###################################
569 groups of orthologs
625 in-paralogs from G.intestinalis
615 in-paralogs from P.knowlesi
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 1578 bits
Score difference with first non-orthologous sequence - G.intestinalis:36 P.knowlesi:251

A8BUK9              	100.00%		B3L363              	100.00%
Bootstrap support for A8BUK9 as seed ortholog is 37%.
Alternative seed ortholog is A8BL65 (36 bits away from this cluster)
Bootstrap support for B3L363 as seed ortholog is 96%.

Group of orthologs #2. Best score 930 bits
Score difference with first non-orthologous sequence - G.intestinalis:768 P.knowlesi:617

A8BU59              	100.00%		B3L9Q6              	100.00%
Bootstrap support for A8BU59 as seed ortholog is 100%.
Bootstrap support for B3L9Q6 as seed ortholog is 100%.

Group of orthologs #3. Best score 899 bits
Score difference with first non-orthologous sequence - G.intestinalis:899 P.knowlesi:711

E2RU41              	100.00%		B3L8Q4              	100.00%
Bootstrap support for E2RU41 as seed ortholog is 100%.
Bootstrap support for B3L8Q4 as seed ortholog is 100%.

Group of orthologs #4. Best score 882 bits
Score difference with first non-orthologous sequence - G.intestinalis:882 P.knowlesi:882

A8B2N4              	100.00%		B3LB54              	100.00%
Bootstrap support for A8B2N4 as seed ortholog is 100%.
Bootstrap support for B3LB54 as seed ortholog is 100%.

Group of orthologs #5. Best score 860 bits
Score difference with first non-orthologous sequence - G.intestinalis:339 P.knowlesi:216

A8B4F1              	100.00%		B3L8U1              	100.00%
Bootstrap support for A8B4F1 as seed ortholog is 100%.
Bootstrap support for B3L8U1 as seed ortholog is 99%.

Group of orthologs #6. Best score 849 bits
Score difference with first non-orthologous sequence - G.intestinalis:849 P.knowlesi:849

A8BVT2              	100.00%		B3LBE9              	100.00%
Bootstrap support for A8BVT2 as seed ortholog is 100%.
Bootstrap support for B3LBE9 as seed ortholog is 100%.

Group of orthologs #7. Best score 803 bits
Score difference with first non-orthologous sequence - G.intestinalis:449 P.knowlesi:288

A8BCR6              	100.00%		B3L1A4              	100.00%
Bootstrap support for A8BCR6 as seed ortholog is 100%.
Bootstrap support for B3L1A4 as seed ortholog is 99%.

Group of orthologs #8. Best score 795 bits
Score difference with first non-orthologous sequence - G.intestinalis:795 P.knowlesi:795

A8BEI6              	100.00%		B3L3M0              	100.00%
Bootstrap support for A8BEI6 as seed ortholog is 100%.
Bootstrap support for B3L3M0 as seed ortholog is 100%.

Group of orthologs #9. Best score 787 bits
Score difference with first non-orthologous sequence - G.intestinalis:713 P.knowlesi:787

A8BPC0              	100.00%		B3L1P1              	100.00%
                    	       		B3L347              	82.71%
Bootstrap support for A8BPC0 as seed ortholog is 100%.
Bootstrap support for B3L1P1 as seed ortholog is 100%.

Group of orthologs #10. Best score 765 bits
Score difference with first non-orthologous sequence - G.intestinalis:765 P.knowlesi:765

E2RU90              	100.00%		B3LBF9              	100.00%
Bootstrap support for E2RU90 as seed ortholog is 100%.
Bootstrap support for B3LBF9 as seed ortholog is 100%.

Group of orthologs #11. Best score 743 bits
Score difference with first non-orthologous sequence - G.intestinalis:357 P.knowlesi:129

A8BUY7              	100.00%		B3L7L4              	100.00%
Bootstrap support for A8BUY7 as seed ortholog is 100%.
Bootstrap support for B3L7L4 as seed ortholog is 98%.

Group of orthologs #12. Best score 723 bits
Score difference with first non-orthologous sequence - G.intestinalis:723 P.knowlesi:244

A8BWJ2              	100.00%		B3LA26              	100.00%
Bootstrap support for A8BWJ2 as seed ortholog is 100%.
Bootstrap support for B3LA26 as seed ortholog is 100%.

Group of orthologs #13. Best score 694 bits
Score difference with first non-orthologous sequence - G.intestinalis:331 P.knowlesi:172

A8B431              	100.00%		B3L2J7              	100.00%
Bootstrap support for A8B431 as seed ortholog is 100%.
Bootstrap support for B3L2J7 as seed ortholog is 99%.

Group of orthologs #14. Best score 689 bits
Score difference with first non-orthologous sequence - G.intestinalis:689 P.knowlesi:689

E2RU19              	100.00%		B3L0J5              	100.00%
Bootstrap support for E2RU19 as seed ortholog is 100%.
Bootstrap support for B3L0J5 as seed ortholog is 100%.

Group of orthologs #15. Best score 670 bits
Score difference with first non-orthologous sequence - G.intestinalis:670 P.knowlesi:670

A8BTS5              	100.00%		B3KZY4              	100.00%
Bootstrap support for A8BTS5 as seed ortholog is 100%.
Bootstrap support for B3KZY4 as seed ortholog is 100%.

Group of orthologs #16. Best score 670 bits
Score difference with first non-orthologous sequence - G.intestinalis:670 P.knowlesi:539

E2RU00              	100.00%		B3L9E5              	100.00%
Bootstrap support for E2RU00 as seed ortholog is 100%.
Bootstrap support for B3L9E5 as seed ortholog is 100%.

Group of orthologs #17. Best score 618 bits
Score difference with first non-orthologous sequence - G.intestinalis:618 P.knowlesi:128

A8B6K3              	100.00%		B3L1E0              	100.00%
Bootstrap support for A8B6K3 as seed ortholog is 100%.
Bootstrap support for B3L1E0 as seed ortholog is 98%.

Group of orthologs #18. Best score 609 bits
Score difference with first non-orthologous sequence - G.intestinalis:609 P.knowlesi:609

A8BCF5              	100.00%		B3L1S9              	100.00%
Bootstrap support for A8BCF5 as seed ortholog is 100%.
Bootstrap support for B3L1S9 as seed ortholog is 100%.

Group of orthologs #19. Best score 573 bits
Score difference with first non-orthologous sequence - G.intestinalis:104 P.knowlesi:257

A8BCP4              	100.00%		B3LCM2              	100.00%
Bootstrap support for A8BCP4 as seed ortholog is 98%.
Bootstrap support for B3LCM2 as seed ortholog is 99%.

Group of orthologs #20. Best score 572 bits
Score difference with first non-orthologous sequence - G.intestinalis:428 P.knowlesi:406

A8BVR3              	100.00%		B3L753              	100.00%
Bootstrap support for A8BVR3 as seed ortholog is 100%.
Bootstrap support for B3L753 as seed ortholog is 100%.

Group of orthologs #21. Best score 561 bits
Score difference with first non-orthologous sequence - G.intestinalis:561 P.knowlesi:561

E2RTS3              	100.00%		B3L6T7              	100.00%
Bootstrap support for E2RTS3 as seed ortholog is 100%.
Bootstrap support for B3L6T7 as seed ortholog is 100%.

Group of orthologs #22. Best score 559 bits
Score difference with first non-orthologous sequence - G.intestinalis:559 P.knowlesi:431

A8BYU1              	100.00%		B3LBT4              	100.00%
Bootstrap support for A8BYU1 as seed ortholog is 100%.
Bootstrap support for B3LBT4 as seed ortholog is 100%.

Group of orthologs #23. Best score 547 bits
Score difference with first non-orthologous sequence - G.intestinalis:547 P.knowlesi:547

E2RTV1              	100.00%		B3L402              	100.00%
Bootstrap support for E2RTV1 as seed ortholog is 100%.
Bootstrap support for B3L402 as seed ortholog is 100%.

Group of orthologs #24. Best score 544 bits
Score difference with first non-orthologous sequence - G.intestinalis:544 P.knowlesi:544

A8B827              	100.00%		B3L5F6              	100.00%
Bootstrap support for A8B827 as seed ortholog is 100%.
Bootstrap support for B3L5F6 as seed ortholog is 100%.

Group of orthologs #25. Best score 540 bits
Score difference with first non-orthologous sequence - G.intestinalis:106 P.knowlesi:24

A8B7R7              	100.00%		B3L6H5              	100.00%
Bootstrap support for A8B7R7 as seed ortholog is 99%.
Bootstrap support for B3L6H5 as seed ortholog is 92%.

Group of orthologs #26. Best score 538 bits
Score difference with first non-orthologous sequence - G.intestinalis:538 P.knowlesi:538

E2RTR0              	100.00%		B3L5D0              	100.00%
Bootstrap support for E2RTR0 as seed ortholog is 100%.
Bootstrap support for B3L5D0 as seed ortholog is 100%.

Group of orthologs #27. Best score 531 bits
Score difference with first non-orthologous sequence - G.intestinalis:531 P.knowlesi:531

A8BH31              	100.00%		B3L4C8              	100.00%
Bootstrap support for A8BH31 as seed ortholog is 100%.
Bootstrap support for B3L4C8 as seed ortholog is 100%.

Group of orthologs #28. Best score 525 bits
Score difference with first non-orthologous sequence - G.intestinalis:525 P.knowlesi:525

A8BFF8              	100.00%		B3LA84              	100.00%
                    	       		B3LAJ5              	11.09%
Bootstrap support for A8BFF8 as seed ortholog is 100%.
Bootstrap support for B3LA84 as seed ortholog is 100%.

Group of orthologs #29. Best score 506 bits
Score difference with first non-orthologous sequence - G.intestinalis:506 P.knowlesi:506

A8BSG2              	100.00%		B3L565              	100.00%
Bootstrap support for A8BSG2 as seed ortholog is 100%.
Bootstrap support for B3L565 as seed ortholog is 100%.

Group of orthologs #30. Best score 499 bits
Score difference with first non-orthologous sequence - G.intestinalis:499 P.knowlesi:499

A8BUL3              	100.00%		B3L7Y7              	100.00%
Bootstrap support for A8BUL3 as seed ortholog is 100%.
Bootstrap support for B3L7Y7 as seed ortholog is 100%.

Group of orthologs #31. Best score 488 bits
Score difference with first non-orthologous sequence - G.intestinalis:488 P.knowlesi:363

A8BPV3              	100.00%		B3KZZ1              	100.00%
Bootstrap support for A8BPV3 as seed ortholog is 100%.
Bootstrap support for B3KZZ1 as seed ortholog is 100%.

Group of orthologs #32. Best score 478 bits
Score difference with first non-orthologous sequence - G.intestinalis:223 P.knowlesi:220

A8B4W2              	100.00%		B3LAL6              	100.00%
Bootstrap support for A8B4W2 as seed ortholog is 100%.
Bootstrap support for B3LAL6 as seed ortholog is 100%.

Group of orthologs #33. Best score 478 bits
Score difference with first non-orthologous sequence - G.intestinalis:478 P.knowlesi:478

A8BFG4              	100.00%		B3L746              	100.00%
Bootstrap support for A8BFG4 as seed ortholog is 100%.
Bootstrap support for B3L746 as seed ortholog is 100%.

Group of orthologs #34. Best score 475 bits
Score difference with first non-orthologous sequence - G.intestinalis:475 P.knowlesi:475

A8BU40              	100.00%		B3L6Z9              	100.00%
Bootstrap support for A8BU40 as seed ortholog is 100%.
Bootstrap support for B3L6Z9 as seed ortholog is 100%.

Group of orthologs #35. Best score 471 bits
Score difference with first non-orthologous sequence - G.intestinalis:354 P.knowlesi:116

A8BV70              	100.00%		B3LDA3              	100.00%
                    	       		B3LAP0              	54.83%
Bootstrap support for A8BV70 as seed ortholog is 100%.
Bootstrap support for B3LDA3 as seed ortholog is 99%.

Group of orthologs #36. Best score 463 bits
Score difference with first non-orthologous sequence - G.intestinalis:463 P.knowlesi:463

A8B8R9              	100.00%		B3LCT4              	100.00%
Bootstrap support for A8B8R9 as seed ortholog is 100%.
Bootstrap support for B3LCT4 as seed ortholog is 100%.

Group of orthologs #37. Best score 456 bits
Score difference with first non-orthologous sequence - G.intestinalis:456 P.knowlesi:456

A8B8F4              	100.00%		B3L165              	100.00%
Bootstrap support for A8B8F4 as seed ortholog is 100%.
Bootstrap support for B3L165 as seed ortholog is 100%.

Group of orthologs #38. Best score 454 bits
Score difference with first non-orthologous sequence - G.intestinalis:454 P.knowlesi:454

A8B488              	100.00%		B3L842              	100.00%
Bootstrap support for A8B488 as seed ortholog is 100%.
Bootstrap support for B3L842 as seed ortholog is 100%.

Group of orthologs #39. Best score 448 bits
Score difference with first non-orthologous sequence - G.intestinalis:448 P.knowlesi:448

A8BBI5              	100.00%		B3L4B5              	100.00%
Bootstrap support for A8BBI5 as seed ortholog is 100%.
Bootstrap support for B3L4B5 as seed ortholog is 100%.

Group of orthologs #40. Best score 448 bits
Score difference with first non-orthologous sequence - G.intestinalis:448 P.knowlesi:448

A8BVD3              	100.00%		B3L7U8              	100.00%
Bootstrap support for A8BVD3 as seed ortholog is 100%.
Bootstrap support for B3L7U8 as seed ortholog is 100%.

Group of orthologs #41. Best score 446 bits
Score difference with first non-orthologous sequence - G.intestinalis:446 P.knowlesi:446

A8BY54              	100.00%		B3L7I1              	100.00%
Bootstrap support for A8BY54 as seed ortholog is 100%.
Bootstrap support for B3L7I1 as seed ortholog is 100%.

Group of orthologs #42. Best score 441 bits
Score difference with first non-orthologous sequence - G.intestinalis:441 P.knowlesi:441

A8BLK0              	100.00%		B3LAH4              	100.00%
Bootstrap support for A8BLK0 as seed ortholog is 100%.
Bootstrap support for B3LAH4 as seed ortholog is 100%.

Group of orthologs #43. Best score 440 bits
Score difference with first non-orthologous sequence - G.intestinalis:440 P.knowlesi:333

A8BQF3              	100.00%		B3KZB0              	100.00%
Bootstrap support for A8BQF3 as seed ortholog is 100%.
Bootstrap support for B3KZB0 as seed ortholog is 100%.

Group of orthologs #44. Best score 436 bits
Score difference with first non-orthologous sequence - G.intestinalis:436 P.knowlesi:436

E2RTS6              	100.00%		B3L3V4              	100.00%
Bootstrap support for E2RTS6 as seed ortholog is 100%.
Bootstrap support for B3L3V4 as seed ortholog is 100%.

Group of orthologs #45. Best score 433 bits
Score difference with first non-orthologous sequence - G.intestinalis:345 P.knowlesi:433

A8BEY6              	100.00%		B3LBS7              	100.00%
Bootstrap support for A8BEY6 as seed ortholog is 100%.
Bootstrap support for B3LBS7 as seed ortholog is 100%.

Group of orthologs #46. Best score 430 bits
Score difference with first non-orthologous sequence - G.intestinalis:430 P.knowlesi:430

A8BUP8              	100.00%		B3L7W9              	100.00%
Bootstrap support for A8BUP8 as seed ortholog is 100%.
Bootstrap support for B3L7W9 as seed ortholog is 100%.

Group of orthologs #47. Best score 422 bits
Score difference with first non-orthologous sequence - G.intestinalis:422 P.knowlesi:422

A8BGC8              	100.00%		B3L4L2              	100.00%
                    	       		B3LCB2              	5.01%
Bootstrap support for A8BGC8 as seed ortholog is 100%.
Bootstrap support for B3L4L2 as seed ortholog is 100%.

Group of orthologs #48. Best score 422 bits
Score difference with first non-orthologous sequence - G.intestinalis:321 P.knowlesi:422

A8BJ82              	100.00%		B3LDD0              	100.00%
Bootstrap support for A8BJ82 as seed ortholog is 100%.
Bootstrap support for B3LDD0 as seed ortholog is 100%.

Group of orthologs #49. Best score 421 bits
Score difference with first non-orthologous sequence - G.intestinalis:421 P.knowlesi:337

A8BD23              	100.00%		B3LAR0              	100.00%
Bootstrap support for A8BD23 as seed ortholog is 100%.
Bootstrap support for B3LAR0 as seed ortholog is 100%.

Group of orthologs #50. Best score 421 bits
Score difference with first non-orthologous sequence - G.intestinalis:318 P.knowlesi:226

A8BS66              	100.00%		B3LA76              	100.00%
Bootstrap support for A8BS66 as seed ortholog is 100%.
Bootstrap support for B3LA76 as seed ortholog is 100%.

Group of orthologs #51. Best score 420 bits
Score difference with first non-orthologous sequence - G.intestinalis:420 P.knowlesi:420

A8B2L6              	100.00%		B3L0N2              	100.00%
Bootstrap support for A8B2L6 as seed ortholog is 100%.
Bootstrap support for B3L0N2 as seed ortholog is 100%.

Group of orthologs #52. Best score 420 bits
Score difference with first non-orthologous sequence - G.intestinalis:55 P.knowlesi:60

A8BQG5              	100.00%		B3L619              	100.00%
Bootstrap support for A8BQG5 as seed ortholog is 94%.
Bootstrap support for B3L619 as seed ortholog is 95%.

Group of orthologs #53. Best score 418 bits
Score difference with first non-orthologous sequence - G.intestinalis:418 P.knowlesi:418

A8BEZ0              	100.00%		B3L8A1              	100.00%
Bootstrap support for A8BEZ0 as seed ortholog is 100%.
Bootstrap support for B3L8A1 as seed ortholog is 100%.

Group of orthologs #54. Best score 413 bits
Score difference with first non-orthologous sequence - G.intestinalis:361 P.knowlesi:413

A8BEL5              	100.00%		B3L892              	100.00%
Bootstrap support for A8BEL5 as seed ortholog is 100%.
Bootstrap support for B3L892 as seed ortholog is 100%.

Group of orthologs #55. Best score 413 bits
Score difference with first non-orthologous sequence - G.intestinalis:349 P.knowlesi:274

A8B8X0              	100.00%		B3LC00              	100.00%
Bootstrap support for A8B8X0 as seed ortholog is 100%.
Bootstrap support for B3LC00 as seed ortholog is 100%.

Group of orthologs #56. Best score 412 bits
Score difference with first non-orthologous sequence - G.intestinalis:412 P.knowlesi:412

A8BBM0              	100.00%		B3L0B3              	100.00%
Bootstrap support for A8BBM0 as seed ortholog is 100%.
Bootstrap support for B3L0B3 as seed ortholog is 100%.

Group of orthologs #57. Best score 412 bits
Score difference with first non-orthologous sequence - G.intestinalis:412 P.knowlesi:412

A8BGV6              	100.00%		B3L2P2              	100.00%
Bootstrap support for A8BGV6 as seed ortholog is 100%.
Bootstrap support for B3L2P2 as seed ortholog is 100%.

Group of orthologs #58. Best score 400 bits
Score difference with first non-orthologous sequence - G.intestinalis:341 P.knowlesi:351

A8BYV1              	100.00%		B3L5H4              	100.00%
Bootstrap support for A8BYV1 as seed ortholog is 100%.
Bootstrap support for B3L5H4 as seed ortholog is 100%.

Group of orthologs #59. Best score 394 bits
Score difference with first non-orthologous sequence - G.intestinalis:217 P.knowlesi:394

E2RU94              	100.00%		B3LAR4              	100.00%
Bootstrap support for E2RU94 as seed ortholog is 99%.
Bootstrap support for B3LAR4 as seed ortholog is 100%.

Group of orthologs #60. Best score 391 bits
Score difference with first non-orthologous sequence - G.intestinalis:391 P.knowlesi:391

E2RU11              	100.00%		B3LBB6              	100.00%
Bootstrap support for E2RU11 as seed ortholog is 100%.
Bootstrap support for B3LBB6 as seed ortholog is 100%.

Group of orthologs #61. Best score 390 bits
Score difference with first non-orthologous sequence - G.intestinalis:221 P.knowlesi:201

A8B9Q0              	100.00%		B3L6H8              	100.00%
Bootstrap support for A8B9Q0 as seed ortholog is 99%.
Bootstrap support for B3L6H8 as seed ortholog is 99%.

Group of orthologs #62. Best score 389 bits
Score difference with first non-orthologous sequence - G.intestinalis:389 P.knowlesi:389

A8BT15              	100.00%		B3L8R5              	100.00%
Bootstrap support for A8BT15 as seed ortholog is 100%.
Bootstrap support for B3L8R5 as seed ortholog is 100%.

Group of orthologs #63. Best score 389 bits
Score difference with first non-orthologous sequence - G.intestinalis:389 P.knowlesi:389

A8BZ83              	100.00%		B3LAJ1              	100.00%
Bootstrap support for A8BZ83 as seed ortholog is 100%.
Bootstrap support for B3LAJ1 as seed ortholog is 100%.

Group of orthologs #64. Best score 388 bits
Score difference with first non-orthologous sequence - G.intestinalis:388 P.knowlesi:388

A8BXH2              	100.00%		B3L4H0              	100.00%
A8BZZ4              	85.89%		
Bootstrap support for A8BXH2 as seed ortholog is 100%.
Bootstrap support for B3L4H0 as seed ortholog is 100%.

Group of orthologs #65. Best score 388 bits
Score difference with first non-orthologous sequence - G.intestinalis:388 P.knowlesi:388

E2RU38              	100.00%		B3L3L7              	100.00%
Bootstrap support for E2RU38 as seed ortholog is 100%.
Bootstrap support for B3L3L7 as seed ortholog is 100%.

Group of orthologs #66. Best score 385 bits
Score difference with first non-orthologous sequence - G.intestinalis:38 P.knowlesi:66

A8B2Z3              	100.00%		B3LCI6              	100.00%
Bootstrap support for A8B2Z3 as seed ortholog is 93%.
Bootstrap support for B3LCI6 as seed ortholog is 82%.

Group of orthologs #67. Best score 384 bits
Score difference with first non-orthologous sequence - G.intestinalis:384 P.knowlesi:384

A8BRZ3              	100.00%		B3L240              	100.00%
Bootstrap support for A8BRZ3 as seed ortholog is 100%.
Bootstrap support for B3L240 as seed ortholog is 100%.

Group of orthologs #68. Best score 381 bits
Score difference with first non-orthologous sequence - G.intestinalis:381 P.knowlesi:381

A8BR91              	100.00%		B3L8D7              	100.00%
Bootstrap support for A8BR91 as seed ortholog is 100%.
Bootstrap support for B3L8D7 as seed ortholog is 100%.

Group of orthologs #69. Best score 379 bits
Score difference with first non-orthologous sequence - G.intestinalis:191 P.knowlesi:205

A8B6X3              	100.00%		B3L971              	100.00%
                    	       		B3L1P5              	19.36%
Bootstrap support for A8B6X3 as seed ortholog is 100%.
Bootstrap support for B3L971 as seed ortholog is 100%.

Group of orthologs #70. Best score 377 bits
Score difference with first non-orthologous sequence - G.intestinalis:377 P.knowlesi:254

A8B9N2              	100.00%		B3LCI0              	100.00%
Bootstrap support for A8B9N2 as seed ortholog is 100%.
Bootstrap support for B3LCI0 as seed ortholog is 100%.

Group of orthologs #71. Best score 377 bits
Score difference with first non-orthologous sequence - G.intestinalis:377 P.knowlesi:377

E2RU63              	100.00%		B3L2S3              	100.00%
Bootstrap support for E2RU63 as seed ortholog is 100%.
Bootstrap support for B3L2S3 as seed ortholog is 100%.

Group of orthologs #72. Best score 375 bits
Score difference with first non-orthologous sequence - G.intestinalis:98 P.knowlesi:375

A8BSP4              	100.00%		B3L9D3              	100.00%
Bootstrap support for A8BSP4 as seed ortholog is 99%.
Bootstrap support for B3L9D3 as seed ortholog is 100%.

