###################################
225 groups of orthologs
285 in-paralogs from H.salinarum
268 in-paralogs from P.knowlesi
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 629 bits
Score difference with first non-orthologous sequence - H.salinarum:629 P.knowlesi:629

Q9HP43              	100.00%		B3LBP4              	100.00%
Bootstrap support for Q9HP43 as seed ortholog is 100%.
Bootstrap support for B3LBP4 as seed ortholog is 100%.

Group of orthologs #2. Best score 606 bits
Score difference with first non-orthologous sequence - H.salinarum:297 P.knowlesi:413

Q9HPU1              	100.00%		B3L7L4              	100.00%
Q9HHW2              	43.71%		
Q9HPF0              	17.89%		
Bootstrap support for Q9HPU1 as seed ortholog is 100%.
Bootstrap support for B3L7L4 as seed ortholog is 100%.

Group of orthologs #3. Best score 583 bits
Score difference with first non-orthologous sequence - H.salinarum:583 P.knowlesi:87

Q9HRY2              	100.00%		B3L5E9              	100.00%
Bootstrap support for Q9HRY2 as seed ortholog is 100%.
Bootstrap support for B3L5E9 as seed ortholog is 97%.

Group of orthologs #4. Best score 516 bits
Score difference with first non-orthologous sequence - H.salinarum:516 P.knowlesi:402

Q9HNE4              	100.00%		B3KZZ1              	100.00%
Bootstrap support for Q9HNE4 as seed ortholog is 100%.
Bootstrap support for B3KZZ1 as seed ortholog is 100%.

Group of orthologs #5. Best score 513 bits
Score difference with first non-orthologous sequence - H.salinarum:513 P.knowlesi:400

Q9HNE3              	100.00%		B3LBT4              	100.00%
Bootstrap support for Q9HNE3 as seed ortholog is 100%.
Bootstrap support for B3LBT4 as seed ortholog is 100%.

Group of orthologs #6. Best score 507 bits
Score difference with first non-orthologous sequence - H.salinarum:507 P.knowlesi:507

P0CX03              	100.00%		B3L0J5              	100.00%
                    	       		B3LB54              	7.39%
Bootstrap support for P0CX03 as seed ortholog is 100%.
Bootstrap support for B3L0J5 as seed ortholog is 100%.

Group of orthologs #7. Best score 468 bits
Score difference with first non-orthologous sequence - H.salinarum:468 P.knowlesi:377

Q9HMC1              	100.00%		B3L6T7              	100.00%
Bootstrap support for Q9HMC1 as seed ortholog is 100%.
Bootstrap support for B3L6T7 as seed ortholog is 100%.

Group of orthologs #8. Best score 461 bits
Score difference with first non-orthologous sequence - H.salinarum:143 P.knowlesi:461

Q9HQU8              	100.00%		B3L7C9              	100.00%
Bootstrap support for Q9HQU8 as seed ortholog is 99%.
Bootstrap support for B3L7C9 as seed ortholog is 100%.

Group of orthologs #9. Best score 459 bits
Score difference with first non-orthologous sequence - H.salinarum:335 P.knowlesi:459

Q9HMU3              	100.00%		B3LBC1              	100.00%
Bootstrap support for Q9HMU3 as seed ortholog is 100%.
Bootstrap support for B3LBC1 as seed ortholog is 100%.

Group of orthologs #10. Best score 423 bits
Score difference with first non-orthologous sequence - H.salinarum:328 P.knowlesi:151

Q9HM89              	100.00%		B3L753              	100.00%
Bootstrap support for Q9HM89 as seed ortholog is 100%.
Bootstrap support for B3L753 as seed ortholog is 99%.

Group of orthologs #11. Best score 409 bits
Score difference with first non-orthologous sequence - H.salinarum:409 P.knowlesi:409

Q9HP27              	100.00%		B3L565              	100.00%
Bootstrap support for Q9HP27 as seed ortholog is 100%.
Bootstrap support for B3L565 as seed ortholog is 100%.

Group of orthologs #12. Best score 406 bits
Score difference with first non-orthologous sequence - H.salinarum:406 P.knowlesi:406

Q9HP32              	100.00%		B3LAR4              	100.00%
Bootstrap support for Q9HP32 as seed ortholog is 100%.
Bootstrap support for B3LAR4 as seed ortholog is 100%.

Group of orthologs #13. Best score 399 bits
Score difference with first non-orthologous sequence - H.salinarum:256 P.knowlesi:399

Q9HQ66              	100.00%		B3L2B2              	100.00%
Bootstrap support for Q9HQ66 as seed ortholog is 100%.
Bootstrap support for B3L2B2 as seed ortholog is 100%.

Group of orthologs #14. Best score 394 bits
Score difference with first non-orthologous sequence - H.salinarum:394 P.knowlesi:309

Q9HN97              	100.00%		B3L8Q4              	100.00%
Bootstrap support for Q9HN97 as seed ortholog is 100%.
Bootstrap support for B3L8Q4 as seed ortholog is 100%.

Group of orthologs #15. Best score 380 bits
Score difference with first non-orthologous sequence - H.salinarum:380 P.knowlesi:124

Q9HM85              	100.00%		B3L9Q6              	100.00%
Bootstrap support for Q9HM85 as seed ortholog is 100%.
Bootstrap support for B3L9Q6 as seed ortholog is 99%.

Group of orthologs #16. Best score 376 bits
Score difference with first non-orthologous sequence - H.salinarum:376 P.knowlesi:376

Q9HS52              	100.00%		B3LCD4              	100.00%
Bootstrap support for Q9HS52 as seed ortholog is 100%.
Bootstrap support for B3LCD4 as seed ortholog is 100%.

Group of orthologs #17. Best score 375 bits
Score difference with first non-orthologous sequence - H.salinarum:375 P.knowlesi:276

Q9HPV7              	100.00%		B3L4K9              	100.00%
Bootstrap support for Q9HPV7 as seed ortholog is 100%.
Bootstrap support for B3L4K9 as seed ortholog is 100%.

Group of orthologs #18. Best score 359 bits
Score difference with first non-orthologous sequence - H.salinarum:359 P.knowlesi:359

Q9HNQ2              	100.00%		B3L7Y7              	100.00%
Bootstrap support for Q9HNQ2 as seed ortholog is 100%.
Bootstrap support for B3L7Y7 as seed ortholog is 100%.

Group of orthologs #19. Best score 350 bits
Score difference with first non-orthologous sequence - H.salinarum:350 P.knowlesi:350

Q9HNS5              	100.00%		B3L878              	100.00%
Bootstrap support for Q9HNS5 as seed ortholog is 100%.
Bootstrap support for B3L878 as seed ortholog is 100%.

Group of orthologs #20. Best score 344 bits
Score difference with first non-orthologous sequence - H.salinarum:344 P.knowlesi:3

Q9HN70              	100.00%		B3L402              	100.00%
Q9HNI0              	33.74%		
Bootstrap support for Q9HN70 as seed ortholog is 100%.
Bootstrap support for B3L402 as seed ortholog is 52%.
Alternative seed ortholog is B3L746 (3 bits away from this cluster)

Group of orthologs #21. Best score 344 bits
Score difference with first non-orthologous sequence - H.salinarum:344 P.knowlesi:236

Q9HNK9              	100.00%		B3LAR0              	100.00%
Bootstrap support for Q9HNK9 as seed ortholog is 100%.
Bootstrap support for B3LAR0 as seed ortholog is 100%.

Group of orthologs #22. Best score 336 bits
Score difference with first non-orthologous sequence - H.salinarum:336 P.knowlesi:336

Q9HR30              	100.00%		B3LD45              	100.00%
Bootstrap support for Q9HR30 as seed ortholog is 100%.
Bootstrap support for B3LD45 as seed ortholog is 100%.

Group of orthologs #23. Best score 327 bits
Score difference with first non-orthologous sequence - H.salinarum:149 P.knowlesi:18

Q9HRW6              	100.00%		B3L3L7              	100.00%
Q9HNP9              	35.56%		B3L1F4              	8.81%
Bootstrap support for Q9HRW6 as seed ortholog is 100%.
Bootstrap support for B3L3L7 as seed ortholog is 68%.
Alternative seed ortholog is B3L5B0 (18 bits away from this cluster)

Group of orthologs #24. Best score 326 bits
Score difference with first non-orthologous sequence - H.salinarum:326 P.knowlesi:326

Q9HMW7              	100.00%		B3LAH4              	100.00%
Bootstrap support for Q9HMW7 as seed ortholog is 100%.
Bootstrap support for B3LAH4 as seed ortholog is 100%.

Group of orthologs #25. Best score 315 bits
Score difference with first non-orthologous sequence - H.salinarum:315 P.knowlesi:315

Q9HN72              	100.00%		B3L108              	100.00%
Bootstrap support for Q9HN72 as seed ortholog is 100%.
Bootstrap support for B3L108 as seed ortholog is 100%.

Group of orthologs #26. Best score 307 bits
Score difference with first non-orthologous sequence - H.salinarum:307 P.knowlesi:307

Q9HN78              	100.00%		B3L8F2              	100.00%
Bootstrap support for Q9HN78 as seed ortholog is 100%.
Bootstrap support for B3L8F2 as seed ortholog is 100%.

Group of orthologs #27. Best score 307 bits
Score difference with first non-orthologous sequence - H.salinarum:307 P.knowlesi:8

Q9HNA5              	100.00%		B3LBY6              	100.00%
Bootstrap support for Q9HNA5 as seed ortholog is 100%.
Bootstrap support for B3LBY6 as seed ortholog is 60%.
Alternative seed ortholog is B3KZ01 (8 bits away from this cluster)

Group of orthologs #28. Best score 302 bits
Score difference with first non-orthologous sequence - H.salinarum:302 P.knowlesi:302

Q9HT00              	100.00%		B3L212              	100.00%
Bootstrap support for Q9HT00 as seed ortholog is 100%.
Bootstrap support for B3L212 as seed ortholog is 100%.

