###################################
332 groups of orthologs
396 in-paralogs from H.salinarum
418 in-paralogs from P.pallidum
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 628 bits
Score difference with first non-orthologous sequence - H.salinarum:315 P.pallidum:363

Q9HPQ0              	100.00%		D3BVH1              	100.00%
Bootstrap support for Q9HPQ0 as seed ortholog is 100%.
Bootstrap support for D3BVH1 as seed ortholog is 100%.

Group of orthologs #2. Best score 598 bits
Score difference with first non-orthologous sequence - H.salinarum:598 P.pallidum:229

P0CX02              	100.00%		D3BKC8              	100.00%
                    	       		D3BJK4              	9.85%
Bootstrap support for P0CX02 as seed ortholog is 100%.
Bootstrap support for D3BKC8 as seed ortholog is 99%.

Group of orthologs #3. Best score 597 bits
Score difference with first non-orthologous sequence - H.salinarum:265 P.pallidum:107

Q9HPU1              	100.00%		D3BIX9              	100.00%
Q9HHW2              	44.28%		
Q9HPF0              	18.72%		
Bootstrap support for Q9HPU1 as seed ortholog is 100%.
Bootstrap support for D3BIX9 as seed ortholog is 98%.

Group of orthologs #4. Best score 554 bits
Score difference with first non-orthologous sequence - H.salinarum:554 P.pallidum:61

Q9HRY2              	100.00%		D3AY31              	100.00%
Bootstrap support for Q9HRY2 as seed ortholog is 100%.
Bootstrap support for D3AY31 as seed ortholog is 94%.

Group of orthologs #5. Best score 532 bits
Score difference with first non-orthologous sequence - H.salinarum:532 P.pallidum:379

Q9HNE3              	100.00%		D3B700              	100.00%
Bootstrap support for Q9HNE3 as seed ortholog is 100%.
Bootstrap support for D3B700 as seed ortholog is 100%.

Group of orthologs #6. Best score 525 bits
Score difference with first non-orthologous sequence - H.salinarum:525 P.pallidum:406

Q9HNE4              	100.00%		D3B5K2              	100.00%
Bootstrap support for Q9HNE4 as seed ortholog is 100%.
Bootstrap support for D3B5K2 as seed ortholog is 100%.

Group of orthologs #7. Best score 521 bits
Score difference with first non-orthologous sequence - H.salinarum:521 P.pallidum:384

Q9HN72              	100.00%		D3BE62              	100.00%
Bootstrap support for Q9HN72 as seed ortholog is 100%.
Bootstrap support for D3BE62 as seed ortholog is 100%.

Group of orthologs #8. Best score 498 bits
Score difference with first non-orthologous sequence - H.salinarum:498 P.pallidum:387

Q9HMC1              	100.00%		D3AZB7              	100.00%
Bootstrap support for Q9HMC1 as seed ortholog is 100%.
Bootstrap support for D3AZB7 as seed ortholog is 100%.

Group of orthologs #9. Best score 493 bits
Score difference with first non-orthologous sequence - H.salinarum:135 P.pallidum:139

Q9HQU8              	100.00%		D3B6W7              	100.00%
Bootstrap support for Q9HQU8 as seed ortholog is 99%.
Bootstrap support for D3B6W7 as seed ortholog is 99%.

Group of orthologs #10. Best score 487 bits
Score difference with first non-orthologous sequence - H.salinarum:167 P.pallidum:339

Q9HRH2              	100.00%		D3BB49              	100.00%
                    	       		D3BUW0              	12.31%
Bootstrap support for Q9HRH2 as seed ortholog is 99%.
Bootstrap support for D3BB49 as seed ortholog is 100%.

Group of orthologs #11. Best score 473 bits
Score difference with first non-orthologous sequence - H.salinarum:473 P.pallidum:473

P0CX03              	100.00%		D3B936              	100.00%
                    	       		D3BHD6              	9.74%
Bootstrap support for P0CX03 as seed ortholog is 100%.
Bootstrap support for D3B936 as seed ortholog is 100%.

Group of orthologs #12. Best score 472 bits
Score difference with first non-orthologous sequence - H.salinarum:472 P.pallidum:472

Q9HP32              	100.00%		D3B5W3              	100.00%
Bootstrap support for Q9HP32 as seed ortholog is 100%.
Bootstrap support for D3B5W3 as seed ortholog is 100%.

Group of orthologs #13. Best score 468 bits
Score difference with first non-orthologous sequence - H.salinarum:334 P.pallidum:468

Q9HMU3              	100.00%		D3BIF3              	100.00%
Bootstrap support for Q9HMU3 as seed ortholog is 100%.
Bootstrap support for D3BIF3 as seed ortholog is 100%.

Group of orthologs #14. Best score 465 bits
Score difference with first non-orthologous sequence - H.salinarum:465 P.pallidum:465

Q9HRZ1              	100.00%		D3BT33              	100.00%
Bootstrap support for Q9HRZ1 as seed ortholog is 100%.
Bootstrap support for D3BT33 as seed ortholog is 100%.

Group of orthologs #15. Best score 445 bits
Score difference with first non-orthologous sequence - H.salinarum:445 P.pallidum:123

Q9HM85              	100.00%		D3BU68              	100.00%
                    	       		D3BHD0              	39.41%
                    	       		D3BFQ2              	8.99%
Bootstrap support for Q9HM85 as seed ortholog is 100%.
Bootstrap support for D3BU68 as seed ortholog is 96%.

Group of orthologs #16. Best score 435 bits
Score difference with first non-orthologous sequence - H.salinarum:435 P.pallidum:435

Q9HQ29              	100.00%		D3BB77              	100.00%
Bootstrap support for Q9HQ29 as seed ortholog is 100%.
Bootstrap support for D3BB77 as seed ortholog is 100%.

Group of orthologs #17. Best score 431 bits
Score difference with first non-orthologous sequence - H.salinarum:431 P.pallidum:161

Q9HSL6              	100.00%		D3BKR5              	100.00%
Q9HSM2              	16.24%		
Bootstrap support for Q9HSL6 as seed ortholog is 100%.
Bootstrap support for D3BKR5 as seed ortholog is 99%.

Group of orthologs #18. Best score 431 bits
Score difference with first non-orthologous sequence - H.salinarum:431 P.pallidum:154

Q9HNS5              	100.00%		D3BT28              	100.00%
Bootstrap support for Q9HNS5 as seed ortholog is 100%.
Bootstrap support for D3BT28 as seed ortholog is 99%.

Group of orthologs #19. Best score 428 bits
Score difference with first non-orthologous sequence - H.salinarum:428 P.pallidum:428

Q9HP27              	100.00%		D3BMT5              	100.00%
                    	       		D3AY33              	18.68%
Bootstrap support for Q9HP27 as seed ortholog is 100%.
Bootstrap support for D3BMT5 as seed ortholog is 100%.

Group of orthologs #20. Best score 425 bits
Score difference with first non-orthologous sequence - H.salinarum:425 P.pallidum:127

Q9HN97              	100.00%		D3BUX1              	100.00%
Bootstrap support for Q9HN97 as seed ortholog is 100%.
Bootstrap support for D3BUX1 as seed ortholog is 97%.

Group of orthologs #21. Best score 415 bits
Score difference with first non-orthologous sequence - H.salinarum:415 P.pallidum:415

Q9HPP8              	100.00%		D3BHW3              	100.00%
                    	       		D3BRG0              	6.00%
Bootstrap support for Q9HPP8 as seed ortholog is 100%.
Bootstrap support for D3BHW3 as seed ortholog is 100%.

Group of orthologs #22. Best score 400 bits
Score difference with first non-orthologous sequence - H.salinarum:400 P.pallidum:400

Q9HMW7              	100.00%		D3B7L4              	100.00%
Bootstrap support for Q9HMW7 as seed ortholog is 100%.
Bootstrap support for D3B7L4 as seed ortholog is 100%.

Group of orthologs #23. Best score 399 bits
Score difference with first non-orthologous sequence - H.salinarum:399 P.pallidum:114

Q9HM89              	100.00%		D3BP51              	100.00%
Bootstrap support for Q9HM89 as seed ortholog is 100%.
Bootstrap support for D3BP51 as seed ortholog is 99%.

Group of orthologs #24. Best score 381 bits
Score difference with first non-orthologous sequence - H.salinarum:41 P.pallidum:111

Q9HQG7              	100.00%		D3BFM3              	100.00%
Bootstrap support for Q9HQG7 as seed ortholog is 87%.
Bootstrap support for D3BFM3 as seed ortholog is 99%.

Group of orthologs #25. Best score 374 bits
Score difference with first non-orthologous sequence - H.salinarum:374 P.pallidum:374

Q9HPR3              	100.00%		D3BSF9              	100.00%
Bootstrap support for Q9HPR3 as seed ortholog is 100%.
Bootstrap support for D3BSF9 as seed ortholog is 100%.

Group of orthologs #26. Best score 372 bits
Score difference with first non-orthologous sequence - H.salinarum:372 P.pallidum:372

Q9HPV7              	100.00%		D3BEZ7              	100.00%
Bootstrap support for Q9HPV7 as seed ortholog is 100%.
Bootstrap support for D3BEZ7 as seed ortholog is 100%.

Group of orthologs #27. Best score 368 bits
Score difference with first non-orthologous sequence - H.salinarum:368 P.pallidum:303

Q9HS52              	100.00%		D3BRI9              	100.00%
Bootstrap support for Q9HS52 as seed ortholog is 100%.
Bootstrap support for D3BRI9 as seed ortholog is 100%.

Group of orthologs #28. Best score 351 bits
Score difference with first non-orthologous sequence - H.salinarum:351 P.pallidum:2

Q9HN70              	100.00%		D3BCV5              	100.00%
Q9HNI0              	33.10%		
Bootstrap support for Q9HN70 as seed ortholog is 100%.
Bootstrap support for D3BCV5 as seed ortholog is 49%.
Alternative seed ortholog is D3BPJ6 (2 bits away from this cluster)

Group of orthologs #29. Best score 351 bits
Score difference with first non-orthologous sequence - H.salinarum:351 P.pallidum:351

Q9HPS4              	100.00%		D3BPT5              	100.00%
Bootstrap support for Q9HPS4 as seed ortholog is 100%.
Bootstrap support for D3BPT5 as seed ortholog is 100%.

Group of orthologs #30. Best score 346 bits
Score difference with first non-orthologous sequence - H.salinarum:346 P.pallidum:238

Q9HNK9              	100.00%		D3B255              	100.00%
                    	       		D3B915              	26.70%
Bootstrap support for Q9HNK9 as seed ortholog is 100%.
Bootstrap support for D3B255 as seed ortholog is 100%.

Group of orthologs #31. Best score 341 bits
Score difference with first non-orthologous sequence - H.salinarum:341 P.pallidum:341

Q9HQ68              	100.00%		D3B6W1              	100.00%
Bootstrap support for Q9HQ68 as seed ortholog is 100%.
Bootstrap support for D3B6W1 as seed ortholog is 100%.

Group of orthologs #32. Best score 340 bits
Score difference with first non-orthologous sequence - H.salinarum:340 P.pallidum:11

Q9HNA5              	100.00%		D3BB39              	100.00%
Bootstrap support for Q9HNA5 as seed ortholog is 100%.
Bootstrap support for D3BB39 as seed ortholog is 60%.
Alternative seed ortholog is D3B0M9 (11 bits away from this cluster)

Group of orthologs #33. Best score 339 bits
Score difference with first non-orthologous sequence - H.salinarum:339 P.pallidum:339

Q9HS42              	100.00%		D3BUL3              	100.00%
Bootstrap support for Q9HS42 as seed ortholog is 100%.
Bootstrap support for D3BUL3 as seed ortholog is 100%.

Group of orthologs #34. Best score 337 bits
Score difference with first non-orthologous sequence - H.salinarum:337 P.pallidum:32

Q9HS95              	100.00%		D3BDE5              	100.00%
Bootstrap support for Q9HS95 as seed ortholog is 100%.
Bootstrap support for D3BDE5 as seed ortholog is 70%.
Alternative seed ortholog is D3BQ59 (32 bits away from this cluster)

Group of orthologs #35. Best score 329 bits
Score difference with first non-orthologous sequence - H.salinarum:329 P.pallidum:160

Q9HR43              	100.00%		D3BAC1              	100.00%
Bootstrap support for Q9HR43 as seed ortholog is 100%.
Bootstrap support for D3BAC1 as seed ortholog is 99%.

Group of orthologs #36. Best score 329 bits
Score difference with first non-orthologous sequence - H.salinarum:329 P.pallidum:329

Q9HP57              	100.00%		D3BPW8              	100.00%
Bootstrap support for Q9HP57 as seed ortholog is 100%.
Bootstrap support for D3BPW8 as seed ortholog is 100%.

Group of orthologs #37. Best score 328 bits
Score difference with first non-orthologous sequence - H.salinarum:328 P.pallidum:269

Q9HT00              	100.00%		D3BT14              	100.00%
Bootstrap support for Q9HT00 as seed ortholog is 100%.
Bootstrap support for D3BT14 as seed ortholog is 100%.

Group of orthologs #38. Best score 324 bits
Score difference with first non-orthologous sequence - H.salinarum:324 P.pallidum:324

Q9HQD8              	100.00%		D3BI11              	100.00%
Bootstrap support for Q9HQD8 as seed ortholog is 100%.
Bootstrap support for D3BI11 as seed ortholog is 100%.

Group of orthologs #39. Best score 320 bits
Score difference with first non-orthologous sequence - H.salinarum:320 P.pallidum:320

Q9HNZ5              	100.00%		D3B588              	100.00%
                    	       		D3BKC2              	25.21%
Bootstrap support for Q9HNZ5 as seed ortholog is 100%.
Bootstrap support for D3B588 as seed ortholog is 100%.

Group of orthologs #40. Best score 318 bits
Score difference with first non-orthologous sequence - H.salinarum:318 P.pallidum:318

Q9HN78              	100.00%		D3B481              	100.00%
Bootstrap support for Q9HN78 as seed ortholog is 100%.
Bootstrap support for D3B481 as seed ortholog is 100%.

Group of orthologs #41. Best score 317 bits
Score difference with first non-orthologous sequence - H.salinarum:317 P.pallidum:317

Q9HQD5              	100.00%		D3BC51              	100.00%
Bootstrap support for Q9HQD5 as seed ortholog is 100%.
Bootstrap support for D3BC51 as seed ortholog is 100%.

Group of orthologs #42. Best score 316 bits
Score difference with first non-orthologous sequence - H.salinarum:143 P.pallidum:29

Q9HRW6              	100.00%		D3B6W8              	100.00%
                    	       		D3B5U3              	11.89%
Bootstrap support for Q9HRW6 as seed ortholog is 100%.
Bootstrap support for D3B6W8 as seed ortholog is 80%.

