###################################
379 groups of orthologs
447 in-paralogs from H.salinarum
606 in-paralogs from P.troglodytes
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 652 bits
Score difference with first non-orthologous sequence - H.salinarum:652 P.troglodytes:652

Q9HP43              	100.00%		H2QJC4              	100.00%
                    	       		H2QHM0              	33.68%
Bootstrap support for Q9HP43 as seed ortholog is 100%.
Bootstrap support for H2QJC4 as seed ortholog is 100%.

Group of orthologs #2. Best score 619 bits
Score difference with first non-orthologous sequence - H.salinarum:341 P.troglodytes:360

Q9HPQ0              	100.00%		H2QNF5              	100.00%
Bootstrap support for Q9HPQ0 as seed ortholog is 100%.
Bootstrap support for H2QNF5 as seed ortholog is 100%.

Group of orthologs #3. Best score 615 bits
Score difference with first non-orthologous sequence - H.salinarum:277 P.troglodytes:78

Q9HPU1              	100.00%		H2QX75              	100.00%
Q9HHW2              	43.14%		
Q9HPF0              	17.05%		
Bootstrap support for Q9HPU1 as seed ortholog is 100%.
Bootstrap support for H2QX75 as seed ortholog is 93%.

Group of orthologs #4. Best score 597 bits
Score difference with first non-orthologous sequence - H.salinarum:597 P.troglodytes:106

Q9HRY2              	100.00%		H2QRK8              	100.00%
Bootstrap support for Q9HRY2 as seed ortholog is 100%.
Bootstrap support for H2QRK8 as seed ortholog is 99%.

Group of orthologs #5. Best score 587 bits
Score difference with first non-orthologous sequence - H.salinarum:587 P.troglodytes:231

P0CX02              	100.00%		H2Q251              	100.00%
                    	       		H2R1J6              	8.12%
Bootstrap support for P0CX02 as seed ortholog is 100%.
Bootstrap support for H2Q251 as seed ortholog is 99%.

Group of orthologs #6. Best score 535 bits
Score difference with first non-orthologous sequence - H.salinarum:535 P.troglodytes:387

Q9HNE3              	100.00%		H2QN48              	100.00%
Bootstrap support for Q9HNE3 as seed ortholog is 100%.
Bootstrap support for H2QN48 as seed ortholog is 100%.

Group of orthologs #7. Best score 532 bits
Score difference with first non-orthologous sequence - H.salinarum:532 P.troglodytes:406

Q9HNE4              	100.00%		H2QVT8              	100.00%
                    	       		H2QI31              	68.18%
Bootstrap support for Q9HNE4 as seed ortholog is 100%.
Bootstrap support for H2QVT8 as seed ortholog is 100%.

Group of orthologs #8. Best score 517 bits
Score difference with first non-orthologous sequence - H.salinarum:172 P.troglodytes:172

Q9HQU8              	100.00%		H2QK86              	100.00%
                    	       		H2QK41              	9.94%
Bootstrap support for Q9HQU8 as seed ortholog is 99%.
Bootstrap support for H2QK86 as seed ortholog is 99%.

Group of orthologs #9. Best score 512 bits
Score difference with first non-orthologous sequence - H.salinarum:512 P.troglodytes:512

Q9HP32              	100.00%		H2PYS9              	100.00%
                    	       		H2R3J0              	58.07%
Bootstrap support for Q9HP32 as seed ortholog is 100%.
Bootstrap support for H2PYS9 as seed ortholog is 100%.

Group of orthologs #10. Best score 502 bits
Score difference with first non-orthologous sequence - H.salinarum:502 P.troglodytes:502

P0CX03              	100.00%		H2QPI8              	100.00%
                    	       		H2Q6S4              	14.23%
Bootstrap support for P0CX03 as seed ortholog is 100%.
Bootstrap support for H2QPI8 as seed ortholog is 100%.

Group of orthologs #11. Best score 497 bits
Score difference with first non-orthologous sequence - H.salinarum:497 P.troglodytes:384

Q9HMC1              	100.00%		G2HF28              	100.00%
Bootstrap support for Q9HMC1 as seed ortholog is 100%.
Bootstrap support for G2HF28 as seed ortholog is 100%.

Group of orthologs #12. Best score 485 bits
Score difference with first non-orthologous sequence - H.salinarum:485 P.troglodytes:485

Q9HRZ1              	100.00%		H2QT52              	100.00%
Bootstrap support for Q9HRZ1 as seed ortholog is 100%.
Bootstrap support for H2QT52 as seed ortholog is 100%.

Group of orthologs #13. Best score 470 bits
Score difference with first non-orthologous sequence - H.salinarum:470 P.troglodytes:159

Q9HN97              	100.00%		H2R6L5              	100.00%
Bootstrap support for Q9HN97 as seed ortholog is 100%.
Bootstrap support for H2R6L5 as seed ortholog is 99%.

Group of orthologs #14. Best score 468 bits
Score difference with first non-orthologous sequence - H.salinarum:468 P.troglodytes:359

Q9HN72              	100.00%		H2QMF8              	100.00%
Bootstrap support for Q9HN72 as seed ortholog is 100%.
Bootstrap support for H2QMF8 as seed ortholog is 100%.

Group of orthologs #15. Best score 464 bits
Score difference with first non-orthologous sequence - H.salinarum:172 P.troglodytes:309

Q9HRH2              	100.00%		H2R298              	100.00%
                    	       		H2Q7L5              	42.63%
Bootstrap support for Q9HRH2 as seed ortholog is 99%.
Bootstrap support for H2R298 as seed ortholog is 100%.

Group of orthologs #16. Best score 464 bits
Score difference with first non-orthologous sequence - H.salinarum:327 P.troglodytes:464

Q9HMU3              	100.00%		H2Q2Y0              	100.00%
Bootstrap support for Q9HMU3 as seed ortholog is 100%.
Bootstrap support for H2Q2Y0 as seed ortholog is 100%.

Group of orthologs #17. Best score 440 bits
Score difference with first non-orthologous sequence - H.salinarum:440 P.troglodytes:440

Q9HQ29              	100.00%		H2Q1E9              	100.00%
Bootstrap support for Q9HQ29 as seed ortholog is 100%.
Bootstrap support for H2Q1E9 as seed ortholog is 100%.

Group of orthologs #18. Best score 440 bits
Score difference with first non-orthologous sequence - H.salinarum:440 P.troglodytes:34

Q9HPP8              	100.00%		H2QNT3              	100.00%
Bootstrap support for Q9HPP8 as seed ortholog is 100%.
Bootstrap support for H2QNT3 as seed ortholog is 79%.

Group of orthologs #19. Best score 431 bits
Score difference with first non-orthologous sequence - H.salinarum:431 P.troglodytes:431

Q9HP27              	100.00%		H2QQQ4              	100.00%
                    	       		H2QA60              	61.69%
                    	       		H2PZW8              	32.49%
Bootstrap support for Q9HP27 as seed ortholog is 100%.
Bootstrap support for H2QQQ4 as seed ortholog is 100%.

Group of orthologs #20. Best score 427 bits
Score difference with first non-orthologous sequence - H.salinarum:427 P.troglodytes:138

Q9HM89              	100.00%		Q5R1X2              	100.00%
                    	       		H2RCV2              	99.21%
                    	       		H2QKS5              	9.72%
Bootstrap support for Q9HM89 as seed ortholog is 100%.
Bootstrap support for Q5R1X2 as seed ortholog is 99%.

Group of orthologs #21. Best score 421 bits
Score difference with first non-orthologous sequence - H.salinarum:421 P.troglodytes:164

Q9HNS5              	100.00%		G2HHT4              	100.00%
                    	       		H2R0L8              	83.12%
Bootstrap support for Q9HNS5 as seed ortholog is 100%.
Bootstrap support for G2HHT4 as seed ortholog is 99%.

Group of orthologs #22. Best score 403 bits
Score difference with first non-orthologous sequence - H.salinarum:403 P.troglodytes:403

Q9HQ68              	100.00%		H2QDF5              	100.00%
Bootstrap support for Q9HQ68 as seed ortholog is 100%.
Bootstrap support for H2QDF5 as seed ortholog is 100%.

Group of orthologs #23. Best score 394 bits
Score difference with first non-orthologous sequence - H.salinarum:296 P.troglodytes:394

P33518              	100.00%		Q9T9W1              	100.00%
Bootstrap support for P33518 as seed ortholog is 100%.
Bootstrap support for Q9T9W1 as seed ortholog is 100%.

Group of orthologs #24. Best score 392 bits
Score difference with first non-orthologous sequence - H.salinarum:234 P.troglodytes:392

Q9HQ66              	100.00%		H2R5Q6              	100.00%
Bootstrap support for Q9HQ66 as seed ortholog is 99%.
Bootstrap support for H2R5Q6 as seed ortholog is 100%.

Group of orthologs #25. Best score 388 bits
Score difference with first non-orthologous sequence - H.salinarum:388 P.troglodytes:325

Q9HMW7              	100.00%		H2R5E9              	100.00%
Bootstrap support for Q9HMW7 as seed ortholog is 100%.
Bootstrap support for H2R5E9 as seed ortholog is 100%.

Group of orthologs #26. Best score 379 bits
Score difference with first non-orthologous sequence - H.salinarum:379 P.troglodytes:379

Q9HPR3              	100.00%		H2QVY7              	100.00%
Bootstrap support for Q9HPR3 as seed ortholog is 100%.
Bootstrap support for H2QVY7 as seed ortholog is 100%.

Group of orthologs #27. Best score 366 bits
Score difference with first non-orthologous sequence - H.salinarum:57 P.troglodytes:366

Q9HQG7              	100.00%		H2PZ82              	100.00%
Bootstrap support for Q9HQG7 as seed ortholog is 94%.
Bootstrap support for H2PZ82 as seed ortholog is 100%.

Group of orthologs #28. Best score 365 bits
Score difference with first non-orthologous sequence - H.salinarum:365 P.troglodytes:13

Q9HN70              	100.00%		G2HJ25              	100.00%
Q9HNI0              	31.79%		
Bootstrap support for Q9HN70 as seed ortholog is 100%.
Bootstrap support for G2HJ25 as seed ortholog is 59%.
Alternative seed ortholog is H2QHY8 (13 bits away from this cluster)

Group of orthologs #29. Best score 364 bits
Score difference with first non-orthologous sequence - H.salinarum:364 P.troglodytes:364

Q9HPV7              	100.00%		H2QLJ4              	100.00%
Bootstrap support for Q9HPV7 as seed ortholog is 100%.
Bootstrap support for H2QLJ4 as seed ortholog is 100%.

Group of orthologs #30. Best score 356 bits
Score difference with first non-orthologous sequence - H.salinarum:356 P.troglodytes:356

Q9HQD5              	100.00%		H2R767              	100.00%
Bootstrap support for Q9HQD5 as seed ortholog is 100%.
Bootstrap support for H2R767 as seed ortholog is 100%.

Group of orthologs #31. Best score 350 bits
Score difference with first non-orthologous sequence - H.salinarum:350 P.troglodytes:234

Q9HNK9              	100.00%		H2RAZ2              	100.00%
Bootstrap support for Q9HNK9 as seed ortholog is 100%.
Bootstrap support for H2RAZ2 as seed ortholog is 100%.

Group of orthologs #32. Best score 349 bits
Score difference with first non-orthologous sequence - H.salinarum:349 P.troglodytes:7

Q9HNA5              	100.00%		H2QW49              	100.00%
Bootstrap support for Q9HNA5 as seed ortholog is 100%.
Bootstrap support for H2QW49 as seed ortholog is 55%.
Alternative seed ortholog is H2QNA7 (7 bits away from this cluster)

Group of orthologs #33. Best score 341 bits
Score difference with first non-orthologous sequence - H.salinarum:210 P.troglodytes:190

Q9HMK7              	100.00%		H2QFH5              	100.00%
Bootstrap support for Q9HMK7 as seed ortholog is 100%.
Bootstrap support for H2QFH5 as seed ortholog is 100%.

Group of orthologs #34. Best score 337 bits
Score difference with first non-orthologous sequence - H.salinarum:337 P.troglodytes:94

Q9HM85              	100.00%		H2QF02              	100.00%
                    	       		H2QD78              	10.07%
                    	       		H2Q9Y7              	6.68%
Bootstrap support for Q9HM85 as seed ortholog is 100%.
Bootstrap support for H2QF02 as seed ortholog is 94%.

Group of orthologs #35. Best score 331 bits
Score difference with first non-orthologous sequence - H.salinarum:156 P.troglodytes:45

Q9HRW6              	100.00%		H2Q8S2              	100.00%
Q9HNP9              	35.00%		H2QGB8              	11.44%
Bootstrap support for Q9HRW6 as seed ortholog is 99%.
Bootstrap support for H2Q8S2 as seed ortholog is 91%.

Group of orthologs #36. Best score 329 bits
Score difference with first non-orthologous sequence - H.salinarum:329 P.troglodytes:329

Q9HN78              	100.00%		H2QPC8              	100.00%
Bootstrap support for Q9HN78 as seed ortholog is 100%.
Bootstrap support for H2QPC8 as seed ortholog is 100%.

Group of orthologs #37. Best score 326 bits
Score difference with first non-orthologous sequence - H.salinarum:98 P.troglodytes:70

Q9HRI6              	100.00%		H2Q719              	100.00%
Q9HRB3              	5.18%		
Bootstrap support for Q9HRI6 as seed ortholog is 99%.
Bootstrap support for H2Q719 as seed ortholog is 98%.

Group of orthologs #38. Best score 320 bits
Score difference with first non-orthologous sequence - H.salinarum:320 P.troglodytes:320

Q9HT00              	100.00%		H2R176              	100.00%
                    	       		H2QS64              	66.85%
Bootstrap support for Q9HT00 as seed ortholog is 100%.
Bootstrap support for H2R176 as seed ortholog is 100%.

Group of orthologs #39. Best score 310 bits
Score difference with first non-orthologous sequence - H.salinarum:241 P.troglodytes:140

Q9HN74              	100.00%		H2QV83              	100.00%
Bootstrap support for Q9HN74 as seed ortholog is 100%.
Bootstrap support for H2QV83 as seed ortholog is 99%.

Group of orthologs #40. Best score 309 bits
Score difference with first non-orthologous sequence - H.salinarum:309 P.troglodytes:309

Q9HPY5              	100.00%		H2Q6A8              	100.00%
                    	       		H2QCE4              	44.31%
Bootstrap support for Q9HPY5 as seed ortholog is 100%.
Bootstrap support for H2Q6A8 as seed ortholog is 100%.

Group of orthologs #41. Best score 306 bits
Score difference with first non-orthologous sequence - H.salinarum:306 P.troglodytes:306

Q9HPP0              	100.00%		H2QI84              	100.00%
Bootstrap support for Q9HPP0 as seed ortholog is 100%.
Bootstrap support for H2QI84 as seed ortholog is 100%.

Group of orthologs #42. Best score 306 bits
Score difference with first non-orthologous sequence - H.salinarum:255 P.troglodytes:12

Q9HS95              	100.00%		H2R3G0              	100.00%
Bootstrap support for Q9HS95 as seed ortholog is 100%.
Bootstrap support for H2R3G0 as seed ortholog is 61%.
Alternative seed ortholog is H2R1R2 (12 bits away from this cluster)

Group of orthologs #43. Best score 304 bits
Score difference with first non-orthologous sequence - H.salinarum:304 P.troglodytes:304

Q9HSA5              	100.00%		H2Q9R0              	100.00%
                    	       		H2RBP4              	51.48%
Bootstrap support for Q9HSA5 as seed ortholog is 100%.
Bootstrap support for H2Q9R0 as seed ortholog is 100%.

Group of orthologs #44. Best score 299 bits
Score difference with first non-orthologous sequence - H.salinarum:299 P.troglodytes:299

Q9HMN5              	100.00%		H2Q862              	100.00%
Bootstrap support for Q9HMN5 as seed ortholog is 100%.
Bootstrap support for H2Q862 as seed ortholog is 100%.

Group of orthologs #45. Best score 298 bits
Score difference with first non-orthologous sequence - H.salinarum:298 P.troglodytes:298

Q9HN50              	100.00%		H2QK78              	100.00%
                    	       		H2PZL8              	25.30%
                    	       		H2QVC8              	24.78%
Bootstrap support for Q9HN50 as seed ortholog is 100%.
Bootstrap support for H2QK78 as seed ortholog is 100%.

Group of orthologs #46. Best score 298 bits
Score difference with first non-orthologous sequence - H.salinarum:298 P.troglodytes:198

Q9HR43              	100.00%		H2QTH5              	100.00%
Bootstrap support for Q9HR43 as seed ortholog is 100%.
Bootstrap support for H2QTH5 as seed ortholog is 99%.

Group of orthologs #47. Best score 297 bits
Score difference with first non-orthologous sequence - H.salinarum:297 P.troglodytes:27

Q9HSL6              	100.00%		H2QHW0              	100.00%
Q9HSM2              	24.35%		
Bootstrap support for Q9HSL6 as seed ortholog is 100%.
Bootstrap support for H2QHW0 as seed ortholog is 63%.
Alternative seed ortholog is H2RI28 (27 bits away from this cluster)

Group of orthologs #48. Best score 295 bits
Score difference with first non-orthologous sequence - H.salinarum:295 P.troglodytes:41

Q9HSQ7              	100.00%		H2R647              	100.00%
Bootstrap support for Q9HSQ7 as seed ortholog is 100%.
Bootstrap support for H2R647 as seed ortholog is 80%.

Group of orthologs #49. Best score 293 bits
Score difference with first non-orthologous sequence - H.salinarum:293 P.troglodytes:293

Q9HPS4              	100.00%		H2QPI4              	100.00%
Bootstrap support for Q9HPS4 as seed ortholog is 100%.
Bootstrap support for H2QPI4 as seed ortholog is 100%.