Group of orthologs #29. Best score 298 bits
Score difference with first non-orthologous sequence - H.salinarum:298 P.knowlesi:142

Q9HMG9              	100.00%		B3L9E5              	100.00%
Bootstrap support for Q9HMG9 as seed ortholog is 100%.
Bootstrap support for B3L9E5 as seed ortholog is 98%.

Group of orthologs #30. Best score 289 bits
Score difference with first non-orthologous sequence - H.salinarum:289 P.knowlesi:289

Q9HS42              	100.00%		B3L0T5              	100.00%
Bootstrap support for Q9HS42 as seed ortholog is 100%.
Bootstrap support for B3L0T5 as seed ortholog is 100%.

Group of orthologs #31. Best score 285 bits
Score difference with first non-orthologous sequence - H.salinarum:285 P.knowlesi:285

Q9HP57              	100.00%		B3L7J6              	100.00%
Bootstrap support for Q9HP57 as seed ortholog is 100%.
Bootstrap support for B3L7J6 as seed ortholog is 100%.

Group of orthologs #32. Best score 280 bits
Score difference with first non-orthologous sequence - H.salinarum:280 P.knowlesi:38

Q9HSA5              	100.00%		B3L7D9              	100.00%
Bootstrap support for Q9HSA5 as seed ortholog is 100%.
Bootstrap support for B3L7D9 as seed ortholog is 85%.

Group of orthologs #33. Best score 276 bits
Score difference with first non-orthologous sequence - H.salinarum:140 P.knowlesi:276

Q9HMN5              	100.00%		B3L9R6              	100.00%
Bootstrap support for Q9HMN5 as seed ortholog is 99%.
Bootstrap support for B3L9R6 as seed ortholog is 100%.

Group of orthologs #34. Best score 273 bits
Score difference with first non-orthologous sequence - H.salinarum:273 P.knowlesi:273

Q9HPY5              	100.00%		B3LD11              	100.00%
Bootstrap support for Q9HPY5 as seed ortholog is 100%.
Bootstrap support for B3LD11 as seed ortholog is 100%.

Group of orthologs #35. Best score 270 bits
Score difference with first non-orthologous sequence - H.salinarum:270 P.knowlesi:270

Q9HQM6              	100.00%		B3L781              	100.00%
Bootstrap support for Q9HQM6 as seed ortholog is 100%.
Bootstrap support for B3L781 as seed ortholog is 100%.

Group of orthologs #36. Best score 262 bits
Score difference with first non-orthologous sequence - H.salinarum:162 P.knowlesi:67

Q9HS95              	100.00%		B3LC00              	100.00%
Bootstrap support for Q9HS95 as seed ortholog is 99%.
Bootstrap support for B3LC00 as seed ortholog is 95%.

Group of orthologs #37. Best score 259 bits
Score difference with first non-orthologous sequence - H.salinarum:259 P.knowlesi:259

P17103              	100.00%		B3L619              	100.00%
                    	       		B3L733              	31.28%
Bootstrap support for P17103 as seed ortholog is 100%.
Bootstrap support for B3L619 as seed ortholog is 100%.

Group of orthologs #38. Best score 258 bits
Score difference with first non-orthologous sequence - H.salinarum:258 P.knowlesi:258

Q9HPP0              	100.00%		B3L4N7              	100.00%
Bootstrap support for Q9HPP0 as seed ortholog is 100%.
Bootstrap support for B3L4N7 as seed ortholog is 100%.

Group of orthologs #39. Best score 251 bits
Score difference with first non-orthologous sequence - H.salinarum:182 P.knowlesi:88

Q9HN74              	100.00%		B3LCW5              	100.00%
Bootstrap support for Q9HN74 as seed ortholog is 99%.
Bootstrap support for B3LCW5 as seed ortholog is 90%.

Group of orthologs #40. Best score 245 bits
Score difference with first non-orthologous sequence - H.salinarum:245 P.knowlesi:245

Q9HPR3              	100.00%		B3LCR8              	100.00%
Bootstrap support for Q9HPR3 as seed ortholog is 100%.
Bootstrap support for B3LCR8 as seed ortholog is 100%.

Group of orthologs #41. Best score 244 bits
Score difference with first non-orthologous sequence - H.salinarum:244 P.knowlesi:71

Q9HN76              	100.00%		B3L6M4              	100.00%
Bootstrap support for Q9HN76 as seed ortholog is 100%.
Bootstrap support for B3L6M4 as seed ortholog is 98%.

Group of orthologs #42. Best score 239 bits
Score difference with first non-orthologous sequence - H.salinarum:239 P.knowlesi:239

Q9HQI9              	100.00%		B3L3V4              	100.00%
Bootstrap support for Q9HQI9 as seed ortholog is 100%.
Bootstrap support for B3L3V4 as seed ortholog is 100%.

Group of orthologs #43. Best score 236 bits
Score difference with first non-orthologous sequence - H.salinarum:236 P.knowlesi:236

Q9HR29              	100.00%		B3LCM1              	100.00%
Bootstrap support for Q9HR29 as seed ortholog is 100%.
Bootstrap support for B3LCM1 as seed ortholog is 100%.

Group of orthologs #44. Best score 234 bits
Score difference with first non-orthologous sequence - H.salinarum:234 P.knowlesi:234

Q9HRH2              	100.00%		B3L359              	100.00%
Q9HN90              	12.26%		
Q9HSN5              	11.42%		
Bootstrap support for Q9HRH2 as seed ortholog is 100%.
Bootstrap support for B3L359 as seed ortholog is 100%.

Group of orthologs #45. Best score 233 bits
Score difference with first non-orthologous sequence - H.salinarum:233 P.knowlesi:233

Q9HP33              	100.00%		B3L3R6              	100.00%
Bootstrap support for Q9HP33 as seed ortholog is 100%.
Bootstrap support for B3L3R6 as seed ortholog is 100%.

Group of orthologs #46. Best score 233 bits
Score difference with first non-orthologous sequence - H.salinarum:233 P.knowlesi:233

Q9HQZ0              	100.00%		B3LBB6              	100.00%
Bootstrap support for Q9HQZ0 as seed ortholog is 100%.
Bootstrap support for B3LBB6 as seed ortholog is 100%.

Group of orthologs #47. Best score 230 bits
Score difference with first non-orthologous sequence - H.salinarum:145 P.knowlesi:4

Q9HN27              	100.00%		B3L1L0              	100.00%
                    	       		B3L992              	99.77%
Bootstrap support for Q9HN27 as seed ortholog is 99%.
Bootstrap support for B3L1L0 as seed ortholog is 47%.
Alternative seed ortholog is B3L9C8 (4 bits away from this cluster)

Group of orthologs #48. Best score 228 bits
Score difference with first non-orthologous sequence - H.salinarum:228 P.knowlesi:228

Q9HQU4              	100.00%		B3L2M5              	100.00%
Bootstrap support for Q9HQU4 as seed ortholog is 100%.
Bootstrap support for B3L2M5 as seed ortholog is 100%.

Group of orthologs #49. Best score 227 bits
Score difference with first non-orthologous sequence - H.salinarum:227 P.knowlesi:227

Q9HSM2              	100.00%		B3L6L5              	100.00%
Q9HSL6              	27.93%		
Bootstrap support for Q9HSM2 as seed ortholog is 100%.
Bootstrap support for B3L6L5 as seed ortholog is 100%.

Group of orthologs #50. Best score 220 bits
Score difference with first non-orthologous sequence - H.salinarum:220 P.knowlesi:220

Q9HN50              	100.00%		B3L654              	100.00%
Bootstrap support for Q9HN50 as seed ortholog is 100%.
Bootstrap support for B3L654 as seed ortholog is 100%.

Group of orthologs #51. Best score 219 bits
Score difference with first non-orthologous sequence - H.salinarum:219 P.knowlesi:219

Q9HPB1              	100.00%		B3L8D7              	100.00%
Bootstrap support for Q9HPB1 as seed ortholog is 100%.
Bootstrap support for B3L8D7 as seed ortholog is 100%.

Group of orthologs #52. Best score 218 bits
Score difference with first non-orthologous sequence - H.salinarum:129 P.knowlesi:218

Q9HMM4              	100.00%		B3L1D8              	100.00%
                    	       		B3L4M7              	13.79%
Bootstrap support for Q9HMM4 as seed ortholog is 99%.
Bootstrap support for B3L1D8 as seed ortholog is 100%.

Group of orthologs #53. Best score 209 bits
Score difference with first non-orthologous sequence - H.salinarum:107 P.knowlesi:209

Q9HHN4              	100.00%		B3L8F0              	100.00%
Bootstrap support for Q9HHN4 as seed ortholog is 99%.
Bootstrap support for B3L8F0 as seed ortholog is 100%.

Group of orthologs #54. Best score 208 bits
Score difference with first non-orthologous sequence - H.salinarum:124 P.knowlesi:208

Q9HN66              	100.00%		B3L8M2              	100.00%
Bootstrap support for Q9HN66 as seed ortholog is 99%.
Bootstrap support for B3L8M2 as seed ortholog is 100%.

Group of orthologs #55. Best score 205 bits
Score difference with first non-orthologous sequence - H.salinarum:205 P.knowlesi:98

Q9HPD1              	100.00%		B3L699              	100.00%
Bootstrap support for Q9HPD1 as seed ortholog is 100%.
Bootstrap support for B3L699 as seed ortholog is 99%.

Group of orthologs #56. Best score 202 bits
Score difference with first non-orthologous sequence - H.salinarum:202 P.knowlesi:202

Q9HMK4              	100.00%		B3KZH9              	100.00%
Bootstrap support for Q9HMK4 as seed ortholog is 100%.
Bootstrap support for B3KZH9 as seed ortholog is 100%.

Group of orthologs #57. Best score 200 bits
Score difference with first non-orthologous sequence - H.salinarum:200 P.knowlesi:200

Q9HPX2              	100.00%		B3LAN9              	100.00%
Bootstrap support for Q9HPX2 as seed ortholog is 100%.
Bootstrap support for B3LAN9 as seed ortholog is 100%.

