###################################
310 groups of orthologs
533 in-paralogs from E.histolytica
359 in-paralogs from P.kodakaraensis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 750 bits
Score difference with first non-orthologous sequence - E.histolytica:82 P.kodakaraensis:750

C4M3E3              	100.00%		Q5JE32              	100.00%
Bootstrap support for C4M3E3 as seed ortholog is 88%.
Bootstrap support for Q5JE32 as seed ortholog is 100%.

Group of orthologs #2. Best score 610 bits
Score difference with first non-orthologous sequence - E.histolytica:194 P.kodakaraensis:610

C4M626              	100.00%		Q5JE33              	100.00%
Bootstrap support for C4M626 as seed ortholog is 99%.
Bootstrap support for Q5JE33 as seed ortholog is 100%.

Group of orthologs #3. Best score 602 bits
Score difference with first non-orthologous sequence - E.histolytica:124 P.kodakaraensis:602

C4LY22              	100.00%		Q5JE98              	100.00%
C4LTC5              	38.73%		Q9V2X2              	53.87%
Bootstrap support for C4LY22 as seed ortholog is 99%.
Bootstrap support for Q5JE98 as seed ortholog is 100%.

Group of orthologs #4. Best score 590 bits
Score difference with first non-orthologous sequence - E.histolytica:590 P.kodakaraensis:590

Q24802              	100.00%		Q5JIR3              	100.00%
Bootstrap support for Q24802 as seed ortholog is 100%.
Bootstrap support for Q5JIR3 as seed ortholog is 100%.

Group of orthologs #5. Best score 576 bits
Score difference with first non-orthologous sequence - E.histolytica:576 P.kodakaraensis:576

Q4VSM4              	100.00%		Q5JIR2              	100.00%
Bootstrap support for Q4VSM4 as seed ortholog is 100%.
Bootstrap support for Q5JIR2 as seed ortholog is 100%.

Group of orthologs #6. Best score 525 bits
Score difference with first non-orthologous sequence - E.histolytica:525 P.kodakaraensis:525

C4LY19              	100.00%		Q5JJ31              	100.00%
Bootstrap support for C4LY19 as seed ortholog is 100%.
Bootstrap support for Q5JJ31 as seed ortholog is 100%.

Group of orthologs #7. Best score 519 bits
Score difference with first non-orthologous sequence - E.histolytica:430 P.kodakaraensis:519

B1N3P0              	100.00%		Q5JDX6              	100.00%
Bootstrap support for B1N3P0 as seed ortholog is 100%.
Bootstrap support for Q5JDX6 as seed ortholog is 100%.

Group of orthologs #8. Best score 503 bits
Score difference with first non-orthologous sequence - E.histolytica:503 P.kodakaraensis:503

C4LWS5              	100.00%		Q5JIL7              	100.00%
Bootstrap support for C4LWS5 as seed ortholog is 100%.
Bootstrap support for Q5JIL7 as seed ortholog is 100%.

Group of orthologs #9. Best score 461 bits
Score difference with first non-orthologous sequence - E.histolytica:156 P.kodakaraensis:461

B1N3D6              	100.00%		Q5JFZ3              	100.00%
C4M4N3              	100.00%		
B1N306              	98.64%		
Bootstrap support for B1N3D6 as seed ortholog is 99%.
Bootstrap support for C4M4N3 as seed ortholog is 99%.
Bootstrap support for Q5JFZ3 as seed ortholog is 100%.

Group of orthologs #10. Best score 457 bits
Score difference with first non-orthologous sequence - E.histolytica:166 P.kodakaraensis:457

C4M7D4              	100.00%		Q5JFZ4              	100.00%
C4MAC9              	99.08%		
Bootstrap support for C4M7D4 as seed ortholog is 99%.
Bootstrap support for Q5JFZ4 as seed ortholog is 100%.

Group of orthologs #11. Best score 451 bits
Score difference with first non-orthologous sequence - E.histolytica:451 P.kodakaraensis:451

C4M6T2              	100.00%		Q5JCZ1              	100.00%
C4M244              	39.06%		
Bootstrap support for C4M6T2 as seed ortholog is 100%.
Bootstrap support for Q5JCZ1 as seed ortholog is 100%.

Group of orthologs #12. Best score 436 bits
Score difference with first non-orthologous sequence - E.histolytica:436 P.kodakaraensis:436

C4M6P0              	100.00%		Q8NKR7              	100.00%
Bootstrap support for C4M6P0 as seed ortholog is 100%.
Bootstrap support for Q8NKR7 as seed ortholog is 100%.

Group of orthologs #13. Best score 426 bits
Score difference with first non-orthologous sequence - E.histolytica:426 P.kodakaraensis:342

C4LXE8              	100.00%		Q5JEV6              	100.00%
Bootstrap support for C4LXE8 as seed ortholog is 100%.
Bootstrap support for Q5JEV6 as seed ortholog is 100%.

Group of orthologs #14. Best score 425 bits
Score difference with first non-orthologous sequence - E.histolytica:425 P.kodakaraensis:425

C4LXL0              	100.00%		Q5JID8              	100.00%
Bootstrap support for C4LXL0 as seed ortholog is 100%.
Bootstrap support for Q5JID8 as seed ortholog is 100%.

Group of orthologs #15. Best score 424 bits
Score difference with first non-orthologous sequence - E.histolytica:424 P.kodakaraensis:424

C4M2K7              	100.00%		Q5JDZ7              	100.00%
Bootstrap support for C4M2K7 as seed ortholog is 100%.
Bootstrap support for Q5JDZ7 as seed ortholog is 100%.

Group of orthologs #16. Best score 422 bits
Score difference with first non-orthologous sequence - E.histolytica:344 P.kodakaraensis:422

C4M1X8              	100.00%		O93623              	100.00%
Bootstrap support for C4M1X8 as seed ortholog is 100%.
Bootstrap support for O93623 as seed ortholog is 100%.

Group of orthologs #17. Best score 407 bits
Score difference with first non-orthologous sequence - E.histolytica:407 P.kodakaraensis:407

C4LSP0              	100.00%		Q5JIP3              	100.00%
Bootstrap support for C4LSP0 as seed ortholog is 100%.
Bootstrap support for Q5JIP3 as seed ortholog is 100%.

Group of orthologs #18. Best score 403 bits
Score difference with first non-orthologous sequence - E.histolytica:1 P.kodakaraensis:313

C4M1X5              	100.00%		Q5JJA2              	100.00%
Bootstrap support for C4M1X5 as seed ortholog is 93%.
Bootstrap support for Q5JJA2 as seed ortholog is 100%.

Group of orthologs #19. Best score 384 bits
Score difference with first non-orthologous sequence - E.histolytica:4 P.kodakaraensis:384

C4LW75              	100.00%		Q52500              	100.00%
                    	       		P61111              	72.55%
Bootstrap support for C4LW75 as seed ortholog is 43%.
Alternative seed ortholog is C4M2E4 (4 bits away from this cluster)
Bootstrap support for Q52500 as seed ortholog is 100%.

Group of orthologs #20. Best score 374 bits
Score difference with first non-orthologous sequence - E.histolytica:374 P.kodakaraensis:299

C4M7V7              	100.00%		Q5JH71              	100.00%
Bootstrap support for C4M7V7 as seed ortholog is 100%.
Bootstrap support for Q5JH71 as seed ortholog is 100%.

Group of orthologs #21. Best score 368 bits
Score difference with first non-orthologous sequence - E.histolytica:9 P.kodakaraensis:368

C4M8D7              	100.00%		Q5JHS5              	100.00%
B1N4G1              	83.94%		
B1N5Y7              	11.92%		
Bootstrap support for C4M8D7 as seed ortholog is 57%.
Alternative seed ortholog is C4M285 (9 bits away from this cluster)
Bootstrap support for Q5JHS5 as seed ortholog is 100%.

Group of orthologs #22. Best score 367 bits
Score difference with first non-orthologous sequence - E.histolytica:296 P.kodakaraensis:367

C4MAU7              	100.00%		Q5JDL3              	100.00%
Bootstrap support for C4MAU7 as seed ortholog is 100%.
Bootstrap support for Q5JDL3 as seed ortholog is 100%.

Group of orthologs #23. Best score 346 bits
Score difference with first non-orthologous sequence - E.histolytica:6 P.kodakaraensis:346

C4M2G5              	100.00%		Q5JGE5              	100.00%
Bootstrap support for C4M2G5 as seed ortholog is 56%.
Alternative seed ortholog is C4M7P4 (6 bits away from this cluster)
Bootstrap support for Q5JGE5 as seed ortholog is 100%.

Group of orthologs #24. Best score 339 bits
Score difference with first non-orthologous sequence - E.histolytica:339 P.kodakaraensis:339

C4M071              	100.00%		Q5JJC8              	100.00%
Bootstrap support for C4M071 as seed ortholog is 100%.
Bootstrap support for Q5JJC8 as seed ortholog is 100%.

Group of orthologs #25. Best score 335 bits
Score difference with first non-orthologous sequence - E.histolytica:335 P.kodakaraensis:19

C4LUV9              	100.00%		Q5JIA8              	100.00%
                    	       		Q5JEN7              	15.55%
                    	       		Q5JEY6              	6.52%
                    	       		Q5JFH7              	5.85%
Bootstrap support for C4LUV9 as seed ortholog is 100%.
Bootstrap support for Q5JIA8 as seed ortholog is 68%.
Alternative seed ortholog is Q5JEW2 (19 bits away from this cluster)

Group of orthologs #26. Best score 327 bits
Score difference with first non-orthologous sequence - E.histolytica:327 P.kodakaraensis:327

C4M431              	100.00%		Q5JGN7              	100.00%
B1N511              	57.56%		
Bootstrap support for C4M431 as seed ortholog is 100%.
Bootstrap support for Q5JGN7 as seed ortholog is 100%.

Group of orthologs #27. Best score 327 bits
Score difference with first non-orthologous sequence - E.histolytica:9 P.kodakaraensis:327

C4LYY1              	100.00%		Q5JIT1              	100.00%
Bootstrap support for C4LYY1 as seed ortholog is 56%.
Alternative seed ortholog is C4M9H9 (9 bits away from this cluster)
Bootstrap support for Q5JIT1 as seed ortholog is 100%.

Group of orthologs #28. Best score 313 bits
Score difference with first non-orthologous sequence - E.histolytica:313 P.kodakaraensis:313

C4LV24              	100.00%		Q5JE75              	100.00%
B1N346              	33.82%		
Bootstrap support for C4LV24 as seed ortholog is 100%.
Bootstrap support for Q5JE75 as seed ortholog is 100%.

Group of orthologs #29. Best score 311 bits
Score difference with first non-orthologous sequence - E.histolytica:311 P.kodakaraensis:311

C4M2G9              	100.00%		Q5JF49              	100.00%
Bootstrap support for C4M2G9 as seed ortholog is 100%.
Bootstrap support for Q5JF49 as seed ortholog is 100%.

Group of orthologs #30. Best score 304 bits
Score difference with first non-orthologous sequence - E.histolytica:304 P.kodakaraensis:304

B1N2J0              	100.00%		Q5JGC7              	100.00%
Q9NH04              	100.00%		
Bootstrap support for B1N2J0 as seed ortholog is 100%.
Bootstrap support for Q9NH04 as seed ortholog is 100%.
Bootstrap support for Q5JGC7 as seed ortholog is 100%.

Group of orthologs #31. Best score 302 bits
Score difference with first non-orthologous sequence - E.histolytica:302 P.kodakaraensis:302

C4M0K5              	100.00%		Q5JEW3              	100.00%
Bootstrap support for C4M0K5 as seed ortholog is 100%.
Bootstrap support for Q5JEW3 as seed ortholog is 100%.

Group of orthologs #32. Best score 297 bits
Score difference with first non-orthologous sequence - E.histolytica:297 P.kodakaraensis:105

C4LUA1              	100.00%		Q5JGT0              	100.00%
C4LTE7              	71.88%		Q5JIW7              	70.29%
Bootstrap support for C4LUA1 as seed ortholog is 100%.
Bootstrap support for Q5JGT0 as seed ortholog is 99%.

Group of orthologs #33. Best score 297 bits
Score difference with first non-orthologous sequence - E.histolytica:297 P.kodakaraensis:297

C4LU18              	100.00%		Q5JED2              	100.00%
Bootstrap support for C4LU18 as seed ortholog is 100%.
Bootstrap support for Q5JED2 as seed ortholog is 100%.

Group of orthologs #34. Best score 297 bits
Score difference with first non-orthologous sequence - E.histolytica:297 P.kodakaraensis:297

C4LZ14              	100.00%		Q5JIA4              	100.00%
Bootstrap support for C4LZ14 as seed ortholog is 100%.
Bootstrap support for Q5JIA4 as seed ortholog is 100%.

Group of orthologs #35. Best score 284 bits
Score difference with first non-orthologous sequence - E.histolytica:155 P.kodakaraensis:284

C4LU94              	100.00%		Q5JEP3              	100.00%
C4M7U9              	99.01%		
Bootstrap support for C4LU94 as seed ortholog is 100%.
Bootstrap support for Q5JEP3 as seed ortholog is 100%.

Group of orthologs #36. Best score 279 bits
Score difference with first non-orthologous sequence - E.histolytica:279 P.kodakaraensis:177

C4M4K4              	100.00%		Q5JET4              	100.00%
C4LTR6              	13.53%		
Bootstrap support for C4M4K4 as seed ortholog is 100%.
Bootstrap support for Q5JET4 as seed ortholog is 100%.

Group of orthologs #37. Best score 276 bits
Score difference with first non-orthologous sequence - E.histolytica:276 P.kodakaraensis:276

C4M8E1              	100.00%		Q5JJE8              	100.00%
Bootstrap support for C4M8E1 as seed ortholog is 100%.
Bootstrap support for Q5JJE8 as seed ortholog is 100%.

Group of orthologs #38. Best score 267 bits
Score difference with first non-orthologous sequence - E.histolytica:267 P.kodakaraensis:267

C4M828              	100.00%		Q76KA7              	100.00%
Bootstrap support for C4M828 as seed ortholog is 100%.
Bootstrap support for Q76KA7 as seed ortholog is 100%.

Group of orthologs #39. Best score 261 bits
Score difference with first non-orthologous sequence - E.histolytica:261 P.kodakaraensis:261

C4M8V1              	100.00%		Q5JD45              	100.00%
Bootstrap support for C4M8V1 as seed ortholog is 100%.
Bootstrap support for Q5JD45 as seed ortholog is 100%.

Group of orthologs #40. Best score 260 bits
Score difference with first non-orthologous sequence - E.histolytica:260 P.kodakaraensis:260

C4M438              	100.00%		Q5JHC6              	100.00%
Bootstrap support for C4M438 as seed ortholog is 100%.
Bootstrap support for Q5JHC6 as seed ortholog is 100%.

