###################################
271 groups of orthologs
620 in-paralogs from E.histolytica
296 in-paralogs from P.aerophilum
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 848 bits
Score difference with first non-orthologous sequence - E.histolytica:848 P.aerophilum:739

Q24801              	100.00%		Q8ZT84              	100.00%
Bootstrap support for Q24801 as seed ortholog is 100%.
Bootstrap support for Q8ZT84 as seed ortholog is 100%.

Group of orthologs #2. Best score 735 bits
Score difference with first non-orthologous sequence - E.histolytica:56 P.aerophilum:735

C4M3E3              	100.00%		Q8ZYQ9              	100.00%
Bootstrap support for C4M3E3 as seed ortholog is 79%.
Bootstrap support for Q8ZYQ9 as seed ortholog is 100%.

Group of orthologs #3. Best score 635 bits
Score difference with first non-orthologous sequence - E.histolytica:146 P.aerophilum:635

C4LTC5              	100.00%		Q8ZTN5              	100.00%
C4LY22              	34.38%		Q8ZYN4              	34.40%
Bootstrap support for C4LTC5 as seed ortholog is 99%.
Bootstrap support for Q8ZTN5 as seed ortholog is 100%.

Group of orthologs #4. Best score 592 bits
Score difference with first non-orthologous sequence - E.histolytica:189 P.aerophilum:592

C4M626              	100.00%		Q8ZYQ8              	100.00%
Bootstrap support for C4M626 as seed ortholog is 99%.
Bootstrap support for Q8ZYQ8 as seed ortholog is 100%.

Group of orthologs #5. Best score 488 bits
Score difference with first non-orthologous sequence - E.histolytica:156 P.aerophilum:488

B1N3D6              	100.00%		Q8ZZC1              	100.00%
C4M4N3              	100.00%		
B1N306              	98.61%		
Bootstrap support for B1N3D6 as seed ortholog is 99%.
Bootstrap support for C4M4N3 as seed ortholog is 99%.
Bootstrap support for Q8ZZC1 as seed ortholog is 100%.

Group of orthologs #6. Best score 481 bits
Score difference with first non-orthologous sequence - E.histolytica:481 P.aerophilum:481

Q24802              	100.00%		Q8ZYR1              	100.00%
Bootstrap support for Q24802 as seed ortholog is 100%.
Bootstrap support for Q8ZYR1 as seed ortholog is 100%.

Group of orthologs #7. Best score 468 bits
Score difference with first non-orthologous sequence - E.histolytica:468 P.aerophilum:468

Q4VSM4              	100.00%		Q8ZXR2              	100.00%
Bootstrap support for Q4VSM4 as seed ortholog is 100%.
Bootstrap support for Q8ZXR2 as seed ortholog is 100%.

Group of orthologs #8. Best score 466 bits
Score difference with first non-orthologous sequence - E.histolytica:169 P.aerophilum:407

C4M7D4              	100.00%		O93729              	100.00%
C4MAC9              	99.06%		
Bootstrap support for C4M7D4 as seed ortholog is 100%.
Bootstrap support for O93729 as seed ortholog is 100%.

Group of orthologs #9. Best score 461 bits
Score difference with first non-orthologous sequence - E.histolytica:461 P.aerophilum:461

C4LWS5              	100.00%		Q8ZSV6              	100.00%
Bootstrap support for C4LWS5 as seed ortholog is 100%.
Bootstrap support for Q8ZSV6 as seed ortholog is 100%.

Group of orthologs #10. Best score 443 bits
Score difference with first non-orthologous sequence - E.histolytica:331 P.aerophilum:443

B1N3P0              	100.00%		Q8ZVC5              	100.00%
Bootstrap support for B1N3P0 as seed ortholog is 100%.
Bootstrap support for Q8ZVC5 as seed ortholog is 100%.

Group of orthologs #11. Best score 426 bits
Score difference with first non-orthologous sequence - E.histolytica:426 P.aerophilum:426

C4LY19              	100.00%		Q8ZWU4              	100.00%
Bootstrap support for C4LY19 as seed ortholog is 100%.
Bootstrap support for Q8ZWU4 as seed ortholog is 100%.

Group of orthologs #12. Best score 400 bits
Score difference with first non-orthologous sequence - E.histolytica:400 P.aerophilum:400

C4M244              	100.00%		Q8ZY09              	100.00%
C4M6T2              	45.03%		
Bootstrap support for C4M244 as seed ortholog is 100%.
Bootstrap support for Q8ZY09 as seed ortholog is 100%.

Group of orthologs #13. Best score 392 bits
Score difference with first non-orthologous sequence - E.histolytica:38 P.aerophilum:392

C4M2E4              	100.00%		Q8ZTF8              	100.00%
                    	       		Q8ZVU7              	29.71%
Bootstrap support for C4M2E4 as seed ortholog is 83%.
Bootstrap support for Q8ZTF8 as seed ortholog is 100%.

Group of orthologs #14. Best score 384 bits
Score difference with first non-orthologous sequence - E.histolytica:9 P.aerophilum:384

C4M9H9              	100.00%		Q8ZY88              	100.00%
Bootstrap support for C4M9H9 as seed ortholog is 56%.
Alternative seed ortholog is Q6R8Y2 (9 bits away from this cluster)
Bootstrap support for Q8ZY88 as seed ortholog is 100%.

Group of orthologs #15. Best score 373 bits
Score difference with first non-orthologous sequence - E.histolytica:373 P.aerophilum:373

B1N2J0              	100.00%		Q8ZWP3              	100.00%
Q9NH04              	100.00%		
Bootstrap support for B1N2J0 as seed ortholog is 100%.
Bootstrap support for Q9NH04 as seed ortholog is 100%.
Bootstrap support for Q8ZWP3 as seed ortholog is 100%.

Group of orthologs #16. Best score 361 bits
Score difference with first non-orthologous sequence - E.histolytica:361 P.aerophilum:361

C4M2K7              	100.00%		Q8ZU56              	100.00%
Bootstrap support for C4M2K7 as seed ortholog is 100%.
Bootstrap support for Q8ZU56 as seed ortholog is 100%.

Group of orthologs #17. Best score 359 bits
Score difference with first non-orthologous sequence - E.histolytica:359 P.aerophilum:359

C4LX06              	100.00%		Q8ZX20              	100.00%
Bootstrap support for C4LX06 as seed ortholog is 100%.
Bootstrap support for Q8ZX20 as seed ortholog is 100%.

Group of orthologs #18. Best score 351 bits
Score difference with first non-orthologous sequence - E.histolytica:351 P.aerophilum:351

C4M6P0              	100.00%		Q8ZXT6              	100.00%
Bootstrap support for C4M6P0 as seed ortholog is 100%.
Bootstrap support for Q8ZXT6 as seed ortholog is 100%.

Group of orthologs #19. Best score 339 bits
Score difference with first non-orthologous sequence - E.histolytica:339 P.aerophilum:339

C4LU18              	100.00%		Q8ZTQ7              	100.00%
Bootstrap support for C4LU18 as seed ortholog is 100%.
Bootstrap support for Q8ZTQ7 as seed ortholog is 100%.

Group of orthologs #20. Best score 334 bits
Score difference with first non-orthologous sequence - E.histolytica:334 P.aerophilum:334

C4LXL0              	100.00%		Q8ZVI3              	100.00%
Bootstrap support for C4LXL0 as seed ortholog is 100%.
Bootstrap support for Q8ZVI3 as seed ortholog is 100%.

Group of orthologs #21. Best score 334 bits
Score difference with first non-orthologous sequence - E.histolytica:8 P.aerophilum:334

C4M7P4              	100.00%		Q8ZWP0              	100.00%
Bootstrap support for C4M7P4 as seed ortholog is 43%.
Alternative seed ortholog is C4M2G5 (8 bits away from this cluster)
Bootstrap support for Q8ZWP0 as seed ortholog is 100%.

Group of orthologs #22. Best score 327 bits
Score difference with first non-orthologous sequence - E.histolytica:327 P.aerophilum:327

C4LSP0              	100.00%		Q8ZY71              	100.00%
Bootstrap support for C4LSP0 as seed ortholog is 100%.
Bootstrap support for Q8ZY71 as seed ortholog is 100%.

Group of orthologs #23. Best score 325 bits
Score difference with first non-orthologous sequence - E.histolytica:325 P.aerophilum:325

C4M7V7              	100.00%		Q8ZTZ0              	100.00%
Bootstrap support for C4M7V7 as seed ortholog is 100%.
Bootstrap support for Q8ZTZ0 as seed ortholog is 100%.

Group of orthologs #24. Best score 309 bits
Score difference with first non-orthologous sequence - E.histolytica:309 P.aerophilum:309

C4MAU7              	100.00%		Q8ZZV4              	100.00%
Bootstrap support for C4MAU7 as seed ortholog is 100%.
Bootstrap support for Q8ZZV4 as seed ortholog is 100%.

Group of orthologs #25. Best score 284 bits
Score difference with first non-orthologous sequence - E.histolytica:284 P.aerophilum:284

C4LZR4              	100.00%		Q8ZU12              	100.00%
C4M656              	5.39%		
Bootstrap support for C4LZR4 as seed ortholog is 100%.
Bootstrap support for Q8ZU12 as seed ortholog is 100%.

Group of orthologs #26. Best score 284 bits
Score difference with first non-orthologous sequence - E.histolytica:284 P.aerophilum:284

C4M5H3              	100.00%		O93723              	100.00%
Bootstrap support for C4M5H3 as seed ortholog is 100%.
Bootstrap support for O93723 as seed ortholog is 100%.

Group of orthologs #27. Best score 283 bits
Score difference with first non-orthologous sequence - E.histolytica:283 P.aerophilum:283

C4LUV9              	100.00%		Q8ZTH5              	100.00%
                    	       		Q8ZU90              	18.18%
Bootstrap support for C4LUV9 as seed ortholog is 100%.
Bootstrap support for Q8ZTH5 as seed ortholog is 100%.

Group of orthologs #28. Best score 280 bits
Score difference with first non-orthologous sequence - E.histolytica:280 P.aerophilum:171

C4LWW8              	100.00%		Q8ZU29              	100.00%
Bootstrap support for C4LWW8 as seed ortholog is 100%.
Bootstrap support for Q8ZU29 as seed ortholog is 99%.

Group of orthologs #29. Best score 277 bits
Score difference with first non-orthologous sequence - E.histolytica:197 P.aerophilum:152

C4M4K4              	100.00%		Q8ZYR9              	100.00%
C4LTR6              	13.93%		
Bootstrap support for C4M4K4 as seed ortholog is 100%.
Bootstrap support for Q8ZYR9 as seed ortholog is 100%.

Group of orthologs #30. Best score 268 bits
Score difference with first non-orthologous sequence - E.histolytica:156 P.aerophilum:115

C4M071              	100.00%		Q8ZT95              	100.00%
Bootstrap support for C4M071 as seed ortholog is 99%.
Bootstrap support for Q8ZT95 as seed ortholog is 99%.

Group of orthologs #31. Best score 265 bits
Score difference with first non-orthologous sequence - E.histolytica:265 P.aerophilum:172

B1N2N4              	100.00%		Q8ZVF0              	100.00%
C4LVZ3              	100.00%		
B1N610              	43.01%		
Bootstrap support for B1N2N4 as seed ortholog is 100%.
Bootstrap support for C4LVZ3 as seed ortholog is 100%.
Bootstrap support for Q8ZVF0 as seed ortholog is 100%.

Group of orthologs #32. Best score 262 bits
Score difference with first non-orthologous sequence - E.histolytica:262 P.aerophilum:262

C4LUQ2              	100.00%		Q8ZW54              	100.00%
C4M3R6              	14.06%		
Bootstrap support for C4LUQ2 as seed ortholog is 100%.
Bootstrap support for Q8ZW54 as seed ortholog is 100%.

Group of orthologs #33. Best score 258 bits
Score difference with first non-orthologous sequence - E.histolytica:258 P.aerophilum:258

C4M8V1              	100.00%		Q8ZYD8              	100.00%
Bootstrap support for C4M8V1 as seed ortholog is 100%.
Bootstrap support for Q8ZYD8 as seed ortholog is 100%.

Group of orthologs #34. Best score 255 bits
Score difference with first non-orthologous sequence - E.histolytica:208 P.aerophilum:255

C4M2G9              	100.00%		Q8ZVQ9              	100.00%
Bootstrap support for C4M2G9 as seed ortholog is 100%.
Bootstrap support for Q8ZVQ9 as seed ortholog is 100%.

Group of orthologs #35. Best score 254 bits
Score difference with first non-orthologous sequence - E.histolytica:254 P.aerophilum:254

C4LV24              	100.00%		Q8ZTP4              	100.00%
B1N346              	39.61%		
Bootstrap support for C4LV24 as seed ortholog is 100%.
Bootstrap support for Q8ZTP4 as seed ortholog is 100%.

Group of orthologs #36. Best score 254 bits
Score difference with first non-orthologous sequence - E.histolytica:254 P.aerophilum:254

C4M220              	100.00%		Q8ZUK1              	100.00%
Bootstrap support for C4M220 as seed ortholog is 100%.
Bootstrap support for Q8ZUK1 as seed ortholog is 100%.

Group of orthologs #37. Best score 250 bits
Score difference with first non-orthologous sequence - E.histolytica:250 P.aerophilum:250

C4M8E1              	100.00%		Q8ZYB3              	100.00%
Bootstrap support for C4M8E1 as seed ortholog is 100%.
Bootstrap support for Q8ZYB3 as seed ortholog is 100%.