Group of orthologs #43. Best score 312 bits
Score difference with first non-orthologous sequence - H.salinarum:312 P.pallidum:312

Q9HPY5              	100.00%		D3B2S5              	100.00%
                    	       		D3BUR5              	56.96%
Bootstrap support for Q9HPY5 as seed ortholog is 100%.
Bootstrap support for D3B2S5 as seed ortholog is 100%.

Group of orthologs #44. Best score 309 bits
Score difference with first non-orthologous sequence - H.salinarum:309 P.pallidum:138

Q9HMF1              	100.00%		D3BTY9              	100.00%
Bootstrap support for Q9HMF1 as seed ortholog is 100%.
Bootstrap support for D3BTY9 as seed ortholog is 98%.

Group of orthologs #45. Best score 307 bits
Score difference with first non-orthologous sequence - H.salinarum:307 P.pallidum:307

Q9HQM6              	100.00%		D3BTQ4              	100.00%
Bootstrap support for Q9HQM6 as seed ortholog is 100%.
Bootstrap support for D3BTQ4 as seed ortholog is 100%.

Group of orthologs #46. Best score 306 bits
Score difference with first non-orthologous sequence - H.salinarum:140 P.pallidum:18

Q9HNP9              	100.00%		D3BPU8              	100.00%
Bootstrap support for Q9HNP9 as seed ortholog is 100%.
Bootstrap support for D3BPU8 as seed ortholog is 74%.
Alternative seed ortholog is D3BIZ6 (18 bits away from this cluster)

Group of orthologs #47. Best score 305 bits
Score difference with first non-orthologous sequence - H.salinarum:305 P.pallidum:159

Q9HSA4              	100.00%		D3BAM8              	100.00%
Bootstrap support for Q9HSA4 as seed ortholog is 100%.
Bootstrap support for D3BAM8 as seed ortholog is 99%.

Group of orthologs #48. Best score 292 bits
Score difference with first non-orthologous sequence - H.salinarum:192 P.pallidum:75

Q9HMK7              	100.00%		D3BPU6              	100.00%
Bootstrap support for Q9HMK7 as seed ortholog is 99%.
Bootstrap support for D3BPU6 as seed ortholog is 97%.

Group of orthologs #49. Best score 290 bits
Score difference with first non-orthologous sequence - H.salinarum:63 P.pallidum:40

Q9HRI6              	100.00%		D3BNV2              	100.00%
Q9HRB3              	12.02%		
Q9HPT2              	7.82%		
Bootstrap support for Q9HRI6 as seed ortholog is 97%.
Bootstrap support for D3BNV2 as seed ortholog is 88%.

Group of orthologs #50. Best score 290 bits
Score difference with first non-orthologous sequence - H.salinarum:290 P.pallidum:67

Q9HMG9              	100.00%		D3BPX3              	100.00%
                    	       		D3BC16              	25.93%
Bootstrap support for Q9HMG9 as seed ortholog is 100%.
Bootstrap support for D3BPX3 as seed ortholog is 84%.

Group of orthologs #51. Best score 284 bits
Score difference with first non-orthologous sequence - H.salinarum:284 P.pallidum:284

Q9HMN5              	100.00%		D3BBV3              	100.00%
Bootstrap support for Q9HMN5 as seed ortholog is 100%.
Bootstrap support for D3BBV3 as seed ortholog is 100%.

Group of orthologs #52. Best score 280 bits
Score difference with first non-orthologous sequence - H.salinarum:280 P.pallidum:280

Q9HN17              	100.00%		D3BTR1              	100.00%
Bootstrap support for Q9HN17 as seed ortholog is 100%.
Bootstrap support for D3BTR1 as seed ortholog is 100%.

Group of orthologs #53. Best score 279 bits
Score difference with first non-orthologous sequence - H.salinarum:279 P.pallidum:279

Q9HN50              	100.00%		D3BNY4              	100.00%
Bootstrap support for Q9HN50 as seed ortholog is 100%.
Bootstrap support for D3BNY4 as seed ortholog is 100%.

Group of orthologs #54. Best score 274 bits
Score difference with first non-orthologous sequence - H.salinarum:274 P.pallidum:274

Q9HQZ6              	100.00%		D3BGN9              	100.00%
                    	       		D3AW08              	39.72%
                    	       		D3B435              	23.20%
Bootstrap support for Q9HQZ6 as seed ortholog is 100%.
Bootstrap support for D3BGN9 as seed ortholog is 100%.

Group of orthologs #55. Best score 274 bits
Score difference with first non-orthologous sequence - H.salinarum:274 P.pallidum:138

Q9HPE4              	100.00%		D3AVT5              	100.00%
Bootstrap support for Q9HPE4 as seed ortholog is 100%.
Bootstrap support for D3AVT5 as seed ortholog is 99%.

Group of orthologs #56. Best score 272 bits
Score difference with first non-orthologous sequence - H.salinarum:272 P.pallidum:272

Q9HRM7              	100.00%		D3B061              	100.00%
Q9HQE1              	30.23%		
Q9HSM4              	19.24%		
Bootstrap support for Q9HRM7 as seed ortholog is 100%.
Bootstrap support for D3B061 as seed ortholog is 100%.

Group of orthologs #57. Best score 272 bits
Score difference with first non-orthologous sequence - H.salinarum:272 P.pallidum:272

Q9HPP1              	100.00%		D3B3G3              	100.00%
                    	       		D3B6H9              	38.52%
Bootstrap support for Q9HPP1 as seed ortholog is 100%.
Bootstrap support for D3B3G3 as seed ortholog is 100%.

Group of orthologs #58. Best score 272 bits
Score difference with first non-orthologous sequence - H.salinarum:272 P.pallidum:33

Q9HNK4              	100.00%		D3BPS6              	100.00%
Bootstrap support for Q9HNK4 as seed ortholog is 100%.
Bootstrap support for D3BPS6 as seed ortholog is 82%.

Group of orthologs #59. Best score 272 bits
Score difference with first non-orthologous sequence - H.salinarum:272 P.pallidum:272

Q9HQU4              	100.00%		D3BQJ8              	100.00%
Bootstrap support for Q9HQU4 as seed ortholog is 100%.
Bootstrap support for D3BQJ8 as seed ortholog is 100%.

Group of orthologs #60. Best score 270 bits
Score difference with first non-orthologous sequence - H.salinarum:270 P.pallidum:65

Q9HN26              	100.00%		D3BF32              	100.00%
                    	       		D3BS76              	100.00%
                    	       		D3BS79              	97.73%
                    	       		D3B0W0              	36.62%
Bootstrap support for Q9HN26 as seed ortholog is 100%.
Bootstrap support for D3BF32 as seed ortholog is 97%.
Bootstrap support for D3BS76 as seed ortholog is 96%.

Group of orthologs #61. Best score 270 bits
Score difference with first non-orthologous sequence - H.salinarum:270 P.pallidum:7

Q9HSQ7              	100.00%		D3AVP3              	100.00%
                    	       		D3B4X1              	9.19%
Bootstrap support for Q9HSQ7 as seed ortholog is 100%.
Bootstrap support for D3AVP3 as seed ortholog is 54%.
Alternative seed ortholog is D3BVI8 (7 bits away from this cluster)

Group of orthologs #62. Best score 267 bits
Score difference with first non-orthologous sequence - H.salinarum:267 P.pallidum:267

P17103              	100.00%		D3BE82              	100.00%
                    	       		D3BMS6              	35.48%
Bootstrap support for P17103 as seed ortholog is 100%.
Bootstrap support for D3BE82 as seed ortholog is 100%.

Group of orthologs #63. Best score 265 bits
Score difference with first non-orthologous sequence - H.salinarum:147 P.pallidum:265

Q9HS93              	100.00%		D3B508              	100.00%
Bootstrap support for Q9HS93 as seed ortholog is 99%.
Bootstrap support for D3B508 as seed ortholog is 100%.

Group of orthologs #64. Best score 262 bits
Score difference with first non-orthologous sequence - H.salinarum:262 P.pallidum:262

Q9HSA5              	100.00%		D3B0M1              	100.00%
Bootstrap support for Q9HSA5 as seed ortholog is 100%.
Bootstrap support for D3B0M1 as seed ortholog is 100%.

Group of orthologs #65. Best score 257 bits
Score difference with first non-orthologous sequence - H.salinarum:257 P.pallidum:257

Q9HS71              	100.00%		D3BAS1              	100.00%
Q48290              	14.00%		
Bootstrap support for Q9HS71 as seed ortholog is 100%.
Bootstrap support for D3BAS1 as seed ortholog is 100%.

Group of orthologs #66. Best score 255 bits
Score difference with first non-orthologous sequence - H.salinarum:255 P.pallidum:40

Q9HMJ6              	100.00%		D3BRC2              	100.00%
Bootstrap support for Q9HMJ6 as seed ortholog is 100%.
Bootstrap support for D3BRC2 as seed ortholog is 83%.

Group of orthologs #67. Best score 250 bits
Score difference with first non-orthologous sequence - H.salinarum:250 P.pallidum:250

Q9HRI4              	100.00%		D3BGU1              	100.00%
Bootstrap support for Q9HRI4 as seed ortholog is 100%.
Bootstrap support for D3BGU1 as seed ortholog is 100%.

Group of orthologs #68. Best score 248 bits
Score difference with first non-orthologous sequence - H.salinarum:248 P.pallidum:248

Q9HQL9              	100.00%		D3BQM3              	100.00%
                    	       		D3BDT0              	9.29%
Bootstrap support for Q9HQL9 as seed ortholog is 100%.
Bootstrap support for D3BQM3 as seed ortholog is 100%.

Group of orthologs #69. Best score 248 bits
Score difference with first non-orthologous sequence - H.salinarum:248 P.pallidum:177

Q9HR85              	100.00%		D3BFY9              	100.00%
Bootstrap support for Q9HR85 as seed ortholog is 100%.
Bootstrap support for D3BFY9 as seed ortholog is 100%.

Group of orthologs #70. Best score 246 bits
Score difference with first non-orthologous sequence - H.salinarum:156 P.pallidum:13

Q9HN27              	100.00%		D3B3A5              	100.00%
Bootstrap support for Q9HN27 as seed ortholog is 99%.
Bootstrap support for D3B3A5 as seed ortholog is 73%.
Alternative seed ortholog is D3BKC5 (13 bits away from this cluster)

Group of orthologs #71. Best score 246 bits
Score difference with first non-orthologous sequence - H.salinarum:246 P.pallidum:110

Q9HHN2              	100.00%		D3BJG8              	100.00%
Bootstrap support for Q9HHN2 as seed ortholog is 100%.
Bootstrap support for D3BJG8 as seed ortholog is 94%.

Group of orthologs #72. Best score 240 bits
Score difference with first non-orthologous sequence - H.salinarum:240 P.pallidum:240

Q9HPX2              	100.00%		D3AXR9              	100.00%
Bootstrap support for Q9HPX2 as seed ortholog is 100%.
Bootstrap support for D3AXR9 as seed ortholog is 100%.

Group of orthologs #73. Best score 239 bits
Score difference with first non-orthologous sequence - H.salinarum:239 P.pallidum:239

Q9HQI9              	100.00%		D3BP87              	100.00%
                    	       		D3BH75              	67.20%
Bootstrap support for Q9HQI9 as seed ortholog is 100%.
Bootstrap support for D3BP87 as seed ortholog is 100%.

Group of orthologs #74. Best score 237 bits
Score difference with first non-orthologous sequence - H.salinarum:86 P.pallidum:34

Q9HQ43              	100.00%		D3BND6              	100.00%
Bootstrap support for Q9HQ43 as seed ortholog is 97%.
Bootstrap support for D3BND6 as seed ortholog is 74%.
Alternative seed ortholog is D3BGV3 (34 bits away from this cluster)

Group of orthologs #75. Best score 236 bits
Score difference with first non-orthologous sequence - H.salinarum:236 P.pallidum:236

Q9HS43              	100.00%		D3BI88              	100.00%
Bootstrap support for Q9HS43 as seed ortholog is 100%.
Bootstrap support for D3BI88 as seed ortholog is 100%.

Group of orthologs #76. Best score 234 bits
Score difference with first non-orthologous sequence - H.salinarum:234 P.pallidum:63

O07683              	100.00%		D3BEH3              	100.00%
                    	       		D3BEG7              	7.94%
Bootstrap support for O07683 as seed ortholog is 100%.
Bootstrap support for D3BEH3 as seed ortholog is 91%.

Group of orthologs #77. Best score 232 bits
Score difference with first non-orthologous sequence - H.salinarum:232 P.pallidum:169

Q9HPY4              	100.00%		D3B6A7              	100.00%
Bootstrap support for Q9HPY4 as seed ortholog is 100%.
Bootstrap support for D3B6A7 as seed ortholog is 100%.

Group of orthologs #78. Best score 232 bits
Score difference with first non-orthologous sequence - H.salinarum:232 P.pallidum:155

Q9HST5              	100.00%		D3BLV1              	100.00%
Bootstrap support for Q9HST5 as seed ortholog is 100%.
Bootstrap support for D3BLV1 as seed ortholog is 100%.

Group of orthologs #79. Best score 231 bits
Score difference with first non-orthologous sequence - H.salinarum:231 P.pallidum:155

Q9HNH4              	100.00%		D3BAD3              	100.00%
                    	       		D3BI35              	100.00%
                    	       		D3AVV7              	51.55%
Bootstrap support for Q9HNH4 as seed ortholog is 100%.
Bootstrap support for D3BAD3 as seed ortholog is 99%.
Bootstrap support for D3BI35 as seed ortholog is 99%.

Group of orthologs #80. Best score 229 bits
Score difference with first non-orthologous sequence - H.salinarum:146 P.pallidum:229

Q9HQD6              	100.00%		D3BB71              	100.00%
Bootstrap support for Q9HQD6 as seed ortholog is 99%.
Bootstrap support for D3BB71 as seed ortholog is 100%.

Group of orthologs #81. Best score 228 bits
Score difference with first non-orthologous sequence - H.salinarum:228 P.pallidum:228

Q9HMK4              	100.00%		D3BCX3              	100.00%
Bootstrap support for Q9HMK4 as seed ortholog is 100%.
Bootstrap support for D3BCX3 as seed ortholog is 100%.

Group of orthologs #82. Best score 225 bits
Score difference with first non-orthologous sequence - H.salinarum:225 P.pallidum:145

Q9HN51              	100.00%		D3BNF2              	100.00%
Q9HQE0              	10.43%		
Bootstrap support for Q9HN51 as seed ortholog is 100%.
Bootstrap support for D3BNF2 as seed ortholog is 99%.

Group of orthologs #83. Best score 225 bits
Score difference with first non-orthologous sequence - H.salinarum:225 P.pallidum:225

Q9HPB1              	100.00%		D3B1K5              	100.00%
Bootstrap support for Q9HPB1 as seed ortholog is 100%.
Bootstrap support for D3B1K5 as seed ortholog is 100%.

