

Group of orthologs #415. Best score 168 bits
Score difference with first non-orthologous sequence - L.braziliensis:168 P.jiroveci:47

A4HPC7              	100.00%		L0PEG1              	100.00%
Bootstrap support for A4HPC7 as seed ortholog is 100%.
Bootstrap support for L0PEG1 as seed ortholog is 84%.

Group of orthologs #416. Best score 167 bits
Score difference with first non-orthologous sequence - L.braziliensis:108 P.jiroveci:90

A4HHZ2              	100.00%		L0PGE3              	100.00%
                    	       		L0PEY7              	55.04%
Bootstrap support for A4HHZ2 as seed ortholog is 99%.
Bootstrap support for L0PGE3 as seed ortholog is 98%.

Group of orthologs #417. Best score 167 bits
Score difference with first non-orthologous sequence - L.braziliensis:29 P.jiroveci:167

A4HHF6              	100.00%		L0PAP9              	100.00%
Bootstrap support for A4HHF6 as seed ortholog is 94%.
Bootstrap support for L0PAP9 as seed ortholog is 100%.

Group of orthologs #418. Best score 166 bits
Score difference with first non-orthologous sequence - L.braziliensis:41 P.jiroveci:10

A4H9H4              	100.00%		L0PCJ7              	100.00%
A4H539              	54.05%		
Bootstrap support for A4H9H4 as seed ortholog is 90%.
Bootstrap support for L0PCJ7 as seed ortholog is 59%.
Alternative seed ortholog is L0PCN5 (10 bits away from this cluster)

Group of orthologs #419. Best score 166 bits
Score difference with first non-orthologous sequence - L.braziliensis:9 P.jiroveci:166

A4HHN8              	100.00%		L0P967              	100.00%
A4HHN7              	38.59%		
Bootstrap support for A4HHN8 as seed ortholog is 55%.
Alternative seed ortholog is A4H337 (9 bits away from this cluster)
Bootstrap support for L0P967 as seed ortholog is 100%.

Group of orthologs #420. Best score 166 bits
Score difference with first non-orthologous sequence - L.braziliensis:97 P.jiroveci:64

A4H402              	100.00%		L0PAS2              	100.00%
Bootstrap support for A4H402 as seed ortholog is 99%.
Bootstrap support for L0PAS2 as seed ortholog is 99%.

Group of orthologs #421. Best score 166 bits
Score difference with first non-orthologous sequence - L.braziliensis:166 P.jiroveci:166

A4HEM6              	100.00%		L0P8J2              	100.00%
Bootstrap support for A4HEM6 as seed ortholog is 100%.
Bootstrap support for L0P8J2 as seed ortholog is 100%.

Group of orthologs #422. Best score 166 bits
Score difference with first non-orthologous sequence - L.braziliensis:166 P.jiroveci:166

A4HDQ1              	100.00%		L0PBX2              	100.00%
Bootstrap support for A4HDQ1 as seed ortholog is 100%.
Bootstrap support for L0PBX2 as seed ortholog is 100%.

Group of orthologs #423. Best score 166 bits
Score difference with first non-orthologous sequence - L.braziliensis:166 P.jiroveci:90

A4HEC3              	100.00%		L0PCG1              	100.00%
Bootstrap support for A4HEC3 as seed ortholog is 100%.
Bootstrap support for L0PCG1 as seed ortholog is 99%.

Group of orthologs #424. Best score 166 bits
Score difference with first non-orthologous sequence - L.braziliensis:166 P.jiroveci:166

A4HFG9              	100.00%		L0PCB3              	100.00%
Bootstrap support for A4HFG9 as seed ortholog is 100%.
Bootstrap support for L0PCB3 as seed ortholog is 100%.

Group of orthologs #425. Best score 166 bits
Score difference with first non-orthologous sequence - L.braziliensis:95 P.jiroveci:121

A4HFQ0              	100.00%		L0PE04              	100.00%
Bootstrap support for A4HFQ0 as seed ortholog is 99%.
Bootstrap support for L0PE04 as seed ortholog is 99%.

Group of orthologs #426. Best score 166 bits
Score difference with first non-orthologous sequence - L.braziliensis:166 P.jiroveci:166

A4HPU7              	100.00%		L0P7V1              	100.00%
Bootstrap support for A4HPU7 as seed ortholog is 100%.
Bootstrap support for L0P7V1 as seed ortholog is 100%.

Group of orthologs #427. Best score 166 bits
Score difference with first non-orthologous sequence - L.braziliensis:166 P.jiroveci:166

E9AI81              	100.00%		L0PBJ2              	100.00%
Bootstrap support for E9AI81 as seed ortholog is 100%.
Bootstrap support for L0PBJ2 as seed ortholog is 100%.

Group of orthologs #428. Best score 165 bits
Score difference with first non-orthologous sequence - L.braziliensis:46 P.jiroveci:14

A4HKJ3              	100.00%		L0P8M4              	100.00%
A4H506              	10.89%		
Bootstrap support for A4HKJ3 as seed ortholog is 95%.
Bootstrap support for L0P8M4 as seed ortholog is 71%.
Alternative seed ortholog is L0PGP6 (14 bits away from this cluster)

Group of orthologs #429. Best score 165 bits
Score difference with first non-orthologous sequence - L.braziliensis:165 P.jiroveci:165

A4HLW5              	100.00%		L0PB68              	100.00%
                    	       		L0PCQ8              	26.21%
Bootstrap support for A4HLW5 as seed ortholog is 100%.
Bootstrap support for L0PB68 as seed ortholog is 100%.

Group of orthologs #430. Best score 165 bits
Score difference with first non-orthologous sequence - L.braziliensis:165 P.jiroveci:165

A4H9F9              	100.00%		L0PFN4              	100.00%
Bootstrap support for A4H9F9 as seed ortholog is 100%.
Bootstrap support for L0PFN4 as seed ortholog is 100%.

Group of orthologs #431. Best score 164 bits
Score difference with first non-orthologous sequence - L.braziliensis:164 P.jiroveci:164

A4H9J8              	100.00%		L0PHK3              	100.00%
Bootstrap support for A4H9J8 as seed ortholog is 100%.
Bootstrap support for L0PHK3 as seed ortholog is 100%.

Group of orthologs #432. Best score 162 bits
Score difference with first non-orthologous sequence - L.braziliensis:162 P.jiroveci:162

A4H3R0              	100.00%		L0PFI2              	100.00%
Bootstrap support for A4H3R0 as seed ortholog is 100%.
Bootstrap support for L0PFI2 as seed ortholog is 100%.

Group of orthologs #433. Best score 162 bits
Score difference with first non-orthologous sequence - L.braziliensis:162 P.jiroveci:162

A4HM77              	100.00%		L0PFL8              	100.00%
Bootstrap support for A4HM77 as seed ortholog is 100%.
Bootstrap support for L0PFL8 as seed ortholog is 100%.

Group of orthologs #434. Best score 162 bits
Score difference with first non-orthologous sequence - L.braziliensis:162 P.jiroveci:162

A4HQH3              	100.00%		L0PH54              	100.00%
Bootstrap support for A4HQH3 as seed ortholog is 100%.
Bootstrap support for L0PH54 as seed ortholog is 100%.

Group of orthologs #435. Best score 161 bits
Score difference with first non-orthologous sequence - L.braziliensis:161 P.jiroveci:161

A4H4G5              	100.00%		L0P9I3              	100.00%
Bootstrap support for A4H4G5 as seed ortholog is 100%.
Bootstrap support for L0P9I3 as seed ortholog is 100%.

Group of orthologs #436. Best score 161 bits
Score difference with first non-orthologous sequence - L.braziliensis:161 P.jiroveci:161

A4H524              	100.00%		L0PBT3              	100.00%
Bootstrap support for A4H524 as seed ortholog is 100%.
Bootstrap support for L0PBT3 as seed ortholog is 100%.

Group of orthologs #437. Best score 161 bits
Score difference with first non-orthologous sequence - L.braziliensis:68 P.jiroveci:24

A4H666              	100.00%		L0PDA0              	100.00%
Bootstrap support for A4H666 as seed ortholog is 97%.
Bootstrap support for L0PDA0 as seed ortholog is 75%.

Group of orthologs #438. Best score 161 bits
Score difference with first non-orthologous sequence - L.braziliensis:74 P.jiroveci:161

A4HDC6              	100.00%		L0PEN4              	100.00%
Bootstrap support for A4HDC6 as seed ortholog is 96%.
Bootstrap support for L0PEN4 as seed ortholog is 100%.

Group of orthologs #439. Best score 161 bits
Score difference with first non-orthologous sequence - L.braziliensis:161 P.jiroveci:161

A4HNI6              	100.00%		L0PF92              	100.00%
Bootstrap support for A4HNI6 as seed ortholog is 100%.
Bootstrap support for L0PF92 as seed ortholog is 100%.

Group of orthologs #440. Best score 160 bits
Score difference with first non-orthologous sequence - L.braziliensis:160 P.jiroveci:160

A4HA79              	100.00%		L0PCD9              	100.00%
A4HA75              	95.78%		
A4HA82              	94.46%		
A4HA80              	81.33%		
A4HA76              	66.14%		
A4HA81              	65.66%		
Bootstrap support for A4HA79 as seed ortholog is 100%.
Bootstrap support for L0PCD9 as seed ortholog is 100%.

Group of orthologs #441. Best score 160 bits
Score difference with first non-orthologous sequence - L.braziliensis:160 P.jiroveci:160

A4H4K5              	100.00%		L0PC18              	100.00%
A4H4K7              	100.00%		
A4H4K8              	47.92%		
Bootstrap support for A4H4K5 as seed ortholog is 100%.
Bootstrap support for A4H4K7 as seed ortholog is 100%.
Bootstrap support for L0PC18 as seed ortholog is 100%.

Group of orthologs #442. Best score 160 bits
Score difference with first non-orthologous sequence - L.braziliensis:160 P.jiroveci:160

A4H3Q3              	100.00%		L0PDC7              	100.00%
Bootstrap support for A4H3Q3 as seed ortholog is 100%.
Bootstrap support for L0PDC7 as seed ortholog is 100%.

Group of orthologs #443. Best score 160 bits
Score difference with first non-orthologous sequence - L.braziliensis:60 P.jiroveci:91

A4H5L7              	100.00%		L0PFE3              	100.00%
Bootstrap support for A4H5L7 as seed ortholog is 94%.
Bootstrap support for L0PFE3 as seed ortholog is 98%.

Group of orthologs #444. Best score 160 bits
Score difference with first non-orthologous sequence - L.braziliensis:160 P.jiroveci:160

A4H8P5              	100.00%		L0PF79              	100.00%
Bootstrap support for A4H8P5 as seed ortholog is 100%.
Bootstrap support for L0PF79 as seed ortholog is 100%.

Group of orthologs #445. Best score 160 bits
Score difference with first non-orthologous sequence - L.braziliensis:58 P.jiroveci:22

A4HFK0              	100.00%		L0PIS9              	100.00%
Bootstrap support for A4HFK0 as seed ortholog is 96%.
Bootstrap support for L0PIS9 as seed ortholog is 79%.

Group of orthologs #446. Best score 159 bits
Score difference with first non-orthologous sequence - L.braziliensis:159 P.jiroveci:159

A4HEH6              	100.00%		L0P919              	100.00%
Bootstrap support for A4HEH6 as seed ortholog is 100%.
Bootstrap support for L0P919 as seed ortholog is 100%.

Group of orthologs #447. Best score 159 bits
Score difference with first non-orthologous sequence - L.braziliensis:159 P.jiroveci:159

A4HC34              	100.00%		L0PGX9              	100.00%
Bootstrap support for A4HC34 as seed ortholog is 100%.
Bootstrap support for L0PGX9 as seed ortholog is 100%.

Group of orthologs #448. Best score 158 bits
Score difference with first non-orthologous sequence - L.braziliensis:158 P.jiroveci:158

A4HA30              	100.00%		L0P9L7              	100.00%
Bootstrap support for A4HA30 as seed ortholog is 100%.
Bootstrap support for L0P9L7 as seed ortholog is 100%.

Group of orthologs #449. Best score 158 bits
Score difference with first non-orthologous sequence - L.braziliensis:92 P.jiroveci:158

A4HG53              	100.00%		L0PB84              	100.00%
Bootstrap support for A4HG53 as seed ortholog is 99%.
Bootstrap support for L0PB84 as seed ortholog is 100%.

Group of orthologs #450. Best score 158 bits
Score difference with first non-orthologous sequence - L.braziliensis:158 P.jiroveci:158

A4HD62              	100.00%		L0PGY0              	100.00%
Bootstrap support for A4HD62 as seed ortholog is 100%.
Bootstrap support for L0PGY0 as seed ortholog is 100%.

Group of orthologs #451. Best score 158 bits
Score difference with first non-orthologous sequence - L.braziliensis:158 P.jiroveci:158

A4HJH5              	100.00%		L0PCV1              	100.00%
Bootstrap support for A4HJH5 as seed ortholog is 100%.
Bootstrap support for L0PCV1 as seed ortholog is 100%.

Group of orthologs #452. Best score 157 bits
Score difference with first non-orthologous sequence - L.braziliensis:157 P.jiroveci:157

A4H8F7              	100.00%		L0P7Q3              	100.00%
Bootstrap support for A4H8F7 as seed ortholog is 100%.
Bootstrap support for L0P7Q3 as seed ortholog is 100%.

Group of orthologs #453. Best score 157 bits
Score difference with first non-orthologous sequence - L.braziliensis:157 P.jiroveci:157

A4H7P4              	100.00%		L0P9T5              	100.00%
Bootstrap support for A4H7P4 as seed ortholog is 100%.
Bootstrap support for L0P9T5 as seed ortholog is 100%.

Group of orthologs #454. Best score 156 bits
Score difference with first non-orthologous sequence - L.braziliensis:156 P.jiroveci:156

E9AIL3              	100.00%		L0P9I0              	100.00%
A4HC02              	95.98%		
Bootstrap support for E9AIL3 as seed ortholog is 100%.
Bootstrap support for L0P9I0 as seed ortholog is 100%.

Group of orthologs #455. Best score 156 bits
Score difference with first non-orthologous sequence - L.braziliensis:156 P.jiroveci:156

A4H561              	100.00%		L0P8K8              	100.00%
Bootstrap support for A4H561 as seed ortholog is 100%.
Bootstrap support for L0P8K8 as seed ortholog is 100%.

Group of orthologs #456. Best score 156 bits
Score difference with first non-orthologous sequence - L.braziliensis:156 P.jiroveci:58

A4HGX7              	100.00%		L0PFY7              	100.00%
Bootstrap support for A4HGX7 as seed ortholog is 100%.
Bootstrap support for L0PFY7 as seed ortholog is 94%.

Group of orthologs #457. Best score 156 bits
Score difference with first non-orthologous sequence - L.braziliensis:156 P.jiroveci:95

A4HK19              	100.00%		L0PDL9              	100.00%
Bootstrap support for A4HK19 as seed ortholog is 100%.
Bootstrap support for L0PDL9 as seed ortholog is 99%.

Group of orthologs #458. Best score 156 bits
Score difference with first non-orthologous sequence - L.braziliensis:156 P.jiroveci:156

A4HI99              	100.00%		L0PGK0              	100.00%
Bootstrap support for A4HI99 as seed ortholog is 100%.
Bootstrap support for L0PGK0 as seed ortholog is 100%.

Group of orthologs #459. Best score 155 bits
Score difference with first non-orthologous sequence - L.braziliensis:155 P.jiroveci:155

A4H9R2              	100.00%		L0PCX5              	100.00%
Bootstrap support for A4H9R2 as seed ortholog is 100%.
Bootstrap support for L0PCX5 as seed ortholog is 100%.

Group of orthologs #460. Best score 155 bits
Score difference with first non-orthologous sequence - L.braziliensis:155 P.jiroveci:155

A4HFS3              	100.00%		L0P8N3              	100.00%
Bootstrap support for A4HFS3 as seed ortholog is 100%.
Bootstrap support for L0P8N3 as seed ortholog is 100%.

Group of orthologs #461. Best score 155 bits
Score difference with first non-orthologous sequence - L.braziliensis:155 P.jiroveci:155

A4HG07              	100.00%		L0PCQ7              	100.00%
Bootstrap support for A4HG07 as seed ortholog is 100%.
Bootstrap support for L0PCQ7 as seed ortholog is 100%.

Group of orthologs #462. Best score 154 bits
Score difference with first non-orthologous sequence - L.braziliensis:154 P.jiroveci:98

A4HQ28              	100.00%		L0P9N5              	100.00%
Bootstrap support for A4HQ28 as seed ortholog is 100%.
Bootstrap support for L0P9N5 as seed ortholog is 100%.

Group of orthologs #463. Best score 154 bits
Score difference with first non-orthologous sequence - L.braziliensis:154 P.jiroveci:154

A4HPQ5              	100.00%		L0PAL2              	100.00%
Bootstrap support for A4HPQ5 as seed ortholog is 100%.
Bootstrap support for L0PAL2 as seed ortholog is 100%.

Group of orthologs #464. Best score 153 bits
Score difference with first non-orthologous sequence - L.braziliensis:153 P.jiroveci:153

A4HFS1              	100.00%		L0PA51              	100.00%
Bootstrap support for A4HFS1 as seed ortholog is 100%.
Bootstrap support for L0PA51 as seed ortholog is 100%.

Group of orthologs #465. Best score 152 bits
Score difference with first non-orthologous sequence - L.braziliensis:152 P.jiroveci:152

A4HL06              	100.00%		L0PBP9              	100.00%
A4HL04              	14.03%		
A4HL05              	11.42%		
Bootstrap support for A4HL06 as seed ortholog is 100%.
Bootstrap support for L0PBP9 as seed ortholog is 100%.