Group of orthologs #41. Best score 257 bits
Score difference with first non-orthologous sequence - E.histolytica:160 P.kodakaraensis:172

C4LWW8              	100.00%		Q5JHC1              	100.00%
Bootstrap support for C4LWW8 as seed ortholog is 99%.
Bootstrap support for Q5JHC1 as seed ortholog is 99%.

Group of orthologs #42. Best score 253 bits
Score difference with first non-orthologous sequence - E.histolytica:169 P.kodakaraensis:253

C4LZN0              	100.00%		Q52428              	100.00%
Bootstrap support for C4LZN0 as seed ortholog is 99%.
Bootstrap support for Q52428 as seed ortholog is 100%.

Group of orthologs #43. Best score 249 bits
Score difference with first non-orthologous sequence - E.histolytica:25 P.kodakaraensis:174

C4LYI1              	100.00%		Q5JFZ6              	100.00%
C4M394              	28.88%		
Bootstrap support for C4LYI1 as seed ortholog is 78%.
Bootstrap support for Q5JFZ6 as seed ortholog is 100%.

Group of orthologs #44. Best score 246 bits
Score difference with first non-orthologous sequence - E.histolytica:184 P.kodakaraensis:246

C4M1K5              	100.00%		Q68BJ6              	100.00%
                    	       		Q68BJ7              	16.64%
                    	       		Q6I7B6              	11.91%
Bootstrap support for C4M1K5 as seed ortholog is 100%.
Bootstrap support for Q68BJ6 as seed ortholog is 100%.

Group of orthologs #45. Best score 243 bits
Score difference with first non-orthologous sequence - E.histolytica:243 P.kodakaraensis:243

C4LZZ7              	100.00%		Q5JI60              	100.00%
Bootstrap support for C4LZZ7 as seed ortholog is 100%.
Bootstrap support for Q5JI60 as seed ortholog is 100%.

Group of orthologs #46. Best score 243 bits
Score difference with first non-orthologous sequence - E.histolytica:243 P.kodakaraensis:243

C4M5H3              	100.00%		Q9HHC4              	100.00%
Bootstrap support for C4M5H3 as seed ortholog is 100%.
Bootstrap support for Q9HHC4 as seed ortholog is 100%.

Group of orthologs #47. Best score 237 bits
Score difference with first non-orthologous sequence - E.histolytica:237 P.kodakaraensis:237

C4M6G8              	100.00%		Q5JGN0              	100.00%
Bootstrap support for C4M6G8 as seed ortholog is 100%.
Bootstrap support for Q5JGN0 as seed ortholog is 100%.

Group of orthologs #48. Best score 233 bits
Score difference with first non-orthologous sequence - E.histolytica:233 P.kodakaraensis:233

C4LW30              	100.00%		Q5JHX1              	100.00%
Bootstrap support for C4LW30 as seed ortholog is 100%.
Bootstrap support for Q5JHX1 as seed ortholog is 100%.

Group of orthologs #49. Best score 233 bits
Score difference with first non-orthologous sequence - E.histolytica:233 P.kodakaraensis:233

C4M5C6              	100.00%		Q877I0              	100.00%
Bootstrap support for C4M5C6 as seed ortholog is 100%.
Bootstrap support for Q877I0 as seed ortholog is 100%.

Group of orthologs #50. Best score 232 bits
Score difference with first non-orthologous sequence - E.histolytica:38 P.kodakaraensis:232

C4M2N7              	100.00%		Q5JEY0              	100.00%
Bootstrap support for C4M2N7 as seed ortholog is 84%.
Bootstrap support for Q5JEY0 as seed ortholog is 100%.

Group of orthologs #51. Best score 231 bits
Score difference with first non-orthologous sequence - E.histolytica:231 P.kodakaraensis:231

C4LSV8              	100.00%		Q5JGK6              	100.00%
Bootstrap support for C4LSV8 as seed ortholog is 100%.
Bootstrap support for Q5JGK6 as seed ortholog is 100%.

Group of orthologs #52. Best score 230 bits
Score difference with first non-orthologous sequence - E.histolytica:230 P.kodakaraensis:230

C4M0E2              	100.00%		P77933              	100.00%
Bootstrap support for C4M0E2 as seed ortholog is 100%.
Bootstrap support for P77933 as seed ortholog is 100%.

Group of orthologs #53. Best score 228 bits
Score difference with first non-orthologous sequence - E.histolytica:228 P.kodakaraensis:228

C4M7C7              	100.00%		Q5JDJ5              	100.00%
Bootstrap support for C4M7C7 as seed ortholog is 100%.
Bootstrap support for Q5JDJ5 as seed ortholog is 100%.

Group of orthologs #54. Best score 226 bits
Score difference with first non-orthologous sequence - E.histolytica:226 P.kodakaraensis:226

C4LW09              	100.00%		Q5JDJ0              	100.00%
B1N4Y7              	81.74%		
Bootstrap support for C4LW09 as seed ortholog is 100%.
Bootstrap support for Q5JDJ0 as seed ortholog is 100%.

Group of orthologs #55. Best score 225 bits
Score difference with first non-orthologous sequence - E.histolytica:225 P.kodakaraensis:225

C4LWA8              	100.00%		Q5JH16              	100.00%
C4M1P6              	5.03%		
Bootstrap support for C4LWA8 as seed ortholog is 100%.
Bootstrap support for Q5JH16 as seed ortholog is 100%.

Group of orthologs #56. Best score 223 bits
Score difference with first non-orthologous sequence - E.histolytica:223 P.kodakaraensis:223

C4LWZ3              	100.00%		Q5JDH2              	100.00%
Bootstrap support for C4LWZ3 as seed ortholog is 100%.
Bootstrap support for Q5JDH2 as seed ortholog is 100%.

Group of orthologs #57. Best score 222 bits
Score difference with first non-orthologous sequence - E.histolytica:222 P.kodakaraensis:222

C4M538              	100.00%		Q76KA8              	100.00%
Bootstrap support for C4M538 as seed ortholog is 100%.
Bootstrap support for Q76KA8 as seed ortholog is 100%.

Group of orthologs #58. Best score 220 bits
Score difference with first non-orthologous sequence - E.histolytica:220 P.kodakaraensis:124

C4M6U0              	100.00%		Q5JES4              	100.00%
Bootstrap support for C4M6U0 as seed ortholog is 100%.
Bootstrap support for Q5JES4 as seed ortholog is 99%.

Group of orthologs #59. Best score 215 bits
Score difference with first non-orthologous sequence - E.histolytica:118 P.kodakaraensis:215

C4LYB5              	100.00%		Q5JHP2              	100.00%
Bootstrap support for C4LYB5 as seed ortholog is 99%.
Bootstrap support for Q5JHP2 as seed ortholog is 100%.

Group of orthologs #60. Best score 214 bits
Score difference with first non-orthologous sequence - E.histolytica:214 P.kodakaraensis:214

B1N2N3              	100.00%		Q5JF17              	100.00%
C4M1T0              	97.87%		
Bootstrap support for B1N2N3 as seed ortholog is 100%.
Bootstrap support for Q5JF17 as seed ortholog is 100%.

Group of orthologs #61. Best score 211 bits
Score difference with first non-orthologous sequence - E.histolytica:211 P.kodakaraensis:211

C4LZV4              	100.00%		Q76CZ1              	100.00%
Bootstrap support for C4LZV4 as seed ortholog is 100%.
Bootstrap support for Q76CZ1 as seed ortholog is 100%.

Group of orthologs #62. Best score 207 bits
Score difference with first non-orthologous sequence - E.histolytica:207 P.kodakaraensis:207

C4MAS9              	100.00%		Q5JH48              	100.00%
Q86D27              	62.28%		
B1N417              	48.44%		
Bootstrap support for C4MAS9 as seed ortholog is 100%.
Bootstrap support for Q5JH48 as seed ortholog is 100%.

Group of orthologs #63. Best score 204 bits
Score difference with first non-orthologous sequence - E.histolytica:7 P.kodakaraensis:204

C4LXH6              	100.00%		Q5JGV6              	100.00%
C4LTD0              	13.65%		
Bootstrap support for C4LXH6 as seed ortholog is 50%.
Alternative seed ortholog is C4M0H7 (7 bits away from this cluster)
Bootstrap support for Q5JGV6 as seed ortholog is 100%.

Group of orthologs #64. Best score 204 bits
Score difference with first non-orthologous sequence - E.histolytica:204 P.kodakaraensis:204

C4LYN2              	100.00%		Q5JFN1              	100.00%
Bootstrap support for C4LYN2 as seed ortholog is 100%.
Bootstrap support for Q5JFN1 as seed ortholog is 100%.

Group of orthologs #65. Best score 201 bits
Score difference with first non-orthologous sequence - E.histolytica:201 P.kodakaraensis:201

C4M7W6              	100.00%		Q5JHF7              	100.00%
                    	       		Q5JE68              	28.30%
Bootstrap support for C4M7W6 as seed ortholog is 100%.
Bootstrap support for Q5JHF7 as seed ortholog is 100%.

Group of orthologs #66. Best score 201 bits
Score difference with first non-orthologous sequence - E.histolytica:201 P.kodakaraensis:201

C4LW95              	100.00%		Q5JIK4              	100.00%
Bootstrap support for C4LW95 as seed ortholog is 100%.
Bootstrap support for Q5JIK4 as seed ortholog is 100%.

Group of orthologs #67. Best score 200 bits
Score difference with first non-orthologous sequence - E.histolytica:145 P.kodakaraensis:200

C4LT63              	100.00%		Q5JFK3              	100.00%
C4LUD0              	94.72%		
C4M5S7              	93.52%		
C4LUR8              	79.98%		
C4M4V4              	78.71%		
C4M1M9              	8.43%		
Bootstrap support for C4LT63 as seed ortholog is 99%.
Bootstrap support for Q5JFK3 as seed ortholog is 100%.

Group of orthologs #68. Best score 198 bits
Score difference with first non-orthologous sequence - E.histolytica:198 P.kodakaraensis:198

C4LZL9              	100.00%		Q5JGF4              	100.00%
Bootstrap support for C4LZL9 as seed ortholog is 100%.
Bootstrap support for Q5JGF4 as seed ortholog is 100%.

Group of orthologs #69. Best score 196 bits
Score difference with first non-orthologous sequence - E.histolytica:196 P.kodakaraensis:196

C4LWZ7              	100.00%		Q5JFE7              	100.00%
Bootstrap support for C4LWZ7 as seed ortholog is 100%.
Bootstrap support for Q5JFE7 as seed ortholog is 100%.

Group of orthologs #70. Best score 195 bits
Score difference with first non-orthologous sequence - E.histolytica:195 P.kodakaraensis:195

C4M656              	100.00%		Q5JE24              	100.00%
C4LZR4              	9.18%		
Bootstrap support for C4M656 as seed ortholog is 100%.
Bootstrap support for Q5JE24 as seed ortholog is 100%.

Group of orthologs #71. Best score 195 bits
Score difference with first non-orthologous sequence - E.histolytica:128 P.kodakaraensis:138

C4M5F3              	100.00%		Q5JGQ7              	100.00%
C4LXS3              	18.49%		
Bootstrap support for C4M5F3 as seed ortholog is 99%.
Bootstrap support for Q5JGQ7 as seed ortholog is 99%.

Group of orthologs #72. Best score 195 bits
Score difference with first non-orthologous sequence - E.histolytica:103 P.kodakaraensis:55

C4LWT4              	100.00%		Q5JI15              	100.00%
Bootstrap support for C4LWT4 as seed ortholog is 99%.
Bootstrap support for Q5JI15 as seed ortholog is 96%.

Group of orthologs #73. Best score 194 bits
Score difference with first non-orthologous sequence - E.histolytica:194 P.kodakaraensis:194

C4LWX7              	100.00%		Q5JGH7              	100.00%
Bootstrap support for C4LWX7 as seed ortholog is 100%.
Bootstrap support for Q5JGH7 as seed ortholog is 100%.

Group of orthologs #74. Best score 194 bits
Score difference with first non-orthologous sequence - E.histolytica:52 P.kodakaraensis:194

C4M3Y9              	100.00%		Q5JF74              	100.00%
Bootstrap support for C4M3Y9 as seed ortholog is 94%.
Bootstrap support for Q5JF74 as seed ortholog is 100%.

Group of orthologs #75. Best score 193 bits
Score difference with first non-orthologous sequence - E.histolytica:193 P.kodakaraensis:193

C4M192              	100.00%		Q5JIG7              	100.00%
Bootstrap support for C4M192 as seed ortholog is 100%.
Bootstrap support for Q5JIG7 as seed ortholog is 100%.

Group of orthologs #76. Best score 193 bits
Score difference with first non-orthologous sequence - E.histolytica:193 P.kodakaraensis:193

C4M653              	100.00%		Q5JIM2              	100.00%
Bootstrap support for C4M653 as seed ortholog is 100%.
Bootstrap support for Q5JIM2 as seed ortholog is 100%.

Group of orthologs #77. Best score 191 bits
Score difference with first non-orthologous sequence - E.histolytica:11 P.kodakaraensis:191

C4LUL4              	100.00%		Q5JIU9              	100.00%
Bootstrap support for C4LUL4 as seed ortholog is 63%.
Alternative seed ortholog is C4M7Z3 (11 bits away from this cluster)
Bootstrap support for Q5JIU9 as seed ortholog is 100%.

Group of orthologs #78. Best score 190 bits
Score difference with first non-orthologous sequence - E.histolytica:85 P.kodakaraensis:190

C4MAW3              	100.00%		Q5JFN0              	100.00%
C4M5N2              	16.52%		
Bootstrap support for C4MAW3 as seed ortholog is 99%.
Bootstrap support for Q5JFN0 as seed ortholog is 100%.

Group of orthologs #79. Best score 187 bits
Score difference with first non-orthologous sequence - E.histolytica:81 P.kodakaraensis:187

C4LYC2              	100.00%		Q5JG47              	100.00%
C4M8I1              	14.89%		
Bootstrap support for C4LYC2 as seed ortholog is 99%.
Bootstrap support for Q5JG47 as seed ortholog is 100%.

Group of orthologs #80. Best score 185 bits
Score difference with first non-orthologous sequence - E.histolytica:106 P.kodakaraensis:136

C4M840              	100.00%		Q5JDV8              	100.00%
                    	       		Q5JIM8              	6.72%
Bootstrap support for C4M840 as seed ortholog is 99%.
Bootstrap support for Q5JDV8 as seed ortholog is 99%.

Group of orthologs #81. Best score 185 bits
Score difference with first non-orthologous sequence - E.histolytica:185 P.kodakaraensis:135

C4LYJ7              	100.00%		Q5JEK8              	100.00%
Bootstrap support for C4LYJ7 as seed ortholog is 100%.
Bootstrap support for Q5JEK8 as seed ortholog is 99%.