Group of orthologs #50. Best score 281 bits
Score difference with first non-orthologous sequence - H.salinarum:281 P.troglodytes:281

Q9HQM6              	100.00%		H2Q1F7              	100.00%
                    	       		H2Q900              	55.45%
Bootstrap support for Q9HQM6 as seed ortholog is 100%.
Bootstrap support for H2Q1F7 as seed ortholog is 100%.

Group of orthologs #51. Best score 280 bits
Score difference with first non-orthologous sequence - H.salinarum:48 P.troglodytes:28

Q9HMJ6              	100.00%		H2QA58              	100.00%
                    	       		H2Q9I2              	61.74%
                    	       		G2HJM2              	60.03%
                    	       		H2QXA8              	50.26%
                    	       		H2Q6W4              	39.71%
                    	       		H2Q6R9              	24.41%
                    	       		H2QTS3              	7.26%
                    	       		H2Q0I5              	5.94%
Bootstrap support for Q9HMJ6 as seed ortholog is 80%.
Bootstrap support for H2QA58 as seed ortholog is 73%.
Alternative seed ortholog is Q6A2H0 (28 bits away from this cluster)

Group of orthologs #52. Best score 278 bits
Score difference with first non-orthologous sequence - H.salinarum:278 P.troglodytes:50

Q9HMG9              	100.00%		H2QSM5              	100.00%
                    	       		H2RBW3              	29.23%
Bootstrap support for Q9HMG9 as seed ortholog is 100%.
Bootstrap support for H2QSM5 as seed ortholog is 76%.

Group of orthologs #53. Best score 275 bits
Score difference with first non-orthologous sequence - H.salinarum:275 P.troglodytes:107

Q9HMF1              	100.00%		H2QLS4              	100.00%
Bootstrap support for Q9HMF1 as seed ortholog is 100%.
Bootstrap support for H2QLS4 as seed ortholog is 95%.

Group of orthologs #54. Best score 269 bits
Score difference with first non-orthologous sequence - H.salinarum:269 P.troglodytes:269

Q9HRM7              	100.00%		H2Q276              	100.00%
Q9HSM4              	100.00%		Q64HZ8              	100.00%
Q9HQE1              	30.67%		
Bootstrap support for Q9HRM7 as seed ortholog is 100%.
Bootstrap support for Q9HSM4 as seed ortholog is 100%.
Bootstrap support for H2Q276 as seed ortholog is 100%.
Bootstrap support for Q64HZ8 as seed ortholog is 100%.

Group of orthologs #55. Best score 269 bits
Score difference with first non-orthologous sequence - H.salinarum:269 P.troglodytes:269

Q9HMR0              	100.00%		A5A6P1              	100.00%
Bootstrap support for Q9HMR0 as seed ortholog is 100%.
Bootstrap support for A5A6P1 as seed ortholog is 100%.

Group of orthologs #56. Best score 265 bits
Score difference with first non-orthologous sequence - H.salinarum:265 P.troglodytes:17

Q9HNK4              	100.00%		H2QEI6              	100.00%
Bootstrap support for Q9HNK4 as seed ortholog is 100%.
Bootstrap support for H2QEI6 as seed ortholog is 69%.
Alternative seed ortholog is H2QMA8 (17 bits away from this cluster)

Group of orthologs #57. Best score 264 bits
Score difference with first non-orthologous sequence - H.salinarum:264 P.troglodytes:140

Q9HMW5              	100.00%		H2Q884              	100.00%
Bootstrap support for Q9HMW5 as seed ortholog is 100%.
Bootstrap support for H2Q884 as seed ortholog is 99%.

Group of orthologs #58. Best score 263 bits
Score difference with first non-orthologous sequence - H.salinarum:263 P.troglodytes:263

Q9HMK2              	100.00%		H2QBH6              	100.00%
Bootstrap support for Q9HMK2 as seed ortholog is 100%.
Bootstrap support for H2QBH6 as seed ortholog is 100%.

Group of orthologs #59. Best score 261 bits
Score difference with first non-orthologous sequence - H.salinarum:261 P.troglodytes:261

Q9HSA4              	100.00%		H2Q6B5              	100.00%
Bootstrap support for Q9HSA4 as seed ortholog is 100%.
Bootstrap support for H2Q6B5 as seed ortholog is 100%.

Group of orthologs #60. Best score 260 bits
Score difference with first non-orthologous sequence - H.salinarum:260 P.troglodytes:260

P17103              	100.00%		H2QLI6              	100.00%
                    	       		H2QCD9              	21.26%
Bootstrap support for P17103 as seed ortholog is 100%.
Bootstrap support for H2QLI6 as seed ortholog is 100%.

Group of orthologs #61. Best score 259 bits
Score difference with first non-orthologous sequence - H.salinarum:259 P.troglodytes:75

Q9HQU4              	100.00%		H2QVB7              	100.00%
                    	       		H2R178              	66.96%
Bootstrap support for Q9HQU4 as seed ortholog is 100%.
Bootstrap support for H2QVB7 as seed ortholog is 97%.

Group of orthologs #62. Best score 259 bits
Score difference with first non-orthologous sequence - H.salinarum:152 P.troglodytes:21

Q9HN27              	100.00%		H2Q6Z3              	100.00%
Bootstrap support for Q9HN27 as seed ortholog is 100%.
Bootstrap support for H2Q6Z3 as seed ortholog is 73%.
Alternative seed ortholog is H2QUR2 (21 bits away from this cluster)

Group of orthologs #63. Best score 255 bits
Score difference with first non-orthologous sequence - H.salinarum:255 P.troglodytes:255

Q9HMK4              	100.00%		G2HG47              	100.00%
Bootstrap support for Q9HMK4 as seed ortholog is 100%.
Bootstrap support for G2HG47 as seed ortholog is 100%.

Group of orthologs #64. Best score 250 bits
Score difference with first non-orthologous sequence - H.salinarum:250 P.troglodytes:250

Q9HRL9              	100.00%		Q0MQG5              	100.00%
Bootstrap support for Q9HRL9 as seed ortholog is 100%.
Bootstrap support for Q0MQG5 as seed ortholog is 100%.

Group of orthologs #65. Best score 248 bits
Score difference with first non-orthologous sequence - H.salinarum:248 P.troglodytes:73

Q9HN76              	100.00%		H2QTB5              	100.00%
Bootstrap support for Q9HN76 as seed ortholog is 100%.
Bootstrap support for H2QTB5 as seed ortholog is 98%.

Group of orthologs #66. Best score 244 bits
Score difference with first non-orthologous sequence - H.salinarum:244 P.troglodytes:122

Q9HPE4              	100.00%		H2QLP1              	100.00%
                    	       		H2QT30              	19.60%
Bootstrap support for Q9HPE4 as seed ortholog is 100%.
Bootstrap support for H2QLP1 as seed ortholog is 99%.

Group of orthologs #67. Best score 243 bits
Score difference with first non-orthologous sequence - H.salinarum:154 P.troglodytes:243

Q9HQD6              	100.00%		H2Q6N2              	100.00%
Bootstrap support for Q9HQD6 as seed ortholog is 99%.
Bootstrap support for H2Q6N2 as seed ortholog is 100%.

Group of orthologs #68. Best score 243 bits
Score difference with first non-orthologous sequence - H.salinarum:243 P.troglodytes:243

Q9HPP1              	100.00%		H2Q7J7              	100.00%
Bootstrap support for Q9HPP1 as seed ortholog is 100%.
Bootstrap support for H2Q7J7 as seed ortholog is 100%.

Group of orthologs #69. Best score 243 bits
Score difference with first non-orthologous sequence - H.salinarum:243 P.troglodytes:243

Q9HS93              	100.00%		H2QQA1              	100.00%
Bootstrap support for Q9HS93 as seed ortholog is 100%.
Bootstrap support for H2QQA1 as seed ortholog is 100%.

Group of orthologs #70. Best score 242 bits
Score difference with first non-orthologous sequence - H.salinarum:242 P.troglodytes:242

Q9HMZ1              	100.00%		H2QXQ8              	100.00%
Bootstrap support for Q9HMZ1 as seed ortholog is 100%.
Bootstrap support for H2QXQ8 as seed ortholog is 100%.

Group of orthologs #71. Best score 238 bits
Score difference with first non-orthologous sequence - H.salinarum:238 P.troglodytes:238

Q9HPX2              	100.00%		H2QFG3              	100.00%
Bootstrap support for Q9HPX2 as seed ortholog is 100%.
Bootstrap support for H2QFG3 as seed ortholog is 100%.

Group of orthologs #72. Best score 238 bits
Score difference with first non-orthologous sequence - H.salinarum:238 P.troglodytes:165

Q9HST5              	100.00%		H2QKK8              	100.00%
Bootstrap support for Q9HST5 as seed ortholog is 100%.
Bootstrap support for H2QKK8 as seed ortholog is 100%.

Group of orthologs #73. Best score 238 bits
Score difference with first non-orthologous sequence - H.salinarum:172 P.troglodytes:47

Q9HQJ7              	100.00%		H2R457              	100.00%
Bootstrap support for Q9HQJ7 as seed ortholog is 100%.
Bootstrap support for H2R457 as seed ortholog is 92%.

Group of orthologs #74. Best score 234 bits
Score difference with first non-orthologous sequence - H.salinarum:234 P.troglodytes:4

Q9HR85              	100.00%		H2Q8K7              	100.00%
Bootstrap support for Q9HR85 as seed ortholog is 100%.
Bootstrap support for H2Q8K7 as seed ortholog is 54%.
Alternative seed ortholog is H2RGJ4 (4 bits away from this cluster)

Group of orthologs #75. Best score 233 bits
Score difference with first non-orthologous sequence - H.salinarum:233 P.troglodytes:122

Q9HN77              	100.00%		A5A6H9              	100.00%
Q9HNV6              	12.30%		
Bootstrap support for Q9HN77 as seed ortholog is 100%.
Bootstrap support for A5A6H9 as seed ortholog is 99%.

Group of orthologs #76. Best score 229 bits
Score difference with first non-orthologous sequence - H.salinarum:229 P.troglodytes:229

Q9HPB1              	100.00%		H2R7U3              	100.00%
                    	       		H2QNA9              	93.37%
Bootstrap support for Q9HPB1 as seed ortholog is 100%.
Bootstrap support for H2R7U3 as seed ortholog is 100%.

Group of orthologs #77. Best score 229 bits
Score difference with first non-orthologous sequence - H.salinarum:229 P.troglodytes:142

Q9HNL6              	100.00%		H2Q7W2              	100.00%
Bootstrap support for Q9HNL6 as seed ortholog is 100%.
Bootstrap support for H2Q7W2 as seed ortholog is 99%.

Group of orthologs #78. Best score 225 bits
Score difference with first non-orthologous sequence - H.salinarum:225 P.troglodytes:225

Q9HMK3              	100.00%		G2HDY3              	100.00%
Bootstrap support for Q9HMK3 as seed ortholog is 100%.
Bootstrap support for G2HDY3 as seed ortholog is 100%.

Group of orthologs #79. Best score 225 bits
Score difference with first non-orthologous sequence - H.salinarum:225 P.troglodytes:66

Q9HPR8              	100.00%		H2Q1Z5              	100.00%
Bootstrap support for Q9HPR8 as seed ortholog is 100%.
Bootstrap support for H2Q1Z5 as seed ortholog is 85%.

Group of orthologs #80. Best score 225 bits
Score difference with first non-orthologous sequence - H.salinarum:225 P.troglodytes:225

Q9HQL9              	100.00%		H2R5M8              	100.00%
Bootstrap support for Q9HQL9 as seed ortholog is 100%.
Bootstrap support for H2R5M8 as seed ortholog is 100%.

Group of orthologs #81. Best score 221 bits
Score difference with first non-orthologous sequence - H.salinarum:221 P.troglodytes:39

Q9HHN2              	100.00%		H2QTD5              	100.00%
Bootstrap support for Q9HHN2 as seed ortholog is 100%.
Bootstrap support for H2QTD5 as seed ortholog is 76%.

Group of orthologs #82. Best score 221 bits
Score difference with first non-orthologous sequence - H.salinarum:221 P.troglodytes:221

Q9HMQ3              	100.00%		H2RBX6              	100.00%
Bootstrap support for Q9HMQ3 as seed ortholog is 100%.
Bootstrap support for H2RBX6 as seed ortholog is 100%.

Group of orthologs #83. Best score 220 bits
Score difference with first non-orthologous sequence - H.salinarum:220 P.troglodytes:220

Q9HQI9              	100.00%		G2HFA5              	100.00%
                    	       		H2QBZ4              	80.19%
Bootstrap support for Q9HQI9 as seed ortholog is 100%.
Bootstrap support for G2HFA5 as seed ortholog is 100%.

Group of orthologs #84. Best score 220 bits
Score difference with first non-orthologous sequence - H.salinarum:220 P.troglodytes:57

O07683              	100.00%		H2QIS1              	100.00%
Bootstrap support for O07683 as seed ortholog is 100%.
Bootstrap support for H2QIS1 as seed ortholog is 90%.

Group of orthologs #85. Best score 214 bits
Score difference with first non-orthologous sequence - H.salinarum:214 P.troglodytes:214

Q9HPY4              	100.00%		H2QI58              	100.00%
                    	       		H2QPP1              	54.22%
Bootstrap support for Q9HPY4 as seed ortholog is 100%.
Bootstrap support for H2QI58 as seed ortholog is 100%.

Group of orthologs #86. Best score 214 bits
Score difference with first non-orthologous sequence - H.salinarum:214 P.troglodytes:148

Q9HPD1              	100.00%		H2QWY1              	100.00%
Bootstrap support for Q9HPD1 as seed ortholog is 100%.
Bootstrap support for H2QWY1 as seed ortholog is 100%.

Group of orthologs #87. Best score 212 bits
Score difference with first non-orthologous sequence - H.salinarum:212 P.troglodytes:212

Q9HSW5              	100.00%		H2QPC9              	100.00%
Q9HQQ9              	55.61%		
Bootstrap support for Q9HSW5 as seed ortholog is 100%.
Bootstrap support for H2QPC9 as seed ortholog is 100%.

Group of orthologs #88. Best score 212 bits
Score difference with first non-orthologous sequence - H.salinarum:212 P.troglodytes:62

Q9HSM6              	100.00%		H2QU53              	100.00%
Bootstrap support for Q9HSM6 as seed ortholog is 100%.
Bootstrap support for H2QU53 as seed ortholog is 90%.

Group of orthologs #89. Best score 211 bits
Score difference with first non-orthologous sequence - H.salinarum:109 P.troglodytes:100

Q9HMM4              	100.00%		H2Q966              	100.00%
                    	       		H2QLN6              	27.31%
Bootstrap support for Q9HMM4 as seed ortholog is 99%.
Bootstrap support for H2Q966 as seed ortholog is 99%.

Group of orthologs #90. Best score 209 bits
Score difference with first non-orthologous sequence - H.salinarum:83 P.troglodytes:209

Q9HRL3              	100.00%		Q35648              	100.00%
Bootstrap support for Q9HRL3 as seed ortholog is 98%.
Bootstrap support for Q35648 as seed ortholog is 100%.

Group of orthologs #91. Best score 206 bits
Score difference with first non-orthologous sequence - H.salinarum:206 P.troglodytes:78

Q9HR35              	100.00%		H2QGQ5              	100.00%
Bootstrap support for Q9HR35 as seed ortholog is 100%.
Bootstrap support for H2QGQ5 as seed ortholog is 93%.

Group of orthologs #92. Best score 204 bits
Score difference with first non-orthologous sequence - H.salinarum:204 P.troglodytes:204

Q9HNF0              	100.00%		H2QRK7              	100.00%
Bootstrap support for Q9HNF0 as seed ortholog is 100%.
Bootstrap support for H2QRK7 as seed ortholog is 100%.

Group of orthologs #93. Best score 203 bits
Score difference with first non-orthologous sequence - H.salinarum:203 P.troglodytes:91

Q9HNJ8              	100.00%		H2R8T9              	100.00%
Bootstrap support for Q9HNJ8 as seed ortholog is 100%.
Bootstrap support for H2R8T9 as seed ortholog is 97%.

Group of orthologs #94. Best score 202 bits
Score difference with first non-orthologous sequence - H.salinarum:202 P.troglodytes:202

Q9HMQ2              	100.00%		H2QY18              	100.00%
Bootstrap support for Q9HMQ2 as seed ortholog is 100%.
Bootstrap support for H2QY18 as seed ortholog is 100%.

Group of orthologs #95. Best score 201 bits
Score difference with first non-orthologous sequence - H.salinarum:201 P.troglodytes:120

Q9HNK0              	100.00%		H2Q9W1              	100.00%
                    	       		H2QQI4              	100.00%
                    	       		H2R189              	57.31%
                    	       		H2R2B0              	55.50%
                    	       		G2HJ69              	35.12%
                    	       		H2QJI4              	10.18%
                    	       		H2QZ01              	9.03%
Bootstrap support for Q9HNK0 as seed ortholog is 100%.
Bootstrap support for H2Q9W1 as seed ortholog is 99%.
Bootstrap support for H2QQI4 as seed ortholog is 99%.

Group of orthologs #96. Best score 201 bits
Score difference with first non-orthologous sequence - H.salinarum:139 P.troglodytes:19

Q9HQ43              	100.00%		H2QDF1              	100.00%
Bootstrap support for Q9HQ43 as seed ortholog is 99%.
Bootstrap support for H2QDF1 as seed ortholog is 63%.
Alternative seed ortholog is H2QAP6 (19 bits away from this cluster)

Group of orthologs #97. Best score 201 bits
Score difference with first non-orthologous sequence - H.salinarum:71 P.troglodytes:147

Q9HN66              	100.00%		H2R965              	100.00%
Bootstrap support for Q9HN66 as seed ortholog is 96%.
Bootstrap support for H2R965 as seed ortholog is 99%.