Group of orthologs #466. Best score 152 bits
Score difference with first non-orthologous sequence - L.braziliensis:152 P.jiroveci:152

A4H9E0              	100.00%		L0PH80              	100.00%
Bootstrap support for A4H9E0 as seed ortholog is 100%.
Bootstrap support for L0PH80 as seed ortholog is 100%.

Group of orthologs #467. Best score 152 bits
Score difference with first non-orthologous sequence - L.braziliensis:152 P.jiroveci:152

A4HGS4              	100.00%		L0PHJ7              	100.00%
Bootstrap support for A4HGS4 as seed ortholog is 100%.
Bootstrap support for L0PHJ7 as seed ortholog is 100%.

Group of orthologs #468. Best score 151 bits
Score difference with first non-orthologous sequence - L.braziliensis:151 P.jiroveci:151

A4HQ91              	100.00%		L0PEG2              	100.00%
Bootstrap support for A4HQ91 as seed ortholog is 100%.
Bootstrap support for L0PEG2 as seed ortholog is 100%.

Group of orthologs #469. Best score 149 bits
Score difference with first non-orthologous sequence - L.braziliensis:149 P.jiroveci:149

A4HM43              	100.00%		L0P9G0              	100.00%
A4HCK9              	8.25%		
Bootstrap support for A4HM43 as seed ortholog is 100%.
Bootstrap support for L0P9G0 as seed ortholog is 100%.

Group of orthologs #470. Best score 149 bits
Score difference with first non-orthologous sequence - L.braziliensis:34 P.jiroveci:77

A4HAV0              	100.00%		L0PEX6              	100.00%
Bootstrap support for A4HAV0 as seed ortholog is 89%.
Bootstrap support for L0PEX6 as seed ortholog is 99%.

Group of orthologs #471. Best score 148 bits
Score difference with first non-orthologous sequence - L.braziliensis:148 P.jiroveci:148

A4HQ94              	100.00%		L0P872              	100.00%
Bootstrap support for A4HQ94 as seed ortholog is 100%.
Bootstrap support for L0P872 as seed ortholog is 100%.

Group of orthologs #472. Best score 147 bits
Score difference with first non-orthologous sequence - L.braziliensis:37 P.jiroveci:14

A4HEA1              	100.00%		L0PFK8              	100.00%
Bootstrap support for A4HEA1 as seed ortholog is 75%.
Bootstrap support for L0PFK8 as seed ortholog is 65%.
Alternative seed ortholog is L0PGL7 (14 bits away from this cluster)

Group of orthologs #473. Best score 146 bits
Score difference with first non-orthologous sequence - L.braziliensis:62 P.jiroveci:146

A4H590              	100.00%		L0PGG0              	100.00%
Bootstrap support for A4H590 as seed ortholog is 93%.
Bootstrap support for L0PGG0 as seed ortholog is 100%.

Group of orthologs #474. Best score 146 bits
Score difference with first non-orthologous sequence - L.braziliensis:39 P.jiroveci:17

A4H679              	100.00%		L0PHW8              	100.00%
Bootstrap support for A4H679 as seed ortholog is 97%.
Bootstrap support for L0PHW8 as seed ortholog is 78%.

Group of orthologs #475. Best score 146 bits
Score difference with first non-orthologous sequence - L.braziliensis:146 P.jiroveci:146

A4HGR8              	100.00%		L0PBG0              	100.00%
Bootstrap support for A4HGR8 as seed ortholog is 100%.
Bootstrap support for L0PBG0 as seed ortholog is 100%.

Group of orthologs #476. Best score 146 bits
Score difference with first non-orthologous sequence - L.braziliensis:146 P.jiroveci:146

A4HN32              	100.00%		L0PDW5              	100.00%
Bootstrap support for A4HN32 as seed ortholog is 100%.
Bootstrap support for L0PDW5 as seed ortholog is 100%.

Group of orthologs #477. Best score 145 bits
Score difference with first non-orthologous sequence - L.braziliensis:145 P.jiroveci:145

A4HNI8              	100.00%		L0PD40              	100.00%
Bootstrap support for A4HNI8 as seed ortholog is 100%.
Bootstrap support for L0PD40 as seed ortholog is 100%.

Group of orthologs #478. Best score 144 bits
Score difference with first non-orthologous sequence - L.braziliensis:144 P.jiroveci:144

A4HAN2              	100.00%		L0PA05              	100.00%
Bootstrap support for A4HAN2 as seed ortholog is 100%.
Bootstrap support for L0PA05 as seed ortholog is 100%.

Group of orthologs #479. Best score 144 bits
Score difference with first non-orthologous sequence - L.braziliensis:144 P.jiroveci:144

A4HHL4              	100.00%		L0PA96              	100.00%
Bootstrap support for A4HHL4 as seed ortholog is 100%.
Bootstrap support for L0PA96 as seed ortholog is 100%.

Group of orthologs #480. Best score 143 bits
Score difference with first non-orthologous sequence - L.braziliensis:143 P.jiroveci:143

A4HC32              	100.00%		L0PDU1              	100.00%
Bootstrap support for A4HC32 as seed ortholog is 100%.
Bootstrap support for L0PDU1 as seed ortholog is 100%.

Group of orthologs #481. Best score 143 bits
Score difference with first non-orthologous sequence - L.braziliensis:143 P.jiroveci:143

A4HHP5              	100.00%		L0PC96              	100.00%
Bootstrap support for A4HHP5 as seed ortholog is 100%.
Bootstrap support for L0PC96 as seed ortholog is 100%.

Group of orthologs #482. Best score 143 bits
Score difference with first non-orthologous sequence - L.braziliensis:143 P.jiroveci:143

A4HN50              	100.00%		L0PCA8              	100.00%
Bootstrap support for A4HN50 as seed ortholog is 100%.
Bootstrap support for L0PCA8 as seed ortholog is 100%.

Group of orthologs #483. Best score 143 bits
Score difference with first non-orthologous sequence - L.braziliensis:14 P.jiroveci:48

E9AID8              	100.00%		L0PEA5              	100.00%
Bootstrap support for E9AID8 as seed ortholog is 57%.
Alternative seed ortholog is A4HFC4 (14 bits away from this cluster)
Bootstrap support for L0PEA5 as seed ortholog is 85%.

Group of orthologs #484. Best score 142 bits
Score difference with first non-orthologous sequence - L.braziliensis:142 P.jiroveci:91

A4HEQ4              	100.00%		L0PB10              	100.00%
Bootstrap support for A4HEQ4 as seed ortholog is 100%.
Bootstrap support for L0PB10 as seed ortholog is 98%.

Group of orthologs #485. Best score 142 bits
Score difference with first non-orthologous sequence - L.braziliensis:142 P.jiroveci:142

A4HN47              	100.00%		L0PB81              	100.00%
Bootstrap support for A4HN47 as seed ortholog is 100%.
Bootstrap support for L0PB81 as seed ortholog is 100%.

Group of orthologs #486. Best score 142 bits
Score difference with first non-orthologous sequence - L.braziliensis:142 P.jiroveci:142

A4HQ22              	100.00%		L0PC68              	100.00%
Bootstrap support for A4HQ22 as seed ortholog is 100%.
Bootstrap support for L0PC68 as seed ortholog is 100%.

Group of orthologs #487. Best score 141 bits
Score difference with first non-orthologous sequence - L.braziliensis:141 P.jiroveci:141

A4H5S5              	100.00%		L0P9F7              	100.00%
A4HLL4              	9.25%		L0PGP0              	85.43%
Bootstrap support for A4H5S5 as seed ortholog is 100%.
Bootstrap support for L0P9F7 as seed ortholog is 100%.

Group of orthologs #488. Best score 141 bits
Score difference with first non-orthologous sequence - L.braziliensis:67 P.jiroveci:141

A4HDU0              	100.00%		L0PBN5              	100.00%
                    	       		L0PCE9              	9.72%
                    	       		L0PBP3              	8.23%
Bootstrap support for A4HDU0 as seed ortholog is 85%.
Bootstrap support for L0PBN5 as seed ortholog is 100%.

Group of orthologs #489. Best score 141 bits
Score difference with first non-orthologous sequence - L.braziliensis:141 P.jiroveci:141

A4HDN4              	100.00%		L0P9E5              	100.00%
Bootstrap support for A4HDN4 as seed ortholog is 100%.
Bootstrap support for L0P9E5 as seed ortholog is 100%.

Group of orthologs #490. Best score 141 bits
Score difference with first non-orthologous sequence - L.braziliensis:73 P.jiroveci:96

A4HAC6              	100.00%		L0PD97              	100.00%
Bootstrap support for A4HAC6 as seed ortholog is 98%.
Bootstrap support for L0PD97 as seed ortholog is 99%.

Group of orthologs #491. Best score 141 bits
Score difference with first non-orthologous sequence - L.braziliensis:141 P.jiroveci:141

A4HE05              	100.00%		L0PD65              	100.00%
Bootstrap support for A4HE05 as seed ortholog is 100%.
Bootstrap support for L0PD65 as seed ortholog is 100%.

Group of orthologs #492. Best score 140 bits
Score difference with first non-orthologous sequence - L.braziliensis:140 P.jiroveci:140

A4HD36              	100.00%		L0PD44              	100.00%
Bootstrap support for A4HD36 as seed ortholog is 100%.
Bootstrap support for L0PD44 as seed ortholog is 100%.

Group of orthologs #493. Best score 140 bits
Score difference with first non-orthologous sequence - L.braziliensis:140 P.jiroveci:140

A4HI77              	100.00%		L0PA48              	100.00%
Bootstrap support for A4HI77 as seed ortholog is 100%.
Bootstrap support for L0PA48 as seed ortholog is 100%.

Group of orthologs #494. Best score 140 bits
Score difference with first non-orthologous sequence - L.braziliensis:140 P.jiroveci:140

A4HI23              	100.00%		L0PFU0              	100.00%
Bootstrap support for A4HI23 as seed ortholog is 100%.
Bootstrap support for L0PFU0 as seed ortholog is 100%.

Group of orthologs #495. Best score 140 bits
Score difference with first non-orthologous sequence - L.braziliensis:140 P.jiroveci:140

A4HN82              	100.00%		L0PFG9              	100.00%
Bootstrap support for A4HN82 as seed ortholog is 100%.
Bootstrap support for L0PFG9 as seed ortholog is 100%.

Group of orthologs #496. Best score 139 bits
Score difference with first non-orthologous sequence - L.braziliensis:139 P.jiroveci:139

A4HN72              	100.00%		L0P7L2              	100.00%
                    	       		L0PFZ6              	98.41%
Bootstrap support for A4HN72 as seed ortholog is 100%.
Bootstrap support for L0P7L2 as seed ortholog is 100%.

Group of orthologs #497. Best score 139 bits
Score difference with first non-orthologous sequence - L.braziliensis:139 P.jiroveci:139

A4HK72              	100.00%		L0P701              	100.00%
Bootstrap support for A4HK72 as seed ortholog is 100%.
Bootstrap support for L0P701 as seed ortholog is 100%.

Group of orthologs #498. Best score 139 bits
Score difference with first non-orthologous sequence - L.braziliensis:139 P.jiroveci:139

A4HM63              	100.00%		L0PBI9              	100.00%
Bootstrap support for A4HM63 as seed ortholog is 100%.
Bootstrap support for L0PBI9 as seed ortholog is 100%.

Group of orthologs #499. Best score 139 bits
Score difference with first non-orthologous sequence - L.braziliensis:139 P.jiroveci:139

E9AIT3              	100.00%		L0PFH7              	100.00%
Bootstrap support for E9AIT3 as seed ortholog is 100%.
Bootstrap support for L0PFH7 as seed ortholog is 100%.

Group of orthologs #500. Best score 138 bits
Score difference with first non-orthologous sequence - L.braziliensis:44 P.jiroveci:138

A4HET6              	100.00%		L0PF58              	100.00%
A4HET7              	100.00%		
Bootstrap support for A4HET6 as seed ortholog is 96%.
Bootstrap support for A4HET7 as seed ortholog is 95%.
Bootstrap support for L0PF58 as seed ortholog is 100%.

Group of orthologs #501. Best score 138 bits
Score difference with first non-orthologous sequence - L.braziliensis:138 P.jiroveci:138

A4HAQ0              	100.00%		L0P9M9              	100.00%
Bootstrap support for A4HAQ0 as seed ortholog is 100%.
Bootstrap support for L0P9M9 as seed ortholog is 100%.

Group of orthologs #502. Best score 138 bits
Score difference with first non-orthologous sequence - L.braziliensis:138 P.jiroveci:138

A4H9F3              	100.00%		L0PFH2              	100.00%
Bootstrap support for A4H9F3 as seed ortholog is 100%.
Bootstrap support for L0PFH2 as seed ortholog is 100%.

Group of orthologs #503. Best score 138 bits
Score difference with first non-orthologous sequence - L.braziliensis:138 P.jiroveci:76

A4HBN8              	100.00%		L0PDR6              	100.00%
Bootstrap support for A4HBN8 as seed ortholog is 100%.
Bootstrap support for L0PDR6 as seed ortholog is 77%.

Group of orthologs #504. Best score 138 bits
Score difference with first non-orthologous sequence - L.braziliensis:138 P.jiroveci:138

A4HEU9              	100.00%		L0PDJ4              	100.00%
Bootstrap support for A4HEU9 as seed ortholog is 100%.
Bootstrap support for L0PDJ4 as seed ortholog is 100%.

Group of orthologs #505. Best score 138 bits
Score difference with first non-orthologous sequence - L.braziliensis:138 P.jiroveci:138

A4HPT7              	100.00%		L0PGQ4              	100.00%
Bootstrap support for A4HPT7 as seed ortholog is 100%.
Bootstrap support for L0PGQ4 as seed ortholog is 100%.

Group of orthologs #506. Best score 137 bits
Score difference with first non-orthologous sequence - L.braziliensis:137 P.jiroveci:137

A4H9U0              	100.00%		L0PBJ0              	100.00%
Bootstrap support for A4H9U0 as seed ortholog is 100%.
Bootstrap support for L0PBJ0 as seed ortholog is 100%.

Group of orthologs #507. Best score 137 bits
Score difference with first non-orthologous sequence - L.braziliensis:137 P.jiroveci:137

A4HBS3              	100.00%		L0PBQ1              	100.00%
Bootstrap support for A4HBS3 as seed ortholog is 100%.
Bootstrap support for L0PBQ1 as seed ortholog is 100%.

Group of orthologs #508. Best score 136 bits
Score difference with first non-orthologous sequence - L.braziliensis:136 P.jiroveci:136

A4H4W3              	100.00%		L0PD43              	100.00%
Bootstrap support for A4H4W3 as seed ortholog is 100%.
Bootstrap support for L0PD43 as seed ortholog is 100%.

Group of orthologs #509. Best score 136 bits
Score difference with first non-orthologous sequence - L.braziliensis:136 P.jiroveci:136

A4H8R9              	100.00%		L0PBN7              	100.00%
Bootstrap support for A4H8R9 as seed ortholog is 100%.
Bootstrap support for L0PBN7 as seed ortholog is 100%.

Group of orthologs #510. Best score 136 bits
Score difference with first non-orthologous sequence - L.braziliensis:136 P.jiroveci:136

A4H8I6              	100.00%		L0PFP6              	100.00%
Bootstrap support for A4H8I6 as seed ortholog is 100%.
Bootstrap support for L0PFP6 as seed ortholog is 100%.

Group of orthologs #511. Best score 136 bits
Score difference with first non-orthologous sequence - L.braziliensis:136 P.jiroveci:136

A4HEG5              	100.00%		L0PBX0              	100.00%
Bootstrap support for A4HEG5 as seed ortholog is 100%.
Bootstrap support for L0PBX0 as seed ortholog is 100%.

Group of orthologs #512. Best score 136 bits
Score difference with first non-orthologous sequence - L.braziliensis:136 P.jiroveci:136

A4HGX8              	100.00%		L0PB23              	100.00%
Bootstrap support for A4HGX8 as seed ortholog is 100%.
Bootstrap support for L0PB23 as seed ortholog is 100%.

Group of orthologs #513. Best score 134 bits
Score difference with first non-orthologous sequence - L.braziliensis:134 P.jiroveci:134

A4H8C5              	100.00%		L0PDS0              	100.00%
Bootstrap support for A4H8C5 as seed ortholog is 100%.
Bootstrap support for L0PDS0 as seed ortholog is 100%.

Group of orthologs #514. Best score 134 bits
Score difference with first non-orthologous sequence - L.braziliensis:134 P.jiroveci:134

A4HMH5              	100.00%		L0P896              	100.00%
Bootstrap support for A4HMH5 as seed ortholog is 100%.
Bootstrap support for L0P896 as seed ortholog is 100%.

Group of orthologs #515. Best score 134 bits
Score difference with first non-orthologous sequence - L.braziliensis:134 P.jiroveci:134

A4HI14              	100.00%		L0PCY5              	100.00%
Bootstrap support for A4HI14 as seed ortholog is 100%.
Bootstrap support for L0PCY5 as seed ortholog is 100%.

Group of orthologs #516. Best score 134 bits
Score difference with first non-orthologous sequence - L.braziliensis:134 P.jiroveci:134

A4HL18              	100.00%		L0PET8              	100.00%
Bootstrap support for A4HL18 as seed ortholog is 100%.
Bootstrap support for L0PET8 as seed ortholog is 100%.

Group of orthologs #517. Best score 133 bits
Score difference with first non-orthologous sequence - L.braziliensis:37 P.jiroveci:133

A4H7V3              	100.00%		L0PGL3              	100.00%
Bootstrap support for A4H7V3 as seed ortholog is 79%.
Bootstrap support for L0PGL3 as seed ortholog is 100%.

