###################################
358 groups of orthologs
421 in-paralogs from H.salinarum
646 in-paralogs from L.chalumnae
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 672 bits
Score difference with first non-orthologous sequence - H.salinarum:672 L.chalumnae:672

Q9HP43              	100.00%		H3AH65              	100.00%
                    	       		H3AU29              	31.94%
Bootstrap support for Q9HP43 as seed ortholog is 100%.
Bootstrap support for H3AH65 as seed ortholog is 100%.

Group of orthologs #2. Best score 624 bits
Score difference with first non-orthologous sequence - H.salinarum:346 L.chalumnae:440

Q9HPQ0              	100.00%		H3ATU0              	100.00%
Bootstrap support for Q9HPQ0 as seed ortholog is 100%.
Bootstrap support for H3ATU0 as seed ortholog is 100%.

Group of orthologs #3. Best score 591 bits
Score difference with first non-orthologous sequence - H.salinarum:258 L.chalumnae:111

Q9HPF0              	100.00%		H3B882              	100.00%
Q9HPU1              	19.95%		H3AWB6              	56.59%
Q9HHW2              	19.38%		
Bootstrap support for Q9HPF0 as seed ortholog is 100%.
Bootstrap support for H3B882 as seed ortholog is 99%.

Group of orthologs #4. Best score 571 bits
Score difference with first non-orthologous sequence - H.salinarum:571 L.chalumnae:318

P0CX02              	100.00%		H3BGV0              	100.00%
Bootstrap support for P0CX02 as seed ortholog is 100%.
Bootstrap support for H3BGV0 as seed ortholog is 100%.

Group of orthologs #5. Best score 554 bits
Score difference with first non-orthologous sequence - H.salinarum:554 L.chalumnae:56

Q9HRY2              	100.00%		H3AL07              	100.00%
Bootstrap support for Q9HRY2 as seed ortholog is 100%.
Bootstrap support for H3AL07 as seed ortholog is 88%.

Group of orthologs #6. Best score 542 bits
Score difference with first non-orthologous sequence - H.salinarum:542 L.chalumnae:542

Q9HNE3              	100.00%		H3AJG5              	100.00%
Bootstrap support for Q9HNE3 as seed ortholog is 100%.
Bootstrap support for H3AJG5 as seed ortholog is 100%.

Group of orthologs #7. Best score 519 bits
Score difference with first non-orthologous sequence - H.salinarum:197 L.chalumnae:162

Q9HQU8              	100.00%		H3BGI7              	100.00%
                    	       		H3AW63              	6.20%
Bootstrap support for Q9HQU8 as seed ortholog is 99%.
Bootstrap support for H3BGI7 as seed ortholog is 99%.

Group of orthologs #8. Best score 500 bits
Score difference with first non-orthologous sequence - H.salinarum:500 L.chalumnae:500

P0CX03              	100.00%		H3A0Y3              	100.00%
                    	       		H3BBW8              	14.07%
Bootstrap support for P0CX03 as seed ortholog is 100%.
Bootstrap support for H3A0Y3 as seed ortholog is 100%.

Group of orthologs #9. Best score 483 bits
Score difference with first non-orthologous sequence - H.salinarum:483 L.chalumnae:483

Q9HRZ1              	100.00%		H3AL63              	100.00%
Bootstrap support for Q9HRZ1 as seed ortholog is 100%.
Bootstrap support for H3AL63 as seed ortholog is 100%.

Group of orthologs #10. Best score 477 bits
Score difference with first non-orthologous sequence - H.salinarum:477 L.chalumnae:363

Q9HN72              	100.00%		H3A922              	100.00%
Bootstrap support for Q9HN72 as seed ortholog is 100%.
Bootstrap support for H3A922 as seed ortholog is 100%.

Group of orthologs #11. Best score 476 bits
Score difference with first non-orthologous sequence - H.salinarum:476 L.chalumnae:363

Q9HNE4              	100.00%		H3BB48              	100.00%
                    	       		H3A405              	43.33%
Bootstrap support for Q9HNE4 as seed ortholog is 100%.
Bootstrap support for H3BB48 as seed ortholog is 100%.

Group of orthologs #12. Best score 471 bits
Score difference with first non-orthologous sequence - H.salinarum:471 L.chalumnae:390

Q9HMC1              	100.00%		H3B017              	100.00%
Bootstrap support for Q9HMC1 as seed ortholog is 100%.
Bootstrap support for H3B017 as seed ortholog is 100%.

Group of orthologs #13. Best score 464 bits
Score difference with first non-orthologous sequence - H.salinarum:325 L.chalumnae:464

Q9HMU3              	100.00%		H3AI30              	100.00%
Bootstrap support for Q9HMU3 as seed ortholog is 100%.
Bootstrap support for H3AI30 as seed ortholog is 100%.

Group of orthologs #14. Best score 464 bits
Score difference with first non-orthologous sequence - H.salinarum:464 L.chalumnae:185

Q9HN97              	100.00%		H3BI03              	100.00%
Bootstrap support for Q9HN97 as seed ortholog is 100%.
Bootstrap support for H3BI03 as seed ortholog is 99%.

Group of orthologs #15. Best score 456 bits
Score difference with first non-orthologous sequence - H.salinarum:456 L.chalumnae:456

Q9HP32              	100.00%		H3B2Y2              	100.00%
Bootstrap support for Q9HP32 as seed ortholog is 100%.
Bootstrap support for H3B2Y2 as seed ortholog is 100%.

Group of orthologs #16. Best score 438 bits
Score difference with first non-orthologous sequence - H.salinarum:438 L.chalumnae:438

Q9HPP8              	100.00%		H3BFE7              	100.00%
                    	       		H3AY53              	5.54%
Bootstrap support for Q9HPP8 as seed ortholog is 100%.
Bootstrap support for H3BFE7 as seed ortholog is 100%.

Group of orthologs #17. Best score 435 bits
Score difference with first non-orthologous sequence - H.salinarum:435 L.chalumnae:162

Q9HM85              	100.00%		H3ASK6              	100.00%
                    	       		H3A6N0              	87.83%
                    	       		H3AYF8              	14.21%
                    	       		H3B8T1              	6.42%
Bootstrap support for Q9HM85 as seed ortholog is 100%.
Bootstrap support for H3ASK6 as seed ortholog is 99%.

Group of orthologs #18. Best score 435 bits
Score difference with first non-orthologous sequence - H.salinarum:435 L.chalumnae:130

Q9HNS5              	100.00%		H3BBH3              	100.00%
Bootstrap support for Q9HNS5 as seed ortholog is 100%.
Bootstrap support for H3BBH3 as seed ortholog is 99%.

Group of orthologs #19. Best score 429 bits
Score difference with first non-orthologous sequence - H.salinarum:429 L.chalumnae:386

Q9HP27              	100.00%		H3ALQ1              	100.00%
                    	       		H3BH99              	100.00%
                    	       		H3AJS0              	32.64%
Bootstrap support for Q9HP27 as seed ortholog is 100%.
Bootstrap support for H3ALQ1 as seed ortholog is 100%.
Bootstrap support for H3BH99 as seed ortholog is 100%.

Group of orthologs #20. Best score 425 bits
Score difference with first non-orthologous sequence - H.salinarum:163 L.chalumnae:267

Q9HRH2              	100.00%		H3A9P8              	100.00%
                    	       		H3AWQ6              	15.97%
Bootstrap support for Q9HRH2 as seed ortholog is 99%.
Bootstrap support for H3A9P8 as seed ortholog is 100%.

Group of orthologs #21. Best score 420 bits
Score difference with first non-orthologous sequence - H.salinarum:420 L.chalumnae:167

Q9HM89              	100.00%		H3B696              	100.00%
                    	       		H3A0X9              	73.26%
                    	       		H3B6F8              	66.10%
                    	       		H3A468              	51.41%
                    	       		H3A5A9              	36.35%
Bootstrap support for Q9HM89 as seed ortholog is 100%.
Bootstrap support for H3B696 as seed ortholog is 100%.

Group of orthologs #22. Best score 395 bits
Score difference with first non-orthologous sequence - H.salinarum:296 L.chalumnae:395

P33518              	100.00%		O03167              	100.00%
Bootstrap support for P33518 as seed ortholog is 100%.
Bootstrap support for O03167 as seed ortholog is 100%.

Group of orthologs #23. Best score 389 bits
Score difference with first non-orthologous sequence - H.salinarum:389 L.chalumnae:389

Q9HPR3              	100.00%		H3ADM5              	100.00%
Bootstrap support for Q9HPR3 as seed ortholog is 100%.
Bootstrap support for H3ADM5 as seed ortholog is 100%.

Group of orthologs #24. Best score 385 bits
Score difference with first non-orthologous sequence - H.salinarum:385 L.chalumnae:385

Q9HQ68              	100.00%		H3AYV1              	100.00%
Bootstrap support for Q9HQ68 as seed ortholog is 100%.
Bootstrap support for H3AYV1 as seed ortholog is 100%.

Group of orthologs #25. Best score 379 bits
Score difference with first non-orthologous sequence - H.salinarum:217 L.chalumnae:379

Q9HQ66              	100.00%		H3AEC4              	100.00%
Bootstrap support for Q9HQ66 as seed ortholog is 99%.
Bootstrap support for H3AEC4 as seed ortholog is 100%.

Group of orthologs #26. Best score 372 bits
Score difference with first non-orthologous sequence - H.salinarum:62 L.chalumnae:372

Q9HQG7              	100.00%		H2ZZ12              	100.00%
Bootstrap support for Q9HQG7 as seed ortholog is 96%.
Bootstrap support for H2ZZ12 as seed ortholog is 100%.

Group of orthologs #27. Best score 365 bits
Score difference with first non-orthologous sequence - H.salinarum:365 L.chalumnae:365

Q9HPV7              	100.00%		H3AYT4              	100.00%
Bootstrap support for Q9HPV7 as seed ortholog is 100%.
Bootstrap support for H3AYT4 as seed ortholog is 100%.

Group of orthologs #28. Best score 361 bits
Score difference with first non-orthologous sequence - H.salinarum:361 L.chalumnae:361

Q9HQ29              	100.00%		H3AFD7              	100.00%
Bootstrap support for Q9HQ29 as seed ortholog is 100%.
Bootstrap support for H3AFD7 as seed ortholog is 100%.

Group of orthologs #29. Best score 352 bits
Score difference with first non-orthologous sequence - H.salinarum:352 L.chalumnae:240

Q9HNK9              	100.00%		H2ZXA7              	100.00%
Bootstrap support for Q9HNK9 as seed ortholog is 100%.
Bootstrap support for H2ZXA7 as seed ortholog is 100%.

Group of orthologs #30. Best score 350 bits
Score difference with first non-orthologous sequence - H.salinarum:350 L.chalumnae:3

Q9HN70              	100.00%		H3BFD1              	100.00%
Q9HNI0              	33.20%		
Bootstrap support for Q9HN70 as seed ortholog is 100%.
Bootstrap support for H3BFD1 as seed ortholog is 55%.
Alternative seed ortholog is H2ZYP0 (3 bits away from this cluster)

Group of orthologs #31. Best score 342 bits
Score difference with first non-orthologous sequence - H.salinarum:342 L.chalumnae:342

Q9HQD5              	100.00%		H2ZTU5              	100.00%
                    	       		H2ZZT5              	47.54%
Bootstrap support for Q9HQD5 as seed ortholog is 100%.
Bootstrap support for H2ZTU5 as seed ortholog is 100%.

Group of orthologs #32. Best score 341 bits
Score difference with first non-orthologous sequence - H.salinarum:341 L.chalumnae:2

Q9HNA5              	100.00%		H3B172              	100.00%
Bootstrap support for Q9HNA5 as seed ortholog is 100%.
Bootstrap support for H3B172 as seed ortholog is 53%.
Alternative seed ortholog is H3AS78 (2 bits away from this cluster)

Group of orthologs #33. Best score 339 bits
Score difference with first non-orthologous sequence - H.salinarum:339 L.chalumnae:339

Q9HN78              	100.00%		H3ABS4              	100.00%
Bootstrap support for Q9HN78 as seed ortholog is 100%.
Bootstrap support for H3ABS4 as seed ortholog is 100%.

Group of orthologs #34. Best score 338 bits
Score difference with first non-orthologous sequence - H.salinarum:338 L.chalumnae:338

Q9HT00              	100.00%		H3BG06              	100.00%
                    	       		H3A6Q5              	62.02%
                    	       		H3B5P0              	60.20%
Bootstrap support for Q9HT00 as seed ortholog is 100%.
Bootstrap support for H3BG06 as seed ortholog is 100%.

Group of orthologs #35. Best score 334 bits
Score difference with first non-orthologous sequence - H.salinarum:18 L.chalumnae:52

Q9HRI6              	100.00%		H3BF73              	100.00%
Bootstrap support for Q9HRI6 as seed ortholog is 72%.
Alternative seed ortholog is Q9HPT2 (18 bits away from this cluster)
Bootstrap support for H3BF73 as seed ortholog is 94%.

Group of orthologs #36. Best score 326 bits
Score difference with first non-orthologous sequence - H.salinarum:157 L.chalumnae:34

Q9HRW6              	100.00%		H3B286              	100.00%
Q9HNP9              	35.70%		
Bootstrap support for Q9HRW6 as seed ortholog is 99%.
Bootstrap support for H3B286 as seed ortholog is 82%.

Group of orthologs #37. Best score 326 bits
Score difference with first non-orthologous sequence - H.salinarum:326 L.chalumnae:326

Q9HQD8              	100.00%		H3AVF4              	100.00%
Bootstrap support for Q9HQD8 as seed ortholog is 100%.
Bootstrap support for H3AVF4 as seed ortholog is 100%.

Group of orthologs #38. Best score 307 bits
Score difference with first non-orthologous sequence - H.salinarum:307 L.chalumnae:229

Q9HMW7              	100.00%		H3A0G7              	100.00%
Bootstrap support for Q9HMW7 as seed ortholog is 100%.
Bootstrap support for H3A0G7 as seed ortholog is 100%.

Group of orthologs #39. Best score 302 bits
Score difference with first non-orthologous sequence - H.salinarum:302 L.chalumnae:302

Q9HPY5              	100.00%		H3BII8              	100.00%
                    	       		H3AND8              	31.96%
Bootstrap support for Q9HPY5 as seed ortholog is 100%.
Bootstrap support for H3BII8 as seed ortholog is 100%.

Group of orthologs #40. Best score 302 bits
Score difference with first non-orthologous sequence - H.salinarum:302 L.chalumnae:26

Q9HS95              	100.00%		H3AP88              	100.00%
Bootstrap support for Q9HS95 as seed ortholog is 100%.
Bootstrap support for H3AP88 as seed ortholog is 63%.
Alternative seed ortholog is H3AQW1 (26 bits away from this cluster)

Group of orthologs #41. Best score 294 bits
Score difference with first non-orthologous sequence - H.salinarum:294 L.chalumnae:294

Q9HQM6              	100.00%		H2ZYA8              	100.00%
                    	       		H3BDJ1              	49.60%
                    	       		H3AR52              	43.46%
Bootstrap support for Q9HQM6 as seed ortholog is 100%.
Bootstrap support for H2ZYA8 as seed ortholog is 100%.

Group of orthologs #42. Best score 294 bits
Score difference with first non-orthologous sequence - H.salinarum:294 L.chalumnae:294

Q9HPP0              	100.00%		H3A2G3              	100.00%
Bootstrap support for Q9HPP0 as seed ortholog is 100%.
Bootstrap support for H3A2G3 as seed ortholog is 100%.

Group of orthologs #43. Best score 292 bits
Score difference with first non-orthologous sequence - H.salinarum:292 L.chalumnae:292

Q9HMN5              	100.00%		H3BEP0              	100.00%
Bootstrap support for Q9HMN5 as seed ortholog is 100%.
Bootstrap support for H3BEP0 as seed ortholog is 100%.

Group of orthologs #44. Best score 287 bits
Score difference with first non-orthologous sequence - H.salinarum:287 L.chalumnae:287

Q9HPS4              	100.00%		H3A587              	100.00%
Bootstrap support for Q9HPS4 as seed ortholog is 100%.
Bootstrap support for H3A587 as seed ortholog is 100%.

Group of orthologs #45. Best score 287 bits
Score difference with first non-orthologous sequence - H.salinarum:287 L.chalumnae:184

Q9HR43              	100.00%		H3B7X9              	100.00%
Bootstrap support for Q9HR43 as seed ortholog is 100%.
Bootstrap support for H3B7X9 as seed ortholog is 99%.

Group of orthologs #46. Best score 285 bits
Score difference with first non-orthologous sequence - H.salinarum:285 L.chalumnae:285

Q9HN50              	100.00%		H3BIH2              	100.00%
                    	       		M3XHX9              	23.84%
                    	       		M3XH88              	23.71%
Bootstrap support for Q9HN50 as seed ortholog is 100%.
Bootstrap support for H3BIH2 as seed ortholog is 100%.

Group of orthologs #47. Best score 276 bits
Score difference with first non-orthologous sequence - H.salinarum:276 L.chalumnae:276

Q9HSA5              	100.00%		H3ATJ8              	100.00%
                    	       		H3AAG4              	66.84%
Bootstrap support for Q9HSA5 as seed ortholog is 100%.
Bootstrap support for H3ATJ8 as seed ortholog is 100%.