Group of orthologs #82. Best score 183 bits
Score difference with first non-orthologous sequence - E.histolytica:183 P.kodakaraensis:91

C4M7W7              	100.00%		Q5JDD8              	100.00%
Bootstrap support for C4M7W7 as seed ortholog is 100%.
Bootstrap support for Q5JDD8 as seed ortholog is 99%.

Group of orthologs #83. Best score 179 bits
Score difference with first non-orthologous sequence - E.histolytica:179 P.kodakaraensis:179

C4M3S0              	100.00%		Q5JE40              	100.00%
Bootstrap support for C4M3S0 as seed ortholog is 100%.
Bootstrap support for Q5JE40 as seed ortholog is 100%.

Group of orthologs #84. Best score 174 bits
Score difference with first non-orthologous sequence - E.histolytica:174 P.kodakaraensis:174

C4M802              	100.00%		Q5JFV8              	100.00%
Bootstrap support for C4M802 as seed ortholog is 100%.
Bootstrap support for Q5JFV8 as seed ortholog is 100%.

Group of orthologs #85. Best score 173 bits
Score difference with first non-orthologous sequence - E.histolytica:25 P.kodakaraensis:173

Q76KF6              	100.00%		Q5JGC4              	100.00%
                    	       		Q5JEZ2              	18.12%
                    	       		Q5JF48              	7.73%
Bootstrap support for Q76KF6 as seed ortholog is 74%.
Alternative seed ortholog is Q76KF5 (25 bits away from this cluster)
Bootstrap support for Q5JGC4 as seed ortholog is 100%.

Group of orthologs #86. Best score 171 bits
Score difference with first non-orthologous sequence - E.histolytica:171 P.kodakaraensis:171

Q24801              	100.00%		Q5JGQ1              	100.00%
Bootstrap support for Q24801 as seed ortholog is 100%.
Bootstrap support for Q5JGQ1 as seed ortholog is 100%.

Group of orthologs #87. Best score 170 bits
Score difference with first non-orthologous sequence - E.histolytica:42 P.kodakaraensis:170

C4LYN8              	100.00%		Q5JE76              	100.00%
C4M9V6              	12.95%		
Bootstrap support for C4LYN8 as seed ortholog is 86%.
Bootstrap support for Q5JE76 as seed ortholog is 100%.

Group of orthologs #88. Best score 170 bits
Score difference with first non-orthologous sequence - E.histolytica:170 P.kodakaraensis:170

C4M8Q4              	100.00%		Q5JH96              	100.00%
C4M8K7              	74.07%		
Bootstrap support for C4M8Q4 as seed ortholog is 100%.
Bootstrap support for Q5JH96 as seed ortholog is 100%.

Group of orthologs #89. Best score 169 bits
Score difference with first non-orthologous sequence - E.histolytica:169 P.kodakaraensis:169

B1N2I3              	100.00%		Q5JJF3              	100.00%
Bootstrap support for B1N2I3 as seed ortholog is 100%.
Bootstrap support for Q5JJF3 as seed ortholog is 100%.

Group of orthologs #90. Best score 167 bits
Score difference with first non-orthologous sequence - E.histolytica:167 P.kodakaraensis:167

C4LUV6              	100.00%		Q5JIW4              	100.00%
C4LTU4              	32.48%		
Bootstrap support for C4LUV6 as seed ortholog is 100%.
Bootstrap support for Q5JIW4 as seed ortholog is 100%.

Group of orthologs #91. Best score 167 bits
Score difference with first non-orthologous sequence - E.histolytica:167 P.kodakaraensis:167

C4LT44              	100.00%		Q5JIB3              	100.00%
Bootstrap support for C4LT44 as seed ortholog is 100%.
Bootstrap support for Q5JIB3 as seed ortholog is 100%.

Group of orthologs #92. Best score 165 bits
Score difference with first non-orthologous sequence - E.histolytica:165 P.kodakaraensis:165

C4LZ12              	100.00%		Q5JF63              	100.00%
Bootstrap support for C4LZ12 as seed ortholog is 100%.
Bootstrap support for Q5JF63 as seed ortholog is 100%.

Group of orthologs #93. Best score 165 bits
Score difference with first non-orthologous sequence - E.histolytica:56 P.kodakaraensis:165

C4M297              	100.00%		Q5JH24              	100.00%
Bootstrap support for C4M297 as seed ortholog is 87%.
Bootstrap support for Q5JH24 as seed ortholog is 100%.

Group of orthologs #94. Best score 163 bits
Score difference with first non-orthologous sequence - E.histolytica:108 P.kodakaraensis:163

C4M7F5              	100.00%		Q5JJB1              	100.00%
Bootstrap support for C4M7F5 as seed ortholog is 99%.
Bootstrap support for Q5JJB1 as seed ortholog is 100%.

Group of orthologs #95. Best score 162 bits
Score difference with first non-orthologous sequence - E.histolytica:53 P.kodakaraensis:162

C4LWW4              	100.00%		Q5JGD1              	100.00%
Bootstrap support for C4LWW4 as seed ortholog is 93%.
Bootstrap support for Q5JGD1 as seed ortholog is 100%.

Group of orthologs #96. Best score 161 bits
Score difference with first non-orthologous sequence - E.histolytica:161 P.kodakaraensis:161

B1N2F9              	100.00%		Q5JHZ0              	100.00%
C4M0C2              	64.78%		
C4LX61              	55.87%		
C4M5R3              	53.79%		
Bootstrap support for B1N2F9 as seed ortholog is 100%.
Bootstrap support for Q5JHZ0 as seed ortholog is 100%.

Group of orthologs #97. Best score 160 bits
Score difference with first non-orthologous sequence - E.histolytica:160 P.kodakaraensis:43

C4M6F5              	100.00%		Q5JEM4              	100.00%
C4M8M2              	19.26%		
B1N445              	10.44%		
Bootstrap support for C4M6F5 as seed ortholog is 100%.
Bootstrap support for Q5JEM4 as seed ortholog is 91%.

Group of orthologs #98. Best score 159 bits
Score difference with first non-orthologous sequence - E.histolytica:159 P.kodakaraensis:159

C4LZG9              	100.00%		Q5JJG1              	100.00%
C4LZP2              	100.00%		
Bootstrap support for C4LZG9 as seed ortholog is 100%.
Bootstrap support for C4LZP2 as seed ortholog is 100%.
Bootstrap support for Q5JJG1 as seed ortholog is 100%.

Group of orthologs #99. Best score 156 bits
Score difference with first non-orthologous sequence - E.histolytica:156 P.kodakaraensis:109

C4M7J5              	100.00%		Q5JHS7              	100.00%
Bootstrap support for C4M7J5 as seed ortholog is 100%.
Bootstrap support for Q5JHS7 as seed ortholog is 99%.

Group of orthologs #100. Best score 153 bits
Score difference with first non-orthologous sequence - E.histolytica:90 P.kodakaraensis:153

C4M079              	100.00%		Q5JGE0              	100.00%
Bootstrap support for C4M079 as seed ortholog is 99%.
Bootstrap support for Q5JGE0 as seed ortholog is 100%.

Group of orthologs #101. Best score 153 bits
Score difference with first non-orthologous sequence - E.histolytica:153 P.kodakaraensis:153

C4M7U0              	100.00%		Q5JJG8              	100.00%
Bootstrap support for C4M7U0 as seed ortholog is 100%.
Bootstrap support for Q5JJG8 as seed ortholog is 100%.

Group of orthologs #102. Best score 152 bits
Score difference with first non-orthologous sequence - E.histolytica:50 P.kodakaraensis:152

C4M1V7              	100.00%		Q5JDF4              	100.00%
C4M3X0              	10.18%		
C4M2K1              	9.22%		
C4M1F1              	8.65%		
Bootstrap support for C4M1V7 as seed ortholog is 85%.
Bootstrap support for Q5JDF4 as seed ortholog is 100%.

Group of orthologs #103. Best score 149 bits
Score difference with first non-orthologous sequence - E.histolytica:149 P.kodakaraensis:149

C4M7U2              	100.00%		Q5JH43              	100.00%
Bootstrap support for C4M7U2 as seed ortholog is 100%.
Bootstrap support for Q5JH43 as seed ortholog is 100%.

Group of orthologs #104. Best score 148 bits
Score difference with first non-orthologous sequence - E.histolytica:148 P.kodakaraensis:148

C4M1T1              	100.00%		Q5JJH1              	100.00%
Bootstrap support for C4M1T1 as seed ortholog is 100%.
Bootstrap support for Q5JJH1 as seed ortholog is 100%.

Group of orthologs #105. Best score 147 bits
Score difference with first non-orthologous sequence - E.histolytica:147 P.kodakaraensis:147

C4LXX5              	100.00%		Q5JDI0              	100.00%
C4LZU1              	99.00%		
B1N384              	98.71%		
C4LZA2              	98.71%		
Bootstrap support for C4LXX5 as seed ortholog is 100%.
Bootstrap support for Q5JDI0 as seed ortholog is 100%.

Group of orthologs #106. Best score 146 bits
Score difference with first non-orthologous sequence - E.histolytica:146 P.kodakaraensis:146

C4LVZ6              	100.00%		Q5JE04              	100.00%
C4LT81              	96.51%		
Bootstrap support for C4LVZ6 as seed ortholog is 100%.
Bootstrap support for Q5JE04 as seed ortholog is 100%.

Group of orthologs #107. Best score 146 bits
Score difference with first non-orthologous sequence - E.histolytica:146 P.kodakaraensis:146

B1N2Z3              	100.00%		Q5JH36              	100.00%
Bootstrap support for B1N2Z3 as seed ortholog is 100%.
Bootstrap support for Q5JH36 as seed ortholog is 100%.

Group of orthologs #108. Best score 145 bits
Score difference with first non-orthologous sequence - E.histolytica:145 P.kodakaraensis:145

C4LVZ9              	100.00%		Q5JJG4              	100.00%
C4M9B0              	98.39%		
Bootstrap support for C4LVZ9 as seed ortholog is 100%.
Bootstrap support for Q5JJG4 as seed ortholog is 100%.

Group of orthologs #109. Best score 144 bits
Score difference with first non-orthologous sequence - E.histolytica:144 P.kodakaraensis:144

C4LYF4              	100.00%		Q5JJG0              	100.00%
B1N336              	95.34%		
B1N418              	47.18%		
Bootstrap support for C4LYF4 as seed ortholog is 100%.
Bootstrap support for Q5JJG0 as seed ortholog is 100%.

Group of orthologs #110. Best score 144 bits
Score difference with first non-orthologous sequence - E.histolytica:73 P.kodakaraensis:144

C4M2G1              	100.00%		Q5JIR6              	100.00%
Bootstrap support for C4M2G1 as seed ortholog is 99%.
Bootstrap support for Q5JIR6 as seed ortholog is 100%.

Group of orthologs #111. Best score 143 bits
Score difference with first non-orthologous sequence - E.histolytica:65 P.kodakaraensis:143

C4LYY8              	100.00%		Q5JEX2              	100.00%
Bootstrap support for C4LYY8 as seed ortholog is 99%.
Bootstrap support for Q5JEX2 as seed ortholog is 100%.

Group of orthologs #112. Best score 143 bits
Score difference with first non-orthologous sequence - E.histolytica:143 P.kodakaraensis:143

C4LXN0              	100.00%		Q5JI54              	100.00%
Bootstrap support for C4LXN0 as seed ortholog is 100%.
Bootstrap support for Q5JI54 as seed ortholog is 100%.

Group of orthologs #113. Best score 142 bits
Score difference with first non-orthologous sequence - E.histolytica:13 P.kodakaraensis:142

C4LVV7              	100.00%		Q5JIE4              	100.00%
C4M255              	93.45%		
Bootstrap support for C4LVV7 as seed ortholog is 59%.
Alternative seed ortholog is C4M746 (13 bits away from this cluster)
Bootstrap support for Q5JIE4 as seed ortholog is 100%.

Group of orthologs #114. Best score 140 bits
Score difference with first non-orthologous sequence - E.histolytica:83 P.kodakaraensis:140

C4LU69              	100.00%		Q5JIH2              	100.00%
C4MA64              	17.94%		
Bootstrap support for C4LU69 as seed ortholog is 99%.
Bootstrap support for Q5JIH2 as seed ortholog is 100%.

Group of orthologs #115. Best score 140 bits
Score difference with first non-orthologous sequence - E.histolytica:140 P.kodakaraensis:140

C4M8C7              	100.00%		Q5JJ82              	100.00%
Bootstrap support for C4M8C7 as seed ortholog is 100%.
Bootstrap support for Q5JJ82 as seed ortholog is 100%.

Group of orthologs #116. Best score 136 bits
Score difference with first non-orthologous sequence - E.histolytica:136 P.kodakaraensis:136

C4LZ42              	100.00%		Q5JJF1              	100.00%
C4M367              	87.36%		
Bootstrap support for C4LZ42 as seed ortholog is 100%.
Bootstrap support for Q5JJF1 as seed ortholog is 100%.

Group of orthologs #117. Best score 135 bits
Score difference with first non-orthologous sequence - E.histolytica:55 P.kodakaraensis:76

C4M2P2              	100.00%		Q5JHU0              	100.00%
                    	       		Q5JF51              	32.52%
Bootstrap support for C4M2P2 as seed ortholog is 91%.
Bootstrap support for Q5JHU0 as seed ortholog is 96%.

Group of orthologs #118. Best score 134 bits
Score difference with first non-orthologous sequence - E.histolytica:134 P.kodakaraensis:89

C4LS93              	100.00%		Q5JFZ8              	100.00%
                    	       		Q5JGP4              	16.39%
                    	       		Q5JJB9              	10.50%
                    	       		Q5JHY2              	7.70%
Bootstrap support for C4LS93 as seed ortholog is 100%.
Bootstrap support for Q5JFZ8 as seed ortholog is 98%.

Group of orthologs #119. Best score 134 bits
Score difference with first non-orthologous sequence - E.histolytica:47 P.kodakaraensis:134

C4M3B2              	100.00%		Q5JF69              	100.00%
C4M422              	65.96%		
C4LVN6              	64.17%		
C4M3W0              	63.38%		
Bootstrap support for C4M3B2 as seed ortholog is 87%.
Bootstrap support for Q5JF69 as seed ortholog is 100%.

Group of orthologs #120. Best score 134 bits
Score difference with first non-orthologous sequence - E.histolytica:55 P.kodakaraensis:67

C4LWI5              	100.00%		Q5JE21              	100.00%
C4LX51              	52.27%		
Bootstrap support for C4LWI5 as seed ortholog is 91%.
Bootstrap support for Q5JE21 as seed ortholog is 93%.

Group of orthologs #121. Best score 134 bits
Score difference with first non-orthologous sequence - E.histolytica:134 P.kodakaraensis:134

C4LSI0              	100.00%		Q5JHL2              	100.00%
Bootstrap support for C4LSI0 as seed ortholog is 100%.
Bootstrap support for Q5JHL2 as seed ortholog is 100%.