Group of orthologs #38. Best score 247 bits
Score difference with first non-orthologous sequence - E.histolytica:116 P.aerophilum:247

C4M7U9              	100.00%		Q8ZTU5              	100.00%
C4LU94              	99.26%		
Bootstrap support for C4M7U9 as seed ortholog is 99%.
Bootstrap support for Q8ZTU5 as seed ortholog is 100%.

Group of orthologs #39. Best score 238 bits
Score difference with first non-orthologous sequence - E.histolytica:238 P.aerophilum:238

C4M431              	100.00%		Q8ZVG2              	100.00%
B1N511              	59.53%		
Bootstrap support for C4M431 as seed ortholog is 100%.
Bootstrap support for Q8ZVG2 as seed ortholog is 100%.

Group of orthologs #40. Best score 238 bits
Score difference with first non-orthologous sequence - E.histolytica:161 P.aerophilum:238

C4M6G8              	100.00%		Q8ZYN2              	100.00%
Bootstrap support for C4M6G8 as seed ortholog is 99%.
Bootstrap support for Q8ZYN2 as seed ortholog is 100%.

Group of orthologs #41. Best score 235 bits
Score difference with first non-orthologous sequence - E.histolytica:235 P.aerophilum:235

C4LZ14              	100.00%		Q8ZU26              	100.00%
Bootstrap support for C4LZ14 as seed ortholog is 100%.
Bootstrap support for Q8ZU26 as seed ortholog is 100%.

Group of orthologs #42. Best score 233 bits
Score difference with first non-orthologous sequence - E.histolytica:233 P.aerophilum:152

C4LZZ7              	100.00%		Q8ZTM5              	100.00%
Bootstrap support for C4LZZ7 as seed ortholog is 100%.
Bootstrap support for Q8ZTM5 as seed ortholog is 99%.

Group of orthologs #43. Best score 230 bits
Score difference with first non-orthologous sequence - E.histolytica:230 P.aerophilum:230

C4M0K5              	100.00%		Q8ZV67              	100.00%
Bootstrap support for C4M0K5 as seed ortholog is 100%.
Bootstrap support for Q8ZV67 as seed ortholog is 100%.

Group of orthologs #44. Best score 229 bits
Score difference with first non-orthologous sequence - E.histolytica:229 P.aerophilum:229

C4M438              	100.00%		Q8ZXA8              	100.00%
Bootstrap support for C4M438 as seed ortholog is 100%.
Bootstrap support for Q8ZXA8 as seed ortholog is 100%.

Group of orthologs #45. Best score 225 bits
Score difference with first non-orthologous sequence - E.histolytica:225 P.aerophilum:225

C4LU10              	100.00%		Q8ZXJ4              	100.00%
Bootstrap support for C4LU10 as seed ortholog is 100%.
Bootstrap support for Q8ZXJ4 as seed ortholog is 100%.

Group of orthologs #46. Best score 222 bits
Score difference with first non-orthologous sequence - E.histolytica:222 P.aerophilum:222

Q86D27              	100.00%		Q8ZV75              	100.00%
C4MAS9              	60.31%		
B1N417              	16.96%		
Bootstrap support for Q86D27 as seed ortholog is 100%.
Bootstrap support for Q8ZV75 as seed ortholog is 100%.

Group of orthologs #47. Best score 221 bits
Score difference with first non-orthologous sequence - E.histolytica:36 P.aerophilum:221

C4M0E2              	100.00%		Q8ZVV2              	100.00%
Bootstrap support for C4M0E2 as seed ortholog is 73%.
Alternative seed ortholog is C4LSJ4 (36 bits away from this cluster)
Bootstrap support for Q8ZVV2 as seed ortholog is 100%.

Group of orthologs #48. Best score 217 bits
Score difference with first non-orthologous sequence - E.histolytica:99 P.aerophilum:103

C4LZN0              	100.00%		Q8ZYM8              	100.00%
Bootstrap support for C4LZN0 as seed ortholog is 99%.
Bootstrap support for Q8ZYM8 as seed ortholog is 99%.

Group of orthologs #49. Best score 211 bits
Score difference with first non-orthologous sequence - E.histolytica:211 P.aerophilum:211

C4M0H7              	100.00%		Q8ZY90              	100.00%
Bootstrap support for C4M0H7 as seed ortholog is 100%.
Bootstrap support for Q8ZY90 as seed ortholog is 100%.

Group of orthologs #50. Best score 208 bits
Score difference with first non-orthologous sequence - E.histolytica:208 P.aerophilum:208

C4LUA1              	100.00%		Q8ZTJ0              	100.00%
C4LTE7              	75.47%		
Bootstrap support for C4LUA1 as seed ortholog is 100%.
Bootstrap support for Q8ZTJ0 as seed ortholog is 100%.

Group of orthologs #51. Best score 202 bits
Score difference with first non-orthologous sequence - E.histolytica:8 P.aerophilum:129

C4LYB5              	100.00%		Q8ZYK4              	100.00%
                    	       		Q8ZWS2              	45.52%
Bootstrap support for C4LYB5 as seed ortholog is 59%.
Alternative seed ortholog is C4M8Z1 (8 bits away from this cluster)
Bootstrap support for Q8ZYK4 as seed ortholog is 99%.

Group of orthologs #52. Best score 200 bits
Score difference with first non-orthologous sequence - E.histolytica:91 P.aerophilum:200

C4M8I1              	100.00%		Q8ZU41              	100.00%
C4LYC2              	12.43%		
Bootstrap support for C4M8I1 as seed ortholog is 99%.
Bootstrap support for Q8ZU41 as seed ortholog is 100%.

Group of orthologs #53. Best score 199 bits
Score difference with first non-orthologous sequence - E.histolytica:199 P.aerophilum:199

C4LYN2              	100.00%		Q8ZTI9              	100.00%
Bootstrap support for C4LYN2 as seed ortholog is 100%.
Bootstrap support for Q8ZTI9 as seed ortholog is 100%.

Group of orthologs #54. Best score 194 bits
Score difference with first non-orthologous sequence - E.histolytica:103 P.aerophilum:194

C4MAW3              	100.00%		Q8ZTI8              	100.00%
C4M5N2              	16.09%		
Bootstrap support for C4MAW3 as seed ortholog is 99%.
Bootstrap support for Q8ZTI8 as seed ortholog is 100%.

Group of orthologs #55. Best score 193 bits
Score difference with first non-orthologous sequence - E.histolytica:193 P.aerophilum:193

C4LWA8              	100.00%		Q8ZU33              	100.00%
C4M1P6              	8.31%		
Bootstrap support for C4LWA8 as seed ortholog is 100%.
Bootstrap support for Q8ZU33 as seed ortholog is 100%.

Group of orthologs #56. Best score 193 bits
Score difference with first non-orthologous sequence - E.histolytica:193 P.aerophilum:193

C4LWZ3              	100.00%		Q8ZYF5              	100.00%
Bootstrap support for C4LWZ3 as seed ortholog is 100%.
Bootstrap support for Q8ZYF5 as seed ortholog is 100%.

Group of orthologs #57. Best score 190 bits
Score difference with first non-orthologous sequence - E.histolytica:190 P.aerophilum:190

C4LW95              	100.00%		Q8ZUK0              	100.00%
                    	       		Q8ZWL7              	5.92%
Bootstrap support for C4LW95 as seed ortholog is 100%.
Bootstrap support for Q8ZUK0 as seed ortholog is 100%.

Group of orthologs #58. Best score 188 bits
Score difference with first non-orthologous sequence - E.histolytica:188 P.aerophilum:188

C4LW09              	100.00%		Q8ZW52              	100.00%
B1N4Y7              	82.85%		
Bootstrap support for C4LW09 as seed ortholog is 100%.
Bootstrap support for Q8ZW52 as seed ortholog is 100%.

Group of orthologs #59. Best score 188 bits
Score difference with first non-orthologous sequence - E.histolytica:3 P.aerophilum:188

C4LUL4              	100.00%		Q8ZVM1              	100.00%
Bootstrap support for C4LUL4 as seed ortholog is 54%.
Alternative seed ortholog is C4M7Z3 (3 bits away from this cluster)
Bootstrap support for Q8ZVM1 as seed ortholog is 100%.

Group of orthologs #60. Best score 188 bits
Score difference with first non-orthologous sequence - E.histolytica:188 P.aerophilum:188

C4M538              	100.00%		Q8ZX61              	100.00%
Bootstrap support for C4M538 as seed ortholog is 100%.
Bootstrap support for Q8ZX61 as seed ortholog is 100%.

Group of orthologs #61. Best score 187 bits
Score difference with first non-orthologous sequence - E.histolytica:187 P.aerophilum:187

C4LXE8              	100.00%		Q8ZYE7              	100.00%
Bootstrap support for C4LXE8 as seed ortholog is 100%.
Bootstrap support for Q8ZYE7 as seed ortholog is 100%.

Group of orthologs #62. Best score 186 bits
Score difference with first non-orthologous sequence - E.histolytica:99 P.aerophilum:10

C4M6F5              	100.00%		Q8ZUH3              	100.00%
C4M8M2              	14.07%		
Bootstrap support for C4M6F5 as seed ortholog is 99%.
Bootstrap support for Q8ZUH3 as seed ortholog is 65%.
Alternative seed ortholog is Q8ZVH0 (10 bits away from this cluster)

Group of orthologs #63. Best score 185 bits
Score difference with first non-orthologous sequence - E.histolytica:185 P.aerophilum:185

C4M7U0              	100.00%		Q8ZXN9              	100.00%
Bootstrap support for C4M7U0 as seed ortholog is 100%.
Bootstrap support for Q8ZXN9 as seed ortholog is 100%.

Group of orthologs #64. Best score 181 bits
Score difference with first non-orthologous sequence - E.histolytica:181 P.aerophilum:181

C4LVD3              	100.00%		Q8ZUU0              	100.00%
Bootstrap support for C4LVD3 as seed ortholog is 100%.
Bootstrap support for Q8ZUU0 as seed ortholog is 100%.

Group of orthologs #65. Best score 178 bits
Score difference with first non-orthologous sequence - E.histolytica:178 P.aerophilum:79

C4M802              	100.00%		Q8ZW34              	100.00%
Bootstrap support for C4M802 as seed ortholog is 100%.
Bootstrap support for Q8ZW34 as seed ortholog is 97%.

Group of orthologs #66. Best score 176 bits
Score difference with first non-orthologous sequence - E.histolytica:176 P.aerophilum:176

C4LYN6              	100.00%		Q8ZTY7              	100.00%
C4LTI8              	39.36%		
Bootstrap support for C4LYN6 as seed ortholog is 100%.
Bootstrap support for Q8ZTY7 as seed ortholog is 100%.

Group of orthologs #67. Best score 173 bits
Score difference with first non-orthologous sequence - E.histolytica:173 P.aerophilum:173

C4LVZ6              	100.00%		Q8ZYK5              	100.00%
C4LT81              	96.10%		
Bootstrap support for C4LVZ6 as seed ortholog is 100%.
Bootstrap support for Q8ZYK5 as seed ortholog is 100%.

Group of orthologs #68. Best score 173 bits
Score difference with first non-orthologous sequence - E.histolytica:173 P.aerophilum:90

C4M6U0              	100.00%		Q8ZWY9              	100.00%
Bootstrap support for C4M6U0 as seed ortholog is 100%.
Bootstrap support for Q8ZWY9 as seed ortholog is 99%.

Group of orthologs #69. Best score 172 bits
Score difference with first non-orthologous sequence - E.histolytica:172 P.aerophilum:172

C4LZB2              	100.00%		Q8ZYG3              	100.00%
C4M7W7              	8.40%		
Bootstrap support for C4LZB2 as seed ortholog is 100%.
Bootstrap support for Q8ZYG3 as seed ortholog is 100%.

Group of orthologs #70. Best score 170 bits
Score difference with first non-orthologous sequence - E.histolytica:66 P.aerophilum:170

C4M297              	100.00%		Q8ZYD9              	100.00%
Bootstrap support for C4M297 as seed ortholog is 91%.
Bootstrap support for Q8ZYD9 as seed ortholog is 100%.

Group of orthologs #71. Best score 169 bits
Score difference with first non-orthologous sequence - E.histolytica:169 P.aerophilum:169

C4LW30              	100.00%		Q8ZU57              	100.00%
Bootstrap support for C4LW30 as seed ortholog is 100%.
Bootstrap support for Q8ZU57 as seed ortholog is 100%.

Group of orthologs #72. Best score 169 bits
Score difference with first non-orthologous sequence - E.histolytica:169 P.aerophilum:169

C4LZV4              	100.00%		Q8ZYF6              	100.00%
Bootstrap support for C4LZV4 as seed ortholog is 100%.
Bootstrap support for Q8ZYF6 as seed ortholog is 100%.

Group of orthologs #73. Best score 164 bits
Score difference with first non-orthologous sequence - E.histolytica:164 P.aerophilum:164

C4M653              	100.00%		Q8ZWZ1              	100.00%
Bootstrap support for C4M653 as seed ortholog is 100%.
Bootstrap support for Q8ZWZ1 as seed ortholog is 100%.

Group of orthologs #74. Best score 163 bits
Score difference with first non-orthologous sequence - E.histolytica:163 P.aerophilum:163

B1N384              	100.00%		Q8ZW51              	100.00%
C4LXX5              	100.00%		
C4LZU1              	100.00%		
C4LZA2              	99.27%		
Bootstrap support for B1N384 as seed ortholog is 100%.
Bootstrap support for C4LXX5 as seed ortholog is 100%.
Bootstrap support for C4LZU1 as seed ortholog is 100%.
Bootstrap support for Q8ZW51 as seed ortholog is 100%.