Group of orthologs #73. Best score 369 bits
Score difference with first non-orthologous sequence - G.intestinalis:221 P.knowlesi:369

A8B9U2              	100.00%		B3KZL1              	100.00%
Bootstrap support for A8B9U2 as seed ortholog is 99%.
Bootstrap support for B3KZL1 as seed ortholog is 100%.

Group of orthologs #74. Best score 368 bits
Score difference with first non-orthologous sequence - G.intestinalis:141 P.knowlesi:163

A8BMN2              	100.00%		B3L193              	100.00%
Bootstrap support for A8BMN2 as seed ortholog is 99%.
Bootstrap support for B3L193 as seed ortholog is 99%.

Group of orthologs #75. Best score 363 bits
Score difference with first non-orthologous sequence - G.intestinalis:252 P.knowlesi:178

A8BPC2              	100.00%		B3KZP7              	100.00%
Bootstrap support for A8BPC2 as seed ortholog is 100%.
Bootstrap support for B3KZP7 as seed ortholog is 100%.

Group of orthologs #76. Best score 360 bits
Score difference with first non-orthologous sequence - G.intestinalis:360 P.knowlesi:360

A8B6W3              	100.00%		B3L9R6              	100.00%
Bootstrap support for A8B6W3 as seed ortholog is 100%.
Bootstrap support for B3L9R6 as seed ortholog is 100%.

Group of orthologs #77. Best score 359 bits
Score difference with first non-orthologous sequence - G.intestinalis:359 P.knowlesi:359

A8B2X0              	100.00%		B3L070              	100.00%
Bootstrap support for A8B2X0 as seed ortholog is 100%.
Bootstrap support for B3L070 as seed ortholog is 100%.

Group of orthologs #78. Best score 359 bits
Score difference with first non-orthologous sequence - G.intestinalis:134 P.knowlesi:200

A8BG90              	100.00%		B3L794              	100.00%
Bootstrap support for A8BG90 as seed ortholog is 99%.
Bootstrap support for B3L794 as seed ortholog is 100%.

Group of orthologs #79. Best score 358 bits
Score difference with first non-orthologous sequence - G.intestinalis:358 P.knowlesi:147

A8BBP6              	100.00%		B3LCP8              	100.00%
Bootstrap support for A8BBP6 as seed ortholog is 100%.
Bootstrap support for B3LCP8 as seed ortholog is 98%.

Group of orthologs #80. Best score 354 bits
Score difference with first non-orthologous sequence - G.intestinalis:354 P.knowlesi:185

A8BAT6              	100.00%		B3KZR4              	100.00%
Bootstrap support for A8BAT6 as seed ortholog is 100%.
Bootstrap support for B3KZR4 as seed ortholog is 99%.

Group of orthologs #81. Best score 354 bits
Score difference with first non-orthologous sequence - G.intestinalis:354 P.knowlesi:53

E2RU04              	100.00%		B3L2D6              	100.00%
Bootstrap support for E2RU04 as seed ortholog is 100%.
Bootstrap support for B3L2D6 as seed ortholog is 84%.

Group of orthologs #82. Best score 352 bits
Score difference with first non-orthologous sequence - G.intestinalis:352 P.knowlesi:352

A8BXC9              	100.00%		B3L2N9              	100.00%
Bootstrap support for A8BXC9 as seed ortholog is 100%.
Bootstrap support for B3L2N9 as seed ortholog is 100%.

Group of orthologs #83. Best score 348 bits
Score difference with first non-orthologous sequence - G.intestinalis:348 P.knowlesi:279

A8B326              	100.00%		B3KZQ8              	100.00%
Bootstrap support for A8B326 as seed ortholog is 100%.
Bootstrap support for B3KZQ8 as seed ortholog is 100%.

Group of orthologs #84. Best score 348 bits
Score difference with first non-orthologous sequence - G.intestinalis:348 P.knowlesi:348

A8BMM8              	100.00%		B3L7S4              	100.00%
Bootstrap support for A8BMM8 as seed ortholog is 100%.
Bootstrap support for B3L7S4 as seed ortholog is 100%.

Group of orthologs #85. Best score 345 bits
Score difference with first non-orthologous sequence - G.intestinalis:345 P.knowlesi:345

A8B382              	100.00%		B3KZK7              	100.00%
Bootstrap support for A8B382 as seed ortholog is 100%.
Bootstrap support for B3KZK7 as seed ortholog is 100%.

Group of orthologs #86. Best score 342 bits
Score difference with first non-orthologous sequence - G.intestinalis:342 P.knowlesi:42

E2RTP7              	100.00%		B3L1D8              	100.00%
E2RTW3              	24.40%		
Bootstrap support for E2RTP7 as seed ortholog is 100%.
Bootstrap support for B3L1D8 as seed ortholog is 91%.

Group of orthologs #87. Best score 341 bits
Score difference with first non-orthologous sequence - G.intestinalis:143 P.knowlesi:231

A8BGA9              	100.00%		B3L6X8              	100.00%
                    	       		B3L263              	11.83%
                    	       		B3L2J4              	6.99%
                    	       		B3LCV7              	6.99%
Bootstrap support for A8BGA9 as seed ortholog is 99%.
Bootstrap support for B3L6X8 as seed ortholog is 100%.

Group of orthologs #88. Best score 338 bits
Score difference with first non-orthologous sequence - G.intestinalis:338 P.knowlesi:338

A8B3G7              	100.00%		B3L1F4              	100.00%
Bootstrap support for A8B3G7 as seed ortholog is 100%.
Bootstrap support for B3L1F4 as seed ortholog is 100%.

Group of orthologs #89. Best score 334 bits
Score difference with first non-orthologous sequence - G.intestinalis:334 P.knowlesi:334

A8BQI0              	100.00%		B3L5B4              	100.00%
Bootstrap support for A8BQI0 as seed ortholog is 100%.
Bootstrap support for B3L5B4 as seed ortholog is 100%.

Group of orthologs #90. Best score 333 bits
Score difference with first non-orthologous sequence - G.intestinalis:333 P.knowlesi:159

A8B9U8              	100.00%		B3L5Y2              	100.00%
Bootstrap support for A8B9U8 as seed ortholog is 100%.
Bootstrap support for B3L5Y2 as seed ortholog is 99%.

Group of orthologs #91. Best score 333 bits
Score difference with first non-orthologous sequence - G.intestinalis:333 P.knowlesi:67

A8BLX7              	100.00%		B3L776              	100.00%
Bootstrap support for A8BLX7 as seed ortholog is 100%.
Bootstrap support for B3L776 as seed ortholog is 91%.

Group of orthologs #92. Best score 333 bits
Score difference with first non-orthologous sequence - G.intestinalis:177 P.knowlesi:333

A8BV45              	100.00%		B3LBA7              	100.00%
Bootstrap support for A8BV45 as seed ortholog is 99%.
Bootstrap support for B3LBA7 as seed ortholog is 100%.

Group of orthologs #93. Best score 331 bits
Score difference with first non-orthologous sequence - G.intestinalis:20 P.knowlesi:120

A8B2A9              	100.00%		B3L755              	100.00%
Bootstrap support for A8B2A9 as seed ortholog is 74%.
Alternative seed ortholog is A8BZ95 (20 bits away from this cluster)
Bootstrap support for B3L755 as seed ortholog is 99%.

Group of orthologs #94. Best score 331 bits
Score difference with first non-orthologous sequence - G.intestinalis:331 P.knowlesi:331

A8B515              	100.00%		B3LCI5              	100.00%
Bootstrap support for A8B515 as seed ortholog is 100%.
Bootstrap support for B3LCI5 as seed ortholog is 100%.

Group of orthologs #95. Best score 331 bits
Score difference with first non-orthologous sequence - G.intestinalis:86 P.knowlesi:99

A8B7S5              	100.00%		B3LBY6              	100.00%
Bootstrap support for A8B7S5 as seed ortholog is 94%.
Bootstrap support for B3LBY6 as seed ortholog is 99%.

Group of orthologs #96. Best score 330 bits
Score difference with first non-orthologous sequence - G.intestinalis:36 P.knowlesi:2

A8BED3              	100.00%		B3L2S0              	100.00%
Bootstrap support for A8BED3 as seed ortholog is 85%.
Bootstrap support for B3L2S0 as seed ortholog is 53%.
Alternative seed ortholog is B3L2U9 (2 bits away from this cluster)

Group of orthologs #97. Best score 330 bits
Score difference with first non-orthologous sequence - G.intestinalis:330 P.knowlesi:270

A8BN33              	100.00%		B3L5B0              	100.00%
Bootstrap support for A8BN33 as seed ortholog is 100%.
Bootstrap support for B3L5B0 as seed ortholog is 100%.

Group of orthologs #98. Best score 326 bits
Score difference with first non-orthologous sequence - G.intestinalis:326 P.knowlesi:326

A8BXS3              	100.00%		B3L1W5              	100.00%
Bootstrap support for A8BXS3 as seed ortholog is 100%.
Bootstrap support for B3L1W5 as seed ortholog is 100%.

Group of orthologs #99. Best score 324 bits
Score difference with first non-orthologous sequence - G.intestinalis:324 P.knowlesi:324

A8BAB3              	100.00%		B3LBM5              	100.00%
Bootstrap support for A8BAB3 as seed ortholog is 100%.
Bootstrap support for B3LBM5 as seed ortholog is 100%.

Group of orthologs #100. Best score 321 bits
Score difference with first non-orthologous sequence - G.intestinalis:321 P.knowlesi:321

A8BGT6              	100.00%		B3LD69              	100.00%
Bootstrap support for A8BGT6 as seed ortholog is 100%.
Bootstrap support for B3LD69 as seed ortholog is 100%.

Group of orthologs #101. Best score 320 bits
Score difference with first non-orthologous sequence - G.intestinalis:320 P.knowlesi:320

A8B1R9              	100.00%		B3LA88              	100.00%
Bootstrap support for A8B1R9 as seed ortholog is 100%.
Bootstrap support for B3LA88 as seed ortholog is 100%.

Group of orthologs #102. Best score 318 bits
Score difference with first non-orthologous sequence - G.intestinalis:318 P.knowlesi:318

A8BZP3              	100.00%		B3KZH9              	100.00%
Bootstrap support for A8BZP3 as seed ortholog is 100%.
Bootstrap support for B3KZH9 as seed ortholog is 100%.

Group of orthologs #103. Best score 318 bits
Score difference with first non-orthologous sequence - G.intestinalis:318 P.knowlesi:318

E2RTN1              	100.00%		B3L3I5              	100.00%
Bootstrap support for E2RTN1 as seed ortholog is 100%.
Bootstrap support for B3L3I5 as seed ortholog is 100%.

Group of orthologs #104. Best score 317 bits
Score difference with first non-orthologous sequence - G.intestinalis:79 P.knowlesi:248

A8BGX7              	100.00%		B3L274              	100.00%
Bootstrap support for A8BGX7 as seed ortholog is 97%.
Bootstrap support for B3L274 as seed ortholog is 100%.

Group of orthologs #105. Best score 317 bits
Score difference with first non-orthologous sequence - G.intestinalis:317 P.knowlesi:317

A8B9Q3              	100.00%		B3LAT9              	100.00%
Bootstrap support for A8B9Q3 as seed ortholog is 100%.
Bootstrap support for B3LAT9 as seed ortholog is 100%.

Group of orthologs #106. Best score 316 bits
Score difference with first non-orthologous sequence - G.intestinalis:316 P.knowlesi:316

A8BAU7              	100.00%		B3L0L1              	100.00%
Bootstrap support for A8BAU7 as seed ortholog is 100%.
Bootstrap support for B3L0L1 as seed ortholog is 100%.

Group of orthologs #107. Best score 314 bits
Score difference with first non-orthologous sequence - G.intestinalis:314 P.knowlesi:206

A8B9S8              	100.00%		B3L538              	100.00%
Bootstrap support for A8B9S8 as seed ortholog is 100%.
Bootstrap support for B3L538 as seed ortholog is 99%.

Group of orthologs #108. Best score 314 bits
Score difference with first non-orthologous sequence - G.intestinalis:314 P.knowlesi:217

E2RTN4              	100.00%		B3L699              	100.00%
Bootstrap support for E2RTN4 as seed ortholog is 100%.
Bootstrap support for B3L699 as seed ortholog is 100%.

Group of orthologs #109. Best score 312 bits
Score difference with first non-orthologous sequence - G.intestinalis:312 P.knowlesi:312

E2RTS2              	100.00%		B3L3U9              	100.00%
                    	       		B3LCW4              	6.82%
Bootstrap support for E2RTS2 as seed ortholog is 100%.
Bootstrap support for B3L3U9 as seed ortholog is 100%.

Group of orthologs #110. Best score 310 bits
Score difference with first non-orthologous sequence - G.intestinalis:310 P.knowlesi:310

A8B8T6              	100.00%		B3KZ23              	100.00%
Bootstrap support for A8B8T6 as seed ortholog is 100%.
Bootstrap support for B3KZ23 as seed ortholog is 100%.

Group of orthologs #111. Best score 308 bits
Score difference with first non-orthologous sequence - G.intestinalis:308 P.knowlesi:308

A8BQQ6              	100.00%		B3L878              	100.00%
Bootstrap support for A8BQQ6 as seed ortholog is 100%.
Bootstrap support for B3L878 as seed ortholog is 100%.

Group of orthologs #112. Best score 304 bits
Score difference with first non-orthologous sequence - G.intestinalis:304 P.knowlesi:304

A8BXX3              	100.00%		B3L7B6              	100.00%
Bootstrap support for A8BXX3 as seed ortholog is 100%.
Bootstrap support for B3L7B6 as seed ortholog is 100%.

Group of orthologs #113. Best score 304 bits
Score difference with first non-orthologous sequence - G.intestinalis:304 P.knowlesi:304

A8BWM8              	100.00%		B3L9M2              	100.00%
Bootstrap support for A8BWM8 as seed ortholog is 100%.
Bootstrap support for B3L9M2 as seed ortholog is 100%.

Group of orthologs #114. Best score 300 bits
Score difference with first non-orthologous sequence - G.intestinalis:48 P.knowlesi:300

A8BN52              	100.00%		B3LBA5              	100.00%
Bootstrap support for A8BN52 as seed ortholog is 84%.
Bootstrap support for B3LBA5 as seed ortholog is 100%.

Group of orthologs #115. Best score 298 bits
Score difference with first non-orthologous sequence - G.intestinalis:298 P.knowlesi:298

A8B4T1              	100.00%		B3LAN9              	100.00%
Bootstrap support for A8B4T1 as seed ortholog is 100%.
Bootstrap support for B3LAN9 as seed ortholog is 100%.

Group of orthologs #116. Best score 297 bits
Score difference with first non-orthologous sequence - G.intestinalis:297 P.knowlesi:297

A8BBN0              	100.00%		B3L3M4              	100.00%
Bootstrap support for A8BBN0 as seed ortholog is 100%.
Bootstrap support for B3L3M4 as seed ortholog is 100%.

Group of orthologs #117. Best score 295 bits
Score difference with first non-orthologous sequence - G.intestinalis:295 P.knowlesi:295

A8BGB4              	100.00%		B3KZ79              	100.00%
Bootstrap support for A8BGB4 as seed ortholog is 100%.
Bootstrap support for B3KZ79 as seed ortholog is 100%.

Group of orthologs #118. Best score 295 bits
Score difference with first non-orthologous sequence - G.intestinalis:91 P.knowlesi:147

A8BG41              	100.00%		B3L3Z3              	100.00%
Bootstrap support for A8BG41 as seed ortholog is 99%.
Bootstrap support for B3L3Z3 as seed ortholog is 99%.

Group of orthologs #119. Best score 294 bits
Score difference with first non-orthologous sequence - G.intestinalis:294 P.knowlesi:294

A8BK58              	100.00%		B3LCL1              	100.00%
                    	       		B3L9X8              	9.82%
Bootstrap support for A8BK58 as seed ortholog is 100%.
Bootstrap support for B3LCL1 as seed ortholog is 100%.

Group of orthologs #120. Best score 292 bits
Score difference with first non-orthologous sequence - G.intestinalis:292 P.knowlesi:292

E2RTX1              	100.00%		B3L3U5              	100.00%
Bootstrap support for E2RTX1 as seed ortholog is 100%.
Bootstrap support for B3L3U5 as seed ortholog is 100%.

Group of orthologs #121. Best score 290 bits
Score difference with first non-orthologous sequence - G.intestinalis:290 P.knowlesi:290

A8BDD4              	100.00%		B3L268              	100.00%
Bootstrap support for A8BDD4 as seed ortholog is 100%.
Bootstrap support for B3L268 as seed ortholog is 100%.

Group of orthologs #122. Best score 289 bits
Score difference with first non-orthologous sequence - G.intestinalis:289 P.knowlesi:289

A8BND8              	100.00%		B3KZ67              	100.00%
Bootstrap support for A8BND8 as seed ortholog is 100%.
Bootstrap support for B3KZ67 as seed ortholog is 100%.

Group of orthologs #123. Best score 289 bits
Score difference with first non-orthologous sequence - G.intestinalis:289 P.knowlesi:289

A8B8N3              	100.00%		B3L8M2              	100.00%
Bootstrap support for A8B8N3 as seed ortholog is 100%.
Bootstrap support for B3L8M2 as seed ortholog is 100%.

Group of orthologs #124. Best score 288 bits
Score difference with first non-orthologous sequence - G.intestinalis:127 P.knowlesi:108

A8B7Q4              	100.00%		B3L472              	100.00%
Bootstrap support for A8B7Q4 as seed ortholog is 99%.
Bootstrap support for B3L472 as seed ortholog is 99%.

Group of orthologs #125. Best score 288 bits
Score difference with first non-orthologous sequence - G.intestinalis:288 P.knowlesi:288

A8BWV4              	100.00%		B3LBK2              	100.00%
Bootstrap support for A8BWV4 as seed ortholog is 100%.
Bootstrap support for B3LBK2 as seed ortholog is 100%.

Group of orthologs #126. Best score 282 bits
Score difference with first non-orthologous sequence - G.intestinalis:89 P.knowlesi:86

A8B9M9              	100.00%		B3L611              	100.00%
A8BND4              	31.53%		
Bootstrap support for A8B9M9 as seed ortholog is 95%.
Bootstrap support for B3L611 as seed ortholog is 96%.

Group of orthologs #127. Best score 282 bits
Score difference with first non-orthologous sequence - G.intestinalis:139 P.knowlesi:167

A8BHT3              	100.00%		B3L4N6              	100.00%
Bootstrap support for A8BHT3 as seed ortholog is 99%.
Bootstrap support for B3L4N6 as seed ortholog is 99%.

Group of orthologs #128. Best score 280 bits
Score difference with first non-orthologous sequence - G.intestinalis:280 P.knowlesi:280

A8BMI7              	100.00%		B3L2D7              	100.00%
Bootstrap support for A8BMI7 as seed ortholog is 100%.
Bootstrap support for B3L2D7 as seed ortholog is 100%.

Group of orthologs #129. Best score 279 bits
Score difference with first non-orthologous sequence - G.intestinalis:279 P.knowlesi:72

A8BH36              	100.00%		B3L436              	100.00%
Bootstrap support for A8BH36 as seed ortholog is 100%.
Bootstrap support for B3L436 as seed ortholog is 66%.
Alternative seed ortholog is B3KZG3 (72 bits away from this cluster)

Group of orthologs #130. Best score 279 bits
Score difference with first non-orthologous sequence - G.intestinalis:279 P.knowlesi:279

A8B612              	100.00%		B3LAE9              	100.00%
Bootstrap support for A8B612 as seed ortholog is 100%.
Bootstrap support for B3LAE9 as seed ortholog is 100%.

Group of orthologs #131. Best score 279 bits
Score difference with first non-orthologous sequence - G.intestinalis:33 P.knowlesi:279

A8BNN6              	100.00%		B3L5Z1              	100.00%
Bootstrap support for A8BNN6 as seed ortholog is 90%.
Bootstrap support for B3L5Z1 as seed ortholog is 100%.

Group of orthologs #132. Best score 279 bits
Score difference with first non-orthologous sequence - G.intestinalis:279 P.knowlesi:279

A8BM86              	100.00%		B3LAL7              	100.00%
Bootstrap support for A8BM86 as seed ortholog is 100%.
Bootstrap support for B3LAL7 as seed ortholog is 100%.

Group of orthologs #133. Best score 279 bits
Score difference with first non-orthologous sequence - G.intestinalis:279 P.knowlesi:279

E2RU47              	100.00%		B3LAE0              	100.00%
Bootstrap support for E2RU47 as seed ortholog is 100%.
Bootstrap support for B3LAE0 as seed ortholog is 100%.

Group of orthologs #134. Best score 275 bits
Score difference with first non-orthologous sequence - G.intestinalis:64 P.knowlesi:275

A8B577              	100.00%		B3L8C2              	100.00%
Bootstrap support for A8B577 as seed ortholog is 84%.
Bootstrap support for B3L8C2 as seed ortholog is 100%.

Group of orthologs #135. Best score 275 bits
Score difference with first non-orthologous sequence - G.intestinalis:275 P.knowlesi:275

A8BFE3              	100.00%		B3L4K6              	100.00%
Bootstrap support for A8BFE3 as seed ortholog is 100%.
Bootstrap support for B3L4K6 as seed ortholog is 100%.

Group of orthologs #136. Best score 275 bits
Score difference with first non-orthologous sequence - G.intestinalis:147 P.knowlesi:118

A8BQW1              	100.00%		B3LCA3              	100.00%
Bootstrap support for A8BQW1 as seed ortholog is 99%.
Bootstrap support for B3LCA3 as seed ortholog is 98%.

Group of orthologs #137. Best score 274 bits
Score difference with first non-orthologous sequence - G.intestinalis:274 P.knowlesi:274

A8B4M5              	100.00%		B3L6F2              	100.00%
Bootstrap support for A8B4M5 as seed ortholog is 100%.
Bootstrap support for B3L6F2 as seed ortholog is 100%.

Group of orthologs #138. Best score 273 bits
Score difference with first non-orthologous sequence - G.intestinalis:273 P.knowlesi:273

A8BE70              	100.00%		B3L520              	100.00%
Bootstrap support for A8BE70 as seed ortholog is 100%.
Bootstrap support for B3L520 as seed ortholog is 100%.

Group of orthologs #139. Best score 272 bits
Score difference with first non-orthologous sequence - G.intestinalis:272 P.knowlesi:272

A8B672              	100.00%		B3L014              	100.00%
Bootstrap support for A8B672 as seed ortholog is 100%.
Bootstrap support for B3L014 as seed ortholog is 100%.

Group of orthologs #140. Best score 271 bits
Score difference with first non-orthologous sequence - G.intestinalis:271 P.knowlesi:154

A8BJJ1              	100.00%		B3KZ01              	100.00%
Bootstrap support for A8BJJ1 as seed ortholog is 100%.
Bootstrap support for B3KZ01 as seed ortholog is 96%.

Group of orthologs #141. Best score 271 bits
Score difference with first non-orthologous sequence - G.intestinalis:271 P.knowlesi:271

A8BBN3              	100.00%		B3L783              	100.00%
Bootstrap support for A8BBN3 as seed ortholog is 100%.
Bootstrap support for B3L783 as seed ortholog is 100%.

Group of orthologs #142. Best score 270 bits
Score difference with first non-orthologous sequence - G.intestinalis:45 P.knowlesi:93

A8B7Q7              	100.00%		B3L0G9              	100.00%
Bootstrap support for A8B7Q7 as seed ortholog is 85%.
Bootstrap support for B3L0G9 as seed ortholog is 98%.

Group of orthologs #143. Best score 265 bits
Score difference with first non-orthologous sequence - G.intestinalis:68 P.knowlesi:265

A8BUC0              	100.00%		B3L9J0              	100.00%
E2RU40              	27.27%		
Bootstrap support for A8BUC0 as seed ortholog is 93%.
Bootstrap support for B3L9J0 as seed ortholog is 100%.