Group of orthologs #48. Best score 273 bits
Score difference with first non-orthologous sequence - H.salinarum:273 L.chalumnae:273

Q9HN80              	100.00%		H3B5Z7              	100.00%
                    	       		H2ZS81              	33.68%
Bootstrap support for Q9HN80 as seed ortholog is 100%.
Bootstrap support for H3B5Z7 as seed ortholog is 100%.

Group of orthologs #49. Best score 269 bits
Score difference with first non-orthologous sequence - H.salinarum:269 L.chalumnae:269

P17103              	100.00%		H3B5H5              	100.00%
                    	       		H3BBC2              	31.33%
Bootstrap support for P17103 as seed ortholog is 100%.
Bootstrap support for H3B5H5 as seed ortholog is 100%.

Group of orthologs #50. Best score 267 bits
Score difference with first non-orthologous sequence - H.salinarum:267 L.chalumnae:59

Q9HSL6              	100.00%		H3B5L6              	100.00%
Q9HSM2              	25.95%		
Bootstrap support for Q9HSL6 as seed ortholog is 100%.
Bootstrap support for H3B5L6 as seed ortholog is 85%.

Group of orthologs #51. Best score 265 bits
Score difference with first non-orthologous sequence - H.salinarum:265 L.chalumnae:265

Q9HSM4              	100.00%		H3AD65              	100.00%
Q9HQE1              	25.79%		
Q9HRM7              	16.31%		
Bootstrap support for Q9HSM4 as seed ortholog is 100%.
Bootstrap support for H3AD65 as seed ortholog is 100%.

Group of orthologs #52. Best score 263 bits
Score difference with first non-orthologous sequence - H.salinarum:36 L.chalumnae:20

Q9HMJ6              	100.00%		M3XGL4              	100.00%
                    	       		H3ATS6              	64.71%
                    	       		H3BEP7              	58.60%
                    	       		H3AUS8              	52.61%
                    	       		H3A505              	19.49%
                    	       		H3B2E7              	13.76%
                    	       		H3AEA3              	11.21%
                    	       		H3ANS0              	6.37%
Bootstrap support for Q9HMJ6 as seed ortholog is 75%.
Bootstrap support for M3XGL4 as seed ortholog is 72%.
Alternative seed ortholog is H3A561 (20 bits away from this cluster)

Group of orthologs #53. Best score 260 bits
Score difference with first non-orthologous sequence - H.salinarum:260 L.chalumnae:47

Q9HMG9              	100.00%		H2ZWJ3              	100.00%
                    	       		H3B5X3              	36.69%
Bootstrap support for Q9HMG9 as seed ortholog is 100%.
Bootstrap support for H2ZWJ3 as seed ortholog is 77%.

Group of orthologs #54. Best score 256 bits
Score difference with first non-orthologous sequence - H.salinarum:202 L.chalumnae:71

Q9HNK4              	100.00%		H3B895              	100.00%
Bootstrap support for Q9HNK4 as seed ortholog is 100%.
Bootstrap support for H3B895 as seed ortholog is 97%.

Group of orthologs #55. Best score 256 bits
Score difference with first non-orthologous sequence - H.salinarum:152 L.chalumnae:27

Q9HN27              	100.00%		H3BBL3              	100.00%
Bootstrap support for Q9HN27 as seed ortholog is 99%.
Bootstrap support for H3BBL3 as seed ortholog is 79%.

Group of orthologs #56. Best score 254 bits
Score difference with first non-orthologous sequence - H.salinarum:254 L.chalumnae:6

Q9HSQ7              	100.00%		H3A5A8              	100.00%
                    	       		H3AJ22              	13.89%
                    	       		H3BEA5              	11.82%
                    	       		H3B2B9              	10.70%
                    	       		H3B1R8              	9.40%
Bootstrap support for Q9HSQ7 as seed ortholog is 100%.
Bootstrap support for H3A5A8 as seed ortholog is 66%.
Alternative seed ortholog is H3BEA4 (6 bits away from this cluster)

Group of orthologs #57. Best score 253 bits
Score difference with first non-orthologous sequence - H.salinarum:253 L.chalumnae:78

Q9HQU4              	100.00%		H3AIE0              	100.00%
                    	       		H3A423              	55.05%
Bootstrap support for Q9HQU4 as seed ortholog is 100%.
Bootstrap support for H3AIE0 as seed ortholog is 97%.

Group of orthologs #58. Best score 253 bits
Score difference with first non-orthologous sequence - H.salinarum:253 L.chalumnae:253

Q9HMZ1              	100.00%		H3BAS9              	100.00%
Bootstrap support for Q9HMZ1 as seed ortholog is 100%.
Bootstrap support for H3BAS9 as seed ortholog is 100%.

Group of orthologs #59. Best score 247 bits
Score difference with first non-orthologous sequence - H.salinarum:247 L.chalumnae:247

Q9HRL9              	100.00%		H3A550              	100.00%
Bootstrap support for Q9HRL9 as seed ortholog is 100%.
Bootstrap support for H3A550 as seed ortholog is 100%.

Group of orthologs #60. Best score 247 bits
Score difference with first non-orthologous sequence - H.salinarum:146 L.chalumnae:88

Q9HMK7              	100.00%		H3ARV6              	100.00%
Bootstrap support for Q9HMK7 as seed ortholog is 99%.
Bootstrap support for H3ARV6 as seed ortholog is 99%.

Group of orthologs #61. Best score 245 bits
Score difference with first non-orthologous sequence - H.salinarum:4 L.chalumnae:36

Q9HQF0              	100.00%		H3AJC1              	100.00%
Q9HS75              	8.25%		
Bootstrap support for Q9HQF0 as seed ortholog is 55%.
Alternative seed ortholog is Q9HPT2 (4 bits away from this cluster)
Bootstrap support for H3AJC1 as seed ortholog is 87%.

Group of orthologs #62. Best score 236 bits
Score difference with first non-orthologous sequence - H.salinarum:236 L.chalumnae:94

Q9HSA4              	100.00%		H3BHT6              	100.00%
Bootstrap support for Q9HSA4 as seed ortholog is 100%.
Bootstrap support for H3BHT6 as seed ortholog is 97%.

Group of orthologs #63. Best score 234 bits
Score difference with first non-orthologous sequence - H.salinarum:234 L.chalumnae:123

Q9HN77              	100.00%		H3BFU7              	100.00%
Q9HNV6              	12.16%		
Bootstrap support for Q9HN77 as seed ortholog is 100%.
Bootstrap support for H3BFU7 as seed ortholog is 99%.

Group of orthologs #64. Best score 232 bits
Score difference with first non-orthologous sequence - H.salinarum:232 L.chalumnae:96

Q9HMF1              	100.00%		H3AUZ5              	100.00%
Bootstrap support for Q9HMF1 as seed ortholog is 100%.
Bootstrap support for H3AUZ5 as seed ortholog is 97%.

Group of orthologs #65. Best score 230 bits
Score difference with first non-orthologous sequence - H.salinarum:230 L.chalumnae:230

Q9HPX2              	100.00%		H3ASP8              	100.00%
Bootstrap support for Q9HPX2 as seed ortholog is 100%.
Bootstrap support for H3ASP8 as seed ortholog is 100%.

Group of orthologs #66. Best score 228 bits
Score difference with first non-orthologous sequence - H.salinarum:228 L.chalumnae:228

Q9HQL9              	100.00%		H3B5Y6              	100.00%
                    	       		H3AIF6              	6.96%
Bootstrap support for Q9HQL9 as seed ortholog is 100%.
Bootstrap support for H3B5Y6 as seed ortholog is 100%.

Group of orthologs #67. Best score 227 bits
Score difference with first non-orthologous sequence - H.salinarum:227 L.chalumnae:227

Q9HPP1              	100.00%		H3AZX5              	100.00%
                    	       		H3ALN3              	17.52%
Bootstrap support for Q9HPP1 as seed ortholog is 100%.
Bootstrap support for H3AZX5 as seed ortholog is 100%.

Group of orthologs #68. Best score 224 bits
Score difference with first non-orthologous sequence - H.salinarum:224 L.chalumnae:224

Q9HPY4              	100.00%		H3AQR4              	100.00%
                    	       		H2ZVQ9              	54.81%
Bootstrap support for Q9HPY4 as seed ortholog is 100%.
Bootstrap support for H3AQR4 as seed ortholog is 100%.

Group of orthologs #69. Best score 222 bits
Score difference with first non-orthologous sequence - H.salinarum:222 L.chalumnae:161

Q9HQI9              	100.00%		H3B7K3              	100.00%
                    	       		H3B528              	81.33%
                    	       		H2ZXR3              	64.20%
Bootstrap support for Q9HQI9 as seed ortholog is 100%.
Bootstrap support for H3B7K3 as seed ortholog is 100%.

Group of orthologs #70. Best score 222 bits
Score difference with first non-orthologous sequence - H.salinarum:222 L.chalumnae:222

Q9HPR8              	100.00%		H3B0T2              	100.00%
Bootstrap support for Q9HPR8 as seed ortholog is 100%.
Bootstrap support for H3B0T2 as seed ortholog is 100%.

Group of orthologs #71. Best score 222 bits
Score difference with first non-orthologous sequence - H.salinarum:222 L.chalumnae:73

Q9HPE4              	100.00%		M3XKS9              	100.00%
Bootstrap support for Q9HPE4 as seed ortholog is 100%.
Bootstrap support for M3XKS9 as seed ortholog is 95%.

Group of orthologs #72. Best score 217 bits
Score difference with first non-orthologous sequence - H.salinarum:139 L.chalumnae:217

Q48296              	100.00%		H3B664              	100.00%
Bootstrap support for Q48296 as seed ortholog is 99%.
Bootstrap support for H3B664 as seed ortholog is 100%.

Group of orthologs #73. Best score 216 bits
Score difference with first non-orthologous sequence - H.salinarum:216 L.chalumnae:216

Q9HHN5              	100.00%		H2ZSX7              	100.00%
                    	       		H3AGN3              	22.21%
                    	       		H3AYB3              	20.05%
                    	       		H3AVK1              	19.59%
                    	       		H2ZXB4              	18.91%
                    	       		H3B3T8              	18.00%
                    	       		H3B1Q1              	17.88%
                    	       		H3A4V9              	14.58%
Bootstrap support for Q9HHN5 as seed ortholog is 100%.
Bootstrap support for H2ZSX7 as seed ortholog is 100%.

Group of orthologs #74. Best score 216 bits
Score difference with first non-orthologous sequence - H.salinarum:61 L.chalumnae:57

Q9HQ43              	100.00%		M3XKY6              	100.00%
Bootstrap support for Q9HQ43 as seed ortholog is 90%.
Bootstrap support for M3XKY6 as seed ortholog is 87%.

Group of orthologs #75. Best score 215 bits
Score difference with first non-orthologous sequence - H.salinarum:163 L.chalumnae:24

Q9HQJ7              	100.00%		H3A6N9              	100.00%
Bootstrap support for Q9HQJ7 as seed ortholog is 99%.
Bootstrap support for H3A6N9 as seed ortholog is 78%.

Group of orthologs #76. Best score 214 bits
Score difference with first non-orthologous sequence - H.salinarum:214 L.chalumnae:49

O07683              	100.00%		H3ANZ0              	100.00%
Bootstrap support for O07683 as seed ortholog is 100%.
Bootstrap support for H3ANZ0 as seed ortholog is 86%.

Group of orthologs #77. Best score 212 bits
Score difference with first non-orthologous sequence - H.salinarum:212 L.chalumnae:212

Q9HSW5              	100.00%		H3A521              	100.00%
Q9HQQ9              	55.61%		H3ACS4              	43.51%
Bootstrap support for Q9HSW5 as seed ortholog is 100%.
Bootstrap support for H3A521 as seed ortholog is 100%.

Group of orthologs #78. Best score 212 bits
Score difference with first non-orthologous sequence - H.salinarum:212 L.chalumnae:212

Q9HMK3              	100.00%		H2ZZN4              	100.00%
Bootstrap support for Q9HMK3 as seed ortholog is 100%.
Bootstrap support for H2ZZN4 as seed ortholog is 100%.

Group of orthologs #79. Best score 212 bits
Score difference with first non-orthologous sequence - H.salinarum:212 L.chalumnae:4

Q9HN75              	100.00%		H3B073              	100.00%
Bootstrap support for Q9HN75 as seed ortholog is 100%.
Bootstrap support for H3B073 as seed ortholog is 61%.
Alternative seed ortholog is H3BI08 (4 bits away from this cluster)

Group of orthologs #80. Best score 211 bits
Score difference with first non-orthologous sequence - H.salinarum:211 L.chalumnae:147

Q9HPD1              	100.00%		H3ADI2              	100.00%
                    	       		H3AA59              	16.29%
Bootstrap support for Q9HPD1 as seed ortholog is 100%.
Bootstrap support for H3ADI2 as seed ortholog is 99%.

Group of orthologs #81. Best score 210 bits
Score difference with first non-orthologous sequence - H.salinarum:210 L.chalumnae:210

Q9HMR0              	100.00%		H3B186              	100.00%
Bootstrap support for Q9HMR0 as seed ortholog is 100%.
Bootstrap support for H3B186 as seed ortholog is 100%.

Group of orthologs #82. Best score 209 bits
Score difference with first non-orthologous sequence - H.salinarum:209 L.chalumnae:38

Q9HSM6              	100.00%		M3XJ87              	100.00%
Bootstrap support for Q9HSM6 as seed ortholog is 100%.
Bootstrap support for M3XJ87 as seed ortholog is 79%.

Group of orthologs #83. Best score 208 bits
Score difference with first non-orthologous sequence - H.salinarum:208 L.chalumnae:128

Q9HNL6              	100.00%		H3AJZ4              	100.00%
Bootstrap support for Q9HNL6 as seed ortholog is 100%.
Bootstrap support for H3AJZ4 as seed ortholog is 99%.

Group of orthologs #84. Best score 208 bits
Score difference with first non-orthologous sequence - H.salinarum:208 L.chalumnae:208

Q9HMV6              	100.00%		H3ARN5              	100.00%
Bootstrap support for Q9HMV6 as seed ortholog is 100%.
Bootstrap support for H3ARN5 as seed ortholog is 100%.

Group of orthologs #85. Best score 208 bits
Score difference with first non-orthologous sequence - H.salinarum:208 L.chalumnae:208

Q9HMP3              	100.00%		H3BDH3              	100.00%
Bootstrap support for Q9HMP3 as seed ortholog is 100%.
Bootstrap support for H3BDH3 as seed ortholog is 100%.

Group of orthologs #86. Best score 202 bits
Score difference with first non-orthologous sequence - H.salinarum:202 L.chalumnae:117

Q9HRI4              	100.00%		H3A1I3              	100.00%
Bootstrap support for Q9HRI4 as seed ortholog is 100%.
Bootstrap support for H3A1I3 as seed ortholog is 99%.

Group of orthologs #87. Best score 202 bits
Score difference with first non-orthologous sequence - H.salinarum:202 L.chalumnae:202

Q9HRL3              	100.00%		O03174              	100.00%
Bootstrap support for Q9HRL3 as seed ortholog is 100%.
Bootstrap support for O03174 as seed ortholog is 100%.

Group of orthologs #88. Best score 201 bits
Score difference with first non-orthologous sequence - H.salinarum:201 L.chalumnae:201

Q9HMI4              	100.00%		H3AJ76              	100.00%
                    	       		H2ZY13              	50.46%
                    	       		H2ZRX0              	15.61%
Bootstrap support for Q9HMI4 as seed ortholog is 100%.
Bootstrap support for H3AJ76 as seed ortholog is 100%.

Group of orthologs #89. Best score 201 bits
Score difference with first non-orthologous sequence - H.salinarum:201 L.chalumnae:201

Q9HNF0              	100.00%		H3A5F9              	100.00%
Bootstrap support for Q9HNF0 as seed ortholog is 100%.
Bootstrap support for H3A5F9 as seed ortholog is 100%.

Group of orthologs #90. Best score 197 bits
Score difference with first non-orthologous sequence - H.salinarum:197 L.chalumnae:4

Q9HNK0              	100.00%		H3AJJ4              	100.00%
                    	       		H3AAB0              	70.38%
                    	       		H3ARP6              	62.52%
                    	       		H3AXU8              	53.60%
                    	       		H3A4A6              	9.90%
                    	       		H3A108              	9.74%
Bootstrap support for Q9HNK0 as seed ortholog is 100%.
Bootstrap support for H3AJJ4 as seed ortholog is 54%.
Alternative seed ortholog is H3A9S1 (4 bits away from this cluster)

Group of orthologs #91. Best score 196 bits
Score difference with first non-orthologous sequence - H.salinarum:196 L.chalumnae:196

Q9HNZ7              	100.00%		H3A7L7              	100.00%
                    	       		H3AFA1              	18.95%
                    	       		H3AHE6              	13.88%
                    	       		M3XIQ8              	13.51%
Bootstrap support for Q9HNZ7 as seed ortholog is 100%.
Bootstrap support for H3A7L7 as seed ortholog is 100%.

