###################################
546 groups of orthologs
554 in-paralogs from E.cuniculi
603 in-paralogs from P.jiroveci
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 1510 bits
Score difference with first non-orthologous sequence - E.cuniculi:1510 P.jiroveci:1510

Q8SSC4              	100.00%		L0PB90              	100.00%
Bootstrap support for Q8SSC4 as seed ortholog is 100%.
Bootstrap support for L0PB90 as seed ortholog is 100%.

Group of orthologs #2. Best score 1277 bits
Score difference with first non-orthologous sequence - E.cuniculi:1277 P.jiroveci:1277

Q8SS63              	100.00%		L0P818              	100.00%
Bootstrap support for Q8SS63 as seed ortholog is 100%.
Bootstrap support for L0P818 as seed ortholog is 100%.

Group of orthologs #3. Best score 1127 bits
Score difference with first non-orthologous sequence - E.cuniculi:400 P.jiroveci:1127

Q8SQY8              	100.00%		L0PG77              	100.00%
Bootstrap support for Q8SQY8 as seed ortholog is 100%.
Bootstrap support for L0PG77 as seed ortholog is 100%.

Group of orthologs #4. Best score 1089 bits
Score difference with first non-orthologous sequence - E.cuniculi:1089 P.jiroveci:1089

Q8SRM3              	100.00%		L0PB43              	100.00%
Bootstrap support for Q8SRM3 as seed ortholog is 100%.
Bootstrap support for L0PB43 as seed ortholog is 100%.

Group of orthologs #5. Best score 884 bits
Score difference with first non-orthologous sequence - E.cuniculi:884 P.jiroveci:884

Q8SR23              	100.00%		L0PGJ4              	100.00%
Bootstrap support for Q8SR23 as seed ortholog is 100%.
Bootstrap support for L0PGJ4 as seed ortholog is 100%.

Group of orthologs #6. Best score 827 bits
Score difference with first non-orthologous sequence - E.cuniculi:827 P.jiroveci:827

Q8SR37              	100.00%		L0PBY6              	100.00%
Bootstrap support for Q8SR37 as seed ortholog is 100%.
Bootstrap support for L0PBY6 as seed ortholog is 100%.

Group of orthologs #7. Best score 818 bits
Score difference with first non-orthologous sequence - E.cuniculi:818 P.jiroveci:818

Q8SQP5              	100.00%		L0PDK3              	100.00%
Bootstrap support for Q8SQP5 as seed ortholog is 100%.
Bootstrap support for L0PDK3 as seed ortholog is 100%.

Group of orthologs #8. Best score 815 bits
Score difference with first non-orthologous sequence - E.cuniculi:815 P.jiroveci:327

Q8SS35              	100.00%		L0PDI4              	100.00%
Bootstrap support for Q8SS35 as seed ortholog is 100%.
Bootstrap support for L0PDI4 as seed ortholog is 100%.

Group of orthologs #9. Best score 788 bits
Score difference with first non-orthologous sequence - E.cuniculi:788 P.jiroveci:788

Q8SUI9              	100.00%		L0PEL4              	100.00%
Bootstrap support for Q8SUI9 as seed ortholog is 100%.
Bootstrap support for L0PEL4 as seed ortholog is 100%.

Group of orthologs #10. Best score 767 bits
Score difference with first non-orthologous sequence - E.cuniculi:767 P.jiroveci:767

Q8SVU6              	100.00%		L0PCQ0              	100.00%
Bootstrap support for Q8SVU6 as seed ortholog is 100%.
Bootstrap support for L0PCQ0 as seed ortholog is 100%.

Group of orthologs #11. Best score 758 bits
Score difference with first non-orthologous sequence - E.cuniculi:758 P.jiroveci:645

Q8SQL4              	100.00%		L0PAG9              	100.00%
Bootstrap support for Q8SQL4 as seed ortholog is 100%.
Bootstrap support for L0PAG9 as seed ortholog is 100%.

Group of orthologs #12. Best score 757 bits
Score difference with first non-orthologous sequence - E.cuniculi:757 P.jiroveci:656

Q8SQU9              	100.00%		L0PH89              	100.00%
Bootstrap support for Q8SQU9 as seed ortholog is 100%.
Bootstrap support for L0PH89 as seed ortholog is 100%.

Group of orthologs #13. Best score 735 bits
Score difference with first non-orthologous sequence - E.cuniculi:366 P.jiroveci:735

Q8SSB7              	100.00%		L0P9P7              	100.00%
Bootstrap support for Q8SSB7 as seed ortholog is 100%.
Bootstrap support for L0P9P7 as seed ortholog is 100%.

Group of orthologs #14. Best score 722 bits
Score difference with first non-orthologous sequence - E.cuniculi:722 P.jiroveci:722

Q8SUP3              	100.00%		L0PFF9              	100.00%
Bootstrap support for Q8SUP3 as seed ortholog is 100%.
Bootstrap support for L0PFF9 as seed ortholog is 100%.

Group of orthologs #15. Best score 698 bits
Score difference with first non-orthologous sequence - E.cuniculi:363 P.jiroveci:698

Q8SS99              	100.00%		L0PBR4              	100.00%
Bootstrap support for Q8SS99 as seed ortholog is 100%.
Bootstrap support for L0PBR4 as seed ortholog is 100%.

Group of orthologs #16. Best score 695 bits
Score difference with first non-orthologous sequence - E.cuniculi:227 P.jiroveci:695

Q8SS39              	100.00%		L0PEW0              	100.00%
Bootstrap support for Q8SS39 as seed ortholog is 99%.
Bootstrap support for L0PEW0 as seed ortholog is 100%.

Group of orthologs #17. Best score 690 bits
Score difference with first non-orthologous sequence - E.cuniculi:690 P.jiroveci:161

Q8SS27              	100.00%		L0PDB3              	100.00%
Bootstrap support for Q8SS27 as seed ortholog is 100%.
Bootstrap support for L0PDB3 as seed ortholog is 99%.

Group of orthologs #18. Best score 684 bits
Score difference with first non-orthologous sequence - E.cuniculi:684 P.jiroveci:348

Q8SU15              	100.00%		L0PDF1              	100.00%
Bootstrap support for Q8SU15 as seed ortholog is 100%.
Bootstrap support for L0PDF1 as seed ortholog is 100%.

Group of orthologs #19. Best score 683 bits
Score difference with first non-orthologous sequence - E.cuniculi:516 P.jiroveci:683

Q8SRT4              	100.00%		L0PD55              	100.00%
Bootstrap support for Q8SRT4 as seed ortholog is 100%.
Bootstrap support for L0PD55 as seed ortholog is 100%.

Group of orthologs #20. Best score 678 bits
Score difference with first non-orthologous sequence - E.cuniculi:678 P.jiroveci:678

Q8SRI2              	100.00%		L0PAS8              	100.00%
Bootstrap support for Q8SRI2 as seed ortholog is 100%.
Bootstrap support for L0PAS8 as seed ortholog is 100%.

Group of orthologs #21. Best score 636 bits
Score difference with first non-orthologous sequence - E.cuniculi:636 P.jiroveci:238

Q8SUC5              	100.00%		L0PG21              	100.00%
Bootstrap support for Q8SUC5 as seed ortholog is 100%.
Bootstrap support for L0PG21 as seed ortholog is 99%.

Group of orthologs #22. Best score 634 bits
Score difference with first non-orthologous sequence - E.cuniculi:634 P.jiroveci:567

Q8SSK1              	100.00%		L0P7X5              	100.00%
Bootstrap support for Q8SSK1 as seed ortholog is 100%.
Bootstrap support for L0P7X5 as seed ortholog is 100%.

Group of orthologs #23. Best score 616 bits
Score difference with first non-orthologous sequence - E.cuniculi:616 P.jiroveci:165

Q8SQJ7              	100.00%		L0PGL4              	100.00%
                    	       		L0P7Q7              	33.23%
Bootstrap support for Q8SQJ7 as seed ortholog is 100%.
Bootstrap support for L0PGL4 as seed ortholog is 99%.

Group of orthologs #24. Best score 614 bits
Score difference with first non-orthologous sequence - E.cuniculi:614 P.jiroveci:614

Q8SS94              	100.00%		L0PCK0              	100.00%
                    	       		L0P7U1              	99.27%
Bootstrap support for Q8SS94 as seed ortholog is 100%.
Bootstrap support for L0PCK0 as seed ortholog is 100%.