Group of orthologs #75. Best score 161 bits
Score difference with first non-orthologous sequence - E.histolytica:161 P.aerophilum:161

C4M1I3              	100.00%		Q8ZVG8              	100.00%
C4M1F4              	23.58%		
C4LZY4              	22.71%		
Bootstrap support for C4M1I3 as seed ortholog is 100%.
Bootstrap support for Q8ZVG8 as seed ortholog is 100%.

Group of orthologs #76. Best score 161 bits
Score difference with first non-orthologous sequence - E.histolytica:161 P.aerophilum:161

C4LZ12              	100.00%		Q8ZYT7              	100.00%
Bootstrap support for C4LZ12 as seed ortholog is 100%.
Bootstrap support for Q8ZYT7 as seed ortholog is 100%.

Group of orthologs #77. Best score 159 bits
Score difference with first non-orthologous sequence - E.histolytica:159 P.aerophilum:159

C4M1T1              	100.00%		Q8ZT51              	100.00%
Bootstrap support for C4M1T1 as seed ortholog is 100%.
Bootstrap support for Q8ZT51 as seed ortholog is 100%.

Group of orthologs #78. Best score 152 bits
Score difference with first non-orthologous sequence - E.histolytica:152 P.aerophilum:152

C4M1T0              	100.00%		Q8ZXM3              	100.00%
B1N2N3              	98.40%		
Bootstrap support for C4M1T0 as seed ortholog is 100%.
Bootstrap support for Q8ZXM3 as seed ortholog is 100%.

Group of orthologs #79. Best score 152 bits
Score difference with first non-orthologous sequence - E.histolytica:70 P.aerophilum:76

Q76KF6              	100.00%		Q8ZXX8              	100.00%
Bootstrap support for Q76KF6 as seed ortholog is 97%.
Bootstrap support for Q8ZXX8 as seed ortholog is 98%.

Group of orthologs #80. Best score 151 bits
Score difference with first non-orthologous sequence - E.histolytica:151 P.aerophilum:151

C4M5B7              	100.00%		Q8ZYQ4              	100.00%
Bootstrap support for C4M5B7 as seed ortholog is 100%.
Bootstrap support for Q8ZYQ4 as seed ortholog is 100%.

Group of orthologs #81. Best score 147 bits
Score difference with first non-orthologous sequence - E.histolytica:84 P.aerophilum:76

C4M840              	100.00%		Q8ZVG4              	100.00%
Bootstrap support for C4M840 as seed ortholog is 99%.
Bootstrap support for Q8ZVG4 as seed ortholog is 98%.

Group of orthologs #82. Best score 144 bits
Score difference with first non-orthologous sequence - E.histolytica:75 P.aerophilum:77

C4M2P2              	100.00%		Q8ZVJ5              	100.00%
Bootstrap support for C4M2P2 as seed ortholog is 97%.
Bootstrap support for Q8ZVJ5 as seed ortholog is 98%.

Group of orthologs #83. Best score 141 bits
Score difference with first non-orthologous sequence - E.histolytica:78 P.aerophilum:141

C4M3W0              	100.00%		Q8ZT66              	100.00%
C4M422              	100.00%		Q8ZTS1              	100.00%
C4LVN6              	75.47%		
C4M3B2              	65.04%		
B1N3U1              	9.98%		
Bootstrap support for C4M3W0 as seed ortholog is 98%.
Bootstrap support for C4M422 as seed ortholog is 84%.
Bootstrap support for Q8ZT66 as seed ortholog is 100%.
Bootstrap support for Q8ZTS1 as seed ortholog is 100%.

Group of orthologs #84. Best score 141 bits
Score difference with first non-orthologous sequence - E.histolytica:141 P.aerophilum:141

C4LWX7              	100.00%		Q8ZTA8              	100.00%
Bootstrap support for C4LWX7 as seed ortholog is 100%.
Bootstrap support for Q8ZTA8 as seed ortholog is 100%.

Group of orthologs #85. Best score 140 bits
Score difference with first non-orthologous sequence - E.histolytica:140 P.aerophilum:140

C4M7H7              	100.00%		Q8ZVR0              	100.00%
P52653              	100.00%		
A7UFC2              	18.93%		
Bootstrap support for C4M7H7 as seed ortholog is 100%.
Bootstrap support for P52653 as seed ortholog is 100%.
Bootstrap support for Q8ZVR0 as seed ortholog is 100%.

Group of orthologs #86. Best score 139 bits
Score difference with first non-orthologous sequence - E.histolytica:139 P.aerophilum:139

C4M192              	100.00%		Q8ZWK6              	100.00%
Bootstrap support for C4M192 as seed ortholog is 100%.
Bootstrap support for Q8ZWK6 as seed ortholog is 100%.

Group of orthologs #87. Best score 138 bits
Score difference with first non-orthologous sequence - E.histolytica:138 P.aerophilum:138

C4M4Y1              	100.00%		Q8ZZW3              	100.00%
Bootstrap support for C4M4Y1 as seed ortholog is 100%.
Bootstrap support for Q8ZZW3 as seed ortholog is 100%.

Group of orthologs #88. Best score 136 bits
Score difference with first non-orthologous sequence - E.histolytica:136 P.aerophilum:136

C4M1V7              	100.00%		Q8ZUJ0              	100.00%
C4M3X0              	10.85%		
C4M2K1              	9.91%		
C4M1F1              	9.34%		
B1N3C2              	5.14%		
Bootstrap support for C4M1V7 as seed ortholog is 100%.
Bootstrap support for Q8ZUJ0 as seed ortholog is 100%.

Group of orthologs #89. Best score 136 bits
Score difference with first non-orthologous sequence - E.histolytica:136 P.aerophilum:136

B1N2I3              	100.00%		Q8ZTM9              	100.00%
Bootstrap support for B1N2I3 as seed ortholog is 100%.
Bootstrap support for Q8ZTM9 as seed ortholog is 100%.

Group of orthologs #90. Best score 136 bits
Score difference with first non-orthologous sequence - E.histolytica:136 P.aerophilum:136

C4LSV8              	100.00%		Q8ZU81              	100.00%
Bootstrap support for C4LSV8 as seed ortholog is 100%.
Bootstrap support for Q8ZU81 as seed ortholog is 100%.

Group of orthologs #91. Best score 135 bits
Score difference with first non-orthologous sequence - E.histolytica:135 P.aerophilum:135

C4LYY8              	100.00%		Q8ZXW7              	100.00%
Bootstrap support for C4LYY8 as seed ortholog is 100%.
Bootstrap support for Q8ZXW7 as seed ortholog is 100%.

Group of orthologs #92. Best score 134 bits
Score difference with first non-orthologous sequence - E.histolytica:134 P.aerophilum:134

C4LZG9              	100.00%		Q8ZSU7              	100.00%
C4LZP2              	100.00%		
Bootstrap support for C4LZG9 as seed ortholog is 100%.
Bootstrap support for C4LZP2 as seed ortholog is 100%.
Bootstrap support for Q8ZSU7 as seed ortholog is 100%.

Group of orthologs #93. Best score 133 bits
Score difference with first non-orthologous sequence - E.histolytica:133 P.aerophilum:133

C4M7J5              	100.00%		Q8ZYP5              	100.00%
Bootstrap support for C4M7J5 as seed ortholog is 100%.
Bootstrap support for Q8ZYP5 as seed ortholog is 100%.

Group of orthologs #94. Best score 129 bits
Score difference with first non-orthologous sequence - E.histolytica:129 P.aerophilum:129

C4M7A5              	100.00%		Q8ZWL4              	100.00%
C4M0C6              	90.74%		
C4M7H3              	90.12%		
Bootstrap support for C4M7A5 as seed ortholog is 100%.
Bootstrap support for Q8ZWL4 as seed ortholog is 100%.

Group of orthologs #95. Best score 129 bits
Score difference with first non-orthologous sequence - E.histolytica:129 P.aerophilum:129

C4LXN0              	100.00%		Q8ZTJ4              	100.00%
Bootstrap support for C4LXN0 as seed ortholog is 100%.
Bootstrap support for Q8ZTJ4 as seed ortholog is 100%.

Group of orthologs #96. Best score 128 bits
Score difference with first non-orthologous sequence - E.histolytica:128 P.aerophilum:128

P34107              	100.00%		O93724              	100.00%
C4LX20              	100.00%		
Bootstrap support for P34107 as seed ortholog is 100%.
Bootstrap support for C4LX20 as seed ortholog is 100%.
Bootstrap support for O93724 as seed ortholog is 100%.

Group of orthologs #97. Best score 128 bits
Score difference with first non-orthologous sequence - E.histolytica:128 P.aerophilum:128

C4LXB8              	100.00%		Q8ZT09              	100.00%
C4M2N7              	13.73%		
Bootstrap support for C4LXB8 as seed ortholog is 100%.
Bootstrap support for Q8ZT09 as seed ortholog is 100%.

Group of orthologs #98. Best score 127 bits
Score difference with first non-orthologous sequence - E.histolytica:127 P.aerophilum:127

C4MA19              	100.00%		Q8ZWU9              	100.00%
Bootstrap support for C4MA19 as seed ortholog is 100%.
Bootstrap support for Q8ZWU9 as seed ortholog is 100%.

Group of orthologs #99. Best score 126 bits
Score difference with first non-orthologous sequence - E.histolytica:126 P.aerophilum:126

C4LTA0              	100.00%		Q8ZSV4              	100.00%
B1N5V8              	75.71%		
Bootstrap support for C4LTA0 as seed ortholog is 100%.
Bootstrap support for Q8ZSV4 as seed ortholog is 100%.

Group of orthologs #100. Best score 125 bits
Score difference with first non-orthologous sequence - E.histolytica:125 P.aerophilum:125

C4LTU4              	100.00%		Q8ZY04              	100.00%
C4LUV6              	35.48%		
Bootstrap support for C4LTU4 as seed ortholog is 100%.
Bootstrap support for Q8ZY04 as seed ortholog is 100%.

Group of orthologs #101. Best score 124 bits
Score difference with first non-orthologous sequence - E.histolytica:11 P.aerophilum:124

C4M8E8              	100.00%		Q8ZST4              	100.00%
Bootstrap support for C4M8E8 as seed ortholog is 63%.
Alternative seed ortholog is C4LY11 (11 bits away from this cluster)
Bootstrap support for Q8ZST4 as seed ortholog is 100%.

Group of orthologs #102. Best score 124 bits
Score difference with first non-orthologous sequence - E.histolytica:124 P.aerophilum:124

C4M828              	100.00%		Q8ZWQ7              	100.00%
Bootstrap support for C4M828 as seed ortholog is 100%.
Bootstrap support for Q8ZWQ7 as seed ortholog is 100%.

Group of orthologs #103. Best score 123 bits
Score difference with first non-orthologous sequence - E.histolytica:123 P.aerophilum:123

C4M0X2              	100.00%		Q8ZW26              	100.00%
C4MAS4              	37.42%		
C4M907              	21.93%		
C4LYS6              	20.93%		
C4MB24              	20.32%		
C4LTI9              	20.12%		
C4M495              	19.92%		
C4M6M6              	17.51%		
C4LY80              	17.51%		
C4M2N9              	17.51%		
C4LUV2              	17.30%		
C4LTY6              	16.30%		
C4LSJ0              	16.10%		
C4LTG4              	14.29%		
C4M7Q8              	13.68%		
C4M4K6              	13.08%		
C4LSG2              	11.27%		
C4M9M5              	10.87%		
C4M9C2              	10.46%		
C4LTX2              	8.85%		
C4MAY5              	8.65%		
C4M9T0              	8.25%		
C4M8I7              	7.24%		
C4LYR7              	6.24%		
C4M672              	5.63%		
C4LWV7              	5.63%		
C4LWW9              	5.03%		
Bootstrap support for C4M0X2 as seed ortholog is 100%.
Bootstrap support for Q8ZW26 as seed ortholog is 100%.

Group of orthologs #104. Best score 123 bits
Score difference with first non-orthologous sequence - E.histolytica:67 P.aerophilum:123

C4M1K5              	100.00%		Q8ZYI0              	100.00%
Bootstrap support for C4M1K5 as seed ortholog is 91%.
Bootstrap support for Q8ZYI0 as seed ortholog is 100%.

Group of orthologs #105. Best score 122 bits
Score difference with first non-orthologous sequence - E.histolytica:122 P.aerophilum:122

C4LY44              	100.00%		Q8ZX71              	100.00%
Bootstrap support for C4LY44 as seed ortholog is 100%.
Bootstrap support for Q8ZX71 as seed ortholog is 100%.

Group of orthologs #106. Best score 121 bits
Score difference with first non-orthologous sequence - E.histolytica:121 P.aerophilum:121

C4M0V6              	100.00%		Q8ZSQ8              	100.00%
Bootstrap support for C4M0V6 as seed ortholog is 100%.
Bootstrap support for Q8ZSQ8 as seed ortholog is 100%.

Group of orthologs #107. Best score 121 bits
Score difference with first non-orthologous sequence - E.histolytica:121 P.aerophilum:54

C4LYD9              	100.00%		Q8ZVE1              	100.00%
Bootstrap support for C4LYD9 as seed ortholog is 100%.
Bootstrap support for Q8ZVE1 as seed ortholog is 90%.

Group of orthologs #108. Best score 121 bits
Score difference with first non-orthologous sequence - E.histolytica:121 P.aerophilum:121

C4M4G8              	100.00%		Q8ZV31              	100.00%
Bootstrap support for C4M4G8 as seed ortholog is 100%.
Bootstrap support for Q8ZV31 as seed ortholog is 100%.