Group of orthologs #98. Best score 196 bits
Score difference with first non-orthologous sequence - H.salinarum:196 P.troglodytes:196

Q9HMV6              	100.00%		H2QZF4              	100.00%
Q9HN80              	6.20%		
Bootstrap support for Q9HMV6 as seed ortholog is 100%.
Bootstrap support for H2QZF4 as seed ortholog is 100%.

Group of orthologs #99. Best score 193 bits
Score difference with first non-orthologous sequence - H.salinarum:193 P.troglodytes:109

Q9HRI4              	100.00%		H2QQ04              	100.00%
Bootstrap support for Q9HRI4 as seed ortholog is 100%.
Bootstrap support for H2QQ04 as seed ortholog is 99%.

Group of orthologs #100. Best score 192 bits
Score difference with first non-orthologous sequence - H.salinarum:192 P.troglodytes:192

Q9HNQ2              	100.00%		H2QHX3              	100.00%
Bootstrap support for Q9HNQ2 as seed ortholog is 100%.
Bootstrap support for H2QHX3 as seed ortholog is 100%.

Group of orthologs #101. Best score 192 bits
Score difference with first non-orthologous sequence - H.salinarum:192 P.troglodytes:2

Q9HRY3              	100.00%		H2R2N0              	100.00%
Bootstrap support for Q9HRY3 as seed ortholog is 100%.
Bootstrap support for H2R2N0 as seed ortholog is 67%.
Alternative seed ortholog is H2QB18 (2 bits away from this cluster)

Group of orthologs #102. Best score 191 bits
Score difference with first non-orthologous sequence - H.salinarum:191 P.troglodytes:191

Q9HS90              	100.00%		H2R419              	100.00%
                    	       		H2R4A2              	10.96%
Bootstrap support for Q9HS90 as seed ortholog is 100%.
Bootstrap support for H2R419 as seed ortholog is 100%.

Group of orthologs #103. Best score 190 bits
Score difference with first non-orthologous sequence - H.salinarum:133 P.troglodytes:78

Q9HRZ2              	100.00%		H2Q8H9              	100.00%
                    	       		H2R9A0              	57.69%
                    	       		H2QH50              	22.17%
                    	       		H2QBK1              	5.20%
Bootstrap support for Q9HRZ2 as seed ortholog is 99%.
Bootstrap support for H2Q8H9 as seed ortholog is 97%.

Group of orthologs #104. Best score 190 bits
Score difference with first non-orthologous sequence - H.salinarum:190 P.troglodytes:190

Q9HNZ7              	100.00%		H2Q9W0              	100.00%
                    	       		H2QJU4              	16.45%
                    	       		H2RCA2              	7.68%
Bootstrap support for Q9HNZ7 as seed ortholog is 100%.
Bootstrap support for H2Q9W0 as seed ortholog is 100%.

Group of orthologs #105. Best score 188 bits
Score difference with first non-orthologous sequence - H.salinarum:126 P.troglodytes:70

Q9HNH6              	100.00%		H2QBV2              	100.00%
Bootstrap support for Q9HNH6 as seed ortholog is 99%.
Bootstrap support for H2QBV2 as seed ortholog is 99%.

Group of orthologs #106. Best score 188 bits
Score difference with first non-orthologous sequence - H.salinarum:188 P.troglodytes:61

Q9HP07              	100.00%		H2QSD0              	100.00%
Bootstrap support for Q9HP07 as seed ortholog is 100%.
Bootstrap support for H2QSD0 as seed ortholog is 89%.

Group of orthologs #107. Best score 186 bits
Score difference with first non-orthologous sequence - H.salinarum:186 P.troglodytes:138

Q9HN62              	100.00%		H2PYL0              	100.00%
Bootstrap support for Q9HN62 as seed ortholog is 100%.
Bootstrap support for H2PYL0 as seed ortholog is 99%.

Group of orthologs #108. Best score 184 bits
Score difference with first non-orthologous sequence - H.salinarum:184 P.troglodytes:184

Q9HHN5              	100.00%		H2QQS3              	100.00%
                    	       		H2R6U6              	100.00%
                    	       		H2Q3E9              	37.38%
                    	       		H2PZ19              	33.45%
                    	       		H2QHZ6              	28.22%
                    	       		H2QGN5              	23.46%
Bootstrap support for Q9HHN5 as seed ortholog is 100%.
Bootstrap support for H2QQS3 as seed ortholog is 100%.
Bootstrap support for H2R6U6 as seed ortholog is 100%.

Group of orthologs #109. Best score 184 bits
Score difference with first non-orthologous sequence - H.salinarum:184 P.troglodytes:184

Q9HMI4              	100.00%		H2QIX8              	100.00%
                    	       		H2QUV7              	45.50%
                    	       		H2R3D1              	43.68%
                    	       		H2QU87              	39.34%
Bootstrap support for Q9HMI4 as seed ortholog is 100%.
Bootstrap support for H2QIX8 as seed ortholog is 100%.

Group of orthologs #110. Best score 177 bits
Score difference with first non-orthologous sequence - H.salinarum:177 P.troglodytes:116

Q9HSF7              	100.00%		H2PZC5              	100.00%
Q9HHK5              	69.41%		
Q9HSB3              	47.94%		
Q9HR45              	44.69%		
Q9HRE6              	42.52%		
Q9HHH8              	7.16%		
Q9HNA2              	6.07%		
Bootstrap support for Q9HSF7 as seed ortholog is 100%.
Bootstrap support for H2PZC5 as seed ortholog is 99%.

Group of orthologs #111. Best score 176 bits
Score difference with first non-orthologous sequence - H.salinarum:176 P.troglodytes:176

Q9HQ70              	100.00%		H2QL34              	100.00%
Bootstrap support for Q9HQ70 as seed ortholog is 100%.
Bootstrap support for H2QL34 as seed ortholog is 100%.

Group of orthologs #112. Best score 175 bits
Score difference with first non-orthologous sequence - H.salinarum:70 P.troglodytes:22

Q9HSV1              	100.00%		H2QIH9              	100.00%
Q9HSU9              	14.08%		
Bootstrap support for Q9HSV1 as seed ortholog is 96%.
Bootstrap support for H2QIH9 as seed ortholog is 70%.
Alternative seed ortholog is H2Q7P8 (22 bits away from this cluster)

Group of orthologs #113. Best score 174 bits
Score difference with first non-orthologous sequence - H.salinarum:174 P.troglodytes:174

Q9HQD8              	100.00%		H2R824              	100.00%
Bootstrap support for Q9HQD8 as seed ortholog is 100%.
Bootstrap support for H2R824 as seed ortholog is 100%.

Group of orthologs #114. Best score 174 bits
Score difference with first non-orthologous sequence - H.salinarum:174 P.troglodytes:174

Q9HRM0              	100.00%		Q0MQI0              	100.00%
Bootstrap support for Q9HRM0 as seed ortholog is 100%.
Bootstrap support for Q0MQI0 as seed ortholog is 100%.

Group of orthologs #115. Best score 173 bits
Score difference with first non-orthologous sequence - H.salinarum:173 P.troglodytes:105

Q9HMV8              	100.00%		Q5R1W9              	100.00%
                    	       		H2Q395              	72.95%
                    	       		A5A6N7              	71.93%
                    	       		H2Q396              	69.06%
                    	       		H2Q9I9              	67.42%
                    	       		H2RCW9              	11.48%
Bootstrap support for Q9HMV8 as seed ortholog is 100%.
Bootstrap support for Q5R1W9 as seed ortholog is 99%.

Group of orthologs #116. Best score 173 bits
Score difference with first non-orthologous sequence - H.salinarum:173 P.troglodytes:107

Q9HPA4              	100.00%		H2QZB5              	100.00%
Bootstrap support for Q9HPA4 as seed ortholog is 100%.
Bootstrap support for H2QZB5 as seed ortholog is 99%.

Group of orthologs #117. Best score 172 bits
Score difference with first non-orthologous sequence - H.salinarum:172 P.troglodytes:172

Q9HQZ8              	100.00%		H2PZ17              	100.00%
Q9HRI8              	13.57%		
Bootstrap support for Q9HQZ8 as seed ortholog is 100%.
Bootstrap support for H2PZ17 as seed ortholog is 100%.

Group of orthologs #118. Best score 171 bits
Score difference with first non-orthologous sequence - H.salinarum:171 P.troglodytes:6

P57697              	100.00%		H2QKQ2              	100.00%
                    	       		H2QED5              	77.53%
Bootstrap support for P57697 as seed ortholog is 100%.
Bootstrap support for H2QKQ2 as seed ortholog is 48%.
Alternative seed ortholog is H2R5C6 (6 bits away from this cluster)

Group of orthologs #119. Best score 171 bits
Score difference with first non-orthologous sequence - H.salinarum:171 P.troglodytes:171

Q9HQ61              	100.00%		H2QHK4              	100.00%
                    	       		H2QNW2              	8.64%
Bootstrap support for Q9HQ61 as seed ortholog is 100%.
Bootstrap support for H2QHK4 as seed ortholog is 100%.

Group of orthologs #120. Best score 170 bits
Score difference with first non-orthologous sequence - H.salinarum:170 P.troglodytes:170

Q9HS54              	100.00%		G2HFH0              	100.00%
Bootstrap support for Q9HS54 as seed ortholog is 100%.
Bootstrap support for G2HFH0 as seed ortholog is 100%.

Group of orthologs #121. Best score 169 bits
Score difference with first non-orthologous sequence - H.salinarum:169 P.troglodytes:169

Q9HQH9              	100.00%		H2Q3E3              	100.00%
Bootstrap support for Q9HQH9 as seed ortholog is 100%.
Bootstrap support for H2Q3E3 as seed ortholog is 100%.

Group of orthologs #122. Best score 168 bits
Score difference with first non-orthologous sequence - H.salinarum:168 P.troglodytes:66

Q9HRM6              	100.00%		H2QY00              	100.00%
Q9HRX4              	12.05%		H2PZC7              	33.67%
Q9HQK2              	8.09%		
Bootstrap support for Q9HRM6 as seed ortholog is 100%.
Bootstrap support for H2QY00 as seed ortholog is 93%.

Group of orthologs #123. Best score 168 bits
Score difference with first non-orthologous sequence - H.salinarum:168 P.troglodytes:29

Q9HQR6              	100.00%		H2QIC3              	100.00%
                    	       		H2QIE0              	97.66%
Bootstrap support for Q9HQR6 as seed ortholog is 100%.
Bootstrap support for H2QIC3 as seed ortholog is 82%.

Group of orthologs #124. Best score 167 bits
Score difference with first non-orthologous sequence - H.salinarum:167 P.troglodytes:167

Q9HQC9              	100.00%		H2Q0I7              	100.00%
                    	       		H2R653              	22.22%
Bootstrap support for Q9HQC9 as seed ortholog is 100%.
Bootstrap support for H2Q0I7 as seed ortholog is 100%.

Group of orthologs #125. Best score 167 bits
Score difference with first non-orthologous sequence - H.salinarum:167 P.troglodytes:167

Q9HRL8              	100.00%		Q9T9W3              	100.00%
Bootstrap support for Q9HRL8 as seed ortholog is 100%.
Bootstrap support for Q9T9W3 as seed ortholog is 100%.

Group of orthologs #126. Best score 166 bits
Score difference with first non-orthologous sequence - H.salinarum:166 P.troglodytes:30

Q9HHV3              	100.00%		H2QM83              	100.00%
                    	       		H2R1K8              	52.16%
                    	       		Q5IS68              	38.76%
                    	       		H2Q1R2              	38.32%
Bootstrap support for Q9HHV3 as seed ortholog is 100%.
Bootstrap support for H2QM83 as seed ortholog is 76%.

Group of orthologs #127. Best score 166 bits
Score difference with first non-orthologous sequence - H.salinarum:166 P.troglodytes:166

Q9HN24              	100.00%		H2RA23              	100.00%
                    	       		H2QT37              	35.64%
Bootstrap support for Q9HN24 as seed ortholog is 100%.
Bootstrap support for H2RA23 as seed ortholog is 100%.

Group of orthologs #128. Best score 165 bits
Score difference with first non-orthologous sequence - H.salinarum:165 P.troglodytes:86

P61136              	100.00%		H2QDG2              	100.00%
                    	       		H2Q705              	61.59%
                    	       		H2QAA6              	18.54%
                    	       		H2RAF0              	15.89%
Bootstrap support for P61136 as seed ortholog is 100%.
Bootstrap support for H2QDG2 as seed ortholog is 99%.

Group of orthologs #129. Best score 163 bits
Score difference with first non-orthologous sequence - H.salinarum:163 P.troglodytes:163

Q9HR84              	100.00%		H2R192              	100.00%
Q9HR83              	35.43%		H2PZN0              	32.22%
                    	       		H2Q0Y0              	31.10%
                    	       		H2PZN2              	24.54%
Bootstrap support for Q9HR84 as seed ortholog is 100%.
Bootstrap support for H2R192 as seed ortholog is 100%.

Group of orthologs #130. Best score 162 bits
Score difference with first non-orthologous sequence - H.salinarum:162 P.troglodytes:162

Q9HMN3              	100.00%		H2R4V9              	100.00%
Bootstrap support for Q9HMN3 as seed ortholog is 100%.
Bootstrap support for H2R4V9 as seed ortholog is 100%.

Group of orthologs #131. Best score 161 bits
Score difference with first non-orthologous sequence - H.salinarum:161 P.troglodytes:161

Q9HP36              	100.00%		H2QBN9              	100.00%
Bootstrap support for Q9HP36 as seed ortholog is 100%.
Bootstrap support for H2QBN9 as seed ortholog is 100%.

Group of orthologs #132. Best score 161 bits
Score difference with first non-orthologous sequence - H.salinarum:161 P.troglodytes:161

Q9HN60              	100.00%		H2QEJ5              	100.00%
Bootstrap support for Q9HN60 as seed ortholog is 100%.
Bootstrap support for H2QEJ5 as seed ortholog is 100%.

Group of orthologs #133. Best score 160 bits
Score difference with first non-orthologous sequence - H.salinarum:160 P.troglodytes:160

Q9HQ46              	100.00%		H2Q3H0              	100.00%
Q9HP89              	22.65%		H2Q6S7              	66.04%
Bootstrap support for Q9HQ46 as seed ortholog is 100%.
Bootstrap support for H2Q3H0 as seed ortholog is 100%.

Group of orthologs #134. Best score 160 bits
Score difference with first non-orthologous sequence - H.salinarum:160 P.troglodytes:160

Q9HPD4              	100.00%		H2QAB5              	100.00%
Bootstrap support for Q9HPD4 as seed ortholog is 100%.
Bootstrap support for H2QAB5 as seed ortholog is 100%.

Group of orthologs #135. Best score 159 bits
Score difference with first non-orthologous sequence - H.salinarum:159 P.troglodytes:159

Q9HPJ7              	100.00%		H2QML6              	100.00%
Bootstrap support for Q9HPJ7 as seed ortholog is 100%.
Bootstrap support for H2QML6 as seed ortholog is 100%.

Group of orthologs #136. Best score 159 bits
Score difference with first non-orthologous sequence - H.salinarum:159 P.troglodytes:159

Q9HSA8              	100.00%		H2QX79              	100.00%
Bootstrap support for Q9HSA8 as seed ortholog is 100%.
Bootstrap support for H2QX79 as seed ortholog is 100%.

Group of orthologs #137. Best score 159 bits
Score difference with first non-orthologous sequence - H.salinarum:43 P.troglodytes:16

Q9HQ41              	100.00%		H2R656              	100.00%
Bootstrap support for Q9HQ41 as seed ortholog is 90%.
Bootstrap support for H2R656 as seed ortholog is 70%.
Alternative seed ortholog is H2R3L5 (16 bits away from this cluster)

Group of orthologs #138. Best score 158 bits
Score difference with first non-orthologous sequence - H.salinarum:158 P.troglodytes:104

Q9HS02              	100.00%		H2PYX5              	100.00%
                    	       		H2QVE6              	33.72%
                    	       		H2QVE7              	30.21%
                    	       		H2RD68              	23.39%
                    	       		H2QVG1              	22.03%
                    	       		H2Q1J9              	20.86%
                    	       		H2Q1J8              	19.88%
                    	       		H2Q1K0              	19.30%
                    	       		H2Q1J7              	17.74%
                    	       		H2R7V4              	15.59%
Bootstrap support for Q9HS02 as seed ortholog is 100%.
Bootstrap support for H2PYX5 as seed ortholog is 99%.

Group of orthologs #139. Best score 158 bits
Score difference with first non-orthologous sequence - H.salinarum:93 P.troglodytes:10

Q9HS32              	100.00%		H2PZ16              	100.00%
                    	       		H2QXF9              	34.19%
Bootstrap support for Q9HS32 as seed ortholog is 99%.
Bootstrap support for H2PZ16 as seed ortholog is 63%.
Alternative seed ortholog is H2R120 (10 bits away from this cluster)

Group of orthologs #140. Best score 158 bits
Score difference with first non-orthologous sequence - H.salinarum:158 P.troglodytes:158

Q9HRJ1              	100.00%		H2QQ89              	100.00%
Bootstrap support for Q9HRJ1 as seed ortholog is 100%.
Bootstrap support for H2QQ89 as seed ortholog is 100%.

Group of orthologs #141. Best score 156 bits
Score difference with first non-orthologous sequence - H.salinarum:50 P.troglodytes:156

Q9HHV4              	100.00%		H2QQR4              	100.00%
                    	       		H2QQ06              	13.23%
Bootstrap support for Q9HHV4 as seed ortholog is 85%.
Bootstrap support for H2QQR4 as seed ortholog is 100%.