Group of orthologs #25. Best score 609 bits
Score difference with first non-orthologous sequence - E.cuniculi:244 P.jiroveci:131

O96772              	100.00%		L0PFS2              	100.00%
Bootstrap support for O96772 as seed ortholog is 100%.
Bootstrap support for L0PFS2 as seed ortholog is 99%.

Group of orthologs #26. Best score 591 bits
Score difference with first non-orthologous sequence - E.cuniculi:591 P.jiroveci:400

Q8SQV6              	100.00%		L0PBQ6              	100.00%
Bootstrap support for Q8SQV6 as seed ortholog is 100%.
Bootstrap support for L0PBQ6 as seed ortholog is 100%.

Group of orthologs #27. Best score 582 bits
Score difference with first non-orthologous sequence - E.cuniculi:508 P.jiroveci:203

Q8SWN8              	100.00%		L0PA91              	100.00%
Bootstrap support for Q8SWN8 as seed ortholog is 100%.
Bootstrap support for L0PA91 as seed ortholog is 100%.

Group of orthologs #28. Best score 580 bits
Score difference with first non-orthologous sequence - E.cuniculi:580 P.jiroveci:580

Q8SQQ6              	100.00%		L0PEP7              	100.00%
Bootstrap support for Q8SQQ6 as seed ortholog is 100%.
Bootstrap support for L0PEP7 as seed ortholog is 100%.

Group of orthologs #29. Best score 563 bits
Score difference with first non-orthologous sequence - E.cuniculi:563 P.jiroveci:563

Q8SS15              	100.00%		L0PAP2              	100.00%
Bootstrap support for Q8SS15 as seed ortholog is 100%.
Bootstrap support for L0PAP2 as seed ortholog is 100%.

Group of orthologs #30. Best score 557 bits
Score difference with first non-orthologous sequence - E.cuniculi:413 P.jiroveci:557

Q8SS42              	100.00%		L0PA62              	100.00%
Bootstrap support for Q8SS42 as seed ortholog is 100%.
Bootstrap support for L0PA62 as seed ortholog is 100%.

Group of orthologs #31. Best score 554 bits
Score difference with first non-orthologous sequence - E.cuniculi:554 P.jiroveci:554

Q8SSE5              	100.00%		L0PD31              	100.00%
Bootstrap support for Q8SSE5 as seed ortholog is 100%.
Bootstrap support for L0PD31 as seed ortholog is 100%.

Group of orthologs #32. Best score 543 bits
Score difference with first non-orthologous sequence - E.cuniculi:543 P.jiroveci:221

Q8SRH2              	100.00%		L0P9U5              	100.00%
Bootstrap support for Q8SRH2 as seed ortholog is 100%.
Bootstrap support for L0P9U5 as seed ortholog is 99%.

Group of orthologs #33. Best score 542 bits
Score difference with first non-orthologous sequence - E.cuniculi:345 P.jiroveci:542

Q8SRS4              	100.00%		L0PG32              	100.00%
Bootstrap support for Q8SRS4 as seed ortholog is 100%.
Bootstrap support for L0PG32 as seed ortholog is 100%.

Group of orthologs #34. Best score 530 bits
Score difference with first non-orthologous sequence - E.cuniculi:313 P.jiroveci:530

Q8SRF0              	100.00%		L0PBV5              	100.00%
Bootstrap support for Q8SRF0 as seed ortholog is 100%.
Bootstrap support for L0PBV5 as seed ortholog is 100%.

Group of orthologs #35. Best score 525 bits
Score difference with first non-orthologous sequence - E.cuniculi:525 P.jiroveci:525

Q8SSE8              	100.00%		L0PAW9              	100.00%
                    	       		L0PBZ0              	83.35%
Bootstrap support for Q8SSE8 as seed ortholog is 100%.
Bootstrap support for L0PAW9 as seed ortholog is 100%.

Group of orthologs #36. Best score 525 bits
Score difference with first non-orthologous sequence - E.cuniculi:525 P.jiroveci:525

Q8SR02              	100.00%		L0P928              	100.00%
Bootstrap support for Q8SR02 as seed ortholog is 100%.
Bootstrap support for L0P928 as seed ortholog is 100%.

Group of orthologs #37. Best score 515 bits
Score difference with first non-orthologous sequence - E.cuniculi:515 P.jiroveci:515

Q8SSD4              	100.00%		L0PDQ4              	100.00%
Bootstrap support for Q8SSD4 as seed ortholog is 100%.
Bootstrap support for L0PDQ4 as seed ortholog is 100%.

Group of orthologs #38. Best score 513 bits
Score difference with first non-orthologous sequence - E.cuniculi:258 P.jiroveci:152

Q8SR00              	100.00%		L0PF72              	100.00%
Bootstrap support for Q8SR00 as seed ortholog is 100%.
Bootstrap support for L0PF72 as seed ortholog is 97%.

Group of orthologs #39. Best score 506 bits
Score difference with first non-orthologous sequence - E.cuniculi:408 P.jiroveci:428

Q8SRP9              	100.00%		L0PGA5              	100.00%
Bootstrap support for Q8SRP9 as seed ortholog is 100%.
Bootstrap support for L0PGA5 as seed ortholog is 100%.

Group of orthologs #40. Best score 499 bits
Score difference with first non-orthologous sequence - E.cuniculi:499 P.jiroveci:209

Q8SS56              	100.00%		L0PFG7              	100.00%
Bootstrap support for Q8SS56 as seed ortholog is 100%.
Bootstrap support for L0PFG7 as seed ortholog is 99%.

Group of orthologs #41. Best score 491 bits
Score difference with first non-orthologous sequence - E.cuniculi:491 P.jiroveci:491

Q8SVF0              	100.00%		L0PF66              	100.00%
Bootstrap support for Q8SVF0 as seed ortholog is 100%.
Bootstrap support for L0PF66 as seed ortholog is 100%.

Group of orthologs #42. Best score 485 bits
Score difference with first non-orthologous sequence - E.cuniculi:159 P.jiroveci:185

Q8SS80              	100.00%		L0PCK5              	100.00%
Bootstrap support for Q8SS80 as seed ortholog is 100%.
Bootstrap support for L0PCK5 as seed ortholog is 100%.

Group of orthologs #43. Best score 481 bits
Score difference with first non-orthologous sequence - E.cuniculi:278 P.jiroveci:481

Q8SQL8              	100.00%		L0PG07              	100.00%
Bootstrap support for Q8SQL8 as seed ortholog is 99%.
Bootstrap support for L0PG07 as seed ortholog is 100%.

Group of orthologs #44. Best score 478 bits
Score difference with first non-orthologous sequence - E.cuniculi:240 P.jiroveci:128

Q8SQX8              	100.00%		L0PBH4              	100.00%
Bootstrap support for Q8SQX8 as seed ortholog is 100%.
Bootstrap support for L0PBH4 as seed ortholog is 99%.

Group of orthologs #45. Best score 475 bits
Score difference with first non-orthologous sequence - E.cuniculi:380 P.jiroveci:475

Q8SSC9              	100.00%		L0P945              	100.00%
Bootstrap support for Q8SSC9 as seed ortholog is 100%.
Bootstrap support for L0P945 as seed ortholog is 100%.

Group of orthologs #46. Best score 473 bits
Score difference with first non-orthologous sequence - E.cuniculi:473 P.jiroveci:397

Q8SRS8              	100.00%		L0P915              	100.00%
Bootstrap support for Q8SRS8 as seed ortholog is 100%.
Bootstrap support for L0P915 as seed ortholog is 100%.

Group of orthologs #47. Best score 471 bits
Score difference with first non-orthologous sequence - E.cuniculi:471 P.jiroveci:471

Q8SQU0              	100.00%		L0P9C7              	100.00%
Bootstrap support for Q8SQU0 as seed ortholog is 100%.
Bootstrap support for L0P9C7 as seed ortholog is 100%.

Group of orthologs #48. Best score 465 bits
Score difference with first non-orthologous sequence - E.cuniculi:465 P.jiroveci:465

Q8SQZ6              	100.00%		L0PA45              	100.00%
Bootstrap support for Q8SQZ6 as seed ortholog is 100%.
Bootstrap support for L0PA45 as seed ortholog is 100%.

Group of orthologs #49. Best score 461 bits
Score difference with first non-orthologous sequence - E.cuniculi:215 P.jiroveci:461

Q8SRK4              	100.00%		L0PBL6              	100.00%
Bootstrap support for Q8SRK4 as seed ortholog is 100%.
Bootstrap support for L0PBL6 as seed ortholog is 100%.