Group of orthologs #92. Best score 195 bits
Score difference with first non-orthologous sequence - H.salinarum:195 L.chalumnae:195

Q9HS90              	100.00%		H3AKB8              	100.00%
                    	       		H3B0D1              	8.31%
Bootstrap support for Q9HS90 as seed ortholog is 100%.
Bootstrap support for H3AKB8 as seed ortholog is 100%.

Group of orthologs #93. Best score 194 bits
Score difference with first non-orthologous sequence - H.salinarum:194 L.chalumnae:8

Q9HRY3              	100.00%		H2ZZ30              	100.00%
                    	       		H3A9R8              	36.06%
                    	       		H3BBT8              	34.10%
                    	       		H3A525              	24.69%
Bootstrap support for Q9HRY3 as seed ortholog is 100%.
Bootstrap support for H2ZZ30 as seed ortholog is 59%.
Alternative seed ortholog is H3A6U6 (8 bits away from this cluster)

Group of orthologs #94. Best score 193 bits
Score difference with first non-orthologous sequence - H.salinarum:193 L.chalumnae:80

Q9HP07              	100.00%		H3AB97              	100.00%
Bootstrap support for Q9HP07 as seed ortholog is 100%.
Bootstrap support for H3AB97 as seed ortholog is 96%.

Group of orthologs #95. Best score 192 bits
Score difference with first non-orthologous sequence - H.salinarum:108 L.chalumnae:192

Q9HS93              	100.00%		H3A5H3              	100.00%
Bootstrap support for Q9HS93 as seed ortholog is 99%.
Bootstrap support for H3A5H3 as seed ortholog is 100%.

Group of orthologs #96. Best score 190 bits
Score difference with first non-orthologous sequence - H.salinarum:127 L.chalumnae:37

Q9HNH6              	100.00%		H2ZWY8              	100.00%
Bootstrap support for Q9HNH6 as seed ortholog is 99%.
Bootstrap support for H2ZWY8 as seed ortholog is 84%.

Group of orthologs #97. Best score 190 bits
Score difference with first non-orthologous sequence - H.salinarum:93 L.chalumnae:138

Q9HN66              	100.00%		H3A1Z2              	100.00%
Bootstrap support for Q9HN66 as seed ortholog is 98%.
Bootstrap support for H3A1Z2 as seed ortholog is 99%.

Group of orthologs #98. Best score 190 bits
Score difference with first non-orthologous sequence - H.salinarum:190 L.chalumnae:110

Q9HST5              	100.00%		H3AHF7              	100.00%
Bootstrap support for Q9HST5 as seed ortholog is 100%.
Bootstrap support for H3AHF7 as seed ortholog is 99%.

Group of orthologs #99. Best score 190 bits
Score difference with first non-orthologous sequence - H.salinarum:190 L.chalumnae:140

Q9HN62              	100.00%		H3B715              	100.00%
Bootstrap support for Q9HN62 as seed ortholog is 100%.
Bootstrap support for H3B715 as seed ortholog is 99%.

Group of orthologs #100. Best score 188 bits
Score difference with first non-orthologous sequence - H.salinarum:188 L.chalumnae:188

Q9HPB1              	100.00%		H3AXW8              	100.00%
                    	       		H3BAN6              	63.72%
Bootstrap support for Q9HPB1 as seed ortholog is 100%.
Bootstrap support for H3AXW8 as seed ortholog is 100%.

Group of orthologs #101. Best score 188 bits
Score difference with first non-orthologous sequence - H.salinarum:188 L.chalumnae:188

Q9HMQ2              	100.00%		H3BEB4              	100.00%
Bootstrap support for Q9HMQ2 as seed ortholog is 100%.
Bootstrap support for H3BEB4 as seed ortholog is 100%.

Group of orthologs #102. Best score 186 bits
Score difference with first non-orthologous sequence - H.salinarum:186 L.chalumnae:186

Q9HNQ2              	100.00%		H3AEL6              	100.00%
Bootstrap support for Q9HNQ2 as seed ortholog is 100%.
Bootstrap support for H3AEL6 as seed ortholog is 100%.

Group of orthologs #103. Best score 186 bits
Score difference with first non-orthologous sequence - H.salinarum:186 L.chalumnae:186

Q9HQ70              	100.00%		H3ADZ0              	100.00%
Bootstrap support for Q9HQ70 as seed ortholog is 100%.
Bootstrap support for H3ADZ0 as seed ortholog is 100%.

Group of orthologs #104. Best score 180 bits
Score difference with first non-orthologous sequence - H.salinarum:113 L.chalumnae:43

Q9HRZ2              	100.00%		H3AJ74              	100.00%
                    	       		H2ZXJ7              	29.12%
                    	       		H3B270              	27.97%
                    	       		H3BEA6              	27.01%
                    	       		H3A5P5              	22.03%
                    	       		H3AXM0              	13.60%
                    	       		H2ZSJ0              	7.28%
Bootstrap support for Q9HRZ2 as seed ortholog is 99%.
Bootstrap support for H3AJ74 as seed ortholog is 89%.

Group of orthologs #105. Best score 179 bits
Score difference with first non-orthologous sequence - H.salinarum:100 L.chalumnae:70

Q9HMM4              	100.00%		H3BBZ5              	100.00%
                    	       		M3XJN0              	5.94%
Bootstrap support for Q9HMM4 as seed ortholog is 99%.
Bootstrap support for H3BBZ5 as seed ortholog is 96%.

Group of orthologs #106. Best score 178 bits
Score difference with first non-orthologous sequence - H.salinarum:178 L.chalumnae:9

Q9HN76              	100.00%		H3AWF8              	100.00%
Bootstrap support for Q9HN76 as seed ortholog is 100%.
Bootstrap support for H3AWF8 as seed ortholog is 62%.
Alternative seed ortholog is H2ZVT5 (9 bits away from this cluster)

Group of orthologs #107. Best score 177 bits
Score difference with first non-orthologous sequence - H.salinarum:177 L.chalumnae:77

Q9HSF7              	100.00%		H3ALU6              	100.00%
Q9HHK5              	69.41%		
Q9HSB3              	47.94%		
Q9HR45              	44.69%		
Q9HRE6              	42.52%		
Q9HHH8              	7.16%		
Q9HNA2              	6.07%		
Bootstrap support for Q9HSF7 as seed ortholog is 100%.
Bootstrap support for H3ALU6 as seed ortholog is 99%.

Group of orthologs #108. Best score 175 bits
Score difference with first non-orthologous sequence - H.salinarum:175 L.chalumnae:105

Q9HPA4              	100.00%		H3B206              	100.00%
Bootstrap support for Q9HPA4 as seed ortholog is 100%.
Bootstrap support for H3B206 as seed ortholog is 99%.

Group of orthologs #109. Best score 174 bits
Score difference with first non-orthologous sequence - H.salinarum:174 L.chalumnae:174

Q9HMD6              	100.00%		H2ZW51              	100.00%
Bootstrap support for Q9HMD6 as seed ortholog is 100%.
Bootstrap support for H2ZW51 as seed ortholog is 100%.

Group of orthologs #110. Best score 170 bits
Score difference with first non-orthologous sequence - H.salinarum:170 L.chalumnae:170

Q9HNY9              	100.00%		H2ZYP3              	100.00%
Bootstrap support for Q9HNY9 as seed ortholog is 100%.
Bootstrap support for H2ZYP3 as seed ortholog is 100%.

Group of orthologs #111. Best score 170 bits
Score difference with first non-orthologous sequence - H.salinarum:170 L.chalumnae:170

Q9HP36              	100.00%		H3B1H7              	100.00%
Bootstrap support for Q9HP36 as seed ortholog is 100%.
Bootstrap support for H3B1H7 as seed ortholog is 100%.

Group of orthologs #112. Best score 170 bits
Score difference with first non-orthologous sequence - H.salinarum:170 L.chalumnae:170

Q9HHN2              	100.00%		H3B800              	100.00%
Bootstrap support for Q9HHN2 as seed ortholog is 100%.
Bootstrap support for H3B800 as seed ortholog is 100%.

Group of orthologs #113. Best score 168 bits
Score difference with first non-orthologous sequence - H.salinarum:168 L.chalumnae:19

Q9HS37              	100.00%		H3B4L5              	100.00%
                    	       		M3XK02              	19.69%
                    	       		H3A3M6              	11.30%
Bootstrap support for Q9HS37 as seed ortholog is 100%.
Bootstrap support for H3B4L5 as seed ortholog is 65%.
Alternative seed ortholog is H3AI64 (19 bits away from this cluster)

Group of orthologs #114. Best score 168 bits
Score difference with first non-orthologous sequence - H.salinarum:168 L.chalumnae:1

P57697              	100.00%		H3B881              	100.00%
Bootstrap support for P57697 as seed ortholog is 100%.
Bootstrap support for H3B881 as seed ortholog is 53%.
Alternative seed ortholog is H3AU52 (1 bits away from this cluster)

Group of orthologs #115. Best score 168 bits
Score difference with first non-orthologous sequence - H.salinarum:168 L.chalumnae:168

Q9HRM8              	100.00%		H3B9E2              	100.00%
Bootstrap support for Q9HRM8 as seed ortholog is 100%.
Bootstrap support for H3B9E2 as seed ortholog is 100%.

Group of orthologs #116. Best score 167 bits
Score difference with first non-orthologous sequence - H.salinarum:68 L.chalumnae:23

Q9HHV4              	100.00%		H3A3S4              	100.00%
                    	       		H3B5G2              	13.31%
                    	       		H3B626              	11.33%
Bootstrap support for Q9HHV4 as seed ortholog is 93%.
Bootstrap support for H3A3S4 as seed ortholog is 66%.
Alternative seed ortholog is H3B6I7 (23 bits away from this cluster)

Group of orthologs #117. Best score 167 bits
Score difference with first non-orthologous sequence - H.salinarum:167 L.chalumnae:167

Q9HMN3              	100.00%		H3BEB0              	100.00%
Bootstrap support for Q9HMN3 as seed ortholog is 100%.
Bootstrap support for H3BEB0 as seed ortholog is 100%.

Group of orthologs #118. Best score 166 bits
Score difference with first non-orthologous sequence - H.salinarum:114 L.chalumnae:95

Q9HRM6              	100.00%		H3B744              	100.00%
Q9HRX4              	12.35%		H3AMZ6              	48.70%
Q9HQK2              	8.40%		
Bootstrap support for Q9HRM6 as seed ortholog is 99%.
Bootstrap support for H3B744 as seed ortholog is 98%.

Group of orthologs #119. Best score 166 bits
Score difference with first non-orthologous sequence - H.salinarum:166 L.chalumnae:166

Q9HQ65              	100.00%		H3B8R6              	100.00%
Bootstrap support for Q9HQ65 as seed ortholog is 100%.
Bootstrap support for H3B8R6 as seed ortholog is 100%.

Group of orthologs #120. Best score 166 bits
Score difference with first non-orthologous sequence - H.salinarum:166 L.chalumnae:166

Q9HNB7              	100.00%		H3BHL8              	100.00%
Bootstrap support for Q9HNB7 as seed ortholog is 100%.
Bootstrap support for H3BHL8 as seed ortholog is 100%.

Group of orthologs #121. Best score 164 bits
Score difference with first non-orthologous sequence - H.salinarum:164 L.chalumnae:62

Q9HHV3              	100.00%		H3BAS0              	100.00%
                    	       		M3XKM7              	64.58%
                    	       		H3AXV6              	44.16%
                    	       		H3A7L2              	42.86%
                    	       		H3ANG3              	15.58%
Bootstrap support for Q9HHV3 as seed ortholog is 100%.
Bootstrap support for H3BAS0 as seed ortholog is 94%.

Group of orthologs #122. Best score 163 bits
Score difference with first non-orthologous sequence - H.salinarum:163 L.chalumnae:88

Q9HMV8              	100.00%		H3AJ85              	100.00%
                    	       		H3B830              	50.72%
                    	       		H3AQL4              	49.82%
                    	       		H3AN81              	18.28%
Bootstrap support for Q9HMV8 as seed ortholog is 100%.
Bootstrap support for H3AJ85 as seed ortholog is 99%.

Group of orthologs #123. Best score 163 bits
Score difference with first non-orthologous sequence - H.salinarum:77 L.chalumnae:20

Q9HS32              	100.00%		H3A6P1              	100.00%
Bootstrap support for Q9HS32 as seed ortholog is 99%.
Bootstrap support for H3A6P1 as seed ortholog is 76%.

Group of orthologs #124. Best score 161 bits
Score difference with first non-orthologous sequence - H.salinarum:161 L.chalumnae:95

P61136              	100.00%		H3AA08              	100.00%
                    	       		H3BEM9              	21.99%
                    	       		H3AYT5              	6.81%
Bootstrap support for P61136 as seed ortholog is 100%.
Bootstrap support for H3AA08 as seed ortholog is 99%.

Group of orthologs #125. Best score 161 bits
Score difference with first non-orthologous sequence - H.salinarum:59 L.chalumnae:24

Q9HSV1              	100.00%		H3AJV0              	100.00%
Q9HSU9              	16.47%		
Bootstrap support for Q9HSV1 as seed ortholog is 93%.
Bootstrap support for H3AJV0 as seed ortholog is 72%.
Alternative seed ortholog is H3AAQ7 (24 bits away from this cluster)

Group of orthologs #126. Best score 160 bits
Score difference with first non-orthologous sequence - H.salinarum:160 L.chalumnae:160

P0CX00              	100.00%		H3B751              	100.00%
Bootstrap support for P0CX00 as seed ortholog is 100%.
Bootstrap support for H3B751 as seed ortholog is 100%.

Group of orthologs #127. Best score 159 bits
Score difference with first non-orthologous sequence - H.salinarum:159 L.chalumnae:159

Q9HQ46              	100.00%		H3AHZ5              	100.00%
Q9HP89              	22.74%		H3AQQ3              	67.08%
                    	       		H3BGM2              	43.81%
                    	       		H3AWN2              	32.67%
Bootstrap support for Q9HQ46 as seed ortholog is 100%.
Bootstrap support for H3AHZ5 as seed ortholog is 100%.

Group of orthologs #128. Best score 159 bits
Score difference with first non-orthologous sequence - H.salinarum:159 L.chalumnae:118

Q9HQC9              	100.00%		H3BDA7              	100.00%
                    	       		H3ABU5              	24.68%
Bootstrap support for Q9HQC9 as seed ortholog is 100%.
Bootstrap support for H3BDA7 as seed ortholog is 99%.

Group of orthologs #129. Best score 159 bits
Score difference with first non-orthologous sequence - H.salinarum:159 L.chalumnae:159

Q9HQH9              	100.00%		H3A6E7              	100.00%
Bootstrap support for Q9HQH9 as seed ortholog is 100%.
Bootstrap support for H3A6E7 as seed ortholog is 100%.

Group of orthologs #130. Best score 159 bits
Score difference with first non-orthologous sequence - H.salinarum:159 L.chalumnae:159

Q9HN60              	100.00%		H3B9L6              	100.00%
Bootstrap support for Q9HN60 as seed ortholog is 100%.
Bootstrap support for H3B9L6 as seed ortholog is 100%.

Group of orthologs #131. Best score 158 bits
Score difference with first non-orthologous sequence - H.salinarum:158 L.chalumnae:158

Q9HPD4              	100.00%		H3AXY9              	100.00%
                    	       		H3ABQ3              	71.22%
Bootstrap support for Q9HPD4 as seed ortholog is 100%.
Bootstrap support for H3AXY9 as seed ortholog is 100%.

Group of orthologs #132. Best score 158 bits
Score difference with first non-orthologous sequence - H.salinarum:158 L.chalumnae:40

Q9HR85              	100.00%		H3AMH7              	100.00%
Bootstrap support for Q9HR85 as seed ortholog is 100%.
Bootstrap support for H3AMH7 as seed ortholog is 82%.

Group of orthologs #133. Best score 158 bits
Score difference with first non-orthologous sequence - H.salinarum:158 L.chalumnae:158

Q9HQ61              	100.00%		H3AS84              	100.00%
Bootstrap support for Q9HQ61 as seed ortholog is 100%.
Bootstrap support for H3AS84 as seed ortholog is 100%.

Group of orthologs #134. Best score 158 bits
Score difference with first non-orthologous sequence - H.salinarum:158 L.chalumnae:158

Q9HRM0              	100.00%		H3AQY9              	100.00%
Bootstrap support for Q9HRM0 as seed ortholog is 100%.
Bootstrap support for H3AQY9 as seed ortholog is 100%.

Group of orthologs #135. Best score 157 bits
Score difference with first non-orthologous sequence - H.salinarum:157 L.chalumnae:157

Q9HR84              	100.00%		M3XKM1              	100.00%
Q9HR83              	35.81%		H3B3P2              	36.78%
Bootstrap support for Q9HR84 as seed ortholog is 100%.
Bootstrap support for M3XKM1 as seed ortholog is 100%.

Group of orthologs #136. Best score 157 bits
Score difference with first non-orthologous sequence - H.salinarum:157 L.chalumnae:157

Q9HRV9              	100.00%		H3B666              	100.00%
Bootstrap support for Q9HRV9 as seed ortholog is 100%.
Bootstrap support for H3B666 as seed ortholog is 100%.