Group of orthologs #142. Best score 156 bits
Score difference with first non-orthologous sequence - H.salinarum:156 P.troglodytes:156

P0CX01              	100.00%		H2QHB9              	100.00%
Bootstrap support for P0CX01 as seed ortholog is 100%.
Bootstrap support for H2QHB9 as seed ortholog is 100%.

Group of orthologs #143. Best score 156 bits
Score difference with first non-orthologous sequence - H.salinarum:71 P.troglodytes:156

Q9HRL2              	100.00%		P03906              	100.00%
Bootstrap support for Q9HRL2 as seed ortholog is 97%.
Bootstrap support for P03906 as seed ortholog is 100%.

Group of orthologs #144. Best score 155 bits
Score difference with first non-orthologous sequence - H.salinarum:155 P.troglodytes:155

P09737              	100.00%		Q8HXP7              	100.00%
P09224              	74.28%		
Bootstrap support for P09737 as seed ortholog is 100%.
Bootstrap support for Q8HXP7 as seed ortholog is 100%.

Group of orthologs #145. Best score 155 bits
Score difference with first non-orthologous sequence - H.salinarum:155 P.troglodytes:155

Q9HQ65              	100.00%		H2PY56              	100.00%
Bootstrap support for Q9HQ65 as seed ortholog is 100%.
Bootstrap support for H2PY56 as seed ortholog is 100%.

Group of orthologs #146. Best score 155 bits
Score difference with first non-orthologous sequence - H.salinarum:155 P.troglodytes:155

Q9HRM8              	100.00%		H2R0Q3              	100.00%
Bootstrap support for Q9HRM8 as seed ortholog is 100%.
Bootstrap support for H2R0Q3 as seed ortholog is 100%.

Group of orthologs #147. Best score 154 bits
Score difference with first non-orthologous sequence - H.salinarum:154 P.troglodytes:154

Q9HND2              	100.00%		H2Q9V0              	100.00%
Bootstrap support for Q9HND2 as seed ortholog is 100%.
Bootstrap support for H2Q9V0 as seed ortholog is 100%.

Group of orthologs #148. Best score 153 bits
Score difference with first non-orthologous sequence - H.salinarum:153 P.troglodytes:153

Q9HMY5              	100.00%		H2Q4X6              	100.00%
Bootstrap support for Q9HMY5 as seed ortholog is 100%.
Bootstrap support for H2Q4X6 as seed ortholog is 100%.

Group of orthologs #149. Best score 152 bits
Score difference with first non-orthologous sequence - H.salinarum:152 P.troglodytes:152

Q9HRI1              	100.00%		H2QXI2              	100.00%
                    	       		H2QXI1              	72.66%
Bootstrap support for Q9HRI1 as seed ortholog is 100%.
Bootstrap support for H2QXI2 as seed ortholog is 100%.

Group of orthologs #150. Best score 152 bits
Score difference with first non-orthologous sequence - H.salinarum:152 P.troglodytes:1

Q9HN75              	100.00%		H2PZH4              	100.00%
Bootstrap support for Q9HN75 as seed ortholog is 100%.
Bootstrap support for H2PZH4 as seed ortholog is 88%.

Group of orthologs #151. Best score 151 bits
Score difference with first non-orthologous sequence - H.salinarum:151 P.troglodytes:151

Q9HSL2              	100.00%		H2QM70              	100.00%
Bootstrap support for Q9HSL2 as seed ortholog is 100%.
Bootstrap support for H2QM70 as seed ortholog is 100%.

Group of orthologs #152. Best score 150 bits
Score difference with first non-orthologous sequence - H.salinarum:150 P.troglodytes:3

Q9HS37              	100.00%		H2QFN1              	100.00%
                    	       		H2QFN3              	86.76%
                    	       		H2QFM8              	84.50%
                    	       		H2QZI4              	80.19%
                    	       		H2R6B5              	78.58%
                    	       		H2QFM6              	58.56%
                    	       		H2PYZ6              	28.85%
                    	       		H2PYZ5              	28.63%
                    	       		H2R3R0              	25.94%
                    	       		H2PYZ4              	23.47%
                    	       		H2PYZ3              	15.29%
                    	       		H2R9W8              	14.85%
Bootstrap support for Q9HS37 as seed ortholog is 100%.
Bootstrap support for H2QFN1 as seed ortholog is 43%.
Alternative seed ortholog is H2Q8X0 (3 bits away from this cluster)

Group of orthologs #153. Best score 149 bits
Score difference with first non-orthologous sequence - H.salinarum:149 P.troglodytes:149

Q9HN33              	100.00%		H2QIB4              	100.00%
Bootstrap support for Q9HN33 as seed ortholog is 100%.
Bootstrap support for H2QIB4 as seed ortholog is 100%.

Group of orthologs #154. Best score 148 bits
Score difference with first non-orthologous sequence - H.salinarum:148 P.troglodytes:148

Q9HPR4              	100.00%		H2Q893              	100.00%
Bootstrap support for Q9HPR4 as seed ortholog is 100%.
Bootstrap support for H2Q893 as seed ortholog is 100%.

Group of orthologs #155. Best score 147 bits
Score difference with first non-orthologous sequence - H.salinarum:147 P.troglodytes:6

Q9HHU7              	100.00%		H2R731              	100.00%
Q9HSL5              	8.42%		H2QYR9              	30.00%
Q9HQB3              	6.12%		H2QVS9              	28.56%
                    	       		H2Q7D2              	28.29%
                    	       		H2QNQ7              	23.87%
Bootstrap support for Q9HHU7 as seed ortholog is 100%.
Bootstrap support for H2R731 as seed ortholog is 77%.

Group of orthologs #156. Best score 146 bits
Score difference with first non-orthologous sequence - H.salinarum:146 P.troglodytes:146

Q9HMP9              	100.00%		G2HHJ3              	100.00%
Q9HQ08              	5.11%		H2QDL5              	5.63%
Bootstrap support for Q9HMP9 as seed ortholog is 100%.
Bootstrap support for G2HHJ3 as seed ortholog is 100%.

Group of orthologs #157. Best score 146 bits
Score difference with first non-orthologous sequence - H.salinarum:146 P.troglodytes:37

Q9HNW6              	100.00%		G2HDU7              	100.00%
Bootstrap support for Q9HNW6 as seed ortholog is 100%.
Bootstrap support for G2HDU7 as seed ortholog is 86%.

Group of orthologs #158. Best score 145 bits
Score difference with first non-orthologous sequence - H.salinarum:145 P.troglodytes:145

Q9HQD1              	100.00%		A5A6K4              	100.00%
                    	       		H2QT58              	100.00%
                    	       		H2RDH1              	58.94%
Bootstrap support for Q9HQD1 as seed ortholog is 100%.
Bootstrap support for A5A6K4 as seed ortholog is 100%.
Bootstrap support for H2QT58 as seed ortholog is 100%.

Group of orthologs #159. Best score 145 bits
Score difference with first non-orthologous sequence - H.salinarum:145 P.troglodytes:31

Q9HP38              	100.00%		H2PZ89              	100.00%
Bootstrap support for Q9HP38 as seed ortholog is 100%.
Bootstrap support for H2PZ89 as seed ortholog is 77%.

Group of orthologs #160. Best score 145 bits
Score difference with first non-orthologous sequence - H.salinarum:145 P.troglodytes:145

Q9HMU4              	100.00%		H2QWI9              	100.00%
Bootstrap support for Q9HMU4 as seed ortholog is 100%.
Bootstrap support for H2QWI9 as seed ortholog is 100%.

Group of orthologs #161. Best score 144 bits
Score difference with first non-orthologous sequence - H.salinarum:144 P.troglodytes:26

P57705              	100.00%		H2Q0S3              	100.00%
Bootstrap support for P57705 as seed ortholog is 100%.
Bootstrap support for H2Q0S3 as seed ortholog is 66%.
Alternative seed ortholog is H2R3Q5 (26 bits away from this cluster)

Group of orthologs #162. Best score 143 bits
Score difference with first non-orthologous sequence - H.salinarum:143 P.troglodytes:34

Q9HPQ2              	100.00%		H2PZM1              	100.00%
Q9HHR9              	17.71%		H2Q6J9              	64.88%
                    	       		H2R3L2              	27.35%
                    	       		H2QGU3              	23.51%
                    	       		H2QB43              	19.59%
                    	       		H2Q562              	19.22%
                    	       		H2Q561              	18.99%
                    	       		H2QMG0              	18.61%
                    	       		H2R5Q3              	18.16%
                    	       		H2R1V2              	17.71%
                    	       		H2QRS9              	16.50%
                    	       		H2QQL1              	16.43%
                    	       		H2QM23              	14.17%
                    	       		H2Q3A9              	12.89%
                    	       		H2QCL1              	12.43%
                    	       		H2QZ13              	11.76%
                    	       		H2R2E8              	11.76%
Bootstrap support for Q9HPQ2 as seed ortholog is 100%.
Bootstrap support for H2PZM1 as seed ortholog is 67%.
Alternative seed ortholog is H2QM40 (34 bits away from this cluster)

Group of orthologs #163. Best score 143 bits
Score difference with first non-orthologous sequence - H.salinarum:143 P.troglodytes:143

Q9HS43              	100.00%		H2R0X5              	100.00%
Bootstrap support for Q9HS43 as seed ortholog is 100%.
Bootstrap support for H2R0X5 as seed ortholog is 100%.

Group of orthologs #164. Best score 143 bits
Score difference with first non-orthologous sequence - H.salinarum:143 P.troglodytes:143

Q9HP68              	100.00%		H2R9B1              	100.00%
Bootstrap support for Q9HP68 as seed ortholog is 100%.
Bootstrap support for H2R9B1 as seed ortholog is 100%.

Group of orthologs #165. Best score 142 bits
Score difference with first non-orthologous sequence - H.salinarum:142 P.troglodytes:88

P0CX00              	100.00%		H2QR68              	100.00%
Bootstrap support for P0CX00 as seed ortholog is 100%.
Bootstrap support for H2QR68 as seed ortholog is 99%.

Group of orthologs #166. Best score 141 bits
Score difference with first non-orthologous sequence - H.salinarum:141 P.troglodytes:36

Q9HPA7              	100.00%		H2PYL4              	100.00%
Bootstrap support for Q9HPA7 as seed ortholog is 100%.
Bootstrap support for H2PYL4 as seed ortholog is 89%.

Group of orthologs #167. Best score 141 bits
Score difference with first non-orthologous sequence - H.salinarum:141 P.troglodytes:79

Q9HRE8              	100.00%		H2PZH5              	100.00%
Bootstrap support for Q9HRE8 as seed ortholog is 100%.
Bootstrap support for H2PZH5 as seed ortholog is 99%.

Group of orthologs #168. Best score 141 bits
Score difference with first non-orthologous sequence - H.salinarum:141 P.troglodytes:141

Q9HQ27              	100.00%		H2Q3U7              	100.00%
Bootstrap support for Q9HQ27 as seed ortholog is 100%.
Bootstrap support for H2Q3U7 as seed ortholog is 100%.

Group of orthologs #169. Best score 139 bits
Score difference with first non-orthologous sequence - H.salinarum:139 P.troglodytes:139

Q9HPD3              	100.00%		H2Q9N4              	100.00%
Bootstrap support for Q9HPD3 as seed ortholog is 100%.
Bootstrap support for H2Q9N4 as seed ortholog is 100%.

Group of orthologs #170. Best score 139 bits
Score difference with first non-orthologous sequence - H.salinarum:139 P.troglodytes:139

P15010              	100.00%		H2QEU6              	100.00%
Bootstrap support for P15010 as seed ortholog is 100%.
Bootstrap support for H2QEU6 as seed ortholog is 100%.

Group of orthologs #171. Best score 139 bits
Score difference with first non-orthologous sequence - H.salinarum:139 P.troglodytes:7

Q9HPZ3              	100.00%		H2QZL3              	100.00%
Bootstrap support for Q9HPZ3 as seed ortholog is 100%.
Bootstrap support for H2QZL3 as seed ortholog is 63%.
Alternative seed ortholog is H2R7R7 (7 bits away from this cluster)

Group of orthologs #172. Best score 138 bits
Score difference with first non-orthologous sequence - H.salinarum:138 P.troglodytes:138

Q9HPJ0              	100.00%		H2QQU5              	100.00%
                    	       		H2PZT1              	57.88%
Bootstrap support for Q9HPJ0 as seed ortholog is 100%.
Bootstrap support for H2QQU5 as seed ortholog is 100%.

Group of orthologs #173. Best score 138 bits
Score difference with first non-orthologous sequence - H.salinarum:138 P.troglodytes:138

Q9HSK1              	100.00%		H2QGZ5              	100.00%
Bootstrap support for Q9HSK1 as seed ortholog is 100%.
Bootstrap support for H2QGZ5 as seed ortholog is 100%.

Group of orthologs #174. Best score 138 bits
Score difference with first non-orthologous sequence - H.salinarum:138 P.troglodytes:138

Q9HNI2              	100.00%		H2QT92              	100.00%
Bootstrap support for Q9HNI2 as seed ortholog is 100%.
Bootstrap support for H2QT92 as seed ortholog is 100%.

Group of orthologs #175. Best score 136 bits
Score difference with first non-orthologous sequence - H.salinarum:136 P.troglodytes:76

Q9HQJ5              	100.00%		H2QRT3              	100.00%
Bootstrap support for Q9HQJ5 as seed ortholog is 100%.
Bootstrap support for H2QRT3 as seed ortholog is 99%.

Group of orthologs #176. Best score 133 bits
Score difference with first non-orthologous sequence - H.salinarum:133 P.troglodytes:133

Q9HSA2              	100.00%		H2PYR9              	100.00%
Bootstrap support for Q9HSA2 as seed ortholog is 100%.
Bootstrap support for H2PYR9 as seed ortholog is 100%.

Group of orthologs #177. Best score 133 bits
Score difference with first non-orthologous sequence - H.salinarum:133 P.troglodytes:51

Q9HMR2              	100.00%		H2QBI7              	100.00%
Bootstrap support for Q9HMR2 as seed ortholog is 100%.
Bootstrap support for H2QBI7 as seed ortholog is 85%.

Group of orthologs #178. Best score 133 bits
Score difference with first non-orthologous sequence - H.salinarum:133 P.troglodytes:133

P57713              	100.00%		H2QMC2              	100.00%
Bootstrap support for P57713 as seed ortholog is 100%.
Bootstrap support for H2QMC2 as seed ortholog is 100%.

Group of orthologs #179. Best score 132 bits
Score difference with first non-orthologous sequence - H.salinarum:132 P.troglodytes:132

Q9HMC9              	100.00%		H2QKI6              	100.00%
                    	       		H2QC13              	36.29%
                    	       		H2QCH7              	34.70%
                    	       		H2QVA6              	30.88%
                    	       		H2QVF6              	29.66%
Bootstrap support for Q9HMC9 as seed ortholog is 100%.
Bootstrap support for H2QKI6 as seed ortholog is 100%.

Group of orthologs #180. Best score 132 bits
Score difference with first non-orthologous sequence - H.salinarum:29 P.troglodytes:49

Q9HSZ9              	100.00%		H2QMM2              	100.00%
Q9HSZ8              	11.21%		H2QJH1              	11.80%
Bootstrap support for Q9HSZ9 as seed ortholog is 74%.
Alternative seed ortholog is Q9HQQ4 (29 bits away from this cluster)
Bootstrap support for H2QMM2 as seed ortholog is 91%.

Group of orthologs #181. Best score 132 bits
Score difference with first non-orthologous sequence - H.salinarum:132 P.troglodytes:132

Q9HNP5              	100.00%		H2QRM9              	100.00%
                    	       		G2HG51              	69.32%
Bootstrap support for Q9HNP5 as seed ortholog is 100%.
Bootstrap support for H2QRM9 as seed ortholog is 100%.

Group of orthologs #182. Best score 131 bits
Score difference with first non-orthologous sequence - H.salinarum:131 P.troglodytes:35

Q9HS80              	100.00%		Q1WNP0              	100.00%
                    	       		H2QD23              	98.65%
                    	       		H2QFA7              	17.73%
Bootstrap support for Q9HS80 as seed ortholog is 100%.
Bootstrap support for Q1WNP0 as seed ortholog is 84%.

Group of orthologs #183. Best score 131 bits
Score difference with first non-orthologous sequence - H.salinarum:131 P.troglodytes:54

Q9HRF8              	100.00%		H2QLM4              	100.00%
                    	       		H2RI35              	26.13%
Bootstrap support for Q9HRF8 as seed ortholog is 100%.
Bootstrap support for H2QLM4 as seed ortholog is 94%.

Group of orthologs #184. Best score 131 bits
Score difference with first non-orthologous sequence - H.salinarum:131 P.troglodytes:131

Q9HS79              	100.00%		H2QFG6              	100.00%
Bootstrap support for Q9HS79 as seed ortholog is 100%.
Bootstrap support for H2QFG6 as seed ortholog is 100%.

Group of orthologs #185. Best score 130 bits
Score difference with first non-orthologous sequence - H.salinarum:130 P.troglodytes:130

Q9HQK6              	100.00%		H2PZI0              	100.00%
Bootstrap support for Q9HQK6 as seed ortholog is 100%.
Bootstrap support for H2PZI0 as seed ortholog is 100%.

Group of orthologs #186. Best score 128 bits
Score difference with first non-orthologous sequence - H.salinarum:128 P.troglodytes:128

Q9HQG0              	100.00%		H2QVR0              	100.00%
Bootstrap support for Q9HQG0 as seed ortholog is 100%.
Bootstrap support for H2QVR0 as seed ortholog is 100%.

Group of orthologs #187. Best score 127 bits
Score difference with first non-orthologous sequence - H.salinarum:127 P.troglodytes:127

O24787              	100.00%		H2QCT6              	100.00%
Bootstrap support for O24787 as seed ortholog is 100%.
Bootstrap support for H2QCT6 as seed ortholog is 100%.

