###################################
1189 groups of orthologs
1888 in-paralogs from E.histolytica
1671 in-paralogs from P.ramorum
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3077 bits
Score difference with first non-orthologous sequence - E.histolytica:3077 P.ramorum:3077

C4M6K0              	100.00%		H3G8I9              	100.00%
Bootstrap support for C4M6K0 as seed ortholog is 100%.
Bootstrap support for H3G8I9 as seed ortholog is 100%.

Group of orthologs #2. Best score 1886 bits
Score difference with first non-orthologous sequence - E.histolytica:1886 P.ramorum:1886

C4LSF8              	100.00%		H3GJC4              	100.00%
Bootstrap support for C4LSF8 as seed ortholog is 100%.
Bootstrap support for H3GJC4 as seed ortholog is 100%.

Group of orthologs #3. Best score 1269 bits
Score difference with first non-orthologous sequence - E.histolytica:1269 P.ramorum:1157

C4M3E3              	100.00%		H3G9F7              	100.00%
Bootstrap support for C4M3E3 as seed ortholog is 100%.
Bootstrap support for H3G9F7 as seed ortholog is 100%.

Group of orthologs #4. Best score 1243 bits
Score difference with first non-orthologous sequence - E.histolytica:1243 P.ramorum:1243

C4M626              	100.00%		H3G8F7              	100.00%
Bootstrap support for C4M626 as seed ortholog is 100%.
Bootstrap support for H3G8F7 as seed ortholog is 100%.

Group of orthologs #5. Best score 1213 bits
Score difference with first non-orthologous sequence - E.histolytica:1213 P.ramorum:1213

C4M249              	100.00%		H3G802              	100.00%
C4LW70              	14.50%		H3GUV1              	11.02%
Bootstrap support for C4M249 as seed ortholog is 100%.
Bootstrap support for H3G802 as seed ortholog is 100%.

Group of orthologs #6. Best score 1119 bits
Score difference with first non-orthologous sequence - E.histolytica:1119 P.ramorum:293

Q6RCM0              	100.00%		H3G7M6              	100.00%
Bootstrap support for Q6RCM0 as seed ortholog is 100%.
Bootstrap support for H3G7M6 as seed ortholog is 99%.

Group of orthologs #7. Best score 1066 bits
Score difference with first non-orthologous sequence - E.histolytica:1066 P.ramorum:871

B1N3D6              	100.00%		H3G8I7              	100.00%
C4M4N3              	99.69%		
B1N306              	97.04%		
Bootstrap support for B1N3D6 as seed ortholog is 100%.
Bootstrap support for H3G8I7 as seed ortholog is 100%.

Group of orthologs #8. Best score 1017 bits
Score difference with first non-orthologous sequence - E.histolytica:1017 P.ramorum:1017

C4LXH6              	100.00%		H3H5C1              	100.00%
Bootstrap support for C4LXH6 as seed ortholog is 100%.
Bootstrap support for H3H5C1 as seed ortholog is 100%.

Group of orthologs #9. Best score 1011 bits
Score difference with first non-orthologous sequence - E.histolytica:18 P.ramorum:515

C4LY22              	100.00%		H3G7S3              	100.00%
Bootstrap support for C4LY22 as seed ortholog is 66%.
Alternative seed ortholog is C4LTC5 (18 bits away from this cluster)
Bootstrap support for H3G7S3 as seed ortholog is 100%.

Group of orthologs #10. Best score 1008 bits
Score difference with first non-orthologous sequence - E.histolytica:1008 P.ramorum:1008

C4LTD0              	100.00%		H3G6V1              	100.00%
Bootstrap support for C4LTD0 as seed ortholog is 100%.
Bootstrap support for H3G6V1 as seed ortholog is 100%.

Group of orthologs #11. Best score 971 bits
Score difference with first non-orthologous sequence - E.histolytica:971 P.ramorum:247

C4M431              	100.00%		H3GAQ3              	100.00%
B1N511              	34.54%		
Bootstrap support for C4M431 as seed ortholog is 100%.
Bootstrap support for H3GAQ3 as seed ortholog is 99%.

Group of orthologs #12. Best score 942 bits
Score difference with first non-orthologous sequence - E.histolytica:198 P.ramorum:160

C4M3S5              	100.00%		H3GB49              	100.00%
B1N486              	32.21%		H3GB15              	82.30%
C4M9V9              	32.21%		H3G9G6              	33.43%
C4M1G4              	30.25%		
C4LZ45              	28.85%		
Bootstrap support for C4M3S5 as seed ortholog is 100%.
Bootstrap support for H3GB49 as seed ortholog is 99%.

Group of orthologs #13. Best score 933 bits
Score difference with first non-orthologous sequence - E.histolytica:469 P.ramorum:337

C4LVB2              	100.00%		H3G966              	100.00%
C4MBP1              	100.00%		
Bootstrap support for C4LVB2 as seed ortholog is 100%.
Bootstrap support for C4MBP1 as seed ortholog is 100%.
Bootstrap support for H3G966 as seed ortholog is 100%.

Group of orthologs #14. Best score 932 bits
Score difference with first non-orthologous sequence - E.histolytica:932 P.ramorum:932

C4M3E6              	100.00%		H3H1S7              	100.00%
Bootstrap support for C4M3E6 as seed ortholog is 100%.
Bootstrap support for H3H1S7 as seed ortholog is 100%.

Group of orthologs #15. Best score 925 bits
Score difference with first non-orthologous sequence - E.histolytica:925 P.ramorum:925

C4MAD8              	100.00%		H3G976              	100.00%
Bootstrap support for C4MAD8 as seed ortholog is 100%.
Bootstrap support for H3G976 as seed ortholog is 100%.

Group of orthologs #16. Best score 920 bits
Score difference with first non-orthologous sequence - E.histolytica:920 P.ramorum:920

Q6IUR3              	100.00%		H3GA78              	100.00%
Bootstrap support for Q6IUR3 as seed ortholog is 100%.
Bootstrap support for H3GA78 as seed ortholog is 100%.

Group of orthologs #17. Best score 911 bits
Score difference with first non-orthologous sequence - E.histolytica:911 P.ramorum:911

C4M6P0              	100.00%		H3G7T4              	100.00%
Bootstrap support for C4M6P0 as seed ortholog is 100%.
Bootstrap support for H3G7T4 as seed ortholog is 100%.

Group of orthologs #18. Best score 906 bits
Score difference with first non-orthologous sequence - E.histolytica:906 P.ramorum:744

C4LUK7              	100.00%		H3GA07              	100.00%
Bootstrap support for C4LUK7 as seed ortholog is 100%.
Bootstrap support for H3GA07 as seed ortholog is 100%.

Group of orthologs #19. Best score 891 bits
Score difference with first non-orthologous sequence - E.histolytica:891 P.ramorum:891

C4M0E2              	100.00%		H3GAM4              	100.00%
Bootstrap support for C4M0E2 as seed ortholog is 100%.
Bootstrap support for H3GAM4 as seed ortholog is 100%.

Group of orthologs #20. Best score 873 bits
Score difference with first non-orthologous sequence - E.histolytica:873 P.ramorum:873

B1N4V0              	100.00%		H3G875              	100.00%
C4MB78              	99.25%		
B1N3X2              	99.12%		
B1N2L8              	99.12%		
B1N523              	98.75%		
B1N3R1              	98.62%		
Bootstrap support for B1N4V0 as seed ortholog is 100%.
Bootstrap support for H3G875 as seed ortholog is 100%.

Group of orthologs #21. Best score 854 bits
Score difference with first non-orthologous sequence - E.histolytica:854 P.ramorum:854

C4MAB3              	100.00%		H3G5P5              	100.00%
Bootstrap support for C4MAB3 as seed ortholog is 100%.
Bootstrap support for H3G5P5 as seed ortholog is 100%.

Group of orthologs #22. Best score 849 bits
Score difference with first non-orthologous sequence - E.histolytica:372 P.ramorum:305

C4M6S9              	100.00%		H3G987              	100.00%
Bootstrap support for C4M6S9 as seed ortholog is 100%.
Bootstrap support for H3G987 as seed ortholog is 100%.

Group of orthologs #23. Best score 826 bits
Score difference with first non-orthologous sequence - E.histolytica:826 P.ramorum:826

C4M438              	100.00%		H3G9W7              	100.00%
Bootstrap support for C4M438 as seed ortholog is 100%.
Bootstrap support for H3G9W7 as seed ortholog is 100%.

Group of orthologs #24. Best score 819 bits
Score difference with first non-orthologous sequence - E.histolytica:473 P.ramorum:373

C4M3W0              	100.00%		H3G5N7              	100.00%
C4LVN6              	66.00%		H3G523              	53.18%
C4M422              	52.85%		H3G7V5              	43.04%
C4M3B2              	47.84%		H3GAG3              	43.04%
                    	       		H3GAB2              	31.43%
                    	       		H3H425              	24.31%
Bootstrap support for C4M3W0 as seed ortholog is 100%.
Bootstrap support for H3G5N7 as seed ortholog is 100%.

Group of orthologs #25. Best score 807 bits
Score difference with first non-orthologous sequence - E.histolytica:367 P.ramorum:250

C4M010              	100.00%		H3GEP5              	100.00%
                    	       		H3H7Q1              	100.00%
                    	       		H3G6A8              	39.49%
Bootstrap support for C4M010 as seed ortholog is 100%.
Bootstrap support for H3GEP5 as seed ortholog is 100%.
Bootstrap support for H3H7Q1 as seed ortholog is 99%.

Group of orthologs #26. Best score 769 bits
Score difference with first non-orthologous sequence - E.histolytica:769 P.ramorum:769

Q24801              	100.00%		H3G8Q3              	100.00%
                    	       		H3GH88              	37.17%
Bootstrap support for Q24801 as seed ortholog is 100%.
Bootstrap support for H3G8Q3 as seed ortholog is 100%.

Group of orthologs #27. Best score 768 bits
Score difference with first non-orthologous sequence - E.histolytica:310 P.ramorum:261

C4LT60              	100.00%		H3G922              	100.00%
Bootstrap support for C4LT60 as seed ortholog is 100%.
Bootstrap support for H3G922 as seed ortholog is 99%.

Group of orthologs #28. Best score 765 bits
Score difference with first non-orthologous sequence - E.histolytica:337 P.ramorum:260

C4M5M5              	100.00%		H3G7A2              	100.00%
Bootstrap support for C4M5M5 as seed ortholog is 100%.
Bootstrap support for H3G7A2 as seed ortholog is 100%.

Group of orthologs #29. Best score 751 bits
Score difference with first non-orthologous sequence - E.histolytica:751 P.ramorum:626

Q4VSM4              	100.00%		H3GAT6              	100.00%
Bootstrap support for Q4VSM4 as seed ortholog is 100%.
Bootstrap support for H3GAT6 as seed ortholog is 100%.

Group of orthologs #30. Best score 745 bits
Score difference with first non-orthologous sequence - E.histolytica:745 P.ramorum:745

Q24802              	100.00%		H3GB02              	100.00%
Bootstrap support for Q24802 as seed ortholog is 100%.
Bootstrap support for H3GB02 as seed ortholog is 100%.

Group of orthologs #31. Best score 735 bits
Score difference with first non-orthologous sequence - E.histolytica:735 P.ramorum:642

B1N3P0              	100.00%		H3G7J9              	100.00%
Bootstrap support for B1N3P0 as seed ortholog is 100%.
Bootstrap support for H3G7J9 as seed ortholog is 100%.

Group of orthologs #32. Best score 697 bits
Score difference with first non-orthologous sequence - E.histolytica:697 P.ramorum:697

C4LUH6              	100.00%		H3G6H1              	100.00%
Bootstrap support for C4LUH6 as seed ortholog is 100%.
Bootstrap support for H3G6H1 as seed ortholog is 100%.

Group of orthologs #33. Best score 695 bits
Score difference with first non-orthologous sequence - E.histolytica:116 P.ramorum:165

C4LYN6              	100.00%		H3GBZ6              	100.00%
Bootstrap support for C4LYN6 as seed ortholog is 98%.
Bootstrap support for H3GBZ6 as seed ortholog is 99%.

Group of orthologs #34. Best score 682 bits
Score difference with first non-orthologous sequence - E.histolytica:173 P.ramorum:59

C4M8E6              	100.00%		H3GTE0              	100.00%
C4LZC7              	24.47%		
Bootstrap support for C4M8E6 as seed ortholog is 99%.
Bootstrap support for H3GTE0 as seed ortholog is 81%.

Group of orthologs #35. Best score 682 bits
Score difference with first non-orthologous sequence - E.histolytica:243 P.ramorum:353

C4M1F1              	100.00%		H3G5Z1              	100.00%
Bootstrap support for C4M1F1 as seed ortholog is 99%.
Bootstrap support for H3G5Z1 as seed ortholog is 100%.

Group of orthologs #36. Best score 680 bits
Score difference with first non-orthologous sequence - E.histolytica:680 P.ramorum:224

C4LUC7              	100.00%		H3GHD9              	100.00%
Bootstrap support for C4LUC7 as seed ortholog is 100%.
Bootstrap support for H3GHD9 as seed ortholog is 99%.

Group of orthologs #37. Best score 674 bits
Score difference with first non-orthologous sequence - E.histolytica:518 P.ramorum:674

Q1EQ29              	100.00%		H3G6X8              	100.00%
Bootstrap support for Q1EQ29 as seed ortholog is 100%.
Bootstrap support for H3G6X8 as seed ortholog is 100%.

Group of orthologs #38. Best score 672 bits
Score difference with first non-orthologous sequence - E.histolytica:672 P.ramorum:426

C4LY19              	100.00%		H3H0Y2              	100.00%
Bootstrap support for C4LY19 as seed ortholog is 100%.
Bootstrap support for H3H0Y2 as seed ortholog is 100%.

Group of orthologs #39. Best score 671 bits
Score difference with first non-orthologous sequence - E.histolytica:503 P.ramorum:356

C4M7D4              	100.00%		H3G8M4              	100.00%
C4MAC9              	98.18%		H3G8L8              	99.10%
Bootstrap support for C4M7D4 as seed ortholog is 100%.
Bootstrap support for H3G8M4 as seed ortholog is 100%.

Group of orthologs #40. Best score 661 bits
Score difference with first non-orthologous sequence - E.histolytica:205 P.ramorum:340

C4M3X0              	100.00%		H3GQ90              	100.00%
C4M2K1              	79.82%		H3GRQ9              	55.27%
                    	       		H3G822              	9.71%
Bootstrap support for C4M3X0 as seed ortholog is 99%.
Bootstrap support for H3GQ90 as seed ortholog is 100%.

Group of orthologs #41. Best score 659 bits
Score difference with first non-orthologous sequence - E.histolytica:312 P.ramorum:247

B1N2P0              	100.00%		H3G9B9              	100.00%
B1N621              	17.76%		H3G9B8              	35.92%
Bootstrap support for B1N2P0 as seed ortholog is 100%.
Bootstrap support for H3G9B9 as seed ortholog is 100%.

Group of orthologs #42. Best score 654 bits
Score difference with first non-orthologous sequence - E.histolytica:166 P.ramorum:68

C4LW20              	100.00%		H3GQ80              	100.00%
                    	       		H3G823              	29.67%
Bootstrap support for C4LW20 as seed ortholog is 100%.
Bootstrap support for H3GQ80 as seed ortholog is 80%.

Group of orthologs #43. Best score 653 bits
Score difference with first non-orthologous sequence - E.histolytica:27 P.ramorum:320

B1N2V8              	100.00%		H3GA38              	100.00%
Bootstrap support for B1N2V8 as seed ortholog is 72%.
Alternative seed ortholog is Q1EQ27 (27 bits away from this cluster)
Bootstrap support for H3GA38 as seed ortholog is 100%.

Group of orthologs #44. Best score 652 bits
Score difference with first non-orthologous sequence - E.histolytica:652 P.ramorum:652

C4M5S9              	100.00%		H3G8E9              	100.00%
B1N3E8              	55.29%		
Bootstrap support for C4M5S9 as seed ortholog is 100%.
Bootstrap support for H3G8E9 as seed ortholog is 100%.

Group of orthologs #45. Best score 638 bits
Score difference with first non-orthologous sequence - E.histolytica:466 P.ramorum:160

C4M7T9              	100.00%		H3G877              	100.00%
Bootstrap support for C4M7T9 as seed ortholog is 100%.
Bootstrap support for H3G877 as seed ortholog is 99%.

Group of orthologs #46. Best score 637 bits
Score difference with first non-orthologous sequence - E.histolytica:637 P.ramorum:510

B1N373              	100.00%		H3G917              	100.00%
C4M7P1              	99.69%		
Bootstrap support for B1N373 as seed ortholog is 100%.
Bootstrap support for H3G917 as seed ortholog is 100%.

Group of orthologs #47. Best score 637 bits
Score difference with first non-orthologous sequence - E.histolytica:637 P.ramorum:637

C4M777              	100.00%		H3GHV9              	100.00%
Bootstrap support for C4M777 as seed ortholog is 100%.
Bootstrap support for H3GHV9 as seed ortholog is 100%.

Group of orthologs #48. Best score 634 bits
Score difference with first non-orthologous sequence - E.histolytica:405 P.ramorum:634

C4LW96              	100.00%		H3G9K3              	100.00%
Bootstrap support for C4LW96 as seed ortholog is 100%.
Bootstrap support for H3G9K3 as seed ortholog is 100%.

Group of orthologs #49. Best score 627 bits
Score difference with first non-orthologous sequence - E.histolytica:627 P.ramorum:627

C4M7V7              	100.00%		H3GD17              	100.00%
Bootstrap support for C4M7V7 as seed ortholog is 100%.
Bootstrap support for H3GD17 as seed ortholog is 100%.

Group of orthologs #50. Best score 620 bits
Score difference with first non-orthologous sequence - E.histolytica:157 P.ramorum:199

C4M7P3              	100.00%		H3GCX9              	100.00%
Bootstrap support for C4M7P3 as seed ortholog is 99%.
Bootstrap support for H3GCX9 as seed ortholog is 99%.

Group of orthologs #51. Best score 619 bits
Score difference with first non-orthologous sequence - E.histolytica:619 P.ramorum:619

C4M2E4              	100.00%		H3GB16              	100.00%
Bootstrap support for C4M2E4 as seed ortholog is 100%.
Bootstrap support for H3GB16 as seed ortholog is 100%.

Group of orthologs #52. Best score 618 bits
Score difference with first non-orthologous sequence - E.histolytica:14 P.ramorum:134

C4M0V2              	100.00%		H3GKM1              	100.00%
                    	       		H3HD38              	5.43%
Bootstrap support for C4M0V2 as seed ortholog is 56%.
Alternative seed ortholog is B1N2M5 (14 bits away from this cluster)
Bootstrap support for H3GKM1 as seed ortholog is 97%.

Group of orthologs #53. Best score 618 bits
Score difference with first non-orthologous sequence - E.histolytica:618 P.ramorum:618

C4LX06              	100.00%		H3G6Q2              	100.00%
Bootstrap support for C4LX06 as seed ortholog is 100%.
Bootstrap support for H3G6Q2 as seed ortholog is 100%.

Group of orthologs #54. Best score 617 bits
Score difference with first non-orthologous sequence - E.histolytica:173 P.ramorum:138

C4LWD6              	100.00%		H3G933              	100.00%
Bootstrap support for C4LWD6 as seed ortholog is 99%.
Bootstrap support for H3G933 as seed ortholog is 99%.

Group of orthologs #55. Best score 614 bits
Score difference with first non-orthologous sequence - E.histolytica:614 P.ramorum:614

C4LVL5              	100.00%		H3GR76              	100.00%
Bootstrap support for C4LVL5 as seed ortholog is 100%.
Bootstrap support for H3GR76 as seed ortholog is 100%.

Group of orthologs #56. Best score 606 bits
Score difference with first non-orthologous sequence - E.histolytica:606 P.ramorum:606

C4M759              	100.00%		H3G7T2              	100.00%
B1N2H1              	81.25%		
Bootstrap support for C4M759 as seed ortholog is 100%.
Bootstrap support for H3G7T2 as seed ortholog is 100%.

Group of orthologs #57. Best score 595 bits
Score difference with first non-orthologous sequence - E.histolytica:595 P.ramorum:595

C4LW75              	100.00%		H3G982              	100.00%
Bootstrap support for C4LW75 as seed ortholog is 100%.
Bootstrap support for H3G982 as seed ortholog is 100%.

Group of orthologs #58. Best score 592 bits
Score difference with first non-orthologous sequence - E.histolytica:512 P.ramorum:259

C4LZY3              	100.00%		H3G6R8              	100.00%
Bootstrap support for C4LZY3 as seed ortholog is 100%.
Bootstrap support for H3G6R8 as seed ortholog is 99%.

Group of orthologs #59. Best score 592 bits
Score difference with first non-orthologous sequence - E.histolytica:300 P.ramorum:592

C4MA02              	100.00%		H3G9Y5              	100.00%
Bootstrap support for C4MA02 as seed ortholog is 99%.
Bootstrap support for H3G9Y5 as seed ortholog is 100%.

Group of orthologs #60. Best score 583 bits
Score difference with first non-orthologous sequence - E.histolytica:225 P.ramorum:583

C4M2F5              	100.00%		H3G5Z2              	100.00%
Bootstrap support for C4M2F5 as seed ortholog is 99%.
Bootstrap support for H3G5Z2 as seed ortholog is 100%.

Group of orthologs #61. Best score 581 bits
Score difference with first non-orthologous sequence - E.histolytica:581 P.ramorum:415

C4M285              	100.00%		H3G8K6              	100.00%
Bootstrap support for C4M285 as seed ortholog is 100%.
Bootstrap support for H3G8K6 as seed ortholog is 100%.

Group of orthologs #62. Best score 578 bits
Score difference with first non-orthologous sequence - E.histolytica:578 P.ramorum:578

C4LU18              	100.00%		H3G8U2              	100.00%
Bootstrap support for C4LU18 as seed ortholog is 100%.
Bootstrap support for H3G8U2 as seed ortholog is 100%.

Group of orthologs #63. Best score 574 bits
Score difference with first non-orthologous sequence - E.histolytica:574 P.ramorum:574

C4M1X5              	100.00%		H3HC97              	100.00%
Bootstrap support for C4M1X5 as seed ortholog is 100%.
Bootstrap support for H3HC97 as seed ortholog is 100%.

Group of orthologs #64. Best score 571 bits
Score difference with first non-orthologous sequence - E.histolytica:571 P.ramorum:571

C4LVH2              	100.00%		H3G897              	100.00%
Bootstrap support for C4LVH2 as seed ortholog is 100%.
Bootstrap support for H3G897 as seed ortholog is 100%.

Group of orthologs #65. Best score 568 bits
Score difference with first non-orthologous sequence - E.histolytica:568 P.ramorum:400

C4MAJ9              	100.00%		H3GUH6              	100.00%
Bootstrap support for C4MAJ9 as seed ortholog is 100%.
Bootstrap support for H3GUH6 as seed ortholog is 100%.

Group of orthologs #66. Best score 567 bits
Score difference with first non-orthologous sequence - E.histolytica:567 P.ramorum:567

C4M419              	100.00%		H3GA85              	100.00%
Bootstrap support for C4M419 as seed ortholog is 100%.
Bootstrap support for H3GA85 as seed ortholog is 100%.

Group of orthologs #67. Best score 566 bits
Score difference with first non-orthologous sequence - E.histolytica:566 P.ramorum:566

C4LS82              	100.00%		H3GCJ1              	100.00%
C4M5P8              	85.07%		H3H8M5              	70.06%
Bootstrap support for C4LS82 as seed ortholog is 100%.
Bootstrap support for H3GCJ1 as seed ortholog is 100%.

Group of orthologs #68. Best score 564 bits
Score difference with first non-orthologous sequence - E.histolytica:325 P.ramorum:564

C4LYN5              	100.00%		H3G6I6              	100.00%
Bootstrap support for C4LYN5 as seed ortholog is 100%.
Bootstrap support for H3G6I6 as seed ortholog is 100%.

Group of orthologs #69. Best score 564 bits
Score difference with first non-orthologous sequence - E.histolytica:564 P.ramorum:564

C4LTG1              	100.00%		H3HBF0              	100.00%
Bootstrap support for C4LTG1 as seed ortholog is 100%.
Bootstrap support for H3HBF0 as seed ortholog is 100%.

Group of orthologs #70. Best score 559 bits
Score difference with first non-orthologous sequence - E.histolytica:559 P.ramorum:389

C4M846              	100.00%		H3GLH3              	100.00%
B1N4Q6              	99.25%		
Bootstrap support for C4M846 as seed ortholog is 100%.
Bootstrap support for H3GLH3 as seed ortholog is 100%.

Group of orthologs #71. Best score 554 bits
Score difference with first non-orthologous sequence - E.histolytica:354 P.ramorum:554

C4LYY1              	100.00%		H3GAJ9              	100.00%
Bootstrap support for C4LYY1 as seed ortholog is 100%.
Bootstrap support for H3GAJ9 as seed ortholog is 100%.

Group of orthologs #72. Best score 549 bits
Score difference with first non-orthologous sequence - E.histolytica:293 P.ramorum:549

C4LUJ0              	100.00%		H3GAD7              	100.00%
C4LYA3              	54.76%		
Bootstrap support for C4LUJ0 as seed ortholog is 100%.
Bootstrap support for H3GAD7 as seed ortholog is 100%.

Group of orthologs #73. Best score 549 bits
Score difference with first non-orthologous sequence - E.histolytica:549 P.ramorum:460

C4MAU7              	100.00%		H3G8J5              	100.00%
Bootstrap support for C4MAU7 as seed ortholog is 100%.
Bootstrap support for H3G8J5 as seed ortholog is 100%.

Group of orthologs #74. Best score 546 bits
Score difference with first non-orthologous sequence - E.histolytica:184 P.ramorum:546

Q1EQ31              	100.00%		H3G9M7              	100.00%
Bootstrap support for Q1EQ31 as seed ortholog is 99%.
Bootstrap support for H3G9M7 as seed ortholog is 100%.

Group of orthologs #75. Best score 546 bits
Score difference with first non-orthologous sequence - E.histolytica:546 P.ramorum:546

C4M2G9              	100.00%		H3GKZ2              	100.00%
Bootstrap support for C4M2G9 as seed ortholog is 100%.
Bootstrap support for H3GKZ2 as seed ortholog is 100%.

Group of orthologs #76. Best score 544 bits
Score difference with first non-orthologous sequence - E.histolytica:544 P.ramorum:314

C4LXL0              	100.00%		H3G8E4              	100.00%
Bootstrap support for C4LXL0 as seed ortholog is 100%.
Bootstrap support for H3G8E4 as seed ortholog is 100%.

Group of orthologs #77. Best score 541 bits
Score difference with first non-orthologous sequence - E.histolytica:541 P.ramorum:378

C4LY36              	100.00%		H3HD78              	100.00%
Bootstrap support for C4LY36 as seed ortholog is 100%.
Bootstrap support for H3HD78 as seed ortholog is 100%.

Group of orthologs #78. Best score 540 bits
Score difference with first non-orthologous sequence - E.histolytica:146 P.ramorum:254

C4LUQ2              	100.00%		H3GCT4              	100.00%
Bootstrap support for C4LUQ2 as seed ortholog is 99%.
Bootstrap support for H3GCT4 as seed ortholog is 99%.

Group of orthologs #79. Best score 540 bits
Score difference with first non-orthologous sequence - E.histolytica:540 P.ramorum:540

C4M9H9              	100.00%		H3GGH5              	100.00%
Bootstrap support for C4M9H9 as seed ortholog is 100%.
Bootstrap support for H3GGH5 as seed ortholog is 100%.

Group of orthologs #80. Best score 535 bits
Score difference with first non-orthologous sequence - E.histolytica:263 P.ramorum:121

C4MB40              	100.00%		H3GSI3              	100.00%
B1N3S5              	66.24%		
C4M8Q3              	20.86%		
Bootstrap support for C4MB40 as seed ortholog is 100%.
Bootstrap support for H3GSI3 as seed ortholog is 99%.

Group of orthologs #81. Best score 530 bits
Score difference with first non-orthologous sequence - E.histolytica:530 P.ramorum:530

C4M8E1              	100.00%		H3G970              	100.00%
Bootstrap support for C4M8E1 as seed ortholog is 100%.
Bootstrap support for H3G970 as seed ortholog is 100%.

Group of orthologs #82. Best score 529 bits
Score difference with first non-orthologous sequence - E.histolytica:68 P.ramorum:163

C4LTA8              	100.00%		H3GSL8              	100.00%
                    	       		H3GTJ9              	14.87%
Bootstrap support for C4LTA8 as seed ortholog is 94%.
Bootstrap support for H3GSL8 as seed ortholog is 99%.

Group of orthologs #83. Best score 528 bits
Score difference with first non-orthologous sequence - E.histolytica:328 P.ramorum:209

C4LXN8              	100.00%		H3G7N9              	100.00%
Bootstrap support for C4LXN8 as seed ortholog is 100%.
Bootstrap support for H3G7N9 as seed ortholog is 99%.

Group of orthologs #84. Best score 519 bits
Score difference with first non-orthologous sequence - E.histolytica:339 P.ramorum:253

C4M8U4              	100.00%		H3G649              	100.00%
                    	       		H3HAD9              	14.66%
Bootstrap support for C4M8U4 as seed ortholog is 100%.
Bootstrap support for H3G649 as seed ortholog is 100%.

Group of orthologs #85. Best score 518 bits
Score difference with first non-orthologous sequence - E.histolytica:518 P.ramorum:518

C4LVW6              	100.00%		H3G985              	100.00%
Bootstrap support for C4LVW6 as seed ortholog is 100%.
Bootstrap support for H3G985 as seed ortholog is 100%.

Group of orthologs #86. Best score 517 bits
Score difference with first non-orthologous sequence - E.histolytica:517 P.ramorum:517

C4LZL9              	100.00%		H3G9G8              	100.00%
Bootstrap support for C4LZL9 as seed ortholog is 100%.
Bootstrap support for H3G9G8 as seed ortholog is 100%.

Group of orthologs #87. Best score 517 bits
Score difference with first non-orthologous sequence - E.histolytica:517 P.ramorum:517

C4MB71              	100.00%		H3G9B0              	100.00%
Bootstrap support for C4MB71 as seed ortholog is 100%.
Bootstrap support for H3G9B0 as seed ortholog is 100%.

Group of orthologs #88. Best score 515 bits
Score difference with first non-orthologous sequence - E.histolytica:314 P.ramorum:515

C4M2D0              	100.00%		H3G6K6              	100.00%
Bootstrap support for C4M2D0 as seed ortholog is 100%.
Bootstrap support for H3G6K6 as seed ortholog is 100%.

Group of orthologs #89. Best score 514 bits
Score difference with first non-orthologous sequence - E.histolytica:514 P.ramorum:346

C4LWB7              	100.00%		H3G6U9              	100.00%
Bootstrap support for C4LWB7 as seed ortholog is 100%.
Bootstrap support for H3G6U9 as seed ortholog is 100%.

Group of orthologs #90. Best score 513 bits
Score difference with first non-orthologous sequence - E.histolytica:294 P.ramorum:402

C4LYU0              	100.00%		H3G7E9              	100.00%
C4M2N0              	94.09%		H3G9Y4              	100.00%
                    	       		H3G9X9              	85.89%
                    	       		H3G7E7              	85.64%
                    	       		H3G9Y0              	82.31%
                    	       		H3GAV8              	75.90%
                    	       		H3GB62              	20.79%
Bootstrap support for C4LYU0 as seed ortholog is 100%.
Bootstrap support for H3G7E9 as seed ortholog is 100%.
Bootstrap support for H3G9Y4 as seed ortholog is 100%.

Group of orthologs #91. Best score 513 bits
Score difference with first non-orthologous sequence - E.histolytica:513 P.ramorum:513

C4M2G5              	100.00%		H3G8X0              	100.00%
Bootstrap support for C4M2G5 as seed ortholog is 100%.
Bootstrap support for H3G8X0 as seed ortholog is 100%.

Group of orthologs #92. Best score 512 bits
Score difference with first non-orthologous sequence - E.histolytica:512 P.ramorum:512

Q1EQ50              	100.00%		H3G930              	100.00%
Q1EQ49              	16.18%		
Bootstrap support for Q1EQ50 as seed ortholog is 100%.
Bootstrap support for H3G930 as seed ortholog is 100%.

Group of orthologs #93. Best score 510 bits
Score difference with first non-orthologous sequence - E.histolytica:510 P.ramorum:510

C4LX84              	100.00%		H3GAE1              	100.00%
C4M3R5              	7.18%		
Bootstrap support for C4LX84 as seed ortholog is 100%.
Bootstrap support for H3GAE1 as seed ortholog is 100%.

Group of orthologs #94. Best score 507 bits
Score difference with first non-orthologous sequence - E.histolytica:507 P.ramorum:507

C4LSV8              	100.00%		H3G9F4              	100.00%
Bootstrap support for C4LSV8 as seed ortholog is 100%.
Bootstrap support for H3G9F4 as seed ortholog is 100%.

Group of orthologs #95. Best score 505 bits
Score difference with first non-orthologous sequence - E.histolytica:505 P.ramorum:113

C4LU72              	100.00%		H3GLV4              	100.00%
                    	       		H3GWW2              	10.76%
                    	       		H3GED2              	9.03%
                    	       		H3H2D8              	5.07%
Bootstrap support for C4LU72 as seed ortholog is 100%.
Bootstrap support for H3GLV4 as seed ortholog is 94%.

Group of orthologs #96. Best score 503 bits
Score difference with first non-orthologous sequence - E.histolytica:503 P.ramorum:503

C4M818              	100.00%		H3G8E5              	100.00%
B1N3S8              	92.69%		
C4MAC4              	56.35%		
B1N5J9              	51.32%		
Bootstrap support for C4M818 as seed ortholog is 100%.
Bootstrap support for H3G8E5 as seed ortholog is 100%.

Group of orthologs #97. Best score 502 bits
Score difference with first non-orthologous sequence - E.histolytica:502 P.ramorum:502

C4M272              	100.00%		H3GA19              	100.00%
B1N3M4              	86.60%		
B1N378              	83.01%		
Bootstrap support for C4M272 as seed ortholog is 100%.
Bootstrap support for H3GA19 as seed ortholog is 100%.

Group of orthologs #98. Best score 501 bits
Score difference with first non-orthologous sequence - E.histolytica:194 P.ramorum:501

C4LZR4              	100.00%		H3G7Y5              	100.00%
Bootstrap support for C4LZR4 as seed ortholog is 99%.
Bootstrap support for H3G7Y5 as seed ortholog is 100%.

Group of orthologs #99. Best score 501 bits
Score difference with first non-orthologous sequence - E.histolytica:501 P.ramorum:501

C4M7P4              	100.00%		H3G952              	100.00%
Bootstrap support for C4M7P4 as seed ortholog is 100%.
Bootstrap support for H3G952 as seed ortholog is 100%.

Group of orthologs #100. Best score 497 bits
Score difference with first non-orthologous sequence - E.histolytica:497 P.ramorum:497

C4M3Z6              	100.00%		H3G9E8              	100.00%
Bootstrap support for C4M3Z6 as seed ortholog is 100%.
Bootstrap support for H3G9E8 as seed ortholog is 100%.

Group of orthologs #101. Best score 495 bits
Score difference with first non-orthologous sequence - E.histolytica:495 P.ramorum:358

C4LXE8              	100.00%		H3GAG9              	100.00%
                    	       		H3GAT5              	6.67%
Bootstrap support for C4LXE8 as seed ortholog is 100%.
Bootstrap support for H3GAG9 as seed ortholog is 100%.

Group of orthologs #102. Best score 495 bits
Score difference with first non-orthologous sequence - E.histolytica:252 P.ramorum:315

C4LZW8              	100.00%		H3HAM1              	100.00%
Bootstrap support for C4LZW8 as seed ortholog is 100%.
Bootstrap support for H3HAM1 as seed ortholog is 100%.

Group of orthologs #103. Best score 490 bits
Score difference with first non-orthologous sequence - E.histolytica:490 P.ramorum:357

C4M7X2              	100.00%		H3G8G8              	100.00%
Bootstrap support for C4M7X2 as seed ortholog is 100%.
Bootstrap support for H3G8G8 as seed ortholog is 100%.

Group of orthologs #104. Best score 487 bits
Score difference with first non-orthologous sequence - E.histolytica:225 P.ramorum:487

C4LXY5              	100.00%		H3G5R3              	100.00%
Bootstrap support for C4LXY5 as seed ortholog is 99%.
Bootstrap support for H3G5R3 as seed ortholog is 100%.

Group of orthologs #105. Best score 485 bits
Score difference with first non-orthologous sequence - E.histolytica:485 P.ramorum:485

C4M9R3              	100.00%		H3GTR2              	100.00%
Bootstrap support for C4M9R3 as seed ortholog is 100%.
Bootstrap support for H3GTR2 as seed ortholog is 100%.

Group of orthologs #106. Best score 483 bits
Score difference with first non-orthologous sequence - E.histolytica:51 P.ramorum:215

C4M394              	100.00%		H3GA17              	100.00%
                    	       		H3G926              	23.75%
Bootstrap support for C4M394 as seed ortholog is 96%.
Bootstrap support for H3GA17 as seed ortholog is 100%.

Group of orthologs #107. Best score 481 bits
Score difference with first non-orthologous sequence - E.histolytica:481 P.ramorum:481

C4LUG9              	100.00%		H3G5U5              	100.00%
Bootstrap support for C4LUG9 as seed ortholog is 100%.
Bootstrap support for H3G5U5 as seed ortholog is 100%.

Group of orthologs #108. Best score 478 bits
Score difference with first non-orthologous sequence - E.histolytica:478 P.ramorum:195

C4LSP0              	100.00%		H3G5J3              	100.00%
Bootstrap support for C4LSP0 as seed ortholog is 100%.
Bootstrap support for H3G5J3 as seed ortholog is 100%.

Group of orthologs #109. Best score 478 bits
Score difference with first non-orthologous sequence - E.histolytica:478 P.ramorum:327

C4M3C0              	100.00%		H3G8D8              	100.00%
Bootstrap support for C4M3C0 as seed ortholog is 100%.
Bootstrap support for H3G8D8 as seed ortholog is 100%.

Group of orthologs #110. Best score 477 bits
Score difference with first non-orthologous sequence - E.histolytica:150 P.ramorum:13

C4LWH4              	100.00%		H3GVB0              	100.00%
B1N3G4              	15.53%		
C4M195              	9.34%		
C4MA58              	8.63%		
Bootstrap support for C4LWH4 as seed ortholog is 99%.
Bootstrap support for H3GVB0 as seed ortholog is 52%.
Alternative seed ortholog is H3GHA0 (13 bits away from this cluster)

Group of orthologs #111. Best score 470 bits
Score difference with first non-orthologous sequence - E.histolytica:271 P.ramorum:470

Q6R8Y2              	100.00%		H3G7X1              	100.00%
Bootstrap support for Q6R8Y2 as seed ortholog is 100%.
Bootstrap support for H3G7X1 as seed ortholog is 100%.

Group of orthologs #112. Best score 469 bits
Score difference with first non-orthologous sequence - E.histolytica:293 P.ramorum:251

C4LWT9              	100.00%		H3GAT7              	100.00%
Bootstrap support for C4LWT9 as seed ortholog is 100%.
Bootstrap support for H3GAT7 as seed ortholog is 100%.

Group of orthologs #113. Best score 469 bits
Score difference with first non-orthologous sequence - E.histolytica:469 P.ramorum:469

C4M6A4              	100.00%		H3G968              	100.00%
Bootstrap support for C4M6A4 as seed ortholog is 100%.
Bootstrap support for H3G968 as seed ortholog is 100%.

Group of orthologs #114. Best score 466 bits
Score difference with first non-orthologous sequence - E.histolytica:466 P.ramorum:466

C4LW09              	100.00%		H3G9A1              	100.00%
B1N4Y7              	69.08%		
Bootstrap support for C4LW09 as seed ortholog is 100%.
Bootstrap support for H3G9A1 as seed ortholog is 100%.

Group of orthologs #115. Best score 466 bits
Score difference with first non-orthologous sequence - E.histolytica:213 P.ramorum:337

C4LWA8              	100.00%		H3G6S6              	100.00%
Bootstrap support for C4LWA8 as seed ortholog is 99%.
Bootstrap support for H3G6S6 as seed ortholog is 100%.

Group of orthologs #116. Best score 462 bits
Score difference with first non-orthologous sequence - E.histolytica:347 P.ramorum:225

C4M3B1              	100.00%		H3H1Y7              	100.00%
Bootstrap support for C4M3B1 as seed ortholog is 100%.
Bootstrap support for H3H1Y7 as seed ortholog is 100%.

Group of orthologs #117. Best score 459 bits
Score difference with first non-orthologous sequence - E.histolytica:459 P.ramorum:349

C4LSV2              	100.00%		H3G7R1              	100.00%
B1N3L7              	73.78%		
C4M131              	72.55%		
Bootstrap support for C4LSV2 as seed ortholog is 100%.
Bootstrap support for H3G7R1 as seed ortholog is 100%.

Group of orthologs #118. Best score 459 bits
Score difference with first non-orthologous sequence - E.histolytica:309 P.ramorum:459

C4LYS4              	100.00%		H3H0Z5              	100.00%
Bootstrap support for C4LYS4 as seed ortholog is 100%.
Bootstrap support for H3H0Z5 as seed ortholog is 100%.

Group of orthologs #119. Best score 458 bits
Score difference with first non-orthologous sequence - E.histolytica:458 P.ramorum:458

C4M3N9              	100.00%		H3G6Z8              	100.00%
Bootstrap support for C4M3N9 as seed ortholog is 100%.
Bootstrap support for H3G6Z8 as seed ortholog is 100%.

Group of orthologs #120. Best score 458 bits
Score difference with first non-orthologous sequence - E.histolytica:458 P.ramorum:126

C4M192              	100.00%		H3GAQ8              	100.00%
Bootstrap support for C4M192 as seed ortholog is 100%.
Bootstrap support for H3GAQ8 as seed ortholog is 99%.

Group of orthologs #121. Best score 457 bits
Score difference with first non-orthologous sequence - E.histolytica:457 P.ramorum:254

C4M1R9              	100.00%		H3G7L4              	100.00%
Bootstrap support for C4M1R9 as seed ortholog is 100%.
Bootstrap support for H3G7L4 as seed ortholog is 100%.

Group of orthologs #122. Best score 456 bits
Score difference with first non-orthologous sequence - E.histolytica:176 P.ramorum:288

C4M8D7              	100.00%		H3G4Y1              	100.00%
B1N4G1              	79.57%		
Bootstrap support for C4M8D7 as seed ortholog is 100%.
Bootstrap support for H3G4Y1 as seed ortholog is 100%.

Group of orthologs #123. Best score 453 bits
Score difference with first non-orthologous sequence - E.histolytica:453 P.ramorum:453

C4LU66              	100.00%		H3HD79              	100.00%
Bootstrap support for C4LU66 as seed ortholog is 100%.
Bootstrap support for H3HD79 as seed ortholog is 100%.

Group of orthologs #124. Best score 450 bits
Score difference with first non-orthologous sequence - E.histolytica:450 P.ramorum:450

C4M5N2              	100.00%		H3G5Z0              	100.00%
Bootstrap support for C4M5N2 as seed ortholog is 100%.
Bootstrap support for H3G5Z0 as seed ortholog is 100%.

Group of orthologs #125. Best score 449 bits
Score difference with first non-orthologous sequence - E.histolytica:202 P.ramorum:449

C4LT46              	100.00%		H3G870              	100.00%
Bootstrap support for C4LT46 as seed ortholog is 100%.
Bootstrap support for H3G870 as seed ortholog is 100%.

Group of orthologs #126. Best score 449 bits
Score difference with first non-orthologous sequence - E.histolytica:246 P.ramorum:228

C4LVA7              	100.00%		H3G6T5              	100.00%
Bootstrap support for C4LVA7 as seed ortholog is 100%.
Bootstrap support for H3G6T5 as seed ortholog is 100%.

Group of orthologs #127. Best score 449 bits
Score difference with first non-orthologous sequence - E.histolytica:449 P.ramorum:449

C4LVK4              	100.00%		H3GAS2              	100.00%
Bootstrap support for C4LVK4 as seed ortholog is 100%.
Bootstrap support for H3GAS2 as seed ortholog is 100%.

Group of orthologs #128. Best score 448 bits
Score difference with first non-orthologous sequence - E.histolytica:448 P.ramorum:189

Q1EQ17              	100.00%		H3G9G0              	100.00%
B1N4M5              	11.58%		
Bootstrap support for Q1EQ17 as seed ortholog is 100%.
Bootstrap support for H3G9G0 as seed ortholog is 100%.

Group of orthologs #129. Best score 446 bits
Score difference with first non-orthologous sequence - E.histolytica:200 P.ramorum:167

C4M5I6              	100.00%		H3G9P8              	100.00%
Bootstrap support for C4M5I6 as seed ortholog is 100%.
Bootstrap support for H3G9P8 as seed ortholog is 99%.

Group of orthologs #130. Best score 445 bits
Score difference with first non-orthologous sequence - E.histolytica:445 P.ramorum:445

O15782              	100.00%		H3G9C4              	100.00%
Bootstrap support for O15782 as seed ortholog is 100%.
Bootstrap support for H3G9C4 as seed ortholog is 100%.

Group of orthologs #131. Best score 444 bits
Score difference with first non-orthologous sequence - E.histolytica:444 P.ramorum:273

C4LVR9              	100.00%		H3G963              	100.00%
                    	       		H3G964              	93.17%
                    	       		H3G695              	90.36%
Bootstrap support for C4LVR9 as seed ortholog is 100%.
Bootstrap support for H3G963 as seed ortholog is 100%.

Group of orthologs #132. Best score 444 bits
Score difference with first non-orthologous sequence - E.histolytica:332 P.ramorum:337

B1N309              	100.00%		H3GAL0              	100.00%
C4M1Y2              	99.77%		
Bootstrap support for B1N309 as seed ortholog is 100%.
Bootstrap support for H3GAL0 as seed ortholog is 100%.

Group of orthologs #133. Best score 444 bits
Score difference with first non-orthologous sequence - E.histolytica:266 P.ramorum:36

C4M1V7              	100.00%		H3G9P7              	100.00%
Bootstrap support for C4M1V7 as seed ortholog is 99%.
Bootstrap support for H3G9P7 as seed ortholog is 71%.
Alternative seed ortholog is H3GAX1 (36 bits away from this cluster)

Group of orthologs #134. Best score 441 bits
Score difference with first non-orthologous sequence - E.histolytica:95 P.ramorum:100

C4M8N6              	100.00%		H3G5V7              	100.00%
Bootstrap support for C4M8N6 as seed ortholog is 99%.
Bootstrap support for H3G5V7 as seed ortholog is 99%.

Group of orthologs #135. Best score 438 bits
Score difference with first non-orthologous sequence - E.histolytica:438 P.ramorum:438

C4M7C7              	100.00%		H3G632              	100.00%
Bootstrap support for C4M7C7 as seed ortholog is 100%.
Bootstrap support for H3G632 as seed ortholog is 100%.

Group of orthologs #136. Best score 437 bits
Score difference with first non-orthologous sequence - E.histolytica:437 P.ramorum:437

C4LWT4              	100.00%		H3GR02              	100.00%
Bootstrap support for C4LWT4 as seed ortholog is 100%.
Bootstrap support for H3GR02 as seed ortholog is 100%.

Group of orthologs #137. Best score 436 bits
Score difference with first non-orthologous sequence - E.histolytica:436 P.ramorum:436

Q5V9E8              	100.00%		H3G8D0              	100.00%
Bootstrap support for Q5V9E8 as seed ortholog is 100%.
Bootstrap support for H3G8D0 as seed ortholog is 100%.

Group of orthologs #138. Best score 435 bits
Score difference with first non-orthologous sequence - E.histolytica:435 P.ramorum:381

C4LX51              	100.00%		H3G9Z7              	100.00%
C4LWI5              	26.62%		H3G9Z8              	96.10%
Bootstrap support for C4LX51 as seed ortholog is 100%.
Bootstrap support for H3G9Z7 as seed ortholog is 100%.

Group of orthologs #139. Best score 434 bits
Score difference with first non-orthologous sequence - E.histolytica:434 P.ramorum:310

C4LZN0              	100.00%		H3G8K3              	100.00%
Bootstrap support for C4LZN0 as seed ortholog is 100%.
Bootstrap support for H3G8K3 as seed ortholog is 100%.

Group of orthologs #140. Best score 431 bits
Score difference with first non-orthologous sequence - E.histolytica:431 P.ramorum:240

C4LV24              	100.00%		H3G8W8              	100.00%
B1N346              	18.11%		
Bootstrap support for C4LV24 as seed ortholog is 100%.
Bootstrap support for H3G8W8 as seed ortholog is 100%.

Group of orthologs #141. Best score 429 bits
Score difference with first non-orthologous sequence - E.histolytica:429 P.ramorum:225

Q5U8M9              	100.00%		H3G8C8              	100.00%
                    	       		H3GAP9              	61.16%
                    	       		H3G8M9              	12.95%
Bootstrap support for Q5U8M9 as seed ortholog is 100%.
Bootstrap support for H3G8C8 as seed ortholog is 100%.

Group of orthologs #142. Best score 423 bits
Score difference with first non-orthologous sequence - E.histolytica:423 P.ramorum:423

C4M169              	100.00%		H3GUI9              	100.00%
C4M2Z1              	19.94%		
Bootstrap support for C4M169 as seed ortholog is 100%.
Bootstrap support for H3GUI9 as seed ortholog is 100%.

Group of orthologs #143. Best score 422 bits
Score difference with first non-orthologous sequence - E.histolytica:422 P.ramorum:422

C4M3N2              	100.00%		H3G986              	100.00%
B1N510              	53.40%		
Bootstrap support for C4M3N2 as seed ortholog is 100%.
Bootstrap support for H3G986 as seed ortholog is 100%.

Group of orthologs #144. Best score 421 bits
Score difference with first non-orthologous sequence - E.histolytica:421 P.ramorum:421

C4M6R5              	100.00%		H3GC19              	100.00%
Bootstrap support for C4M6R5 as seed ortholog is 100%.
Bootstrap support for H3GC19 as seed ortholog is 100%.

Group of orthologs #145. Best score 421 bits
Score difference with first non-orthologous sequence - E.histolytica:421 P.ramorum:187

C4M7Y5              	100.00%		H3HAQ3              	100.00%
Bootstrap support for C4M7Y5 as seed ortholog is 100%.
Bootstrap support for H3HAQ3 as seed ortholog is 99%.

Group of orthologs #146. Best score 419 bits
Score difference with first non-orthologous sequence - E.histolytica:419 P.ramorum:94

C4M8V1              	100.00%		H3H2X5              	100.00%
Bootstrap support for C4M8V1 as seed ortholog is 100%.
Bootstrap support for H3H2X5 as seed ortholog is 88%.

Group of orthologs #147. Best score 413 bits
Score difference with first non-orthologous sequence - E.histolytica:256 P.ramorum:151

C4LVM6              	100.00%		H3G4Y9              	100.00%
Bootstrap support for C4LVM6 as seed ortholog is 100%.
Bootstrap support for H3G4Y9 as seed ortholog is 99%.

Group of orthologs #148. Best score 413 bits
Score difference with first non-orthologous sequence - E.histolytica:413 P.ramorum:413

C4M071              	100.00%		H3G9L9              	100.00%
Bootstrap support for C4M071 as seed ortholog is 100%.
Bootstrap support for H3G9L9 as seed ortholog is 100%.

Group of orthologs #149. Best score 412 bits
Score difference with first non-orthologous sequence - E.histolytica:412 P.ramorum:38

C4M8X7              	100.00%		H3H542              	100.00%
                    	       		H3H433              	40.87%
                    	       		H3GZW0              	26.82%
                    	       		H3HA38              	5.54%
Bootstrap support for C4M8X7 as seed ortholog is 100%.
Bootstrap support for H3H542 as seed ortholog is 71%.
Alternative seed ortholog is H3GZV5 (38 bits away from this cluster)

Group of orthologs #150. Best score 412 bits
Score difference with first non-orthologous sequence - E.histolytica:191 P.ramorum:89

C4LWF2              	100.00%		H3G9I9              	100.00%
Bootstrap support for C4LWF2 as seed ortholog is 100%.
Bootstrap support for H3G9I9 as seed ortholog is 99%.

Group of orthologs #151. Best score 411 bits
Score difference with first non-orthologous sequence - E.histolytica:240 P.ramorum:135

Q6SCK6              	100.00%		H3G9R4              	100.00%
Bootstrap support for Q6SCK6 as seed ortholog is 100%.
Bootstrap support for H3G9R4 as seed ortholog is 99%.

Group of orthologs #152. Best score 410 bits
Score difference with first non-orthologous sequence - E.histolytica:323 P.ramorum:171

B1N459              	100.00%		H3G566              	100.00%
Bootstrap support for B1N459 as seed ortholog is 100%.
Bootstrap support for H3G566 as seed ortholog is 99%.

Group of orthologs #153. Best score 409 bits
Score difference with first non-orthologous sequence - E.histolytica:409 P.ramorum:313

C4M0K5              	100.00%		H3G886              	100.00%
Bootstrap support for C4M0K5 as seed ortholog is 100%.
Bootstrap support for H3G886 as seed ortholog is 100%.

Group of orthologs #154. Best score 407 bits
Score difference with first non-orthologous sequence - E.histolytica:65 P.ramorum:407

C4MA19              	100.00%		H3GAU9              	100.00%
Bootstrap support for C4MA19 as seed ortholog is 90%.
Bootstrap support for H3GAU9 as seed ortholog is 100%.

Group of orthologs #155. Best score 406 bits
Score difference with first non-orthologous sequence - E.histolytica:269 P.ramorum:406

C4M297              	100.00%		H3G835              	100.00%
Bootstrap support for C4M297 as seed ortholog is 100%.
Bootstrap support for H3G835 as seed ortholog is 100%.

Group of orthologs #156. Best score 404 bits
Score difference with first non-orthologous sequence - E.histolytica:404 P.ramorum:404

C4LYG3              	100.00%		H3G6X3              	100.00%
                    	       		H3GAH5              	100.00%
Bootstrap support for C4LYG3 as seed ortholog is 100%.
Bootstrap support for H3G6X3 as seed ortholog is 100%.
Bootstrap support for H3GAH5 as seed ortholog is 100%.

Group of orthologs #157. Best score 403 bits
Score difference with first non-orthologous sequence - E.histolytica:403 P.ramorum:168

C4LWM9              	100.00%		H3GSH8              	100.00%
Bootstrap support for C4LWM9 as seed ortholog is 100%.
Bootstrap support for H3GSH8 as seed ortholog is 99%.