Group of orthologs #144. Best score 265 bits
Score difference with first non-orthologous sequence - G.intestinalis:107 P.knowlesi:138

A8B495              	100.00%		B3LAT1              	100.00%
Bootstrap support for A8B495 as seed ortholog is 97%.
Bootstrap support for B3LAT1 as seed ortholog is 96%.

Group of orthologs #145. Best score 265 bits
Score difference with first non-orthologous sequence - G.intestinalis:118 P.knowlesi:82

A8BSW7              	100.00%		B3L1W8              	100.00%
Bootstrap support for A8BSW7 as seed ortholog is 100%.
Bootstrap support for B3L1W8 as seed ortholog is 99%.

Group of orthologs #146. Best score 263 bits
Score difference with first non-orthologous sequence - G.intestinalis:263 P.knowlesi:263

A8B7H8              	100.00%		B3L6J8              	100.00%
Bootstrap support for A8B7H8 as seed ortholog is 100%.
Bootstrap support for B3L6J8 as seed ortholog is 100%.

Group of orthologs #147. Best score 263 bits
Score difference with first non-orthologous sequence - G.intestinalis:263 P.knowlesi:263

A8B8Z3              	100.00%		B3L8Q5              	100.00%
Bootstrap support for A8B8Z3 as seed ortholog is 100%.
Bootstrap support for B3L8Q5 as seed ortholog is 100%.

Group of orthologs #148. Best score 263 bits
Score difference with first non-orthologous sequence - G.intestinalis:164 P.knowlesi:67

A8BNK1              	100.00%		B3LA33              	100.00%
Bootstrap support for A8BNK1 as seed ortholog is 99%.
Bootstrap support for B3LA33 as seed ortholog is 89%.

Group of orthologs #149. Best score 262 bits
Score difference with first non-orthologous sequence - G.intestinalis:262 P.knowlesi:262

A8B8Z6              	100.00%		B3L1H7              	100.00%
Bootstrap support for A8B8Z6 as seed ortholog is 100%.
Bootstrap support for B3L1H7 as seed ortholog is 100%.

Group of orthologs #150. Best score 260 bits
Score difference with first non-orthologous sequence - G.intestinalis:114 P.knowlesi:90

E2RTU0              	100.00%		B3L4U0              	100.00%
Bootstrap support for E2RTU0 as seed ortholog is 99%.
Bootstrap support for B3L4U0 as seed ortholog is 97%.

Group of orthologs #151. Best score 259 bits
Score difference with first non-orthologous sequence - G.intestinalis:259 P.knowlesi:259

A8BZ27              	100.00%		B3L4J2              	100.00%
Bootstrap support for A8BZ27 as seed ortholog is 100%.
Bootstrap support for B3L4J2 as seed ortholog is 100%.

Group of orthologs #152. Best score 257 bits
Score difference with first non-orthologous sequence - G.intestinalis:257 P.knowlesi:257

A8B5J6              	100.00%		B3L6V4              	100.00%
Bootstrap support for A8B5J6 as seed ortholog is 100%.
Bootstrap support for B3L6V4 as seed ortholog is 100%.

Group of orthologs #153. Best score 254 bits
Score difference with first non-orthologous sequence - G.intestinalis:254 P.knowlesi:254

E2RU18              	100.00%		B3L3R5              	100.00%
A8BC13              	5.22%		
Bootstrap support for E2RU18 as seed ortholog is 100%.
Bootstrap support for B3L3R5 as seed ortholog is 100%.

Group of orthologs #154. Best score 253 bits
Score difference with first non-orthologous sequence - G.intestinalis:253 P.knowlesi:253

A8BLX3              	100.00%		B3LA52              	100.00%
Bootstrap support for A8BLX3 as seed ortholog is 100%.
Bootstrap support for B3LA52 as seed ortholog is 100%.

Group of orthologs #155. Best score 249 bits
Score difference with first non-orthologous sequence - G.intestinalis:106 P.knowlesi:94

A8BS28              	100.00%		B3L0Q5              	100.00%
Bootstrap support for A8BS28 as seed ortholog is 98%.
Bootstrap support for B3L0Q5 as seed ortholog is 98%.

Group of orthologs #156. Best score 248 bits
Score difference with first non-orthologous sequence - G.intestinalis:187 P.knowlesi:88

E2RU85              	100.00%		B3KZK4              	100.00%
Bootstrap support for E2RU85 as seed ortholog is 100%.
Bootstrap support for B3KZK4 as seed ortholog is 100%.

Group of orthologs #157. Best score 244 bits
Score difference with first non-orthologous sequence - G.intestinalis:244 P.knowlesi:244

A8BQ59              	100.00%		B3L1M7              	100.00%
Bootstrap support for A8BQ59 as seed ortholog is 100%.
Bootstrap support for B3L1M7 as seed ortholog is 100%.

Group of orthologs #158. Best score 241 bits
Score difference with first non-orthologous sequence - G.intestinalis:241 P.knowlesi:78

A8BW19              	100.00%		B3L067              	100.00%
Bootstrap support for A8BW19 as seed ortholog is 100%.
Bootstrap support for B3L067 as seed ortholog is 94%.

Group of orthologs #159. Best score 241 bits
Score difference with first non-orthologous sequence - G.intestinalis:3 P.knowlesi:147

E2RTP0              	100.00%		B3L322              	100.00%
Bootstrap support for E2RTP0 as seed ortholog is 51%.
Alternative seed ortholog is E2RTR4 (3 bits away from this cluster)
Bootstrap support for B3L322 as seed ortholog is 99%.

Group of orthologs #160. Best score 238 bits
Score difference with first non-orthologous sequence - G.intestinalis:238 P.knowlesi:238

A8BMZ1              	100.00%		B3L9U8              	100.00%
Bootstrap support for A8BMZ1 as seed ortholog is 100%.
Bootstrap support for B3L9U8 as seed ortholog is 100%.

Group of orthologs #161. Best score 236 bits
Score difference with first non-orthologous sequence - G.intestinalis:236 P.knowlesi:236

A8BK61              	100.00%		B3L4Y8              	100.00%
Bootstrap support for A8BK61 as seed ortholog is 100%.
Bootstrap support for B3L4Y8 as seed ortholog is 100%.

Group of orthologs #162. Best score 235 bits
Score difference with first non-orthologous sequence - G.intestinalis:235 P.knowlesi:235

A8BBX8              	100.00%		B3L729              	100.00%
Bootstrap support for A8BBX8 as seed ortholog is 100%.
Bootstrap support for B3L729 as seed ortholog is 100%.

Group of orthologs #163. Best score 234 bits
Score difference with first non-orthologous sequence - G.intestinalis:234 P.knowlesi:38

A8B498              	100.00%		B3L2D1              	100.00%
Bootstrap support for A8B498 as seed ortholog is 100%.
Bootstrap support for B3L2D1 as seed ortholog is 75%.

Group of orthologs #164. Best score 231 bits
Score difference with first non-orthologous sequence - G.intestinalis:231 P.knowlesi:137

A8BYS3              	100.00%		B3L315              	100.00%
Bootstrap support for A8BYS3 as seed ortholog is 100%.
Bootstrap support for B3L315 as seed ortholog is 99%.

Group of orthologs #165. Best score 230 bits
Score difference with first non-orthologous sequence - G.intestinalis:46 P.knowlesi:92

A8BFG8              	100.00%		B3L0M2              	100.00%
                    	       		B3LA59              	46.12%
                    	       		B3KZU8              	18.49%
Bootstrap support for A8BFG8 as seed ortholog is 92%.
Bootstrap support for B3L0M2 as seed ortholog is 99%.

Group of orthologs #166. Best score 229 bits
Score difference with first non-orthologous sequence - G.intestinalis:229 P.knowlesi:167

A8BR89              	100.00%		B3LCD4              	100.00%
Bootstrap support for A8BR89 as seed ortholog is 100%.
Bootstrap support for B3LCD4 as seed ortholog is 99%.

Group of orthologs #167. Best score 228 bits
Score difference with first non-orthologous sequence - G.intestinalis:48 P.knowlesi:84

A8BS29              	100.00%		B3L5Y4              	100.00%
                    	       		B3L9V8              	100.00%
                    	       		B3L682              	5.32%
Bootstrap support for A8BS29 as seed ortholog is 87%.
Bootstrap support for B3L5Y4 as seed ortholog is 98%.
Bootstrap support for B3L9V8 as seed ortholog is 98%.

Group of orthologs #168. Best score 228 bits
Score difference with first non-orthologous sequence - G.intestinalis:33 P.knowlesi:74

E2RU17              	100.00%		B3LCV2              	100.00%
Bootstrap support for E2RU17 as seed ortholog is 90%.
Bootstrap support for B3LCV2 as seed ortholog is 99%.

Group of orthologs #169. Best score 226 bits
Score difference with first non-orthologous sequence - G.intestinalis:226 P.knowlesi:226

A8B734              	100.00%		B3LCR8              	100.00%
Bootstrap support for A8B734 as seed ortholog is 100%.
Bootstrap support for B3LCR8 as seed ortholog is 100%.

Group of orthologs #170. Best score 225 bits
Score difference with first non-orthologous sequence - G.intestinalis:225 P.knowlesi:225

A8BPF2              	100.00%		B3LBE8              	100.00%
Bootstrap support for A8BPF2 as seed ortholog is 100%.
Bootstrap support for B3LBE8 as seed ortholog is 100%.

Group of orthologs #171. Best score 222 bits
Score difference with first non-orthologous sequence - G.intestinalis:222 P.knowlesi:222

A8BSU4              	100.00%		B3L640              	100.00%
Bootstrap support for A8BSU4 as seed ortholog is 100%.
Bootstrap support for B3L640 as seed ortholog is 100%.

Group of orthologs #172. Best score 221 bits
Score difference with first non-orthologous sequence - G.intestinalis:221 P.knowlesi:221

A8BI95              	100.00%		B3L086              	100.00%
Bootstrap support for A8BI95 as seed ortholog is 100%.
Bootstrap support for B3L086 as seed ortholog is 100%.

Group of orthologs #173. Best score 221 bits
Score difference with first non-orthologous sequence - G.intestinalis:221 P.knowlesi:221

A8BNT0              	100.00%		B3L5A9              	100.00%
Bootstrap support for A8BNT0 as seed ortholog is 100%.
Bootstrap support for B3L5A9 as seed ortholog is 100%.

Group of orthologs #174. Best score 218 bits
Score difference with first non-orthologous sequence - G.intestinalis:218 P.knowlesi:218

A8BZD3              	100.00%		B3L0A6              	100.00%
Bootstrap support for A8BZD3 as seed ortholog is 100%.
Bootstrap support for B3L0A6 as seed ortholog is 100%.

Group of orthologs #175. Best score 218 bits
Score difference with first non-orthologous sequence - G.intestinalis:218 P.knowlesi:218

A8BNK5              	100.00%		B3L7I7              	100.00%
Bootstrap support for A8BNK5 as seed ortholog is 100%.
Bootstrap support for B3L7I7 as seed ortholog is 100%.

Group of orthologs #176. Best score 217 bits
Score difference with first non-orthologous sequence - G.intestinalis:217 P.knowlesi:217

A8BY75              	100.00%		B3L3I0              	100.00%
Bootstrap support for A8BY75 as seed ortholog is 100%.
Bootstrap support for B3L3I0 as seed ortholog is 100%.

Group of orthologs #177. Best score 216 bits
Score difference with first non-orthologous sequence - G.intestinalis:216 P.knowlesi:216

A8BX22              	100.00%		B3LBF1              	100.00%
Bootstrap support for A8BX22 as seed ortholog is 100%.
Bootstrap support for B3LBF1 as seed ortholog is 100%.

Group of orthologs #178. Best score 214 bits
Score difference with first non-orthologous sequence - G.intestinalis:214 P.knowlesi:100

A8B636              	100.00%		B3L5A2              	100.00%
Bootstrap support for A8B636 as seed ortholog is 100%.
Bootstrap support for B3L5A2 as seed ortholog is 99%.

Group of orthologs #179. Best score 213 bits
Score difference with first non-orthologous sequence - G.intestinalis:213 P.knowlesi:213

A8B3G9              	100.00%		B3L1G8              	100.00%
Bootstrap support for A8B3G9 as seed ortholog is 100%.
Bootstrap support for B3L1G8 as seed ortholog is 100%.

Group of orthologs #180. Best score 213 bits
Score difference with first non-orthologous sequence - G.intestinalis:213 P.knowlesi:74

E2RU52              	100.00%		B3L8Y4              	100.00%
Bootstrap support for E2RU52 as seed ortholog is 100%.
Bootstrap support for B3L8Y4 as seed ortholog is 99%.

Group of orthologs #181. Best score 210 bits
Score difference with first non-orthologous sequence - G.intestinalis:210 P.knowlesi:210

A8BM32              	100.00%		B3L0S1              	100.00%
Bootstrap support for A8BM32 as seed ortholog is 100%.
Bootstrap support for B3L0S1 as seed ortholog is 100%.

Group of orthologs #182. Best score 210 bits
Score difference with first non-orthologous sequence - G.intestinalis:87 P.knowlesi:52

E2RTN5              	100.00%		B3LBS6              	100.00%
Bootstrap support for E2RTN5 as seed ortholog is 97%.
Bootstrap support for B3LBS6 as seed ortholog is 87%.

Group of orthologs #183. Best score 209 bits
Score difference with first non-orthologous sequence - G.intestinalis:209 P.knowlesi:209

A8B787              	100.00%		B3L7E0              	100.00%
Bootstrap support for A8B787 as seed ortholog is 100%.
Bootstrap support for B3L7E0 as seed ortholog is 100%.

Group of orthologs #184. Best score 209 bits
Score difference with first non-orthologous sequence - G.intestinalis:209 P.knowlesi:209

A8BCK3              	100.00%		B3L7E2              	100.00%
Bootstrap support for A8BCK3 as seed ortholog is 100%.
Bootstrap support for B3L7E2 as seed ortholog is 100%.

Group of orthologs #185. Best score 209 bits
Score difference with first non-orthologous sequence - G.intestinalis:133 P.knowlesi:110

E2RTT2              	100.00%		B3LBF2              	100.00%
Bootstrap support for E2RTT2 as seed ortholog is 100%.
Bootstrap support for B3LBF2 as seed ortholog is 100%.

Group of orthologs #186. Best score 208 bits
Score difference with first non-orthologous sequence - G.intestinalis:208 P.knowlesi:208

A8BRC3              	100.00%		B3L1L0              	100.00%
                    	       		B3L992              	99.78%
Bootstrap support for A8BRC3 as seed ortholog is 100%.
Bootstrap support for B3L1L0 as seed ortholog is 100%.

Group of orthologs #187. Best score 208 bits
Score difference with first non-orthologous sequence - G.intestinalis:148 P.knowlesi:70

A8BQU2              	100.00%		B3L239              	100.00%
Bootstrap support for A8BQU2 as seed ortholog is 100%.
Bootstrap support for B3L239 as seed ortholog is 99%.

Group of orthologs #188. Best score 208 bits
Score difference with first non-orthologous sequence - G.intestinalis:95 P.knowlesi:132

E2RTW7              	100.00%		B3L787              	100.00%
Bootstrap support for E2RTW7 as seed ortholog is 99%.
Bootstrap support for B3L787 as seed ortholog is 100%.

Group of orthologs #189. Best score 207 bits
Score difference with first non-orthologous sequence - G.intestinalis:84 P.knowlesi:207

A8BAJ1              	100.00%		B3L2K3              	100.00%
Bootstrap support for A8BAJ1 as seed ortholog is 99%.
Bootstrap support for B3L2K3 as seed ortholog is 100%.

Group of orthologs #190. Best score 207 bits
Score difference with first non-orthologous sequence - G.intestinalis:207 P.knowlesi:56

A8B576              	100.00%		B3L6C5              	100.00%
Bootstrap support for A8B576 as seed ortholog is 100%.
Bootstrap support for B3L6C5 as seed ortholog is 87%.

Group of orthologs #191. Best score 207 bits
Score difference with first non-orthologous sequence - G.intestinalis:207 P.knowlesi:207

A8BE86              	100.00%		B3L230              	100.00%
Bootstrap support for A8BE86 as seed ortholog is 100%.
Bootstrap support for B3L230 as seed ortholog is 100%.

Group of orthologs #192. Best score 205 bits
Score difference with first non-orthologous sequence - G.intestinalis:55 P.knowlesi:47

E2RTZ2              	100.00%		B3L6D9              	100.00%
                    	       		B3L6C7              	6.12%
Bootstrap support for E2RTZ2 as seed ortholog is 98%.
Bootstrap support for B3L6D9 as seed ortholog is 94%.

Group of orthologs #193. Best score 205 bits
Score difference with first non-orthologous sequence - G.intestinalis:205 P.knowlesi:205

E2RTZ5              	100.00%		B3L4Y9              	100.00%
Bootstrap support for E2RTZ5 as seed ortholog is 100%.
Bootstrap support for B3L4Y9 as seed ortholog is 100%.

Group of orthologs #194. Best score 205 bits
Score difference with first non-orthologous sequence - G.intestinalis:205 P.knowlesi:205

A8BWM5              	100.00%		B3L9N1              	100.00%
Bootstrap support for A8BWM5 as seed ortholog is 100%.
Bootstrap support for B3L9N1 as seed ortholog is 100%.

Group of orthologs #195. Best score 204 bits
Score difference with first non-orthologous sequence - G.intestinalis:126 P.knowlesi:107

A8BS62              	100.00%		B3L4Y0              	100.00%
Bootstrap support for A8BS62 as seed ortholog is 100%.
Bootstrap support for B3L4Y0 as seed ortholog is 99%.

Group of orthologs #196. Best score 204 bits
Score difference with first non-orthologous sequence - G.intestinalis:16 P.knowlesi:46

A8BQU9              	100.00%		B3LBB4              	100.00%
Bootstrap support for A8BQU9 as seed ortholog is 66%.
Alternative seed ortholog is A8B8J9 (16 bits away from this cluster)
Bootstrap support for B3LBB4 as seed ortholog is 87%.

Group of orthologs #197. Best score 201 bits
Score difference with first non-orthologous sequence - G.intestinalis:201 P.knowlesi:201

A8B9W5              	100.00%		B3LCV0              	100.00%
Bootstrap support for A8B9W5 as seed ortholog is 100%.
Bootstrap support for B3LCV0 as seed ortholog is 100%.

Group of orthologs #198. Best score 201 bits
Score difference with first non-orthologous sequence - G.intestinalis:75 P.knowlesi:63

A8BP57              	100.00%		B3LB25              	100.00%
Bootstrap support for A8BP57 as seed ortholog is 99%.
Bootstrap support for B3LB25 as seed ortholog is 99%.

Group of orthologs #199. Best score 201 bits
Score difference with first non-orthologous sequence - G.intestinalis:201 P.knowlesi:201

A8BS78              	100.00%		B3L9T7              	100.00%
Bootstrap support for A8BS78 as seed ortholog is 100%.
Bootstrap support for B3L9T7 as seed ortholog is 100%.

Group of orthologs #200. Best score 200 bits
Score difference with first non-orthologous sequence - G.intestinalis:200 P.knowlesi:200

A8B4B6              	100.00%		B3LB03              	100.00%
Bootstrap support for A8B4B6 as seed ortholog is 100%.
Bootstrap support for B3LB03 as seed ortholog is 100%.

Group of orthologs #201. Best score 200 bits
Score difference with first non-orthologous sequence - G.intestinalis:200 P.knowlesi:200

A8BXW1              	100.00%		B3LAK2              	100.00%
Bootstrap support for A8BXW1 as seed ortholog is 100%.
Bootstrap support for B3LAK2 as seed ortholog is 100%.

Group of orthologs #202. Best score 196 bits
Score difference with first non-orthologous sequence - G.intestinalis:196 P.knowlesi:196

E2RTP5              	100.00%		B3KZ15              	100.00%
                    	       		B3LAB7              	31.30%
Bootstrap support for E2RTP5 as seed ortholog is 100%.
Bootstrap support for B3KZ15 as seed ortholog is 100%.

Group of orthologs #203. Best score 196 bits
Score difference with first non-orthologous sequence - G.intestinalis:196 P.knowlesi:196

A8B3E2              	100.00%		B3L9C8              	100.00%
Bootstrap support for A8B3E2 as seed ortholog is 100%.
Bootstrap support for B3L9C8 as seed ortholog is 100%.

Group of orthologs #204. Best score 195 bits
Score difference with first non-orthologous sequence - G.intestinalis:41 P.knowlesi:46

A8BDS5              	100.00%		B3L0A3              	100.00%
Bootstrap support for A8BDS5 as seed ortholog is 87%.
Bootstrap support for B3L0A3 as seed ortholog is 83%.

Group of orthologs #205. Best score 195 bits
Score difference with first non-orthologous sequence - G.intestinalis:195 P.knowlesi:85

A8BIF2              	100.00%		B3LA18              	100.00%
Bootstrap support for A8BIF2 as seed ortholog is 100%.
Bootstrap support for B3LA18 as seed ortholog is 99%.

Group of orthologs #206. Best score 193 bits
Score difference with first non-orthologous sequence - G.intestinalis:193 P.knowlesi:193

A8BBC9              	100.00%		B3L3C0              	100.00%
A8BBD4              	27.47%		
Bootstrap support for A8BBC9 as seed ortholog is 100%.
Bootstrap support for B3L3C0 as seed ortholog is 100%.

Group of orthologs #207. Best score 193 bits
Score difference with first non-orthologous sequence - G.intestinalis:193 P.knowlesi:193

E2RU33              	100.00%		B3LA05              	100.00%
Bootstrap support for E2RU33 as seed ortholog is 100%.
Bootstrap support for B3LA05 as seed ortholog is 100%.

Group of orthologs #208. Best score 191 bits
Score difference with first non-orthologous sequence - G.intestinalis:191 P.knowlesi:191

A8BNL1              	100.00%		B3L739              	100.00%
Bootstrap support for A8BNL1 as seed ortholog is 100%.
Bootstrap support for B3L739 as seed ortholog is 100%.

Group of orthologs #209. Best score 191 bits
Score difference with first non-orthologous sequence - G.intestinalis:100 P.knowlesi:96

A8BSF1              	100.00%		B3L786              	100.00%
Bootstrap support for A8BSF1 as seed ortholog is 99%.
Bootstrap support for B3L786 as seed ortholog is 99%.

Group of orthologs #210. Best score 191 bits
Score difference with first non-orthologous sequence - G.intestinalis:191 P.knowlesi:191

A8BZ78              	100.00%		B3L7M5              	100.00%
Bootstrap support for A8BZ78 as seed ortholog is 100%.
Bootstrap support for B3L7M5 as seed ortholog is 100%.

Group of orthologs #211. Best score 190 bits
Score difference with first non-orthologous sequence - G.intestinalis:190 P.knowlesi:190

A8B6L8              	100.00%		B3L8H9              	100.00%
Bootstrap support for A8B6L8 as seed ortholog is 100%.
Bootstrap support for B3L8H9 as seed ortholog is 100%.

Group of orthologs #212. Best score 189 bits
Score difference with first non-orthologous sequence - G.intestinalis:189 P.knowlesi:189

A8BVU0              	100.00%		B3L435              	100.00%
Bootstrap support for A8BVU0 as seed ortholog is 100%.
Bootstrap support for B3L435 as seed ortholog is 100%.

Group of orthologs #213. Best score 188 bits
Score difference with first non-orthologous sequence - G.intestinalis:188 P.knowlesi:188

A8BS58              	100.00%		B3LA78              	100.00%
Bootstrap support for A8BS58 as seed ortholog is 100%.
Bootstrap support for B3LA78 as seed ortholog is 100%.

Group of orthologs #214. Best score 187 bits
Score difference with first non-orthologous sequence - G.intestinalis:187 P.knowlesi:187

A8B3T0              	100.00%		B3LCT1              	100.00%
A8B476              	31.14%		
A8BM10              	17.71%		
A8BN72              	14.09%		
Bootstrap support for A8B3T0 as seed ortholog is 100%.
Bootstrap support for B3LCT1 as seed ortholog is 100%.

Group of orthologs #215. Best score 187 bits
Score difference with first non-orthologous sequence - G.intestinalis:187 P.knowlesi:107

A8BKE6              	100.00%		B3LCG6              	100.00%
Bootstrap support for A8BKE6 as seed ortholog is 100%.
Bootstrap support for B3LCG6 as seed ortholog is 98%.