Group of orthologs #58. Best score 199 bits
Score difference with first non-orthologous sequence - H.salinarum:199 P.knowlesi:75

Q9HN77              	100.00%		B3LBU1              	100.00%
Q9HNV6              	16.87%		
Bootstrap support for Q9HN77 as seed ortholog is 100%.
Bootstrap support for B3LBU1 as seed ortholog is 97%.

Group of orthologs #59. Best score 198 bits
Score difference with first non-orthologous sequence - H.salinarum:198 P.knowlesi:101

O07683              	100.00%		B3KZP7              	100.00%
Bootstrap support for O07683 as seed ortholog is 100%.
Bootstrap support for B3KZP7 as seed ortholog is 97%.

Group of orthologs #60. Best score 192 bits
Score difference with first non-orthologous sequence - H.salinarum:192 P.knowlesi:43

Q9HRY3              	100.00%		B3L024              	100.00%
Bootstrap support for Q9HRY3 as seed ortholog is 100%.
Bootstrap support for B3L024 as seed ortholog is 83%.

Group of orthologs #61. Best score 191 bits
Score difference with first non-orthologous sequence - H.salinarum:191 P.knowlesi:191

Q9HR35              	100.00%		B3LBK2              	100.00%
Bootstrap support for Q9HR35 as seed ortholog is 100%.
Bootstrap support for B3LBK2 as seed ortholog is 100%.

Group of orthologs #62. Best score 190 bits
Score difference with first non-orthologous sequence - H.salinarum:190 P.knowlesi:190

Q9HPP1              	100.00%		B3LA75              	100.00%
Bootstrap support for Q9HPP1 as seed ortholog is 100%.
Bootstrap support for B3LA75 as seed ortholog is 100%.

Group of orthologs #63. Best score 188 bits
Score difference with first non-orthologous sequence - H.salinarum:188 P.knowlesi:188

Q9HQE1              	100.00%		B3LA84              	100.00%
Q9HRM7              	100.00%		B3LAJ5              	47.85%
Q9HSM4              	36.02%		
Bootstrap support for Q9HQE1 as seed ortholog is 100%.
Bootstrap support for Q9HRM7 as seed ortholog is 100%.
Bootstrap support for B3LA84 as seed ortholog is 100%.

Group of orthologs #64. Best score 188 bits
Score difference with first non-orthologous sequence - H.salinarum:188 P.knowlesi:188

Q9HRV7              	100.00%		B3LAN0              	100.00%
Bootstrap support for Q9HRV7 as seed ortholog is 100%.
Bootstrap support for B3LAN0 as seed ortholog is 100%.

Group of orthologs #65. Best score 186 bits
Score difference with first non-orthologous sequence - H.salinarum:186 P.knowlesi:186

Q9HMK2              	100.00%		B3L830              	100.00%
Bootstrap support for Q9HMK2 as seed ortholog is 100%.
Bootstrap support for B3L830 as seed ortholog is 100%.

Group of orthologs #66. Best score 185 bits
Score difference with first non-orthologous sequence - H.salinarum:185 P.knowlesi:185

Q9HNB7              	100.00%		B3L4L9              	100.00%
Bootstrap support for Q9HNB7 as seed ortholog is 100%.
Bootstrap support for B3L4L9 as seed ortholog is 100%.

Group of orthologs #67. Best score 185 bits
Score difference with first non-orthologous sequence - H.salinarum:185 P.knowlesi:185

Q9HQJ7              	100.00%		B3L594              	100.00%
Bootstrap support for Q9HQJ7 as seed ortholog is 100%.
Bootstrap support for B3L594 as seed ortholog is 100%.

Group of orthologs #68. Best score 184 bits
Score difference with first non-orthologous sequence - H.salinarum:105 P.knowlesi:184

Q9HNK0              	100.00%		B3L611              	100.00%
                    	       		B3LCZ9              	12.31%
Bootstrap support for Q9HNK0 as seed ortholog is 98%.
Bootstrap support for B3L611 as seed ortholog is 100%.

Group of orthologs #69. Best score 184 bits
Score difference with first non-orthologous sequence - H.salinarum:184 P.knowlesi:14

Q9HNJ8              	100.00%		B3L070              	100.00%
Bootstrap support for Q9HNJ8 as seed ortholog is 100%.
Bootstrap support for B3L070 as seed ortholog is 59%.
Alternative seed ortholog is B3LCF4 (14 bits away from this cluster)

Group of orthologs #70. Best score 184 bits
Score difference with first non-orthologous sequence - H.salinarum:184 P.knowlesi:184

Q9HSM6              	100.00%		B3KZP9              	100.00%
Bootstrap support for Q9HSM6 as seed ortholog is 100%.
Bootstrap support for B3KZP9 as seed ortholog is 100%.

Group of orthologs #71. Best score 182 bits
Score difference with first non-orthologous sequence - H.salinarum:182 P.knowlesi:182

Q9HPA4              	100.00%		B3LAJ1              	100.00%
Bootstrap support for Q9HPA4 as seed ortholog is 100%.
Bootstrap support for B3LAJ1 as seed ortholog is 100%.

Group of orthologs #72. Best score 181 bits
Score difference with first non-orthologous sequence - H.salinarum:181 P.knowlesi:181

Q9HNF0              	100.00%		B3L0N2              	100.00%
Bootstrap support for Q9HNF0 as seed ortholog is 100%.
Bootstrap support for B3L0N2 as seed ortholog is 100%.

Group of orthologs #73. Best score 180 bits
Score difference with first non-orthologous sequence - H.salinarum:180 P.knowlesi:180

Q9HR43              	100.00%		B3L1I5              	100.00%
Bootstrap support for Q9HR43 as seed ortholog is 100%.
Bootstrap support for B3L1I5 as seed ortholog is 100%.

Group of orthologs #74. Best score 179 bits
Score difference with first non-orthologous sequence - H.salinarum:179 P.knowlesi:179

Q9HPD4              	100.00%		B3L240              	100.00%
Bootstrap support for Q9HPD4 as seed ortholog is 100%.
Bootstrap support for B3L240 as seed ortholog is 100%.

Group of orthologs #75. Best score 178 bits
Score difference with first non-orthologous sequence - H.salinarum:178 P.knowlesi:178

Q9HMM6              	100.00%		B3L056              	100.00%
Bootstrap support for Q9HMM6 as seed ortholog is 100%.
Bootstrap support for B3L056 as seed ortholog is 100%.

Group of orthologs #76. Best score 178 bits
Score difference with first non-orthologous sequence - H.salinarum:178 P.knowlesi:178

Q9HQC2              	100.00%		B3L7H9              	100.00%
Bootstrap support for Q9HQC2 as seed ortholog is 100%.
Bootstrap support for B3L7H9 as seed ortholog is 100%.

Group of orthologs #77. Best score 177 bits
Score difference with first non-orthologous sequence - H.salinarum:177 P.knowlesi:177

Q9HNI2              	100.00%		B3L2P3              	100.00%
Bootstrap support for Q9HNI2 as seed ortholog is 100%.
Bootstrap support for B3L2P3 as seed ortholog is 100%.

Group of orthologs #78. Best score 175 bits
Score difference with first non-orthologous sequence - H.salinarum:175 P.knowlesi:175

Q9HNL6              	100.00%		B3L268              	100.00%
Bootstrap support for Q9HNL6 as seed ortholog is 100%.
Bootstrap support for B3L268 as seed ortholog is 100%.

Group of orthologs #79. Best score 174 bits
Score difference with first non-orthologous sequence - H.salinarum:174 P.knowlesi:174

Q9HP07              	100.00%		B3L7I7              	100.00%
Bootstrap support for Q9HP07 as seed ortholog is 100%.
Bootstrap support for B3L7I7 as seed ortholog is 100%.

Group of orthologs #80. Best score 174 bits
Score difference with first non-orthologous sequence - H.salinarum:174 P.knowlesi:174

Q9HHN2              	100.00%		B3LCI0              	100.00%
Bootstrap support for Q9HHN2 as seed ortholog is 100%.
Bootstrap support for B3LCI0 as seed ortholog is 100%.

Group of orthologs #81. Best score 170 bits
Score difference with first non-orthologous sequence - H.salinarum:170 P.knowlesi:170

Q9HRV9              	100.00%		B3L1S9              	100.00%
Bootstrap support for Q9HRV9 as seed ortholog is 100%.
Bootstrap support for B3L1S9 as seed ortholog is 100%.

Group of orthologs #82. Best score 162 bits
Score difference with first non-orthologous sequence - H.salinarum:162 P.knowlesi:14

P57697              	100.00%		B3KZR0              	100.00%
Bootstrap support for P57697 as seed ortholog is 100%.
Bootstrap support for B3KZR0 as seed ortholog is 68%.
Alternative seed ortholog is B3L786 (14 bits away from this cluster)

Group of orthologs #83. Best score 160 bits
Score difference with first non-orthologous sequence - H.salinarum:160 P.knowlesi:160

Q9HMK3              	100.00%		B3L4J2              	100.00%
Bootstrap support for Q9HMK3 as seed ortholog is 100%.
Bootstrap support for B3L4J2 as seed ortholog is 100%.

Group of orthologs #84. Best score 157 bits
Score difference with first non-orthologous sequence - H.salinarum:157 P.knowlesi:157

Q9HPD3              	100.00%		B3L6J8              	100.00%
Bootstrap support for Q9HPD3 as seed ortholog is 100%.
Bootstrap support for B3L6J8 as seed ortholog is 100%.

Group of orthologs #85. Best score 153 bits
Score difference with first non-orthologous sequence - H.salinarum:153 P.knowlesi:153

Q9HSL2              	100.00%		B3L1H7              	100.00%
Bootstrap support for Q9HSL2 as seed ortholog is 100%.
Bootstrap support for B3L1H7 as seed ortholog is 100%.

Group of orthologs #86. Best score 152 bits
Score difference with first non-orthologous sequence - H.salinarum:152 P.knowlesi:152

P0CX00              	100.00%		B3L4C7              	100.00%
Bootstrap support for P0CX00 as seed ortholog is 100%.
Bootstrap support for B3L4C7 as seed ortholog is 100%.