Group of orthologs #122. Best score 134 bits
Score difference with first non-orthologous sequence - E.histolytica:134 P.kodakaraensis:134

C4LW89              	100.00%		Q5JEZ6              	100.00%
Bootstrap support for C4LW89 as seed ortholog is 100%.
Bootstrap support for Q5JEZ6 as seed ortholog is 100%.

Group of orthologs #123. Best score 134 bits
Score difference with first non-orthologous sequence - E.histolytica:134 P.kodakaraensis:134

C4M0I4              	100.00%		Q5JJ91              	100.00%
Bootstrap support for C4M0I4 as seed ortholog is 100%.
Bootstrap support for Q5JJ91 as seed ortholog is 100%.

Group of orthologs #124. Best score 133 bits
Score difference with first non-orthologous sequence - E.histolytica:133 P.kodakaraensis:133

C4M9Z7              	100.00%		Q5JEZ9              	100.00%
B1N3U1              	23.89%		Q5JH45              	7.26%
B1N4V2              	21.07%		
B1N2J5              	12.23%		
Bootstrap support for C4M9Z7 as seed ortholog is 100%.
Bootstrap support for Q5JEZ9 as seed ortholog is 100%.

Group of orthologs #125. Best score 133 bits
Score difference with first non-orthologous sequence - E.histolytica:133 P.kodakaraensis:133

C4M773              	100.00%		Q5JDB6              	100.00%
Bootstrap support for C4M773 as seed ortholog is 100%.
Bootstrap support for Q5JDB6 as seed ortholog is 100%.

Group of orthologs #126. Best score 132 bits
Score difference with first non-orthologous sequence - E.histolytica:132 P.kodakaraensis:132

C4M7A5              	100.00%		Q5JDH3              	100.00%
C4M0C6              	90.57%		
C4M7H3              	89.94%		
Bootstrap support for C4M7A5 as seed ortholog is 100%.
Bootstrap support for Q5JDH3 as seed ortholog is 100%.

Group of orthologs #127. Best score 132 bits
Score difference with first non-orthologous sequence - E.histolytica:132 P.kodakaraensis:132

C4M5B7              	100.00%		Q5JE20              	100.00%
Bootstrap support for C4M5B7 as seed ortholog is 100%.
Bootstrap support for Q5JE20 as seed ortholog is 100%.

Group of orthologs #128. Best score 128 bits
Score difference with first non-orthologous sequence - E.histolytica:128 P.kodakaraensis:128

C4LU86              	100.00%		Q5JJG6              	100.00%
C4LWJ4              	100.00%		
Bootstrap support for C4LU86 as seed ortholog is 100%.
Bootstrap support for C4LWJ4 as seed ortholog is 100%.
Bootstrap support for Q5JJG6 as seed ortholog is 100%.

Group of orthologs #129. Best score 128 bits
Score difference with first non-orthologous sequence - E.histolytica:128 P.kodakaraensis:128

C4LXX7              	100.00%		Q5JGJ4              	100.00%
C4M9M7              	96.49%		
Bootstrap support for C4LXX7 as seed ortholog is 100%.
Bootstrap support for Q5JGJ4 as seed ortholog is 100%.

Group of orthologs #130. Best score 128 bits
Score difference with first non-orthologous sequence - E.histolytica:128 P.kodakaraensis:128

C4M5A0              	100.00%		Q5JJD2              	100.00%
Bootstrap support for C4M5A0 as seed ortholog is 100%.
Bootstrap support for Q5JJD2 as seed ortholog is 100%.

Group of orthologs #131. Best score 126 bits
Score difference with first non-orthologous sequence - E.histolytica:126 P.kodakaraensis:126

C4LY44              	100.00%		Q5JIF4              	100.00%
Bootstrap support for C4LY44 as seed ortholog is 100%.
Bootstrap support for Q5JIF4 as seed ortholog is 100%.

Group of orthologs #132. Best score 124 bits
Score difference with first non-orthologous sequence - E.histolytica:124 P.kodakaraensis:124

C4M572              	100.00%		Q5JD70              	100.00%
                    	       		Q5JHN7              	5.45%
Bootstrap support for C4M572 as seed ortholog is 100%.
Bootstrap support for Q5JD70 as seed ortholog is 100%.

Group of orthologs #133. Best score 124 bits
Score difference with first non-orthologous sequence - E.histolytica:124 P.kodakaraensis:124

C4LT02              	100.00%		Q5JDH5              	100.00%
Bootstrap support for C4LT02 as seed ortholog is 100%.
Bootstrap support for Q5JDH5 as seed ortholog is 100%.

Group of orthologs #134. Best score 123 bits
Score difference with first non-orthologous sequence - E.histolytica:123 P.kodakaraensis:123

A7UFC2              	100.00%		Q52366              	100.00%
C4M7H7              	23.33%		
P52653              	23.33%		
Bootstrap support for A7UFC2 as seed ortholog is 100%.
Bootstrap support for Q52366 as seed ortholog is 100%.

Group of orthologs #135. Best score 123 bits
Score difference with first non-orthologous sequence - E.histolytica:123 P.kodakaraensis:66

C4M9H3              	100.00%		Q5JGT2              	100.00%
                    	       		Q5JI45              	38.73%
Bootstrap support for C4M9H3 as seed ortholog is 100%.
Bootstrap support for Q5JGT2 as seed ortholog is 94%.

Group of orthologs #136. Best score 123 bits
Score difference with first non-orthologous sequence - E.histolytica:47 P.kodakaraensis:123

C4LY11              	100.00%		Q5JIQ0              	100.00%
Bootstrap support for C4LY11 as seed ortholog is 90%.
Bootstrap support for Q5JIQ0 as seed ortholog is 100%.

Group of orthologs #137. Best score 123 bits
Score difference with first non-orthologous sequence - E.histolytica:8 P.kodakaraensis:123

C4LZA9              	100.00%		Q5JIR7              	100.00%
Bootstrap support for C4LZA9 as seed ortholog is 61%.
Alternative seed ortholog is C4M182 (8 bits away from this cluster)
Bootstrap support for Q5JIR7 as seed ortholog is 100%.

Group of orthologs #138. Best score 122 bits
Score difference with first non-orthologous sequence - E.histolytica:62 P.kodakaraensis:122

C4M7G5              	100.00%		Q5JHP1              	100.00%
Bootstrap support for C4M7G5 as seed ortholog is 91%.
Bootstrap support for Q5JHP1 as seed ortholog is 100%.

Group of orthologs #139. Best score 121 bits
Score difference with first non-orthologous sequence - E.histolytica:121 P.kodakaraensis:121

Q9U593              	100.00%		Q5JHC8              	100.00%
C4LSC6              	8.79%		Q5JDQ6              	15.07%
Bootstrap support for Q9U593 as seed ortholog is 100%.
Bootstrap support for Q5JHC8 as seed ortholog is 100%.

Group of orthologs #140. Best score 121 bits
Score difference with first non-orthologous sequence - E.histolytica:121 P.kodakaraensis:121

C4M4Y1              	100.00%		Q5JJ64              	100.00%
Bootstrap support for C4M4Y1 as seed ortholog is 100%.
Bootstrap support for Q5JJ64 as seed ortholog is 100%.

Group of orthologs #141. Best score 120 bits
Score difference with first non-orthologous sequence - E.histolytica:120 P.kodakaraensis:120

C4LVL5              	100.00%		Q5JGC8              	100.00%
Bootstrap support for C4LVL5 as seed ortholog is 100%.
Bootstrap support for Q5JGC8 as seed ortholog is 100%.

Group of orthologs #142. Best score 119 bits
Score difference with first non-orthologous sequence - E.histolytica:20 P.kodakaraensis:119

C4LWS2              	100.00%		Q5JIP8              	100.00%
C4M6R1              	66.22%		
C4M1G7              	66.22%		
C4LVY0              	45.98%		
B1N4T4              	29.17%		
Bootstrap support for C4LWS2 as seed ortholog is 71%.
Alternative seed ortholog is C4LZ92 (20 bits away from this cluster)
Bootstrap support for Q5JIP8 as seed ortholog is 100%.

Group of orthologs #143. Best score 119 bits
Score difference with first non-orthologous sequence - E.histolytica:119 P.kodakaraensis:119

C4M169              	100.00%		Q5JDS2              	100.00%
C4M2Z1              	34.84%		
Bootstrap support for C4M169 as seed ortholog is 100%.
Bootstrap support for Q5JDS2 as seed ortholog is 100%.

Group of orthologs #144. Best score 119 bits
Score difference with first non-orthologous sequence - E.histolytica:119 P.kodakaraensis:119

C4LVB0              	100.00%		Q5JJF8              	100.00%
Bootstrap support for C4LVB0 as seed ortholog is 100%.
Bootstrap support for Q5JJF8 as seed ortholog is 100%.

Group of orthologs #145. Best score 117 bits
Score difference with first non-orthologous sequence - E.histolytica:117 P.kodakaraensis:117

C4M2Q1              	100.00%		Q5JGT4              	100.00%
Bootstrap support for C4M2Q1 as seed ortholog is 100%.
Bootstrap support for Q5JGT4 as seed ortholog is 100%.

Group of orthologs #146. Best score 117 bits
Score difference with first non-orthologous sequence - E.histolytica:117 P.kodakaraensis:117

C4M750              	100.00%		Q5JEX8              	100.00%
Bootstrap support for C4M750 as seed ortholog is 100%.
Bootstrap support for Q5JEX8 as seed ortholog is 100%.

Group of orthologs #147. Best score 116 bits
Score difference with first non-orthologous sequence - E.histolytica:116 P.kodakaraensis:116

B1N316              	100.00%		Q5JJE2              	100.00%
C4LZP6              	100.00%		
C4M2R7              	100.00%		
Bootstrap support for B1N316 as seed ortholog is 100%.
Bootstrap support for C4LZP6 as seed ortholog is 100%.
Bootstrap support for C4M2R7 as seed ortholog is 100%.
Bootstrap support for Q5JJE2 as seed ortholog is 100%.

Group of orthologs #148. Best score 116 bits
Score difference with first non-orthologous sequence - E.histolytica:67 P.kodakaraensis:116

C4M764              	100.00%		Q5JE74              	100.00%
C4LYM7              	5.45%		
Bootstrap support for C4M764 as seed ortholog is 99%.
Bootstrap support for Q5JE74 as seed ortholog is 100%.

Group of orthologs #149. Best score 116 bits
Score difference with first non-orthologous sequence - E.histolytica:116 P.kodakaraensis:116

C4LU56              	100.00%		Q5JJG7              	100.00%
Bootstrap support for C4LU56 as seed ortholog is 100%.
Bootstrap support for Q5JJG7 as seed ortholog is 100%.

Group of orthologs #150. Best score 116 bits
Score difference with first non-orthologous sequence - E.histolytica:116 P.kodakaraensis:116

C4LXM0              	100.00%		Q5JJG3              	100.00%
Bootstrap support for C4LXM0 as seed ortholog is 100%.
Bootstrap support for Q5JJG3 as seed ortholog is 100%.

Group of orthologs #151. Best score 116 bits
Score difference with first non-orthologous sequence - E.histolytica:116 P.kodakaraensis:116

C4MA46              	100.00%		Q5JIB9              	100.00%
Bootstrap support for C4MA46 as seed ortholog is 100%.
Bootstrap support for Q5JIB9 as seed ortholog is 100%.

Group of orthologs #152. Best score 115 bits
Score difference with first non-orthologous sequence - E.histolytica:8 P.kodakaraensis:51

C4LSA2              	100.00%		Q5JJ59              	100.00%
B1N2E0              	98.76%		Q5JID9              	6.77%
C4M7Y8              	81.49%		
B1N605              	36.57%		
Bootstrap support for C4LSA2 as seed ortholog is 68%.
Alternative seed ortholog is C4M7A7 (8 bits away from this cluster)
Bootstrap support for Q5JJ59 as seed ortholog is 62%.
Alternative seed ortholog is Q5JER7 (51 bits away from this cluster)

Group of orthologs #153. Best score 113 bits
Score difference with first non-orthologous sequence - E.histolytica:113 P.kodakaraensis:113

C4M0H9              	100.00%		Q5JIZ7              	100.00%
O15635              	100.00%		
Q401L7              	82.23%		
Bootstrap support for C4M0H9 as seed ortholog is 100%.
Bootstrap support for O15635 as seed ortholog is 100%.
Bootstrap support for Q5JIZ7 as seed ortholog is 100%.

Group of orthologs #154. Best score 113 bits
Score difference with first non-orthologous sequence - E.histolytica:113 P.kodakaraensis:113

C4M4I0              	100.00%		Q5JI69              	100.00%
C4M162              	7.74%		
C4LUM3              	5.27%		
Bootstrap support for C4M4I0 as seed ortholog is 100%.
Bootstrap support for Q5JI69 as seed ortholog is 100%.

Group of orthologs #155. Best score 113 bits
Score difference with first non-orthologous sequence - E.histolytica:15 P.kodakaraensis:113

C4LXA6              	100.00%		Q5JDB8              	100.00%
C4MBK7              	10.50%		
Bootstrap support for C4LXA6 as seed ortholog is 76%.
Bootstrap support for Q5JDB8 as seed ortholog is 100%.

Group of orthologs #156. Best score 112 bits
Score difference with first non-orthologous sequence - E.histolytica:66 P.kodakaraensis:112

C4LSK6              	100.00%		Q5JI92              	100.00%
Bootstrap support for C4LSK6 as seed ortholog is 96%.
Bootstrap support for Q5JI92 as seed ortholog is 100%.

Group of orthologs #157. Best score 112 bits
Score difference with first non-orthologous sequence - E.histolytica:112 P.kodakaraensis:112

C4M0V6              	100.00%		Q5JEG3              	100.00%
Bootstrap support for C4M0V6 as seed ortholog is 100%.
Bootstrap support for Q5JEG3 as seed ortholog is 100%.

Group of orthologs #158. Best score 111 bits
Score difference with first non-orthologous sequence - E.histolytica:111 P.kodakaraensis:111

C4M7W2              	100.00%		Q5JI09              	100.00%
C4M8C2              	100.00%		
B1N503              	52.33%		
B1N5J0              	41.09%		
C4LUT1              	26.94%		
Bootstrap support for C4M7W2 as seed ortholog is 100%.
Bootstrap support for C4M8C2 as seed ortholog is 100%.
Bootstrap support for Q5JI09 as seed ortholog is 100%.

Group of orthologs #159. Best score 111 bits
Score difference with first non-orthologous sequence - E.histolytica:111 P.kodakaraensis:111

C4M1I3              	100.00%		Q5JHA8              	100.00%
C4M1F4              	26.24%		Q5JEV4              	59.68%
C4LZY4              	25.40%		
Bootstrap support for C4M1I3 as seed ortholog is 100%.
Bootstrap support for Q5JHA8 as seed ortholog is 100%.