Group of orthologs #109. Best score 119 bits
Score difference with first non-orthologous sequence - E.histolytica:119 P.aerophilum:119

C4LVB0              	100.00%		Q8ZTR0              	100.00%
Bootstrap support for C4LVB0 as seed ortholog is 100%.
Bootstrap support for Q8ZTR0 as seed ortholog is 100%.

Group of orthologs #110. Best score 119 bits
Score difference with first non-orthologous sequence - E.histolytica:119 P.aerophilum:119

C4LU56              	100.00%		Q8ZVV7              	100.00%
Bootstrap support for C4LU56 as seed ortholog is 100%.
Bootstrap support for Q8ZVV7 as seed ortholog is 100%.

Group of orthologs #111. Best score 119 bits
Score difference with first non-orthologous sequence - E.histolytica:42 P.aerophilum:119

C4M0R0              	100.00%		Q8ZTB6              	100.00%
Bootstrap support for C4M0R0 as seed ortholog is 92%.
Bootstrap support for Q8ZTB6 as seed ortholog is 100%.

Group of orthologs #112. Best score 118 bits
Score difference with first non-orthologous sequence - E.histolytica:118 P.aerophilum:118

C4LY91              	100.00%		Q8ZYI4              	100.00%
C4LYM8              	6.15%		
Bootstrap support for C4LY91 as seed ortholog is 100%.
Bootstrap support for Q8ZYI4 as seed ortholog is 100%.

Group of orthologs #113. Best score 117 bits
Score difference with first non-orthologous sequence - E.histolytica:117 P.aerophilum:117

C4LZ42              	100.00%		Q8ZTV0              	100.00%
C4M367              	88.56%		
Bootstrap support for C4LZ42 as seed ortholog is 100%.
Bootstrap support for Q8ZTV0 as seed ortholog is 100%.

Group of orthologs #114. Best score 117 bits
Score difference with first non-orthologous sequence - E.histolytica:36 P.aerophilum:117

C4LWW4              	100.00%		Q8ZVU8              	100.00%
Bootstrap support for C4LWW4 as seed ortholog is 84%.
Bootstrap support for Q8ZVU8 as seed ortholog is 100%.

Group of orthologs #115. Best score 117 bits
Score difference with first non-orthologous sequence - E.histolytica:117 P.aerophilum:117

C4M2T5              	100.00%		Q8ZV59              	100.00%
Bootstrap support for C4M2T5 as seed ortholog is 100%.
Bootstrap support for Q8ZV59 as seed ortholog is 100%.

Group of orthologs #116. Best score 116 bits
Score difference with first non-orthologous sequence - E.histolytica:116 P.aerophilum:116

C4LXX7              	100.00%		Q8ZT11              	100.00%
C4M9M7              	100.00%		
Bootstrap support for C4LXX7 as seed ortholog is 100%.
Bootstrap support for C4M9M7 as seed ortholog is 100%.
Bootstrap support for Q8ZT11 as seed ortholog is 100%.

Group of orthologs #117. Best score 116 bits
Score difference with first non-orthologous sequence - E.histolytica:116 P.aerophilum:116

C4M5F3              	100.00%		Q8ZWS0              	100.00%
C4LXS3              	29.06%		
Bootstrap support for C4M5F3 as seed ortholog is 100%.
Bootstrap support for Q8ZWS0 as seed ortholog is 100%.

Group of orthologs #118. Best score 116 bits
Score difference with first non-orthologous sequence - E.histolytica:116 P.aerophilum:116

B1N627              	100.00%		Q8ZXM0              	100.00%
Bootstrap support for B1N627 as seed ortholog is 100%.
Bootstrap support for Q8ZXM0 as seed ortholog is 100%.

Group of orthologs #119. Best score 114 bits
Score difference with first non-orthologous sequence - E.histolytica:114 P.aerophilum:114

C4M8K7              	100.00%		Q8ZU14              	100.00%
C4M8Q4              	76.64%		
C4M6T8              	6.50%		
Bootstrap support for C4M8K7 as seed ortholog is 100%.
Bootstrap support for Q8ZU14 as seed ortholog is 100%.

Group of orthologs #120. Best score 114 bits
Score difference with first non-orthologous sequence - E.histolytica:114 P.aerophilum:114

C4M7C7              	100.00%		Q8ZTG8              	100.00%
Bootstrap support for C4M7C7 as seed ortholog is 100%.
Bootstrap support for Q8ZTG8 as seed ortholog is 100%.

Group of orthologs #121. Best score 114 bits
Score difference with first non-orthologous sequence - E.histolytica:114 P.aerophilum:114

C4M773              	100.00%		Q8ZTR2              	100.00%
Bootstrap support for C4M773 as seed ortholog is 100%.
Bootstrap support for Q8ZTR2 as seed ortholog is 100%.

Group of orthologs #122. Best score 114 bits
Score difference with first non-orthologous sequence - E.histolytica:22 P.aerophilum:114

C4M746              	100.00%		Q8ZW82              	100.00%
Bootstrap support for C4M746 as seed ortholog is 71%.
Alternative seed ortholog is C4LVV7 (22 bits away from this cluster)
Bootstrap support for Q8ZW82 as seed ortholog is 100%.

Group of orthologs #123. Best score 113 bits
Score difference with first non-orthologous sequence - E.histolytica:113 P.aerophilum:113

C4LZV8              	100.00%		Q8ZV04              	100.00%
Bootstrap support for C4LZV8 as seed ortholog is 100%.
Bootstrap support for Q8ZV04 as seed ortholog is 100%.

Group of orthologs #124. Best score 112 bits
Score difference with first non-orthologous sequence - E.histolytica:112 P.aerophilum:112

C4LYF4              	100.00%		Q8ZTD3              	100.00%
B1N336              	95.61%		
B1N418              	50.27%		
Bootstrap support for C4LYF4 as seed ortholog is 100%.
Bootstrap support for Q8ZTD3 as seed ortholog is 100%.

Group of orthologs #125. Best score 112 bits
Score difference with first non-orthologous sequence - E.histolytica:112 P.aerophilum:112

C4M0J3              	100.00%		Q8ZYE1              	100.00%
Bootstrap support for C4M0J3 as seed ortholog is 100%.
Bootstrap support for Q8ZYE1 as seed ortholog is 100%.

Group of orthologs #126. Best score 110 bits
Score difference with first non-orthologous sequence - E.histolytica:39 P.aerophilum:110

C4M2G1              	100.00%		Q8ZVM9              	100.00%
Bootstrap support for C4M2G1 as seed ortholog is 94%.
Bootstrap support for Q8ZVM9 as seed ortholog is 100%.

Group of orthologs #127. Best score 110 bits
Score difference with first non-orthologous sequence - E.histolytica:110 P.aerophilum:110

C4M750              	100.00%		Q8ZVB5              	100.00%
Bootstrap support for C4M750 as seed ortholog is 100%.
Bootstrap support for Q8ZVB5 as seed ortholog is 100%.

Group of orthologs #128. Best score 108 bits
Score difference with first non-orthologous sequence - E.histolytica:108 P.aerophilum:108

B1N5J9              	100.00%		Q8ZW78              	100.00%
C4M818              	100.00%		Q8ZW79              	100.00%
C4MAC4              	100.00%		
B1N3S8              	99.39%		
Bootstrap support for B1N5J9 as seed ortholog is 100%.
Bootstrap support for C4M818 as seed ortholog is 100%.
Bootstrap support for C4MAC4 as seed ortholog is 100%.
Bootstrap support for Q8ZW78 as seed ortholog is 100%.
Bootstrap support for Q8ZW79 as seed ortholog is 100%.

Group of orthologs #129. Best score 108 bits
Score difference with first non-orthologous sequence - E.histolytica:108 P.aerophilum:45

C4M4I0              	100.00%		Q8ZU64              	100.00%
C4M162              	8.50%		
C4LUM3              	6.05%		
Bootstrap support for C4M4I0 as seed ortholog is 100%.
Bootstrap support for Q8ZU64 as seed ortholog is 86%.

Group of orthologs #130. Best score 108 bits
Score difference with first non-orthologous sequence - E.histolytica:57 P.aerophilum:63

C4LT04              	100.00%		Q8ZV43              	100.00%
C4LS98              	43.92%		
Bootstrap support for C4LT04 as seed ortholog is 89%.
Bootstrap support for Q8ZV43 as seed ortholog is 92%.

Group of orthologs #131. Best score 107 bits
Score difference with first non-orthologous sequence - E.histolytica:107 P.aerophilum:107

C4M5A0              	100.00%		Q8ZYE2              	100.00%
Bootstrap support for C4M5A0 as seed ortholog is 100%.
Bootstrap support for Q8ZYE2 as seed ortholog is 100%.

Group of orthologs #132. Best score 106 bits
Score difference with first non-orthologous sequence - E.histolytica:106 P.aerophilum:106

C4MA13              	100.00%		Q8ZTX8              	100.00%
C4LWS0              	98.11%		
Bootstrap support for C4MA13 as seed ortholog is 100%.
Bootstrap support for Q8ZTX8 as seed ortholog is 100%.

Group of orthologs #133. Best score 106 bits
Score difference with first non-orthologous sequence - E.histolytica:47 P.aerophilum:9

C4LWT4              	100.00%		Q8ZYJ6              	100.00%
Bootstrap support for C4LWT4 as seed ortholog is 85%.
Bootstrap support for Q8ZYJ6 as seed ortholog is 55%.
Alternative seed ortholog is Q8ZSU5 (9 bits away from this cluster)

Group of orthologs #134. Best score 105 bits
Score difference with first non-orthologous sequence - E.histolytica:105 P.aerophilum:105

C4LTW9              	100.00%		Q8ZT19              	100.00%
Bootstrap support for C4LTW9 as seed ortholog is 100%.
Bootstrap support for Q8ZT19 as seed ortholog is 100%.

Group of orthologs #135. Best score 104 bits
Score difference with first non-orthologous sequence - E.histolytica:104 P.aerophilum:104

C4LZP6              	100.00%		Q8ZYQ0              	100.00%
C4M2R7              	98.08%		
B1N316              	96.63%		
Bootstrap support for C4LZP6 as seed ortholog is 100%.
Bootstrap support for Q8ZYQ0 as seed ortholog is 100%.

Group of orthologs #136. Best score 104 bits
Score difference with first non-orthologous sequence - E.histolytica:104 P.aerophilum:104

C4LVZ9              	100.00%		Q8ZVA7              	100.00%
C4M9B0              	98.62%		
Bootstrap support for C4LVZ9 as seed ortholog is 100%.
Bootstrap support for Q8ZVA7 as seed ortholog is 100%.

Group of orthologs #137. Best score 104 bits
Score difference with first non-orthologous sequence - E.histolytica:104 P.aerophilum:104

C4M5C6              	100.00%		Q8ZXK7              	100.00%
Bootstrap support for C4M5C6 as seed ortholog is 100%.
Bootstrap support for Q8ZXK7 as seed ortholog is 100%.

Group of orthologs #138. Best score 104 bits
Score difference with first non-orthologous sequence - E.histolytica:104 P.aerophilum:104

C4M7U2              	100.00%		Q8ZWD8              	100.00%
Bootstrap support for C4M7U2 as seed ortholog is 100%.
Bootstrap support for Q8ZWD8 as seed ortholog is 100%.

Group of orthologs #139. Best score 103 bits
Score difference with first non-orthologous sequence - E.histolytica:103 P.aerophilum:21

C4M520              	100.00%		Q8ZXA2              	100.00%
C4M8T2              	59.40%		
C4M4D2              	55.00%		
C4MB19              	41.38%		
Bootstrap support for C4M520 as seed ortholog is 100%.
Bootstrap support for Q8ZXA2 as seed ortholog is 69%.
Alternative seed ortholog is Q8ZV41 (21 bits away from this cluster)

Group of orthologs #140. Best score 103 bits
Score difference with first non-orthologous sequence - E.histolytica:103 P.aerophilum:103

C4LZL5              	100.00%		Q8ZUQ0              	100.00%
Bootstrap support for C4LZL5 as seed ortholog is 100%.
Bootstrap support for Q8ZUQ0 as seed ortholog is 100%.

Group of orthologs #141. Best score 103 bits
Score difference with first non-orthologous sequence - E.histolytica:103 P.aerophilum:34

C4M2I8              	100.00%		Q8ZTM1              	100.00%
Bootstrap support for C4M2I8 as seed ortholog is 100%.
Bootstrap support for Q8ZTM1 as seed ortholog is 85%.

Group of orthologs #142. Best score 102 bits
Score difference with first non-orthologous sequence - E.histolytica:102 P.aerophilum:102

C4M7W2              	100.00%		Q8ZYV2              	31.64%
C4M8C2              	100.00%		Q8ZTH7              	100.00%
B1N503              	53.14%		Q8ZU65              	17.48%
B1N5J0              	42.10%		Q8ZXA1              	9.29%
C4LUT1              	28.19%		
Bootstrap support for C4M7W2 as seed ortholog is 100%.
Bootstrap support for C4M8C2 as seed ortholog is 100%.
Bootstrap support for Q8ZTH7 as seed ortholog is 100%.

Group of orthologs #143. Best score 102 bits
Score difference with first non-orthologous sequence - E.histolytica:36 P.aerophilum:37

C4LVP0              	100.00%		Q8ZYH6              	100.00%
C4M0A1              	33.71%		
Bootstrap support for C4LVP0 as seed ortholog is 92%.
Bootstrap support for Q8ZYH6 as seed ortholog is 90%.

Group of orthologs #144. Best score 101 bits
Score difference with first non-orthologous sequence - E.histolytica:16 P.aerophilum:101

C4LZL2              	100.00%		Q8ZST5              	100.00%
Bootstrap support for C4LZL2 as seed ortholog is 74%.
Alternative seed ortholog is C4LSX4 (16 bits away from this cluster)
Bootstrap support for Q8ZST5 as seed ortholog is 100%.