Group of orthologs #87. Best score 152 bits
Score difference with first non-orthologous sequence - H.salinarum:152 P.knowlesi:152

P61136              	100.00%		B3L6V5              	100.00%
Bootstrap support for P61136 as seed ortholog is 100%.
Bootstrap support for B3L6V5 as seed ortholog is 100%.

Group of orthologs #88. Best score 151 bits
Score difference with first non-orthologous sequence - H.salinarum:151 P.knowlesi:151

Q9HMF1              	100.00%		B3L8H8              	100.00%
Bootstrap support for Q9HMF1 as seed ortholog is 100%.
Bootstrap support for B3L8H8 as seed ortholog is 100%.

Group of orthologs #89. Best score 148 bits
Score difference with first non-orthologous sequence - H.salinarum:148 P.knowlesi:148

Q9HSK7              	100.00%		B3L8Q7              	100.00%
Bootstrap support for Q9HSK7 as seed ortholog is 100%.
Bootstrap support for B3L8Q7 as seed ortholog is 100%.

Group of orthologs #90. Best score 148 bits
Score difference with first non-orthologous sequence - H.salinarum:148 P.knowlesi:148

Q9HQ65              	100.00%		B3LCC4              	100.00%
Bootstrap support for Q9HQ65 as seed ortholog is 100%.
Bootstrap support for B3LCC4 as seed ortholog is 100%.

Group of orthologs #91. Best score 146 bits
Score difference with first non-orthologous sequence - H.salinarum:146 P.knowlesi:146

P0CX01              	100.00%		B3L0A6              	100.00%
Bootstrap support for P0CX01 as seed ortholog is 100%.
Bootstrap support for B3L0A6 as seed ortholog is 100%.

Group of orthologs #92. Best score 146 bits
Score difference with first non-orthologous sequence - H.salinarum:146 P.knowlesi:72

Q9HN75              	100.00%		B3L4G3              	100.00%
Bootstrap support for Q9HN75 as seed ortholog is 100%.
Bootstrap support for B3L4G3 as seed ortholog is 91%.

Group of orthologs #93. Best score 146 bits
Score difference with first non-orthologous sequence - H.salinarum:146 P.knowlesi:146

Q9HMJ7              	100.00%		B3LA33              	100.00%
Bootstrap support for Q9HMJ7 as seed ortholog is 100%.
Bootstrap support for B3LA33 as seed ortholog is 100%.

Group of orthologs #94. Best score 144 bits
Score difference with first non-orthologous sequence - H.salinarum:144 P.knowlesi:144

Q9HPB4              	100.00%		B3L9U8              	100.00%
Bootstrap support for Q9HPB4 as seed ortholog is 100%.
Bootstrap support for B3L9U8 as seed ortholog is 100%.

Group of orthologs #95. Best score 144 bits
Score difference with first non-orthologous sequence - H.salinarum:144 P.knowlesi:144

Q9HS90              	100.00%		B3L8C2              	100.00%
Bootstrap support for Q9HS90 as seed ortholog is 100%.
Bootstrap support for B3L8C2 as seed ortholog is 100%.

Group of orthologs #96. Best score 143 bits
Score difference with first non-orthologous sequence - H.salinarum:143 P.knowlesi:143

Q9HMV8              	100.00%		B3L8Y6              	100.00%
                    	       		B3L8Y3              	27.41%
                    	       		B3L7M3              	23.22%
Bootstrap support for Q9HMV8 as seed ortholog is 100%.
Bootstrap support for B3L8Y6 as seed ortholog is 100%.

Group of orthologs #97. Best score 141 bits
Score difference with first non-orthologous sequence - H.salinarum:141 P.knowlesi:141

P57713              	100.00%		B3L230              	100.00%
Bootstrap support for P57713 as seed ortholog is 100%.
Bootstrap support for B3L230 as seed ortholog is 100%.

Group of orthologs #98. Best score 141 bits
Score difference with first non-orthologous sequence - H.salinarum:141 P.knowlesi:141

Q9HSA8              	100.00%		B3L430              	100.00%
Bootstrap support for Q9HSA8 as seed ortholog is 100%.
Bootstrap support for B3L430 as seed ortholog is 100%.

Group of orthologs #99. Best score 138 bits
Score difference with first non-orthologous sequence - H.salinarum:138 P.knowlesi:138

Q9HQD1              	100.00%		B3L2P2              	100.00%
Bootstrap support for Q9HQD1 as seed ortholog is 100%.
Bootstrap support for B3L2P2 as seed ortholog is 100%.

Group of orthologs #100. Best score 138 bits
Score difference with first non-orthologous sequence - H.salinarum:138 P.knowlesi:138

Q9HQJ5              	100.00%		B3L6A6              	100.00%
Bootstrap support for Q9HQJ5 as seed ortholog is 100%.
Bootstrap support for B3L6A6 as seed ortholog is 100%.

Group of orthologs #101. Best score 136 bits
Score difference with first non-orthologous sequence - H.salinarum:136 P.knowlesi:136

Q9HMG5              	100.00%		B3L9M2              	100.00%
Bootstrap support for Q9HMG5 as seed ortholog is 100%.
Bootstrap support for B3L9M2 as seed ortholog is 100%.

Group of orthologs #102. Best score 134 bits
Score difference with first non-orthologous sequence - H.salinarum:33 P.knowlesi:134

Q9HPQ4              	100.00%		B3L7W8              	100.00%
Bootstrap support for Q9HPQ4 as seed ortholog is 76%.
Bootstrap support for B3L7W8 as seed ortholog is 100%.

Group of orthologs #103. Best score 134 bits
Score difference with first non-orthologous sequence - H.salinarum:134 P.knowlesi:134

Q9HMU4              	100.00%		B3LAV4              	100.00%
Bootstrap support for Q9HMU4 as seed ortholog is 100%.
Bootstrap support for B3LAV4 as seed ortholog is 100%.

Group of orthologs #104. Best score 133 bits
Score difference with first non-orthologous sequence - H.salinarum:133 P.knowlesi:133

P57699              	100.00%		B3KZL1              	100.00%
                    	       		B3LBA7              	14.07%
Bootstrap support for P57699 as seed ortholog is 100%.
Bootstrap support for B3KZL1 as seed ortholog is 100%.

Group of orthologs #105. Best score 132 bits
Score difference with first non-orthologous sequence - H.salinarum:132 P.knowlesi:29

Q9HNW6              	100.00%		B3L5X6              	100.00%
                    	       		B3L4W6              	9.25%
Bootstrap support for Q9HNW6 as seed ortholog is 100%.
Bootstrap support for B3L5X6 as seed ortholog is 82%.

Group of orthologs #106. Best score 130 bits
Score difference with first non-orthologous sequence - H.salinarum:30 P.knowlesi:72

Q9HQ41              	100.00%		B3L2P6              	100.00%
Bootstrap support for Q9HQ41 as seed ortholog is 91%.
Bootstrap support for B3L2P6 as seed ortholog is 99%.

Group of orthologs #107. Best score 130 bits
Score difference with first non-orthologous sequence - H.salinarum:130 P.knowlesi:130

Q9HS79              	100.00%		B3L1G8              	100.00%
Bootstrap support for Q9HS79 as seed ortholog is 100%.
Bootstrap support for B3L1G8 as seed ortholog is 100%.

Group of orthologs #108. Best score 129 bits
Score difference with first non-orthologous sequence - H.salinarum:129 P.knowlesi:129

Q9HQ08              	100.00%		B3L315              	100.00%
Q9HMP9              	5.66%		
Bootstrap support for Q9HQ08 as seed ortholog is 100%.
Bootstrap support for B3L315 as seed ortholog is 100%.

Group of orthologs #109. Best score 129 bits
Score difference with first non-orthologous sequence - H.salinarum:129 P.knowlesi:129

Q9HN62              	100.00%		B3KZ67              	100.00%
Bootstrap support for Q9HN62 as seed ortholog is 100%.
Bootstrap support for B3KZ67 as seed ortholog is 100%.

Group of orthologs #110. Best score 126 bits
Score difference with first non-orthologous sequence - H.salinarum:126 P.knowlesi:126

Q9HSA4              	100.00%		B3L2B7              	100.00%
                    	       		B3L3I0              	8.27%
Bootstrap support for Q9HSA4 as seed ortholog is 100%.
Bootstrap support for B3L2B7 as seed ortholog is 100%.

Group of orthologs #111. Best score 126 bits
Score difference with first non-orthologous sequence - H.salinarum:126 P.knowlesi:126

Q9HQ27              	100.00%		B3L014              	100.00%
Bootstrap support for Q9HQ27 as seed ortholog is 100%.
Bootstrap support for B3L014 as seed ortholog is 100%.

Group of orthologs #112. Best score 125 bits
Score difference with first non-orthologous sequence - H.salinarum:125 P.knowlesi:125

Q9HMZ1              	100.00%		B3LA15              	100.00%
Bootstrap support for Q9HMZ1 as seed ortholog is 100%.
Bootstrap support for B3LA15 as seed ortholog is 100%.

Group of orthologs #113. Best score 125 bits
Score difference with first non-orthologous sequence - H.salinarum:125 P.knowlesi:125

P15010              	100.00%		B3LBZ3              	100.00%
Bootstrap support for P15010 as seed ortholog is 100%.
Bootstrap support for B3LBZ3 as seed ortholog is 100%.

Group of orthologs #114. Best score 124 bits
Score difference with first non-orthologous sequence - H.salinarum:124 P.knowlesi:124

P09737              	100.00%		B3LC58              	100.00%
P09224              	76.87%		B3L7H4              	29.08%
Bootstrap support for P09737 as seed ortholog is 100%.
Bootstrap support for B3LC58 as seed ortholog is 100%.

Group of orthologs #115. Best score 124 bits
Score difference with first non-orthologous sequence - H.salinarum:124 P.knowlesi:124

Q9HN24              	100.00%		B3L6U2              	100.00%
Bootstrap support for Q9HN24 as seed ortholog is 100%.
Bootstrap support for B3L6U2 as seed ortholog is 100%.