Group of orthologs #160. Best score 111 bits
Score difference with first non-orthologous sequence - E.histolytica:20 P.kodakaraensis:111

C4MAV9              	100.00%		Q5JJC1              	100.00%
C4M2Y7              	57.39%		
C4M7M1              	44.15%		
Bootstrap support for C4MAV9 as seed ortholog is 72%.
Alternative seed ortholog is C4LXG4 (20 bits away from this cluster)
Bootstrap support for Q5JJC1 as seed ortholog is 100%.

Group of orthologs #161. Best score 109 bits
Score difference with first non-orthologous sequence - E.histolytica:109 P.kodakaraensis:109

C4LUA0              	100.00%		Q5JF27              	100.00%
                    	       		Q5JFZ0              	12.64%
Bootstrap support for C4LUA0 as seed ortholog is 100%.
Bootstrap support for Q5JF27 as seed ortholog is 100%.

Group of orthologs #162. Best score 108 bits
Score difference with first non-orthologous sequence - E.histolytica:108 P.kodakaraensis:7

B1N522              	100.00%		Q5JJ96              	100.00%
                    	       		Q5JDU2              	26.58%
                    	       		Q5JJ95              	24.12%
                    	       		Q5JDU1              	15.85%
                    	       		Q5JF59              	5.63%
Bootstrap support for B1N522 as seed ortholog is 100%.
Bootstrap support for Q5JJ96 as seed ortholog is 56%.
Alternative seed ortholog is Q5JDA7 (7 bits away from this cluster)

Group of orthologs #163. Best score 108 bits
Score difference with first non-orthologous sequence - E.histolytica:9 P.kodakaraensis:108

C4LTI2              	100.00%		Q5JDJ9              	100.00%
                    	       		Q5JHL8              	21.75%
Bootstrap support for C4LTI2 as seed ortholog is 63%.
Alternative seed ortholog is C4LZL2 (9 bits away from this cluster)
Bootstrap support for Q5JDJ9 as seed ortholog is 100%.

Group of orthologs #164. Best score 107 bits
Score difference with first non-orthologous sequence - E.histolytica:43 P.kodakaraensis:107

C4LSH8              	100.00%		Q5JIV0              	100.00%
Bootstrap support for C4LSH8 as seed ortholog is 98%.
Bootstrap support for Q5JIV0 as seed ortholog is 100%.

Group of orthologs #165. Best score 106 bits
Score difference with first non-orthologous sequence - E.histolytica:106 P.kodakaraensis:106

B1N5A8              	100.00%		Q5JF30              	100.00%
B1N623              	100.00%		
C4M3Q0              	100.00%		
C4M6Q4              	100.00%		
C4M8W7              	100.00%		
C4MA54              	100.00%		
C4MAR7              	100.00%		
C4MBP3              	100.00%		
B1N5L9              	85.93%		
B1N5Y9              	57.58%		
Bootstrap support for B1N5A8 as seed ortholog is 100%.
Bootstrap support for B1N623 as seed ortholog is 100%.
Bootstrap support for C4M3Q0 as seed ortholog is 100%.
Bootstrap support for C4M6Q4 as seed ortholog is 100%.
Bootstrap support for C4M8W7 as seed ortholog is 100%.
Bootstrap support for C4MA54 as seed ortholog is 100%.
Bootstrap support for C4MAR7 as seed ortholog is 100%.
Bootstrap support for C4MBP3 as seed ortholog is 100%.
Bootstrap support for Q5JF30 as seed ortholog is 100%.

Group of orthologs #166. Best score 105 bits
Score difference with first non-orthologous sequence - E.histolytica:105 P.kodakaraensis:105

B1N3Q9              	100.00%		Q76CZ2              	100.00%
C4M111              	100.00%		
B1N3Y5              	88.34%		
Bootstrap support for B1N3Q9 as seed ortholog is 100%.
Bootstrap support for C4M111 as seed ortholog is 100%.
Bootstrap support for Q76CZ2 as seed ortholog is 100%.

Group of orthologs #167. Best score 105 bits
Score difference with first non-orthologous sequence - E.histolytica:105 P.kodakaraensis:105

C4LSI5              	100.00%		Q5JER0              	100.00%
                    	       		Q5JHB4              	18.24%
Bootstrap support for C4LSI5 as seed ortholog is 100%.
Bootstrap support for Q5JER0 as seed ortholog is 100%.

Group of orthologs #168. Best score 105 bits
Score difference with first non-orthologous sequence - E.histolytica:105 P.kodakaraensis:105

C4M032              	100.00%		Q5JJ65              	100.00%
Bootstrap support for C4M032 as seed ortholog is 100%.
Bootstrap support for Q5JJ65 as seed ortholog is 100%.

Group of orthologs #169. Best score 104 bits
Score difference with first non-orthologous sequence - E.histolytica:104 P.kodakaraensis:104

C4M9R9              	100.00%		Q5JF32              	100.00%
                    	       		Q5JFD3              	43.88%
Bootstrap support for C4M9R9 as seed ortholog is 100%.
Bootstrap support for Q5JF32 as seed ortholog is 100%.

Group of orthologs #170. Best score 104 bits
Score difference with first non-orthologous sequence - E.histolytica:104 P.kodakaraensis:104

C4M4G8              	100.00%		Q5JG59              	100.00%
Bootstrap support for C4M4G8 as seed ortholog is 100%.
Bootstrap support for Q5JG59 as seed ortholog is 100%.

Group of orthologs #171. Best score 104 bits
Score difference with first non-orthologous sequence - E.histolytica:104 P.kodakaraensis:104

C4M6Y9              	100.00%		Q5JIR1              	100.00%
Bootstrap support for C4M6Y9 as seed ortholog is 100%.
Bootstrap support for Q5JIR1 as seed ortholog is 100%.

Group of orthologs #172. Best score 103 bits
Score difference with first non-orthologous sequence - E.histolytica:103 P.kodakaraensis:103

C4LXC4              	100.00%		Q76I93              	100.00%
Bootstrap support for C4LXC4 as seed ortholog is 100%.
Bootstrap support for Q76I93 as seed ortholog is 100%.

Group of orthologs #173. Best score 103 bits
Score difference with first non-orthologous sequence - E.histolytica:20 P.kodakaraensis:103

Q769I7              	100.00%		Q5JIJ0              	100.00%
Bootstrap support for Q769I7 as seed ortholog is 68%.
Alternative seed ortholog is C4LYE2 (20 bits away from this cluster)
Bootstrap support for Q5JIJ0 as seed ortholog is 100%.

Group of orthologs #174. Best score 102 bits
Score difference with first non-orthologous sequence - E.histolytica:48 P.kodakaraensis:102

C4LUW3              	100.00%		Q5JJF2              	100.00%
O15612              	100.00%		
Bootstrap support for C4LUW3 as seed ortholog is 99%.
Bootstrap support for O15612 as seed ortholog is 99%.
Bootstrap support for Q5JJF2 as seed ortholog is 100%.

Group of orthologs #175. Best score 102 bits
Score difference with first non-orthologous sequence - E.histolytica:102 P.kodakaraensis:52

C4LZL5              	100.00%		Q5JDA8              	100.00%
Bootstrap support for C4LZL5 as seed ortholog is 100%.
Bootstrap support for Q5JDA8 as seed ortholog is 92%.

Group of orthologs #176. Best score 102 bits
Score difference with first non-orthologous sequence - E.histolytica:102 P.kodakaraensis:102

C4M0A4              	100.00%		Q5JE49              	100.00%
Bootstrap support for C4M0A4 as seed ortholog is 100%.
Bootstrap support for Q5JE49 as seed ortholog is 100%.

Group of orthologs #177. Best score 101 bits
Score difference with first non-orthologous sequence - E.histolytica:101 P.kodakaraensis:101

C4LVF7              	100.00%		Q5JDW2              	100.00%
C4M4F2              	77.13%		
Bootstrap support for C4LVF7 as seed ortholog is 100%.
Bootstrap support for Q5JDW2 as seed ortholog is 100%.

Group of orthologs #178. Best score 100 bits
Score difference with first non-orthologous sequence - E.histolytica:48 P.kodakaraensis:100

C4LZ69              	100.00%		Q5JGR3              	100.00%
C4M8P0              	93.75%		
Bootstrap support for C4LZ69 as seed ortholog is 99%.
Bootstrap support for Q5JGR3 as seed ortholog is 100%.

Group of orthologs #179. Best score 100 bits
Score difference with first non-orthologous sequence - E.histolytica:100 P.kodakaraensis:100

C4M0E5              	100.00%		Q5JGC0              	100.00%
Bootstrap support for C4M0E5 as seed ortholog is 100%.
Bootstrap support for Q5JGC0 as seed ortholog is 100%.

Group of orthologs #180. Best score 100 bits
Score difference with first non-orthologous sequence - E.histolytica:100 P.kodakaraensis:21

C4M5U7              	100.00%		Q5JJ48              	100.00%
Bootstrap support for C4M5U7 as seed ortholog is 100%.
Bootstrap support for Q5JJ48 as seed ortholog is 71%.
Alternative seed ortholog is Q5JFY9 (21 bits away from this cluster)

Group of orthologs #181. Best score 100 bits
Score difference with first non-orthologous sequence - E.histolytica:100 P.kodakaraensis:18

C4M8M9              	100.00%		Q5JHJ1              	100.00%
Bootstrap support for C4M8M9 as seed ortholog is 100%.
Bootstrap support for Q5JHJ1 as seed ortholog is 68%.
Alternative seed ortholog is Q5JFY9 (18 bits away from this cluster)

Group of orthologs #182. Best score 100 bits
Score difference with first non-orthologous sequence - E.histolytica:100 P.kodakaraensis:100

Q6S4W2              	100.00%		Q5JGT7              	100.00%
Bootstrap support for Q6S4W2 as seed ortholog is 100%.
Bootstrap support for Q5JGT7 as seed ortholog is 100%.

Group of orthologs #183. Best score 99 bits
Score difference with first non-orthologous sequence - E.histolytica:99 P.kodakaraensis:99

C4LTA0              	100.00%		Q5JDI6              	100.00%
B1N5V8              	77.62%		
Bootstrap support for C4LTA0 as seed ortholog is 100%.
Bootstrap support for Q5JDI6 as seed ortholog is 100%.

Group of orthologs #184. Best score 99 bits
Score difference with first non-orthologous sequence - E.histolytica:99 P.kodakaraensis:99

C4LWV1              	100.00%		Q5JET7              	100.00%
Bootstrap support for C4LWV1 as seed ortholog is 100%.
Bootstrap support for Q5JET7 as seed ortholog is 100%.

Group of orthologs #185. Best score 99 bits
Score difference with first non-orthologous sequence - E.histolytica:35 P.kodakaraensis:43

C4LVQ9              	100.00%		Q5JIX4              	100.00%
Bootstrap support for C4LVQ9 as seed ortholog is 85%.
Bootstrap support for Q5JIX4 as seed ortholog is 88%.

Group of orthologs #186. Best score 99 bits
Score difference with first non-orthologous sequence - E.histolytica:99 P.kodakaraensis:99

C4LWU5              	100.00%		Q5JHV7              	100.00%
Bootstrap support for C4LWU5 as seed ortholog is 100%.
Bootstrap support for Q5JHV7 as seed ortholog is 100%.

Group of orthologs #187. Best score 97 bits
Score difference with first non-orthologous sequence - E.histolytica:97 P.kodakaraensis:97

C4LWS0              	100.00%		Q5JGN5              	100.00%
C4MA13              	98.64%		
Bootstrap support for C4LWS0 as seed ortholog is 100%.
Bootstrap support for Q5JGN5 as seed ortholog is 100%.

Group of orthologs #188. Best score 97 bits
Score difference with first non-orthologous sequence - E.histolytica:97 P.kodakaraensis:97

C4M8C4              	100.00%		Q5JGS7              	100.00%
C4M3A1              	62.73%		
Bootstrap support for C4M8C4 as seed ortholog is 100%.
Bootstrap support for Q5JGS7 as seed ortholog is 100%.

Group of orthologs #189. Best score 97 bits
Score difference with first non-orthologous sequence - E.histolytica:97 P.kodakaraensis:97

B1N2I7              	100.00%		Q5JH35              	100.00%
Bootstrap support for B1N2I7 as seed ortholog is 100%.
Bootstrap support for Q5JH35 as seed ortholog is 100%.

Group of orthologs #190. Best score 97 bits
Score difference with first non-orthologous sequence - E.histolytica:97 P.kodakaraensis:97

C4M3R2              	100.00%		Q5JI98              	100.00%
Bootstrap support for C4M3R2 as seed ortholog is 100%.
Bootstrap support for Q5JI98 as seed ortholog is 100%.

Group of orthologs #191. Best score 95 bits
Score difference with first non-orthologous sequence - E.histolytica:95 P.kodakaraensis:95

O96908              	100.00%		Q5JH68              	100.00%
C4LT93              	46.25%		
Bootstrap support for O96908 as seed ortholog is 100%.
Bootstrap support for Q5JH68 as seed ortholog is 100%.

Group of orthologs #192. Best score 93 bits
Score difference with first non-orthologous sequence - E.histolytica:93 P.kodakaraensis:93

C4M1K1              	100.00%		O74035              	100.00%
B1N370              	69.91%		
Bootstrap support for C4M1K1 as seed ortholog is 100%.
Bootstrap support for O74035 as seed ortholog is 100%.

Group of orthologs #193. Best score 93 bits
Score difference with first non-orthologous sequence - E.histolytica:93 P.kodakaraensis:1

C4MA19              	100.00%		Q5JI91              	100.00%
C4M2T5              	23.22%		
Bootstrap support for C4MA19 as seed ortholog is 100%.
Bootstrap support for Q5JI91 as seed ortholog is 45%.
Alternative seed ortholog is Q5JJ98 (1 bits away from this cluster)

Group of orthologs #194. Best score 92 bits
Score difference with first non-orthologous sequence - E.histolytica:92 P.kodakaraensis:92

C4M0S1              	100.00%		Q5JIB6              	100.00%
                    	       		Q5JH42              	23.52%
Bootstrap support for C4M0S1 as seed ortholog is 100%.
Bootstrap support for Q5JIB6 as seed ortholog is 100%.

Group of orthologs #195. Best score 92 bits
Score difference with first non-orthologous sequence - E.histolytica:92 P.kodakaraensis:92

C4M3I0              	100.00%		Q5JH18              	100.00%
C4LWJ2              	64.21%		
Bootstrap support for C4M3I0 as seed ortholog is 100%.
Bootstrap support for Q5JH18 as seed ortholog is 100%.

Group of orthologs #196. Best score 91 bits
Score difference with first non-orthologous sequence - E.histolytica:91 P.kodakaraensis:91

C4LZN2              	100.00%		Q5JEB7              	100.00%
Bootstrap support for C4LZN2 as seed ortholog is 100%.
Bootstrap support for Q5JEB7 as seed ortholog is 100%.