Group of orthologs #84. Best score 223 bits
Score difference with first non-orthologous sequence - H.salinarum:223 P.pallidum:223

Q9HRX2              	100.00%		D3AZ62              	100.00%
Q9HP92              	17.34%		
Bootstrap support for Q9HRX2 as seed ortholog is 100%.
Bootstrap support for D3AZ62 as seed ortholog is 100%.

Group of orthologs #85. Best score 222 bits
Score difference with first non-orthologous sequence - H.salinarum:134 P.pallidum:31

Q9HNK0              	100.00%		D3B2D6              	100.00%
                    	       		D3AZ71              	20.55%
Bootstrap support for Q9HNK0 as seed ortholog is 99%.
Bootstrap support for D3B2D6 as seed ortholog is 72%.
Alternative seed ortholog is D3B392 (31 bits away from this cluster)

Group of orthologs #86. Best score 217 bits
Score difference with first non-orthologous sequence - H.salinarum:217 P.pallidum:19

Q9HN75              	100.00%		D3BM03              	100.00%
Bootstrap support for Q9HN75 as seed ortholog is 100%.
Bootstrap support for D3BM03 as seed ortholog is 69%.
Alternative seed ortholog is D3BV44 (19 bits away from this cluster)

Group of orthologs #87. Best score 215 bits
Score difference with first non-orthologous sequence - H.salinarum:215 P.pallidum:215

P82854              	100.00%		D3BQ30              	100.00%
O54535              	6.89%		
Bootstrap support for P82854 as seed ortholog is 100%.
Bootstrap support for D3BQ30 as seed ortholog is 100%.

Group of orthologs #88. Best score 215 bits
Score difference with first non-orthologous sequence - H.salinarum:215 P.pallidum:215

Q9HNL6              	100.00%		D3AXJ0              	100.00%
Bootstrap support for Q9HNL6 as seed ortholog is 100%.
Bootstrap support for D3AXJ0 as seed ortholog is 100%.

Group of orthologs #89. Best score 215 bits
Score difference with first non-orthologous sequence - H.salinarum:215 P.pallidum:215

Q9HPX0              	100.00%		D3B6X7              	100.00%
Bootstrap support for Q9HPX0 as seed ortholog is 100%.
Bootstrap support for D3B6X7 as seed ortholog is 100%.

Group of orthologs #90. Best score 214 bits
Score difference with first non-orthologous sequence - H.salinarum:155 P.pallidum:105

Q9HNH6              	100.00%		D3B961              	100.00%
Bootstrap support for Q9HNH6 as seed ortholog is 100%.
Bootstrap support for D3B961 as seed ortholog is 99%.

Group of orthologs #91. Best score 210 bits
Score difference with first non-orthologous sequence - H.salinarum:210 P.pallidum:3

Q9HRY3              	100.00%		D3BEC0              	100.00%
Bootstrap support for Q9HRY3 as seed ortholog is 100%.
Bootstrap support for D3BEC0 as seed ortholog is 50%.
Alternative seed ortholog is D3BLH2 (3 bits away from this cluster)

Group of orthologs #92. Best score 209 bits
Score difference with first non-orthologous sequence - H.salinarum:209 P.pallidum:209

Q9HN77              	100.00%		D3AZG6              	100.00%
Q9HNV6              	15.58%		
Bootstrap support for Q9HN77 as seed ortholog is 100%.
Bootstrap support for D3AZG6 as seed ortholog is 100%.

Group of orthologs #93. Best score 209 bits
Score difference with first non-orthologous sequence - H.salinarum:209 P.pallidum:209

Q9HPD1              	100.00%		D3BFD7              	100.00%
Bootstrap support for Q9HPD1 as seed ortholog is 100%.
Bootstrap support for D3BFD7 as seed ortholog is 100%.

Group of orthologs #94. Best score 208 bits
Score difference with first non-orthologous sequence - H.salinarum:208 P.pallidum:208

Q9HNJ8              	100.00%		D3BEX2              	100.00%
Bootstrap support for Q9HNJ8 as seed ortholog is 100%.
Bootstrap support for D3BEX2 as seed ortholog is 100%.

Group of orthologs #95. Best score 196 bits
Score difference with first non-orthologous sequence - H.salinarum:196 P.pallidum:70

Q9HSM6              	100.00%		D3BFF8              	100.00%
Bootstrap support for Q9HSM6 as seed ortholog is 100%.
Bootstrap support for D3BFF8 as seed ortholog is 95%.

Group of orthologs #96. Best score 196 bits
Score difference with first non-orthologous sequence - H.salinarum:196 P.pallidum:68

Q9HR35              	100.00%		D3BUQ9              	100.00%
Bootstrap support for Q9HR35 as seed ortholog is 100%.
Bootstrap support for D3BUQ9 as seed ortholog is 90%.

Group of orthologs #97. Best score 194 bits
Score difference with first non-orthologous sequence - H.salinarum:91 P.pallidum:94

Q9HMM4              	100.00%		D3BI15              	100.00%
Bootstrap support for Q9HMM4 as seed ortholog is 99%.
Bootstrap support for D3BI15 as seed ortholog is 99%.

Group of orthologs #98. Best score 193 bits
Score difference with first non-orthologous sequence - H.salinarum:193 P.pallidum:80

Q9HR84              	100.00%		D3B773              	100.00%
Q9HR83              	33.40%		
Bootstrap support for Q9HR84 as seed ortholog is 100%.
Bootstrap support for D3B773 as seed ortholog is 96%.

Group of orthologs #99. Best score 192 bits
Score difference with first non-orthologous sequence - H.salinarum:192 P.pallidum:192

Q9HNZ7              	100.00%		D3BK71              	100.00%
Bootstrap support for Q9HNZ7 as seed ortholog is 100%.
Bootstrap support for D3BK71 as seed ortholog is 100%.

Group of orthologs #100. Best score 189 bits
Score difference with first non-orthologous sequence - H.salinarum:189 P.pallidum:189

Q9HNF0              	100.00%		D3AYV1              	100.00%
Bootstrap support for Q9HNF0 as seed ortholog is 100%.
Bootstrap support for D3AYV1 as seed ortholog is 100%.

Group of orthologs #101. Best score 187 bits
Score difference with first non-orthologous sequence - H.salinarum:64 P.pallidum:187

Q9HN66              	100.00%		D3B072              	100.00%
Bootstrap support for Q9HN66 as seed ortholog is 94%.
Bootstrap support for D3B072 as seed ortholog is 100%.

Group of orthologs #102. Best score 185 bits
Score difference with first non-orthologous sequence - H.salinarum:185 P.pallidum:185

Q9HMN3              	100.00%		D3BP70              	100.00%
Bootstrap support for Q9HMN3 as seed ortholog is 100%.
Bootstrap support for D3BP70 as seed ortholog is 100%.

Group of orthologs #103. Best score 185 bits
Score difference with first non-orthologous sequence - H.salinarum:42 P.pallidum:185

Q9HQ70              	100.00%		D3BRT1              	100.00%
Bootstrap support for Q9HQ70 as seed ortholog is 85%.
Bootstrap support for D3BRT1 as seed ortholog is 100%.

Group of orthologs #104. Best score 183 bits
Score difference with first non-orthologous sequence - H.salinarum:94 P.pallidum:183

Q9HN74              	100.00%		D3BD10              	100.00%
Bootstrap support for Q9HN74 as seed ortholog is 98%.
Bootstrap support for D3BD10 as seed ortholog is 100%.

Group of orthologs #105. Best score 183 bits
Score difference with first non-orthologous sequence - H.salinarum:183 P.pallidum:183

Q9HMY5              	100.00%		D3BM56              	100.00%
Bootstrap support for Q9HMY5 as seed ortholog is 100%.
Bootstrap support for D3BM56 as seed ortholog is 100%.

Group of orthologs #106. Best score 182 bits
Score difference with first non-orthologous sequence - H.salinarum:182 P.pallidum:182

Q9HQ67              	100.00%		D3BJB3              	100.00%
Bootstrap support for Q9HQ67 as seed ortholog is 100%.
Bootstrap support for D3BJB3 as seed ortholog is 100%.

Group of orthologs #107. Best score 181 bits
Score difference with first non-orthologous sequence - H.salinarum:181 P.pallidum:181

Q9HPA4              	100.00%		D3AWX0              	100.00%
Bootstrap support for Q9HPA4 as seed ortholog is 100%.
Bootstrap support for D3AWX0 as seed ortholog is 100%.

Group of orthologs #108. Best score 178 bits
Score difference with first non-orthologous sequence - H.salinarum:178 P.pallidum:178

Q9HQJ7              	100.00%		D3B280              	100.00%
                    	       		D3BV53              	24.28%
Bootstrap support for Q9HQJ7 as seed ortholog is 100%.
Bootstrap support for D3B280 as seed ortholog is 100%.

Group of orthologs #109. Best score 178 bits
Score difference with first non-orthologous sequence - H.salinarum:178 P.pallidum:178

Q9HQC9              	100.00%		D3BJV1              	100.00%
Bootstrap support for Q9HQC9 as seed ortholog is 100%.
Bootstrap support for D3BJV1 as seed ortholog is 100%.

Group of orthologs #110. Best score 177 bits
Score difference with first non-orthologous sequence - H.salinarum:177 P.pallidum:177

Q9HN24              	100.00%		D3B824              	100.00%
                    	       		D3B7Q7              	11.81%
Bootstrap support for Q9HN24 as seed ortholog is 100%.
Bootstrap support for D3B824 as seed ortholog is 100%.

Group of orthologs #111. Best score 175 bits
Score difference with first non-orthologous sequence - H.salinarum:175 P.pallidum:175

Q9HSF7              	100.00%		D3BMU1              	100.00%
Q9HHK5              	69.55%		
Q9HSB3              	48.16%		
Q9HR45              	44.92%		
Q9HRE6              	42.76%		
Q9HHH8              	7.56%		
Q9HNA2              	6.48%		
Bootstrap support for Q9HSF7 as seed ortholog is 100%.
Bootstrap support for D3BMU1 as seed ortholog is 100%.

Group of orthologs #112. Best score 174 bits
Score difference with first non-orthologous sequence - H.salinarum:174 P.pallidum:174

Q9HPD4              	100.00%		D3BK20              	100.00%
Bootstrap support for Q9HPD4 as seed ortholog is 100%.
Bootstrap support for D3BK20 as seed ortholog is 100%.

Group of orthologs #113. Best score 174 bits
Score difference with first non-orthologous sequence - H.salinarum:174 P.pallidum:174

Q9HRM0              	100.00%		D3BQU8              	100.00%
Bootstrap support for Q9HRM0 as seed ortholog is 100%.
Bootstrap support for D3BQU8 as seed ortholog is 100%.

Group of orthologs #114. Best score 168 bits
Score difference with first non-orthologous sequence - H.salinarum:168 P.pallidum:168

Q9HHU7              	100.00%		D3AWC2              	100.00%
                    	       		D3BED4              	18.91%
Bootstrap support for Q9HHU7 as seed ortholog is 100%.
Bootstrap support for D3AWC2 as seed ortholog is 100%.

Group of orthologs #115. Best score 168 bits
Score difference with first non-orthologous sequence - H.salinarum:168 P.pallidum:168

Q9HMK3              	100.00%		D3BMN8              	100.00%
Bootstrap support for Q9HMK3 as seed ortholog is 100%.
Bootstrap support for D3BMN8 as seed ortholog is 100%.

Group of orthologs #116. Best score 167 bits
Score difference with first non-orthologous sequence - H.salinarum:167 P.pallidum:167

Q9HPR8              	100.00%		D3BJ28              	100.00%
Bootstrap support for Q9HPR8 as seed ortholog is 100%.
Bootstrap support for D3BJ28 as seed ortholog is 100%.

Group of orthologs #117. Best score 165 bits
Score difference with first non-orthologous sequence - H.salinarum:165 P.pallidum:165

Q9HQH9              	100.00%		D3B5A9              	100.00%
Bootstrap support for Q9HQH9 as seed ortholog is 100%.
Bootstrap support for D3B5A9 as seed ortholog is 100%.

Group of orthologs #118. Best score 165 bits
Score difference with first non-orthologous sequence - H.salinarum:165 P.pallidum:2

P57697              	100.00%		D3BM08              	100.00%
Bootstrap support for P57697 as seed ortholog is 100%.
Bootstrap support for D3BM08 as seed ortholog is 55%.
Alternative seed ortholog is D3BBN6 (2 bits away from this cluster)

Group of orthologs #119. Best score 164 bits
Score difference with first non-orthologous sequence - H.salinarum:164 P.pallidum:164

Q9HS02              	100.00%		D3BR73              	100.00%
                    	       		D3BN01              	11.24%
                    	       		D3B0H8              	10.07%
Bootstrap support for Q9HS02 as seed ortholog is 100%.
Bootstrap support for D3BR73 as seed ortholog is 100%.

Group of orthologs #120. Best score 164 bits
Score difference with first non-orthologous sequence - H.salinarum:51 P.pallidum:164

Q9HT03              	100.00%		D3B7P8              	100.00%
                    	       		D3B0C5              	21.43%
Bootstrap support for Q9HT03 as seed ortholog is 94%.
Bootstrap support for D3B7P8 as seed ortholog is 100%.

Group of orthologs #121. Best score 163 bits
Score difference with first non-orthologous sequence - H.salinarum:163 P.pallidum:163

Q9HNY9              	100.00%		D3BIB6              	100.00%
Bootstrap support for Q9HNY9 as seed ortholog is 100%.
Bootstrap support for D3BIB6 as seed ortholog is 100%.

Group of orthologs #122. Best score 161 bits
Score difference with first non-orthologous sequence - H.salinarum:54 P.pallidum:161

Q9HN85              	100.00%		D3AVZ8              	100.00%
Q9HR19              	8.45%		
Bootstrap support for Q9HN85 as seed ortholog is 85%.
Bootstrap support for D3AVZ8 as seed ortholog is 100%.

Group of orthologs #123. Best score 161 bits
Score difference with first non-orthologous sequence - H.salinarum:161 P.pallidum:161

Q9HN76              	100.00%		D3BCH5              	100.00%
Bootstrap support for Q9HN76 as seed ortholog is 100%.
Bootstrap support for D3BCH5 as seed ortholog is 100%.

Group of orthologs #124. Best score 159 bits
Score difference with first non-orthologous sequence - H.salinarum:159 P.pallidum:51

Q9HRM6              	100.00%		D3AWX8              	100.00%
Q9HRX4              	13.39%		
Q9HQK2              	9.49%		
Bootstrap support for Q9HRM6 as seed ortholog is 100%.
Bootstrap support for D3AWX8 as seed ortholog is 88%.

Group of orthologs #125. Best score 159 bits
Score difference with first non-orthologous sequence - H.salinarum:159 P.pallidum:159

Q9HMU4              	100.00%		D3BUD7              	100.00%
                    	       		D3BKB8              	65.77%
Bootstrap support for Q9HMU4 as seed ortholog is 100%.
Bootstrap support for D3BUD7 as seed ortholog is 100%.