Group of orthologs #518. Best score 133 bits
Score difference with first non-orthologous sequence - L.braziliensis:133 P.jiroveci:133

A4HGT5              	100.00%		L0P8R5              	100.00%
Bootstrap support for A4HGT5 as seed ortholog is 100%.
Bootstrap support for L0P8R5 as seed ortholog is 100%.

Group of orthologs #519. Best score 133 bits
Score difference with first non-orthologous sequence - L.braziliensis:133 P.jiroveci:133

A4HGE5              	100.00%		L0P9N4              	100.00%
Bootstrap support for A4HGE5 as seed ortholog is 100%.
Bootstrap support for L0P9N4 as seed ortholog is 100%.

Group of orthologs #520. Best score 133 bits
Score difference with first non-orthologous sequence - L.braziliensis:133 P.jiroveci:133

A4HMN3              	100.00%		L0PC80              	100.00%
Bootstrap support for A4HMN3 as seed ortholog is 100%.
Bootstrap support for L0PC80 as seed ortholog is 100%.

Group of orthologs #521. Best score 133 bits
Score difference with first non-orthologous sequence - L.braziliensis:133 P.jiroveci:133

A4HPL1              	100.00%		L0PDN5              	100.00%
Bootstrap support for A4HPL1 as seed ortholog is 100%.
Bootstrap support for L0PDN5 as seed ortholog is 100%.

Group of orthologs #522. Best score 132 bits
Score difference with first non-orthologous sequence - L.braziliensis:132 P.jiroveci:132

A4H7G3              	100.00%		L0PGE7              	100.00%
Bootstrap support for A4H7G3 as seed ortholog is 100%.
Bootstrap support for L0PGE7 as seed ortholog is 100%.

Group of orthologs #523. Best score 131 bits
Score difference with first non-orthologous sequence - L.braziliensis:24 P.jiroveci:47

A4HK77              	100.00%		L0PA17              	100.00%
                    	       		L0PHH9              	13.18%
Bootstrap support for A4HK77 as seed ortholog is 77%.
Bootstrap support for L0PA17 as seed ortholog is 95%.

Group of orthologs #524. Best score 131 bits
Score difference with first non-orthologous sequence - L.braziliensis:131 P.jiroveci:131

A4HNA9              	100.00%		L0PDW9              	100.00%
A4HLQ2              	15.67%		
Bootstrap support for A4HNA9 as seed ortholog is 100%.
Bootstrap support for L0PDW9 as seed ortholog is 100%.

Group of orthologs #525. Best score 131 bits
Score difference with first non-orthologous sequence - L.braziliensis:131 P.jiroveci:131

A4HCW1              	100.00%		L0PAL5              	100.00%
Bootstrap support for A4HCW1 as seed ortholog is 100%.
Bootstrap support for L0PAL5 as seed ortholog is 100%.

Group of orthologs #526. Best score 130 bits
Score difference with first non-orthologous sequence - L.braziliensis:130 P.jiroveci:130

A4HKX7              	100.00%		L0PBC8              	100.00%
A4HE79              	8.66%		
Bootstrap support for A4HKX7 as seed ortholog is 100%.
Bootstrap support for L0PBC8 as seed ortholog is 100%.

Group of orthologs #527. Best score 129 bits
Score difference with first non-orthologous sequence - L.braziliensis:129 P.jiroveci:129

A4H6L6              	100.00%		L0P9M3              	100.00%
Bootstrap support for A4H6L6 as seed ortholog is 100%.
Bootstrap support for L0P9M3 as seed ortholog is 100%.

Group of orthologs #528. Best score 129 bits
Score difference with first non-orthologous sequence - L.braziliensis:129 P.jiroveci:129

A4HIV2              	100.00%		L0PAB8              	100.00%
Bootstrap support for A4HIV2 as seed ortholog is 100%.
Bootstrap support for L0PAB8 as seed ortholog is 100%.

Group of orthologs #529. Best score 128 bits
Score difference with first non-orthologous sequence - L.braziliensis:128 P.jiroveci:128

A4HP03              	100.00%		L0PA86              	100.00%
A4HAJ3              	52.67%		
A4HAJ7              	50.89%		
A4HAJ1              	44.48%		
Bootstrap support for A4HP03 as seed ortholog is 100%.
Bootstrap support for L0PA86 as seed ortholog is 100%.

Group of orthologs #530. Best score 128 bits
Score difference with first non-orthologous sequence - L.braziliensis:128 P.jiroveci:128

A4HEV5              	100.00%		L0PFP1              	100.00%
                    	       		L0PC71              	76.32%
Bootstrap support for A4HEV5 as seed ortholog is 100%.
Bootstrap support for L0PFP1 as seed ortholog is 100%.

Group of orthologs #531. Best score 128 bits
Score difference with first non-orthologous sequence - L.braziliensis:43 P.jiroveci:37

A4H861              	100.00%		L0P9D2              	100.00%
A4HLY8              	100.00%		
Bootstrap support for A4H861 as seed ortholog is 99%.
Bootstrap support for A4HLY8 as seed ortholog is 98%.
Bootstrap support for L0P9D2 as seed ortholog is 96%.

Group of orthologs #532. Best score 126 bits
Score difference with first non-orthologous sequence - L.braziliensis:65 P.jiroveci:64

A4H8E6              	100.00%		L0PC81              	100.00%
A4HDW8              	12.22%		
Bootstrap support for A4H8E6 as seed ortholog is 95%.
Bootstrap support for L0PC81 as seed ortholog is 96%.

Group of orthologs #533. Best score 126 bits
Score difference with first non-orthologous sequence - L.braziliensis:126 P.jiroveci:35

A4HDJ5              	100.00%		L0PAN3              	100.00%
A4H9X2              	6.12%		
Bootstrap support for A4HDJ5 as seed ortholog is 100%.
Bootstrap support for L0PAN3 as seed ortholog is 78%.

Group of orthologs #534. Best score 126 bits
Score difference with first non-orthologous sequence - L.braziliensis:126 P.jiroveci:126

A4H7A3              	100.00%		L0PFY1              	100.00%
Bootstrap support for A4H7A3 as seed ortholog is 100%.
Bootstrap support for L0PFY1 as seed ortholog is 100%.

Group of orthologs #535. Best score 125 bits
Score difference with first non-orthologous sequence - L.braziliensis:125 P.jiroveci:125

A4H8T2              	100.00%		L0PAJ0              	100.00%
Bootstrap support for A4H8T2 as seed ortholog is 100%.
Bootstrap support for L0PAJ0 as seed ortholog is 100%.

Group of orthologs #536. Best score 125 bits
Score difference with first non-orthologous sequence - L.braziliensis:125 P.jiroveci:125

A4HAT4              	100.00%		L0PDQ3              	100.00%
Bootstrap support for A4HAT4 as seed ortholog is 100%.
Bootstrap support for L0PDQ3 as seed ortholog is 100%.

Group of orthologs #537. Best score 125 bits
Score difference with first non-orthologous sequence - L.braziliensis:125 P.jiroveci:125

A4H9C6              	100.00%		L0PFS7              	100.00%
Bootstrap support for A4H9C6 as seed ortholog is 100%.
Bootstrap support for L0PFS7 as seed ortholog is 100%.

Group of orthologs #538. Best score 125 bits
Score difference with first non-orthologous sequence - L.braziliensis:125 P.jiroveci:125

A4HK69              	100.00%		L0PAC1              	100.00%
Bootstrap support for A4HK69 as seed ortholog is 100%.
Bootstrap support for L0PAC1 as seed ortholog is 100%.

Group of orthologs #539. Best score 125 bits
Score difference with first non-orthologous sequence - L.braziliensis:125 P.jiroveci:125

A4HE77              	100.00%		L0PGW6              	100.00%
Bootstrap support for A4HE77 as seed ortholog is 100%.
Bootstrap support for L0PGW6 as seed ortholog is 100%.

Group of orthologs #540. Best score 124 bits
Score difference with first non-orthologous sequence - L.braziliensis:124 P.jiroveci:124

A4H7Z1              	100.00%		L0P9Y2              	100.00%
A4HAJ9              	99.38%		
Bootstrap support for A4H7Z1 as seed ortholog is 100%.
Bootstrap support for L0P9Y2 as seed ortholog is 100%.

Group of orthologs #541. Best score 124 bits
Score difference with first non-orthologous sequence - L.braziliensis:124 P.jiroveci:124

A4HEN8              	100.00%		L0PBH6              	100.00%
A4H3P1              	5.79%		
Bootstrap support for A4HEN8 as seed ortholog is 100%.
Bootstrap support for L0PBH6 as seed ortholog is 100%.

Group of orthologs #542. Best score 124 bits
Score difference with first non-orthologous sequence - L.braziliensis:124 P.jiroveci:124

E9AIL2              	100.00%		L0PF42              	100.00%
                    	       		L0PD01              	98.56%
Bootstrap support for E9AIL2 as seed ortholog is 100%.
Bootstrap support for L0PF42 as seed ortholog is 100%.

Group of orthologs #543. Best score 124 bits
Score difference with first non-orthologous sequence - L.braziliensis:124 P.jiroveci:124

A4H988              	100.00%		L0P9U3              	100.00%
Bootstrap support for A4H988 as seed ortholog is 100%.
Bootstrap support for L0P9U3 as seed ortholog is 100%.

Group of orthologs #544. Best score 124 bits
Score difference with first non-orthologous sequence - L.braziliensis:124 P.jiroveci:124

E9AIT1              	100.00%		L0PAT1              	100.00%
Bootstrap support for E9AIT1 as seed ortholog is 100%.
Bootstrap support for L0PAT1 as seed ortholog is 100%.

Group of orthologs #545. Best score 124 bits
Score difference with first non-orthologous sequence - L.braziliensis:124 P.jiroveci:124

A4HLJ6              	100.00%		L0PG54              	100.00%
Bootstrap support for A4HLJ6 as seed ortholog is 100%.
Bootstrap support for L0PG54 as seed ortholog is 100%.

Group of orthologs #546. Best score 124 bits
Score difference with first non-orthologous sequence - L.braziliensis:75 P.jiroveci:38

A4HL42              	100.00%		L0PGN9              	100.00%
Bootstrap support for A4HL42 as seed ortholog is 98%.
Bootstrap support for L0PGN9 as seed ortholog is 83%.

Group of orthologs #547. Best score 122 bits
Score difference with first non-orthologous sequence - L.braziliensis:122 P.jiroveci:122

A4HJL7              	100.00%		L0PBL5              	100.00%
A4HJL8              	58.20%		
Bootstrap support for A4HJL7 as seed ortholog is 100%.
Bootstrap support for L0PBL5 as seed ortholog is 100%.

Group of orthologs #548. Best score 122 bits
Score difference with first non-orthologous sequence - L.braziliensis:122 P.jiroveci:122

A4H3I1              	100.00%		L0P8B2              	100.00%
Bootstrap support for A4H3I1 as seed ortholog is 100%.
Bootstrap support for L0P8B2 as seed ortholog is 100%.

Group of orthologs #549. Best score 122 bits
Score difference with first non-orthologous sequence - L.braziliensis:122 P.jiroveci:76

A4HLX2              	100.00%		L0P863              	100.00%
Bootstrap support for A4HLX2 as seed ortholog is 100%.
Bootstrap support for L0P863 as seed ortholog is 99%.

Group of orthologs #550. Best score 121 bits
Score difference with first non-orthologous sequence - L.braziliensis:121 P.jiroveci:121

A4H3I2              	100.00%		L0PD11              	100.00%
Bootstrap support for A4H3I2 as seed ortholog is 100%.
Bootstrap support for L0PD11 as seed ortholog is 100%.

Group of orthologs #551. Best score 121 bits
Score difference with first non-orthologous sequence - L.braziliensis:121 P.jiroveci:121

A4H872              	100.00%		L0P9E8              	100.00%
Bootstrap support for A4H872 as seed ortholog is 100%.
Bootstrap support for L0P9E8 as seed ortholog is 100%.

Group of orthologs #552. Best score 121 bits
Score difference with first non-orthologous sequence - L.braziliensis:121 P.jiroveci:121

A4H6P1              	100.00%		L0PE85              	100.00%
Bootstrap support for A4H6P1 as seed ortholog is 100%.
Bootstrap support for L0PE85 as seed ortholog is 100%.

Group of orthologs #553. Best score 121 bits
Score difference with first non-orthologous sequence - L.braziliensis:121 P.jiroveci:121

A4H930              	100.00%		L0PF46              	100.00%
Bootstrap support for A4H930 as seed ortholog is 100%.
Bootstrap support for L0PF46 as seed ortholog is 100%.

Group of orthologs #554. Best score 121 bits
Score difference with first non-orthologous sequence - L.braziliensis:121 P.jiroveci:121

A4HBU3              	100.00%		L0PFE9              	100.00%
Bootstrap support for A4HBU3 as seed ortholog is 100%.
Bootstrap support for L0PFE9 as seed ortholog is 100%.

Group of orthologs #555. Best score 121 bits
Score difference with first non-orthologous sequence - L.braziliensis:121 P.jiroveci:121

A4HN95              	100.00%		L0PA35              	100.00%
Bootstrap support for A4HN95 as seed ortholog is 100%.
Bootstrap support for L0PA35 as seed ortholog is 100%.

Group of orthologs #556. Best score 121 bits
Score difference with first non-orthologous sequence - L.braziliensis:121 P.jiroveci:121

A4HNQ5              	100.00%		L0PDR1              	100.00%
Bootstrap support for A4HNQ5 as seed ortholog is 100%.
Bootstrap support for L0PDR1 as seed ortholog is 100%.

Group of orthologs #557. Best score 121 bits
Score difference with first non-orthologous sequence - L.braziliensis:121 P.jiroveci:121

A4HQK8              	100.00%		L0PCP5              	100.00%
Bootstrap support for A4HQK8 as seed ortholog is 100%.
Bootstrap support for L0PCP5 as seed ortholog is 100%.

Group of orthologs #558. Best score 120 bits
Score difference with first non-orthologous sequence - L.braziliensis:3 P.jiroveci:60

A4HBV1              	100.00%		L0PAY4              	100.00%
A4HBV3              	99.25%		
A4HBV2              	97.01%		
A4HK98              	97.01%		
A4HHI4              	67.16%		
Bootstrap support for A4HBV1 as seed ortholog is 65%.
Alternative seed ortholog is A4H8X1 (3 bits away from this cluster)
Bootstrap support for L0PAY4 as seed ortholog is 99%.

Group of orthologs #559. Best score 119 bits
Score difference with first non-orthologous sequence - L.braziliensis:119 P.jiroveci:119

A4H549              	100.00%		L0PFZ8              	100.00%
Bootstrap support for A4H549 as seed ortholog is 100%.
Bootstrap support for L0PFZ8 as seed ortholog is 100%.

Group of orthologs #560. Best score 119 bits
Score difference with first non-orthologous sequence - L.braziliensis:119 P.jiroveci:119

A4HIU2              	100.00%		L0PA78              	100.00%
Bootstrap support for A4HIU2 as seed ortholog is 100%.
Bootstrap support for L0PA78 as seed ortholog is 100%.

Group of orthologs #561. Best score 119 bits
Score difference with first non-orthologous sequence - L.braziliensis:119 P.jiroveci:119

A4HK53              	100.00%		L0PF74              	100.00%
Bootstrap support for A4HK53 as seed ortholog is 100%.
Bootstrap support for L0PF74 as seed ortholog is 100%.

Group of orthologs #562. Best score 119 bits
Score difference with first non-orthologous sequence - L.braziliensis:119 P.jiroveci:119

A4HLB1              	100.00%		L0PE53              	100.00%
Bootstrap support for A4HLB1 as seed ortholog is 100%.
Bootstrap support for L0PE53 as seed ortholog is 100%.

Group of orthologs #563. Best score 119 bits
Score difference with first non-orthologous sequence - L.braziliensis:119 P.jiroveci:119

A4HNL5              	100.00%		L0PD37              	100.00%
Bootstrap support for A4HNL5 as seed ortholog is 100%.
Bootstrap support for L0PD37 as seed ortholog is 100%.

Group of orthologs #564. Best score 119 bits
Score difference with first non-orthologous sequence - L.braziliensis:119 P.jiroveci:119

E9AIA1              	100.00%		L0PFL0              	100.00%
Bootstrap support for E9AIA1 as seed ortholog is 100%.
Bootstrap support for L0PFL0 as seed ortholog is 100%.

Group of orthologs #565. Best score 118 bits
Score difference with first non-orthologous sequence - L.braziliensis:44 P.jiroveci:118

A4HDU9              	100.00%		L0PDP9              	100.00%
Bootstrap support for A4HDU9 as seed ortholog is 92%.
Bootstrap support for L0PDP9 as seed ortholog is 100%.

Group of orthologs #566. Best score 118 bits
Score difference with first non-orthologous sequence - L.braziliensis:73 P.jiroveci:118

A4HFP5              	100.00%		L0PC61              	100.00%
Bootstrap support for A4HFP5 as seed ortholog is 96%.
Bootstrap support for L0PC61 as seed ortholog is 100%.

Group of orthologs #567. Best score 117 bits
Score difference with first non-orthologous sequence - L.braziliensis:117 P.jiroveci:117

A4HNN0              	100.00%		L0PD68              	100.00%
Bootstrap support for A4HNN0 as seed ortholog is 100%.
Bootstrap support for L0PD68 as seed ortholog is 100%.