Group of orthologs #50. Best score 451 bits
Score difference with first non-orthologous sequence - E.cuniculi:451 P.jiroveci:451

Q8SR40              	100.00%		L0P9S1              	100.00%
Bootstrap support for Q8SR40 as seed ortholog is 100%.
Bootstrap support for L0P9S1 as seed ortholog is 100%.

Group of orthologs #51. Best score 450 bits
Score difference with first non-orthologous sequence - E.cuniculi:450 P.jiroveci:450

Q8SQS2              	100.00%		L0P6Y2              	100.00%
Bootstrap support for Q8SQS2 as seed ortholog is 100%.
Bootstrap support for L0P6Y2 as seed ortholog is 100%.

Group of orthologs #52. Best score 438 bits
Score difference with first non-orthologous sequence - E.cuniculi:32 P.jiroveci:130

Q8SQQ2              	100.00%		L0PAJ7              	100.00%
                    	       		L0PFC8              	12.84%
                    	       		L0PB13              	10.25%
                    	       		L0P9U6              	7.90%
                    	       		L0PAB1              	7.16%
Bootstrap support for Q8SQQ2 as seed ortholog is 72%.
Alternative seed ortholog is Q8SQW7 (32 bits away from this cluster)
Bootstrap support for L0PAJ7 as seed ortholog is 99%.

Group of orthologs #53. Best score 438 bits
Score difference with first non-orthologous sequence - E.cuniculi:346 P.jiroveci:438

Q8SR76              	100.00%		L0P976              	100.00%
Bootstrap support for Q8SR76 as seed ortholog is 100%.
Bootstrap support for L0P976 as seed ortholog is 100%.

Group of orthologs #54. Best score 436 bits
Score difference with first non-orthologous sequence - E.cuniculi:436 P.jiroveci:436

Q8SU86              	100.00%		L0PFU4              	100.00%
Bootstrap support for Q8SU86 as seed ortholog is 100%.
Bootstrap support for L0PFU4 as seed ortholog is 100%.

Group of orthologs #55. Best score 434 bits
Score difference with first non-orthologous sequence - E.cuniculi:169 P.jiroveci:71

Q8SS50              	100.00%		L0P7D9              	100.00%
Bootstrap support for Q8SS50 as seed ortholog is 100%.
Bootstrap support for L0P7D9 as seed ortholog is 97%.

Group of orthologs #56. Best score 433 bits
Score difference with first non-orthologous sequence - E.cuniculi:433 P.jiroveci:129

Q8SQX0              	100.00%		L0PDH7              	100.00%
Bootstrap support for Q8SQX0 as seed ortholog is 100%.
Bootstrap support for L0PDH7 as seed ortholog is 99%.

Group of orthologs #57. Best score 433 bits
Score difference with first non-orthologous sequence - E.cuniculi:433 P.jiroveci:433

Q8SVJ8              	100.00%		L0PCV7              	100.00%
Bootstrap support for Q8SVJ8 as seed ortholog is 100%.
Bootstrap support for L0PCV7 as seed ortholog is 100%.

Group of orthologs #58. Best score 427 bits
Score difference with first non-orthologous sequence - E.cuniculi:427 P.jiroveci:375

Q8SRG9              	100.00%		L0PER3              	100.00%
Bootstrap support for Q8SRG9 as seed ortholog is 100%.
Bootstrap support for L0PER3 as seed ortholog is 100%.

Group of orthologs #59. Best score 424 bits
Score difference with first non-orthologous sequence - E.cuniculi:424 P.jiroveci:284

Q8SRX7              	100.00%		L0PAA4              	100.00%
Bootstrap support for Q8SRX7 as seed ortholog is 100%.
Bootstrap support for L0PAA4 as seed ortholog is 100%.

Group of orthologs #60. Best score 421 bits
Score difference with first non-orthologous sequence - E.cuniculi:320 P.jiroveci:421

Q8SQP2              	100.00%		L0PER6              	100.00%
Bootstrap support for Q8SQP2 as seed ortholog is 100%.
Bootstrap support for L0PER6 as seed ortholog is 100%.

Group of orthologs #61. Best score 416 bits
Score difference with first non-orthologous sequence - E.cuniculi:416 P.jiroveci:416

Q8SSE4              	100.00%		L0PH85              	100.00%
Bootstrap support for Q8SSE4 as seed ortholog is 100%.
Bootstrap support for L0PH85 as seed ortholog is 100%.

Group of orthologs #62. Best score 410 bits
Score difference with first non-orthologous sequence - E.cuniculi:294 P.jiroveci:128

Q8SQP6              	100.00%		L0P8Y6              	100.00%
Bootstrap support for Q8SQP6 as seed ortholog is 100%.
Bootstrap support for L0P8Y6 as seed ortholog is 99%.

Group of orthologs #63. Best score 409 bits
Score difference with first non-orthologous sequence - E.cuniculi:312 P.jiroveci:409

Q8SR53              	100.00%		L0PG45              	100.00%
Bootstrap support for Q8SR53 as seed ortholog is 100%.
Bootstrap support for L0PG45 as seed ortholog is 100%.

Group of orthologs #64. Best score 408 bits
Score difference with first non-orthologous sequence - E.cuniculi:408 P.jiroveci:408

Q8SRW0              	100.00%		L0P8W6              	100.00%
Bootstrap support for Q8SRW0 as seed ortholog is 100%.
Bootstrap support for L0P8W6 as seed ortholog is 100%.

Group of orthologs #65. Best score 406 bits
Score difference with first non-orthologous sequence - E.cuniculi:406 P.jiroveci:406

Q8SRX5              	100.00%		L0P6X8              	100.00%
Bootstrap support for Q8SRX5 as seed ortholog is 100%.
Bootstrap support for L0P6X8 as seed ortholog is 100%.

Group of orthologs #66. Best score 406 bits
Score difference with first non-orthologous sequence - E.cuniculi:352 P.jiroveci:406

Q8SSC5              	100.00%		L0P9C8              	100.00%
Bootstrap support for Q8SSC5 as seed ortholog is 100%.
Bootstrap support for L0P9C8 as seed ortholog is 100%.

Group of orthologs #67. Best score 400 bits
Score difference with first non-orthologous sequence - E.cuniculi:400 P.jiroveci:30

Q8SQT7              	100.00%		L0P8C8              	100.00%
Bootstrap support for Q8SQT7 as seed ortholog is 100%.
Bootstrap support for L0P8C8 as seed ortholog is 73%.
Alternative seed ortholog is L0PBE4 (30 bits away from this cluster)

Group of orthologs #68. Best score 393 bits
Score difference with first non-orthologous sequence - E.cuniculi:303 P.jiroveci:393

Q8SS36              	100.00%		L0PFN9              	100.00%
                    	       		L0PEF0              	11.86%
Bootstrap support for Q8SS36 as seed ortholog is 100%.
Bootstrap support for L0PFN9 as seed ortholog is 100%.

Group of orthologs #69. Best score 393 bits
Score difference with first non-orthologous sequence - E.cuniculi:393 P.jiroveci:393

Q8SS31              	100.00%		L0P8R6              	100.00%
Bootstrap support for Q8SS31 as seed ortholog is 100%.
Bootstrap support for L0P8R6 as seed ortholog is 100%.

Group of orthologs #70. Best score 391 bits
Score difference with first non-orthologous sequence - E.cuniculi:391 P.jiroveci:290

Q8SR34              	100.00%		L0P7M4              	100.00%
                    	       		L0PH62              	53.64%
Bootstrap support for Q8SR34 as seed ortholog is 100%.
Bootstrap support for L0P7M4 as seed ortholog is 100%.

Group of orthologs #71. Best score 391 bits
Score difference with first non-orthologous sequence - E.cuniculi:391 P.jiroveci:391

O62585              	100.00%		L0PCX1              	100.00%
Bootstrap support for O62585 as seed ortholog is 100%.
Bootstrap support for L0PCX1 as seed ortholog is 100%.

Group of orthologs #72. Best score 391 bits
Score difference with first non-orthologous sequence - E.cuniculi:391 P.jiroveci:391

Q8SR10              	100.00%		L0PED9              	100.00%
Bootstrap support for Q8SR10 as seed ortholog is 100%.
Bootstrap support for L0PED9 as seed ortholog is 100%.