Group of orthologs #126. Best score 159 bits
Score difference with first non-orthologous sequence - H.salinarum:159 P.pallidum:11

Q9HMR0              	100.00%		D3BSP0              	100.00%
Bootstrap support for Q9HMR0 as seed ortholog is 100%.
Bootstrap support for D3BSP0 as seed ortholog is 61%.
Alternative seed ortholog is D3BRT8 (11 bits away from this cluster)

Group of orthologs #127. Best score 156 bits
Score difference with first non-orthologous sequence - H.salinarum:156 P.pallidum:156

Q9HS79              	100.00%		D3B3Z0              	100.00%
Bootstrap support for Q9HS79 as seed ortholog is 100%.
Bootstrap support for D3B3Z0 as seed ortholog is 100%.

Group of orthologs #128. Best score 155 bits
Score difference with first non-orthologous sequence - H.salinarum:155 P.pallidum:155

Q9HS54              	100.00%		D3BR60              	100.00%
                    	       		D3BEC2              	5.00%
Bootstrap support for Q9HS54 as seed ortholog is 100%.
Bootstrap support for D3BR60 as seed ortholog is 100%.

Group of orthologs #129. Best score 155 bits
Score difference with first non-orthologous sequence - H.salinarum:155 P.pallidum:155

Q9HNQ2              	100.00%		D3AY97              	100.00%
Bootstrap support for Q9HNQ2 as seed ortholog is 100%.
Bootstrap support for D3AY97 as seed ortholog is 100%.

Group of orthologs #130. Best score 154 bits
Score difference with first non-orthologous sequence - H.salinarum:154 P.pallidum:154

Q9HPB4              	100.00%		D3B6G8              	100.00%
Bootstrap support for Q9HPB4 as seed ortholog is 100%.
Bootstrap support for D3B6G8 as seed ortholog is 100%.

Group of orthologs #131. Best score 154 bits
Score difference with first non-orthologous sequence - H.salinarum:154 P.pallidum:42

Q9HNP5              	100.00%		D3BHQ1              	100.00%
Bootstrap support for Q9HNP5 as seed ortholog is 100%.
Bootstrap support for D3BHQ1 as seed ortholog is 83%.

Group of orthologs #132. Best score 154 bits
Score difference with first non-orthologous sequence - H.salinarum:154 P.pallidum:154

Q9HPD3              	100.00%		D3BJC7              	100.00%
Bootstrap support for Q9HPD3 as seed ortholog is 100%.
Bootstrap support for D3BJC7 as seed ortholog is 100%.

Group of orthologs #133. Best score 153 bits
Score difference with first non-orthologous sequence - H.salinarum:153 P.pallidum:153

Q9HPJ7              	100.00%		D3B0J0              	100.00%
Bootstrap support for Q9HPJ7 as seed ortholog is 100%.
Bootstrap support for D3B0J0 as seed ortholog is 100%.

Group of orthologs #134. Best score 151 bits
Score difference with first non-orthologous sequence - H.salinarum:151 P.pallidum:87

P61136              	100.00%		D3BJU6              	100.00%
                    	       		D3BL27              	19.48%
Bootstrap support for P61136 as seed ortholog is 100%.
Bootstrap support for D3BJU6 as seed ortholog is 99%.

Group of orthologs #135. Best score 150 bits
Score difference with first non-orthologous sequence - H.salinarum:150 P.pallidum:150

Q9HR62              	100.00%		D3BH05              	100.00%
                    	       		D3BQU2              	11.55%
Bootstrap support for Q9HR62 as seed ortholog is 100%.
Bootstrap support for D3BH05 as seed ortholog is 100%.

Group of orthologs #136. Best score 150 bits
Score difference with first non-orthologous sequence - H.salinarum:150 P.pallidum:150

Q9HND2              	100.00%		D3BP76              	100.00%
Bootstrap support for Q9HND2 as seed ortholog is 100%.
Bootstrap support for D3BP76 as seed ortholog is 100%.

Group of orthologs #137. Best score 149 bits
Score difference with first non-orthologous sequence - H.salinarum:149 P.pallidum:149

Q9HN62              	100.00%		D3BAK8              	100.00%
Bootstrap support for Q9HN62 as seed ortholog is 100%.
Bootstrap support for D3BAK8 as seed ortholog is 100%.

Group of orthologs #138. Best score 149 bits
Score difference with first non-orthologous sequence - H.salinarum:149 P.pallidum:103

Q9HRE8              	100.00%		D3BAC3              	100.00%
Bootstrap support for Q9HRE8 as seed ortholog is 100%.
Bootstrap support for D3BAC3 as seed ortholog is 99%.

Group of orthologs #139. Best score 149 bits
Score difference with first non-orthologous sequence - H.salinarum:149 P.pallidum:21

Q9HP38              	100.00%		D3BKR3              	100.00%
Bootstrap support for Q9HP38 as seed ortholog is 100%.
Bootstrap support for D3BKR3 as seed ortholog is 69%.
Alternative seed ortholog is D3BJC4 (21 bits away from this cluster)

Group of orthologs #140. Best score 149 bits
Score difference with first non-orthologous sequence - H.salinarum:149 P.pallidum:149

Q9HNI2              	100.00%		D3BM59              	100.00%
Bootstrap support for Q9HNI2 as seed ortholog is 100%.
Bootstrap support for D3BM59 as seed ortholog is 100%.

Group of orthologs #141. Best score 149 bits
Score difference with first non-orthologous sequence - H.salinarum:149 P.pallidum:149

Q9HRJ1              	100.00%		D3BM29              	100.00%
Bootstrap support for Q9HRJ1 as seed ortholog is 100%.
Bootstrap support for D3BM29 as seed ortholog is 100%.

Group of orthologs #142. Best score 149 bits
Score difference with first non-orthologous sequence - H.salinarum:149 P.pallidum:59

Q9HRX7              	100.00%		D3BMN0              	100.00%
Bootstrap support for Q9HRX7 as seed ortholog is 100%.
Bootstrap support for D3BMN0 as seed ortholog is 98%.

Group of orthologs #143. Best score 148 bits
Score difference with first non-orthologous sequence - H.salinarum:53 P.pallidum:3

Q9HSR4              	100.00%		D3BHG1              	100.00%
Bootstrap support for Q9HSR4 as seed ortholog is 98%.
Bootstrap support for D3BHG1 as seed ortholog is 49%.
Alternative seed ortholog is D3BPX8 (3 bits away from this cluster)

Group of orthologs #144. Best score 148 bits
Score difference with first non-orthologous sequence - H.salinarum:148 P.pallidum:148

P0CX00              	100.00%		D3BV90              	100.00%
Bootstrap support for P0CX00 as seed ortholog is 100%.
Bootstrap support for D3BV90 as seed ortholog is 100%.

Group of orthologs #145. Best score 148 bits
Score difference with first non-orthologous sequence - H.salinarum:148 P.pallidum:148

Q9HSA2              	100.00%		D3BVF2              	100.00%
Bootstrap support for Q9HSA2 as seed ortholog is 100%.
Bootstrap support for D3BVF2 as seed ortholog is 100%.

Group of orthologs #146. Best score 147 bits
Score difference with first non-orthologous sequence - H.salinarum:147 P.pallidum:40

Q9HRZ2              	100.00%		D3B3P3              	100.00%
Bootstrap support for Q9HRZ2 as seed ortholog is 100%.
Bootstrap support for D3B3P3 as seed ortholog is 84%.

Group of orthologs #147. Best score 147 bits
Score difference with first non-orthologous sequence - H.salinarum:147 P.pallidum:147

Q9HQD1              	100.00%		D3BGD9              	100.00%
Bootstrap support for Q9HQD1 as seed ortholog is 100%.
Bootstrap support for D3BGD9 as seed ortholog is 100%.

Group of orthologs #148. Best score 146 bits
Score difference with first non-orthologous sequence - H.salinarum:72 P.pallidum:39

Q9HS32              	100.00%		D3AYY9              	100.00%
Bootstrap support for Q9HS32 as seed ortholog is 99%.
Bootstrap support for D3AYY9 as seed ortholog is 89%.

Group of orthologs #149. Best score 146 bits
Score difference with first non-orthologous sequence - H.salinarum:146 P.pallidum:146

Q9HSL0              	100.00%		D3BDY0              	100.00%
Bootstrap support for Q9HSL0 as seed ortholog is 100%.
Bootstrap support for D3BDY0 as seed ortholog is 100%.

Group of orthologs #150. Best score 143 bits
Score difference with first non-orthologous sequence - H.salinarum:143 P.pallidum:143

Q9HPJ0              	100.00%		D3BUM9              	100.00%
                    	       		D3AXQ3              	47.97%
Bootstrap support for Q9HPJ0 as seed ortholog is 100%.
Bootstrap support for D3BUM9 as seed ortholog is 100%.

Group of orthologs #151. Best score 143 bits
Score difference with first non-orthologous sequence - H.salinarum:143 P.pallidum:143

Q9HRM8              	100.00%		D3BGD8              	100.00%
Bootstrap support for Q9HRM8 as seed ortholog is 100%.
Bootstrap support for D3BGD8 as seed ortholog is 100%.

Group of orthologs #152. Best score 143 bits
Score difference with first non-orthologous sequence - H.salinarum:143 P.pallidum:143

Q9HN33              	100.00%		D3BKB6              	100.00%
Bootstrap support for Q9HN33 as seed ortholog is 100%.
Bootstrap support for D3BKB6 as seed ortholog is 100%.

Group of orthologs #153. Best score 141 bits
Score difference with first non-orthologous sequence - H.salinarum:141 P.pallidum:141

Q9HRI1              	100.00%		D3AXN0              	100.00%
Bootstrap support for Q9HRI1 as seed ortholog is 100%.
Bootstrap support for D3AXN0 as seed ortholog is 100%.

Group of orthologs #154. Best score 141 bits
Score difference with first non-orthologous sequence - H.salinarum:141 P.pallidum:141

Q9HQ65              	100.00%		D3B0H6              	100.00%
Bootstrap support for Q9HQ65 as seed ortholog is 100%.
Bootstrap support for D3B0H6 as seed ortholog is 100%.

Group of orthologs #155. Best score 140 bits
Score difference with first non-orthologous sequence - H.salinarum:40 P.pallidum:47

Q9HSZ9              	100.00%		D3BCL5              	100.00%
Q9HSZ8              	10.11%		D3AZL0              	11.07%
Bootstrap support for Q9HSZ9 as seed ortholog is 84%.
Bootstrap support for D3BCL5 as seed ortholog is 93%.

Group of orthologs #156. Best score 140 bits
Score difference with first non-orthologous sequence - H.salinarum:140 P.pallidum:140

Q9HMR6              	100.00%		D3AWU9              	100.00%
Bootstrap support for Q9HMR6 as seed ortholog is 100%.
Bootstrap support for D3AWU9 as seed ortholog is 100%.

Group of orthologs #157. Best score 140 bits
Score difference with first non-orthologous sequence - H.salinarum:140 P.pallidum:83

Q9HMG5              	100.00%		D3B6S4              	100.00%
Bootstrap support for Q9HMG5 as seed ortholog is 100%.
Bootstrap support for D3B6S4 as seed ortholog is 99%.

Group of orthologs #158. Best score 139 bits
Score difference with first non-orthologous sequence - H.salinarum:139 P.pallidum:139

Q9HQG0              	100.00%		D3BVG1              	100.00%
Bootstrap support for Q9HQG0 as seed ortholog is 100%.
Bootstrap support for D3BVG1 as seed ortholog is 100%.

Group of orthologs #159. Best score 138 bits
Score difference with first non-orthologous sequence - H.salinarum:138 P.pallidum:138

Q9HQI1              	100.00%		D3B9H8              	100.00%
                    	       		D3B344              	10.67%
Bootstrap support for Q9HQI1 as seed ortholog is 100%.
Bootstrap support for D3B9H8 as seed ortholog is 100%.

Group of orthologs #160. Best score 138 bits
Score difference with first non-orthologous sequence - H.salinarum:138 P.pallidum:32

Q9HMH9              	100.00%		D3BLP5              	100.00%
                    	       		D3B996              	17.75%
Bootstrap support for Q9HMH9 as seed ortholog is 100%.
Bootstrap support for D3BLP5 as seed ortholog is 78%.

Group of orthologs #161. Best score 137 bits
Score difference with first non-orthologous sequence - H.salinarum:58 P.pallidum:9

Q9HS80              	100.00%		D3BQQ0              	100.00%
                    	       		D3BQQ1              	55.99%
                    	       		D3BQP6              	47.00%
                    	       		D3BTG8              	26.50%
Bootstrap support for Q9HS80 as seed ortholog is 98%.
Bootstrap support for D3BQQ0 as seed ortholog is 62%.
Alternative seed ortholog is D3B9L8 (9 bits away from this cluster)

Group of orthologs #162. Best score 136 bits
Score difference with first non-orthologous sequence - H.salinarum:136 P.pallidum:136

Q9HQK6              	100.00%		D3B2J9              	100.00%
Bootstrap support for Q9HQK6 as seed ortholog is 100%.
Bootstrap support for D3B2J9 as seed ortholog is 100%.

Group of orthologs #163. Best score 136 bits
Score difference with first non-orthologous sequence - H.salinarum:136 P.pallidum:136

Q9HMP9              	100.00%		D3B7J9              	100.00%
Bootstrap support for Q9HMP9 as seed ortholog is 100%.
Bootstrap support for D3B7J9 as seed ortholog is 100%.

Group of orthologs #164. Best score 135 bits
Score difference with first non-orthologous sequence - H.salinarum:135 P.pallidum:135

Q9HPN8              	100.00%		D3BAX3              	100.00%
                    	       		D3B6W9              	57.66%
                    	       		D3AZC2              	18.45%
                    	       		D3BBK0              	15.67%
                    	       		D3BP98              	10.12%
Bootstrap support for Q9HPN8 as seed ortholog is 100%.
Bootstrap support for D3BAX3 as seed ortholog is 100%.

Group of orthologs #165. Best score 135 bits
Score difference with first non-orthologous sequence - H.salinarum:135 P.pallidum:59

P09737              	100.00%		D3BU03              	100.00%
P09224              	100.00%		D3BD41              	100.00%
                    	       		D3BD39              	88.61%
Bootstrap support for P09737 as seed ortholog is 100%.
Bootstrap support for P09224 as seed ortholog is 100%.
Bootstrap support for D3BU03 as seed ortholog is 97%.
Bootstrap support for D3BD41 as seed ortholog is 97%.

Group of orthologs #166. Best score 135 bits
Score difference with first non-orthologous sequence - H.salinarum:45 P.pallidum:23

Q9HQ41              	100.00%		D3BHM9              	100.00%
                    	       		D3AXC7              	27.84%
Bootstrap support for Q9HQ41 as seed ortholog is 92%.
Bootstrap support for D3BHM9 as seed ortholog is 79%.