Group of orthologs #158. Best score 403 bits
Score difference with first non-orthologous sequence - E.histolytica:128 P.ramorum:190

C4M5I5              	100.00%		H3GTT0              	100.00%
Bootstrap support for C4M5I5 as seed ortholog is 99%.
Bootstrap support for H3GTT0 as seed ortholog is 100%.

Group of orthologs #159. Best score 401 bits
Score difference with first non-orthologous sequence - E.histolytica:204 P.ramorum:144

C4LZM8              	100.00%		H3G780              	100.00%
Bootstrap support for C4LZM8 as seed ortholog is 100%.
Bootstrap support for H3G780 as seed ortholog is 99%.

Group of orthologs #160. Best score 401 bits
Score difference with first non-orthologous sequence - E.histolytica:122 P.ramorum:88

C4M8P6              	100.00%		H3GEM0              	100.00%
Bootstrap support for C4M8P6 as seed ortholog is 92%.
Bootstrap support for H3GEM0 as seed ortholog is 80%.

Group of orthologs #161. Best score 400 bits
Score difference with first non-orthologous sequence - E.histolytica:55 P.ramorum:279

C4M0F3              	100.00%		H3GAE2              	100.00%
Bootstrap support for C4M0F3 as seed ortholog is 95%.
Bootstrap support for H3GAE2 as seed ortholog is 100%.

Group of orthologs #162. Best score 400 bits
Score difference with first non-orthologous sequence - E.histolytica:400 P.ramorum:400

C4M538              	100.00%		H3GA76              	100.00%
Bootstrap support for C4M538 as seed ortholog is 100%.
Bootstrap support for H3GA76 as seed ortholog is 100%.

Group of orthologs #163. Best score 399 bits
Score difference with first non-orthologous sequence - E.histolytica:215 P.ramorum:399

C4M2P7              	100.00%		H3GLA1              	100.00%
C4M2W4              	31.59%		H3GL97              	66.18%
C4M4S6              	29.65%		
C4LXL6              	11.86%		
Bootstrap support for C4M2P7 as seed ortholog is 97%.
Bootstrap support for H3GLA1 as seed ortholog is 100%.

Group of orthologs #164. Best score 398 bits
Score difference with first non-orthologous sequence - E.histolytica:398 P.ramorum:398

C4LTU9              	100.00%		H3GIM1              	100.00%
Bootstrap support for C4LTU9 as seed ortholog is 100%.
Bootstrap support for H3GIM1 as seed ortholog is 100%.

Group of orthologs #165. Best score 396 bits
Score difference with first non-orthologous sequence - E.histolytica:31 P.ramorum:223

C4M6M6              	100.00%		H3G9N8              	100.00%
C4M2N9              	81.48%		
C4LY80              	11.52%		
C4LUV2              	11.52%		
Bootstrap support for C4M6M6 as seed ortholog is 84%.
Bootstrap support for H3G9N8 as seed ortholog is 100%.

Group of orthologs #166. Best score 394 bits
Score difference with first non-orthologous sequence - E.histolytica:255 P.ramorum:78

C4LYP7              	100.00%		H3G5C7              	100.00%
Bootstrap support for C4LYP7 as seed ortholog is 100%.
Bootstrap support for H3G5C7 as seed ortholog is 97%.

Group of orthologs #167. Best score 393 bits
Score difference with first non-orthologous sequence - E.histolytica:299 P.ramorum:277

C4LUP1              	100.00%		H3GZB3              	100.00%
Bootstrap support for C4LUP1 as seed ortholog is 100%.
Bootstrap support for H3GZB3 as seed ortholog is 100%.

Group of orthologs #168. Best score 391 bits
Score difference with first non-orthologous sequence - E.histolytica:48 P.ramorum:228

C4LTI9              	100.00%		H3G8L9              	100.00%
                    	       		H3G904              	35.40%
Bootstrap support for C4LTI9 as seed ortholog is 92%.
Bootstrap support for H3G8L9 as seed ortholog is 100%.

Group of orthologs #169. Best score 390 bits
Score difference with first non-orthologous sequence - E.histolytica:390 P.ramorum:143

C4LYN8              	100.00%		H3GA44              	100.00%
Bootstrap support for C4LYN8 as seed ortholog is 100%.
Bootstrap support for H3GA44 as seed ortholog is 99%.

Group of orthologs #170. Best score 390 bits
Score difference with first non-orthologous sequence - E.histolytica:390 P.ramorum:390

C4M828              	100.00%		H3G852              	100.00%
Bootstrap support for C4M828 as seed ortholog is 100%.
Bootstrap support for H3G852 as seed ortholog is 100%.

Group of orthologs #171. Best score 389 bits
Score difference with first non-orthologous sequence - E.histolytica:389 P.ramorum:389

Q1EQ38              	100.00%		H3GTJ1              	100.00%
Q1EQ39              	8.25%		
Bootstrap support for Q1EQ38 as seed ortholog is 100%.
Bootstrap support for H3GTJ1 as seed ortholog is 100%.

Group of orthologs #172. Best score 388 bits
Score difference with first non-orthologous sequence - E.histolytica:49 P.ramorum:284

C4M4K4              	100.00%		H3GER8              	100.00%
Bootstrap support for C4M4K4 as seed ortholog is 94%.
Bootstrap support for H3GER8 as seed ortholog is 100%.

Group of orthologs #173. Best score 386 bits
Score difference with first non-orthologous sequence - E.histolytica:190 P.ramorum:386

C4M7U9              	100.00%		H3GKE7              	100.00%
C4LU94              	99.00%		H3HAI9              	100.00%
Bootstrap support for C4M7U9 as seed ortholog is 99%.
Bootstrap support for H3GKE7 as seed ortholog is 100%.
Bootstrap support for H3HAI9 as seed ortholog is 100%.

Group of orthologs #174. Best score 386 bits
Score difference with first non-orthologous sequence - E.histolytica:138 P.ramorum:168

C4LSK1              	100.00%		H3G9Z6              	100.00%
C4M9V7              	54.32%		
Bootstrap support for C4LSK1 as seed ortholog is 99%.
Bootstrap support for H3G9Z6 as seed ortholog is 100%.

Group of orthologs #175. Best score 386 bits
Score difference with first non-orthologous sequence - E.histolytica:386 P.ramorum:386

C4M392              	100.00%		H3HCN8              	100.00%
Bootstrap support for C4M392 as seed ortholog is 100%.
Bootstrap support for H3HCN8 as seed ortholog is 100%.

Group of orthologs #176. Best score 382 bits
Score difference with first non-orthologous sequence - E.histolytica:382 P.ramorum:382

C4M8Q4              	100.00%		H3G8C6              	100.00%
C4M8K7              	69.46%		
Bootstrap support for C4M8Q4 as seed ortholog is 100%.
Bootstrap support for H3G8C6 as seed ortholog is 100%.

Group of orthologs #177. Best score 382 bits
Score difference with first non-orthologous sequence - E.histolytica:382 P.ramorum:298

C4LXZ6              	100.00%		H3G6K0              	100.00%
Bootstrap support for C4LXZ6 as seed ortholog is 100%.
Bootstrap support for H3G6K0 as seed ortholog is 100%.

Group of orthologs #178. Best score 380 bits
Score difference with first non-orthologous sequence - E.histolytica:9 P.ramorum:217

C4M907              	100.00%		H3HDB5              	100.00%
Bootstrap support for C4M907 as seed ortholog is 61%.
Alternative seed ortholog is C4LYS6 (9 bits away from this cluster)
Bootstrap support for H3HDB5 as seed ortholog is 100%.

Group of orthologs #179. Best score 379 bits
Score difference with first non-orthologous sequence - E.histolytica:379 P.ramorum:272

C4M5H3              	100.00%		H3G5C8              	100.00%
Bootstrap support for C4M5H3 as seed ortholog is 100%.
Bootstrap support for H3G5C8 as seed ortholog is 100%.

Group of orthologs #180. Best score 375 bits
Score difference with first non-orthologous sequence - E.histolytica:375 P.ramorum:154

C4M296              	100.00%		H3GAL8              	100.00%
                    	       		H3G6U6              	55.75%
Bootstrap support for C4M296 as seed ortholog is 100%.
Bootstrap support for H3GAL8 as seed ortholog is 99%.

Group of orthologs #181. Best score 375 bits
Score difference with first non-orthologous sequence - E.histolytica:127 P.ramorum:67

C4M5F3              	100.00%		H3GAY8              	100.00%
Bootstrap support for C4M5F3 as seed ortholog is 99%.
Bootstrap support for H3GAY8 as seed ortholog is 96%.

Group of orthologs #182. Best score 374 bits
Score difference with first non-orthologous sequence - E.histolytica:374 P.ramorum:374

C4MAW3              	100.00%		H3G8P9              	100.00%
                    	       		H3G5X2              	16.14%
Bootstrap support for C4MAW3 as seed ortholog is 100%.
Bootstrap support for H3G8P9 as seed ortholog is 100%.

Group of orthologs #183. Best score 369 bits
Score difference with first non-orthologous sequence - E.histolytica:369 P.ramorum:155

B1N355              	100.00%		H3G8V8              	100.00%
Q1EQ16              	97.10%		
Bootstrap support for B1N355 as seed ortholog is 100%.
Bootstrap support for H3G8V8 as seed ortholog is 99%.

Group of orthologs #184. Best score 369 bits
Score difference with first non-orthologous sequence - E.histolytica:369 P.ramorum:369

C4M6H0              	100.00%		H3G9L7              	100.00%
Bootstrap support for C4M6H0 as seed ortholog is 100%.
Bootstrap support for H3G9L7 as seed ortholog is 100%.

Group of orthologs #185. Best score 366 bits
Score difference with first non-orthologous sequence - E.histolytica:118 P.ramorum:86

C4MAR8              	100.00%		H3HD47              	100.00%
Bootstrap support for C4MAR8 as seed ortholog is 99%.
Bootstrap support for H3HD47 as seed ortholog is 93%.

Group of orthologs #186. Best score 365 bits
Score difference with first non-orthologous sequence - E.histolytica:125 P.ramorum:135

C4M8K8              	100.00%		H3GY14              	100.00%
Bootstrap support for C4M8K8 as seed ortholog is 86%.
Bootstrap support for H3GY14 as seed ortholog is 99%.

Group of orthologs #187. Best score 364 bits
Score difference with first non-orthologous sequence - E.histolytica:203 P.ramorum:205

C4M4T8              	100.00%		H3G5M3              	100.00%
Bootstrap support for C4M4T8 as seed ortholog is 99%.
Bootstrap support for H3G5M3 as seed ortholog is 99%.

Group of orthologs #188. Best score 363 bits
Score difference with first non-orthologous sequence - E.histolytica:363 P.ramorum:140

C4LSZ7              	100.00%		H3G8X2              	100.00%
Bootstrap support for C4LSZ7 as seed ortholog is 100%.
Bootstrap support for H3G8X2 as seed ortholog is 99%.

Group of orthologs #189. Best score 363 bits
Score difference with first non-orthologous sequence - E.histolytica:307 P.ramorum:363

C4M1X8              	100.00%		H3GA10              	100.00%
Bootstrap support for C4M1X8 as seed ortholog is 100%.
Bootstrap support for H3GA10 as seed ortholog is 100%.

Group of orthologs #190. Best score 361 bits
Score difference with first non-orthologous sequence - E.histolytica:361 P.ramorum:36

C4M9V6              	100.00%		H3G503              	100.00%
Bootstrap support for C4M9V6 as seed ortholog is 100%.
Bootstrap support for H3G503 as seed ortholog is 89%.

Group of orthologs #191. Best score 357 bits
Score difference with first non-orthologous sequence - E.histolytica:357 P.ramorum:357

C4M2T6              	100.00%		H3GCA3              	100.00%
Bootstrap support for C4M2T6 as seed ortholog is 100%.
Bootstrap support for H3GCA3 as seed ortholog is 100%.

Group of orthologs #192. Best score 355 bits
Score difference with first non-orthologous sequence - E.histolytica:273 P.ramorum:239

C4LZ87              	100.00%		H3G9J9              	100.00%
Bootstrap support for C4LZ87 as seed ortholog is 100%.
Bootstrap support for H3G9J9 as seed ortholog is 100%.

Group of orthologs #193. Best score 353 bits
Score difference with first non-orthologous sequence - E.histolytica:353 P.ramorum:353

C4LYN2              	100.00%		H3G947              	100.00%
Bootstrap support for C4LYN2 as seed ortholog is 100%.
Bootstrap support for H3G947 as seed ortholog is 100%.

Group of orthologs #194. Best score 352 bits
Score difference with first non-orthologous sequence - E.histolytica:352 P.ramorum:352

C4M1W8              	100.00%		H3G9L0              	100.00%
Bootstrap support for C4M1W8 as seed ortholog is 100%.
Bootstrap support for H3G9L0 as seed ortholog is 100%.

Group of orthologs #195. Best score 352 bits
Score difference with first non-orthologous sequence - E.histolytica:352 P.ramorum:352

C4M220              	100.00%		H3G9K7              	100.00%
Bootstrap support for C4M220 as seed ortholog is 100%.
Bootstrap support for H3G9K7 as seed ortholog is 100%.

Group of orthologs #196. Best score 349 bits
Score difference with first non-orthologous sequence - E.histolytica:349 P.ramorum:349

C4LWG8              	100.00%		H3H3A8              	100.00%
Bootstrap support for C4LWG8 as seed ortholog is 100%.
Bootstrap support for H3H3A8 as seed ortholog is 100%.

Group of orthologs #197. Best score 348 bits
Score difference with first non-orthologous sequence - E.histolytica:65 P.ramorum:234

C4M7S1              	100.00%		H3GRK8              	100.00%
C4LSF2              	100.00%		H3G6L5              	100.00%
C4M8C0              	52.55%		H3GRK5              	62.23%
C4M5E7              	32.20%		H3G8A1              	59.26%
C4M4W9              	10.61%		H3GRN4              	46.81%
                    	       		H3GRL0              	21.50%
                    	       		H3G8Z4              	7.60%
Bootstrap support for C4M7S1 as seed ortholog is 90%.
Bootstrap support for C4LSF2 as seed ortholog is 79%.
Bootstrap support for H3GRK8 as seed ortholog is 100%.
Bootstrap support for H3G6L5 as seed ortholog is 99%.

Group of orthologs #198. Best score 347 bits
Score difference with first non-orthologous sequence - E.histolytica:149 P.ramorum:62

C4LTM2              	100.00%		H3GNX8              	100.00%
Bootstrap support for C4LTM2 as seed ortholog is 99%.
Bootstrap support for H3GNX8 as seed ortholog is 92%.

Group of orthologs #199. Best score 347 bits
Score difference with first non-orthologous sequence - E.histolytica:175 P.ramorum:174

C4M1Z3              	100.00%		H3GMA5              	100.00%
Bootstrap support for C4M1Z3 as seed ortholog is 100%.
Bootstrap support for H3GMA5 as seed ortholog is 99%.

Group of orthologs #200. Best score 346 bits
Score difference with first non-orthologous sequence - E.histolytica:346 P.ramorum:93

C4M6Y6              	100.00%		H3G607              	100.00%
                    	       		H3G609              	32.21%
Bootstrap support for C4M6Y6 as seed ortholog is 100%.
Bootstrap support for H3G607 as seed ortholog is 97%.

Group of orthologs #201. Best score 346 bits
Score difference with first non-orthologous sequence - E.histolytica:346 P.ramorum:346

Q1EQ35              	100.00%		H3G9Z1              	100.00%
Q1EQ36              	100.00%		
Bootstrap support for Q1EQ35 as seed ortholog is 100%.
Bootstrap support for Q1EQ36 as seed ortholog is 100%.
Bootstrap support for H3G9Z1 as seed ortholog is 100%.

Group of orthologs #202. Best score 344 bits
Score difference with first non-orthologous sequence - E.histolytica:344 P.ramorum:344

C4LYI7              	100.00%		H3GKT1              	100.00%
Bootstrap support for C4LYI7 as seed ortholog is 100%.
Bootstrap support for H3GKT1 as seed ortholog is 100%.

Group of orthologs #203. Best score 342 bits
Score difference with first non-orthologous sequence - E.histolytica:230 P.ramorum:193

C4LXY1              	100.00%		H3G4X2              	100.00%
C4LZ76              	12.53%		
Bootstrap support for C4LXY1 as seed ortholog is 100%.
Bootstrap support for H3G4X2 as seed ortholog is 100%.

Group of orthologs #204. Best score 341 bits
Score difference with first non-orthologous sequence - E.histolytica:341 P.ramorum:341

C4M9H3              	100.00%		H3GPE0              	100.00%
Bootstrap support for C4M9H3 as seed ortholog is 100%.
Bootstrap support for H3GPE0 as seed ortholog is 100%.

Group of orthologs #205. Best score 340 bits
Score difference with first non-orthologous sequence - E.histolytica:87 P.ramorum:340

C4M8I7              	100.00%		H3GA00              	100.00%
Bootstrap support for C4M8I7 as seed ortholog is 98%.
Bootstrap support for H3GA00 as seed ortholog is 100%.

Group of orthologs #206. Best score 337 bits
Score difference with first non-orthologous sequence - E.histolytica:174 P.ramorum:25

C4M986              	100.00%		H3GAA2              	100.00%
Bootstrap support for C4M986 as seed ortholog is 99%.
Bootstrap support for H3GAA2 as seed ortholog is 60%.
Alternative seed ortholog is H3GRN1 (25 bits away from this cluster)

Group of orthologs #207. Best score 337 bits
Score difference with first non-orthologous sequence - E.histolytica:129 P.ramorum:142

Q1EQ22              	100.00%		H3GFB0              	100.00%
Bootstrap support for Q1EQ22 as seed ortholog is 98%.
Bootstrap support for H3GFB0 as seed ortholog is 99%.

Group of orthologs #208. Best score 336 bits
Score difference with first non-orthologous sequence - E.histolytica:45 P.ramorum:156

C4MB24              	100.00%		H3GAS5              	100.00%
                    	       		H3GA30              	28.78%
Bootstrap support for C4MB24 as seed ortholog is 91%.
Bootstrap support for H3GAS5 as seed ortholog is 100%.

Group of orthologs #209. Best score 335 bits
Score difference with first non-orthologous sequence - E.histolytica:151 P.ramorum:335

C4LTC0              	100.00%		H3G943              	100.00%
C4LXG6              	9.89%		
Bootstrap support for C4LTC0 as seed ortholog is 99%.
Bootstrap support for H3G943 as seed ortholog is 100%.

Group of orthologs #210. Best score 335 bits
Score difference with first non-orthologous sequence - E.histolytica:335 P.ramorum:268

C4LZ00              	100.00%		H3GIL8              	100.00%
B1N2S4              	97.18%		
Bootstrap support for C4LZ00 as seed ortholog is 100%.
Bootstrap support for H3GIL8 as seed ortholog is 100%.

Group of orthologs #211. Best score 335 bits
Score difference with first non-orthologous sequence - E.histolytica:12 P.ramorum:219

C4LTQ1              	100.00%		H3HDS0              	100.00%
C4LSN4              	23.16%		
Bootstrap support for C4LTQ1 as seed ortholog is 66%.
Alternative seed ortholog is C4M4D9 (12 bits away from this cluster)
Bootstrap support for H3HDS0 as seed ortholog is 100%.

Group of orthologs #212. Best score 335 bits
Score difference with first non-orthologous sequence - E.histolytica:263 P.ramorum:335

C4LXD5              	100.00%		H3GHW1              	100.00%
Bootstrap support for C4LXD5 as seed ortholog is 100%.
Bootstrap support for H3GHW1 as seed ortholog is 100%.

Group of orthologs #213. Best score 333 bits
Score difference with first non-orthologous sequence - E.histolytica:157 P.ramorum:142

C4MBB2              	100.00%		H3H7S1              	100.00%
B1N2K6              	37.70%		H3H546              	37.52%
Bootstrap support for C4MBB2 as seed ortholog is 99%.
Bootstrap support for H3H7S1 as seed ortholog is 99%.

Group of orthologs #214. Best score 332 bits
Score difference with first non-orthologous sequence - E.histolytica:332 P.ramorum:83

C4MA71              	100.00%		H3GRZ9              	100.00%
                    	       		H3GFR4              	86.71%
Bootstrap support for C4MA71 as seed ortholog is 100%.
Bootstrap support for H3GRZ9 as seed ortholog is 90%.

Group of orthologs #215. Best score 332 bits
Score difference with first non-orthologous sequence - E.histolytica:332 P.ramorum:332

C4LSJ4              	100.00%		H3GEL6              	100.00%
Bootstrap support for C4LSJ4 as seed ortholog is 100%.
Bootstrap support for H3GEL6 as seed ortholog is 100%.

Group of orthologs #216. Best score 331 bits
Score difference with first non-orthologous sequence - E.histolytica:331 P.ramorum:331

C4LWZ3              	100.00%		H3G973              	100.00%
Bootstrap support for C4LWZ3 as seed ortholog is 100%.
Bootstrap support for H3G973 as seed ortholog is 100%.

Group of orthologs #217. Best score 331 bits
Score difference with first non-orthologous sequence - E.histolytica:331 P.ramorum:331

C4M515              	100.00%		H3H563              	100.00%
Bootstrap support for C4M515 as seed ortholog is 100%.
Bootstrap support for H3H563 as seed ortholog is 100%.

Group of orthologs #218. Best score 328 bits
Score difference with first non-orthologous sequence - E.histolytica:328 P.ramorum:189

C4M0S1              	100.00%		H3G9X8              	100.00%
                    	       		H3GVB8              	72.27%
Bootstrap support for C4M0S1 as seed ortholog is 100%.
Bootstrap support for H3G9X8 as seed ortholog is 100%.

Group of orthologs #219. Best score 328 bits
Score difference with first non-orthologous sequence - E.histolytica:157 P.ramorum:159

C4LVM5              	100.00%		H3HAP2              	100.00%
C4LXD0              	7.51%		
Bootstrap support for C4LVM5 as seed ortholog is 99%.
Bootstrap support for H3HAP2 as seed ortholog is 99%.

Group of orthologs #220. Best score 327 bits
Score difference with first non-orthologous sequence - E.histolytica:327 P.ramorum:261

C4LU10              	100.00%		H3GA15              	100.00%
Bootstrap support for C4LU10 as seed ortholog is 100%.
Bootstrap support for H3GA15 as seed ortholog is 100%.

Group of orthologs #221. Best score 326 bits
Score difference with first non-orthologous sequence - E.histolytica:326 P.ramorum:326

C4LXX5              	100.00%		H3G6Y2              	100.00%
C4LZU1              	98.65%		
B1N384              	98.27%		
C4LZA2              	98.27%		
Bootstrap support for C4LXX5 as seed ortholog is 100%.
Bootstrap support for H3G6Y2 as seed ortholog is 100%.

Group of orthologs #222. Best score 326 bits
Score difference with first non-orthologous sequence - E.histolytica:326 P.ramorum:326

C4M0D6              	100.00%		H3GPE9              	100.00%
Bootstrap support for C4M0D6 as seed ortholog is 100%.
Bootstrap support for H3GPE9 as seed ortholog is 100%.

Group of orthologs #223. Best score 325 bits
Score difference with first non-orthologous sequence - E.histolytica:112 P.ramorum:68

Q26334              	100.00%		H3G9W4              	100.00%
Q8WQH7              	8.20%		H3HDS7              	13.27%
Bootstrap support for Q26334 as seed ortholog is 99%.
Bootstrap support for H3G9W4 as seed ortholog is 96%.

Group of orthologs #224. Best score 324 bits
Score difference with first non-orthologous sequence - E.histolytica:166 P.ramorum:146

C4LSG3              	100.00%		H3G5E4              	100.00%
                    	       		H3G6J2              	98.79%
Bootstrap support for C4LSG3 as seed ortholog is 99%.
Bootstrap support for H3G5E4 as seed ortholog is 99%.

Group of orthologs #225. Best score 324 bits
Score difference with first non-orthologous sequence - E.histolytica:324 P.ramorum:324

C4M137              	100.00%		H3GEE0              	100.00%
C4M943              	60.32%		
Bootstrap support for C4M137 as seed ortholog is 100%.
Bootstrap support for H3GEE0 as seed ortholog is 100%.

Group of orthologs #226. Best score 323 bits
Score difference with first non-orthologous sequence - E.histolytica:127 P.ramorum:69

C4LSG9              	100.00%		H3GA03              	100.00%
C4M2K3              	42.86%		
B1N5Y5              	26.19%		
Bootstrap support for C4LSG9 as seed ortholog is 99%.
Bootstrap support for H3GA03 as seed ortholog is 91%.

Group of orthologs #227. Best score 323 bits
Score difference with first non-orthologous sequence - E.histolytica:132 P.ramorum:156

C4M9J9              	100.00%		H3GTV2              	100.00%
B1N4L6              	100.00%		
Bootstrap support for C4M9J9 as seed ortholog is 99%.
Bootstrap support for B1N4L6 as seed ortholog is 99%.
Bootstrap support for H3GTV2 as seed ortholog is 99%.

Group of orthologs #228. Best score 323 bits
Score difference with first non-orthologous sequence - E.histolytica:126 P.ramorum:71

C4M058              	100.00%		H3GWG5              	100.00%
Bootstrap support for C4M058 as seed ortholog is 99%.
Bootstrap support for H3GWG5 as seed ortholog is 92%.

Group of orthologs #229. Best score 323 bits
Score difference with first non-orthologous sequence - E.histolytica:280 P.ramorum:323

C4M856              	100.00%		H3HCZ8              	100.00%
Bootstrap support for C4M856 as seed ortholog is 100%.
Bootstrap support for H3HCZ8 as seed ortholog is 100%.

Group of orthologs #230. Best score 322 bits
Score difference with first non-orthologous sequence - E.histolytica:8 P.ramorum:62

C4M4X8              	100.00%		H3GQI3              	100.00%
C4M4V5              	6.20%		
Bootstrap support for C4M4X8 as seed ortholog is 56%.
Alternative seed ortholog is C4LUM1 (8 bits away from this cluster)
Bootstrap support for H3GQI3 as seed ortholog is 93%.

Group of orthologs #231. Best score 322 bits
Score difference with first non-orthologous sequence - E.histolytica:322 P.ramorum:322

C4LZH9              	100.00%		H3GVT4              	100.00%
Bootstrap support for C4LZH9 as seed ortholog is 100%.
Bootstrap support for H3GVT4 as seed ortholog is 100%.

Group of orthologs #232. Best score 321 bits
Score difference with first non-orthologous sequence - E.histolytica:321 P.ramorum:321

C4LW22              	100.00%		H3GLA6              	100.00%
Bootstrap support for C4LW22 as seed ortholog is 100%.
Bootstrap support for H3GLA6 as seed ortholog is 100%.

Group of orthologs #233. Best score 320 bits
Score difference with first non-orthologous sequence - E.histolytica:320 P.ramorum:320

C4LWW4              	100.00%		H3G8V7              	100.00%
                    	       		H3G5G8              	61.20%
Bootstrap support for C4LWW4 as seed ortholog is 100%.
Bootstrap support for H3G8V7 as seed ortholog is 100%.

Group of orthologs #234. Best score 320 bits
Score difference with first non-orthologous sequence - E.histolytica:320 P.ramorum:95

C4M8D6              	100.00%		H3G9J0              	100.00%
C4M1I8              	40.46%		
Bootstrap support for C4M8D6 as seed ortholog is 100%.
Bootstrap support for H3G9J0 as seed ortholog is 97%.

Group of orthologs #235. Best score 320 bits
Score difference with first non-orthologous sequence - E.histolytica:320 P.ramorum:266

C4M3A2              	100.00%		H3G9F8              	100.00%
Bootstrap support for C4M3A2 as seed ortholog is 100%.
Bootstrap support for H3G9F8 as seed ortholog is 100%.

Group of orthologs #236. Best score 319 bits
Score difference with first non-orthologous sequence - E.histolytica:32 P.ramorum:319

C4M2N7              	100.00%		H3G4Y5              	100.00%
Bootstrap support for C4M2N7 as seed ortholog is 81%.
Bootstrap support for H3G4Y5 as seed ortholog is 100%.

Group of orthologs #237. Best score 319 bits
Score difference with first non-orthologous sequence - E.histolytica:319 P.ramorum:319

C4M8E8              	100.00%		H3G894              	100.00%
Bootstrap support for C4M8E8 as seed ortholog is 100%.
Bootstrap support for H3G894 as seed ortholog is 100%.

Group of orthologs #238. Best score 319 bits
Score difference with first non-orthologous sequence - E.histolytica:319 P.ramorum:319

C4LTX9              	100.00%		H3H2A5              	100.00%
Bootstrap support for C4LTX9 as seed ortholog is 100%.
Bootstrap support for H3H2A5 as seed ortholog is 100%.

Group of orthologs #239. Best score 317 bits
Score difference with first non-orthologous sequence - E.histolytica:268 P.ramorum:317

C4M401              	100.00%		H3G8E6              	100.00%
Bootstrap support for C4M401 as seed ortholog is 99%.
Bootstrap support for H3G8E6 as seed ortholog is 100%.

Group of orthologs #240. Best score 316 bits
Score difference with first non-orthologous sequence - E.histolytica:228 P.ramorum:218

C4LXF5              	100.00%		H3G5D1              	100.00%
Bootstrap support for C4LXF5 as seed ortholog is 100%.
Bootstrap support for H3G5D1 as seed ortholog is 100%.

Group of orthologs #241. Best score 316 bits
Score difference with first non-orthologous sequence - E.histolytica:316 P.ramorum:316

C4M6G8              	100.00%		H3GAS1              	100.00%
Bootstrap support for C4M6G8 as seed ortholog is 100%.
Bootstrap support for H3GAS1 as seed ortholog is 100%.

Group of orthologs #242. Best score 315 bits
Score difference with first non-orthologous sequence - E.histolytica:315 P.ramorum:263

C4M7J5              	100.00%		H3HED0              	100.00%
Bootstrap support for C4M7J5 as seed ortholog is 100%.
Bootstrap support for H3HED0 as seed ortholog is 100%.

Group of orthologs #243. Best score 314 bits
Score difference with first non-orthologous sequence - E.histolytica:314 P.ramorum:151

C4LXN0              	100.00%		H3G9Y7              	100.00%
Bootstrap support for C4LXN0 as seed ortholog is 100%.
Bootstrap support for H3G9Y7 as seed ortholog is 99%.

Group of orthologs #244. Best score 313 bits
Score difference with first non-orthologous sequence - E.histolytica:206 P.ramorum:313

C4LXY4              	100.00%		H3G5Z6              	100.00%
Bootstrap support for C4LXY4 as seed ortholog is 100%.
Bootstrap support for H3G5Z6 as seed ortholog is 100%.

Group of orthologs #245. Best score 312 bits
Score difference with first non-orthologous sequence - E.histolytica:258 P.ramorum:243

B1N423              	100.00%		H3G8Z2              	100.00%
C4MAV3              	100.00%		H3G5L4              	82.57%
C4MBB9              	98.60%		
Bootstrap support for B1N423 as seed ortholog is 100%.
Bootstrap support for C4MAV3 as seed ortholog is 100%.
Bootstrap support for H3G8Z2 as seed ortholog is 100%.

Group of orthologs #246. Best score 312 bits
Score difference with first non-orthologous sequence - E.histolytica:312 P.ramorum:94

C4M9I9              	100.00%		H3HBJ6              	100.00%
                    	       		H3H7R1              	65.81%
Bootstrap support for C4M9I9 as seed ortholog is 100%.
Bootstrap support for H3HBJ6 as seed ortholog is 99%.

Group of orthologs #247. Best score 312 bits
Score difference with first non-orthologous sequence - E.histolytica:312 P.ramorum:240

C4M8C7              	100.00%		H3GBK8              	100.00%
Bootstrap support for C4M8C7 as seed ortholog is 100%.
Bootstrap support for H3GBK8 as seed ortholog is 100%.

Group of orthologs #248. Best score 310 bits
Score difference with first non-orthologous sequence - E.histolytica:310 P.ramorum:310

C4LX52              	100.00%		H3GA60              	100.00%
                    	       		H3GXA3              	45.89%
Bootstrap support for C4LX52 as seed ortholog is 100%.
Bootstrap support for H3GA60 as seed ortholog is 100%.

Group of orthologs #249. Best score 310 bits
Score difference with first non-orthologous sequence - E.histolytica:310 P.ramorum:310

C4LTW9              	100.00%		H3GWS1              	100.00%
Bootstrap support for C4LTW9 as seed ortholog is 100%.
Bootstrap support for H3GWS1 as seed ortholog is 100%.

Group of orthologs #250. Best score 309 bits
Score difference with first non-orthologous sequence - E.histolytica:309 P.ramorum:309

C4M0F4              	100.00%		H3GAR2              	100.00%
C4M323              	67.48%		
C4LXB1              	46.63%		
Bootstrap support for C4M0F4 as seed ortholog is 100%.
Bootstrap support for H3GAR2 as seed ortholog is 100%.

Group of orthologs #251. Best score 309 bits
Score difference with first non-orthologous sequence - E.histolytica:54 P.ramorum:244

C4LZX1              	100.00%		H3G8M7              	100.00%
Bootstrap support for C4LZX1 as seed ortholog is 87%.
Bootstrap support for H3G8M7 as seed ortholog is 100%.

Group of orthologs #252. Best score 308 bits
Score difference with first non-orthologous sequence - E.histolytica:221 P.ramorum:199

C4LSE4              	100.00%		H3HBV5              	100.00%
B1N3D9              	18.75%		
Bootstrap support for C4LSE4 as seed ortholog is 100%.
Bootstrap support for H3HBV5 as seed ortholog is 100%.

Group of orthologs #253. Best score 306 bits
Score difference with first non-orthologous sequence - E.histolytica:81 P.ramorum:40

B1N2G7              	100.00%		H3H377              	100.00%
Q761W9              	25.30%		
C4M3C2              	7.64%		
Bootstrap support for B1N2G7 as seed ortholog is 98%.
Bootstrap support for H3H377 as seed ortholog is 84%.

Group of orthologs #254. Best score 304 bits
Score difference with first non-orthologous sequence - E.histolytica:304 P.ramorum:304

C4M2Q1              	100.00%		H3G8Q6              	100.00%
Bootstrap support for C4M2Q1 as seed ortholog is 100%.
Bootstrap support for H3G8Q6 as seed ortholog is 100%.

Group of orthologs #255. Best score 303 bits
Score difference with first non-orthologous sequence - E.histolytica:303 P.ramorum:303

C4M0Q1              	100.00%		H3G5V8              	100.00%
Bootstrap support for C4M0Q1 as seed ortholog is 100%.
Bootstrap support for H3G5V8 as seed ortholog is 100%.

Group of orthologs #256. Best score 302 bits
Score difference with first non-orthologous sequence - E.histolytica:302 P.ramorum:302

C4M0L4              	100.00%		H3GTN8              	100.00%
                    	       		H3GS01              	45.46%
Bootstrap support for C4M0L4 as seed ortholog is 100%.
Bootstrap support for H3GTN8 as seed ortholog is 100%.

Group of orthologs #257. Best score 302 bits
Score difference with first non-orthologous sequence - E.histolytica:302 P.ramorum:302

B1N3T5              	100.00%		H3H4C8              	100.00%
Q1EPY2              	99.32%		
Bootstrap support for B1N3T5 as seed ortholog is 100%.
Bootstrap support for H3H4C8 as seed ortholog is 100%.

Group of orthologs #258. Best score 302 bits
Score difference with first non-orthologous sequence - E.histolytica:302 P.ramorum:302

C4LZ95              	100.00%		H3G756              	100.00%
Bootstrap support for C4LZ95 as seed ortholog is 100%.
Bootstrap support for H3G756 as seed ortholog is 100%.

Group of orthologs #259. Best score 302 bits
Score difference with first non-orthologous sequence - E.histolytica:302 P.ramorum:302

C4M3V4              	100.00%		H3G5N2              	100.00%
Bootstrap support for C4M3V4 as seed ortholog is 100%.
Bootstrap support for H3G5N2 as seed ortholog is 100%.

Group of orthologs #260. Best score 301 bits
Score difference with first non-orthologous sequence - E.histolytica:301 P.ramorum:301

C4LZ57              	100.00%		H3H3X5              	100.00%
                    	       		H3GC76              	11.27%
Bootstrap support for C4LZ57 as seed ortholog is 100%.
Bootstrap support for H3H3X5 as seed ortholog is 100%.

Group of orthologs #261. Best score 300 bits
Score difference with first non-orthologous sequence - E.histolytica:300 P.ramorum:300

C4M3Y9              	100.00%		H3G7F3              	100.00%
Bootstrap support for C4M3Y9 as seed ortholog is 100%.
Bootstrap support for H3G7F3 as seed ortholog is 100%.

Group of orthologs #262. Best score 298 bits
Score difference with first non-orthologous sequence - E.histolytica:298 P.ramorum:99

C4M0H9              	100.00%		H3G8J7              	100.00%
O15635              	100.00%		H3G8J8              	73.45%
Q401L7              	73.39%		
Bootstrap support for C4M0H9 as seed ortholog is 100%.
Bootstrap support for O15635 as seed ortholog is 100%.
Bootstrap support for H3G8J7 as seed ortholog is 99%.

Group of orthologs #263. Best score 298 bits
Score difference with first non-orthologous sequence - E.histolytica:197 P.ramorum:191

C4LSY9              	100.00%		H3G7J3              	100.00%
Bootstrap support for C4LSY9 as seed ortholog is 100%.
Bootstrap support for H3G7J3 as seed ortholog is 100%.

Group of orthologs #264. Best score 298 bits
Score difference with first non-orthologous sequence - E.histolytica:298 P.ramorum:298

C4LXJ5              	100.00%		H3G9H3              	100.00%
Bootstrap support for C4LXJ5 as seed ortholog is 100%.
Bootstrap support for H3G9H3 as seed ortholog is 100%.

Group of orthologs #265. Best score 298 bits
Score difference with first non-orthologous sequence - E.histolytica:298 P.ramorum:298

Q2PHE2              	100.00%		H3HCD9              	100.00%
Bootstrap support for Q2PHE2 as seed ortholog is 100%.
Bootstrap support for H3HCD9 as seed ortholog is 100%.

Group of orthologs #266. Best score 297 bits
Score difference with first non-orthologous sequence - E.histolytica:297 P.ramorum:297

C4M482              	100.00%		H3G6D2              	100.00%
Bootstrap support for C4M482 as seed ortholog is 100%.
Bootstrap support for H3G6D2 as seed ortholog is 100%.

Group of orthologs #267. Best score 296 bits
Score difference with first non-orthologous sequence - E.histolytica:296 P.ramorum:296

C4M7U0              	100.00%		H3G949              	100.00%
Bootstrap support for C4M7U0 as seed ortholog is 100%.
Bootstrap support for H3G949 as seed ortholog is 100%.

Group of orthologs #268. Best score 295 bits
Score difference with first non-orthologous sequence - E.histolytica:207 P.ramorum:62

B1N522              	100.00%		H3GAG2              	100.00%
Bootstrap support for B1N522 as seed ortholog is 100%.
Bootstrap support for H3GAG2 as seed ortholog is 98%.

Group of orthologs #269. Best score 292 bits
Score difference with first non-orthologous sequence - E.histolytica:292 P.ramorum:292

C4LWZ7              	100.00%		H3GB03              	100.00%
Bootstrap support for C4LWZ7 as seed ortholog is 100%.
Bootstrap support for H3GB03 as seed ortholog is 100%.

Group of orthologs #270. Best score 292 bits
Score difference with first non-orthologous sequence - E.histolytica:292 P.ramorum:292

C4M882              	100.00%		H3GL90              	100.00%
Bootstrap support for C4M882 as seed ortholog is 100%.
Bootstrap support for H3GL90 as seed ortholog is 100%.

Group of orthologs #271. Best score 292 bits
Score difference with first non-orthologous sequence - E.histolytica:59 P.ramorum:62

C4LV33              	100.00%		H3HBW7              	100.00%
Bootstrap support for C4LV33 as seed ortholog is 93%.
Bootstrap support for H3HBW7 as seed ortholog is 95%.

Group of orthologs #272. Best score 289 bits
Score difference with first non-orthologous sequence - E.histolytica:289 P.ramorum:152

C4M4G8              	100.00%		H3GAB1              	100.00%
                    	       		H3GQ46              	25.74%
Bootstrap support for C4M4G8 as seed ortholog is 100%.
Bootstrap support for H3GAB1 as seed ortholog is 99%.

Group of orthologs #273. Best score 289 bits
Score difference with first non-orthologous sequence - E.histolytica:289 P.ramorum:289

C4M7H0              	100.00%		H3GAH7              	100.00%
Bootstrap support for C4M7H0 as seed ortholog is 100%.
Bootstrap support for H3GAH7 as seed ortholog is 100%.

Group of orthologs #274. Best score 289 bits
Score difference with first non-orthologous sequence - E.histolytica:289 P.ramorum:289

C4M399              	100.00%		H3H4A6              	100.00%
Bootstrap support for C4M399 as seed ortholog is 100%.
Bootstrap support for H3H4A6 as seed ortholog is 100%.

Group of orthologs #275. Best score 288 bits
Score difference with first non-orthologous sequence - E.histolytica:288 P.ramorum:236

B1N5T0              	100.00%		H3G5L8              	100.00%
B1N538              	68.77%		
B1N5U7              	65.30%		
Bootstrap support for B1N5T0 as seed ortholog is 100%.
Bootstrap support for H3G5L8 as seed ortholog is 100%.

Group of orthologs #276. Best score 287 bits
Score difference with first non-orthologous sequence - E.histolytica:287 P.ramorum:164

C4LSI5              	100.00%		H3GGA5              	100.00%
                    	       		H3GX82              	6.30%
Bootstrap support for C4LSI5 as seed ortholog is 100%.
Bootstrap support for H3GGA5 as seed ortholog is 99%.

Group of orthologs #277. Best score 287 bits
Score difference with first non-orthologous sequence - E.histolytica:57 P.ramorum:59

C4LST3              	100.00%		H3G9M8              	100.00%
Bootstrap support for C4LST3 as seed ortholog is 94%.
Bootstrap support for H3G9M8 as seed ortholog is 94%.

Group of orthologs #278. Best score 287 bits
Score difference with first non-orthologous sequence - E.histolytica:128 P.ramorum:3

C4M7Y1              	100.00%		H3G7E4              	100.00%
Bootstrap support for C4M7Y1 as seed ortholog is 99%.
Bootstrap support for H3G7E4 as seed ortholog is 44%.
Alternative seed ortholog is H3G710 (3 bits away from this cluster)

Group of orthologs #279. Best score 287 bits
Score difference with first non-orthologous sequence - E.histolytica:122 P.ramorum:116

C4M4E5              	100.00%		H3GBC9              	100.00%
Bootstrap support for C4M4E5 as seed ortholog is 95%.
Bootstrap support for H3GBC9 as seed ortholog is 99%.

Group of orthologs #280. Best score 286 bits
Score difference with first non-orthologous sequence - E.histolytica:286 P.ramorum:286

C4LU56              	100.00%		H3G8C3              	100.00%
Bootstrap support for C4LU56 as seed ortholog is 100%.
Bootstrap support for H3G8C3 as seed ortholog is 100%.

Group of orthologs #281. Best score 286 bits
Score difference with first non-orthologous sequence - E.histolytica:286 P.ramorum:286

C4M791              	100.00%		H3GYM4              	100.00%
Bootstrap support for C4M791 as seed ortholog is 100%.
Bootstrap support for H3GYM4 as seed ortholog is 100%.

Group of orthologs #282. Best score 284 bits
Score difference with first non-orthologous sequence - E.histolytica:34 P.ramorum:46

C4M6K6              	100.00%		H3G8Q7              	100.00%
                    	       		H3G9A3              	9.49%
Bootstrap support for C4M6K6 as seed ortholog is 85%.
Bootstrap support for H3G8Q7 as seed ortholog is 91%.

Group of orthologs #283. Best score 284 bits
Score difference with first non-orthologous sequence - E.histolytica:284 P.ramorum:284

C4LW07              	100.00%		H3GG49              	100.00%
Bootstrap support for C4LW07 as seed ortholog is 100%.
Bootstrap support for H3GG49 as seed ortholog is 100%.

Group of orthologs #284. Best score 282 bits
Score difference with first non-orthologous sequence - E.histolytica:282 P.ramorum:72

Q769I7              	100.00%		H3G6I7              	100.00%
Bootstrap support for Q769I7 as seed ortholog is 100%.
Bootstrap support for H3G6I7 as seed ortholog is 96%.

Group of orthologs #285. Best score 282 bits
Score difference with first non-orthologous sequence - E.histolytica:282 P.ramorum:109

C4LYM8              	100.00%		H3GV09              	100.00%
Bootstrap support for C4LYM8 as seed ortholog is 100%.
Bootstrap support for H3GV09 as seed ortholog is 99%.

Group of orthologs #286. Best score 281 bits
Score difference with first non-orthologous sequence - E.histolytica:138 P.ramorum:118

C4M5D4              	100.00%		H3G7T0              	100.00%
C4M9B3              	31.44%		
C4LSZ2              	14.81%		
C4M9F2              	9.94%		
Bootstrap support for C4M5D4 as seed ortholog is 99%.
Bootstrap support for H3G7T0 as seed ortholog is 99%.

Group of orthologs #287. Best score 281 bits
Score difference with first non-orthologous sequence - E.histolytica:281 P.ramorum:27

C4LY93              	100.00%		H3GF97              	100.00%
                    	       		H3GF95              	66.92%
                    	       		H3GF55              	40.41%
                    	       		H3GIT9              	29.85%
Bootstrap support for C4LY93 as seed ortholog is 100%.
Bootstrap support for H3GF97 as seed ortholog is 75%.

Group of orthologs #288. Best score 280 bits
Score difference with first non-orthologous sequence - E.histolytica:34 P.ramorum:201

C4M8K6              	100.00%		H3GB56              	100.00%
C4M5Z7              	91.80%		H3GAE8              	87.50%
C4M468              	38.52%		
Bootstrap support for C4M8K6 as seed ortholog is 97%.
Bootstrap support for H3GB56 as seed ortholog is 100%.

Group of orthologs #289. Best score 280 bits
Score difference with first non-orthologous sequence - E.histolytica:280 P.ramorum:47

C4MAS9              	100.00%		H3GAC3              	100.00%
Q86D27              	56.83%		
B1N417              	40.99%		
Bootstrap support for C4MAS9 as seed ortholog is 100%.
Bootstrap support for H3GAC3 as seed ortholog is 87%.

Group of orthologs #290. Best score 280 bits
Score difference with first non-orthologous sequence - E.histolytica:56 P.ramorum:87

C4LXL1              	100.00%		H3G8L2              	100.00%
                    	       		H3G8L3              	100.00%
Bootstrap support for C4LXL1 as seed ortholog is 99%.
Bootstrap support for H3G8L2 as seed ortholog is 99%.
Bootstrap support for H3G8L3 as seed ortholog is 100%.

Group of orthologs #291. Best score 279 bits
Score difference with first non-orthologous sequence - E.histolytica:192 P.ramorum:195

C4LU92              	100.00%		H3G5G7              	100.00%
C4LTS8              	98.38%		
C4M6P6              	83.02%		
Bootstrap support for C4LU92 as seed ortholog is 100%.
Bootstrap support for H3G5G7 as seed ortholog is 100%.

Group of orthologs #292. Best score 279 bits
Score difference with first non-orthologous sequence - E.histolytica:279 P.ramorum:279

C4M3U5              	100.00%		H3GBZ7              	100.00%
C4MA29              	99.51%		
Bootstrap support for C4M3U5 as seed ortholog is 100%.
Bootstrap support for H3GBZ7 as seed ortholog is 100%.

Group of orthologs #293. Best score 279 bits
Score difference with first non-orthologous sequence - E.histolytica:279 P.ramorum:279

C4M854              	100.00%		H3G8G2              	100.00%
Bootstrap support for C4M854 as seed ortholog is 100%.
Bootstrap support for H3G8G2 as seed ortholog is 100%.

Group of orthologs #294. Best score 278 bits
Score difference with first non-orthologous sequence - E.histolytica:278 P.ramorum:212

C4M7V8              	100.00%		H3G9Y2              	100.00%
Bootstrap support for C4M7V8 as seed ortholog is 100%.
Bootstrap support for H3G9Y2 as seed ortholog is 100%.

Group of orthologs #295. Best score 278 bits
Score difference with first non-orthologous sequence - E.histolytica:278 P.ramorum:278

C4M3K5              	100.00%		H3GEH1              	100.00%
Bootstrap support for C4M3K5 as seed ortholog is 100%.
Bootstrap support for H3GEH1 as seed ortholog is 100%.

Group of orthologs #296. Best score 277 bits
Score difference with first non-orthologous sequence - E.histolytica:277 P.ramorum:277

C4LW47              	100.00%		H3GMC4              	100.00%
Bootstrap support for C4LW47 as seed ortholog is 100%.
Bootstrap support for H3GMC4 as seed ortholog is 100%.

Group of orthologs #297. Best score 277 bits
Score difference with first non-orthologous sequence - E.histolytica:277 P.ramorum:143

C4M1X4              	100.00%		H3GGW8              	100.00%
Bootstrap support for C4M1X4 as seed ortholog is 100%.
Bootstrap support for H3GGW8 as seed ortholog is 99%.

Group of orthologs #298. Best score 277 bits
Score difference with first non-orthologous sequence - E.histolytica:139 P.ramorum:215

C4MB38              	100.00%		H3G8J0              	100.00%
Bootstrap support for C4MB38 as seed ortholog is 99%.
Bootstrap support for H3G8J0 as seed ortholog is 100%.

Group of orthologs #299. Best score 275 bits
Score difference with first non-orthologous sequence - E.histolytica:107 P.ramorum:275

C4LYT1              	100.00%		H3HB42              	100.00%
C4LSR0              	20.53%		H3GDX1              	78.60%
C4LYI8              	6.77%		H3HA97              	53.30%
                    	       		H3GIZ7              	29.90%
Bootstrap support for C4LYT1 as seed ortholog is 97%.
Bootstrap support for H3HB42 as seed ortholog is 100%.

Group of orthologs #300. Best score 275 bits
Score difference with first non-orthologous sequence - E.histolytica:275 P.ramorum:275

C4LVS1              	100.00%		H3HDB8              	100.00%
C4M3U3              	100.00%		
C4LVK3              	64.04%		
Bootstrap support for C4LVS1 as seed ortholog is 100%.
Bootstrap support for C4M3U3 as seed ortholog is 100%.
Bootstrap support for H3HDB8 as seed ortholog is 100%.

Group of orthologs #301. Best score 275 bits
Score difference with first non-orthologous sequence - E.histolytica:132 P.ramorum:148

C4M224              	100.00%		H3GFN9              	100.00%
C4M042              	8.82%		
Bootstrap support for C4M224 as seed ortholog is 91%.
Bootstrap support for H3GFN9 as seed ortholog is 99%.

Group of orthologs #302. Best score 275 bits
Score difference with first non-orthologous sequence - E.histolytica:275 P.ramorum:275

C4M7Z3              	100.00%		H3GAD9              	100.00%
C4LY89              	91.56%		
Bootstrap support for C4M7Z3 as seed ortholog is 100%.
Bootstrap support for H3GAD9 as seed ortholog is 100%.

Group of orthologs #303. Best score 275 bits
Score difference with first non-orthologous sequence - E.histolytica:275 P.ramorum:275

C4M6T8              	100.00%		H3GHW5              	100.00%
Bootstrap support for C4M6T8 as seed ortholog is 100%.
Bootstrap support for H3GHW5 as seed ortholog is 100%.

Group of orthologs #304. Best score 274 bits
Score difference with first non-orthologous sequence - E.histolytica:164 P.ramorum:34

C4M474              	100.00%		H3G6F6              	100.00%
C4M916              	43.92%		H3GMG6              	24.63%
C4M5Y9              	39.19%		
Bootstrap support for C4M474 as seed ortholog is 100%.
Bootstrap support for H3G6F6 as seed ortholog is 85%.

Group of orthologs #305. Best score 272 bits
Score difference with first non-orthologous sequence - E.histolytica:272 P.ramorum:272

C4M085              	100.00%		H3G884              	100.00%
B1N3M3              	20.36%		
Bootstrap support for C4M085 as seed ortholog is 100%.
Bootstrap support for H3G884 as seed ortholog is 100%.

Group of orthologs #306. Best score 271 bits
Score difference with first non-orthologous sequence - E.histolytica:120 P.ramorum:46

B1N539              	100.00%		H3GAB6              	100.00%
C4MB42              	100.00%		
C4M6E2              	96.54%		
B1N4I4              	94.52%		
B1N433              	90.78%		
C4LY26              	85.01%		
C4M110              	31.99%		
Bootstrap support for B1N539 as seed ortholog is 99%.
Bootstrap support for C4MB42 as seed ortholog is 99%.
Bootstrap support for H3GAB6 as seed ortholog is 93%.

Group of orthologs #307. Best score 271 bits
Score difference with first non-orthologous sequence - E.histolytica:74 P.ramorum:155

C4M7W7              	100.00%		H3GAM5              	100.00%
Bootstrap support for C4M7W7 as seed ortholog is 93%.
Bootstrap support for H3GAM5 as seed ortholog is 99%.

Group of orthologs #308. Best score 270 bits
Score difference with first non-orthologous sequence - E.histolytica:270 P.ramorum:270

C4LY44              	100.00%		H3G8W6              	100.00%
Bootstrap support for C4LY44 as seed ortholog is 100%.
Bootstrap support for H3G8W6 as seed ortholog is 100%.

Group of orthologs #309. Best score 270 bits
Score difference with first non-orthologous sequence - E.histolytica:40 P.ramorum:39

C4M525              	100.00%		H3GAB0              	100.00%
Bootstrap support for C4M525 as seed ortholog is 97%.
Bootstrap support for H3GAB0 as seed ortholog is 96%.

Group of orthologs #310. Best score 269 bits
Score difference with first non-orthologous sequence - E.histolytica:269 P.ramorum:56

B1N2N4              	100.00%		H3G667              	100.00%
C4LVZ3              	100.00%		
B1N610              	42.60%		
Bootstrap support for B1N2N4 as seed ortholog is 100%.
Bootstrap support for C4LVZ3 as seed ortholog is 100%.
Bootstrap support for H3G667 as seed ortholog is 95%.

Group of orthologs #311. Best score 269 bits
Score difference with first non-orthologous sequence - E.histolytica:269 P.ramorum:269

C4M8N0              	100.00%		H3GM62              	100.00%
Bootstrap support for C4M8N0 as seed ortholog is 100%.
Bootstrap support for H3GM62 as seed ortholog is 100%.

Group of orthologs #312. Best score 267 bits
Score difference with first non-orthologous sequence - E.histolytica:267 P.ramorum:267

C4LUL4              	100.00%		H3G8K1              	100.00%
Bootstrap support for C4LUL4 as seed ortholog is 100%.
Bootstrap support for H3G8K1 as seed ortholog is 100%.