Group of orthologs #197. Best score 90 bits
Score difference with first non-orthologous sequence - E.histolytica:90 P.kodakaraensis:45

C4M793              	100.00%		Q5JIE9              	100.00%
C4MA88              	32.18%		
C4LTE6              	26.88%		
C4M8Y5              	17.11%		
Bootstrap support for C4M793 as seed ortholog is 100%.
Bootstrap support for Q5JIE9 as seed ortholog is 88%.

Group of orthologs #198. Best score 90 bits
Score difference with first non-orthologous sequence - E.histolytica:90 P.kodakaraensis:90

C4LSD9              	100.00%		Q5JIT0              	100.00%
Bootstrap support for C4LSD9 as seed ortholog is 100%.
Bootstrap support for Q5JIT0 as seed ortholog is 100%.

Group of orthologs #199. Best score 90 bits
Score difference with first non-orthologous sequence - E.histolytica:90 P.kodakaraensis:90

C4M1Q8              	100.00%		Q5JHS3              	100.00%
Bootstrap support for C4M1Q8 as seed ortholog is 100%.
Bootstrap support for Q5JHS3 as seed ortholog is 100%.

Group of orthologs #200. Best score 89 bits
Score difference with first non-orthologous sequence - E.histolytica:89 P.kodakaraensis:89

C4LTI8              	100.00%		Q5JJ26              	100.00%
Bootstrap support for C4LTI8 as seed ortholog is 100%.
Bootstrap support for Q5JJ26 as seed ortholog is 100%.

Group of orthologs #201. Best score 89 bits
Score difference with first non-orthologous sequence - E.histolytica:89 P.kodakaraensis:89

C4LYE0              	100.00%		Q5JH21              	100.00%
Bootstrap support for C4LYE0 as seed ortholog is 100%.
Bootstrap support for Q5JH21 as seed ortholog is 100%.

Group of orthologs #202. Best score 89 bits
Score difference with first non-orthologous sequence - E.histolytica:16 P.kodakaraensis:89

C4M0R0              	100.00%		Q5JIA1              	100.00%
Bootstrap support for C4M0R0 as seed ortholog is 74%.
Alternative seed ortholog is C4M659 (16 bits away from this cluster)
Bootstrap support for Q5JIA1 as seed ortholog is 100%.

Group of orthologs #203. Best score 89 bits
Score difference with first non-orthologous sequence - E.histolytica:89 P.kodakaraensis:89

C4M0J3              	100.00%		Q5JJC3              	100.00%
Bootstrap support for C4M0J3 as seed ortholog is 100%.
Bootstrap support for Q5JJC3 as seed ortholog is 100%.

Group of orthologs #204. Best score 87 bits
Score difference with first non-orthologous sequence - E.histolytica:87 P.kodakaraensis:40

C4M030              	100.00%		Q5JF11              	100.00%
Bootstrap support for C4M030 as seed ortholog is 100%.
Bootstrap support for Q5JF11 as seed ortholog is 92%.

Group of orthologs #205. Best score 86 bits
Score difference with first non-orthologous sequence - E.histolytica:86 P.kodakaraensis:86

C4LV64              	100.00%		Q5JDH1              	100.00%
Bootstrap support for C4LV64 as seed ortholog is 100%.
Bootstrap support for Q5JDH1 as seed ortholog is 100%.

Group of orthologs #206. Best score 85 bits
Score difference with first non-orthologous sequence - E.histolytica:85 P.kodakaraensis:85

C4LXZ6              	100.00%		Q5JHC0              	100.00%
                    	       		Q5JHG7              	5.08%
Bootstrap support for C4LXZ6 as seed ortholog is 100%.
Bootstrap support for Q5JHC0 as seed ortholog is 100%.

Group of orthologs #207. Best score 84 bits
Score difference with first non-orthologous sequence - E.histolytica:84 P.kodakaraensis:84

B1N2N4              	100.00%		Q5JHM0              	100.00%
C4LVZ3              	100.00%		Q5JJC2              	15.15%
B1N610              	56.84%		
C4LUI9              	26.54%		
Bootstrap support for B1N2N4 as seed ortholog is 100%.
Bootstrap support for C4LVZ3 as seed ortholog is 100%.
Bootstrap support for Q5JHM0 as seed ortholog is 100%.

Group of orthologs #208. Best score 83 bits
Score difference with first non-orthologous sequence - E.histolytica:83 P.kodakaraensis:83

C4M3F3              	100.00%		Q5JJF6              	100.00%
C4M8M3              	93.09%		
B1N444              	62.16%		
Bootstrap support for C4M3F3 as seed ortholog is 100%.
Bootstrap support for Q5JJF6 as seed ortholog is 100%.

Group of orthologs #209. Best score 83 bits
Score difference with first non-orthologous sequence - E.histolytica:83 P.kodakaraensis:83

C4LY91              	100.00%		Q5JEM6              	100.00%
C4LYM8              	10.02%		
Bootstrap support for C4LY91 as seed ortholog is 100%.
Bootstrap support for Q5JEM6 as seed ortholog is 100%.

Group of orthologs #210. Best score 83 bits
Score difference with first non-orthologous sequence - E.histolytica:83 P.kodakaraensis:83

C4M466              	100.00%		Q5JFZ5              	100.00%
C4M5V7              	100.00%		
Bootstrap support for C4M466 as seed ortholog is 100%.
Bootstrap support for C4M5V7 as seed ortholog is 100%.
Bootstrap support for Q5JFZ5 as seed ortholog is 100%.

Group of orthologs #211. Best score 83 bits
Score difference with first non-orthologous sequence - E.histolytica:83 P.kodakaraensis:83

C4M569              	100.00%		Q5JJF9              	100.00%
C4LSU3              	93.88%		
Bootstrap support for C4M569 as seed ortholog is 100%.
Bootstrap support for Q5JJF9 as seed ortholog is 100%.

Group of orthologs #212. Best score 82 bits
Score difference with first non-orthologous sequence - E.histolytica:82 P.kodakaraensis:82

C4LSD6              	100.00%		Q5JGZ1              	100.00%
C4MA32              	13.11%		Q5JH08              	7.40%
C4M0S2              	6.55%		
C4M099              	6.19%		
Bootstrap support for C4LSD6 as seed ortholog is 100%.
Bootstrap support for Q5JGZ1 as seed ortholog is 100%.

Group of orthologs #213. Best score 82 bits
Score difference with first non-orthologous sequence - E.histolytica:82 P.kodakaraensis:82

C4MAC4              	100.00%		Q5JFW9              	100.00%
C4M818              	95.09%		
B1N3S8              	89.22%		
B1N5J9              	51.76%		
Bootstrap support for C4MAC4 as seed ortholog is 100%.
Bootstrap support for Q5JFW9 as seed ortholog is 100%.

Group of orthologs #214. Best score 82 bits
Score difference with first non-orthologous sequence - E.histolytica:13 P.kodakaraensis:82

C4LZG2              	100.00%		Q5JDG9              	100.00%
Bootstrap support for C4LZG2 as seed ortholog is 60%.
Alternative seed ortholog is C4MAP6 (13 bits away from this cluster)
Bootstrap support for Q5JDG9 as seed ortholog is 100%.

Group of orthologs #215. Best score 82 bits
Score difference with first non-orthologous sequence - E.histolytica:82 P.kodakaraensis:82

C4M1E1              	100.00%		Q5JH34              	100.00%
Bootstrap support for C4M1E1 as seed ortholog is 100%.
Bootstrap support for Q5JH34 as seed ortholog is 100%.

Group of orthologs #216. Best score 82 bits
Score difference with first non-orthologous sequence - E.histolytica:82 P.kodakaraensis:82

Q5U8M9              	100.00%		Q5JFI2              	100.00%
Bootstrap support for Q5U8M9 as seed ortholog is 100%.
Bootstrap support for Q5JFI2 as seed ortholog is 100%.

Group of orthologs #217. Best score 81 bits
Score difference with first non-orthologous sequence - E.histolytica:81 P.kodakaraensis:81

C4LX05              	100.00%		Q5JDH4              	100.00%
C4M0M6              	100.00%		
C4M2J3              	100.00%		
Bootstrap support for C4LX05 as seed ortholog is 100%.
Bootstrap support for C4M0M6 as seed ortholog is 100%.
Bootstrap support for C4M2J3 as seed ortholog is 100%.
Bootstrap support for Q5JDH4 as seed ortholog is 100%.

Group of orthologs #218. Best score 81 bits
Score difference with first non-orthologous sequence - E.histolytica:81 P.kodakaraensis:81

C4LW92              	100.00%		Q5JDH9              	100.00%
C4M979              	100.00%		
Bootstrap support for C4LW92 as seed ortholog is 100%.
Bootstrap support for C4M979 as seed ortholog is 100%.
Bootstrap support for Q5JDH9 as seed ortholog is 100%.

Group of orthologs #219. Best score 81 bits
Score difference with first non-orthologous sequence - E.histolytica:81 P.kodakaraensis:81

C4LVL2              	100.00%		Q5JF75              	100.00%
Bootstrap support for C4LVL2 as seed ortholog is 100%.
Bootstrap support for Q5JF75 as seed ortholog is 100%.

Group of orthologs #220. Best score 80 bits
Score difference with first non-orthologous sequence - E.histolytica:80 P.kodakaraensis:80

C4LSZ3              	100.00%		Q5JDM6              	100.00%
C4M0M9              	97.35%		
Bootstrap support for C4LSZ3 as seed ortholog is 100%.
Bootstrap support for Q5JDM6 as seed ortholog is 100%.

Group of orthologs #221. Best score 80 bits
Score difference with first non-orthologous sequence - E.histolytica:80 P.kodakaraensis:80

C4MB76              	100.00%		Q5JGC6              	100.00%
B1N3S0              	89.50%		
Bootstrap support for C4MB76 as seed ortholog is 100%.
Bootstrap support for Q5JGC6 as seed ortholog is 100%.

Group of orthologs #222. Best score 79 bits
Score difference with first non-orthologous sequence - E.histolytica:79 P.kodakaraensis:79

Q70S43              	100.00%		Q5JI34              	100.00%
C4LVQ3              	58.32%		
Bootstrap support for Q70S43 as seed ortholog is 100%.
Bootstrap support for Q5JI34 as seed ortholog is 100%.

Group of orthologs #223. Best score 79 bits
Score difference with first non-orthologous sequence - E.histolytica:79 P.kodakaraensis:79

C4LTQ7              	100.00%		Q5JG15              	100.00%
Bootstrap support for C4LTQ7 as seed ortholog is 100%.
Bootstrap support for Q5JG15 as seed ortholog is 100%.

Group of orthologs #224. Best score 79 bits
Score difference with first non-orthologous sequence - E.histolytica:79 P.kodakaraensis:79

C4LUR5              	100.00%		Q5JJC7              	100.00%
Bootstrap support for C4LUR5 as seed ortholog is 100%.
Bootstrap support for Q5JJC7 as seed ortholog is 100%.

Group of orthologs #225. Best score 78 bits
Score difference with first non-orthologous sequence - E.histolytica:78 P.kodakaraensis:78

B1N386              	100.00%		Q5JHE8              	100.00%
C4M0F0              	100.00%		
Bootstrap support for B1N386 as seed ortholog is 100%.
Bootstrap support for C4M0F0 as seed ortholog is 100%.
Bootstrap support for Q5JHE8 as seed ortholog is 100%.

Group of orthologs #226. Best score 78 bits
Score difference with first non-orthologous sequence - E.histolytica:78 P.kodakaraensis:78

C4LTQ5              	100.00%		Q5JGM4              	100.00%
C4M609              	100.00%		
Bootstrap support for C4LTQ5 as seed ortholog is 100%.
Bootstrap support for C4M609 as seed ortholog is 100%.
Bootstrap support for Q5JGM4 as seed ortholog is 100%.

Group of orthologs #227. Best score 78 bits
Score difference with first non-orthologous sequence - E.histolytica:78 P.kodakaraensis:78

C4M803              	100.00%		Q5JFK7              	100.00%
C4LTZ0              	32.58%		
Bootstrap support for C4M803 as seed ortholog is 100%.
Bootstrap support for Q5JFK7 as seed ortholog is 100%.

Group of orthologs #228. Best score 78 bits
Score difference with first non-orthologous sequence - E.histolytica:24 P.kodakaraensis:78

C4M8P1              	100.00%		Q5JF34              	100.00%
Bootstrap support for C4M8P1 as seed ortholog is 83%.
Bootstrap support for Q5JF34 as seed ortholog is 100%.

Group of orthologs #229. Best score 77 bits
Score difference with first non-orthologous sequence - E.histolytica:77 P.kodakaraensis:77

C4LVG2              	100.00%		Q5JH94              	100.00%
C4M6J0              	10.14%		
C4M529              	8.51%		
Bootstrap support for C4LVG2 as seed ortholog is 100%.
Bootstrap support for Q5JH94 as seed ortholog is 100%.

Group of orthologs #230. Best score 77 bits
Score difference with first non-orthologous sequence - E.histolytica:77 P.kodakaraensis:77

C4M1J2              	100.00%		Q5JG26              	100.00%
Bootstrap support for C4M1J2 as seed ortholog is 100%.
Bootstrap support for Q5JG26 as seed ortholog is 100%.

Group of orthologs #231. Best score 77 bits
Score difference with first non-orthologous sequence - E.histolytica:26 P.kodakaraensis:77

C4M3T2              	100.00%		Q5JIR5              	100.00%
Bootstrap support for C4M3T2 as seed ortholog is 81%.
Bootstrap support for Q5JIR5 as seed ortholog is 100%.

Group of orthologs #232. Best score 77 bits
Score difference with first non-orthologous sequence - E.histolytica:77 P.kodakaraensis:77

C4M554              	100.00%		Q5JJF4              	100.00%
Bootstrap support for C4M554 as seed ortholog is 100%.
Bootstrap support for Q5JJF4 as seed ortholog is 100%.

Group of orthologs #233. Best score 76 bits
Score difference with first non-orthologous sequence - E.histolytica:76 P.kodakaraensis:76

C4LXZ5              	100.00%		O52958              	100.00%
C4M0M2              	46.91%		
Bootstrap support for C4LXZ5 as seed ortholog is 100%.
Bootstrap support for O52958 as seed ortholog is 100%.

Group of orthologs #234. Best score 76 bits
Score difference with first non-orthologous sequence - E.histolytica:76 P.kodakaraensis:76

C4M3A8              	100.00%		Q5JH93              	100.00%
Bootstrap support for C4M3A8 as seed ortholog is 100%.
Bootstrap support for Q5JH93 as seed ortholog is 100%.

Group of orthologs #235. Best score 75 bits
Score difference with first non-orthologous sequence - E.histolytica:75 P.kodakaraensis:75

C4LWF1              	100.00%		Q5JDZ9              	100.00%
                    	       		Q5JFM9              	100.00%
                    	       		Q5JF43              	12.85%
Bootstrap support for C4LWF1 as seed ortholog is 100%.
Bootstrap support for Q5JDZ9 as seed ortholog is 100%.
Bootstrap support for Q5JFM9 as seed ortholog is 100%.