Group of orthologs #137. Best score 157 bits
Score difference with first non-orthologous sequence - H.salinarum:157 L.chalumnae:157

Q9HSK7              	100.00%		M3XJU4              	100.00%
Bootstrap support for Q9HSK7 as seed ortholog is 100%.
Bootstrap support for M3XJU4 as seed ortholog is 100%.

Group of orthologs #138. Best score 157 bits
Score difference with first non-orthologous sequence - H.salinarum:157 L.chalumnae:157

Q9HRL2              	100.00%		O03173              	100.00%
Bootstrap support for Q9HRL2 as seed ortholog is 100%.
Bootstrap support for O03173 as seed ortholog is 100%.

Group of orthologs #139. Best score 156 bits
Score difference with first non-orthologous sequence - H.salinarum:156 L.chalumnae:156

Q9HS02              	100.00%		H3A0Q2              	100.00%
                    	       		H3ANZ8              	8.79%
Bootstrap support for Q9HS02 as seed ortholog is 100%.
Bootstrap support for H3A0Q2 as seed ortholog is 100%.

Group of orthologs #140. Best score 156 bits
Score difference with first non-orthologous sequence - H.salinarum:156 L.chalumnae:156

Q9HSK1              	100.00%		H3BG71              	100.00%
Bootstrap support for Q9HSK1 as seed ortholog is 100%.
Bootstrap support for H3BG71 as seed ortholog is 100%.

Group of orthologs #141. Best score 155 bits
Score difference with first non-orthologous sequence - H.salinarum:155 L.chalumnae:155

P09224              	100.00%		H3B6V8              	100.00%
P09737              	100.00%		
Bootstrap support for P09224 as seed ortholog is 100%.
Bootstrap support for P09737 as seed ortholog is 100%.
Bootstrap support for H3B6V8 as seed ortholog is 100%.

Group of orthologs #142. Best score 155 bits
Score difference with first non-orthologous sequence - H.salinarum:53 L.chalumnae:155

Q9HPZ0              	100.00%		H3A661              	100.00%
Bootstrap support for Q9HPZ0 as seed ortholog is 87%.
Bootstrap support for H3A661 as seed ortholog is 100%.

Group of orthologs #143. Best score 155 bits
Score difference with first non-orthologous sequence - H.salinarum:155 L.chalumnae:25

Q9HQR6              	100.00%		H3AA15              	100.00%
Bootstrap support for Q9HQR6 as seed ortholog is 100%.
Bootstrap support for H3AA15 as seed ortholog is 78%.

Group of orthologs #144. Best score 155 bits
Score difference with first non-orthologous sequence - H.salinarum:155 L.chalumnae:155

P0CX01              	100.00%		H3ANS2              	100.00%
Bootstrap support for P0CX01 as seed ortholog is 100%.
Bootstrap support for H3ANS2 as seed ortholog is 100%.

Group of orthologs #145. Best score 155 bits
Score difference with first non-orthologous sequence - H.salinarum:155 L.chalumnae:155

Q9HS79              	100.00%		H3AKV5              	100.00%
Bootstrap support for Q9HS79 as seed ortholog is 100%.
Bootstrap support for H3AKV5 as seed ortholog is 100%.

Group of orthologs #146. Best score 154 bits
Score difference with first non-orthologous sequence - H.salinarum:154 L.chalumnae:154

Q9HPB4              	100.00%		H3AZH8              	100.00%
Bootstrap support for Q9HPB4 as seed ortholog is 100%.
Bootstrap support for H3AZH8 as seed ortholog is 100%.

Group of orthologs #147. Best score 153 bits
Score difference with first non-orthologous sequence - H.salinarum:153 L.chalumnae:153

Q9HPQ2              	100.00%		H3AG86              	100.00%
Q9HHR9              	16.57%		H3B2Y8              	58.52%
                    	       		H3B302              	40.04%
                    	       		H2ZYV9              	36.25%
                    	       		H3AZL2              	31.56%
                    	       		H3BIB7              	30.57%
                    	       		H2ZRV4              	29.76%
                    	       		H3A4N3              	29.31%
                    	       		H3BDU1              	29.31%
                    	       		H3BI94              	29.04%
                    	       		H2ZWC3              	28.49%
                    	       		H3A4J1              	28.49%
                    	       		H2ZX72              	27.23%
                    	       		H3B921              	23.72%
                    	       		H3AUR4              	21.55%
                    	       		H3AQG6              	17.94%
                    	       		H3B6Q8              	17.04%
                    	       		H3AB15              	17.04%
                    	       		H3AHW6              	16.86%
                    	       		H2ZZZ4              	15.78%
                    	       		H3ADK3              	11.09%
                    	       		H3A1D8              	8.75%
Bootstrap support for Q9HPQ2 as seed ortholog is 100%.
Bootstrap support for H3AG86 as seed ortholog is 100%.

Group of orthologs #148. Best score 153 bits
Score difference with first non-orthologous sequence - H.salinarum:153 L.chalumnae:153

Q9HS43              	100.00%		H3A4D6              	100.00%
Bootstrap support for Q9HS43 as seed ortholog is 100%.
Bootstrap support for H3A4D6 as seed ortholog is 100%.

Group of orthologs #149. Best score 153 bits
Score difference with first non-orthologous sequence - H.salinarum:153 L.chalumnae:153

Q9HRJ1              	100.00%		H3AR85              	100.00%
Bootstrap support for Q9HRJ1 as seed ortholog is 100%.
Bootstrap support for H3AR85 as seed ortholog is 100%.

Group of orthologs #150. Best score 151 bits
Score difference with first non-orthologous sequence - H.salinarum:151 L.chalumnae:151

Q9HN24              	100.00%		H3A782              	100.00%
                    	       		H3BBM8              	15.70%
Bootstrap support for Q9HN24 as seed ortholog is 100%.
Bootstrap support for H3A782 as seed ortholog is 100%.

Group of orthologs #151. Best score 151 bits
Score difference with first non-orthologous sequence - H.salinarum:151 L.chalumnae:151

Q9HRL8              	100.00%		O03847              	100.00%
Bootstrap support for Q9HRL8 as seed ortholog is 100%.
Bootstrap support for O03847 as seed ortholog is 100%.

Group of orthologs #152. Best score 150 bits
Score difference with first non-orthologous sequence - H.salinarum:150 L.chalumnae:150

Q9HSL2              	100.00%		H2ZXM1              	100.00%
Bootstrap support for Q9HSL2 as seed ortholog is 100%.
Bootstrap support for H2ZXM1 as seed ortholog is 100%.

Group of orthologs #153. Best score 150 bits
Score difference with first non-orthologous sequence - H.salinarum:150 L.chalumnae:150

Q9HPR4              	100.00%		H3B9L1              	100.00%
Bootstrap support for Q9HPR4 as seed ortholog is 100%.
Bootstrap support for H3B9L1 as seed ortholog is 100%.

Group of orthologs #154. Best score 149 bits
Score difference with first non-orthologous sequence - H.salinarum:149 L.chalumnae:73

P57705              	100.00%		H3AIV7              	100.00%
Bootstrap support for P57705 as seed ortholog is 100%.
Bootstrap support for H3AIV7 as seed ortholog is 92%.

Group of orthologs #155. Best score 149 bits
Score difference with first non-orthologous sequence - H.salinarum:149 L.chalumnae:53

Q9HS19              	100.00%		H3AQH4              	100.00%
Bootstrap support for Q9HS19 as seed ortholog is 100%.
Bootstrap support for H3AQH4 as seed ortholog is 95%.

Group of orthologs #156. Best score 148 bits
Score difference with first non-orthologous sequence - H.salinarum:148 L.chalumnae:148

Q9HQD1              	100.00%		H3AYK6              	100.00%
Bootstrap support for Q9HQD1 as seed ortholog is 100%.
Bootstrap support for H3AYK6 as seed ortholog is 100%.

Group of orthologs #157. Best score 148 bits
Score difference with first non-orthologous sequence - H.salinarum:148 L.chalumnae:39

Q9HNW6              	100.00%		H3BF67              	100.00%
Bootstrap support for Q9HNW6 as seed ortholog is 100%.
Bootstrap support for H3BF67 as seed ortholog is 87%.

Group of orthologs #158. Best score 147 bits
Score difference with first non-orthologous sequence - H.salinarum:147 L.chalumnae:147

Q9HP68              	100.00%		H3A886              	100.00%
Bootstrap support for Q9HP68 as seed ortholog is 100%.
Bootstrap support for H3A886 as seed ortholog is 100%.

Group of orthologs #159. Best score 147 bits
Score difference with first non-orthologous sequence - H.salinarum:48 L.chalumnae:6

Q9HQ41              	100.00%		H3BEC6              	100.00%
Bootstrap support for Q9HQ41 as seed ortholog is 94%.
Bootstrap support for H3BEC6 as seed ortholog is 60%.
Alternative seed ortholog is H3B355 (6 bits away from this cluster)

Group of orthologs #160. Best score 146 bits
Score difference with first non-orthologous sequence - H.salinarum:95 L.chalumnae:146

Q9HN74              	100.00%		H3BAF3              	100.00%
                    	       		H3B6J5              	37.15%
                    	       		H3AEP4              	5.34%
Bootstrap support for Q9HN74 as seed ortholog is 98%.
Bootstrap support for H3BAF3 as seed ortholog is 100%.

Group of orthologs #161. Best score 144 bits
Score difference with first non-orthologous sequence - H.salinarum:144 L.chalumnae:50

Q9HS54              	100.00%		H3AIE9              	100.00%
                    	       		H3BHM8              	8.50%
Bootstrap support for Q9HS54 as seed ortholog is 100%.
Bootstrap support for H3AIE9 as seed ortholog is 87%.

Group of orthologs #162. Best score 144 bits
Score difference with first non-orthologous sequence - H.salinarum:144 L.chalumnae:144

Q9HRI1              	100.00%		H3AR60              	100.00%
                    	       		H3AP34              	77.83%
Bootstrap support for Q9HRI1 as seed ortholog is 100%.
Bootstrap support for H3AR60 as seed ortholog is 100%.

Group of orthologs #163. Best score 144 bits
Score difference with first non-orthologous sequence - H.salinarum:144 L.chalumnae:144

P0CX07              	100.00%		H2ZYP6              	100.00%
Bootstrap support for P0CX07 as seed ortholog is 100%.
Bootstrap support for H2ZYP6 as seed ortholog is 100%.

Group of orthologs #164. Best score 144 bits
Score difference with first non-orthologous sequence - H.salinarum:144 L.chalumnae:144

Q9HMG5              	100.00%		H3AZU8              	100.00%
Bootstrap support for Q9HMG5 as seed ortholog is 100%.
Bootstrap support for H3AZU8 as seed ortholog is 100%.

Group of orthologs #165. Best score 144 bits
Score difference with first non-orthologous sequence - H.salinarum:144 L.chalumnae:82

Q9HRE8              	100.00%		H3B0V1              	100.00%
Bootstrap support for Q9HRE8 as seed ortholog is 100%.
Bootstrap support for H3B0V1 as seed ortholog is 99%.

Group of orthologs #166. Best score 143 bits
Score difference with first non-orthologous sequence - H.salinarum:143 L.chalumnae:94

Q9HPZ3              	100.00%		H3B2E8              	100.00%
Bootstrap support for Q9HPZ3 as seed ortholog is 100%.
Bootstrap support for H3B2E8 as seed ortholog is 99%.

Group of orthologs #167. Best score 143 bits
Score difference with first non-orthologous sequence - H.salinarum:143 L.chalumnae:143

Q9HNJ8              	100.00%		H3BGA5              	100.00%
Bootstrap support for Q9HNJ8 as seed ortholog is 100%.
Bootstrap support for H3BGA5 as seed ortholog is 100%.

Group of orthologs #168. Best score 142 bits
Score difference with first non-orthologous sequence - H.salinarum:142 L.chalumnae:31

Q9HPA7              	100.00%		H3A640              	100.00%
                    	       		H2ZV67              	45.25%
Bootstrap support for Q9HPA7 as seed ortholog is 100%.
Bootstrap support for H3A640 as seed ortholog is 85%.

Group of orthologs #169. Best score 141 bits
Score difference with first non-orthologous sequence - H.salinarum:141 L.chalumnae:141

Q9HHU7              	100.00%		H3B3Y7              	100.00%
                    	       		H3AGX9              	53.27%
                    	       		H3A5L8              	46.37%
                    	       		H3BCV5              	44.57%
                    	       		H3B2L2              	31.30%
                    	       		H3B9P4              	28.97%
Bootstrap support for Q9HHU7 as seed ortholog is 100%.
Bootstrap support for H3B3Y7 as seed ortholog is 100%.

Group of orthologs #170. Best score 141 bits
Score difference with first non-orthologous sequence - H.salinarum:141 L.chalumnae:141

Q9HPJ0              	100.00%		H3ADS0              	100.00%
Bootstrap support for Q9HPJ0 as seed ortholog is 100%.
Bootstrap support for H3ADS0 as seed ortholog is 100%.

Group of orthologs #171. Best score 140 bits
Score difference with first non-orthologous sequence - H.salinarum:140 L.chalumnae:140

Q9HMU4              	100.00%		H3AT42              	100.00%
                    	       		H3AWZ8              	70.51%
Bootstrap support for Q9HMU4 as seed ortholog is 100%.
Bootstrap support for H3AT42 as seed ortholog is 100%.

Group of orthologs #172. Best score 139 bits
Score difference with first non-orthologous sequence - H.salinarum:45 L.chalumnae:60

Q9HSZ9              	100.00%		H3A703              	100.00%
Q9HSZ8              	10.25%		H3AGB5              	12.37%
Bootstrap support for Q9HSZ9 as seed ortholog is 86%.
Bootstrap support for H3A703 as seed ortholog is 95%.

Group of orthologs #173. Best score 138 bits
Score difference with first non-orthologous sequence - H.salinarum:76 L.chalumnae:52

Q9HPH9              	100.00%		H3ALI2              	100.00%
Q9HQU7              	100.00%		H3AMB4              	100.00%
Bootstrap support for Q9HPH9 as seed ortholog is 99%.
Bootstrap support for Q9HQU7 as seed ortholog is 98%.
Bootstrap support for H3ALI2 as seed ortholog is 94%.
Bootstrap support for H3AMB4 as seed ortholog is 90%.

Group of orthologs #174. Best score 138 bits
Score difference with first non-orthologous sequence - H.salinarum:138 L.chalumnae:138

Q9HPJ7              	100.00%		H3B6A3              	100.00%
Bootstrap support for Q9HPJ7 as seed ortholog is 100%.
Bootstrap support for H3B6A3 as seed ortholog is 100%.

Group of orthologs #175. Best score 138 bits
Score difference with first non-orthologous sequence - H.salinarum:138 L.chalumnae:41

Q9HMH9              	100.00%		M3XKJ9              	100.00%
Bootstrap support for Q9HMH9 as seed ortholog is 100%.
Bootstrap support for M3XKJ9 as seed ortholog is 81%.

Group of orthologs #176. Best score 137 bits
Score difference with first non-orthologous sequence - H.salinarum:137 L.chalumnae:137

Q9HPD3              	100.00%		H3ABN2              	100.00%
Bootstrap support for Q9HPD3 as seed ortholog is 100%.
Bootstrap support for H3ABN2 as seed ortholog is 100%.

Group of orthologs #177. Best score 136 bits
Score difference with first non-orthologous sequence - H.salinarum:136 L.chalumnae:70

Q9HQJ5              	100.00%		H3B8Y2              	100.00%
                    	       		H3A5G2              	41.36%
Bootstrap support for Q9HQJ5 as seed ortholog is 100%.
Bootstrap support for H3B8Y2 as seed ortholog is 99%.

Group of orthologs #178. Best score 136 bits
Score difference with first non-orthologous sequence - H.salinarum:136 L.chalumnae:136

P15010              	100.00%		H3AMK4              	100.00%
Bootstrap support for P15010 as seed ortholog is 100%.
Bootstrap support for H3AMK4 as seed ortholog is 100%.

Group of orthologs #179. Best score 134 bits
Score difference with first non-orthologous sequence - H.salinarum:134 L.chalumnae:134

Q9HMC9              	100.00%		H3ALB7              	100.00%
                    	       		H3BHG9              	38.11%
                    	       		H2ZWF5              	29.32%
                    	       		H3AN66              	23.87%
                    	       		H3ATI3              	18.04%
Bootstrap support for Q9HMC9 as seed ortholog is 100%.
Bootstrap support for H3ALB7 as seed ortholog is 100%.

Group of orthologs #180. Best score 134 bits
Score difference with first non-orthologous sequence - H.salinarum:134 L.chalumnae:134

P57713              	100.00%		H3A155              	100.00%
Bootstrap support for P57713 as seed ortholog is 100%.
Bootstrap support for H3A155 as seed ortholog is 100%.

Group of orthologs #181. Best score 134 bits
Score difference with first non-orthologous sequence - H.salinarum:134 L.chalumnae:7

Q9HPQ4              	100.00%		H3ABB7              	100.00%
Bootstrap support for Q9HPQ4 as seed ortholog is 100%.
Bootstrap support for H3ABB7 as seed ortholog is 53%.
Alternative seed ortholog is H3B6I7 (7 bits away from this cluster)

Group of orthologs #182. Best score 131 bits
Score difference with first non-orthologous sequence - H.salinarum:131 L.chalumnae:131

Q9HQK6              	100.00%		H3ABL2              	100.00%
Bootstrap support for Q9HQK6 as seed ortholog is 100%.
Bootstrap support for H3ABL2 as seed ortholog is 100%.