Group of orthologs #216. Best score 187 bits
Score difference with first non-orthologous sequence - G.intestinalis:25 P.knowlesi:48

E2RU48              	100.00%		B3LC19              	100.00%
Bootstrap support for E2RU48 as seed ortholog is 79%.
Bootstrap support for B3LC19 as seed ortholog is 95%.

Group of orthologs #217. Best score 186 bits
Score difference with first non-orthologous sequence - G.intestinalis:186 P.knowlesi:16

A8BC67              	100.00%		B3L4V7              	100.00%
Bootstrap support for A8BC67 as seed ortholog is 100%.
Bootstrap support for B3L4V7 as seed ortholog is 71%.
Alternative seed ortholog is B3KZA2 (16 bits away from this cluster)

Group of orthologs #218. Best score 186 bits
Score difference with first non-orthologous sequence - G.intestinalis:186 P.knowlesi:186

A8BKS8              	100.00%		B3L665              	100.00%
Bootstrap support for A8BKS8 as seed ortholog is 100%.
Bootstrap support for B3L665 as seed ortholog is 100%.

Group of orthologs #219. Best score 185 bits
Score difference with first non-orthologous sequence - G.intestinalis:185 P.knowlesi:185

A8BBR2              	100.00%		B3L0H3              	100.00%
Bootstrap support for A8BBR2 as seed ortholog is 100%.
Bootstrap support for B3L0H3 as seed ortholog is 100%.

Group of orthologs #220. Best score 184 bits
Score difference with first non-orthologous sequence - G.intestinalis:184 P.knowlesi:184

A8BN51              	100.00%		B3L0U2              	100.00%
Bootstrap support for A8BN51 as seed ortholog is 100%.
Bootstrap support for B3L0U2 as seed ortholog is 100%.

Group of orthologs #221. Best score 184 bits
Score difference with first non-orthologous sequence - G.intestinalis:184 P.knowlesi:184

A8BS96              	100.00%		B3L4C7              	100.00%
Bootstrap support for A8BS96 as seed ortholog is 100%.
Bootstrap support for B3L4C7 as seed ortholog is 100%.

Group of orthologs #222. Best score 183 bits
Score difference with first non-orthologous sequence - G.intestinalis:183 P.knowlesi:183

A8BT37              	100.00%		B3LAC8              	100.00%
Bootstrap support for A8BT37 as seed ortholog is 100%.
Bootstrap support for B3LAC8 as seed ortholog is 100%.

Group of orthologs #223. Best score 182 bits
Score difference with first non-orthologous sequence - G.intestinalis:182 P.knowlesi:182

A8BCK2              	100.00%		B3LCS1              	100.00%
Bootstrap support for A8BCK2 as seed ortholog is 100%.
Bootstrap support for B3LCS1 as seed ortholog is 100%.

Group of orthologs #224. Best score 181 bits
Score difference with first non-orthologous sequence - G.intestinalis:31 P.knowlesi:181

A8BU43              	100.00%		B3L068              	100.00%
                    	       		B3L0H8              	36.85%
                    	       		B3L8L4              	16.30%
                    	       		B3L498              	13.32%
Bootstrap support for A8BU43 as seed ortholog is 82%.
Bootstrap support for B3L068 as seed ortholog is 100%.

Group of orthologs #225. Best score 181 bits
Score difference with first non-orthologous sequence - G.intestinalis:181 P.knowlesi:181

A8BE02              	100.00%		B3L734              	100.00%
Bootstrap support for A8BE02 as seed ortholog is 100%.
Bootstrap support for B3L734 as seed ortholog is 100%.

Group of orthologs #226. Best score 180 bits
Score difference with first non-orthologous sequence - G.intestinalis:180 P.knowlesi:180

A8B8U9              	100.00%		B3L6I5              	100.00%
Bootstrap support for A8B8U9 as seed ortholog is 100%.
Bootstrap support for B3L6I5 as seed ortholog is 100%.

Group of orthologs #227. Best score 180 bits
Score difference with first non-orthologous sequence - G.intestinalis:38 P.knowlesi:180

A8BKE0              	100.00%		B3L4H5              	100.00%
Bootstrap support for A8BKE0 as seed ortholog is 76%.
Bootstrap support for B3L4H5 as seed ortholog is 100%.

Group of orthologs #228. Best score 179 bits
Score difference with first non-orthologous sequence - G.intestinalis:76 P.knowlesi:110

A8B2I5              	100.00%		B3L1F8              	100.00%
Bootstrap support for A8B2I5 as seed ortholog is 92%.
Bootstrap support for B3L1F8 as seed ortholog is 69%.
Alternative seed ortholog is B3L5B3 (110 bits away from this cluster)

Group of orthologs #229. Best score 179 bits
Score difference with first non-orthologous sequence - G.intestinalis:86 P.knowlesi:103

A8B8P7              	100.00%		B3L1J2              	100.00%
Bootstrap support for A8B8P7 as seed ortholog is 99%.
Bootstrap support for B3L1J2 as seed ortholog is 99%.

Group of orthologs #230. Best score 179 bits
Score difference with first non-orthologous sequence - G.intestinalis:90 P.knowlesi:179

A8B6Z3              	100.00%		B3L3R9              	100.00%
Bootstrap support for A8B6Z3 as seed ortholog is 98%.
Bootstrap support for B3L3R9 as seed ortholog is 100%.

Group of orthologs #231. Best score 179 bits
Score difference with first non-orthologous sequence - G.intestinalis:179 P.knowlesi:179

A8BBB7              	100.00%		B3L5K0              	100.00%
Bootstrap support for A8BBB7 as seed ortholog is 100%.
Bootstrap support for B3L5K0 as seed ortholog is 100%.

Group of orthologs #232. Best score 179 bits
Score difference with first non-orthologous sequence - G.intestinalis:179 P.knowlesi:179

A8BS68              	100.00%		B3L3Q4              	100.00%
Bootstrap support for A8BS68 as seed ortholog is 100%.
Bootstrap support for B3L3Q4 as seed ortholog is 100%.

Group of orthologs #233. Best score 179 bits
Score difference with first non-orthologous sequence - G.intestinalis:179 P.knowlesi:179

A8BNT5              	100.00%		B3L904              	100.00%
Bootstrap support for A8BNT5 as seed ortholog is 100%.
Bootstrap support for B3L904 as seed ortholog is 100%.

Group of orthologs #234. Best score 178 bits
Score difference with first non-orthologous sequence - G.intestinalis:178 P.knowlesi:112

A8B6P2              	100.00%		B3L789              	100.00%
Bootstrap support for A8B6P2 as seed ortholog is 100%.
Bootstrap support for B3L789 as seed ortholog is 99%.

Group of orthologs #235. Best score 178 bits
Score difference with first non-orthologous sequence - G.intestinalis:178 P.knowlesi:178

A8B394              	100.00%		B3LAN7              	100.00%
Bootstrap support for A8B394 as seed ortholog is 100%.
Bootstrap support for B3LAN7 as seed ortholog is 100%.

Group of orthologs #236. Best score 178 bits
Score difference with first non-orthologous sequence - G.intestinalis:52 P.knowlesi:20

A8BHW1              	100.00%		B3LBW6              	100.00%
Bootstrap support for A8BHW1 as seed ortholog is 93%.
Bootstrap support for B3LBW6 as seed ortholog is 73%.
Alternative seed ortholog is B3LD00 (20 bits away from this cluster)

Group of orthologs #237. Best score 178 bits
Score difference with first non-orthologous sequence - G.intestinalis:178 P.knowlesi:118

A8BS37              	100.00%		B3L8R4              	100.00%
Bootstrap support for A8BS37 as seed ortholog is 100%.
Bootstrap support for B3L8R4 as seed ortholog is 100%.

Group of orthologs #238. Best score 177 bits
Score difference with first non-orthologous sequence - G.intestinalis:177 P.knowlesi:177

A8BYL9              	100.00%		B3KZF5              	100.00%
Bootstrap support for A8BYL9 as seed ortholog is 100%.
Bootstrap support for B3KZF5 as seed ortholog is 100%.

Group of orthologs #239. Best score 176 bits
Score difference with first non-orthologous sequence - G.intestinalis:176 P.knowlesi:176

A8BNF4              	100.00%		B3L4L9              	100.00%
Bootstrap support for A8BNF4 as seed ortholog is 100%.
Bootstrap support for B3L4L9 as seed ortholog is 100%.

Group of orthologs #240. Best score 176 bits
Score difference with first non-orthologous sequence - G.intestinalis:176 P.knowlesi:176

A8BTW2              	100.00%		B3L3Y9              	100.00%
Bootstrap support for A8BTW2 as seed ortholog is 100%.
Bootstrap support for B3L3Y9 as seed ortholog is 100%.

Group of orthologs #241. Best score 176 bits
Score difference with first non-orthologous sequence - G.intestinalis:30 P.knowlesi:59

A8BS74              	100.00%		B3LC83              	100.00%
Bootstrap support for A8BS74 as seed ortholog is 91%.
Bootstrap support for B3LC83 as seed ortholog is 99%.

Group of orthologs #242. Best score 175 bits
Score difference with first non-orthologous sequence - G.intestinalis:75 P.knowlesi:101

A8B9C8              	100.00%		B3L5N8              	100.00%
Bootstrap support for A8B9C8 as seed ortholog is 97%.
Bootstrap support for B3L5N8 as seed ortholog is 99%.

Group of orthologs #243. Best score 175 bits
Score difference with first non-orthologous sequence - G.intestinalis:175 P.knowlesi:175

A8BFY1              	100.00%		B3L6T8              	100.00%
Bootstrap support for A8BFY1 as seed ortholog is 100%.
Bootstrap support for B3L6T8 as seed ortholog is 100%.

Group of orthologs #244. Best score 175 bits
Score difference with first non-orthologous sequence - G.intestinalis:175 P.knowlesi:175

A8BZA6              	100.00%		B3L4N0              	100.00%
Bootstrap support for A8BZA6 as seed ortholog is 100%.
Bootstrap support for B3L4N0 as seed ortholog is 100%.

Group of orthologs #245. Best score 173 bits
Score difference with first non-orthologous sequence - G.intestinalis:7 P.knowlesi:31

A8B353              	100.00%		B3L603              	100.00%
A8BME4              	31.19%		
A8BJT1              	30.68%		
A8BDH0              	8.47%		
A8BDZ5              	6.61%		
Bootstrap support for A8B353 as seed ortholog is 57%.
Alternative seed ortholog is A8B614 (7 bits away from this cluster)
Bootstrap support for B3L603 as seed ortholog is 81%.

Group of orthologs #246. Best score 173 bits
Score difference with first non-orthologous sequence - G.intestinalis:173 P.knowlesi:173

A8BM39              	100.00%		B3L2N7              	100.00%
Bootstrap support for A8BM39 as seed ortholog is 100%.
Bootstrap support for B3L2N7 as seed ortholog is 100%.

Group of orthologs #247. Best score 173 bits
Score difference with first non-orthologous sequence - G.intestinalis:173 P.knowlesi:173

A8BMG9              	100.00%		B3L6V5              	100.00%
Bootstrap support for A8BMG9 as seed ortholog is 100%.
Bootstrap support for B3L6V5 as seed ortholog is 100%.

Group of orthologs #248. Best score 173 bits
Score difference with first non-orthologous sequence - G.intestinalis:173 P.knowlesi:173

E2RU77              	100.00%		B3L443              	100.00%
Bootstrap support for E2RU77 as seed ortholog is 100%.
Bootstrap support for B3L443 as seed ortholog is 100%.

Group of orthologs #249. Best score 172 bits
Score difference with first non-orthologous sequence - G.intestinalis:36 P.knowlesi:172

A8BTJ9              	100.00%		B3LAU5              	100.00%
Bootstrap support for A8BTJ9 as seed ortholog is 91%.
Bootstrap support for B3LAU5 as seed ortholog is 100%.

Group of orthologs #250. Best score 171 bits
Score difference with first non-orthologous sequence - G.intestinalis:171 P.knowlesi:38

A8BB91              	100.00%		B3LD93              	100.00%
A8BKD1              	27.74%		
A8BMQ2              	11.41%		
A8BN35              	7.61%		
A8BUN4              	7.05%		
A8BN58              	6.12%		
Bootstrap support for A8BB91 as seed ortholog is 100%.
Bootstrap support for B3LD93 as seed ortholog is 83%.

Group of orthologs #251. Best score 171 bits
Score difference with first non-orthologous sequence - G.intestinalis:171 P.knowlesi:79

A8BLH6              	100.00%		B3L769              	100.00%
Bootstrap support for A8BLH6 as seed ortholog is 100%.
Bootstrap support for B3L769 as seed ortholog is 96%.

Group of orthologs #252. Best score 170 bits
Score difference with first non-orthologous sequence - G.intestinalis:43 P.knowlesi:76

A8BC70              	100.00%		B3L711              	100.00%
Bootstrap support for A8BC70 as seed ortholog is 98%.
Bootstrap support for B3L711 as seed ortholog is 93%.

Group of orthologs #253. Best score 169 bits
Score difference with first non-orthologous sequence - G.intestinalis:169 P.knowlesi:169

A8BDS9              	100.00%		B3KZD2              	100.00%
Bootstrap support for A8BDS9 as seed ortholog is 100%.
Bootstrap support for B3KZD2 as seed ortholog is 100%.

Group of orthologs #254. Best score 168 bits
Score difference with first non-orthologous sequence - G.intestinalis:168 P.knowlesi:168

A8B6C1              	100.00%		B3L6L5              	100.00%
Bootstrap support for A8B6C1 as seed ortholog is 100%.
Bootstrap support for B3L6L5 as seed ortholog is 100%.

Group of orthologs #255. Best score 166 bits
Score difference with first non-orthologous sequence - G.intestinalis:91 P.knowlesi:96

A8BM37              	100.00%		B3KZR0              	100.00%
Bootstrap support for A8BM37 as seed ortholog is 99%.
Bootstrap support for B3KZR0 as seed ortholog is 99%.

Group of orthologs #256. Best score 166 bits
Score difference with first non-orthologous sequence - G.intestinalis:72 P.knowlesi:81

A8BBZ5              	100.00%		B3L7X1              	100.00%
Bootstrap support for A8BBZ5 as seed ortholog is 99%.
Bootstrap support for B3L7X1 as seed ortholog is 99%.

Group of orthologs #257. Best score 165 bits
Score difference with first non-orthologous sequence - G.intestinalis:165 P.knowlesi:165

A8BXD1              	100.00%		B3L0W6              	100.00%
Bootstrap support for A8BXD1 as seed ortholog is 100%.
Bootstrap support for B3L0W6 as seed ortholog is 100%.

Group of orthologs #258. Best score 165 bits
Score difference with first non-orthologous sequence - G.intestinalis:165 P.knowlesi:165

A8BRY6              	100.00%		B3L4C5              	100.00%
Bootstrap support for A8BRY6 as seed ortholog is 100%.
Bootstrap support for B3L4C5 as seed ortholog is 100%.

Group of orthologs #259. Best score 164 bits
Score difference with first non-orthologous sequence - G.intestinalis:164 P.knowlesi:164

A8B2B2              	100.00%		B3L2Z6              	100.00%
Bootstrap support for A8B2B2 as seed ortholog is 100%.
Bootstrap support for B3L2Z6 as seed ortholog is 100%.

Group of orthologs #260. Best score 163 bits
Score difference with first non-orthologous sequence - G.intestinalis:163 P.knowlesi:163

A8BH61              	100.00%		B3L7Q9              	100.00%
Bootstrap support for A8BH61 as seed ortholog is 100%.
Bootstrap support for B3L7Q9 as seed ortholog is 100%.

Group of orthologs #261. Best score 161 bits
Score difference with first non-orthologous sequence - G.intestinalis:161 P.knowlesi:161

A8BNI1              	100.00%		B3L714              	100.00%
A8BTG2              	14.22%		
Bootstrap support for A8BNI1 as seed ortholog is 100%.
Bootstrap support for B3L714 as seed ortholog is 100%.

Group of orthologs #262. Best score 161 bits
Score difference with first non-orthologous sequence - G.intestinalis:161 P.knowlesi:161

A8B1W6              	100.00%		B3L8V3              	100.00%
Bootstrap support for A8B1W6 as seed ortholog is 100%.
Bootstrap support for B3L8V3 as seed ortholog is 100%.

Group of orthologs #263. Best score 160 bits
Score difference with first non-orthologous sequence - G.intestinalis:160 P.knowlesi:160

A8B1V5              	100.00%		B3L0V6              	100.00%
Bootstrap support for A8B1V5 as seed ortholog is 100%.
Bootstrap support for B3L0V6 as seed ortholog is 100%.

Group of orthologs #264. Best score 160 bits
Score difference with first non-orthologous sequence - G.intestinalis:117 P.knowlesi:160

A8B755              	100.00%		B3L1B5              	100.00%
Bootstrap support for A8B755 as seed ortholog is 99%.
Bootstrap support for B3L1B5 as seed ortholog is 100%.

Group of orthologs #265. Best score 160 bits
Score difference with first non-orthologous sequence - G.intestinalis:160 P.knowlesi:58

A8BDE8              	100.00%		B3L4U7              	100.00%
Bootstrap support for A8BDE8 as seed ortholog is 100%.
Bootstrap support for B3L4U7 as seed ortholog is 93%.

Group of orthologs #266. Best score 160 bits
Score difference with first non-orthologous sequence - G.intestinalis:160 P.knowlesi:160

A8BZ58              	100.00%		B3L567              	100.00%
Bootstrap support for A8BZ58 as seed ortholog is 100%.
Bootstrap support for B3L567 as seed ortholog is 100%.

Group of orthologs #267. Best score 160 bits
Score difference with first non-orthologous sequence - G.intestinalis:160 P.knowlesi:160

E2RU83              	100.00%		B3L6A6              	100.00%
Bootstrap support for E2RU83 as seed ortholog is 100%.
Bootstrap support for B3L6A6 as seed ortholog is 100%.

Group of orthologs #268. Best score 158 bits
Score difference with first non-orthologous sequence - G.intestinalis:158 P.knowlesi:158

A8B2R9              	100.00%		B3L0B5              	100.00%
Bootstrap support for A8B2R9 as seed ortholog is 100%.
Bootstrap support for B3L0B5 as seed ortholog is 100%.

Group of orthologs #269. Best score 157 bits
Score difference with first non-orthologous sequence - G.intestinalis:157 P.knowlesi:157

A8B9L2              	100.00%		B3L673              	100.00%
E2RU03              	11.73%		
Bootstrap support for A8B9L2 as seed ortholog is 100%.
Bootstrap support for B3L673 as seed ortholog is 100%.

Group of orthologs #270. Best score 157 bits
Score difference with first non-orthologous sequence - G.intestinalis:157 P.knowlesi:157

A8BBU1              	100.00%		B3L3M9              	100.00%
Bootstrap support for A8BBU1 as seed ortholog is 100%.
Bootstrap support for B3L3M9 as seed ortholog is 100%.

Group of orthologs #271. Best score 157 bits
Score difference with first non-orthologous sequence - G.intestinalis:53 P.knowlesi:66

A8BV55              	100.00%		B3L2G9              	100.00%
Bootstrap support for A8BV55 as seed ortholog is 97%.
Bootstrap support for B3L2G9 as seed ortholog is 99%.

Group of orthologs #272. Best score 156 bits
Score difference with first non-orthologous sequence - G.intestinalis:77 P.knowlesi:65

A8B471              	100.00%		B3L7V1              	100.00%
E2RU29              	100.00%		B3L7M9              	87.04%
Bootstrap support for A8B471 as seed ortholog is 99%.
Bootstrap support for E2RU29 as seed ortholog is 99%.
Bootstrap support for B3L7V1 as seed ortholog is 99%.

Group of orthologs #273. Best score 156 bits
Score difference with first non-orthologous sequence - G.intestinalis:82 P.knowlesi:60

A8BAA9              	100.00%		B3L5R4              	100.00%
Bootstrap support for A8BAA9 as seed ortholog is 93%.
Bootstrap support for B3L5R4 as seed ortholog is 87%.

Group of orthologs #274. Best score 156 bits
Score difference with first non-orthologous sequence - G.intestinalis:21 P.knowlesi:28

A8BQH7              	100.00%		B3L9Z7              	100.00%
Bootstrap support for A8BQH7 as seed ortholog is 79%.
Bootstrap support for B3L9Z7 as seed ortholog is 78%.

Group of orthologs #275. Best score 155 bits
Score difference with first non-orthologous sequence - G.intestinalis:155 P.knowlesi:155

A8BE77              	100.00%		B3L963              	100.00%
Bootstrap support for A8BE77 as seed ortholog is 100%.
Bootstrap support for B3L963 as seed ortholog is 100%.

Group of orthologs #276. Best score 155 bits
Score difference with first non-orthologous sequence - G.intestinalis:155 P.knowlesi:155

A8BX05              	100.00%		B3L8C3              	100.00%
Bootstrap support for A8BX05 as seed ortholog is 100%.
Bootstrap support for B3L8C3 as seed ortholog is 100%.

Group of orthologs #277. Best score 154 bits
Score difference with first non-orthologous sequence - G.intestinalis:154 P.knowlesi:70

A8B3D0              	100.00%		B3L398              	100.00%
Bootstrap support for A8B3D0 as seed ortholog is 100%.
Bootstrap support for B3L398 as seed ortholog is 96%.

Group of orthologs #278. Best score 152 bits
Score difference with first non-orthologous sequence - G.intestinalis:152 P.knowlesi:152

A8B5R4              	100.00%		B3L684              	100.00%
Bootstrap support for A8B5R4 as seed ortholog is 100%.
Bootstrap support for B3L684 as seed ortholog is 100%.

Group of orthologs #279. Best score 149 bits
Score difference with first non-orthologous sequence - G.intestinalis:58 P.knowlesi:56

A8B8G9              	100.00%		B3L2M7              	100.00%
Bootstrap support for A8B8G9 as seed ortholog is 98%.
Bootstrap support for B3L2M7 as seed ortholog is 98%.

Group of orthologs #280. Best score 149 bits
Score difference with first non-orthologous sequence - G.intestinalis:149 P.knowlesi:149

A8BDV8              	100.00%		B3LD25              	100.00%
Bootstrap support for A8BDV8 as seed ortholog is 100%.
Bootstrap support for B3LD25 as seed ortholog is 100%.

Group of orthologs #281. Best score 149 bits
Score difference with first non-orthologous sequence - G.intestinalis:149 P.knowlesi:26

A8BTC0              	100.00%		B3LAK3              	100.00%
Bootstrap support for A8BTC0 as seed ortholog is 100%.
Bootstrap support for B3LAK3 as seed ortholog is 74%.
Alternative seed ortholog is B3LDA2 (26 bits away from this cluster)

Group of orthologs #282. Best score 148 bits
Score difference with first non-orthologous sequence - G.intestinalis:148 P.knowlesi:148

A8BCR3              	100.00%		B3L1A5              	100.00%
Bootstrap support for A8BCR3 as seed ortholog is 100%.
Bootstrap support for B3L1A5 as seed ortholog is 100%.

Group of orthologs #283. Best score 148 bits
Score difference with first non-orthologous sequence - G.intestinalis:148 P.knowlesi:148

A8B2G9              	100.00%		B3LCI8              	100.00%
Bootstrap support for A8B2G9 as seed ortholog is 100%.
Bootstrap support for B3LCI8 as seed ortholog is 100%.

Group of orthologs #284. Best score 148 bits
Score difference with first non-orthologous sequence - G.intestinalis:148 P.knowlesi:148

A8BKC6              	100.00%		B3LC68              	100.00%
Bootstrap support for A8BKC6 as seed ortholog is 100%.
Bootstrap support for B3LC68 as seed ortholog is 100%.

Group of orthologs #285. Best score 147 bits
Score difference with first non-orthologous sequence - G.intestinalis:147 P.knowlesi:147

A8B8I9              	100.00%		B3L9F2              	100.00%
Bootstrap support for A8B8I9 as seed ortholog is 100%.
Bootstrap support for B3L9F2 as seed ortholog is 100%.