Group of orthologs #313. Best score 265 bits
Score difference with first non-orthologous sequence - E.histolytica:265 P.ramorum:265

B1N2Z3              	100.00%		H3G993              	100.00%
Bootstrap support for B1N2Z3 as seed ortholog is 100%.
Bootstrap support for H3G993 as seed ortholog is 100%.

Group of orthologs #314. Best score 264 bits
Score difference with first non-orthologous sequence - E.histolytica:25 P.ramorum:20

C4LZF9              	100.00%		H3GIW2              	100.00%
B1N3W3              	55.71%		H3GW41              	23.47%
                    	       		H3HB65              	18.24%
                    	       		H3GVV5              	9.12%
                    	       		H3H4V3              	5.23%
Bootstrap support for C4LZF9 as seed ortholog is 79%.
Bootstrap support for H3GIW2 as seed ortholog is 73%.
Alternative seed ortholog is H3G804 (20 bits away from this cluster)

Group of orthologs #315. Best score 263 bits
Score difference with first non-orthologous sequence - E.histolytica:263 P.ramorum:139

C4M550              	100.00%		H3GNU5              	100.00%
                    	       		H3GKP9              	8.18%
                    	       		H3GTF1              	7.67%
Bootstrap support for C4M550 as seed ortholog is 100%.
Bootstrap support for H3GNU5 as seed ortholog is 99%.

Group of orthologs #316. Best score 263 bits
Score difference with first non-orthologous sequence - E.histolytica:263 P.ramorum:141

C4M0L7              	100.00%		H3GSZ7              	100.00%
Bootstrap support for C4M0L7 as seed ortholog is 100%.
Bootstrap support for H3GSZ7 as seed ortholog is 99%.

Group of orthologs #317. Best score 263 bits
Score difference with first non-orthologous sequence - E.histolytica:263 P.ramorum:263

Q5U8N1              	100.00%		H3HBV1              	100.00%
Bootstrap support for Q5U8N1 as seed ortholog is 100%.
Bootstrap support for H3HBV1 as seed ortholog is 100%.

Group of orthologs #318. Best score 262 bits
Score difference with first non-orthologous sequence - E.histolytica:262 P.ramorum:262

C4LZ30              	100.00%		H3GAV2              	100.00%
Bootstrap support for C4LZ30 as seed ortholog is 100%.
Bootstrap support for H3GAV2 as seed ortholog is 100%.

Group of orthologs #319. Best score 261 bits
Score difference with first non-orthologous sequence - E.histolytica:261 P.ramorum:261

C4M0R0              	100.00%		H3G7E6              	100.00%
Bootstrap support for C4M0R0 as seed ortholog is 100%.
Bootstrap support for H3G7E6 as seed ortholog is 100%.

Group of orthologs #320. Best score 260 bits
Score difference with first non-orthologous sequence - E.histolytica:260 P.ramorum:200

Q86S08              	100.00%		H3G9V6              	100.00%
C4LSV1              	89.16%		
Q86S07              	12.39%		
Bootstrap support for Q86S08 as seed ortholog is 100%.
Bootstrap support for H3G9V6 as seed ortholog is 100%.

Group of orthologs #321. Best score 259 bits
Score difference with first non-orthologous sequence - E.histolytica:259 P.ramorum:259

C4LT44              	100.00%		H3GLH2              	100.00%
Bootstrap support for C4LT44 as seed ortholog is 100%.
Bootstrap support for H3GLH2 as seed ortholog is 100%.

Group of orthologs #322. Best score 259 bits
Score difference with first non-orthologous sequence - E.histolytica:259 P.ramorum:259

C4M648              	100.00%		H3G9X4              	100.00%
Bootstrap support for C4M648 as seed ortholog is 100%.
Bootstrap support for H3G9X4 as seed ortholog is 100%.

Group of orthologs #323. Best score 258 bits
Score difference with first non-orthologous sequence - E.histolytica:258 P.ramorum:258

C4LT02              	100.00%		H3G9T2              	100.00%
Bootstrap support for C4LT02 as seed ortholog is 100%.
Bootstrap support for H3G9T2 as seed ortholog is 100%.

Group of orthologs #324. Best score 258 bits
Score difference with first non-orthologous sequence - E.histolytica:258 P.ramorum:81

C4M0P6              	100.00%		H3GBX2              	100.00%
Bootstrap support for C4M0P6 as seed ortholog is 100%.
Bootstrap support for H3GBX2 as seed ortholog is 96%.

Group of orthologs #325. Best score 257 bits
Score difference with first non-orthologous sequence - E.histolytica:257 P.ramorum:165

C4LYD9              	100.00%		H3GKC1              	100.00%
                    	       		H3GKC2              	96.36%
                    	       		H3GKC0              	69.58%
                    	       		H3GKB7              	69.00%
Bootstrap support for C4LYD9 as seed ortholog is 100%.
Bootstrap support for H3GKC1 as seed ortholog is 99%.

Group of orthologs #326. Best score 257 bits
Score difference with first non-orthologous sequence - E.histolytica:257 P.ramorum:205

C4M2J5              	100.00%		H3G7W7              	100.00%
Bootstrap support for C4M2J5 as seed ortholog is 100%.
Bootstrap support for H3G7W7 as seed ortholog is 100%.

Group of orthologs #327. Best score 256 bits
Score difference with first non-orthologous sequence - E.histolytica:100 P.ramorum:72

C4LV99              	100.00%		H3GA13              	100.00%
C4LVR7              	37.93%		H3HAB9              	70.88%
Bootstrap support for C4LV99 as seed ortholog is 98%.
Bootstrap support for H3GA13 as seed ortholog is 95%.

Group of orthologs #328. Best score 255 bits
Score difference with first non-orthologous sequence - E.histolytica:255 P.ramorum:255

C4LUU1              	100.00%		H3GWU9              	100.00%
Bootstrap support for C4LUU1 as seed ortholog is 100%.
Bootstrap support for H3GWU9 as seed ortholog is 100%.

Group of orthologs #329. Best score 255 bits
Score difference with first non-orthologous sequence - E.histolytica:255 P.ramorum:255

C4M1U1              	100.00%		H3GZX2              	100.00%
Bootstrap support for C4M1U1 as seed ortholog is 100%.
Bootstrap support for H3GZX2 as seed ortholog is 100%.

Group of orthologs #330. Best score 254 bits
Score difference with first non-orthologous sequence - E.histolytica:254 P.ramorum:47

C4LY91              	100.00%		H3GS65              	100.00%
Bootstrap support for C4LY91 as seed ortholog is 100%.
Bootstrap support for H3GS65 as seed ortholog is 79%.

Group of orthologs #331. Best score 252 bits
Score difference with first non-orthologous sequence - E.histolytica:252 P.ramorum:22

Q70S43              	100.00%		H3GMF2              	100.00%
C4LVQ3              	51.55%		
Bootstrap support for Q70S43 as seed ortholog is 100%.
Bootstrap support for H3GMF2 as seed ortholog is 72%.
Alternative seed ortholog is H3H2K8 (22 bits away from this cluster)

Group of orthologs #332. Best score 252 bits
Score difference with first non-orthologous sequence - E.histolytica:54 P.ramorum:35

C4M831              	100.00%		H3G4Z5              	100.00%
Bootstrap support for C4M831 as seed ortholog is 93%.
Bootstrap support for H3G4Z5 as seed ortholog is 84%.

Group of orthologs #333. Best score 251 bits
Score difference with first non-orthologous sequence - E.histolytica:251 P.ramorum:251

C4M049              	100.00%		H3G8A9              	100.00%
C4MBI8              	8.24%		
Bootstrap support for C4M049 as seed ortholog is 100%.
Bootstrap support for H3G8A9 as seed ortholog is 100%.

Group of orthologs #334. Best score 251 bits
Score difference with first non-orthologous sequence - E.histolytica:176 P.ramorum:251

C4M8Z1              	100.00%		H3G8B8              	100.00%
Bootstrap support for C4M8Z1 as seed ortholog is 100%.
Bootstrap support for H3G8B8 as seed ortholog is 100%.

Group of orthologs #335. Best score 250 bits
Score difference with first non-orthologous sequence - E.histolytica:250 P.ramorum:250

C4LUV6              	100.00%		H3GUP5              	100.00%
C4LTU4              	20.43%		
Bootstrap support for C4LUV6 as seed ortholog is 100%.
Bootstrap support for H3GUP5 as seed ortholog is 100%.

Group of orthologs #336. Best score 250 bits
Score difference with first non-orthologous sequence - E.histolytica:196 P.ramorum:195

C4M2P0              	100.00%		H3GFI2              	100.00%
Bootstrap support for C4M2P0 as seed ortholog is 100%.
Bootstrap support for H3GFI2 as seed ortholog is 100%.

Group of orthologs #337. Best score 249 bits
Score difference with first non-orthologous sequence - E.histolytica:249 P.ramorum:249

C4LV41              	100.00%		H3G7P3              	100.00%
Bootstrap support for C4LV41 as seed ortholog is 100%.
Bootstrap support for H3G7P3 as seed ortholog is 100%.

Group of orthologs #338. Best score 249 bits
Score difference with first non-orthologous sequence - E.histolytica:249 P.ramorum:249

C4LUT3              	100.00%		H3GRC1              	100.00%
Bootstrap support for C4LUT3 as seed ortholog is 100%.
Bootstrap support for H3GRC1 as seed ortholog is 100%.

Group of orthologs #339. Best score 248 bits
Score difference with first non-orthologous sequence - E.histolytica:248 P.ramorum:248

B1N2I7              	100.00%		H3GAM0              	100.00%
Bootstrap support for B1N2I7 as seed ortholog is 100%.
Bootstrap support for H3GAM0 as seed ortholog is 100%.

Group of orthologs #340. Best score 248 bits
Score difference with first non-orthologous sequence - E.histolytica:248 P.ramorum:248

C4M090              	100.00%		H3G854              	100.00%
Bootstrap support for C4M090 as seed ortholog is 100%.
Bootstrap support for H3G854 as seed ortholog is 100%.

Group of orthologs #341. Best score 248 bits
Score difference with first non-orthologous sequence - E.histolytica:248 P.ramorum:248

C4M659              	100.00%		H3G6M9              	100.00%
Bootstrap support for C4M659 as seed ortholog is 100%.
Bootstrap support for H3G6M9 as seed ortholog is 100%.

Group of orthologs #342. Best score 248 bits
Score difference with first non-orthologous sequence - E.histolytica:6 P.ramorum:41

C4MA07              	100.00%		H3G8X5              	100.00%
Bootstrap support for C4MA07 as seed ortholog is 66%.
Alternative seed ortholog is Q9BLF3 (6 bits away from this cluster)
Bootstrap support for H3G8X5 as seed ortholog is 95%.

Group of orthologs #343. Best score 247 bits
Score difference with first non-orthologous sequence - E.histolytica:247 P.ramorum:60

C4M7I3              	100.00%		H3H5H8              	100.00%
                    	       		H3GYZ4              	93.47%
                    	       		H3GYZ7              	86.99%
                    	       		H3GZ00              	78.11%
                    	       		H3GWY5              	66.11%
                    	       		H3GYZ5              	61.88%
                    	       		H3GK29              	49.40%
                    	       		H3GSM3              	47.77%
                    	       		H3GIJ8              	16.99%
                    	       		H3GH74              	16.75%
Bootstrap support for C4M7I3 as seed ortholog is 100%.
Bootstrap support for H3H5H8 as seed ortholog is 91%.

Group of orthologs #344. Best score 247 bits
Score difference with first non-orthologous sequence - E.histolytica:247 P.ramorum:247

C4M5U9              	100.00%		H3G859              	100.00%
C4M905              	6.39%		
Bootstrap support for C4M5U9 as seed ortholog is 100%.
Bootstrap support for H3G859 as seed ortholog is 100%.

Group of orthologs #345. Best score 247 bits
Score difference with first non-orthologous sequence - E.histolytica:247 P.ramorum:247

Q1EPX9              	100.00%		H3GSD7              	100.00%
B1N319              	8.02%		
Bootstrap support for Q1EPX9 as seed ortholog is 100%.
Bootstrap support for H3GSD7 as seed ortholog is 100%.

Group of orthologs #346. Best score 247 bits
Score difference with first non-orthologous sequence - E.histolytica:247 P.ramorum:188

C4M1D2              	100.00%		H3GA67              	100.00%
Bootstrap support for C4M1D2 as seed ortholog is 100%.
Bootstrap support for H3GA67 as seed ortholog is 99%.

Group of orthologs #347. Best score 247 bits
Score difference with first non-orthologous sequence - E.histolytica:247 P.ramorum:247

C4M632              	100.00%		H3G9I2              	100.00%
Bootstrap support for C4M632 as seed ortholog is 100%.
Bootstrap support for H3G9I2 as seed ortholog is 100%.

Group of orthologs #348. Best score 246 bits
Score difference with first non-orthologous sequence - E.histolytica:203 P.ramorum:161

C4LSP9              	100.00%		H3G8Y5              	100.00%
Bootstrap support for C4LSP9 as seed ortholog is 99%.
Bootstrap support for H3G8Y5 as seed ortholog is 99%.

Group of orthologs #349. Best score 245 bits
Score difference with first non-orthologous sequence - E.histolytica:122 P.ramorum:61

C4LW33              	100.00%		H3HE02              	100.00%
                    	       		H3H001              	65.36%
Bootstrap support for C4LW33 as seed ortholog is 99%.
Bootstrap support for H3HE02 as seed ortholog is 93%.

Group of orthologs #350. Best score 245 bits
Score difference with first non-orthologous sequence - E.histolytica:60 P.ramorum:245

C4LUH7              	100.00%		H3G7G1              	100.00%
Bootstrap support for C4LUH7 as seed ortholog is 91%.
Bootstrap support for H3G7G1 as seed ortholog is 100%.

Group of orthologs #351. Best score 245 bits
Score difference with first non-orthologous sequence - E.histolytica:106 P.ramorum:245

C4LZ37              	100.00%		H3GGA7              	100.00%
Bootstrap support for C4LZ37 as seed ortholog is 93%.
Bootstrap support for H3GGA7 as seed ortholog is 100%.

Group of orthologs #352. Best score 244 bits
Score difference with first non-orthologous sequence - E.histolytica:244 P.ramorum:108

C4LYJ7              	100.00%		H3GAH3              	100.00%
                    	       		H3H0L5              	99.33%
                    	       		H3GB79              	98.83%
                    	       		H3H6H4              	52.25%
Bootstrap support for C4LYJ7 as seed ortholog is 100%.
Bootstrap support for H3GAH3 as seed ortholog is 99%.

Group of orthologs #353. Best score 244 bits
Score difference with first non-orthologous sequence - E.histolytica:244 P.ramorum:244

C4LZG9              	100.00%		H3G8C7              	100.00%
C4LZP2              	100.00%		
Bootstrap support for C4LZG9 as seed ortholog is 100%.
Bootstrap support for C4LZP2 as seed ortholog is 100%.
Bootstrap support for H3G8C7 as seed ortholog is 100%.

Group of orthologs #354. Best score 243 bits
Score difference with first non-orthologous sequence - E.histolytica:243 P.ramorum:243

C4LTA0              	100.00%		H3G927              	100.00%
B1N5V8              	61.50%		
Bootstrap support for C4LTA0 as seed ortholog is 100%.
Bootstrap support for H3G927 as seed ortholog is 100%.

Group of orthologs #355. Best score 243 bits
Score difference with first non-orthologous sequence - E.histolytica:243 P.ramorum:243

C4LVJ7              	100.00%		H3GLH5              	100.00%
C4M0S8              	16.60%		
Bootstrap support for C4LVJ7 as seed ortholog is 100%.
Bootstrap support for H3GLH5 as seed ortholog is 100%.

Group of orthologs #356. Best score 243 bits
Score difference with first non-orthologous sequence - E.histolytica:75 P.ramorum:90

Q6AW60              	100.00%		H3G8U7              	100.00%
Q9BLE4              	14.71%		
Bootstrap support for Q6AW60 as seed ortholog is 99%.
Bootstrap support for H3G8U7 as seed ortholog is 99%.

Group of orthologs #357. Best score 243 bits
Score difference with first non-orthologous sequence - E.histolytica:106 P.ramorum:243

C4LSD5              	100.00%		H3GW58              	100.00%
C4LTH2              	20.51%		
Bootstrap support for C4LSD5 as seed ortholog is 99%.
Bootstrap support for H3GW58 as seed ortholog is 100%.

Group of orthologs #358. Best score 243 bits
Score difference with first non-orthologous sequence - E.histolytica:243 P.ramorum:243

C4LYI6              	100.00%		H3GC81              	100.00%
Bootstrap support for C4LYI6 as seed ortholog is 100%.
Bootstrap support for H3GC81 as seed ortholog is 100%.

Group of orthologs #359. Best score 243 bits
Score difference with first non-orthologous sequence - E.histolytica:243 P.ramorum:243

C4M8P4              	100.00%		H3GTZ8              	100.00%
Bootstrap support for C4M8P4 as seed ortholog is 100%.
Bootstrap support for H3GTZ8 as seed ortholog is 100%.

Group of orthologs #360. Best score 240 bits
Score difference with first non-orthologous sequence - E.histolytica:240 P.ramorum:240

C4LT81              	100.00%		H3GAN3              	100.00%
C4LVZ6              	100.00%		
Bootstrap support for C4LT81 as seed ortholog is 100%.
Bootstrap support for C4LVZ6 as seed ortholog is 100%.
Bootstrap support for H3GAN3 as seed ortholog is 100%.

Group of orthologs #361. Best score 240 bits
Score difference with first non-orthologous sequence - E.histolytica:173 P.ramorum:240

C4M6G5              	100.00%		H3G8T3              	100.00%
Bootstrap support for C4M6G5 as seed ortholog is 100%.
Bootstrap support for H3G8T3 as seed ortholog is 100%.

Group of orthologs #362. Best score 240 bits
Score difference with first non-orthologous sequence - E.histolytica:44 P.ramorum:15

O15729              	100.00%		H3G525              	100.00%
Bootstrap support for O15729 as seed ortholog is 97%.
Bootstrap support for H3G525 as seed ortholog is 75%.

Group of orthologs #363. Best score 240 bits
Score difference with first non-orthologous sequence - E.histolytica:31 P.ramorum:122

Q9BLE8              	100.00%		H3G9D1              	100.00%
Bootstrap support for Q9BLE8 as seed ortholog is 86%.
Bootstrap support for H3G9D1 as seed ortholog is 100%.

Group of orthologs #364. Best score 240 bits
Score difference with first non-orthologous sequence - E.histolytica:240 P.ramorum:240

C4M1V9              	100.00%		H3GQY6              	100.00%
Bootstrap support for C4M1V9 as seed ortholog is 100%.
Bootstrap support for H3GQY6 as seed ortholog is 100%.

Group of orthologs #365. Best score 239 bits
Score difference with first non-orthologous sequence - E.histolytica:73 P.ramorum:33

C4M983              	100.00%		H3G7G7              	100.00%
                    	       		H3GZK5              	25.61%
                    	       		H3G5B5              	25.22%
Bootstrap support for C4M983 as seed ortholog is 91%.
Bootstrap support for H3G7G7 as seed ortholog is 86%.

Group of orthologs #366. Best score 239 bits
Score difference with first non-orthologous sequence - E.histolytica:239 P.ramorum:239

C4LXF3              	100.00%		H3GHI9              	100.00%
                    	       		H3GCU1              	10.38%
Bootstrap support for C4LXF3 as seed ortholog is 100%.
Bootstrap support for H3GHI9 as seed ortholog is 100%.

Group of orthologs #367. Best score 239 bits
Score difference with first non-orthologous sequence - E.histolytica:59 P.ramorum:239

C4LWI8              	100.00%		H3GR83              	100.00%
C4M5N4              	8.94%		
Bootstrap support for C4LWI8 as seed ortholog is 89%.
Bootstrap support for H3GR83 as seed ortholog is 100%.

Group of orthologs #368. Best score 239 bits
Score difference with first non-orthologous sequence - E.histolytica:239 P.ramorum:239

C4M054              	100.00%		H3HA42              	100.00%
Bootstrap support for C4M054 as seed ortholog is 100%.
Bootstrap support for H3HA42 as seed ortholog is 100%.

Group of orthologs #369. Best score 238 bits
Score difference with first non-orthologous sequence - E.histolytica:238 P.ramorum:238

C4M5U0              	100.00%		H3GJY6              	100.00%
Bootstrap support for C4M5U0 as seed ortholog is 100%.
Bootstrap support for H3GJY6 as seed ortholog is 100%.

Group of orthologs #370. Best score 238 bits
Score difference with first non-orthologous sequence - E.histolytica:238 P.ramorum:238

C4LWT5              	100.00%		H3H1J9              	100.00%
Bootstrap support for C4LWT5 as seed ortholog is 100%.
Bootstrap support for H3H1J9 as seed ortholog is 100%.

Group of orthologs #371. Best score 237 bits
Score difference with first non-orthologous sequence - E.histolytica:66 P.ramorum:49

C4M3L9              	100.00%		H3G9B3              	100.00%
Q761X3              	13.03%		
Bootstrap support for C4M3L9 as seed ortholog is 96%.
Bootstrap support for H3G9B3 as seed ortholog is 91%.

Group of orthologs #372. Best score 236 bits
Score difference with first non-orthologous sequence - E.histolytica:62 P.ramorum:50

C4LZT5              	100.00%		H3GPH2              	100.00%
C4M1Z1              	100.00%		
C4LZU5              	6.55%		
C4M8D5              	6.20%		
Bootstrap support for C4LZT5 as seed ortholog is 92%.
Bootstrap support for C4M1Z1 as seed ortholog is 90%.
Bootstrap support for H3GPH2 as seed ortholog is 89%.

Group of orthologs #373. Best score 236 bits
Score difference with first non-orthologous sequence - E.histolytica:66 P.ramorum:53

C4M471              	100.00%		H3HE53              	100.00%
Bootstrap support for C4M471 as seed ortholog is 89%.
Bootstrap support for H3HE53 as seed ortholog is 83%.

Group of orthologs #374. Best score 235 bits
Score difference with first non-orthologous sequence - E.histolytica:111 P.ramorum:77

C4M1Q4              	100.00%		H3HBD0              	100.00%
C4LSA4              	22.75%		
C4M7G3              	16.08%		
C4LUL3              	15.88%		
Q8WQH8              	15.10%		
C4M3L5              	13.43%		
C4M6N9              	12.35%		
C4LYZ2              	12.06%		
C4MAU1              	11.47%		
C4LTI6              	10.69%		
C4M8P9              	10.39%		
C4M084              	10.10%		
C4M268              	9.71%		
C4MA75              	8.53%		
C4LX39              	8.33%		
Bootstrap support for C4M1Q4 as seed ortholog is 99%.
Bootstrap support for H3HBD0 as seed ortholog is 96%.

Group of orthologs #375. Best score 235 bits
Score difference with first non-orthologous sequence - E.histolytica:235 P.ramorum:235

C4M6Z7              	100.00%		H3G9A8              	100.00%
                    	       		H3G8F9              	56.42%
Bootstrap support for C4M6Z7 as seed ortholog is 100%.
Bootstrap support for H3G9A8 as seed ortholog is 100%.

Group of orthologs #376. Best score 235 bits
Score difference with first non-orthologous sequence - E.histolytica:235 P.ramorum:140

C4M255              	100.00%		H3H1Q7              	100.00%
C4LVV7              	92.95%		
Bootstrap support for C4M255 as seed ortholog is 100%.
Bootstrap support for H3H1Q7 as seed ortholog is 99%.

Group of orthologs #377. Best score 235 bits
Score difference with first non-orthologous sequence - E.histolytica:235 P.ramorum:235

C4M2L7              	100.00%		H3GXW6              	100.00%
Bootstrap support for C4M2L7 as seed ortholog is 100%.
Bootstrap support for H3GXW6 as seed ortholog is 100%.

Group of orthologs #378. Best score 235 bits
Score difference with first non-orthologous sequence - E.histolytica:235 P.ramorum:235

C4LZV8              	100.00%		H3HD26              	100.00%
Bootstrap support for C4LZV8 as seed ortholog is 100%.
Bootstrap support for H3HD26 as seed ortholog is 100%.

Group of orthologs #379. Best score 234 bits
Score difference with first non-orthologous sequence - E.histolytica:99 P.ramorum:234

Q53UB0              	100.00%		H3H1I2              	100.00%
B1N392              	54.68%		
Bootstrap support for Q53UB0 as seed ortholog is 99%.
Bootstrap support for H3H1I2 as seed ortholog is 100%.

Group of orthologs #380. Best score 233 bits
Score difference with first non-orthologous sequence - E.histolytica:233 P.ramorum:233

C4MA87              	100.00%		H3G6G3              	100.00%
C4M036              	94.14%		H3G7P1              	28.36%
Bootstrap support for C4MA87 as seed ortholog is 100%.
Bootstrap support for H3G6G3 as seed ortholog is 100%.

Group of orthologs #381. Best score 233 bits
Score difference with first non-orthologous sequence - E.histolytica:57 P.ramorum:41

Q5NT27              	100.00%		H3G6T1              	100.00%
Q5NT28              	100.00%		
Bootstrap support for Q5NT27 as seed ortholog is 99%.
Bootstrap support for Q5NT28 as seed ortholog is 99%.
Bootstrap support for H3G6T1 as seed ortholog is 96%.

Group of orthologs #382. Best score 233 bits
Score difference with first non-orthologous sequence - E.histolytica:233 P.ramorum:233

C4LSY7              	100.00%		H3G7L0              	100.00%
Bootstrap support for C4LSY7 as seed ortholog is 100%.
Bootstrap support for H3G7L0 as seed ortholog is 100%.

Group of orthologs #383. Best score 233 bits
Score difference with first non-orthologous sequence - E.histolytica:233 P.ramorum:233

C4M363              	100.00%		H3G8I4              	100.00%
Bootstrap support for C4M363 as seed ortholog is 100%.
Bootstrap support for H3G8I4 as seed ortholog is 100%.

Group of orthologs #384. Best score 233 bits
Score difference with first non-orthologous sequence - E.histolytica:75 P.ramorum:233

C4LWU6              	100.00%		H3H4U3              	100.00%
Bootstrap support for C4LWU6 as seed ortholog is 99%.
Bootstrap support for H3H4U3 as seed ortholog is 100%.

Group of orthologs #385. Best score 232 bits
Score difference with first non-orthologous sequence - E.histolytica:232 P.ramorum:232

C4M299              	100.00%		H3GT76              	100.00%
C4LWV7              	64.43%		
C4M3G5              	26.59%		
C4LSG2              	17.01%		
C4M9C2              	14.37%		
C4MAY5              	8.38%		
C4LTX2              	7.43%		
B1N3K7              	5.51%		
Bootstrap support for C4M299 as seed ortholog is 100%.
Bootstrap support for H3GT76 as seed ortholog is 100%.

Group of orthologs #386. Best score 232 bits
Score difference with first non-orthologous sequence - E.histolytica:232 P.ramorum:13

C4MB25              	100.00%		H3GL72              	100.00%
C4LVG9              	59.60%		H3GC96              	21.54%
Bootstrap support for C4MB25 as seed ortholog is 100%.
Bootstrap support for H3GL72 as seed ortholog is 56%.
Alternative seed ortholog is H3GBJ0 (13 bits away from this cluster)

Group of orthologs #387. Best score 232 bits
Score difference with first non-orthologous sequence - E.histolytica:104 P.ramorum:232

Q1EQ46              	100.00%		H3GK49              	100.00%
                    	       		H3GG43              	8.96%
Bootstrap support for Q1EQ46 as seed ortholog is 95%.
Bootstrap support for H3GK49 as seed ortholog is 100%.

Group of orthologs #388. Best score 230 bits
Score difference with first non-orthologous sequence - E.histolytica:230 P.ramorum:230

C4M771              	100.00%		H3G7Z2              	100.00%
Bootstrap support for C4M771 as seed ortholog is 100%.
Bootstrap support for H3G7Z2 as seed ortholog is 100%.

Group of orthologs #389. Best score 230 bits
Score difference with first non-orthologous sequence - E.histolytica:230 P.ramorum:230

Q76L89              	100.00%		H3HAT3              	100.00%
Bootstrap support for Q76L89 as seed ortholog is 100%.
Bootstrap support for H3HAT3 as seed ortholog is 100%.

Group of orthologs #390. Best score 229 bits
Score difference with first non-orthologous sequence - E.histolytica:229 P.ramorum:229

C4M1A2              	100.00%		H3GE34              	100.00%
Bootstrap support for C4M1A2 as seed ortholog is 100%.
Bootstrap support for H3GE34 as seed ortholog is 100%.

Group of orthologs #391. Best score 229 bits
Score difference with first non-orthologous sequence - E.histolytica:229 P.ramorum:229

C4LXV5              	100.00%		H3HD02              	100.00%
Bootstrap support for C4LXV5 as seed ortholog is 100%.
Bootstrap support for H3HD02 as seed ortholog is 100%.

Group of orthologs #392. Best score 228 bits
Score difference with first non-orthologous sequence - E.histolytica:228 P.ramorum:228

C4M609              	100.00%		H3G898              	100.00%
C4LTQ5              	98.57%		
Bootstrap support for C4M609 as seed ortholog is 100%.
Bootstrap support for H3G898 as seed ortholog is 100%.

Group of orthologs #393. Best score 228 bits
Score difference with first non-orthologous sequence - E.histolytica:18 P.ramorum:38

Q963D1              	100.00%		H3G5A9              	100.00%
                    	       		H3G925              	8.15%
Bootstrap support for Q963D1 as seed ortholog is 83%.
Bootstrap support for H3G5A9 as seed ortholog is 93%.

Group of orthologs #394. Best score 228 bits
Score difference with first non-orthologous sequence - E.histolytica:228 P.ramorum:128

C4M6A7              	100.00%		H3H2Y0              	100.00%
C4MA11              	12.82%		
Bootstrap support for C4M6A7 as seed ortholog is 100%.
Bootstrap support for H3H2Y0 as seed ortholog is 98%.

Group of orthologs #395. Best score 228 bits
Score difference with first non-orthologous sequence - E.histolytica:228 P.ramorum:228

C4LZP4              	100.00%		H3GTC8              	100.00%
Bootstrap support for C4LZP4 as seed ortholog is 100%.
Bootstrap support for H3GTC8 as seed ortholog is 100%.

Group of orthologs #396. Best score 227 bits
Score difference with first non-orthologous sequence - E.histolytica:227 P.ramorum:227

C4LZB0              	100.00%		H3G4X4              	100.00%
C4LXN2              	98.66%		
B1N442              	97.66%		
B1N350              	76.25%		
Bootstrap support for C4LZB0 as seed ortholog is 100%.
Bootstrap support for H3G4X4 as seed ortholog is 100%.

Group of orthologs #397. Best score 227 bits
Score difference with first non-orthologous sequence - E.histolytica:66 P.ramorum:52

C4M3E9              	100.00%		H3GXW8              	100.00%
B1N3H6              	32.09%		H3G7D1              	12.39%
Bootstrap support for C4M3E9 as seed ortholog is 92%.
Bootstrap support for H3GXW8 as seed ortholog is 87%.

Group of orthologs #398. Best score 226 bits
Score difference with first non-orthologous sequence - E.histolytica:118 P.ramorum:226

C4M981              	100.00%		H3GAR9              	100.00%
                    	       		H3GD06              	19.93%
Bootstrap support for C4M981 as seed ortholog is 99%.
Bootstrap support for H3GAR9 as seed ortholog is 100%.

Group of orthologs #399. Best score 226 bits
Score difference with first non-orthologous sequence - E.histolytica:226 P.ramorum:130

C4M7K4              	100.00%		H3G9W3              	100.00%
Bootstrap support for C4M7K4 as seed ortholog is 100%.
Bootstrap support for H3G9W3 as seed ortholog is 99%.

Group of orthologs #400. Best score 225 bits
Score difference with first non-orthologous sequence - E.histolytica:225 P.ramorum:225

C4MAW8              	100.00%		H3G9D2              	100.00%
C4M4A2              	98.92%		
Bootstrap support for C4MAW8 as seed ortholog is 100%.
Bootstrap support for H3G9D2 as seed ortholog is 100%.

Group of orthologs #401. Best score 225 bits
Score difference with first non-orthologous sequence - E.histolytica:225 P.ramorum:225

C4M572              	100.00%		H3G546              	100.00%
Bootstrap support for C4M572 as seed ortholog is 100%.
Bootstrap support for H3G546 as seed ortholog is 100%.

Group of orthologs #402. Best score 225 bits
Score difference with first non-orthologous sequence - E.histolytica:225 P.ramorum:225

C4M4V9              	100.00%		H3G6M0              	100.00%
Bootstrap support for C4M4V9 as seed ortholog is 100%.
Bootstrap support for H3G6M0 as seed ortholog is 100%.

Group of orthologs #403. Best score 225 bits
Score difference with first non-orthologous sequence - E.histolytica:12 P.ramorum:51

C4MB14              	100.00%		H3G7Z1              	100.00%
Bootstrap support for C4MB14 as seed ortholog is 65%.
Alternative seed ortholog is C4M1H4 (12 bits away from this cluster)
Bootstrap support for H3G7Z1 as seed ortholog is 94%.

Group of orthologs #404. Best score 223 bits
Score difference with first non-orthologous sequence - E.histolytica:223 P.ramorum:223

C4M4S5              	100.00%		H3GME6              	100.00%
C4M3N1              	36.82%		
Bootstrap support for C4M4S5 as seed ortholog is 100%.
Bootstrap support for H3GME6 as seed ortholog is 100%.

Group of orthologs #405. Best score 223 bits
Score difference with first non-orthologous sequence - E.histolytica:223 P.ramorum:223

C4LSB1              	100.00%		H3G9M2              	100.00%
Bootstrap support for C4LSB1 as seed ortholog is 100%.
Bootstrap support for H3G9M2 as seed ortholog is 100%.

Group of orthologs #406. Best score 220 bits
Score difference with first non-orthologous sequence - E.histolytica:124 P.ramorum:114

B1N4P1              	100.00%		H3G8B2              	100.00%
C4M4L8              	100.00%		
Bootstrap support for B1N4P1 as seed ortholog is 100%.
Bootstrap support for C4M4L8 as seed ortholog is 100%.
Bootstrap support for H3G8B2 as seed ortholog is 99%.

Group of orthologs #407. Best score 220 bits
Score difference with first non-orthologous sequence - E.histolytica:220 P.ramorum:220

C4M7U2              	100.00%		H3G980              	100.00%
Bootstrap support for C4M7U2 as seed ortholog is 100%.
Bootstrap support for H3G980 as seed ortholog is 100%.

Group of orthologs #408. Best score 220 bits
Score difference with first non-orthologous sequence - E.histolytica:129 P.ramorum:220

C4LTI7              	100.00%		H3GRS6              	100.00%
Bootstrap support for C4LTI7 as seed ortholog is 99%.
Bootstrap support for H3GRS6 as seed ortholog is 100%.

Group of orthologs #409. Best score 220 bits
Score difference with first non-orthologous sequence - E.histolytica:220 P.ramorum:220

C4M8Q0              	100.00%		H3GDK0              	100.00%
Bootstrap support for C4M8Q0 as seed ortholog is 100%.
Bootstrap support for H3GDK0 as seed ortholog is 100%.

Group of orthologs #410. Best score 220 bits
Score difference with first non-orthologous sequence - E.histolytica:136 P.ramorum:99

C4M1X1              	100.00%		H3H0M5              	100.00%
Bootstrap support for C4M1X1 as seed ortholog is 99%.
Bootstrap support for H3H0M5 as seed ortholog is 99%.

Group of orthologs #411. Best score 219 bits
Score difference with first non-orthologous sequence - E.histolytica:219 P.ramorum:219

C4LTB5              	100.00%		H3GNT1              	100.00%
C4LYJ9              	100.00%		
Bootstrap support for C4LTB5 as seed ortholog is 100%.
Bootstrap support for C4LYJ9 as seed ortholog is 100%.
Bootstrap support for H3GNT1 as seed ortholog is 100%.

Group of orthologs #412. Best score 219 bits
Score difference with first non-orthologous sequence - E.histolytica:219 P.ramorum:219

C4M483              	100.00%		H3GA02              	100.00%
Bootstrap support for C4M483 as seed ortholog is 100%.
Bootstrap support for H3GA02 as seed ortholog is 100%.

Group of orthologs #413. Best score 218 bits
Score difference with first non-orthologous sequence - E.histolytica:150 P.ramorum:218

C4LYB5              	100.00%		H3G5M2              	100.00%
Bootstrap support for C4LYB5 as seed ortholog is 100%.
Bootstrap support for H3G5M2 as seed ortholog is 100%.

Group of orthologs #414. Best score 217 bits
Score difference with first non-orthologous sequence - E.histolytica:217 P.ramorum:217

C4M096              	100.00%		H3G9D8              	100.00%
B1N371              	37.18%		
Bootstrap support for C4M096 as seed ortholog is 100%.
Bootstrap support for H3G9D8 as seed ortholog is 100%.

Group of orthologs #415. Best score 217 bits
Score difference with first non-orthologous sequence - E.histolytica:217 P.ramorum:217

C4M003              	100.00%		H3G8F2              	100.00%
Bootstrap support for C4M003 as seed ortholog is 100%.
Bootstrap support for H3G8F2 as seed ortholog is 100%.

Group of orthologs #416. Best score 217 bits
Score difference with first non-orthologous sequence - E.histolytica:35 P.ramorum:48

Q1EQ54              	100.00%		H3G9M4              	100.00%
Bootstrap support for Q1EQ54 as seed ortholog is 94%.
Bootstrap support for H3G9M4 as seed ortholog is 99%.

Group of orthologs #417. Best score 216 bits
Score difference with first non-orthologous sequence - E.histolytica:166 P.ramorum:112

C4M451              	100.00%		H3G7T3              	100.00%
Bootstrap support for C4M451 as seed ortholog is 100%.
Bootstrap support for H3G7T3 as seed ortholog is 99%.

Group of orthologs #418. Best score 215 bits
Score difference with first non-orthologous sequence - E.histolytica:215 P.ramorum:215

C4LW32              	100.00%		H3HAU2              	100.00%
                    	       		H3HCH5              	12.65%
Bootstrap support for C4LW32 as seed ortholog is 100%.
Bootstrap support for H3HAU2 as seed ortholog is 100%.

Group of orthologs #419. Best score 215 bits
Score difference with first non-orthologous sequence - E.histolytica:215 P.ramorum:215

C4M6M5              	100.00%		H3G8Y1              	100.00%
Bootstrap support for C4M6M5 as seed ortholog is 100%.
Bootstrap support for H3G8Y1 as seed ortholog is 100%.

Group of orthologs #420. Best score 215 bits
Score difference with first non-orthologous sequence - E.histolytica:215 P.ramorum:215

C4M3P7              	100.00%		H3GHE4              	100.00%
Bootstrap support for C4M3P7 as seed ortholog is 100%.
Bootstrap support for H3GHE4 as seed ortholog is 100%.

Group of orthologs #421. Best score 215 bits
Score difference with first non-orthologous sequence - E.histolytica:215 P.ramorum:215

C4M930              	100.00%		H3GVK0              	100.00%
Bootstrap support for C4M930 as seed ortholog is 100%.
Bootstrap support for H3GVK0 as seed ortholog is 100%.

Group of orthologs #422. Best score 214 bits
Score difference with first non-orthologous sequence - E.histolytica:214 P.ramorum:214

C4M773              	100.00%		H3GXW5              	100.00%
                    	       		H3GXX2              	19.50%
Bootstrap support for C4M773 as seed ortholog is 100%.
Bootstrap support for H3GXW5 as seed ortholog is 100%.

Group of orthologs #423. Best score 214 bits
Score difference with first non-orthologous sequence - E.histolytica:214 P.ramorum:214

Q1EPY3              	100.00%		H3GEU2              	100.00%
Bootstrap support for Q1EPY3 as seed ortholog is 100%.
Bootstrap support for H3GEU2 as seed ortholog is 100%.

Group of orthologs #424. Best score 213 bits
Score difference with first non-orthologous sequence - E.histolytica:213 P.ramorum:213

C4LW00              	100.00%		H3GD55              	100.00%
Bootstrap support for C4LW00 as seed ortholog is 100%.
Bootstrap support for H3GD55 as seed ortholog is 100%.

Group of orthologs #425. Best score 213 bits
Score difference with first non-orthologous sequence - E.histolytica:213 P.ramorum:213

C4M0A4              	100.00%		H3GA62              	100.00%
Bootstrap support for C4M0A4 as seed ortholog is 100%.
Bootstrap support for H3GA62 as seed ortholog is 100%.

Group of orthologs #426. Best score 212 bits
Score difference with first non-orthologous sequence - E.histolytica:212 P.ramorum:212

B1N2I3              	100.00%		H3G7S0              	100.00%
Bootstrap support for B1N2I3 as seed ortholog is 100%.
Bootstrap support for H3G7S0 as seed ortholog is 100%.

Group of orthologs #427. Best score 212 bits
Score difference with first non-orthologous sequence - E.histolytica:212 P.ramorum:212

B1N3N6              	100.00%		H3GH31              	100.00%
Bootstrap support for B1N3N6 as seed ortholog is 100%.
Bootstrap support for H3GH31 as seed ortholog is 100%.

Group of orthologs #428. Best score 212 bits
Score difference with first non-orthologous sequence - E.histolytica:212 P.ramorum:212

C4M0L5              	100.00%		H3GNQ3              	100.00%
Bootstrap support for C4M0L5 as seed ortholog is 100%.
Bootstrap support for H3GNQ3 as seed ortholog is 100%.

Group of orthologs #429. Best score 212 bits
Score difference with first non-orthologous sequence - E.histolytica:212 P.ramorum:212

C4LY41              	100.00%		H3H1H9              	100.00%
Bootstrap support for C4LY41 as seed ortholog is 100%.
Bootstrap support for H3H1H9 as seed ortholog is 100%.

Group of orthologs #430. Best score 211 bits
Score difference with first non-orthologous sequence - E.histolytica:211 P.ramorum:165

C4M921              	100.00%		H3GS12              	100.00%
C4LXP4              	10.89%		
Bootstrap support for C4M921 as seed ortholog is 100%.
Bootstrap support for H3GS12 as seed ortholog is 99%.

Group of orthologs #431. Best score 211 bits
Score difference with first non-orthologous sequence - E.histolytica:211 P.ramorum:211

C4M298              	100.00%		H3H2P4              	100.00%
Bootstrap support for C4M298 as seed ortholog is 100%.
Bootstrap support for H3H2P4 as seed ortholog is 100%.

Group of orthologs #432. Best score 210 bits
Score difference with first non-orthologous sequence - E.histolytica:210 P.ramorum:210

B1N3R9              	100.00%		H3G5N0              	100.00%
C4LVH6              	100.00%		
Bootstrap support for B1N3R9 as seed ortholog is 100%.
Bootstrap support for C4LVH6 as seed ortholog is 100%.
Bootstrap support for H3G5N0 as seed ortholog is 100%.

Group of orthologs #433. Best score 210 bits
Score difference with first non-orthologous sequence - E.histolytica:117 P.ramorum:118

C4M1V0              	100.00%		H3G9C7              	100.00%
Bootstrap support for C4M1V0 as seed ortholog is 100%.
Bootstrap support for H3G9C7 as seed ortholog is 100%.

Group of orthologs #434. Best score 210 bits
Score difference with first non-orthologous sequence - E.histolytica:142 P.ramorum:210

C4M7X7              	100.00%		H3G955              	100.00%
Bootstrap support for C4M7X7 as seed ortholog is 100%.
Bootstrap support for H3G955 as seed ortholog is 100%.

Group of orthologs #435. Best score 210 bits
Score difference with first non-orthologous sequence - E.histolytica:210 P.ramorum:210

C4M9D5              	100.00%		H3GXH4              	100.00%
Bootstrap support for C4M9D5 as seed ortholog is 100%.
Bootstrap support for H3GXH4 as seed ortholog is 100%.

Group of orthologs #436. Best score 209 bits
Score difference with first non-orthologous sequence - E.histolytica:110 P.ramorum:147

C4M0U9              	100.00%		H3GS52              	100.00%
C4M7U4              	13.34%		H3GS51              	65.69%
                    	       		H3HDP6              	17.89%
                    	       		H3HCC3              	12.01%
                    	       		H3GNG8              	6.74%
Bootstrap support for C4M0U9 as seed ortholog is 98%.
Bootstrap support for H3GS52 as seed ortholog is 99%.

Group of orthologs #437. Best score 209 bits
Score difference with first non-orthologous sequence - E.histolytica:209 P.ramorum:209

C4M1I1              	100.00%		H3GA55              	100.00%
Bootstrap support for C4M1I1 as seed ortholog is 100%.
Bootstrap support for H3GA55 as seed ortholog is 100%.

Group of orthologs #438. Best score 209 bits
Score difference with first non-orthologous sequence - E.histolytica:45 P.ramorum:109

C4M2Y3              	100.00%		H3GA22              	100.00%
Bootstrap support for C4M2Y3 as seed ortholog is 97%.
Bootstrap support for H3GA22 as seed ortholog is 99%.

Group of orthologs #439. Best score 209 bits
Score difference with first non-orthologous sequence - E.histolytica:209 P.ramorum:106

C4M2F9              	100.00%		H3GS79              	100.00%
Bootstrap support for C4M2F9 as seed ortholog is 100%.
Bootstrap support for H3GS79 as seed ortholog is 99%.

Group of orthologs #440. Best score 208 bits
Score difference with first non-orthologous sequence - E.histolytica:75 P.ramorum:36

C4M6B2              	100.00%		H3GFE9              	100.00%
C4M926              	100.00%		
C4LZ38              	26.91%		
Bootstrap support for C4M6B2 as seed ortholog is 99%.
Bootstrap support for C4M926 as seed ortholog is 98%.
Bootstrap support for H3GFE9 as seed ortholog is 87%.

Group of orthologs #441. Best score 208 bits
Score difference with first non-orthologous sequence - E.histolytica:208 P.ramorum:208

C4LZM7              	100.00%		H3G913              	100.00%
Bootstrap support for C4LZM7 as seed ortholog is 100%.
Bootstrap support for H3G913 as seed ortholog is 100%.

Group of orthologs #442. Best score 208 bits
Score difference with first non-orthologous sequence - E.histolytica:208 P.ramorum:208

C4LZL4              	100.00%		H3GHW8              	100.00%
Bootstrap support for C4LZL4 as seed ortholog is 100%.
Bootstrap support for H3GHW8 as seed ortholog is 100%.

Group of orthologs #443. Best score 207 bits
Score difference with first non-orthologous sequence - E.histolytica:207 P.ramorum:100

Q1EQ15              	100.00%		H3G7T8              	100.00%
Bootstrap support for Q1EQ15 as seed ortholog is 100%.
Bootstrap support for H3G7T8 as seed ortholog is 98%.

Group of orthologs #444. Best score 206 bits
Score difference with first non-orthologous sequence - E.histolytica:206 P.ramorum:206

C4LU86              	100.00%		H3G5G6              	100.00%
C4LWJ4              	100.00%		
Bootstrap support for C4LU86 as seed ortholog is 100%.
Bootstrap support for C4LWJ4 as seed ortholog is 100%.
Bootstrap support for H3G5G6 as seed ortholog is 100%.

Group of orthologs #445. Best score 205 bits
Score difference with first non-orthologous sequence - E.histolytica:205 P.ramorum:205

B1N5L2              	100.00%		H3G7J5              	100.00%
B1N398              	91.67%		
B1N5M8              	38.10%		
Bootstrap support for B1N5L2 as seed ortholog is 100%.
Bootstrap support for H3G7J5 as seed ortholog is 100%.

Group of orthologs #446. Best score 205 bits
Score difference with first non-orthologous sequence - E.histolytica:205 P.ramorum:129

Q58P26              	100.00%		H3G760              	100.00%
                    	       		H3G989              	22.02%
Bootstrap support for Q58P26 as seed ortholog is 100%.
Bootstrap support for H3G760 as seed ortholog is 99%.

Group of orthologs #447. Best score 205 bits
Score difference with first non-orthologous sequence - E.histolytica:205 P.ramorum:205

C4M1C3              	100.00%		H3G8B6              	100.00%
Bootstrap support for C4M1C3 as seed ortholog is 100%.
Bootstrap support for H3G8B6 as seed ortholog is 100%.

Group of orthologs #448. Best score 204 bits
Score difference with first non-orthologous sequence - E.histolytica:204 P.ramorum:204

Q56AY2              	100.00%		H3GB12              	100.00%
C4LZS1              	68.10%		H3G596              	88.10%
Bootstrap support for Q56AY2 as seed ortholog is 100%.
Bootstrap support for H3GB12 as seed ortholog is 100%.

Group of orthologs #449. Best score 203 bits
Score difference with first non-orthologous sequence - E.histolytica:203 P.ramorum:203

C4M0G3              	100.00%		H3G7N8              	100.00%
Bootstrap support for C4M0G3 as seed ortholog is 100%.
Bootstrap support for H3G7N8 as seed ortholog is 100%.

Group of orthologs #450. Best score 203 bits
Score difference with first non-orthologous sequence - E.histolytica:203 P.ramorum:203

C4M2C2              	100.00%		H3GV85              	100.00%
Bootstrap support for C4M2C2 as seed ortholog is 100%.
Bootstrap support for H3GV85 as seed ortholog is 100%.

Group of orthologs #451. Best score 203 bits
Score difference with first non-orthologous sequence - E.histolytica:203 P.ramorum:203

C4LWX7              	100.00%		H3H5G2              	100.00%
Bootstrap support for C4LWX7 as seed ortholog is 100%.
Bootstrap support for H3H5G2 as seed ortholog is 100%.

Group of orthologs #452. Best score 202 bits
Score difference with first non-orthologous sequence - E.histolytica:202 P.ramorum:202

C4LVF7              	100.00%		H3H2T7              	100.00%
C4M4F2              	100.00%		H3GZX0              	10.13%
Bootstrap support for C4LVF7 as seed ortholog is 100%.
Bootstrap support for C4M4F2 as seed ortholog is 100%.
Bootstrap support for H3H2T7 as seed ortholog is 100%.

Group of orthologs #453. Best score 201 bits
Score difference with first non-orthologous sequence - E.histolytica:34 P.ramorum:201

C4LSY6              	100.00%		H3G975              	100.00%
                    	       		H3G8W1              	17.55%
Bootstrap support for C4LSY6 as seed ortholog is 79%.
Bootstrap support for H3G975 as seed ortholog is 100%.

Group of orthologs #454. Best score 201 bits
Score difference with first non-orthologous sequence - E.histolytica:201 P.ramorum:201

C4LSH9              	100.00%		H3GD86              	100.00%
Bootstrap support for C4LSH9 as seed ortholog is 100%.
Bootstrap support for H3GD86 as seed ortholog is 100%.

Group of orthologs #455. Best score 201 bits
Score difference with first non-orthologous sequence - E.histolytica:201 P.ramorum:201

C4M2J8              	100.00%		H3GRM8              	100.00%
Bootstrap support for C4M2J8 as seed ortholog is 100%.
Bootstrap support for H3GRM8 as seed ortholog is 100%.

Group of orthologs #456. Best score 200 bits
Score difference with first non-orthologous sequence - E.histolytica:200 P.ramorum:200

C4LVB0              	100.00%		H3G962              	100.00%
Bootstrap support for C4LVB0 as seed ortholog is 100%.
Bootstrap support for H3G962 as seed ortholog is 100%.

Group of orthologs #457. Best score 200 bits
Score difference with first non-orthologous sequence - E.histolytica:95 P.ramorum:200

C4M4D8              	100.00%		H3G5Y3              	100.00%
Bootstrap support for C4M4D8 as seed ortholog is 99%.
Bootstrap support for H3G5Y3 as seed ortholog is 100%.

Group of orthologs #458. Best score 200 bits
Score difference with first non-orthologous sequence - E.histolytica:200 P.ramorum:200

C4LYG8              	100.00%		H3GM70              	100.00%
Bootstrap support for C4LYG8 as seed ortholog is 100%.
Bootstrap support for H3GM70 as seed ortholog is 100%.

Group of orthologs #459. Best score 200 bits
Score difference with first non-orthologous sequence - E.histolytica:200 P.ramorum:200

C4LZN4              	100.00%		H3GSJ6              	100.00%
Bootstrap support for C4LZN4 as seed ortholog is 100%.
Bootstrap support for H3GSJ6 as seed ortholog is 100%.

Group of orthologs #460. Best score 199 bits
Score difference with first non-orthologous sequence - E.histolytica:199 P.ramorum:199

C4LV67              	100.00%		H3G601              	100.00%
Bootstrap support for C4LV67 as seed ortholog is 100%.
Bootstrap support for H3G601 as seed ortholog is 100%.

Group of orthologs #461. Best score 199 bits
Score difference with first non-orthologous sequence - E.histolytica:26 P.ramorum:49

C4LX38              	100.00%		H3G969              	100.00%
Bootstrap support for C4LX38 as seed ortholog is 82%.
Bootstrap support for H3G969 as seed ortholog is 94%.

Group of orthologs #462. Best score 199 bits
Score difference with first non-orthologous sequence - E.histolytica:23 P.ramorum:88

C4M911              	100.00%		H3G8P2              	100.00%
Bootstrap support for C4M911 as seed ortholog is 85%.
Bootstrap support for H3G8P2 as seed ortholog is 99%.

Group of orthologs #463. Best score 198 bits
Score difference with first non-orthologous sequence - E.histolytica:198 P.ramorum:198

C4LZ42              	100.00%		H3G6N3              	100.00%
C4M367              	80.83%		
Bootstrap support for C4LZ42 as seed ortholog is 100%.
Bootstrap support for H3G6N3 as seed ortholog is 100%.

Group of orthologs #464. Best score 198 bits
Score difference with first non-orthologous sequence - E.histolytica:198 P.ramorum:198

C4LXX7              	100.00%		H3G9F0              	100.00%
C4M9M7              	94.06%		
Bootstrap support for C4LXX7 as seed ortholog is 100%.
Bootstrap support for H3G9F0 as seed ortholog is 100%.

Group of orthologs #465. Best score 198 bits
Score difference with first non-orthologous sequence - E.histolytica:198 P.ramorum:198

C4LTI2              	100.00%		H3G5S7              	100.00%
Bootstrap support for C4LTI2 as seed ortholog is 100%.
Bootstrap support for H3G5S7 as seed ortholog is 100%.

Group of orthologs #466. Best score 197 bits
Score difference with first non-orthologous sequence - E.histolytica:197 P.ramorum:197

C4LXA2              	100.00%		H3G7J8              	100.00%
Bootstrap support for C4LXA2 as seed ortholog is 100%.
Bootstrap support for H3G7J8 as seed ortholog is 100%.