Group of orthologs #116. Best score 124 bits
Score difference with first non-orthologous sequence - H.salinarum:124 P.knowlesi:2

Q9HSQ7              	100.00%		B3L8J6              	100.00%
Bootstrap support for Q9HSQ7 as seed ortholog is 100%.
Bootstrap support for B3L8J6 as seed ortholog is 51%.
Alternative seed ortholog is B3L5R0 (2 bits away from this cluster)

Group of orthologs #117. Best score 121 bits
Score difference with first non-orthologous sequence - H.salinarum:121 P.knowlesi:121

Q9HQJ2              	100.00%		B3LC68              	100.00%
Bootstrap support for Q9HQJ2 as seed ortholog is 100%.
Bootstrap support for B3LC68 as seed ortholog is 100%.

Group of orthologs #118. Best score 120 bits
Score difference with first non-orthologous sequence - H.salinarum:120 P.knowlesi:22

Q9HPA7              	100.00%		B3L3M8              	100.00%
Bootstrap support for Q9HPA7 as seed ortholog is 100%.
Bootstrap support for B3L3M8 as seed ortholog is 75%.

Group of orthologs #119. Best score 119 bits
Score difference with first non-orthologous sequence - H.salinarum:119 P.knowlesi:119

Q9HMF2              	100.00%		B3L6J4              	100.00%
                    	       		B3L6J7              	7.33%
Bootstrap support for Q9HMF2 as seed ortholog is 100%.
Bootstrap support for B3L6J4 as seed ortholog is 100%.

Group of orthologs #120. Best score 117 bits
Score difference with first non-orthologous sequence - H.salinarum:117 P.knowlesi:117

Q9HR25              	100.00%		B3L6D2              	100.00%
Q9HP14              	10.72%		
Bootstrap support for Q9HR25 as seed ortholog is 100%.
Bootstrap support for B3L6D2 as seed ortholog is 100%.

Group of orthologs #121. Best score 117 bits
Score difference with first non-orthologous sequence - H.salinarum:117 P.knowlesi:117

P15009              	100.00%		B3L9A1              	100.00%
Bootstrap support for P15009 as seed ortholog is 100%.
Bootstrap support for B3L9A1 as seed ortholog is 100%.

Group of orthologs #122. Best score 116 bits
Score difference with first non-orthologous sequence - H.salinarum:116 P.knowlesi:116

P50558              	100.00%		B3L086              	100.00%
Bootstrap support for P50558 as seed ortholog is 100%.
Bootstrap support for B3L086 as seed ortholog is 100%.

Group of orthologs #123. Best score 116 bits
Score difference with first non-orthologous sequence - H.salinarum:116 P.knowlesi:116

Q9HQK6              	100.00%		B3L3M9              	100.00%
Bootstrap support for Q9HQK6 as seed ortholog is 100%.
Bootstrap support for B3L3M9 as seed ortholog is 100%.

Group of orthologs #124. Best score 114 bits
Score difference with first non-orthologous sequence - H.salinarum:114 P.knowlesi:114

Q9HQH1              	100.00%		B3LAK2              	100.00%
Bootstrap support for Q9HQH1 as seed ortholog is 100%.
Bootstrap support for B3LAK2 as seed ortholog is 100%.

Group of orthologs #125. Best score 113 bits
Score difference with first non-orthologous sequence - H.salinarum:113 P.knowlesi:52

O24787              	100.00%		B3L8R4              	100.00%
Bootstrap support for O24787 as seed ortholog is 100%.
Bootstrap support for B3L8R4 as seed ortholog is 99%.

Group of orthologs #126. Best score 111 bits
Score difference with first non-orthologous sequence - H.salinarum:111 P.knowlesi:111

O54523              	100.00%		B3L8I7              	100.00%
Q9HN03              	47.63%		
Q9HHS6              	32.12%		
Bootstrap support for O54523 as seed ortholog is 100%.
Bootstrap support for B3L8I7 as seed ortholog is 100%.

Group of orthologs #127. Best score 111 bits
Score difference with first non-orthologous sequence - H.salinarum:111 P.knowlesi:111

P13553              	100.00%		B3L5A9              	100.00%
Bootstrap support for P13553 as seed ortholog is 100%.
Bootstrap support for B3L5A9 as seed ortholog is 100%.

Group of orthologs #128. Best score 109 bits
Score difference with first non-orthologous sequence - H.salinarum:109 P.knowlesi:109

Q9HPR5              	100.00%		B3L0B0              	100.00%
Bootstrap support for Q9HPR5 as seed ortholog is 100%.
Bootstrap support for B3L0B0 as seed ortholog is 100%.

Group of orthologs #129. Best score 109 bits
Score difference with first non-orthologous sequence - H.salinarum:109 P.knowlesi:109

Q9HQG3              	100.00%		B3LAT9              	100.00%
Bootstrap support for Q9HQG3 as seed ortholog is 100%.
Bootstrap support for B3LAT9 as seed ortholog is 100%.

Group of orthologs #130. Best score 108 bits
Score difference with first non-orthologous sequence - H.salinarum:49 P.knowlesi:108

Q9HSZ9              	100.00%		B3LAG9              	100.00%
Q9HSZ8              	14.37%		
Bootstrap support for Q9HSZ9 as seed ortholog is 85%.
Bootstrap support for B3LAG9 as seed ortholog is 100%.

Group of orthologs #131. Best score 108 bits
Score difference with first non-orthologous sequence - H.salinarum:108 P.knowlesi:108

Q9HND8              	100.00%		B3KZ79              	100.00%
Bootstrap support for Q9HND8 as seed ortholog is 100%.
Bootstrap support for B3KZ79 as seed ortholog is 100%.

Group of orthologs #132. Best score 108 bits
Score difference with first non-orthologous sequence - H.salinarum:108 P.knowlesi:108

Q9HNS4              	100.00%		B3L4D2              	100.00%
Bootstrap support for Q9HNS4 as seed ortholog is 100%.
Bootstrap support for B3L4D2 as seed ortholog is 100%.

Group of orthologs #133. Best score 107 bits
Score difference with first non-orthologous sequence - H.salinarum:107 P.knowlesi:107

Q9HSS4              	100.00%		B3LAL7              	100.00%
Bootstrap support for Q9HSS4 as seed ortholog is 100%.
Bootstrap support for B3LAL7 as seed ortholog is 100%.

Group of orthologs #134. Best score 106 bits
Score difference with first non-orthologous sequence - H.salinarum:106 P.knowlesi:106

Q9HN88              	100.00%		B3L8Y4              	100.00%
                    	       		B3L8V5              	11.70%
Bootstrap support for Q9HN88 as seed ortholog is 100%.
Bootstrap support for B3L8Y4 as seed ortholog is 100%.

Group of orthologs #135. Best score 104 bits
Score difference with first non-orthologous sequence - H.salinarum:104 P.knowlesi:104

Q9HRZ2              	100.00%		B3L7E6              	100.00%
Bootstrap support for Q9HRZ2 as seed ortholog is 100%.
Bootstrap support for B3L7E6 as seed ortholog is 100%.

Group of orthologs #136. Best score 103 bits
Score difference with first non-orthologous sequence - H.salinarum:103 P.knowlesi:103

Q9HNL8              	100.00%		B3L098              	100.00%
Bootstrap support for Q9HNL8 as seed ortholog is 100%.
Bootstrap support for B3L098 as seed ortholog is 100%.

Group of orthologs #137. Best score 103 bits
Score difference with first non-orthologous sequence - H.salinarum:103 P.knowlesi:103

Q9V2W4              	100.00%		B3L567              	100.00%
Bootstrap support for Q9V2W4 as seed ortholog is 100%.
Bootstrap support for B3L567 as seed ortholog is 100%.

Group of orthologs #138. Best score 102 bits
Score difference with first non-orthologous sequence - H.salinarum:102 P.knowlesi:25

Q9HP03              	100.00%		B3LBE8              	100.00%
Bootstrap support for Q9HP03 as seed ortholog is 100%.
Bootstrap support for B3LBE8 as seed ortholog is 74%.
Alternative seed ortholog is B3LAB0 (25 bits away from this cluster)

Group of orthologs #139. Best score 102 bits
Score difference with first non-orthologous sequence - H.salinarum:102 P.knowlesi:102

Q9HS60              	100.00%		B3LCL3              	100.00%
Bootstrap support for Q9HS60 as seed ortholog is 100%.
Bootstrap support for B3LCL3 as seed ortholog is 100%.

Group of orthologs #140. Best score 101 bits
Score difference with first non-orthologous sequence - H.salinarum:101 P.knowlesi:101

Q9HRA2              	100.00%		B3L734              	100.00%
Bootstrap support for Q9HRA2 as seed ortholog is 100%.
Bootstrap support for B3L734 as seed ortholog is 100%.

Group of orthologs #141. Best score 100 bits
Score difference with first non-orthologous sequence - H.salinarum:100 P.knowlesi:100

Q9HQJ6              	100.00%		B3L665              	100.00%
Bootstrap support for Q9HQJ6 as seed ortholog is 100%.
Bootstrap support for B3L665 as seed ortholog is 100%.

Group of orthologs #142. Best score 99 bits
Score difference with first non-orthologous sequence - H.salinarum:99 P.knowlesi:99

Q9HSK1              	100.00%		B3L7S7              	100.00%
Bootstrap support for Q9HSK1 as seed ortholog is 100%.
Bootstrap support for B3L7S7 as seed ortholog is 100%.

Group of orthologs #143. Best score 98 bits
Score difference with first non-orthologous sequence - H.salinarum:98 P.knowlesi:5

Q9HN40              	100.00%		B3L398              	100.00%
Bootstrap support for Q9HN40 as seed ortholog is 100%.
Bootstrap support for B3L398 as seed ortholog is 50%.
Alternative seed ortholog is B3LBQ8 (5 bits away from this cluster)

Group of orthologs #144. Best score 98 bits
Score difference with first non-orthologous sequence - H.salinarum:98 P.knowlesi:98

Q9P9M3              	100.00%		B3L1Z3              	100.00%
Bootstrap support for Q9P9M3 as seed ortholog is 100%.
Bootstrap support for B3L1Z3 as seed ortholog is 100%.