Group of orthologs #286. Best score 147 bits
Score difference with first non-orthologous sequence - G.intestinalis:147 P.knowlesi:147

A8BS79              	100.00%		B3L3W7              	100.00%
Bootstrap support for A8BS79 as seed ortholog is 100%.
Bootstrap support for B3L3W7 as seed ortholog is 100%.

Group of orthologs #287. Best score 146 bits
Score difference with first non-orthologous sequence - G.intestinalis:146 P.knowlesi:146

A8BLL7              	100.00%		B3LAD9              	100.00%
Bootstrap support for A8BLL7 as seed ortholog is 100%.
Bootstrap support for B3LAD9 as seed ortholog is 100%.

Group of orthologs #288. Best score 145 bits
Score difference with first non-orthologous sequence - G.intestinalis:97 P.knowlesi:98

A8BYC9              	100.00%		B3L166              	100.00%
                    	       		B3L975              	100.00%
Bootstrap support for A8BYC9 as seed ortholog is 100%.
Bootstrap support for B3L166 as seed ortholog is 99%.
Bootstrap support for B3L975 as seed ortholog is 100%.

Group of orthologs #289. Best score 145 bits
Score difference with first non-orthologous sequence - G.intestinalis:145 P.knowlesi:145

A8BPI7              	100.00%		B3L7Q6              	100.00%
Bootstrap support for A8BPI7 as seed ortholog is 100%.
Bootstrap support for B3L7Q6 as seed ortholog is 100%.

Group of orthologs #290. Best score 144 bits
Score difference with first non-orthologous sequence - G.intestinalis:144 P.knowlesi:144

A8B7N5              	100.00%		B3L366              	100.00%
Bootstrap support for A8B7N5 as seed ortholog is 100%.
Bootstrap support for B3L366 as seed ortholog is 100%.

Group of orthologs #291. Best score 144 bits
Score difference with first non-orthologous sequence - G.intestinalis:144 P.knowlesi:144

A8B8Z2              	100.00%		B3L9A1              	100.00%
Bootstrap support for A8B8Z2 as seed ortholog is 100%.
Bootstrap support for B3L9A1 as seed ortholog is 100%.

Group of orthologs #292. Best score 144 bits
Score difference with first non-orthologous sequence - G.intestinalis:144 P.knowlesi:144

A8BT04              	100.00%		B3L8I6              	100.00%
Bootstrap support for A8BT04 as seed ortholog is 100%.
Bootstrap support for B3L8I6 as seed ortholog is 100%.

Group of orthologs #293. Best score 144 bits
Score difference with first non-orthologous sequence - G.intestinalis:144 P.knowlesi:144

A8BY78              	100.00%		B3LA31              	100.00%
Bootstrap support for A8BY78 as seed ortholog is 100%.
Bootstrap support for B3LA31 as seed ortholog is 100%.

Group of orthologs #294. Best score 143 bits
Score difference with first non-orthologous sequence - G.intestinalis:143 P.knowlesi:143

A8B1Y6              	100.00%		B3LA93              	100.00%
Bootstrap support for A8B1Y6 as seed ortholog is 100%.
Bootstrap support for B3LA93 as seed ortholog is 100%.

Group of orthologs #295. Best score 143 bits
Score difference with first non-orthologous sequence - G.intestinalis:143 P.knowlesi:143

A8B887              	100.00%		B3L9M4              	100.00%
Bootstrap support for A8B887 as seed ortholog is 100%.
Bootstrap support for B3L9M4 as seed ortholog is 100%.

Group of orthologs #296. Best score 143 bits
Score difference with first non-orthologous sequence - G.intestinalis:143 P.knowlesi:143

A8BRU6              	100.00%		B3L021              	100.00%
Bootstrap support for A8BRU6 as seed ortholog is 100%.
Bootstrap support for B3L021 as seed ortholog is 100%.

Group of orthologs #297. Best score 143 bits
Score difference with first non-orthologous sequence - G.intestinalis:143 P.knowlesi:143

A8BU75              	100.00%		B3L3H1              	100.00%
Bootstrap support for A8BU75 as seed ortholog is 100%.
Bootstrap support for B3L3H1 as seed ortholog is 100%.

Group of orthologs #298. Best score 143 bits
Score difference with first non-orthologous sequence - G.intestinalis:143 P.knowlesi:143

A8BQR0              	100.00%		B3LCJ4              	100.00%
Bootstrap support for A8BQR0 as seed ortholog is 100%.
Bootstrap support for B3LCJ4 as seed ortholog is 100%.

Group of orthologs #299. Best score 142 bits
Score difference with first non-orthologous sequence - G.intestinalis:142 P.knowlesi:142

A8B4T7              	100.00%		B3L8I5              	100.00%
Bootstrap support for A8B4T7 as seed ortholog is 100%.
Bootstrap support for B3L8I5 as seed ortholog is 100%.

Group of orthologs #300. Best score 141 bits
Score difference with first non-orthologous sequence - G.intestinalis:141 P.knowlesi:141

A8B4I6              	100.00%		B3KZP9              	100.00%
Bootstrap support for A8B4I6 as seed ortholog is 100%.
Bootstrap support for B3KZP9 as seed ortholog is 100%.

Group of orthologs #301. Best score 141 bits
Score difference with first non-orthologous sequence - G.intestinalis:141 P.knowlesi:141

A8BYS0              	100.00%		B3L4S8              	100.00%
Bootstrap support for A8BYS0 as seed ortholog is 100%.
Bootstrap support for B3L4S8 as seed ortholog is 100%.

Group of orthologs #302. Best score 139 bits
Score difference with first non-orthologous sequence - G.intestinalis:139 P.knowlesi:139

A8B388              	100.00%		B3LAL4              	100.00%
Bootstrap support for A8B388 as seed ortholog is 100%.
Bootstrap support for B3LAL4 as seed ortholog is 100%.

Group of orthologs #303. Best score 139 bits
Score difference with first non-orthologous sequence - G.intestinalis:139 P.knowlesi:139

A8BCJ9              	100.00%		B3L5M0              	100.00%
Bootstrap support for A8BCJ9 as seed ortholog is 100%.
Bootstrap support for B3L5M0 as seed ortholog is 100%.

Group of orthologs #304. Best score 139 bits
Score difference with first non-orthologous sequence - G.intestinalis:139 P.knowlesi:139

A8BMD9              	100.00%		B3L349              	100.00%
Bootstrap support for A8BMD9 as seed ortholog is 100%.
Bootstrap support for B3L349 as seed ortholog is 100%.

Group of orthologs #305. Best score 138 bits
Score difference with first non-orthologous sequence - G.intestinalis:138 P.knowlesi:138

A8BAF3              	100.00%		B3LDB6              	100.00%
Bootstrap support for A8BAF3 as seed ortholog is 100%.
Bootstrap support for B3LDB6 as seed ortholog is 100%.

Group of orthologs #306. Best score 138 bits
Score difference with first non-orthologous sequence - G.intestinalis:138 P.knowlesi:94

A8BL61              	100.00%		B3LCD2              	100.00%
Bootstrap support for A8BL61 as seed ortholog is 100%.
Bootstrap support for B3LCD2 as seed ortholog is 100%.

Group of orthologs #307. Best score 137 bits
Score difference with first non-orthologous sequence - G.intestinalis:137 P.knowlesi:137

A8B958              	100.00%		B3LAG9              	100.00%
Bootstrap support for A8B958 as seed ortholog is 100%.
Bootstrap support for B3LAG9 as seed ortholog is 100%.

Group of orthologs #308. Best score 136 bits
Score difference with first non-orthologous sequence - G.intestinalis:136 P.knowlesi:73

A8B338              	100.00%		B3LA28              	100.00%
A8BYC4              	98.60%		B3LCE5              	30.50%
A8BU80              	83.16%		
Bootstrap support for A8B338 as seed ortholog is 100%.
Bootstrap support for B3LA28 as seed ortholog is 99%.

Group of orthologs #309. Best score 136 bits
Score difference with first non-orthologous sequence - G.intestinalis:136 P.knowlesi:136

A8B8F8              	100.00%		B3L698              	100.00%
Bootstrap support for A8B8F8 as seed ortholog is 100%.
Bootstrap support for B3L698 as seed ortholog is 100%.

Group of orthologs #310. Best score 135 bits
Score difference with first non-orthologous sequence - G.intestinalis:135 P.knowlesi:135

A8B4V5              	100.00%		B3LDB9              	100.00%
A8B4X1              	31.12%		B3L4X0              	15.23%
A8BCE1              	10.94%		
A8BCF2              	6.63%		
Bootstrap support for A8B4V5 as seed ortholog is 100%.
Bootstrap support for B3LDB9 as seed ortholog is 100%.

Group of orthologs #311. Best score 135 bits
Score difference with first non-orthologous sequence - G.intestinalis:135 P.knowlesi:23

A8B2X3              	100.00%		B3L4M9              	100.00%
Bootstrap support for A8B2X3 as seed ortholog is 100%.
Bootstrap support for B3L4M9 as seed ortholog is 87%.

Group of orthologs #312. Best score 135 bits
Score difference with first non-orthologous sequence - G.intestinalis:135 P.knowlesi:135

A8B252              	100.00%		B3LAS9              	100.00%
Bootstrap support for A8B252 as seed ortholog is 100%.
Bootstrap support for B3LAS9 as seed ortholog is 100%.

Group of orthologs #313. Best score 135 bits
Score difference with first non-orthologous sequence - G.intestinalis:135 P.knowlesi:135

A8BUJ9              	100.00%		B3L4K2              	100.00%
Bootstrap support for A8BUJ9 as seed ortholog is 100%.
Bootstrap support for B3L4K2 as seed ortholog is 100%.

Group of orthologs #314. Best score 134 bits
Score difference with first non-orthologous sequence - G.intestinalis:134 P.knowlesi:75

A8B7P2              	100.00%		B3L6K9              	100.00%
Bootstrap support for A8B7P2 as seed ortholog is 100%.
Bootstrap support for B3L6K9 as seed ortholog is 99%.

Group of orthologs #315. Best score 134 bits
Score difference with first non-orthologous sequence - G.intestinalis:134 P.knowlesi:134

A8BWV2              	100.00%		B3L610              	100.00%
Bootstrap support for A8BWV2 as seed ortholog is 100%.
Bootstrap support for B3L610 as seed ortholog is 100%.

Group of orthologs #316. Best score 134 bits
Score difference with first non-orthologous sequence - G.intestinalis:134 P.knowlesi:134

A8BP59              	100.00%		B3LA90              	100.00%
Bootstrap support for A8BP59 as seed ortholog is 100%.
Bootstrap support for B3LA90 as seed ortholog is 100%.

Group of orthologs #317. Best score 133 bits
Score difference with first non-orthologous sequence - G.intestinalis:133 P.knowlesi:133

A8BPR0              	100.00%		B3KZJ5              	100.00%
Bootstrap support for A8BPR0 as seed ortholog is 100%.
Bootstrap support for B3KZJ5 as seed ortholog is 100%.

Group of orthologs #318. Best score 133 bits
Score difference with first non-orthologous sequence - G.intestinalis:133 P.knowlesi:133

A8B4Z5              	100.00%		B3LCK9              	100.00%
Bootstrap support for A8B4Z5 as seed ortholog is 100%.
Bootstrap support for B3LCK9 as seed ortholog is 100%.

Group of orthologs #319. Best score 133 bits
Score difference with first non-orthologous sequence - G.intestinalis:133 P.knowlesi:133

A8BQ93              	100.00%		B3L3I6              	100.00%
Bootstrap support for A8BQ93 as seed ortholog is 100%.
Bootstrap support for B3L3I6 as seed ortholog is 100%.

Group of orthologs #320. Best score 132 bits
Score difference with first non-orthologous sequence - G.intestinalis:24 P.knowlesi:3

E2RTT5              	100.00%		B3L4Y4              	100.00%
Bootstrap support for E2RTT5 as seed ortholog is 88%.
Bootstrap support for B3L4Y4 as seed ortholog is 56%.
Alternative seed ortholog is B3L0I0 (3 bits away from this cluster)

Group of orthologs #321. Best score 131 bits
Score difference with first non-orthologous sequence - G.intestinalis:131 P.knowlesi:131

A8B5I7              	100.00%		B3L7H0              	100.00%
Bootstrap support for A8B5I7 as seed ortholog is 100%.
Bootstrap support for B3L7H0 as seed ortholog is 100%.

Group of orthologs #322. Best score 130 bits
Score difference with first non-orthologous sequence - G.intestinalis:56 P.knowlesi:130

A8B1X1              	100.00%		B3L9L6              	100.00%
Bootstrap support for A8B1X1 as seed ortholog is 98%.
Bootstrap support for B3L9L6 as seed ortholog is 100%.

Group of orthologs #323. Best score 129 bits
Score difference with first non-orthologous sequence - G.intestinalis:129 P.knowlesi:68

A8B299              	100.00%		B3L0V4              	100.00%
A8BI27              	13.90%		
Bootstrap support for A8B299 as seed ortholog is 100%.
Bootstrap support for B3L0V4 as seed ortholog is 96%.

Group of orthologs #324. Best score 129 bits
Score difference with first non-orthologous sequence - G.intestinalis:129 P.knowlesi:129

A8B3C0              	100.00%		B3L873              	100.00%
Bootstrap support for A8B3C0 as seed ortholog is 100%.
Bootstrap support for B3L873 as seed ortholog is 100%.

Group of orthologs #325. Best score 127 bits
Score difference with first non-orthologous sequence - G.intestinalis:127 P.knowlesi:127

A8BQZ7              	100.00%		B3L0H5              	100.00%
Bootstrap support for A8BQZ7 as seed ortholog is 100%.
Bootstrap support for B3L0H5 as seed ortholog is 100%.

Group of orthologs #326. Best score 127 bits
Score difference with first non-orthologous sequence - G.intestinalis:127 P.knowlesi:127

A8BG29              	100.00%		B3LAM7              	100.00%
Bootstrap support for A8BG29 as seed ortholog is 100%.
Bootstrap support for B3LAM7 as seed ortholog is 100%.

Group of orthologs #327. Best score 126 bits
Score difference with first non-orthologous sequence - G.intestinalis:126 P.knowlesi:126

A8BQU8              	100.00%		B3L4F6              	100.00%
Bootstrap support for A8BQU8 as seed ortholog is 100%.
Bootstrap support for B3L4F6 as seed ortholog is 100%.

Group of orthologs #328. Best score 126 bits
Score difference with first non-orthologous sequence - G.intestinalis:62 P.knowlesi:56

A8BG76              	100.00%		B3LA43              	100.00%
Bootstrap support for A8BG76 as seed ortholog is 99%.
Bootstrap support for B3LA43 as seed ortholog is 98%.

Group of orthologs #329. Best score 126 bits
Score difference with first non-orthologous sequence - G.intestinalis:126 P.knowlesi:126

A8BRG5              	100.00%		B3LD68              	100.00%
Bootstrap support for A8BRG5 as seed ortholog is 100%.
Bootstrap support for B3LD68 as seed ortholog is 100%.

Group of orthologs #330. Best score 125 bits
Score difference with first non-orthologous sequence - G.intestinalis:5 P.knowlesi:49

A8B3M5              	100.00%		B3L6A1              	100.00%
Bootstrap support for A8B3M5 as seed ortholog is 64%.
Alternative seed ortholog is A8BBI7 (5 bits away from this cluster)
Bootstrap support for B3L6A1 as seed ortholog is 90%.

Group of orthologs #331. Best score 124 bits
Score difference with first non-orthologous sequence - G.intestinalis:34 P.knowlesi:43

A8BJ08              	100.00%		B3L6W2              	100.00%
Bootstrap support for A8BJ08 as seed ortholog is 97%.
Bootstrap support for B3L6W2 as seed ortholog is 99%.

Group of orthologs #332. Best score 124 bits
Score difference with first non-orthologous sequence - G.intestinalis:124 P.knowlesi:124

A8BIU1              	100.00%		B3L702              	100.00%
Bootstrap support for A8BIU1 as seed ortholog is 100%.
Bootstrap support for B3L702 as seed ortholog is 100%.

Group of orthologs #333. Best score 124 bits
Score difference with first non-orthologous sequence - G.intestinalis:124 P.knowlesi:124

A8BWP1              	100.00%		B3LBX3              	100.00%
Bootstrap support for A8BWP1 as seed ortholog is 100%.
Bootstrap support for B3LBX3 as seed ortholog is 100%.

Group of orthologs #334. Best score 123 bits
Score difference with first non-orthologous sequence - G.intestinalis:123 P.knowlesi:123

A8BMF0              	100.00%		B3L0G0              	100.00%
Bootstrap support for A8BMF0 as seed ortholog is 100%.
Bootstrap support for B3L0G0 as seed ortholog is 100%.

Group of orthologs #335. Best score 123 bits
Score difference with first non-orthologous sequence - G.intestinalis:123 P.knowlesi:123

A8BJ58              	100.00%		B3L2N5              	100.00%
Bootstrap support for A8BJ58 as seed ortholog is 100%.
Bootstrap support for B3L2N5 as seed ortholog is 100%.

Group of orthologs #336. Best score 123 bits
Score difference with first non-orthologous sequence - G.intestinalis:123 P.knowlesi:123

E2RU80              	100.00%		B3LCL9              	100.00%
Bootstrap support for E2RU80 as seed ortholog is 100%.
Bootstrap support for B3LCL9 as seed ortholog is 100%.

Group of orthologs #337. Best score 122 bits
Score difference with first non-orthologous sequence - G.intestinalis:122 P.knowlesi:122

A8BBP3              	100.00%		B3LBZ3              	100.00%
Bootstrap support for A8BBP3 as seed ortholog is 100%.
Bootstrap support for B3LBZ3 as seed ortholog is 100%.

Group of orthologs #338. Best score 121 bits
Score difference with first non-orthologous sequence - G.intestinalis:121 P.knowlesi:121

A8B2J7              	100.00%		B3L176              	100.00%
Bootstrap support for A8B2J7 as seed ortholog is 100%.
Bootstrap support for B3L176 as seed ortholog is 100%.

Group of orthologs #339. Best score 121 bits
Score difference with first non-orthologous sequence - G.intestinalis:121 P.knowlesi:121

A8BNY7              	100.00%		B3L5G8              	100.00%
Bootstrap support for A8BNY7 as seed ortholog is 100%.
Bootstrap support for B3L5G8 as seed ortholog is 100%.

Group of orthologs #340. Best score 121 bits
Score difference with first non-orthologous sequence - G.intestinalis:31 P.knowlesi:40

A8BXA9              	100.00%		B3L4I9              	100.00%
Bootstrap support for A8BXA9 as seed ortholog is 85%.
Bootstrap support for B3L4I9 as seed ortholog is 90%.

Group of orthologs #341. Best score 121 bits
Score difference with first non-orthologous sequence - G.intestinalis:121 P.knowlesi:121

E2RTR6              	100.00%		B3L7Z8              	100.00%
Bootstrap support for E2RTR6 as seed ortholog is 100%.
Bootstrap support for B3L7Z8 as seed ortholog is 100%.

Group of orthologs #342. Best score 119 bits
Score difference with first non-orthologous sequence - G.intestinalis:119 P.knowlesi:119

A8B3I5              	100.00%		B3KZA4              	100.00%
Bootstrap support for A8B3I5 as seed ortholog is 100%.
Bootstrap support for B3KZA4 as seed ortholog is 100%.

Group of orthologs #343. Best score 118 bits
Score difference with first non-orthologous sequence - G.intestinalis:118 P.knowlesi:118

A8BZ89              	100.00%		B3LB29              	100.00%
Bootstrap support for A8BZ89 as seed ortholog is 100%.
Bootstrap support for B3LB29 as seed ortholog is 100%.

Group of orthologs #344. Best score 117 bits
Score difference with first non-orthologous sequence - G.intestinalis:117 P.knowlesi:117

A8B593              	100.00%		B3L671              	100.00%
Bootstrap support for A8B593 as seed ortholog is 100%.
Bootstrap support for B3L671 as seed ortholog is 100%.

Group of orthologs #345. Best score 117 bits
Score difference with first non-orthologous sequence - G.intestinalis:117 P.knowlesi:117

A8BN26              	100.00%		B3L0Q3              	100.00%
Bootstrap support for A8BN26 as seed ortholog is 100%.
Bootstrap support for B3L0Q3 as seed ortholog is 100%.

Group of orthologs #346. Best score 117 bits
Score difference with first non-orthologous sequence - G.intestinalis:117 P.knowlesi:117

A8BWP7              	100.00%		B3L6U2              	100.00%
Bootstrap support for A8BWP7 as seed ortholog is 100%.
Bootstrap support for B3L6U2 as seed ortholog is 100%.

Group of orthologs #347. Best score 116 bits
Score difference with first non-orthologous sequence - G.intestinalis:116 P.knowlesi:116

A8BBJ5              	100.00%		B3L4R3              	100.00%
Bootstrap support for A8BBJ5 as seed ortholog is 100%.
Bootstrap support for B3L4R3 as seed ortholog is 100%.

Group of orthologs #348. Best score 116 bits
Score difference with first non-orthologous sequence - G.intestinalis:21 P.knowlesi:38

A8B939              	100.00%		B3L7Z4              	100.00%
Bootstrap support for A8B939 as seed ortholog is 80%.
Bootstrap support for B3L7Z4 as seed ortholog is 93%.

Group of orthologs #349. Best score 116 bits
Score difference with first non-orthologous sequence - G.intestinalis:116 P.knowlesi:116

A8BPX4              	100.00%		B3LC08              	100.00%
Bootstrap support for A8BPX4 as seed ortholog is 100%.
Bootstrap support for B3LC08 as seed ortholog is 100%.

Group of orthologs #350. Best score 116 bits
Score difference with first non-orthologous sequence - G.intestinalis:116 P.knowlesi:116

A8BU63              	100.00%		B3LDF8              	100.00%
Bootstrap support for A8BU63 as seed ortholog is 100%.
Bootstrap support for B3LDF8 as seed ortholog is 100%.

Group of orthologs #351. Best score 115 bits
Score difference with first non-orthologous sequence - G.intestinalis:115 P.knowlesi:115

A8BAD7              	100.00%		B3L3G4              	100.00%
Bootstrap support for A8BAD7 as seed ortholog is 100%.
Bootstrap support for B3L3G4 as seed ortholog is 100%.

Group of orthologs #352. Best score 114 bits
Score difference with first non-orthologous sequence - G.intestinalis:114 P.knowlesi:114

A8BE76              	100.00%		B3L879              	100.00%
Bootstrap support for A8BE76 as seed ortholog is 100%.
Bootstrap support for B3L879 as seed ortholog is 100%.

Group of orthologs #353. Best score 114 bits
Score difference with first non-orthologous sequence - G.intestinalis:114 P.knowlesi:114

A8BRN4              	100.00%		B3L994              	100.00%
Bootstrap support for A8BRN4 as seed ortholog is 100%.
Bootstrap support for B3L994 as seed ortholog is 100%.

Group of orthologs #354. Best score 113 bits
Score difference with first non-orthologous sequence - G.intestinalis:113 P.knowlesi:113

A8BA51              	100.00%		B3L1L3              	100.00%
Bootstrap support for A8BA51 as seed ortholog is 100%.
Bootstrap support for B3L1L3 as seed ortholog is 100%.

Group of orthologs #355. Best score 113 bits
Score difference with first non-orthologous sequence - G.intestinalis:113 P.knowlesi:113

A8BBV5              	100.00%		B3L2W0              	100.00%
Bootstrap support for A8BBV5 as seed ortholog is 100%.
Bootstrap support for B3L2W0 as seed ortholog is 100%.

Group of orthologs #356. Best score 113 bits
Score difference with first non-orthologous sequence - G.intestinalis:113 P.knowlesi:113

A8BPU6              	100.00%		B3L782              	100.00%
Bootstrap support for A8BPU6 as seed ortholog is 100%.
Bootstrap support for B3L782 as seed ortholog is 100%.

Group of orthologs #357. Best score 111 bits
Score difference with first non-orthologous sequence - G.intestinalis:111 P.knowlesi:111

A8BA42              	100.00%		B3L6G1              	100.00%
Bootstrap support for A8BA42 as seed ortholog is 100%.
Bootstrap support for B3L6G1 as seed ortholog is 100%.