Group of orthologs #145. Best score 101 bits
Score difference with first non-orthologous sequence - E.histolytica:101 P.aerophilum:101

C4M2Q1              	100.00%		Q8ZTU1              	100.00%
Bootstrap support for C4M2Q1 as seed ortholog is 100%.
Bootstrap support for Q8ZTU1 as seed ortholog is 100%.

Group of orthologs #146. Best score 99 bits
Score difference with first non-orthologous sequence - E.histolytica:99 P.aerophilum:99

C4LXG1              	100.00%		Q8ZX43              	100.00%
C4LXG4              	100.00%		Q8ZTT0              	100.00%
Bootstrap support for C4LXG1 as seed ortholog is 100%.
Bootstrap support for C4LXG4 as seed ortholog is 100%.
Bootstrap support for Q8ZX43 as seed ortholog is 100%.
Bootstrap support for Q8ZTT0 as seed ortholog is 100%.

Group of orthologs #147. Best score 99 bits
Score difference with first non-orthologous sequence - E.histolytica:45 P.aerophilum:99

C4LZ69              	100.00%		Q8ZTA5              	100.00%
C4M8P0              	93.79%		
Bootstrap support for C4LZ69 as seed ortholog is 99%.
Bootstrap support for Q8ZTA5 as seed ortholog is 100%.

Group of orthologs #148. Best score 99 bits
Score difference with first non-orthologous sequence - E.histolytica:99 P.aerophilum:99

C4MA64              	100.00%		Q8ZUM0              	100.00%
C4LU69              	21.52%		
Bootstrap support for C4MA64 as seed ortholog is 100%.
Bootstrap support for Q8ZUM0 as seed ortholog is 100%.

Group of orthologs #149. Best score 98 bits
Score difference with first non-orthologous sequence - E.histolytica:19 P.aerophilum:98

C4LTI2              	100.00%		Q8ZYF2              	100.00%
Bootstrap support for C4LTI2 as seed ortholog is 78%.
Bootstrap support for Q8ZYF2 as seed ortholog is 100%.

Group of orthologs #150. Best score 97 bits
Score difference with first non-orthologous sequence - E.histolytica:97 P.aerophilum:28

C4M6Q4              	100.00%		Q8ZVW7              	100.00%
C4M8W7              	100.00%		
C4MA54              	99.75%		
C4M3Q0              	99.25%		
C4MBP3              	98.50%		
B1N5A8              	98.00%		
C4MAR7              	95.50%		
B1N5L9              	86.00%		
B1N623              	76.25%		
B1N5Y9              	45.00%		
Bootstrap support for C4M6Q4 as seed ortholog is 100%.
Bootstrap support for C4M8W7 as seed ortholog is 100%.
Bootstrap support for Q8ZVW7 as seed ortholog is 77%.

Group of orthologs #151. Best score 97 bits
Score difference with first non-orthologous sequence - E.histolytica:97 P.aerophilum:97

C4LXM0              	100.00%		Q8ZVW0              	100.00%
Bootstrap support for C4LXM0 as seed ortholog is 100%.
Bootstrap support for Q8ZVW0 as seed ortholog is 100%.

Group of orthologs #152. Best score 97 bits
Score difference with first non-orthologous sequence - E.histolytica:11 P.aerophilum:97

C4MAP6              	100.00%		Q7LX31              	100.00%
Bootstrap support for C4MAP6 as seed ortholog is 62%.
Alternative seed ortholog is C4LZG2 (11 bits away from this cluster)
Bootstrap support for Q7LX31 as seed ortholog is 100%.

Group of orthologs #153. Best score 96 bits
Score difference with first non-orthologous sequence - E.histolytica:96 P.aerophilum:96

C4LXT9              	100.00%		Q8ZU06              	100.00%
Bootstrap support for C4LXT9 as seed ortholog is 100%.
Bootstrap support for Q8ZU06 as seed ortholog is 100%.

Group of orthologs #154. Best score 95 bits
Score difference with first non-orthologous sequence - E.histolytica:95 P.aerophilum:95

C4M2Z1              	100.00%		Q8ZWI6              	100.00%
C4M169              	38.99%		
Bootstrap support for C4M2Z1 as seed ortholog is 100%.
Bootstrap support for Q8ZWI6 as seed ortholog is 100%.

Group of orthologs #155. Best score 95 bits
Score difference with first non-orthologous sequence - E.histolytica:23 P.aerophilum:95

C4LSH8              	100.00%		Q8ZVM7              	100.00%
Bootstrap support for C4LSH8 as seed ortholog is 90%.
Bootstrap support for Q8ZVM7 as seed ortholog is 100%.

Group of orthologs #156. Best score 94 bits
Score difference with first non-orthologous sequence - E.histolytica:19 P.aerophilum:94

Q761X1              	100.00%		Q8ZYE4              	100.00%
C4M3C4              	26.86%		
C4LVP9              	12.83%		
C4LV15              	12.47%		
C4LW81              	11.39%		
C4LZF9              	10.43%		
C4M9I7              	9.83%		
C4M110              	9.59%		
C4LXP9              	9.47%		
C4MA18              	8.63%		
Q26334              	7.43%		
C4M7I8              	7.19%		
C4M933              	7.19%		
C4M2W0              	6.95%		
B1N539              	6.83%		
C4LVW8              	6.47%		
C4M4G9              	6.24%		
B1N433              	6.24%		
Q8WQH7              	6.24%		
C4MB42              	6.24%		
C4M6E2              	6.12%		
B1N4I4              	5.40%		
C4LY26              	5.40%		
C4LWL7              	5.04%		
Bootstrap support for Q761X1 as seed ortholog is 67%.
Alternative seed ortholog is C4LVE5 (19 bits away from this cluster)
Bootstrap support for Q8ZYE4 as seed ortholog is 100%.

Group of orthologs #157. Best score 94 bits
Score difference with first non-orthologous sequence - E.histolytica:94 P.aerophilum:94

C4LSF2              	100.00%		Q8ZVD8              	100.00%
C4M8C0              	61.64%		
C4M7S1              	41.78%		
C4M5E7              	37.25%		
C4M4W9              	27.72%		
Bootstrap support for C4LSF2 as seed ortholog is 100%.
Bootstrap support for Q8ZVD8 as seed ortholog is 100%.

Group of orthologs #158. Best score 94 bits
Score difference with first non-orthologous sequence - E.histolytica:94 P.aerophilum:94

C4LU47              	100.00%		Q8ZX02              	100.00%
C4LTP6              	22.91%		
Bootstrap support for C4LU47 as seed ortholog is 100%.
Bootstrap support for Q8ZX02 as seed ortholog is 100%.

Group of orthologs #159. Best score 94 bits
Score difference with first non-orthologous sequence - E.histolytica:94 P.aerophilum:94

C4LW89              	100.00%		Q8ZVN8              	100.00%
Bootstrap support for C4LW89 as seed ortholog is 100%.
Bootstrap support for Q8ZVN8 as seed ortholog is 100%.

Group of orthologs #160. Best score 93 bits
Score difference with first non-orthologous sequence - E.histolytica:93 P.aerophilum:93

C4LXA6              	100.00%		Q8ZYM4              	100.00%
C4MBK7              	18.64%		
C4LZT9              	6.82%		
Bootstrap support for C4LXA6 as seed ortholog is 100%.
Bootstrap support for Q8ZYM4 as seed ortholog is 100%.

Group of orthologs #161. Best score 93 bits
Score difference with first non-orthologous sequence - E.histolytica:11 P.aerophilum:93

C4M182              	100.00%		Q8ZVN0              	100.00%
Bootstrap support for C4M182 as seed ortholog is 37%.
Alternative seed ortholog is C4LZA9 (11 bits away from this cluster)
Bootstrap support for Q8ZVN0 as seed ortholog is 100%.

Group of orthologs #162. Best score 92 bits
Score difference with first non-orthologous sequence - E.histolytica:92 P.aerophilum:92

C4M294              	100.00%		Q8ZVH4              	100.00%
C4M433              	51.42%		
C4M392              	7.13%		
Bootstrap support for C4M294 as seed ortholog is 100%.
Bootstrap support for Q8ZVH4 as seed ortholog is 100%.

Group of orthologs #163. Best score 91 bits
Score difference with first non-orthologous sequence - E.histolytica:91 P.aerophilum:10

C4M5U7              	100.00%		Q8ZVD7              	100.00%
C4M8M9              	16.98%		
Bootstrap support for C4M5U7 as seed ortholog is 100%.
Bootstrap support for Q8ZVD7 as seed ortholog is 57%.
Alternative seed ortholog is Q8ZUG2 (10 bits away from this cluster)

Group of orthologs #164. Best score 91 bits
Score difference with first non-orthologous sequence - E.histolytica:91 P.aerophilum:91

C4LUA0              	100.00%		Q8ZYT6              	100.00%
Bootstrap support for C4LUA0 as seed ortholog is 100%.
Bootstrap support for Q8ZYT6 as seed ortholog is 100%.

Group of orthologs #165. Best score 89 bits
Score difference with first non-orthologous sequence - E.histolytica:89 P.aerophilum:89

C4MB41              	100.00%		Q8ZYP2              	100.00%
B1N540              	99.75%		
C4M7D7              	98.76%		
B1N3Y4              	97.52%		
C4M9Q8              	97.27%		
C4M109              	97.02%		
C4MBB6              	96.77%		
Bootstrap support for C4MB41 as seed ortholog is 100%.
Bootstrap support for Q8ZYP2 as seed ortholog is 100%.

Group of orthologs #166. Best score 89 bits
Score difference with first non-orthologous sequence - E.histolytica:89 P.aerophilum:89

B1N3S0              	100.00%		Q8ZVT8              	100.00%
C4MB76              	100.00%		
Bootstrap support for B1N3S0 as seed ortholog is 100%.
Bootstrap support for C4MB76 as seed ortholog is 100%.
Bootstrap support for Q8ZVT8 as seed ortholog is 100%.

Group of orthologs #167. Best score 89 bits
Score difference with first non-orthologous sequence - E.histolytica:89 P.aerophilum:89

C4LS93              	100.00%		Q8ZVB1              	100.00%
Bootstrap support for C4LS93 as seed ortholog is 100%.
Bootstrap support for Q8ZVB1 as seed ortholog is 100%.

Group of orthologs #168. Best score 89 bits
Score difference with first non-orthologous sequence - E.histolytica:89 P.aerophilum:89

C4LYV7              	100.00%		Q7LX22              	100.00%
Bootstrap support for C4LYV7 as seed ortholog is 100%.
Bootstrap support for Q7LX22 as seed ortholog is 100%.

Group of orthologs #169. Best score 88 bits
Score difference with first non-orthologous sequence - E.histolytica:88 P.aerophilum:88

C4M764              	100.00%		Q7LX30              	100.00%
C4LYM7              	11.86%		
Bootstrap support for C4M764 as seed ortholog is 100%.
Bootstrap support for Q7LX30 as seed ortholog is 100%.

Group of orthologs #170. Best score 87 bits
Score difference with first non-orthologous sequence - E.histolytica:87 P.aerophilum:87

C4M8C4              	100.00%		Q8ZVQ8              	100.00%
C4M3A1              	63.47%		
Bootstrap support for C4M8C4 as seed ortholog is 100%.
Bootstrap support for Q8ZVQ8 as seed ortholog is 100%.

Group of orthologs #171. Best score 87 bits
Score difference with first non-orthologous sequence - E.histolytica:87 P.aerophilum:87

C4LT02              	100.00%		Q8ZWI0              	100.00%
Bootstrap support for C4LT02 as seed ortholog is 100%.
Bootstrap support for Q8ZWI0 as seed ortholog is 100%.

Group of orthologs #172. Best score 87 bits
Score difference with first non-orthologous sequence - E.histolytica:87 P.aerophilum:87

Q6S4W2              	100.00%		Q8ZV53              	100.00%
Bootstrap support for Q6S4W2 as seed ortholog is 100%.
Bootstrap support for Q8ZV53 as seed ortholog is 100%.

Group of orthologs #173. Best score 86 bits
Score difference with first non-orthologous sequence - E.histolytica:86 P.aerophilum:86

C4LTQ5              	100.00%		Q8ZT21              	100.00%
C4M609              	100.00%		
Bootstrap support for C4LTQ5 as seed ortholog is 100%.
Bootstrap support for C4M609 as seed ortholog is 100%.
Bootstrap support for Q8ZT21 as seed ortholog is 100%.

Group of orthologs #174. Best score 86 bits
Score difference with first non-orthologous sequence - E.histolytica:19 P.aerophilum:27

C4LVQ9              	100.00%		Q8ZYG0              	100.00%
                    	       		Q8ZVW5              	5.53%
Bootstrap support for C4LVQ9 as seed ortholog is 76%.
Bootstrap support for Q8ZYG0 as seed ortholog is 81%.

Group of orthologs #175. Best score 86 bits
Score difference with first non-orthologous sequence - E.histolytica:86 P.aerophilum:86

C4LS99              	100.00%		Q8ZTY3              	100.00%
Bootstrap support for C4LS99 as seed ortholog is 100%.
Bootstrap support for Q8ZTY3 as seed ortholog is 100%.

Group of orthologs #176. Best score 85 bits
Score difference with first non-orthologous sequence - E.histolytica:85 P.aerophilum:85

C4M0H9              	100.00%		Q8ZXW9              	100.00%
O15635              	100.00%		
Q401L7              	83.08%		
Bootstrap support for C4M0H9 as seed ortholog is 100%.
Bootstrap support for O15635 as seed ortholog is 100%.
Bootstrap support for Q8ZXW9 as seed ortholog is 100%.