Group of orthologs #568. Best score 116 bits
Score difference with first non-orthologous sequence - L.braziliensis:18 P.jiroveci:116

A4HJF9              	100.00%		L0P9S9              	100.00%
A4HJG1              	98.20%		L0PDT3              	44.69%
A4HJF8              	90.06%		
A4HJG3              	90.06%		
A4HJG5              	89.58%		
A4HJ35              	21.78%		
A4HJ37              	21.31%		
A4HJ63              	20.93%		
A4HJ36              	19.22%		
A4HC75              	18.94%		
A4HFT5              	18.84%		
A4H565              	18.75%		
A4HFJ2              	18.75%		
A4HKQ7              	17.90%		
Bootstrap support for A4HJF9 as seed ortholog is 53%.
Alternative seed ortholog is A4HNQ0 (18 bits away from this cluster)
Bootstrap support for L0P9S9 as seed ortholog is 100%.

Group of orthologs #569. Best score 116 bits
Score difference with first non-orthologous sequence - L.braziliensis:45 P.jiroveci:116

A4H410              	100.00%		L0P7E9              	100.00%
Bootstrap support for A4H410 as seed ortholog is 97%.
Bootstrap support for L0P7E9 as seed ortholog is 100%.

Group of orthologs #570. Best score 116 bits
Score difference with first non-orthologous sequence - L.braziliensis:116 P.jiroveci:116

A4HEE9              	100.00%		L0P9S7              	100.00%
Bootstrap support for A4HEE9 as seed ortholog is 100%.
Bootstrap support for L0P9S7 as seed ortholog is 100%.

Group of orthologs #571. Best score 115 bits
Score difference with first non-orthologous sequence - L.braziliensis:19 P.jiroveci:115

A4HDI7              	100.00%		L0PF33              	100.00%
Bootstrap support for A4HDI7 as seed ortholog is 78%.
Bootstrap support for L0PF33 as seed ortholog is 100%.

Group of orthologs #572. Best score 115 bits
Score difference with first non-orthologous sequence - L.braziliensis:115 P.jiroveci:115

A4HPK9              	100.00%		L0P6P2              	100.00%
Bootstrap support for A4HPK9 as seed ortholog is 100%.
Bootstrap support for L0P6P2 as seed ortholog is 100%.

Group of orthologs #573. Best score 114 bits
Score difference with first non-orthologous sequence - L.braziliensis:114 P.jiroveci:114

A4HEU3              	100.00%		L0PGZ5              	100.00%
Bootstrap support for A4HEU3 as seed ortholog is 100%.
Bootstrap support for L0PGZ5 as seed ortholog is 100%.

Group of orthologs #574. Best score 114 bits
Score difference with first non-orthologous sequence - L.braziliensis:114 P.jiroveci:114

A4HIK6              	100.00%		L0PEB8              	100.00%
Bootstrap support for A4HIK6 as seed ortholog is 100%.
Bootstrap support for L0PEB8 as seed ortholog is 100%.

Group of orthologs #575. Best score 114 bits
Score difference with first non-orthologous sequence - L.braziliensis:114 P.jiroveci:114

A4HPY2              	100.00%		L0PG84              	100.00%
Bootstrap support for A4HPY2 as seed ortholog is 100%.
Bootstrap support for L0PG84 as seed ortholog is 100%.

Group of orthologs #576. Best score 113 bits
Score difference with first non-orthologous sequence - L.braziliensis:113 P.jiroveci:113

A4HLC1              	100.00%		L0PEI9              	100.00%
A4HGG2              	55.28%		
A4HCM7              	32.11%		
Bootstrap support for A4HLC1 as seed ortholog is 100%.
Bootstrap support for L0PEI9 as seed ortholog is 100%.

Group of orthologs #577. Best score 113 bits
Score difference with first non-orthologous sequence - L.braziliensis:113 P.jiroveci:113

A4H3R3              	100.00%		L0P8H6              	100.00%
A4HAZ5              	100.00%		
Bootstrap support for A4H3R3 as seed ortholog is 100%.
Bootstrap support for A4HAZ5 as seed ortholog is 100%.
Bootstrap support for L0P8H6 as seed ortholog is 100%.

Group of orthologs #578. Best score 113 bits
Score difference with first non-orthologous sequence - L.braziliensis:113 P.jiroveci:113

A4HKR2              	100.00%		L0PDH1              	100.00%
A4HKR0              	36.60%		
Bootstrap support for A4HKR2 as seed ortholog is 100%.
Bootstrap support for L0PDH1 as seed ortholog is 100%.

Group of orthologs #579. Best score 113 bits
Score difference with first non-orthologous sequence - L.braziliensis:33 P.jiroveci:113

A4HN07              	100.00%		L0PHT7              	100.00%
A4HK31              	6.86%		
Bootstrap support for A4HN07 as seed ortholog is 70%.
Alternative seed ortholog is A4H5T1 (33 bits away from this cluster)
Bootstrap support for L0PHT7 as seed ortholog is 100%.

Group of orthologs #580. Best score 113 bits
Score difference with first non-orthologous sequence - L.braziliensis:113 P.jiroveci:113

A4H472              	100.00%		L0PE76              	100.00%
Bootstrap support for A4H472 as seed ortholog is 100%.
Bootstrap support for L0PE76 as seed ortholog is 100%.

Group of orthologs #581. Best score 113 bits
Score difference with first non-orthologous sequence - L.braziliensis:64 P.jiroveci:113

A4HAK2              	100.00%		L0PAZ1              	100.00%
Bootstrap support for A4HAK2 as seed ortholog is 99%.
Bootstrap support for L0PAZ1 as seed ortholog is 100%.

Group of orthologs #582. Best score 113 bits
Score difference with first non-orthologous sequence - L.braziliensis:113 P.jiroveci:113

A4H999              	100.00%		L0PHC9              	100.00%
Bootstrap support for A4H999 as seed ortholog is 100%.
Bootstrap support for L0PHC9 as seed ortholog is 100%.

Group of orthologs #583. Best score 113 bits
Score difference with first non-orthologous sequence - L.braziliensis:113 P.jiroveci:113

A4HP28              	100.00%		L0PDI3              	100.00%
Bootstrap support for A4HP28 as seed ortholog is 100%.
Bootstrap support for L0PDI3 as seed ortholog is 100%.

Group of orthologs #584. Best score 112 bits
Score difference with first non-orthologous sequence - L.braziliensis:112 P.jiroveci:112

A4HCL6              	100.00%		L0PBH8              	100.00%
Bootstrap support for A4HCL6 as seed ortholog is 100%.
Bootstrap support for L0PBH8 as seed ortholog is 100%.

Group of orthologs #585. Best score 112 bits
Score difference with first non-orthologous sequence - L.braziliensis:25 P.jiroveci:112

A4HP95              	100.00%		L0PAN5              	100.00%
Bootstrap support for A4HP95 as seed ortholog is 78%.
Bootstrap support for L0PAN5 as seed ortholog is 100%.

Group of orthologs #586. Best score 111 bits
Score difference with first non-orthologous sequence - L.braziliensis:44 P.jiroveci:111

A4H8R8              	100.00%		L0PBT0              	100.00%
Bootstrap support for A4H8R8 as seed ortholog is 94%.
Bootstrap support for L0PBT0 as seed ortholog is 100%.

Group of orthologs #587. Best score 111 bits
Score difference with first non-orthologous sequence - L.braziliensis:111 P.jiroveci:111

A4HDR7              	100.00%		L0PG87              	100.00%
Bootstrap support for A4HDR7 as seed ortholog is 100%.
Bootstrap support for L0PG87 as seed ortholog is 100%.

Group of orthologs #588. Best score 111 bits
Score difference with first non-orthologous sequence - L.braziliensis:111 P.jiroveci:111

A4HPW4              	100.00%		L0PEV3              	100.00%
Bootstrap support for A4HPW4 as seed ortholog is 100%.
Bootstrap support for L0PEV3 as seed ortholog is 100%.

Group of orthologs #589. Best score 110 bits
Score difference with first non-orthologous sequence - L.braziliensis:110 P.jiroveci:16

A4HLR0              	100.00%		L0PCW4              	100.00%
A4HJW2              	31.16%		
A4HJT5              	20.65%		
A4HP12              	19.77%		
A4HP13              	14.64%		
A4HCE6              	12.27%		
A4HKG9              	12.02%		
A4HHQ5              	10.76%		
Bootstrap support for A4HLR0 as seed ortholog is 100%.
Bootstrap support for L0PCW4 as seed ortholog is 67%.
Alternative seed ortholog is L0PCN5 (16 bits away from this cluster)

Group of orthologs #590. Best score 110 bits
Score difference with first non-orthologous sequence - L.braziliensis:29 P.jiroveci:110

A4HNZ6              	100.00%		L0PCT4              	100.00%
A4H662              	14.41%		
Bootstrap support for A4HNZ6 as seed ortholog is 74%.
Alternative seed ortholog is A4H7J2 (29 bits away from this cluster)
Bootstrap support for L0PCT4 as seed ortholog is 100%.

Group of orthologs #591. Best score 110 bits
Score difference with first non-orthologous sequence - L.braziliensis:110 P.jiroveci:110

A4HB46              	100.00%		L0PDJ2              	100.00%
Bootstrap support for A4HB46 as seed ortholog is 100%.
Bootstrap support for L0PDJ2 as seed ortholog is 100%.

Group of orthologs #592. Best score 110 bits
Score difference with first non-orthologous sequence - L.braziliensis:110 P.jiroveci:110

A4HGU7              	100.00%		L0PBD5              	100.00%
Bootstrap support for A4HGU7 as seed ortholog is 100%.
Bootstrap support for L0PBD5 as seed ortholog is 100%.

Group of orthologs #593. Best score 110 bits
Score difference with first non-orthologous sequence - L.braziliensis:110 P.jiroveci:110

A4HKA7              	100.00%		L0P9F5              	100.00%
Bootstrap support for A4HKA7 as seed ortholog is 100%.
Bootstrap support for L0P9F5 as seed ortholog is 100%.

Group of orthologs #594. Best score 110 bits
Score difference with first non-orthologous sequence - L.braziliensis:110 P.jiroveci:110

A4HP35              	100.00%		L0P7U6              	100.00%
Bootstrap support for A4HP35 as seed ortholog is 100%.
Bootstrap support for L0P7U6 as seed ortholog is 100%.

Group of orthologs #595. Best score 109 bits
Score difference with first non-orthologous sequence - L.braziliensis:109 P.jiroveci:109

A4H3I0              	100.00%		L0PGQ8              	100.00%
Bootstrap support for A4H3I0 as seed ortholog is 100%.
Bootstrap support for L0PGQ8 as seed ortholog is 100%.

Group of orthologs #596. Best score 109 bits
Score difference with first non-orthologous sequence - L.braziliensis:109 P.jiroveci:109

A4HPV6              	100.00%		L0PCT5              	100.00%
Bootstrap support for A4HPV6 as seed ortholog is 100%.
Bootstrap support for L0PCT5 as seed ortholog is 100%.

Group of orthologs #597. Best score 108 bits
Score difference with first non-orthologous sequence - L.braziliensis:108 P.jiroveci:108

A4H3W0              	100.00%		L0PB62              	100.00%
Bootstrap support for A4H3W0 as seed ortholog is 100%.
Bootstrap support for L0PB62 as seed ortholog is 100%.

Group of orthologs #598. Best score 107 bits
Score difference with first non-orthologous sequence - L.braziliensis:107 P.jiroveci:107

A4HPA8              	100.00%		L0P7X9              	100.00%
                    	       		L0PBE2              	100.00%
Bootstrap support for A4HPA8 as seed ortholog is 100%.
Bootstrap support for L0P7X9 as seed ortholog is 100%.
Bootstrap support for L0PBE2 as seed ortholog is 100%.

Group of orthologs #599. Best score 107 bits
Score difference with first non-orthologous sequence - L.braziliensis:107 P.jiroveci:107

A4H7F2              	100.00%		L0PAZ5              	100.00%
Bootstrap support for A4H7F2 as seed ortholog is 100%.
Bootstrap support for L0PAZ5 as seed ortholog is 100%.

Group of orthologs #600. Best score 106 bits
Score difference with first non-orthologous sequence - L.braziliensis:106 P.jiroveci:106

A4HM91              	100.00%		L0P997              	100.00%
Bootstrap support for A4HM91 as seed ortholog is 100%.
Bootstrap support for L0P997 as seed ortholog is 100%.

Group of orthologs #601. Best score 105 bits
Score difference with first non-orthologous sequence - L.braziliensis:57 P.jiroveci:105

A4H5P7              	100.00%		L0PF35              	100.00%
Bootstrap support for A4H5P7 as seed ortholog is 95%.
Bootstrap support for L0PF35 as seed ortholog is 100%.

Group of orthologs #602. Best score 105 bits
Score difference with first non-orthologous sequence - L.braziliensis:105 P.jiroveci:105

A4HI05              	100.00%		L0PC70              	100.00%
Bootstrap support for A4HI05 as seed ortholog is 100%.
Bootstrap support for L0PC70 as seed ortholog is 100%.

Group of orthologs #603. Best score 105 bits
Score difference with first non-orthologous sequence - L.braziliensis:105 P.jiroveci:105

A4HJM3              	100.00%		L0PCY2              	100.00%
Bootstrap support for A4HJM3 as seed ortholog is 100%.
Bootstrap support for L0PCY2 as seed ortholog is 100%.

Group of orthologs #604. Best score 105 bits
Score difference with first non-orthologous sequence - L.braziliensis:105 P.jiroveci:105

E9AI55              	100.00%		L0PE81              	100.00%
Bootstrap support for E9AI55 as seed ortholog is 100%.
Bootstrap support for L0PE81 as seed ortholog is 100%.

Group of orthologs #605. Best score 104 bits
Score difference with first non-orthologous sequence - L.braziliensis:104 P.jiroveci:57

A4HCN9              	100.00%		L0P9D5              	100.00%
Bootstrap support for A4HCN9 as seed ortholog is 100%.
Bootstrap support for L0P9D5 as seed ortholog is 96%.

Group of orthologs #606. Best score 104 bits
Score difference with first non-orthologous sequence - L.braziliensis:43 P.jiroveci:104

A4HBJ7              	100.00%		L0PF38              	100.00%
Bootstrap support for A4HBJ7 as seed ortholog is 93%.
Bootstrap support for L0PF38 as seed ortholog is 100%.

Group of orthologs #607. Best score 103 bits
Score difference with first non-orthologous sequence - L.braziliensis:103 P.jiroveci:103

A4HJV0              	100.00%		L0PAE6              	100.00%
A4HJU9              	95.74%		
A4HJV1              	48.49%		
A4HGP7              	25.96%		
A4HM27              	10.16%		
Bootstrap support for A4HJV0 as seed ortholog is 100%.
Bootstrap support for L0PAE6 as seed ortholog is 100%.

Group of orthologs #608. Best score 103 bits
Score difference with first non-orthologous sequence - L.braziliensis:103 P.jiroveci:103

A4HAK5              	100.00%		L0PBH0              	100.00%
A4HAK3              	96.48%		L0PGS5              	47.91%
A4HAK6              	96.48%		
Bootstrap support for A4HAK5 as seed ortholog is 100%.
Bootstrap support for L0PBH0 as seed ortholog is 100%.

Group of orthologs #609. Best score 103 bits
Score difference with first non-orthologous sequence - L.braziliensis:103 P.jiroveci:59

A4HPG8              	100.00%		L0P9T6              	100.00%
Bootstrap support for A4HPG8 as seed ortholog is 100%.
Bootstrap support for L0P9T6 as seed ortholog is 98%.

Group of orthologs #610. Best score 103 bits
Score difference with first non-orthologous sequence - L.braziliensis:103 P.jiroveci:103

A4HPF3              	100.00%		L0PEG0              	100.00%
Bootstrap support for A4HPF3 as seed ortholog is 100%.
Bootstrap support for L0PEG0 as seed ortholog is 100%.

Group of orthologs #611. Best score 103 bits
Score difference with first non-orthologous sequence - L.braziliensis:9 P.jiroveci:103

E9AIL7              	100.00%		L0PDL5              	100.00%
Bootstrap support for E9AIL7 as seed ortholog is 59%.
Alternative seed ortholog is A4HKT1 (9 bits away from this cluster)
Bootstrap support for L0PDL5 as seed ortholog is 100%.

Group of orthologs #612. Best score 102 bits
Score difference with first non-orthologous sequence - L.braziliensis:11 P.jiroveci:102

A4HG14              	100.00%		L0PGV5              	100.00%
A4HCV9              	48.08%		
A4HCW0              	42.43%		
Bootstrap support for A4HG14 as seed ortholog is 57%.
Alternative seed ortholog is A4H3V1 (11 bits away from this cluster)
Bootstrap support for L0PGV5 as seed ortholog is 100%.

Group of orthologs #613. Best score 102 bits
Score difference with first non-orthologous sequence - L.braziliensis:102 P.jiroveci:102

A4HAS9              	100.00%		L0PA36              	100.00%
Bootstrap support for A4HAS9 as seed ortholog is 100%.
Bootstrap support for L0PA36 as seed ortholog is 100%.

Group of orthologs #614. Best score 101 bits
Score difference with first non-orthologous sequence - L.braziliensis:101 P.jiroveci:101

A4H4W4              	100.00%		L0PFY6              	100.00%
Bootstrap support for A4H4W4 as seed ortholog is 100%.
Bootstrap support for L0PFY6 as seed ortholog is 100%.

Group of orthologs #615. Best score 101 bits
Score difference with first non-orthologous sequence - L.braziliensis:101 P.jiroveci:101

A4HD14              	100.00%		L0PD02              	100.00%
Bootstrap support for A4HD14 as seed ortholog is 100%.
Bootstrap support for L0PD02 as seed ortholog is 100%.

Group of orthologs #616. Best score 100 bits
Score difference with first non-orthologous sequence - L.braziliensis:39 P.jiroveci:100

A4HL72              	100.00%		L0PCJ5              	100.00%
                    	       		L0P6T2              	12.00%
Bootstrap support for A4HL72 as seed ortholog is 70%.
Alternative seed ortholog is A4HP71 (39 bits away from this cluster)
Bootstrap support for L0PCJ5 as seed ortholog is 100%.