Group of orthologs #358. Best score 109 bits
Score difference with first non-orthologous sequence - G.intestinalis:109 P.knowlesi:109

A8BKX9              	100.00%		B3L4V5              	100.00%
A8BTG7              	40.64%		B3L4V3              	62.77%
A8BFJ9              	37.24%		B3L4V4              	54.18%
A8BVM3              	36.86%		B3L9I5              	9.97%
A8B6Q6              	35.92%		
A8BX07              	26.84%		
A8BBW7              	22.12%		
A8BJH7              	10.96%		
Bootstrap support for A8BKX9 as seed ortholog is 100%.
Bootstrap support for B3L4V5 as seed ortholog is 100%.

Group of orthologs #359. Best score 109 bits
Score difference with first non-orthologous sequence - G.intestinalis:109 P.knowlesi:109

A8B700              	100.00%		B3KZF9              	100.00%
Bootstrap support for A8B700 as seed ortholog is 100%.
Bootstrap support for B3KZF9 as seed ortholog is 100%.

Group of orthologs #360. Best score 109 bits
Score difference with first non-orthologous sequence - G.intestinalis:109 P.knowlesi:109

A8BJF5              	100.00%		B3L899              	100.00%
Bootstrap support for A8BJF5 as seed ortholog is 100%.
Bootstrap support for B3L899 as seed ortholog is 100%.

Group of orthologs #361. Best score 108 bits
Score difference with first non-orthologous sequence - G.intestinalis:108 P.knowlesi:108

A8B5G5              	100.00%		B3L8G7              	100.00%
Bootstrap support for A8B5G5 as seed ortholog is 100%.
Bootstrap support for B3L8G7 as seed ortholog is 100%.

Group of orthologs #362. Best score 107 bits
Score difference with first non-orthologous sequence - G.intestinalis:107 P.knowlesi:107

A8BII2              	100.00%		B3KZA9              	100.00%
Bootstrap support for A8BII2 as seed ortholog is 100%.
Bootstrap support for B3KZA9 as seed ortholog is 100%.

Group of orthologs #363. Best score 107 bits
Score difference with first non-orthologous sequence - G.intestinalis:45 P.knowlesi:34

A8BPD3              	100.00%		B3KZ72              	100.00%
Bootstrap support for A8BPD3 as seed ortholog is 92%.
Bootstrap support for B3KZ72 as seed ortholog is 85%.

Group of orthologs #364. Best score 107 bits
Score difference with first non-orthologous sequence - G.intestinalis:107 P.knowlesi:107

A8BCP1              	100.00%		B3LD90              	100.00%
Bootstrap support for A8BCP1 as seed ortholog is 100%.
Bootstrap support for B3LD90 as seed ortholog is 100%.

Group of orthologs #365. Best score 106 bits
Score difference with first non-orthologous sequence - G.intestinalis:106 P.knowlesi:106

A8B2F8              	100.00%		B3L580              	100.00%
Bootstrap support for A8B2F8 as seed ortholog is 100%.
Bootstrap support for B3L580 as seed ortholog is 100%.

Group of orthologs #366. Best score 106 bits
Score difference with first non-orthologous sequence - G.intestinalis:106 P.knowlesi:106

A8BB33              	100.00%		B3L4P4              	100.00%
Bootstrap support for A8BB33 as seed ortholog is 100%.
Bootstrap support for B3L4P4 as seed ortholog is 100%.

Group of orthologs #367. Best score 106 bits
Score difference with first non-orthologous sequence - G.intestinalis:12 P.knowlesi:106

A8BMJ0              	100.00%		B3L543              	100.00%
Bootstrap support for A8BMJ0 as seed ortholog is 73%.
Alternative seed ortholog is A8BJG3 (12 bits away from this cluster)
Bootstrap support for B3L543 as seed ortholog is 100%.

Group of orthologs #368. Best score 106 bits
Score difference with first non-orthologous sequence - G.intestinalis:106 P.knowlesi:106

A8BWT5              	100.00%		B3L1J9              	100.00%
Bootstrap support for A8BWT5 as seed ortholog is 100%.
Bootstrap support for B3L1J9 as seed ortholog is 100%.

Group of orthologs #369. Best score 105 bits
Score difference with first non-orthologous sequence - G.intestinalis:105 P.knowlesi:105

A8BCI2              	100.00%		B3L2V1              	100.00%
Bootstrap support for A8BCI2 as seed ortholog is 100%.
Bootstrap support for B3L2V1 as seed ortholog is 100%.

Group of orthologs #370. Best score 105 bits
Score difference with first non-orthologous sequence - G.intestinalis:105 P.knowlesi:105

A8BHY6              	100.00%		B3L4N5              	100.00%
Bootstrap support for A8BHY6 as seed ortholog is 100%.
Bootstrap support for B3L4N5 as seed ortholog is 100%.

Group of orthologs #371. Best score 105 bits
Score difference with first non-orthologous sequence - G.intestinalis:105 P.knowlesi:105

A8BPQ4              	100.00%		B3LA20              	100.00%
Bootstrap support for A8BPQ4 as seed ortholog is 100%.
Bootstrap support for B3LA20 as seed ortholog is 100%.

Group of orthologs #372. Best score 104 bits
Score difference with first non-orthologous sequence - G.intestinalis:104 P.knowlesi:104

A8BGI6              	100.00%		B3L9B3              	100.00%
Bootstrap support for A8BGI6 as seed ortholog is 100%.
Bootstrap support for B3L9B3 as seed ortholog is 100%.

Group of orthologs #373. Best score 104 bits
Score difference with first non-orthologous sequence - G.intestinalis:104 P.knowlesi:104

A8BQZ5              	100.00%		B3L9G8              	100.00%
Bootstrap support for A8BQZ5 as seed ortholog is 100%.
Bootstrap support for B3L9G8 as seed ortholog is 100%.

Group of orthologs #374. Best score 104 bits
Score difference with first non-orthologous sequence - G.intestinalis:104 P.knowlesi:104

E2RTS8              	100.00%		B3L8G3              	100.00%
Bootstrap support for E2RTS8 as seed ortholog is 100%.
Bootstrap support for B3L8G3 as seed ortholog is 100%.

Group of orthologs #375. Best score 103 bits
Score difference with first non-orthologous sequence - G.intestinalis:103 P.knowlesi:103

A8BYY5              	100.00%		B3LC12              	100.00%
Bootstrap support for A8BYY5 as seed ortholog is 100%.
Bootstrap support for B3LC12 as seed ortholog is 100%.

Group of orthologs #376. Best score 102 bits
Score difference with first non-orthologous sequence - G.intestinalis:102 P.knowlesi:102

A8BJE5              	100.00%		B3L948              	100.00%
Bootstrap support for A8BJE5 as seed ortholog is 100%.
Bootstrap support for B3L948 as seed ortholog is 100%.

Group of orthologs #377. Best score 102 bits
Score difference with first non-orthologous sequence - G.intestinalis:102 P.knowlesi:102

A8BRL1              	100.00%		B3L8I0              	100.00%
Bootstrap support for A8BRL1 as seed ortholog is 100%.
Bootstrap support for B3L8I0 as seed ortholog is 100%.

Group of orthologs #378. Best score 101 bits
Score difference with first non-orthologous sequence - G.intestinalis:101 P.knowlesi:101

A8B9B7              	100.00%		B3L6H9              	100.00%
A8BRX7              	14.90%		
Bootstrap support for A8B9B7 as seed ortholog is 100%.
Bootstrap support for B3L6H9 as seed ortholog is 100%.

Group of orthologs #379. Best score 101 bits
Score difference with first non-orthologous sequence - G.intestinalis:101 P.knowlesi:101

A8B712              	100.00%		B3LB97              	100.00%
Bootstrap support for A8B712 as seed ortholog is 100%.
Bootstrap support for B3LB97 as seed ortholog is 100%.

Group of orthologs #380. Best score 101 bits
Score difference with first non-orthologous sequence - G.intestinalis:29 P.knowlesi:101

D3KGW0              	100.00%		B3L060              	100.00%
Bootstrap support for D3KGW0 as seed ortholog is 91%.
Bootstrap support for B3L060 as seed ortholog is 100%.

Group of orthologs #381. Best score 99 bits
Score difference with first non-orthologous sequence - G.intestinalis:99 P.knowlesi:99

A8BI78              	100.00%		B3L4K3              	100.00%
                    	       		B3LC36              	38.17%
Bootstrap support for A8BI78 as seed ortholog is 100%.
Bootstrap support for B3L4K3 as seed ortholog is 100%.

Group of orthologs #382. Best score 99 bits
Score difference with first non-orthologous sequence - G.intestinalis:99 P.knowlesi:99

A8BDA3              	100.00%		B3L973              	100.00%
Bootstrap support for A8BDA3 as seed ortholog is 100%.
Bootstrap support for B3L973 as seed ortholog is 100%.

Group of orthologs #383. Best score 99 bits
Score difference with first non-orthologous sequence - G.intestinalis:28 P.knowlesi:99

E2RU58              	100.00%		B3L6X3              	100.00%
Bootstrap support for E2RU58 as seed ortholog is 77%.
Bootstrap support for B3L6X3 as seed ortholog is 100%.

Group of orthologs #384. Best score 98 bits
Score difference with first non-orthologous sequence - G.intestinalis:98 P.knowlesi:98

A8B2Q4              	100.00%		B3LAD1              	100.00%
Bootstrap support for A8B2Q4 as seed ortholog is 100%.
Bootstrap support for B3LAD1 as seed ortholog is 100%.

Group of orthologs #385. Best score 98 bits
Score difference with first non-orthologous sequence - G.intestinalis:98 P.knowlesi:98

E2RU09              	100.00%		B3LAV2              	100.00%
Bootstrap support for E2RU09 as seed ortholog is 100%.
Bootstrap support for B3LAV2 as seed ortholog is 100%.

Group of orthologs #386. Best score 97 bits
Score difference with first non-orthologous sequence - G.intestinalis:97 P.knowlesi:97

A8BKW0              	100.00%		B3L7V6              	100.00%
                    	       		B3L241              	9.22%
                    	       		B3L5X9              	7.82%
Bootstrap support for A8BKW0 as seed ortholog is 100%.
Bootstrap support for B3L7V6 as seed ortholog is 100%.

Group of orthologs #387. Best score 97 bits
Score difference with first non-orthologous sequence - G.intestinalis:55 P.knowlesi:28

A8B6D0              	100.00%		B3L1N7              	100.00%
Bootstrap support for A8B6D0 as seed ortholog is 94%.
Bootstrap support for B3L1N7 as seed ortholog is 79%.

Group of orthologs #388. Best score 97 bits
Score difference with first non-orthologous sequence - G.intestinalis:97 P.knowlesi:97

A8B8Z9              	100.00%		B3L1K9              	100.00%
Bootstrap support for A8B8Z9 as seed ortholog is 100%.
Bootstrap support for B3L1K9 as seed ortholog is 100%.

Group of orthologs #389. Best score 97 bits
Score difference with first non-orthologous sequence - G.intestinalis:97 P.knowlesi:97

A8B433              	100.00%		B3L593              	100.00%
Bootstrap support for A8B433 as seed ortholog is 100%.
Bootstrap support for B3L593 as seed ortholog is 100%.

Group of orthologs #390. Best score 97 bits
Score difference with first non-orthologous sequence - G.intestinalis:97 P.knowlesi:97

A8BJ52              	100.00%		B3KYX5              	100.00%
Bootstrap support for A8BJ52 as seed ortholog is 100%.
Bootstrap support for B3KYX5 as seed ortholog is 100%.

Group of orthologs #391. Best score 97 bits
Score difference with first non-orthologous sequence - G.intestinalis:97 P.knowlesi:97

A8BIJ2              	100.00%		B3KZR6              	100.00%
Bootstrap support for A8BIJ2 as seed ortholog is 100%.
Bootstrap support for B3KZR6 as seed ortholog is 100%.

Group of orthologs #392. Best score 97 bits
Score difference with first non-orthologous sequence - G.intestinalis:49 P.knowlesi:32

A8BYT6              	100.00%		B3L3M8              	100.00%
Bootstrap support for A8BYT6 as seed ortholog is 96%.
Bootstrap support for B3L3M8 as seed ortholog is 81%.

Group of orthologs #393. Best score 97 bits
Score difference with first non-orthologous sequence - G.intestinalis:16 P.knowlesi:97

A8BQT4              	100.00%		B3LAS6              	100.00%
Bootstrap support for A8BQT4 as seed ortholog is 68%.
Alternative seed ortholog is A8BAD5 (16 bits away from this cluster)
Bootstrap support for B3LAS6 as seed ortholog is 100%.

Group of orthologs #394. Best score 96 bits
Score difference with first non-orthologous sequence - G.intestinalis:96 P.knowlesi:96

A8B7C1              	100.00%		B3L4F5              	100.00%
                    	       		B3L7Y8              	100.00%
Bootstrap support for A8B7C1 as seed ortholog is 100%.
Bootstrap support for B3L4F5 as seed ortholog is 100%.
Bootstrap support for B3L7Y8 as seed ortholog is 100%.

Group of orthologs #395. Best score 96 bits
Score difference with first non-orthologous sequence - G.intestinalis:96 P.knowlesi:96

A8BD66              	100.00%		B3L246              	100.00%
Bootstrap support for A8BD66 as seed ortholog is 100%.
Bootstrap support for B3L246 as seed ortholog is 100%.

Group of orthologs #396. Best score 96 bits
Score difference with first non-orthologous sequence - G.intestinalis:96 P.knowlesi:96

A8BAD9              	100.00%		B3L5N9              	100.00%
Bootstrap support for A8BAD9 as seed ortholog is 100%.
Bootstrap support for B3L5N9 as seed ortholog is 100%.

Group of orthologs #397. Best score 96 bits
Score difference with first non-orthologous sequence - G.intestinalis:96 P.knowlesi:96

A8BFT3              	100.00%		B3L470              	100.00%
Bootstrap support for A8BFT3 as seed ortholog is 100%.
Bootstrap support for B3L470 as seed ortholog is 100%.

Group of orthologs #398. Best score 96 bits
Score difference with first non-orthologous sequence - G.intestinalis:96 P.knowlesi:39

A8BXY5              	100.00%		B3L637              	100.00%
Bootstrap support for A8BXY5 as seed ortholog is 100%.
Bootstrap support for B3L637 as seed ortholog is 80%.

Group of orthologs #399. Best score 95 bits
Score difference with first non-orthologous sequence - G.intestinalis:95 P.knowlesi:95

A8B9C0              	100.00%		B3L623              	100.00%
Bootstrap support for A8B9C0 as seed ortholog is 100%.
Bootstrap support for B3L623 as seed ortholog is 100%.

Group of orthologs #400. Best score 95 bits
Score difference with first non-orthologous sequence - G.intestinalis:95 P.knowlesi:95

A8BYL5              	100.00%		B3L4D8              	100.00%
Bootstrap support for A8BYL5 as seed ortholog is 100%.
Bootstrap support for B3L4D8 as seed ortholog is 100%.

Group of orthologs #401. Best score 94 bits
Score difference with first non-orthologous sequence - G.intestinalis:94 P.knowlesi:94

A8BLV7              	100.00%		B3KZ11              	100.00%
Bootstrap support for A8BLV7 as seed ortholog is 100%.
Bootstrap support for B3KZ11 as seed ortholog is 100%.

Group of orthologs #402. Best score 94 bits
Score difference with first non-orthologous sequence - G.intestinalis:94 P.knowlesi:94

A8BQW5              	100.00%		B3KZI2              	100.00%
Bootstrap support for A8BQW5 as seed ortholog is 100%.
Bootstrap support for B3KZI2 as seed ortholog is 100%.

Group of orthologs #403. Best score 94 bits
Score difference with first non-orthologous sequence - G.intestinalis:42 P.knowlesi:94

A8BV56              	100.00%		B3L122              	100.00%
Bootstrap support for A8BV56 as seed ortholog is 87%.
Bootstrap support for B3L122 as seed ortholog is 100%.

Group of orthologs #404. Best score 94 bits
Score difference with first non-orthologous sequence - G.intestinalis:94 P.knowlesi:94

E2RTN0              	100.00%		B3L4G7              	100.00%
Bootstrap support for E2RTN0 as seed ortholog is 100%.
Bootstrap support for B3L4G7 as seed ortholog is 100%.

Group of orthologs #405. Best score 93 bits
Score difference with first non-orthologous sequence - G.intestinalis:93 P.knowlesi:93

A8BHS7              	100.00%		B3L7N0              	100.00%
                    	       		B3L3Z2              	15.88%
Bootstrap support for A8BHS7 as seed ortholog is 100%.
Bootstrap support for B3L7N0 as seed ortholog is 100%.

Group of orthologs #406. Best score 93 bits
Score difference with first non-orthologous sequence - G.intestinalis:19 P.knowlesi:53

A8B8A5              	100.00%		B3L1V9              	100.00%
Bootstrap support for A8B8A5 as seed ortholog is 93%.
Bootstrap support for B3L1V9 as seed ortholog is 99%.

Group of orthologs #407. Best score 93 bits
Score difference with first non-orthologous sequence - G.intestinalis:93 P.knowlesi:93

A8BM82              	100.00%		B3L9N2              	100.00%
Bootstrap support for A8BM82 as seed ortholog is 100%.
Bootstrap support for B3L9N2 as seed ortholog is 100%.

Group of orthologs #408. Best score 93 bits
Score difference with first non-orthologous sequence - G.intestinalis:93 P.knowlesi:93

A8BJL1              	100.00%		B3LBP5              	100.00%
Bootstrap support for A8BJL1 as seed ortholog is 100%.
Bootstrap support for B3LBP5 as seed ortholog is 100%.

Group of orthologs #409. Best score 92 bits
Score difference with first non-orthologous sequence - G.intestinalis:92 P.knowlesi:92

A8B966              	100.00%		B3L7D2              	100.00%
Bootstrap support for A8B966 as seed ortholog is 100%.
Bootstrap support for B3L7D2 as seed ortholog is 100%.

Group of orthologs #410. Best score 92 bits
Score difference with first non-orthologous sequence - G.intestinalis:92 P.knowlesi:92

A8B767              	100.00%		B3L997              	100.00%
Bootstrap support for A8B767 as seed ortholog is 100%.
Bootstrap support for B3L997 as seed ortholog is 100%.

Group of orthologs #411. Best score 92 bits
Score difference with first non-orthologous sequence - G.intestinalis:92 P.knowlesi:92

A8BKV6              	100.00%		B3L287              	100.00%
Bootstrap support for A8BKV6 as seed ortholog is 100%.
Bootstrap support for B3L287 as seed ortholog is 100%.

Group of orthologs #412. Best score 92 bits
Score difference with first non-orthologous sequence - G.intestinalis:92 P.knowlesi:9

A8BTV9              	100.00%		B3L2C7              	100.00%
Bootstrap support for A8BTV9 as seed ortholog is 100%.
Bootstrap support for B3L2C7 as seed ortholog is 62%.
Alternative seed ortholog is B3L3J7 (9 bits away from this cluster)

Group of orthologs #413. Best score 91 bits
Score difference with first non-orthologous sequence - G.intestinalis:91 P.knowlesi:91

A8BD57              	100.00%		B3L694              	100.00%
Bootstrap support for A8BD57 as seed ortholog is 100%.
Bootstrap support for B3L694 as seed ortholog is 100%.

Group of orthologs #414. Best score 91 bits
Score difference with first non-orthologous sequence - G.intestinalis:91 P.knowlesi:91

A8BDZ9              	100.00%		B3L5W9              	100.00%
Bootstrap support for A8BDZ9 as seed ortholog is 100%.
Bootstrap support for B3L5W9 as seed ortholog is 100%.

Group of orthologs #415. Best score 91 bits
Score difference with first non-orthologous sequence - G.intestinalis:91 P.knowlesi:91

A8BX50              	100.00%		B3L2X0              	100.00%
Bootstrap support for A8BX50 as seed ortholog is 100%.
Bootstrap support for B3L2X0 as seed ortholog is 100%.

Group of orthologs #416. Best score 91 bits
Score difference with first non-orthologous sequence - G.intestinalis:91 P.knowlesi:91

A8BGD6              	100.00%		B3LBX2              	100.00%
Bootstrap support for A8BGD6 as seed ortholog is 100%.
Bootstrap support for B3LBX2 as seed ortholog is 100%.

Group of orthologs #417. Best score 90 bits
Score difference with first non-orthologous sequence - G.intestinalis:90 P.knowlesi:90

A8BI43              	100.00%		B3L032              	100.00%
Bootstrap support for A8BI43 as seed ortholog is 100%.
Bootstrap support for B3L032 as seed ortholog is 100%.

Group of orthologs #418. Best score 90 bits
Score difference with first non-orthologous sequence - G.intestinalis:90 P.knowlesi:90

A8B7M9              	100.00%		B3L7Y6              	100.00%
Bootstrap support for A8B7M9 as seed ortholog is 100%.
Bootstrap support for B3L7Y6 as seed ortholog is 100%.

Group of orthologs #419. Best score 90 bits
Score difference with first non-orthologous sequence - G.intestinalis:90 P.knowlesi:90

A8BNY3              	100.00%		B3L507              	100.00%
Bootstrap support for A8BNY3 as seed ortholog is 100%.
Bootstrap support for B3L507 as seed ortholog is 100%.

Group of orthologs #420. Best score 89 bits
Score difference with first non-orthologous sequence - G.intestinalis:89 P.knowlesi:89

A8BKZ6              	100.00%		B3L098              	100.00%
Bootstrap support for A8BKZ6 as seed ortholog is 100%.
Bootstrap support for B3L098 as seed ortholog is 100%.

Group of orthologs #421. Best score 88 bits
Score difference with first non-orthologous sequence - G.intestinalis:88 P.knowlesi:32

A8BYB4              	100.00%		B3KZH1              	100.00%
                    	       		B3LBG1              	11.48%
Bootstrap support for A8BYB4 as seed ortholog is 100%.
Bootstrap support for B3KZH1 as seed ortholog is 76%.

Group of orthologs #422. Best score 88 bits
Score difference with first non-orthologous sequence - G.intestinalis:88 P.knowlesi:88

A8BGE2              	100.00%		B3L4E0              	100.00%
Bootstrap support for A8BGE2 as seed ortholog is 100%.
Bootstrap support for B3L4E0 as seed ortholog is 100%.

Group of orthologs #423. Best score 88 bits
Score difference with first non-orthologous sequence - G.intestinalis:88 P.knowlesi:88

A8BZX1              	100.00%		B3L0I6              	100.00%
Bootstrap support for A8BZX1 as seed ortholog is 100%.
Bootstrap support for B3L0I6 as seed ortholog is 100%.

Group of orthologs #424. Best score 87 bits
Score difference with first non-orthologous sequence - G.intestinalis:42 P.knowlesi:87

A8B1Z2              	100.00%		B3L125              	100.00%
Bootstrap support for A8B1Z2 as seed ortholog is 90%.
Bootstrap support for B3L125 as seed ortholog is 100%.

Group of orthologs #425. Best score 87 bits
Score difference with first non-orthologous sequence - G.intestinalis:87 P.knowlesi:87

A8B5N7              	100.00%		B3L1V2              	100.00%
Bootstrap support for A8B5N7 as seed ortholog is 100%.
Bootstrap support for B3L1V2 as seed ortholog is 100%.

Group of orthologs #426. Best score 87 bits
Score difference with first non-orthologous sequence - G.intestinalis:87 P.knowlesi:87

A8BJT5              	100.00%		B3L379              	100.00%
Bootstrap support for A8BJT5 as seed ortholog is 100%.
Bootstrap support for B3L379 as seed ortholog is 100%.

Group of orthologs #427. Best score 87 bits
Score difference with first non-orthologous sequence - G.intestinalis:87 P.knowlesi:87

A8BBW5              	100.00%		B3L9Q8              	100.00%
Bootstrap support for A8BBW5 as seed ortholog is 100%.
Bootstrap support for B3L9Q8 as seed ortholog is 100%.