Group of orthologs #167. Best score 135 bits
Score difference with first non-orthologous sequence - H.salinarum:135 P.pallidum:75

Q9HQ27              	100.00%		D3BN56              	100.00%
Bootstrap support for Q9HQ27 as seed ortholog is 100%.
Bootstrap support for D3BN56 as seed ortholog is 98%.

Group of orthologs #168. Best score 134 bits
Score difference with first non-orthologous sequence - H.salinarum:134 P.pallidum:134

Q9HST2              	100.00%		D3BJV5              	100.00%
Q9HST3              	7.29%		
Bootstrap support for Q9HST2 as seed ortholog is 100%.
Bootstrap support for D3BJV5 as seed ortholog is 100%.

Group of orthologs #169. Best score 134 bits
Score difference with first non-orthologous sequence - H.salinarum:134 P.pallidum:134

P57705              	100.00%		D3AVI8              	100.00%
Bootstrap support for P57705 as seed ortholog is 100%.
Bootstrap support for D3AVI8 as seed ortholog is 100%.

Group of orthologs #170. Best score 133 bits
Score difference with first non-orthologous sequence - H.salinarum:133 P.pallidum:27

Q9HS37              	100.00%		D3BHM8              	100.00%
Bootstrap support for Q9HS37 as seed ortholog is 100%.
Bootstrap support for D3BHM8 as seed ortholog is 72%.
Alternative seed ortholog is D3BHN0 (27 bits away from this cluster)

Group of orthologs #171. Best score 131 bits
Score difference with first non-orthologous sequence - H.salinarum:131 P.pallidum:6

Q9HR21              	100.00%		D3BB40              	100.00%
                    	       		D3BGA0              	39.97%
                    	       		D3BG99              	37.23%
Bootstrap support for Q9HR21 as seed ortholog is 100%.
Bootstrap support for D3BB40 as seed ortholog is 56%.
Alternative seed ortholog is D3BQP1 (6 bits away from this cluster)

Group of orthologs #172. Best score 131 bits
Score difference with first non-orthologous sequence - H.salinarum:131 P.pallidum:131

Q9HNB7              	100.00%		D3B846              	100.00%
                    	       		D3BNT8              	15.73%
Bootstrap support for Q9HNB7 as seed ortholog is 100%.
Bootstrap support for D3B846 as seed ortholog is 100%.

Group of orthologs #173. Best score 131 bits
Score difference with first non-orthologous sequence - H.salinarum:131 P.pallidum:131

Q9HSK1              	100.00%		D3AVG7              	100.00%
Bootstrap support for Q9HSK1 as seed ortholog is 100%.
Bootstrap support for D3AVG7 as seed ortholog is 100%.

Group of orthologs #174. Best score 131 bits
Score difference with first non-orthologous sequence - H.salinarum:131 P.pallidum:131

Q9HQR6              	100.00%		D3B8B3              	100.00%
Bootstrap support for Q9HQR6 as seed ortholog is 100%.
Bootstrap support for D3B8B3 as seed ortholog is 100%.

Group of orthologs #175. Best score 131 bits
Score difference with first non-orthologous sequence - H.salinarum:131 P.pallidum:21

Q9HQH1              	100.00%		D3BI40              	100.00%
Bootstrap support for Q9HQH1 as seed ortholog is 100%.
Bootstrap support for D3BI40 as seed ortholog is 70%.
Alternative seed ortholog is D3BVF6 (21 bits away from this cluster)

Group of orthologs #176. Best score 131 bits
Score difference with first non-orthologous sequence - H.salinarum:131 P.pallidum:131

Q9HQ08              	100.00%		D3BKQ8              	100.00%
Bootstrap support for Q9HQ08 as seed ortholog is 100%.
Bootstrap support for D3BKQ8 as seed ortholog is 100%.

Group of orthologs #177. Best score 131 bits
Score difference with first non-orthologous sequence - H.salinarum:131 P.pallidum:131

Q9HMY8              	100.00%		D3BQM5              	100.00%
Bootstrap support for Q9HMY8 as seed ortholog is 100%.
Bootstrap support for D3BQM5 as seed ortholog is 100%.

Group of orthologs #178. Best score 130 bits
Score difference with first non-orthologous sequence - H.salinarum:130 P.pallidum:42

Q9HPA7              	100.00%		D3AY59              	100.00%
                    	       		D3BMQ2              	7.64%
Bootstrap support for Q9HPA7 as seed ortholog is 100%.
Bootstrap support for D3AY59 as seed ortholog is 88%.

Group of orthologs #179. Best score 130 bits
Score difference with first non-orthologous sequence - H.salinarum:130 P.pallidum:130

P0CX01              	100.00%		D3AYQ3              	100.00%
Bootstrap support for P0CX01 as seed ortholog is 100%.
Bootstrap support for D3AYQ3 as seed ortholog is 100%.

Group of orthologs #180. Best score 130 bits
Score difference with first non-orthologous sequence - H.salinarum:130 P.pallidum:6

Q9HN40              	100.00%		D3B9Q4              	100.00%
Bootstrap support for Q9HN40 as seed ortholog is 100%.
Bootstrap support for D3B9Q4 as seed ortholog is 54%.
Alternative seed ortholog is D3B8K6 (6 bits away from this cluster)

Group of orthologs #181. Best score 130 bits
Score difference with first non-orthologous sequence - H.salinarum:130 P.pallidum:130

P57713              	100.00%		D3BRK4              	100.00%
Bootstrap support for P57713 as seed ortholog is 100%.
Bootstrap support for D3BRK4 as seed ortholog is 100%.

Group of orthologs #182. Best score 128 bits
Score difference with first non-orthologous sequence - H.salinarum:128 P.pallidum:128

Q9HPQ4              	100.00%		D3B161              	100.00%
Bootstrap support for Q9HPQ4 as seed ortholog is 100%.
Bootstrap support for D3B161 as seed ortholog is 100%.

Group of orthologs #183. Best score 128 bits
Score difference with first non-orthologous sequence - H.salinarum:128 P.pallidum:128

Q9HHV4              	100.00%		D3BGV8              	100.00%
Bootstrap support for Q9HHV4 as seed ortholog is 100%.
Bootstrap support for D3BGV8 as seed ortholog is 100%.

Group of orthologs #184. Best score 126 bits
Score difference with first non-orthologous sequence - H.salinarum:126 P.pallidum:126

Q9HQJ5              	100.00%		D3B615              	100.00%
Bootstrap support for Q9HQJ5 as seed ortholog is 100%.
Bootstrap support for D3B615 as seed ortholog is 100%.

Group of orthologs #185. Best score 125 bits
Score difference with first non-orthologous sequence - H.salinarum:125 P.pallidum:125

Q9HHP0              	100.00%		D3B3B5              	100.00%
Bootstrap support for Q9HHP0 as seed ortholog is 100%.
Bootstrap support for D3B3B5 as seed ortholog is 100%.

Group of orthologs #186. Best score 123 bits
Score difference with first non-orthologous sequence - H.salinarum:123 P.pallidum:23

Q9HNW6              	100.00%		D3BH42              	100.00%
Bootstrap support for Q9HNW6 as seed ortholog is 100%.
Bootstrap support for D3BH42 as seed ortholog is 77%.

Group of orthologs #187. Best score 123 bits
Score difference with first non-orthologous sequence - H.salinarum:123 P.pallidum:123

Q9HHP2              	100.00%		D3BTG6              	100.00%
Bootstrap support for Q9HHP2 as seed ortholog is 100%.
Bootstrap support for D3BTG6 as seed ortholog is 100%.

Group of orthologs #188. Best score 122 bits
Score difference with first non-orthologous sequence - H.salinarum:122 P.pallidum:122

Q9HPZ3              	100.00%		D3BSZ4              	100.00%
Bootstrap support for Q9HPZ3 as seed ortholog is 100%.
Bootstrap support for D3BSZ4 as seed ortholog is 100%.

Group of orthologs #189. Best score 121 bits
Score difference with first non-orthologous sequence - H.salinarum:121 P.pallidum:59

Q9HQI3              	100.00%		D3BB15              	100.00%
                    	       		D3BIM9              	38.44%
Bootstrap support for Q9HQI3 as seed ortholog is 100%.
Bootstrap support for D3BB15 as seed ortholog is 96%.

Group of orthologs #190. Best score 121 bits
Score difference with first non-orthologous sequence - H.salinarum:121 P.pallidum:121

Q9HND3              	100.00%		D3BTL6              	100.00%
Bootstrap support for Q9HND3 as seed ortholog is 100%.
Bootstrap support for D3BTL6 as seed ortholog is 100%.

Group of orthologs #191. Best score 120 bits
Score difference with first non-orthologous sequence - H.salinarum:120 P.pallidum:120

Q9HSA3              	100.00%		D3B6F1              	100.00%
                    	       		D3BMM3              	18.42%
Bootstrap support for Q9HSA3 as seed ortholog is 100%.
Bootstrap support for D3B6F1 as seed ortholog is 100%.

Group of orthologs #192. Best score 119 bits
Score difference with first non-orthologous sequence - H.salinarum:61 P.pallidum:119

Q9HMS3              	100.00%		D3BJB8              	100.00%
Q9HSW6              	15.51%		
Q9HHJ7              	9.26%		
Q9HHR1              	8.15%		
Q9HQC7              	7.92%		
Bootstrap support for Q9HMS3 as seed ortholog is 74%.
Alternative seed ortholog is O51974 (61 bits away from this cluster)
Bootstrap support for D3BJB8 as seed ortholog is 100%.

Group of orthologs #193. Best score 119 bits
Score difference with first non-orthologous sequence - H.salinarum:119 P.pallidum:10

Q9HP11              	100.00%		D3BL61              	100.00%
Bootstrap support for Q9HP11 as seed ortholog is 100%.
Bootstrap support for D3BL61 as seed ortholog is 39%.
Alternative seed ortholog is D3B4F5 (10 bits away from this cluster)

Group of orthologs #194. Best score 118 bits
Score difference with first non-orthologous sequence - H.salinarum:118 P.pallidum:118

Q9HP07              	100.00%		D3BAC0              	100.00%
Bootstrap support for Q9HP07 as seed ortholog is 100%.
Bootstrap support for D3BAC0 as seed ortholog is 100%.

Group of orthologs #195. Best score 118 bits
Score difference with first non-orthologous sequence - H.salinarum:118 P.pallidum:36

Q9HP03              	100.00%		D3BB47              	100.00%
Bootstrap support for Q9HP03 as seed ortholog is 100%.
Bootstrap support for D3BB47 as seed ortholog is 82%.

Group of orthologs #196. Best score 116 bits
Score difference with first non-orthologous sequence - H.salinarum:116 P.pallidum:116

Q9HPR5              	100.00%		D3AX31              	100.00%
Bootstrap support for Q9HPR5 as seed ortholog is 100%.
Bootstrap support for D3AX31 as seed ortholog is 100%.

Group of orthologs #197. Best score 116 bits
Score difference with first non-orthologous sequence - H.salinarum:116 P.pallidum:116

Q9HR11              	100.00%		D3BEF3              	100.00%
Bootstrap support for Q9HR11 as seed ortholog is 100%.
Bootstrap support for D3BEF3 as seed ortholog is 100%.

Group of orthologs #198. Best score 116 bits
Score difference with first non-orthologous sequence - H.salinarum:116 P.pallidum:116

P50558              	100.00%		D3BTV2              	100.00%
Bootstrap support for P50558 as seed ortholog is 100%.
Bootstrap support for D3BTV2 as seed ortholog is 100%.

Group of orthologs #199. Best score 113 bits
Score difference with first non-orthologous sequence - H.salinarum:43 P.pallidum:113

Q9HMT7              	100.00%		D3B056              	100.00%
Bootstrap support for Q9HMT7 as seed ortholog is 84%.
Bootstrap support for D3B056 as seed ortholog is 100%.

Group of orthologs #200. Best score 113 bits
Score difference with first non-orthologous sequence - H.salinarum:113 P.pallidum:113

Q9HPJ8              	100.00%		D3B1V3              	100.00%
Bootstrap support for Q9HPJ8 as seed ortholog is 100%.
Bootstrap support for D3B1V3 as seed ortholog is 100%.

Group of orthologs #201. Best score 113 bits
Score difference with first non-orthologous sequence - H.salinarum:113 P.pallidum:38

Q9HMB6              	100.00%		D3B4F3              	100.00%
Bootstrap support for Q9HMB6 as seed ortholog is 100%.
Bootstrap support for D3B4F3 as seed ortholog is 84%.

Group of orthologs #202. Best score 113 bits
Score difference with first non-orthologous sequence - H.salinarum:113 P.pallidum:113

Q9HNS4              	100.00%		D3B8W3              	100.00%
Bootstrap support for Q9HNS4 as seed ortholog is 100%.
Bootstrap support for D3B8W3 as seed ortholog is 100%.

Group of orthologs #203. Best score 113 bits
Score difference with first non-orthologous sequence - H.salinarum:113 P.pallidum:113

Q9HHG6              	100.00%		D3BGD1              	100.00%
Bootstrap support for Q9HHG6 as seed ortholog is 100%.
Bootstrap support for D3BGD1 as seed ortholog is 100%.

Group of orthologs #204. Best score 113 bits
Score difference with first non-orthologous sequence - H.salinarum:113 P.pallidum:113

Q9HHR4              	100.00%		D3BJX1              	100.00%
Bootstrap support for Q9HHR4 as seed ortholog is 100%.
Bootstrap support for D3BJX1 as seed ortholog is 100%.

Group of orthologs #205. Best score 112 bits
Score difference with first non-orthologous sequence - H.salinarum:112 P.pallidum:112

Q9HN79              	100.00%		D3BIJ6              	100.00%
Q9HRF2              	10.96%		D3BAX5              	31.24%
Bootstrap support for Q9HN79 as seed ortholog is 100%.
Bootstrap support for D3BIJ6 as seed ortholog is 100%.

Group of orthologs #206. Best score 108 bits
Score difference with first non-orthologous sequence - H.salinarum:108 P.pallidum:19

Q9HSU9              	100.00%		D3BCT5              	100.00%
Q9HSV1              	100.00%		D3BE81              	100.00%
Bootstrap support for Q9HSU9 as seed ortholog is 100%.
Bootstrap support for Q9HSV1 as seed ortholog is 100%.
Bootstrap support for D3BCT5 as seed ortholog is 67%.
Alternative seed ortholog is D3BEA5 (19 bits away from this cluster)
Bootstrap support for D3BE81 as seed ortholog is 59%.
Alternative seed ortholog is D3BEA5 (19 bits away from this cluster)

Group of orthologs #207. Best score 108 bits
Score difference with first non-orthologous sequence - H.salinarum:108 P.pallidum:108

Q9HPP4              	100.00%		D3BVI7              	100.00%
Q9HMK5              	51.85%		
Bootstrap support for Q9HPP4 as seed ortholog is 100%.
Bootstrap support for D3BVI7 as seed ortholog is 100%.