Group of orthologs #617. Best score 99 bits
Score difference with first non-orthologous sequence - L.braziliensis:99 P.jiroveci:45

A4HMS6              	100.00%		L0P948              	100.00%
Bootstrap support for A4HMS6 as seed ortholog is 100%.
Bootstrap support for L0P948 as seed ortholog is 96%.

Group of orthologs #618. Best score 99 bits
Score difference with first non-orthologous sequence - L.braziliensis:99 P.jiroveci:99

A4HPH6              	100.00%		L0PCG3              	100.00%
Bootstrap support for A4HPH6 as seed ortholog is 100%.
Bootstrap support for L0PCG3 as seed ortholog is 100%.

Group of orthologs #619. Best score 98 bits
Score difference with first non-orthologous sequence - L.braziliensis:98 P.jiroveci:98

A4HDJ0              	100.00%		L0P9X0              	100.00%
Bootstrap support for A4HDJ0 as seed ortholog is 100%.
Bootstrap support for L0P9X0 as seed ortholog is 100%.

Group of orthologs #620. Best score 97 bits
Score difference with first non-orthologous sequence - L.braziliensis:97 P.jiroveci:97

A4H5W2              	100.00%		L0PBR7              	100.00%
A4H9W0              	100.00%		L0PC11              	100.00%
A4H9W2              	100.00%		
A4H9W1              	100.00%		
Bootstrap support for A4H5W2 as seed ortholog is 100%.
Bootstrap support for A4H9W0 as seed ortholog is 100%.
Bootstrap support for A4H9W2 as seed ortholog is 100%.
Bootstrap support for A4H9W1 as seed ortholog is 100%.
Bootstrap support for L0PBR7 as seed ortholog is 100%.
Bootstrap support for L0PC11 as seed ortholog is 100%.

Group of orthologs #621. Best score 97 bits
Score difference with first non-orthologous sequence - L.braziliensis:97 P.jiroveci:97

A4HQH0              	100.00%		L0P9K2              	100.00%
A4HQI1              	41.62%		
Bootstrap support for A4HQH0 as seed ortholog is 100%.
Bootstrap support for L0P9K2 as seed ortholog is 100%.

Group of orthologs #622. Best score 97 bits
Score difference with first non-orthologous sequence - L.braziliensis:97 P.jiroveci:97

A4H3Y9              	100.00%		L0PAA1              	100.00%
Bootstrap support for A4H3Y9 as seed ortholog is 100%.
Bootstrap support for L0PAA1 as seed ortholog is 100%.

Group of orthologs #623. Best score 97 bits
Score difference with first non-orthologous sequence - L.braziliensis:97 P.jiroveci:97

A4H6T7              	100.00%		L0P838              	100.00%
Bootstrap support for A4H6T7 as seed ortholog is 100%.
Bootstrap support for L0P838 as seed ortholog is 100%.

Group of orthologs #624. Best score 97 bits
Score difference with first non-orthologous sequence - L.braziliensis:97 P.jiroveci:97

A4HIP1              	100.00%		L0PE03              	100.00%
Bootstrap support for A4HIP1 as seed ortholog is 100%.
Bootstrap support for L0PE03 as seed ortholog is 100%.

Group of orthologs #625. Best score 97 bits
Score difference with first non-orthologous sequence - L.braziliensis:97 P.jiroveci:97

A4HPB6              	100.00%		L0PBC7              	100.00%
Bootstrap support for A4HPB6 as seed ortholog is 100%.
Bootstrap support for L0PBC7 as seed ortholog is 100%.

Group of orthologs #626. Best score 97 bits
Score difference with first non-orthologous sequence - L.braziliensis:97 P.jiroveci:97

A4HNS4              	100.00%		L0PCU6              	100.00%
Bootstrap support for A4HNS4 as seed ortholog is 100%.
Bootstrap support for L0PCU6 as seed ortholog is 100%.

Group of orthologs #627. Best score 96 bits
Score difference with first non-orthologous sequence - L.braziliensis:96 P.jiroveci:96

A4H4M3              	100.00%		L0PE13              	100.00%
A4H4M4              	100.00%		
Bootstrap support for A4H4M3 as seed ortholog is 100%.
Bootstrap support for A4H4M4 as seed ortholog is 100%.
Bootstrap support for L0PE13 as seed ortholog is 100%.

Group of orthologs #628. Best score 96 bits
Score difference with first non-orthologous sequence - L.braziliensis:96 P.jiroveci:96

E9AIS7              	100.00%		L0PG04              	100.00%
Bootstrap support for E9AIS7 as seed ortholog is 100%.
Bootstrap support for L0PG04 as seed ortholog is 100%.

Group of orthologs #629. Best score 94 bits
Score difference with first non-orthologous sequence - L.braziliensis:94 P.jiroveci:94

A4HCH9              	100.00%		L0PEV4              	100.00%
Bootstrap support for A4HCH9 as seed ortholog is 100%.
Bootstrap support for L0PEV4 as seed ortholog is 100%.

Group of orthologs #630. Best score 94 bits
Score difference with first non-orthologous sequence - L.braziliensis:94 P.jiroveci:94

A4HEN7              	100.00%		L0PDX6              	100.00%
Bootstrap support for A4HEN7 as seed ortholog is 100%.
Bootstrap support for L0PDX6 as seed ortholog is 100%.

Group of orthologs #631. Best score 94 bits
Score difference with first non-orthologous sequence - L.braziliensis:8 P.jiroveci:94

A4HKZ2              	100.00%		L0PBE3              	100.00%
Bootstrap support for A4HKZ2 as seed ortholog is 56%.
Alternative seed ortholog is A4HFC4 (8 bits away from this cluster)
Bootstrap support for L0PBE3 as seed ortholog is 100%.

Group of orthologs #632. Best score 94 bits
Score difference with first non-orthologous sequence - L.braziliensis:48 P.jiroveci:94

A4HH40              	100.00%		L0PHJ3              	100.00%
Bootstrap support for A4HH40 as seed ortholog is 97%.
Bootstrap support for L0PHJ3 as seed ortholog is 100%.

Group of orthologs #633. Best score 93 bits
Score difference with first non-orthologous sequence - L.braziliensis:5 P.jiroveci:50

A4HK93              	100.00%		L0PFZ5              	100.00%
A4HK94              	23.63%		
Bootstrap support for A4HK93 as seed ortholog is 48%.
Alternative seed ortholog is A4H7Y2 (5 bits away from this cluster)
Bootstrap support for L0PFZ5 as seed ortholog is 94%.

Group of orthologs #634. Best score 93 bits
Score difference with first non-orthologous sequence - L.braziliensis:93 P.jiroveci:93

A4HCJ7              	100.00%		L0PEH9              	100.00%
Bootstrap support for A4HCJ7 as seed ortholog is 100%.
Bootstrap support for L0PEH9 as seed ortholog is 100%.

Group of orthologs #635. Best score 92 bits
Score difference with first non-orthologous sequence - L.braziliensis:92 P.jiroveci:92

A4H599              	100.00%		L0PD77              	100.00%
A4HKQ4              	20.88%		
Bootstrap support for A4H599 as seed ortholog is 100%.
Bootstrap support for L0PD77 as seed ortholog is 100%.

Group of orthologs #636. Best score 92 bits
Score difference with first non-orthologous sequence - L.braziliensis:92 P.jiroveci:92

A4HFE7              	100.00%		L0PAS9              	100.00%
Bootstrap support for A4HFE7 as seed ortholog is 100%.
Bootstrap support for L0PAS9 as seed ortholog is 100%.

Group of orthologs #637. Best score 92 bits
Score difference with first non-orthologous sequence - L.braziliensis:10 P.jiroveci:92

A4HEW1              	100.00%		L0PD86              	100.00%
Bootstrap support for A4HEW1 as seed ortholog is 69%.
Alternative seed ortholog is A4HJN3 (10 bits away from this cluster)
Bootstrap support for L0PD86 as seed ortholog is 100%.

Group of orthologs #638. Best score 92 bits
Score difference with first non-orthologous sequence - L.braziliensis:92 P.jiroveci:92

A4HKJ9              	100.00%		L0PAB2              	100.00%
Bootstrap support for A4HKJ9 as seed ortholog is 100%.
Bootstrap support for L0PAB2 as seed ortholog is 100%.

Group of orthologs #639. Best score 92 bits
Score difference with first non-orthologous sequence - L.braziliensis:92 P.jiroveci:92

A4HNP4              	100.00%		L0PA27              	100.00%
Bootstrap support for A4HNP4 as seed ortholog is 100%.
Bootstrap support for L0PA27 as seed ortholog is 100%.

Group of orthologs #640. Best score 91 bits
Score difference with first non-orthologous sequence - L.braziliensis:91 P.jiroveci:91

A4HA68              	100.00%		L0P9U1              	100.00%
Bootstrap support for A4HA68 as seed ortholog is 100%.
Bootstrap support for L0P9U1 as seed ortholog is 100%.

Group of orthologs #641. Best score 91 bits
Score difference with first non-orthologous sequence - L.braziliensis:18 P.jiroveci:91

A4H9X0              	100.00%		L0PDE4              	100.00%
Bootstrap support for A4H9X0 as seed ortholog is 72%.
Alternative seed ortholog is A4HLP0 (18 bits away from this cluster)
Bootstrap support for L0PDE4 as seed ortholog is 100%.

Group of orthologs #642. Best score 91 bits
Score difference with first non-orthologous sequence - L.braziliensis:91 P.jiroveci:91

A4HAZ6              	100.00%		L0PEL6              	100.00%
Bootstrap support for A4HAZ6 as seed ortholog is 100%.
Bootstrap support for L0PEL6 as seed ortholog is 100%.

Group of orthologs #643. Best score 91 bits
Score difference with first non-orthologous sequence - L.braziliensis:31 P.jiroveci:91

A4HNB7              	100.00%		L0PA97              	100.00%
Bootstrap support for A4HNB7 as seed ortholog is 93%.
Bootstrap support for L0PA97 as seed ortholog is 100%.

Group of orthologs #644. Best score 91 bits
Score difference with first non-orthologous sequence - L.braziliensis:91 P.jiroveci:91

A4HM47              	100.00%		L0PH96              	100.00%
Bootstrap support for A4HM47 as seed ortholog is 100%.
Bootstrap support for L0PH96 as seed ortholog is 100%.

Group of orthologs #645. Best score 90 bits
Score difference with first non-orthologous sequence - L.braziliensis:90 P.jiroveci:90

A4H6W1              	100.00%		L0P939              	100.00%
                    	       		L0PFG4              	89.47%
Bootstrap support for A4H6W1 as seed ortholog is 100%.
Bootstrap support for L0P939 as seed ortholog is 100%.

Group of orthologs #646. Best score 89 bits
Score difference with first non-orthologous sequence - L.braziliensis:89 P.jiroveci:89

O15827              	100.00%		L0PCN2              	100.00%
Bootstrap support for O15827 as seed ortholog is 100%.
Bootstrap support for L0PCN2 as seed ortholog is 100%.

Group of orthologs #647. Best score 88 bits
Score difference with first non-orthologous sequence - L.braziliensis:46 P.jiroveci:88

A4HKH1              	100.00%		L0PBW9              	100.00%
A4HKH0              	86.03%		
Bootstrap support for A4HKH1 as seed ortholog is 89%.
Bootstrap support for L0PBW9 as seed ortholog is 100%.

Group of orthologs #648. Best score 88 bits
Score difference with first non-orthologous sequence - L.braziliensis:88 P.jiroveci:88

A4HL28              	100.00%		L0PF75              	100.00%
A4HJR2              	6.59%		
Bootstrap support for A4HL28 as seed ortholog is 100%.
Bootstrap support for L0PF75 as seed ortholog is 100%.

Group of orthologs #649. Best score 88 bits
Score difference with first non-orthologous sequence - L.braziliensis:88 P.jiroveci:88

A4H326              	100.00%		L0PFV4              	100.00%
Bootstrap support for A4H326 as seed ortholog is 100%.
Bootstrap support for L0PFV4 as seed ortholog is 100%.

Group of orthologs #650. Best score 88 bits
Score difference with first non-orthologous sequence - L.braziliensis:88 P.jiroveci:20

A4HBM2              	100.00%		L0PAM8              	100.00%
Bootstrap support for A4HBM2 as seed ortholog is 100%.
Bootstrap support for L0PAM8 as seed ortholog is 71%.
Alternative seed ortholog is L0P8B4 (20 bits away from this cluster)

Group of orthologs #651. Best score 88 bits
Score difference with first non-orthologous sequence - L.braziliensis:88 P.jiroveci:88

A4HQC1              	100.00%		L0P8D5              	100.00%
Bootstrap support for A4HQC1 as seed ortholog is 100%.
Bootstrap support for L0P8D5 as seed ortholog is 100%.

Group of orthologs #652. Best score 87 bits
Score difference with first non-orthologous sequence - L.braziliensis:47 P.jiroveci:87

A4H3C2              	100.00%		L0PDL7              	100.00%
Bootstrap support for A4H3C2 as seed ortholog is 99%.
Bootstrap support for L0PDL7 as seed ortholog is 100%.

Group of orthologs #653. Best score 87 bits
Score difference with first non-orthologous sequence - L.braziliensis:87 P.jiroveci:87

A4H8J0              	100.00%		L0PBX9              	100.00%
Bootstrap support for A4H8J0 as seed ortholog is 100%.
Bootstrap support for L0PBX9 as seed ortholog is 100%.

Group of orthologs #654. Best score 87 bits
Score difference with first non-orthologous sequence - L.braziliensis:5 P.jiroveci:87

A4HE74              	100.00%		L0PBK0              	100.00%
Bootstrap support for A4HE74 as seed ortholog is 62%.
Alternative seed ortholog is A4H798 (5 bits away from this cluster)
Bootstrap support for L0PBK0 as seed ortholog is 100%.

Group of orthologs #655. Best score 87 bits
Score difference with first non-orthologous sequence - L.braziliensis:37 P.jiroveci:24

A4HHT5              	100.00%		L0PAF0              	100.00%
Bootstrap support for A4HHT5 as seed ortholog is 81%.
Bootstrap support for L0PAF0 as seed ortholog is 75%.

Group of orthologs #656. Best score 87 bits
Score difference with first non-orthologous sequence - L.braziliensis:87 P.jiroveci:87

A4HIN8              	100.00%		L0PCV8              	100.00%
Bootstrap support for A4HIN8 as seed ortholog is 100%.
Bootstrap support for L0PCV8 as seed ortholog is 100%.

Group of orthologs #657. Best score 87 bits
Score difference with first non-orthologous sequence - L.braziliensis:87 P.jiroveci:87

A4HL16              	100.00%		L0PDD4              	100.00%
Bootstrap support for A4HL16 as seed ortholog is 100%.
Bootstrap support for L0PDD4 as seed ortholog is 100%.

Group of orthologs #658. Best score 86 bits
Score difference with first non-orthologous sequence - L.braziliensis:86 P.jiroveci:86

A4H4Q4              	100.00%		L0P7A1              	100.00%
Bootstrap support for A4H4Q4 as seed ortholog is 100%.
Bootstrap support for L0P7A1 as seed ortholog is 100%.

Group of orthologs #659. Best score 86 bits
Score difference with first non-orthologous sequence - L.braziliensis:27 P.jiroveci:19

A4HDW6              	100.00%		L0PFG2              	100.00%
Bootstrap support for A4HDW6 as seed ortholog is 80%.
Bootstrap support for L0PFG2 as seed ortholog is 74%.
Alternative seed ortholog is L0P6Y8 (19 bits away from this cluster)

Group of orthologs #660. Best score 85 bits
Score difference with first non-orthologous sequence - L.braziliensis:85 P.jiroveci:85

A4HER7              	100.00%		L0PD91              	100.00%
A4HER9              	100.00%		
Bootstrap support for A4HER7 as seed ortholog is 100%.
Bootstrap support for A4HER9 as seed ortholog is 100%.
Bootstrap support for L0PD91 as seed ortholog is 100%.

Group of orthologs #661. Best score 85 bits
Score difference with first non-orthologous sequence - L.braziliensis:85 P.jiroveci:85

A4HLB2              	100.00%		L0P7G9              	100.00%
A4H873              	97.62%		
Bootstrap support for A4HLB2 as seed ortholog is 100%.
Bootstrap support for L0P7G9 as seed ortholog is 100%.

Group of orthologs #662. Best score 85 bits
Score difference with first non-orthologous sequence - L.braziliensis:85 P.jiroveci:85

A4HNN1              	100.00%		L0PBU9              	100.00%
A4HCI1              	5.73%		
Bootstrap support for A4HNN1 as seed ortholog is 100%.
Bootstrap support for L0PBU9 as seed ortholog is 100%.

Group of orthologs #663. Best score 85 bits
Score difference with first non-orthologous sequence - L.braziliensis:85 P.jiroveci:85

A4HI25              	100.00%		L0P8K4              	100.00%
Bootstrap support for A4HI25 as seed ortholog is 100%.
Bootstrap support for L0P8K4 as seed ortholog is 100%.

Group of orthologs #664. Best score 85 bits
Score difference with first non-orthologous sequence - L.braziliensis:85 P.jiroveci:2

A4HDS0              	100.00%		L0PDW2              	100.00%
Bootstrap support for A4HDS0 as seed ortholog is 100%.
Bootstrap support for L0PDW2 as seed ortholog is 54%.
Alternative seed ortholog is L0PEF8 (2 bits away from this cluster)

Group of orthologs #665. Best score 85 bits
Score difference with first non-orthologous sequence - L.braziliensis:43 P.jiroveci:35

A4HIZ5              	100.00%		L0PDB2              	100.00%
Bootstrap support for A4HIZ5 as seed ortholog is 84%.
Bootstrap support for L0PDB2 as seed ortholog is 78%.