Group of orthologs #188. Best score 126 bits
Score difference with first non-orthologous sequence - H.salinarum:126 P.troglodytes:126

Q9HPQ4              	100.00%		H2QAJ4              	100.00%
Bootstrap support for Q9HPQ4 as seed ortholog is 100%.
Bootstrap support for H2QAJ4 as seed ortholog is 100%.

Group of orthologs #189. Best score 126 bits
Score difference with first non-orthologous sequence - H.salinarum:126 P.troglodytes:126

Q48296              	100.00%		H2QYG7              	100.00%
Bootstrap support for Q48296 as seed ortholog is 100%.
Bootstrap support for H2QYG7 as seed ortholog is 100%.

Group of orthologs #190. Best score 126 bits
Score difference with first non-orthologous sequence - H.salinarum:62 P.troglodytes:18

Q9HSR4              	100.00%		H2R0C6              	100.00%
Bootstrap support for Q9HSR4 as seed ortholog is 96%.
Bootstrap support for H2R0C6 as seed ortholog is 70%.
Alternative seed ortholog is H2Q8E4 (18 bits away from this cluster)

Group of orthologs #191. Best score 124 bits
Score difference with first non-orthologous sequence - H.salinarum:50 P.troglodytes:124

Q9HMS3              	100.00%		H2QCW3              	100.00%
Q9HSW6              	15.04%		
Q9HHJ7              	8.75%		
Q9HHR1              	7.63%		
Q9HQC7              	7.41%		
Bootstrap support for Q9HMS3 as seed ortholog is 65%.
Alternative seed ortholog is Q9HN34 (50 bits away from this cluster)
Bootstrap support for H2QCW3 as seed ortholog is 100%.

Group of orthologs #192. Best score 124 bits
Score difference with first non-orthologous sequence - H.salinarum:124 P.troglodytes:24

Q9HPH9              	100.00%		H2QC62              	100.00%
Q9HQU7              	51.95%		
Bootstrap support for Q9HPH9 as seed ortholog is 100%.
Bootstrap support for H2QC62 as seed ortholog is 80%.

Group of orthologs #193. Best score 124 bits
Score difference with first non-orthologous sequence - H.salinarum:124 P.troglodytes:71

P13553              	100.00%		H2Q703              	100.00%
Bootstrap support for P13553 as seed ortholog is 100%.
Bootstrap support for H2Q703 as seed ortholog is 99%.

Group of orthologs #194. Best score 122 bits
Score difference with first non-orthologous sequence - H.salinarum:122 P.troglodytes:33

Q9HNZ8              	100.00%		H2Q3V5              	100.00%
                    	       		H2R460              	5.04%
Bootstrap support for Q9HNZ8 as seed ortholog is 100%.
Bootstrap support for H2Q3V5 as seed ortholog is 84%.

Group of orthologs #195. Best score 122 bits
Score difference with first non-orthologous sequence - H.salinarum:122 P.troglodytes:122

Q9HR11              	100.00%		H2QIS6              	100.00%
Bootstrap support for Q9HR11 as seed ortholog is 100%.
Bootstrap support for H2QIS6 as seed ortholog is 100%.

Group of orthologs #196. Best score 121 bits
Score difference with first non-orthologous sequence - H.salinarum:34 P.troglodytes:4

Q9HN44              	100.00%		H2Q9D7              	100.00%
                    	       		H2QK12              	30.84%
                    	       		H2QX18              	24.49%
                    	       		H2Q9M6              	23.70%
Bootstrap support for Q9HN44 as seed ortholog is 89%.
Bootstrap support for H2Q9D7 as seed ortholog is 45%.
Alternative seed ortholog is H2Q8T3 (4 bits away from this cluster)

Group of orthologs #197. Best score 121 bits
Score difference with first non-orthologous sequence - H.salinarum:121 P.troglodytes:121

Q9HMM6              	100.00%		H2QK98              	100.00%
                    	       		H2R5X9              	6.97%
Bootstrap support for Q9HMM6 as seed ortholog is 100%.
Bootstrap support for H2QK98 as seed ortholog is 100%.

Group of orthologs #198. Best score 121 bits
Score difference with first non-orthologous sequence - H.salinarum:121 P.troglodytes:121

Q9HQE0              	100.00%		H2R3N5              	100.00%
Q9HN51              	22.72%		
Bootstrap support for Q9HQE0 as seed ortholog is 100%.
Bootstrap support for H2R3N5 as seed ortholog is 100%.

Group of orthologs #199. Best score 121 bits
Score difference with first non-orthologous sequence - H.salinarum:121 P.troglodytes:121

Q9HNJ6              	100.00%		H2QA99              	100.00%
Bootstrap support for Q9HNJ6 as seed ortholog is 100%.
Bootstrap support for H2QA99 as seed ortholog is 100%.

Group of orthologs #200. Best score 121 bits
Score difference with first non-orthologous sequence - H.salinarum:121 P.troglodytes:121

Q9HN71              	100.00%		H2QAQ4              	100.00%
Bootstrap support for Q9HN71 as seed ortholog is 100%.
Bootstrap support for H2QAQ4 as seed ortholog is 100%.

Group of orthologs #201. Best score 121 bits
Score difference with first non-orthologous sequence - H.salinarum:121 P.troglodytes:121

Q9HRV9              	100.00%		H2QGX7              	100.00%
Bootstrap support for Q9HRV9 as seed ortholog is 100%.
Bootstrap support for H2QGX7 as seed ortholog is 100%.

Group of orthologs #202. Best score 121 bits
Score difference with first non-orthologous sequence - H.salinarum:121 P.troglodytes:121

Q9HPR5              	100.00%		H2QQV5              	100.00%
Bootstrap support for Q9HPR5 as seed ortholog is 100%.
Bootstrap support for H2QQV5 as seed ortholog is 100%.

Group of orthologs #203. Best score 121 bits
Score difference with first non-orthologous sequence - H.salinarum:121 P.troglodytes:121

Q9HN40              	100.00%		H2QU32              	100.00%
Bootstrap support for Q9HN40 as seed ortholog is 100%.
Bootstrap support for H2QU32 as seed ortholog is 100%.

Group of orthologs #204. Best score 119 bits
Score difference with first non-orthologous sequence - H.salinarum:119 P.troglodytes:31

Q9HQH1              	100.00%		H2QQY8              	100.00%
Bootstrap support for Q9HQH1 as seed ortholog is 100%.
Bootstrap support for H2QQY8 as seed ortholog is 83%.

Group of orthologs #205. Best score 117 bits
Score difference with first non-orthologous sequence - H.salinarum:117 P.troglodytes:117

Q9HPN8              	100.00%		H2QQF0              	100.00%
                    	       		H2R0Q0              	64.12%
                    	       		H2QYA0              	41.64%
                    	       		H2QNV6              	8.18%
                    	       		H2QAA1              	7.94%
                    	       		H2PY12              	6.73%
                    	       		H2QVJ5              	6.67%
Bootstrap support for Q9HPN8 as seed ortholog is 100%.
Bootstrap support for H2QQF0 as seed ortholog is 100%.

Group of orthologs #206. Best score 117 bits
Score difference with first non-orthologous sequence - H.salinarum:117 P.troglodytes:117

Q9HR32              	100.00%		H2QKM8              	100.00%
Bootstrap support for Q9HR32 as seed ortholog is 100%.
Bootstrap support for H2QKM8 as seed ortholog is 100%.

Group of orthologs #207. Best score 117 bits
Score difference with first non-orthologous sequence - H.salinarum:117 P.troglodytes:117

Q9HHP2              	100.00%		H2QQT8              	100.00%
Bootstrap support for Q9HHP2 as seed ortholog is 100%.
Bootstrap support for H2QQT8 as seed ortholog is 100%.

Group of orthologs #208. Best score 116 bits
Score difference with first non-orthologous sequence - H.salinarum:116 P.troglodytes:116

Q9HRK1              	100.00%		Q9T9V9              	100.00%
Bootstrap support for Q9HRK1 as seed ortholog is 100%.
Bootstrap support for Q9T9V9 as seed ortholog is 100%.

Group of orthologs #209. Best score 115 bits
Score difference with first non-orthologous sequence - H.salinarum:115 P.troglodytes:45

O52003              	100.00%		H2R3P6              	100.00%
                    	       		H2QQ80              	10.84%
                    	       		H2QFC8              	10.07%
                    	       		H2QC61              	9.50%
                    	       		H2QR99              	9.40%
                    	       		H2PXW2              	9.33%
                    	       		H2Q2A9              	9.30%
                    	       		H2Q1W1              	6.54%
Bootstrap support for O52003 as seed ortholog is 100%.
Bootstrap support for H2R3P6 as seed ortholog is 74%.
Alternative seed ortholog is H2QZE1 (45 bits away from this cluster)

Group of orthologs #210. Best score 115 bits
Score difference with first non-orthologous sequence - H.salinarum:31 P.troglodytes:115

O54523              	100.00%		H2QIK2              	100.00%
Q9HN03              	47.29%		H2QW37              	51.62%
Q9HHS6              	31.69%		
Bootstrap support for O54523 as seed ortholog is 77%.
Bootstrap support for H2QIK2 as seed ortholog is 100%.

Group of orthologs #211. Best score 115 bits
Score difference with first non-orthologous sequence - H.salinarum:115 P.troglodytes:115

Q9HRJ8              	100.00%		H2QCB0              	100.00%
Bootstrap support for Q9HRJ8 as seed ortholog is 100%.
Bootstrap support for H2QCB0 as seed ortholog is 100%.

Group of orthologs #212. Best score 115 bits
Score difference with first non-orthologous sequence - H.salinarum:115 P.troglodytes:115

Q9HQG3              	100.00%		H2QGB6              	100.00%
Bootstrap support for Q9HQG3 as seed ortholog is 100%.
Bootstrap support for H2QGB6 as seed ortholog is 100%.

Group of orthologs #213. Best score 114 bits
Score difference with first non-orthologous sequence - H.salinarum:114 P.troglodytes:114

Q9HHP0              	100.00%		H2QJL7              	100.00%
                    	       		H2QJL8              	95.22%
                    	       		H2QJL9              	61.27%
                    	       		H2PY93              	38.11%
Bootstrap support for Q9HHP0 as seed ortholog is 100%.
Bootstrap support for H2QJL7 as seed ortholog is 100%.

Group of orthologs #214. Best score 114 bits
Score difference with first non-orthologous sequence - H.salinarum:9 P.troglodytes:71

Q9HQD7              	100.00%		H2PY37              	100.00%
Bootstrap support for Q9HQD7 as seed ortholog is 39%.
Alternative seed ortholog is Q9HP79 (9 bits away from this cluster)
Bootstrap support for H2PY37 as seed ortholog is 96%.

Group of orthologs #215. Best score 113 bits
Score difference with first non-orthologous sequence - H.salinarum:113 P.troglodytes:113

Q9HSA3              	100.00%		H2Q220              	100.00%
Bootstrap support for Q9HSA3 as seed ortholog is 100%.
Bootstrap support for H2Q220 as seed ortholog is 100%.

Group of orthologs #216. Best score 111 bits
Score difference with first non-orthologous sequence - H.salinarum:111 P.troglodytes:3

Q9HP11              	100.00%		H2QFI8              	100.00%
Q9HPV9              	5.94%		
Bootstrap support for Q9HP11 as seed ortholog is 100%.
Bootstrap support for H2QFI8 as seed ortholog is 52%.
Alternative seed ortholog is G2HE47 (3 bits away from this cluster)

Group of orthologs #217. Best score 111 bits
Score difference with first non-orthologous sequence - H.salinarum:22 P.troglodytes:111

Q9HSS1              	100.00%		H2RAD3              	100.00%
Bootstrap support for Q9HSS1 as seed ortholog is 63%.
Alternative seed ortholog is Q9HPW9 (22 bits away from this cluster)
Bootstrap support for H2RAD3 as seed ortholog is 100%.

Group of orthologs #218. Best score 110 bits
Score difference with first non-orthologous sequence - H.salinarum:110 P.troglodytes:110

Q9HSS4              	100.00%		H2Q886              	100.00%
                    	       		H2R6C7              	91.25%
Bootstrap support for Q9HSS4 as seed ortholog is 100%.
Bootstrap support for H2Q886 as seed ortholog is 100%.

Group of orthologs #219. Best score 110 bits
Score difference with first non-orthologous sequence - H.salinarum:110 P.troglodytes:110

Q9HPJ8              	100.00%		H2QBK8              	100.00%
Bootstrap support for Q9HPJ8 as seed ortholog is 100%.
Bootstrap support for H2QBK8 as seed ortholog is 100%.

Group of orthologs #220. Best score 110 bits
Score difference with first non-orthologous sequence - H.salinarum:110 P.troglodytes:110

Q9HR56              	100.00%		H2QBU9              	100.00%
Bootstrap support for Q9HR56 as seed ortholog is 100%.
Bootstrap support for H2QBU9 as seed ortholog is 100%.

Group of orthologs #221. Best score 109 bits
Score difference with first non-orthologous sequence - H.salinarum:109 P.troglodytes:109

Q9HS19              	100.00%		H2Q0Q9              	100.00%
Bootstrap support for Q9HS19 as seed ortholog is 100%.
Bootstrap support for H2Q0Q9 as seed ortholog is 100%.

Group of orthologs #222. Best score 109 bits
Score difference with first non-orthologous sequence - H.salinarum:109 P.troglodytes:109

Q9HP03              	100.00%		H2Q6M7              	100.00%
Bootstrap support for Q9HP03 as seed ortholog is 100%.
Bootstrap support for H2Q6M7 as seed ortholog is 100%.

Group of orthologs #223. Best score 109 bits
Score difference with first non-orthologous sequence - H.salinarum:109 P.troglodytes:109

Q9HS60              	100.00%		H2Q945              	100.00%
Bootstrap support for Q9HS60 as seed ortholog is 100%.
Bootstrap support for H2Q945 as seed ortholog is 100%.

Group of orthologs #224. Best score 109 bits
Score difference with first non-orthologous sequence - H.salinarum:109 P.troglodytes:109

Q9HNH7              	100.00%		H2QWH5              	100.00%
Bootstrap support for Q9HNH7 as seed ortholog is 100%.
Bootstrap support for H2QWH5 as seed ortholog is 100%.

Group of orthologs #225. Best score 108 bits
Score difference with first non-orthologous sequence - H.salinarum:108 P.troglodytes:7

Q9HMB6              	100.00%		H2QPX4              	100.00%
                    	       		H2QPX5              	58.07%
                    	       		H2QPX7              	54.30%
                    	       		Q5R1W2              	54.30%
                    	       		H2QPX6              	51.58%
Bootstrap support for Q9HMB6 as seed ortholog is 100%.
Bootstrap support for H2QPX4 as seed ortholog is 56%.
Alternative seed ortholog is H2Q9C4 (7 bits away from this cluster)

Group of orthologs #226. Best score 108 bits
Score difference with first non-orthologous sequence - H.salinarum:108 P.troglodytes:26

Q9HR16              	100.00%		H2QFS1              	100.00%
                    	       		H2Q6P8              	40.10%
                    	       		H2Q3B6              	36.33%
                    	       		H2QHL8              	28.53%
Bootstrap support for Q9HR16 as seed ortholog is 100%.
Bootstrap support for H2QFS1 as seed ortholog is 68%.
Alternative seed ortholog is H2QII0 (26 bits away from this cluster)

Group of orthologs #227. Best score 106 bits
Score difference with first non-orthologous sequence - H.salinarum:106 P.troglodytes:106

Q9HMH9              	100.00%		H2QWJ9              	100.00%
                    	       		H2QVX6              	52.03%
                    	       		H2RC76              	51.82%
                    	       		H2RDF9              	51.20%
                    	       		H2Q2S9              	48.80%
                    	       		H2R8X1              	47.66%
Bootstrap support for Q9HMH9 as seed ortholog is 100%.
Bootstrap support for H2QWJ9 as seed ortholog is 100%.

Group of orthologs #228. Best score 106 bits
Score difference with first non-orthologous sequence - H.salinarum:106 P.troglodytes:106

Q9HPB9              	100.00%		H2QAN1              	100.00%
Bootstrap support for Q9HPB9 as seed ortholog is 100%.
Bootstrap support for H2QAN1 as seed ortholog is 100%.

Group of orthologs #229. Best score 105 bits
Score difference with first non-orthologous sequence - H.salinarum:105 P.troglodytes:105

Q9HND8              	100.00%		H2R9Q4              	100.00%
                    	       		H2QVG4              	59.31%
                    	       		H2Q764              	48.97%
                    	       		H2Q498              	40.75%
Bootstrap support for Q9HND8 as seed ortholog is 100%.
Bootstrap support for H2R9Q4 as seed ortholog is 100%.

Group of orthologs #230. Best score 105 bits
Score difference with first non-orthologous sequence - H.salinarum:43 P.troglodytes:105

Q9HMT7              	100.00%		H2QLL2              	100.00%
                    	       		H2QLL3              	54.81%
Bootstrap support for Q9HMT7 as seed ortholog is 91%.
Bootstrap support for H2QLL2 as seed ortholog is 100%.

Group of orthologs #231. Best score 104 bits
Score difference with first non-orthologous sequence - H.salinarum:104 P.troglodytes:104

Q9HSG5              	100.00%		H2QV72              	100.00%
                    	       		H2R7C1              	9.66%
Bootstrap support for Q9HSG5 as seed ortholog is 100%.
Bootstrap support for H2QV72 as seed ortholog is 100%.

Group of orthologs #232. Best score 103 bits
Score difference with first non-orthologous sequence - H.salinarum:103 P.troglodytes:103

Q9HSH6              	100.00%		H2QW20              	100.00%
                    	       		H2Q2P9              	33.53%
                    	       		H2QI71              	22.27%
Bootstrap support for Q9HSH6 as seed ortholog is 100%.
Bootstrap support for H2QW20 as seed ortholog is 100%.