Group of orthologs #183. Best score 130 bits
Score difference with first non-orthologous sequence - H.salinarum:130 L.chalumnae:130

Q9HMM6              	100.00%		H3BHP5              	100.00%
                    	       		H3AP60              	6.93%
Bootstrap support for Q9HMM6 as seed ortholog is 100%.
Bootstrap support for H3BHP5 as seed ortholog is 100%.

Group of orthologs #184. Best score 129 bits
Score difference with first non-orthologous sequence - H.salinarum:129 L.chalumnae:129

Q9HMW5              	100.00%		H2ZSU0              	100.00%
                    	       		H3ATM4              	14.34%
                    	       		H3ASV4              	9.60%
Bootstrap support for Q9HMW5 as seed ortholog is 100%.
Bootstrap support for H2ZSU0 as seed ortholog is 100%.

Group of orthologs #185. Best score 128 bits
Score difference with first non-orthologous sequence - H.salinarum:128 L.chalumnae:128

Q9HNI2              	100.00%		H3A2C0              	100.00%
Bootstrap support for Q9HNI2 as seed ortholog is 100%.
Bootstrap support for H3A2C0 as seed ortholog is 100%.

Group of orthologs #186. Best score 128 bits
Score difference with first non-orthologous sequence - H.salinarum:86 L.chalumnae:26

Q9HP38              	100.00%		H3AZV5              	100.00%
Bootstrap support for Q9HP38 as seed ortholog is 97%.
Bootstrap support for H3AZV5 as seed ortholog is 76%.

Group of orthologs #187. Best score 127 bits
Score difference with first non-orthologous sequence - H.salinarum:127 L.chalumnae:19

Q9HSA8              	100.00%		H3ALK7              	100.00%
                    	       		M3XL51              	57.31%
                    	       		H3AD17              	35.50%
                    	       		M3XLD2              	19.49%
Bootstrap support for Q9HSA8 as seed ortholog is 100%.
Bootstrap support for H3ALK7 as seed ortholog is 74%.
Alternative seed ortholog is H3ANH2 (19 bits away from this cluster)

Group of orthologs #188. Best score 127 bits
Score difference with first non-orthologous sequence - H.salinarum:127 L.chalumnae:127

O24787              	100.00%		H3A5R1              	100.00%
                    	       		H3ADD1              	96.75%
Bootstrap support for O24787 as seed ortholog is 100%.
Bootstrap support for H3A5R1 as seed ortholog is 100%.

Group of orthologs #189. Best score 125 bits
Score difference with first non-orthologous sequence - H.salinarum:125 L.chalumnae:68

P13553              	100.00%		H3BGD3              	100.00%
Bootstrap support for P13553 as seed ortholog is 100%.
Bootstrap support for H3BGD3 as seed ortholog is 99%.

Group of orthologs #190. Best score 124 bits
Score difference with first non-orthologous sequence - H.salinarum:124 L.chalumnae:124

Q9HSS1              	100.00%		H3BDK4              	100.00%
                    	       		H3B0J0              	80.31%
Bootstrap support for Q9HSS1 as seed ortholog is 100%.
Bootstrap support for H3BDK4 as seed ortholog is 100%.

Group of orthologs #191. Best score 124 bits
Score difference with first non-orthologous sequence - H.salinarum:124 L.chalumnae:124

Q9HHP2              	100.00%		H3A776              	100.00%
Bootstrap support for Q9HHP2 as seed ortholog is 100%.
Bootstrap support for H3A776 as seed ortholog is 100%.

Group of orthologs #192. Best score 124 bits
Score difference with first non-orthologous sequence - H.salinarum:124 L.chalumnae:67

Q9HRJ8              	100.00%		H3BEJ6              	100.00%
Bootstrap support for Q9HRJ8 as seed ortholog is 100%.
Bootstrap support for H3BEJ6 as seed ortholog is 98%.

Group of orthologs #193. Best score 123 bits
Score difference with first non-orthologous sequence - H.salinarum:123 L.chalumnae:123

Q9HMR6              	100.00%		H3ACH9              	100.00%
Bootstrap support for Q9HMR6 as seed ortholog is 100%.
Bootstrap support for H3ACH9 as seed ortholog is 100%.

Group of orthologs #194. Best score 123 bits
Score difference with first non-orthologous sequence - H.salinarum:123 L.chalumnae:123

Q9HR11              	100.00%		M3XK96              	100.00%
Bootstrap support for Q9HR11 as seed ortholog is 100%.
Bootstrap support for M3XK96 as seed ortholog is 100%.

Group of orthologs #195. Best score 121 bits
Score difference with first non-orthologous sequence - H.salinarum:121 L.chalumnae:46

Q9HRF8              	100.00%		H3BA10              	100.00%
Q9HR34              	6.94%		H3AI08              	34.17%
                    	       		H3AG72              	28.76%
Bootstrap support for Q9HRF8 as seed ortholog is 100%.
Bootstrap support for H3BA10 as seed ortholog is 91%.

Group of orthologs #196. Best score 121 bits
Score difference with first non-orthologous sequence - H.salinarum:121 L.chalumnae:121

Q9HQ27              	100.00%		H2ZWI0              	100.00%
                    	       		H3AI16              	27.33%
Bootstrap support for Q9HQ27 as seed ortholog is 100%.
Bootstrap support for H2ZWI0 as seed ortholog is 100%.

Group of orthologs #197. Best score 119 bits
Score difference with first non-orthologous sequence - H.salinarum:119 L.chalumnae:119

Q9HQG0              	100.00%		H2ZWM6              	100.00%
                    	       		H3A9U3              	10.95%
Bootstrap support for Q9HQG0 as seed ortholog is 100%.
Bootstrap support for H2ZWM6 as seed ortholog is 100%.

Group of orthologs #198. Best score 119 bits
Score difference with first non-orthologous sequence - H.salinarum:119 L.chalumnae:119

Q9HSA2              	100.00%		H3ACS3              	100.00%
Bootstrap support for Q9HSA2 as seed ortholog is 100%.
Bootstrap support for H3ACS3 as seed ortholog is 100%.

Group of orthologs #199. Best score 118 bits
Score difference with first non-orthologous sequence - H.salinarum:118 L.chalumnae:118

Q9HPN8              	100.00%		H3AH77              	100.00%
                    	       		M3XJQ9              	78.68%
                    	       		H3B2M5              	75.88%
                    	       		H3AJC6              	10.66%
                    	       		H3AE58              	6.03%
                    	       		H3B1N9              	5.89%
                    	       		H3AZP4              	5.40%
                    	       		H3AN19              	5.26%
Bootstrap support for Q9HPN8 as seed ortholog is 100%.
Bootstrap support for H3AH77 as seed ortholog is 100%.

Group of orthologs #200. Best score 118 bits
Score difference with first non-orthologous sequence - H.salinarum:118 L.chalumnae:118

Q9HMP9              	100.00%		H3AB98              	100.00%
Q9HQ08              	7.06%		H3A3B4              	7.70%
Bootstrap support for Q9HMP9 as seed ortholog is 100%.
Bootstrap support for H3AB98 as seed ortholog is 100%.

Group of orthologs #201. Best score 118 bits
Score difference with first non-orthologous sequence - H.salinarum:31 L.chalumnae:44

Q9HN44              	100.00%		H3AAT0              	100.00%
                    	       		H3BIE5              	25.53%
Bootstrap support for Q9HN44 as seed ortholog is 82%.
Bootstrap support for H3AAT0 as seed ortholog is 91%.

Group of orthologs #202. Best score 118 bits
Score difference with first non-orthologous sequence - H.salinarum:118 L.chalumnae:118

Q9HNJ6              	100.00%		H3AJA8              	100.00%
Bootstrap support for Q9HNJ6 as seed ortholog is 100%.
Bootstrap support for H3AJA8 as seed ortholog is 100%.

Group of orthologs #203. Best score 117 bits
Score difference with first non-orthologous sequence - H.salinarum:73 L.chalumnae:21

Q9HS80              	100.00%		H3B1X8              	100.00%
                    	       		H3A3Y3              	48.02%
                    	       		H3B8R5              	42.86%
Bootstrap support for Q9HS80 as seed ortholog is 99%.
Bootstrap support for H3B1X8 as seed ortholog is 75%.

Group of orthologs #204. Best score 117 bits
Score difference with first non-orthologous sequence - H.salinarum:117 L.chalumnae:117

Q9HR49              	100.00%		H3AIW6              	100.00%
Bootstrap support for Q9HR49 as seed ortholog is 100%.
Bootstrap support for H3AIW6 as seed ortholog is 100%.

Group of orthologs #205. Best score 117 bits
Score difference with first non-orthologous sequence - H.salinarum:117 L.chalumnae:53

Q9HQJ2              	100.00%		H3B6Y8              	100.00%
Bootstrap support for Q9HQJ2 as seed ortholog is 100%.
Bootstrap support for H3B6Y8 as seed ortholog is 98%.

Group of orthologs #206. Best score 116 bits
Score difference with first non-orthologous sequence - H.salinarum:116 L.chalumnae:20

O52003              	100.00%		H3AJK7              	100.00%
                    	       		H3AEE1              	10.94%
                    	       		H3BAQ9              	10.77%
                    	       		H3ABN5              	8.95%
                    	       		H3BD82              	5.13%
Bootstrap support for O52003 as seed ortholog is 100%.
Bootstrap support for H3AJK7 as seed ortholog is 68%.
Alternative seed ortholog is H2ZZX2 (20 bits away from this cluster)

Group of orthologs #207. Best score 116 bits
Score difference with first non-orthologous sequence - H.salinarum:116 L.chalumnae:116

Q9HPW9              	100.00%		H2ZYQ2              	100.00%
                    	       		H2ZZ92              	62.64%
                    	       		H3AH67              	8.42%
Bootstrap support for Q9HPW9 as seed ortholog is 100%.
Bootstrap support for H2ZYQ2 as seed ortholog is 100%.

Group of orthologs #208. Best score 116 bits
Score difference with first non-orthologous sequence - H.salinarum:116 L.chalumnae:2

Q9HN40              	100.00%		H3ANP9              	100.00%
Bootstrap support for Q9HN40 as seed ortholog is 100%.
Bootstrap support for H3ANP9 as seed ortholog is 44%.
Alternative seed ortholog is H3BAB5 (2 bits away from this cluster)

Group of orthologs #209. Best score 116 bits
Score difference with first non-orthologous sequence - H.salinarum:116 L.chalumnae:116

Q9HRK1              	100.00%		O03170              	100.00%
Bootstrap support for Q9HRK1 as seed ortholog is 100%.
Bootstrap support for O03170 as seed ortholog is 100%.

Group of orthologs #210. Best score 115 bits
Score difference with first non-orthologous sequence - H.salinarum:115 L.chalumnae:69

Q9HNZ8              	100.00%		H2ZWD9              	100.00%
                    	       		H2ZXE5              	5.62%
Bootstrap support for Q9HNZ8 as seed ortholog is 100%.
Bootstrap support for H2ZWD9 as seed ortholog is 94%.

Group of orthologs #211. Best score 114 bits
Score difference with first non-orthologous sequence - H.salinarum:114 L.chalumnae:114

Q9HRD0              	100.00%		H3ARM7              	100.00%
O54523              	100.00%		H3ASB6              	100.00%
Q9HN03              	47.63%		
Q9HHS6              	32.12%		
Q9HHW5              	16.17%		
Bootstrap support for Q9HRD0 as seed ortholog is 100%.
Bootstrap support for O54523 as seed ortholog is 100%.
Bootstrap support for H3ARM7 as seed ortholog is 100%.
Bootstrap support for H3ASB6 as seed ortholog is 100%.

Group of orthologs #212. Best score 114 bits
Score difference with first non-orthologous sequence - H.salinarum:114 L.chalumnae:114

Q9HMR2              	100.00%		H3A2W5              	100.00%
Bootstrap support for Q9HMR2 as seed ortholog is 100%.
Bootstrap support for H3A2W5 as seed ortholog is 100%.

Group of orthologs #213. Best score 114 bits
Score difference with first non-orthologous sequence - H.salinarum:114 L.chalumnae:114

P50558              	100.00%		H3AQL2              	100.00%
Bootstrap support for P50558 as seed ortholog is 100%.
Bootstrap support for H3AQL2 as seed ortholog is 100%.

Group of orthologs #214. Best score 112 bits
Score difference with first non-orthologous sequence - H.salinarum:112 L.chalumnae:112

Q9HSL5              	100.00%		H3A009              	100.00%
Q9HQB3              	15.50%		H3A9F1              	64.85%
                    	       		H3A827              	59.09%
                    	       		H3A981              	38.52%
                    	       		H3ATR4              	37.98%
                    	       		H3ALS9              	36.56%
                    	       		H3B3X6              	34.60%
                    	       		H2ZXM3              	33.08%
                    	       		H3AUZ7              	28.29%
                    	       		H3AEZ9              	25.24%
                    	       		H3AHW9              	25.14%
                    	       		H3APS3              	24.92%
                    	       		H3A3I2              	13.60%
Bootstrap support for Q9HSL5 as seed ortholog is 100%.
Bootstrap support for H3A009 as seed ortholog is 100%.

Group of orthologs #215. Best score 112 bits
Score difference with first non-orthologous sequence - H.salinarum:112 L.chalumnae:112

Q9HN56              	100.00%		H3A7Z4              	100.00%
Q9HHE9              	56.92%		H3BIE1              	58.33%
Q48325              	56.52%		
O52018              	49.80%		
O52004              	10.28%		
Bootstrap support for Q9HN56 as seed ortholog is 100%.
Bootstrap support for H3A7Z4 as seed ortholog is 100%.

Group of orthologs #216. Best score 112 bits
Score difference with first non-orthologous sequence - H.salinarum:23 L.chalumnae:8

Q9HSR4              	100.00%		H3B6E9              	100.00%
Q9HRV8              	7.93%		
Bootstrap support for Q9HSR4 as seed ortholog is 18%.
Alternative seed ortholog is Q9HNC5 (23 bits away from this cluster)
Bootstrap support for H3B6E9 as seed ortholog is 62%.
Alternative seed ortholog is H3APP7 (8 bits away from this cluster)

Group of orthologs #217. Best score 112 bits
Score difference with first non-orthologous sequence - H.salinarum:112 L.chalumnae:112

P15009              	100.00%		H3AB87              	100.00%
Bootstrap support for P15009 as seed ortholog is 100%.
Bootstrap support for H3AB87 as seed ortholog is 100%.

Group of orthologs #218. Best score 111 bits
Score difference with first non-orthologous sequence - H.salinarum:111 L.chalumnae:111

Q9HR21              	100.00%		H3B762              	100.00%
                    	       		H3B2S8              	56.87%
                    	       		M3XJ68              	39.82%
                    	       		M3XIT3              	22.19%
                    	       		H3B9L4              	19.21%
                    	       		H2ZXU9              	18.48%
                    	       		H3A114              	16.02%
                    	       		H2ZZE6              	15.80%
                    	       		H2ZW74              	10.65%
                    	       		H3AES0              	8.89%
                    	       		H3AIJ4              	7.02%
Bootstrap support for Q9HR21 as seed ortholog is 100%.
Bootstrap support for H3B762 as seed ortholog is 100%.

Group of orthologs #219. Best score 109 bits
Score difference with first non-orthologous sequence - H.salinarum:109 L.chalumnae:109

Q9HSH6              	100.00%		H3AR11              	100.00%
                    	       		H3AP08              	51.28%
                    	       		H2ZZW4              	50.92%
Bootstrap support for Q9HSH6 as seed ortholog is 100%.
Bootstrap support for H3AR11 as seed ortholog is 100%.

Group of orthologs #220. Best score 109 bits
Score difference with first non-orthologous sequence - H.salinarum:109 L.chalumnae:109

Q9HHP0              	100.00%		H3A493              	100.00%
                    	       		H3BCC3              	23.54%
Bootstrap support for Q9HHP0 as seed ortholog is 100%.
Bootstrap support for H3A493 as seed ortholog is 100%.

Group of orthologs #221. Best score 109 bits
Score difference with first non-orthologous sequence - H.salinarum:109 L.chalumnae:109

Q9HPQ9              	100.00%		H3B914              	100.00%
Bootstrap support for Q9HPQ9 as seed ortholog is 100%.
Bootstrap support for H3B914 as seed ortholog is 100%.

Group of orthologs #222. Best score 107 bits
Score difference with first non-orthologous sequence - H.salinarum:107 L.chalumnae:107

Q9HQE0              	100.00%		H3ATH0              	100.00%
Q9HN51              	24.14%		
Bootstrap support for Q9HQE0 as seed ortholog is 100%.
Bootstrap support for H3ATH0 as seed ortholog is 100%.

Group of orthologs #223. Best score 107 bits
Score difference with first non-orthologous sequence - H.salinarum:107 L.chalumnae:107

Q9HNS4              	100.00%		H3ASK0              	100.00%
Bootstrap support for Q9HNS4 as seed ortholog is 100%.
Bootstrap support for H3ASK0 as seed ortholog is 100%.