Group of orthologs #467. Best score 197 bits
Score difference with first non-orthologous sequence - E.histolytica:48 P.ramorum:27

Q9BLE9              	100.00%		H3G9M6              	100.00%
Bootstrap support for Q9BLE9 as seed ortholog is 97%.
Bootstrap support for H3G9M6 as seed ortholog is 88%.

Group of orthologs #468. Best score 197 bits
Score difference with first non-orthologous sequence - E.histolytica:197 P.ramorum:197

C4M3H9              	100.00%		H3GXX6              	100.00%
Bootstrap support for C4M3H9 as seed ortholog is 100%.
Bootstrap support for H3GXX6 as seed ortholog is 100%.

Group of orthologs #469. Best score 196 bits
Score difference with first non-orthologous sequence - E.histolytica:196 P.ramorum:196

C4LUZ2              	100.00%		H3G7F6              	100.00%
Bootstrap support for C4LUZ2 as seed ortholog is 100%.
Bootstrap support for H3G7F6 as seed ortholog is 100%.

Group of orthologs #470. Best score 196 bits
Score difference with first non-orthologous sequence - E.histolytica:196 P.ramorum:196

C4M998              	100.00%		H3H0W7              	100.00%
Bootstrap support for C4M998 as seed ortholog is 100%.
Bootstrap support for H3H0W7 as seed ortholog is 100%.

Group of orthologs #471. Best score 195 bits
Score difference with first non-orthologous sequence - E.histolytica:195 P.ramorum:195

C4M8Z4              	100.00%		H3H0X1              	100.00%
Q6Y0Y5              	7.28%		
C4M4G0              	6.74%		
Bootstrap support for C4M8Z4 as seed ortholog is 100%.
Bootstrap support for H3H0X1 as seed ortholog is 100%.

Group of orthologs #472. Best score 195 bits
Score difference with first non-orthologous sequence - E.histolytica:124 P.ramorum:152

C4LUJ2              	100.00%		H3GM71              	100.00%
Bootstrap support for C4LUJ2 as seed ortholog is 99%.
Bootstrap support for H3GM71 as seed ortholog is 99%.

Group of orthologs #473. Best score 195 bits
Score difference with first non-orthologous sequence - E.histolytica:195 P.ramorum:195

C4M295              	100.00%		H3GRP6              	100.00%
Bootstrap support for C4M295 as seed ortholog is 100%.
Bootstrap support for H3GRP6 as seed ortholog is 100%.

Group of orthologs #474. Best score 194 bits
Score difference with first non-orthologous sequence - E.histolytica:194 P.ramorum:10

C4MBP3              	100.00%		H3HC76              	100.00%
B1N5A8              	98.71%		H3G9V0              	11.30%
C4MA54              	96.44%		
C4M8W7              	96.12%		
C4M3Q0              	95.79%		
C4M6Q4              	93.20%		
C4MAR7              	91.26%		
B1N5L9              	78.64%		
B1N623              	66.34%		
B1N5Y9              	25.24%		
Bootstrap support for C4MBP3 as seed ortholog is 100%.
Bootstrap support for H3HC76 as seed ortholog is 63%.
Alternative seed ortholog is H3G9V3 (10 bits away from this cluster)

Group of orthologs #475. Best score 194 bits
Score difference with first non-orthologous sequence - E.histolytica:194 P.ramorum:194

C4LYX8              	100.00%		H3G7S5              	100.00%
                    	       		H3G6L1              	96.48%
Bootstrap support for C4LYX8 as seed ortholog is 100%.
Bootstrap support for H3G7S5 as seed ortholog is 100%.

Group of orthologs #476. Best score 194 bits
Score difference with first non-orthologous sequence - E.histolytica:194 P.ramorum:194

C4M2K7              	100.00%		H3H1A3              	100.00%
                    	       		H3GD15              	7.61%
Bootstrap support for C4M2K7 as seed ortholog is 100%.
Bootstrap support for H3H1A3 as seed ortholog is 100%.

Group of orthologs #477. Best score 194 bits
Score difference with first non-orthologous sequence - E.histolytica:194 P.ramorum:194

Q1EQ51              	100.00%		H3GVL6              	100.00%
Bootstrap support for Q1EQ51 as seed ortholog is 100%.
Bootstrap support for H3GVL6 as seed ortholog is 100%.

Group of orthologs #478. Best score 193 bits
Score difference with first non-orthologous sequence - E.histolytica:193 P.ramorum:193

B1N420              	100.00%		H3G7U4              	100.00%
B1N3F8              	96.80%		
C4M7V3              	71.20%		
Bootstrap support for B1N420 as seed ortholog is 100%.
Bootstrap support for H3G7U4 as seed ortholog is 100%.

Group of orthologs #479. Best score 193 bits
Score difference with first non-orthologous sequence - E.histolytica:193 P.ramorum:104

C4LTD9              	100.00%		H3G9C0              	100.00%
Bootstrap support for C4LTD9 as seed ortholog is 100%.
Bootstrap support for H3G9C0 as seed ortholog is 100%.

Group of orthologs #480. Best score 193 bits
Score difference with first non-orthologous sequence - E.histolytica:139 P.ramorum:193

C4LZF4              	100.00%		H3G9X3              	100.00%
Bootstrap support for C4LZF4 as seed ortholog is 100%.
Bootstrap support for H3G9X3 as seed ortholog is 100%.

Group of orthologs #481. Best score 193 bits
Score difference with first non-orthologous sequence - E.histolytica:74 P.ramorum:99

C4LU84              	100.00%		H3GFH2              	100.00%
Bootstrap support for C4LU84 as seed ortholog is 96%.
Bootstrap support for H3GFH2 as seed ortholog is 99%.

Group of orthologs #482. Best score 193 bits
Score difference with first non-orthologous sequence - E.histolytica:193 P.ramorum:137

C4M6Z5              	100.00%		H3G5E0              	100.00%
Bootstrap support for C4M6Z5 as seed ortholog is 100%.
Bootstrap support for H3G5E0 as seed ortholog is 100%.

Group of orthologs #483. Best score 193 bits
Score difference with first non-orthologous sequence - E.histolytica:193 P.ramorum:193

C4M2T0              	100.00%		H3GQC7              	100.00%
Bootstrap support for C4M2T0 as seed ortholog is 100%.
Bootstrap support for H3GQC7 as seed ortholog is 100%.

Group of orthologs #484. Best score 192 bits
Score difference with first non-orthologous sequence - E.histolytica:192 P.ramorum:192

C4M8B9              	100.00%		H3H1B5              	100.00%
C4LXG0              	46.97%		
Bootstrap support for C4M8B9 as seed ortholog is 100%.
Bootstrap support for H3H1B5 as seed ortholog is 100%.

Group of orthologs #485. Best score 191 bits
Score difference with first non-orthologous sequence - E.histolytica:191 P.ramorum:191

B1N316              	100.00%		H3G8T5              	100.00%
C4LZP6              	100.00%		
C4M2R7              	100.00%		
Bootstrap support for B1N316 as seed ortholog is 100%.
Bootstrap support for C4LZP6 as seed ortholog is 100%.
Bootstrap support for C4M2R7 as seed ortholog is 100%.
Bootstrap support for H3G8T5 as seed ortholog is 100%.

Group of orthologs #486. Best score 191 bits
Score difference with first non-orthologous sequence - E.histolytica:191 P.ramorum:191

C4M0Q2              	100.00%		H3G699              	100.00%
C4M8Y8              	100.00%		
C4MAX2              	59.64%		
Bootstrap support for C4M0Q2 as seed ortholog is 100%.
Bootstrap support for C4M8Y8 as seed ortholog is 100%.
Bootstrap support for H3G699 as seed ortholog is 100%.

Group of orthologs #487. Best score 191 bits
Score difference with first non-orthologous sequence - E.histolytica:107 P.ramorum:191

C4M592              	100.00%		H3G8C1              	100.00%
C4LTJ8              	23.37%		
Bootstrap support for C4M592 as seed ortholog is 99%.
Bootstrap support for H3G8C1 as seed ortholog is 100%.

Group of orthologs #488. Best score 191 bits
Score difference with first non-orthologous sequence - E.histolytica:191 P.ramorum:191

C4M844              	100.00%		H3GAP0              	100.00%
B1N4H2              	47.48%		
Bootstrap support for C4M844 as seed ortholog is 100%.
Bootstrap support for H3GAP0 as seed ortholog is 100%.

Group of orthologs #489. Best score 191 bits
Score difference with first non-orthologous sequence - E.histolytica:149 P.ramorum:90

B1N3S2              	100.00%		H3G4X9              	100.00%
Bootstrap support for B1N3S2 as seed ortholog is 100%.
Bootstrap support for H3G4X9 as seed ortholog is 99%.

Group of orthologs #490. Best score 190 bits
Score difference with first non-orthologous sequence - E.histolytica:190 P.ramorum:39

C4M7R2              	100.00%		H3HEH4              	100.00%
C4LV74              	8.26%		
Bootstrap support for C4M7R2 as seed ortholog is 100%.
Bootstrap support for H3HEH4 as seed ortholog is 89%.

Group of orthologs #491. Best score 190 bits
Score difference with first non-orthologous sequence - E.histolytica:190 P.ramorum:75

C4LSF7              	100.00%		H3GYT1              	100.00%
Bootstrap support for C4LSF7 as seed ortholog is 100%.
Bootstrap support for H3GYT1 as seed ortholog is 97%.

Group of orthologs #492. Best score 189 bits
Score difference with first non-orthologous sequence - E.histolytica:189 P.ramorum:189

C4M693              	100.00%		H3GAQ7              	100.00%
Bootstrap support for C4M693 as seed ortholog is 100%.
Bootstrap support for H3GAQ7 as seed ortholog is 100%.

Group of orthologs #493. Best score 189 bits
Score difference with first non-orthologous sequence - E.histolytica:51 P.ramorum:23

C4LX41              	100.00%		H3GMW6              	100.00%
Bootstrap support for C4LX41 as seed ortholog is 87%.
Bootstrap support for H3GMW6 as seed ortholog is 72%.
Alternative seed ortholog is H3G6K2 (23 bits away from this cluster)

Group of orthologs #494. Best score 188 bits
Score difference with first non-orthologous sequence - E.histolytica:122 P.ramorum:188

C4LYV2              	100.00%		H3GL87              	100.00%
C4M751              	100.00%		
C4MA09              	100.00%		
C4M938              	96.63%		
Bootstrap support for C4LYV2 as seed ortholog is 100%.
Bootstrap support for C4M751 as seed ortholog is 100%.
Bootstrap support for C4MA09 as seed ortholog is 100%.
Bootstrap support for H3GL87 as seed ortholog is 100%.

Group of orthologs #495. Best score 188 bits
Score difference with first non-orthologous sequence - E.histolytica:83 P.ramorum:188

C4M373              	100.00%		H3GJS7              	100.00%
C4LVJ0              	13.71%		
C4MAP0              	12.61%		
C4LSW2              	12.48%		
Bootstrap support for C4M373 as seed ortholog is 96%.
Bootstrap support for H3GJS7 as seed ortholog is 100%.

Group of orthologs #496. Best score 188 bits
Score difference with first non-orthologous sequence - E.histolytica:188 P.ramorum:188

C4M7K7              	100.00%		H3HD85              	100.00%
C4LTG7              	15.86%		
C4M257              	12.25%		
Bootstrap support for C4M7K7 as seed ortholog is 100%.
Bootstrap support for H3HD85 as seed ortholog is 100%.

Group of orthologs #497. Best score 188 bits
Score difference with first non-orthologous sequence - E.histolytica:188 P.ramorum:81

C4M870              	100.00%		H3GT84              	100.00%
                    	       		H3GAA4              	11.84%
Bootstrap support for C4M870 as seed ortholog is 100%.
Bootstrap support for H3GT84 as seed ortholog is 99%.

Group of orthologs #498. Best score 188 bits
Score difference with first non-orthologous sequence - E.histolytica:188 P.ramorum:188

C4M1Q8              	100.00%		H3G7V7              	100.00%
Bootstrap support for C4M1Q8 as seed ortholog is 100%.
Bootstrap support for H3G7V7 as seed ortholog is 100%.

Group of orthologs #499. Best score 187 bits
Score difference with first non-orthologous sequence - E.histolytica:107 P.ramorum:187

C4LWU1              	100.00%		H3GCD0              	100.00%
C4M743              	42.39%		
C4LZR0              	40.33%		
B1N3N9              	25.93%		
Bootstrap support for C4LWU1 as seed ortholog is 99%.
Bootstrap support for H3GCD0 as seed ortholog is 100%.

Group of orthologs #500. Best score 187 bits
Score difference with first non-orthologous sequence - E.histolytica:187 P.ramorum:187

C4M7G5              	100.00%		H3GWA8              	100.00%
Bootstrap support for C4M7G5 as seed ortholog is 100%.
Bootstrap support for H3GWA8 as seed ortholog is 100%.

Group of orthologs #501. Best score 186 bits
Score difference with first non-orthologous sequence - E.histolytica:186 P.ramorum:186

C4M7A3              	100.00%		H3G819              	100.00%
                    	       		H3G820              	80.38%
Bootstrap support for C4M7A3 as seed ortholog is 100%.
Bootstrap support for H3G819 as seed ortholog is 100%.

Group of orthologs #502. Best score 186 bits
Score difference with first non-orthologous sequence - E.histolytica:186 P.ramorum:186

C4M012              	100.00%		H3GMB5              	100.00%
B1N4T3              	46.13%		
Bootstrap support for C4M012 as seed ortholog is 100%.
Bootstrap support for H3GMB5 as seed ortholog is 100%.

Group of orthologs #503. Best score 186 bits
Score difference with first non-orthologous sequence - E.histolytica:11 P.ramorum:82

B1N354              	100.00%		H3GA69              	100.00%
Bootstrap support for B1N354 as seed ortholog is 55%.
Alternative seed ortholog is C4M8B0 (11 bits away from this cluster)
Bootstrap support for H3GA69 as seed ortholog is 99%.

Group of orthologs #504. Best score 186 bits
Score difference with first non-orthologous sequence - E.histolytica:186 P.ramorum:186

C4M5B7              	100.00%		H3GU44              	100.00%
Bootstrap support for C4M5B7 as seed ortholog is 100%.
Bootstrap support for H3GU44 as seed ortholog is 100%.

Group of orthologs #505. Best score 185 bits
Score difference with first non-orthologous sequence - E.histolytica:22 P.ramorum:14

C4M307              	100.00%		H3G5K9              	100.00%
Q01958              	77.09%		
Q8I8E0              	64.67%		
B1N5G3              	64.67%		
Q95030              	27.84%		
C4LSI6              	25.70%		
C4LTT0              	23.34%		
Q8I8D9              	15.42%		
Bootstrap support for C4M307 as seed ortholog is 24%.
Alternative seed ortholog is C4M1N5 (22 bits away from this cluster)
Bootstrap support for H3G5K9 as seed ortholog is 62%.
Alternative seed ortholog is H3G6K2 (14 bits away from this cluster)

Group of orthologs #506. Best score 185 bits
Score difference with first non-orthologous sequence - E.histolytica:185 P.ramorum:185

B1N5A1              	100.00%		H3G8T4              	100.00%
C4M4L2              	100.00%		
Bootstrap support for B1N5A1 as seed ortholog is 100%.
Bootstrap support for C4M4L2 as seed ortholog is 100%.
Bootstrap support for H3G8T4 as seed ortholog is 100%.

Group of orthologs #507. Best score 185 bits
Score difference with first non-orthologous sequence - E.histolytica:104 P.ramorum:133

C4LTX1              	100.00%		H3GL68              	100.00%
                    	       		H3G782              	19.41%
Bootstrap support for C4LTX1 as seed ortholog is 99%.
Bootstrap support for H3GL68 as seed ortholog is 99%.

Group of orthologs #508. Best score 185 bits
Score difference with first non-orthologous sequence - E.histolytica:82 P.ramorum:111

C4M6M3              	100.00%		H3G5G1              	100.00%
Bootstrap support for C4M6M3 as seed ortholog is 99%.
Bootstrap support for H3G5G1 as seed ortholog is 100%.

Group of orthologs #509. Best score 185 bits
Score difference with first non-orthologous sequence - E.histolytica:185 P.ramorum:185

C4LUM5              	100.00%		H3GHG9              	100.00%
Bootstrap support for C4LUM5 as seed ortholog is 100%.
Bootstrap support for H3GHG9 as seed ortholog is 100%.

Group of orthologs #510. Best score 185 bits
Score difference with first non-orthologous sequence - E.histolytica:185 P.ramorum:185

C4LSX4              	100.00%		H3GNU1              	100.00%
Bootstrap support for C4LSX4 as seed ortholog is 100%.
Bootstrap support for H3GNU1 as seed ortholog is 100%.

Group of orthologs #511. Best score 185 bits
Score difference with first non-orthologous sequence - E.histolytica:185 P.ramorum:185

C4M599              	100.00%		H3GTI2              	100.00%
Bootstrap support for C4M599 as seed ortholog is 100%.
Bootstrap support for H3GTI2 as seed ortholog is 100%.

Group of orthologs #512. Best score 185 bits
Score difference with first non-orthologous sequence - E.histolytica:185 P.ramorum:185

C4M6E4              	100.00%		H3HDF6              	100.00%
Bootstrap support for C4M6E4 as seed ortholog is 100%.
Bootstrap support for H3HDF6 as seed ortholog is 100%.

Group of orthologs #513. Best score 183 bits
Score difference with first non-orthologous sequence - E.histolytica:183 P.ramorum:183

C4LSE0              	100.00%		H3GU32              	100.00%
C4LX62              	7.55%		
C4MA14              	7.47%		
C4M2Q4              	6.89%		
Bootstrap support for C4LSE0 as seed ortholog is 100%.
Bootstrap support for H3GU32 as seed ortholog is 100%.

Group of orthologs #514. Best score 183 bits
Score difference with first non-orthologous sequence - E.histolytica:78 P.ramorum:183

C4LVB7              	100.00%		H3HCX5              	100.00%
C4MA41              	18.83%		
B1N2F2              	16.11%		
B1N381              	6.49%		
Bootstrap support for C4LVB7 as seed ortholog is 97%.
Bootstrap support for H3HCX5 as seed ortholog is 100%.

Group of orthologs #515. Best score 183 bits
Score difference with first non-orthologous sequence - E.histolytica:183 P.ramorum:183

C4M183              	100.00%		H3GT71              	100.00%
C4LXM2              	8.61%		
Bootstrap support for C4M183 as seed ortholog is 100%.
Bootstrap support for H3GT71 as seed ortholog is 100%.

Group of orthologs #516. Best score 183 bits
Score difference with first non-orthologous sequence - E.histolytica:183 P.ramorum:70

C4LWW8              	100.00%		H3HDW5              	100.00%
                    	       		H3G8N3              	28.78%
Bootstrap support for C4LWW8 as seed ortholog is 100%.
Bootstrap support for H3HDW5 as seed ortholog is 95%.

Group of orthologs #517. Best score 183 bits
Score difference with first non-orthologous sequence - E.histolytica:183 P.ramorum:62

A7UFC2              	100.00%		H3G670              	100.00%
Bootstrap support for A7UFC2 as seed ortholog is 100%.
Bootstrap support for H3G670 as seed ortholog is 99%.

Group of orthologs #518. Best score 183 bits
Score difference with first non-orthologous sequence - E.histolytica:183 P.ramorum:111

C4LWV1              	100.00%		H3G8K7              	100.00%
Bootstrap support for C4LWV1 as seed ortholog is 100%.
Bootstrap support for H3G8K7 as seed ortholog is 99%.

Group of orthologs #519. Best score 183 bits
Score difference with first non-orthologous sequence - E.histolytica:183 P.ramorum:183

C4LT83              	100.00%		H3GTE2              	100.00%
Bootstrap support for C4LT83 as seed ortholog is 100%.
Bootstrap support for H3GTE2 as seed ortholog is 100%.

Group of orthologs #520. Best score 183 bits
Score difference with first non-orthologous sequence - E.histolytica:183 P.ramorum:183

C4LWR5              	100.00%		H3HCF7              	100.00%
Bootstrap support for C4LWR5 as seed ortholog is 100%.
Bootstrap support for H3HCF7 as seed ortholog is 100%.

Group of orthologs #521. Best score 182 bits
Score difference with first non-orthologous sequence - E.histolytica:182 P.ramorum:182

C4M8Y7              	100.00%		H3GL43              	100.00%
C4MAX1              	99.72%		
Bootstrap support for C4M8Y7 as seed ortholog is 100%.
Bootstrap support for H3GL43 as seed ortholog is 100%.

Group of orthologs #522. Best score 181 bits
Score difference with first non-orthologous sequence - E.histolytica:181 P.ramorum:181

C4M5X0              	100.00%		H3H4R1              	100.00%
                    	       		H3G577              	14.68%
Bootstrap support for C4M5X0 as seed ortholog is 100%.
Bootstrap support for H3H4R1 as seed ortholog is 100%.

Group of orthologs #523. Best score 181 bits
Score difference with first non-orthologous sequence - E.histolytica:181 P.ramorum:181

C4LXM0              	100.00%		H3GA40              	100.00%
Bootstrap support for C4LXM0 as seed ortholog is 100%.
Bootstrap support for H3GA40 as seed ortholog is 100%.

Group of orthologs #524. Best score 181 bits
Score difference with first non-orthologous sequence - E.histolytica:181 P.ramorum:181

C4M1E1              	100.00%		H3G9L4              	100.00%
Bootstrap support for C4M1E1 as seed ortholog is 100%.
Bootstrap support for H3G9L4 as seed ortholog is 100%.

Group of orthologs #525. Best score 181 bits
Score difference with first non-orthologous sequence - E.histolytica:181 P.ramorum:181

Q9BI08              	100.00%		H3GA82              	100.00%
Bootstrap support for Q9BI08 as seed ortholog is 100%.
Bootstrap support for H3GA82 as seed ortholog is 100%.

Group of orthologs #526. Best score 181 bits
Score difference with first non-orthologous sequence - E.histolytica:181 P.ramorum:181

C4M3N7              	100.00%		H3HDI3              	100.00%
Bootstrap support for C4M3N7 as seed ortholog is 100%.
Bootstrap support for H3HDI3 as seed ortholog is 100%.

Group of orthologs #527. Best score 180 bits
Score difference with first non-orthologous sequence - E.histolytica:180 P.ramorum:76

C4LXI1              	100.00%		H3H1D6              	100.00%
C4LST4              	26.27%		
C4M904              	16.40%		
C4LUG1              	14.33%		
B1N2N7              	6.21%		
Bootstrap support for C4LXI1 as seed ortholog is 100%.
Bootstrap support for H3H1D6 as seed ortholog is 98%.

Group of orthologs #528. Best score 180 bits
Score difference with first non-orthologous sequence - E.histolytica:180 P.ramorum:180

C4LZL2              	100.00%		H3G8U9              	100.00%
Bootstrap support for C4LZL2 as seed ortholog is 100%.
Bootstrap support for H3G8U9 as seed ortholog is 100%.

Group of orthologs #529. Best score 180 bits
Score difference with first non-orthologous sequence - E.histolytica:180 P.ramorum:180

C4LUA0              	100.00%		H3GPS7              	100.00%
Bootstrap support for C4LUA0 as seed ortholog is 100%.
Bootstrap support for H3GPS7 as seed ortholog is 100%.

Group of orthologs #530. Best score 180 bits
Score difference with first non-orthologous sequence - E.histolytica:180 P.ramorum:180

C4M2V0              	100.00%		H3GHC2              	100.00%
Bootstrap support for C4M2V0 as seed ortholog is 100%.
Bootstrap support for H3GHC2 as seed ortholog is 100%.

Group of orthologs #531. Best score 180 bits
Score difference with first non-orthologous sequence - E.histolytica:180 P.ramorum:132

C4LSG4              	100.00%		H3GXX3              	100.00%
Bootstrap support for C4LSG4 as seed ortholog is 100%.
Bootstrap support for H3GXX3 as seed ortholog is 99%.

Group of orthologs #532. Best score 179 bits
Score difference with first non-orthologous sequence - E.histolytica:179 P.ramorum:179

C4MBM5              	100.00%		H3GG27              	100.00%
Bootstrap support for C4MBM5 as seed ortholog is 100%.
Bootstrap support for H3GG27 as seed ortholog is 100%.

Group of orthologs #533. Best score 179 bits
Score difference with first non-orthologous sequence - E.histolytica:179 P.ramorum:179

C4LVC4              	100.00%		H3H5A8              	100.00%
Bootstrap support for C4LVC4 as seed ortholog is 100%.
Bootstrap support for H3H5A8 as seed ortholog is 100%.

Group of orthologs #534. Best score 178 bits
Score difference with first non-orthologous sequence - E.histolytica:178 P.ramorum:178

C4LUW3              	100.00%		H3G8V6              	100.00%
O15612              	100.00%		
Bootstrap support for C4LUW3 as seed ortholog is 100%.
Bootstrap support for O15612 as seed ortholog is 100%.
Bootstrap support for H3G8V6 as seed ortholog is 100%.

Group of orthologs #535. Best score 178 bits
Score difference with first non-orthologous sequence - E.histolytica:178 P.ramorum:69

C4LTQ4              	100.00%		H3GWA9              	100.00%
C4LZJ2              	22.97%		
Bootstrap support for C4LTQ4 as seed ortholog is 100%.
Bootstrap support for H3GWA9 as seed ortholog is 98%.

Group of orthologs #536. Best score 178 bits
Score difference with first non-orthologous sequence - E.histolytica:178 P.ramorum:178

C4LZ70              	100.00%		H3G6P0              	100.00%
Bootstrap support for C4LZ70 as seed ortholog is 100%.
Bootstrap support for H3G6P0 as seed ortholog is 100%.

Group of orthologs #537. Best score 178 bits
Score difference with first non-orthologous sequence - E.histolytica:178 P.ramorum:178

C4LXC1              	100.00%		H3GKJ4              	100.00%
Bootstrap support for C4LXC1 as seed ortholog is 100%.
Bootstrap support for H3GKJ4 as seed ortholog is 100%.

Group of orthologs #538. Best score 177 bits
Score difference with first non-orthologous sequence - E.histolytica:177 P.ramorum:91

C4M7W2              	100.00%		H3G9U6              	61.27%
C4M8C2              	100.00%		H3G9U3              	100.00%
B1N503              	45.33%		H3GAS3              	43.50%
B1N5J0              	32.44%		H3GME0              	42.97%
C4LUT1              	16.22%		H3G908              	41.91%
Bootstrap support for C4M7W2 as seed ortholog is 100%.
Bootstrap support for C4M8C2 as seed ortholog is 100%.
Bootstrap support for H3G9U3 as seed ortholog is 99%.

Group of orthologs #539. Best score 177 bits
Score difference with first non-orthologous sequence - E.histolytica:177 P.ramorum:77

C4M5I8              	100.00%		H3H461              	100.00%
Bootstrap support for C4M5I8 as seed ortholog is 100%.
Bootstrap support for H3H461 as seed ortholog is 98%.

Group of orthologs #540. Best score 176 bits
Score difference with first non-orthologous sequence - E.histolytica:176 P.ramorum:53

B1N428              	100.00%		H3G5T5              	100.00%
B1N3C4              	51.54%		H3H4B9              	41.47%
                    	       		H3G6B7              	25.20%
                    	       		H3G6P5              	20.47%
                    	       		H3G6P4              	17.85%
                    	       		H3G9H7              	12.60%
Bootstrap support for B1N428 as seed ortholog is 100%.
Bootstrap support for H3G5T5 as seed ortholog is 98%.

Group of orthologs #541. Best score 176 bits
Score difference with first non-orthologous sequence - E.histolytica:176 P.ramorum:176

C4M8P7              	100.00%		H3HBE1              	100.00%
C4LZ68              	63.42%		
C4M9M8              	12.32%		
C4M2I5              	5.88%		
Bootstrap support for C4M8P7 as seed ortholog is 100%.
Bootstrap support for H3HBE1 as seed ortholog is 100%.

Group of orthologs #542. Best score 176 bits
Score difference with first non-orthologous sequence - E.histolytica:61 P.ramorum:176

C4LW71              	100.00%		H3G7I0              	100.00%
Bootstrap support for C4LW71 as seed ortholog is 100%.
Bootstrap support for H3G7I0 as seed ortholog is 100%.

Group of orthologs #543. Best score 176 bits
Score difference with first non-orthologous sequence - E.histolytica:123 P.ramorum:104

C4LYY7              	100.00%		H3GU14              	100.00%
Bootstrap support for C4LYY7 as seed ortholog is 99%.
Bootstrap support for H3GU14 as seed ortholog is 99%.

Group of orthologs #544. Best score 175 bits
Score difference with first non-orthologous sequence - E.histolytica:175 P.ramorum:175

C4M4G1              	100.00%		H3HC72              	100.00%
                    	       		H3GAT1              	7.96%
Bootstrap support for C4M4G1 as seed ortholog is 100%.
Bootstrap support for H3HC72 as seed ortholog is 100%.

Group of orthologs #545. Best score 175 bits
Score difference with first non-orthologous sequence - E.histolytica:175 P.ramorum:175

C4LYH9              	100.00%		H3GTZ6              	100.00%
Bootstrap support for C4LYH9 as seed ortholog is 100%.
Bootstrap support for H3GTZ6 as seed ortholog is 100%.

Group of orthologs #546. Best score 175 bits
Score difference with first non-orthologous sequence - E.histolytica:175 P.ramorum:175

C4M291              	100.00%		H3GYD8              	100.00%
Bootstrap support for C4M291 as seed ortholog is 100%.
Bootstrap support for H3GYD8 as seed ortholog is 100%.

Group of orthologs #547. Best score 174 bits
Score difference with first non-orthologous sequence - E.histolytica:174 P.ramorum:174

C4LVX7              	100.00%		H3G5W3              	100.00%
Bootstrap support for C4LVX7 as seed ortholog is 100%.
Bootstrap support for H3G5W3 as seed ortholog is 100%.

Group of orthologs #548. Best score 174 bits
Score difference with first non-orthologous sequence - E.histolytica:174 P.ramorum:174

C4M2B8              	100.00%		H3G7U0              	100.00%
Bootstrap support for C4M2B8 as seed ortholog is 100%.
Bootstrap support for H3G7U0 as seed ortholog is 100%.

Group of orthologs #549. Best score 174 bits
Score difference with first non-orthologous sequence - E.histolytica:174 P.ramorum:174

C4M1J2              	100.00%		H3GAS9              	100.00%
Bootstrap support for C4M1J2 as seed ortholog is 100%.
Bootstrap support for H3GAS9 as seed ortholog is 100%.

Group of orthologs #550. Best score 173 bits
Score difference with first non-orthologous sequence - E.histolytica:123 P.ramorum:104

C4M3M3              	100.00%		H3G8Q0              	100.00%
Bootstrap support for C4M3M3 as seed ortholog is 99%.
Bootstrap support for H3G8Q0 as seed ortholog is 99%.

Group of orthologs #551. Best score 173 bits
Score difference with first non-orthologous sequence - E.histolytica:173 P.ramorum:173

Q6S4W2              	100.00%		H3GE58              	100.00%
Bootstrap support for Q6S4W2 as seed ortholog is 100%.
Bootstrap support for H3GE58 as seed ortholog is 100%.

Group of orthologs #552. Best score 172 bits
Score difference with first non-orthologous sequence - E.histolytica:172 P.ramorum:172

C4LYU3              	100.00%		H3H7P1              	100.00%
C4M964              	25.58%		
C4M5D7              	23.80%		
Bootstrap support for C4LYU3 as seed ortholog is 100%.
Bootstrap support for H3H7P1 as seed ortholog is 100%.

Group of orthologs #553. Best score 171 bits
Score difference with first non-orthologous sequence - E.histolytica:171 P.ramorum:171

C4LVZ9              	100.00%		H3HCD6              	100.00%
C4M9B0              	98.21%		
Bootstrap support for C4LVZ9 as seed ortholog is 100%.
Bootstrap support for H3HCD6 as seed ortholog is 100%.

Group of orthologs #554. Best score 171 bits
Score difference with first non-orthologous sequence - E.histolytica:171 P.ramorum:171

C4M0X4              	100.00%		H3GLP4              	100.00%
Bootstrap support for C4M0X4 as seed ortholog is 100%.
Bootstrap support for H3GLP4 as seed ortholog is 100%.

Group of orthologs #555. Best score 171 bits
Score difference with first non-orthologous sequence - E.histolytica:171 P.ramorum:171

C4M5L0              	100.00%		H3GU36              	100.00%
Bootstrap support for C4M5L0 as seed ortholog is 100%.
Bootstrap support for H3GU36 as seed ortholog is 100%.

Group of orthologs #556. Best score 171 bits
Score difference with first non-orthologous sequence - E.histolytica:171 P.ramorum:171

C4M6B9              	100.00%		H3GWM1              	100.00%
Bootstrap support for C4M6B9 as seed ortholog is 100%.
Bootstrap support for H3GWM1 as seed ortholog is 100%.

Group of orthologs #557. Best score 171 bits
Score difference with first non-orthologous sequence - E.histolytica:171 P.ramorum:171

C4LTL2              	100.00%		H3HDQ1              	100.00%
Bootstrap support for C4LTL2 as seed ortholog is 100%.
Bootstrap support for H3HDQ1 as seed ortholog is 100%.

Group of orthologs #558. Best score 170 bits
Score difference with first non-orthologous sequence - E.histolytica:170 P.ramorum:170

C4M979              	100.00%		H3GAD4              	100.00%
C4LW92              	96.15%		H3GAY1              	100.00%
Bootstrap support for C4M979 as seed ortholog is 100%.
Bootstrap support for H3GAD4 as seed ortholog is 100%.
Bootstrap support for H3GAY1 as seed ortholog is 100%.

Group of orthologs #559. Best score 170 bits
Score difference with first non-orthologous sequence - E.histolytica:170 P.ramorum:170

C4M294              	100.00%		H3H6K8              	100.00%
C4M433              	49.34%		
Bootstrap support for C4M294 as seed ortholog is 100%.
Bootstrap support for H3H6K8 as seed ortholog is 100%.

Group of orthologs #560. Best score 170 bits
Score difference with first non-orthologous sequence - E.histolytica:170 P.ramorum:170

C4M0I9              	100.00%		H3G8A4              	100.00%
Bootstrap support for C4M0I9 as seed ortholog is 100%.
Bootstrap support for H3G8A4 as seed ortholog is 100%.

Group of orthologs #561. Best score 170 bits
Score difference with first non-orthologous sequence - E.histolytica:45 P.ramorum:170

C4M1F2              	100.00%		H3G9J2              	100.00%
Bootstrap support for C4M1F2 as seed ortholog is 94%.
Bootstrap support for H3G9J2 as seed ortholog is 100%.

Group of orthologs #562. Best score 170 bits
Score difference with first non-orthologous sequence - E.histolytica:170 P.ramorum:170

Q5U8N0              	100.00%		H3G9M5              	100.00%
Bootstrap support for Q5U8N0 as seed ortholog is 100%.
Bootstrap support for H3G9M5 as seed ortholog is 100%.

Group of orthologs #563. Best score 170 bits
Score difference with first non-orthologous sequence - E.histolytica:170 P.ramorum:170

C4M982              	100.00%		H3GPI8              	100.00%
Bootstrap support for C4M982 as seed ortholog is 100%.
Bootstrap support for H3GPI8 as seed ortholog is 100%.

Group of orthologs #564. Best score 169 bits
Score difference with first non-orthologous sequence - E.histolytica:93 P.ramorum:169

C4M0A1              	100.00%		H3G7A8              	100.00%
C4LVP0              	11.92%		
Bootstrap support for C4M0A1 as seed ortholog is 100%.
Bootstrap support for H3G7A8 as seed ortholog is 100%.

Group of orthologs #565. Best score 169 bits
Score difference with first non-orthologous sequence - E.histolytica:116 P.ramorum:122

Q1EQ52              	100.00%		H3GAW1              	100.00%
                    	       		H3GJ37              	30.08%
Bootstrap support for Q1EQ52 as seed ortholog is 99%.
Bootstrap support for H3GAW1 as seed ortholog is 99%.

Group of orthologs #566. Best score 169 bits
Score difference with first non-orthologous sequence - E.histolytica:48 P.ramorum:169

C4LSS2              	100.00%		H3HEG2              	100.00%
C4M993              	100.00%		
Bootstrap support for C4LSS2 as seed ortholog is 93%.
Bootstrap support for C4M993 as seed ortholog is 96%.
Bootstrap support for H3HEG2 as seed ortholog is 100%.

Group of orthologs #567. Best score 169 bits
Score difference with first non-orthologous sequence - E.histolytica:41 P.ramorum:2

C4MBA7              	100.00%		H3G721              	100.00%
Bootstrap support for C4MBA7 as seed ortholog is 90%.
Bootstrap support for H3G721 as seed ortholog is 53%.
Alternative seed ortholog is H3GBB6 (2 bits away from this cluster)

Group of orthologs #568. Best score 169 bits
Score difference with first non-orthologous sequence - E.histolytica:169 P.ramorum:169

C4M7A4              	100.00%		H3GRQ0              	100.00%
Bootstrap support for C4M7A4 as seed ortholog is 100%.
Bootstrap support for H3GRQ0 as seed ortholog is 100%.

Group of orthologs #569. Best score 168 bits
Score difference with first non-orthologous sequence - E.histolytica:168 P.ramorum:168

C4M7A5              	100.00%		H3G940              	100.00%
C4M0C6              	87.80%		
C4M7H3              	86.99%		
Bootstrap support for C4M7A5 as seed ortholog is 100%.
Bootstrap support for H3G940 as seed ortholog is 100%.

Group of orthologs #570. Best score 168 bits
Score difference with first non-orthologous sequence - E.histolytica:168 P.ramorum:168

C4M343              	100.00%		H3G953              	100.00%
                    	       		H3G954              	100.00%
Bootstrap support for C4M343 as seed ortholog is 100%.
Bootstrap support for H3G953 as seed ortholog is 100%.
Bootstrap support for H3G954 as seed ortholog is 100%.

Group of orthologs #571. Best score 168 bits
Score difference with first non-orthologous sequence - E.histolytica:54 P.ramorum:85

O96908              	100.00%		H3GA88              	100.00%
C4LT93              	29.49%		
Bootstrap support for O96908 as seed ortholog is 98%.
Bootstrap support for H3GA88 as seed ortholog is 99%.

Group of orthologs #572. Best score 167 bits
Score difference with first non-orthologous sequence - E.histolytica:38 P.ramorum:167

C4M690              	100.00%		H3GAJ2              	100.00%
Bootstrap support for C4M690 as seed ortholog is 82%.
Bootstrap support for H3GAJ2 as seed ortholog is 100%.

Group of orthologs #573. Best score 166 bits
Score difference with first non-orthologous sequence - E.histolytica:166 P.ramorum:26

C4LYC7              	100.00%		H3H7Z9              	100.00%
                    	       		H3G931              	71.27%
                    	       		H3H827              	60.76%
                    	       		H3GQK2              	60.62%
                    	       		H3GNT6              	60.47%
                    	       		H3H822              	54.74%
                    	       		H3GNN8              	53.42%
                    	       		H3GNN7              	52.76%
                    	       		H3GNN6              	50.04%
                    	       		H3GZG0              	49.08%
                    	       		H3GNN5              	48.93%
                    	       		H3H565              	45.26%
                    	       		H3GMS5              	42.03%
                    	       		H3H963              	38.43%
                    	       		H3GJ22              	29.61%
                    	       		H3H2D6              	25.94%
Bootstrap support for C4LYC7 as seed ortholog is 100%.
Bootstrap support for H3H7Z9 as seed ortholog is 72%.
Alternative seed ortholog is H3H6X6 (26 bits away from this cluster)

Group of orthologs #574. Best score 166 bits
Score difference with first non-orthologous sequence - E.histolytica:92 P.ramorum:166

C4LWH7              	100.00%		H3G880              	100.00%
C4LY78              	92.37%		H3G9N3              	87.88%
Bootstrap support for C4LWH7 as seed ortholog is 99%.
Bootstrap support for H3G880 as seed ortholog is 100%.

Group of orthologs #575. Best score 166 bits
Score difference with first non-orthologous sequence - E.histolytica:67 P.ramorum:49

C4M6Z2              	100.00%		H3GE39              	100.00%
Bootstrap support for C4M6Z2 as seed ortholog is 94%.
Bootstrap support for H3GE39 as seed ortholog is 89%.

Group of orthologs #576. Best score 165 bits
Score difference with first non-orthologous sequence - E.histolytica:165 P.ramorum:165

C4M8M3              	100.00%		H3G8D4              	100.00%
C4M3F3              	93.83%		
B1N444              	55.97%		
Bootstrap support for C4M8M3 as seed ortholog is 100%.
Bootstrap support for H3G8D4 as seed ortholog is 100%.

Group of orthologs #577. Best score 165 bits
Score difference with first non-orthologous sequence - E.histolytica:88 P.ramorum:165

C4MA64              	100.00%		H3H3U8              	100.00%
C4LU69              	14.36%		H3GTY4              	28.94%
Bootstrap support for C4MA64 as seed ortholog is 88%.
Bootstrap support for H3H3U8 as seed ortholog is 100%.

Group of orthologs #578. Best score 165 bits
Score difference with first non-orthologous sequence - E.histolytica:165 P.ramorum:27

C4LSS1              	100.00%		H3H2R3              	100.00%
C4LT28              	17.63%		
Bootstrap support for C4LSS1 as seed ortholog is 100%.
Bootstrap support for H3H2R3 as seed ortholog is 74%.
Alternative seed ortholog is H3GZC5 (27 bits away from this cluster)

Group of orthologs #579. Best score 165 bits
Score difference with first non-orthologous sequence - E.histolytica:165 P.ramorum:165

C4LXR8              	100.00%		H3GZV8              	100.00%
Bootstrap support for C4LXR8 as seed ortholog is 100%.
Bootstrap support for H3GZV8 as seed ortholog is 100%.

Group of orthologs #580. Best score 165 bits
Score difference with first non-orthologous sequence - E.histolytica:165 P.ramorum:165

Q76L90              	100.00%		H3GQ87              	100.00%
Bootstrap support for Q76L90 as seed ortholog is 100%.
Bootstrap support for H3GQ87 as seed ortholog is 100%.

Group of orthologs #581. Best score 165 bits
Score difference with first non-orthologous sequence - E.histolytica:77 P.ramorum:52

C4LXU2              	100.00%		H3H8J2              	100.00%
Bootstrap support for C4LXU2 as seed ortholog is 97%.
Bootstrap support for H3H8J2 as seed ortholog is 89%.

Group of orthologs #582. Best score 165 bits
Score difference with first non-orthologous sequence - E.histolytica:165 P.ramorum:165

C4M3H2              	100.00%		H3HD31              	100.00%
Bootstrap support for C4M3H2 as seed ortholog is 100%.
Bootstrap support for H3HD31 as seed ortholog is 100%.

Group of orthologs #583. Best score 164 bits
Score difference with first non-orthologous sequence - E.histolytica:164 P.ramorum:164

C4LVY6              	100.00%		H3G8K0              	100.00%
Bootstrap support for C4LVY6 as seed ortholog is 100%.
Bootstrap support for H3G8K0 as seed ortholog is 100%.

Group of orthologs #584. Best score 164 bits
Score difference with first non-orthologous sequence - E.histolytica:164 P.ramorum:164

C4LXB3              	100.00%		H3GIY2              	100.00%
Bootstrap support for C4LXB3 as seed ortholog is 100%.
Bootstrap support for H3GIY2 as seed ortholog is 100%.

Group of orthologs #585. Best score 164 bits
Score difference with first non-orthologous sequence - E.histolytica:38 P.ramorum:45

Q9BLF0              	100.00%		H3G6L4              	100.00%
Bootstrap support for Q9BLF0 as seed ortholog is 96%.
Bootstrap support for H3G6L4 as seed ortholog is 97%.

Group of orthologs #586. Best score 163 bits
Score difference with first non-orthologous sequence - E.histolytica:163 P.ramorum:86

C4LYY8              	100.00%		H3G855              	100.00%
Bootstrap support for C4LYY8 as seed ortholog is 100%.
Bootstrap support for H3G855 as seed ortholog is 98%.

Group of orthologs #587. Best score 163 bits
Score difference with first non-orthologous sequence - E.histolytica:39 P.ramorum:163

Q1EQ12              	100.00%		H3GDE6              	100.00%
Bootstrap support for Q1EQ12 as seed ortholog is 96%.
Bootstrap support for H3GDE6 as seed ortholog is 100%.

Group of orthologs #588. Best score 162 bits
Score difference with first non-orthologous sequence - E.histolytica:81 P.ramorum:96

C4LT70              	100.00%		H3G614              	100.00%
Bootstrap support for C4LT70 as seed ortholog is 99%.
Bootstrap support for H3G614 as seed ortholog is 99%.

Group of orthologs #589. Best score 162 bits
Score difference with first non-orthologous sequence - E.histolytica:162 P.ramorum:162

C4M0T8              	100.00%		H3HCB3              	100.00%
Bootstrap support for C4M0T8 as seed ortholog is 100%.
Bootstrap support for H3HCB3 as seed ortholog is 100%.

Group of orthologs #590. Best score 161 bits
Score difference with first non-orthologous sequence - E.histolytica:161 P.ramorum:161

C4LVU5              	100.00%		H3GCB7              	100.00%
Bootstrap support for C4LVU5 as seed ortholog is 100%.
Bootstrap support for H3GCB7 as seed ortholog is 100%.

Group of orthologs #591. Best score 161 bits
Score difference with first non-orthologous sequence - E.histolytica:161 P.ramorum:161

C4LW54              	100.00%		H3HDK0              	100.00%
Bootstrap support for C4LW54 as seed ortholog is 100%.
Bootstrap support for H3HDK0 as seed ortholog is 100%.

Group of orthologs #592. Best score 160 bits
Score difference with first non-orthologous sequence - E.histolytica:115 P.ramorum:160

C4LUV0              	100.00%		H3GAL1              	100.00%
B1N303              	92.87%		
Bootstrap support for C4LUV0 as seed ortholog is 99%.
Bootstrap support for H3GAL1 as seed ortholog is 100%.

Group of orthologs #593. Best score 160 bits
Score difference with first non-orthologous sequence - E.histolytica:160 P.ramorum:160

C4M445              	100.00%		H3G5K1              	100.00%
Bootstrap support for C4M445 as seed ortholog is 100%.
Bootstrap support for H3G5K1 as seed ortholog is 100%.

Group of orthologs #594. Best score 159 bits
Score difference with first non-orthologous sequence - E.histolytica:159 P.ramorum:159

C4M013              	100.00%		H3G7K1              	100.00%
C4MAJ4              	100.00%		H3GWM2              	55.20%
B1N5B7              	25.68%		
C4M9L8              	24.90%		
C4LWI7              	24.90%		
B1N487              	24.12%		
B1N458              	12.06%		
B1N5J1              	12.06%		
C4MB27              	9.73%		
Bootstrap support for C4M013 as seed ortholog is 100%.
Bootstrap support for C4MAJ4 as seed ortholog is 100%.
Bootstrap support for H3G7K1 as seed ortholog is 100%.

Group of orthologs #595. Best score 159 bits
Score difference with first non-orthologous sequence - E.histolytica:159 P.ramorum:159

C4M6D0              	100.00%		H3GJ62              	100.00%
                    	       		H3GJ63              	86.21%
Bootstrap support for C4M6D0 as seed ortholog is 100%.
Bootstrap support for H3GJ62 as seed ortholog is 100%.

Group of orthologs #596. Best score 159 bits
Score difference with first non-orthologous sequence - E.histolytica:159 P.ramorum:159

C4M8A4              	100.00%		H3G7M3              	100.00%
Bootstrap support for C4M8A4 as seed ortholog is 100%.
Bootstrap support for H3G7M3 as seed ortholog is 100%.

Group of orthologs #597. Best score 159 bits
Score difference with first non-orthologous sequence - E.histolytica:159 P.ramorum:159

C4M5M9              	100.00%		H3GBR9              	100.00%
Bootstrap support for C4M5M9 as seed ortholog is 100%.
Bootstrap support for H3GBR9 as seed ortholog is 100%.

Group of orthologs #598. Best score 158 bits
Score difference with first non-orthologous sequence - E.histolytica:158 P.ramorum:158

Q51D88              	100.00%		H3GHC6              	100.00%
                    	       		H3GY47              	11.49%
                    	       		H3GWB8              	8.41%
Bootstrap support for Q51D88 as seed ortholog is 100%.
Bootstrap support for H3GHC6 as seed ortholog is 100%.

Group of orthologs #599. Best score 158 bits
Score difference with first non-orthologous sequence - E.histolytica:158 P.ramorum:158

C4LUD5              	100.00%		H3G9F9              	100.00%
Bootstrap support for C4LUD5 as seed ortholog is 100%.
Bootstrap support for H3G9F9 as seed ortholog is 100%.

Group of orthologs #600. Best score 158 bits
Score difference with first non-orthologous sequence - E.histolytica:158 P.ramorum:158

C4M802              	100.00%		H3G9I6              	100.00%
Bootstrap support for C4M802 as seed ortholog is 100%.
Bootstrap support for H3G9I6 as seed ortholog is 100%.

Group of orthologs #601. Best score 158 bits
Score difference with first non-orthologous sequence - E.histolytica:158 P.ramorum:158

C4MAX4              	100.00%		H3G7K5              	100.00%
Bootstrap support for C4MAX4 as seed ortholog is 100%.
Bootstrap support for H3G7K5 as seed ortholog is 100%.

Group of orthologs #602. Best score 158 bits
Score difference with first non-orthologous sequence - E.histolytica:158 P.ramorum:158

C4M9R9              	100.00%		H3G9U4              	100.00%
Bootstrap support for C4M9R9 as seed ortholog is 100%.
Bootstrap support for H3G9U4 as seed ortholog is 100%.

Group of orthologs #603. Best score 158 bits
Score difference with first non-orthologous sequence - E.histolytica:158 P.ramorum:158

C4LZU7              	100.00%		H3GPC6              	100.00%
Bootstrap support for C4LZU7 as seed ortholog is 100%.
Bootstrap support for H3GPC6 as seed ortholog is 100%.

Group of orthologs #604. Best score 157 bits
Score difference with first non-orthologous sequence - E.histolytica:157 P.ramorum:157

C4LT96              	100.00%		H3GAD2              	100.00%
C4LV05              	96.43%		
C4M2W1              	95.54%		
Bootstrap support for C4LT96 as seed ortholog is 100%.
Bootstrap support for H3GAD2 as seed ortholog is 100%.

Group of orthologs #605. Best score 157 bits
Score difference with first non-orthologous sequence - E.histolytica:157 P.ramorum:157

P34107              	100.00%		H3G948              	100.00%
C4LX20              	100.00%		
Bootstrap support for P34107 as seed ortholog is 100%.
Bootstrap support for C4LX20 as seed ortholog is 100%.
Bootstrap support for H3G948 as seed ortholog is 100%.

Group of orthologs #606. Best score 157 bits
Score difference with first non-orthologous sequence - E.histolytica:157 P.ramorum:157

C4LWS1              	100.00%		H3GAU6              	100.00%
C4M6Y2              	48.51%		
Bootstrap support for C4LWS1 as seed ortholog is 100%.
Bootstrap support for H3GAU6 as seed ortholog is 100%.

Group of orthologs #607. Best score 157 bits
Score difference with first non-orthologous sequence - E.histolytica:157 P.ramorum:157

C4LWN1              	100.00%		H3GJT5              	100.00%
C4M4V6              	100.00%		
Bootstrap support for C4LWN1 as seed ortholog is 100%.
Bootstrap support for C4M4V6 as seed ortholog is 100%.
Bootstrap support for H3GJT5 as seed ortholog is 100%.

Group of orthologs #608. Best score 157 bits
Score difference with first non-orthologous sequence - E.histolytica:157 P.ramorum:157

C4LUV8              	100.00%		H3G8D5              	100.00%
Bootstrap support for C4LUV8 as seed ortholog is 100%.
Bootstrap support for H3G8D5 as seed ortholog is 100%.

Group of orthologs #609. Best score 157 bits
Score difference with first non-orthologous sequence - E.histolytica:157 P.ramorum:157

C4LZY8              	100.00%		H3G5K6              	100.00%
Bootstrap support for C4LZY8 as seed ortholog is 100%.
Bootstrap support for H3G5K6 as seed ortholog is 100%.

Group of orthologs #610. Best score 157 bits
Score difference with first non-orthologous sequence - E.histolytica:157 P.ramorum:157

C4M4K5              	100.00%		H3GEA6              	100.00%
Bootstrap support for C4M4K5 as seed ortholog is 100%.
Bootstrap support for H3GEA6 as seed ortholog is 100%.

Group of orthologs #611. Best score 157 bits
Score difference with first non-orthologous sequence - E.histolytica:157 P.ramorum:157

C4LWB5              	100.00%		H3GNQ5              	100.00%
Bootstrap support for C4LWB5 as seed ortholog is 100%.
Bootstrap support for H3GNQ5 as seed ortholog is 100%.

Group of orthologs #612. Best score 157 bits
Score difference with first non-orthologous sequence - E.histolytica:113 P.ramorum:157

C4M5A7              	100.00%		H3GMD2              	100.00%
Bootstrap support for C4M5A7 as seed ortholog is 97%.
Bootstrap support for H3GMD2 as seed ortholog is 100%.

Group of orthologs #613. Best score 156 bits
Score difference with first non-orthologous sequence - E.histolytica:156 P.ramorum:156

C4M3T2              	100.00%		H3G9T8              	100.00%
Bootstrap support for C4M3T2 as seed ortholog is 100%.
Bootstrap support for H3G9T8 as seed ortholog is 100%.

Group of orthologs #614. Best score 155 bits
Score difference with first non-orthologous sequence - E.histolytica:53 P.ramorum:44

C4M0U8              	100.00%		H3G9K1              	100.00%
                    	       		H3G5V3              	5.67%
Bootstrap support for C4M0U8 as seed ortholog is 99%.
Bootstrap support for H3G9K1 as seed ortholog is 98%.

Group of orthologs #615. Best score 155 bits
Score difference with first non-orthologous sequence - E.histolytica:155 P.ramorum:155

C4MAY8              	100.00%		H3GA64              	100.00%
C4LX57              	97.29%		
Bootstrap support for C4MAY8 as seed ortholog is 100%.
Bootstrap support for H3GA64 as seed ortholog is 100%.

Group of orthologs #616. Best score 155 bits
Score difference with first non-orthologous sequence - E.histolytica:47 P.ramorum:155

C4M764              	100.00%		H3GFP5              	100.00%
                    	       		H3G4Y0              	5.41%
Bootstrap support for C4M764 as seed ortholog is 94%.
Bootstrap support for H3GFP5 as seed ortholog is 100%.