Group of orthologs #145. Best score 98 bits
Score difference with first non-orthologous sequence - H.salinarum:98 P.knowlesi:98

Q9HNK4              	100.00%		B3L9Q8              	100.00%
Bootstrap support for Q9HNK4 as seed ortholog is 100%.
Bootstrap support for B3L9Q8 as seed ortholog is 100%.

Group of orthologs #146. Best score 97 bits
Score difference with first non-orthologous sequence - H.salinarum:97 P.knowlesi:97

Q9HPB9              	100.00%		B3L443              	100.00%
Bootstrap support for Q9HPB9 as seed ortholog is 100%.
Bootstrap support for B3L443 as seed ortholog is 100%.

Group of orthologs #147. Best score 96 bits
Score difference with first non-orthologous sequence - H.salinarum:96 P.knowlesi:96

O24786              	100.00%		B3L435              	100.00%
Bootstrap support for O24786 as seed ortholog is 100%.
Bootstrap support for B3L435 as seed ortholog is 100%.

Group of orthologs #148. Best score 96 bits
Score difference with first non-orthologous sequence - H.salinarum:96 P.knowlesi:96

Q9HN33              	100.00%		B3L6C0              	100.00%
Bootstrap support for Q9HN33 as seed ortholog is 100%.
Bootstrap support for B3L6C0 as seed ortholog is 100%.

Group of orthologs #149. Best score 94 bits
Score difference with first non-orthologous sequence - H.salinarum:94 P.knowlesi:94

P61414              	100.00%		B3L001              	100.00%
Bootstrap support for P61414 as seed ortholog is 100%.
Bootstrap support for B3L001 as seed ortholog is 100%.

Group of orthologs #150. Best score 93 bits
Score difference with first non-orthologous sequence - H.salinarum:93 P.knowlesi:32

Q9HR36              	100.00%		B3L3Q4              	100.00%
Bootstrap support for Q9HR36 as seed ortholog is 100%.
Bootstrap support for B3L3Q4 as seed ortholog is 90%.

Group of orthologs #151. Best score 92 bits
Score difference with first non-orthologous sequence - H.salinarum:92 P.knowlesi:92

Q9HSP7              	100.00%		B3L2S3              	100.00%
Bootstrap support for Q9HSP7 as seed ortholog is 100%.
Bootstrap support for B3L2S3 as seed ortholog is 100%.

Group of orthologs #152. Best score 92 bits
Score difference with first non-orthologous sequence - H.salinarum:92 P.knowlesi:92

Q9HMY5              	100.00%		B3LB83              	100.00%
Bootstrap support for Q9HMY5 as seed ortholog is 100%.
Bootstrap support for B3LB83 as seed ortholog is 100%.

Group of orthologs #153. Best score 91 bits
Score difference with first non-orthologous sequence - H.salinarum:91 P.knowlesi:91

Q9HR56              	100.00%		B3LAM7              	100.00%
Bootstrap support for Q9HR56 as seed ortholog is 100%.
Bootstrap support for B3LAM7 as seed ortholog is 100%.

Group of orthologs #154. Best score 90 bits
Score difference with first non-orthologous sequence - H.salinarum:90 P.knowlesi:90

Q9HPC2              	100.00%		B3L4K6              	100.00%
Bootstrap support for Q9HPC2 as seed ortholog is 100%.
Bootstrap support for B3L4K6 as seed ortholog is 100%.

Group of orthologs #155. Best score 90 bits
Score difference with first non-orthologous sequence - H.salinarum:90 P.knowlesi:90

Q9HNR4              	100.00%		B3LAY7              	100.00%
Bootstrap support for Q9HNR4 as seed ortholog is 100%.
Bootstrap support for B3LAY7 as seed ortholog is 100%.

Group of orthologs #156. Best score 89 bits
Score difference with first non-orthologous sequence - H.salinarum:89 P.knowlesi:89

Q9HN56              	100.00%		B3L6K8              	100.00%
Q9HHE9              	60.51%		
Q48325              	60.14%		
O52018              	53.99%		
O52004              	17.75%		
Bootstrap support for Q9HN56 as seed ortholog is 100%.
Bootstrap support for B3L6K8 as seed ortholog is 100%.

Group of orthologs #157. Best score 89 bits
Score difference with first non-orthologous sequence - H.salinarum:89 P.knowlesi:89

O52003              	100.00%		B3L1B2              	100.00%
                    	       		B3L193              	10.29%
                    	       		B3KZB3              	5.39%
Bootstrap support for O52003 as seed ortholog is 100%.
Bootstrap support for B3L1B2 as seed ortholog is 100%.

Group of orthologs #158. Best score 89 bits
Score difference with first non-orthologous sequence - H.salinarum:89 P.knowlesi:89

Q9HPJ7              	100.00%		B3L6W6              	100.00%
                    	       		B3L8F9              	8.45%
Bootstrap support for Q9HPJ7 as seed ortholog is 100%.
Bootstrap support for B3L6W6 as seed ortholog is 100%.

Group of orthologs #159. Best score 89 bits
Score difference with first non-orthologous sequence - H.salinarum:89 P.knowlesi:89

P50562              	100.00%		B3LAE0              	100.00%
Bootstrap support for P50562 as seed ortholog is 100%.
Bootstrap support for B3LAE0 as seed ortholog is 100%.

Group of orthologs #160. Best score 87 bits
Score difference with first non-orthologous sequence - H.salinarum:87 P.knowlesi:87

Q9HSU9              	100.00%		B3LC69              	100.00%
Q9HSV1              	29.40%		
Bootstrap support for Q9HSU9 as seed ortholog is 100%.
Bootstrap support for B3LC69 as seed ortholog is 100%.

Group of orthologs #161. Best score 87 bits
Score difference with first non-orthologous sequence - H.salinarum:87 P.knowlesi:87

Q9HP48              	100.00%		B3L094              	100.00%
Bootstrap support for Q9HP48 as seed ortholog is 100%.
Bootstrap support for B3L094 as seed ortholog is 100%.

Group of orthologs #162. Best score 84 bits
Score difference with first non-orthologous sequence - H.salinarum:84 P.knowlesi:84

P48854              	100.00%		B3L3G6              	100.00%
Bootstrap support for P48854 as seed ortholog is 100%.
Bootstrap support for B3L3G6 as seed ortholog is 100%.

Group of orthologs #163. Best score 84 bits
Score difference with first non-orthologous sequence - H.salinarum:84 P.knowlesi:84

Q9HPB6              	100.00%		B3L7Q9              	100.00%
Bootstrap support for Q9HPB6 as seed ortholog is 100%.
Bootstrap support for B3L7Q9 as seed ortholog is 100%.

Group of orthologs #164. Best score 81 bits
Score difference with first non-orthologous sequence - H.salinarum:81 P.knowlesi:81

Q9HP68              	100.00%		B3L125              	100.00%
Bootstrap support for Q9HP68 as seed ortholog is 100%.
Bootstrap support for B3L125 as seed ortholog is 100%.

Group of orthologs #165. Best score 81 bits
Score difference with first non-orthologous sequence - H.salinarum:81 P.knowlesi:81

Q9HNE7              	100.00%		B3L8I0              	100.00%
Bootstrap support for Q9HNE7 as seed ortholog is 100%.
Bootstrap support for B3L8I0 as seed ortholog is 100%.

Group of orthologs #166. Best score 80 bits
Score difference with first non-orthologous sequence - H.salinarum:80 P.knowlesi:80

Q9HN30              	100.00%		B3L3R5              	100.00%
Q9HR19              	10.53%		
Q9HN85              	7.42%		
Bootstrap support for Q9HN30 as seed ortholog is 100%.
Bootstrap support for B3L3R5 as seed ortholog is 100%.

Group of orthologs #167. Best score 80 bits
Score difference with first non-orthologous sequence - H.salinarum:80 P.knowlesi:80

Q9HN64              	100.00%		B3L5N9              	100.00%
Q9HP87              	44.72%		
Bootstrap support for Q9HN64 as seed ortholog is 100%.
Bootstrap support for B3L5N9 as seed ortholog is 100%.

Group of orthologs #168. Best score 79 bits
Score difference with first non-orthologous sequence - H.salinarum:79 P.knowlesi:79

Q9HMD2              	100.00%		B3L4W5              	100.00%
Bootstrap support for Q9HMD2 as seed ortholog is 100%.
Bootstrap support for B3L4W5 as seed ortholog is 100%.

Group of orthologs #169. Best score 77 bits
Score difference with first non-orthologous sequence - H.salinarum:77 P.knowlesi:77

Q9HRF8              	100.00%		B3LC44              	100.00%
Q9HR34              	15.27%		
Bootstrap support for Q9HRF8 as seed ortholog is 100%.
Bootstrap support for B3LC44 as seed ortholog is 100%.

Group of orthologs #170. Best score 77 bits
Score difference with first non-orthologous sequence - H.salinarum:77 P.knowlesi:77

Q9HRX7              	100.00%		B3LCU7              	100.00%
Bootstrap support for Q9HRX7 as seed ortholog is 100%.
Bootstrap support for B3LCU7 as seed ortholog is 100%.

Group of orthologs #171. Best score 76 bits
Score difference with first non-orthologous sequence - H.salinarum:76 P.knowlesi:76

Q9HQ97              	100.00%		B3L3P6              	100.00%
Bootstrap support for Q9HQ97 as seed ortholog is 100%.
Bootstrap support for B3L3P6 as seed ortholog is 100%.

Group of orthologs #172. Best score 76 bits
Score difference with first non-orthologous sequence - H.salinarum:76 P.knowlesi:76

P15008              	100.00%		B3L879              	100.00%
Bootstrap support for P15008 as seed ortholog is 100%.
Bootstrap support for B3L879 as seed ortholog is 100%.

Group of orthologs #173. Best score 76 bits
Score difference with first non-orthologous sequence - H.salinarum:76 P.knowlesi:76

Q9HPB8              	100.00%		B3L904              	100.00%
Bootstrap support for Q9HPB8 as seed ortholog is 100%.
Bootstrap support for B3L904 as seed ortholog is 100%.