Group of orthologs #208. Best score 108 bits
Score difference with first non-orthologous sequence - H.salinarum:108 P.pallidum:108

P15010              	100.00%		D3B437              	100.00%
Bootstrap support for P15010 as seed ortholog is 100%.
Bootstrap support for D3B437 as seed ortholog is 100%.

Group of orthologs #209. Best score 108 bits
Score difference with first non-orthologous sequence - H.salinarum:47 P.pallidum:61

Q9HQE6              	100.00%		D3B0Z6              	100.00%
Bootstrap support for Q9HQE6 as seed ortholog is 98%.
Bootstrap support for D3B0Z6 as seed ortholog is 99%.

Group of orthologs #210. Best score 108 bits
Score difference with first non-orthologous sequence - H.salinarum:108 P.pallidum:26

O51997              	100.00%		D3BSJ1              	100.00%
Bootstrap support for O51997 as seed ortholog is 100%.
Bootstrap support for D3BSJ1 as seed ortholog is 77%.

Group of orthologs #211. Best score 108 bits
Score difference with first non-orthologous sequence - H.salinarum:108 P.pallidum:108

Q9HSS4              	100.00%		D3BLP0              	100.00%
Bootstrap support for Q9HSS4 as seed ortholog is 100%.
Bootstrap support for D3BLP0 as seed ortholog is 100%.

Group of orthologs #212. Best score 107 bits
Score difference with first non-orthologous sequence - H.salinarum:107 P.pallidum:107

Q9HQJ2              	100.00%		D3BHJ3              	100.00%
Bootstrap support for Q9HQJ2 as seed ortholog is 100%.
Bootstrap support for D3BHJ3 as seed ortholog is 100%.

Group of orthologs #213. Best score 106 bits
Score difference with first non-orthologous sequence - H.salinarum:106 P.pallidum:106

Q9V2W4              	100.00%		D3B1K3              	100.00%
Bootstrap support for Q9V2W4 as seed ortholog is 100%.
Bootstrap support for D3B1K3 as seed ortholog is 100%.

Group of orthologs #214. Best score 104 bits
Score difference with first non-orthologous sequence - H.salinarum:104 P.pallidum:104

O24787              	100.00%		D3BMX5              	100.00%
Bootstrap support for O24787 as seed ortholog is 100%.
Bootstrap support for D3BMX5 as seed ortholog is 100%.

Group of orthologs #215. Best score 103 bits
Score difference with first non-orthologous sequence - H.salinarum:103 P.pallidum:103

Q9HNZ8              	100.00%		D3BK97              	100.00%
Bootstrap support for Q9HNZ8 as seed ortholog is 100%.
Bootstrap support for D3BK97 as seed ortholog is 100%.

Group of orthologs #216. Best score 101 bits
Score difference with first non-orthologous sequence - H.salinarum:101 P.pallidum:53

Q9HP14              	100.00%		D3B760              	100.00%
Q9HR25              	15.38%		
Bootstrap support for Q9HP14 as seed ortholog is 100%.
Bootstrap support for D3B760 as seed ortholog is 94%.

Group of orthologs #217. Best score 101 bits
Score difference with first non-orthologous sequence - H.salinarum:101 P.pallidum:101

P15009              	100.00%		D3BBF0              	100.00%
Bootstrap support for P15009 as seed ortholog is 100%.
Bootstrap support for D3BBF0 as seed ortholog is 100%.

Group of orthologs #218. Best score 101 bits
Score difference with first non-orthologous sequence - H.salinarum:101 P.pallidum:101

Q9HR56              	100.00%		D3B7L1              	100.00%
Bootstrap support for Q9HR56 as seed ortholog is 100%.
Bootstrap support for D3B7L1 as seed ortholog is 100%.

Group of orthologs #219. Best score 100 bits
Score difference with first non-orthologous sequence - H.salinarum:100 P.pallidum:100

Q9HQ24              	100.00%		D3B591              	100.00%
Q9HN71              	6.65%		
Bootstrap support for Q9HQ24 as seed ortholog is 100%.
Bootstrap support for D3B591 as seed ortholog is 100%.

Group of orthologs #220. Best score 100 bits
Score difference with first non-orthologous sequence - H.salinarum:100 P.pallidum:100

Q9HQG3              	100.00%		D3B7T8              	100.00%
Bootstrap support for Q9HQG3 as seed ortholog is 100%.
Bootstrap support for D3B7T8 as seed ortholog is 100%.

Group of orthologs #221. Best score 99 bits
Score difference with first non-orthologous sequence - H.salinarum:99 P.pallidum:99

Q9HSM8              	100.00%		D3B7G7              	100.00%
                    	       		D3B7G4              	42.54%
                    	       		D3B7G5              	39.94%
                    	       		D3B7G6              	29.72%
Bootstrap support for Q9HSM8 as seed ortholog is 100%.
Bootstrap support for D3B7G7 as seed ortholog is 100%.

Group of orthologs #222. Best score 99 bits
Score difference with first non-orthologous sequence - H.salinarum:99 P.pallidum:99

P13553              	100.00%		D3AX76              	100.00%
Bootstrap support for P13553 as seed ortholog is 100%.
Bootstrap support for D3AX76 as seed ortholog is 100%.

Group of orthologs #223. Best score 99 bits
Score difference with first non-orthologous sequence - H.salinarum:99 P.pallidum:99

Q9HQJ6              	100.00%		D3BMH8              	100.00%
Bootstrap support for Q9HQJ6 as seed ortholog is 100%.
Bootstrap support for D3BMH8 as seed ortholog is 100%.

Group of orthologs #224. Best score 98 bits
Score difference with first non-orthologous sequence - H.salinarum:98 P.pallidum:98

Q9HPB6              	100.00%		D3BBQ8              	100.00%
Bootstrap support for Q9HPB6 as seed ortholog is 100%.
Bootstrap support for D3BBQ8 as seed ortholog is 100%.

Group of orthologs #225. Best score 98 bits
Score difference with first non-orthologous sequence - H.salinarum:98 P.pallidum:98

P61414              	100.00%		D3BV55              	100.00%
Bootstrap support for P61414 as seed ortholog is 100%.
Bootstrap support for D3BV55 as seed ortholog is 100%.

Group of orthologs #226. Best score 97 bits
Score difference with first non-orthologous sequence - H.salinarum:97 P.pallidum:97

Q9HNL8              	100.00%		D3BEM8              	100.00%
Bootstrap support for Q9HNL8 as seed ortholog is 100%.
Bootstrap support for D3BEM8 as seed ortholog is 100%.

Group of orthologs #227. Best score 95 bits
Score difference with first non-orthologous sequence - H.salinarum:95 P.pallidum:95

Q9HRL7              	100.00%		D3BDT2              	100.00%
Bootstrap support for Q9HRL7 as seed ortholog is 100%.
Bootstrap support for D3BDT2 as seed ortholog is 100%.

Group of orthologs #228. Best score 95 bits
Score difference with first non-orthologous sequence - H.salinarum:95 P.pallidum:95

Q9HPB8              	100.00%		D3BMQ1              	100.00%
Bootstrap support for Q9HPB8 as seed ortholog is 100%.
Bootstrap support for D3BMQ1 as seed ortholog is 100%.

Group of orthologs #229. Best score 94 bits
Score difference with first non-orthologous sequence - H.salinarum:94 P.pallidum:2

Q9HMW5              	100.00%		D3B3Z5              	100.00%
                    	       		D3BET6              	5.22%
                    	       		D3BK58              	5.02%
Bootstrap support for Q9HMW5 as seed ortholog is 100%.
Bootstrap support for D3B3Z5 as seed ortholog is 76%.

Group of orthologs #230. Best score 93 bits
Score difference with first non-orthologous sequence - H.salinarum:93 P.pallidum:43

Q9HR27              	100.00%		D3BIU0              	100.00%
                    	       		D3BKA7              	25.63%
Bootstrap support for Q9HR27 as seed ortholog is 100%.
Bootstrap support for D3BIU0 as seed ortholog is 82%.

Group of orthologs #231. Best score 93 bits
Score difference with first non-orthologous sequence - H.salinarum:93 P.pallidum:93

Q9HS81              	100.00%		D3AZG0              	100.00%
Bootstrap support for Q9HS81 as seed ortholog is 100%.
Bootstrap support for D3AZG0 as seed ortholog is 100%.

Group of orthologs #232. Best score 92 bits
Score difference with first non-orthologous sequence - H.salinarum:92 P.pallidum:92

O24786              	100.00%		D3AW89              	100.00%
Bootstrap support for O24786 as seed ortholog is 100%.
Bootstrap support for D3AW89 as seed ortholog is 100%.

Group of orthologs #233. Best score 92 bits
Score difference with first non-orthologous sequence - H.salinarum:92 P.pallidum:92

Q9HNE7              	100.00%		D3BCA4              	100.00%
Bootstrap support for Q9HNE7 as seed ortholog is 100%.
Bootstrap support for D3BCA4 as seed ortholog is 100%.

Group of orthologs #234. Best score 92 bits
Score difference with first non-orthologous sequence - H.salinarum:92 P.pallidum:92

P50562              	100.00%		D3BER0              	100.00%
Bootstrap support for P50562 as seed ortholog is 100%.
Bootstrap support for D3BER0 as seed ortholog is 100%.

Group of orthologs #235. Best score 91 bits
Score difference with first non-orthologous sequence - H.salinarum:91 P.pallidum:91

Q9HQN6              	100.00%		D3B358              	100.00%
Bootstrap support for Q9HQN6 as seed ortholog is 100%.
Bootstrap support for D3B358 as seed ortholog is 100%.

Group of orthologs #236. Best score 91 bits
Score difference with first non-orthologous sequence - H.salinarum:21 P.pallidum:48

O46709              	100.00%		D3BAT7              	100.00%
Bootstrap support for O46709 as seed ortholog is 84%.
Bootstrap support for D3BAT7 as seed ortholog is 98%.

Group of orthologs #237. Best score 90 bits
Score difference with first non-orthologous sequence - H.salinarum:90 P.pallidum:90

Q9HPJ4              	100.00%		D3B2R5              	100.00%
Bootstrap support for Q9HPJ4 as seed ortholog is 100%.
Bootstrap support for D3B2R5 as seed ortholog is 100%.

Group of orthologs #238. Best score 90 bits
Score difference with first non-orthologous sequence - H.salinarum:90 P.pallidum:90

Q9HMR1              	100.00%		D3BIC8              	100.00%
Bootstrap support for Q9HMR1 as seed ortholog is 100%.
Bootstrap support for D3BIC8 as seed ortholog is 100%.

Group of orthologs #239. Best score 88 bits
Score difference with first non-orthologous sequence - H.salinarum:88 P.pallidum:25

Q9HSP7              	100.00%		D3AZM1              	100.00%
Bootstrap support for Q9HSP7 as seed ortholog is 100%.
Bootstrap support for D3AZM1 as seed ortholog is 79%.

Group of orthologs #240. Best score 87 bits
Score difference with first non-orthologous sequence - H.salinarum:87 P.pallidum:87

Q9HNT1              	100.00%		D3AXY2              	100.00%
                    	       		D3BE34              	14.14%
Bootstrap support for Q9HNT1 as seed ortholog is 100%.
Bootstrap support for D3AXY2 as seed ortholog is 100%.

Group of orthologs #241. Best score 87 bits
Score difference with first non-orthologous sequence - H.salinarum:87 P.pallidum:87

Q9HND8              	100.00%		D3BUD3              	100.00%
                    	       		D3BUC4              	62.33%
Bootstrap support for Q9HND8 as seed ortholog is 100%.
Bootstrap support for D3BUD3 as seed ortholog is 100%.

Group of orthologs #242. Best score 87 bits
Score difference with first non-orthologous sequence - H.salinarum:87 P.pallidum:7

Q9HR36              	100.00%		D3B0N9              	100.00%
Bootstrap support for Q9HR36 as seed ortholog is 100%.
Bootstrap support for D3B0N9 as seed ortholog is 60%.
Alternative seed ortholog is D3B6G7 (7 bits away from this cluster)

Group of orthologs #243. Best score 87 bits
Score difference with first non-orthologous sequence - H.salinarum:87 P.pallidum:5

Q9HP48              	100.00%		D3B4D7              	100.00%
Bootstrap support for Q9HP48 as seed ortholog is 100%.
Bootstrap support for D3B4D7 as seed ortholog is 60%.
Alternative seed ortholog is D3BHW4 (5 bits away from this cluster)

Group of orthologs #244. Best score 87 bits
Score difference with first non-orthologous sequence - H.salinarum:87 P.pallidum:87

Q9HR24              	100.00%		D3B4F8              	100.00%
Bootstrap support for Q9HR24 as seed ortholog is 100%.
Bootstrap support for D3B4F8 as seed ortholog is 100%.

Group of orthologs #245. Best score 87 bits
Score difference with first non-orthologous sequence - H.salinarum:87 P.pallidum:87

Q9HRA2              	100.00%		D3BBQ0              	100.00%
Bootstrap support for Q9HRA2 as seed ortholog is 100%.
Bootstrap support for D3BBQ0 as seed ortholog is 100%.

Group of orthologs #246. Best score 87 bits
Score difference with first non-orthologous sequence - H.salinarum:87 P.pallidum:87

Q9HNH7              	100.00%		D3BM32              	100.00%
Bootstrap support for Q9HNH7 as seed ortholog is 100%.
Bootstrap support for D3BM32 as seed ortholog is 100%.

Group of orthologs #247. Best score 85 bits
Score difference with first non-orthologous sequence - H.salinarum:85 P.pallidum:85

P13575              	100.00%		D3BAC7              	100.00%
Bootstrap support for P13575 as seed ortholog is 100%.
Bootstrap support for D3BAC7 as seed ortholog is 100%.

Group of orthologs #248. Best score 85 bits
Score difference with first non-orthologous sequence - H.salinarum:85 P.pallidum:85

Q9HP06              	100.00%		D3BM80              	100.00%
Bootstrap support for Q9HP06 as seed ortholog is 100%.
Bootstrap support for D3BM80 as seed ortholog is 100%.

Group of orthologs #249. Best score 84 bits
Score difference with first non-orthologous sequence - H.salinarum:84 P.pallidum:84

Q9HRT2              	100.00%		D3B7L3              	100.00%
Bootstrap support for Q9HRT2 as seed ortholog is 100%.
Bootstrap support for D3B7L3 as seed ortholog is 100%.

Group of orthologs #250. Best score 84 bits
Score difference with first non-orthologous sequence - H.salinarum:84 P.pallidum:84

Q9HQ12              	100.00%		D3BM60              	100.00%
Bootstrap support for Q9HQ12 as seed ortholog is 100%.
Bootstrap support for D3BM60 as seed ortholog is 100%.