Group of orthologs #617. Best score 155 bits
Score difference with first non-orthologous sequence - E.histolytica:155 P.ramorum:155

C4LVH5              	100.00%		H3G8A3              	100.00%
Bootstrap support for C4LVH5 as seed ortholog is 100%.
Bootstrap support for H3G8A3 as seed ortholog is 100%.

Group of orthologs #618. Best score 155 bits
Score difference with first non-orthologous sequence - E.histolytica:155 P.ramorum:155

C4LVB9              	100.00%		H3G8S7              	100.00%
Bootstrap support for C4LVB9 as seed ortholog is 100%.
Bootstrap support for H3G8S7 as seed ortholog is 100%.

Group of orthologs #619. Best score 155 bits
Score difference with first non-orthologous sequence - E.histolytica:155 P.ramorum:155

C4LYF8              	100.00%		H3G6P3              	100.00%
Bootstrap support for C4LYF8 as seed ortholog is 100%.
Bootstrap support for H3G6P3 as seed ortholog is 100%.

Group of orthologs #620. Best score 155 bits
Score difference with first non-orthologous sequence - E.histolytica:155 P.ramorum:155

C4LZM1              	100.00%		H3G7K0              	100.00%
Bootstrap support for C4LZM1 as seed ortholog is 100%.
Bootstrap support for H3G7K0 as seed ortholog is 100%.

Group of orthologs #621. Best score 155 bits
Score difference with first non-orthologous sequence - E.histolytica:155 P.ramorum:155

C4LT01              	100.00%		H3GG34              	100.00%
Bootstrap support for C4LT01 as seed ortholog is 100%.
Bootstrap support for H3GG34 as seed ortholog is 100%.

Group of orthologs #622. Best score 155 bits
Score difference with first non-orthologous sequence - E.histolytica:155 P.ramorum:155

C4LZF8              	100.00%		H3GAQ2              	100.00%
Bootstrap support for C4LZF8 as seed ortholog is 100%.
Bootstrap support for H3GAQ2 as seed ortholog is 100%.

Group of orthologs #623. Best score 155 bits
Score difference with first non-orthologous sequence - E.histolytica:155 P.ramorum:155

C4M6Y9              	100.00%		H3G6Z2              	100.00%
Bootstrap support for C4M6Y9 as seed ortholog is 100%.
Bootstrap support for H3G6Z2 as seed ortholog is 100%.

Group of orthologs #624. Best score 155 bits
Score difference with first non-orthologous sequence - E.histolytica:155 P.ramorum:155

C4LT45              	100.00%		H3GTV1              	100.00%
Bootstrap support for C4LT45 as seed ortholog is 100%.
Bootstrap support for H3GTV1 as seed ortholog is 100%.

Group of orthologs #625. Best score 155 bits
Score difference with first non-orthologous sequence - E.histolytica:155 P.ramorum:155

C4LW59              	100.00%		H3GUB3              	100.00%
Bootstrap support for C4LW59 as seed ortholog is 100%.
Bootstrap support for H3GUB3 as seed ortholog is 100%.

Group of orthologs #626. Best score 154 bits
Score difference with first non-orthologous sequence - E.histolytica:154 P.ramorum:154

C4LTE7              	100.00%		H3GAD1              	100.00%
C4LUA1              	74.17%		
Bootstrap support for C4LTE7 as seed ortholog is 100%.
Bootstrap support for H3GAD1 as seed ortholog is 100%.

Group of orthologs #627. Best score 154 bits
Score difference with first non-orthologous sequence - E.histolytica:154 P.ramorum:154

C4LZ08              	100.00%		H3GGH4              	100.00%
C4M622              	27.16%		
Bootstrap support for C4LZ08 as seed ortholog is 100%.
Bootstrap support for H3GGH4 as seed ortholog is 100%.

Group of orthologs #628. Best score 153 bits
Score difference with first non-orthologous sequence - E.histolytica:21 P.ramorum:153

C4LYL7              	100.00%		H3G8Z1              	100.00%
                    	       		H3G9E6              	32.50%
Bootstrap support for C4LYL7 as seed ortholog is 80%.
Bootstrap support for H3G8Z1 as seed ortholog is 100%.

Group of orthologs #629. Best score 153 bits
Score difference with first non-orthologous sequence - E.histolytica:153 P.ramorum:153

C4M2U6              	100.00%		H3G6E8              	100.00%
Bootstrap support for C4M2U6 as seed ortholog is 100%.
Bootstrap support for H3G6E8 as seed ortholog is 100%.

Group of orthologs #630. Best score 153 bits
Score difference with first non-orthologous sequence - E.histolytica:153 P.ramorum:153

C4M2T2              	100.00%		H3GUW8              	100.00%
Bootstrap support for C4M2T2 as seed ortholog is 100%.
Bootstrap support for H3GUW8 as seed ortholog is 100%.

Group of orthologs #631. Best score 153 bits
Score difference with first non-orthologous sequence - E.histolytica:153 P.ramorum:153

C4LUN0              	100.00%		H3HCP8              	100.00%
Bootstrap support for C4LUN0 as seed ortholog is 100%.
Bootstrap support for H3HCP8 as seed ortholog is 100%.

Group of orthologs #632. Best score 152 bits
Score difference with first non-orthologous sequence - E.histolytica:152 P.ramorum:152

B1N507              	100.00%		H3G971              	100.00%
Bootstrap support for B1N507 as seed ortholog is 100%.
Bootstrap support for H3G971 as seed ortholog is 100%.

Group of orthologs #633. Best score 152 bits
Score difference with first non-orthologous sequence - E.histolytica:152 P.ramorum:152

C4LUZ3              	100.00%		H3GCM4              	100.00%
Bootstrap support for C4LUZ3 as seed ortholog is 100%.
Bootstrap support for H3GCM4 as seed ortholog is 100%.

Group of orthologs #634. Best score 152 bits
Score difference with first non-orthologous sequence - E.histolytica:152 P.ramorum:152

C4LUM9              	100.00%		H3GF34              	100.00%
Bootstrap support for C4LUM9 as seed ortholog is 100%.
Bootstrap support for H3GF34 as seed ortholog is 100%.

Group of orthologs #635. Best score 152 bits
Score difference with first non-orthologous sequence - E.histolytica:152 P.ramorum:152

C4LY24              	100.00%		H3GMW9              	100.00%
Bootstrap support for C4LY24 as seed ortholog is 100%.
Bootstrap support for H3GMW9 as seed ortholog is 100%.

Group of orthologs #636. Best score 151 bits
Score difference with first non-orthologous sequence - E.histolytica:35 P.ramorum:151

B1N5S3              	100.00%		H3G9V9              	100.00%
Bootstrap support for B1N5S3 as seed ortholog is 98%.
Bootstrap support for H3G9V9 as seed ortholog is 100%.

Group of orthologs #637. Best score 151 bits
Score difference with first non-orthologous sequence - E.histolytica:151 P.ramorum:151

C4LUN4              	100.00%		H3G9Z5              	100.00%
Bootstrap support for C4LUN4 as seed ortholog is 100%.
Bootstrap support for H3G9Z5 as seed ortholog is 100%.

Group of orthologs #638. Best score 151 bits
Score difference with first non-orthologous sequence - E.histolytica:151 P.ramorum:151

C4LZA0              	100.00%		H3G9C3              	100.00%
Bootstrap support for C4LZA0 as seed ortholog is 100%.
Bootstrap support for H3G9C3 as seed ortholog is 100%.

Group of orthologs #639. Best score 151 bits
Score difference with first non-orthologous sequence - E.histolytica:74 P.ramorum:151

C4M9X0              	100.00%		H3GBM4              	100.00%
Bootstrap support for C4M9X0 as seed ortholog is 99%.
Bootstrap support for H3GBM4 as seed ortholog is 100%.

Group of orthologs #640. Best score 151 bits
Score difference with first non-orthologous sequence - E.histolytica:151 P.ramorum:151

B1N3J0              	100.00%		H3H019              	100.00%
Bootstrap support for B1N3J0 as seed ortholog is 100%.
Bootstrap support for H3H019 as seed ortholog is 100%.

Group of orthologs #641. Best score 151 bits
Score difference with first non-orthologous sequence - E.histolytica:151 P.ramorum:151

C4LWF1              	100.00%		H3GUH8              	100.00%
Bootstrap support for C4LWF1 as seed ortholog is 100%.
Bootstrap support for H3GUH8 as seed ortholog is 100%.

Group of orthologs #642. Best score 151 bits
Score difference with first non-orthologous sequence - E.histolytica:151 P.ramorum:151

C4LY75              	100.00%		H3H177              	100.00%
Bootstrap support for C4LY75 as seed ortholog is 100%.
Bootstrap support for H3H177 as seed ortholog is 100%.

Group of orthologs #643. Best score 150 bits
Score difference with first non-orthologous sequence - E.histolytica:17 P.ramorum:16

C4LXP5              	100.00%		H3HDG0              	100.00%
C4M2C0              	100.00%		
Q5NSZ3              	12.20%		
Bootstrap support for C4LXP5 as seed ortholog is 79%.
Bootstrap support for C4M2C0 as seed ortholog is 80%.
Bootstrap support for H3HDG0 as seed ortholog is 83%.

Group of orthologs #644. Best score 150 bits
Score difference with first non-orthologous sequence - E.histolytica:150 P.ramorum:150

C4M8C4              	100.00%		H3G7A1              	100.00%
C4M3A1              	58.22%		
Bootstrap support for C4M8C4 as seed ortholog is 100%.
Bootstrap support for H3G7A1 as seed ortholog is 100%.

Group of orthologs #645. Best score 150 bits
Score difference with first non-orthologous sequence - E.histolytica:150 P.ramorum:150

C4M2I4              	100.00%		H3H0X6              	100.00%
                    	       		H3HE22              	93.11%
Bootstrap support for C4M2I4 as seed ortholog is 100%.
Bootstrap support for H3H0X6 as seed ortholog is 100%.

Group of orthologs #646. Best score 150 bits
Score difference with first non-orthologous sequence - E.histolytica:150 P.ramorum:150

C4M182              	100.00%		H3GCB3              	100.00%
Bootstrap support for C4M182 as seed ortholog is 100%.
Bootstrap support for H3GCB3 as seed ortholog is 100%.

Group of orthologs #647. Best score 150 bits
Score difference with first non-orthologous sequence - E.histolytica:150 P.ramorum:150

C4M7Y4              	100.00%		H3GG33              	100.00%
Bootstrap support for C4M7Y4 as seed ortholog is 100%.
Bootstrap support for H3GG33 as seed ortholog is 100%.

Group of orthologs #648. Best score 150 bits
Score difference with first non-orthologous sequence - E.histolytica:150 P.ramorum:150

C4LTH5              	100.00%		H3HC32              	100.00%
Bootstrap support for C4LTH5 as seed ortholog is 100%.
Bootstrap support for H3HC32 as seed ortholog is 100%.

Group of orthologs #649. Best score 149 bits
Score difference with first non-orthologous sequence - E.histolytica:60 P.ramorum:149

C4MBH3              	100.00%		H3GTS8              	100.00%
C4LTG8              	18.07%		H3GFE6              	20.09%
C4LTY8              	12.52%		
Bootstrap support for C4MBH3 as seed ortholog is 93%.
Bootstrap support for H3GTS8 as seed ortholog is 100%.

Group of orthologs #650. Best score 149 bits
Score difference with first non-orthologous sequence - E.histolytica:36 P.ramorum:149

C4LVN8              	100.00%		H3G9M1              	100.00%
C4LSM2              	91.91%		
Bootstrap support for C4LVN8 as seed ortholog is 93%.
Bootstrap support for H3G9M1 as seed ortholog is 100%.

Group of orthologs #651. Best score 149 bits
Score difference with first non-orthologous sequence - E.histolytica:149 P.ramorum:149

C4MAW7              	100.00%		H3GAD8              	100.00%
B1N5R4              	34.38%		
Bootstrap support for C4MAW7 as seed ortholog is 100%.
Bootstrap support for H3GAD8 as seed ortholog is 100%.

Group of orthologs #652. Best score 149 bits
Score difference with first non-orthologous sequence - E.histolytica:149 P.ramorum:149

C4LSK4              	100.00%		H3GA47              	100.00%
Bootstrap support for C4LSK4 as seed ortholog is 100%.
Bootstrap support for H3GA47 as seed ortholog is 100%.

Group of orthologs #653. Best score 149 bits
Score difference with first non-orthologous sequence - E.histolytica:149 P.ramorum:149

C4LT09              	100.00%		H3GC32              	100.00%
Bootstrap support for C4LT09 as seed ortholog is 100%.
Bootstrap support for H3GC32 as seed ortholog is 100%.

Group of orthologs #654. Best score 149 bits
Score difference with first non-orthologous sequence - E.histolytica:149 P.ramorum:149

C4MA46              	100.00%		H3G8R9              	100.00%
Bootstrap support for C4MA46 as seed ortholog is 100%.
Bootstrap support for H3G8R9 as seed ortholog is 100%.

Group of orthologs #655. Best score 149 bits
Score difference with first non-orthologous sequence - E.histolytica:149 P.ramorum:149

C4M2M2              	100.00%		H3GZU7              	100.00%
Bootstrap support for C4M2M2 as seed ortholog is 100%.
Bootstrap support for H3GZU7 as seed ortholog is 100%.

Group of orthologs #656. Best score 148 bits
Score difference with first non-orthologous sequence - E.histolytica:148 P.ramorum:148

B1N3Y4              	100.00%		H3G786              	100.00%
C4M7D7              	97.10%		
C4MB41              	96.81%		
B1N540              	96.52%		
C4MBB6              	95.65%		
C4M9Q8              	95.36%		
C4M109              	95.07%		
Bootstrap support for B1N3Y4 as seed ortholog is 100%.
Bootstrap support for H3G786 as seed ortholog is 100%.

Group of orthologs #657. Best score 148 bits
Score difference with first non-orthologous sequence - E.histolytica:77 P.ramorum:72

C4LV49              	100.00%		H3G7W6              	100.00%
Bootstrap support for C4LV49 as seed ortholog is 98%.
Bootstrap support for H3G7W6 as seed ortholog is 98%.

Group of orthologs #658. Best score 148 bits
Score difference with first non-orthologous sequence - E.histolytica:148 P.ramorum:148

C4M5Q8              	100.00%		H3GJM3              	100.00%
Bootstrap support for C4M5Q8 as seed ortholog is 100%.
Bootstrap support for H3GJM3 as seed ortholog is 100%.

Group of orthologs #659. Best score 148 bits
Score difference with first non-orthologous sequence - E.histolytica:148 P.ramorum:77

C4LYN4              	100.00%		H3GWT2              	100.00%
Bootstrap support for C4LYN4 as seed ortholog is 100%.
Bootstrap support for H3GWT2 as seed ortholog is 95%.

Group of orthologs #660. Best score 147 bits
Score difference with first non-orthologous sequence - E.histolytica:57 P.ramorum:147

C4MB68              	100.00%		H3HCA8              	100.00%
C4M695              	26.76%		
C4M4M4              	25.62%		
C4LVZ5              	25.54%		
C4M275              	25.54%		
C4MA43              	25.31%		
C4M0B9              	25.16%		
C4M8B8              	25.01%		
C4M6Q6              	24.86%		
C4M5X8              	24.59%		
C4M1S0              	23.87%		
C4LWX5              	22.87%		
C4M3L3              	22.34%		
C4LUL7              	21.12%		
C4M360              	20.70%		
C4M5U4              	19.86%		
C4M024              	13.04%		
Bootstrap support for C4MB68 as seed ortholog is 74%.
Alternative seed ortholog is C4M1H4 (57 bits away from this cluster)
Bootstrap support for H3HCA8 as seed ortholog is 100%.

Group of orthologs #661. Best score 147 bits
Score difference with first non-orthologous sequence - E.histolytica:147 P.ramorum:147

C4LZ69              	100.00%		H3G9W2              	100.00%
C4M8P0              	90.72%		
Bootstrap support for C4LZ69 as seed ortholog is 100%.
Bootstrap support for H3G9W2 as seed ortholog is 100%.

Group of orthologs #662. Best score 147 bits
Score difference with first non-orthologous sequence - E.histolytica:85 P.ramorum:147

C4M3A8              	100.00%		H3GIG5              	100.00%
Bootstrap support for C4M3A8 as seed ortholog is 99%.
Bootstrap support for H3GIG5 as seed ortholog is 100%.

Group of orthologs #663. Best score 147 bits
Score difference with first non-orthologous sequence - E.histolytica:86 P.ramorum:45

C4LUW4              	100.00%		H3GSS2              	100.00%
Bootstrap support for C4LUW4 as seed ortholog is 96%.
Bootstrap support for H3GSS2 as seed ortholog is 86%.

Group of orthologs #664. Best score 146 bits
Score difference with first non-orthologous sequence - E.histolytica:146 P.ramorum:146

C4M0M6              	100.00%		H3G8X7              	100.00%
C4LX05              	87.86%		
C4M2J3              	86.41%		
Bootstrap support for C4M0M6 as seed ortholog is 100%.
Bootstrap support for H3G8X7 as seed ortholog is 100%.

Group of orthologs #665. Best score 146 bits
Score difference with first non-orthologous sequence - E.histolytica:146 P.ramorum:146

C4LUX4              	100.00%		H3GH25              	100.00%
Bootstrap support for C4LUX4 as seed ortholog is 100%.
Bootstrap support for H3GH25 as seed ortholog is 100%.

Group of orthologs #666. Best score 146 bits
Score difference with first non-orthologous sequence - E.histolytica:52 P.ramorum:146

Q1EQ11              	100.00%		H3G8F4              	100.00%
Bootstrap support for Q1EQ11 as seed ortholog is 98%.
Bootstrap support for H3G8F4 as seed ortholog is 100%.

Group of orthologs #667. Best score 146 bits
Score difference with first non-orthologous sequence - E.histolytica:146 P.ramorum:40

C4M554              	100.00%		H3GMV0              	100.00%
Bootstrap support for C4M554 as seed ortholog is 100%.
Bootstrap support for H3GMV0 as seed ortholog is 86%.

Group of orthologs #668. Best score 146 bits
Score difference with first non-orthologous sequence - E.histolytica:146 P.ramorum:146

C4M4F5              	100.00%		H3H442              	100.00%
Bootstrap support for C4M4F5 as seed ortholog is 100%.
Bootstrap support for H3H442 as seed ortholog is 100%.

Group of orthologs #669. Best score 145 bits
Score difference with first non-orthologous sequence - E.histolytica:95 P.ramorum:145

C4M4Z9              	100.00%		H3GJC5              	100.00%
Bootstrap support for C4M4Z9 as seed ortholog is 97%.
Bootstrap support for H3GJC5 as seed ortholog is 100%.

Group of orthologs #670. Best score 144 bits
Score difference with first non-orthologous sequence - E.histolytica:2 P.ramorum:144

C4LXC2              	100.00%		H3GNL8              	100.00%
C4M5B0              	15.07%		H3GN52              	13.68%
Bootstrap support for C4LXC2 as seed ortholog is 49%.
Alternative seed ortholog is C4LSK5 (2 bits away from this cluster)
Bootstrap support for H3GNL8 as seed ortholog is 100%.

Group of orthologs #671. Best score 144 bits
Score difference with first non-orthologous sequence - E.histolytica:144 P.ramorum:97

C4M1K1              	100.00%		H3GW85              	100.00%
B1N370              	66.18%		
Bootstrap support for C4M1K1 as seed ortholog is 100%.
Bootstrap support for H3GW85 as seed ortholog is 99%.

Group of orthologs #672. Best score 144 bits
Score difference with first non-orthologous sequence - E.histolytica:144 P.ramorum:144

C4LZ14              	100.00%		H3GAE3              	100.00%
Bootstrap support for C4LZ14 as seed ortholog is 100%.
Bootstrap support for H3GAE3 as seed ortholog is 100%.

Group of orthologs #673. Best score 144 bits
Score difference with first non-orthologous sequence - E.histolytica:144 P.ramorum:144

C4M5R2              	100.00%		H3GL53              	100.00%
Bootstrap support for C4M5R2 as seed ortholog is 100%.
Bootstrap support for H3GL53 as seed ortholog is 100%.

Group of orthologs #674. Best score 143 bits
Score difference with first non-orthologous sequence - E.histolytica:143 P.ramorum:143

C4LU03              	100.00%		H3GT98              	100.00%
C4M7N4              	88.60%		H3GC77              	20.93%
Bootstrap support for C4LU03 as seed ortholog is 100%.
Bootstrap support for H3GT98 as seed ortholog is 100%.

Group of orthologs #675. Best score 143 bits
Score difference with first non-orthologous sequence - E.histolytica:143 P.ramorum:47

C4M3T5              	100.00%		H3GTD3              	100.00%
C4M1Y9              	54.96%		
C4LZ04              	14.29%		
Bootstrap support for C4M3T5 as seed ortholog is 100%.
Bootstrap support for H3GTD3 as seed ortholog is 91%.

Group of orthologs #676. Best score 143 bits
Score difference with first non-orthologous sequence - E.histolytica:49 P.ramorum:143

C4M7U1              	100.00%		H3GQ77              	100.00%
                    	       		H3G6T4              	63.75%
Bootstrap support for C4M7U1 as seed ortholog is 86%.
Bootstrap support for H3GQ77 as seed ortholog is 100%.

Group of orthologs #677. Best score 143 bits
Score difference with first non-orthologous sequence - E.histolytica:54 P.ramorum:143

C4LX44              	100.00%		H3GG46              	100.00%
Bootstrap support for C4LX44 as seed ortholog is 83%.
Bootstrap support for H3GG46 as seed ortholog is 100%.

Group of orthologs #678. Best score 143 bits
Score difference with first non-orthologous sequence - E.histolytica:143 P.ramorum:143

C4LTP3              	100.00%		H3GKI1              	100.00%
Bootstrap support for C4LTP3 as seed ortholog is 100%.
Bootstrap support for H3GKI1 as seed ortholog is 100%.

Group of orthologs #679. Best score 143 bits
Score difference with first non-orthologous sequence - E.histolytica:143 P.ramorum:143

C4LU26              	100.00%		H3HBV9              	100.00%
Bootstrap support for C4LU26 as seed ortholog is 100%.
Bootstrap support for H3HBV9 as seed ortholog is 100%.

Group of orthologs #680. Best score 141 bits
Score difference with first non-orthologous sequence - E.histolytica:141 P.ramorum:141

C4LTS3              	100.00%		H3HDB3              	100.00%
Bootstrap support for C4LTS3 as seed ortholog is 100%.
Bootstrap support for H3HDB3 as seed ortholog is 100%.

Group of orthologs #681. Best score 140 bits
Score difference with first non-orthologous sequence - E.histolytica:95 P.ramorum:89

C4M2S8              	100.00%		H3G8H6              	100.00%
C4LTB8              	44.96%		
Bootstrap support for C4M2S8 as seed ortholog is 99%.
Bootstrap support for H3G8H6 as seed ortholog is 99%.

Group of orthologs #682. Best score 140 bits
Score difference with first non-orthologous sequence - E.histolytica:140 P.ramorum:140

C4LTQ9              	100.00%		H3GQD5              	100.00%
B1N2H3              	57.97%		
Bootstrap support for C4LTQ9 as seed ortholog is 100%.
Bootstrap support for H3GQD5 as seed ortholog is 100%.

Group of orthologs #683. Best score 140 bits
Score difference with first non-orthologous sequence - E.histolytica:140 P.ramorum:140

B1N2R2              	100.00%		H3G6D8              	100.00%
Bootstrap support for B1N2R2 as seed ortholog is 100%.
Bootstrap support for H3G6D8 as seed ortholog is 100%.

Group of orthologs #684. Best score 140 bits
Score difference with first non-orthologous sequence - E.histolytica:140 P.ramorum:140

C4M937              	100.00%		H3G610              	100.00%
Bootstrap support for C4M937 as seed ortholog is 100%.
Bootstrap support for H3G610 as seed ortholog is 100%.

Group of orthologs #685. Best score 139 bits
Score difference with first non-orthologous sequence - E.histolytica:65 P.ramorum:33

C4M218              	100.00%		H3GEL4              	100.00%
B1N3W0              	44.12%		H3GEL5              	37.30%
Bootstrap support for C4M218 as seed ortholog is 99%.
Bootstrap support for H3GEL4 as seed ortholog is 91%.

Group of orthologs #686. Best score 139 bits
Score difference with first non-orthologous sequence - E.histolytica:58 P.ramorum:63

C4LY85              	100.00%		H3G8V5              	100.00%
C4M760              	100.00%		
Bootstrap support for C4LY85 as seed ortholog is 100%.
Bootstrap support for C4M760 as seed ortholog is 100%.
Bootstrap support for H3G8V5 as seed ortholog is 100%.

Group of orthologs #687. Best score 139 bits
Score difference with first non-orthologous sequence - E.histolytica:139 P.ramorum:27

C4M746              	100.00%		H3GA66              	100.00%
                    	       		H3GB57              	98.42%
Bootstrap support for C4M746 as seed ortholog is 100%.
Bootstrap support for H3GA66 as seed ortholog is 76%.

Group of orthologs #688. Best score 139 bits
Score difference with first non-orthologous sequence - E.histolytica:139 P.ramorum:139

C4M1N3              	100.00%		H3GAV6              	100.00%
Bootstrap support for C4M1N3 as seed ortholog is 100%.
Bootstrap support for H3GAV6 as seed ortholog is 100%.

Group of orthologs #689. Best score 139 bits
Score difference with first non-orthologous sequence - E.histolytica:49 P.ramorum:139

C4M197              	100.00%		H3HDP1              	100.00%
Bootstrap support for C4M197 as seed ortholog is 98%.
Bootstrap support for H3HDP1 as seed ortholog is 100%.

Group of orthologs #690. Best score 138 bits
Score difference with first non-orthologous sequence - E.histolytica:138 P.ramorum:138

C4LWS5              	100.00%		H3G5C1              	100.00%
                    	       		H3G795              	17.70%
Bootstrap support for C4LWS5 as seed ortholog is 100%.
Bootstrap support for H3G5C1 as seed ortholog is 100%.

Group of orthologs #691. Best score 138 bits
Score difference with first non-orthologous sequence - E.histolytica:138 P.ramorum:138

C4LZT0              	100.00%		H3G8N7              	100.00%
Bootstrap support for C4LZT0 as seed ortholog is 100%.
Bootstrap support for H3G8N7 as seed ortholog is 100%.

Group of orthologs #692. Best score 137 bits
Score difference with first non-orthologous sequence - E.histolytica:30 P.ramorum:51

B1N550              	100.00%		H3GHI1              	100.00%
C4M4X4              	100.00%		
C4MA30              	90.23%		
B1N4U5              	76.92%		
C4M7D0              	76.54%		
C4MBN1              	51.03%		
B1N4R3              	49.28%		
B1N4L7              	47.33%		
B1N4V9              	46.60%		
B1N5Y2              	46.33%		
B1N4T5              	44.93%		
C4M8M5              	34.53%		
C4M3F9              	33.48%		
B1N342              	31.69%		
C4LUZ1              	30.86%		
C4MBB5              	29.01%		
B1N5W9              	26.75%		
B1N304              	21.30%		
C4LZW0              	13.17%		
Bootstrap support for B1N550 as seed ortholog is 78%.
Bootstrap support for C4M4X4 as seed ortholog is 76%.
Bootstrap support for H3GHI1 as seed ortholog is 89%.

Group of orthologs #693. Best score 137 bits
Score difference with first non-orthologous sequence - E.histolytica:11 P.ramorum:50

C4MA20              	100.00%		H3GVG5              	100.00%
                    	       		H3H6B0              	100.00%
                    	       		H3H344              	11.79%
                    	       		H3GFJ0              	10.70%
                    	       		H3HDH0              	5.02%
Bootstrap support for C4MA20 as seed ortholog is 63%.
Alternative seed ortholog is C4M1H4 (11 bits away from this cluster)
Bootstrap support for H3GVG5 as seed ortholog is 93%.
Bootstrap support for H3H6B0 as seed ortholog is 93%.

Group of orthologs #694. Best score 137 bits
Score difference with first non-orthologous sequence - E.histolytica:137 P.ramorum:137

C4LTC8              	100.00%		H3GPT4              	100.00%
C4M2P4              	19.10%		H3H5Z3              	100.00%
Bootstrap support for C4LTC8 as seed ortholog is 100%.
Bootstrap support for H3GPT4 as seed ortholog is 100%.
Bootstrap support for H3H5Z3 as seed ortholog is 100%.

Group of orthologs #695. Best score 137 bits
Score difference with first non-orthologous sequence - E.histolytica:137 P.ramorum:137

C4M3W8              	100.00%		H3G9D9              	100.00%
Bootstrap support for C4M3W8 as seed ortholog is 100%.
Bootstrap support for H3G9D9 as seed ortholog is 100%.

Group of orthologs #696. Best score 137 bits
Score difference with first non-orthologous sequence - E.histolytica:8 P.ramorum:55

C4MB03              	100.00%		H3GJ01              	100.00%
Bootstrap support for C4MB03 as seed ortholog is 61%.
Alternative seed ortholog is C4LVP2 (8 bits away from this cluster)
Bootstrap support for H3GJ01 as seed ortholog is 93%.

Group of orthologs #697. Best score 137 bits
Score difference with first non-orthologous sequence - E.histolytica:137 P.ramorum:137

C4M6A1              	100.00%		H3GY61              	100.00%
Bootstrap support for C4M6A1 as seed ortholog is 100%.
Bootstrap support for H3GY61 as seed ortholog is 100%.

Group of orthologs #698. Best score 136 bits
Score difference with first non-orthologous sequence - E.histolytica:136 P.ramorum:136

C4M7N8              	100.00%		H3G808              	100.00%
C4M0Z2              	98.96%		
C4M0P7              	96.88%		
Bootstrap support for C4M7N8 as seed ortholog is 100%.
Bootstrap support for H3G808 as seed ortholog is 100%.

Group of orthologs #699. Best score 136 bits
Score difference with first non-orthologous sequence - E.histolytica:47 P.ramorum:136

C4M2I9              	100.00%		H3G6D3              	100.00%
                    	       		H3G6D4              	89.05%
Bootstrap support for C4M2I9 as seed ortholog is 91%.
Bootstrap support for H3G6D3 as seed ortholog is 100%.

Group of orthologs #700. Best score 136 bits
Score difference with first non-orthologous sequence - E.histolytica:136 P.ramorum:136

C4LW89              	100.00%		H3GJN2              	100.00%
                    	       		H3HA61              	100.00%
Bootstrap support for C4LW89 as seed ortholog is 100%.
Bootstrap support for H3GJN2 as seed ortholog is 100%.
Bootstrap support for H3HA61 as seed ortholog is 100%.

Group of orthologs #701. Best score 136 bits
Score difference with first non-orthologous sequence - E.histolytica:136 P.ramorum:136

C4LYZ9              	100.00%		H3G8Z5              	100.00%
Bootstrap support for C4LYZ9 as seed ortholog is 100%.
Bootstrap support for H3G8Z5 as seed ortholog is 100%.

Group of orthologs #702. Best score 136 bits
Score difference with first non-orthologous sequence - E.histolytica:85 P.ramorum:91

C4LYM0              	100.00%		H3GAG1              	100.00%
Bootstrap support for C4LYM0 as seed ortholog is 99%.
Bootstrap support for H3GAG1 as seed ortholog is 99%.

Group of orthologs #703. Best score 136 bits
Score difference with first non-orthologous sequence - E.histolytica:136 P.ramorum:136

C4LV20              	100.00%		H3GFZ5              	100.00%
Bootstrap support for C4LV20 as seed ortholog is 100%.
Bootstrap support for H3GFZ5 as seed ortholog is 100%.

Group of orthologs #704. Best score 136 bits
Score difference with first non-orthologous sequence - E.histolytica:86 P.ramorum:82

C4M9T1              	100.00%		H3G796              	100.00%
Bootstrap support for C4M9T1 as seed ortholog is 99%.
Bootstrap support for H3G796 as seed ortholog is 99%.

Group of orthologs #705. Best score 135 bits
Score difference with first non-orthologous sequence - E.histolytica:44 P.ramorum:86

C4M2F0              	100.00%		H3GBA3              	100.00%
C4M9X1              	15.59%		H3GHJ3              	69.71%
C4M1W9              	9.36%		H3G8M0              	30.66%
C4MBH1              	8.97%		H3G9G3              	18.25%
                    	       		H3G8Z3              	17.88%
                    	       		H3G9M9              	17.88%
                    	       		H3GB66              	14.78%
                    	       		H3GJP2              	10.04%
Bootstrap support for C4M2F0 as seed ortholog is 90%.
Bootstrap support for H3GBA3 as seed ortholog is 99%.

Group of orthologs #706. Best score 135 bits
Score difference with first non-orthologous sequence - E.histolytica:14 P.ramorum:26

C4LWN8              	100.00%		H3HAQ4              	100.00%
Q5NT19              	40.74%		
Q5NT05              	12.70%		
Bootstrap support for C4LWN8 as seed ortholog is 67%.
Alternative seed ortholog is Q6AW65 (14 bits away from this cluster)
Bootstrap support for H3HAQ4 as seed ortholog is 78%.

Group of orthologs #707. Best score 135 bits
Score difference with first non-orthologous sequence - E.histolytica:135 P.ramorum:135

C4LZM4              	100.00%		H3GGW7              	100.00%
C4M5G7              	10.83%		
Bootstrap support for C4LZM4 as seed ortholog is 100%.
Bootstrap support for H3GGW7 as seed ortholog is 100%.

Group of orthologs #708. Best score 135 bits
Score difference with first non-orthologous sequence - E.histolytica:56 P.ramorum:81

C4M851              	100.00%		H3GAY3              	100.00%
Bootstrap support for C4M851 as seed ortholog is 98%.
Bootstrap support for H3GAY3 as seed ortholog is 99%.

Group of orthologs #709. Best score 135 bits
Score difference with first non-orthologous sequence - E.histolytica:84 P.ramorum:33

C4M2G1              	100.00%		H3H0P3              	100.00%
Bootstrap support for C4M2G1 as seed ortholog is 99%.
Bootstrap support for H3H0P3 as seed ortholog is 87%.

Group of orthologs #710. Best score 134 bits
Score difference with first non-orthologous sequence - E.histolytica:134 P.ramorum:134

C4MAF8              	100.00%		H3GLC1              	100.00%
C4M699              	18.80%		
C4M4H7              	13.75%		
C4M555              	13.62%		
C4LTU5              	13.30%		
C4M7G7              	12.92%		
C4LZD9              	10.10%		
C4M506              	5.88%		
C4LXW8              	5.50%		
Bootstrap support for C4MAF8 as seed ortholog is 100%.
Bootstrap support for H3GLC1 as seed ortholog is 100%.

Group of orthologs #711. Best score 134 bits
Score difference with first non-orthologous sequence - E.histolytica:134 P.ramorum:134

C4LWS0              	100.00%		H3G8P8              	100.00%
C4MA13              	98.36%		
Bootstrap support for C4LWS0 as seed ortholog is 100%.
Bootstrap support for H3G8P8 as seed ortholog is 100%.

Group of orthologs #712. Best score 134 bits
Score difference with first non-orthologous sequence - E.histolytica:134 P.ramorum:134

C4LZ52              	100.00%		H3GJ86              	100.00%
Bootstrap support for C4LZ52 as seed ortholog is 100%.
Bootstrap support for H3GJ86 as seed ortholog is 100%.

Group of orthologs #713. Best score 134 bits
Score difference with first non-orthologous sequence - E.histolytica:134 P.ramorum:80

C4LW11              	100.00%		H3GUK7              	100.00%
Bootstrap support for C4LW11 as seed ortholog is 100%.
Bootstrap support for H3GUK7 as seed ortholog is 97%.

Group of orthologs #714. Best score 134 bits
Score difference with first non-orthologous sequence - E.histolytica:134 P.ramorum:134

C4LVK6              	100.00%		H3HC64              	100.00%
Bootstrap support for C4LVK6 as seed ortholog is 100%.
Bootstrap support for H3HC64 as seed ortholog is 100%.

Group of orthologs #715. Best score 134 bits
Score difference with first non-orthologous sequence - E.histolytica:134 P.ramorum:134

C4M8I3              	100.00%		H3HEE5              	100.00%
Bootstrap support for C4M8I3 as seed ortholog is 100%.
Bootstrap support for H3HEE5 as seed ortholog is 100%.

Group of orthologs #716. Best score 133 bits
Score difference with first non-orthologous sequence - E.histolytica:133 P.ramorum:133

C4LTE3              	100.00%		H3G8Y2              	100.00%
C4M9F8              	100.00%		H3H2X8              	54.55%
C4LYF9              	99.63%		
Bootstrap support for C4LTE3 as seed ortholog is 100%.
Bootstrap support for C4M9F8 as seed ortholog is 100%.
Bootstrap support for H3G8Y2 as seed ortholog is 100%.

Group of orthologs #717. Best score 133 bits
Score difference with first non-orthologous sequence - E.histolytica:133 P.ramorum:51

C4M4S8              	100.00%		H3GDW0              	100.00%
                    	       		H3GR84              	7.83%
                    	       		H3GQM4              	5.65%
                    	       		H3GW25              	5.00%
Bootstrap support for C4M4S8 as seed ortholog is 100%.
Bootstrap support for H3GDW0 as seed ortholog is 91%.

Group of orthologs #718. Best score 133 bits
Score difference with first non-orthologous sequence - E.histolytica:133 P.ramorum:133

C4LSZ3              	100.00%		H3HD62              	100.00%
C4M0M9              	100.00%		H3G5A3              	92.06%
Bootstrap support for C4LSZ3 as seed ortholog is 100%.
Bootstrap support for C4M0M9 as seed ortholog is 100%.
Bootstrap support for H3HD62 as seed ortholog is 100%.

Group of orthologs #719. Best score 133 bits
Score difference with first non-orthologous sequence - E.histolytica:133 P.ramorum:133

C4LUI8              	100.00%		H3GI57              	100.00%
Bootstrap support for C4LUI8 as seed ortholog is 100%.
Bootstrap support for H3GI57 as seed ortholog is 100%.

Group of orthologs #720. Best score 133 bits
Score difference with first non-orthologous sequence - E.histolytica:46 P.ramorum:61

C4LUM0              	100.00%		H3GXG4              	100.00%
Bootstrap support for C4LUM0 as seed ortholog is 89%.
Bootstrap support for H3GXG4 as seed ortholog is 91%.

Group of orthologs #721. Best score 133 bits
Score difference with first non-orthologous sequence - E.histolytica:133 P.ramorum:133

C4LWP5              	100.00%		H3GY72              	100.00%
Bootstrap support for C4LWP5 as seed ortholog is 100%.
Bootstrap support for H3GY72 as seed ortholog is 100%.

Group of orthologs #722. Best score 132 bits
Score difference with first non-orthologous sequence - E.histolytica:132 P.ramorum:39

C4MBI7              	100.00%		H3GVK9              	100.00%
C4M4Q0              	11.46%		
Bootstrap support for C4MBI7 as seed ortholog is 100%.
Bootstrap support for H3GVK9 as seed ortholog is 91%.

Group of orthologs #723. Best score 132 bits
Score difference with first non-orthologous sequence - E.histolytica:132 P.ramorum:132

C4LS99              	100.00%		H3GAG5              	100.00%
Bootstrap support for C4LS99 as seed ortholog is 100%.
Bootstrap support for H3GAG5 as seed ortholog is 100%.

Group of orthologs #724. Best score 132 bits
Score difference with first non-orthologous sequence - E.histolytica:132 P.ramorum:132

C4LXC8              	100.00%		H3GFQ7              	100.00%
Bootstrap support for C4LXC8 as seed ortholog is 100%.
Bootstrap support for H3GFQ7 as seed ortholog is 100%.

Group of orthologs #725. Best score 132 bits
Score difference with first non-orthologous sequence - E.histolytica:132 P.ramorum:132

C4LSX2              	100.00%		H3GZ44              	100.00%
Bootstrap support for C4LSX2 as seed ortholog is 100%.
Bootstrap support for H3GZ44 as seed ortholog is 100%.

Group of orthologs #726. Best score 132 bits
Score difference with first non-orthologous sequence - E.histolytica:132 P.ramorum:132

Q1EQ33              	100.00%		H3GQ96              	100.00%
Bootstrap support for Q1EQ33 as seed ortholog is 100%.
Bootstrap support for H3GQ96 as seed ortholog is 100%.

Group of orthologs #727. Best score 131 bits
Score difference with first non-orthologous sequence - E.histolytica:131 P.ramorum:47

C4LV56              	100.00%		H3H0J3              	100.00%
C4MAA8              	46.17%		
C4M8E3              	37.40%		
Bootstrap support for C4LV56 as seed ortholog is 100%.
Bootstrap support for H3H0J3 as seed ortholog is 81%.

Group of orthologs #728. Best score 131 bits
Score difference with first non-orthologous sequence - E.histolytica:131 P.ramorum:131

C4M8I8              	100.00%		H3GGZ4              	100.00%
B1N3V1              	56.43%		
Bootstrap support for C4M8I8 as seed ortholog is 100%.
Bootstrap support for H3GGZ4 as seed ortholog is 100%.

Group of orthologs #729. Best score 131 bits
Score difference with first non-orthologous sequence - E.histolytica:131 P.ramorum:131

C4M0V9              	100.00%		H3GLL2              	100.00%
Bootstrap support for C4M0V9 as seed ortholog is 100%.
Bootstrap support for H3GLL2 as seed ortholog is 100%.

Group of orthologs #730. Best score 131 bits
Score difference with first non-orthologous sequence - E.histolytica:131 P.ramorum:131

C4M1G6              	100.00%		H3GLQ3              	100.00%
Bootstrap support for C4M1G6 as seed ortholog is 100%.
Bootstrap support for H3GLQ3 as seed ortholog is 100%.

Group of orthologs #731. Best score 131 bits
Score difference with first non-orthologous sequence - E.histolytica:131 P.ramorum:131

C4M7L1              	100.00%		H3GY73              	100.00%
Bootstrap support for C4M7L1 as seed ortholog is 100%.
Bootstrap support for H3GY73 as seed ortholog is 100%.

Group of orthologs #732. Best score 130 bits
Score difference with first non-orthologous sequence - E.histolytica:130 P.ramorum:130

C4LZZ0              	100.00%		H3GA71              	100.00%
C4M919              	95.12%		H3G9U1              	100.00%
Bootstrap support for C4LZZ0 as seed ortholog is 100%.
Bootstrap support for H3GA71 as seed ortholog is 100%.
Bootstrap support for H3G9U1 as seed ortholog is 100%.

Group of orthologs #733. Best score 130 bits
Score difference with first non-orthologous sequence - E.histolytica:130 P.ramorum:64

C4M3Y2              	100.00%		H3GMA7              	100.00%
                    	       		H3GGY9              	52.16%
                    	       		H3GM42              	15.20%
Bootstrap support for C4M3Y2 as seed ortholog is 100%.
Bootstrap support for H3GMA7 as seed ortholog is 97%.

Group of orthologs #734. Best score 130 bits
Score difference with first non-orthologous sequence - E.histolytica:130 P.ramorum:61

C4M1F5              	100.00%		H3GVN3              	100.00%
C4M7E8              	5.79%		
Bootstrap support for C4M1F5 as seed ortholog is 100%.
Bootstrap support for H3GVN3 as seed ortholog is 96%.

Group of orthologs #735. Best score 130 bits
Score difference with first non-orthologous sequence - E.histolytica:130 P.ramorum:9

B1N3V5              	100.00%		H3G6F5              	100.00%
Bootstrap support for B1N3V5 as seed ortholog is 100%.
Bootstrap support for H3G6F5 as seed ortholog is 59%.
Alternative seed ortholog is H3HAZ4 (9 bits away from this cluster)

Group of orthologs #736. Best score 129 bits
Score difference with first non-orthologous sequence - E.histolytica:129 P.ramorum:45

C4LX12              	100.00%		H3GI38              	100.00%
C4LVH4              	17.56%		
Q24823              	9.05%		
Bootstrap support for C4LX12 as seed ortholog is 100%.
Bootstrap support for H3GI38 as seed ortholog is 83%.

Group of orthologs #737. Best score 129 bits
Score difference with first non-orthologous sequence - E.histolytica:129 P.ramorum:129

B1N4Q4              	100.00%		H3GWN5              	100.00%
                    	       		H3GS24              	7.39%
Bootstrap support for B1N4Q4 as seed ortholog is 100%.
Bootstrap support for H3GWN5 as seed ortholog is 100%.

Group of orthologs #738. Best score 129 bits
Score difference with first non-orthologous sequence - E.histolytica:129 P.ramorum:129

C4M7M4              	100.00%		H3GY40              	100.00%
C4M655              	21.19%		
Bootstrap support for C4M7M4 as seed ortholog is 100%.
Bootstrap support for H3GY40 as seed ortholog is 100%.

Group of orthologs #739. Best score 129 bits
Score difference with first non-orthologous sequence - E.histolytica:129 P.ramorum:129

C4M772              	100.00%		H3GFT3              	100.00%
Bootstrap support for C4M772 as seed ortholog is 100%.
Bootstrap support for H3GFT3 as seed ortholog is 100%.

Group of orthologs #740. Best score 129 bits
Score difference with first non-orthologous sequence - E.histolytica:129 P.ramorum:129

C4M2U8              	100.00%		H3GNT4              	100.00%
Bootstrap support for C4M2U8 as seed ortholog is 100%.
Bootstrap support for H3GNT4 as seed ortholog is 100%.

Group of orthologs #741. Best score 128 bits
Score difference with first non-orthologous sequence - E.histolytica:128 P.ramorum:80

C4M079              	100.00%		H3GWK8              	100.00%
                    	       		H3G961              	6.61%
Bootstrap support for C4M079 as seed ortholog is 100%.
Bootstrap support for H3GWK8 as seed ortholog is 99%.

Group of orthologs #742. Best score 128 bits
Score difference with first non-orthologous sequence - E.histolytica:128 P.ramorum:128

C4LSB8              	100.00%		H3GNM2              	100.00%
Bootstrap support for C4LSB8 as seed ortholog is 100%.
Bootstrap support for H3GNM2 as seed ortholog is 100%.

Group of orthologs #743. Best score 127 bits
Score difference with first non-orthologous sequence - E.histolytica:127 P.ramorum:28

C4LW06              	100.00%		H3GAL2              	100.00%
C4M2W3              	92.97%		H3GAL3              	93.24%
Bootstrap support for C4LW06 as seed ortholog is 100%.
Bootstrap support for H3GAL2 as seed ortholog is 88%.

Group of orthologs #744. Best score 127 bits
Score difference with first non-orthologous sequence - E.histolytica:127 P.ramorum:127

C4LV69              	100.00%		H3G997              	100.00%
C4LWK0              	100.00%		
Bootstrap support for C4LV69 as seed ortholog is 100%.
Bootstrap support for C4LWK0 as seed ortholog is 100%.
Bootstrap support for H3G997 as seed ortholog is 100%.

Group of orthologs #745. Best score 126 bits
Score difference with first non-orthologous sequence - E.histolytica:126 P.ramorum:126

C4M455              	100.00%		H3GU05              	100.00%
C4M315              	63.32%		H3GU04              	47.16%
C4LXW0              	62.68%		H3GRZ4              	38.70%
C4M674              	45.36%		H3GMF1              	36.12%
C4M7N9              	39.09%		H3H5C0              	35.29%
C4M4I1              	35.14%		H3GMF0              	35.19%
C4M519              	11.18%		H3GYV8              	34.57%
C4M185              	7.00%		H3GMR2              	34.06%
                    	       		H3GRX5              	32.51%
                    	       		H3GTZ9              	31.89%
                    	       		H3GXX7              	31.37%
                    	       		H3GMQ9              	31.17%
                    	       		H3GMR4              	29.82%
                    	       		H3GMR1              	27.86%
                    	       		H3H0I9              	26.42%
                    	       		H3GUT7              	25.39%
                    	       		H3GZ86              	25.08%
                    	       		H3GCN5              	22.81%
                    	       		H3HD36              	22.81%
                    	       		H3HD37              	22.70%
                    	       		H3HAZ5              	22.50%
                    	       		H3GTX9              	22.08%
                    	       		H3GXX9              	21.57%
                    	       		H3H924              	21.16%
                    	       		H3HAH9              	19.40%
                    	       		H3GJF2              	18.47%
                    	       		H3GXX4              	16.62%
                    	       		H3GIU1              	14.96%
                    	       		H3GYQ0              	13.83%
                    	       		H3H0L7              	13.00%
                    	       		H3GC01              	12.49%
                    	       		H3GC06              	12.28%
                    	       		H3GVC6              	12.18%
                    	       		H3GVC7              	11.35%
                    	       		H3GGD5              	7.84%
                    	       		H3GTX7              	6.91%
                    	       		H3GJL4              	5.57%
Bootstrap support for C4M455 as seed ortholog is 100%.
Bootstrap support for H3GU05 as seed ortholog is 100%.

Group of orthologs #746. Best score 126 bits
Score difference with first non-orthologous sequence - E.histolytica:126 P.ramorum:126

C4M0D4              	100.00%		H3GNV8              	100.00%
B1N344              	56.50%		
Bootstrap support for C4M0D4 as seed ortholog is 100%.
Bootstrap support for H3GNV8 as seed ortholog is 100%.

Group of orthologs #747. Best score 126 bits
Score difference with first non-orthologous sequence - E.histolytica:126 P.ramorum:126

C4M2V8              	100.00%		H3GPG0              	100.00%
C4M3X2              	78.29%		
Bootstrap support for C4M2V8 as seed ortholog is 100%.
Bootstrap support for H3GPG0 as seed ortholog is 100%.

Group of orthologs #748. Best score 126 bits
Score difference with first non-orthologous sequence - E.histolytica:126 P.ramorum:126

C4M098              	100.00%		H3GVM4              	100.00%
Bootstrap support for C4M098 as seed ortholog is 100%.
Bootstrap support for H3GVM4 as seed ortholog is 100%.

Group of orthologs #749. Best score 125 bits
Score difference with first non-orthologous sequence - E.histolytica:125 P.ramorum:125

C4LUN2              	100.00%		H3G783              	100.00%
Bootstrap support for C4LUN2 as seed ortholog is 100%.
Bootstrap support for H3G783 as seed ortholog is 100%.

Group of orthologs #750. Best score 125 bits
Score difference with first non-orthologous sequence - E.histolytica:125 P.ramorum:125

C4LYE0              	100.00%		H3G9R6              	100.00%
Bootstrap support for C4LYE0 as seed ortholog is 100%.
Bootstrap support for H3G9R6 as seed ortholog is 100%.

Group of orthologs #751. Best score 125 bits
Score difference with first non-orthologous sequence - E.histolytica:125 P.ramorum:2

B1N4K0              	100.00%		H3GT41              	100.00%
Bootstrap support for B1N4K0 as seed ortholog is 100%.
Bootstrap support for H3GT41 as seed ortholog is 57%.
Alternative seed ortholog is H3HCW6 (2 bits away from this cluster)

Group of orthologs #752. Best score 125 bits
Score difference with first non-orthologous sequence - E.histolytica:125 P.ramorum:125

C4LV64              	100.00%		H3GQX2              	100.00%
Bootstrap support for C4LV64 as seed ortholog is 100%.
Bootstrap support for H3GQX2 as seed ortholog is 100%.

Group of orthologs #753. Best score 125 bits
Score difference with first non-orthologous sequence - E.histolytica:125 P.ramorum:125

C4LZN2              	100.00%		H3GV42              	100.00%
Bootstrap support for C4LZN2 as seed ortholog is 100%.
Bootstrap support for H3GV42 as seed ortholog is 100%.

Group of orthologs #754. Best score 124 bits
Score difference with first non-orthologous sequence - E.histolytica:9 P.ramorum:10

Q966U6              	100.00%		H3GRW8              	100.00%
C4M9X3              	5.42%		
C4M359              	5.21%		
Bootstrap support for Q966U6 as seed ortholog is 64%.
Alternative seed ortholog is B1N2Y6 (9 bits away from this cluster)
Bootstrap support for H3GRW8 as seed ortholog is 60%.
Alternative seed ortholog is H3GBW3 (10 bits away from this cluster)

Group of orthologs #755. Best score 124 bits
Score difference with first non-orthologous sequence - E.histolytica:46 P.ramorum:47

C4M9L2              	100.00%		H3G6E1              	100.00%
Bootstrap support for C4M9L2 as seed ortholog is 97%.
Bootstrap support for H3G6E1 as seed ortholog is 96%.

Group of orthologs #756. Best score 124 bits
Score difference with first non-orthologous sequence - E.histolytica:124 P.ramorum:124

C4LVZ4              	100.00%		H3GSP4              	100.00%
Bootstrap support for C4LVZ4 as seed ortholog is 100%.
Bootstrap support for H3GSP4 as seed ortholog is 100%.

Group of orthologs #757. Best score 123 bits
Score difference with first non-orthologous sequence - E.histolytica:65 P.ramorum:123

C4LUT0              	100.00%		H3G9H2              	100.00%
C4M301              	100.00%		
C4MA15              	76.37%		
Bootstrap support for C4LUT0 as seed ortholog is 97%.
Bootstrap support for C4M301 as seed ortholog is 98%.
Bootstrap support for H3G9H2 as seed ortholog is 100%.

Group of orthologs #758. Best score 123 bits
Score difference with first non-orthologous sequence - E.histolytica:123 P.ramorum:28

C4M4I0              	100.00%		H3G929              	100.00%
C4M162              	6.20%		
Bootstrap support for C4M4I0 as seed ortholog is 100%.
Bootstrap support for H3G929 as seed ortholog is 76%.

Group of orthologs #759. Best score 123 bits
Score difference with first non-orthologous sequence - E.histolytica:123 P.ramorum:123

C4M352              	100.00%		H3GKX8              	100.00%
Bootstrap support for C4M352 as seed ortholog is 100%.
Bootstrap support for H3GKX8 as seed ortholog is 100%.

Group of orthologs #760. Best score 123 bits
Score difference with first non-orthologous sequence - E.histolytica:49 P.ramorum:29

C4M7C6              	100.00%		H3HE21              	100.00%
Bootstrap support for C4M7C6 as seed ortholog is 97%.
Bootstrap support for H3HE21 as seed ortholog is 83%.

Group of orthologs #761. Best score 122 bits
Score difference with first non-orthologous sequence - E.histolytica:122 P.ramorum:122

C4M6U0              	100.00%		H3G934              	100.00%
Bootstrap support for C4M6U0 as seed ortholog is 100%.
Bootstrap support for H3G934 as seed ortholog is 100%.