Group of orthologs #224. Best score 107 bits
Score difference with first non-orthologous sequence - H.salinarum:107 L.chalumnae:107

Q9HMY5              	100.00%		H3BDW3              	100.00%
Bootstrap support for Q9HMY5 as seed ortholog is 100%.
Bootstrap support for H3BDW3 as seed ortholog is 100%.

Group of orthologs #225. Best score 106 bits
Score difference with first non-orthologous sequence - H.salinarum:106 L.chalumnae:13

Q9HP11              	100.00%		H3ADK8              	100.00%
Q9HPV9              	6.86%		
Bootstrap support for Q9HP11 as seed ortholog is 100%.
Bootstrap support for H3ADK8 as seed ortholog is 67%.
Alternative seed ortholog is H3BBU9 (13 bits away from this cluster)

Group of orthologs #226. Best score 106 bits
Score difference with first non-orthologous sequence - H.salinarum:45 L.chalumnae:106

Q9HMT7              	100.00%		H3A7F4              	100.00%
Bootstrap support for Q9HMT7 as seed ortholog is 87%.
Bootstrap support for H3A7F4 as seed ortholog is 100%.

Group of orthologs #227. Best score 106 bits
Score difference with first non-orthologous sequence - H.salinarum:106 L.chalumnae:41

Q9HQI3              	100.00%		H3AEH1              	100.00%
Bootstrap support for Q9HQI3 as seed ortholog is 100%.
Bootstrap support for H3AEH1 as seed ortholog is 89%.

Group of orthologs #228. Best score 105 bits
Score difference with first non-orthologous sequence - H.salinarum:105 L.chalumnae:18

Q9HP03              	100.00%		H3A050              	100.00%
Bootstrap support for Q9HP03 as seed ortholog is 100%.
Bootstrap support for H3A050 as seed ortholog is 69%.
Alternative seed ortholog is H3A7U5 (18 bits away from this cluster)

Group of orthologs #229. Best score 105 bits
Score difference with first non-orthologous sequence - H.salinarum:105 L.chalumnae:105

Q9HR32              	100.00%		M3XKK5              	100.00%
Bootstrap support for Q9HR32 as seed ortholog is 100%.
Bootstrap support for M3XKK5 as seed ortholog is 100%.

Group of orthologs #230. Best score 104 bits
Score difference with first non-orthologous sequence - H.salinarum:44 L.chalumnae:104

Q9HRQ5              	100.00%		H2ZV22              	100.00%
Bootstrap support for Q9HRQ5 as seed ortholog is 96%.
Bootstrap support for H2ZV22 as seed ortholog is 100%.

Group of orthologs #231. Best score 103 bits
Score difference with first non-orthologous sequence - H.salinarum:103 L.chalumnae:103

Q9HND8              	100.00%		H3ALP2              	100.00%
                    	       		H3B8J9              	47.84%
                    	       		H3BBB9              	46.08%
                    	       		H2ZRR1              	21.76%
Bootstrap support for Q9HND8 as seed ortholog is 100%.
Bootstrap support for H3ALP2 as seed ortholog is 100%.

Group of orthologs #232. Best score 103 bits
Score difference with first non-orthologous sequence - H.salinarum:103 L.chalumnae:34

P61414              	100.00%		H3APT4              	100.00%
Bootstrap support for P61414 as seed ortholog is 100%.
Bootstrap support for H3APT4 as seed ortholog is 93%.

Group of orthologs #233. Best score 103 bits
Score difference with first non-orthologous sequence - H.salinarum:2 L.chalumnae:103

Q9HQD7              	100.00%		H3BG15              	100.00%
Bootstrap support for Q9HQD7 as seed ortholog is 50%.
Alternative seed ortholog is Q9HP79 (2 bits away from this cluster)
Bootstrap support for H3BG15 as seed ortholog is 100%.

Group of orthologs #234. Best score 102 bits
Score difference with first non-orthologous sequence - H.salinarum:44 L.chalumnae:102

Q9HMB6              	100.00%		H2ZYY0              	100.00%
Bootstrap support for Q9HMB6 as seed ortholog is 91%.
Bootstrap support for H2ZYY0 as seed ortholog is 100%.

Group of orthologs #235. Best score 102 bits
Score difference with first non-orthologous sequence - H.salinarum:102 L.chalumnae:102

Q9HPJ8              	100.00%		H3A9L9              	100.00%
Bootstrap support for Q9HPJ8 as seed ortholog is 100%.
Bootstrap support for H3A9L9 as seed ortholog is 100%.

Group of orthologs #236. Best score 102 bits
Score difference with first non-orthologous sequence - H.salinarum:102 L.chalumnae:102

Q9HSA3              	100.00%		H3AW53              	100.00%
Bootstrap support for Q9HSA3 as seed ortholog is 100%.
Bootstrap support for H3AW53 as seed ortholog is 100%.

Group of orthologs #237. Best score 101 bits
Score difference with first non-orthologous sequence - H.salinarum:101 L.chalumnae:101

Q9HMJ2              	100.00%		H2ZWB9              	100.00%
Bootstrap support for Q9HMJ2 as seed ortholog is 100%.
Bootstrap support for H2ZWB9 as seed ortholog is 100%.

Group of orthologs #238. Best score 101 bits
Score difference with first non-orthologous sequence - H.salinarum:101 L.chalumnae:101

Q9HNH7              	100.00%		H3AW97              	100.00%
Bootstrap support for Q9HNH7 as seed ortholog is 100%.
Bootstrap support for H3AW97 as seed ortholog is 100%.

Group of orthologs #239. Best score 100 bits
Score difference with first non-orthologous sequence - H.salinarum:100 L.chalumnae:23

Q9HR16              	100.00%		H3B2N3              	100.00%
                    	       		H3BGT1              	43.37%
                    	       		H3B3W7              	38.65%
                    	       		H3AVC3              	25.12%
                    	       		H3A688              	23.08%
Bootstrap support for Q9HR16 as seed ortholog is 100%.
Bootstrap support for H3B2N3 as seed ortholog is 74%.
Alternative seed ortholog is H2ZXY1 (23 bits away from this cluster)

Group of orthologs #240. Best score 99 bits
Score difference with first non-orthologous sequence - H.salinarum:99 L.chalumnae:99

Q9HRL1              	100.00%		O03166              	100.00%
Q9HRS8              	10.65%		
Q9HRS9              	5.03%		
Bootstrap support for Q9HRL1 as seed ortholog is 100%.
Bootstrap support for O03166 as seed ortholog is 100%.

Group of orthologs #241. Best score 99 bits
Score difference with first non-orthologous sequence - H.salinarum:99 L.chalumnae:99

O51976              	100.00%		H3B8N7              	100.00%
Q9HRI0              	12.22%		
Bootstrap support for O51976 as seed ortholog is 100%.
Bootstrap support for H3B8N7 as seed ortholog is 100%.

Group of orthologs #242. Best score 99 bits
Score difference with first non-orthologous sequence - H.salinarum:99 L.chalumnae:11

Q9HQH1              	100.00%		H2ZYS5              	100.00%
Bootstrap support for Q9HQH1 as seed ortholog is 100%.
Bootstrap support for H2ZYS5 as seed ortholog is 59%.
Alternative seed ortholog is H3AXD8 (11 bits away from this cluster)

Group of orthologs #243. Best score 98 bits
Score difference with first non-orthologous sequence - H.salinarum:98 L.chalumnae:98

Q9HR41              	100.00%		H3BG56              	100.00%
                    	       		H3BBZ4              	10.16%
                    	       		H3BBI6              	10.16%
Bootstrap support for Q9HR41 as seed ortholog is 100%.
Bootstrap support for H3BG56 as seed ortholog is 100%.

Group of orthologs #244. Best score 98 bits
Score difference with first non-orthologous sequence - H.salinarum:98 L.chalumnae:98

Q9HNP5              	100.00%		H2ZWW5              	100.00%
                    	       		H3A060              	17.56%
Bootstrap support for Q9HNP5 as seed ortholog is 100%.
Bootstrap support for H2ZWW5 as seed ortholog is 100%.

Group of orthologs #245. Best score 98 bits
Score difference with first non-orthologous sequence - H.salinarum:98 L.chalumnae:98

Q9HPB8              	100.00%		H3AAX8              	100.00%
Bootstrap support for Q9HPB8 as seed ortholog is 100%.
Bootstrap support for H3AAX8 as seed ortholog is 100%.

Group of orthologs #246. Best score 98 bits
Score difference with first non-orthologous sequence - H.salinarum:98 L.chalumnae:98

Q9HRL7              	100.00%		H3B1T9              	100.00%
Bootstrap support for Q9HRL7 as seed ortholog is 100%.
Bootstrap support for H3B1T9 as seed ortholog is 100%.

Group of orthologs #247. Best score 97 bits
Score difference with first non-orthologous sequence - H.salinarum:97 L.chalumnae:97

Q9HMK5              	100.00%		H3AP22              	100.00%
Q9HPP4              	54.82%		H3ALC0              	74.81%
Q9HSK2              	7.46%		H3BG19              	55.63%
Bootstrap support for Q9HMK5 as seed ortholog is 100%.
Bootstrap support for H3AP22 as seed ortholog is 100%.

Group of orthologs #248. Best score 97 bits
Score difference with first non-orthologous sequence - H.salinarum:97 L.chalumnae:97

P15008              	100.00%		H3AK52              	100.00%
Bootstrap support for P15008 as seed ortholog is 100%.
Bootstrap support for H3AK52 as seed ortholog is 100%.

Group of orthologs #249. Best score 97 bits
Score difference with first non-orthologous sequence - H.salinarum:97 L.chalumnae:97

Q9HNB3              	100.00%		H3AJ60              	100.00%
Bootstrap support for Q9HNB3 as seed ortholog is 100%.
Bootstrap support for H3AJ60 as seed ortholog is 100%.

Group of orthologs #250. Best score 96 bits
Score difference with first non-orthologous sequence - H.salinarum:96 L.chalumnae:96

Q9HRA2              	100.00%		H3AN65              	100.00%
                    	       		H3BBR9              	67.16%
Bootstrap support for Q9HRA2 as seed ortholog is 100%.
Bootstrap support for H3AN65 as seed ortholog is 100%.

Group of orthologs #251. Best score 96 bits
Score difference with first non-orthologous sequence - H.salinarum:96 L.chalumnae:96

Q9HMC2              	100.00%		H3AXX3              	100.00%
Q9HQ88              	17.97%		
Bootstrap support for Q9HMC2 as seed ortholog is 100%.
Bootstrap support for H3AXX3 as seed ortholog is 100%.

Group of orthologs #252. Best score 95 bits
Score difference with first non-orthologous sequence - H.salinarum:95 L.chalumnae:23

Q9HN30              	100.00%		H2ZUS7              	100.00%
Q9HR19              	8.89%		H3AQY8              	68.81%
Q9HN85              	5.72%		
Bootstrap support for Q9HN30 as seed ortholog is 100%.
Bootstrap support for H2ZUS7 as seed ortholog is 65%.
Alternative seed ortholog is H2ZU38 (23 bits away from this cluster)

Group of orthologs #253. Best score 95 bits
Score difference with first non-orthologous sequence - H.salinarum:95 L.chalumnae:95

Q9HMM2              	100.00%		H3B7Z0              	100.00%
Bootstrap support for Q9HMM2 as seed ortholog is 100%.
Bootstrap support for H3B7Z0 as seed ortholog is 100%.

Group of orthologs #254. Best score 94 bits
Score difference with first non-orthologous sequence - H.salinarum:94 L.chalumnae:94

Q9HS46              	100.00%		H3A2M7              	100.00%
                    	       		H3A6J3              	64.93%
Bootstrap support for Q9HS46 as seed ortholog is 100%.
Bootstrap support for H3A2M7 as seed ortholog is 100%.

Group of orthologs #255. Best score 94 bits
Score difference with first non-orthologous sequence - H.salinarum:94 L.chalumnae:94

Q9HPB6              	100.00%		H3B3U1              	100.00%
                    	       		H3BD67              	16.38%
Bootstrap support for Q9HPB6 as seed ortholog is 100%.
Bootstrap support for H3B3U1 as seed ortholog is 100%.

Group of orthologs #256. Best score 94 bits
Score difference with first non-orthologous sequence - H.salinarum:94 L.chalumnae:94

Q9HRZ3              	100.00%		H3BGL5              	100.00%
Bootstrap support for Q9HRZ3 as seed ortholog is 100%.
Bootstrap support for H3BGL5 as seed ortholog is 100%.

Group of orthologs #257. Best score 92 bits
Score difference with first non-orthologous sequence - H.salinarum:92 L.chalumnae:92

Q9HN88              	100.00%		H3A5L2              	100.00%
                    	       		H2ZXJ6              	69.54%
                    	       		H3AQN6              	31.50%
                    	       		H3B9G7              	20.83%
Bootstrap support for Q9HN88 as seed ortholog is 100%.
Bootstrap support for H3A5L2 as seed ortholog is 100%.

Group of orthologs #258. Best score 92 bits
Score difference with first non-orthologous sequence - H.salinarum:92 L.chalumnae:92

Q9HPC2              	100.00%		H3A141              	100.00%
                    	       		H3B7R6              	29.44%
Bootstrap support for Q9HPC2 as seed ortholog is 100%.
Bootstrap support for H3A141 as seed ortholog is 100%.

Group of orthologs #259. Best score 92 bits
Score difference with first non-orthologous sequence - H.salinarum:92 L.chalumnae:92

Q9HND2              	100.00%		H3ARB5              	100.00%
Bootstrap support for Q9HND2 as seed ortholog is 100%.
Bootstrap support for H3ARB5 as seed ortholog is 100%.

Group of orthologs #260. Best score 92 bits
Score difference with first non-orthologous sequence - H.salinarum:92 L.chalumnae:92

Q9HQK5              	100.00%		H3BGJ4              	100.00%
Bootstrap support for Q9HQK5 as seed ortholog is 100%.
Bootstrap support for H3BGJ4 as seed ortholog is 100%.

Group of orthologs #261. Best score 91 bits
Score difference with first non-orthologous sequence - H.salinarum:91 L.chalumnae:91

Q9HRX2              	100.00%		H3AEX7              	100.00%
Q9HP92              	32.86%		
Bootstrap support for Q9HRX2 as seed ortholog is 100%.
Bootstrap support for H3AEX7 as seed ortholog is 100%.

Group of orthologs #262. Best score 91 bits
Score difference with first non-orthologous sequence - H.salinarum:91 L.chalumnae:91

Q9HS99              	100.00%		H3B0G2              	100.00%
Q9HHG6              	8.27%		
Bootstrap support for Q9HS99 as seed ortholog is 100%.
Bootstrap support for H3B0G2 as seed ortholog is 100%.

Group of orthologs #263. Best score 91 bits
Score difference with first non-orthologous sequence - H.salinarum:91 L.chalumnae:4

Q9HR36              	100.00%		H3BHG4              	100.00%
                    	       		H3B1F4              	60.86%
Bootstrap support for Q9HR36 as seed ortholog is 100%.
Bootstrap support for H3BHG4 as seed ortholog is 44%.
Alternative seed ortholog is H3B232 (4 bits away from this cluster)

Group of orthologs #264. Best score 91 bits
Score difference with first non-orthologous sequence - H.salinarum:91 L.chalumnae:91

O24786              	100.00%		H2ZXK8              	100.00%
Bootstrap support for O24786 as seed ortholog is 100%.
Bootstrap support for H2ZXK8 as seed ortholog is 100%.

Group of orthologs #265. Best score 89 bits
Score difference with first non-orthologous sequence - H.salinarum:89 L.chalumnae:5

Q9HSP7              	100.00%		H3ATC2              	100.00%
                    	       		H3AN71              	33.48%
                    	       		H3AZX3              	16.67%
Bootstrap support for Q9HSP7 as seed ortholog is 100%.
Bootstrap support for H3ATC2 as seed ortholog is 54%.
Alternative seed ortholog is H3AMK7 (5 bits away from this cluster)

Group of orthologs #266. Best score 89 bits
Score difference with first non-orthologous sequence - H.salinarum:89 L.chalumnae:89

Q9HQJ6              	100.00%		H3ASH8              	100.00%
Bootstrap support for Q9HQJ6 as seed ortholog is 100%.
Bootstrap support for H3ASH8 as seed ortholog is 100%.

Group of orthologs #267. Best score 89 bits
Score difference with first non-orthologous sequence - H.salinarum:89 L.chalumnae:12

Q9HMZ9              	100.00%		H3BDT0              	100.00%
Bootstrap support for Q9HMZ9 as seed ortholog is 100%.
Bootstrap support for H3BDT0 as seed ortholog is 67%.
Alternative seed ortholog is H3AR72 (12 bits away from this cluster)

Group of orthologs #268. Best score 88 bits
Score difference with first non-orthologous sequence - H.salinarum:88 L.chalumnae:88

Q9HS81              	100.00%		H3BBF6              	100.00%
Bootstrap support for Q9HS81 as seed ortholog is 100%.
Bootstrap support for H3BBF6 as seed ortholog is 100%.