Group of orthologs #251. Best score 83 bits
Score difference with first non-orthologous sequence - H.salinarum:36 P.pallidum:83

Q9HQY5              	100.00%		D3AWE7              	100.00%
Q9HNF1              	15.38%		
Bootstrap support for Q9HQY5 as seed ortholog is 85%.
Bootstrap support for D3AWE7 as seed ortholog is 100%.

Group of orthologs #252. Best score 83 bits
Score difference with first non-orthologous sequence - H.salinarum:83 P.pallidum:27

Q9HSG3              	100.00%		D3B676              	100.00%
Bootstrap support for Q9HSG3 as seed ortholog is 100%.
Bootstrap support for D3B676 as seed ortholog is 87%.

Group of orthologs #253. Best score 82 bits
Score difference with first non-orthologous sequence - H.salinarum:82 P.pallidum:82

Q9HRZ3              	100.00%		D3B4P2              	100.00%
Bootstrap support for Q9HRZ3 as seed ortholog is 100%.
Bootstrap support for D3B4P2 as seed ortholog is 100%.

Group of orthologs #254. Best score 82 bits
Score difference with first non-orthologous sequence - H.salinarum:82 P.pallidum:82

Q9HRI5              	100.00%		D3BCX8              	100.00%
Bootstrap support for Q9HRI5 as seed ortholog is 100%.
Bootstrap support for D3BCX8 as seed ortholog is 100%.

Group of orthologs #255. Best score 81 bits
Score difference with first non-orthologous sequence - H.salinarum:81 P.pallidum:81

Q9HPN7              	100.00%		D3B3Q3              	100.00%
                    	       		D3AW80              	26.18%
Bootstrap support for Q9HPN7 as seed ortholog is 100%.
Bootstrap support for D3B3Q3 as seed ortholog is 100%.

Group of orthologs #256. Best score 81 bits
Score difference with first non-orthologous sequence - H.salinarum:81 P.pallidum:81

P48854              	100.00%		D3B9Y5              	100.00%
Bootstrap support for P48854 as seed ortholog is 100%.
Bootstrap support for D3B9Y5 as seed ortholog is 100%.

Group of orthologs #257. Best score 81 bits
Score difference with first non-orthologous sequence - H.salinarum:81 P.pallidum:81

Q9HPQ9              	100.00%		D3BG91              	100.00%
Bootstrap support for Q9HPQ9 as seed ortholog is 100%.
Bootstrap support for D3BG91 as seed ortholog is 100%.

Group of orthologs #258. Best score 80 bits
Score difference with first non-orthologous sequence - H.salinarum:80 P.pallidum:80

Q9HQJ4              	100.00%		D3AXW3              	100.00%
                    	       		D3B3A4              	11.97%
Bootstrap support for Q9HQJ4 as seed ortholog is 100%.
Bootstrap support for D3AXW3 as seed ortholog is 100%.

Group of orthologs #259. Best score 80 bits
Score difference with first non-orthologous sequence - H.salinarum:80 P.pallidum:80

Q9HQ87              	100.00%		D3B9B9              	100.00%
Bootstrap support for Q9HQ87 as seed ortholog is 100%.
Bootstrap support for D3B9B9 as seed ortholog is 100%.

Group of orthologs #260. Best score 79 bits
Score difference with first non-orthologous sequence - H.salinarum:79 P.pallidum:79

Q9HQR8              	100.00%		D3BH57              	100.00%
                    	       		D3BJZ1              	44.42%
Bootstrap support for Q9HQR8 as seed ortholog is 100%.
Bootstrap support for D3BH57 as seed ortholog is 100%.

Group of orthologs #261. Best score 78 bits
Score difference with first non-orthologous sequence - H.salinarum:78 P.pallidum:78

Q9HQD7              	100.00%		D3BL89              	100.00%
Bootstrap support for Q9HQD7 as seed ortholog is 100%.
Bootstrap support for D3BL89 as seed ortholog is 100%.

Group of orthologs #262. Best score 77 bits
Score difference with first non-orthologous sequence - H.salinarum:77 P.pallidum:77

Q9HN64              	100.00%		D3B6S2              	100.00%
Q9HP87              	46.03%		
Bootstrap support for Q9HN64 as seed ortholog is 100%.
Bootstrap support for D3B6S2 as seed ortholog is 100%.

Group of orthologs #263. Best score 77 bits
Score difference with first non-orthologous sequence - H.salinarum:77 P.pallidum:77

Q9HMD2              	100.00%		D3BPW7              	100.00%
Bootstrap support for Q9HMD2 as seed ortholog is 100%.
Bootstrap support for D3BPW7 as seed ortholog is 100%.

Group of orthologs #264. Best score 77 bits
Score difference with first non-orthologous sequence - H.salinarum:77 P.pallidum:77

Q9HP25              	100.00%		D3BT07              	100.00%
Bootstrap support for Q9HP25 as seed ortholog is 100%.
Bootstrap support for D3BT07 as seed ortholog is 100%.

Group of orthologs #265. Best score 76 bits
Score difference with first non-orthologous sequence - H.salinarum:4 P.pallidum:76

Q9HRJ6              	100.00%		D3B677              	100.00%
Q9HRH8              	17.58%		D3B1K0              	31.81%
Q9HMU8              	14.26%		D3BLC1              	18.06%
Q9HRZ9              	13.09%		
Q9HNY3              	11.13%		
Q9HNZ9              	10.74%		
Q9HMZ4              	10.35%		
Q9HMG1              	9.57%		
Q9HR06              	8.98%		
Q9HMG6              	8.01%		
Q9HMT3              	7.81%		
Q9HHR7              	7.62%		
Q9HPH7              	6.84%		
Q9HNI8              	5.08%		
Bootstrap support for Q9HRJ6 as seed ortholog is 56%.
Alternative seed ortholog is Q9HHQ5 (4 bits away from this cluster)
Bootstrap support for D3B677 as seed ortholog is 100%.

Group of orthologs #266. Best score 76 bits
Score difference with first non-orthologous sequence - H.salinarum:76 P.pallidum:76

Q9HHE9              	100.00%		D3BM88              	100.00%
Q9HN56              	100.00%		
Q48325              	85.61%		
O52018              	72.98%		
O52004              	23.51%		
Bootstrap support for Q9HHE9 as seed ortholog is 100%.
Bootstrap support for Q9HN56 as seed ortholog is 100%.
Bootstrap support for D3BM88 as seed ortholog is 100%.

Group of orthologs #267. Best score 76 bits
Score difference with first non-orthologous sequence - H.salinarum:76 P.pallidum:76

Q9HN05              	100.00%		D3B1H2              	100.00%
Bootstrap support for Q9HN05 as seed ortholog is 100%.
Bootstrap support for D3B1H2 as seed ortholog is 100%.

Group of orthologs #268. Best score 74 bits
Score difference with first non-orthologous sequence - H.salinarum:74 P.pallidum:74

Q9HQB3              	100.00%		D3BGF1              	100.00%
Q9HSL5              	19.04%		
Bootstrap support for Q9HQB3 as seed ortholog is 100%.
Bootstrap support for D3BGF1 as seed ortholog is 100%.

Group of orthologs #269. Best score 74 bits
Score difference with first non-orthologous sequence - H.salinarum:74 P.pallidum:74

Q9HS35              	100.00%		D3BPL5              	100.00%
Bootstrap support for Q9HS35 as seed ortholog is 100%.
Bootstrap support for D3BPL5 as seed ortholog is 100%.

Group of orthologs #270. Best score 73 bits
Score difference with first non-orthologous sequence - H.salinarum:73 P.pallidum:3

Q9HPP2              	100.00%		D3AW88              	100.00%
Bootstrap support for Q9HPP2 as seed ortholog is 100%.
Bootstrap support for D3AW88 as seed ortholog is 55%.
Alternative seed ortholog is D3BR72 (3 bits away from this cluster)

Group of orthologs #271. Best score 73 bits
Score difference with first non-orthologous sequence - H.salinarum:73 P.pallidum:73

Q9HQI5              	100.00%		D3BU45              	100.00%
Bootstrap support for Q9HQI5 as seed ortholog is 100%.
Bootstrap support for D3BU45 as seed ortholog is 100%.

Group of orthologs #272. Best score 72 bits
Score difference with first non-orthologous sequence - H.salinarum:72 P.pallidum:72

Q9HQZ3              	100.00%		D3BSH6              	100.00%
                    	       		D3BLP1              	20.04%
Bootstrap support for Q9HQZ3 as seed ortholog is 100%.
Bootstrap support for D3BSH6 as seed ortholog is 100%.

Group of orthologs #273. Best score 72 bits
Score difference with first non-orthologous sequence - H.salinarum:72 P.pallidum:72

Q9HRD3              	100.00%		D3B0V7              	100.00%
Bootstrap support for Q9HRD3 as seed ortholog is 100%.
Bootstrap support for D3B0V7 as seed ortholog is 100%.

Group of orthologs #274. Best score 72 bits
Score difference with first non-orthologous sequence - H.salinarum:72 P.pallidum:72

P15008              	100.00%		D3BQU5              	100.00%
Bootstrap support for P15008 as seed ortholog is 100%.
Bootstrap support for D3BQU5 as seed ortholog is 100%.

Group of orthologs #275. Best score 71 bits
Score difference with first non-orthologous sequence - H.salinarum:71 P.pallidum:71

Q9HS15              	100.00%		D3AXK3              	100.00%
Bootstrap support for Q9HS15 as seed ortholog is 100%.
Bootstrap support for D3AXK3 as seed ortholog is 100%.

Group of orthologs #276. Best score 71 bits
Score difference with first non-orthologous sequence - H.salinarum:71 P.pallidum:71

Q9HPC2              	100.00%		D3BCZ8              	100.00%
Bootstrap support for Q9HPC2 as seed ortholog is 100%.
Bootstrap support for D3BCZ8 as seed ortholog is 100%.

Group of orthologs #277. Best score 71 bits
Score difference with first non-orthologous sequence - H.salinarum:71 P.pallidum:71

Q9HNX7              	100.00%		D3BED2              	100.00%
Bootstrap support for Q9HNX7 as seed ortholog is 100%.
Bootstrap support for D3BED2 as seed ortholog is 100%.

Group of orthologs #278. Best score 70 bits
Score difference with first non-orthologous sequence - H.salinarum:70 P.pallidum:70

Q9HQI6              	100.00%		D3B2F2              	100.00%
Bootstrap support for Q9HQI6 as seed ortholog is 100%.
Bootstrap support for D3B2F2 as seed ortholog is 100%.

Group of orthologs #279. Best score 70 bits
Score difference with first non-orthologous sequence - H.salinarum:70 P.pallidum:70

Q9HRY0              	100.00%		D3BP66              	100.00%
Bootstrap support for Q9HRY0 as seed ortholog is 100%.
Bootstrap support for D3BP66 as seed ortholog is 100%.

Group of orthologs #280. Best score 69 bits
Score difference with first non-orthologous sequence - H.salinarum:69 P.pallidum:69

Q9HRA5              	100.00%		D3BEH6              	100.00%
Bootstrap support for Q9HRA5 as seed ortholog is 100%.
Bootstrap support for D3BEH6 as seed ortholog is 100%.

Group of orthologs #281. Best score 69 bits
Score difference with first non-orthologous sequence - H.salinarum:69 P.pallidum:69

Q9HS60              	100.00%		D3BEM9              	100.00%
Bootstrap support for Q9HS60 as seed ortholog is 100%.
Bootstrap support for D3BEM9 as seed ortholog is 100%.

Group of orthologs #282. Best score 69 bits
Score difference with first non-orthologous sequence - H.salinarum:69 P.pallidum:69

Q9HS82              	100.00%		D3BV52              	100.00%
Bootstrap support for Q9HS82 as seed ortholog is 100%.
Bootstrap support for D3BV52 as seed ortholog is 100%.

Group of orthologs #283. Best score 68 bits
Score difference with first non-orthologous sequence - H.salinarum:68 P.pallidum:68

Q9HRF6              	100.00%		D3B632              	100.00%
                    	       		D3BP59              	7.47%
Bootstrap support for Q9HRF6 as seed ortholog is 100%.
Bootstrap support for D3B632 as seed ortholog is 100%.

Group of orthologs #284. Best score 68 bits
Score difference with first non-orthologous sequence - H.salinarum:68 P.pallidum:68

Q9HSG8              	100.00%		D3BIL1              	100.00%
Bootstrap support for Q9HSG8 as seed ortholog is 100%.
Bootstrap support for D3BIL1 as seed ortholog is 100%.

Group of orthologs #285. Best score 68 bits
Score difference with first non-orthologous sequence - H.salinarum:68 P.pallidum:68

Q9HQ90              	100.00%		D3BMU4              	100.00%
Bootstrap support for Q9HQ90 as seed ortholog is 100%.
Bootstrap support for D3BMU4 as seed ortholog is 100%.

Group of orthologs #286. Best score 67 bits
Score difference with first non-orthologous sequence - H.salinarum:67 P.pallidum:67

Q9HNK3              	100.00%		D3BEQ8              	100.00%
Bootstrap support for Q9HNK3 as seed ortholog is 100%.
Bootstrap support for D3BEQ8 as seed ortholog is 100%.

Group of orthologs #287. Best score 67 bits
Score difference with first non-orthologous sequence - H.salinarum:67 P.pallidum:67

Q9HN88              	100.00%		D3BTS5              	100.00%
Bootstrap support for Q9HN88 as seed ortholog is 100%.
Bootstrap support for D3BTS5 as seed ortholog is 100%.

Group of orthologs #288. Best score 66 bits
Score difference with first non-orthologous sequence - H.salinarum:66 P.pallidum:66

Q9HR81              	100.00%		D3B4X6              	100.00%
Bootstrap support for Q9HR81 as seed ortholog is 100%.
Bootstrap support for D3B4X6 as seed ortholog is 100%.

Group of orthologs #289. Best score 66 bits
Score difference with first non-orthologous sequence - H.salinarum:66 P.pallidum:66

Q9HNR4              	100.00%		D3BG94              	100.00%
Bootstrap support for Q9HNR4 as seed ortholog is 100%.
Bootstrap support for D3BG94 as seed ortholog is 100%.

Group of orthologs #290. Best score 65 bits
Score difference with first non-orthologous sequence - H.salinarum:65 P.pallidum:65

Q9HNF8              	100.00%		D3BSA4              	100.00%
Q9HS64              	9.28%		
Bootstrap support for Q9HNF8 as seed ortholog is 100%.
Bootstrap support for D3BSA4 as seed ortholog is 100%.

Group of orthologs #291. Best score 64 bits
Score difference with first non-orthologous sequence - H.salinarum:64 P.pallidum:64

Q9HP66              	100.00%		D3B5E3              	100.00%
                    	       		D3BSB5              	48.51%
Bootstrap support for Q9HP66 as seed ortholog is 100%.
Bootstrap support for D3B5E3 as seed ortholog is 100%.