Group of orthologs #762. Best score 122 bits
Score difference with first non-orthologous sequence - E.histolytica:18 P.ramorum:49

C4MBH4              	100.00%		H3GMU5              	100.00%
Bootstrap support for C4MBH4 as seed ortholog is 70%.
Alternative seed ortholog is C4M9B4 (18 bits away from this cluster)
Bootstrap support for H3GMU5 as seed ortholog is 91%.

Group of orthologs #763. Best score 121 bits
Score difference with first non-orthologous sequence - E.histolytica:121 P.ramorum:121

C4M9E8              	100.00%		H3HE72              	100.00%
B1N339              	40.28%		
C4M0B8              	27.12%		
C4LTT5              	24.85%		
C4M282              	22.76%		
C4M410              	22.72%		
C4MAR1              	20.37%		
B1N574              	19.79%		
B1N2Q1              	19.64%		
C4M7Q9              	19.60%		
C4M8J0              	19.33%		
C4LUZ4              	19.25%		
C4LU09              	19.14%		
C4LXM6              	19.10%		
C4MBD2              	19.10%		
B1N4R4              	18.71%		
C4M6P7              	18.25%		
C4LX15              	18.13%		
C4LSS9              	17.52%		
C4MA57              	17.32%		
C4LUS6              	16.63%		
C4M256              	16.55%		
B1N5C2              	16.05%		
C4M683              	15.86%		
C4LTV2              	15.74%		
C4LUB2              	15.47%		
C4LYK3              	15.35%		
C4M963              	15.32%		
C4M446              	15.16%		
C4LTS1              	13.77%		
C4M2D7              	13.58%		
C4M7Z7              	12.46%		
C4LXW7              	5.83%		
Bootstrap support for C4M9E8 as seed ortholog is 100%.
Bootstrap support for H3HE72 as seed ortholog is 100%.

Group of orthologs #764. Best score 121 bits
Score difference with first non-orthologous sequence - E.histolytica:121 P.ramorum:121

C4LVK8              	100.00%		H3H2F7              	100.00%
C4LU62              	41.45%		H3H2F4              	61.06%
C4M9R8              	39.08%		H3H2F6              	60.08%
C4LTL5              	38.64%		H3H2F9              	47.92%
C4M8T7              	26.49%		H3H2F3              	39.02%
B1N383              	23.24%		H3H2F5              	38.37%
C4M046              	16.80%		H3H2F8              	34.69%
                    	       		H3GQ40              	22.61%
                    	       		H3H2G0              	18.94%
                    	       		H3GIS4              	16.16%
                    	       		H3GLS9              	16.16%
                    	       		H3H2F0              	13.63%
                    	       		H3GLT0              	13.31%
                    	       		H3GTX6              	10.04%
                    	       		H3GTX8              	7.43%
Bootstrap support for C4LVK8 as seed ortholog is 100%.
Bootstrap support for H3H2F7 as seed ortholog is 100%.

Group of orthologs #765. Best score 121 bits
Score difference with first non-orthologous sequence - E.histolytica:121 P.ramorum:121

C4M6M2              	100.00%		H3GRL7              	100.00%
C4LXU6              	100.00%		H3GYG6              	100.00%
C4LVX8              	32.03%		H3GLT4              	25.60%
C4M2X4              	20.76%		H3GUC1              	7.43%
C4M258              	6.68%		H3HBE9              	6.92%
                    	       		H3GX25              	6.55%
                    	       		H3GR33              	6.14%
Bootstrap support for C4M6M2 as seed ortholog is 100%.
Bootstrap support for C4LXU6 as seed ortholog is 100%.
Bootstrap support for H3GRL7 as seed ortholog is 100%.
Bootstrap support for H3GYG6 as seed ortholog is 100%.

Group of orthologs #766. Best score 121 bits
Score difference with first non-orthologous sequence - E.histolytica:121 P.ramorum:121

C4M466              	100.00%		H3GAS8              	100.00%
C4M5V7              	100.00%		
Bootstrap support for C4M466 as seed ortholog is 100%.
Bootstrap support for C4M5V7 as seed ortholog is 100%.
Bootstrap support for H3GAS8 as seed ortholog is 100%.

Group of orthologs #767. Best score 121 bits
Score difference with first non-orthologous sequence - E.histolytica:121 P.ramorum:121

C4LW30              	100.00%		H3G704              	100.00%
Bootstrap support for C4LW30 as seed ortholog is 100%.
Bootstrap support for H3G704 as seed ortholog is 100%.

Group of orthologs #768. Best score 121 bits
Score difference with first non-orthologous sequence - E.histolytica:121 P.ramorum:121

C4LY48              	100.00%		H3G8V1              	100.00%
Bootstrap support for C4LY48 as seed ortholog is 100%.
Bootstrap support for H3G8V1 as seed ortholog is 100%.

Group of orthologs #769. Best score 121 bits
Score difference with first non-orthologous sequence - E.histolytica:121 P.ramorum:121

C4LZV3              	100.00%		H3G9P1              	100.00%
Bootstrap support for C4LZV3 as seed ortholog is 100%.
Bootstrap support for H3G9P1 as seed ortholog is 100%.

Group of orthologs #770. Best score 121 bits
Score difference with first non-orthologous sequence - E.histolytica:121 P.ramorum:121

C4M9N3              	100.00%		H3GAM6              	100.00%
Bootstrap support for C4M9N3 as seed ortholog is 100%.
Bootstrap support for H3GAM6 as seed ortholog is 100%.

Group of orthologs #771. Best score 120 bits
Score difference with first non-orthologous sequence - E.histolytica:120 P.ramorum:120

C4LY65              	100.00%		H3GL92              	100.00%
B1N2M8              	49.27%		H3GL91              	22.82%
C4LW53              	22.73%		
C4MAH3              	19.35%		
C4LSM7              	15.54%		
Bootstrap support for C4LY65 as seed ortholog is 100%.
Bootstrap support for H3GL92 as seed ortholog is 100%.

Group of orthologs #772. Best score 120 bits
Score difference with first non-orthologous sequence - E.histolytica:120 P.ramorum:67

C4M349              	100.00%		H3GR15              	100.00%
                    	       		H3GR16              	52.48%
Bootstrap support for C4M349 as seed ortholog is 100%.
Bootstrap support for H3GR15 as seed ortholog is 92%.

Group of orthologs #773. Best score 120 bits
Score difference with first non-orthologous sequence - E.histolytica:120 P.ramorum:120

C4M3L2              	100.00%		H3GV11              	100.00%
Bootstrap support for C4M3L2 as seed ortholog is 100%.
Bootstrap support for H3GV11 as seed ortholog is 100%.

Group of orthologs #774. Best score 119 bits
Score difference with first non-orthologous sequence - E.histolytica:119 P.ramorum:46

C4LW35              	100.00%		H3G6Y0              	100.00%
C4M7A6              	100.00%		H3H4J9              	100.00%
C4LSN8              	11.44%		
C4MAZ7              	6.69%		
Bootstrap support for C4LW35 as seed ortholog is 100%.
Bootstrap support for C4M7A6 as seed ortholog is 100%.
Bootstrap support for H3G6Y0 as seed ortholog is 95%.
Bootstrap support for H3H4J9 as seed ortholog is 94%.

Group of orthologs #775. Best score 119 bits
Score difference with first non-orthologous sequence - E.histolytica:34 P.ramorum:8

Q76KF6              	100.00%		H3G4Z8              	100.00%
                    	       		H3GAI8              	91.81%
                    	       		H3GAI7              	65.09%
Bootstrap support for Q76KF6 as seed ortholog is 86%.
Bootstrap support for H3G4Z8 as seed ortholog is 60%.
Alternative seed ortholog is H3G900 (8 bits away from this cluster)

Group of orthologs #776. Best score 119 bits
Score difference with first non-orthologous sequence - E.histolytica:119 P.ramorum:45

B1N302              	100.00%		H3H1S8              	100.00%
C4LUU9              	100.00%		
C4LTA4              	10.41%		
Bootstrap support for B1N302 as seed ortholog is 100%.
Bootstrap support for C4LUU9 as seed ortholog is 100%.
Bootstrap support for H3H1S8 as seed ortholog is 92%.

Group of orthologs #777. Best score 119 bits
Score difference with first non-orthologous sequence - E.histolytica:119 P.ramorum:119

C4LVW1              	100.00%		H3GIT4              	100.00%
                    	       		H3HCQ6              	6.16%
Bootstrap support for C4LVW1 as seed ortholog is 100%.
Bootstrap support for H3GIT4 as seed ortholog is 100%.

Group of orthologs #778. Best score 119 bits
Score difference with first non-orthologous sequence - E.histolytica:119 P.ramorum:119

C4M549              	100.00%		H3GAN1              	100.00%
C4LT49              	98.18%		
Bootstrap support for C4M549 as seed ortholog is 100%.
Bootstrap support for H3GAN1 as seed ortholog is 100%.

Group of orthologs #779. Best score 119 bits
Score difference with first non-orthologous sequence - E.histolytica:59 P.ramorum:119

C4MAR5              	100.00%		H3G763              	100.00%
Bootstrap support for C4MAR5 as seed ortholog is 84%.
Bootstrap support for H3G763 as seed ortholog is 100%.

Group of orthologs #780. Best score 119 bits
Score difference with first non-orthologous sequence - E.histolytica:119 P.ramorum:119

C4LT78              	100.00%		H3GU63              	100.00%
Bootstrap support for C4LT78 as seed ortholog is 100%.
Bootstrap support for H3GU63 as seed ortholog is 100%.

Group of orthologs #781. Best score 119 bits
Score difference with first non-orthologous sequence - E.histolytica:119 P.ramorum:119

C4LUA6              	100.00%		H3GV43              	100.00%
Bootstrap support for C4LUA6 as seed ortholog is 100%.
Bootstrap support for H3GV43 as seed ortholog is 100%.

Group of orthologs #782. Best score 119 bits
Score difference with first non-orthologous sequence - E.histolytica:119 P.ramorum:119

C4M0T6              	100.00%		H3GSI1              	100.00%
Bootstrap support for C4M0T6 as seed ortholog is 100%.
Bootstrap support for H3GSI1 as seed ortholog is 100%.

Group of orthologs #783. Best score 119 bits
Score difference with first non-orthologous sequence - E.histolytica:119 P.ramorum:119

C4M4F3              	100.00%		H3GVF3              	100.00%
Bootstrap support for C4M4F3 as seed ortholog is 100%.
Bootstrap support for H3GVF3 as seed ortholog is 100%.

Group of orthologs #784. Best score 118 bits
Score difference with first non-orthologous sequence - E.histolytica:118 P.ramorum:118

C4M093              	100.00%		H3GEM9              	100.00%
C4LW73              	100.00%		H3H170              	100.00%
C4M8K9              	5.07%		H3H171              	100.00%
                    	       		H3H6P7              	100.00%
                    	       		H3GYJ1              	15.01%
                    	       		H3GUG3              	13.70%
                    	       		H3H8B9              	10.16%
                    	       		H3GCN4              	8.54%
                    	       		H3GGF8              	5.85%
Bootstrap support for C4M093 as seed ortholog is 100%.
Bootstrap support for C4LW73 as seed ortholog is 100%.
Bootstrap support for H3GEM9 as seed ortholog is 100%.
Bootstrap support for H3H170 as seed ortholog is 100%.
Bootstrap support for H3H171 as seed ortholog is 100%.
Bootstrap support for H3H6P7 as seed ortholog is 100%.

Group of orthologs #785. Best score 118 bits
Score difference with first non-orthologous sequence - E.histolytica:118 P.ramorum:118

C4LSE7              	100.00%		H3G990              	100.00%
C4LVM2              	100.00%		
Bootstrap support for C4LSE7 as seed ortholog is 100%.
Bootstrap support for C4LVM2 as seed ortholog is 100%.
Bootstrap support for H3G990 as seed ortholog is 100%.

Group of orthologs #786. Best score 118 bits
Score difference with first non-orthologous sequence - E.histolytica:118 P.ramorum:39

C4LV51              	100.00%		H3GML2              	100.00%
C4M8S9              	6.69%		
Bootstrap support for C4LV51 as seed ortholog is 100%.
Bootstrap support for H3GML2 as seed ortholog is 66%.
Alternative seed ortholog is H3GI31 (39 bits away from this cluster)

Group of orthologs #787. Best score 118 bits
Score difference with first non-orthologous sequence - E.histolytica:118 P.ramorum:118

C4LYT3              	100.00%		H3H398              	100.00%
C4M2H7              	49.03%		
Bootstrap support for C4LYT3 as seed ortholog is 100%.
Bootstrap support for H3H398 as seed ortholog is 100%.

Group of orthologs #788. Best score 118 bits
Score difference with first non-orthologous sequence - E.histolytica:118 P.ramorum:118

C4M8P1              	100.00%		H3G9I1              	100.00%
Bootstrap support for C4M8P1 as seed ortholog is 100%.
Bootstrap support for H3G9I1 as seed ortholog is 100%.

Group of orthologs #789. Best score 118 bits
Score difference with first non-orthologous sequence - E.histolytica:118 P.ramorum:118

C4M616              	100.00%		H3GCT1              	100.00%
Bootstrap support for C4M616 as seed ortholog is 100%.
Bootstrap support for H3GCT1 as seed ortholog is 100%.

Group of orthologs #790. Best score 118 bits
Score difference with first non-orthologous sequence - E.histolytica:118 P.ramorum:118

C4MAL4              	100.00%		H3GNK7              	100.00%
Bootstrap support for C4MAL4 as seed ortholog is 100%.
Bootstrap support for H3GNK7 as seed ortholog is 100%.

Group of orthologs #791. Best score 118 bits
Score difference with first non-orthologous sequence - E.histolytica:118 P.ramorum:118

C4LXZ0              	100.00%		H3H534              	100.00%
Bootstrap support for C4LXZ0 as seed ortholog is 100%.
Bootstrap support for H3H534 as seed ortholog is 100%.

Group of orthologs #792. Best score 117 bits
Score difference with first non-orthologous sequence - E.histolytica:117 P.ramorum:117

C4M3N6              	100.00%		H3GUI4              	100.00%
Bootstrap support for C4M3N6 as seed ortholog is 100%.
Bootstrap support for H3GUI4 as seed ortholog is 100%.

Group of orthologs #793. Best score 116 bits
Score difference with first non-orthologous sequence - E.histolytica:116 P.ramorum:50

C4M4K0              	100.00%		H3H161              	100.00%
C4LXF4              	44.76%		H3H9X8              	40.33%
C4LSH2              	39.51%		
C4LVU0              	38.64%		
C4M4U4              	31.29%		
Bootstrap support for C4M4K0 as seed ortholog is 100%.
Bootstrap support for H3H161 as seed ortholog is 94%.

Group of orthologs #794. Best score 116 bits
Score difference with first non-orthologous sequence - E.histolytica:116 P.ramorum:116

C4LWE6              	100.00%		H3H0Z2              	100.00%
C4LSF0              	13.00%		
Bootstrap support for C4LWE6 as seed ortholog is 100%.
Bootstrap support for H3H0Z2 as seed ortholog is 100%.

Group of orthologs #795. Best score 116 bits
Score difference with first non-orthologous sequence - E.histolytica:116 P.ramorum:116

C4M1S3              	100.00%		H3GA87              	100.00%
Bootstrap support for C4M1S3 as seed ortholog is 100%.
Bootstrap support for H3GA87 as seed ortholog is 100%.

Group of orthologs #796. Best score 116 bits
Score difference with first non-orthologous sequence - E.histolytica:116 P.ramorum:116

C4M1A7              	100.00%		H3GAU5              	100.00%
Bootstrap support for C4M1A7 as seed ortholog is 100%.
Bootstrap support for H3GAU5 as seed ortholog is 100%.

Group of orthologs #797. Best score 116 bits
Score difference with first non-orthologous sequence - E.histolytica:116 P.ramorum:116

B1N2P8              	100.00%		H3GTU2              	100.00%
Bootstrap support for B1N2P8 as seed ortholog is 100%.
Bootstrap support for H3GTU2 as seed ortholog is 100%.

Group of orthologs #798. Best score 116 bits
Score difference with first non-orthologous sequence - E.histolytica:116 P.ramorum:116

C4LU65              	100.00%		H3GYG9              	100.00%
Bootstrap support for C4LU65 as seed ortholog is 100%.
Bootstrap support for H3GYG9 as seed ortholog is 100%.

Group of orthologs #799. Best score 115 bits
Score difference with first non-orthologous sequence - E.histolytica:115 P.ramorum:50

C4LVL2              	100.00%		H3H3B5              	100.00%
                    	       		H3GYE7              	84.47%
                    	       		H3GYF0              	84.47%
                    	       		H3H1J7              	82.20%
                    	       		H3H3B4              	70.27%
                    	       		H3GQJ6              	31.06%
                    	       		H3GQJ5              	28.60%
                    	       		H3GUH5              	28.60%
                    	       		H3GQJ7              	27.84%
Bootstrap support for C4LVL2 as seed ortholog is 100%.
Bootstrap support for H3H3B5 as seed ortholog is 90%.

Group of orthologs #800. Best score 115 bits
Score difference with first non-orthologous sequence - E.histolytica:115 P.ramorum:115

C4M7N6              	100.00%		H3HAX9              	100.00%
C4MBQ0              	17.80%		
B1N3N3              	16.13%		
C4LZH4              	12.52%		
Bootstrap support for C4M7N6 as seed ortholog is 100%.
Bootstrap support for H3HAX9 as seed ortholog is 100%.

Group of orthologs #801. Best score 115 bits
Score difference with first non-orthologous sequence - E.histolytica:61 P.ramorum:56

C4LZ58              	100.00%		H3GGW6              	100.00%
Bootstrap support for C4LZ58 as seed ortholog is 99%.
Bootstrap support for H3GGW6 as seed ortholog is 88%.

Group of orthologs #802. Best score 115 bits
Score difference with first non-orthologous sequence - E.histolytica:115 P.ramorum:115

C4M924              	100.00%		H3G8C2              	100.00%
Bootstrap support for C4M924 as seed ortholog is 100%.
Bootstrap support for H3G8C2 as seed ortholog is 100%.

Group of orthologs #803. Best score 115 bits
Score difference with first non-orthologous sequence - E.histolytica:115 P.ramorum:115

C4M5P4              	100.00%		H3GBZ0              	100.00%
Bootstrap support for C4M5P4 as seed ortholog is 100%.
Bootstrap support for H3GBZ0 as seed ortholog is 100%.

Group of orthologs #804. Best score 115 bits
Score difference with first non-orthologous sequence - E.histolytica:115 P.ramorum:115

C4LTU8              	100.00%		H3HB24              	100.00%
Bootstrap support for C4LTU8 as seed ortholog is 100%.
Bootstrap support for H3HB24 as seed ortholog is 100%.

Group of orthologs #805. Best score 114 bits
Score difference with first non-orthologous sequence - E.histolytica:114 P.ramorum:114

C4LVX1              	100.00%		H3GM04              	100.00%
B1N4A5              	8.07%		H3GI49              	10.54%
C4M7W0              	7.38%		H3HE84              	9.14%
C4M4Q7              	6.99%		H3H2F2              	8.11%
C4M5H2              	6.99%		
C4M7D1              	5.15%		
Bootstrap support for C4LVX1 as seed ortholog is 100%.
Bootstrap support for H3GM04 as seed ortholog is 100%.

Group of orthologs #806. Best score 114 bits
Score difference with first non-orthologous sequence - E.histolytica:114 P.ramorum:114

C4LUH4              	100.00%		H3GLU2              	100.00%
C4M4T1              	13.26%		
Bootstrap support for C4LUH4 as seed ortholog is 100%.
Bootstrap support for H3GLU2 as seed ortholog is 100%.

Group of orthologs #807. Best score 114 bits
Score difference with first non-orthologous sequence - E.histolytica:31 P.ramorum:33

C4M651              	100.00%		H3GXG5              	100.00%
Bootstrap support for C4M651 as seed ortholog is 85%.
Bootstrap support for H3GXG5 as seed ortholog is 84%.

Group of orthologs #808. Best score 113 bits
Score difference with first non-orthologous sequence - E.histolytica:113 P.ramorum:49

C4M8B4              	100.00%		H3GNL3              	100.00%
                    	       		H3GWP6              	25.68%
                    	       		H3GHW4              	14.20%
                    	       		H3GRN2              	8.17%
Bootstrap support for C4M8B4 as seed ortholog is 100%.
Bootstrap support for H3GNL3 as seed ortholog is 87%.

Group of orthologs #809. Best score 113 bits
Score difference with first non-orthologous sequence - E.histolytica:51 P.ramorum:113

C4LXJ0              	100.00%		H3GES7              	100.00%
C4M4X7              	7.02%		
Bootstrap support for C4LXJ0 as seed ortholog is 93%.
Bootstrap support for H3GES7 as seed ortholog is 100%.

Group of orthologs #810. Best score 113 bits
Score difference with first non-orthologous sequence - E.histolytica:113 P.ramorum:66

C4M1B2              	100.00%		H3G754              	100.00%
Bootstrap support for C4M1B2 as seed ortholog is 100%.
Bootstrap support for H3G754 as seed ortholog is 99%.

Group of orthologs #811. Best score 113 bits
Score difference with first non-orthologous sequence - E.histolytica:113 P.ramorum:113

C4M4I7              	100.00%		H3HCT8              	100.00%
Bootstrap support for C4M4I7 as seed ortholog is 100%.
Bootstrap support for H3HCT8 as seed ortholog is 100%.

Group of orthologs #812. Best score 112 bits
Score difference with first non-orthologous sequence - E.histolytica:112 P.ramorum:112

C4M1E7              	100.00%		H3GN80              	100.00%
C4M0E4              	100.00%		H3GN83              	100.00%
C4LSP4              	28.31%		H3GN73              	58.71%
C4LU54              	19.56%		
Bootstrap support for C4M1E7 as seed ortholog is 100%.
Bootstrap support for C4M0E4 as seed ortholog is 100%.
Bootstrap support for H3GN80 as seed ortholog is 100%.
Bootstrap support for H3GN83 as seed ortholog is 100%.

Group of orthologs #813. Best score 112 bits
Score difference with first non-orthologous sequence - E.histolytica:112 P.ramorum:112

C4M7L0              	100.00%		H3GLH6              	100.00%
                    	       		H3H1D0              	19.44%
Bootstrap support for C4M7L0 as seed ortholog is 100%.
Bootstrap support for H3GLH6 as seed ortholog is 100%.

Group of orthologs #814. Best score 112 bits
Score difference with first non-orthologous sequence - E.histolytica:112 P.ramorum:112

C4M6S1              	100.00%		H3G548              	100.00%
Bootstrap support for C4M6S1 as seed ortholog is 100%.
Bootstrap support for H3G548 as seed ortholog is 100%.

Group of orthologs #815. Best score 111 bits
Score difference with first non-orthologous sequence - E.histolytica:111 P.ramorum:111

C4LZS2              	100.00%		H3G5I3              	100.00%
C4M123              	100.00%		
C4M7G9              	100.00%		
Bootstrap support for C4LZS2 as seed ortholog is 100%.
Bootstrap support for C4M123 as seed ortholog is 100%.
Bootstrap support for C4M7G9 as seed ortholog is 100%.
Bootstrap support for H3G5I3 as seed ortholog is 100%.

Group of orthologs #816. Best score 111 bits
Score difference with first non-orthologous sequence - E.histolytica:26 P.ramorum:111

C4M3Y3              	100.00%		H3GEI1              	100.00%
C4M7P5              	8.70%		
C4M6D9              	5.98%		
Bootstrap support for C4M3Y3 as seed ortholog is 73%.
Alternative seed ortholog is C4M0F1 (26 bits away from this cluster)
Bootstrap support for H3GEI1 as seed ortholog is 100%.

Group of orthologs #817. Best score 111 bits
Score difference with first non-orthologous sequence - E.histolytica:111 P.ramorum:111

C4LV22              	100.00%		H3GI10              	100.00%
C4M1M3              	9.76%		
Bootstrap support for C4LV22 as seed ortholog is 100%.
Bootstrap support for H3GI10 as seed ortholog is 100%.

Group of orthologs #818. Best score 111 bits
Score difference with first non-orthologous sequence - E.histolytica:111 P.ramorum:111

C4LVU3              	100.00%		H3GPB1              	100.00%
Bootstrap support for C4LVU3 as seed ortholog is 100%.
Bootstrap support for H3GPB1 as seed ortholog is 100%.

Group of orthologs #819. Best score 111 bits
Score difference with first non-orthologous sequence - E.histolytica:111 P.ramorum:111

C4M8G6              	100.00%		H3GCB9              	100.00%
Bootstrap support for C4M8G6 as seed ortholog is 100%.
Bootstrap support for H3GCB9 as seed ortholog is 100%.

Group of orthologs #820. Best score 111 bits
Score difference with first non-orthologous sequence - E.histolytica:111 P.ramorum:111

C4M9W4              	100.00%		H3GFF5              	100.00%
Bootstrap support for C4M9W4 as seed ortholog is 100%.
Bootstrap support for H3GFF5 as seed ortholog is 100%.

Group of orthologs #821. Best score 111 bits
Score difference with first non-orthologous sequence - E.histolytica:111 P.ramorum:111

C4LZD4              	100.00%		H3GSA3              	100.00%
Bootstrap support for C4LZD4 as seed ortholog is 100%.
Bootstrap support for H3GSA3 as seed ortholog is 100%.

Group of orthologs #822. Best score 111 bits
Score difference with first non-orthologous sequence - E.histolytica:111 P.ramorum:111

C4LWQ0              	100.00%		H3H1C0              	100.00%
Bootstrap support for C4LWQ0 as seed ortholog is 100%.
Bootstrap support for H3H1C0 as seed ortholog is 100%.

Group of orthologs #823. Best score 110 bits
Score difference with first non-orthologous sequence - E.histolytica:110 P.ramorum:110

C4LYK7              	100.00%		H3HD68              	100.00%
B1N328              	13.82%		
Bootstrap support for C4LYK7 as seed ortholog is 100%.
Bootstrap support for H3HD68 as seed ortholog is 100%.

Group of orthologs #824. Best score 110 bits
Score difference with first non-orthologous sequence - E.histolytica:110 P.ramorum:110

C4LSD9              	100.00%		H3GGU4              	100.00%
Bootstrap support for C4LSD9 as seed ortholog is 100%.
Bootstrap support for H3GGU4 as seed ortholog is 100%.

Group of orthologs #825. Best score 110 bits
Score difference with first non-orthologous sequence - E.histolytica:110 P.ramorum:110

C4M457              	100.00%		H3GH50              	100.00%
Bootstrap support for C4M457 as seed ortholog is 100%.
Bootstrap support for H3GH50 as seed ortholog is 100%.

Group of orthologs #826. Best score 109 bits
Score difference with first non-orthologous sequence - E.histolytica:109 P.ramorum:109

C4M0X0              	100.00%		H3G703              	100.00%
B1N601              	11.48%		
Bootstrap support for C4M0X0 as seed ortholog is 100%.
Bootstrap support for H3G703 as seed ortholog is 100%.

Group of orthologs #827. Best score 109 bits
Score difference with first non-orthologous sequence - E.histolytica:109 P.ramorum:109

C4LTY0              	100.00%		H3G715              	100.00%
Bootstrap support for C4LTY0 as seed ortholog is 100%.
Bootstrap support for H3G715 as seed ortholog is 100%.

Group of orthologs #828. Best score 109 bits
Score difference with first non-orthologous sequence - E.histolytica:109 P.ramorum:109

C4M0W5              	100.00%		H3G7D9              	100.00%
Bootstrap support for C4M0W5 as seed ortholog is 100%.
Bootstrap support for H3G7D9 as seed ortholog is 100%.

Group of orthologs #829. Best score 109 bits
Score difference with first non-orthologous sequence - E.histolytica:25 P.ramorum:109

C4M830              	100.00%		H3GCS1              	100.00%
Bootstrap support for C4M830 as seed ortholog is 65%.
Alternative seed ortholog is C4M9Y0 (25 bits away from this cluster)
Bootstrap support for H3GCS1 as seed ortholog is 100%.

Group of orthologs #830. Best score 109 bits
Score difference with first non-orthologous sequence - E.histolytica:109 P.ramorum:109

C4LX08              	100.00%		H3GS88              	100.00%
Bootstrap support for C4LX08 as seed ortholog is 100%.
Bootstrap support for H3GS88 as seed ortholog is 100%.

Group of orthologs #831. Best score 109 bits
Score difference with first non-orthologous sequence - E.histolytica:109 P.ramorum:109

C4M7F6              	100.00%		H3GIE0              	100.00%
Bootstrap support for C4M7F6 as seed ortholog is 100%.
Bootstrap support for H3GIE0 as seed ortholog is 100%.

Group of orthologs #832. Best score 109 bits
Score difference with first non-orthologous sequence - E.histolytica:109 P.ramorum:109

C4LW60              	100.00%		H3GX09              	100.00%
Bootstrap support for C4LW60 as seed ortholog is 100%.
Bootstrap support for H3GX09 as seed ortholog is 100%.

Group of orthologs #833. Best score 109 bits
Score difference with first non-orthologous sequence - E.histolytica:109 P.ramorum:109

C4LZ16              	100.00%		H3GWS0              	100.00%
Bootstrap support for C4LZ16 as seed ortholog is 100%.
Bootstrap support for H3GWS0 as seed ortholog is 100%.

Group of orthologs #834. Best score 108 bits
Score difference with first non-orthologous sequence - E.histolytica:108 P.ramorum:108

C4M8R8              	100.00%		H3G8S1              	100.00%
C4LVT2              	99.78%		
Bootstrap support for C4M8R8 as seed ortholog is 100%.
Bootstrap support for H3G8S1 as seed ortholog is 100%.

Group of orthologs #835. Best score 108 bits
Score difference with first non-orthologous sequence - E.histolytica:36 P.ramorum:108

B1N4N2              	100.00%		H3GYE2              	100.00%
C4LTQ2              	87.10%		
Bootstrap support for B1N4N2 as seed ortholog is 81%.
Bootstrap support for H3GYE2 as seed ortholog is 100%.

Group of orthologs #836. Best score 108 bits
Score difference with first non-orthologous sequence - E.histolytica:108 P.ramorum:108

C4LSX6              	100.00%		H3G6F4              	100.00%
Bootstrap support for C4LSX6 as seed ortholog is 100%.
Bootstrap support for H3G6F4 as seed ortholog is 100%.

Group of orthologs #837. Best score 108 bits
Score difference with first non-orthologous sequence - E.histolytica:108 P.ramorum:108

C4LX96              	100.00%		H3GHR0              	100.00%
Bootstrap support for C4LX96 as seed ortholog is 100%.
Bootstrap support for H3GHR0 as seed ortholog is 100%.

Group of orthologs #838. Best score 108 bits
Score difference with first non-orthologous sequence - E.histolytica:108 P.ramorum:108

C4M843              	100.00%		H3G7Q5              	100.00%
Bootstrap support for C4M843 as seed ortholog is 100%.
Bootstrap support for H3G7Q5 as seed ortholog is 100%.

Group of orthologs #839. Best score 108 bits
Score difference with first non-orthologous sequence - E.histolytica:108 P.ramorum:108

C4LXH0              	100.00%		H3GKU1              	100.00%
Bootstrap support for C4LXH0 as seed ortholog is 100%.
Bootstrap support for H3GKU1 as seed ortholog is 100%.

Group of orthologs #840. Best score 108 bits
Score difference with first non-orthologous sequence - E.histolytica:26 P.ramorum:17

C4LYP6              	100.00%		H3GTM4              	100.00%
Bootstrap support for C4LYP6 as seed ortholog is 73%.
Alternative seed ortholog is C4M7K1 (26 bits away from this cluster)
Bootstrap support for H3GTM4 as seed ortholog is 62%.
Alternative seed ortholog is H3GCL9 (17 bits away from this cluster)

Group of orthologs #841. Best score 107 bits
Score difference with first non-orthologous sequence - E.histolytica:107 P.ramorum:107

C4LW29              	100.00%		H3GIC1              	100.00%
C4M0Y8              	12.39%		H3GV91              	21.60%
C4M543              	12.33%		
C4M164              	5.50%		
C4M4B4              	5.21%		
C4LSK8              	5.16%		
Bootstrap support for C4LW29 as seed ortholog is 100%.
Bootstrap support for H3GIC1 as seed ortholog is 100%.

Group of orthologs #842. Best score 107 bits
Score difference with first non-orthologous sequence - E.histolytica:107 P.ramorum:107

C4LTB6              	100.00%		H3G748              	100.00%
                    	       		H3G5V0              	55.02%
                    	       		H3G749              	38.86%
Bootstrap support for C4LTB6 as seed ortholog is 100%.
Bootstrap support for H3G748 as seed ortholog is 100%.

Group of orthologs #843. Best score 107 bits
Score difference with first non-orthologous sequence - E.histolytica:107 P.ramorum:107

B1N2J0              	100.00%		H3GFN8              	100.00%
Q9NH04              	100.00%		
Bootstrap support for B1N2J0 as seed ortholog is 100%.
Bootstrap support for Q9NH04 as seed ortholog is 100%.
Bootstrap support for H3GFN8 as seed ortholog is 100%.

Group of orthologs #844. Best score 107 bits
Score difference with first non-orthologous sequence - E.histolytica:107 P.ramorum:20

B1N4F4              	100.00%		H3G956              	100.00%
Bootstrap support for B1N4F4 as seed ortholog is 100%.
Bootstrap support for H3G956 as seed ortholog is 51%.
Alternative seed ortholog is H3G6E7 (20 bits away from this cluster)

Group of orthologs #845. Best score 107 bits
Score difference with first non-orthologous sequence - E.histolytica:20 P.ramorum:107

C4LXR1              	100.00%		H3GHR3              	100.00%
Bootstrap support for C4LXR1 as seed ortholog is 71%.
Alternative seed ortholog is C4M5C4 (20 bits away from this cluster)
Bootstrap support for H3GHR3 as seed ortholog is 100%.

Group of orthologs #846. Best score 107 bits
Score difference with first non-orthologous sequence - E.histolytica:107 P.ramorum:107

C4M9V2              	100.00%		H3GP76              	100.00%
Bootstrap support for C4M9V2 as seed ortholog is 100%.
Bootstrap support for H3GP76 as seed ortholog is 100%.

Group of orthologs #847. Best score 107 bits
Score difference with first non-orthologous sequence - E.histolytica:107 P.ramorum:107

C4M1V1              	100.00%		H3H0V6              	100.00%
Bootstrap support for C4M1V1 as seed ortholog is 100%.
Bootstrap support for H3H0V6 as seed ortholog is 100%.

Group of orthologs #848. Best score 106 bits
Score difference with first non-orthologous sequence - E.histolytica:12 P.ramorum:106

C4M0Q6              	100.00%		H3GE06              	100.00%
C4M207              	7.32%		
C4LUI2              	5.53%		
C4M3A4              	5.20%		
Bootstrap support for C4M0Q6 as seed ortholog is 64%.
Alternative seed ortholog is C4LYU1 (12 bits away from this cluster)
Bootstrap support for H3GE06 as seed ortholog is 100%.

Group of orthologs #849. Best score 106 bits
Score difference with first non-orthologous sequence - E.histolytica:106 P.ramorum:61

C4M1U6              	100.00%		H3GIJ0              	100.00%
                    	       		H3GT88              	100.00%
                    	       		H3GTD0              	23.90%
                    	       		H3GT89              	9.19%
Bootstrap support for C4M1U6 as seed ortholog is 100%.
Bootstrap support for H3GIJ0 as seed ortholog is 99%.
Bootstrap support for H3GT88 as seed ortholog is 99%.

Group of orthologs #850. Best score 106 bits
Score difference with first non-orthologous sequence - E.histolytica:106 P.ramorum:106

C4LSH3              	100.00%		H3GUE2              	100.00%
C4M6Q0              	23.27%		H3GLH0              	5.04%
Bootstrap support for C4LSH3 as seed ortholog is 100%.
Bootstrap support for H3GUE2 as seed ortholog is 100%.

Group of orthologs #851. Best score 106 bits
Score difference with first non-orthologous sequence - E.histolytica:106 P.ramorum:106

C4LY23              	100.00%		H3GLL0              	100.00%
B1N3A5              	46.85%		
Bootstrap support for C4LY23 as seed ortholog is 100%.
Bootstrap support for H3GLL0 as seed ortholog is 100%.

Group of orthologs #852. Best score 106 bits
Score difference with first non-orthologous sequence - E.histolytica:106 P.ramorum:106

C4LZL6              	100.00%		H3GZL1              	100.00%
C4M6H6              	100.00%		
Bootstrap support for C4LZL6 as seed ortholog is 100%.
Bootstrap support for C4M6H6 as seed ortholog is 100%.
Bootstrap support for H3GZL1 as seed ortholog is 100%.

Group of orthologs #853. Best score 106 bits
Score difference with first non-orthologous sequence - E.histolytica:106 P.ramorum:106

C4LSG7              	100.00%		H3GQH7              	100.00%
Bootstrap support for C4LSG7 as seed ortholog is 100%.
Bootstrap support for H3GQH7 as seed ortholog is 100%.

Group of orthologs #854. Best score 106 bits
Score difference with first non-orthologous sequence - E.histolytica:106 P.ramorum:106

C4M913              	100.00%		H3GHZ3              	100.00%
Bootstrap support for C4M913 as seed ortholog is 100%.
Bootstrap support for H3GHZ3 as seed ortholog is 100%.

Group of orthologs #855. Best score 105 bits
Score difference with first non-orthologous sequence - E.histolytica:105 P.ramorum:35

B1N4Q5              	100.00%		H3G8V4              	100.00%
Bootstrap support for B1N4Q5 as seed ortholog is 100%.
Bootstrap support for H3G8V4 as seed ortholog is 81%.

Group of orthologs #856. Best score 105 bits
Score difference with first non-orthologous sequence - E.histolytica:105 P.ramorum:105

B1N4V3              	100.00%		H3G9D5              	100.00%
Bootstrap support for B1N4V3 as seed ortholog is 100%.
Bootstrap support for H3G9D5 as seed ortholog is 100%.

Group of orthologs #857. Best score 105 bits
Score difference with first non-orthologous sequence - E.histolytica:105 P.ramorum:105

C4M9T8              	100.00%		H3G531              	100.00%
Bootstrap support for C4M9T8 as seed ortholog is 100%.
Bootstrap support for H3G531 as seed ortholog is 100%.

Group of orthologs #858. Best score 105 bits
Score difference with first non-orthologous sequence - E.histolytica:105 P.ramorum:105

C4M4X2              	100.00%		H3GUX3              	100.00%
Bootstrap support for C4M4X2 as seed ortholog is 100%.
Bootstrap support for H3GUX3 as seed ortholog is 100%.

Group of orthologs #859. Best score 104 bits
Score difference with first non-orthologous sequence - E.histolytica:104 P.ramorum:104

C4M635              	100.00%		H3GU94              	100.00%
C4M935              	25.38%		H3GI50              	15.06%
C4LZX6              	24.74%		H3GVQ7              	14.10%
C4M6P3              	9.67%		H3GU95              	12.43%
Bootstrap support for C4M635 as seed ortholog is 100%.
Bootstrap support for H3GU94 as seed ortholog is 100%.

Group of orthologs #860. Best score 104 bits
Score difference with first non-orthologous sequence - E.histolytica:104 P.ramorum:104

C4M1D9              	100.00%		H3GXL0              	100.00%
C4LZR1              	14.14%		
C4LZ79              	9.13%		
C4M216              	8.23%		
C4M7F4              	5.01%		
Bootstrap support for C4M1D9 as seed ortholog is 100%.
Bootstrap support for H3GXL0 as seed ortholog is 100%.

Group of orthologs #861. Best score 104 bits
Score difference with first non-orthologous sequence - E.histolytica:43 P.ramorum:59

C4LT43              	100.00%		H3GK11              	100.00%
Q1EQ05              	100.00%		H3HB48              	19.96%
Bootstrap support for C4LT43 as seed ortholog is 92%.
Bootstrap support for Q1EQ05 as seed ortholog is 94%.
Bootstrap support for H3GK11 as seed ortholog is 98%.

Group of orthologs #862. Best score 104 bits
Score difference with first non-orthologous sequence - E.histolytica:104 P.ramorum:104

C4M181              	100.00%		H3GJS2              	100.00%
                    	       		H3GQ99              	8.53%
Bootstrap support for C4M181 as seed ortholog is 100%.
Bootstrap support for H3GJS2 as seed ortholog is 100%.

Group of orthologs #863. Best score 104 bits
Score difference with first non-orthologous sequence - E.histolytica:104 P.ramorum:52

C4LYI2              	100.00%		H3G7L6              	100.00%
Bootstrap support for C4LYI2 as seed ortholog is 100%.
Bootstrap support for H3G7L6 as seed ortholog is 99%.

Group of orthologs #864. Best score 104 bits
Score difference with first non-orthologous sequence - E.histolytica:104 P.ramorum:104

C4LYD1              	100.00%		H3G8L4              	100.00%
Bootstrap support for C4LYD1 as seed ortholog is 100%.
Bootstrap support for H3G8L4 as seed ortholog is 100%.

Group of orthologs #865. Best score 104 bits
Score difference with first non-orthologous sequence - E.histolytica:59 P.ramorum:104

C4M5I7              	100.00%		H3GLQ1              	100.00%
Bootstrap support for C4M5I7 as seed ortholog is 87%.
Bootstrap support for H3GLQ1 as seed ortholog is 100%.

Group of orthologs #866. Best score 104 bits
Score difference with first non-orthologous sequence - E.histolytica:104 P.ramorum:104

C4MBA0              	100.00%		H3GS67              	100.00%
Bootstrap support for C4MBA0 as seed ortholog is 100%.
Bootstrap support for H3GS67 as seed ortholog is 100%.

Group of orthologs #867. Best score 104 bits
Score difference with first non-orthologous sequence - E.histolytica:104 P.ramorum:104

C4LV83              	100.00%		H3HBL5              	100.00%
Bootstrap support for C4LV83 as seed ortholog is 100%.
Bootstrap support for H3HBL5 as seed ortholog is 100%.

Group of orthologs #868. Best score 104 bits
Score difference with first non-orthologous sequence - E.histolytica:104 P.ramorum:104

Q9U7F6              	100.00%		H3GZZ0              	100.00%
Bootstrap support for Q9U7F6 as seed ortholog is 100%.
Bootstrap support for H3GZZ0 as seed ortholog is 100%.

Group of orthologs #869. Best score 103 bits
Score difference with first non-orthologous sequence - E.histolytica:103 P.ramorum:103

C4LUX9              	100.00%		H3G6F0              	100.00%
Bootstrap support for C4LUX9 as seed ortholog is 100%.
Bootstrap support for H3G6F0 as seed ortholog is 100%.

Group of orthologs #870. Best score 103 bits
Score difference with first non-orthologous sequence - E.histolytica:103 P.ramorum:103

C4M750              	100.00%		H3G9Z9              	100.00%
Bootstrap support for C4M750 as seed ortholog is 100%.
Bootstrap support for H3G9Z9 as seed ortholog is 100%.

Group of orthologs #871. Best score 103 bits
Score difference with first non-orthologous sequence - E.histolytica:103 P.ramorum:103

C4M1A5              	100.00%		H3H4G3              	100.00%
Bootstrap support for C4M1A5 as seed ortholog is 100%.
Bootstrap support for H3H4G3 as seed ortholog is 100%.

Group of orthologs #872. Best score 102 bits
Score difference with first non-orthologous sequence - E.histolytica:102 P.ramorum:11

C4LVQ9              	100.00%		H3G8N8              	100.00%
                    	       		H3G8W7              	100.00%
                    	       		H3GAI4              	9.05%
                    	       		H3G759              	6.32%
Bootstrap support for C4LVQ9 as seed ortholog is 100%.
Bootstrap support for H3G8N8 as seed ortholog is 64%.
Alternative seed ortholog is H3HCW2 (11 bits away from this cluster)
Bootstrap support for H3G8W7 as seed ortholog is 57%.
Alternative seed ortholog is H3HCW2 (11 bits away from this cluster)

Group of orthologs #873. Best score 102 bits
Score difference with first non-orthologous sequence - E.histolytica:102 P.ramorum:60

C4LYM6              	100.00%		H3G7H3              	100.00%
                    	       		H3G642              	12.84%
Bootstrap support for C4LYM6 as seed ortholog is 100%.
Bootstrap support for H3G7H3 as seed ortholog is 96%.

Group of orthologs #874. Best score 102 bits
Score difference with first non-orthologous sequence - E.histolytica:102 P.ramorum:102

C4M8A9              	100.00%		H3GA04              	100.00%
C4LU13              	86.67%		
Bootstrap support for C4M8A9 as seed ortholog is 100%.
Bootstrap support for H3GA04 as seed ortholog is 100%.

Group of orthologs #875. Best score 102 bits
Score difference with first non-orthologous sequence - E.histolytica:102 P.ramorum:102

C4LV37              	100.00%		H3HBK6              	100.00%
C4LV36              	40.76%		
Bootstrap support for C4LV37 as seed ortholog is 100%.
Bootstrap support for H3HBK6 as seed ortholog is 100%.

Group of orthologs #876. Best score 102 bits
Score difference with first non-orthologous sequence - E.histolytica:59 P.ramorum:15

C4M3V1              	100.00%		H3G542              	100.00%
Bootstrap support for C4M3V1 as seed ortholog is 100%.
Bootstrap support for H3G542 as seed ortholog is 87%.

Group of orthologs #877. Best score 102 bits
Score difference with first non-orthologous sequence - E.histolytica:15 P.ramorum:102

C4LV95              	100.00%		H3GMU6              	100.00%
Bootstrap support for C4LV95 as seed ortholog is 79%.
Bootstrap support for H3GMU6 as seed ortholog is 100%.

Group of orthologs #878. Best score 102 bits
Score difference with first non-orthologous sequence - E.histolytica:102 P.ramorum:102

Q5MAR2              	100.00%		H3G8R6              	100.00%
Bootstrap support for Q5MAR2 as seed ortholog is 100%.
Bootstrap support for H3G8R6 as seed ortholog is 100%.

Group of orthologs #879. Best score 102 bits
Score difference with first non-orthologous sequence - E.histolytica:102 P.ramorum:102

B1N5U3              	100.00%		H3H6X9              	100.00%
Bootstrap support for B1N5U3 as seed ortholog is 100%.
Bootstrap support for H3H6X9 as seed ortholog is 100%.

Group of orthologs #880. Best score 102 bits
Score difference with first non-orthologous sequence - E.histolytica:102 P.ramorum:102

C4M6Z8              	100.00%		H3HE74              	100.00%
Bootstrap support for C4M6Z8 as seed ortholog is 100%.
Bootstrap support for H3HE74 as seed ortholog is 100%.

Group of orthologs #881. Best score 101 bits
Score difference with first non-orthologous sequence - E.histolytica:101 P.ramorum:58

C4M5F1              	100.00%		H3H2J5              	100.00%
C4M6Z3              	11.13%		
C4LXY9              	9.40%		
Bootstrap support for C4M5F1 as seed ortholog is 100%.
Bootstrap support for H3H2J5 as seed ortholog is 90%.

Group of orthologs #882. Best score 101 bits
Score difference with first non-orthologous sequence - E.histolytica:101 P.ramorum:101

C4M9E7              	100.00%		H3H143              	100.00%
C4LY56              	55.02%		
Bootstrap support for C4M9E7 as seed ortholog is 100%.
Bootstrap support for H3H143 as seed ortholog is 100%.

Group of orthologs #883. Best score 101 bits
Score difference with first non-orthologous sequence - E.histolytica:101 P.ramorum:101

C4M365              	100.00%		H3HC47              	100.00%
B1N628              	22.83%		
Bootstrap support for C4M365 as seed ortholog is 100%.
Bootstrap support for H3HC47 as seed ortholog is 100%.

Group of orthologs #884. Best score 100 bits
Score difference with first non-orthologous sequence - E.histolytica:100 P.ramorum:100

C4M6X4              	100.00%		H3GL40              	100.00%
C4LSU9              	9.26%		
C4LVC3              	7.67%		
Bootstrap support for C4M6X4 as seed ortholog is 100%.
Bootstrap support for H3GL40 as seed ortholog is 100%.

Group of orthologs #885. Best score 99 bits
Score difference with first non-orthologous sequence - E.histolytica:22 P.ramorum:99

C4M4A3              	100.00%		H3G911              	100.00%
C4LTN2              	14.94%		H3GU00              	16.22%
C4LV42              	6.22%		
C4M4P1              	5.81%		
Bootstrap support for C4M4A3 as seed ortholog is 85%.
Bootstrap support for H3G911 as seed ortholog is 100%.

Group of orthologs #886. Best score 99 bits
Score difference with first non-orthologous sequence - E.histolytica:99 P.ramorum:99

C4M8I1              	100.00%		H3H1L0              	100.00%
C4LYC2              	26.79%		H3H867              	70.14%
Bootstrap support for C4M8I1 as seed ortholog is 100%.
Bootstrap support for H3H1L0 as seed ortholog is 100%.

Group of orthologs #887. Best score 99 bits
Score difference with first non-orthologous sequence - E.histolytica:99 P.ramorum:99

C4LWC2              	100.00%		H3GD51              	100.00%
C4M932              	100.00%		
Bootstrap support for C4LWC2 as seed ortholog is 100%.
Bootstrap support for C4M932 as seed ortholog is 100%.
Bootstrap support for H3GD51 as seed ortholog is 100%.

Group of orthologs #888. Best score 99 bits
Score difference with first non-orthologous sequence - E.histolytica:99 P.ramorum:99

C4LSB4              	100.00%		H3GIL9              	100.00%
Bootstrap support for C4LSB4 as seed ortholog is 100%.
Bootstrap support for H3GIL9 as seed ortholog is 100%.

Group of orthologs #889. Best score 99 bits
Score difference with first non-orthologous sequence - E.histolytica:99 P.ramorum:99

C4MA24              	100.00%		H3G881              	100.00%
Bootstrap support for C4MA24 as seed ortholog is 100%.
Bootstrap support for H3G881 as seed ortholog is 100%.

Group of orthologs #890. Best score 99 bits
Score difference with first non-orthologous sequence - E.histolytica:2 P.ramorum:99

Q1EQ10              	100.00%		H3G941              	100.00%
Bootstrap support for Q1EQ10 as seed ortholog is 55%.
Alternative seed ortholog is Q1EQ13 (2 bits away from this cluster)
Bootstrap support for H3G941 as seed ortholog is 100%.

Group of orthologs #891. Best score 99 bits
Score difference with first non-orthologous sequence - E.histolytica:99 P.ramorum:99

C4M7T5              	100.00%		H3GWU4              	100.00%
Bootstrap support for C4M7T5 as seed ortholog is 100%.
Bootstrap support for H3GWU4 as seed ortholog is 100%.

Group of orthologs #892. Best score 99 bits
Score difference with first non-orthologous sequence - E.histolytica:99 P.ramorum:99

C4M666              	100.00%		H3H0F3              	100.00%
Bootstrap support for C4M666 as seed ortholog is 100%.
Bootstrap support for H3H0F3 as seed ortholog is 100%.

Group of orthologs #893. Best score 98 bits
Score difference with first non-orthologous sequence - E.histolytica:98 P.ramorum:98

C4M8V3              	100.00%		H3GBG6              	100.00%
C4M1G8              	19.55%		
Bootstrap support for C4M8V3 as seed ortholog is 100%.
Bootstrap support for H3GBG6 as seed ortholog is 100%.

Group of orthologs #894. Best score 98 bits
Score difference with first non-orthologous sequence - E.histolytica:98 P.ramorum:98

C4M6Y0              	100.00%		H3GZX6              	100.00%
Bootstrap support for C4M6Y0 as seed ortholog is 100%.
Bootstrap support for H3GZX6 as seed ortholog is 100%.

Group of orthologs #895. Best score 97 bits
Score difference with first non-orthologous sequence - E.histolytica:97 P.ramorum:97

C4LVV3              	100.00%		H3GQW3              	100.00%
C4MA52              	25.19%		
C4LYZ5              	8.82%		
C4M8T6              	5.16%		
C4M962              	5.04%		
Bootstrap support for C4LVV3 as seed ortholog is 100%.
Bootstrap support for H3GQW3 as seed ortholog is 100%.

Group of orthologs #896. Best score 97 bits
Score difference with first non-orthologous sequence - E.histolytica:16 P.ramorum:97

C4LYI4              	100.00%		H3GES9              	100.00%
                    	       		H3GV37              	15.74%
                    	       		H3GKT3              	11.03%
                    	       		H3H0W8              	5.48%
Bootstrap support for C4LYI4 as seed ortholog is 57%.
Alternative seed ortholog is C4LZN3 (16 bits away from this cluster)
Bootstrap support for H3GES9 as seed ortholog is 100%.

Group of orthologs #897. Best score 97 bits
Score difference with first non-orthologous sequence - E.histolytica:97 P.ramorum:97

C4LSR1              	100.00%		H3G5Z9              	100.00%
C4LYP4              	77.23%		
C4LT66              	76.24%		
Bootstrap support for C4LSR1 as seed ortholog is 100%.
Bootstrap support for H3G5Z9 as seed ortholog is 100%.

Group of orthologs #898. Best score 97 bits
Score difference with first non-orthologous sequence - E.histolytica:10 P.ramorum:17

C4LU68              	100.00%		H3G511              	100.00%
Bootstrap support for C4LU68 as seed ortholog is 66%.
Alternative seed ortholog is C4M2W8 (10 bits away from this cluster)
Bootstrap support for H3G511 as seed ortholog is 79%.

Group of orthologs #899. Best score 97 bits
Score difference with first non-orthologous sequence - E.histolytica:97 P.ramorum:97

C4M0Z6              	100.00%		H3G666              	100.00%
Bootstrap support for C4M0Z6 as seed ortholog is 100%.
Bootstrap support for H3G666 as seed ortholog is 100%.

Group of orthologs #900. Best score 97 bits
Score difference with first non-orthologous sequence - E.histolytica:97 P.ramorum:97

C4LXI0              	100.00%		H3GD54              	100.00%
Bootstrap support for C4LXI0 as seed ortholog is 100%.
Bootstrap support for H3GD54 as seed ortholog is 100%.

Group of orthologs #901. Best score 97 bits
Score difference with first non-orthologous sequence - E.histolytica:97 P.ramorum:97

C4M5M8              	100.00%		H3G6S7              	100.00%
Bootstrap support for C4M5M8 as seed ortholog is 100%.
Bootstrap support for H3G6S7 as seed ortholog is 100%.

Group of orthologs #902. Best score 97 bits
Score difference with first non-orthologous sequence - E.histolytica:97 P.ramorum:97

C4M5J9              	100.00%		H3GAA6              	100.00%
Bootstrap support for C4M5J9 as seed ortholog is 100%.
Bootstrap support for H3GAA6 as seed ortholog is 100%.