Group of orthologs #236. Best score 75 bits
Score difference with first non-orthologous sequence - E.histolytica:75 P.kodakaraensis:75

C4LT83              	100.00%		Q5JI44              	100.00%
Bootstrap support for C4LT83 as seed ortholog is 100%.
Bootstrap support for Q5JI44 as seed ortholog is 100%.

Group of orthologs #237. Best score 75 bits
Score difference with first non-orthologous sequence - E.histolytica:75 P.kodakaraensis:75

C4M982              	100.00%		Q5JIY3              	100.00%
Bootstrap support for C4M982 as seed ortholog is 100%.
Bootstrap support for Q5JIY3 as seed ortholog is 100%.

Group of orthologs #238. Best score 74 bits
Score difference with first non-orthologous sequence - E.histolytica:74 P.kodakaraensis:74

C4LSN2              	100.00%		Q5JDB7              	100.00%
C4M9D2              	8.99%		
Bootstrap support for C4LSN2 as seed ortholog is 100%.
Bootstrap support for Q5JDB7 as seed ortholog is 100%.

Group of orthologs #239. Best score 74 bits
Score difference with first non-orthologous sequence - E.histolytica:3 P.kodakaraensis:74

C4LVP0              	100.00%		Q5JHP6              	100.00%
C4M0A1              	40.00%		
Bootstrap support for C4LVP0 as seed ortholog is 52%.
Alternative seed ortholog is C4LZF4 (3 bits away from this cluster)
Bootstrap support for Q5JHP6 as seed ortholog is 100%.

Group of orthologs #240. Best score 74 bits
Score difference with first non-orthologous sequence - E.histolytica:74 P.kodakaraensis:74

C4LZ47              	100.00%		Q5JGR7              	100.00%
Bootstrap support for C4LZ47 as seed ortholog is 100%.
Bootstrap support for Q5JGR7 as seed ortholog is 100%.

Group of orthologs #241. Best score 74 bits
Score difference with first non-orthologous sequence - E.histolytica:74 P.kodakaraensis:74

C4MB82              	100.00%		Q5JCY8              	100.00%
Bootstrap support for C4MB82 as seed ortholog is 100%.
Bootstrap support for Q5JCY8 as seed ortholog is 100%.

Group of orthologs #242. Best score 73 bits
Score difference with first non-orthologous sequence - E.histolytica:73 P.kodakaraensis:73

C4M8W3              	100.00%		Q5JGZ3              	100.00%
C4M346              	24.61%		
C4LU25              	24.47%		
Bootstrap support for C4M8W3 as seed ortholog is 100%.
Bootstrap support for Q5JGZ3 as seed ortholog is 100%.

Group of orthologs #243. Best score 72 bits
Score difference with first non-orthologous sequence - E.histolytica:72 P.kodakaraensis:72

C4LU83              	100.00%		Q5JD96              	100.00%
C4LWJ3              	65.92%		
C4M4J0              	20.53%		
C4M3B7              	6.05%		
Bootstrap support for C4LU83 as seed ortholog is 100%.
Bootstrap support for Q5JD96 as seed ortholog is 100%.

Group of orthologs #244. Best score 72 bits
Score difference with first non-orthologous sequence - E.histolytica:72 P.kodakaraensis:72

C4LT96              	100.00%		Q5JJG5              	100.00%
C4LV05              	100.00%		
C4M2W1              	100.00%		
Bootstrap support for C4LT96 as seed ortholog is 100%.
Bootstrap support for C4LV05 as seed ortholog is 100%.
Bootstrap support for C4M2W1 as seed ortholog is 100%.
Bootstrap support for Q5JJG5 as seed ortholog is 100%.

Group of orthologs #245. Best score 72 bits
Score difference with first non-orthologous sequence - E.histolytica:72 P.kodakaraensis:72

C4M5M4              	100.00%		Q5JJC9              	100.00%
Bootstrap support for C4M5M4 as seed ortholog is 100%.
Bootstrap support for Q5JJC9 as seed ortholog is 100%.

Group of orthologs #246. Best score 71 bits
Score difference with first non-orthologous sequence - E.histolytica:71 P.kodakaraensis:71

C4LSS0              	100.00%		Q5JFS0              	100.00%
                    	       		Q5JI38              	11.25%
Bootstrap support for C4LSS0 as seed ortholog is 100%.
Bootstrap support for Q5JFS0 as seed ortholog is 100%.

Group of orthologs #247. Best score 70 bits
Score difference with first non-orthologous sequence - E.histolytica:70 P.kodakaraensis:70

C4LTP6              	100.00%		Q5JFY8              	100.00%
C4LU47              	28.88%		
Bootstrap support for C4LTP6 as seed ortholog is 100%.
Bootstrap support for Q5JFY8 as seed ortholog is 100%.

Group of orthologs #248. Best score 69 bits
Score difference with first non-orthologous sequence - E.histolytica:69 P.kodakaraensis:69

C4M5S9              	100.00%		Q5JDB1              	100.00%
B1N3E8              	82.41%		
Bootstrap support for C4M5S9 as seed ortholog is 100%.
Bootstrap support for Q5JDB1 as seed ortholog is 100%.

Group of orthologs #249. Best score 69 bits
Score difference with first non-orthologous sequence - E.histolytica:13 P.kodakaraensis:69

C4LW47              	100.00%		Q5JH80              	100.00%
Bootstrap support for C4LW47 as seed ortholog is 72%.
Alternative seed ortholog is C4M003 (13 bits away from this cluster)
Bootstrap support for Q5JH80 as seed ortholog is 100%.

Group of orthologs #250. Best score 68 bits
Score difference with first non-orthologous sequence - E.histolytica:68 P.kodakaraensis:68

C4M2I8              	100.00%		Q5JFH5              	100.00%
                    	       		Q5JHR1              	5.41%
Bootstrap support for C4M2I8 as seed ortholog is 100%.
Bootstrap support for Q5JFH5 as seed ortholog is 100%.

Group of orthologs #251. Best score 68 bits
Score difference with first non-orthologous sequence - E.histolytica:68 P.kodakaraensis:68

C4M919              	100.00%		Q5JE35              	100.00%
C4LZZ0              	96.55%		
Bootstrap support for C4M919 as seed ortholog is 100%.
Bootstrap support for Q5JE35 as seed ortholog is 100%.

Group of orthologs #252. Best score 68 bits
Score difference with first non-orthologous sequence - E.histolytica:68 P.kodakaraensis:68

C4LXS0              	100.00%		Q5JFY3              	100.00%
Bootstrap support for C4LXS0 as seed ortholog is 100%.
Bootstrap support for Q5JFY3 as seed ortholog is 100%.

Group of orthologs #253. Best score 67 bits
Score difference with first non-orthologous sequence - E.histolytica:67 P.kodakaraensis:67

B1N3Y4              	100.00%		Q5JI47              	100.00%
C4MB41              	100.00%		
B1N540              	99.76%		
C4M7D7              	98.82%		
C4M9Q8              	97.41%		
C4M109              	97.18%		
C4MBB6              	96.94%		
Bootstrap support for B1N3Y4 as seed ortholog is 100%.
Bootstrap support for C4MB41 as seed ortholog is 100%.
Bootstrap support for Q5JI47 as seed ortholog is 100%.

Group of orthologs #254. Best score 67 bits
Score difference with first non-orthologous sequence - E.histolytica:67 P.kodakaraensis:67

C4M7Z4              	100.00%		Q5JIC9              	100.00%
                    	       		Q5JHD3              	5.28%
Bootstrap support for C4M7Z4 as seed ortholog is 100%.
Bootstrap support for Q5JIC9 as seed ortholog is 100%.

Group of orthologs #255. Best score 67 bits
Score difference with first non-orthologous sequence - E.histolytica:67 P.kodakaraensis:67

Q9BI08              	100.00%		Q5JDC4              	100.00%
Bootstrap support for Q9BI08 as seed ortholog is 100%.
Bootstrap support for Q5JDC4 as seed ortholog is 100%.

Group of orthologs #256. Best score 66 bits
Score difference with first non-orthologous sequence - E.histolytica:3 P.kodakaraensis:66

C4M9C5              	100.00%		Q5JJE5              	100.00%
C4M1S7              	14.41%		
C4M9X1              	6.26%		
Bootstrap support for C4M9C5 as seed ortholog is 53%.
Alternative seed ortholog is C4LZ04 (3 bits away from this cluster)
Bootstrap support for Q5JJE5 as seed ortholog is 100%.

Group of orthologs #257. Best score 65 bits
Score difference with first non-orthologous sequence - E.histolytica:65 P.kodakaraensis:65

C4LV37              	100.00%		Q5JDS0              	100.00%
C4LV36              	47.01%		
Bootstrap support for C4LV37 as seed ortholog is 100%.
Bootstrap support for Q5JDS0 as seed ortholog is 100%.

Group of orthologs #258. Best score 65 bits
Score difference with first non-orthologous sequence - E.histolytica:65 P.kodakaraensis:65

C4LZQ8              	100.00%		Q5JGR4              	100.00%
C4M059              	100.00%		
Bootstrap support for C4LZQ8 as seed ortholog is 100%.
Bootstrap support for C4M059 as seed ortholog is 100%.
Bootstrap support for Q5JGR4 as seed ortholog is 100%.

Group of orthologs #259. Best score 65 bits
Score difference with first non-orthologous sequence - E.histolytica:65 P.kodakaraensis:65

C4M2V6              	100.00%		Q5JHB2              	100.00%
Bootstrap support for C4M2V6 as seed ortholog is 100%.
Bootstrap support for Q5JHB2 as seed ortholog is 100%.

Group of orthologs #260. Best score 64 bits
Score difference with first non-orthologous sequence - E.histolytica:64 P.kodakaraensis:64

C4LWS6              	100.00%		Q5JHT4              	100.00%
Bootstrap support for C4LWS6 as seed ortholog is 100%.
Bootstrap support for Q5JHT4 as seed ortholog is 100%.

Group of orthologs #261. Best score 64 bits
Score difference with first non-orthologous sequence - E.histolytica:64 P.kodakaraensis:64

C4LYN6              	100.00%		Q5JH70              	100.00%
Bootstrap support for C4LYN6 as seed ortholog is 100%.
Bootstrap support for Q5JH70 as seed ortholog is 100%.

Group of orthologs #262. Best score 64 bits
Score difference with first non-orthologous sequence - E.histolytica:64 P.kodakaraensis:64

C4M472              	100.00%		Q5JH10              	100.00%
Bootstrap support for C4M472 as seed ortholog is 100%.
Bootstrap support for Q5JH10 as seed ortholog is 100%.

Group of orthologs #263. Best score 63 bits
Score difference with first non-orthologous sequence - E.histolytica:63 P.kodakaraensis:63

C4M5J8              	100.00%		Q5JGM0              	100.00%
Bootstrap support for C4M5J8 as seed ortholog is 100%.
Bootstrap support for Q5JGM0 as seed ortholog is 100%.

Group of orthologs #264. Best score 62 bits
Score difference with first non-orthologous sequence - E.histolytica:62 P.kodakaraensis:62

C4LTZ5              	100.00%		Q5JEU9              	100.00%
C4M6W0              	26.88%		
C4LXZ8              	10.62%		
C4MAX0              	7.29%		
Bootstrap support for C4LTZ5 as seed ortholog is 100%.
Bootstrap support for Q5JEU9 as seed ortholog is 100%.

Group of orthologs #265. Best score 62 bits
Score difference with first non-orthologous sequence - E.histolytica:62 P.kodakaraensis:62

B1N3F8              	100.00%		Q5JJH0              	100.00%
B1N420              	100.00%		
C4M7V3              	87.45%		
Bootstrap support for B1N3F8 as seed ortholog is 100%.
Bootstrap support for B1N420 as seed ortholog is 100%.
Bootstrap support for Q5JJH0 as seed ortholog is 100%.

Group of orthologs #266. Best score 62 bits
Score difference with first non-orthologous sequence - E.histolytica:62 P.kodakaraensis:62

C4LYI2              	100.00%		Q5JIU7              	100.00%
                    	       		Q5JI19              	18.99%
Bootstrap support for C4LYI2 as seed ortholog is 100%.
Bootstrap support for Q5JIU7 as seed ortholog is 100%.

Group of orthologs #267. Best score 62 bits
Score difference with first non-orthologous sequence - E.histolytica:62 P.kodakaraensis:62

C4LS99              	100.00%		Q5JE51              	100.00%
Bootstrap support for C4LS99 as seed ortholog is 100%.
Bootstrap support for Q5JE51 as seed ortholog is 100%.

Group of orthologs #268. Best score 62 bits
Score difference with first non-orthologous sequence - E.histolytica:62 P.kodakaraensis:62

C4LSN1              	100.00%		Q5JEW5              	100.00%
Bootstrap support for C4LSN1 as seed ortholog is 100%.
Bootstrap support for Q5JEW5 as seed ortholog is 100%.

Group of orthologs #269. Best score 62 bits
Score difference with first non-orthologous sequence - E.histolytica:62 P.kodakaraensis:62

C4M624              	100.00%		Q5JH82              	100.00%
Bootstrap support for C4M624 as seed ortholog is 100%.
Bootstrap support for Q5JH82 as seed ortholog is 100%.

Group of orthologs #270. Best score 61 bits
Score difference with first non-orthologous sequence - E.histolytica:61 P.kodakaraensis:61

C4M6M9              	100.00%		Q5JIP5              	100.00%
Bootstrap support for C4M6M9 as seed ortholog is 100%.
Bootstrap support for Q5JIP5 as seed ortholog is 100%.

Group of orthologs #271. Best score 59 bits
Score difference with first non-orthologous sequence - E.histolytica:59 P.kodakaraensis:59

C4MA09              	100.00%		Q5JJG9              	100.00%
C4M938              	97.73%		
C4M751              	96.21%		
C4LYV2              	95.71%		
Bootstrap support for C4MA09 as seed ortholog is 100%.
Bootstrap support for Q5JJG9 as seed ortholog is 100%.

Group of orthologs #272. Best score 59 bits
Score difference with first non-orthologous sequence - E.histolytica:59 P.kodakaraensis:59

C4M0S8              	100.00%		Q5JJ72              	100.00%
C4LVJ7              	38.40%		
Bootstrap support for C4M0S8 as seed ortholog is 100%.
Bootstrap support for Q5JJ72 as seed ortholog is 100%.

Group of orthologs #273. Best score 59 bits
Score difference with first non-orthologous sequence - E.histolytica:59 P.kodakaraensis:59

C4M3W8              	100.00%		Q5JHT3              	100.00%
Bootstrap support for C4M3W8 as seed ortholog is 100%.
Bootstrap support for Q5JHT3 as seed ortholog is 100%.