Group of orthologs #428. Best score 87 bits
Score difference with first non-orthologous sequence - G.intestinalis:87 P.knowlesi:87

A8BME6              	100.00%		B3L7Y3              	100.00%
Bootstrap support for A8BME6 as seed ortholog is 100%.
Bootstrap support for B3L7Y3 as seed ortholog is 100%.

Group of orthologs #429. Best score 86 bits
Score difference with first non-orthologous sequence - G.intestinalis:24 P.knowlesi:86

A8BG20              	100.00%		B3L0T6              	100.00%
Bootstrap support for A8BG20 as seed ortholog is 83%.
Bootstrap support for B3L0T6 as seed ortholog is 100%.

Group of orthologs #430. Best score 86 bits
Score difference with first non-orthologous sequence - G.intestinalis:86 P.knowlesi:86

A8BGC6              	100.00%		B3L2Z4              	100.00%
Bootstrap support for A8BGC6 as seed ortholog is 100%.
Bootstrap support for B3L2Z4 as seed ortholog is 100%.

Group of orthologs #431. Best score 86 bits
Score difference with first non-orthologous sequence - G.intestinalis:86 P.knowlesi:86

A8BCY8              	100.00%		B3L6M1              	100.00%
Bootstrap support for A8BCY8 as seed ortholog is 100%.
Bootstrap support for B3L6M1 as seed ortholog is 100%.

Group of orthologs #432. Best score 86 bits
Score difference with first non-orthologous sequence - G.intestinalis:86 P.knowlesi:86

A8BHU7              	100.00%		B3LD51              	100.00%
Bootstrap support for A8BHU7 as seed ortholog is 100%.
Bootstrap support for B3LD51 as seed ortholog is 100%.

Group of orthologs #433. Best score 85 bits
Score difference with first non-orthologous sequence - G.intestinalis:85 P.knowlesi:85

A8B9T6              	100.00%		B3L6A8              	100.00%
Bootstrap support for A8B9T6 as seed ortholog is 100%.
Bootstrap support for B3L6A8 as seed ortholog is 100%.

Group of orthologs #434. Best score 85 bits
Score difference with first non-orthologous sequence - G.intestinalis:85 P.knowlesi:85

A8BZ22              	100.00%		B3L3E3              	100.00%
Bootstrap support for A8BZ22 as seed ortholog is 100%.
Bootstrap support for B3L3E3 as seed ortholog is 100%.

Group of orthologs #435. Best score 84 bits
Score difference with first non-orthologous sequence - G.intestinalis:84 P.knowlesi:84

A8BRK1              	100.00%		B3L2Q4              	100.00%
Bootstrap support for A8BRK1 as seed ortholog is 100%.
Bootstrap support for B3L2Q4 as seed ortholog is 100%.

Group of orthologs #436. Best score 84 bits
Score difference with first non-orthologous sequence - G.intestinalis:84 P.knowlesi:84

A8BJH8              	100.00%		B3L7K8              	100.00%
Bootstrap support for A8BJH8 as seed ortholog is 100%.
Bootstrap support for B3L7K8 as seed ortholog is 100%.

Group of orthologs #437. Best score 84 bits
Score difference with first non-orthologous sequence - G.intestinalis:84 P.knowlesi:84

A8BT16              	100.00%		B3L8P9              	100.00%
Bootstrap support for A8BT16 as seed ortholog is 100%.
Bootstrap support for B3L8P9 as seed ortholog is 100%.

Group of orthologs #438. Best score 83 bits
Score difference with first non-orthologous sequence - G.intestinalis:83 P.knowlesi:83

A8BVL6              	100.00%		B3L3W2              	100.00%
A8BTA8              	11.98%		
A8B7B6              	9.75%		
A8B2I7              	8.14%		
A8BIQ0              	6.54%		
A8B938              	6.03%		
A8BRY1              	5.99%		
A8BWN3              	5.19%		
Bootstrap support for A8BVL6 as seed ortholog is 100%.
Bootstrap support for B3L3W2 as seed ortholog is 100%.

Group of orthologs #439. Best score 83 bits
Score difference with first non-orthologous sequence - G.intestinalis:83 P.knowlesi:83

E2RTX0              	100.00%		B3L1X5              	100.00%
Bootstrap support for E2RTX0 as seed ortholog is 100%.
Bootstrap support for B3L1X5 as seed ortholog is 100%.

Group of orthologs #440. Best score 82 bits
Score difference with first non-orthologous sequence - G.intestinalis:82 P.knowlesi:82

A8BAL6              	100.00%		B3KZ26              	100.00%
Bootstrap support for A8BAL6 as seed ortholog is 100%.
Bootstrap support for B3KZ26 as seed ortholog is 100%.

Group of orthologs #441. Best score 82 bits
Score difference with first non-orthologous sequence - G.intestinalis:82 P.knowlesi:82

A8BUB5              	100.00%		B3KZ28              	100.00%
Bootstrap support for A8BUB5 as seed ortholog is 100%.
Bootstrap support for B3KZ28 as seed ortholog is 100%.

Group of orthologs #442. Best score 82 bits
Score difference with first non-orthologous sequence - G.intestinalis:82 P.knowlesi:82

A8BMP6              	100.00%		B3L901              	100.00%
Bootstrap support for A8BMP6 as seed ortholog is 100%.
Bootstrap support for B3L901 as seed ortholog is 100%.

Group of orthologs #443. Best score 81 bits
Score difference with first non-orthologous sequence - G.intestinalis:81 P.knowlesi:81

A8B4G0              	100.00%		B3L3G6              	100.00%
Bootstrap support for A8B4G0 as seed ortholog is 100%.
Bootstrap support for B3L3G6 as seed ortholog is 100%.

Group of orthologs #444. Best score 81 bits
Score difference with first non-orthologous sequence - G.intestinalis:81 P.knowlesi:81

A8B652              	100.00%		B3L9J5              	100.00%
Bootstrap support for A8B652 as seed ortholog is 100%.
Bootstrap support for B3L9J5 as seed ortholog is 100%.

Group of orthologs #445. Best score 81 bits
Score difference with first non-orthologous sequence - G.intestinalis:81 P.knowlesi:81

A8BAB6              	100.00%		B3L8Y8              	100.00%
Bootstrap support for A8BAB6 as seed ortholog is 100%.
Bootstrap support for B3L8Y8 as seed ortholog is 100%.

Group of orthologs #446. Best score 81 bits
Score difference with first non-orthologous sequence - G.intestinalis:81 P.knowlesi:81

A8BT38              	100.00%		B3LBI9              	100.00%
Bootstrap support for A8BT38 as seed ortholog is 100%.
Bootstrap support for B3LBI9 as seed ortholog is 100%.

Group of orthologs #447. Best score 80 bits
Score difference with first non-orthologous sequence - G.intestinalis:80 P.knowlesi:80

A8B4L4              	100.00%		B3L0J3              	100.00%
Bootstrap support for A8B4L4 as seed ortholog is 100%.
Bootstrap support for B3L0J3 as seed ortholog is 100%.

Group of orthologs #448. Best score 80 bits
Score difference with first non-orthologous sequence - G.intestinalis:80 P.knowlesi:80

A8B6M8              	100.00%		B3LC67              	100.00%
Bootstrap support for A8B6M8 as seed ortholog is 100%.
Bootstrap support for B3LC67 as seed ortholog is 100%.

Group of orthologs #449. Best score 80 bits
Score difference with first non-orthologous sequence - G.intestinalis:80 P.knowlesi:80

A8BFR0              	100.00%		B3L8K9              	100.00%
Bootstrap support for A8BFR0 as seed ortholog is 100%.
Bootstrap support for B3L8K9 as seed ortholog is 100%.

Group of orthologs #450. Best score 80 bits
Score difference with first non-orthologous sequence - G.intestinalis:80 P.knowlesi:80

A8BSR3              	100.00%		B3L3E0              	100.00%
Bootstrap support for A8BSR3 as seed ortholog is 100%.
Bootstrap support for B3L3E0 as seed ortholog is 100%.

Group of orthologs #451. Best score 80 bits
Score difference with first non-orthologous sequence - G.intestinalis:80 P.knowlesi:80

A8BN05              	100.00%		B3L6U3              	100.00%
Bootstrap support for A8BN05 as seed ortholog is 100%.
Bootstrap support for B3L6U3 as seed ortholog is 100%.

Group of orthologs #452. Best score 79 bits
Score difference with first non-orthologous sequence - G.intestinalis:79 P.knowlesi:79

A8B1T3              	100.00%		B3L9F7              	100.00%
Bootstrap support for A8B1T3 as seed ortholog is 100%.
Bootstrap support for B3L9F7 as seed ortholog is 100%.

Group of orthologs #453. Best score 79 bits
Score difference with first non-orthologous sequence - G.intestinalis:79 P.knowlesi:79

A8BMF7              	100.00%		B3KZ52              	100.00%
Bootstrap support for A8BMF7 as seed ortholog is 100%.
Bootstrap support for B3KZ52 as seed ortholog is 100%.

Group of orthologs #454. Best score 79 bits
Score difference with first non-orthologous sequence - G.intestinalis:79 P.knowlesi:79

A8BKU3              	100.00%		B3L0B0              	100.00%
Bootstrap support for A8BKU3 as seed ortholog is 100%.
Bootstrap support for B3L0B0 as seed ortholog is 100%.

Group of orthologs #455. Best score 79 bits
Score difference with first non-orthologous sequence - G.intestinalis:79 P.knowlesi:79

A8BR71              	100.00%		B3L0L0              	100.00%
Bootstrap support for A8BR71 as seed ortholog is 100%.
Bootstrap support for B3L0L0 as seed ortholog is 100%.

Group of orthologs #456. Best score 79 bits
Score difference with first non-orthologous sequence - G.intestinalis:79 P.knowlesi:79

A8BT40              	100.00%		B3L2Z2              	100.00%
Bootstrap support for A8BT40 as seed ortholog is 100%.
Bootstrap support for B3L2Z2 as seed ortholog is 100%.

Group of orthologs #457. Best score 78 bits
Score difference with first non-orthologous sequence - G.intestinalis:78 P.knowlesi:78

A8BFV8              	100.00%		B3L2L4              	100.00%
Bootstrap support for A8BFV8 as seed ortholog is 100%.
Bootstrap support for B3L2L4 as seed ortholog is 100%.

Group of orthologs #458. Best score 78 bits
Score difference with first non-orthologous sequence - G.intestinalis:78 P.knowlesi:78

A8BYR9              	100.00%		B3L001              	100.00%
Bootstrap support for A8BYR9 as seed ortholog is 100%.
Bootstrap support for B3L001 as seed ortholog is 100%.

Group of orthologs #459. Best score 78 bits
Score difference with first non-orthologous sequence - G.intestinalis:78 P.knowlesi:78

A8BGM5              	100.00%		B3LBQ7              	100.00%
Bootstrap support for A8BGM5 as seed ortholog is 100%.
Bootstrap support for B3LBQ7 as seed ortholog is 100%.

Group of orthologs #460. Best score 78 bits
Score difference with first non-orthologous sequence - G.intestinalis:78 P.knowlesi:78

E2RTY6              	100.00%		B3LBD4              	100.00%
Bootstrap support for E2RTY6 as seed ortholog is 100%.
Bootstrap support for B3LBD4 as seed ortholog is 100%.

Group of orthologs #461. Best score 77 bits
Score difference with first non-orthologous sequence - G.intestinalis:77 P.knowlesi:77

A8B8S6              	100.00%		B3LCV6              	100.00%
Bootstrap support for A8B8S6 as seed ortholog is 100%.
Bootstrap support for B3LCV6 as seed ortholog is 100%.

Group of orthologs #462. Best score 77 bits
Score difference with first non-orthologous sequence - G.intestinalis:77 P.knowlesi:77

A8BXX1              	100.00%		B3L3P6              	100.00%
Bootstrap support for A8BXX1 as seed ortholog is 100%.
Bootstrap support for B3L3P6 as seed ortholog is 100%.

Group of orthologs #463. Best score 76 bits
Score difference with first non-orthologous sequence - G.intestinalis:76 P.knowlesi:76

A8BEX3              	100.00%		B3L8R9              	100.00%
Bootstrap support for A8BEX3 as seed ortholog is 100%.
Bootstrap support for B3L8R9 as seed ortholog is 100%.

Group of orthologs #464. Best score 75 bits
Score difference with first non-orthologous sequence - G.intestinalis:75 P.knowlesi:75

A8BD96              	100.00%		B3L9I1              	100.00%
Bootstrap support for A8BD96 as seed ortholog is 100%.
Bootstrap support for B3L9I1 as seed ortholog is 100%.

Group of orthologs #465. Best score 75 bits
Score difference with first non-orthologous sequence - G.intestinalis:75 P.knowlesi:75

E2RU02              	100.00%		B3LCE1              	100.00%
Bootstrap support for E2RU02 as seed ortholog is 100%.
Bootstrap support for B3LCE1 as seed ortholog is 100%.

Group of orthologs #466. Best score 74 bits
Score difference with first non-orthologous sequence - G.intestinalis:74 P.knowlesi:74

A8BEE3              	100.00%		B3LC27              	100.00%
A8BE48              	19.38%		
A8BAE2              	8.73%		
Bootstrap support for A8BEE3 as seed ortholog is 100%.
Bootstrap support for B3LC27 as seed ortholog is 100%.

Group of orthologs #467. Best score 74 bits
Score difference with first non-orthologous sequence - G.intestinalis:74 P.knowlesi:74

A8BE26              	100.00%		B3L1U4              	100.00%
Bootstrap support for A8BE26 as seed ortholog is 100%.
Bootstrap support for B3L1U4 as seed ortholog is 100%.

Group of orthologs #468. Best score 74 bits
Score difference with first non-orthologous sequence - G.intestinalis:74 P.knowlesi:74

A8B7R2              	100.00%		B3LBX9              	100.00%
Bootstrap support for A8B7R2 as seed ortholog is 100%.
Bootstrap support for B3LBX9 as seed ortholog is 100%.

Group of orthologs #469. Best score 74 bits
Score difference with first non-orthologous sequence - G.intestinalis:15 P.knowlesi:74

A8BD51              	100.00%		B3L8U3              	100.00%
Bootstrap support for A8BD51 as seed ortholog is 60%.
Alternative seed ortholog is A8BJH4 (15 bits away from this cluster)
Bootstrap support for B3L8U3 as seed ortholog is 100%.

Group of orthologs #470. Best score 74 bits
Score difference with first non-orthologous sequence - G.intestinalis:74 P.knowlesi:74

A8BAS0              	100.00%		B3LBW4              	100.00%
Bootstrap support for A8BAS0 as seed ortholog is 100%.
Bootstrap support for B3LBW4 as seed ortholog is 100%.

Group of orthologs #471. Best score 74 bits
Score difference with first non-orthologous sequence - G.intestinalis:74 P.knowlesi:74

A8BRG7              	100.00%		B3L554              	100.00%
Bootstrap support for A8BRG7 as seed ortholog is 100%.
Bootstrap support for B3L554 as seed ortholog is 100%.

Group of orthologs #472. Best score 73 bits
Score difference with first non-orthologous sequence - G.intestinalis:73 P.knowlesi:73

A8BLG8              	100.00%		B3L5Y9              	100.00%
Bootstrap support for A8BLG8 as seed ortholog is 100%.
Bootstrap support for B3L5Y9 as seed ortholog is 100%.

Group of orthologs #473. Best score 73 bits
Score difference with first non-orthologous sequence - G.intestinalis:73 P.knowlesi:73

A8BCP2              	100.00%		B3LD67              	100.00%
Bootstrap support for A8BCP2 as seed ortholog is 100%.
Bootstrap support for B3LD67 as seed ortholog is 100%.

Group of orthologs #474. Best score 73 bits
Score difference with first non-orthologous sequence - G.intestinalis:73 P.knowlesi:73

A8BFP4              	100.00%		B3LCT3              	100.00%
Bootstrap support for A8BFP4 as seed ortholog is 100%.
Bootstrap support for B3LCT3 as seed ortholog is 100%.

Group of orthologs #475. Best score 72 bits
Score difference with first non-orthologous sequence - G.intestinalis:72 P.knowlesi:72

A8B8S2              	100.00%		B3L085              	100.00%
                    	       		B3L5E0              	6.89%
Bootstrap support for A8B8S2 as seed ortholog is 100%.
Bootstrap support for B3L085 as seed ortholog is 100%.

Group of orthologs #476. Best score 72 bits
Score difference with first non-orthologous sequence - G.intestinalis:72 P.knowlesi:29

A8BVK2              	100.00%		B3L2U6              	100.00%
A8BVK4              	59.31%		
Bootstrap support for A8BVK2 as seed ortholog is 100%.
Bootstrap support for B3L2U6 as seed ortholog is 92%.

Group of orthologs #477. Best score 72 bits
Score difference with first non-orthologous sequence - G.intestinalis:72 P.knowlesi:72

A8BL31              	100.00%		B3KZG4              	100.00%
Bootstrap support for A8BL31 as seed ortholog is 100%.
Bootstrap support for B3KZG4 as seed ortholog is 100%.

Group of orthologs #478. Best score 72 bits
Score difference with first non-orthologous sequence - G.intestinalis:72 P.knowlesi:72

A8BK46              	100.00%		B3L136              	100.00%
Bootstrap support for A8BK46 as seed ortholog is 100%.
Bootstrap support for B3L136 as seed ortholog is 100%.

Group of orthologs #479. Best score 72 bits
Score difference with first non-orthologous sequence - G.intestinalis:72 P.knowlesi:72

A8BH30              	100.00%		B3L341              	100.00%
Bootstrap support for A8BH30 as seed ortholog is 100%.
Bootstrap support for B3L341 as seed ortholog is 100%.

Group of orthologs #480. Best score 72 bits
Score difference with first non-orthologous sequence - G.intestinalis:72 P.knowlesi:72

A8BBN6              	100.00%		B3L6G0              	100.00%
Bootstrap support for A8BBN6 as seed ortholog is 100%.
Bootstrap support for B3L6G0 as seed ortholog is 100%.

Group of orthologs #481. Best score 72 bits
Score difference with first non-orthologous sequence - G.intestinalis:72 P.knowlesi:72

A8BRM0              	100.00%		B3L059              	100.00%
Bootstrap support for A8BRM0 as seed ortholog is 100%.
Bootstrap support for B3L059 as seed ortholog is 100%.

Group of orthologs #482. Best score 72 bits
Score difference with first non-orthologous sequence - G.intestinalis:72 P.knowlesi:72

A8B4L5              	100.00%		B3LDC2              	100.00%
Bootstrap support for A8B4L5 as seed ortholog is 100%.
Bootstrap support for B3LDC2 as seed ortholog is 100%.

Group of orthologs #483. Best score 71 bits
Score difference with first non-orthologous sequence - G.intestinalis:71 P.knowlesi:6

A8B6R7              	100.00%		B3L7G4              	100.00%
Bootstrap support for A8B6R7 as seed ortholog is 100%.
Bootstrap support for B3L7G4 as seed ortholog is 56%.
Alternative seed ortholog is B3L418 (6 bits away from this cluster)

Group of orthologs #484. Best score 71 bits
Score difference with first non-orthologous sequence - G.intestinalis:71 P.knowlesi:71

A8B7A8              	100.00%		B3LAK8              	100.00%
Bootstrap support for A8B7A8 as seed ortholog is 100%.
Bootstrap support for B3LAK8 as seed ortholog is 100%.

Group of orthologs #485. Best score 71 bits
Score difference with first non-orthologous sequence - G.intestinalis:71 P.knowlesi:71

A8BIY1              	100.00%		B3L4Z6              	100.00%
Bootstrap support for A8BIY1 as seed ortholog is 100%.
Bootstrap support for B3L4Z6 as seed ortholog is 100%.

Group of orthologs #486. Best score 71 bits
Score difference with first non-orthologous sequence - G.intestinalis:71 P.knowlesi:71

A8BKK5              	100.00%		B3L5N0              	100.00%
Bootstrap support for A8BKK5 as seed ortholog is 100%.
Bootstrap support for B3L5N0 as seed ortholog is 100%.

Group of orthologs #487. Best score 71 bits
Score difference with first non-orthologous sequence - G.intestinalis:71 P.knowlesi:71

A8BL02              	100.00%		B3L7V0              	100.00%
Bootstrap support for A8BL02 as seed ortholog is 100%.
Bootstrap support for B3L7V0 as seed ortholog is 100%.

Group of orthologs #488. Best score 71 bits
Score difference with first non-orthologous sequence - G.intestinalis:71 P.knowlesi:71

A8BNY1              	100.00%		B3LAY3              	100.00%
Bootstrap support for A8BNY1 as seed ortholog is 100%.
Bootstrap support for B3LAY3 as seed ortholog is 100%.

Group of orthologs #489. Best score 69 bits
Score difference with first non-orthologous sequence - G.intestinalis:69 P.knowlesi:69

A8B4F3              	100.00%		B3L9F1              	100.00%
Bootstrap support for A8B4F3 as seed ortholog is 100%.
Bootstrap support for B3L9F1 as seed ortholog is 100%.

Group of orthologs #490. Best score 69 bits
Score difference with first non-orthologous sequence - G.intestinalis:69 P.knowlesi:69

A8B4F8              	100.00%		B3LA74              	100.00%
Bootstrap support for A8B4F8 as seed ortholog is 100%.
Bootstrap support for B3LA74 as seed ortholog is 100%.

Group of orthologs #491. Best score 68 bits
Score difference with first non-orthologous sequence - G.intestinalis:68 P.knowlesi:68

A8BJ23              	100.00%		B3LBJ2              	100.00%
Bootstrap support for A8BJ23 as seed ortholog is 100%.
Bootstrap support for B3LBJ2 as seed ortholog is 100%.

Group of orthologs #492. Best score 67 bits
Score difference with first non-orthologous sequence - G.intestinalis:10 P.knowlesi:67

A8BVI7              	100.00%		B3L163              	100.00%
Bootstrap support for A8BVI7 as seed ortholog is 59%.
Alternative seed ortholog is A8BR03 (10 bits away from this cluster)
Bootstrap support for B3L163 as seed ortholog is 100%.

Group of orthologs #493. Best score 67 bits
Score difference with first non-orthologous sequence - G.intestinalis:67 P.knowlesi:67

A8BEC3              	100.00%		B3L9Y0              	100.00%
Bootstrap support for A8BEC3 as seed ortholog is 100%.
Bootstrap support for B3L9Y0 as seed ortholog is 100%.

Group of orthologs #494. Best score 67 bits
Score difference with first non-orthologous sequence - G.intestinalis:67 P.knowlesi:67

A8BYT1              	100.00%		B3L5A0              	100.00%
Bootstrap support for A8BYT1 as seed ortholog is 100%.
Bootstrap support for B3L5A0 as seed ortholog is 100%.

Group of orthologs #495. Best score 67 bits
Score difference with first non-orthologous sequence - G.intestinalis:67 P.knowlesi:67

E2RTU1              	100.00%		B3L9E9              	100.00%
Bootstrap support for E2RTU1 as seed ortholog is 100%.
Bootstrap support for B3L9E9 as seed ortholog is 100%.

Group of orthologs #496. Best score 66 bits
Score difference with first non-orthologous sequence - G.intestinalis:66 P.knowlesi:66

A8B801              	100.00%		B3L399              	100.00%
A8B4L8              	7.48%		
Bootstrap support for A8B801 as seed ortholog is 100%.
Bootstrap support for B3L399 as seed ortholog is 100%.

Group of orthologs #497. Best score 66 bits
Score difference with first non-orthologous sequence - G.intestinalis:66 P.knowlesi:66

A8BH80              	100.00%		B3L2R5              	100.00%
Bootstrap support for A8BH80 as seed ortholog is 100%.
Bootstrap support for B3L2R5 as seed ortholog is 100%.

Group of orthologs #498. Best score 66 bits
Score difference with first non-orthologous sequence - G.intestinalis:66 P.knowlesi:66

A8B8E5              	100.00%		B3L838              	100.00%
Bootstrap support for A8B8E5 as seed ortholog is 100%.
Bootstrap support for B3L838 as seed ortholog is 100%.