Group of orthologs #903. Best score 97 bits
Score difference with first non-orthologous sequence - E.histolytica:97 P.ramorum:97

C4LXB4              	100.00%		H3GVK2              	100.00%
Bootstrap support for C4LXB4 as seed ortholog is 100%.
Bootstrap support for H3GVK2 as seed ortholog is 100%.

Group of orthologs #904. Best score 97 bits
Score difference with first non-orthologous sequence - E.histolytica:97 P.ramorum:97

C4LZG2              	100.00%		H3GXK1              	100.00%
Bootstrap support for C4LZG2 as seed ortholog is 100%.
Bootstrap support for H3GXK1 as seed ortholog is 100%.

Group of orthologs #905. Best score 97 bits
Score difference with first non-orthologous sequence - E.histolytica:97 P.ramorum:97

C4LVP4              	100.00%		H3H3Q9              	100.00%
Bootstrap support for C4LVP4 as seed ortholog is 100%.
Bootstrap support for H3H3Q9 as seed ortholog is 100%.

Group of orthologs #906. Best score 96 bits
Score difference with first non-orthologous sequence - E.histolytica:96 P.ramorum:96

C4M153              	100.00%		H3H2M2              	100.00%
                    	       		H3GVM8              	89.07%
Bootstrap support for C4M153 as seed ortholog is 100%.
Bootstrap support for H3H2M2 as seed ortholog is 100%.

Group of orthologs #907. Best score 96 bits
Score difference with first non-orthologous sequence - E.histolytica:96 P.ramorum:96

C4LTV1              	100.00%		H3GEB9              	100.00%
Bootstrap support for C4LTV1 as seed ortholog is 100%.
Bootstrap support for H3GEB9 as seed ortholog is 100%.

Group of orthologs #908. Best score 96 bits
Score difference with first non-orthologous sequence - E.histolytica:52 P.ramorum:96

C4M633              	100.00%		H3HA50              	100.00%
Bootstrap support for C4M633 as seed ortholog is 92%.
Bootstrap support for H3HA50 as seed ortholog is 100%.

Group of orthologs #909. Best score 95 bits
Score difference with first non-orthologous sequence - E.histolytica:95 P.ramorum:95

C4LU87              	100.00%		H3G8N1              	100.00%
                    	       		H3GX99              	5.43%
Bootstrap support for C4LU87 as seed ortholog is 100%.
Bootstrap support for H3G8N1 as seed ortholog is 100%.

Group of orthologs #910. Best score 95 bits
Score difference with first non-orthologous sequence - E.histolytica:95 P.ramorum:95

C4LV75              	100.00%		H3G9Z2              	100.00%
                    	       		H3GA01              	100.00%
Bootstrap support for C4LV75 as seed ortholog is 100%.
Bootstrap support for H3G9Z2 as seed ortholog is 100%.
Bootstrap support for H3GA01 as seed ortholog is 100%.

Group of orthologs #911. Best score 95 bits
Score difference with first non-orthologous sequence - E.histolytica:15 P.ramorum:95

C4M6B6              	100.00%		H3GHD8              	100.00%
C4M956              	41.00%		
Bootstrap support for C4M6B6 as seed ortholog is 64%.
Alternative seed ortholog is C4M657 (15 bits away from this cluster)
Bootstrap support for H3GHD8 as seed ortholog is 100%.

Group of orthologs #912. Best score 95 bits
Score difference with first non-orthologous sequence - E.histolytica:95 P.ramorum:95

C4M765              	100.00%		H3GML8              	100.00%
B1N568              	65.35%		
Bootstrap support for C4M765 as seed ortholog is 100%.
Bootstrap support for H3GML8 as seed ortholog is 100%.

Group of orthologs #913. Best score 95 bits
Score difference with first non-orthologous sequence - E.histolytica:95 P.ramorum:95

C4MB46              	100.00%		H3G946              	100.00%
Bootstrap support for C4MB46 as seed ortholog is 100%.
Bootstrap support for H3G946 as seed ortholog is 100%.

Group of orthologs #914. Best score 95 bits
Score difference with first non-orthologous sequence - E.histolytica:43 P.ramorum:95

C4M6L8              	100.00%		H3GET8              	100.00%
Bootstrap support for C4M6L8 as seed ortholog is 82%.
Bootstrap support for H3GET8 as seed ortholog is 100%.

Group of orthologs #915. Best score 95 bits
Score difference with first non-orthologous sequence - E.histolytica:22 P.ramorum:95

C4M1Q2              	100.00%		H3H248              	100.00%
Bootstrap support for C4M1Q2 as seed ortholog is 92%.
Bootstrap support for H3H248 as seed ortholog is 100%.

Group of orthologs #916. Best score 94 bits
Score difference with first non-orthologous sequence - E.histolytica:94 P.ramorum:94

C4M6S2              	100.00%		H3GDP2              	100.00%
C4M8C9              	99.40%		
C4LTQ0              	82.63%		
Bootstrap support for C4M6S2 as seed ortholog is 100%.
Bootstrap support for H3GDP2 as seed ortholog is 100%.

Group of orthologs #917. Best score 94 bits
Score difference with first non-orthologous sequence - E.histolytica:16 P.ramorum:94

C4M7Y6              	100.00%		H3GMU8              	100.00%
                    	       		H3GDY8              	17.40%
Bootstrap support for C4M7Y6 as seed ortholog is 69%.
Alternative seed ortholog is C4LXY8 (16 bits away from this cluster)
Bootstrap support for H3GMU8 as seed ortholog is 100%.

Group of orthologs #918. Best score 94 bits
Score difference with first non-orthologous sequence - E.histolytica:44 P.ramorum:94

C4LTQ7              	100.00%		H3G9I0              	100.00%
Bootstrap support for C4LTQ7 as seed ortholog is 96%.
Bootstrap support for H3G9I0 as seed ortholog is 100%.

Group of orthologs #919. Best score 94 bits
Score difference with first non-orthologous sequence - E.histolytica:94 P.ramorum:94

C4LTQ6              	100.00%		H3GHM6              	100.00%
Bootstrap support for C4LTQ6 as seed ortholog is 100%.
Bootstrap support for H3GHM6 as seed ortholog is 100%.

Group of orthologs #920. Best score 94 bits
Score difference with first non-orthologous sequence - E.histolytica:94 P.ramorum:94

C4LWY3              	100.00%		H3GLG9              	100.00%
Bootstrap support for C4LWY3 as seed ortholog is 100%.
Bootstrap support for H3GLG9 as seed ortholog is 100%.

Group of orthologs #921. Best score 94 bits
Score difference with first non-orthologous sequence - E.histolytica:94 P.ramorum:94

C4LZA9              	100.00%		H3GX87              	100.00%
Bootstrap support for C4LZA9 as seed ortholog is 100%.
Bootstrap support for H3GX87 as seed ortholog is 100%.

Group of orthologs #922. Best score 93 bits
Score difference with first non-orthologous sequence - E.histolytica:93 P.ramorum:93

C4MB00              	100.00%		H3GG37              	100.00%
C4M0I3              	47.45%		
C4M5X2              	23.47%		
C4M985              	19.64%		
C4M210              	14.80%		
C4LZI1              	7.91%		
Bootstrap support for C4MB00 as seed ortholog is 100%.
Bootstrap support for H3GG37 as seed ortholog is 100%.

Group of orthologs #923. Best score 93 bits
Score difference with first non-orthologous sequence - E.histolytica:93 P.ramorum:93

C4M562              	100.00%		H3GK14              	100.00%
Bootstrap support for C4M562 as seed ortholog is 100%.
Bootstrap support for H3GK14 as seed ortholog is 100%.

Group of orthologs #924. Best score 92 bits
Score difference with first non-orthologous sequence - E.histolytica:92 P.ramorum:92

C4M423              	100.00%		H3GM05              	100.00%
C4LYM9              	56.20%		H3GLZ9              	55.56%
C4LT25              	50.84%		H3GID8              	31.26%
C4LVF1              	50.65%		H3GIC4              	19.18%
C4M420              	43.80%		H3GD16              	14.06%
C4M700              	43.29%		H3GW28              	13.38%
C4M6T0              	31.45%		H3HBL8              	13.11%
C4M980              	26.65%		H3GC07              	11.47%
                    	       		H3GC05              	10.03%
                    	       		H3GIU6              	9.97%
                    	       		H3GHC4              	5.39%
Bootstrap support for C4M423 as seed ortholog is 100%.
Bootstrap support for H3GM05 as seed ortholog is 100%.

Group of orthologs #925. Best score 92 bits
Score difference with first non-orthologous sequence - E.histolytica:10 P.ramorum:92

C4LSX7              	100.00%		H3HDI7              	100.00%
C4M9Y6              	14.48%		H3G600              	25.10%
                    	       		H3GY42              	13.23%
Bootstrap support for C4LSX7 as seed ortholog is 59%.
Alternative seed ortholog is C4M6C7 (10 bits away from this cluster)
Bootstrap support for H3HDI7 as seed ortholog is 100%.

Group of orthologs #926. Best score 92 bits
Score difference with first non-orthologous sequence - E.histolytica:1 P.ramorum:92

C4M322              	100.00%		H3G8F1              	100.00%
C4M645              	10.33%		H3GFT8              	8.65%
Bootstrap support for C4M322 as seed ortholog is 46%.
Alternative seed ortholog is C4M1U4 (1 bits away from this cluster)
Bootstrap support for H3G8F1 as seed ortholog is 100%.

Group of orthologs #927. Best score 92 bits
Score difference with first non-orthologous sequence - E.histolytica:92 P.ramorum:92

C4M727              	100.00%		H3GNV2              	100.00%
C4M9C4              	96.67%		
Bootstrap support for C4M727 as seed ortholog is 100%.
Bootstrap support for H3GNV2 as seed ortholog is 100%.

Group of orthologs #928. Best score 92 bits
Score difference with first non-orthologous sequence - E.histolytica:92 P.ramorum:92

C4M2M6              	100.00%		H3HD08              	100.00%
C4LSM3              	30.48%		
Bootstrap support for C4M2M6 as seed ortholog is 100%.
Bootstrap support for H3HD08 as seed ortholog is 100%.

Group of orthologs #929. Best score 92 bits
Score difference with first non-orthologous sequence - E.histolytica:92 P.ramorum:43

C4M4C7              	100.00%		H3G6M7              	100.00%
Bootstrap support for C4M4C7 as seed ortholog is 100%.
Bootstrap support for H3G6M7 as seed ortholog is 99%.

Group of orthologs #930. Best score 92 bits
Score difference with first non-orthologous sequence - E.histolytica:92 P.ramorum:92

C4M510              	100.00%		H3GGL5              	100.00%
Bootstrap support for C4M510 as seed ortholog is 100%.
Bootstrap support for H3GGL5 as seed ortholog is 100%.

Group of orthologs #931. Best score 92 bits
Score difference with first non-orthologous sequence - E.histolytica:92 P.ramorum:92

C4LSA0              	100.00%		H3HCV1              	100.00%
Bootstrap support for C4LSA0 as seed ortholog is 100%.
Bootstrap support for H3HCV1 as seed ortholog is 100%.

Group of orthologs #932. Best score 91 bits
Score difference with first non-orthologous sequence - E.histolytica:91 P.ramorum:91

C4LSD6              	100.00%		H3GMK6              	100.00%
C4MA32              	12.15%		H3GML3              	52.34%
C4M0S2              	5.52%		H3HC80              	51.77%
C4M099              	5.15%		H3GUG0              	50.74%
                    	       		H3GMK5              	50.51%
                    	       		H3H4Y7              	50.51%
                    	       		H3GDE9              	50.06%
                    	       		H3GUF9              	49.94%
                    	       		H3HC77              	47.31%
Bootstrap support for C4LSD6 as seed ortholog is 100%.
Bootstrap support for H3GMK6 as seed ortholog is 100%.

Group of orthologs #933. Best score 91 bits
Score difference with first non-orthologous sequence - E.histolytica:29 P.ramorum:91

C4M3D8              	100.00%		H3GY74              	100.00%
C4M0W8              	40.54%		
C4LXG8              	14.41%		
Bootstrap support for C4M3D8 as seed ortholog is 87%.
Bootstrap support for H3GY74 as seed ortholog is 100%.

Group of orthologs #934. Best score 91 bits
Score difference with first non-orthologous sequence - E.histolytica:91 P.ramorum:91

C4LXD7              	100.00%		H3G9S8              	100.00%
Bootstrap support for C4LXD7 as seed ortholog is 100%.
Bootstrap support for H3G9S8 as seed ortholog is 100%.

Group of orthologs #935. Best score 91 bits
Score difference with first non-orthologous sequence - E.histolytica:91 P.ramorum:91

C4M5G6              	100.00%		H3GNM1              	100.00%
Bootstrap support for C4M5G6 as seed ortholog is 100%.
Bootstrap support for H3GNM1 as seed ortholog is 100%.

Group of orthologs #936. Best score 91 bits
Score difference with first non-orthologous sequence - E.histolytica:91 P.ramorum:91

C4LWM2              	100.00%		H3H255              	100.00%
Bootstrap support for C4LWM2 as seed ortholog is 100%.
Bootstrap support for H3H255 as seed ortholog is 100%.

Group of orthologs #937. Best score 91 bits
Score difference with first non-orthologous sequence - E.histolytica:91 P.ramorum:91

C4M276              	100.00%		H3H7K8              	100.00%
Bootstrap support for C4M276 as seed ortholog is 100%.
Bootstrap support for H3H7K8 as seed ortholog is 100%.

Group of orthologs #938. Best score 90 bits
Score difference with first non-orthologous sequence - E.histolytica:90 P.ramorum:90

C4M901              	100.00%		H3HAT2              	100.00%
C4MBH6              	17.21%		
Bootstrap support for C4M901 as seed ortholog is 100%.
Bootstrap support for H3HAT2 as seed ortholog is 100%.

Group of orthologs #939. Best score 90 bits
Score difference with first non-orthologous sequence - E.histolytica:90 P.ramorum:27

C4M187              	100.00%		H3G535              	100.00%
Bootstrap support for C4M187 as seed ortholog is 100%.
Bootstrap support for H3G535 as seed ortholog is 95%.

Group of orthologs #940. Best score 90 bits
Score difference with first non-orthologous sequence - E.histolytica:90 P.ramorum:90

C4M051              	100.00%		H3GH26              	100.00%
Bootstrap support for C4M051 as seed ortholog is 100%.
Bootstrap support for H3GH26 as seed ortholog is 100%.

Group of orthologs #941. Best score 90 bits
Score difference with first non-orthologous sequence - E.histolytica:10 P.ramorum:90

C4M8F5              	100.00%		H3GCM9              	100.00%
Bootstrap support for C4M8F5 as seed ortholog is 43%.
Alternative seed ortholog is C4MAH1 (10 bits away from this cluster)
Bootstrap support for H3GCM9 as seed ortholog is 100%.

Group of orthologs #942. Best score 89 bits
Score difference with first non-orthologous sequence - E.histolytica:89 P.ramorum:89

C4M045              	100.00%		H3GNG9              	100.00%
C4M1K0              	33.70%		
C4LY02              	17.19%		
C4M2A9              	16.92%		
C4M7V0              	16.92%		
C4M6K3              	14.44%		
C4M6B1              	13.34%		
C4M0C3              	12.24%		
C4M4L3              	12.10%		
B1N456              	8.53%		
Bootstrap support for C4M045 as seed ortholog is 100%.
Bootstrap support for H3GNG9 as seed ortholog is 100%.

Group of orthologs #943. Best score 89 bits
Score difference with first non-orthologous sequence - E.histolytica:25 P.ramorum:89

B1N449              	100.00%		H3H080              	100.00%
C4LTH7              	13.62%		H3H829              	99.50%
Bootstrap support for B1N449 as seed ortholog is 76%.
Bootstrap support for H3H080 as seed ortholog is 100%.

Group of orthologs #944. Best score 89 bits
Score difference with first non-orthologous sequence - E.histolytica:89 P.ramorum:89

C4LW50              	100.00%		H3GHQ5              	100.00%
Bootstrap support for C4LW50 as seed ortholog is 100%.
Bootstrap support for H3GHQ5 as seed ortholog is 100%.

Group of orthologs #945. Best score 89 bits
Score difference with first non-orthologous sequence - E.histolytica:89 P.ramorum:89

B1N2R6              	100.00%		H3GV69              	100.00%
Bootstrap support for B1N2R6 as seed ortholog is 100%.
Bootstrap support for H3GV69 as seed ortholog is 100%.

Group of orthologs #946. Best score 89 bits
Score difference with first non-orthologous sequence - E.histolytica:89 P.ramorum:89

C4M4G6              	100.00%		H3GGJ0              	100.00%
Bootstrap support for C4M4G6 as seed ortholog is 100%.
Bootstrap support for H3GGJ0 as seed ortholog is 100%.

Group of orthologs #947. Best score 89 bits
Score difference with first non-orthologous sequence - E.histolytica:89 P.ramorum:89

C4LVV5              	100.00%		H3GQ33              	100.00%
Bootstrap support for C4LVV5 as seed ortholog is 100%.
Bootstrap support for H3GQ33 as seed ortholog is 100%.

Group of orthologs #948. Best score 89 bits
Score difference with first non-orthologous sequence - E.histolytica:89 P.ramorum:89

C4M0B2              	100.00%		H3GQS8              	100.00%
Bootstrap support for C4M0B2 as seed ortholog is 100%.
Bootstrap support for H3GQS8 as seed ortholog is 100%.

Group of orthologs #949. Best score 88 bits
Score difference with first non-orthologous sequence - E.histolytica:88 P.ramorum:88

C4M5V0              	100.00%		H3G8D9              	100.00%
C4M7K9              	18.50%		
C4LZH6              	12.72%		
Bootstrap support for C4M5V0 as seed ortholog is 100%.
Bootstrap support for H3G8D9 as seed ortholog is 100%.

Group of orthologs #950. Best score 88 bits
Score difference with first non-orthologous sequence - E.histolytica:88 P.ramorum:88

C4LWX2              	100.00%		H3GHR7              	100.00%
Bootstrap support for C4LWX2 as seed ortholog is 100%.
Bootstrap support for H3GHR7 as seed ortholog is 100%.

Group of orthologs #951. Best score 88 bits
Score difference with first non-orthologous sequence - E.histolytica:88 P.ramorum:88

C4M450              	100.00%		H3GBU9              	100.00%
Bootstrap support for C4M450 as seed ortholog is 100%.
Bootstrap support for H3GBU9 as seed ortholog is 100%.

Group of orthologs #952. Best score 88 bits
Score difference with first non-orthologous sequence - E.histolytica:88 P.ramorum:88

C4M8F6              	100.00%		H3G8T9              	100.00%
Bootstrap support for C4M8F6 as seed ortholog is 100%.
Bootstrap support for H3G8T9 as seed ortholog is 100%.

Group of orthologs #953. Best score 87 bits
Score difference with first non-orthologous sequence - E.histolytica:87 P.ramorum:87

B1N4C2              	100.00%		H3G814              	100.00%
C4MBF9              	82.32%		H3G6Z4              	74.89%
B1N5N8              	74.41%		H3GGL0              	5.94%
C4LVN7              	72.30%		
B1N5L4              	65.96%		
C4LXA1              	59.89%		
C4MBR8              	27.97%		
Bootstrap support for B1N4C2 as seed ortholog is 100%.
Bootstrap support for H3G814 as seed ortholog is 100%.

Group of orthologs #954. Best score 87 bits
Score difference with first non-orthologous sequence - E.histolytica:87 P.ramorum:1

C4LSV9              	100.00%		H3GY93              	100.00%
C4MBG1              	37.68%		H3GWV7              	15.55%
Bootstrap support for C4LSV9 as seed ortholog is 100%.
Bootstrap support for H3GY93 as seed ortholog is 63%.
Alternative seed ortholog is H3G8K9 (1 bits away from this cluster)

Group of orthologs #955. Best score 87 bits
Score difference with first non-orthologous sequence - E.histolytica:20 P.ramorum:87

C4M067              	100.00%		H3GAT4              	100.00%
                    	       		H3GRQ1              	7.67%
Bootstrap support for C4M067 as seed ortholog is 68%.
Alternative seed ortholog is C4LUL8 (20 bits away from this cluster)
Bootstrap support for H3GAT4 as seed ortholog is 100%.

Group of orthologs #956. Best score 87 bits
Score difference with first non-orthologous sequence - E.histolytica:87 P.ramorum:87

C4M4Y2              	100.00%		H3GGK3              	100.00%
C4M6X1              	27.44%		
Bootstrap support for C4M4Y2 as seed ortholog is 100%.
Bootstrap support for H3GGK3 as seed ortholog is 100%.

Group of orthologs #957. Best score 87 bits
Score difference with first non-orthologous sequence - E.histolytica:87 P.ramorum:87

B1N2G0              	100.00%		H3GGY1              	100.00%
Bootstrap support for B1N2G0 as seed ortholog is 100%.
Bootstrap support for H3GGY1 as seed ortholog is 100%.

Group of orthologs #958. Best score 87 bits
Score difference with first non-orthologous sequence - E.histolytica:87 P.ramorum:87

C4LUX0              	100.00%		H3GEK8              	100.00%
Bootstrap support for C4LUX0 as seed ortholog is 100%.
Bootstrap support for H3GEK8 as seed ortholog is 100%.

Group of orthologs #959. Best score 87 bits
Score difference with first non-orthologous sequence - E.histolytica:87 P.ramorum:87

C4M0J3              	100.00%		H3GBV9              	100.00%
Bootstrap support for C4M0J3 as seed ortholog is 100%.
Bootstrap support for H3GBV9 as seed ortholog is 100%.

Group of orthologs #960. Best score 87 bits
Score difference with first non-orthologous sequence - E.histolytica:87 P.ramorum:5

C4M6C9              	100.00%		H3G991              	100.00%
Bootstrap support for C4M6C9 as seed ortholog is 100%.
Bootstrap support for H3G991 as seed ortholog is 40%.
Alternative seed ortholog is H3GVW1 (5 bits away from this cluster)

Group of orthologs #961. Best score 87 bits
Score difference with first non-orthologous sequence - E.histolytica:87 P.ramorum:87

C4M9E2              	100.00%		H3GBC5              	100.00%
Bootstrap support for C4M9E2 as seed ortholog is 100%.
Bootstrap support for H3GBC5 as seed ortholog is 100%.

Group of orthologs #962. Best score 87 bits
Score difference with first non-orthologous sequence - E.histolytica:87 P.ramorum:17

Q7Z0T4              	100.00%		H3HE01              	100.00%
Bootstrap support for Q7Z0T4 as seed ortholog is 100%.
Bootstrap support for H3HE01 as seed ortholog is 72%.
Alternative seed ortholog is H3GMP4 (17 bits away from this cluster)

Group of orthologs #963. Best score 86 bits
Score difference with first non-orthologous sequence - E.histolytica:86 P.ramorum:86

B1N3K9              	100.00%		H3G9W8              	100.00%
C4M9F9              	92.07%		
Bootstrap support for B1N3K9 as seed ortholog is 100%.
Bootstrap support for H3G9W8 as seed ortholog is 100%.

Group of orthologs #964. Best score 86 bits
Score difference with first non-orthologous sequence - E.histolytica:11 P.ramorum:5

C4M2P2              	100.00%		H3G6I8              	100.00%
                    	       		H3GJ12              	82.23%
Bootstrap support for C4M2P2 as seed ortholog is 56%.
Alternative seed ortholog is C4M1J8 (11 bits away from this cluster)
Bootstrap support for H3G6I8 as seed ortholog is 55%.
Alternative seed ortholog is H3HED1 (5 bits away from this cluster)

Group of orthologs #965. Best score 86 bits
Score difference with first non-orthologous sequence - E.histolytica:86 P.ramorum:86

C4LVC0              	100.00%		H3G850              	100.00%
Bootstrap support for C4LVC0 as seed ortholog is 100%.
Bootstrap support for H3G850 as seed ortholog is 100%.

Group of orthologs #966. Best score 86 bits
Score difference with first non-orthologous sequence - E.histolytica:86 P.ramorum:36

C4LXS9              	100.00%		H3GA26              	100.00%
Bootstrap support for C4LXS9 as seed ortholog is 100%.
Bootstrap support for H3GA26 as seed ortholog is 98%.

Group of orthologs #967. Best score 86 bits
Score difference with first non-orthologous sequence - E.histolytica:86 P.ramorum:86

C4LT84              	100.00%		H3GG85              	100.00%
Bootstrap support for C4LT84 as seed ortholog is 100%.
Bootstrap support for H3GG85 as seed ortholog is 100%.

Group of orthologs #968. Best score 86 bits
Score difference with first non-orthologous sequence - E.histolytica:86 P.ramorum:86

C4LV86              	100.00%		H3GI79              	100.00%
Bootstrap support for C4LV86 as seed ortholog is 100%.
Bootstrap support for H3GI79 as seed ortholog is 100%.

Group of orthologs #969. Best score 86 bits
Score difference with first non-orthologous sequence - E.histolytica:86 P.ramorum:86

C4LSB9              	100.00%		H3GPN6              	100.00%
Bootstrap support for C4LSB9 as seed ortholog is 100%.
Bootstrap support for H3GPN6 as seed ortholog is 100%.

Group of orthologs #970. Best score 86 bits
Score difference with first non-orthologous sequence - E.histolytica:86 P.ramorum:86

C4M573              	100.00%		H3GVH6              	100.00%
Bootstrap support for C4M573 as seed ortholog is 100%.
Bootstrap support for H3GVH6 as seed ortholog is 100%.

Group of orthologs #971. Best score 85 bits
Score difference with first non-orthologous sequence - E.histolytica:85 P.ramorum:85

C4M300              	100.00%		H3GZX3              	100.00%
C4LTR1              	25.74%		
C4M380              	24.42%		
C4LUQ6              	17.20%		
Bootstrap support for C4M300 as seed ortholog is 100%.
Bootstrap support for H3GZX3 as seed ortholog is 100%.

Group of orthologs #972. Best score 85 bits
Score difference with first non-orthologous sequence - E.histolytica:85 P.ramorum:85

B1N2H8              	100.00%		H3H721              	100.00%
C4LYH0              	97.19%		H3HC98              	100.00%
Bootstrap support for B1N2H8 as seed ortholog is 100%.
Bootstrap support for H3H721 as seed ortholog is 100%.
Bootstrap support for H3HC98 as seed ortholog is 100%.

Group of orthologs #973. Best score 85 bits
Score difference with first non-orthologous sequence - E.histolytica:85 P.ramorum:85

C4M7M3              	100.00%		H3GBT0              	100.00%
B1N351              	99.00%		
Bootstrap support for C4M7M3 as seed ortholog is 100%.
Bootstrap support for H3GBT0 as seed ortholog is 100%.

Group of orthologs #974. Best score 85 bits
Score difference with first non-orthologous sequence - E.histolytica:85 P.ramorum:85

C4M849              	100.00%		H3GW59              	100.00%
Bootstrap support for C4M849 as seed ortholog is 100%.
Bootstrap support for H3GW59 as seed ortholog is 100%.

Group of orthologs #975. Best score 84 bits
Score difference with first non-orthologous sequence - E.histolytica:84 P.ramorum:84

C4LSC4              	100.00%		H3GAE0              	100.00%
C4M574              	100.00%		
C4LVN9              	95.05%		
Bootstrap support for C4LSC4 as seed ortholog is 100%.
Bootstrap support for C4M574 as seed ortholog is 100%.
Bootstrap support for H3GAE0 as seed ortholog is 100%.

Group of orthologs #976. Best score 84 bits
Score difference with first non-orthologous sequence - E.histolytica:84 P.ramorum:84

C4M379              	100.00%		H3GL41              	100.00%
C4M9X5              	25.51%		
Bootstrap support for C4M379 as seed ortholog is 100%.
Bootstrap support for H3GL41 as seed ortholog is 100%.

Group of orthologs #977. Best score 84 bits
Score difference with first non-orthologous sequence - E.histolytica:84 P.ramorum:11

C4LUF0              	100.00%		H3GHA5              	100.00%
Bootstrap support for C4LUF0 as seed ortholog is 100%.
Bootstrap support for H3GHA5 as seed ortholog is 82%.

Group of orthologs #978. Best score 84 bits
Score difference with first non-orthologous sequence - E.histolytica:84 P.ramorum:84

C4M259              	100.00%		H3HB09              	100.00%
Bootstrap support for C4M259 as seed ortholog is 100%.
Bootstrap support for H3HB09 as seed ortholog is 100%.

Group of orthologs #979. Best score 83 bits
Score difference with first non-orthologous sequence - E.histolytica:83 P.ramorum:83

B1N2W3              	100.00%		H3GFY5              	100.00%
C4M1C9              	100.00%		
Bootstrap support for B1N2W3 as seed ortholog is 100%.
Bootstrap support for C4M1C9 as seed ortholog is 100%.
Bootstrap support for H3GFY5 as seed ortholog is 100%.

Group of orthologs #980. Best score 82 bits
Score difference with first non-orthologous sequence - E.histolytica:82 P.ramorum:82

C4LU91              	100.00%		H3GWC9              	100.00%
                    	       		H3GWC7              	55.29%
                    	       		H3GVJ1              	47.82%
                    	       		H3GVJ2              	46.36%
                    	       		H3GWD0              	35.11%
                    	       		H3GWC8              	33.75%
Bootstrap support for C4LU91 as seed ortholog is 100%.
Bootstrap support for H3GWC9 as seed ortholog is 100%.

Group of orthologs #981. Best score 82 bits
Score difference with first non-orthologous sequence - E.histolytica:82 P.ramorum:82

C4LXQ1              	100.00%		H3GRT1              	100.00%
                    	       		H3H884              	100.00%
Bootstrap support for C4LXQ1 as seed ortholog is 100%.
Bootstrap support for H3GRT1 as seed ortholog is 100%.
Bootstrap support for H3H884 as seed ortholog is 100%.

Group of orthologs #982. Best score 82 bits
Score difference with first non-orthologous sequence - E.histolytica:82 P.ramorum:82

C4M653              	100.00%		H3G5M1              	100.00%
Bootstrap support for C4M653 as seed ortholog is 100%.
Bootstrap support for H3G5M1 as seed ortholog is 100%.

Group of orthologs #983. Best score 82 bits
Score difference with first non-orthologous sequence - E.histolytica:38 P.ramorum:82

C4LVA2              	100.00%		H3GGX7              	100.00%
Bootstrap support for C4LVA2 as seed ortholog is 95%.
Bootstrap support for H3GGX7 as seed ortholog is 100%.

Group of orthologs #984. Best score 82 bits
Score difference with first non-orthologous sequence - E.histolytica:82 P.ramorum:82

C4M758              	100.00%		H3G7X3              	100.00%
Bootstrap support for C4M758 as seed ortholog is 100%.
Bootstrap support for H3G7X3 as seed ortholog is 100%.

Group of orthologs #985. Best score 82 bits
Score difference with first non-orthologous sequence - E.histolytica:82 P.ramorum:82

C4M9V1              	100.00%		H3GIM4              	100.00%
Bootstrap support for C4M9V1 as seed ortholog is 100%.
Bootstrap support for H3GIM4 as seed ortholog is 100%.

Group of orthologs #986. Best score 82 bits
Score difference with first non-orthologous sequence - E.histolytica:82 P.ramorum:82

C4M9U1              	100.00%		H3GXY9              	100.00%
Bootstrap support for C4M9U1 as seed ortholog is 100%.
Bootstrap support for H3GXY9 as seed ortholog is 100%.

Group of orthologs #987. Best score 81 bits
Score difference with first non-orthologous sequence - E.histolytica:81 P.ramorum:81

C4M1U9              	100.00%		H3G9X6              	100.00%
                    	       		H3GXT4              	11.15%
Bootstrap support for C4M1U9 as seed ortholog is 100%.
Bootstrap support for H3G9X6 as seed ortholog is 100%.

Group of orthologs #988. Best score 81 bits
Score difference with first non-orthologous sequence - E.histolytica:81 P.ramorum:81

C4M6L6              	100.00%		H3GBN0              	100.00%
Bootstrap support for C4M6L6 as seed ortholog is 100%.
Bootstrap support for H3GBN0 as seed ortholog is 100%.

Group of orthologs #989. Best score 81 bits
Score difference with first non-orthologous sequence - E.histolytica:81 P.ramorum:31

C4MAP6              	100.00%		H3GAI3              	100.00%
Bootstrap support for C4MAP6 as seed ortholog is 100%.
Bootstrap support for H3GAI3 as seed ortholog is 79%.

Group of orthologs #990. Best score 81 bits
Score difference with first non-orthologous sequence - E.histolytica:81 P.ramorum:81

C4M386              	100.00%		H3GUH2              	100.00%
Bootstrap support for C4M386 as seed ortholog is 100%.
Bootstrap support for H3GUH2 as seed ortholog is 100%.

Group of orthologs #991. Best score 80 bits
Score difference with first non-orthologous sequence - E.histolytica:80 P.ramorum:80

C4LWG0              	100.00%		H3GVR5              	100.00%
C4MAE1              	27.08%		
Bootstrap support for C4LWG0 as seed ortholog is 100%.
Bootstrap support for H3GVR5 as seed ortholog is 100%.

Group of orthologs #992. Best score 80 bits
Score difference with first non-orthologous sequence - E.histolytica:80 P.ramorum:80

C4M9X9              	100.00%		H3G6D7              	100.00%
Bootstrap support for C4M9X9 as seed ortholog is 100%.
Bootstrap support for H3G6D7 as seed ortholog is 100%.

Group of orthologs #993. Best score 79 bits
Score difference with first non-orthologous sequence - E.histolytica:79 P.ramorum:15

C4M793              	100.00%		H3GRK6              	100.00%
C4LTE6              	28.49%		
C4M8Y5              	18.92%		
Bootstrap support for C4M793 as seed ortholog is 100%.
Bootstrap support for H3GRK6 as seed ortholog is 63%.
Alternative seed ortholog is H3GUW1 (15 bits away from this cluster)

Group of orthologs #994. Best score 79 bits
Score difference with first non-orthologous sequence - E.histolytica:79 P.ramorum:79

C4M491              	100.00%		H3GRW0              	100.00%
                    	       		H3H6B9              	99.32%
Bootstrap support for C4M491 as seed ortholog is 100%.
Bootstrap support for H3GRW0 as seed ortholog is 100%.

Group of orthologs #995. Best score 79 bits
Score difference with first non-orthologous sequence - E.histolytica:1 P.ramorum:79

Q1EQ43              	100.00%		H3HAR5              	100.00%
C4LZG8              	19.88%		
Bootstrap support for Q1EQ43 as seed ortholog is 47%.
Alternative seed ortholog is Q1EQ41 (1 bits away from this cluster)
Bootstrap support for H3HAR5 as seed ortholog is 100%.

Group of orthologs #996. Best score 79 bits
Score difference with first non-orthologous sequence - E.histolytica:79 P.ramorum:18

C4LSR3              	100.00%		H3GAG4              	100.00%
Bootstrap support for C4LSR3 as seed ortholog is 100%.
Bootstrap support for H3GAG4 as seed ortholog is 86%.

Group of orthologs #997. Best score 79 bits
Score difference with first non-orthologous sequence - E.histolytica:79 P.ramorum:79

C4LZC4              	100.00%		H3GDW8              	100.00%
Bootstrap support for C4LZC4 as seed ortholog is 100%.
Bootstrap support for H3GDW8 as seed ortholog is 100%.

Group of orthologs #998. Best score 79 bits
Score difference with first non-orthologous sequence - E.histolytica:79 P.ramorum:79

Q8WQ58              	100.00%		H3GBK0              	100.00%
Bootstrap support for Q8WQ58 as seed ortholog is 100%.
Bootstrap support for H3GBK0 as seed ortholog is 100%.

Group of orthologs #999. Best score 79 bits
Score difference with first non-orthologous sequence - E.histolytica:79 P.ramorum:15

C4LT79              	100.00%		H3GWX9              	100.00%
Bootstrap support for C4LT79 as seed ortholog is 100%.
Bootstrap support for H3GWX9 as seed ortholog is 74%.
Alternative seed ortholog is H3GD84 (15 bits away from this cluster)

Group of orthologs #1000. Best score 79 bits
Score difference with first non-orthologous sequence - E.histolytica:32 P.ramorum:79

C4LXG7              	100.00%		H3HD16              	100.00%
Bootstrap support for C4LXG7 as seed ortholog is 90%.
Bootstrap support for H3HD16 as seed ortholog is 100%.

Group of orthologs #1001. Best score 79 bits
Score difference with first non-orthologous sequence - E.histolytica:79 P.ramorum:79

C4M0W4              	100.00%		H3HBN8              	100.00%
Bootstrap support for C4M0W4 as seed ortholog is 100%.
Bootstrap support for H3HBN8 as seed ortholog is 100%.

Group of orthologs #1002. Best score 78 bits
Score difference with first non-orthologous sequence - E.histolytica:78 P.ramorum:78

C4LXC4              	100.00%		H3GAQ9              	100.00%
                    	       		H3H2B2              	100.00%
                    	       		H3H2B4              	99.22%
                    	       		H3GAP1              	82.06%
                    	       		H3GAQ6              	80.40%
                    	       		H3G6W1              	44.19%
                    	       		H3GAC9              	29.90%
Bootstrap support for C4LXC4 as seed ortholog is 100%.
Bootstrap support for H3GAQ9 as seed ortholog is 100%.
Bootstrap support for H3H2B2 as seed ortholog is 100%.

Group of orthologs #1003. Best score 78 bits
Score difference with first non-orthologous sequence - E.histolytica:78 P.ramorum:78

C4M8I4              	100.00%		H3HCZ0              	100.00%
C4MAI0              	19.84%		
C4MAD3              	16.73%		
B1N2V5              	13.62%		
C4MB56              	13.42%		
C4LYH5              	11.48%		
Bootstrap support for C4M8I4 as seed ortholog is 100%.
Bootstrap support for H3HCZ0 as seed ortholog is 100%.

Group of orthologs #1004. Best score 78 bits
Score difference with first non-orthologous sequence - E.histolytica:78 P.ramorum:18

C4LSS7              	100.00%		H3GWE3              	100.00%
Bootstrap support for C4LSS7 as seed ortholog is 100%.
Bootstrap support for H3GWE3 as seed ortholog is 71%.
Alternative seed ortholog is H3GS64 (18 bits away from this cluster)

Group of orthologs #1005. Best score 78 bits
Score difference with first non-orthologous sequence - E.histolytica:78 P.ramorum:78

C4LWB9              	100.00%		H3GVC8              	100.00%
Bootstrap support for C4LWB9 as seed ortholog is 100%.
Bootstrap support for H3GVC8 as seed ortholog is 100%.

Group of orthologs #1006. Best score 77 bits
Score difference with first non-orthologous sequence - E.histolytica:32 P.ramorum:77

C4M607              	100.00%		H3GVL8              	100.00%
B1N2W0              	8.08%		
Bootstrap support for C4M607 as seed ortholog is 87%.
Bootstrap support for H3GVL8 as seed ortholog is 100%.

Group of orthologs #1007. Best score 77 bits
Score difference with first non-orthologous sequence - E.histolytica:77 P.ramorum:77

C4M5D2              	100.00%		H3HA69              	100.00%
                    	       		H3H9T6              	88.19%
Bootstrap support for C4M5D2 as seed ortholog is 100%.
Bootstrap support for H3HA69 as seed ortholog is 100%.

Group of orthologs #1008. Best score 77 bits
Score difference with first non-orthologous sequence - E.histolytica:77 P.ramorum:77

C4M5W0              	100.00%		H3HDX2              	100.00%
C4M3Q9              	61.83%		
Bootstrap support for C4M5W0 as seed ortholog is 100%.
Bootstrap support for H3HDX2 as seed ortholog is 100%.

Group of orthologs #1009. Best score 77 bits
Score difference with first non-orthologous sequence - E.histolytica:77 P.ramorum:77

C4LVM1              	100.00%		H3GBZ8              	100.00%
Bootstrap support for C4LVM1 as seed ortholog is 100%.
Bootstrap support for H3GBZ8 as seed ortholog is 100%.

Group of orthologs #1010. Best score 77 bits
Score difference with first non-orthologous sequence - E.histolytica:77 P.ramorum:77

C4LW37              	100.00%		H3HAV5              	100.00%
Bootstrap support for C4LW37 as seed ortholog is 100%.
Bootstrap support for H3HAV5 as seed ortholog is 100%.

Group of orthologs #1011. Best score 76 bits
Score difference with first non-orthologous sequence - E.histolytica:76 P.ramorum:22

C4LS93              	100.00%		H3GAL9              	100.00%
                    	       		H3G6Q4              	13.76%
                    	       		H3GE36              	11.54%
                    	       		H3GA09              	11.43%
                    	       		H3GA84              	11.21%
                    	       		H3G7D3              	7.77%
Bootstrap support for C4LS93 as seed ortholog is 100%.
Bootstrap support for H3GAL9 as seed ortholog is 66%.
Alternative seed ortholog is H3GHL5 (22 bits away from this cluster)

Group of orthologs #1012. Best score 76 bits
Score difference with first non-orthologous sequence - E.histolytica:76 P.ramorum:16

C4LSQ6              	100.00%		H3GKN1              	100.00%
                    	       		H3GM16              	9.05%
Bootstrap support for C4LSQ6 as seed ortholog is 100%.
Bootstrap support for H3GKN1 as seed ortholog is 75%.

Group of orthologs #1013. Best score 76 bits
Score difference with first non-orthologous sequence - E.histolytica:76 P.ramorum:76

C4LUQ1              	100.00%		H3H1P5              	100.00%
                    	       		H3H1N9              	24.69%
Bootstrap support for C4LUQ1 as seed ortholog is 100%.
Bootstrap support for H3H1P5 as seed ortholog is 100%.

Group of orthologs #1014. Best score 76 bits
Score difference with first non-orthologous sequence - E.histolytica:76 P.ramorum:76

C4M1T3              	100.00%		H3GZW6              	100.00%
                    	       		H3GDF7              	26.84%
Bootstrap support for C4M1T3 as seed ortholog is 100%.
Bootstrap support for H3GZW6 as seed ortholog is 100%.

Group of orthologs #1015. Best score 76 bits
Score difference with first non-orthologous sequence - E.histolytica:76 P.ramorum:76

C4MB67              	100.00%		H3HEE6              	100.00%
C4LWC7              	19.16%		
Bootstrap support for C4MB67 as seed ortholog is 100%.
Bootstrap support for H3HEE6 as seed ortholog is 100%.

Group of orthologs #1016. Best score 76 bits
Score difference with first non-orthologous sequence - E.histolytica:76 P.ramorum:76

B1N483              	100.00%		H3G7Z7              	100.00%
Bootstrap support for B1N483 as seed ortholog is 100%.
Bootstrap support for H3G7Z7 as seed ortholog is 100%.

Group of orthologs #1017. Best score 76 bits
Score difference with first non-orthologous sequence - E.histolytica:76 P.ramorum:76

C4LSH4              	100.00%		H3G937              	100.00%
Bootstrap support for C4LSH4 as seed ortholog is 100%.
Bootstrap support for H3G937 as seed ortholog is 100%.

Group of orthologs #1018. Best score 76 bits
Score difference with first non-orthologous sequence - E.histolytica:76 P.ramorum:76

C4M3G4              	100.00%		H3GTR5              	100.00%
Bootstrap support for C4M3G4 as seed ortholog is 100%.
Bootstrap support for H3GTR5 as seed ortholog is 100%.

Group of orthologs #1019. Best score 76 bits
Score difference with first non-orthologous sequence - E.histolytica:76 P.ramorum:76

C4LXL7              	100.00%		H3H008              	100.00%
Bootstrap support for C4LXL7 as seed ortholog is 100%.
Bootstrap support for H3H008 as seed ortholog is 100%.

Group of orthologs #1020. Best score 76 bits
Score difference with first non-orthologous sequence - E.histolytica:76 P.ramorum:76

C4M143              	100.00%		H3H1L6              	100.00%
Bootstrap support for C4M143 as seed ortholog is 100%.
Bootstrap support for H3H1L6 as seed ortholog is 100%.

Group of orthologs #1021. Best score 76 bits
Score difference with first non-orthologous sequence - E.histolytica:76 P.ramorum:76

C4M6H8              	100.00%		H3GWZ9              	100.00%
Bootstrap support for C4M6H8 as seed ortholog is 100%.
Bootstrap support for H3GWZ9 as seed ortholog is 100%.

Group of orthologs #1022. Best score 75 bits
Score difference with first non-orthologous sequence - E.histolytica:20 P.ramorum:75

C4LUD7              	100.00%		H3GRI7              	100.00%
C4M6D2              	19.72%		H3H8E3              	71.06%
Q5EHP7              	17.05%		
C4M9X2              	13.38%		
C4M4J4              	9.81%		
C4LZF3              	7.43%		
C4MA86              	6.64%		
Bootstrap support for C4LUD7 as seed ortholog is 75%.
Bootstrap support for H3GRI7 as seed ortholog is 100%.

Group of orthologs #1023. Best score 75 bits
Score difference with first non-orthologous sequence - E.histolytica:75 P.ramorum:75

C4MAP1              	100.00%		H3GCT8              	100.00%
C4LZ48              	6.70%		H3GCT9              	43.42%
                    	       		H3GJ38              	29.07%
Bootstrap support for C4MAP1 as seed ortholog is 100%.
Bootstrap support for H3GCT8 as seed ortholog is 100%.

Group of orthologs #1024. Best score 75 bits
Score difference with first non-orthologous sequence - E.histolytica:75 P.ramorum:75

C4LXZ5              	100.00%		H3GZ45              	100.00%
C4M0M2              	47.00%		H3GAR4              	24.67%
                    	       		H3GCI0              	16.40%
Bootstrap support for C4LXZ5 as seed ortholog is 100%.
Bootstrap support for H3GZ45 as seed ortholog is 100%.

Group of orthologs #1025. Best score 75 bits
Score difference with first non-orthologous sequence - E.histolytica:75 P.ramorum:20

C4M7L5              	100.00%		H3GPN5              	100.00%
C4LYF6              	31.53%		
Bootstrap support for C4M7L5 as seed ortholog is 100%.
Bootstrap support for H3GPN5 as seed ortholog is 78%.

Group of orthologs #1026. Best score 74 bits
Score difference with first non-orthologous sequence - E.histolytica:74 P.ramorum:74

C4M8T3              	100.00%		H3GQW4              	100.00%
C4M0T9              	100.00%		H3GQX1              	100.00%
                    	       		H3GQX3              	100.00%
Bootstrap support for C4M8T3 as seed ortholog is 100%.
Bootstrap support for C4M0T9 as seed ortholog is 100%.
Bootstrap support for H3GQW4 as seed ortholog is 100%.
Bootstrap support for H3GQX1 as seed ortholog is 100%.
Bootstrap support for H3GQX3 as seed ortholog is 100%.

Group of orthologs #1027. Best score 74 bits
Score difference with first non-orthologous sequence - E.histolytica:74 P.ramorum:20

C4LYA6              	100.00%		H3GER3              	100.00%
C4MAR9              	17.95%		H3GER2              	20.67%
Bootstrap support for C4LYA6 as seed ortholog is 100%.
Bootstrap support for H3GER3 as seed ortholog is 74%.
Alternative seed ortholog is H3GER7 (20 bits away from this cluster)

Group of orthologs #1028. Best score 74 bits
Score difference with first non-orthologous sequence - E.histolytica:74 P.ramorum:74

C4M3W4              	100.00%		H3H6V6              	100.00%
C4LWQ2              	20.97%		H3H1W4              	99.18%
Bootstrap support for C4M3W4 as seed ortholog is 100%.
Bootstrap support for H3H6V6 as seed ortholog is 100%.

Group of orthologs #1029. Best score 74 bits
Score difference with first non-orthologous sequence - E.histolytica:74 P.ramorum:74

C4M0A8              	100.00%		H3GJC3              	100.00%
C4M8B5              	44.10%		
Bootstrap support for C4M0A8 as seed ortholog is 100%.
Bootstrap support for H3GJC3 as seed ortholog is 100%.

Group of orthologs #1030. Best score 74 bits
Score difference with first non-orthologous sequence - E.histolytica:30 P.ramorum:26

B1N2N5              	100.00%		H3H6J4              	100.00%
B1N345              	99.49%		
Bootstrap support for B1N2N5 as seed ortholog is 86%.
Bootstrap support for H3H6J4 as seed ortholog is 75%.

Group of orthologs #1031. Best score 74 bits
Score difference with first non-orthologous sequence - E.histolytica:74 P.ramorum:74

C4LUK1              	100.00%		H3GF06              	100.00%
Bootstrap support for C4LUK1 as seed ortholog is 100%.
Bootstrap support for H3GF06 as seed ortholog is 100%.

Group of orthologs #1032. Best score 74 bits
Score difference with first non-orthologous sequence - E.histolytica:74 P.ramorum:74

C4MB90              	100.00%		H3G550              	100.00%
Bootstrap support for C4MB90 as seed ortholog is 100%.
Bootstrap support for H3G550 as seed ortholog is 100%.

Group of orthologs #1033. Best score 74 bits
Score difference with first non-orthologous sequence - E.histolytica:74 P.ramorum:74

C4M1C8              	100.00%		H3GID5              	100.00%
Bootstrap support for C4M1C8 as seed ortholog is 100%.
Bootstrap support for H3GID5 as seed ortholog is 100%.

Group of orthologs #1034. Best score 74 bits
Score difference with first non-orthologous sequence - E.histolytica:74 P.ramorum:29

C4M4R8              	100.00%		H3GVP7              	100.00%
Bootstrap support for C4M4R8 as seed ortholog is 100%.
Bootstrap support for H3GVP7 as seed ortholog is 80%.

Group of orthologs #1035. Best score 74 bits
Score difference with first non-orthologous sequence - E.histolytica:74 P.ramorum:74

C4LZA3              	100.00%		H3H107              	100.00%
Bootstrap support for C4LZA3 as seed ortholog is 100%.
Bootstrap support for H3H107 as seed ortholog is 100%.

Group of orthologs #1036. Best score 74 bits
Score difference with first non-orthologous sequence - E.histolytica:74 P.ramorum:74

C4LZP1              	100.00%		H3HBL2              	100.00%
Bootstrap support for C4LZP1 as seed ortholog is 100%.
Bootstrap support for H3HBL2 as seed ortholog is 100%.

Group of orthologs #1037. Best score 74 bits
Score difference with first non-orthologous sequence - E.histolytica:74 P.ramorum:74

C4M0I0              	100.00%		H3HB91              	100.00%
Bootstrap support for C4M0I0 as seed ortholog is 100%.
Bootstrap support for H3HB91 as seed ortholog is 100%.

Group of orthologs #1038. Best score 73 bits
Score difference with first non-orthologous sequence - E.histolytica:73 P.ramorum:73

B1N5A9              	100.00%		H3G5R4              	100.00%
C4MBR6              	100.00%		H3GJR3              	100.00%
C4M078              	98.42%		H3GJR2              	35.37%
                    	       		H3GJR1              	34.01%
                    	       		H3GJR4              	32.65%
                    	       		H3GJW4              	28.80%
                    	       		H3GJF5              	20.18%
                    	       		H3GJW3              	19.27%
Bootstrap support for B1N5A9 as seed ortholog is 100%.
Bootstrap support for C4MBR6 as seed ortholog is 100%.
Bootstrap support for H3G5R4 as seed ortholog is 100%.
Bootstrap support for H3GJR3 as seed ortholog is 100%.

Group of orthologs #1039. Best score 73 bits
Score difference with first non-orthologous sequence - E.histolytica:73 P.ramorum:73

C4M661              	100.00%		H3GGS5              	100.00%
C4LZ75              	67.35%		H3GIY1              	21.43%
C4M660              	27.89%		
Bootstrap support for C4M661 as seed ortholog is 100%.
Bootstrap support for H3GGS5 as seed ortholog is 100%.

Group of orthologs #1040. Best score 73 bits
Score difference with first non-orthologous sequence - E.histolytica:73 P.ramorum:1

C4M1D0              	100.00%		H3GPJ9              	100.00%
                    	       		H3GHQ3              	12.49%
Bootstrap support for C4M1D0 as seed ortholog is 100%.
Bootstrap support for H3GPJ9 as seed ortholog is 46%.
Alternative seed ortholog is H3G945 (1 bits away from this cluster)

Group of orthologs #1041. Best score 73 bits
Score difference with first non-orthologous sequence - E.histolytica:73 P.ramorum:73

C4LX91              	100.00%		H3G7G6              	100.00%
Bootstrap support for C4LX91 as seed ortholog is 100%.
Bootstrap support for H3G7G6 as seed ortholog is 100%.

Group of orthologs #1042. Best score 73 bits
Score difference with first non-orthologous sequence - E.histolytica:26 P.ramorum:73

C4LXT1              	100.00%		H3G733              	100.00%
Bootstrap support for C4LXT1 as seed ortholog is 95%.
Bootstrap support for H3G733 as seed ortholog is 100%.

Group of orthologs #1043. Best score 73 bits
Score difference with first non-orthologous sequence - E.histolytica:73 P.ramorum:73

C4M5M4              	100.00%		H3G809              	100.00%
Bootstrap support for C4M5M4 as seed ortholog is 100%.
Bootstrap support for H3G809 as seed ortholog is 100%.

Group of orthologs #1044. Best score 73 bits
Score difference with first non-orthologous sequence - E.histolytica:73 P.ramorum:17

C4M9I6              	100.00%		H3HAN1              	100.00%
Bootstrap support for C4M9I6 as seed ortholog is 100%.
Bootstrap support for H3HAN1 as seed ortholog is 74%.
Alternative seed ortholog is H3HDX8 (17 bits away from this cluster)

Group of orthologs #1045. Best score 72 bits
Score difference with first non-orthologous sequence - E.histolytica:72 P.ramorum:26

C4LTN0              	100.00%		H3G532              	100.00%
                    	       		H3G8A5              	38.30%
                    	       		H3G9S2              	6.38%
Bootstrap support for C4LTN0 as seed ortholog is 100%.
Bootstrap support for H3G532 as seed ortholog is 89%.

Group of orthologs #1046. Best score 72 bits
Score difference with first non-orthologous sequence - E.histolytica:72 P.ramorum:72

C4LSF3              	100.00%		H3GEH0              	100.00%
                    	       		H3H3Y5              	16.08%
                    	       		H3GYJ3              	11.62%
Bootstrap support for C4LSF3 as seed ortholog is 100%.
Bootstrap support for H3GEH0 as seed ortholog is 100%.

Group of orthologs #1047. Best score 72 bits
Score difference with first non-orthologous sequence - E.histolytica:72 P.ramorum:72

C4LVV2              	100.00%		H3HCL6              	100.00%
C4LVQ2              	24.97%		H3GJZ0              	20.79%
Bootstrap support for C4LVV2 as seed ortholog is 100%.
Bootstrap support for H3HCL6 as seed ortholog is 100%.