Group of orthologs #274. Best score 58 bits
Score difference with first non-orthologous sequence - E.histolytica:58 P.kodakaraensis:58

C4M9J9              	100.00%		Q5JEZ3              	100.00%
B1N4L6              	100.00%		
C4M4T8              	13.10%		
C4M7H8              	12.68%		
C4M0Z9              	5.66%		
Bootstrap support for C4M9J9 as seed ortholog is 100%.
Bootstrap support for B1N4L6 as seed ortholog is 100%.
Bootstrap support for Q5JEZ3 as seed ortholog is 100%.

Group of orthologs #275. Best score 58 bits
Score difference with first non-orthologous sequence - E.histolytica:58 P.kodakaraensis:58

C4LVN8              	100.00%		Q5JI42              	100.00%
C4LSM2              	94.70%		
C4LY49              	31.06%		
C4LSJ5              	30.68%		
Bootstrap support for C4LVN8 as seed ortholog is 100%.
Bootstrap support for Q5JI42 as seed ortholog is 100%.

Group of orthologs #276. Best score 58 bits
Score difference with first non-orthologous sequence - E.histolytica:58 P.kodakaraensis:58

C4M0Z2              	100.00%		Q5JDC7              	100.00%
C4M7N8              	100.00%		
C4M0P7              	98.85%		
Bootstrap support for C4M0Z2 as seed ortholog is 100%.
Bootstrap support for C4M7N8 as seed ortholog is 100%.
Bootstrap support for Q5JDC7 as seed ortholog is 100%.

Group of orthologs #277. Best score 57 bits
Score difference with first non-orthologous sequence - E.histolytica:57 P.kodakaraensis:57

C4LZT5              	100.00%		Q5JG48              	100.00%
C4M1Z1              	34.91%		
C4LZU5              	22.73%		
C4M8D5              	22.44%		
C4LSN3              	18.57%		
C4M8I5              	17.99%		
C4M615              	15.76%		
Bootstrap support for C4LZT5 as seed ortholog is 100%.
Bootstrap support for Q5JG48 as seed ortholog is 100%.

Group of orthologs #278. Best score 57 bits
Score difference with first non-orthologous sequence - E.histolytica:57 P.kodakaraensis:57

C4LXH0              	100.00%		Q5JFQ9              	100.00%
                    	       		Q5JI97              	9.41%
                    	       		Q5JJ02              	5.22%
Bootstrap support for C4LXH0 as seed ortholog is 100%.
Bootstrap support for Q5JFQ9 as seed ortholog is 100%.

Group of orthologs #279. Best score 57 bits
Score difference with first non-orthologous sequence - E.histolytica:57 P.kodakaraensis:57

Q8MZU6              	100.00%		Q5JEA0              	100.00%
C4M7B0              	37.61%		
C4M4U3              	35.90%		
Bootstrap support for Q8MZU6 as seed ortholog is 100%.
Bootstrap support for Q5JEA0 as seed ortholog is 100%.

Group of orthologs #280. Best score 56 bits
Score difference with first non-orthologous sequence - E.histolytica:56 P.kodakaraensis:56

C4LWU3              	100.00%		Q5JGN3              	100.00%
Bootstrap support for C4LWU3 as seed ortholog is 100%.
Bootstrap support for Q5JGN3 as seed ortholog is 100%.

Group of orthologs #281. Best score 56 bits
Score difference with first non-orthologous sequence - E.histolytica:56 P.kodakaraensis:56

C4LW10              	100.00%		Q5JJG2              	100.00%
Bootstrap support for C4LW10 as seed ortholog is 100%.
Bootstrap support for Q5JJG2 as seed ortholog is 100%.

Group of orthologs #282. Best score 56 bits
Score difference with first non-orthologous sequence - E.histolytica:56 P.kodakaraensis:56

C4M1U6              	100.00%		Q5JGM7              	100.00%
Bootstrap support for C4M1U6 as seed ortholog is 100%.
Bootstrap support for Q5JGM7 as seed ortholog is 100%.

Group of orthologs #283. Best score 56 bits
Score difference with first non-orthologous sequence - E.histolytica:56 P.kodakaraensis:56

C4M6U8              	100.00%		Q5JDA4              	100.00%
Bootstrap support for C4M6U8 as seed ortholog is 100%.
Bootstrap support for Q5JDA4 as seed ortholog is 100%.

Group of orthologs #284. Best score 56 bits
Score difference with first non-orthologous sequence - E.histolytica:56 P.kodakaraensis:56

C4M9Y2              	100.00%		Q5JE48              	100.00%
Bootstrap support for C4M9Y2 as seed ortholog is 100%.
Bootstrap support for Q5JE48 as seed ortholog is 100%.

Group of orthologs #285. Best score 55 bits
Score difference with first non-orthologous sequence - E.histolytica:55 P.kodakaraensis:55

C4M0X0              	100.00%		Q5JIE1              	100.00%
B1N601              	53.04%		
Bootstrap support for C4M0X0 as seed ortholog is 100%.
Bootstrap support for Q5JIE1 as seed ortholog is 100%.

Group of orthologs #286. Best score 55 bits
Score difference with first non-orthologous sequence - E.histolytica:55 P.kodakaraensis:55

C4M924              	100.00%		Q5JIX8              	100.00%
                    	       		Q5JJF0              	5.52%
Bootstrap support for C4M924 as seed ortholog is 100%.
Bootstrap support for Q5JIX8 as seed ortholog is 100%.

Group of orthologs #287. Best score 54 bits
Score difference with first non-orthologous sequence - E.histolytica:54 P.kodakaraensis:54

C4LTW8              	100.00%		P58109              	100.00%
C4M8X8              	6.53%		Q5JGN1              	64.67%
Bootstrap support for C4LTW8 as seed ortholog is 100%.
Bootstrap support for P58109 as seed ortholog is 100%.

Group of orthologs #288. Best score 54 bits
Score difference with first non-orthologous sequence - E.histolytica:13 P.kodakaraensis:54

C4LSH4              	100.00%		Q5JIE0              	100.00%
Bootstrap support for C4LSH4 as seed ortholog is 80%.
Bootstrap support for Q5JIE0 as seed ortholog is 100%.

Group of orthologs #289. Best score 53 bits
Score difference with first non-orthologous sequence - E.histolytica:53 P.kodakaraensis:53

C4LWR3              	100.00%		Q5JE28              	100.00%
Bootstrap support for C4LWR3 as seed ortholog is 100%.
Bootstrap support for Q5JE28 as seed ortholog is 100%.

Group of orthologs #290. Best score 52 bits
Score difference with first non-orthologous sequence - E.histolytica:52 P.kodakaraensis:52

C4MA15              	100.00%		Q5JD61              	100.00%
C4LUT0              	80.38%		Q5JEG7              	10.94%
C4M301              	37.08%		Q5JG46              	9.92%
C4LU14              	5.26%		
Bootstrap support for C4MA15 as seed ortholog is 100%.
Bootstrap support for Q5JD61 as seed ortholog is 100%.

Group of orthologs #291. Best score 52 bits
Score difference with first non-orthologous sequence - E.histolytica:52 P.kodakaraensis:52

C4LT66              	100.00%		Q5JE50              	100.00%
C4LYP4              	100.00%		
C4LSR1              	96.85%		
Bootstrap support for C4LT66 as seed ortholog is 100%.
Bootstrap support for C4LYP4 as seed ortholog is 100%.
Bootstrap support for Q5JE50 as seed ortholog is 100%.

Group of orthologs #292. Best score 51 bits
Score difference with first non-orthologous sequence - E.histolytica:51 P.kodakaraensis:51

C4LXS9              	100.00%		Q5JE88              	100.00%
Bootstrap support for C4LXS9 as seed ortholog is 100%.
Bootstrap support for Q5JE88 as seed ortholog is 100%.

Group of orthologs #293. Best score 50 bits
Score difference with first non-orthologous sequence - E.histolytica:50 P.kodakaraensis:50

C4LXT1              	100.00%		Q5JIE3              	100.00%
C4LW86              	8.02%		Q5JE63              	5.29%
Bootstrap support for C4LXT1 as seed ortholog is 100%.
Bootstrap support for Q5JIE3 as seed ortholog is 100%.

Group of orthologs #294. Best score 50 bits
Score difference with first non-orthologous sequence - E.histolytica:50 P.kodakaraensis:50

C4LYD1              	100.00%		Q5JIR4              	100.00%
Bootstrap support for C4LYD1 as seed ortholog is 100%.
Bootstrap support for Q5JIR4 as seed ortholog is 100%.

Group of orthologs #295. Best score 48 bits
Score difference with first non-orthologous sequence - E.histolytica:48 P.kodakaraensis:48

C4LV03              	100.00%		Q5JHP5              	100.00%
Bootstrap support for C4LV03 as seed ortholog is 100%.
Bootstrap support for Q5JHP5 as seed ortholog is 100%.

Group of orthologs #296. Best score 47 bits
Score difference with first non-orthologous sequence - E.histolytica:4 P.kodakaraensis:47

C4LVX4              	100.00%		Q5JFY7              	100.00%
C4M214              	12.92%		
Bootstrap support for C4LVX4 as seed ortholog is 57%.
Alternative seed ortholog is C4M1A9 (4 bits away from this cluster)
Bootstrap support for Q5JFY7 as seed ortholog is 100%.

Group of orthologs #297. Best score 47 bits
Score difference with first non-orthologous sequence - E.histolytica:47 P.kodakaraensis:47

C4M1A7              	100.00%		Q5JEC0              	100.00%
                    	       		Q5JHM7              	35.00%
Bootstrap support for C4M1A7 as seed ortholog is 100%.
Bootstrap support for Q5JEC0 as seed ortholog is 100%.

Group of orthologs #298. Best score 47 bits
Score difference with first non-orthologous sequence - E.histolytica:47 P.kodakaraensis:47

C4M2E5              	100.00%		Q5JIK7              	100.00%
C4MB17              	100.00%		
Bootstrap support for C4M2E5 as seed ortholog is 100%.
Bootstrap support for C4MB17 as seed ortholog is 100%.
Bootstrap support for Q5JIK7 as seed ortholog is 100%.

Group of orthologs #299. Best score 47 bits
Score difference with first non-orthologous sequence - E.histolytica:47 P.kodakaraensis:47

C4M549              	100.00%		Q5JIY8              	100.00%
C4LT49              	98.73%		
Bootstrap support for C4M549 as seed ortholog is 100%.
Bootstrap support for Q5JIY8 as seed ortholog is 100%.

Group of orthologs #300. Best score 47 bits
Score difference with first non-orthologous sequence - E.histolytica:47 P.kodakaraensis:47

C4MA17              	100.00%		Q5JFS7              	100.00%
                    	       		Q5JF29              	36.75%
Bootstrap support for C4MA17 as seed ortholog is 100%.
Bootstrap support for Q5JFS7 as seed ortholog is 100%.

Group of orthologs #301. Best score 47 bits
Score difference with first non-orthologous sequence - E.histolytica:47 P.kodakaraensis:47

C4LTA2              	100.00%		Q5JGT6              	100.00%
Bootstrap support for C4LTA2 as seed ortholog is 100%.
Bootstrap support for Q5JGT6 as seed ortholog is 100%.

Group of orthologs #302. Best score 46 bits
Score difference with first non-orthologous sequence - E.histolytica:46 P.kodakaraensis:46

C4M2I0              	100.00%		Q5JIC4              	100.00%
C4LYT2              	74.66%		
C4M2H9              	72.40%		
C4LWF4              	10.86%		
C4M726              	8.60%		
C4M1D3              	7.69%		
B1N4L5              	7.24%		
C4MAS3              	7.24%		
Bootstrap support for C4M2I0 as seed ortholog is 100%.
Bootstrap support for Q5JIC4 as seed ortholog is 100%.

Group of orthologs #303. Best score 46 bits
Score difference with first non-orthologous sequence - E.histolytica:46 P.kodakaraensis:46

C4LVC3              	100.00%		Q5JF36              	100.00%
C4LSU9              	26.53%		
C4M0P4              	21.54%		
C4M6X4              	18.82%		
Bootstrap support for C4LVC3 as seed ortholog is 100%.
Bootstrap support for Q5JF36 as seed ortholog is 100%.

Group of orthologs #304. Best score 46 bits
Score difference with first non-orthologous sequence - E.histolytica:46 P.kodakaraensis:46

B1N5S3              	100.00%		Q5JJF7              	100.00%
C4M712              	40.00%		
C4M1Y0              	38.50%		
C4LYA7              	38.00%		
Bootstrap support for B1N5S3 as seed ortholog is 100%.
Bootstrap support for Q5JJF7 as seed ortholog is 100%.

Group of orthologs #305. Best score 44 bits
Score difference with first non-orthologous sequence - E.histolytica:44 P.kodakaraensis:44

C4LYR0              	100.00%		Q5JDF3              	100.00%
C4M658              	45.73%		
C4MBD8              	35.98%		
C4LWD3              	26.83%		
C4MAX5              	9.76%		
C4M5V0              	7.93%		
C4M1Q5              	7.93%		
C4M9D0              	7.93%		
C4M7K9              	5.49%		
Bootstrap support for C4LYR0 as seed ortholog is 100%.
Bootstrap support for Q5JDF3 as seed ortholog is 100%.

Group of orthologs #306. Best score 44 bits
Score difference with first non-orthologous sequence - E.histolytica:44 P.kodakaraensis:44

C4LXK0              	100.00%		Q5JED4              	100.00%
C4M4C6              	10.95%		
Bootstrap support for C4LXK0 as seed ortholog is 100%.
Bootstrap support for Q5JED4 as seed ortholog is 100%.

Group of orthologs #307. Best score 44 bits
Score difference with first non-orthologous sequence - E.histolytica:44 P.kodakaraensis:44

C4LWK0              	100.00%		Q5JI51              	100.00%
C4LV69              	99.66%		
Bootstrap support for C4LWK0 as seed ortholog is 100%.
Bootstrap support for Q5JI51 as seed ortholog is 100%.

Group of orthologs #308. Best score 44 bits
Score difference with first non-orthologous sequence - E.histolytica:44 P.kodakaraensis:44

B1N4V3              	100.00%		Q5JIB4              	100.00%
Bootstrap support for B1N4V3 as seed ortholog is 100%.
Bootstrap support for Q5JIB4 as seed ortholog is 100%.

Group of orthologs #309. Best score 42 bits
Score difference with first non-orthologous sequence - E.histolytica:42 P.kodakaraensis:42

C4M6Z5              	100.00%		Q5JDL4              	100.00%
Bootstrap support for C4M6Z5 as seed ortholog is 100%.
Bootstrap support for Q5JDL4 as seed ortholog is 100%.

Group of orthologs #310. Best score 40 bits
Score difference with first non-orthologous sequence - E.histolytica:40 P.kodakaraensis:40

C4MBJ8              	100.00%		Q5JJ86              	100.00%
C4M0J1              	79.45%		
C4MAC0              	14.16%		
Bootstrap support for C4MBJ8 as seed ortholog is 100%.
Bootstrap support for Q5JJ86 as seed ortholog is 100%.