Group of orthologs #269. Best score 87 bits
Score difference with first non-orthologous sequence - H.salinarum:87 L.chalumnae:87

Q9HSS4              	100.00%		H3A915              	100.00%
Bootstrap support for Q9HSS4 as seed ortholog is 100%.
Bootstrap support for H3A915 as seed ortholog is 100%.

Group of orthologs #270. Best score 86 bits
Score difference with first non-orthologous sequence - H.salinarum:86 L.chalumnae:86

P48854              	100.00%		H3A519              	100.00%
Bootstrap support for P48854 as seed ortholog is 100%.
Bootstrap support for H3A519 as seed ortholog is 100%.

Group of orthologs #271. Best score 86 bits
Score difference with first non-orthologous sequence - H.salinarum:86 L.chalumnae:86

Q9HNH4              	100.00%		H3BI66              	100.00%
Bootstrap support for Q9HNH4 as seed ortholog is 100%.
Bootstrap support for H3BI66 as seed ortholog is 100%.

Group of orthologs #272. Best score 86 bits
Score difference with first non-orthologous sequence - H.salinarum:86 L.chalumnae:86

Q9HQN6              	100.00%		M3XJE5              	100.00%
Bootstrap support for Q9HQN6 as seed ortholog is 100%.
Bootstrap support for M3XJE5 as seed ortholog is 100%.

Group of orthologs #273. Best score 85 bits
Score difference with first non-orthologous sequence - H.salinarum:85 L.chalumnae:85

Q9HP76              	100.00%		H3BFA5              	100.00%
                    	       		H3AEE9              	61.85%
                    	       		H3BHF1              	58.59%
Bootstrap support for Q9HP76 as seed ortholog is 100%.
Bootstrap support for H3BFA5 as seed ortholog is 100%.

Group of orthologs #274. Best score 85 bits
Score difference with first non-orthologous sequence - H.salinarum:85 L.chalumnae:85

Q06847              	100.00%		H3B6V2              	100.00%
Bootstrap support for Q06847 as seed ortholog is 100%.
Bootstrap support for H3B6V2 as seed ortholog is 100%.

Group of orthologs #275. Best score 85 bits
Score difference with first non-orthologous sequence - H.salinarum:85 L.chalumnae:15

Q9HPP2              	100.00%		H3B3W3              	100.00%
Bootstrap support for Q9HPP2 as seed ortholog is 100%.
Bootstrap support for H3B3W3 as seed ortholog is 69%.
Alternative seed ortholog is H3B355 (15 bits away from this cluster)

Group of orthologs #276. Best score 85 bits
Score difference with first non-orthologous sequence - H.salinarum:85 L.chalumnae:85

Q9HP48              	100.00%		H3BCW2              	100.00%
Bootstrap support for Q9HP48 as seed ortholog is 100%.
Bootstrap support for H3BCW2 as seed ortholog is 100%.

Group of orthologs #277. Best score 84 bits
Score difference with first non-orthologous sequence - H.salinarum:84 L.chalumnae:84

Q9HPN7              	100.00%		H3AL98              	100.00%
Bootstrap support for Q9HPN7 as seed ortholog is 100%.
Bootstrap support for H3AL98 as seed ortholog is 100%.

Group of orthologs #278. Best score 83 bits
Score difference with first non-orthologous sequence - H.salinarum:83 L.chalumnae:83

P50562              	100.00%		H2ZRJ2              	100.00%
                    	       		H3ARJ1              	85.71%
                    	       		H3AA47              	64.64%
Bootstrap support for P50562 as seed ortholog is 100%.
Bootstrap support for H2ZRJ2 as seed ortholog is 100%.

Group of orthologs #279. Best score 83 bits
Score difference with first non-orthologous sequence - H.salinarum:83 L.chalumnae:83

Q9HNL8              	100.00%		H3AUG1              	100.00%
Bootstrap support for Q9HNL8 as seed ortholog is 100%.
Bootstrap support for H3AUG1 as seed ortholog is 100%.

Group of orthologs #280. Best score 83 bits
Score difference with first non-orthologous sequence - H.salinarum:83 L.chalumnae:41

Q9HS15              	100.00%		H3AVF5              	100.00%
Bootstrap support for Q9HS15 as seed ortholog is 100%.
Bootstrap support for H3AVF5 as seed ortholog is 98%.

Group of orthologs #281. Best score 82 bits
Score difference with first non-orthologous sequence - H.salinarum:82 L.chalumnae:82

Q9HRJ9              	100.00%		O03848              	100.00%
Bootstrap support for Q9HRJ9 as seed ortholog is 100%.
Bootstrap support for O03848 as seed ortholog is 100%.

Group of orthologs #282. Best score 81 bits
Score difference with first non-orthologous sequence - H.salinarum:81 L.chalumnae:81

Q9HMS7              	100.00%		H3A0E8              	100.00%
Q9HRF7              	15.93%		H2ZWV6              	50.77%
Q9HRF2              	9.21%		
Q9HN79              	7.15%		
Bootstrap support for Q9HMS7 as seed ortholog is 100%.
Bootstrap support for H3A0E8 as seed ortholog is 100%.

Group of orthologs #283. Best score 81 bits
Score difference with first non-orthologous sequence - H.salinarum:81 L.chalumnae:81

Q9HNE7              	100.00%		H3AM99              	100.00%
Bootstrap support for Q9HNE7 as seed ortholog is 100%.
Bootstrap support for H3AM99 as seed ortholog is 100%.

Group of orthologs #284. Best score 81 bits
Score difference with first non-orthologous sequence - H.salinarum:81 L.chalumnae:81

Q9HR24              	100.00%		M3XJB8              	100.00%
Bootstrap support for Q9HR24 as seed ortholog is 100%.
Bootstrap support for M3XJB8 as seed ortholog is 100%.

Group of orthologs #285. Best score 79 bits
Score difference with first non-orthologous sequence - H.salinarum:79 L.chalumnae:18

Q9HPD8              	100.00%		H3AY50              	100.00%
Q9HP88              	49.80%		H3B1Q8              	35.56%
Bootstrap support for Q9HPD8 as seed ortholog is 100%.
Bootstrap support for H3AY50 as seed ortholog is 59%.
Alternative seed ortholog is H3AHU6 (18 bits away from this cluster)

Group of orthologs #286. Best score 78 bits
Score difference with first non-orthologous sequence - H.salinarum:78 L.chalumnae:78

Q9HN71              	100.00%		H3AK40              	100.00%
Q9HQ24              	11.35%		
Bootstrap support for Q9HN71 as seed ortholog is 100%.
Bootstrap support for H3AK40 as seed ortholog is 100%.

Group of orthologs #287. Best score 77 bits
Score difference with first non-orthologous sequence - H.salinarum:77 L.chalumnae:77

Q9HN07              	100.00%		H3ANL8              	100.00%
                    	       		H3AV10              	21.28%
                    	       		H3B4G8              	17.72%
                    	       		H2ZT01              	8.72%
Bootstrap support for Q9HN07 as seed ortholog is 100%.
Bootstrap support for H3ANL8 as seed ortholog is 100%.

Group of orthologs #288. Best score 77 bits
Score difference with first non-orthologous sequence - H.salinarum:77 L.chalumnae:77

Q9HN45              	100.00%		H3AAA4              	100.00%
Bootstrap support for Q9HN45 as seed ortholog is 100%.
Bootstrap support for H3AAA4 as seed ortholog is 100%.

Group of orthologs #289. Best score 76 bits
Score difference with first non-orthologous sequence - H.salinarum:76 L.chalumnae:76

Q9V2W4              	100.00%		H3ARX8              	100.00%
Bootstrap support for Q9V2W4 as seed ortholog is 100%.
Bootstrap support for H3ARX8 as seed ortholog is 100%.

Group of orthologs #290. Best score 76 bits
Score difference with first non-orthologous sequence - H.salinarum:76 L.chalumnae:76

Q9HMR1              	100.00%		M3XIF7              	100.00%
Bootstrap support for Q9HMR1 as seed ortholog is 100%.
Bootstrap support for M3XIF7 as seed ortholog is 100%.

Group of orthologs #291. Best score 76 bits
Score difference with first non-orthologous sequence - H.salinarum:76 L.chalumnae:76

Q9HQJ3              	100.00%		H3BIK6              	100.00%
Bootstrap support for Q9HQJ3 as seed ortholog is 100%.
Bootstrap support for H3BIK6 as seed ortholog is 100%.

Group of orthologs #292. Best score 75 bits
Score difference with first non-orthologous sequence - H.salinarum:75 L.chalumnae:75

Q9HNP2              	100.00%		H3B183              	100.00%
Bootstrap support for Q9HNP2 as seed ortholog is 100%.
Bootstrap support for H3B183 as seed ortholog is 100%.

Group of orthologs #293. Best score 74 bits
Score difference with first non-orthologous sequence - H.salinarum:74 L.chalumnae:74

Q9HRA5              	100.00%		H3AP00              	100.00%
Bootstrap support for Q9HRA5 as seed ortholog is 100%.
Bootstrap support for H3AP00 as seed ortholog is 100%.

Group of orthologs #294. Best score 73 bits
Score difference with first non-orthologous sequence - H.salinarum:73 L.chalumnae:73

Q9HHV6              	100.00%		H3AV80              	100.00%
                    	       		H2ZSN5              	75.67%
                    	       		H3AB41              	35.44%
Bootstrap support for Q9HHV6 as seed ortholog is 100%.
Bootstrap support for H3AV80 as seed ortholog is 100%.

Group of orthologs #295. Best score 73 bits
Score difference with first non-orthologous sequence - H.salinarum:73 L.chalumnae:73

Q9HQZ3              	100.00%		H3AGJ0              	100.00%
                    	       		H3A5Q2              	9.18%
Bootstrap support for Q9HQZ3 as seed ortholog is 100%.
Bootstrap support for H3AGJ0 as seed ortholog is 100%.

Group of orthologs #296. Best score 73 bits
Score difference with first non-orthologous sequence - H.salinarum:73 L.chalumnae:73

Q9HPB9              	100.00%		H3ATQ3              	100.00%
Bootstrap support for Q9HPB9 as seed ortholog is 100%.
Bootstrap support for H3ATQ3 as seed ortholog is 100%.

Group of orthologs #297. Best score 73 bits
Score difference with first non-orthologous sequence - H.salinarum:73 L.chalumnae:30

Q9HNV3              	100.00%		H3BG24              	100.00%
Bootstrap support for Q9HNV3 as seed ortholog is 100%.
Bootstrap support for H3BG24 as seed ortholog is 83%.

Group of orthologs #298. Best score 72 bits
Score difference with first non-orthologous sequence - H.salinarum:72 L.chalumnae:13

Q9HNP6              	100.00%		H3ASP7              	100.00%
Bootstrap support for Q9HNP6 as seed ortholog is 100%.
Bootstrap support for H3ASP7 as seed ortholog is 63%.
Alternative seed ortholog is H3BGZ8 (13 bits away from this cluster)

Group of orthologs #299. Best score 72 bits
Score difference with first non-orthologous sequence - H.salinarum:21 L.chalumnae:72

Q9HSD1              	100.00%		H3BCJ0              	100.00%
Bootstrap support for Q9HSD1 as seed ortholog is 72%.
Alternative seed ortholog is Q9HNJ2 (21 bits away from this cluster)
Bootstrap support for H3BCJ0 as seed ortholog is 100%.

Group of orthologs #300. Best score 71 bits
Score difference with first non-orthologous sequence - H.salinarum:71 L.chalumnae:71

Q9HNK3              	100.00%		H3ANK7              	100.00%
Bootstrap support for Q9HNK3 as seed ortholog is 100%.
Bootstrap support for H3ANK7 as seed ortholog is 100%.

Group of orthologs #301. Best score 71 bits
Score difference with first non-orthologous sequence - H.salinarum:71 L.chalumnae:7

Q9HQI6              	100.00%		M3XIH8              	100.00%
Bootstrap support for Q9HQI6 as seed ortholog is 100%.
Bootstrap support for M3XIH8 as seed ortholog is 41%.
Alternative seed ortholog is H3B0X3 (7 bits away from this cluster)

Group of orthologs #302. Best score 70 bits
Score difference with first non-orthologous sequence - H.salinarum:70 L.chalumnae:70

Q9HP66              	100.00%		H3AC43              	100.00%
Bootstrap support for Q9HP66 as seed ortholog is 100%.
Bootstrap support for H3AC43 as seed ortholog is 100%.

Group of orthologs #303. Best score 69 bits
Score difference with first non-orthologous sequence - H.salinarum:69 L.chalumnae:69

O46709              	100.00%		H2ZY23              	100.00%
Q9HMD0              	6.47%		M3XI97              	27.78%
Bootstrap support for O46709 as seed ortholog is 100%.
Bootstrap support for H2ZY23 as seed ortholog is 100%.

Group of orthologs #304. Best score 69 bits
Score difference with first non-orthologous sequence - H.salinarum:69 L.chalumnae:69

Q9HSS5              	100.00%		H3APB3              	100.00%
                    	       		H3AQV9              	46.76%
Bootstrap support for Q9HSS5 as seed ortholog is 100%.
Bootstrap support for H3APB3 as seed ortholog is 100%.

Group of orthologs #305. Best score 69 bits
Score difference with first non-orthologous sequence - H.salinarum:69 L.chalumnae:9

Q9HS33              	100.00%		H3AY51              	100.00%
                    	       		H3AYT8              	29.50%
Bootstrap support for Q9HS33 as seed ortholog is 100%.
Bootstrap support for H3AY51 as seed ortholog is 75%.

Group of orthologs #306. Best score 69 bits
Score difference with first non-orthologous sequence - H.salinarum:69 L.chalumnae:69

Q9HQH3              	100.00%		H3AAY7              	100.00%
Bootstrap support for Q9HQH3 as seed ortholog is 100%.
Bootstrap support for H3AAY7 as seed ortholog is 100%.

Group of orthologs #307. Best score 69 bits
Score difference with first non-orthologous sequence - H.salinarum:69 L.chalumnae:69

Q9HRQ4              	100.00%		H3ABU7              	100.00%
Bootstrap support for Q9HRQ4 as seed ortholog is 100%.
Bootstrap support for H3ABU7 as seed ortholog is 100%.

Group of orthologs #308. Best score 69 bits
Score difference with first non-orthologous sequence - H.salinarum:69 L.chalumnae:69

Q9HRI5              	100.00%		H3AG59              	100.00%
Bootstrap support for Q9HRI5 as seed ortholog is 100%.
Bootstrap support for H3AG59 as seed ortholog is 100%.

Group of orthologs #309. Best score 69 bits
Score difference with first non-orthologous sequence - H.salinarum:69 L.chalumnae:69

Q9HR27              	100.00%		H3B4I9              	100.00%
Bootstrap support for Q9HR27 as seed ortholog is 100%.
Bootstrap support for H3B4I9 as seed ortholog is 100%.

Group of orthologs #310. Best score 69 bits
Score difference with first non-orthologous sequence - H.salinarum:69 L.chalumnae:69

Q9HQJ1              	100.00%		H3BDL8              	100.00%
Bootstrap support for Q9HQJ1 as seed ortholog is 100%.
Bootstrap support for H3BDL8 as seed ortholog is 100%.

Group of orthologs #311. Best score 68 bits
Score difference with first non-orthologous sequence - H.salinarum:68 L.chalumnae:68

Q9HNF8              	100.00%		H3BB88              	100.00%
Q9HS64              	8.80%		H2ZY28              	64.61%
Bootstrap support for Q9HNF8 as seed ortholog is 100%.
Bootstrap support for H3BB88 as seed ortholog is 100%.

Group of orthologs #312. Best score 68 bits
Score difference with first non-orthologous sequence - H.salinarum:68 L.chalumnae:68

Q9HQH8              	100.00%		H3AJB8              	100.00%
                    	       		H3BCA1              	11.32%
Bootstrap support for Q9HQH8 as seed ortholog is 100%.
Bootstrap support for H3AJB8 as seed ortholog is 100%.

Group of orthologs #313. Best score 68 bits
Score difference with first non-orthologous sequence - H.salinarum:68 L.chalumnae:68

Q9HNX7              	100.00%		H3BIP8              	100.00%
                    	       		H3B6I8              	40.11%
Bootstrap support for Q9HNX7 as seed ortholog is 100%.
Bootstrap support for H3BIP8 as seed ortholog is 100%.

Group of orthologs #314. Best score 67 bits
Score difference with first non-orthologous sequence - H.salinarum:67 L.chalumnae:67

Q9HN02              	100.00%		H2ZTZ1              	100.00%
Q9HHN9              	13.26%		
Bootstrap support for Q9HN02 as seed ortholog is 100%.
Bootstrap support for H2ZTZ1 as seed ortholog is 100%.

Group of orthologs #315. Best score 66 bits
Score difference with first non-orthologous sequence - H.salinarum:66 L.chalumnae:22

Q9HNA0              	100.00%		H3AX93              	100.00%
                    	       		H3B7H7              	70.22%
                    	       		H3AZZ9              	44.38%
Bootstrap support for Q9HNA0 as seed ortholog is 100%.
Bootstrap support for H3AX93 as seed ortholog is 83%.