Group of orthologs #1048. Best score 72 bits
Score difference with first non-orthologous sequence - E.histolytica:27 P.ramorum:72

C4M9X4              	100.00%		H3GCA8              	100.00%
                    	       		H3H2P9              	10.47%
Bootstrap support for C4M9X4 as seed ortholog is 85%.
Bootstrap support for H3GCA8 as seed ortholog is 100%.

Group of orthologs #1049. Best score 72 bits
Score difference with first non-orthologous sequence - E.histolytica:72 P.ramorum:72

C4LZH1              	100.00%		H3G707              	100.00%
Bootstrap support for C4LZH1 as seed ortholog is 100%.
Bootstrap support for H3G707 as seed ortholog is 100%.

Group of orthologs #1050. Best score 72 bits
Score difference with first non-orthologous sequence - E.histolytica:72 P.ramorum:72

C4M7M7              	100.00%		H3GXF2              	100.00%
Bootstrap support for C4M7M7 as seed ortholog is 100%.
Bootstrap support for H3GXF2 as seed ortholog is 100%.

Group of orthologs #1051. Best score 71 bits
Score difference with first non-orthologous sequence - E.histolytica:71 P.ramorum:71

C4LZQ8              	100.00%		H3G5A1              	100.00%
C4M059              	100.00%		
Bootstrap support for C4LZQ8 as seed ortholog is 100%.
Bootstrap support for C4M059 as seed ortholog is 100%.
Bootstrap support for H3G5A1 as seed ortholog is 100%.

Group of orthologs #1052. Best score 71 bits
Score difference with first non-orthologous sequence - E.histolytica:71 P.ramorum:71

C4LWZ2              	100.00%		H3GXJ8              	100.00%
C4LVR8              	15.38%		
Bootstrap support for C4LWZ2 as seed ortholog is 100%.
Bootstrap support for H3GXJ8 as seed ortholog is 100%.

Group of orthologs #1053. Best score 71 bits
Score difference with first non-orthologous sequence - E.histolytica:71 P.ramorum:71

C4LW10              	100.00%		H3G4Y3              	100.00%
Bootstrap support for C4LW10 as seed ortholog is 100%.
Bootstrap support for H3G4Y3 as seed ortholog is 100%.

Group of orthologs #1054. Best score 71 bits
Score difference with first non-orthologous sequence - E.histolytica:71 P.ramorum:71

C4LW40              	100.00%		H3GXW9              	100.00%
Bootstrap support for C4LW40 as seed ortholog is 100%.
Bootstrap support for H3GXW9 as seed ortholog is 100%.

Group of orthologs #1055. Best score 71 bits
Score difference with first non-orthologous sequence - E.histolytica:71 P.ramorum:71

C4M3Z7              	100.00%		H3GXT3              	100.00%
Bootstrap support for C4M3Z7 as seed ortholog is 100%.
Bootstrap support for H3GXT3 as seed ortholog is 100%.

Group of orthologs #1056. Best score 70 bits
Score difference with first non-orthologous sequence - E.histolytica:70 P.ramorum:70

B1N2V1              	100.00%		H3GJR0              	100.00%
                    	       		H3GJQ9              	31.47%
                    	       		H3GY12              	21.45%
                    	       		H3GDB1              	19.35%
Bootstrap support for B1N2V1 as seed ortholog is 100%.
Bootstrap support for H3GJR0 as seed ortholog is 100%.

Group of orthologs #1057. Best score 70 bits
Score difference with first non-orthologous sequence - E.histolytica:70 P.ramorum:70

C4LY50              	100.00%		H3G844              	100.00%
C4M9F4              	100.00%		
Bootstrap support for C4LY50 as seed ortholog is 100%.
Bootstrap support for C4M9F4 as seed ortholog is 100%.
Bootstrap support for H3G844 as seed ortholog is 100%.

Group of orthologs #1058. Best score 70 bits
Score difference with first non-orthologous sequence - E.histolytica:70 P.ramorum:70

C4M3M0              	100.00%		H3G9X2              	100.00%
Bootstrap support for C4M3M0 as seed ortholog is 100%.
Bootstrap support for H3G9X2 as seed ortholog is 100%.

Group of orthologs #1059. Best score 70 bits
Score difference with first non-orthologous sequence - E.histolytica:70 P.ramorum:70

C4M5X4              	100.00%		H3GSF4              	100.00%
Bootstrap support for C4M5X4 as seed ortholog is 100%.
Bootstrap support for H3GSF4 as seed ortholog is 100%.

Group of orthologs #1060. Best score 69 bits
Score difference with first non-orthologous sequence - E.histolytica:69 P.ramorum:69

C4LVM0              	100.00%		H3G8N4              	100.00%
Bootstrap support for C4LVM0 as seed ortholog is 100%.
Bootstrap support for H3G8N4 as seed ortholog is 100%.

Group of orthologs #1061. Best score 69 bits
Score difference with first non-orthologous sequence - E.histolytica:69 P.ramorum:69

C4MBG4              	100.00%		H3G6G7              	100.00%
Bootstrap support for C4MBG4 as seed ortholog is 100%.
Bootstrap support for H3G6G7 as seed ortholog is 100%.

Group of orthologs #1062. Best score 69 bits
Score difference with first non-orthologous sequence - E.histolytica:69 P.ramorum:69

C4LXH2              	100.00%		H3GKR9              	100.00%
Bootstrap support for C4LXH2 as seed ortholog is 100%.
Bootstrap support for H3GKR9 as seed ortholog is 100%.

Group of orthologs #1063. Best score 69 bits
Score difference with first non-orthologous sequence - E.histolytica:24 P.ramorum:69

C4LVG4              	100.00%		H3GS60              	100.00%
Bootstrap support for C4LVG4 as seed ortholog is 87%.
Bootstrap support for H3GS60 as seed ortholog is 100%.

Group of orthologs #1064. Best score 69 bits
Score difference with first non-orthologous sequence - E.histolytica:69 P.ramorum:69

C4M713              	100.00%		H3GGZ8              	100.00%
Bootstrap support for C4M713 as seed ortholog is 100%.
Bootstrap support for H3GGZ8 as seed ortholog is 100%.

Group of orthologs #1065. Best score 69 bits
Score difference with first non-orthologous sequence - E.histolytica:69 P.ramorum:20

C4MA88              	100.00%		H3GSP0              	100.00%
Bootstrap support for C4MA88 as seed ortholog is 100%.
Bootstrap support for H3GSP0 as seed ortholog is 70%.
Alternative seed ortholog is H3GP77 (20 bits away from this cluster)

Group of orthologs #1066. Best score 68 bits
Score difference with first non-orthologous sequence - E.histolytica:68 P.ramorum:68

C4M6U7              	100.00%		H3GS77              	100.00%
                    	       		H3GS92              	39.49%
Bootstrap support for C4M6U7 as seed ortholog is 100%.
Bootstrap support for H3GS77 as seed ortholog is 100%.

Group of orthologs #1067. Best score 68 bits
Score difference with first non-orthologous sequence - E.histolytica:68 P.ramorum:68

B1N4L3              	100.00%		H3GK42              	100.00%
Bootstrap support for B1N4L3 as seed ortholog is 100%.
Bootstrap support for H3GK42 as seed ortholog is 100%.

Group of orthologs #1068. Best score 68 bits
Score difference with first non-orthologous sequence - E.histolytica:68 P.ramorum:14

C4M1T5              	100.00%		H3H1D1              	100.00%
Bootstrap support for C4M1T5 as seed ortholog is 100%.
Bootstrap support for H3H1D1 as seed ortholog is 60%.
Alternative seed ortholog is H3GS64 (14 bits away from this cluster)

Group of orthologs #1069. Best score 67 bits
Score difference with first non-orthologous sequence - E.histolytica:67 P.ramorum:67

C4MAC8              	100.00%		H3GRE6              	100.00%
B1N416              	19.79%		H3GRF1              	85.86%
C4M9W8              	18.24%		H3GRF3              	32.78%
C4MAR6              	16.45%		H3GJK1              	32.78%
                    	       		H3GJJ8              	32.13%
                    	       		H3GRF4              	30.08%
                    	       		H3GJK2              	29.95%
                    	       		H3HAA9              	29.95%
                    	       		H3GJJ9              	29.18%
                    	       		H3GRE5              	28.53%
                    	       		H3GRF2              	22.62%
                    	       		H3GJJ7              	20.31%
Bootstrap support for C4MAC8 as seed ortholog is 100%.
Bootstrap support for H3GRE6 as seed ortholog is 100%.

Group of orthologs #1070. Best score 67 bits
Score difference with first non-orthologous sequence - E.histolytica:67 P.ramorum:67

C4M8V2              	100.00%		H3GSV5              	100.00%
                    	       		H3GSV7              	81.53%
                    	       		H3GSV6              	75.45%
Bootstrap support for C4M8V2 as seed ortholog is 100%.
Bootstrap support for H3GSV5 as seed ortholog is 100%.

Group of orthologs #1071. Best score 67 bits
Score difference with first non-orthologous sequence - E.histolytica:67 P.ramorum:67

C4M4R7              	100.00%		H3GGB4              	100.00%
B1N3H0              	65.68%		
Bootstrap support for C4M4R7 as seed ortholog is 100%.
Bootstrap support for H3GGB4 as seed ortholog is 100%.

Group of orthologs #1072. Best score 67 bits
Score difference with first non-orthologous sequence - E.histolytica:67 P.ramorum:20

C4LZ35              	100.00%		H3GMK3              	100.00%
Bootstrap support for C4LZ35 as seed ortholog is 100%.
Bootstrap support for H3GMK3 as seed ortholog is 95%.

Group of orthologs #1073. Best score 67 bits
Score difference with first non-orthologous sequence - E.histolytica:67 P.ramorum:67

C4LW93              	100.00%		H3GRS3              	100.00%
Bootstrap support for C4LW93 as seed ortholog is 100%.
Bootstrap support for H3GRS3 as seed ortholog is 100%.

Group of orthologs #1074. Best score 67 bits
Score difference with first non-orthologous sequence - E.histolytica:67 P.ramorum:67

C4LYE5              	100.00%		H3GV05              	100.00%
Bootstrap support for C4LYE5 as seed ortholog is 100%.
Bootstrap support for H3GV05 as seed ortholog is 100%.

Group of orthologs #1075. Best score 66 bits
Score difference with first non-orthologous sequence - E.histolytica:66 P.ramorum:66

C4M0N0              	100.00%		H3H385              	100.00%
                    	       		H3GCQ5              	21.91%
                    	       		H3GJ87              	8.24%
Bootstrap support for C4M0N0 as seed ortholog is 100%.
Bootstrap support for H3H385 as seed ortholog is 100%.

Group of orthologs #1076. Best score 66 bits
Score difference with first non-orthologous sequence - E.histolytica:66 P.ramorum:66

C4LTA2              	100.00%		H3G5I2              	100.00%
Bootstrap support for C4LTA2 as seed ortholog is 100%.
Bootstrap support for H3G5I2 as seed ortholog is 100%.

Group of orthologs #1077. Best score 66 bits
Score difference with first non-orthologous sequence - E.histolytica:16 P.ramorum:66

C4LV23              	100.00%		H3G6Y3              	100.00%
Bootstrap support for C4LV23 as seed ortholog is 88%.
Bootstrap support for H3G6Y3 as seed ortholog is 100%.

Group of orthologs #1078. Best score 66 bits
Score difference with first non-orthologous sequence - E.histolytica:66 P.ramorum:66

C4M4I4              	100.00%		H3G549              	100.00%
Bootstrap support for C4M4I4 as seed ortholog is 100%.
Bootstrap support for H3G549 as seed ortholog is 100%.

Group of orthologs #1079. Best score 66 bits
Score difference with first non-orthologous sequence - E.histolytica:66 P.ramorum:66

B1N4J9              	100.00%		H3GVF6              	100.00%
Bootstrap support for B1N4J9 as seed ortholog is 100%.
Bootstrap support for H3GVF6 as seed ortholog is 100%.

Group of orthologs #1080. Best score 66 bits
Score difference with first non-orthologous sequence - E.histolytica:66 P.ramorum:66

C4M9I3              	100.00%		H3GUD0              	100.00%
Bootstrap support for C4M9I3 as seed ortholog is 100%.
Bootstrap support for H3GUD0 as seed ortholog is 100%.

Group of orthologs #1081. Best score 66 bits
Score difference with first non-orthologous sequence - E.histolytica:66 P.ramorum:66

C4M6S7              	100.00%		H3HCQ9              	100.00%
Bootstrap support for C4M6S7 as seed ortholog is 100%.
Bootstrap support for H3HCQ9 as seed ortholog is 100%.

Group of orthologs #1082. Best score 65 bits
Score difference with first non-orthologous sequence - E.histolytica:65 P.ramorum:65

C4LUW2              	100.00%		H3H0L1              	100.00%
C4LVW5              	86.36%		
C4LYB8              	22.96%		
B1N4I9              	22.96%		
B1N2L7              	22.80%		
B1N2Q2              	19.30%		
C4M9N5              	17.97%		
Bootstrap support for C4LUW2 as seed ortholog is 100%.
Bootstrap support for H3H0L1 as seed ortholog is 100%.

Group of orthologs #1083. Best score 65 bits
Score difference with first non-orthologous sequence - E.histolytica:65 P.ramorum:65

C4M364              	31.21%		H3GQU0              	100.00%
C4LV27              	100.00%		H3H4K5              	100.00%
C4M5Q9              	25.35%		
C4LU21              	20.39%		
C4LVF5              	17.38%		
Bootstrap support for C4LV27 as seed ortholog is 100%.
Bootstrap support for H3GQU0 as seed ortholog is 100%.
Bootstrap support for H3H4K5 as seed ortholog is 100%.

Group of orthologs #1084. Best score 65 bits
Score difference with first non-orthologous sequence - E.histolytica:25 P.ramorum:65

C4LXA7              	100.00%		H3GL56              	100.00%
C4M8D3              	35.74%		H3GGF9              	7.66%
C4LVM3              	24.73%		
B1N2D8              	14.20%		
Bootstrap support for C4LXA7 as seed ortholog is 76%.
Bootstrap support for H3GL56 as seed ortholog is 100%.

Group of orthologs #1085. Best score 65 bits
Score difference with first non-orthologous sequence - E.histolytica:18 P.ramorum:65

C4M658              	100.00%		H3H1L1              	100.00%
C4LYR0              	23.79%		
C4LWD3              	16.74%		
C4MBD8              	15.86%		
Bootstrap support for C4M658 as seed ortholog is 83%.
Bootstrap support for H3H1L1 as seed ortholog is 100%.

Group of orthologs #1086. Best score 65 bits
Score difference with first non-orthologous sequence - E.histolytica:65 P.ramorum:65

C4M9B2              	100.00%		H3GFD8              	100.00%
C4M5C9              	91.17%		
Bootstrap support for C4M9B2 as seed ortholog is 100%.
Bootstrap support for H3GFD8 as seed ortholog is 100%.

Group of orthologs #1087. Best score 65 bits
Score difference with first non-orthologous sequence - E.histolytica:65 P.ramorum:65

B1N4B5              	100.00%		H3G5X3              	100.00%
Bootstrap support for B1N4B5 as seed ortholog is 100%.
Bootstrap support for H3G5X3 as seed ortholog is 100%.

Group of orthologs #1088. Best score 65 bits
Score difference with first non-orthologous sequence - E.histolytica:65 P.ramorum:65

C4LW01              	100.00%		H3GW51              	100.00%
Bootstrap support for C4LW01 as seed ortholog is 100%.
Bootstrap support for H3GW51 as seed ortholog is 100%.

Group of orthologs #1089. Best score 64 bits
Score difference with first non-orthologous sequence - E.histolytica:64 P.ramorum:64

C4MAV9              	100.00%		H3H380              	100.00%
C4M2Y7              	60.92%		
C4M7M1              	48.77%		
Bootstrap support for C4MAV9 as seed ortholog is 100%.
Bootstrap support for H3H380 as seed ortholog is 100%.

Group of orthologs #1090. Best score 64 bits
Score difference with first non-orthologous sequence - E.histolytica:9 P.ramorum:64

C4M4Q8              	100.00%		H3G7X5              	100.00%
Bootstrap support for C4M4Q8 as seed ortholog is 69%.
Alternative seed ortholog is C4LYL4 (9 bits away from this cluster)
Bootstrap support for H3G7X5 as seed ortholog is 100%.

Group of orthologs #1091. Best score 64 bits
Score difference with first non-orthologous sequence - E.histolytica:64 P.ramorum:64

C4MBD7              	100.00%		H3GCJ4              	100.00%
Bootstrap support for C4MBD7 as seed ortholog is 100%.
Bootstrap support for H3GCJ4 as seed ortholog is 100%.

Group of orthologs #1092. Best score 64 bits
Score difference with first non-orthologous sequence - E.histolytica:64 P.ramorum:64

C4M7F5              	100.00%		H3GL10              	100.00%
Bootstrap support for C4M7F5 as seed ortholog is 100%.
Bootstrap support for H3GL10 as seed ortholog is 100%.

Group of orthologs #1093. Best score 63 bits
Score difference with first non-orthologous sequence - E.histolytica:63 P.ramorum:63

C4M8S6              	100.00%		H3H2G3              	100.00%
C4M512              	16.61%		
C4MA90              	15.87%		
Bootstrap support for C4M8S6 as seed ortholog is 100%.
Bootstrap support for H3H2G3 as seed ortholog is 100%.

Group of orthologs #1094. Best score 63 bits
Score difference with first non-orthologous sequence - E.histolytica:63 P.ramorum:63

C4M478              	100.00%		H3GRX3              	100.00%
Bootstrap support for C4M478 as seed ortholog is 100%.
Bootstrap support for H3GRX3 as seed ortholog is 100%.

Group of orthologs #1095. Best score 63 bits
Score difference with first non-orthologous sequence - E.histolytica:63 P.ramorum:63

C4M1G0              	100.00%		H3GUR6              	100.00%
Bootstrap support for C4M1G0 as seed ortholog is 100%.
Bootstrap support for H3GUR6 as seed ortholog is 100%.

Group of orthologs #1096. Best score 62 bits
Score difference with first non-orthologous sequence - E.histolytica:62 P.ramorum:62

C4M6X3              	100.00%		H3G4Z9              	100.00%
C4M7N7              	22.87%		H3H9M3              	9.84%
                    	       		H3GZJ9              	9.51%
Bootstrap support for C4M6X3 as seed ortholog is 100%.
Bootstrap support for H3G4Z9 as seed ortholog is 100%.

Group of orthologs #1097. Best score 62 bits
Score difference with first non-orthologous sequence - E.histolytica:62 P.ramorum:62

C4M6G1              	100.00%		H3GWN1              	100.00%
C4M2L5              	40.18%		
Bootstrap support for C4M6G1 as seed ortholog is 100%.
Bootstrap support for H3GWN1 as seed ortholog is 100%.

Group of orthologs #1098. Best score 62 bits
Score difference with first non-orthologous sequence - E.histolytica:62 P.ramorum:62

C4M939              	100.00%		H3G8P4              	100.00%
Bootstrap support for C4M939 as seed ortholog is 100%.
Bootstrap support for H3G8P4 as seed ortholog is 100%.

Group of orthologs #1099. Best score 62 bits
Score difference with first non-orthologous sequence - E.histolytica:62 P.ramorum:62

C4LU11              	100.00%		H3GNU9              	100.00%
Bootstrap support for C4LU11 as seed ortholog is 100%.
Bootstrap support for H3GNU9 as seed ortholog is 100%.

Group of orthologs #1100. Best score 62 bits
Score difference with first non-orthologous sequence - E.histolytica:62 P.ramorum:62

C4M694              	100.00%		H3GI68              	100.00%
Bootstrap support for C4M694 as seed ortholog is 100%.
Bootstrap support for H3GI68 as seed ortholog is 100%.

Group of orthologs #1101. Best score 61 bits
Score difference with first non-orthologous sequence - E.histolytica:61 P.ramorum:61

C4LTX5              	100.00%		H3GHP1              	100.00%
C4M326              	11.80%		H3GUX6              	6.96%
C4M387              	10.64%		
C4M0C1              	6.96%		
Bootstrap support for C4LTX5 as seed ortholog is 100%.
Bootstrap support for H3GHP1 as seed ortholog is 100%.

Group of orthologs #1102. Best score 61 bits
Score difference with first non-orthologous sequence - E.histolytica:61 P.ramorum:61

C4LXZ8              	100.00%		H3G890              	100.00%
C4MAX0              	28.23%		
C4M6W0              	13.92%		
C4LTZ5              	10.34%		
Bootstrap support for C4LXZ8 as seed ortholog is 100%.
Bootstrap support for H3G890 as seed ortholog is 100%.

Group of orthologs #1103. Best score 61 bits
Score difference with first non-orthologous sequence - E.histolytica:61 P.ramorum:61

C4LUF2              	100.00%		H3GUQ0              	100.00%
C4LXU5              	25.15%		H3HD64              	32.97%
Bootstrap support for C4LUF2 as seed ortholog is 100%.
Bootstrap support for H3GUQ0 as seed ortholog is 100%.

Group of orthologs #1104. Best score 61 bits
Score difference with first non-orthologous sequence - E.histolytica:61 P.ramorum:61

C4LYD5              	100.00%		H3G8J4              	100.00%
Bootstrap support for C4LYD5 as seed ortholog is 100%.
Bootstrap support for H3G8J4 as seed ortholog is 100%.

Group of orthologs #1105. Best score 61 bits
Score difference with first non-orthologous sequence - E.histolytica:61 P.ramorum:61

C4M650              	100.00%		H3G6V0              	100.00%
Bootstrap support for C4M650 as seed ortholog is 100%.
Bootstrap support for H3G6V0 as seed ortholog is 100%.

Group of orthologs #1106. Best score 60 bits
Score difference with first non-orthologous sequence - E.histolytica:60 P.ramorum:60

C4MB75              	100.00%		H3GY17              	100.00%
C4M254              	29.78%		
C4M507              	23.74%		
Bootstrap support for C4MB75 as seed ortholog is 100%.
Bootstrap support for H3GY17 as seed ortholog is 100%.

Group of orthologs #1107. Best score 60 bits
Score difference with first non-orthologous sequence - E.histolytica:60 P.ramorum:60

C4LSC6              	100.00%		H3HD82              	100.00%
Q9U593              	12.60%		
Bootstrap support for C4LSC6 as seed ortholog is 100%.
Bootstrap support for H3HD82 as seed ortholog is 100%.

Group of orthologs #1108. Best score 60 bits
Score difference with first non-orthologous sequence - E.histolytica:18 P.ramorum:60

C4M029              	100.00%		H3GHE5              	100.00%
Bootstrap support for C4M029 as seed ortholog is 69%.
Alternative seed ortholog is C4LYC9 (18 bits away from this cluster)
Bootstrap support for H3GHE5 as seed ortholog is 100%.

Group of orthologs #1109. Best score 60 bits
Score difference with first non-orthologous sequence - E.histolytica:60 P.ramorum:60

C4M977              	100.00%		H3GJI2              	100.00%
Bootstrap support for C4M977 as seed ortholog is 100%.
Bootstrap support for H3GJI2 as seed ortholog is 100%.

Group of orthologs #1110. Best score 60 bits
Score difference with first non-orthologous sequence - E.histolytica:10 P.ramorum:12

C4M021              	100.00%		H3H3F1              	100.00%
Bootstrap support for C4M021 as seed ortholog is 67%.
Alternative seed ortholog is C4LYC9 (10 bits away from this cluster)
Bootstrap support for H3H3F1 as seed ortholog is 72%.
Alternative seed ortholog is H3HD35 (12 bits away from this cluster)

Group of orthologs #1111. Best score 60 bits
Score difference with first non-orthologous sequence - E.histolytica:60 P.ramorum:60

C4M8J9              	100.00%		H3GVL0              	100.00%
Bootstrap support for C4M8J9 as seed ortholog is 100%.
Bootstrap support for H3GVL0 as seed ortholog is 100%.

Group of orthologs #1112. Best score 60 bits
Score difference with first non-orthologous sequence - E.histolytica:60 P.ramorum:3

C4M2J4              	100.00%		H3HCZ5              	100.00%
Bootstrap support for C4M2J4 as seed ortholog is 100%.
Bootstrap support for H3HCZ5 as seed ortholog is 61%.
Alternative seed ortholog is H3GT59 (3 bits away from this cluster)

Group of orthologs #1113. Best score 59 bits
Score difference with first non-orthologous sequence - E.histolytica:59 P.ramorum:59

C4LXL9              	100.00%		H3GXE4              	100.00%
C4M1B8              	8.50%		
Bootstrap support for C4LXL9 as seed ortholog is 100%.
Bootstrap support for H3GXE4 as seed ortholog is 100%.

Group of orthologs #1114. Best score 59 bits
Score difference with first non-orthologous sequence - E.histolytica:59 P.ramorum:59

C4LWW3              	100.00%		H3G538              	100.00%
Bootstrap support for C4LWW3 as seed ortholog is 100%.
Bootstrap support for H3G538 as seed ortholog is 100%.

Group of orthologs #1115. Best score 59 bits
Score difference with first non-orthologous sequence - E.histolytica:59 P.ramorum:59

C4M6Y1              	100.00%		H3GAA3              	100.00%
Bootstrap support for C4M6Y1 as seed ortholog is 100%.
Bootstrap support for H3GAA3 as seed ortholog is 100%.

Group of orthologs #1116. Best score 59 bits
Score difference with first non-orthologous sequence - E.histolytica:59 P.ramorum:59

C4LZA7              	100.00%		H3GMH5              	100.00%
Bootstrap support for C4LZA7 as seed ortholog is 100%.
Bootstrap support for H3GMH5 as seed ortholog is 100%.

Group of orthologs #1117. Best score 59 bits
Score difference with first non-orthologous sequence - E.histolytica:59 P.ramorum:59

C4LVC8              	100.00%		H3GVB2              	100.00%
Bootstrap support for C4LVC8 as seed ortholog is 100%.
Bootstrap support for H3GVB2 as seed ortholog is 100%.

Group of orthologs #1118. Best score 58 bits
Score difference with first non-orthologous sequence - E.histolytica:58 P.ramorum:58

C4M247              	100.00%		H3GC58              	100.00%
C4M4D1              	98.12%		H3HAS6              	83.22%
C4MAJ8              	66.81%		H3GR32              	68.86%
C4LWY9              	44.26%		
C4M8V0              	19.42%		
Bootstrap support for C4M247 as seed ortholog is 100%.
Bootstrap support for H3GC58 as seed ortholog is 100%.

Group of orthologs #1119. Best score 58 bits
Score difference with first non-orthologous sequence - E.histolytica:58 P.ramorum:16

C4LSA3              	100.00%		H3GT62              	100.00%
B1N2E1              	67.35%		H3GT63              	100.00%
Bootstrap support for C4LSA3 as seed ortholog is 100%.
Bootstrap support for H3GT62 as seed ortholog is 75%.
Bootstrap support for H3GT63 as seed ortholog is 76%.

Group of orthologs #1120. Best score 58 bits
Score difference with first non-orthologous sequence - E.histolytica:58 P.ramorum:58

C4MBJ2              	100.00%		H3GTT9              	100.00%
B1N2I5              	90.05%		
Bootstrap support for C4MBJ2 as seed ortholog is 100%.
Bootstrap support for H3GTT9 as seed ortholog is 100%.

Group of orthologs #1121. Best score 58 bits
Score difference with first non-orthologous sequence - E.histolytica:58 P.ramorum:58

C4M5X3              	100.00%		H3GD70              	100.00%
Bootstrap support for C4M5X3 as seed ortholog is 100%.
Bootstrap support for H3GD70 as seed ortholog is 100%.

Group of orthologs #1122. Best score 58 bits
Score difference with first non-orthologous sequence - E.histolytica:58 P.ramorum:58

C4M378              	100.00%		H3H1H2              	100.00%
Bootstrap support for C4M378 as seed ortholog is 100%.
Bootstrap support for H3H1H2 as seed ortholog is 100%.

Group of orthologs #1123. Best score 58 bits
Score difference with first non-orthologous sequence - E.histolytica:58 P.ramorum:58

C4M7P9              	100.00%		H3H8S6              	100.00%
Bootstrap support for C4M7P9 as seed ortholog is 100%.
Bootstrap support for H3H8S6 as seed ortholog is 100%.

Group of orthologs #1124. Best score 57 bits
Score difference with first non-orthologous sequence - E.histolytica:57 P.ramorum:57

C4LSE2              	100.00%		H3GVP3              	100.00%
C4LU20              	23.31%		
C4M4E9              	23.31%		
C4MA89              	21.40%		
C4LU00              	19.49%		
C4M5I0              	18.96%		
C4M9Y5              	17.80%		
C4M0U5              	16.21%		
C4M5V1              	14.09%		
C4M038              	13.03%		
C4LXW5              	11.97%		
C4LYU6              	9.64%		
C4LVE9              	8.37%		
C4LUG2              	7.52%		
C4MAC2              	6.46%		
C4M619              	5.40%		
Bootstrap support for C4LSE2 as seed ortholog is 100%.
Bootstrap support for H3GVP3 as seed ortholog is 100%.

Group of orthologs #1125. Best score 57 bits
Score difference with first non-orthologous sequence - E.histolytica:57 P.ramorum:57

C4LZ47              	100.00%		H3G8V0              	100.00%
                    	       		H3HCR6              	48.45%
Bootstrap support for C4LZ47 as seed ortholog is 100%.
Bootstrap support for H3G8V0 as seed ortholog is 100%.

Group of orthologs #1126. Best score 57 bits
Score difference with first non-orthologous sequence - E.histolytica:57 P.ramorum:1

C4M176              	100.00%		H3GNA2              	100.00%
C4MB10              	27.33%		
Bootstrap support for C4M176 as seed ortholog is 100%.
Bootstrap support for H3GNA2 as seed ortholog is 51%.
Alternative seed ortholog is H3H035 (1 bits away from this cluster)

Group of orthologs #1127. Best score 57 bits
Score difference with first non-orthologous sequence - E.histolytica:57 P.ramorum:57

C4M9Y2              	100.00%		H3G7J4              	100.00%
Bootstrap support for C4M9Y2 as seed ortholog is 100%.
Bootstrap support for H3G7J4 as seed ortholog is 100%.

Group of orthologs #1128. Best score 57 bits
Score difference with first non-orthologous sequence - E.histolytica:57 P.ramorum:57

C4LTZ6              	100.00%		H3H307              	100.00%
Bootstrap support for C4LTZ6 as seed ortholog is 100%.
Bootstrap support for H3H307 as seed ortholog is 100%.

Group of orthologs #1129. Best score 56 bits
Score difference with first non-orthologous sequence - E.histolytica:56 P.ramorum:56

C4LXE4              	100.00%		H3G8X4              	100.00%
C4MAE2              	94.03%		
Bootstrap support for C4LXE4 as seed ortholog is 100%.
Bootstrap support for H3G8X4 as seed ortholog is 100%.

Group of orthologs #1130. Best score 56 bits
Score difference with first non-orthologous sequence - E.histolytica:56 P.ramorum:6

B1N3A8              	100.00%		H3G7V9              	100.00%
Bootstrap support for B1N3A8 as seed ortholog is 100%.
Bootstrap support for H3G7V9 as seed ortholog is 66%.
Alternative seed ortholog is H3GH42 (6 bits away from this cluster)

Group of orthologs #1131. Best score 56 bits
Score difference with first non-orthologous sequence - E.histolytica:15 P.ramorum:12

C4LUD9              	100.00%		H3G5G4              	100.00%
Bootstrap support for C4LUD9 as seed ortholog is 81%.
Bootstrap support for H3G5G4 as seed ortholog is 79%.

Group of orthologs #1132. Best score 56 bits
Score difference with first non-orthologous sequence - E.histolytica:56 P.ramorum:56

C4M2Q0              	100.00%		H3G6N9              	100.00%
Bootstrap support for C4M2Q0 as seed ortholog is 100%.
Bootstrap support for H3G6N9 as seed ortholog is 100%.

Group of orthologs #1133. Best score 56 bits
Score difference with first non-orthologous sequence - E.histolytica:56 P.ramorum:11

C4M232              	100.00%		H3GGJ4              	100.00%
Bootstrap support for C4M232 as seed ortholog is 100%.
Bootstrap support for H3GGJ4 as seed ortholog is 66%.
Alternative seed ortholog is H3HBX8 (11 bits away from this cluster)

Group of orthologs #1134. Best score 56 bits
Score difference with first non-orthologous sequence - E.histolytica:56 P.ramorum:56

C4LVK0              	100.00%		H3GTD7              	100.00%
Bootstrap support for C4LVK0 as seed ortholog is 100%.
Bootstrap support for H3GTD7 as seed ortholog is 100%.

Group of orthologs #1135. Best score 56 bits
Score difference with first non-orthologous sequence - E.histolytica:56 P.ramorum:56

C4M9N2              	100.00%		H3H394              	100.00%
Bootstrap support for C4M9N2 as seed ortholog is 100%.
Bootstrap support for H3H394 as seed ortholog is 100%.

Group of orthologs #1136. Best score 55 bits
Score difference with first non-orthologous sequence - E.histolytica:55 P.ramorum:55

C4LYB6              	100.00%		H3GII9              	100.00%
C4M9H1              	14.02%		H3H7W8              	72.68%
Bootstrap support for C4LYB6 as seed ortholog is 100%.
Bootstrap support for H3GII9 as seed ortholog is 100%.

Group of orthologs #1137. Best score 55 bits
Score difference with first non-orthologous sequence - E.histolytica:55 P.ramorum:55

B1N3I3              	100.00%		H3G705              	100.00%
Bootstrap support for B1N3I3 as seed ortholog is 100%.
Bootstrap support for H3G705 as seed ortholog is 100%.

Group of orthologs #1138. Best score 54 bits
Score difference with first non-orthologous sequence - E.histolytica:54 P.ramorum:54

C4M1C2              	100.00%		H3GF53              	100.00%
                    	       		H3GF52              	59.46%
                    	       		H3GF50              	50.48%
                    	       		H3GF98              	46.38%
                    	       		H3GF48              	46.21%
                    	       		H3GF49              	40.02%
                    	       		H3H0A7              	7.24%
Bootstrap support for C4M1C2 as seed ortholog is 100%.
Bootstrap support for H3GF53 as seed ortholog is 100%.

Group of orthologs #1139. Best score 54 bits
Score difference with first non-orthologous sequence - E.histolytica:54 P.ramorum:54

C4M6F9              	100.00%		H3G589              	100.00%
C4M7I6              	100.00%		
Bootstrap support for C4M6F9 as seed ortholog is 100%.
Bootstrap support for C4M7I6 as seed ortholog is 100%.
Bootstrap support for H3G589 as seed ortholog is 100%.

Group of orthologs #1140. Best score 54 bits
Score difference with first non-orthologous sequence - E.histolytica:54 P.ramorum:54

C4LTZ0              	100.00%		H3HDZ9              	100.00%
C4M803              	36.55%		
Bootstrap support for C4LTZ0 as seed ortholog is 100%.
Bootstrap support for H3HDZ9 as seed ortholog is 100%.

Group of orthologs #1141. Best score 54 bits
Score difference with first non-orthologous sequence - E.histolytica:10 P.ramorum:54

C4M533              	100.00%		H3G8Z6              	100.00%
Bootstrap support for C4M533 as seed ortholog is 65%.
Alternative seed ortholog is C4M7J0 (10 bits away from this cluster)
Bootstrap support for H3G8Z6 as seed ortholog is 100%.

Group of orthologs #1142. Best score 54 bits
Score difference with first non-orthologous sequence - E.histolytica:54 P.ramorum:54

C4M5L4              	100.00%		H3G9P5              	100.00%
Bootstrap support for C4M5L4 as seed ortholog is 100%.
Bootstrap support for H3G9P5 as seed ortholog is 100%.

Group of orthologs #1143. Best score 54 bits
Score difference with first non-orthologous sequence - E.histolytica:54 P.ramorum:54

C4M328              	100.00%		H3GKI7              	100.00%
Bootstrap support for C4M328 as seed ortholog is 100%.
Bootstrap support for H3GKI7 as seed ortholog is 100%.

Group of orthologs #1144. Best score 54 bits
Score difference with first non-orthologous sequence - E.histolytica:54 P.ramorum:54

C4M9F1              	100.00%		H3GYK3              	100.00%
Bootstrap support for C4M9F1 as seed ortholog is 100%.
Bootstrap support for H3GYK3 as seed ortholog is 100%.

Group of orthologs #1145. Best score 53 bits
Score difference with first non-orthologous sequence - E.histolytica:53 P.ramorum:53

C4M405              	100.00%		H3GSY9              	100.00%
                    	       		H3G742              	51.82%
                    	       		H3GSY3              	51.34%
                    	       		H3G9Q5              	51.03%
                    	       		H3HCB8              	50.24%
                    	       		H3H9X5              	48.82%
                    	       		H3GB18              	48.50%
                    	       		H3G9Q4              	47.39%
                    	       		H3GB24              	45.97%
                    	       		H3G9Q6              	44.08%
                    	       		H3G9Q3              	40.13%
                    	       		H3GSY4              	37.44%
                    	       		H3H297              	35.39%
                    	       		H3H296              	35.07%
                    	       		H3H741              	34.91%
                    	       		H3GSY8              	33.65%
                    	       		H3H298              	33.33%
                    	       		H3GAN7              	32.54%
                    	       		H3GAN8              	32.54%
                    	       		H3GAN6              	31.91%
                    	       		H3GAN4              	31.12%
                    	       		H3GAN5              	30.81%
                    	       		H3G8F8              	26.86%
                    	       		H3GAJ4              	23.70%
                    	       		H3GAJ3              	23.70%
Bootstrap support for C4M405 as seed ortholog is 100%.
Bootstrap support for H3GSY9 as seed ortholog is 100%.

Group of orthologs #1146. Best score 53 bits
Score difference with first non-orthologous sequence - E.histolytica:53 P.ramorum:53

Q1EQ42              	100.00%		H3H2J6              	100.00%
Bootstrap support for Q1EQ42 as seed ortholog is 100%.
Bootstrap support for H3H2J6 as seed ortholog is 100%.

Group of orthologs #1147. Best score 52 bits
Score difference with first non-orthologous sequence - E.histolytica:52 P.ramorum:52

C4MB17              	100.00%		H3GI65              	100.00%
C4M2E5              	88.76%		
Bootstrap support for C4MB17 as seed ortholog is 100%.
Bootstrap support for H3GI65 as seed ortholog is 100%.

Group of orthologs #1148. Best score 52 bits
Score difference with first non-orthologous sequence - E.histolytica:52 P.ramorum:52

C4LT92              	100.00%		H3GJJ5              	100.00%
Bootstrap support for C4LT92 as seed ortholog is 100%.
Bootstrap support for H3GJJ5 as seed ortholog is 100%.

Group of orthologs #1149. Best score 52 bits
Score difference with first non-orthologous sequence - E.histolytica:52 P.ramorum:52

C4M4G2              	100.00%		H3GMT9              	100.00%
Bootstrap support for C4M4G2 as seed ortholog is 100%.
Bootstrap support for H3GMT9 as seed ortholog is 100%.

Group of orthologs #1150. Best score 52 bits
Score difference with first non-orthologous sequence - E.histolytica:52 P.ramorum:52

C4LW57              	100.00%		H3GXQ8              	100.00%
Bootstrap support for C4LW57 as seed ortholog is 100%.
Bootstrap support for H3GXQ8 as seed ortholog is 100%.

Group of orthologs #1151. Best score 52 bits
Score difference with first non-orthologous sequence - E.histolytica:52 P.ramorum:52

C4MA61              	100.00%		H3GMW3              	100.00%
Bootstrap support for C4MA61 as seed ortholog is 100%.
Bootstrap support for H3GMW3 as seed ortholog is 100%.

Group of orthologs #1152. Best score 52 bits
Score difference with first non-orthologous sequence - E.histolytica:52 P.ramorum:52

C4M2F4              	100.00%		H3GX90              	100.00%
Bootstrap support for C4M2F4 as seed ortholog is 100%.
Bootstrap support for H3GX90 as seed ortholog is 100%.

Group of orthologs #1153. Best score 51 bits
Score difference with first non-orthologous sequence - E.histolytica:51 P.ramorum:51

C4M4J0              	100.00%		H3GDL7              	100.00%
C4LWJ3              	26.07%		H3GJE9              	64.99%
C4LU83              	25.36%		H3GJL0              	52.43%
C4M3B7              	8.88%		H3GJL5              	51.38%
                    	       		H3GC13              	22.65%
Bootstrap support for C4M4J0 as seed ortholog is 100%.
Bootstrap support for H3GDL7 as seed ortholog is 100%.

Group of orthologs #1154. Best score 51 bits
Score difference with first non-orthologous sequence - E.histolytica:51 P.ramorum:51

C4M2W9              	100.00%		H3G8V2              	100.00%
C4LWT3              	85.71%		
Bootstrap support for C4M2W9 as seed ortholog is 100%.
Bootstrap support for H3G8V2 as seed ortholog is 100%.

Group of orthologs #1155. Best score 51 bits
Score difference with first non-orthologous sequence - E.histolytica:51 P.ramorum:51

C4LT05              	100.00%		H3GKS2              	100.00%
Bootstrap support for C4LT05 as seed ortholog is 100%.
Bootstrap support for H3GKS2 as seed ortholog is 100%.

Group of orthologs #1156. Best score 51 bits
Score difference with first non-orthologous sequence - E.histolytica:2 P.ramorum:51

C4M120              	100.00%		H3GVJ8              	100.00%
Bootstrap support for C4M120 as seed ortholog is 51%.
Alternative seed ortholog is B1N4D1 (2 bits away from this cluster)
Bootstrap support for H3GVJ8 as seed ortholog is 100%.

Group of orthologs #1157. Best score 50 bits
Score difference with first non-orthologous sequence - E.histolytica:50 P.ramorum:50

C4M1I7              	100.00%		H3GDL4              	100.00%
C4LUK9              	14.66%		
C4LTU2              	12.52%		
Bootstrap support for C4M1I7 as seed ortholog is 100%.
Bootstrap support for H3GDL4 as seed ortholog is 100%.

Group of orthologs #1158. Best score 50 bits
Score difference with first non-orthologous sequence - E.histolytica:2 P.ramorum:50

C4LU49              	100.00%		H3G5B7              	100.00%
Bootstrap support for C4LU49 as seed ortholog is 54%.
Alternative seed ortholog is B1N466 (2 bits away from this cluster)
Bootstrap support for H3G5B7 as seed ortholog is 100%.

Group of orthologs #1159. Best score 50 bits
Score difference with first non-orthologous sequence - E.histolytica:50 P.ramorum:2

C4M101              	100.00%		H3GCT5              	100.00%
Bootstrap support for C4M101 as seed ortholog is 100%.
Bootstrap support for H3GCT5 as seed ortholog is 49%.
Alternative seed ortholog is H3HB08 (2 bits away from this cluster)

Group of orthologs #1160. Best score 49 bits
Score difference with first non-orthologous sequence - E.histolytica:1 P.ramorum:49

C4M6I7              	100.00%		H3GM13              	100.00%
                    	       		H3H0E7              	10.83%
Bootstrap support for C4M6I7 as seed ortholog is 47%.
Alternative seed ortholog is C4M6B3 (1 bits away from this cluster)
Bootstrap support for H3GM13 as seed ortholog is 100%.

Group of orthologs #1161. Best score 49 bits
Score difference with first non-orthologous sequence - E.histolytica:49 P.ramorum:49

C4LX37              	100.00%		H3GCK2              	100.00%
Bootstrap support for C4LX37 as seed ortholog is 100%.
Bootstrap support for H3GCK2 as seed ortholog is 100%.

Group of orthologs #1162. Best score 49 bits
Score difference with first non-orthologous sequence - E.histolytica:49 P.ramorum:49

C4LXI3              	100.00%		H3GI13              	100.00%
Bootstrap support for C4LXI3 as seed ortholog is 100%.
Bootstrap support for H3GI13 as seed ortholog is 100%.

Group of orthologs #1163. Best score 49 bits
Score difference with first non-orthologous sequence - E.histolytica:49 P.ramorum:49

C4M174              	100.00%		H3GT42              	100.00%
Bootstrap support for C4M174 as seed ortholog is 100%.
Bootstrap support for H3GT42 as seed ortholog is 100%.

Group of orthologs #1164. Best score 49 bits
Score difference with first non-orthologous sequence - E.histolytica:49 P.ramorum:49

B1N4A2              	100.00%		H3HDA8              	100.00%
Bootstrap support for B1N4A2 as seed ortholog is 100%.
Bootstrap support for H3HDA8 as seed ortholog is 100%.

Group of orthologs #1165. Best score 49 bits
Score difference with first non-orthologous sequence - E.histolytica:49 P.ramorum:49

C4MB02              	100.00%		H3GVX4              	100.00%
Bootstrap support for C4MB02 as seed ortholog is 100%.
Bootstrap support for H3GVX4 as seed ortholog is 100%.

Group of orthologs #1166. Best score 48 bits
Score difference with first non-orthologous sequence - E.histolytica:48 P.ramorum:48

C4M8M9              	100.00%		H3GPZ0              	100.00%
C4M5U7              	22.13%		H3GTS6              	64.43%
Bootstrap support for C4M8M9 as seed ortholog is 100%.
Bootstrap support for H3GPZ0 as seed ortholog is 100%.

Group of orthologs #1167. Best score 48 bits
Score difference with first non-orthologous sequence - E.histolytica:48 P.ramorum:48

C4LU73              	100.00%		H3GR50              	100.00%
                    	       		H3GHU4              	14.13%
Bootstrap support for C4LU73 as seed ortholog is 100%.
Bootstrap support for H3GR50 as seed ortholog is 100%.

Group of orthologs #1168. Best score 47 bits
Score difference with first non-orthologous sequence - E.histolytica:47 P.ramorum:47

C4MA26              	100.00%		H3GHS0              	100.00%
                    	       		H3GWG6              	7.76%
                    	       		H3H4I1              	7.24%
Bootstrap support for C4MA26 as seed ortholog is 100%.
Bootstrap support for H3GHS0 as seed ortholog is 100%.

Group of orthologs #1169. Best score 47 bits
Score difference with first non-orthologous sequence - E.histolytica:47 P.ramorum:47

C4M111              	100.00%		H3HB70              	100.00%
B1N3Q9              	89.39%		
B1N3Y5              	89.39%		
Bootstrap support for C4M111 as seed ortholog is 100%.
Bootstrap support for H3HB70 as seed ortholog is 100%.

Group of orthologs #1170. Best score 47 bits
Score difference with first non-orthologous sequence - E.histolytica:47 P.ramorum:47

C4LUX6              	100.00%		H3G8Q9              	100.00%
                    	       		H3HBH1              	10.81%
Bootstrap support for C4LUX6 as seed ortholog is 100%.
Bootstrap support for H3G8Q9 as seed ortholog is 100%.

Group of orthologs #1171. Best score 47 bits
Score difference with first non-orthologous sequence - E.histolytica:47 P.ramorum:47

C4M3R1              	100.00%		H3GPH0              	100.00%
C4LVE4              	12.59%		
Bootstrap support for C4M3R1 as seed ortholog is 100%.
Bootstrap support for H3GPH0 as seed ortholog is 100%.

Group of orthologs #1172. Best score 47 bits
Score difference with first non-orthologous sequence - E.histolytica:47 P.ramorum:47

B1N380              	100.00%		H3G7H7              	100.00%
Bootstrap support for B1N380 as seed ortholog is 100%.
Bootstrap support for H3G7H7 as seed ortholog is 100%.

Group of orthologs #1173. Best score 47 bits
Score difference with first non-orthologous sequence - E.histolytica:47 P.ramorum:47

C4LXS0              	100.00%		H3GHZ0              	100.00%
Bootstrap support for C4LXS0 as seed ortholog is 100%.
Bootstrap support for H3GHZ0 as seed ortholog is 100%.

Group of orthologs #1174. Best score 47 bits
Score difference with first non-orthologous sequence - E.histolytica:47 P.ramorum:47

C4LWG6              	100.00%		H3GPP7              	100.00%
Bootstrap support for C4LWG6 as seed ortholog is 100%.
Bootstrap support for H3GPP7 as seed ortholog is 100%.

Group of orthologs #1175. Best score 47 bits
Score difference with first non-orthologous sequence - E.histolytica:47 P.ramorum:47

Q1EPZ6              	100.00%		H3GIA4              	100.00%
Bootstrap support for Q1EPZ6 as seed ortholog is 100%.
Bootstrap support for H3GIA4 as seed ortholog is 100%.

Group of orthologs #1176. Best score 47 bits
Score difference with first non-orthologous sequence - E.histolytica:47 P.ramorum:47

C4M7W6              	100.00%		H3H0N6              	100.00%
Bootstrap support for C4M7W6 as seed ortholog is 100%.
Bootstrap support for H3H0N6 as seed ortholog is 100%.

Group of orthologs #1177. Best score 47 bits
Score difference with first non-orthologous sequence - E.histolytica:47 P.ramorum:47

C4M0F7              	100.00%		H3HAM3              	100.00%
Bootstrap support for C4M0F7 as seed ortholog is 100%.
Bootstrap support for H3HAM3 as seed ortholog is 100%.

Group of orthologs #1178. Best score 46 bits
Score difference with first non-orthologous sequence - E.histolytica:46 P.ramorum:46

B1N467              	100.00%		H3GQW5              	100.00%
C4M0P9              	75.00%		H3GQW8              	59.15%
C4M1L5              	24.36%		H3GQW7              	56.10%
                    	       		H3GQW9              	33.54%
                    	       		H3GQX0              	33.54%
                    	       		H3GTU4              	18.29%
Bootstrap support for B1N467 as seed ortholog is 100%.
Bootstrap support for H3GQW5 as seed ortholog is 100%.

Group of orthologs #1179. Best score 46 bits
Score difference with first non-orthologous sequence - E.histolytica:46 P.ramorum:46

C4LUY1              	100.00%		H3GUL3              	100.00%
C4M2B1              	21.99%		H3GUL0              	14.80%
                    	       		H3HA70              	14.08%
                    	       		H3HCK5              	14.08%
                    	       		H3GBT4              	10.26%
                    	       		H3GBT5              	9.07%
Bootstrap support for C4LUY1 as seed ortholog is 100%.
Bootstrap support for H3GUL3 as seed ortholog is 100%.

Group of orthologs #1180. Best score 46 bits
Score difference with first non-orthologous sequence - E.histolytica:46 P.ramorum:46

C4LTW8              	100.00%		H3HBD3              	100.00%
C4M8X8              	7.94%		
Bootstrap support for C4LTW8 as seed ortholog is 100%.
Bootstrap support for H3HBD3 as seed ortholog is 100%.

Group of orthologs #1181. Best score 45 bits
Score difference with first non-orthologous sequence - E.histolytica:45 P.ramorum:45

C4M9D3              	100.00%		H3GYH3              	100.00%
                    	       		H3HDW2              	13.41%
Bootstrap support for C4M9D3 as seed ortholog is 100%.
Bootstrap support for H3GYH3 as seed ortholog is 100%.

Group of orthologs #1182. Best score 45 bits
Score difference with first non-orthologous sequence - E.histolytica:45 P.ramorum:45

B1N4K1              	100.00%		H3GH19              	100.00%
Bootstrap support for B1N4K1 as seed ortholog is 100%.
Bootstrap support for H3GH19 as seed ortholog is 100%.

Group of orthologs #1183. Best score 45 bits
Score difference with first non-orthologous sequence - E.histolytica:45 P.ramorum:45

C4LVR3              	100.00%		H3GWZ0              	100.00%
Bootstrap support for C4LVR3 as seed ortholog is 100%.
Bootstrap support for H3GWZ0 as seed ortholog is 100%.

Group of orthologs #1184. Best score 44 bits
Score difference with first non-orthologous sequence - E.histolytica:44 P.ramorum:44

C4LXG1              	100.00%		H3GAM9              	100.00%
C4LXG4              	62.62%		
Bootstrap support for C4LXG1 as seed ortholog is 100%.
Bootstrap support for H3GAM9 as seed ortholog is 100%.

Group of orthologs #1185. Best score 43 bits
Score difference with first non-orthologous sequence - E.histolytica:43 P.ramorum:43

C4LU47              	100.00%		H3G9T4              	100.00%
C4LTP6              	32.52%		H3GE88              	34.30%
Bootstrap support for C4LU47 as seed ortholog is 100%.
Bootstrap support for H3G9T4 as seed ortholog is 100%.

Group of orthologs #1186. Best score 42 bits
Score difference with first non-orthologous sequence - E.histolytica:42 P.ramorum:42

C4LWM0              	23.34%		H3GTI7              	100.00%
C4LTE8              	100.00%		H3H6P8              	100.00%
C4M344              	18.82%		H3H173              	63.80%
C4M1Q3              	7.32%		H3GTI6              	45.29%
                    	       		H3GM45              	30.04%
                    	       		H3H5N0              	13.45%
Bootstrap support for C4LTE8 as seed ortholog is 100%.
Bootstrap support for H3GTI7 as seed ortholog is 100%.
Bootstrap support for H3H6P8 as seed ortholog is 100%.

Group of orthologs #1187. Best score 42 bits
Score difference with first non-orthologous sequence - E.histolytica:42 P.ramorum:42

C4LWE1              	100.00%		H3G9N0              	100.00%
Bootstrap support for C4LWE1 as seed ortholog is 100%.
Bootstrap support for H3G9N0 as seed ortholog is 100%.

Group of orthologs #1188. Best score 40 bits
Score difference with first non-orthologous sequence - E.histolytica:40 P.ramorum:40

C4M4N2              	96.20%		H3GA24              	100.00%
B1N3D7              	100.00%		H3GA25              	100.00%
C4M3J0              	77.19%		H3HDF4              	100.00%
C4M104              	36.12%		H3G7I8              	81.34%
C4MAX9              	9.13%		H3GW69              	79.11%
C4M023              	8.37%		H3GA56              	67.41%
B1N2Q3              	6.08%		H3GA54              	62.67%
B1N5S9              	5.70%		H3GB09              	61.16%
C4LUJ7              	5.70%		H3GX51              	55.92%
C4M9R4              	5.70%		
C4M9L6              	5.32%		
Bootstrap support for B1N3D7 as seed ortholog is 100%.
Bootstrap support for H3GA24 as seed ortholog is 100%.
Bootstrap support for H3GA25 as seed ortholog is 100%.
Bootstrap support for H3HDF4 as seed ortholog is 100%.

Group of orthologs #1189. Best score 40 bits
Score difference with first non-orthologous sequence - E.histolytica:40 P.ramorum:40

C4MA17              	100.00%		H3GAG6              	100.00%
                    	       		H3G824              	65.95%
Bootstrap support for C4MA17 as seed ortholog is 100%.
Bootstrap support for H3GAG6 as seed ortholog is 100%.