Group of orthologs #177. Best score 85 bits
Score difference with first non-orthologous sequence - E.histolytica:85 P.aerophilum:85

C4M032              	100.00%		Q8ZXL4              	100.00%
Bootstrap support for C4M032 as seed ortholog is 100%.
Bootstrap support for Q8ZXL4 as seed ortholog is 100%.

Group of orthologs #178. Best score 85 bits
Score difference with first non-orthologous sequence - E.histolytica:85 P.aerophilum:85

C4M572              	100.00%		Q8ZX36              	100.00%
Bootstrap support for C4M572 as seed ortholog is 100%.
Bootstrap support for Q8ZX36 as seed ortholog is 100%.

Group of orthologs #179. Best score 84 bits
Score difference with first non-orthologous sequence - E.histolytica:84 P.aerophilum:84

C4LVX4              	100.00%		Q8ZTJ7              	100.00%
C4M214              	5.52%		
Bootstrap support for C4LVX4 as seed ortholog is 100%.
Bootstrap support for Q8ZTJ7 as seed ortholog is 100%.

Group of orthologs #180. Best score 82 bits
Score difference with first non-orthologous sequence - E.histolytica:82 P.aerophilum:82

C4LUW3              	100.00%		Q8ZTV1              	100.00%
O15612              	100.00%		
Bootstrap support for C4LUW3 as seed ortholog is 100%.
Bootstrap support for O15612 as seed ortholog is 100%.
Bootstrap support for Q8ZTV1 as seed ortholog is 100%.

Group of orthologs #181. Best score 82 bits
Score difference with first non-orthologous sequence - E.histolytica:82 P.aerophilum:82

C4LYE0              	100.00%		Q8ZY35              	100.00%
Bootstrap support for C4LYE0 as seed ortholog is 100%.
Bootstrap support for Q8ZY35 as seed ortholog is 100%.

Group of orthologs #182. Best score 82 bits
Score difference with first non-orthologous sequence - E.histolytica:82 P.aerophilum:82

C4M2L7              	100.00%		Q8ZU82              	100.00%
Bootstrap support for C4M2L7 as seed ortholog is 100%.
Bootstrap support for Q8ZU82 as seed ortholog is 100%.

Group of orthologs #183. Best score 81 bits
Score difference with first non-orthologous sequence - E.histolytica:81 P.aerophilum:81

C4LXZ5              	100.00%		Q8ZU24              	100.00%
C4M0M2              	46.45%		
Bootstrap support for C4LXZ5 as seed ortholog is 100%.
Bootstrap support for Q8ZU24 as seed ortholog is 100%.

Group of orthologs #184. Best score 81 bits
Score difference with first non-orthologous sequence - E.histolytica:30 P.aerophilum:81

C4LYI6              	100.00%		Q8ZYZ2              	100.00%
Bootstrap support for C4LYI6 as seed ortholog is 88%.
Bootstrap support for Q8ZYZ2 as seed ortholog is 100%.

Group of orthologs #185. Best score 80 bits
Score difference with first non-orthologous sequence - E.histolytica:80 P.aerophilum:80

B1N2I7              	100.00%		Q8ZTT4              	100.00%
Bootstrap support for B1N2I7 as seed ortholog is 100%.
Bootstrap support for Q8ZTT4 as seed ortholog is 100%.

Group of orthologs #186. Best score 79 bits
Score difference with first non-orthologous sequence - E.histolytica:79 P.aerophilum:79

C4LYJ7              	100.00%		Q8ZXN6              	100.00%
Bootstrap support for C4LYJ7 as seed ortholog is 100%.
Bootstrap support for Q8ZXN6 as seed ortholog is 100%.

Group of orthologs #187. Best score 79 bits
Score difference with first non-orthologous sequence - E.histolytica:79 P.aerophilum:79

C4M0I4              	100.00%		Q8ZZC7              	100.00%
Bootstrap support for C4M0I4 as seed ortholog is 100%.
Bootstrap support for Q8ZZC7 as seed ortholog is 100%.

Group of orthologs #188. Best score 77 bits
Score difference with first non-orthologous sequence - E.histolytica:77 P.aerophilum:77

C4M5V7              	100.00%		Q8ZU80              	100.00%
C4M466              	89.38%		
Bootstrap support for C4M5V7 as seed ortholog is 100%.
Bootstrap support for Q8ZU80 as seed ortholog is 100%.

Group of orthologs #189. Best score 77 bits
Score difference with first non-orthologous sequence - E.histolytica:77 P.aerophilum:77

C4LSI0              	100.00%		Q8ZSW6              	100.00%
Bootstrap support for C4LSI0 as seed ortholog is 100%.
Bootstrap support for Q8ZSW6 as seed ortholog is 100%.

Group of orthologs #190. Best score 77 bits
Score difference with first non-orthologous sequence - E.histolytica:77 P.aerophilum:77

B1N625              	100.00%		Q8ZUS4              	100.00%
Bootstrap support for B1N625 as seed ortholog is 100%.
Bootstrap support for Q8ZUS4 as seed ortholog is 100%.

Group of orthologs #191. Best score 77 bits
Score difference with first non-orthologous sequence - E.histolytica:77 P.aerophilum:77

C4LWZ7              	100.00%		Q8ZXR9              	100.00%
Bootstrap support for C4LWZ7 as seed ortholog is 100%.
Bootstrap support for Q8ZXR9 as seed ortholog is 100%.

Group of orthologs #192. Best score 77 bits
Score difference with first non-orthologous sequence - E.histolytica:77 P.aerophilum:77

C4M554              	100.00%		Q8ZYQ3              	100.00%
Bootstrap support for C4M554 as seed ortholog is 100%.
Bootstrap support for Q8ZYQ3 as seed ortholog is 100%.

Group of orthologs #193. Best score 76 bits
Score difference with first non-orthologous sequence - E.histolytica:76 P.aerophilum:76

C4M0A4              	100.00%		Q8ZTY5              	100.00%
Bootstrap support for C4M0A4 as seed ortholog is 100%.
Bootstrap support for Q8ZTY5 as seed ortholog is 100%.

Group of orthologs #194. Best score 76 bits
Score difference with first non-orthologous sequence - E.histolytica:76 P.aerophilum:76

C4M5J8              	100.00%		Q8ZXZ6              	100.00%
Bootstrap support for C4M5J8 as seed ortholog is 100%.
Bootstrap support for Q8ZXZ6 as seed ortholog is 100%.

Group of orthologs #195. Best score 75 bits
Score difference with first non-orthologous sequence - E.histolytica:75 P.aerophilum:75

C4M978              	100.00%		Q8ZUZ6              	100.00%
C4M0V2              	15.28%		
C4M3D9              	14.85%		
C4M558              	14.74%		
B1N2M5              	14.66%		
C4M007              	12.56%		
C4M9N1              	6.66%		
Bootstrap support for C4M978 as seed ortholog is 100%.
Bootstrap support for Q8ZUZ6 as seed ortholog is 100%.

Group of orthologs #196. Best score 75 bits
Score difference with first non-orthologous sequence - E.histolytica:75 P.aerophilum:75

C4LZZ0              	100.00%		Q8ZYQ6              	100.00%
C4M919              	97.08%		
Bootstrap support for C4LZZ0 as seed ortholog is 100%.
Bootstrap support for Q8ZYQ6 as seed ortholog is 100%.

Group of orthologs #197. Best score 74 bits
Score difference with first non-orthologous sequence - E.histolytica:74 P.aerophilum:74

C4LSZ7              	100.00%		Q8ZTN9              	100.00%
Bootstrap support for C4LSZ7 as seed ortholog is 100%.
Bootstrap support for Q8ZTN9 as seed ortholog is 100%.

Group of orthologs #198. Best score 73 bits
Score difference with first non-orthologous sequence - E.histolytica:73 P.aerophilum:73

Q86S07              	100.00%		Q8ZVB2              	100.00%
C4LSV1              	41.51%		
Q86S08              	40.84%		
Bootstrap support for Q86S07 as seed ortholog is 100%.
Bootstrap support for Q8ZVB2 as seed ortholog is 100%.

Group of orthologs #199. Best score 73 bits
Score difference with first non-orthologous sequence - E.histolytica:73 P.aerophilum:73

C4M5E0              	100.00%		Q8ZXT3              	100.00%
C4M2I9              	5.22%		
Bootstrap support for C4M5E0 as seed ortholog is 100%.
Bootstrap support for Q8ZXT3 as seed ortholog is 100%.

Group of orthologs #200. Best score 72 bits
Score difference with first non-orthologous sequence - E.histolytica:72 P.aerophilum:72

C4LVL2              	100.00%		Q8ZSQ1              	100.00%
Bootstrap support for C4LVL2 as seed ortholog is 100%.
Bootstrap support for Q8ZSQ1 as seed ortholog is 100%.

Group of orthologs #201. Best score 71 bits
Score difference with first non-orthologous sequence - E.histolytica:71 P.aerophilum:71

C4LSZ3              	100.00%		Q8ZVN1              	100.00%
C4M0M9              	97.54%		
Bootstrap support for C4LSZ3 as seed ortholog is 100%.
Bootstrap support for Q8ZVN1 as seed ortholog is 100%.

Group of orthologs #202. Best score 71 bits
Score difference with first non-orthologous sequence - E.histolytica:4 P.aerophilum:71

B1N2Z3              	100.00%		Q8ZTT3              	100.00%
Bootstrap support for B1N2Z3 as seed ortholog is 59%.
Alternative seed ortholog is C4MAY8 (4 bits away from this cluster)
Bootstrap support for Q8ZTT3 as seed ortholog is 100%.

Group of orthologs #203. Best score 71 bits
Score difference with first non-orthologous sequence - E.histolytica:12 P.aerophilum:71

C4M624              	100.00%		Q8ZVL9              	100.00%
Bootstrap support for C4M624 as seed ortholog is 62%.
Alternative seed ortholog is C4LZW3 (12 bits away from this cluster)
Bootstrap support for Q8ZVL9 as seed ortholog is 100%.

Group of orthologs #204. Best score 70 bits
Score difference with first non-orthologous sequence - E.histolytica:70 P.aerophilum:70

C4M569              	100.00%		Q8ZTD4              	100.00%
C4LSU3              	94.12%		
Bootstrap support for C4M569 as seed ortholog is 100%.
Bootstrap support for Q8ZTD4 as seed ortholog is 100%.

Group of orthologs #205. Best score 70 bits
Score difference with first non-orthologous sequence - E.histolytica:25 P.aerophilum:70

C4LWS6              	100.00%		Q8ZYP3              	100.00%
Bootstrap support for C4LWS6 as seed ortholog is 86%.
Bootstrap support for Q8ZYP3 as seed ortholog is 100%.

Group of orthologs #206. Best score 69 bits
Score difference with first non-orthologous sequence - E.histolytica:69 P.aerophilum:69

C4LT96              	100.00%		Q8ZVV9              	100.00%
C4LV05              	100.00%		
C4M2W1              	100.00%		
Bootstrap support for C4LT96 as seed ortholog is 100%.
Bootstrap support for C4LV05 as seed ortholog is 100%.
Bootstrap support for C4M2W1 as seed ortholog is 100%.
Bootstrap support for Q8ZVV9 as seed ortholog is 100%.

Group of orthologs #207. Best score 69 bits
Score difference with first non-orthologous sequence - E.histolytica:69 P.aerophilum:69

B1N386              	100.00%		Q8ZY96              	100.00%
C4M0F0              	100.00%		
Bootstrap support for B1N386 as seed ortholog is 100%.
Bootstrap support for C4M0F0 as seed ortholog is 100%.
Bootstrap support for Q8ZY96 as seed ortholog is 100%.

Group of orthologs #208. Best score 69 bits
Score difference with first non-orthologous sequence - E.histolytica:69 P.aerophilum:69

C4LU86              	100.00%		Q8ZVV8              	100.00%
C4LWJ4              	100.00%		
Bootstrap support for C4LU86 as seed ortholog is 100%.
Bootstrap support for C4LWJ4 as seed ortholog is 100%.
Bootstrap support for Q8ZVV8 as seed ortholog is 100%.

Group of orthologs #209. Best score 69 bits
Score difference with first non-orthologous sequence - E.histolytica:69 P.aerophilum:69

C4LSD9              	100.00%		Q8ZXA6              	100.00%
Bootstrap support for C4LSD9 as seed ortholog is 100%.
Bootstrap support for Q8ZXA6 as seed ortholog is 100%.

Group of orthologs #210. Best score 69 bits
Score difference with first non-orthologous sequence - E.histolytica:69 P.aerophilum:69

C4LXC4              	100.00%		Q8ZYE0              	100.00%
Bootstrap support for C4LXC4 as seed ortholog is 100%.
Bootstrap support for Q8ZYE0 as seed ortholog is 100%.

Group of orthologs #211. Best score 68 bits
Score difference with first non-orthologous sequence - E.histolytica:68 P.aerophilum:68

C4LYI2              	100.00%		Q8ZTP1              	100.00%
Bootstrap support for C4LYI2 as seed ortholog is 100%.
Bootstrap support for Q8ZTP1 as seed ortholog is 100%.

Group of orthologs #212. Best score 67 bits
Score difference with first non-orthologous sequence - E.histolytica:67 P.aerophilum:67

C4LSJ5              	100.00%		P56635              	100.00%
C4LY49              	100.00%		
C4LSM2              	28.79%		
C4LVN8              	28.40%		
Bootstrap support for C4LSJ5 as seed ortholog is 100%.
Bootstrap support for C4LY49 as seed ortholog is 100%.
Bootstrap support for P56635 as seed ortholog is 100%.