Group of orthologs #174. Best score 75 bits
Score difference with first non-orthologous sequence - H.salinarum:75 P.knowlesi:75

P13575              	100.00%		B3LA05              	100.00%
Bootstrap support for P13575 as seed ortholog is 100%.
Bootstrap support for B3LA05 as seed ortholog is 100%.

Group of orthologs #175. Best score 74 bits
Score difference with first non-orthologous sequence - H.salinarum:74 P.knowlesi:74

Q9HNP2              	100.00%		B3L1P2              	100.00%
Bootstrap support for Q9HNP2 as seed ortholog is 100%.
Bootstrap support for B3L1P2 as seed ortholog is 100%.

Group of orthologs #176. Best score 74 bits
Score difference with first non-orthologous sequence - H.salinarum:74 P.knowlesi:74

Q9HRT8              	100.00%		B3KZR6              	100.00%
Bootstrap support for Q9HRT8 as seed ortholog is 100%.
Bootstrap support for B3KZR6 as seed ortholog is 100%.

Group of orthologs #177. Best score 73 bits
Score difference with first non-orthologous sequence - H.salinarum:73 P.knowlesi:73

Q9HRX2              	100.00%		B3L0B3              	100.00%
Q9HP92              	34.54%		
Bootstrap support for Q9HRX2 as seed ortholog is 100%.
Bootstrap support for B3L0B3 as seed ortholog is 100%.

Group of orthologs #178. Best score 73 bits
Score difference with first non-orthologous sequence - H.salinarum:73 P.knowlesi:14

O46709              	100.00%		B3L9J3              	100.00%
Bootstrap support for O46709 as seed ortholog is 100%.
Bootstrap support for B3L9J3 as seed ortholog is 80%.

Group of orthologs #179. Best score 72 bits
Score difference with first non-orthologous sequence - H.salinarum:72 P.knowlesi:72

Q9HS34              	100.00%		B3L0T6              	100.00%
Bootstrap support for Q9HS34 as seed ortholog is 100%.
Bootstrap support for B3L0T6 as seed ortholog is 100%.

Group of orthologs #180. Best score 71 bits
Score difference with first non-orthologous sequence - H.salinarum:71 P.knowlesi:71

Q9HS15              	100.00%		B3L4F5              	100.00%
                    	       		B3L7Y8              	11.23%
Bootstrap support for Q9HS15 as seed ortholog is 100%.
Bootstrap support for B3L4F5 as seed ortholog is 100%.

Group of orthologs #181. Best score 70 bits
Score difference with first non-orthologous sequence - H.salinarum:70 P.knowlesi:70

Q9HQJ4              	100.00%		B3L2P7              	100.00%
Bootstrap support for Q9HQJ4 as seed ortholog is 100%.
Bootstrap support for B3L2P7 as seed ortholog is 100%.

Group of orthologs #182. Best score 70 bits
Score difference with first non-orthologous sequence - H.salinarum:70 P.knowlesi:70

Q9HRA5              	100.00%		B3L3W7              	100.00%
Bootstrap support for Q9HRA5 as seed ortholog is 100%.
Bootstrap support for B3L3W7 as seed ortholog is 100%.

Group of orthologs #183. Best score 68 bits
Score difference with first non-orthologous sequence - H.salinarum:68 P.knowlesi:68

O51976              	100.00%		B3LB09              	100.00%
Q9HRI0              	18.52%		
Bootstrap support for O51976 as seed ortholog is 100%.
Bootstrap support for B3LB09 as seed ortholog is 100%.

Group of orthologs #184. Best score 67 bits
Score difference with first non-orthologous sequence - H.salinarum:67 P.knowlesi:16

P05969              	100.00%		B3L698              	100.00%
Bootstrap support for P05969 as seed ortholog is 100%.
Bootstrap support for B3L698 as seed ortholog is 77%.

Group of orthologs #185. Best score 65 bits
Score difference with first non-orthologous sequence - H.salinarum:65 P.knowlesi:65

Q9HR32              	100.00%		B3L238              	100.00%
Bootstrap support for Q9HR32 as seed ortholog is 100%.
Bootstrap support for B3L238 as seed ortholog is 100%.

Group of orthologs #186. Best score 65 bits
Score difference with first non-orthologous sequence - H.salinarum:65 P.knowlesi:65

Q9HQJ3              	100.00%		B3L3H1              	100.00%
Bootstrap support for Q9HQJ3 as seed ortholog is 100%.
Bootstrap support for B3L3H1 as seed ortholog is 100%.

Group of orthologs #187. Best score 64 bits
Score difference with first non-orthologous sequence - H.salinarum:64 P.knowlesi:64

Q9HPJ8              	100.00%		B3L5D7              	100.00%
Bootstrap support for Q9HPJ8 as seed ortholog is 100%.
Bootstrap support for B3L5D7 as seed ortholog is 100%.

Group of orthologs #188. Best score 63 bits
Score difference with first non-orthologous sequence - H.salinarum:63 P.knowlesi:63

Q9HQJ1              	100.00%		B3KZ26              	100.00%
Bootstrap support for Q9HQJ1 as seed ortholog is 100%.
Bootstrap support for B3KZ26 as seed ortholog is 100%.

Group of orthologs #189. Best score 62 bits
Score difference with first non-orthologous sequence - H.salinarum:62 P.knowlesi:62

Q9HN80              	100.00%		B3L3Z3              	100.00%
Q9HMV6              	14.63%		B3L971              	26.60%
                    	       		B3L1P5              	23.65%
                    	       		B3L0Q5              	22.17%
                    	       		B3L9H5              	16.50%
                    	       		B3L0G9              	15.76%
                    	       		B3L9V8              	15.52%
                    	       		B3L5Y4              	14.66%
                    	       		B3L6M6              	13.30%
                    	       		B3L794              	11.82%
                    	       		B3LDG0              	11.58%
                    	       		B3KZ76              	11.33%
                    	       		B3L8Q6              	10.71%
                    	       		B3LD60              	9.36%
                    	       		B3L3Y5              	8.13%
                    	       		B3L0A3              	7.76%
                    	       		B3L646              	6.03%
                    	       		B3LBN5              	5.54%
                    	       		B3LAI9              	5.17%
Bootstrap support for Q9HN80 as seed ortholog is 100%.
Bootstrap support for B3L3Z3 as seed ortholog is 100%.

Group of orthologs #190. Best score 62 bits
Score difference with first non-orthologous sequence - H.salinarum:62 P.knowlesi:62

Q9HS18              	100.00%		B3L297              	100.00%
                    	       		B3LCQ3              	10.57%
Bootstrap support for Q9HS18 as seed ortholog is 100%.
Bootstrap support for B3L297 as seed ortholog is 100%.

Group of orthologs #191. Best score 62 bits
Score difference with first non-orthologous sequence - H.salinarum:62 P.knowlesi:62

Q9HNR3              	100.00%		B3L7H0              	100.00%
Bootstrap support for Q9HNR3 as seed ortholog is 100%.
Bootstrap support for B3L7H0 as seed ortholog is 100%.

Group of orthologs #192. Best score 61 bits
Score difference with first non-orthologous sequence - H.salinarum:61 P.knowlesi:61

Q9HPH7              	100.00%		B3LBF4              	100.00%
Q9HMZ4              	26.14%		
Q9HRZ9              	13.19%		
Q9HRJ6              	11.99%		
Q9HNY3              	11.51%		
Q9HR06              	11.27%		
Q9HMG6              	11.27%		
Q9HRH8              	10.31%		
Q9HMG1              	9.83%		
Q9HHQ5              	9.83%		
Q9HNI8              	9.83%		
Q9HMX3              	9.11%		
Q9HMT3              	8.39%		
Q9HQ18              	7.91%		
Q9HML8              	7.91%		
Q9HHR7              	7.67%		
Q9HT03              	7.19%		
Q9HNZ9              	6.95%		
Q9HMU8              	6.71%		
Q9HS13              	6.24%		
Q9HMX2              	5.76%		
Q9HQA8              	5.52%		
Bootstrap support for Q9HPH7 as seed ortholog is 100%.
Bootstrap support for B3LBF4 as seed ortholog is 100%.

Group of orthologs #193. Best score 61 bits
Score difference with first non-orthologous sequence - H.salinarum:61 P.knowlesi:61

Q9HSG8              	100.00%		B3L0Q3              	100.00%
Bootstrap support for Q9HSG8 as seed ortholog is 100%.
Bootstrap support for B3L0Q3 as seed ortholog is 100%.

Group of orthologs #194. Best score 60 bits
Score difference with first non-orthologous sequence - H.salinarum:60 P.knowlesi:60

Q9HPS3              	100.00%		B3KZ11              	100.00%
Bootstrap support for Q9HPS3 as seed ortholog is 100%.
Bootstrap support for B3KZ11 as seed ortholog is 100%.

Group of orthologs #195. Best score 59 bits
Score difference with first non-orthologous sequence - H.salinarum:59 P.knowlesi:59

Q9HN45              	100.00%		B3L702              	100.00%
                    	       		B3LCQ6              	16.95%
Bootstrap support for Q9HN45 as seed ortholog is 100%.
Bootstrap support for B3L702 as seed ortholog is 100%.

Group of orthologs #196. Best score 57 bits
Score difference with first non-orthologous sequence - H.salinarum:57 P.knowlesi:57

Q9HHV6              	100.00%		B3L3U0              	100.00%
                    	       		B3L0Z7              	40.41%
Bootstrap support for Q9HHV6 as seed ortholog is 100%.
Bootstrap support for B3L3U0 as seed ortholog is 100%.

Group of orthologs #197. Best score 57 bits
Score difference with first non-orthologous sequence - H.salinarum:57 P.knowlesi:57

Q9HQH8              	100.00%		B3L543              	100.00%
Bootstrap support for Q9HQH8 as seed ortholog is 100%.
Bootstrap support for B3L543 as seed ortholog is 100%.