Group of orthologs #292. Best score 64 bits
Score difference with first non-orthologous sequence - H.salinarum:64 P.pallidum:64

Q9HQH8              	100.00%		D3BJB1              	100.00%
                    	       		D3BR79              	5.13%
Bootstrap support for Q9HQH8 as seed ortholog is 100%.
Bootstrap support for D3BJB1 as seed ortholog is 100%.

Group of orthologs #293. Best score 64 bits
Score difference with first non-orthologous sequence - H.salinarum:64 P.pallidum:64

Q9HMK6              	100.00%		D3BR85              	100.00%
Bootstrap support for Q9HMK6 as seed ortholog is 100%.
Bootstrap support for D3BR85 as seed ortholog is 100%.

Group of orthologs #294. Best score 64 bits
Score difference with first non-orthologous sequence - H.salinarum:64 P.pallidum:64

Q9HQL7              	100.00%		D3BQH4              	100.00%
Bootstrap support for Q9HQL7 as seed ortholog is 100%.
Bootstrap support for D3BQH4 as seed ortholog is 100%.

Group of orthologs #295. Best score 63 bits
Score difference with first non-orthologous sequence - H.salinarum:63 P.pallidum:13

Q9HNV3              	100.00%		D3BP95              	100.00%
Q9HML4              	6.25%		
Bootstrap support for Q9HNV3 as seed ortholog is 100%.
Bootstrap support for D3BP95 as seed ortholog is 60%.
Alternative seed ortholog is D3B2F4 (13 bits away from this cluster)

Group of orthologs #296. Best score 63 bits
Score difference with first non-orthologous sequence - H.salinarum:63 P.pallidum:63

Q9HNP3              	100.00%		D3BM22              	100.00%
Bootstrap support for Q9HNP3 as seed ortholog is 100%.
Bootstrap support for D3BM22 as seed ortholog is 100%.

Group of orthologs #297. Best score 63 bits
Score difference with first non-orthologous sequence - H.salinarum:63 P.pallidum:63

Q9HN45              	100.00%		D3BSY5              	100.00%
Bootstrap support for Q9HN45 as seed ortholog is 100%.
Bootstrap support for D3BSY5 as seed ortholog is 100%.

Group of orthologs #298. Best score 62 bits
Score difference with first non-orthologous sequence - H.salinarum:62 P.pallidum:62

Q9HMV8              	100.00%		D3BR71              	100.00%
                    	       		D3B7L8              	43.69%
                    	       		D3BQC7              	39.75%
Bootstrap support for Q9HMV8 as seed ortholog is 100%.
Bootstrap support for D3BR71 as seed ortholog is 100%.

Group of orthologs #299. Best score 62 bits
Score difference with first non-orthologous sequence - H.salinarum:62 P.pallidum:10

Q9HHV6              	100.00%		D3B501              	100.00%
                    	       		D3BII4              	43.31%
Bootstrap support for Q9HHV6 as seed ortholog is 100%.
Bootstrap support for D3B501 as seed ortholog is 63%.
Alternative seed ortholog is D3B7E2 (10 bits away from this cluster)

Group of orthologs #300. Best score 62 bits
Score difference with first non-orthologous sequence - H.salinarum:62 P.pallidum:62

Q9HQS1              	100.00%		D3B3B6              	100.00%
Bootstrap support for Q9HQS1 as seed ortholog is 100%.
Bootstrap support for D3B3B6 as seed ortholog is 100%.

Group of orthologs #301. Best score 62 bits
Score difference with first non-orthologous sequence - H.salinarum:62 P.pallidum:62

Q9HMM5              	100.00%		D3BKX3              	100.00%
Bootstrap support for Q9HMM5 as seed ortholog is 100%.
Bootstrap support for D3BKX3 as seed ortholog is 100%.

Group of orthologs #302. Best score 61 bits
Score difference with first non-orthologous sequence - H.salinarum:61 P.pallidum:10

Q9HP50              	100.00%		D3B692              	100.00%
                    	       		D3B689              	85.98%
                    	       		D3B687              	85.71%
                    	       		D3BTX0              	83.07%
                    	       		D3BHK6              	30.42%
Bootstrap support for Q9HP50 as seed ortholog is 100%.
Bootstrap support for D3B692 as seed ortholog is 59%.
Alternative seed ortholog is D3B498 (10 bits away from this cluster)

Group of orthologs #303. Best score 60 bits
Score difference with first non-orthologous sequence - H.salinarum:60 P.pallidum:9

Q9HP40              	100.00%		D3BND0              	100.00%
Bootstrap support for Q9HP40 as seed ortholog is 100%.
Bootstrap support for D3BND0 as seed ortholog is 59%.
Alternative seed ortholog is D3AY40 (9 bits away from this cluster)

Group of orthologs #304. Best score 57 bits
Score difference with first non-orthologous sequence - H.salinarum:57 P.pallidum:57

Q9HS24              	100.00%		D3AW13              	100.00%
Bootstrap support for Q9HS24 as seed ortholog is 100%.
Bootstrap support for D3AW13 as seed ortholog is 100%.

Group of orthologs #305. Best score 57 bits
Score difference with first non-orthologous sequence - H.salinarum:57 P.pallidum:57

Q9HR41              	100.00%		D3B608              	100.00%
Bootstrap support for Q9HR41 as seed ortholog is 100%.
Bootstrap support for D3B608 as seed ortholog is 100%.

Group of orthologs #306. Best score 57 bits
Score difference with first non-orthologous sequence - H.salinarum:57 P.pallidum:57

Q9HRG3              	100.00%		D3BEC4              	100.00%
Bootstrap support for Q9HRG3 as seed ortholog is 100%.
Bootstrap support for D3BEC4 as seed ortholog is 100%.

Group of orthologs #307. Best score 57 bits
Score difference with first non-orthologous sequence - H.salinarum:57 P.pallidum:15

Q9HPZ8              	100.00%		D3BMY5              	100.00%
Bootstrap support for Q9HPZ8 as seed ortholog is 100%.
Bootstrap support for D3BMY5 as seed ortholog is 71%.
Alternative seed ortholog is D3B991 (15 bits away from this cluster)

Group of orthologs #308. Best score 56 bits
Score difference with first non-orthologous sequence - H.salinarum:56 P.pallidum:56

Q9HPH9              	100.00%		D3BPZ9              	100.00%
Q9HQU7              	57.33%		
Q9HNN3              	6.75%		
Bootstrap support for Q9HPH9 as seed ortholog is 100%.
Bootstrap support for D3BPZ9 as seed ortholog is 100%.

Group of orthologs #309. Best score 56 bits
Score difference with first non-orthologous sequence - H.salinarum:56 P.pallidum:56

Q9HRT8              	100.00%		D3AZF5              	100.00%
Bootstrap support for Q9HRT8 as seed ortholog is 100%.
Bootstrap support for D3AZF5 as seed ortholog is 100%.

Group of orthologs #310. Best score 56 bits
Score difference with first non-orthologous sequence - H.salinarum:56 P.pallidum:56

Q9HMH5              	100.00%		D3BMW8              	100.00%
Bootstrap support for Q9HMH5 as seed ortholog is 100%.
Bootstrap support for D3BMW8 as seed ortholog is 100%.

Group of orthologs #311. Best score 56 bits
Score difference with first non-orthologous sequence - H.salinarum:56 P.pallidum:56

Q9HNQ6              	100.00%		D3BPW9              	100.00%
Bootstrap support for Q9HNQ6 as seed ortholog is 100%.
Bootstrap support for D3BPW9 as seed ortholog is 100%.

Group of orthologs #312. Best score 56 bits
Score difference with first non-orthologous sequence - H.salinarum:56 P.pallidum:56

Q9HNP2              	100.00%		D3BTV9              	100.00%
Bootstrap support for Q9HNP2 as seed ortholog is 100%.
Bootstrap support for D3BTV9 as seed ortholog is 100%.

Group of orthologs #313. Best score 55 bits
Score difference with first non-orthologous sequence - H.salinarum:55 P.pallidum:55

Q9HQC0              	100.00%		D3BGF6              	100.00%
                    	       		D3AZS9              	23.56%
Bootstrap support for Q9HQC0 as seed ortholog is 100%.
Bootstrap support for D3BGF6 as seed ortholog is 100%.

Group of orthologs #314. Best score 55 bits
Score difference with first non-orthologous sequence - H.salinarum:55 P.pallidum:55

Q9HRU3              	100.00%		D3BH26              	100.00%
                    	       		D3BL05              	28.70%
Bootstrap support for Q9HRU3 as seed ortholog is 100%.
Bootstrap support for D3BH26 as seed ortholog is 100%.

Group of orthologs #315. Best score 54 bits
Score difference with first non-orthologous sequence - H.salinarum:54 P.pallidum:54

Q9HSV2              	100.00%		D3BF15              	100.00%
Q9HRP9              	12.22%		
Bootstrap support for Q9HSV2 as seed ortholog is 100%.
Bootstrap support for D3BF15 as seed ortholog is 100%.

Group of orthologs #316. Best score 54 bits
Score difference with first non-orthologous sequence - H.salinarum:54 P.pallidum:2

Q9HNA0              	100.00%		D3BMR8              	100.00%
Bootstrap support for Q9HNA0 as seed ortholog is 100%.
Bootstrap support for D3BMR8 as seed ortholog is 51%.
Alternative seed ortholog is D3BAZ9 (2 bits away from this cluster)

Group of orthologs #317. Best score 53 bits
Score difference with first non-orthologous sequence - H.salinarum:53 P.pallidum:53

P05969              	100.00%		D3BPW6              	100.00%
Bootstrap support for P05969 as seed ortholog is 100%.
Bootstrap support for D3BPW6 as seed ortholog is 100%.

Group of orthologs #318. Best score 53 bits
Score difference with first non-orthologous sequence - H.salinarum:53 P.pallidum:53

Q9HP73              	100.00%		D3BN13              	100.00%
Bootstrap support for Q9HP73 as seed ortholog is 100%.
Bootstrap support for D3BN13 as seed ortholog is 100%.

Group of orthologs #319. Best score 52 bits
Score difference with first non-orthologous sequence - H.salinarum:52 P.pallidum:52

F2Z6H5              	100.00%		D3B3Q2              	100.00%
Bootstrap support for F2Z6H5 as seed ortholog is 100%.
Bootstrap support for D3B3Q2 as seed ortholog is 100%.

Group of orthologs #320. Best score 52 bits
Score difference with first non-orthologous sequence - H.salinarum:52 P.pallidum:52

Q9HR64              	100.00%		D3B3L9              	100.00%
Bootstrap support for Q9HR64 as seed ortholog is 100%.
Bootstrap support for D3B3L9 as seed ortholog is 100%.

Group of orthologs #321. Best score 52 bits
Score difference with first non-orthologous sequence - H.salinarum:52 P.pallidum:52

Q9HST1              	100.00%		D3BB09              	100.00%
Bootstrap support for Q9HST1 as seed ortholog is 100%.
Bootstrap support for D3BB09 as seed ortholog is 100%.

Group of orthologs #322. Best score 52 bits
Score difference with first non-orthologous sequence - H.salinarum:52 P.pallidum:52

Q9HQH3              	100.00%		D3BR47              	100.00%
Bootstrap support for Q9HQH3 as seed ortholog is 100%.
Bootstrap support for D3BR47 as seed ortholog is 100%.

Group of orthologs #323. Best score 49 bits
Score difference with first non-orthologous sequence - H.salinarum:49 P.pallidum:49

Q9HQP4              	100.00%		D3B6Y1              	100.00%
Q9HQP8              	26.75%		
Bootstrap support for Q9HQP4 as seed ortholog is 100%.
Bootstrap support for D3B6Y1 as seed ortholog is 100%.

Group of orthologs #324. Best score 49 bits
Score difference with first non-orthologous sequence - H.salinarum:49 P.pallidum:49

Q9HND1              	100.00%		D3BIH8              	100.00%
Bootstrap support for Q9HND1 as seed ortholog is 100%.
Bootstrap support for D3BIH8 as seed ortholog is 100%.

Group of orthologs #325. Best score 48 bits
Score difference with first non-orthologous sequence - H.salinarum:48 P.pallidum:48

Q9HPC3              	100.00%		D3AVM9              	100.00%
Bootstrap support for Q9HPC3 as seed ortholog is 100%.
Bootstrap support for D3AVM9 as seed ortholog is 100%.

Group of orthologs #326. Best score 45 bits
Score difference with first non-orthologous sequence - H.salinarum:45 P.pallidum:45

Q9HMF0              	100.00%		D3B439              	100.00%
Bootstrap support for Q9HMF0 as seed ortholog is 100%.
Bootstrap support for D3B439 as seed ortholog is 100%.

Group of orthologs #327. Best score 45 bits
Score difference with first non-orthologous sequence - H.salinarum:45 P.pallidum:45

Q9HPC0              	100.00%		D3B2B2              	100.00%
Bootstrap support for Q9HPC0 as seed ortholog is 100%.
Bootstrap support for D3B2B2 as seed ortholog is 100%.

Group of orthologs #328. Best score 44 bits
Score difference with first non-orthologous sequence - H.salinarum:44 P.pallidum:44

Q9HMT2              	100.00%		D3B0G1              	100.00%
Q9HR63              	100.00%		
Bootstrap support for Q9HMT2 as seed ortholog is 100%.
Bootstrap support for Q9HR63 as seed ortholog is 100%.
Bootstrap support for D3B0G1 as seed ortholog is 100%.

Group of orthologs #329. Best score 42 bits
Score difference with first non-orthologous sequence - H.salinarum:42 P.pallidum:42

Q9HNJ3              	100.00%		D3B9L9              	100.00%
Q9HMZ2              	20.41%		D3BNV7              	5.00%
Q9HRY6              	11.83%		
Bootstrap support for Q9HNJ3 as seed ortholog is 100%.
Bootstrap support for D3B9L9 as seed ortholog is 100%.

Group of orthologs #330. Best score 42 bits
Score difference with first non-orthologous sequence - H.salinarum:42 P.pallidum:42

Q9V2W0              	100.00%		D3BBP3              	100.00%
Bootstrap support for Q9V2W0 as seed ortholog is 100%.
Bootstrap support for D3BBP3 as seed ortholog is 100%.

Group of orthologs #331. Best score 42 bits
Score difference with first non-orthologous sequence - H.salinarum:42 P.pallidum:42

Q9HPS2              	100.00%		D3BUE2              	100.00%
Bootstrap support for Q9HPS2 as seed ortholog is 100%.
Bootstrap support for D3BUE2 as seed ortholog is 100%.

Group of orthologs #332. Best score 40 bits
Score difference with first non-orthologous sequence - H.salinarum:40 P.pallidum:40

Q9HRF9              	100.00%		D3B604              	100.00%
                    	       		D3BA43              	6.27%
Bootstrap support for Q9HRF9 as seed ortholog is 100%.
Bootstrap support for D3B604 as seed ortholog is 100%.