Group of orthologs #213. Best score 67 bits
Score difference with first non-orthologous sequence - E.histolytica:67 P.aerophilum:67

C4LW92              	100.00%		Q8ZWL3              	100.00%
C4M979              	100.00%		
Bootstrap support for C4LW92 as seed ortholog is 100%.
Bootstrap support for C4M979 as seed ortholog is 100%.
Bootstrap support for Q8ZWL3 as seed ortholog is 100%.

Group of orthologs #214. Best score 67 bits
Score difference with first non-orthologous sequence - E.histolytica:67 P.aerophilum:67

C4LUR5              	100.00%		Q8ZXZ9              	100.00%
Bootstrap support for C4LUR5 as seed ortholog is 100%.
Bootstrap support for Q8ZXZ9 as seed ortholog is 100%.

Group of orthologs #215. Best score 67 bits
Score difference with first non-orthologous sequence - E.histolytica:67 P.aerophilum:67

C4MAP3              	100.00%		Q8ZV60              	100.00%
Bootstrap support for C4MAP3 as seed ortholog is 100%.
Bootstrap support for Q8ZV60 as seed ortholog is 100%.

Group of orthologs #216. Best score 66 bits
Score difference with first non-orthologous sequence - E.histolytica:66 P.aerophilum:66

B1N3Q9              	100.00%		Q8ZTE5              	100.00%
C4M111              	100.00%		
B1N3Y5              	89.07%		
Bootstrap support for B1N3Q9 as seed ortholog is 100%.
Bootstrap support for C4M111 as seed ortholog is 100%.
Bootstrap support for Q8ZTE5 as seed ortholog is 100%.

Group of orthologs #217. Best score 66 bits
Score difference with first non-orthologous sequence - E.histolytica:66 P.aerophilum:66

C4M3F3              	100.00%		Q8ZYQ1              	100.00%
C4M8M3              	93.43%		
B1N444              	64.00%		
Bootstrap support for C4M3F3 as seed ortholog is 100%.
Bootstrap support for Q8ZYQ1 as seed ortholog is 100%.

Group of orthologs #218. Best score 66 bits
Score difference with first non-orthologous sequence - E.histolytica:26 P.aerophilum:66

C4LSK6              	100.00%		Q8ZXR6              	100.00%
Bootstrap support for C4LSK6 as seed ortholog is 77%.
Bootstrap support for Q8ZXR6 as seed ortholog is 100%.

Group of orthologs #219. Best score 65 bits
Score difference with first non-orthologous sequence - E.histolytica:65 P.aerophilum:65

C4LZS2              	100.00%		Q8ZVQ6              	100.00%
C4M123              	100.00%		
C4M7G9              	100.00%		
Bootstrap support for C4LZS2 as seed ortholog is 100%.
Bootstrap support for C4M123 as seed ortholog is 100%.
Bootstrap support for C4M7G9 as seed ortholog is 100%.
Bootstrap support for Q8ZVQ6 as seed ortholog is 100%.

Group of orthologs #220. Best score 63 bits
Score difference with first non-orthologous sequence - E.histolytica:63 P.aerophilum:63

C4LT83              	100.00%		Q8ZW45              	100.00%
Bootstrap support for C4LT83 as seed ortholog is 100%.
Bootstrap support for Q8ZW45 as seed ortholog is 100%.

Group of orthologs #221. Best score 63 bits
Score difference with first non-orthologous sequence - E.histolytica:63 P.aerophilum:63

C4M003              	100.00%		Q8ZT20              	100.00%
Bootstrap support for C4M003 as seed ortholog is 100%.
Bootstrap support for Q8ZT20 as seed ortholog is 100%.

Group of orthologs #222. Best score 63 bits
Score difference with first non-orthologous sequence - E.histolytica:7 P.aerophilum:63

C4M029              	100.00%		Q8ZWC4              	100.00%
Bootstrap support for C4M029 as seed ortholog is 59%.
Alternative seed ortholog is C4M6X3 (7 bits away from this cluster)
Bootstrap support for Q8ZWC4 as seed ortholog is 100%.

Group of orthologs #223. Best score 63 bits
Score difference with first non-orthologous sequence - E.histolytica:63 P.aerophilum:63

C4M3Y4              	100.00%		Q8ZT63              	100.00%
Bootstrap support for C4M3Y4 as seed ortholog is 100%.
Bootstrap support for Q8ZT63 as seed ortholog is 100%.

Group of orthologs #224. Best score 63 bits
Score difference with first non-orthologous sequence - E.histolytica:63 P.aerophilum:63

C4M5M4              	100.00%		Q8ZYP9              	100.00%
Bootstrap support for C4M5M4 as seed ortholog is 100%.
Bootstrap support for Q8ZYP9 as seed ortholog is 100%.

Group of orthologs #225. Best score 62 bits
Score difference with first non-orthologous sequence - E.histolytica:62 P.aerophilum:62

C4M1K1              	100.00%		Q8ZXL6              	100.00%
B1N370              	71.81%		
Bootstrap support for C4M1K1 as seed ortholog is 100%.
Bootstrap support for Q8ZXL6 as seed ortholog is 100%.

Group of orthologs #226. Best score 62 bits
Score difference with first non-orthologous sequence - E.histolytica:62 P.aerophilum:62

C4LTQ7              	100.00%		Q8ZW27              	100.00%
Bootstrap support for C4LTQ7 as seed ortholog is 100%.
Bootstrap support for Q8ZW27 as seed ortholog is 100%.

Group of orthologs #227. Best score 62 bits
Score difference with first non-orthologous sequence - E.histolytica:62 P.aerophilum:62

C4M9Y2              	100.00%		Q8ZTY6              	100.00%
Bootstrap support for C4M9Y2 as seed ortholog is 100%.
Bootstrap support for Q8ZTY6 as seed ortholog is 100%.

Group of orthologs #228. Best score 62 bits
Score difference with first non-orthologous sequence - E.histolytica:62 P.aerophilum:62

C4M9H3              	100.00%		Q8ZZ46              	100.00%
Bootstrap support for C4M9H3 as seed ortholog is 100%.
Bootstrap support for Q8ZZ46 as seed ortholog is 100%.

Group of orthologs #229. Best score 61 bits
Score difference with first non-orthologous sequence - E.histolytica:61 P.aerophilum:61

C4M0M6              	100.00%		Q8ZWH7              	100.00%
C4LX05              	91.41%		
C4M2J3              	90.38%		
Bootstrap support for C4M0M6 as seed ortholog is 100%.
Bootstrap support for Q8ZWH7 as seed ortholog is 100%.

Group of orthologs #230. Best score 61 bits
Score difference with first non-orthologous sequence - E.histolytica:61 P.aerophilum:61

C4LXH0              	100.00%		Q8ZT55              	100.00%
                    	       		Q8ZSW5              	9.68%
Bootstrap support for C4LXH0 as seed ortholog is 100%.
Bootstrap support for Q8ZT55 as seed ortholog is 100%.

Group of orthologs #231. Best score 61 bits
Score difference with first non-orthologous sequence - E.histolytica:61 P.aerophilum:61

C4M0S1              	100.00%		Q8ZYT2              	100.00%
                    	       		Q8ZW13              	14.00%
Bootstrap support for C4M0S1 as seed ortholog is 100%.
Bootstrap support for Q8ZYT2 as seed ortholog is 100%.

Group of orthologs #232. Best score 61 bits
Score difference with first non-orthologous sequence - E.histolytica:61 P.aerophilum:61

C4LV64              	100.00%		Q8ZW50              	100.00%
Bootstrap support for C4LV64 as seed ortholog is 100%.
Bootstrap support for Q8ZW50 as seed ortholog is 100%.

Group of orthologs #233. Best score 61 bits
Score difference with first non-orthologous sequence - E.histolytica:61 P.aerophilum:61

C4LXZ6              	100.00%		Q8ZYH2              	100.00%
Bootstrap support for C4LXZ6 as seed ortholog is 100%.
Bootstrap support for Q8ZYH2 as seed ortholog is 100%.

Group of orthologs #234. Best score 61 bits
Score difference with first non-orthologous sequence - E.histolytica:16 P.aerophilum:61

C4M8P1              	100.00%		Q8ZTX9              	100.00%
Bootstrap support for C4M8P1 as seed ortholog is 71%.
Alternative seed ortholog is C4M9T4 (16 bits away from this cluster)
Bootstrap support for Q8ZTX9 as seed ortholog is 100%.

Group of orthologs #235. Best score 61 bits
Score difference with first non-orthologous sequence - E.histolytica:61 P.aerophilum:61

C4MB82              	100.00%		Q8ZWP9              	100.00%
Bootstrap support for C4MB82 as seed ortholog is 100%.
Bootstrap support for Q8ZWP9 as seed ortholog is 100%.

Group of orthologs #236. Best score 60 bits
Score difference with first non-orthologous sequence - E.histolytica:60 P.aerophilum:60

C4LVB9              	100.00%		Q8ZZH3              	100.00%
Bootstrap support for C4LVB9 as seed ortholog is 100%.
Bootstrap support for Q8ZZH3 as seed ortholog is 100%.

Group of orthologs #237. Best score 60 bits
Score difference with first non-orthologous sequence - E.histolytica:60 P.aerophilum:60

C4M1U6              	100.00%		Q8ZZH1              	100.00%
Bootstrap support for C4M1U6 as seed ortholog is 100%.
Bootstrap support for Q8ZZH1 as seed ortholog is 100%.

Group of orthologs #238. Best score 59 bits
Score difference with first non-orthologous sequence - E.histolytica:59 P.aerophilum:59

C4MA09              	100.00%		Q8ZXN8              	100.00%
C4M938              	97.73%		
C4M751              	96.21%		
C4LYV2              	95.71%		
Bootstrap support for C4MA09 as seed ortholog is 100%.
Bootstrap support for Q8ZXN8 as seed ortholog is 100%.

Group of orthologs #239. Best score 59 bits
Score difference with first non-orthologous sequence - E.histolytica:59 P.aerophilum:59

C4LZQ8              	100.00%		Q8ZTA7              	100.00%
C4M059              	100.00%		
Bootstrap support for C4LZQ8 as seed ortholog is 100%.
Bootstrap support for C4M059 as seed ortholog is 100%.
Bootstrap support for Q8ZTA7 as seed ortholog is 100%.

Group of orthologs #240. Best score 59 bits
Score difference with first non-orthologous sequence - E.histolytica:59 P.aerophilum:59

C4LW10              	100.00%		Q8ZVW1              	100.00%
Bootstrap support for C4LW10 as seed ortholog is 100%.
Bootstrap support for Q8ZVW1 as seed ortholog is 100%.

Group of orthologs #241. Best score 59 bits
Score difference with first non-orthologous sequence - E.histolytica:59 P.aerophilum:59

C4M1Q8              	100.00%		Q8ZT08              	100.00%
Bootstrap support for C4M1Q8 as seed ortholog is 100%.
Bootstrap support for Q8ZT08 as seed ortholog is 100%.

Group of orthologs #242. Best score 58 bits
Score difference with first non-orthologous sequence - E.histolytica:58 P.aerophilum:58

B1N3F8              	100.00%		Q8ZT50              	100.00%
B1N420              	98.84%		
C4M7V3              	87.64%		
Bootstrap support for B1N3F8 as seed ortholog is 100%.
Bootstrap support for Q8ZT50 as seed ortholog is 100%.

Group of orthologs #243. Best score 58 bits
Score difference with first non-orthologous sequence - E.histolytica:58 P.aerophilum:58

C4LT66              	100.00%		Q8ZTY4              	100.00%
C4LYP4              	100.00%		
C4LSR1              	96.69%		
Bootstrap support for C4LT66 as seed ortholog is 100%.
Bootstrap support for C4LYP4 as seed ortholog is 100%.
Bootstrap support for Q8ZTY4 as seed ortholog is 100%.

Group of orthologs #244. Best score 57 bits
Score difference with first non-orthologous sequence - E.histolytica:57 P.aerophilum:57

C4LTW8              	100.00%		Q8ZTC0              	100.00%
C4M8X8              	5.98%		Q8ZWS3              	10.73%
Bootstrap support for C4LTW8 as seed ortholog is 100%.
Bootstrap support for Q8ZTC0 as seed ortholog is 100%.

Group of orthologs #245. Best score 57 bits
Score difference with first non-orthologous sequence - E.histolytica:57 P.aerophilum:57

C4M803              	100.00%		Q8ZYJ4              	100.00%
C4LTZ0              	36.86%		
Bootstrap support for C4M803 as seed ortholog is 100%.
Bootstrap support for Q8ZYJ4 as seed ortholog is 100%.

Group of orthologs #246. Best score 57 bits
Score difference with first non-orthologous sequence - E.histolytica:57 P.aerophilum:57

C4MA46              	100.00%		Q8ZTE8              	100.00%
Bootstrap support for C4MA46 as seed ortholog is 100%.
Bootstrap support for Q8ZTE8 as seed ortholog is 100%.

Group of orthologs #247. Best score 56 bits
Score difference with first non-orthologous sequence - E.histolytica:56 P.aerophilum:56

C4M534              	100.00%		Q8ZTC2              	100.00%
Bootstrap support for C4M534 as seed ortholog is 100%.
Bootstrap support for Q8ZTC2 as seed ortholog is 100%.

Group of orthologs #248. Best score 56 bits
Score difference with first non-orthologous sequence - E.histolytica:56 P.aerophilum:56

C4M6S1              	100.00%		Q8ZTF9              	100.00%
Bootstrap support for C4M6S1 as seed ortholog is 100%.
Bootstrap support for Q8ZTF9 as seed ortholog is 100%.