Group of orthologs #73. Best score 391 bits
Score difference with first non-orthologous sequence - E.cuniculi:391 P.jiroveci:37

Q8SWP7              	100.00%		L0PB85              	100.00%
Bootstrap support for Q8SWP7 as seed ortholog is 100%.
Bootstrap support for L0PB85 as seed ortholog is 73%.
Alternative seed ortholog is L0PD69 (37 bits away from this cluster)

Group of orthologs #74. Best score 389 bits
Score difference with first non-orthologous sequence - E.cuniculi:389 P.jiroveci:389

Q8SQK3              	100.00%		L0PC79              	100.00%
Bootstrap support for Q8SQK3 as seed ortholog is 100%.
Bootstrap support for L0PC79 as seed ortholog is 100%.

Group of orthologs #75. Best score 388 bits
Score difference with first non-orthologous sequence - E.cuniculi:388 P.jiroveci:155

Q8SSD9              	100.00%		L0PGE8              	100.00%
Bootstrap support for Q8SSD9 as seed ortholog is 100%.
Bootstrap support for L0PGE8 as seed ortholog is 99%.

Group of orthologs #76. Best score 384 bits
Score difference with first non-orthologous sequence - E.cuniculi:384 P.jiroveci:384

Q8SQI7              	100.00%		L0PC65              	100.00%
Bootstrap support for Q8SQI7 as seed ortholog is 100%.
Bootstrap support for L0PC65 as seed ortholog is 100%.

Group of orthologs #77. Best score 384 bits
Score difference with first non-orthologous sequence - E.cuniculi:384 P.jiroveci:384

Q8SSE3              	100.00%		L0PFQ5              	100.00%
Bootstrap support for Q8SSE3 as seed ortholog is 100%.
Bootstrap support for L0PFQ5 as seed ortholog is 100%.

Group of orthologs #78. Best score 381 bits
Score difference with first non-orthologous sequence - E.cuniculi:381 P.jiroveci:381

Q8SSG2              	100.00%		L0PE98              	100.00%
Bootstrap support for Q8SSG2 as seed ortholog is 100%.
Bootstrap support for L0PE98 as seed ortholog is 100%.

Group of orthologs #79. Best score 378 bits
Score difference with first non-orthologous sequence - E.cuniculi:378 P.jiroveci:262

Q8SRQ0              	100.00%		L0PG61              	100.00%
                    	       		L0PAC9              	13.57%
Bootstrap support for Q8SRQ0 as seed ortholog is 100%.
Bootstrap support for L0PG61 as seed ortholog is 100%.

Group of orthologs #80. Best score 378 bits
Score difference with first non-orthologous sequence - E.cuniculi:378 P.jiroveci:378

Q8SW47              	100.00%		L0PC37              	100.00%
Bootstrap support for Q8SW47 as seed ortholog is 100%.
Bootstrap support for L0PC37 as seed ortholog is 100%.

Group of orthologs #81. Best score 377 bits
Score difference with first non-orthologous sequence - E.cuniculi:158 P.jiroveci:377

Q8SRD2              	100.00%		L0PAR0              	100.00%
Bootstrap support for Q8SRD2 as seed ortholog is 99%.
Bootstrap support for L0PAR0 as seed ortholog is 100%.

Group of orthologs #82. Best score 376 bits
Score difference with first non-orthologous sequence - E.cuniculi:376 P.jiroveci:376

Q8SSI1              	100.00%		L0PCS2              	100.00%
Bootstrap support for Q8SSI1 as seed ortholog is 100%.
Bootstrap support for L0PCS2 as seed ortholog is 100%.

Group of orthologs #83. Best score 374 bits
Score difference with first non-orthologous sequence - E.cuniculi:374 P.jiroveci:374

Q8SQI3              	100.00%		L0P9D4              	100.00%
Bootstrap support for Q8SQI3 as seed ortholog is 100%.
Bootstrap support for L0P9D4 as seed ortholog is 100%.

Group of orthologs #84. Best score 373 bits
Score difference with first non-orthologous sequence - E.cuniculi:159 P.jiroveci:373

Q8SUE4              	100.00%		L0PB12              	100.00%
Bootstrap support for Q8SUE4 as seed ortholog is 99%.
Bootstrap support for L0PB12 as seed ortholog is 100%.

Group of orthologs #85. Best score 361 bits
Score difference with first non-orthologous sequence - E.cuniculi:361 P.jiroveci:361

Q8SUH2              	100.00%		L0PC54              	100.00%
Bootstrap support for Q8SUH2 as seed ortholog is 100%.
Bootstrap support for L0PC54 as seed ortholog is 100%.

Group of orthologs #86. Best score 360 bits
Score difference with first non-orthologous sequence - E.cuniculi:360 P.jiroveci:246

Q8STM3              	100.00%		L0PCS3              	100.00%
Bootstrap support for Q8STM3 as seed ortholog is 100%.
Bootstrap support for L0PCS3 as seed ortholog is 100%.

Group of orthologs #87. Best score 359 bits
Score difference with first non-orthologous sequence - E.cuniculi:359 P.jiroveci:236

Q8SRH4              	100.00%		L0PIF0              	100.00%
Bootstrap support for Q8SRH4 as seed ortholog is 100%.
Bootstrap support for L0PIF0 as seed ortholog is 99%.

Group of orthologs #88. Best score 349 bits
Score difference with first non-orthologous sequence - E.cuniculi:176 P.jiroveci:194

Q8SQK9              	100.00%		L0P853              	100.00%
                    	       		L0P8M8              	72.06%
Bootstrap support for Q8SQK9 as seed ortholog is 100%.
Bootstrap support for L0P853 as seed ortholog is 100%.

Group of orthologs #89. Best score 344 bits
Score difference with first non-orthologous sequence - E.cuniculi:344 P.jiroveci:344

Q8SRY1              	100.00%		L0P8P8              	100.00%
Bootstrap support for Q8SRY1 as seed ortholog is 100%.
Bootstrap support for L0P8P8 as seed ortholog is 100%.

Group of orthologs #90. Best score 341 bits
Score difference with first non-orthologous sequence - E.cuniculi:341 P.jiroveci:157

Q8SS48              	100.00%		L0PAU1              	100.00%
Bootstrap support for Q8SS48 as seed ortholog is 100%.
Bootstrap support for L0PAU1 as seed ortholog is 99%.

Group of orthologs #91. Best score 340 bits
Score difference with first non-orthologous sequence - E.cuniculi:340 P.jiroveci:340

Q8SRD8              	100.00%		L0PCW8              	100.00%
Bootstrap support for Q8SRD8 as seed ortholog is 100%.
Bootstrap support for L0PCW8 as seed ortholog is 100%.

Group of orthologs #92. Best score 334 bits
Score difference with first non-orthologous sequence - E.cuniculi:334 P.jiroveci:334

Q8SRV7              	100.00%		L0PAH2              	100.00%
Bootstrap support for Q8SRV7 as seed ortholog is 100%.
Bootstrap support for L0PAH2 as seed ortholog is 100%.

Group of orthologs #93. Best score 330 bits
Score difference with first non-orthologous sequence - E.cuniculi:208 P.jiroveci:243

Q8SQJ6              	100.00%		L0PC93              	100.00%
Bootstrap support for Q8SQJ6 as seed ortholog is 100%.
Bootstrap support for L0PC93 as seed ortholog is 99%.

Group of orthologs #94. Best score 330 bits
Score difference with first non-orthologous sequence - E.cuniculi:330 P.jiroveci:330

Q8SQY3              	100.00%		L0PCN1              	100.00%
Bootstrap support for Q8SQY3 as seed ortholog is 100%.
Bootstrap support for L0PCN1 as seed ortholog is 100%.

Group of orthologs #95. Best score 329 bits
Score difference with first non-orthologous sequence - E.cuniculi:273 P.jiroveci:329

Q8SRI7              	100.00%		L0PFY2              	100.00%
Bootstrap support for Q8SRI7 as seed ortholog is 100%.
Bootstrap support for L0PFY2 as seed ortholog is 100%.

Group of orthologs #96. Best score 324 bits
Score difference with first non-orthologous sequence - E.cuniculi:324 P.jiroveci:324

Q8SQM4              	100.00%		L0PF49              	100.00%
Bootstrap support for Q8SQM4 as seed ortholog is 100%.
Bootstrap support for L0PF49 as seed ortholog is 100%.

Group of orthologs #97. Best score 323 bits
Score difference with first non-orthologous sequence - E.cuniculi:323 P.jiroveci:226

Q8SW96              	100.00%		L0PGE3              	100.00%
                    	       		L0PEY7              	42.47%
Bootstrap support for Q8SW96 as seed ortholog is 100%.
Bootstrap support for L0PGE3 as seed ortholog is 100%.