Group of orthologs #233. Best score 103 bits
Score difference with first non-orthologous sequence - H.salinarum:103 P.troglodytes:103

Q9HNS4              	100.00%		H2R361              	100.00%
Bootstrap support for Q9HNS4 as seed ortholog is 100%.
Bootstrap support for H2R361 as seed ortholog is 100%.

Group of orthologs #234. Best score 102 bits
Score difference with first non-orthologous sequence - H.salinarum:102 P.troglodytes:102

P15009              	100.00%		H2QNU6              	100.00%
Bootstrap support for P15009 as seed ortholog is 100%.
Bootstrap support for H2QNU6 as seed ortholog is 100%.

Group of orthologs #235. Best score 101 bits
Score difference with first non-orthologous sequence - H.salinarum:101 P.troglodytes:101

Q9HPB8              	100.00%		H2RIL3              	100.00%
Bootstrap support for Q9HPB8 as seed ortholog is 100%.
Bootstrap support for H2RIL3 as seed ortholog is 100%.

Group of orthologs #236. Best score 99 bits
Score difference with first non-orthologous sequence - H.salinarum:99 P.troglodytes:99

Q9HMK5              	100.00%		H2QKA9              	100.00%
Q9HPP4              	54.69%		
Q9HSK2              	7.18%		
Bootstrap support for Q9HMK5 as seed ortholog is 100%.
Bootstrap support for H2QKA9 as seed ortholog is 100%.

Group of orthologs #237. Best score 99 bits
Score difference with first non-orthologous sequence - H.salinarum:99 P.troglodytes:30

Q9HQI3              	100.00%		H2Q1R4              	100.00%
Q9HND0              	6.07%		
Bootstrap support for Q9HQI3 as seed ortholog is 100%.
Bootstrap support for H2Q1R4 as seed ortholog is 80%.

Group of orthologs #238. Best score 99 bits
Score difference with first non-orthologous sequence - H.salinarum:99 P.troglodytes:99

Q9HMM2              	100.00%		H2QWP4              	100.00%
Bootstrap support for Q9HMM2 as seed ortholog is 100%.
Bootstrap support for H2QWP4 as seed ortholog is 100%.

Group of orthologs #239. Best score 99 bits
Score difference with first non-orthologous sequence - H.salinarum:99 P.troglodytes:99

Q9V2W4              	100.00%		H2RE42              	100.00%
Bootstrap support for Q9V2W4 as seed ortholog is 100%.
Bootstrap support for H2RE42 as seed ortholog is 100%.

Group of orthologs #240. Best score 98 bits
Score difference with first non-orthologous sequence - H.salinarum:98 P.troglodytes:98

O51976              	100.00%		H2R0W0              	100.00%
Q9HRI0              	12.44%		
Bootstrap support for O51976 as seed ortholog is 100%.
Bootstrap support for H2R0W0 as seed ortholog is 100%.

Group of orthologs #241. Best score 97 bits
Score difference with first non-orthologous sequence - H.salinarum:97 P.troglodytes:97

P61414              	100.00%		H2QDK5              	100.00%
Bootstrap support for P61414 as seed ortholog is 100%.
Bootstrap support for H2QDK5 as seed ortholog is 100%.

Group of orthologs #242. Best score 97 bits
Score difference with first non-orthologous sequence - H.salinarum:97 P.troglodytes:97

Q9HPQ9              	100.00%		H2QDZ3              	100.00%
Bootstrap support for Q9HPQ9 as seed ortholog is 100%.
Bootstrap support for H2QDZ3 as seed ortholog is 100%.

Group of orthologs #243. Best score 97 bits
Score difference with first non-orthologous sequence - H.salinarum:97 P.troglodytes:97

Q9HRL7              	100.00%		Q0MQI3              	100.00%
Bootstrap support for Q9HRL7 as seed ortholog is 100%.
Bootstrap support for Q0MQI3 as seed ortholog is 100%.

Group of orthologs #244. Best score 96 bits
Score difference with first non-orthologous sequence - H.salinarum:96 P.troglodytes:96

Q9HN88              	100.00%		H2QYZ4              	100.00%
                    	       		H2QYA6              	82.18%
                    	       		H2QCE9              	33.58%
                    	       		H2QDX9              	23.64%
Bootstrap support for Q9HN88 as seed ortholog is 100%.
Bootstrap support for H2QYZ4 as seed ortholog is 100%.

Group of orthologs #245. Best score 96 bits
Score difference with first non-orthologous sequence - H.salinarum:96 P.troglodytes:96

Q9HPC2              	100.00%		Q6GVM7              	100.00%
                    	       		Q861U9              	100.00%
                    	       		H2QYT0              	93.86%
                    	       		H2RB54              	91.36%
Bootstrap support for Q9HPC2 as seed ortholog is 100%.
Bootstrap support for Q6GVM7 as seed ortholog is 100%.
Bootstrap support for Q861U9 as seed ortholog is 100%.

Group of orthologs #246. Best score 96 bits
Score difference with first non-orthologous sequence - H.salinarum:96 P.troglodytes:96

P15008              	100.00%		H2QEI4              	100.00%
Bootstrap support for P15008 as seed ortholog is 100%.
Bootstrap support for H2QEI4 as seed ortholog is 100%.

Group of orthologs #247. Best score 96 bits
Score difference with first non-orthologous sequence - H.salinarum:96 P.troglodytes:50

Q9HQJ6              	100.00%		H2QH38              	100.00%
Bootstrap support for Q9HQJ6 as seed ortholog is 100%.
Bootstrap support for H2QH38 as seed ortholog is 98%.

Group of orthologs #248. Best score 96 bits
Score difference with first non-orthologous sequence - H.salinarum:96 P.troglodytes:96

Q9HMG5              	100.00%		H2RF90              	100.00%
Bootstrap support for Q9HMG5 as seed ortholog is 100%.
Bootstrap support for H2RF90 as seed ortholog is 100%.

Group of orthologs #249. Best score 94 bits
Score difference with first non-orthologous sequence - H.salinarum:94 P.troglodytes:27

Q9HSP7              	100.00%		H2RGL2              	100.00%
                    	       		H2R700              	87.08%
                    	       		H2QRN6              	51.79%
Bootstrap support for Q9HSP7 as seed ortholog is 100%.
Bootstrap support for H2RGL2 as seed ortholog is 78%.

Group of orthologs #250. Best score 94 bits
Score difference with first non-orthologous sequence - H.salinarum:94 P.troglodytes:5

Q9HR36              	100.00%		H2QSR8              	100.00%
                    	       		H2Q800              	31.79%
Bootstrap support for Q9HR36 as seed ortholog is 100%.
Bootstrap support for H2QSR8 as seed ortholog is 56%.
Alternative seed ortholog is H2QXV4 (5 bits away from this cluster)

Group of orthologs #251. Best score 94 bits
Score difference with first non-orthologous sequence - H.salinarum:94 P.troglodytes:94

Q9HQK5              	100.00%		H2Q8F0              	100.00%
Bootstrap support for Q9HQK5 as seed ortholog is 100%.
Bootstrap support for H2Q8F0 as seed ortholog is 100%.

Group of orthologs #252. Best score 94 bits
Score difference with first non-orthologous sequence - H.salinarum:94 P.troglodytes:94

Q9HPB6              	100.00%		H2QCU0              	100.00%
Bootstrap support for Q9HPB6 as seed ortholog is 100%.
Bootstrap support for H2QCU0 as seed ortholog is 100%.

Group of orthologs #253. Best score 94 bits
Score difference with first non-orthologous sequence - H.salinarum:94 P.troglodytes:94

Q9HNL8              	100.00%		H2QJV6              	100.00%
Bootstrap support for Q9HNL8 as seed ortholog is 100%.
Bootstrap support for H2QJV6 as seed ortholog is 100%.

Group of orthologs #254. Best score 94 bits
Score difference with first non-orthologous sequence - H.salinarum:94 P.troglodytes:94

Q9HQN6              	100.00%		H2R9I2              	100.00%
Bootstrap support for Q9HQN6 as seed ortholog is 100%.
Bootstrap support for H2R9I2 as seed ortholog is 100%.

Group of orthologs #255. Best score 93 bits
Score difference with first non-orthologous sequence - H.salinarum:93 P.troglodytes:93

O24786              	100.00%		H2RGK0              	100.00%
Bootstrap support for O24786 as seed ortholog is 100%.
Bootstrap support for H2RGK0 as seed ortholog is 100%.

Group of orthologs #256. Best score 92 bits
Score difference with first non-orthologous sequence - H.salinarum:92 P.troglodytes:92

Q9HR24              	100.00%		H2PY87              	100.00%
Bootstrap support for Q9HR24 as seed ortholog is 100%.
Bootstrap support for H2PY87 as seed ortholog is 100%.

Group of orthologs #257. Best score 91 bits
Score difference with first non-orthologous sequence - H.salinarum:91 P.troglodytes:17

Q9HPP2              	100.00%		H2QP94              	100.00%
Bootstrap support for Q9HPP2 as seed ortholog is 100%.
Bootstrap support for H2QP94 as seed ortholog is 68%.
Alternative seed ortholog is H2QSS7 (17 bits away from this cluster)

Group of orthologs #258. Best score 90 bits
Score difference with first non-orthologous sequence - H.salinarum:90 P.troglodytes:14

Q9HRX7              	100.00%		H2QUP2              	100.00%
Bootstrap support for Q9HRX7 as seed ortholog is 100%.
Bootstrap support for H2QUP2 as seed ortholog is 65%.
Alternative seed ortholog is H2QMZ2 (14 bits away from this cluster)

Group of orthologs #259. Best score 89 bits
Score difference with first non-orthologous sequence - H.salinarum:89 P.troglodytes:89

Q9HQJ4              	100.00%		H2QB71              	100.00%
Bootstrap support for Q9HQJ4 as seed ortholog is 100%.
Bootstrap support for H2QB71 as seed ortholog is 100%.

Group of orthologs #260. Best score 89 bits
Score difference with first non-orthologous sequence - H.salinarum:89 P.troglodytes:89

Q9HS81              	100.00%		H2QE14              	100.00%
Bootstrap support for Q9HS81 as seed ortholog is 100%.
Bootstrap support for H2QE14 as seed ortholog is 100%.

Group of orthologs #261. Best score 89 bits
Score difference with first non-orthologous sequence - H.salinarum:89 P.troglodytes:89

Q9HQ94              	100.00%		H2QM07              	100.00%
Bootstrap support for Q9HQ94 as seed ortholog is 100%.
Bootstrap support for H2QM07 as seed ortholog is 100%.

Group of orthologs #262. Best score 88 bits
Score difference with first non-orthologous sequence - H.salinarum:88 P.troglodytes:88

O54647              	100.00%		H2QGH6              	100.00%
Q9HS22              	22.38%		
O54661              	21.68%		
Bootstrap support for O54647 as seed ortholog is 100%.
Bootstrap support for H2QGH6 as seed ortholog is 100%.

Group of orthologs #263. Best score 87 bits
Score difference with first non-orthologous sequence - H.salinarum:87 P.troglodytes:17

Q9HN30              	100.00%		H2PZ62              	100.00%
                    	       		H2QXB7              	67.97%
Bootstrap support for Q9HN30 as seed ortholog is 100%.
Bootstrap support for H2PZ62 as seed ortholog is 63%.
Alternative seed ortholog is H2Q4E1 (17 bits away from this cluster)

Group of orthologs #264. Best score 87 bits
Score difference with first non-orthologous sequence - H.salinarum:87 P.troglodytes:87

Q9HRX2              	100.00%		G2HGE5              	100.00%
Q9HP92              	33.24%		
Bootstrap support for Q9HRX2 as seed ortholog is 100%.
Bootstrap support for G2HGE5 as seed ortholog is 100%.

Group of orthologs #265. Best score 87 bits
Score difference with first non-orthologous sequence - H.salinarum:87 P.troglodytes:18

Q9HQI6              	100.00%		H2Q6U7              	100.00%
Bootstrap support for Q9HQI6 as seed ortholog is 100%.
Bootstrap support for H2Q6U7 as seed ortholog is 54%.
Alternative seed ortholog is H2QDW0 (18 bits away from this cluster)

Group of orthologs #266. Best score 86 bits
Score difference with first non-orthologous sequence - H.salinarum:86 P.troglodytes:86

Q9HRI5              	100.00%		H2QVR6              	100.00%
Bootstrap support for Q9HRI5 as seed ortholog is 100%.
Bootstrap support for H2QVR6 as seed ortholog is 100%.

Group of orthologs #267. Best score 85 bits
Score difference with first non-orthologous sequence - H.salinarum:85 P.troglodytes:85

Q9HRQ4              	100.00%		H2QBQ1              	100.00%
Bootstrap support for Q9HRQ4 as seed ortholog is 100%.
Bootstrap support for H2QBQ1 as seed ortholog is 100%.

Group of orthologs #268. Best score 84 bits
Score difference with first non-orthologous sequence - H.salinarum:84 P.troglodytes:84

P50562              	100.00%		H2PZE6              	100.00%
Bootstrap support for P50562 as seed ortholog is 100%.
Bootstrap support for H2PZE6 as seed ortholog is 100%.

Group of orthologs #269. Best score 84 bits
Score difference with first non-orthologous sequence - H.salinarum:84 P.troglodytes:40

Q9HS15              	100.00%		H2Q8V8              	100.00%
Bootstrap support for Q9HS15 as seed ortholog is 100%.
Bootstrap support for H2Q8V8 as seed ortholog is 97%.

Group of orthologs #270. Best score 84 bits
Score difference with first non-orthologous sequence - H.salinarum:84 P.troglodytes:84

Q9HRJ9              	100.00%		P50690              	100.00%
Bootstrap support for Q9HRJ9 as seed ortholog is 100%.
Bootstrap support for P50690 as seed ortholog is 100%.

Group of orthologs #271. Best score 83 bits
Score difference with first non-orthologous sequence - H.salinarum:83 P.troglodytes:83

Q9HR41              	100.00%		H2QLX6              	100.00%
Bootstrap support for Q9HR41 as seed ortholog is 100%.
Bootstrap support for H2QLX6 as seed ortholog is 100%.

Group of orthologs #272. Best score 82 bits
Score difference with first non-orthologous sequence - H.salinarum:82 P.troglodytes:82

Q9HMZ9              	100.00%		H2PYP8              	100.00%
Bootstrap support for Q9HMZ9 as seed ortholog is 100%.
Bootstrap support for H2PYP8 as seed ortholog is 100%.

Group of orthologs #273. Best score 82 bits
Score difference with first non-orthologous sequence - H.salinarum:82 P.troglodytes:82

Q9HPN7              	100.00%		H2Q6U6              	100.00%
Bootstrap support for Q9HPN7 as seed ortholog is 100%.
Bootstrap support for H2Q6U6 as seed ortholog is 100%.

Group of orthologs #274. Best score 81 bits
Score difference with first non-orthologous sequence - H.salinarum:81 P.troglodytes:81

Q9HMR6              	100.00%		H2QJR0              	100.00%
Bootstrap support for Q9HMR6 as seed ortholog is 100%.
Bootstrap support for H2QJR0 as seed ortholog is 100%.

Group of orthologs #275. Best score 81 bits
Score difference with first non-orthologous sequence - H.salinarum:81 P.troglodytes:81

Q9HRZ3              	100.00%		H2QI34              	100.00%
Bootstrap support for Q9HRZ3 as seed ortholog is 100%.
Bootstrap support for H2QI34 as seed ortholog is 100%.

Group of orthologs #276. Best score 81 bits
Score difference with first non-orthologous sequence - H.salinarum:81 P.troglodytes:81

Q9HP48              	100.00%		H2QLA2              	100.00%
Bootstrap support for Q9HP48 as seed ortholog is 100%.
Bootstrap support for H2QLA2 as seed ortholog is 100%.

Group of orthologs #277. Best score 81 bits
Score difference with first non-orthologous sequence - H.salinarum:81 P.troglodytes:81

Q9HQH3              	100.00%		H2QKW2              	100.00%
Bootstrap support for Q9HQH3 as seed ortholog is 100%.
Bootstrap support for H2QKW2 as seed ortholog is 100%.

Group of orthologs #278. Best score 80 bits
Score difference with first non-orthologous sequence - H.salinarum:80 P.troglodytes:80

P48854              	100.00%		H2QW67              	100.00%
Bootstrap support for P48854 as seed ortholog is 100%.
Bootstrap support for H2QW67 as seed ortholog is 100%.

Group of orthologs #279. Best score 79 bits
Score difference with first non-orthologous sequence - H.salinarum:79 P.troglodytes:79

Q9HS33              	100.00%		H2Q2M8              	100.00%
                    	       		H2R9W1              	62.61%
                    	       		H2Q1W2              	27.78%
Bootstrap support for Q9HS33 as seed ortholog is 100%.
Bootstrap support for H2Q2M8 as seed ortholog is 100%.

Group of orthologs #280. Best score 79 bits
Score difference with first non-orthologous sequence - H.salinarum:79 P.troglodytes:79

Q06842              	100.00%		H2QFM7              	100.00%
                    	       		H2RBZ6              	44.78%
Bootstrap support for Q06842 as seed ortholog is 100%.
Bootstrap support for H2QFM7 as seed ortholog is 100%.

Group of orthologs #281. Best score 78 bits
Score difference with first non-orthologous sequence - H.salinarum:78 P.troglodytes:78

Q9HMF2              	100.00%		A8T644              	100.00%
Bootstrap support for Q9HMF2 as seed ortholog is 100%.
Bootstrap support for A8T644 as seed ortholog is 100%.