Group of orthologs #316. Best score 66 bits
Score difference with first non-orthologous sequence - H.salinarum:66 L.chalumnae:17

Q9HRF6              	100.00%		H3A5P1              	100.00%
Q9HQC0              	11.24%		
Bootstrap support for Q9HRF6 as seed ortholog is 100%.
Bootstrap support for H3A5P1 as seed ortholog is 70%.
Alternative seed ortholog is H2ZYK7 (17 bits away from this cluster)

Group of orthologs #317. Best score 66 bits
Score difference with first non-orthologous sequence - H.salinarum:66 L.chalumnae:66

Q9HNL1              	100.00%		H3AC68              	100.00%
Bootstrap support for Q9HNL1 as seed ortholog is 100%.
Bootstrap support for H3AC68 as seed ortholog is 100%.

Group of orthologs #318. Best score 64 bits
Score difference with first non-orthologous sequence - H.salinarum:64 L.chalumnae:64

Q9HRY0              	100.00%		H3ARE2              	100.00%
                    	       		H3ABV3              	36.22%
Bootstrap support for Q9HRY0 as seed ortholog is 100%.
Bootstrap support for H3ARE2 as seed ortholog is 100%.

Group of orthologs #319. Best score 64 bits
Score difference with first non-orthologous sequence - H.salinarum:64 L.chalumnae:64

Q9HSG8              	100.00%		H3AU25              	100.00%
Bootstrap support for Q9HSG8 as seed ortholog is 100%.
Bootstrap support for H3AU25 as seed ortholog is 100%.

Group of orthologs #320. Best score 64 bits
Score difference with first non-orthologous sequence - H.salinarum:64 L.chalumnae:14

Q9HSD9              	100.00%		H3BEE6              	100.00%
Bootstrap support for Q9HSD9 as seed ortholog is 100%.
Bootstrap support for H3BEE6 as seed ortholog is 76%.

Group of orthologs #321. Best score 63 bits
Score difference with first non-orthologous sequence - H.salinarum:63 L.chalumnae:14

Q9HPT9              	100.00%		H3AIW3              	100.00%
                    	       		H3AIK7              	25.17%
Bootstrap support for Q9HPT9 as seed ortholog is 100%.
Bootstrap support for H3AIW3 as seed ortholog is 56%.
Alternative seed ortholog is H3ALJ6 (14 bits away from this cluster)

Group of orthologs #322. Best score 62 bits
Score difference with first non-orthologous sequence - H.salinarum:62 L.chalumnae:62

Q9HPS3              	100.00%		H3A0E0              	100.00%
                    	       		H3B4H4              	71.33%
Bootstrap support for Q9HPS3 as seed ortholog is 100%.
Bootstrap support for H3A0E0 as seed ortholog is 100%.

Group of orthologs #323. Best score 62 bits
Score difference with first non-orthologous sequence - H.salinarum:62 L.chalumnae:62

Q9HP40              	100.00%		H2ZSH0              	100.00%
Bootstrap support for Q9HP40 as seed ortholog is 100%.
Bootstrap support for H2ZSH0 as seed ortholog is 100%.

Group of orthologs #324. Best score 62 bits
Score difference with first non-orthologous sequence - H.salinarum:62 L.chalumnae:62

Q9HQJ4              	100.00%		H3A3E4              	100.00%
Bootstrap support for Q9HQJ4 as seed ortholog is 100%.
Bootstrap support for H3A3E4 as seed ortholog is 100%.

Group of orthologs #325. Best score 62 bits
Score difference with first non-orthologous sequence - H.salinarum:62 L.chalumnae:62

Q9HMM5              	100.00%		H3AEZ7              	100.00%
Bootstrap support for Q9HMM5 as seed ortholog is 100%.
Bootstrap support for H3AEZ7 as seed ortholog is 100%.

Group of orthologs #326. Best score 62 bits
Score difference with first non-orthologous sequence - H.salinarum:62 L.chalumnae:62

Q9HMN2              	100.00%		H3B3A9              	100.00%
Bootstrap support for Q9HMN2 as seed ortholog is 100%.
Bootstrap support for H3B3A9 as seed ortholog is 100%.

Group of orthologs #327. Best score 61 bits
Score difference with first non-orthologous sequence - H.salinarum:61 L.chalumnae:61

Q9HRT2              	100.00%		H3AML1              	100.00%
Bootstrap support for Q9HRT2 as seed ortholog is 100%.
Bootstrap support for H3AML1 as seed ortholog is 100%.

Group of orthologs #328. Best score 60 bits
Score difference with first non-orthologous sequence - H.salinarum:60 L.chalumnae:8

Q9HR56              	100.00%		H3AE33              	100.00%
Bootstrap support for Q9HR56 as seed ortholog is 100%.
Bootstrap support for H3AE33 as seed ortholog is 57%.
Alternative seed ortholog is H2ZSG8 (8 bits away from this cluster)

Group of orthologs #329. Best score 58 bits
Score difference with first non-orthologous sequence - H.salinarum:58 L.chalumnae:58

Q9HPZ2              	100.00%		H3A6E9              	100.00%
O51997              	9.09%		H3BEF1              	86.56%
                    	       		H3A1W8              	84.58%
                    	       		H2ZRV2              	62.85%
                    	       		H3B5V2              	29.12%
                    	       		H3BC85              	28.59%
                    	       		H3BH10              	25.82%
                    	       		H3B5C3              	25.69%
                    	       		H2ZY90              	21.08%
                    	       		H3B1B6              	20.16%
                    	       		H3AGK3              	18.97%
                    	       		H3APB1              	18.97%
                    	       		H3BBN1              	18.58%
                    	       		H3B5A9              	17.52%
                    	       		H3AYD3              	17.00%
                    	       		H3BDW2              	16.73%
                    	       		H2ZTV6              	16.34%
                    	       		H3AX40              	15.15%
                    	       		H3AI73              	14.10%
                    	       		H3B659              	13.83%
                    	       		H3A9G7              	13.57%
                    	       		H3AQP2              	13.18%
                    	       		H3B6Y3              	13.04%
                    	       		H3AB20              	12.91%
                    	       		H3BBW4              	12.38%
                    	       		H3ASF2              	5.01%
Bootstrap support for Q9HPZ2 as seed ortholog is 100%.
Bootstrap support for H3A6E9 as seed ortholog is 100%.

Group of orthologs #330. Best score 58 bits
Score difference with first non-orthologous sequence - H.salinarum:58 L.chalumnae:2

Q9HNB2              	100.00%		H2ZTL2              	100.00%
                    	       		H3AU41              	11.88%
                    	       		H3AHU7              	8.88%
Bootstrap support for Q9HNB2 as seed ortholog is 100%.
Bootstrap support for H2ZTL2 as seed ortholog is 48%.
Alternative seed ortholog is H3ATQ9 (2 bits away from this cluster)

Group of orthologs #331. Best score 58 bits
Score difference with first non-orthologous sequence - H.salinarum:58 L.chalumnae:3

Q9HQE2              	100.00%		H3ALH3              	100.00%
Bootstrap support for Q9HQE2 as seed ortholog is 100%.
Bootstrap support for H3ALH3 as seed ortholog is 54%.
Alternative seed ortholog is H3BAI4 (3 bits away from this cluster)

Group of orthologs #332. Best score 58 bits
Score difference with first non-orthologous sequence - H.salinarum:58 L.chalumnae:14

Q9HS34              	100.00%		H3AMM8              	100.00%
Bootstrap support for Q9HS34 as seed ortholog is 100%.
Bootstrap support for H3AMM8 as seed ortholog is 69%.
Alternative seed ortholog is H3AHZ8 (14 bits away from this cluster)

Group of orthologs #333. Best score 56 bits
Score difference with first non-orthologous sequence - H.salinarum:56 L.chalumnae:56

Q9HR08              	100.00%		H3AP13              	100.00%
Bootstrap support for Q9HR08 as seed ortholog is 100%.
Bootstrap support for H3AP13 as seed ortholog is 100%.

Group of orthologs #334. Best score 56 bits
Score difference with first non-orthologous sequence - H.salinarum:56 L.chalumnae:56

Q9HQS1              	100.00%		H3ARI4              	100.00%
Bootstrap support for Q9HQS1 as seed ortholog is 100%.
Bootstrap support for H3ARI4 as seed ortholog is 100%.

Group of orthologs #335. Best score 56 bits
Score difference with first non-orthologous sequence - H.salinarum:56 L.chalumnae:56

Q9HRM1              	100.00%		O03171              	100.00%
Bootstrap support for Q9HRM1 as seed ortholog is 100%.
Bootstrap support for O03171 as seed ortholog is 100%.

Group of orthologs #336. Best score 55 bits
Score difference with first non-orthologous sequence - H.salinarum:55 L.chalumnae:55

Q9HPB7              	100.00%		H3B0Y4              	100.00%
Bootstrap support for Q9HPB7 as seed ortholog is 100%.
Bootstrap support for H3B0Y4 as seed ortholog is 100%.

Group of orthologs #337. Best score 54 bits
Score difference with first non-orthologous sequence - H.salinarum:54 L.chalumnae:54

Q9HR25              	100.00%		H3A0B4              	100.00%
Q9HP14              	22.15%		
Bootstrap support for Q9HR25 as seed ortholog is 100%.
Bootstrap support for H3A0B4 as seed ortholog is 100%.

Group of orthologs #338. Best score 54 bits
Score difference with first non-orthologous sequence - H.salinarum:54 L.chalumnae:54

Q9HNJ9              	100.00%		H3ABU9              	100.00%
Q9HSH2              	5.27%		
Bootstrap support for Q9HNJ9 as seed ortholog is 100%.
Bootstrap support for H3ABU9 as seed ortholog is 100%.

Group of orthologs #339. Best score 53 bits
Score difference with first non-orthologous sequence - H.salinarum:53 L.chalumnae:53

Q9HPC3              	100.00%		H3A097              	100.00%
                    	       		H3AG26              	97.47%
                    	       		H3BG90              	90.30%
Bootstrap support for Q9HPC3 as seed ortholog is 100%.
Bootstrap support for H3A097 as seed ortholog is 100%.

Group of orthologs #340. Best score 52 bits
Score difference with first non-orthologous sequence - H.salinarum:52 L.chalumnae:52

Q9HSV2              	100.00%		H3AI66              	100.00%
Q9HRP9              	12.50%		
Bootstrap support for Q9HSV2 as seed ortholog is 100%.
Bootstrap support for H3AI66 as seed ortholog is 100%.

Group of orthologs #341. Best score 52 bits
Score difference with first non-orthologous sequence - H.salinarum:52 L.chalumnae:52

Q9HP28              	100.00%		H3B406              	100.00%
                    	       		H2ZYG0              	42.49%
Bootstrap support for Q9HP28 as seed ortholog is 100%.
Bootstrap support for H3B406 as seed ortholog is 100%.

Group of orthologs #342. Best score 52 bits
Score difference with first non-orthologous sequence - H.salinarum:52 L.chalumnae:52

P13575              	100.00%		H3B8D6              	100.00%
                    	       		H2ZTW2              	42.14%
Bootstrap support for P13575 as seed ortholog is 100%.
Bootstrap support for H3B8D6 as seed ortholog is 100%.

Group of orthologs #343. Best score 52 bits
Score difference with first non-orthologous sequence - H.salinarum:52 L.chalumnae:52

Q9HS42              	100.00%		H2ZYQ9              	100.00%
Bootstrap support for Q9HS42 as seed ortholog is 100%.
Bootstrap support for H2ZYQ9 as seed ortholog is 100%.

Group of orthologs #344. Best score 50 bits
Score difference with first non-orthologous sequence - H.salinarum:50 L.chalumnae:5

Q9HQ12              	100.00%		H2ZXI6              	100.00%
                    	       		H3AKE9              	46.67%
                    	       		H3AWW3              	11.01%
Bootstrap support for Q9HQ12 as seed ortholog is 100%.
Bootstrap support for H2ZXI6 as seed ortholog is 60%.
Alternative seed ortholog is H3AKK7 (5 bits away from this cluster)

Group of orthologs #345. Best score 50 bits
Score difference with first non-orthologous sequence - H.salinarum:50 L.chalumnae:50

Q9HNR3              	100.00%		H3AGP5              	100.00%
Bootstrap support for Q9HNR3 as seed ortholog is 100%.
Bootstrap support for H3AGP5 as seed ortholog is 100%.

Group of orthologs #346. Best score 50 bits
Score difference with first non-orthologous sequence - H.salinarum:50 L.chalumnae:50

Q9HRT8              	100.00%		H3ALE4              	100.00%
Bootstrap support for Q9HRT8 as seed ortholog is 100%.
Bootstrap support for H3ALE4 as seed ortholog is 100%.

Group of orthologs #347. Best score 49 bits
Score difference with first non-orthologous sequence - H.salinarum:49 L.chalumnae:49

Q9HST1              	100.00%		H3AC41              	100.00%
                    	       		H3BCW9              	53.53%
Bootstrap support for Q9HST1 as seed ortholog is 100%.
Bootstrap support for H3AC41 as seed ortholog is 100%.

Group of orthologs #348. Best score 48 bits
Score difference with first non-orthologous sequence - H.salinarum:48 L.chalumnae:48

Q9HPV3              	100.00%		H3A4L5              	100.00%
Q9HPE1              	48.33%		
Bootstrap support for Q9HPV3 as seed ortholog is 100%.
Bootstrap support for H3A4L5 as seed ortholog is 100%.

Group of orthologs #349. Best score 47 bits
Score difference with first non-orthologous sequence - H.salinarum:47 L.chalumnae:47

Q9HRT7              	100.00%		H3AH26              	100.00%
                    	       		H3AXL2              	100.00%
Bootstrap support for Q9HRT7 as seed ortholog is 100%.
Bootstrap support for H3AH26 as seed ortholog is 100%.
Bootstrap support for H3AXL2 as seed ortholog is 100%.

Group of orthologs #350. Best score 47 bits
Score difference with first non-orthologous sequence - H.salinarum:47 L.chalumnae:47

Q9HNQ6              	100.00%		H2ZU31              	100.00%
Bootstrap support for Q9HNQ6 as seed ortholog is 100%.
Bootstrap support for H2ZU31 as seed ortholog is 100%.

Group of orthologs #351. Best score 47 bits
Score difference with first non-orthologous sequence - H.salinarum:47 L.chalumnae:47

Q9HS20              	100.00%		H3B9I9              	100.00%
Bootstrap support for Q9HS20 as seed ortholog is 100%.
Bootstrap support for H3B9I9 as seed ortholog is 100%.

Group of orthologs #352. Best score 46 bits
Score difference with first non-orthologous sequence - H.salinarum:46 L.chalumnae:46

Q9HP73              	100.00%		H3AVQ3              	100.00%
                    	       		H3AAL5              	55.23%
Bootstrap support for Q9HP73 as seed ortholog is 100%.
Bootstrap support for H3AVQ3 as seed ortholog is 100%.

Group of orthologs #353. Best score 46 bits
Score difference with first non-orthologous sequence - H.salinarum:46 L.chalumnae:46

Q9HMV9              	100.00%		H3AM71              	100.00%
Bootstrap support for Q9HMV9 as seed ortholog is 100%.
Bootstrap support for H3AM71 as seed ortholog is 100%.

Group of orthologs #354. Best score 45 bits
Score difference with first non-orthologous sequence - H.salinarum:45 L.chalumnae:45

Q9HP06              	100.00%		H3B7A3              	100.00%
                    	       		H3AAV5              	31.57%
                    	       		H3B9F6              	28.41%
                    	       		H3ASC2              	14.02%
                    	       		H3AV21              	10.86%
                    	       		H3AFZ7              	8.33%
                    	       		M3XGY0              	6.69%
Bootstrap support for Q9HP06 as seed ortholog is 100%.
Bootstrap support for H3B7A3 as seed ortholog is 100%.

Group of orthologs #355. Best score 45 bits
Score difference with first non-orthologous sequence - H.salinarum:45 L.chalumnae:45

Q9HP54              	100.00%		M3XHS0              	100.00%
                    	       		H3AIH3              	58.95%
                    	       		M3XKQ9              	21.60%
                    	       		H2ZT03              	6.52%
                    	       		H3A2C6              	6.42%
                    	       		H3B1U2              	5.16%
Bootstrap support for Q9HP54 as seed ortholog is 100%.
Bootstrap support for M3XHS0 as seed ortholog is 100%.

Group of orthologs #356. Best score 45 bits
Score difference with first non-orthologous sequence - H.salinarum:45 L.chalumnae:45

Q9HS29              	100.00%		H3AMM7              	100.00%
                    	       		H3AIR2              	53.88%
Bootstrap support for Q9HS29 as seed ortholog is 100%.
Bootstrap support for H3AMM7 as seed ortholog is 100%.

Group of orthologs #357. Best score 45 bits
Score difference with first non-orthologous sequence - H.salinarum:45 L.chalumnae:45

Q9HPC0              	100.00%		H3B875              	100.00%
Bootstrap support for Q9HPC0 as seed ortholog is 100%.
Bootstrap support for H3B875 as seed ortholog is 100%.

Group of orthologs #358. Best score 42 bits
Score difference with first non-orthologous sequence - H.salinarum:42 L.chalumnae:42

Q9HP78              	100.00%		H3AZS2              	100.00%
Bootstrap support for Q9HP78 as seed ortholog is 100%.
Bootstrap support for H3AZS2 as seed ortholog is 100%.