Group of orthologs #98. Best score 323 bits
Score difference with first non-orthologous sequence - E.cuniculi:323 P.jiroveci:323

Q8SRZ1              	100.00%		L0PBA8              	100.00%
Bootstrap support for Q8SRZ1 as seed ortholog is 100%.
Bootstrap support for L0PBA8 as seed ortholog is 100%.

Group of orthologs #99. Best score 320 bits
Score difference with first non-orthologous sequence - E.cuniculi:115 P.jiroveci:55

Q8SR86              	100.00%		L0PAY3              	100.00%
Bootstrap support for Q8SR86 as seed ortholog is 99%.
Bootstrap support for L0PAY3 as seed ortholog is 96%.

Group of orthologs #100. Best score 318 bits
Score difference with first non-orthologous sequence - E.cuniculi:318 P.jiroveci:236

Q8SRN3              	100.00%		L0P7N1              	100.00%
Bootstrap support for Q8SRN3 as seed ortholog is 100%.
Bootstrap support for L0P7N1 as seed ortholog is 100%.

Group of orthologs #101. Best score 317 bits
Score difference with first non-orthologous sequence - E.cuniculi:317 P.jiroveci:80

Q8SR51              	100.00%		L0PFY3              	100.00%
Bootstrap support for Q8SR51 as seed ortholog is 100%.
Bootstrap support for L0PFY3 as seed ortholog is 98%.

Group of orthologs #102. Best score 316 bits
Score difference with first non-orthologous sequence - E.cuniculi:316 P.jiroveci:316

Q8SQQ3              	100.00%		L0PIR9              	100.00%
Bootstrap support for Q8SQQ3 as seed ortholog is 100%.
Bootstrap support for L0PIR9 as seed ortholog is 100%.

Group of orthologs #103. Best score 311 bits
Score difference with first non-orthologous sequence - E.cuniculi:311 P.jiroveci:214

Q8SRQ8              	100.00%		L0P7R1              	100.00%
Bootstrap support for Q8SRQ8 as seed ortholog is 100%.
Bootstrap support for L0P7R1 as seed ortholog is 100%.

Group of orthologs #104. Best score 311 bits
Score difference with first non-orthologous sequence - E.cuniculi:311 P.jiroveci:311

Q8SQR0              	100.00%		L0PAI0              	100.00%
Bootstrap support for Q8SQR0 as seed ortholog is 100%.
Bootstrap support for L0PAI0 as seed ortholog is 100%.

Group of orthologs #105. Best score 310 bits
Score difference with first non-orthologous sequence - E.cuniculi:310 P.jiroveci:310

Q8SR42              	100.00%		L0PFQ8              	100.00%
Bootstrap support for Q8SR42 as seed ortholog is 100%.
Bootstrap support for L0PFQ8 as seed ortholog is 100%.

Group of orthologs #106. Best score 309 bits
Score difference with first non-orthologous sequence - E.cuniculi:309 P.jiroveci:309

Q8SRR3              	100.00%		L0PCY5              	100.00%
Bootstrap support for Q8SRR3 as seed ortholog is 100%.
Bootstrap support for L0PCY5 as seed ortholog is 100%.

Group of orthologs #107. Best score 309 bits
Score difference with first non-orthologous sequence - E.cuniculi:309 P.jiroveci:309

Q8SRX1              	100.00%		L0PHB7              	100.00%
Bootstrap support for Q8SRX1 as seed ortholog is 100%.
Bootstrap support for L0PHB7 as seed ortholog is 100%.

Group of orthologs #108. Best score 303 bits
Score difference with first non-orthologous sequence - E.cuniculi:303 P.jiroveci:209

O96719              	100.00%		L0PB35              	100.00%
Bootstrap support for O96719 as seed ortholog is 100%.
Bootstrap support for L0PB35 as seed ortholog is 100%.

Group of orthologs #109. Best score 302 bits
Score difference with first non-orthologous sequence - E.cuniculi:85 P.jiroveci:5

Q8SRB2              	100.00%		L0P7L0              	100.00%
                    	       		L0PCI7              	100.00%
Bootstrap support for Q8SRB2 as seed ortholog is 98%.
Bootstrap support for L0P7L0 as seed ortholog is 68%.
Alternative seed ortholog is L0PDY0 (5 bits away from this cluster)
Bootstrap support for L0PCI7 as seed ortholog is 57%.
Alternative seed ortholog is L0PDY0 (5 bits away from this cluster)

Group of orthologs #110. Best score 300 bits
Score difference with first non-orthologous sequence - E.cuniculi:300 P.jiroveci:300

Q8SS26              	100.00%		L0PDT0              	100.00%
Bootstrap support for Q8SS26 as seed ortholog is 100%.
Bootstrap support for L0PDT0 as seed ortholog is 100%.

Group of orthologs #111. Best score 300 bits
Score difference with first non-orthologous sequence - E.cuniculi:128 P.jiroveci:110

Q8SW92              	100.00%		L0PF10              	100.00%
Bootstrap support for Q8SW92 as seed ortholog is 99%.
Bootstrap support for L0PF10 as seed ortholog is 99%.

Group of orthologs #112. Best score 299 bits
Score difference with first non-orthologous sequence - E.cuniculi:215 P.jiroveci:170

Q8SRU0              	100.00%		L0PE30              	100.00%
Bootstrap support for Q8SRU0 as seed ortholog is 100%.
Bootstrap support for L0PE30 as seed ortholog is 100%.

Group of orthologs #113. Best score 298 bits
Score difference with first non-orthologous sequence - E.cuniculi:298 P.jiroveci:115

Q8SQK8              	100.00%		L0PEL0              	100.00%
Bootstrap support for Q8SQK8 as seed ortholog is 100%.
Bootstrap support for L0PEL0 as seed ortholog is 99%.

Group of orthologs #114. Best score 296 bits
Score difference with first non-orthologous sequence - E.cuniculi:296 P.jiroveci:158

Q8SWM6              	100.00%		L0P942              	100.00%
                    	       		L0P7J6              	61.55%
Bootstrap support for Q8SWM6 as seed ortholog is 100%.
Bootstrap support for L0P942 as seed ortholog is 99%.

Group of orthologs #115. Best score 296 bits
Score difference with first non-orthologous sequence - E.cuniculi:45 P.jiroveci:296

Q8SRA9              	100.00%		L0PE41              	100.00%
Bootstrap support for Q8SRA9 as seed ortholog is 65%.
Alternative seed ortholog is Q8SSE9 (45 bits away from this cluster)
Bootstrap support for L0PE41 as seed ortholog is 100%.

Group of orthologs #116. Best score 296 bits
Score difference with first non-orthologous sequence - E.cuniculi:296 P.jiroveci:296

Q8SSA3              	100.00%		L0PEQ8              	100.00%
Bootstrap support for Q8SSA3 as seed ortholog is 100%.
Bootstrap support for L0PEQ8 as seed ortholog is 100%.

Group of orthologs #117. Best score 294 bits
Score difference with first non-orthologous sequence - E.cuniculi:294 P.jiroveci:294

Q8SRK1              	100.00%		L0P992              	100.00%
Bootstrap support for Q8SRK1 as seed ortholog is 100%.
Bootstrap support for L0P992 as seed ortholog is 100%.

Group of orthologs #118. Best score 294 bits
Score difference with first non-orthologous sequence - E.cuniculi:71 P.jiroveci:119

Q8SQL0              	100.00%		L0PHY6              	100.00%
Bootstrap support for Q8SQL0 as seed ortholog is 97%.
Bootstrap support for L0PHY6 as seed ortholog is 99%.

Group of orthologs #119. Best score 293 bits
Score difference with first non-orthologous sequence - E.cuniculi:293 P.jiroveci:293

Q8SSK0              	100.00%		L0P921              	100.00%
Bootstrap support for Q8SSK0 as seed ortholog is 100%.
Bootstrap support for L0P921 as seed ortholog is 100%.

Group of orthologs #120. Best score 289 bits
Score difference with first non-orthologous sequence - E.cuniculi:289 P.jiroveci:289

Q8SW15              	100.00%		L0P7L7              	100.00%
Bootstrap support for Q8SW15 as seed ortholog is 100%.
Bootstrap support for L0P7L7 as seed ortholog is 100%.

Group of orthologs #121. Best score 286 bits
Score difference with first non-orthologous sequence - E.cuniculi:286 P.jiroveci:286

Q8SS59              	100.00%		L0P8G8              	100.00%
Bootstrap support for Q8SS59 as seed ortholog is 100%.
Bootstrap support for L0P8G8 as seed ortholog is 100%.