Group of orthologs #249. Best score 56 bits
Score difference with first non-orthologous sequence - E.histolytica:56 P.aerophilum:56

C4M472              	100.00%		Q8ZW23              	100.00%
Bootstrap support for C4M472 as seed ortholog is 100%.
Bootstrap support for Q8ZW23 as seed ortholog is 100%.

Group of orthologs #250. Best score 55 bits
Score difference with first non-orthologous sequence - E.histolytica:55 P.aerophilum:55

C4M8X1              	100.00%		Q8ZZ08              	100.00%
                    	       		Q8ZZ14              	39.41%
                    	       		Q8ZZ21              	39.16%
                    	       		Q8ZY72              	30.30%
Bootstrap support for C4M8X1 as seed ortholog is 100%.
Bootstrap support for Q8ZZ08 as seed ortholog is 100%.

Group of orthologs #251. Best score 55 bits
Score difference with first non-orthologous sequence - E.histolytica:55 P.aerophilum:55

C4M1J2              	100.00%		Q8ZU30              	100.00%
Bootstrap support for C4M1J2 as seed ortholog is 100%.
Bootstrap support for Q8ZU30 as seed ortholog is 100%.

Group of orthologs #252. Best score 54 bits
Score difference with first non-orthologous sequence - E.histolytica:54 P.aerophilum:54

C4LV69              	100.00%		Q8ZTB5              	100.00%
C4LWK0              	99.65%		
Bootstrap support for C4LV69 as seed ortholog is 100%.
Bootstrap support for Q8ZTB5 as seed ortholog is 100%.

Group of orthologs #253. Best score 54 bits
Score difference with first non-orthologous sequence - E.histolytica:14 P.aerophilum:54

C4LXK0              	100.00%		Q8ZTW0              	100.00%
C4M4C6              	8.73%		
Bootstrap support for C4LXK0 as seed ortholog is 67%.
Alternative seed ortholog is C4MA15 (14 bits away from this cluster)
Bootstrap support for Q8ZTW0 as seed ortholog is 100%.

Group of orthologs #254. Best score 54 bits
Score difference with first non-orthologous sequence - E.histolytica:54 P.aerophilum:5

C4LV91              	100.00%		Q8ZYA3              	100.00%
B1N617              	58.77%		
Bootstrap support for C4LV91 as seed ortholog is 100%.
Bootstrap support for Q8ZYA3 as seed ortholog is 60%.
Alternative seed ortholog is Q8ZUL0 (5 bits away from this cluster)

Group of orthologs #255. Best score 53 bits
Score difference with first non-orthologous sequence - E.histolytica:53 P.aerophilum:53

C4LVF7              	100.00%		Q8ZYX3              	100.00%
C4M4F2              	78.69%		
Bootstrap support for C4LVF7 as seed ortholog is 100%.
Bootstrap support for Q8ZYX3 as seed ortholog is 100%.

Group of orthologs #256. Best score 52 bits
Score difference with first non-orthologous sequence - E.histolytica:52 P.aerophilum:52

C4M0Z2              	100.00%		Q8ZYF4              	100.00%
C4M7N8              	100.00%		
C4M0P7              	98.89%		
Bootstrap support for C4M0Z2 as seed ortholog is 100%.
Bootstrap support for C4M7N8 as seed ortholog is 100%.
Bootstrap support for Q8ZYF4 as seed ortholog is 100%.

Group of orthologs #257. Best score 51 bits
Score difference with first non-orthologous sequence - E.histolytica:51 P.aerophilum:51

C4M1A7              	100.00%		Q8ZXZ5              	100.00%
Bootstrap support for C4M1A7 as seed ortholog is 100%.
Bootstrap support for Q8ZXZ5 as seed ortholog is 100%.

Group of orthologs #258. Best score 50 bits
Score difference with first non-orthologous sequence - E.histolytica:50 P.aerophilum:50

C4M9L1              	100.00%		Q8ZT04              	100.00%
C4M4Q5              	80.00%		
C4M9D2              	5.98%		
Bootstrap support for C4M9L1 as seed ortholog is 100%.
Bootstrap support for Q8ZT04 as seed ortholog is 100%.

Group of orthologs #259. Best score 49 bits
Score difference with first non-orthologous sequence - E.histolytica:49 P.aerophilum:49

C4LWR3              	100.00%		Q8ZTF5              	100.00%
                    	       		Q8ZXX6              	33.58%
Bootstrap support for C4LWR3 as seed ortholog is 100%.
Bootstrap support for Q8ZTF5 as seed ortholog is 100%.

Group of orthologs #260. Best score 48 bits
Score difference with first non-orthologous sequence - E.histolytica:4 P.aerophilum:48

C4LSH4              	100.00%		Q8ZYG5              	100.00%
Bootstrap support for C4LSH4 as seed ortholog is 63%.
Alternative seed ortholog is C4M187 (4 bits away from this cluster)
Bootstrap support for Q8ZYG5 as seed ortholog is 100%.

Group of orthologs #261. Best score 47 bits
Score difference with first non-orthologous sequence - E.histolytica:47 P.aerophilum:47

C4LSS0              	100.00%		Q8ZVI7              	100.00%
Bootstrap support for C4LSS0 as seed ortholog is 100%.
Bootstrap support for Q8ZVI7 as seed ortholog is 100%.

Group of orthologs #262. Best score 47 bits
Score difference with first non-orthologous sequence - E.histolytica:47 P.aerophilum:47

C4M4Y8              	100.00%		Q8ZTK3              	100.00%
Bootstrap support for C4M4Y8 as seed ortholog is 100%.
Bootstrap support for Q8ZTK3 as seed ortholog is 100%.

Group of orthologs #263. Best score 46 bits
Score difference with first non-orthologous sequence - E.histolytica:46 P.aerophilum:46

C4LWQ7              	100.00%		Q8ZVY7              	100.00%
C4LV62              	18.40%		
Bootstrap support for C4LWQ7 as seed ortholog is 100%.
Bootstrap support for Q8ZVY7 as seed ortholog is 100%.

Group of orthologs #264. Best score 46 bits
Score difference with first non-orthologous sequence - E.histolytica:46 P.aerophilum:46

C4LTV3              	100.00%		Q8ZSV9              	100.00%
Bootstrap support for C4LTV3 as seed ortholog is 100%.
Bootstrap support for Q8ZSV9 as seed ortholog is 100%.

Group of orthologs #265. Best score 46 bits
Score difference with first non-orthologous sequence - E.histolytica:46 P.aerophilum:46

C4M3W8              	100.00%		Q8ZWT7              	100.00%
Bootstrap support for C4M3W8 as seed ortholog is 100%.
Bootstrap support for Q8ZWT7 as seed ortholog is 100%.

Group of orthologs #266. Best score 45 bits
Score difference with first non-orthologous sequence - E.histolytica:45 P.aerophilum:45

C4M3T9              	100.00%		Q8ZVH6              	100.00%
B1N2P0              	45.23%		
B1N621              	41.18%		
C4M5I6              	28.61%		
C4M8K3              	24.13%		
C4LWT9              	17.49%		
C4LZS8              	15.61%		
C4LSY0              	8.67%		
C4M3P3              	7.08%		
Bootstrap support for C4M3T9 as seed ortholog is 100%.
Bootstrap support for Q8ZVH6 as seed ortholog is 100%.

Group of orthologs #267. Best score 44 bits
Score difference with first non-orthologous sequence - E.histolytica:44 P.aerophilum:44

C4LXZ8              	100.00%		Q8ZVX6              	100.00%
C4MAX0              	30.58%		Q8ZTZ2              	6.88%
C4M6W0              	16.73%		
C4LTZ5              	13.27%		
Bootstrap support for C4LXZ8 as seed ortholog is 100%.
Bootstrap support for Q8ZVX6 as seed ortholog is 100%.

Group of orthologs #268. Best score 43 bits
Score difference with first non-orthologous sequence - E.histolytica:43 P.aerophilum:43

Q5NT41              	100.00%		Q8ZTH2              	100.00%
Q9BLF2              	51.45%		Q8ZT06              	54.24%
Q5NT40              	43.27%		Q8ZTE7              	45.39%
Q6AW59              	38.52%		Q8ZW60              	27.31%
Q5NT39              	38.26%		Q8ZT74              	25.09%
Q5NT38              	35.09%		Q8ZUH0              	23.62%
Q9BLF3              	31.93%		
Q963D1              	31.40%		
C4MA07              	31.13%		
Q5NT37              	31.13%		
Q5NSZ7              	29.55%		
Q9NDI3              	29.02%		
Q5NT42              	27.70%		
Q5NT36              	27.44%		
B1N372              	27.18%		
Q5NT03              	26.91%		
Q6AW60              	26.65%		
Q9BLE4              	26.39%		
Q5NT27              	25.59%		
Q5NT28              	25.33%		
Q5NT43              	25.07%		
C4LXP5              	24.80%		
C4M2C0              	24.54%		
Q5NT02              	24.01%		
C4M2S0              	24.01%		
Q6AW62              	23.75%		
C4M1Y3              	23.22%		
Q5NSZ0              	22.69%		
Q5NT30              	22.16%		
Q9BLE9              	21.64%		
Q5NSY2              	21.37%		
Q6AW65              	21.37%		
Q5NT15              	21.11%		
Q9BLE8              	20.84%		
Q5NT05              	20.32%		
C4M5L8              	20.05%		
Q5NT31              	20.05%		
Q5NT00              	20.05%		
Q6AW64              	19.79%		
Q5NSZ2              	19.79%		
C4LWN8              	19.79%		
B1N4G8              	19.53%		
Q5NT33              	19.53%		
C4LYX3              	19.26%		
C4MBH0              	19.26%		
Q5NSZ3              	18.73%		
Q9BLF0              	18.73%		
Q5NT14              	17.94%		
Q5NT44              	17.94%		
Q5NT13              	17.94%		
Q9BLE2              	17.94%		
Q9BLE6              	17.94%		
Q9BLE7              	17.94%		
Q6AW61              	17.94%		
Q5NT18              	17.68%		
Q5NT19              	17.41%		
B1N2Z4              	17.41%		
C4M6F3              	17.41%		
Q5NSY5              	17.15%		
Q5NT32              	17.15%		
Q6AW67              	17.15%		
Q5NT01              	16.89%		
Q5NT21              	16.89%		
Q5NT26              	16.89%		
C4M3R0              	16.62%		
C4LYJ8              	16.09%		
Q5NSZ1              	16.09%		
Q9BLE5              	16.09%		
C4LTM9              	16.09%		
C4M717              	15.83%		
C4M1G5              	15.83%		
Q5NT17              	15.57%		
C4M535              	15.57%		
Q5NT23              	15.57%		
C4LSY9              	15.30%		
Q5NT22              	14.78%		
Q5NSY0              	14.25%		
Q6AW63              	14.25%		
Q5NT16              	13.98%		
C4M081              	13.98%		
Q5NT07              	13.98%		
C4M3K3              	13.46%		
Q5NSY1              	12.93%		
C4LTJ7              	12.93%		
B1N354              	12.93%		
C4M761              	12.66%		
C4M292              	11.61%		
C4M5Q7              	11.61%		
C4M9T7              	11.61%		
C4MAI1              	11.61%		
C4MA96              	11.35%		
C4M7S5              	11.35%		
C4MA80              	11.08%		
C4M9S3              	11.08%		
Q5NT11              	11.08%		
C4M855              	10.82%		
C4M5Z7              	10.55%		
C4M1V0              	10.29%		
C4M8K6              	10.29%		
C4M0Y0              	10.29%		
C4M4W4              	10.29%		
C4LX92              	10.03%		
Q769I9              	9.76%		
C4LU06              	9.50%		
C4M468              	9.50%		
B1N2R7              	9.23%		
C4LTL7              	9.23%		
Q5NT10              	9.23%		
C4LZV2              	8.97%		
B1N2J6              	8.97%		
C4M5G1              	8.97%		
C4M5F8              	8.71%		
C4M8B0              	8.71%		
Q24806              	8.71%		
Q5NSZ9              	8.71%		
Q5NT08              	8.71%		
C4LZJ5              	8.71%		
C4M5T0              	8.71%		
C4M8B7              	8.44%		
Q5NT06              	8.44%		
C4M0X3              	7.92%		
C4LUT2              	7.92%		
C4M588              	7.92%		
B1N5I9              	7.65%		
C4MAS8              	7.65%		
C4LW15              	7.65%		
B1N567              	7.39%		
C4M6J2              	5.80%		
Q5NT24              	5.28%		
Bootstrap support for Q5NT41 as seed ortholog is 100%.
Bootstrap support for Q8ZTH2 as seed ortholog is 100%.

Group of orthologs #269. Best score 43 bits
Score difference with first non-orthologous sequence - E.histolytica:43 P.aerophilum:43

C4M4I4              	100.00%		Q8ZYP8              	100.00%
Bootstrap support for C4M4I4 as seed ortholog is 100%.
Bootstrap support for Q8ZYP8 as seed ortholog is 100%.

Group of orthologs #270. Best score 42 bits
Score difference with first non-orthologous sequence - E.histolytica:42 P.aerophilum:42

C4LZ57              	100.00%		Q8ZWR6              	100.00%
Bootstrap support for C4LZ57 as seed ortholog is 100%.
Bootstrap support for Q8ZWR6 as seed ortholog is 100%.

Group of orthologs #271. Best score 41 bits
Score difference with first non-orthologous sequence - E.histolytica:41 P.aerophilum:41

C4LV03              	100.00%		Q8ZVI1              	100.00%
Bootstrap support for C4LV03 as seed ortholog is 100%.
Bootstrap support for Q8ZVI1 as seed ortholog is 100%.