Group of orthologs #666. Best score 85 bits
Score difference with first non-orthologous sequence - L.braziliensis:85 P.jiroveci:85

A4HQH7              	100.00%		L0PDN1              	100.00%
Bootstrap support for A4HQH7 as seed ortholog is 100%.
Bootstrap support for L0PDN1 as seed ortholog is 100%.

Group of orthologs #667. Best score 84 bits
Score difference with first non-orthologous sequence - L.braziliensis:84 P.jiroveci:84

A4H357              	100.00%		L0PHK8              	100.00%
                    	       		L0P8I1              	11.75%
Bootstrap support for A4H357 as seed ortholog is 100%.
Bootstrap support for L0PHK8 as seed ortholog is 100%.

Group of orthologs #668. Best score 84 bits
Score difference with first non-orthologous sequence - L.braziliensis:84 P.jiroveci:84

A4HG68              	100.00%		L0P7T6              	100.00%
                    	       		L0PF25              	100.00%
Bootstrap support for A4HG68 as seed ortholog is 100%.
Bootstrap support for L0P7T6 as seed ortholog is 100%.
Bootstrap support for L0PF25 as seed ortholog is 100%.

Group of orthologs #669. Best score 84 bits
Score difference with first non-orthologous sequence - L.braziliensis:84 P.jiroveci:84

A4HPJ4              	100.00%		L0PCZ2              	100.00%
A4HPV9              	100.00%		
Bootstrap support for A4HPJ4 as seed ortholog is 100%.
Bootstrap support for A4HPV9 as seed ortholog is 100%.
Bootstrap support for L0PCZ2 as seed ortholog is 100%.

Group of orthologs #670. Best score 84 bits
Score difference with first non-orthologous sequence - L.braziliensis:84 P.jiroveci:84

A4H3L4              	100.00%		L0PBS9              	100.00%
Bootstrap support for A4H3L4 as seed ortholog is 100%.
Bootstrap support for L0PBS9 as seed ortholog is 100%.

Group of orthologs #671. Best score 84 bits
Score difference with first non-orthologous sequence - L.braziliensis:84 P.jiroveci:84

A4HPQ2              	100.00%		L0P990              	100.00%
Bootstrap support for A4HPQ2 as seed ortholog is 100%.
Bootstrap support for L0P990 as seed ortholog is 100%.

Group of orthologs #672. Best score 83 bits
Score difference with first non-orthologous sequence - L.braziliensis:83 P.jiroveci:83

A4H673              	100.00%		L0P9T3              	100.00%
Bootstrap support for A4H673 as seed ortholog is 100%.
Bootstrap support for L0P9T3 as seed ortholog is 100%.

Group of orthologs #673. Best score 83 bits
Score difference with first non-orthologous sequence - L.braziliensis:15 P.jiroveci:83

A4HBJ6              	100.00%		L0PCX3              	100.00%
Bootstrap support for A4HBJ6 as seed ortholog is 68%.
Alternative seed ortholog is A4HN30 (15 bits away from this cluster)
Bootstrap support for L0PCX3 as seed ortholog is 100%.

Group of orthologs #674. Best score 83 bits
Score difference with first non-orthologous sequence - L.braziliensis:83 P.jiroveci:83

A4HI21              	100.00%		L0PAJ6              	100.00%
Bootstrap support for A4HI21 as seed ortholog is 100%.
Bootstrap support for L0PAJ6 as seed ortholog is 100%.

Group of orthologs #675. Best score 83 bits
Score difference with first non-orthologous sequence - L.braziliensis:83 P.jiroveci:83

A4HNL9              	100.00%		L0PBD4              	100.00%
Bootstrap support for A4HNL9 as seed ortholog is 100%.
Bootstrap support for L0PBD4 as seed ortholog is 100%.

Group of orthologs #676. Best score 83 bits
Score difference with first non-orthologous sequence - L.braziliensis:83 P.jiroveci:83

A4HK87              	100.00%		L0PFU9              	100.00%
Bootstrap support for A4HK87 as seed ortholog is 100%.
Bootstrap support for L0PFU9 as seed ortholog is 100%.

Group of orthologs #677. Best score 82 bits
Score difference with first non-orthologous sequence - L.braziliensis:82 P.jiroveci:82

A4H3L1              	100.00%		L0P9H0              	100.00%
A4H3L0              	94.40%		
E9AI48              	6.40%		
Bootstrap support for A4H3L1 as seed ortholog is 100%.
Bootstrap support for L0P9H0 as seed ortholog is 100%.

Group of orthologs #678. Best score 81 bits
Score difference with first non-orthologous sequence - L.braziliensis:81 P.jiroveci:2

A4HQJ0              	100.00%		L0P9V0              	100.00%
A4HB24              	6.49%		
Bootstrap support for A4HQJ0 as seed ortholog is 100%.
Bootstrap support for L0P9V0 as seed ortholog is 45%.
Alternative seed ortholog is L0PEK0 (2 bits away from this cluster)

Group of orthologs #679. Best score 81 bits
Score difference with first non-orthologous sequence - L.braziliensis:81 P.jiroveci:81

A4HF72              	100.00%		L0P746              	100.00%
Bootstrap support for A4HF72 as seed ortholog is 100%.
Bootstrap support for L0P746 as seed ortholog is 100%.

Group of orthologs #680. Best score 81 bits
Score difference with first non-orthologous sequence - L.braziliensis:14 P.jiroveci:81

A4H5X6              	100.00%		L0PHH5              	100.00%
Bootstrap support for A4H5X6 as seed ortholog is 76%.
Bootstrap support for L0PHH5 as seed ortholog is 100%.

Group of orthologs #681. Best score 81 bits
Score difference with first non-orthologous sequence - L.braziliensis:14 P.jiroveci:4

A4HFQ3              	100.00%		L0PH42              	100.00%
Bootstrap support for A4HFQ3 as seed ortholog is 60%.
Alternative seed ortholog is A4HHM9 (14 bits away from this cluster)
Bootstrap support for L0PH42 as seed ortholog is 47%.
Alternative seed ortholog is L0PCQ6 (4 bits away from this cluster)

Group of orthologs #682. Best score 81 bits
Score difference with first non-orthologous sequence - L.braziliensis:81 P.jiroveci:81

A4HMP2              	100.00%		L0PAD3              	100.00%
Bootstrap support for A4HMP2 as seed ortholog is 100%.
Bootstrap support for L0PAD3 as seed ortholog is 100%.

Group of orthologs #683. Best score 81 bits
Score difference with first non-orthologous sequence - L.braziliensis:81 P.jiroveci:81

A4HQM0              	100.00%		L0P6R7              	100.00%
Bootstrap support for A4HQM0 as seed ortholog is 100%.
Bootstrap support for L0P6R7 as seed ortholog is 100%.

Group of orthologs #684. Best score 80 bits
Score difference with first non-orthologous sequence - L.braziliensis:80 P.jiroveci:80

A4H5B4              	100.00%		L0PB42              	100.00%
Bootstrap support for A4H5B4 as seed ortholog is 100%.
Bootstrap support for L0PB42 as seed ortholog is 100%.

Group of orthologs #685. Best score 80 bits
Score difference with first non-orthologous sequence - L.braziliensis:80 P.jiroveci:80

A4HMM2              	100.00%		L0P9D6              	100.00%
Bootstrap support for A4HMM2 as seed ortholog is 100%.
Bootstrap support for L0P9D6 as seed ortholog is 100%.

Group of orthologs #686. Best score 80 bits
Score difference with first non-orthologous sequence - L.braziliensis:80 P.jiroveci:80

A4HK50              	100.00%		L0PD30              	100.00%
Bootstrap support for A4HK50 as seed ortholog is 100%.
Bootstrap support for L0PD30 as seed ortholog is 100%.

Group of orthologs #687. Best score 80 bits
Score difference with first non-orthologous sequence - L.braziliensis:80 P.jiroveci:80

A4HP79              	100.00%		L0PDJ6              	100.00%
Bootstrap support for A4HP79 as seed ortholog is 100%.
Bootstrap support for L0PDJ6 as seed ortholog is 100%.

Group of orthologs #688. Best score 79 bits
Score difference with first non-orthologous sequence - L.braziliensis:79 P.jiroveci:79

A4H8K7              	100.00%		L0PG46              	100.00%
Bootstrap support for A4H8K7 as seed ortholog is 100%.
Bootstrap support for L0PG46 as seed ortholog is 100%.

Group of orthologs #689. Best score 79 bits
Score difference with first non-orthologous sequence - L.braziliensis:11 P.jiroveci:79

E9AIS6              	100.00%		L0PA37              	100.00%
Bootstrap support for E9AIS6 as seed ortholog is 76%.
Bootstrap support for L0PA37 as seed ortholog is 100%.

Group of orthologs #690. Best score 78 bits
Score difference with first non-orthologous sequence - L.braziliensis:78 P.jiroveci:78

A4HMK3              	100.00%		L0P935              	100.00%
Bootstrap support for A4HMK3 as seed ortholog is 100%.
Bootstrap support for L0P935 as seed ortholog is 100%.

Group of orthologs #691. Best score 78 bits
Score difference with first non-orthologous sequence - L.braziliensis:78 P.jiroveci:78

A4HPF8              	100.00%		L0PEX0              	100.00%
Bootstrap support for A4HPF8 as seed ortholog is 100%.
Bootstrap support for L0PEX0 as seed ortholog is 100%.

Group of orthologs #692. Best score 77 bits
Score difference with first non-orthologous sequence - L.braziliensis:77 P.jiroveci:77

A4H6F7              	100.00%		L0PBU6              	100.00%
Bootstrap support for A4H6F7 as seed ortholog is 100%.
Bootstrap support for L0PBU6 as seed ortholog is 100%.

Group of orthologs #693. Best score 77 bits
Score difference with first non-orthologous sequence - L.braziliensis:77 P.jiroveci:77

A4H7V7              	100.00%		L0PAH2              	100.00%
Bootstrap support for A4H7V7 as seed ortholog is 100%.
Bootstrap support for L0PAH2 as seed ortholog is 100%.

Group of orthologs #694. Best score 77 bits
Score difference with first non-orthologous sequence - L.braziliensis:77 P.jiroveci:77

A4H8F4              	100.00%		L0PC08              	100.00%
Bootstrap support for A4H8F4 as seed ortholog is 100%.
Bootstrap support for L0PC08 as seed ortholog is 100%.

Group of orthologs #695. Best score 77 bits
Score difference with first non-orthologous sequence - L.braziliensis:17 P.jiroveci:77

A4HBA3              	100.00%		L0PBA3              	100.00%
Bootstrap support for A4HBA3 as seed ortholog is 77%.
Bootstrap support for L0PBA3 as seed ortholog is 100%.

Group of orthologs #696. Best score 77 bits
Score difference with first non-orthologous sequence - L.braziliensis:77 P.jiroveci:77

A4HCB2              	100.00%		L0PB99              	100.00%
Bootstrap support for A4HCB2 as seed ortholog is 100%.
Bootstrap support for L0PB99 as seed ortholog is 100%.

Group of orthologs #697. Best score 77 bits
Score difference with first non-orthologous sequence - L.braziliensis:77 P.jiroveci:77

A4HIJ2              	100.00%		L0PFW7              	100.00%
Bootstrap support for A4HIJ2 as seed ortholog is 100%.
Bootstrap support for L0PFW7 as seed ortholog is 100%.

Group of orthologs #698. Best score 76 bits
Score difference with first non-orthologous sequence - L.braziliensis:76 P.jiroveci:76

A4H551              	100.00%		L0PH83              	100.00%
Bootstrap support for A4H551 as seed ortholog is 100%.
Bootstrap support for L0PH83 as seed ortholog is 100%.

Group of orthologs #699. Best score 76 bits
Score difference with first non-orthologous sequence - L.braziliensis:13 P.jiroveci:76

A4HDR5              	100.00%		L0P903              	100.00%
Bootstrap support for A4HDR5 as seed ortholog is 62%.
Alternative seed ortholog is A4HM71 (13 bits away from this cluster)
Bootstrap support for L0P903 as seed ortholog is 100%.

Group of orthologs #700. Best score 76 bits
Score difference with first non-orthologous sequence - L.braziliensis:76 P.jiroveci:76

A4HC25              	100.00%		L0PC75              	100.00%
Bootstrap support for A4HC25 as seed ortholog is 100%.
Bootstrap support for L0PC75 as seed ortholog is 100%.

Group of orthologs #701. Best score 76 bits
Score difference with first non-orthologous sequence - L.braziliensis:19 P.jiroveci:76

A4HD71              	100.00%		L0PBZ4              	100.00%
Bootstrap support for A4HD71 as seed ortholog is 77%.
Bootstrap support for L0PBZ4 as seed ortholog is 100%.

Group of orthologs #702. Best score 76 bits
Score difference with first non-orthologous sequence - L.braziliensis:76 P.jiroveci:76

A4HDS2              	100.00%		L0PC82              	100.00%
Bootstrap support for A4HDS2 as seed ortholog is 100%.
Bootstrap support for L0PC82 as seed ortholog is 100%.

Group of orthologs #703. Best score 76 bits
Score difference with first non-orthologous sequence - L.braziliensis:76 P.jiroveci:76

A4HNV7              	100.00%		L0PD00              	100.00%
Bootstrap support for A4HNV7 as seed ortholog is 100%.
Bootstrap support for L0PD00 as seed ortholog is 100%.

Group of orthologs #704. Best score 76 bits
Score difference with first non-orthologous sequence - L.braziliensis:76 P.jiroveci:76

E9AI53              	100.00%		L0PG08              	100.00%
Bootstrap support for E9AI53 as seed ortholog is 100%.
Bootstrap support for L0PG08 as seed ortholog is 100%.

Group of orthologs #705. Best score 74 bits
Score difference with first non-orthologous sequence - L.braziliensis:74 P.jiroveci:74

A4HI18              	100.00%		L0PGH5              	100.00%
A4HI20              	100.00%		
Bootstrap support for A4HI18 as seed ortholog is 100%.
Bootstrap support for A4HI20 as seed ortholog is 100%.
Bootstrap support for L0PGH5 as seed ortholog is 100%.

Group of orthologs #706. Best score 74 bits
Score difference with first non-orthologous sequence - L.braziliensis:74 P.jiroveci:74

A4H9X6              	100.00%		L0P7D7              	100.00%
Bootstrap support for A4H9X6 as seed ortholog is 100%.
Bootstrap support for L0P7D7 as seed ortholog is 100%.

Group of orthologs #707. Best score 74 bits
Score difference with first non-orthologous sequence - L.braziliensis:74 P.jiroveci:74

A4H663              	100.00%		L0PDX2              	100.00%
Bootstrap support for A4H663 as seed ortholog is 100%.
Bootstrap support for L0PDX2 as seed ortholog is 100%.

Group of orthologs #708. Best score 74 bits
Score difference with first non-orthologous sequence - L.braziliensis:8 P.jiroveci:74

A4H8B5              	100.00%		L0PDG4              	100.00%
Bootstrap support for A4H8B5 as seed ortholog is 74%.
Alternative seed ortholog is A4HBC1 (8 bits away from this cluster)
Bootstrap support for L0PDG4 as seed ortholog is 100%.

Group of orthologs #709. Best score 74 bits
Score difference with first non-orthologous sequence - L.braziliensis:74 P.jiroveci:74

A4H990              	100.00%		L0PH23              	100.00%
Bootstrap support for A4H990 as seed ortholog is 100%.
Bootstrap support for L0PH23 as seed ortholog is 100%.

Group of orthologs #710. Best score 73 bits
Score difference with first non-orthologous sequence - L.braziliensis:73 P.jiroveci:73

A4H710              	100.00%		L0PFS1              	100.00%
Bootstrap support for A4H710 as seed ortholog is 100%.
Bootstrap support for L0PFS1 as seed ortholog is 100%.

Group of orthologs #711. Best score 73 bits
Score difference with first non-orthologous sequence - L.braziliensis:73 P.jiroveci:73

A4HM50              	100.00%		L0P938              	100.00%
Bootstrap support for A4HM50 as seed ortholog is 100%.
Bootstrap support for L0P938 as seed ortholog is 100%.

Group of orthologs #712. Best score 72 bits
Score difference with first non-orthologous sequence - L.braziliensis:72 P.jiroveci:72

A4H5Y9              	100.00%		L0PG13              	100.00%
A4HAV8              	97.31%		
Bootstrap support for A4H5Y9 as seed ortholog is 100%.
Bootstrap support for L0PG13 as seed ortholog is 100%.

Group of orthologs #713. Best score 72 bits
Score difference with first non-orthologous sequence - L.braziliensis:16 P.jiroveci:72

A4H3U9              	100.00%		L0PDS6              	100.00%
Bootstrap support for A4H3U9 as seed ortholog is 64%.
Alternative seed ortholog is A4HPT6 (16 bits away from this cluster)
Bootstrap support for L0PDS6 as seed ortholog is 100%.

Group of orthologs #714. Best score 72 bits
Score difference with first non-orthologous sequence - L.braziliensis:72 P.jiroveci:72

A4H9F4              	100.00%		L0PD90              	100.00%
Bootstrap support for A4H9F4 as seed ortholog is 100%.
Bootstrap support for L0PD90 as seed ortholog is 100%.

Group of orthologs #715. Best score 72 bits
Score difference with first non-orthologous sequence - L.braziliensis:72 P.jiroveci:72

A4HE17              	100.00%		L0PE66              	100.00%
Bootstrap support for A4HE17 as seed ortholog is 100%.
Bootstrap support for L0PE66 as seed ortholog is 100%.