Group of orthologs #122. Best score 286 bits
Score difference with first non-orthologous sequence - E.cuniculi:286 P.jiroveci:286

Q8SSJ2              	100.00%		L0PCR2              	100.00%
Bootstrap support for Q8SSJ2 as seed ortholog is 100%.
Bootstrap support for L0PCR2 as seed ortholog is 100%.

Group of orthologs #123. Best score 284 bits
Score difference with first non-orthologous sequence - E.cuniculi:284 P.jiroveci:284

O62584              	100.00%		L0PA65              	100.00%
Q8SRG2              	100.00%		
Bootstrap support for O62584 as seed ortholog is 100%.
Bootstrap support for Q8SRG2 as seed ortholog is 100%.
Bootstrap support for L0PA65 as seed ortholog is 100%.

Group of orthologs #124. Best score 284 bits
Score difference with first non-orthologous sequence - E.cuniculi:284 P.jiroveci:284

Q8SR45              	100.00%		L0PB50              	100.00%
Bootstrap support for Q8SR45 as seed ortholog is 100%.
Bootstrap support for L0PB50 as seed ortholog is 100%.

Group of orthologs #125. Best score 282 bits
Score difference with first non-orthologous sequence - E.cuniculi:282 P.jiroveci:282

Q8SRT8              	100.00%		L0PE52              	100.00%
                    	       		L0PIN5              	52.68%
Bootstrap support for Q8SRT8 as seed ortholog is 100%.
Bootstrap support for L0PE52 as seed ortholog is 100%.

Group of orthologs #126. Best score 280 bits
Score difference with first non-orthologous sequence - E.cuniculi:211 P.jiroveci:280

Q8SRL3              	100.00%		L0P871              	100.00%
                    	       		L0PAC4              	99.42%
Bootstrap support for Q8SRL3 as seed ortholog is 99%.
Bootstrap support for L0P871 as seed ortholog is 100%.

Group of orthologs #127. Best score 279 bits
Score difference with first non-orthologous sequence - E.cuniculi:279 P.jiroveci:279

Q8SR55              	100.00%		L0P8A6              	100.00%
Bootstrap support for Q8SR55 as seed ortholog is 100%.
Bootstrap support for L0P8A6 as seed ortholog is 100%.

Group of orthologs #128. Best score 277 bits
Score difference with first non-orthologous sequence - E.cuniculi:131 P.jiroveci:232

Q8SS96              	100.00%		L0P890              	100.00%
                    	       		L0PH29              	9.92%
Bootstrap support for Q8SS96 as seed ortholog is 99%.
Bootstrap support for L0P890 as seed ortholog is 100%.

Group of orthologs #129. Best score 276 bits
Score difference with first non-orthologous sequence - E.cuniculi:276 P.jiroveci:131

Q8SS29              	100.00%		L0PBA5              	100.00%
Bootstrap support for Q8SS29 as seed ortholog is 100%.
Bootstrap support for L0PBA5 as seed ortholog is 99%.

Group of orthologs #130. Best score 274 bits
Score difference with first non-orthologous sequence - E.cuniculi:274 P.jiroveci:274

Q8SRE0              	100.00%		L0PC44              	100.00%
Bootstrap support for Q8SRE0 as seed ortholog is 100%.
Bootstrap support for L0PC44 as seed ortholog is 100%.

Group of orthologs #131. Best score 272 bits
Score difference with first non-orthologous sequence - E.cuniculi:272 P.jiroveci:48

Q8SR47              	100.00%		L0PA63              	100.00%
Bootstrap support for Q8SR47 as seed ortholog is 100%.
Bootstrap support for L0PA63 as seed ortholog is 82%.

Group of orthologs #132. Best score 272 bits
Score difference with first non-orthologous sequence - E.cuniculi:272 P.jiroveci:272

Q8SUH1              	100.00%		L0PG34              	100.00%
Bootstrap support for Q8SUH1 as seed ortholog is 100%.
Bootstrap support for L0PG34 as seed ortholog is 100%.

Group of orthologs #133. Best score 270 bits
Score difference with first non-orthologous sequence - E.cuniculi:189 P.jiroveci:270

Q8SRR6              	100.00%		L0PGS4              	100.00%
Bootstrap support for Q8SRR6 as seed ortholog is 99%.
Bootstrap support for L0PGS4 as seed ortholog is 100%.

Group of orthologs #134. Best score 269 bits
Score difference with first non-orthologous sequence - E.cuniculi:269 P.jiroveci:269

Q8SQN2              	100.00%		L0P9J7              	100.00%
Bootstrap support for Q8SQN2 as seed ortholog is 100%.
Bootstrap support for L0P9J7 as seed ortholog is 100%.

Group of orthologs #135. Best score 269 bits
Score difference with first non-orthologous sequence - E.cuniculi:269 P.jiroveci:269

Q8SVM5              	100.00%		L0P9T2              	100.00%
Bootstrap support for Q8SVM5 as seed ortholog is 100%.
Bootstrap support for L0P9T2 as seed ortholog is 100%.

Group of orthologs #136. Best score 265 bits
Score difference with first non-orthologous sequence - E.cuniculi:131 P.jiroveci:119

Q8SS21              	100.00%		L0PCJ5              	100.00%
Bootstrap support for Q8SS21 as seed ortholog is 99%.
Bootstrap support for L0PCJ5 as seed ortholog is 99%.

Group of orthologs #137. Best score 264 bits
Score difference with first non-orthologous sequence - E.cuniculi:264 P.jiroveci:264

Q8SQN6              	100.00%		L0PA85              	100.00%
Bootstrap support for Q8SQN6 as seed ortholog is 100%.
Bootstrap support for L0PA85 as seed ortholog is 100%.

Group of orthologs #138. Best score 263 bits
Score difference with first non-orthologous sequence - E.cuniculi:263 P.jiroveci:263

Q8SR69              	100.00%		L0PDC7              	100.00%
Bootstrap support for Q8SR69 as seed ortholog is 100%.
Bootstrap support for L0PDC7 as seed ortholog is 100%.

Group of orthologs #139. Best score 262 bits
Score difference with first non-orthologous sequence - E.cuniculi:262 P.jiroveci:262

Q8SS90              	100.00%		L0PC90              	100.00%
Bootstrap support for Q8SS90 as seed ortholog is 100%.
Bootstrap support for L0PC90 as seed ortholog is 100%.

Group of orthologs #140. Best score 261 bits
Score difference with first non-orthologous sequence - E.cuniculi:261 P.jiroveci:261

Q8SVL2              	100.00%		L0PFL5              	100.00%
Bootstrap support for Q8SVL2 as seed ortholog is 100%.
Bootstrap support for L0PFL5 as seed ortholog is 100%.

Group of orthologs #141. Best score 260 bits
Score difference with first non-orthologous sequence - E.cuniculi:260 P.jiroveci:260

Q8SU52              	100.00%		L0PDQ3              	100.00%
Bootstrap support for Q8SU52 as seed ortholog is 100%.
Bootstrap support for L0PDQ3 as seed ortholog is 100%.

Group of orthologs #142. Best score 260 bits
Score difference with first non-orthologous sequence - E.cuniculi:260 P.jiroveci:260

Q8SW60              	100.00%		L0PDK6              	100.00%
Bootstrap support for Q8SW60 as seed ortholog is 100%.
Bootstrap support for L0PDK6 as seed ortholog is 100%.

Group of orthologs #143. Best score 259 bits
Score difference with first non-orthologous sequence - E.cuniculi:259 P.jiroveci:259

Q8SRV0              	100.00%		L0PG82              	100.00%
Bootstrap support for Q8SRV0 as seed ortholog is 100%.
Bootstrap support for L0PG82 as seed ortholog is 100%.

Group of orthologs #144. Best score 259 bits
Score difference with first non-orthologous sequence - E.cuniculi:259 P.jiroveci:259

Q8SU27              	100.00%		L0PGU0              	100.00%
Bootstrap support for Q8SU27 as seed ortholog is 100%.
Bootstrap support for L0PGU0 as seed ortholog is 100%.

Group of orthologs #145. Best score 258 bits
Score difference with first non-orthologous sequence - E.cuniculi:258 P.jiroveci:258

Q8SRA6              	100.00%		L0P7V0              	100.00%
Bootstrap support for Q8SRA6 as seed ortholog is 100%.
Bootstrap support for L0P7V0 as seed ortholog is 100%.

Group of orthologs #146. Best score 258 bits
Score difference with first non-orthologous sequence - E.cuniculi:258 P.jiroveci:258

Q8SSL7              	100.00%		L0P9C9              	100.00%
Bootstrap support for Q8SSL7 as seed ortholog is 100%.
Bootstrap support for L0P9C9 as seed ortholog is 100%.