Group of orthologs #282. Best score 78 bits
Score difference with first non-orthologous sequence - H.salinarum:78 P.troglodytes:78

Q9HNX7              	100.00%		H2PXU3              	100.00%
Bootstrap support for Q9HNX7 as seed ortholog is 100%.
Bootstrap support for H2PXU3 as seed ortholog is 100%.

Group of orthologs #283. Best score 77 bits
Score difference with first non-orthologous sequence - H.salinarum:77 P.troglodytes:28

Q9HRF6              	100.00%		G2HFR0              	100.00%
Q9HQC0              	9.77%		H2QLR7              	8.69%
Bootstrap support for Q9HRF6 as seed ortholog is 100%.
Bootstrap support for G2HFR0 as seed ortholog is 79%.

Group of orthologs #284. Best score 77 bits
Score difference with first non-orthologous sequence - H.salinarum:77 P.troglodytes:77

Q9HSE2              	100.00%		H2Q494              	100.00%
Bootstrap support for Q9HSE2 as seed ortholog is 100%.
Bootstrap support for H2Q494 as seed ortholog is 100%.

Group of orthologs #285. Best score 77 bits
Score difference with first non-orthologous sequence - H.salinarum:77 P.troglodytes:77

Q9HNE7              	100.00%		H2Q8H3              	100.00%
Bootstrap support for Q9HNE7 as seed ortholog is 100%.
Bootstrap support for H2Q8H3 as seed ortholog is 100%.

Group of orthologs #286. Best score 77 bits
Score difference with first non-orthologous sequence - H.salinarum:77 P.troglodytes:77

Q9HNP2              	100.00%		H2QGF0              	100.00%
Bootstrap support for Q9HNP2 as seed ortholog is 100%.
Bootstrap support for H2QGF0 as seed ortholog is 100%.

Group of orthologs #287. Best score 76 bits
Score difference with first non-orthologous sequence - H.salinarum:76 P.troglodytes:76

Q9HMS7              	100.00%		H2RBV0              	100.00%
Q9HRF7              	16.38%		H2QCF5              	42.53%
Q9HRF2              	9.70%		
Q9HN79              	7.65%		
Bootstrap support for Q9HMS7 as seed ortholog is 100%.
Bootstrap support for H2RBV0 as seed ortholog is 100%.

Group of orthologs #288. Best score 76 bits
Score difference with first non-orthologous sequence - H.salinarum:76 P.troglodytes:76

Q9HS99              	100.00%		H2Q1Z2              	100.00%
Q9HHG6              	10.90%		
Bootstrap support for Q9HS99 as seed ortholog is 100%.
Bootstrap support for H2Q1Z2 as seed ortholog is 100%.

Group of orthologs #289. Best score 76 bits
Score difference with first non-orthologous sequence - H.salinarum:76 P.troglodytes:76

Q9HN85              	100.00%		H2QTC0              	100.00%
Q9HR19              	17.95%		
Bootstrap support for Q9HN85 as seed ortholog is 100%.
Bootstrap support for H2QTC0 as seed ortholog is 100%.

Group of orthologs #290. Best score 76 bits
Score difference with first non-orthologous sequence - H.salinarum:76 P.troglodytes:76

Q9HN45              	100.00%		H2QJX3              	100.00%
Bootstrap support for Q9HN45 as seed ortholog is 100%.
Bootstrap support for H2QJX3 as seed ortholog is 100%.

Group of orthologs #291. Best score 76 bits
Score difference with first non-orthologous sequence - H.salinarum:76 P.troglodytes:76

Q9HS46              	100.00%		H2QTH0              	100.00%
Bootstrap support for Q9HS46 as seed ortholog is 100%.
Bootstrap support for H2QTH0 as seed ortholog is 100%.

Group of orthologs #292. Best score 75 bits
Score difference with first non-orthologous sequence - H.salinarum:75 P.troglodytes:75

Q9HQZ3              	100.00%		H2R8H9              	100.00%
                    	       		H2R851              	19.07%
Bootstrap support for Q9HQZ3 as seed ortholog is 100%.
Bootstrap support for H2R8H9 as seed ortholog is 100%.

Group of orthologs #293. Best score 74 bits
Score difference with first non-orthologous sequence - H.salinarum:74 P.troglodytes:74

Q9HNK3              	100.00%		H2Q7F6              	100.00%
Bootstrap support for Q9HNK3 as seed ortholog is 100%.
Bootstrap support for H2Q7F6 as seed ortholog is 100%.

Group of orthologs #294. Best score 74 bits
Score difference with first non-orthologous sequence - H.salinarum:74 P.troglodytes:74

P13575              	100.00%		H2QSV7              	100.00%
Bootstrap support for P13575 as seed ortholog is 100%.
Bootstrap support for H2QSV7 as seed ortholog is 100%.

Group of orthologs #295. Best score 73 bits
Score difference with first non-orthologous sequence - H.salinarum:73 P.troglodytes:73

Q9HP88              	100.00%		H2Q2E1              	100.00%
Q9HPD8              	47.49%		
Bootstrap support for Q9HP88 as seed ortholog is 100%.
Bootstrap support for H2Q2E1 as seed ortholog is 100%.

Group of orthologs #296. Best score 73 bits
Score difference with first non-orthologous sequence - H.salinarum:73 P.troglodytes:73

Q9HQ12              	100.00%		H2QWC6              	100.00%
                    	       		H2QE97              	42.31%
Bootstrap support for Q9HQ12 as seed ortholog is 100%.
Bootstrap support for H2QWC6 as seed ortholog is 100%.

Group of orthologs #297. Best score 73 bits
Score difference with first non-orthologous sequence - H.salinarum:73 P.troglodytes:5

Q9HP76              	100.00%		H2R2D4              	100.00%
                    	       		H2RBY6              	53.08%
Bootstrap support for Q9HP76 as seed ortholog is 100%.
Bootstrap support for H2R2D4 as seed ortholog is 51%.
Alternative seed ortholog is H2QVI1 (5 bits away from this cluster)

Group of orthologs #298. Best score 72 bits
Score difference with first non-orthologous sequence - H.salinarum:72 P.troglodytes:72

Q9HN64              	100.00%		Q6GVM3              	100.00%
Q9HP87              	48.09%		H2QYD9              	64.60%
Bootstrap support for Q9HN64 as seed ortholog is 100%.
Bootstrap support for Q6GVM3 as seed ortholog is 100%.

Group of orthologs #299. Best score 72 bits
Score difference with first non-orthologous sequence - H.salinarum:72 P.troglodytes:72

Q9HQJ3              	100.00%		H2QGV2              	100.00%
Bootstrap support for Q9HQJ3 as seed ortholog is 100%.
Bootstrap support for H2QGV2 as seed ortholog is 100%.

Group of orthologs #300. Best score 71 bits
Score difference with first non-orthologous sequence - H.salinarum:71 P.troglodytes:71

Q9HNF8              	100.00%		H2Q5L8              	100.00%
Q9HS64              	8.32%		H2QGS7              	50.07%
Bootstrap support for Q9HNF8 as seed ortholog is 100%.
Bootstrap support for H2Q5L8 as seed ortholog is 100%.

Group of orthologs #301. Best score 71 bits
Score difference with first non-orthologous sequence - H.salinarum:71 P.troglodytes:71

Q9HR25              	100.00%		H2QUK2              	100.00%
Q9HP14              	19.37%		H2QIV0              	57.71%
Bootstrap support for Q9HR25 as seed ortholog is 100%.
Bootstrap support for H2QUK2 as seed ortholog is 100%.

Group of orthologs #302. Best score 71 bits
Score difference with first non-orthologous sequence - H.salinarum:71 P.troglodytes:71

Q9HNR3              	100.00%		H2QFH0              	100.00%
Bootstrap support for Q9HNR3 as seed ortholog is 100%.
Bootstrap support for H2QFH0 as seed ortholog is 100%.

Group of orthologs #303. Best score 71 bits
Score difference with first non-orthologous sequence - H.salinarum:71 P.troglodytes:71

Q9HPZ0              	100.00%		H2QTC9              	100.00%
Bootstrap support for Q9HPZ0 as seed ortholog is 100%.
Bootstrap support for H2QTC9 as seed ortholog is 100%.

Group of orthologs #304. Best score 71 bits
Score difference with first non-orthologous sequence - H.salinarum:71 P.troglodytes:71

Q9HRA5              	100.00%		H2RD77              	100.00%
Bootstrap support for Q9HRA5 as seed ortholog is 100%.
Bootstrap support for H2RD77 as seed ortholog is 100%.

Group of orthologs #305. Best score 70 bits
Score difference with first non-orthologous sequence - H.salinarum:70 P.troglodytes:70

Q9HQJ1              	100.00%		H2Q2W2              	100.00%
Bootstrap support for Q9HQJ1 as seed ortholog is 100%.
Bootstrap support for H2Q2W2 as seed ortholog is 100%.

Group of orthologs #306. Best score 70 bits
Score difference with first non-orthologous sequence - H.salinarum:70 P.troglodytes:70

Q9HP66              	100.00%		H2Q6H1              	100.00%
Bootstrap support for Q9HP66 as seed ortholog is 100%.
Bootstrap support for H2Q6H1 as seed ortholog is 100%.

Group of orthologs #307. Best score 70 bits
Score difference with first non-orthologous sequence - H.salinarum:70 P.troglodytes:70

Q9HQ87              	100.00%		H2QUN6              	100.00%
Bootstrap support for Q9HQ87 as seed ortholog is 100%.
Bootstrap support for H2QUN6 as seed ortholog is 100%.

Group of orthologs #308. Best score 69 bits
Score difference with first non-orthologous sequence - H.salinarum:69 P.troglodytes:15

Q9HNL1              	100.00%		H2Q3W9              	100.00%
Bootstrap support for Q9HNL1 as seed ortholog is 100%.
Bootstrap support for H2Q3W9 as seed ortholog is 73%.
Alternative seed ortholog is H2QLS5 (15 bits away from this cluster)

Group of orthologs #309. Best score 69 bits
Score difference with first non-orthologous sequence - H.salinarum:69 P.troglodytes:69

Q9HNT1              	100.00%		H2QFC4              	100.00%
Bootstrap support for Q9HNT1 as seed ortholog is 100%.
Bootstrap support for H2QFC4 as seed ortholog is 100%.

Group of orthologs #310. Best score 69 bits
Score difference with first non-orthologous sequence - H.salinarum:69 P.troglodytes:69

Q9HMJ3              	100.00%		H2QHP0              	100.00%
Bootstrap support for Q9HMJ3 as seed ortholog is 100%.
Bootstrap support for H2QHP0 as seed ortholog is 100%.

Group of orthologs #311. Best score 68 bits
Score difference with first non-orthologous sequence - H.salinarum:68 P.troglodytes:68

Q9HSD9              	100.00%		H2Q532              	100.00%
Bootstrap support for Q9HSD9 as seed ortholog is 100%.
Bootstrap support for H2Q532 as seed ortholog is 100%.

Group of orthologs #312. Best score 66 bits
Score difference with first non-orthologous sequence - H.salinarum:66 P.troglodytes:66

Q9HQH8              	100.00%		H2RCJ5              	100.00%
                    	       		H2RBS0              	10.36%
Bootstrap support for Q9HQH8 as seed ortholog is 100%.
Bootstrap support for H2RCJ5 as seed ortholog is 100%.

Group of orthologs #313. Best score 66 bits
Score difference with first non-orthologous sequence - H.salinarum:66 P.troglodytes:66

Q9HNP6              	100.00%		H2Q528              	100.00%
Bootstrap support for Q9HNP6 as seed ortholog is 100%.
Bootstrap support for H2Q528 as seed ortholog is 100%.

Group of orthologs #314. Best score 66 bits
Score difference with first non-orthologous sequence - H.salinarum:66 P.troglodytes:66

Q9HMR1              	100.00%		H2QUL8              	100.00%
Bootstrap support for Q9HMR1 as seed ortholog is 100%.
Bootstrap support for H2QUL8 as seed ortholog is 100%.

Group of orthologs #315. Best score 66 bits
Score difference with first non-orthologous sequence - H.salinarum:66 P.troglodytes:66

Q9HSD1              	100.00%		H2QWA4              	100.00%
Bootstrap support for Q9HSD1 as seed ortholog is 100%.
Bootstrap support for H2QWA4 as seed ortholog is 100%.

Group of orthologs #316. Best score 65 bits
Score difference with first non-orthologous sequence - H.salinarum:65 P.troglodytes:65

Q9HP28              	100.00%		H2QFG9              	100.00%
                    	       		H2PYX4              	78.30%
                    	       		H2Q2N6              	59.53%
Bootstrap support for Q9HP28 as seed ortholog is 100%.
Bootstrap support for H2QFG9 as seed ortholog is 100%.

Group of orthologs #317. Best score 65 bits
Score difference with first non-orthologous sequence - H.salinarum:65 P.troglodytes:25

Q9HNA0              	100.00%		H2QRF6              	100.00%
                    	       		H2QX91              	50.76%
Bootstrap support for Q9HNA0 as seed ortholog is 100%.
Bootstrap support for H2QRF6 as seed ortholog is 86%.

Group of orthologs #318. Best score 65 bits
Score difference with first non-orthologous sequence - H.salinarum:65 P.troglodytes:65

Q9HRY0              	100.00%		H2QP70              	100.00%
                    	       		H2QRR7              	31.59%
Bootstrap support for Q9HRY0 as seed ortholog is 100%.
Bootstrap support for H2QP70 as seed ortholog is 100%.

Group of orthologs #319. Best score 65 bits
Score difference with first non-orthologous sequence - H.salinarum:65 P.troglodytes:65

Q9HMM5              	100.00%		H2Q6T5              	100.00%
Bootstrap support for Q9HMM5 as seed ortholog is 100%.
Bootstrap support for H2Q6T5 as seed ortholog is 100%.

Group of orthologs #320. Best score 65 bits
Score difference with first non-orthologous sequence - H.salinarum:65 P.troglodytes:22

Q9HS29              	100.00%		H2QX59              	100.00%
Bootstrap support for Q9HS29 as seed ortholog is 100%.
Bootstrap support for H2QX59 as seed ortholog is 81%.

Group of orthologs #321. Best score 64 bits
Score difference with first non-orthologous sequence - H.salinarum:64 P.troglodytes:64

Q9HSG8              	100.00%		H2QZS9              	100.00%
Bootstrap support for Q9HSG8 as seed ortholog is 100%.
Bootstrap support for H2QZS9 as seed ortholog is 100%.

Group of orthologs #322. Best score 62 bits
Score difference with first non-orthologous sequence - H.salinarum:62 P.troglodytes:62

Q9HP40              	100.00%		H2Q1J2              	100.00%
                    	       		H2Q1J1              	48.20%
Bootstrap support for Q9HP40 as seed ortholog is 100%.
Bootstrap support for H2Q1J2 as seed ortholog is 100%.

Group of orthologs #323. Best score 62 bits
Score difference with first non-orthologous sequence - H.salinarum:62 P.troglodytes:62

Q9HPS3              	100.00%		G2HJL2              	100.00%
Bootstrap support for Q9HPS3 as seed ortholog is 100%.
Bootstrap support for G2HJL2 as seed ortholog is 100%.

Group of orthologs #324. Best score 60 bits
Score difference with first non-orthologous sequence - H.salinarum:60 P.troglodytes:60

Q9HMN2              	100.00%		H2Q619              	100.00%
Bootstrap support for Q9HMN2 as seed ortholog is 100%.
Bootstrap support for H2Q619 as seed ortholog is 100%.

Group of orthologs #325. Best score 59 bits
Score difference with first non-orthologous sequence - H.salinarum:59 P.troglodytes:59

O46709              	100.00%		H2QXP0              	100.00%
Q9HMD0              	11.67%		H2R6G2              	25.32%
Bootstrap support for O46709 as seed ortholog is 100%.
Bootstrap support for H2QXP0 as seed ortholog is 100%.

Group of orthologs #326. Best score 59 bits
Score difference with first non-orthologous sequence - H.salinarum:59 P.troglodytes:59

Q9HS42              	100.00%		H2QLR3              	100.00%
Bootstrap support for Q9HS42 as seed ortholog is 100%.
Bootstrap support for H2QLR3 as seed ortholog is 100%.

Group of orthologs #327. Best score 58 bits
Score difference with first non-orthologous sequence - H.salinarum:58 P.troglodytes:58

Q9HHE9              	100.00%		A6H914              	100.00%
Q48325              	86.47%		H2RD22              	25.72%
O52018              	74.59%		
Q9HN56              	65.35%		
O52004              	28.05%		
Bootstrap support for Q9HHE9 as seed ortholog is 100%.
Bootstrap support for A6H914 as seed ortholog is 100%.

Group of orthologs #328. Best score 58 bits
Score difference with first non-orthologous sequence - H.salinarum:58 P.troglodytes:11

Q9HNV3              	100.00%		H2Q592              	100.00%
Q9HML4              	7.10%		Q0MQB4              	100.00%
Bootstrap support for Q9HNV3 as seed ortholog is 100%.
Bootstrap support for H2Q592 as seed ortholog is 54%.
Alternative seed ortholog is H2QGC7 (11 bits away from this cluster)
Bootstrap support for Q0MQB4 as seed ortholog is 53%.
Alternative seed ortholog is H2QGC7 (11 bits away from this cluster)

Group of orthologs #329. Best score 58 bits
Score difference with first non-orthologous sequence - H.salinarum:58 P.troglodytes:58

Q9HR08              	100.00%		H2QKK7              	100.00%
Bootstrap support for Q9HR08 as seed ortholog is 100%.
Bootstrap support for H2QKK7 as seed ortholog is 100%.

Group of orthologs #330. Best score 58 bits
Score difference with first non-orthologous sequence - H.salinarum:58 P.troglodytes:58

Q9HQR8              	100.00%		H2QMT1              	100.00%
Bootstrap support for Q9HQR8 as seed ortholog is 100%.
Bootstrap support for H2QMT1 as seed ortholog is 100%.