Group of orthologs #716. Best score 72 bits
Score difference with first non-orthologous sequence - L.braziliensis:72 P.jiroveci:72

A4HF93              	100.00%		L0PFD1              	100.00%
Bootstrap support for A4HF93 as seed ortholog is 100%.
Bootstrap support for L0PFD1 as seed ortholog is 100%.

Group of orthologs #717. Best score 71 bits
Score difference with first non-orthologous sequence - L.braziliensis:71 P.jiroveci:71

A4H6R5              	100.00%		L0P834              	100.00%
Bootstrap support for A4H6R5 as seed ortholog is 100%.
Bootstrap support for L0P834 as seed ortholog is 100%.

Group of orthologs #718. Best score 71 bits
Score difference with first non-orthologous sequence - L.braziliensis:71 P.jiroveci:71

A4H3A7              	100.00%		L0PDI7              	100.00%
Bootstrap support for A4H3A7 as seed ortholog is 100%.
Bootstrap support for L0PDI7 as seed ortholog is 100%.

Group of orthologs #719. Best score 71 bits
Score difference with first non-orthologous sequence - L.braziliensis:71 P.jiroveci:71

A4H3Q4              	100.00%		L0PEB3              	100.00%
Bootstrap support for A4H3Q4 as seed ortholog is 100%.
Bootstrap support for L0PEB3 as seed ortholog is 100%.

Group of orthologs #720. Best score 71 bits
Score difference with first non-orthologous sequence - L.braziliensis:71 P.jiroveci:71

A4H7I4              	100.00%		L0PDT5              	100.00%
Bootstrap support for A4H7I4 as seed ortholog is 100%.
Bootstrap support for L0PDT5 as seed ortholog is 100%.

Group of orthologs #721. Best score 71 bits
Score difference with first non-orthologous sequence - L.braziliensis:71 P.jiroveci:71

A4HD60              	100.00%		L0P8D7              	100.00%
Bootstrap support for A4HD60 as seed ortholog is 100%.
Bootstrap support for L0P8D7 as seed ortholog is 100%.

Group of orthologs #722. Best score 71 bits
Score difference with first non-orthologous sequence - L.braziliensis:11 P.jiroveci:71

A4HH15              	100.00%		L0PA43              	100.00%
Bootstrap support for A4HH15 as seed ortholog is 61%.
Alternative seed ortholog is A4HMT8 (11 bits away from this cluster)
Bootstrap support for L0PA43 as seed ortholog is 100%.

Group of orthologs #723. Best score 71 bits
Score difference with first non-orthologous sequence - L.braziliensis:71 P.jiroveci:71

A4HE41              	100.00%		L0PII9              	100.00%
Bootstrap support for A4HE41 as seed ortholog is 100%.
Bootstrap support for L0PII9 as seed ortholog is 100%.

Group of orthologs #724. Best score 71 bits
Score difference with first non-orthologous sequence - L.braziliensis:71 P.jiroveci:71

A4HNW7              	100.00%		L0PA83              	100.00%
Bootstrap support for A4HNW7 as seed ortholog is 100%.
Bootstrap support for L0PA83 as seed ortholog is 100%.

Group of orthologs #725. Best score 70 bits
Score difference with first non-orthologous sequence - L.braziliensis:70 P.jiroveci:70

A4HF18              	100.00%		L0P8G4              	100.00%
Bootstrap support for A4HF18 as seed ortholog is 100%.
Bootstrap support for L0P8G4 as seed ortholog is 100%.

Group of orthologs #726. Best score 70 bits
Score difference with first non-orthologous sequence - L.braziliensis:70 P.jiroveci:70

A4HI13              	100.00%		L0PEB4              	100.00%
Bootstrap support for A4HI13 as seed ortholog is 100%.
Bootstrap support for L0PEB4 as seed ortholog is 100%.

Group of orthologs #727. Best score 70 bits
Score difference with first non-orthologous sequence - L.braziliensis:70 P.jiroveci:70

A4HNC6              	100.00%		L0PAD9              	100.00%
Bootstrap support for A4HNC6 as seed ortholog is 100%.
Bootstrap support for L0PAD9 as seed ortholog is 100%.

Group of orthologs #728. Best score 70 bits
Score difference with first non-orthologous sequence - L.braziliensis:70 P.jiroveci:70

A4HQ33              	100.00%		L0PCX8              	100.00%
Bootstrap support for A4HQ33 as seed ortholog is 100%.
Bootstrap support for L0PCX8 as seed ortholog is 100%.

Group of orthologs #729. Best score 69 bits
Score difference with first non-orthologous sequence - L.braziliensis:69 P.jiroveci:69

A4HML2              	100.00%		L0P9F1              	100.00%
A4HBR9              	95.83%		
Bootstrap support for A4HML2 as seed ortholog is 100%.
Bootstrap support for L0P9F1 as seed ortholog is 100%.

Group of orthologs #730. Best score 69 bits
Score difference with first non-orthologous sequence - L.braziliensis:8 P.jiroveci:69

A4HEC1              	100.00%		L0P914              	100.00%
Bootstrap support for A4HEC1 as seed ortholog is 67%.
Alternative seed ortholog is A4HIH2 (8 bits away from this cluster)
Bootstrap support for L0P914 as seed ortholog is 100%.

Group of orthologs #731. Best score 69 bits
Score difference with first non-orthologous sequence - L.braziliensis:69 P.jiroveci:69

A4HMZ5              	100.00%		L0P940              	100.00%
Bootstrap support for A4HMZ5 as seed ortholog is 100%.
Bootstrap support for L0P940 as seed ortholog is 100%.

Group of orthologs #732. Best score 68 bits
Score difference with first non-orthologous sequence - L.braziliensis:68 P.jiroveci:68

A4H9Z8              	100.00%		L0PAG4              	100.00%
Bootstrap support for A4H9Z8 as seed ortholog is 100%.
Bootstrap support for L0PAG4 as seed ortholog is 100%.

Group of orthologs #733. Best score 68 bits
Score difference with first non-orthologous sequence - L.braziliensis:68 P.jiroveci:68

A4HDW4              	100.00%		L0PBP4              	100.00%
Bootstrap support for A4HDW4 as seed ortholog is 100%.
Bootstrap support for L0PBP4 as seed ortholog is 100%.

Group of orthologs #734. Best score 68 bits
Score difference with first non-orthologous sequence - L.braziliensis:68 P.jiroveci:68

A4HFB4              	100.00%		L0PAW7              	100.00%
Bootstrap support for A4HFB4 as seed ortholog is 100%.
Bootstrap support for L0PAW7 as seed ortholog is 100%.

Group of orthologs #735. Best score 68 bits
Score difference with first non-orthologous sequence - L.braziliensis:68 P.jiroveci:68

A4HIU6              	100.00%		L0PBK9              	100.00%
Bootstrap support for A4HIU6 as seed ortholog is 100%.
Bootstrap support for L0PBK9 as seed ortholog is 100%.

Group of orthologs #736. Best score 67 bits
Score difference with first non-orthologous sequence - L.braziliensis:67 P.jiroveci:67

A4H351              	100.00%		L0P9W7              	100.00%
Bootstrap support for A4H351 as seed ortholog is 100%.
Bootstrap support for L0P9W7 as seed ortholog is 100%.

Group of orthologs #737. Best score 67 bits
Score difference with first non-orthologous sequence - L.braziliensis:67 P.jiroveci:67

A4H9K0              	100.00%		L0PAP4              	100.00%
Bootstrap support for A4H9K0 as seed ortholog is 100%.
Bootstrap support for L0PAP4 as seed ortholog is 100%.

Group of orthologs #738. Best score 67 bits
Score difference with first non-orthologous sequence - L.braziliensis:67 P.jiroveci:67

A4HEC5              	100.00%		L0P7S7              	100.00%
Bootstrap support for A4HEC5 as seed ortholog is 100%.
Bootstrap support for L0P7S7 as seed ortholog is 100%.

Group of orthologs #739. Best score 67 bits
Score difference with first non-orthologous sequence - L.braziliensis:67 P.jiroveci:67

A4HBQ1              	100.00%		L0PCT7              	100.00%
Bootstrap support for A4HBQ1 as seed ortholog is 100%.
Bootstrap support for L0PCT7 as seed ortholog is 100%.

Group of orthologs #740. Best score 67 bits
Score difference with first non-orthologous sequence - L.braziliensis:67 P.jiroveci:67

A4HHN4              	100.00%		L0PBG3              	100.00%
Bootstrap support for A4HHN4 as seed ortholog is 100%.
Bootstrap support for L0PBG3 as seed ortholog is 100%.

Group of orthologs #741. Best score 67 bits
Score difference with first non-orthologous sequence - L.braziliensis:67 P.jiroveci:67

A4HH04              	100.00%		L0PCF7              	100.00%
Bootstrap support for A4HH04 as seed ortholog is 100%.
Bootstrap support for L0PCF7 as seed ortholog is 100%.

Group of orthologs #742. Best score 66 bits
Score difference with first non-orthologous sequence - L.braziliensis:66 P.jiroveci:66

A4HEQ6              	100.00%		L0PD70              	100.00%
A4HHT8              	6.73%		L0P9Q7              	84.27%
Bootstrap support for A4HEQ6 as seed ortholog is 100%.
Bootstrap support for L0PD70 as seed ortholog is 100%.

Group of orthologs #743. Best score 66 bits
Score difference with first non-orthologous sequence - L.braziliensis:66 P.jiroveci:66

A4H3I5              	100.00%		L0PA67              	100.00%
Bootstrap support for A4H3I5 as seed ortholog is 100%.
Bootstrap support for L0PA67 as seed ortholog is 100%.

Group of orthologs #744. Best score 66 bits
Score difference with first non-orthologous sequence - L.braziliensis:66 P.jiroveci:66

A4HDH8              	100.00%		L0PEP9              	100.00%
Bootstrap support for A4HDH8 as seed ortholog is 100%.
Bootstrap support for L0PEP9 as seed ortholog is 100%.

Group of orthologs #745. Best score 66 bits
Score difference with first non-orthologous sequence - L.braziliensis:66 P.jiroveci:66

A4HI73              	100.00%		L0P9Z6              	100.00%
Bootstrap support for A4HI73 as seed ortholog is 100%.
Bootstrap support for L0P9Z6 as seed ortholog is 100%.

Group of orthologs #746. Best score 66 bits
Score difference with first non-orthologous sequence - L.braziliensis:66 P.jiroveci:66

A4HIA9              	100.00%		L0PAV4              	100.00%
Bootstrap support for A4HIA9 as seed ortholog is 100%.
Bootstrap support for L0PAV4 as seed ortholog is 100%.

Group of orthologs #747. Best score 66 bits
Score difference with first non-orthologous sequence - L.braziliensis:66 P.jiroveci:66

A4HMG2              	100.00%		L0P9F2              	100.00%
Bootstrap support for A4HMG2 as seed ortholog is 100%.
Bootstrap support for L0P9F2 as seed ortholog is 100%.

Group of orthologs #748. Best score 66 bits
Score difference with first non-orthologous sequence - L.braziliensis:66 P.jiroveci:21

A4HM26              	100.00%		L0P9W6              	100.00%
Bootstrap support for A4HM26 as seed ortholog is 100%.
Bootstrap support for L0P9W6 as seed ortholog is 84%.

Group of orthologs #749. Best score 66 bits
Score difference with first non-orthologous sequence - L.braziliensis:66 P.jiroveci:66

A4HFU0              	100.00%		L0PGR5              	100.00%
Bootstrap support for A4HFU0 as seed ortholog is 100%.
Bootstrap support for L0PGR5 as seed ortholog is 100%.

Group of orthologs #750. Best score 66 bits
Score difference with first non-orthologous sequence - L.braziliensis:66 P.jiroveci:66

A4HM60              	100.00%		L0PEE1              	100.00%
Bootstrap support for A4HM60 as seed ortholog is 100%.
Bootstrap support for L0PEE1 as seed ortholog is 100%.

Group of orthologs #751. Best score 66 bits
Score difference with first non-orthologous sequence - L.braziliensis:66 P.jiroveci:66

A4HMK6              	100.00%		L0PE10              	100.00%
Bootstrap support for A4HMK6 as seed ortholog is 100%.
Bootstrap support for L0PE10 as seed ortholog is 100%.

Group of orthologs #752. Best score 65 bits
Score difference with first non-orthologous sequence - L.braziliensis:65 P.jiroveci:65

A4HJI4              	100.00%		L0P7D2              	100.00%
A4HJH1              	99.33%		
A4HJG9              	99.11%		
A4HLM2              	70.92%		
Bootstrap support for A4HJI4 as seed ortholog is 100%.
Bootstrap support for L0P7D2 as seed ortholog is 100%.

Group of orthologs #753. Best score 65 bits
Score difference with first non-orthologous sequence - L.braziliensis:65 P.jiroveci:65

A4H8A9              	100.00%		L0PFI5              	100.00%
Bootstrap support for A4H8A9 as seed ortholog is 100%.
Bootstrap support for L0PFI5 as seed ortholog is 100%.

Group of orthologs #754. Best score 65 bits
Score difference with first non-orthologous sequence - L.braziliensis:65 P.jiroveci:65

E9AIG3              	100.00%		L0PDZ3              	100.00%
Bootstrap support for E9AIG3 as seed ortholog is 100%.
Bootstrap support for L0PDZ3 as seed ortholog is 100%.

Group of orthologs #755. Best score 64 bits
Score difference with first non-orthologous sequence - L.braziliensis:64 P.jiroveci:64

A4H4G4              	100.00%		L0PG35              	100.00%
Bootstrap support for A4H4G4 as seed ortholog is 100%.
Bootstrap support for L0PG35 as seed ortholog is 100%.

Group of orthologs #756. Best score 63 bits
Score difference with first non-orthologous sequence - L.braziliensis:63 P.jiroveci:63

A4HE62              	100.00%		L0PEF7              	100.00%
A4HAF8              	94.71%		
Bootstrap support for A4HE62 as seed ortholog is 100%.
Bootstrap support for L0PEF7 as seed ortholog is 100%.

Group of orthologs #757. Best score 63 bits
Score difference with first non-orthologous sequence - L.braziliensis:63 P.jiroveci:63

A4HA45              	100.00%		L0PC28              	100.00%
Bootstrap support for A4HA45 as seed ortholog is 100%.
Bootstrap support for L0PC28 as seed ortholog is 100%.

Group of orthologs #758. Best score 63 bits
Score difference with first non-orthologous sequence - L.braziliensis:13 P.jiroveci:63

A4HGA5              	100.00%		L0PEJ9              	100.00%
Bootstrap support for A4HGA5 as seed ortholog is 60%.
Alternative seed ortholog is A4HJY5 (13 bits away from this cluster)
Bootstrap support for L0PEJ9 as seed ortholog is 100%.

Group of orthologs #759. Best score 62 bits
Score difference with first non-orthologous sequence - L.braziliensis:62 P.jiroveci:62

A4HGJ9              	100.00%		L0PBQ7              	100.00%
A4HGK0              	82.13%		
Bootstrap support for A4HGJ9 as seed ortholog is 100%.
Bootstrap support for L0PBQ7 as seed ortholog is 100%.

Group of orthologs #760. Best score 62 bits
Score difference with first non-orthologous sequence - L.braziliensis:62 P.jiroveci:62

A4HIF7              	100.00%		L0P6S2              	100.00%
Bootstrap support for A4HIF7 as seed ortholog is 100%.
Bootstrap support for L0P6S2 as seed ortholog is 100%.

Group of orthologs #761. Best score 62 bits
Score difference with first non-orthologous sequence - L.braziliensis:62 P.jiroveci:62

A4HE90              	100.00%		L0PEE9              	100.00%
Bootstrap support for A4HE90 as seed ortholog is 100%.
Bootstrap support for L0PEE9 as seed ortholog is 100%.

Group of orthologs #762. Best score 61 bits
Score difference with first non-orthologous sequence - L.braziliensis:4 P.jiroveci:61

A4HG15              	100.00%		L0PCZ0              	100.00%
A4H570              	6.67%		
Bootstrap support for A4HG15 as seed ortholog is 60%.
Alternative seed ortholog is A4HBY4 (4 bits away from this cluster)
Bootstrap support for L0PCZ0 as seed ortholog is 100%.

Group of orthologs #763. Best score 61 bits
Score difference with first non-orthologous sequence - L.braziliensis:61 P.jiroveci:61

A4H7C9              	100.00%		L0PE37              	100.00%
Bootstrap support for A4H7C9 as seed ortholog is 100%.
Bootstrap support for L0PE37 as seed ortholog is 100%.

Group of orthologs #764. Best score 61 bits
Score difference with first non-orthologous sequence - L.braziliensis:61 P.jiroveci:61

A4HFY1              	100.00%		L0PAM7              	100.00%
Bootstrap support for A4HFY1 as seed ortholog is 100%.
Bootstrap support for L0PAM7 as seed ortholog is 100%.

Group of orthologs #765. Best score 61 bits
Score difference with first non-orthologous sequence - L.braziliensis:4 P.jiroveci:61

A4HGR0              	100.00%		L0PE14              	100.00%
Bootstrap support for A4HGR0 as seed ortholog is 55%.
Alternative seed ortholog is A4HFT2 (4 bits away from this cluster)
Bootstrap support for L0PE14 as seed ortholog is 100%.

Group of orthologs #766. Best score 61 bits
Score difference with first non-orthologous sequence - L.braziliensis:61 P.jiroveci:61

A4HMF6              	100.00%		L0PBZ3              	100.00%
Bootstrap support for A4HMF6 as seed ortholog is 100%.
Bootstrap support for L0PBZ3 as seed ortholog is 100%.