Group of orthologs #147. Best score 257 bits
Score difference with first non-orthologous sequence - E.cuniculi:257 P.jiroveci:257

Q8SRI0              	100.00%		L0P8F5              	100.00%
Bootstrap support for Q8SRI0 as seed ortholog is 100%.
Bootstrap support for L0P8F5 as seed ortholog is 100%.

Group of orthologs #148. Best score 256 bits
Score difference with first non-orthologous sequence - E.cuniculi:256 P.jiroveci:256

Q8SRC6              	100.00%		L0PFM4              	100.00%
Bootstrap support for Q8SRC6 as seed ortholog is 100%.
Bootstrap support for L0PFM4 as seed ortholog is 100%.

Group of orthologs #149. Best score 255 bits
Score difference with first non-orthologous sequence - E.cuniculi:145 P.jiroveci:255

Q8SS91              	100.00%		L0PA00              	100.00%
Bootstrap support for Q8SS91 as seed ortholog is 100%.
Bootstrap support for L0PA00 as seed ortholog is 100%.

Group of orthologs #150. Best score 255 bits
Score difference with first non-orthologous sequence - E.cuniculi:255 P.jiroveci:255

Q8SQS3              	100.00%		L0PBW1              	100.00%
Bootstrap support for Q8SQS3 as seed ortholog is 100%.
Bootstrap support for L0PBW1 as seed ortholog is 100%.

Group of orthologs #151. Best score 253 bits
Score difference with first non-orthologous sequence - E.cuniculi:253 P.jiroveci:253

Q8SS65              	100.00%		L0P773              	100.00%
Bootstrap support for Q8SS65 as seed ortholog is 100%.
Bootstrap support for L0P773 as seed ortholog is 100%.

Group of orthologs #152. Best score 250 bits
Score difference with first non-orthologous sequence - E.cuniculi:250 P.jiroveci:250

Q8SR96              	100.00%		L0PAG0              	100.00%
Bootstrap support for Q8SR96 as seed ortholog is 100%.
Bootstrap support for L0PAG0 as seed ortholog is 100%.

Group of orthologs #153. Best score 250 bits
Score difference with first non-orthologous sequence - E.cuniculi:250 P.jiroveci:127

Q8SUV4              	100.00%		L0PCV1              	100.00%
Bootstrap support for Q8SUV4 as seed ortholog is 100%.
Bootstrap support for L0PCV1 as seed ortholog is 99%.

Group of orthologs #154. Best score 249 bits
Score difference with first non-orthologous sequence - E.cuniculi:249 P.jiroveci:249

Q8SRS7              	100.00%		L0P7Z6              	100.00%
Bootstrap support for Q8SRS7 as seed ortholog is 100%.
Bootstrap support for L0P7Z6 as seed ortholog is 100%.

Group of orthologs #155. Best score 245 bits
Score difference with first non-orthologous sequence - E.cuniculi:245 P.jiroveci:245

Q8SQP0              	100.00%		L0PEE3              	100.00%
Bootstrap support for Q8SQP0 as seed ortholog is 100%.
Bootstrap support for L0PEE3 as seed ortholog is 100%.

Group of orthologs #156. Best score 245 bits
Score difference with first non-orthologous sequence - E.cuniculi:245 P.jiroveci:245

Q8SUZ5              	100.00%		L0PDW0              	100.00%
Bootstrap support for Q8SUZ5 as seed ortholog is 100%.
Bootstrap support for L0PDW0 as seed ortholog is 100%.

Group of orthologs #157. Best score 244 bits
Score difference with first non-orthologous sequence - E.cuniculi:15 P.jiroveci:88

Q8SR01              	100.00%		L0P8E7              	100.00%
Bootstrap support for Q8SR01 as seed ortholog is 63%.
Alternative seed ortholog is Q8SR49 (15 bits away from this cluster)
Bootstrap support for L0P8E7 as seed ortholog is 99%.

Group of orthologs #158. Best score 242 bits
Score difference with first non-orthologous sequence - E.cuniculi:134 P.jiroveci:242

Q8SWA5              	100.00%		L0PAS3              	100.00%
Bootstrap support for Q8SWA5 as seed ortholog is 98%.
Bootstrap support for L0PAS3 as seed ortholog is 100%.

Group of orthologs #159. Best score 240 bits
Score difference with first non-orthologous sequence - E.cuniculi:240 P.jiroveci:240

Q8SSH5              	100.00%		L0PCC4              	100.00%
Bootstrap support for Q8SSH5 as seed ortholog is 100%.
Bootstrap support for L0PCC4 as seed ortholog is 100%.

Group of orthologs #160. Best score 237 bits
Score difference with first non-orthologous sequence - E.cuniculi:48 P.jiroveci:88

Q8SQM5              	100.00%		L0P7V6              	100.00%
                    	       		L0PC64              	32.03%
Bootstrap support for Q8SQM5 as seed ortholog is 90%.
Bootstrap support for L0P7V6 as seed ortholog is 99%.

Group of orthologs #161. Best score 237 bits
Score difference with first non-orthologous sequence - E.cuniculi:237 P.jiroveci:237

Q8SRQ3              	100.00%		L0PA42              	100.00%
Bootstrap support for Q8SRQ3 as seed ortholog is 100%.
Bootstrap support for L0PA42 as seed ortholog is 100%.

Group of orthologs #162. Best score 237 bits
Score difference with first non-orthologous sequence - E.cuniculi:86 P.jiroveci:54

Q8SR63              	100.00%		L0PAY5              	100.00%
Bootstrap support for Q8SR63 as seed ortholog is 98%.
Bootstrap support for L0PAY5 as seed ortholog is 91%.

Group of orthologs #163. Best score 237 bits
Score difference with first non-orthologous sequence - E.cuniculi:237 P.jiroveci:237

Q8SQV0              	100.00%		L0PGJ5              	100.00%
Bootstrap support for Q8SQV0 as seed ortholog is 100%.
Bootstrap support for L0PGJ5 as seed ortholog is 100%.

Group of orthologs #164. Best score 235 bits
Score difference with first non-orthologous sequence - E.cuniculi:235 P.jiroveci:235

Q8SS40              	100.00%		L0P9X7              	100.00%
Bootstrap support for Q8SS40 as seed ortholog is 100%.
Bootstrap support for L0P9X7 as seed ortholog is 100%.

Group of orthologs #165. Best score 235 bits
Score difference with first non-orthologous sequence - E.cuniculi:235 P.jiroveci:235

Q8SS55              	100.00%		L0PF23              	100.00%
Bootstrap support for Q8SS55 as seed ortholog is 100%.
Bootstrap support for L0PF23 as seed ortholog is 100%.

Group of orthologs #166. Best score 235 bits
Score difference with first non-orthologous sequence - E.cuniculi:235 P.jiroveci:235

Q8SS78              	100.00%		L0PFX1              	100.00%
Bootstrap support for Q8SS78 as seed ortholog is 100%.
Bootstrap support for L0PFX1 as seed ortholog is 100%.

Group of orthologs #167. Best score 232 bits
Score difference with first non-orthologous sequence - E.cuniculi:178 P.jiroveci:232

Q8SR88              	100.00%		L0PCJ2              	100.00%
Bootstrap support for Q8SR88 as seed ortholog is 100%.
Bootstrap support for L0PCJ2 as seed ortholog is 100%.

Group of orthologs #168. Best score 232 bits
Score difference with first non-orthologous sequence - E.cuniculi:232 P.jiroveci:150

Q8SSD5              	100.00%		L0PG55              	100.00%
Bootstrap support for Q8SSD5 as seed ortholog is 100%.
Bootstrap support for L0PG55 as seed ortholog is 99%.

Group of orthologs #169. Best score 231 bits
Score difference with first non-orthologous sequence - E.cuniculi:231 P.jiroveci:112

Q8SQW5              	100.00%		L0PET5              	100.00%
Bootstrap support for Q8SQW5 as seed ortholog is 100%.
Bootstrap support for L0PET5 as seed ortholog is 98%.

Group of orthologs #170. Best score 230 bits
Score difference with first non-orthologous sequence - E.cuniculi:104 P.jiroveci:230

Q8SW31              	100.00%		L0PCJ7              	100.00%
Bootstrap support for Q8SW31 as seed ortholog is 99%.
Bootstrap support for L0PCJ7 as seed ortholog is 100%.