Group of orthologs #198. Best score 57 bits
Score difference with first non-orthologous sequence - H.salinarum:57 P.knowlesi:57

Q9HRY0              	100.00%		B3L551              	100.00%
Bootstrap support for Q9HRY0 as seed ortholog is 100%.
Bootstrap support for B3L551 as seed ortholog is 100%.

Group of orthologs #199. Best score 56 bits
Score difference with first non-orthologous sequence - H.salinarum:56 P.knowlesi:56

Q9HSB3              	100.00%		B3KZH0              	100.00%
Q9HRE6              	73.26%		
Q9HR45              	70.49%		
Q9HSF7              	59.38%		
Q9HHK5              	58.68%		
Q9HHH8              	29.34%		
Q9HNA2              	25.69%		
Bootstrap support for Q9HSB3 as seed ortholog is 100%.
Bootstrap support for B3KZH0 as seed ortholog is 100%.

Group of orthologs #200. Best score 56 bits
Score difference with first non-orthologous sequence - H.salinarum:56 P.knowlesi:56

Q9HP08              	100.00%		B3L1X5              	100.00%
Bootstrap support for Q9HP08 as seed ortholog is 100%.
Bootstrap support for B3L1X5 as seed ortholog is 100%.

Group of orthologs #201. Best score 56 bits
Score difference with first non-orthologous sequence - H.salinarum:56 P.knowlesi:56

Q9HP78              	100.00%		B3LB29              	100.00%
Bootstrap support for Q9HP78 as seed ortholog is 100%.
Bootstrap support for B3LB29 as seed ortholog is 100%.

Group of orthologs #202. Best score 54 bits
Score difference with first non-orthologous sequence - H.salinarum:54 P.knowlesi:54

Q9HPC3              	100.00%		B3L470              	100.00%
Bootstrap support for Q9HPC3 as seed ortholog is 100%.
Bootstrap support for B3L470 as seed ortholog is 100%.

Group of orthologs #203. Best score 53 bits
Score difference with first non-orthologous sequence - H.salinarum:53 P.knowlesi:53

Q9HQ21              	100.00%		B3LCF8              	100.00%
Bootstrap support for Q9HQ21 as seed ortholog is 100%.
Bootstrap support for B3LCF8 as seed ortholog is 100%.

Group of orthologs #204. Best score 52 bits
Score difference with first non-orthologous sequence - H.salinarum:52 P.knowlesi:52

Q9HMM5              	100.00%		B3L9M4              	100.00%
Bootstrap support for Q9HMM5 as seed ortholog is 100%.
Bootstrap support for B3L9M4 as seed ortholog is 100%.

Group of orthologs #205. Best score 50 bits
Score difference with first non-orthologous sequence - H.salinarum:50 P.knowlesi:50

Q9HS29              	100.00%		B3L657              	100.00%
Bootstrap support for Q9HS29 as seed ortholog is 100%.
Bootstrap support for B3L657 as seed ortholog is 100%.

Group of orthologs #206. Best score 50 bits
Score difference with first non-orthologous sequence - H.salinarum:7 P.knowlesi:3

Q9HHW1              	100.00%		B3LBK6              	100.00%
Bootstrap support for Q9HHW1 as seed ortholog is 61%.
Alternative seed ortholog is Q9HP50 (7 bits away from this cluster)
Bootstrap support for B3LBK6 as seed ortholog is 43%.
Alternative seed ortholog is B3L1E1 (3 bits away from this cluster)

Group of orthologs #207. Best score 49 bits
Score difference with first non-orthologous sequence - H.salinarum:49 P.knowlesi:49

Q9HSV2              	100.00%		B3L287              	100.00%
Q9HRP9              	12.92%		
Bootstrap support for Q9HSV2 as seed ortholog is 100%.
Bootstrap support for B3L287 as seed ortholog is 100%.

Group of orthologs #208. Best score 49 bits
Score difference with first non-orthologous sequence - H.salinarum:49 P.knowlesi:49

P57710              	100.00%		B3L9F1              	100.00%
Bootstrap support for P57710 as seed ortholog is 100%.
Bootstrap support for B3L9F1 as seed ortholog is 100%.

Group of orthologs #209. Best score 48 bits
Score difference with first non-orthologous sequence - H.salinarum:48 P.knowlesi:48

Q06847              	100.00%		B3LBG9              	100.00%
Bootstrap support for Q06847 as seed ortholog is 100%.
Bootstrap support for B3LBG9 as seed ortholog is 100%.

Group of orthologs #210. Best score 47 bits
Score difference with first non-orthologous sequence - H.salinarum:47 P.knowlesi:47

Q9HN69              	100.00%		B3L963              	100.00%
Bootstrap support for Q9HN69 as seed ortholog is 100%.
Bootstrap support for B3L963 as seed ortholog is 100%.

Group of orthologs #211. Best score 46 bits
Score difference with first non-orthologous sequence - H.salinarum:46 P.knowlesi:46

Q9HP28              	100.00%		B3LA28              	100.00%
                    	       		B3KZC5              	8.60%
Bootstrap support for Q9HP28 as seed ortholog is 100%.
Bootstrap support for B3LA28 as seed ortholog is 100%.

Group of orthologs #212. Best score 46 bits
Score difference with first non-orthologous sequence - H.salinarum:46 P.knowlesi:46

Q9HNA0              	100.00%		B3L1D1              	100.00%
Bootstrap support for Q9HNA0 as seed ortholog is 100%.
Bootstrap support for B3L1D1 as seed ortholog is 100%.

Group of orthologs #213. Best score 46 bits
Score difference with first non-orthologous sequence - H.salinarum:46 P.knowlesi:3

Q9HNL1              	100.00%		B3L4J9              	100.00%
Bootstrap support for Q9HNL1 as seed ortholog is 100%.
Bootstrap support for B3L4J9 as seed ortholog is 48%.
Alternative seed ortholog is B3L236 (3 bits away from this cluster)

Group of orthologs #214. Best score 46 bits
Score difference with first non-orthologous sequence - H.salinarum:46 P.knowlesi:46

Q9HQH3              	100.00%		B3LBJ2              	100.00%
Bootstrap support for Q9HQH3 as seed ortholog is 100%.
Bootstrap support for B3LBJ2 as seed ortholog is 100%.

Group of orthologs #215. Best score 45 bits
Score difference with first non-orthologous sequence - H.salinarum:45 P.knowlesi:45

Q9HPC0              	100.00%		B3KZ04              	100.00%
Bootstrap support for Q9HPC0 as seed ortholog is 100%.
Bootstrap support for B3KZ04 as seed ortholog is 100%.

Group of orthologs #216. Best score 45 bits
Score difference with first non-orthologous sequence - H.salinarum:45 P.knowlesi:45

Q9HNP6              	100.00%		B3L399              	100.00%
Bootstrap support for Q9HNP6 as seed ortholog is 100%.
Bootstrap support for B3L399 as seed ortholog is 100%.

Group of orthologs #217. Best score 45 bits
Score difference with first non-orthologous sequence - H.salinarum:45 P.knowlesi:45

Q9HNH4              	100.00%		B3L7W4              	100.00%
Bootstrap support for Q9HNH4 as seed ortholog is 100%.
Bootstrap support for B3L7W4 as seed ortholog is 100%.

Group of orthologs #218. Best score 45 bits
Score difference with first non-orthologous sequence - H.salinarum:45 P.knowlesi:45

Q9HME3              	100.00%		B3LD77              	100.00%
Bootstrap support for Q9HME3 as seed ortholog is 100%.
Bootstrap support for B3LD77 as seed ortholog is 100%.

Group of orthologs #219. Best score 45 bits
Score difference with first non-orthologous sequence - H.salinarum:45 P.knowlesi:45

Q9HQE6              	100.00%		B3LCE5              	100.00%
Bootstrap support for Q9HQE6 as seed ortholog is 100%.
Bootstrap support for B3LCE5 as seed ortholog is 100%.

Group of orthologs #220. Best score 44 bits
Score difference with first non-orthologous sequence - H.salinarum:44 P.knowlesi:44

O54661              	100.00%		B3KZZ3              	100.00%
O54647              	28.31%		B3LB42              	18.54%
Q9HS22              	17.21%		
Bootstrap support for O54661 as seed ortholog is 100%.
Bootstrap support for B3KZZ3 as seed ortholog is 100%.

Group of orthologs #221. Best score 42 bits
Score difference with first non-orthologous sequence - H.salinarum:42 P.knowlesi:42

Q9HQC0              	100.00%		B3L3U6              	100.00%
Q9HRF6              	13.42%		B3KZA6              	20.16%
Bootstrap support for Q9HQC0 as seed ortholog is 100%.
Bootstrap support for B3L3U6 as seed ortholog is 100%.

Group of orthologs #222. Best score 42 bits
Score difference with first non-orthologous sequence - H.salinarum:42 P.knowlesi:42

Q9HP11              	100.00%		B3L105              	100.00%
Q9HPV9              	17.25%		
Bootstrap support for Q9HP11 as seed ortholog is 100%.
Bootstrap support for B3L105 as seed ortholog is 100%.

Group of orthologs #223. Best score 42 bits
Score difference with first non-orthologous sequence - H.salinarum:42 P.knowlesi:42

Q9HNG2              	100.00%		B3L6D8              	100.00%
Bootstrap support for Q9HNG2 as seed ortholog is 100%.
Bootstrap support for B3L6D8 as seed ortholog is 100%.

Group of orthologs #224. Best score 41 bits
Score difference with first non-orthologous sequence - H.salinarum:41 P.knowlesi:41

Q9HNQ6              	100.00%		B3LBD4              	100.00%
Bootstrap support for Q9HNQ6 as seed ortholog is 100%.
Bootstrap support for B3LBD4 as seed ortholog is 100%.

Group of orthologs #225. Best score 41 bits
Score difference with first non-orthologous sequence - H.salinarum:41 P.knowlesi:41

Q9V2W0              	100.00%		B3L8I5              	100.00%
Bootstrap support for Q9V2W0 as seed ortholog is 100%.
Bootstrap support for B3L8I5 as seed ortholog is 100%.