Group of orthologs #767. Best score 60 bits
Score difference with first non-orthologous sequence - L.braziliensis:60 P.jiroveci:60

A4HGC3              	100.00%		L0P8R9              	100.00%
Bootstrap support for A4HGC3 as seed ortholog is 100%.
Bootstrap support for L0P8R9 as seed ortholog is 100%.

Group of orthologs #768. Best score 59 bits
Score difference with first non-orthologous sequence - L.braziliensis:59 P.jiroveci:59

A4HLC4              	100.00%		L0PAE2              	100.00%
A4HP58              	100.00%		
Bootstrap support for A4HLC4 as seed ortholog is 100%.
Bootstrap support for A4HP58 as seed ortholog is 100%.
Bootstrap support for L0PAE2 as seed ortholog is 100%.

Group of orthologs #769. Best score 59 bits
Score difference with first non-orthologous sequence - L.braziliensis:59 P.jiroveci:59

A4HFA7              	100.00%		L0P995              	100.00%
Bootstrap support for A4HFA7 as seed ortholog is 100%.
Bootstrap support for L0P995 as seed ortholog is 100%.

Group of orthologs #770. Best score 59 bits
Score difference with first non-orthologous sequence - L.braziliensis:59 P.jiroveci:59

A4HIT1              	100.00%		L0P8Q6              	100.00%
Bootstrap support for A4HIT1 as seed ortholog is 100%.
Bootstrap support for L0P8Q6 as seed ortholog is 100%.

Group of orthologs #771. Best score 59 bits
Score difference with first non-orthologous sequence - L.braziliensis:59 P.jiroveci:59

A4HK02              	100.00%		L0PAF9              	100.00%
Bootstrap support for A4HK02 as seed ortholog is 100%.
Bootstrap support for L0PAF9 as seed ortholog is 100%.

Group of orthologs #772. Best score 59 bits
Score difference with first non-orthologous sequence - L.braziliensis:59 P.jiroveci:59

A4HML7              	100.00%		L0PD60              	100.00%
Bootstrap support for A4HML7 as seed ortholog is 100%.
Bootstrap support for L0PD60 as seed ortholog is 100%.

Group of orthologs #773. Best score 58 bits
Score difference with first non-orthologous sequence - L.braziliensis:58 P.jiroveci:58

A4H6V7              	100.00%		L0PF86              	100.00%
                    	       		L0PC10              	87.99%
Bootstrap support for A4H6V7 as seed ortholog is 100%.
Bootstrap support for L0PF86 as seed ortholog is 100%.

Group of orthologs #774. Best score 58 bits
Score difference with first non-orthologous sequence - L.braziliensis:58 P.jiroveci:58

A4HKB6              	100.00%		L0P7Z9              	100.00%
Bootstrap support for A4HKB6 as seed ortholog is 100%.
Bootstrap support for L0P7Z9 as seed ortholog is 100%.

Group of orthologs #775. Best score 57 bits
Score difference with first non-orthologous sequence - L.braziliensis:57 P.jiroveci:57

A4HPP5              	100.00%		L0PB34              	100.00%
Bootstrap support for A4HPP5 as seed ortholog is 100%.
Bootstrap support for L0PB34 as seed ortholog is 100%.

Group of orthologs #776. Best score 56 bits
Score difference with first non-orthologous sequence - L.braziliensis:56 P.jiroveci:56

A4HAS6              	100.00%		L0PFK9              	100.00%
A4HCZ2              	100.00%		
Bootstrap support for A4HAS6 as seed ortholog is 100%.
Bootstrap support for A4HCZ2 as seed ortholog is 100%.
Bootstrap support for L0PFK9 as seed ortholog is 100%.

Group of orthologs #777. Best score 56 bits
Score difference with first non-orthologous sequence - L.braziliensis:56 P.jiroveci:56

A4HJS8              	100.00%		L0PFR0              	100.00%
Bootstrap support for A4HJS8 as seed ortholog is 100%.
Bootstrap support for L0PFR0 as seed ortholog is 100%.

Group of orthologs #778. Best score 55 bits
Score difference with first non-orthologous sequence - L.braziliensis:55 P.jiroveci:55

A4HCY0              	100.00%		L0P963              	100.00%
Bootstrap support for A4HCY0 as seed ortholog is 100%.
Bootstrap support for L0P963 as seed ortholog is 100%.

Group of orthologs #779. Best score 54 bits
Score difference with first non-orthologous sequence - L.braziliensis:9 P.jiroveci:54

A4H907              	100.00%		L0PFM9              	100.00%
A4H905              	83.11%		
Bootstrap support for A4H907 as seed ortholog is 74%.
Alternative seed ortholog is A4HAX7 (9 bits away from this cluster)
Bootstrap support for L0PFM9 as seed ortholog is 100%.

Group of orthologs #780. Best score 54 bits
Score difference with first non-orthologous sequence - L.braziliensis:54 P.jiroveci:54

A4HH94              	100.00%		L0PB77              	100.00%
Bootstrap support for A4HH94 as seed ortholog is 100%.
Bootstrap support for L0PB77 as seed ortholog is 100%.

Group of orthologs #781. Best score 54 bits
Score difference with first non-orthologous sequence - L.braziliensis:54 P.jiroveci:54

A4HKI5              	100.00%		L0PC89              	100.00%
Bootstrap support for A4HKI5 as seed ortholog is 100%.
Bootstrap support for L0PC89 as seed ortholog is 100%.

Group of orthologs #782. Best score 54 bits
Score difference with first non-orthologous sequence - L.braziliensis:54 P.jiroveci:54

A4HK89              	100.00%		L0PCQ5              	100.00%
Bootstrap support for A4HK89 as seed ortholog is 100%.
Bootstrap support for L0PCQ5 as seed ortholog is 100%.

Group of orthologs #783. Best score 53 bits
Score difference with first non-orthologous sequence - L.braziliensis:53 P.jiroveci:53

A4H3T3              	100.00%		L0P7T7              	100.00%
Bootstrap support for A4H3T3 as seed ortholog is 100%.
Bootstrap support for L0P7T7 as seed ortholog is 100%.

Group of orthologs #784. Best score 53 bits
Score difference with first non-orthologous sequence - L.braziliensis:53 P.jiroveci:53

A4HDM8              	100.00%		L0PG81              	100.00%
Bootstrap support for A4HDM8 as seed ortholog is 100%.
Bootstrap support for L0PG81 as seed ortholog is 100%.

Group of orthologs #785. Best score 52 bits
Score difference with first non-orthologous sequence - L.braziliensis:52 P.jiroveci:52

A4HHN9              	100.00%		L0P805              	100.00%
A4HM58              	17.23%		
A4HQK0              	14.06%		
Bootstrap support for A4HHN9 as seed ortholog is 100%.
Bootstrap support for L0P805 as seed ortholog is 100%.

Group of orthologs #786. Best score 52 bits
Score difference with first non-orthologous sequence - L.braziliensis:52 P.jiroveci:52

A4H8N9              	100.00%		L0PCH1              	100.00%
Bootstrap support for A4H8N9 as seed ortholog is 100%.
Bootstrap support for L0PCH1 as seed ortholog is 100%.

Group of orthologs #787. Best score 52 bits
Score difference with first non-orthologous sequence - L.braziliensis:52 P.jiroveci:52

A4HMR6              	100.00%		L0PD33              	100.00%
Bootstrap support for A4HMR6 as seed ortholog is 100%.
Bootstrap support for L0PD33 as seed ortholog is 100%.

Group of orthologs #788. Best score 51 bits
Score difference with first non-orthologous sequence - L.braziliensis:51 P.jiroveci:51

A4HNB4              	100.00%		L0PFA1              	100.00%
Bootstrap support for A4HNB4 as seed ortholog is 100%.
Bootstrap support for L0PFA1 as seed ortholog is 100%.

Group of orthologs #789. Best score 50 bits
Score difference with first non-orthologous sequence - L.braziliensis:50 P.jiroveci:50

A4HJI8              	100.00%		L0PG69              	100.00%
A4HJI9              	42.68%		
A4HJI7              	31.86%		
A4HKB3              	14.33%		
A4HKB4              	10.37%		
Bootstrap support for A4HJI8 as seed ortholog is 100%.
Bootstrap support for L0PG69 as seed ortholog is 100%.

Group of orthologs #790. Best score 50 bits
Score difference with first non-orthologous sequence - L.braziliensis:50 P.jiroveci:50

A4H9U2              	100.00%		L0P9C4              	100.00%
Bootstrap support for A4H9U2 as seed ortholog is 100%.
Bootstrap support for L0P9C4 as seed ortholog is 100%.

Group of orthologs #791. Best score 50 bits
Score difference with first non-orthologous sequence - L.braziliensis:50 P.jiroveci:50

A4HDR6              	100.00%		L0P881              	100.00%
Bootstrap support for A4HDR6 as seed ortholog is 100%.
Bootstrap support for L0P881 as seed ortholog is 100%.

Group of orthologs #792. Best score 50 bits
Score difference with first non-orthologous sequence - L.braziliensis:50 P.jiroveci:50

A4HKJ2              	100.00%		L0PDF0              	100.00%
Bootstrap support for A4HKJ2 as seed ortholog is 100%.
Bootstrap support for L0PDF0 as seed ortholog is 100%.

Group of orthologs #793. Best score 50 bits
Score difference with first non-orthologous sequence - L.braziliensis:50 P.jiroveci:50

A4HHV9              	100.00%		L0PGS0              	100.00%
Bootstrap support for A4HHV9 as seed ortholog is 100%.
Bootstrap support for L0PGS0 as seed ortholog is 100%.

Group of orthologs #794. Best score 50 bits
Score difference with first non-orthologous sequence - L.braziliensis:50 P.jiroveci:50

A4HN25              	100.00%		L0PBQ3              	100.00%
Bootstrap support for A4HN25 as seed ortholog is 100%.
Bootstrap support for L0PBQ3 as seed ortholog is 100%.

Group of orthologs #795. Best score 50 bits
Score difference with first non-orthologous sequence - L.braziliensis:50 P.jiroveci:50

A4HN80              	100.00%		L0PGR9              	100.00%
Bootstrap support for A4HN80 as seed ortholog is 100%.
Bootstrap support for L0PGR9 as seed ortholog is 100%.

Group of orthologs #796. Best score 48 bits
Score difference with first non-orthologous sequence - L.braziliensis:48 P.jiroveci:48

A4H8B9              	100.00%		L0PBR0              	100.00%
Bootstrap support for A4H8B9 as seed ortholog is 100%.
Bootstrap support for L0PBR0 as seed ortholog is 100%.

Group of orthologs #797. Best score 47 bits
Score difference with first non-orthologous sequence - L.braziliensis:47 P.jiroveci:47

A4H7W9              	100.00%		L0PEZ0              	100.00%
                    	       		L0P9K4              	10.21%
Bootstrap support for A4H7W9 as seed ortholog is 100%.
Bootstrap support for L0PEZ0 as seed ortholog is 100%.

Group of orthologs #798. Best score 47 bits
Score difference with first non-orthologous sequence - L.braziliensis:47 P.jiroveci:47

A4HLQ4              	100.00%		L0P925              	100.00%
A4HJX0              	86.51%		
Bootstrap support for A4HLQ4 as seed ortholog is 100%.
Bootstrap support for L0P925 as seed ortholog is 100%.

Group of orthologs #799. Best score 47 bits
Score difference with first non-orthologous sequence - L.braziliensis:47 P.jiroveci:47

A4H4I3              	100.00%		L0PB39              	100.00%
Bootstrap support for A4H4I3 as seed ortholog is 100%.
Bootstrap support for L0PB39 as seed ortholog is 100%.

Group of orthologs #800. Best score 47 bits
Score difference with first non-orthologous sequence - L.braziliensis:47 P.jiroveci:47

A4HCJ1              	100.00%		L0PCX6              	100.00%
Bootstrap support for A4HCJ1 as seed ortholog is 100%.
Bootstrap support for L0PCX6 as seed ortholog is 100%.

Group of orthologs #801. Best score 47 bits
Score difference with first non-orthologous sequence - L.braziliensis:47 P.jiroveci:47

A4HG54              	100.00%		L0P9R5              	100.00%
Bootstrap support for A4HG54 as seed ortholog is 100%.
Bootstrap support for L0P9R5 as seed ortholog is 100%.

Group of orthologs #802. Best score 47 bits
Score difference with first non-orthologous sequence - L.braziliensis:47 P.jiroveci:47

A4HDQ3              	100.00%		L0PFK1              	100.00%
Bootstrap support for A4HDQ3 as seed ortholog is 100%.
Bootstrap support for L0PFK1 as seed ortholog is 100%.

Group of orthologs #803. Best score 47 bits
Score difference with first non-orthologous sequence - L.braziliensis:47 P.jiroveci:47

A4HKU0              	100.00%		L0PE16              	100.00%
Bootstrap support for A4HKU0 as seed ortholog is 100%.
Bootstrap support for L0PE16 as seed ortholog is 100%.

Group of orthologs #804. Best score 46 bits
Score difference with first non-orthologous sequence - L.braziliensis:46 P.jiroveci:46

A4H359              	100.00%		L0PAK0              	100.00%
Bootstrap support for A4H359 as seed ortholog is 100%.
Bootstrap support for L0PAK0 as seed ortholog is 100%.

Group of orthologs #805. Best score 46 bits
Score difference with first non-orthologous sequence - L.braziliensis:46 P.jiroveci:46

A4H5V3              	100.00%		L0P9X3              	100.00%
Bootstrap support for A4H5V3 as seed ortholog is 100%.
Bootstrap support for L0P9X3 as seed ortholog is 100%.

Group of orthologs #806. Best score 46 bits
Score difference with first non-orthologous sequence - L.braziliensis:46 P.jiroveci:46

A4HK35              	100.00%		L0PAT4              	100.00%
Bootstrap support for A4HK35 as seed ortholog is 100%.
Bootstrap support for L0PAT4 as seed ortholog is 100%.

Group of orthologs #807. Best score 46 bits
Score difference with first non-orthologous sequence - L.braziliensis:46 P.jiroveci:46

A4HKR5              	100.00%		L0PAW0              	100.00%
Bootstrap support for A4HKR5 as seed ortholog is 100%.
Bootstrap support for L0PAW0 as seed ortholog is 100%.

Group of orthologs #808. Best score 45 bits
Score difference with first non-orthologous sequence - L.braziliensis:45 P.jiroveci:45

A4H9G7              	100.00%		L0PDN9              	100.00%
Bootstrap support for A4H9G7 as seed ortholog is 100%.
Bootstrap support for L0PDN9 as seed ortholog is 100%.

Group of orthologs #809. Best score 45 bits
Score difference with first non-orthologous sequence - L.braziliensis:45 P.jiroveci:45

A4HBA7              	100.00%		L0PE32              	100.00%
Bootstrap support for A4HBA7 as seed ortholog is 100%.
Bootstrap support for L0PE32 as seed ortholog is 100%.

Group of orthologs #810. Best score 45 bits
Score difference with first non-orthologous sequence - L.braziliensis:45 P.jiroveci:45

A4HLU5              	100.00%		L0PFP7              	100.00%
Bootstrap support for A4HLU5 as seed ortholog is 100%.
Bootstrap support for L0PFP7 as seed ortholog is 100%.

Group of orthologs #811. Best score 45 bits
Score difference with first non-orthologous sequence - L.braziliensis:45 P.jiroveci:45

E9AIN5              	100.00%		L0PH50              	100.00%
Bootstrap support for E9AIN5 as seed ortholog is 100%.
Bootstrap support for L0PH50 as seed ortholog is 100%.

Group of orthologs #812. Best score 43 bits
Score difference with first non-orthologous sequence - L.braziliensis:43 P.jiroveci:43

A4HHM6              	100.00%		L0P868              	100.00%
Bootstrap support for A4HHM6 as seed ortholog is 100%.
Bootstrap support for L0P868 as seed ortholog is 100%.

Group of orthologs #813. Best score 43 bits
Score difference with first non-orthologous sequence - L.braziliensis:43 P.jiroveci:43

A4HFX2              	100.00%		L0PB27              	100.00%
Bootstrap support for A4HFX2 as seed ortholog is 100%.
Bootstrap support for L0PB27 as seed ortholog is 100%.

Group of orthologs #814. Best score 43 bits
Score difference with first non-orthologous sequence - L.braziliensis:43 P.jiroveci:43

A4HLJ7              	100.00%		L0PC72              	100.00%
Bootstrap support for A4HLJ7 as seed ortholog is 100%.
Bootstrap support for L0PC72 as seed ortholog is 100%.

Group of orthologs #815. Best score 42 bits
Score difference with first non-orthologous sequence - L.braziliensis:42 P.jiroveci:42

A4HBV5              	100.00%		L0PFB0              	100.00%
Bootstrap support for A4HBV5 as seed ortholog is 100%.
Bootstrap support for L0PFB0 as seed ortholog is 100%.

Group of orthologs #816. Best score 41 bits
Score difference with first non-orthologous sequence - L.braziliensis:41 P.jiroveci:41

A4H4H2              	100.00%		L0PEH3              	100.00%
Bootstrap support for A4H4H2 as seed ortholog is 100%.
Bootstrap support for L0PEH3 as seed ortholog is 100%.

Group of orthologs #817. Best score 41 bits
Score difference with first non-orthologous sequence - L.braziliensis:41 P.jiroveci:41

A4H3W5              	100.00%		L0PFT7              	100.00%
Bootstrap support for A4H3W5 as seed ortholog is 100%.
Bootstrap support for L0PFT7 as seed ortholog is 100%.

Group of orthologs #818. Best score 41 bits
Score difference with first non-orthologous sequence - L.braziliensis:41 P.jiroveci:41

A4HQL3              	100.00%		L0P7N9              	100.00%
Bootstrap support for A4HQL3 as seed ortholog is 100%.
Bootstrap support for L0P7N9 as seed ortholog is 100%.