Group of orthologs #499. Best score 66 bits
Score difference with first non-orthologous sequence - G.intestinalis:66 P.knowlesi:22

A8BMK0              	100.00%		B3L1D1              	100.00%
Bootstrap support for A8BMK0 as seed ortholog is 100%.
Bootstrap support for B3L1D1 as seed ortholog is 83%.

Group of orthologs #500. Best score 66 bits
Score difference with first non-orthologous sequence - G.intestinalis:66 P.knowlesi:66

A8BA91              	100.00%		B3LBB5              	100.00%
Bootstrap support for A8BA91 as seed ortholog is 100%.
Bootstrap support for B3LBB5 as seed ortholog is 100%.

Group of orthologs #501. Best score 66 bits
Score difference with first non-orthologous sequence - G.intestinalis:66 P.knowlesi:66

E2RTR8              	100.00%		B3L869              	100.00%
Bootstrap support for E2RTR8 as seed ortholog is 100%.
Bootstrap support for B3L869 as seed ortholog is 100%.

Group of orthologs #502. Best score 65 bits
Score difference with first non-orthologous sequence - G.intestinalis:65 P.knowlesi:65

A8B484              	100.00%		B3L5P5              	100.00%
Bootstrap support for A8B484 as seed ortholog is 100%.
Bootstrap support for B3L5P5 as seed ortholog is 100%.

Group of orthologs #503. Best score 65 bits
Score difference with first non-orthologous sequence - G.intestinalis:65 P.knowlesi:65

E2RTT6              	100.00%		B3L8F0              	100.00%
Bootstrap support for E2RTT6 as seed ortholog is 100%.
Bootstrap support for B3L8F0 as seed ortholog is 100%.

Group of orthologs #504. Best score 64 bits
Score difference with first non-orthologous sequence - G.intestinalis:64 P.knowlesi:64

E2RTW4              	100.00%		B3L9J3              	100.00%
E2RTT4              	57.69%		
Bootstrap support for E2RTW4 as seed ortholog is 100%.
Bootstrap support for B3L9J3 as seed ortholog is 100%.

Group of orthologs #505. Best score 64 bits
Score difference with first non-orthologous sequence - G.intestinalis:64 P.knowlesi:64

A8B911              	100.00%		B3L1M2              	100.00%
Bootstrap support for A8B911 as seed ortholog is 100%.
Bootstrap support for B3L1M2 as seed ortholog is 100%.

Group of orthologs #506. Best score 64 bits
Score difference with first non-orthologous sequence - G.intestinalis:64 P.knowlesi:64

A8BM21              	100.00%		B3L4T4              	100.00%
Bootstrap support for A8BM21 as seed ortholog is 100%.
Bootstrap support for B3L4T4 as seed ortholog is 100%.

Group of orthologs #507. Best score 63 bits
Score difference with first non-orthologous sequence - G.intestinalis:63 P.knowlesi:63

A8B8I7              	100.00%		B3LA45              	100.00%
Bootstrap support for A8B8I7 as seed ortholog is 100%.
Bootstrap support for B3LA45 as seed ortholog is 100%.

Group of orthologs #508. Best score 63 bits
Score difference with first non-orthologous sequence - G.intestinalis:63 P.knowlesi:63

A8BHA1              	100.00%		B3L5P4              	100.00%
Bootstrap support for A8BHA1 as seed ortholog is 100%.
Bootstrap support for B3L5P4 as seed ortholog is 100%.

Group of orthologs #509. Best score 63 bits
Score difference with first non-orthologous sequence - G.intestinalis:63 P.knowlesi:63

A8BYY2              	100.00%		B3L9G1              	100.00%
Bootstrap support for A8BYY2 as seed ortholog is 100%.
Bootstrap support for B3L9G1 as seed ortholog is 100%.

Group of orthologs #510. Best score 63 bits
Score difference with first non-orthologous sequence - G.intestinalis:63 P.knowlesi:63

E2RTV8              	100.00%		B3LCG5              	100.00%
Bootstrap support for E2RTV8 as seed ortholog is 100%.
Bootstrap support for B3LCG5 as seed ortholog is 100%.

Group of orthologs #511. Best score 62 bits
Score difference with first non-orthologous sequence - G.intestinalis:62 P.knowlesi:62

A8BE66              	100.00%		B3L4J8              	100.00%
Bootstrap support for A8BE66 as seed ortholog is 100%.
Bootstrap support for B3L4J8 as seed ortholog is 100%.

Group of orthologs #512. Best score 62 bits
Score difference with first non-orthologous sequence - G.intestinalis:62 P.knowlesi:62

A8BMP7              	100.00%		B3L4R7              	100.00%
Bootstrap support for A8BMP7 as seed ortholog is 100%.
Bootstrap support for B3L4R7 as seed ortholog is 100%.

Group of orthologs #513. Best score 62 bits
Score difference with first non-orthologous sequence - G.intestinalis:62 P.knowlesi:62

A8BMP3              	100.00%		B3L6N2              	100.00%
Bootstrap support for A8BMP3 as seed ortholog is 100%.
Bootstrap support for B3L6N2 as seed ortholog is 100%.

Group of orthologs #514. Best score 61 bits
Score difference with first non-orthologous sequence - G.intestinalis:61 P.knowlesi:61

E2RTZ3              	100.00%		B3L582              	100.00%
A8B3I4              	29.40%		
Bootstrap support for E2RTZ3 as seed ortholog is 100%.
Bootstrap support for B3L582 as seed ortholog is 100%.

Group of orthologs #515. Best score 61 bits
Score difference with first non-orthologous sequence - G.intestinalis:61 P.knowlesi:61

A8BFH7              	100.00%		B3L201              	100.00%
Bootstrap support for A8BFH7 as seed ortholog is 100%.
Bootstrap support for B3L201 as seed ortholog is 100%.

Group of orthologs #516. Best score 61 bits
Score difference with first non-orthologous sequence - G.intestinalis:61 P.knowlesi:61

A8BLC1              	100.00%		B3L3U8              	100.00%
Bootstrap support for A8BLC1 as seed ortholog is 100%.
Bootstrap support for B3L3U8 as seed ortholog is 100%.

Group of orthologs #517. Best score 61 bits
Score difference with first non-orthologous sequence - G.intestinalis:61 P.knowlesi:61

A8B4S2              	100.00%		B3LD31              	100.00%
Bootstrap support for A8B4S2 as seed ortholog is 100%.
Bootstrap support for B3LD31 as seed ortholog is 100%.

Group of orthologs #518. Best score 60 bits
Score difference with first non-orthologous sequence - G.intestinalis:60 P.knowlesi:60

A8B4W5              	100.00%		B3L307              	100.00%
Bootstrap support for A8B4W5 as seed ortholog is 100%.
Bootstrap support for B3L307 as seed ortholog is 100%.

Group of orthologs #519. Best score 60 bits
Score difference with first non-orthologous sequence - G.intestinalis:60 P.knowlesi:60

A8BKI7              	100.00%		B3L492              	100.00%
Bootstrap support for A8BKI7 as seed ortholog is 100%.
Bootstrap support for B3L492 as seed ortholog is 100%.

Group of orthologs #520. Best score 60 bits
Score difference with first non-orthologous sequence - G.intestinalis:60 P.knowlesi:60

A8BRT6              	100.00%		B3L5K5              	100.00%
Bootstrap support for A8BRT6 as seed ortholog is 100%.
Bootstrap support for B3L5K5 as seed ortholog is 100%.

Group of orthologs #521. Best score 59 bits
Score difference with first non-orthologous sequence - G.intestinalis:59 P.knowlesi:59

A8BFV2              	100.00%		B3L9Q0              	100.00%
Bootstrap support for A8BFV2 as seed ortholog is 100%.
Bootstrap support for B3L9Q0 as seed ortholog is 100%.

Group of orthologs #522. Best score 58 bits
Score difference with first non-orthologous sequence - G.intestinalis:58 P.knowlesi:58

A8B5U6              	100.00%		B3L3C1              	100.00%
Bootstrap support for A8B5U6 as seed ortholog is 100%.
Bootstrap support for B3L3C1 as seed ortholog is 100%.

Group of orthologs #523. Best score 58 bits
Score difference with first non-orthologous sequence - G.intestinalis:58 P.knowlesi:58

A8BI74              	100.00%		B3KZ84              	100.00%
Bootstrap support for A8BI74 as seed ortholog is 100%.
Bootstrap support for B3KZ84 as seed ortholog is 100%.

Group of orthologs #524. Best score 57 bits
Score difference with first non-orthologous sequence - G.intestinalis:57 P.knowlesi:57

A8BWH4              	100.00%		B3L0T0              	100.00%
A8BT10              	67.96%		B3L0S9              	14.31%
A8BIE9              	35.23%		B3L0S4              	13.33%
A8B8H4              	27.45%		B3L0S8              	12.71%
A8B250              	13.57%		B3L0S6              	12.64%
A8BLD3              	10.18%		B3L0S3              	9.79%
Bootstrap support for A8BWH4 as seed ortholog is 100%.
Bootstrap support for B3L0T0 as seed ortholog is 100%.

Group of orthologs #525. Best score 57 bits
Score difference with first non-orthologous sequence - G.intestinalis:57 P.knowlesi:57

A8BZP8              	100.00%		B3L3B0              	100.00%
A8BZR3              	34.17%		
Bootstrap support for A8BZP8 as seed ortholog is 100%.
Bootstrap support for B3L3B0 as seed ortholog is 100%.

Group of orthologs #526. Best score 57 bits
Score difference with first non-orthologous sequence - G.intestinalis:57 P.knowlesi:57

A8BCH8              	100.00%		B3L0T1              	100.00%
Bootstrap support for A8BCH8 as seed ortholog is 100%.
Bootstrap support for B3L0T1 as seed ortholog is 100%.

Group of orthologs #527. Best score 57 bits
Score difference with first non-orthologous sequence - G.intestinalis:57 P.knowlesi:57

A8B956              	100.00%		B3L3A5              	100.00%
Bootstrap support for A8B956 as seed ortholog is 100%.
Bootstrap support for B3L3A5 as seed ortholog is 100%.

Group of orthologs #528. Best score 57 bits
Score difference with first non-orthologous sequence - G.intestinalis:57 P.knowlesi:57

A8B944              	100.00%		B3L4J9              	100.00%
Bootstrap support for A8B944 as seed ortholog is 100%.
Bootstrap support for B3L4J9 as seed ortholog is 100%.

Group of orthologs #529. Best score 57 bits
Score difference with first non-orthologous sequence - G.intestinalis:57 P.knowlesi:57

A8B9L0              	100.00%		B3L9S9              	100.00%
Bootstrap support for A8B9L0 as seed ortholog is 100%.
Bootstrap support for B3L9S9 as seed ortholog is 100%.

Group of orthologs #530. Best score 57 bits
Score difference with first non-orthologous sequence - G.intestinalis:11 P.knowlesi:57

A8B5X1              	100.00%		B3LCA4              	100.00%
Bootstrap support for A8B5X1 as seed ortholog is 62%.
Alternative seed ortholog is A8BGW7 (11 bits away from this cluster)
Bootstrap support for B3LCA4 as seed ortholog is 100%.

Group of orthologs #531. Best score 57 bits
Score difference with first non-orthologous sequence - G.intestinalis:57 P.knowlesi:57

A8BYA6              	100.00%		B3L4P5              	100.00%
Bootstrap support for A8BYA6 as seed ortholog is 100%.
Bootstrap support for B3L4P5 as seed ortholog is 100%.

Group of orthologs #532. Best score 56 bits
Score difference with first non-orthologous sequence - G.intestinalis:56 P.knowlesi:56

A8B7W8              	100.00%		B3L1F3              	100.00%
Bootstrap support for A8B7W8 as seed ortholog is 100%.
Bootstrap support for B3L1F3 as seed ortholog is 100%.

Group of orthologs #533. Best score 56 bits
Score difference with first non-orthologous sequence - G.intestinalis:56 P.knowlesi:56

A8BJN3              	100.00%		B3L105              	100.00%
Bootstrap support for A8BJN3 as seed ortholog is 100%.
Bootstrap support for B3L105 as seed ortholog is 100%.

Group of orthologs #534. Best score 56 bits
Score difference with first non-orthologous sequence - G.intestinalis:56 P.knowlesi:56

A8BRX3              	100.00%		B3L087              	100.00%
Bootstrap support for A8BRX3 as seed ortholog is 100%.
Bootstrap support for B3L087 as seed ortholog is 100%.

Group of orthologs #535. Best score 56 bits
Score difference with first non-orthologous sequence - G.intestinalis:56 P.knowlesi:56

A8BE94              	100.00%		B3L6L2              	100.00%
Bootstrap support for A8BE94 as seed ortholog is 100%.
Bootstrap support for B3L6L2 as seed ortholog is 100%.

Group of orthologs #536. Best score 54 bits
Score difference with first non-orthologous sequence - G.intestinalis:54 P.knowlesi:54

A8B232              	100.00%		B3L4R0              	100.00%
Bootstrap support for A8B232 as seed ortholog is 100%.
Bootstrap support for B3L4R0 as seed ortholog is 100%.

Group of orthologs #537. Best score 54 bits
Score difference with first non-orthologous sequence - G.intestinalis:54 P.knowlesi:54

A8BKZ7              	100.00%		B3L8R6              	100.00%
Bootstrap support for A8BKZ7 as seed ortholog is 100%.
Bootstrap support for B3L8R6 as seed ortholog is 100%.

Group of orthologs #538. Best score 54 bits
Score difference with first non-orthologous sequence - G.intestinalis:54 P.knowlesi:54

E2RU70              	100.00%		B3L6K8              	100.00%
Bootstrap support for E2RU70 as seed ortholog is 100%.
Bootstrap support for B3L6K8 as seed ortholog is 100%.

Group of orthologs #539. Best score 53 bits
Score difference with first non-orthologous sequence - G.intestinalis:53 P.knowlesi:53

A8B4Z0              	100.00%		B3L140              	100.00%
Bootstrap support for A8B4Z0 as seed ortholog is 100%.
Bootstrap support for B3L140 as seed ortholog is 100%.

Group of orthologs #540. Best score 53 bits
Score difference with first non-orthologous sequence - G.intestinalis:53 P.knowlesi:53

A8BFL3              	100.00%		B3L1A2              	100.00%
Bootstrap support for A8BFL3 as seed ortholog is 100%.
Bootstrap support for B3L1A2 as seed ortholog is 100%.

Group of orthologs #541. Best score 52 bits
Score difference with first non-orthologous sequence - G.intestinalis:52 P.knowlesi:52

A8B798              	100.00%		B3KZZ3              	100.00%
A8BBU3              	22.60%		B3LB42              	17.23%
Bootstrap support for A8B798 as seed ortholog is 100%.
Bootstrap support for B3KZZ3 as seed ortholog is 100%.

Group of orthologs #542. Best score 52 bits
Score difference with first non-orthologous sequence - G.intestinalis:52 P.knowlesi:52

A8BB65              	100.00%		B3L9B6              	100.00%
Bootstrap support for A8BB65 as seed ortholog is 100%.
Bootstrap support for B3L9B6 as seed ortholog is 100%.

Group of orthologs #543. Best score 52 bits
Score difference with first non-orthologous sequence - G.intestinalis:52 P.knowlesi:52

A8BU50              	100.00%		B3L550              	100.00%
Bootstrap support for A8BU50 as seed ortholog is 100%.
Bootstrap support for B3L550 as seed ortholog is 100%.

Group of orthologs #544. Best score 52 bits
Score difference with first non-orthologous sequence - G.intestinalis:52 P.knowlesi:52

E2RTX5              	100.00%		B3LBL0              	100.00%
Bootstrap support for E2RTX5 as seed ortholog is 100%.
Bootstrap support for B3LBL0 as seed ortholog is 100%.

Group of orthologs #545. Best score 50 bits
Score difference with first non-orthologous sequence - G.intestinalis:50 P.knowlesi:50

A8BB76              	100.00%		B3KZL3              	100.00%
Bootstrap support for A8BB76 as seed ortholog is 100%.
Bootstrap support for B3KZL3 as seed ortholog is 100%.

Group of orthologs #546. Best score 50 bits
Score difference with first non-orthologous sequence - G.intestinalis:50 P.knowlesi:50

A8B8H9              	100.00%		B3L2A8              	100.00%
Bootstrap support for A8B8H9 as seed ortholog is 100%.
Bootstrap support for B3L2A8 as seed ortholog is 100%.

Group of orthologs #547. Best score 50 bits
Score difference with first non-orthologous sequence - G.intestinalis:50 P.knowlesi:50

A8B3T9              	100.00%		B3LC69              	100.00%
Bootstrap support for A8B3T9 as seed ortholog is 100%.
Bootstrap support for B3LC69 as seed ortholog is 100%.

Group of orthologs #548. Best score 50 bits
Score difference with first non-orthologous sequence - G.intestinalis:50 P.knowlesi:50

A8BCH0              	100.00%		B3LAB0              	100.00%
Bootstrap support for A8BCH0 as seed ortholog is 100%.
Bootstrap support for B3LAB0 as seed ortholog is 100%.

Group of orthologs #549. Best score 50 bits
Score difference with first non-orthologous sequence - G.intestinalis:5 P.knowlesi:50

A8BSQ0              	100.00%		B3L3P5              	100.00%
Bootstrap support for A8BSQ0 as seed ortholog is 56%.
Alternative seed ortholog is A8B819 (5 bits away from this cluster)
Bootstrap support for B3L3P5 as seed ortholog is 100%.

Group of orthologs #550. Best score 49 bits
Score difference with first non-orthologous sequence - G.intestinalis:49 P.knowlesi:49

A8BK59              	100.00%		B3L8X2              	100.00%
                    	       		B3L4U3              	8.08%
                    	       		B3L6K2              	5.71%
Bootstrap support for A8BK59 as seed ortholog is 100%.
Bootstrap support for B3L8X2 as seed ortholog is 100%.

Group of orthologs #551. Best score 49 bits
Score difference with first non-orthologous sequence - G.intestinalis:49 P.knowlesi:49

A8BIC5              	100.00%		B3L8V7              	100.00%
A8BW22              	14.47%		
Bootstrap support for A8BIC5 as seed ortholog is 100%.
Bootstrap support for B3L8V7 as seed ortholog is 100%.

Group of orthologs #552. Best score 49 bits
Score difference with first non-orthologous sequence - G.intestinalis:49 P.knowlesi:49

A8BTA0              	100.00%		B3L4Z5              	100.00%
Bootstrap support for A8BTA0 as seed ortholog is 100%.
Bootstrap support for B3L4Z5 as seed ortholog is 100%.

Group of orthologs #553. Best score 48 bits
Score difference with first non-orthologous sequence - G.intestinalis:48 P.knowlesi:48

E2RU65              	100.00%		B3L7M3              	100.00%
                    	       		B3L8Y6              	36.59%
                    	       		B3L8Y3              	33.57%
Bootstrap support for E2RU65 as seed ortholog is 100%.
Bootstrap support for B3L7M3 as seed ortholog is 100%.

Group of orthologs #554. Best score 48 bits
Score difference with first non-orthologous sequence - G.intestinalis:48 P.knowlesi:48

A8B528              	100.00%		B3L404              	100.00%
Bootstrap support for A8B528 as seed ortholog is 100%.
Bootstrap support for B3L404 as seed ortholog is 100%.

Group of orthologs #555. Best score 48 bits
Score difference with first non-orthologous sequence - G.intestinalis:48 P.knowlesi:48

A8BRI7              	100.00%		B3LAH0              	100.00%
Bootstrap support for A8BRI7 as seed ortholog is 100%.
Bootstrap support for B3LAH0 as seed ortholog is 100%.

Group of orthologs #556. Best score 47 bits
Score difference with first non-orthologous sequence - G.intestinalis:47 P.knowlesi:47

A8BEC2              	100.00%		B3L576              	100.00%
                    	       		B3L8Y5              	11.28%
Bootstrap support for A8BEC2 as seed ortholog is 100%.
Bootstrap support for B3L576 as seed ortholog is 100%.

Group of orthologs #557. Best score 47 bits
Score difference with first non-orthologous sequence - G.intestinalis:47 P.knowlesi:47

A8BLX8              	100.00%		B3L0G8              	100.00%
Bootstrap support for A8BLX8 as seed ortholog is 100%.
Bootstrap support for B3L0G8 as seed ortholog is 100%.

Group of orthologs #558. Best score 47 bits
Score difference with first non-orthologous sequence - G.intestinalis:47 P.knowlesi:47

A8BVJ1              	100.00%		B3L355              	100.00%
Bootstrap support for A8BVJ1 as seed ortholog is 100%.
Bootstrap support for B3L355 as seed ortholog is 100%.

Group of orthologs #559. Best score 47 bits
Score difference with first non-orthologous sequence - G.intestinalis:47 P.knowlesi:47

A8BUG8              	100.00%		B3L4C6              	100.00%
Bootstrap support for A8BUG8 as seed ortholog is 100%.
Bootstrap support for B3L4C6 as seed ortholog is 100%.

Group of orthologs #560. Best score 47 bits
Score difference with first non-orthologous sequence - G.intestinalis:47 P.knowlesi:47

A8BT30              	100.00%		B3L662              	100.00%
Bootstrap support for A8BT30 as seed ortholog is 100%.
Bootstrap support for B3L662 as seed ortholog is 100%.

Group of orthologs #561. Best score 46 bits
Score difference with first non-orthologous sequence - G.intestinalis:46 P.knowlesi:46

A8BW84              	100.00%		B3L174              	100.00%
Bootstrap support for A8BW84 as seed ortholog is 100%.
Bootstrap support for B3L174 as seed ortholog is 100%.

Group of orthologs #562. Best score 45 bits
Score difference with first non-orthologous sequence - G.intestinalis:45 P.knowlesi:45

A8B4P7              	100.00%		B3L194              	100.00%
Bootstrap support for A8B4P7 as seed ortholog is 100%.
Bootstrap support for B3L194 as seed ortholog is 100%.

Group of orthologs #563. Best score 45 bits
Score difference with first non-orthologous sequence - G.intestinalis:45 P.knowlesi:45

A8BJ60              	100.00%		B3LD77              	100.00%
Bootstrap support for A8BJ60 as seed ortholog is 100%.
Bootstrap support for B3LD77 as seed ortholog is 100%.

Group of orthologs #564. Best score 44 bits
Score difference with first non-orthologous sequence - G.intestinalis:44 P.knowlesi:44

A8BFL5              	100.00%		B3L387              	100.00%
Bootstrap support for A8BFL5 as seed ortholog is 100%.
Bootstrap support for B3L387 as seed ortholog is 100%.

Group of orthologs #565. Best score 44 bits
Score difference with first non-orthologous sequence - G.intestinalis:44 P.knowlesi:44

A8B5J1              	100.00%		B3L9L7              	100.00%
Bootstrap support for A8B5J1 as seed ortholog is 100%.
Bootstrap support for B3L9L7 as seed ortholog is 100%.

Group of orthologs #566. Best score 43 bits
Score difference with first non-orthologous sequence - G.intestinalis:43 P.knowlesi:43

A8BVA7              	100.00%		B3L9L9              	100.00%
Bootstrap support for A8BVA7 as seed ortholog is 100%.
Bootstrap support for B3L9L9 as seed ortholog is 100%.

Group of orthologs #567. Best score 43 bits
Score difference with first non-orthologous sequence - G.intestinalis:43 P.knowlesi:43

E2RU32              	100.00%		B3LCD3              	100.00%
Bootstrap support for E2RU32 as seed ortholog is 100%.
Bootstrap support for B3LCD3 as seed ortholog is 100%.

Group of orthologs #568. Best score 42 bits
Score difference with first non-orthologous sequence - G.intestinalis:42 P.knowlesi:42

A8BQL0              	100.00%		B3LBA2              	100.00%
                    	       		B3L8S8              	12.45%
Bootstrap support for A8BQL0 as seed ortholog is 100%.
Bootstrap support for B3LBA2 as seed ortholog is 100%.

Group of orthologs #569. Best score 41 bits
Score difference with first non-orthologous sequence - G.intestinalis:41 P.knowlesi:41

A8BBK6              	100.00%		B3LAP2              	100.00%
Bootstrap support for A8BBK6 as seed ortholog is 100%.
Bootstrap support for B3LAP2 as seed ortholog is 100%.