Group of orthologs #331. Best score 57 bits
Score difference with first non-orthologous sequence - H.salinarum:57 P.troglodytes:57

Q9HN05              	100.00%		H2R400              	100.00%
                    	       		H2QYT7              	13.94%
Bootstrap support for Q9HN05 as seed ortholog is 100%.
Bootstrap support for H2R400 as seed ortholog is 100%.

Group of orthologs #332. Best score 57 bits
Score difference with first non-orthologous sequence - H.salinarum:57 P.troglodytes:57

Q9HQS1              	100.00%		H2QR10              	100.00%
Bootstrap support for Q9HQS1 as seed ortholog is 100%.
Bootstrap support for H2QR10 as seed ortholog is 100%.

Group of orthologs #333. Best score 56 bits
Score difference with first non-orthologous sequence - H.salinarum:56 P.troglodytes:7

Q9HHV6              	100.00%		H2QXT4              	100.00%
                    	       		H2Q7G0              	64.02%
                    	       		H2Q0P5              	44.33%
Bootstrap support for Q9HHV6 as seed ortholog is 100%.
Bootstrap support for H2QXT4 as seed ortholog is 56%.
Alternative seed ortholog is G2HHK9 (7 bits away from this cluster)

Group of orthologs #334. Best score 56 bits
Score difference with first non-orthologous sequence - H.salinarum:56 P.troglodytes:56

Q9HSV2              	100.00%		H2QYB7              	100.00%
Q9HRP9              	11.94%		
Bootstrap support for Q9HSV2 as seed ortholog is 100%.
Bootstrap support for H2QYB7 as seed ortholog is 100%.

Group of orthologs #335. Best score 56 bits
Score difference with first non-orthologous sequence - H.salinarum:56 P.troglodytes:56

Q9HS35              	100.00%		H2Q8Y9              	100.00%
Bootstrap support for Q9HS35 as seed ortholog is 100%.
Bootstrap support for H2Q8Y9 as seed ortholog is 100%.

Group of orthologs #336. Best score 56 bits
Score difference with first non-orthologous sequence - H.salinarum:56 P.troglodytes:56

Q9HNJ9              	100.00%		H2QR78              	100.00%
Bootstrap support for Q9HNJ9 as seed ortholog is 100%.
Bootstrap support for H2QR78 as seed ortholog is 100%.

Group of orthologs #337. Best score 54 bits
Score difference with first non-orthologous sequence - H.salinarum:54 P.troglodytes:54

Q9HP06              	100.00%		H2R9B7              	100.00%
                    	       		H2QHM1              	46.24%
                    	       		H2QWL9              	42.63%
                    	       		H2Q9D4              	31.79%
                    	       		H2Q133              	12.14%
Bootstrap support for Q9HP06 as seed ortholog is 100%.
Bootstrap support for H2R9B7 as seed ortholog is 100%.

Group of orthologs #338. Best score 54 bits
Score difference with first non-orthologous sequence - H.salinarum:54 P.troglodytes:54

Q9HPB7              	100.00%		H2RGX4              	100.00%
Bootstrap support for Q9HPB7 as seed ortholog is 100%.
Bootstrap support for H2RGX4 as seed ortholog is 100%.

Group of orthologs #339. Best score 53 bits
Score difference with first non-orthologous sequence - H.salinarum:53 P.troglodytes:53

P50558              	100.00%		H2PYA9              	100.00%
Bootstrap support for P50558 as seed ortholog is 100%.
Bootstrap support for H2PYA9 as seed ortholog is 100%.

Group of orthologs #340. Best score 53 bits
Score difference with first non-orthologous sequence - H.salinarum:53 P.troglodytes:53

Q9HST1              	100.00%		G2HIC2              	100.00%
Bootstrap support for Q9HST1 as seed ortholog is 100%.
Bootstrap support for G2HIC2 as seed ortholog is 100%.

Group of orthologs #341. Best score 53 bits
Score difference with first non-orthologous sequence - H.salinarum:53 P.troglodytes:53

Q9HRT8              	100.00%		H2Q8H4              	100.00%
Bootstrap support for Q9HRT8 as seed ortholog is 100%.
Bootstrap support for H2Q8H4 as seed ortholog is 100%.

Group of orthologs #342. Best score 52 bits
Score difference with first non-orthologous sequence - H.salinarum:52 P.troglodytes:52

Q9HNJ2              	100.00%		H2QAB2              	100.00%
Q9HQ50              	21.21%		H2QJE4              	17.48%
Bootstrap support for Q9HNJ2 as seed ortholog is 100%.
Bootstrap support for H2QAB2 as seed ortholog is 100%.

Group of orthologs #343. Best score 52 bits
Score difference with first non-orthologous sequence - H.salinarum:52 P.troglodytes:52

Q9HPT9              	100.00%		G2HJ61              	100.00%
Bootstrap support for Q9HPT9 as seed ortholog is 100%.
Bootstrap support for G2HJ61 as seed ortholog is 100%.

Group of orthologs #344. Best score 52 bits
Score difference with first non-orthologous sequence - H.salinarum:52 P.troglodytes:52

Q9HPC3              	100.00%		H2QC81              	100.00%
Bootstrap support for Q9HPC3 as seed ortholog is 100%.
Bootstrap support for H2QC81 as seed ortholog is 100%.

Group of orthologs #345. Best score 52 bits
Score difference with first non-orthologous sequence - H.salinarum:52 P.troglodytes:52

Q9HP13              	100.00%		H2QHL3              	100.00%
Bootstrap support for Q9HP13 as seed ortholog is 100%.
Bootstrap support for H2QHL3 as seed ortholog is 100%.

Group of orthologs #346. Best score 52 bits
Score difference with first non-orthologous sequence - H.salinarum:52 P.troglodytes:52

Q9HQE2              	100.00%		H2QK46              	100.00%
Bootstrap support for Q9HQE2 as seed ortholog is 100%.
Bootstrap support for H2QK46 as seed ortholog is 100%.

Group of orthologs #347. Best score 52 bits
Score difference with first non-orthologous sequence - H.salinarum:52 P.troglodytes:52

Q9HMG4              	100.00%		H2R9I9              	100.00%
Bootstrap support for Q9HMG4 as seed ortholog is 100%.
Bootstrap support for H2R9I9 as seed ortholog is 100%.

Group of orthologs #348. Best score 52 bits
Score difference with first non-orthologous sequence - H.salinarum:52 P.troglodytes:4

Q9HS34              	100.00%		Q1XHV8              	100.00%
Bootstrap support for Q9HS34 as seed ortholog is 100%.
Bootstrap support for Q1XHV8 as seed ortholog is 55%.
Alternative seed ortholog is H2QA65 (4 bits away from this cluster)

Group of orthologs #349. Best score 50 bits
Score difference with first non-orthologous sequence - H.salinarum:50 P.troglodytes:50

Q9HSF3              	100.00%		H2Q212              	100.00%
                    	       		H2QPZ6              	59.15%
Bootstrap support for Q9HSF3 as seed ortholog is 100%.
Bootstrap support for H2Q212 as seed ortholog is 100%.

Group of orthologs #350. Best score 50 bits
Score difference with first non-orthologous sequence - H.salinarum:50 P.troglodytes:50

Q9HRM1              	100.00%		Q9T9V8              	100.00%
Bootstrap support for Q9HRM1 as seed ortholog is 100%.
Bootstrap support for Q9T9V8 as seed ortholog is 100%.

Group of orthologs #351. Best score 49 bits
Score difference with first non-orthologous sequence - H.salinarum:49 P.troglodytes:49

Q9HPA0              	100.00%		H2Q160              	100.00%
                    	       		H2Q161              	63.58%
Bootstrap support for Q9HPA0 as seed ortholog is 100%.
Bootstrap support for H2Q160 as seed ortholog is 100%.

Group of orthologs #352. Best score 49 bits
Score difference with first non-orthologous sequence - H.salinarum:49 P.troglodytes:49

Q9HRR8              	100.00%		H2QWG9              	100.00%
Q9HNP7              	35.41%		
Bootstrap support for Q9HRR8 as seed ortholog is 100%.
Bootstrap support for H2QWG9 as seed ortholog is 100%.

Group of orthologs #353. Best score 49 bits
Score difference with first non-orthologous sequence - H.salinarum:49 P.troglodytes:49

Q9HPV3              	100.00%		H2RBL2              	100.00%
Q9HPE1              	48.24%		
Bootstrap support for Q9HPV3 as seed ortholog is 100%.
Bootstrap support for H2RBL2 as seed ortholog is 100%.

Group of orthologs #354. Best score 49 bits
Score difference with first non-orthologous sequence - H.salinarum:49 P.troglodytes:49

P57710              	100.00%		H2RIH6              	100.00%
Bootstrap support for P57710 as seed ortholog is 100%.
Bootstrap support for H2RIH6 as seed ortholog is 100%.

Group of orthologs #355. Best score 48 bits
Score difference with first non-orthologous sequence - H.salinarum:48 P.troglodytes:48

Q9HRQ5              	100.00%		H2QAC2              	100.00%
Q9HS56              	9.40%		
Bootstrap support for Q9HRQ5 as seed ortholog is 100%.
Bootstrap support for H2QAC2 as seed ortholog is 100%.

Group of orthologs #356. Best score 48 bits
Score difference with first non-orthologous sequence - H.salinarum:48 P.troglodytes:48

Q9HP73              	100.00%		H2QRI5              	100.00%
                    	       		H2Q221              	44.60%
Bootstrap support for Q9HP73 as seed ortholog is 100%.
Bootstrap support for H2QRI5 as seed ortholog is 100%.

Group of orthologs #357. Best score 47 bits
Score difference with first non-orthologous sequence - H.salinarum:47 P.troglodytes:47

Q9HMM9              	100.00%		H2R084              	100.00%
                    	       		H2QNX7              	76.56%
Bootstrap support for Q9HMM9 as seed ortholog is 100%.
Bootstrap support for H2R084 as seed ortholog is 100%.

Group of orthologs #358. Best score 47 bits
Score difference with first non-orthologous sequence - H.salinarum:47 P.troglodytes:47

Q9HRT7              	100.00%		H2Q048              	100.00%
Bootstrap support for Q9HRT7 as seed ortholog is 100%.
Bootstrap support for H2Q048 as seed ortholog is 100%.

Group of orthologs #359. Best score 47 bits
Score difference with first non-orthologous sequence - H.salinarum:47 P.troglodytes:47

Q9HRT1              	100.00%		H2QBQ7              	100.00%
Bootstrap support for Q9HRT1 as seed ortholog is 100%.
Bootstrap support for H2QBQ7 as seed ortholog is 100%.

Group of orthologs #360. Best score 45 bits
Score difference with first non-orthologous sequence - H.salinarum:45 P.troglodytes:45

Q9HHE4              	100.00%		H2QJY2              	100.00%
                    	       		H2R3B2              	41.17%
Bootstrap support for Q9HHE4 as seed ortholog is 100%.
Bootstrap support for H2QJY2 as seed ortholog is 100%.

Group of orthologs #361. Best score 45 bits
Score difference with first non-orthologous sequence - H.salinarum:45 P.troglodytes:45

Q9HPF1              	100.00%		G2HHR9              	100.00%
Bootstrap support for Q9HPF1 as seed ortholog is 100%.
Bootstrap support for G2HHR9 as seed ortholog is 100%.

Group of orthologs #362. Best score 45 bits
Score difference with first non-orthologous sequence - H.salinarum:45 P.troglodytes:45

Q9HNV4              	100.00%		H2QJR9              	100.00%
Bootstrap support for Q9HNV4 as seed ortholog is 100%.
Bootstrap support for H2QJR9 as seed ortholog is 100%.

Group of orthologs #363. Best score 45 bits
Score difference with first non-orthologous sequence - H.salinarum:45 P.troglodytes:45

P20378              	100.00%		H2QSD9              	100.00%
Bootstrap support for P20378 as seed ortholog is 100%.
Bootstrap support for H2QSD9 as seed ortholog is 100%.

Group of orthologs #364. Best score 45 bits
Score difference with first non-orthologous sequence - H.salinarum:45 P.troglodytes:45

P05969              	100.00%		H2QZG4              	100.00%
Bootstrap support for P05969 as seed ortholog is 100%.
Bootstrap support for H2QZG4 as seed ortholog is 100%.

Group of orthologs #365. Best score 45 bits
Score difference with first non-orthologous sequence - H.salinarum:45 P.troglodytes:45

Q9HPC0              	100.00%		H2R1P3              	100.00%
Bootstrap support for Q9HPC0 as seed ortholog is 100%.
Bootstrap support for H2R1P3 as seed ortholog is 100%.

Group of orthologs #366. Best score 45 bits
Score difference with first non-orthologous sequence - H.salinarum:45 P.troglodytes:45

Q9HQE3              	100.00%		H2RCT5              	100.00%
Bootstrap support for Q9HQE3 as seed ortholog is 100%.
Bootstrap support for H2RCT5 as seed ortholog is 100%.

Group of orthologs #367. Best score 45 bits
Score difference with first non-orthologous sequence - H.salinarum:45 P.troglodytes:45

Q9HQE6              	100.00%		H2RFX7              	100.00%
Bootstrap support for Q9HQE6 as seed ortholog is 100%.
Bootstrap support for H2RFX7 as seed ortholog is 100%.

Group of orthologs #368. Best score 44 bits
Score difference with first non-orthologous sequence - H.salinarum:44 P.troglodytes:44

Q9HRM9              	100.00%		H2RGP9              	100.00%
Q9HN18              	31.02%		
Bootstrap support for Q9HRM9 as seed ortholog is 100%.
Bootstrap support for H2RGP9 as seed ortholog is 100%.

Group of orthologs #369. Best score 43 bits
Score difference with first non-orthologous sequence - H.salinarum:43 P.troglodytes:43

Q9HRG3              	100.00%		H2QL91              	100.00%
                    	       		P86243              	24.12%
Bootstrap support for Q9HRG3 as seed ortholog is 100%.
Bootstrap support for H2QL91 as seed ortholog is 100%.

Group of orthologs #370. Best score 43 bits
Score difference with first non-orthologous sequence - H.salinarum:43 P.troglodytes:43

Q9HQ21              	100.00%		H2QRB6              	100.00%
Bootstrap support for Q9HQ21 as seed ortholog is 100%.
Bootstrap support for H2QRB6 as seed ortholog is 100%.

Group of orthologs #371. Best score 42 bits
Score difference with first non-orthologous sequence - H.salinarum:42 P.troglodytes:42

Q9HHW1              	100.00%		H2Q4R8              	100.00%
                    	       		H2QL35              	45.48%
                    	       		H2QG43              	31.46%
                    	       		H2QUT1              	25.55%
                    	       		H2R4Z0              	22.12%
                    	       		H2Q6Z7              	12.15%
Bootstrap support for Q9HHW1 as seed ortholog is 100%.
Bootstrap support for H2Q4R8 as seed ortholog is 100%.

Group of orthologs #372. Best score 42 bits
Score difference with first non-orthologous sequence - H.salinarum:42 P.troglodytes:42

Q9HQS3              	100.00%		H2QY72              	100.00%
Q9HPT1              	6.11%		
Bootstrap support for Q9HQS3 as seed ortholog is 100%.
Bootstrap support for H2QY72 as seed ortholog is 100%.

Group of orthologs #373. Best score 42 bits
Score difference with first non-orthologous sequence - H.salinarum:42 P.troglodytes:42

Q9HR86              	100.00%		H2Q3A7              	100.00%
Bootstrap support for Q9HR86 as seed ortholog is 100%.
Bootstrap support for H2Q3A7 as seed ortholog is 100%.

Group of orthologs #374. Best score 42 bits
Score difference with first non-orthologous sequence - H.salinarum:42 P.troglodytes:42

Q9HS20              	100.00%		H2QE69              	100.00%
Bootstrap support for Q9HS20 as seed ortholog is 100%.
Bootstrap support for H2QE69 as seed ortholog is 100%.

Group of orthologs #375. Best score 41 bits
Score difference with first non-orthologous sequence - H.salinarum:41 P.troglodytes:41

Q9HMR8              	100.00%		H2QA06              	100.00%
                    	       		H2QEL3              	52.98%
Bootstrap support for Q9HMR8 as seed ortholog is 100%.
Bootstrap support for H2QA06 as seed ortholog is 100%.

Group of orthologs #376. Best score 41 bits
Score difference with first non-orthologous sequence - H.salinarum:41 P.troglodytes:41

Q9HR63              	100.00%		H2QUQ4              	100.00%
Bootstrap support for Q9HR63 as seed ortholog is 100%.
Bootstrap support for H2QUQ4 as seed ortholog is 100%.

Group of orthologs #377. Best score 40 bits
Score difference with first non-orthologous sequence - H.salinarum:40 P.troglodytes:40

Q9HQ28              	100.00%		H2PZV6              	100.00%
                    	       		H2QAW9              	6.84%
Bootstrap support for Q9HQ28 as seed ortholog is 100%.
Bootstrap support for H2PZV6 as seed ortholog is 100%.

Group of orthologs #378. Best score 40 bits
Score difference with first non-orthologous sequence - H.salinarum:40 P.troglodytes:40

Q9HSE1              	100.00%		H2Q0G1              	100.00%
Bootstrap support for Q9HSE1 as seed ortholog is 100%.
Bootstrap support for H2Q0G1 as seed ortholog is 100%.

Group of orthologs #379. Best score 40 bits
Score difference with first non-orthologous sequence - H.salinarum:40 P.troglodytes:40

Q9HNQ6              	100.00%		H2R306              	100.00%
Bootstrap support for Q9HNQ6 as seed ortholog is 100%.
Bootstrap support for H2R306 as seed ortholog is 100%.