Group of orthologs #171. Best score 228 bits
Score difference with first non-orthologous sequence - E.cuniculi:228 P.jiroveci:228

Q8SSH3              	100.00%		L0P8N1              	100.00%
Bootstrap support for Q8SSH3 as seed ortholog is 100%.
Bootstrap support for L0P8N1 as seed ortholog is 100%.

Group of orthologs #172. Best score 227 bits
Score difference with first non-orthologous sequence - E.cuniculi:227 P.jiroveci:227

Q8SR30              	100.00%		L0P802              	100.00%
Bootstrap support for Q8SR30 as seed ortholog is 100%.
Bootstrap support for L0P802 as seed ortholog is 100%.

Group of orthologs #173. Best score 227 bits
Score difference with first non-orthologous sequence - E.cuniculi:71 P.jiroveci:33

Q8SQM0              	100.00%		L0PE19              	100.00%
Bootstrap support for Q8SQM0 as seed ortholog is 98%.
Bootstrap support for L0PE19 as seed ortholog is 84%.

Group of orthologs #174. Best score 225 bits
Score difference with first non-orthologous sequence - E.cuniculi:225 P.jiroveci:225

Q8SQL6              	100.00%		L0P8Z3              	100.00%
Bootstrap support for Q8SQL6 as seed ortholog is 100%.
Bootstrap support for L0P8Z3 as seed ortholog is 100%.

Group of orthologs #175. Best score 225 bits
Score difference with first non-orthologous sequence - E.cuniculi:225 P.jiroveci:225

Q8SRB1              	100.00%		L0P9R9              	100.00%
Bootstrap support for Q8SRB1 as seed ortholog is 100%.
Bootstrap support for L0P9R9 as seed ortholog is 100%.

Group of orthologs #176. Best score 225 bits
Score difference with first non-orthologous sequence - E.cuniculi:225 P.jiroveci:225

Q8STW7              	100.00%		L0P961              	100.00%
Bootstrap support for Q8STW7 as seed ortholog is 100%.
Bootstrap support for L0P961 as seed ortholog is 100%.

Group of orthologs #177. Best score 225 bits
Score difference with first non-orthologous sequence - E.cuniculi:225 P.jiroveci:225

Q8SRZ6              	100.00%		L0PDT2              	100.00%
Bootstrap support for Q8SRZ6 as seed ortholog is 100%.
Bootstrap support for L0PDT2 as seed ortholog is 100%.

Group of orthologs #178. Best score 222 bits
Score difference with first non-orthologous sequence - E.cuniculi:222 P.jiroveci:222

Q8STM0              	100.00%		L0PBP7              	100.00%
Bootstrap support for Q8STM0 as seed ortholog is 100%.
Bootstrap support for L0PBP7 as seed ortholog is 100%.

Group of orthologs #179. Best score 222 bits
Score difference with first non-orthologous sequence - E.cuniculi:172 P.jiroveci:222

Q8SSD6              	100.00%		L0PCY0              	100.00%
Bootstrap support for Q8SSD6 as seed ortholog is 99%.
Bootstrap support for L0PCY0 as seed ortholog is 100%.

Group of orthologs #180. Best score 220 bits
Score difference with first non-orthologous sequence - E.cuniculi:220 P.jiroveci:3

Q8SRV5              	100.00%		L0PDF8              	100.00%
Bootstrap support for Q8SRV5 as seed ortholog is 100%.
Bootstrap support for L0PDF8 as seed ortholog is 55%.
Alternative seed ortholog is L0P6U6 (3 bits away from this cluster)

Group of orthologs #181. Best score 217 bits
Score difference with first non-orthologous sequence - E.cuniculi:217 P.jiroveci:51

Q8SQX7              	100.00%		L0P6Q8              	100.00%
                    	       		L0PD82              	44.53%
Bootstrap support for Q8SQX7 as seed ortholog is 100%.
Bootstrap support for L0P6Q8 as seed ortholog is 92%.

Group of orthologs #182. Best score 217 bits
Score difference with first non-orthologous sequence - E.cuniculi:217 P.jiroveci:217

Q8SUE9              	100.00%		L0PBK8              	100.00%
Bootstrap support for Q8SUE9 as seed ortholog is 100%.
Bootstrap support for L0PBK8 as seed ortholog is 100%.

Group of orthologs #183. Best score 215 bits
Score difference with first non-orthologous sequence - E.cuniculi:215 P.jiroveci:139

Q8SUA0              	100.00%		L0P6T8              	100.00%
Bootstrap support for Q8SUA0 as seed ortholog is 100%.
Bootstrap support for L0P6T8 as seed ortholog is 99%.

Group of orthologs #184. Best score 215 bits
Score difference with first non-orthologous sequence - E.cuniculi:215 P.jiroveci:215

Q8SVA6              	100.00%		L0PA09              	100.00%
Bootstrap support for Q8SVA6 as seed ortholog is 100%.
Bootstrap support for L0PA09 as seed ortholog is 100%.

Group of orthologs #185. Best score 215 bits
Score difference with first non-orthologous sequence - E.cuniculi:215 P.jiroveci:215

Q8SRP3              	100.00%		L0PFC0              	100.00%
Bootstrap support for Q8SRP3 as seed ortholog is 100%.
Bootstrap support for L0PFC0 as seed ortholog is 100%.

Group of orthologs #186. Best score 214 bits
Score difference with first non-orthologous sequence - E.cuniculi:214 P.jiroveci:214

Q8SUQ6              	100.00%		L0PA72              	100.00%
Bootstrap support for Q8SUQ6 as seed ortholog is 100%.
Bootstrap support for L0PA72 as seed ortholog is 100%.

Group of orthologs #187. Best score 214 bits
Score difference with first non-orthologous sequence - E.cuniculi:214 P.jiroveci:214

Q8SSL2              	100.00%		L0PET7              	100.00%
Bootstrap support for Q8SSL2 as seed ortholog is 100%.
Bootstrap support for L0PET7 as seed ortholog is 100%.

Group of orthologs #188. Best score 212 bits
Score difference with first non-orthologous sequence - E.cuniculi:212 P.jiroveci:212

Q8SSH4              	100.00%		L0P7P7              	100.00%
Bootstrap support for Q8SSH4 as seed ortholog is 100%.
Bootstrap support for L0P7P7 as seed ortholog is 100%.

Group of orthologs #189. Best score 212 bits
Score difference with first non-orthologous sequence - E.cuniculi:212 P.jiroveci:212

Q8SVW2              	100.00%		L0PCB2              	100.00%
Bootstrap support for Q8SVW2 as seed ortholog is 100%.
Bootstrap support for L0PCB2 as seed ortholog is 100%.

Group of orthologs #190. Best score 211 bits
Score difference with first non-orthologous sequence - E.cuniculi:211 P.jiroveci:211

Q8SSG9              	100.00%		L0PAM2              	100.00%
Bootstrap support for Q8SSG9 as seed ortholog is 100%.
Bootstrap support for L0PAM2 as seed ortholog is 100%.

Group of orthologs #191. Best score 211 bits
Score difference with first non-orthologous sequence - E.cuniculi:211 P.jiroveci:139

Q8SV20              	100.00%		L0PAN7              	100.00%
Bootstrap support for Q8SV20 as seed ortholog is 100%.
Bootstrap support for L0PAN7 as seed ortholog is 99%.

Group of orthologs #192. Best score 210 bits
Score difference with first non-orthologous sequence - E.cuniculi:210 P.jiroveci:210

Q8SQZ3              	100.00%		L0PBM4              	100.00%
Bootstrap support for Q8SQZ3 as seed ortholog is 100%.
Bootstrap support for L0PBM4 as seed ortholog is 100%.

Group of orthologs #193. Best score 208 bits
Score difference with first non-orthologous sequence - E.cuniculi:141 P.jiroveci:105

Q8SR85              	100.00%		L0PDC4              	100.00%
Q8SR83              	99.80%		L0PBK4              	5.37%
Bootstrap support for Q8SR85 as seed ortholog is 99%.
Bootstrap support for L0PDC4 as seed ortholog is 99%.

Group of orthologs #194. Best score 207 bits
Score difference with first non-orthologous sequence - E.cuniculi:207 P.jiroveci:207

Q8SQK2              	100.00%		L0PEA0              	100.00%
Bootstrap support for Q8SQK2 as seed ortholog is 100%.
Bootstrap support for L0PEA0 as seed ortholog is 100%.

Group of orthologs #195. Best score 206 bits
Score difference with first non-orthologous sequence - E.cuniculi:70 P.jiroveci:206

Q8SQV1              	100.00%		L0P9A8              	100.00%
                    	       		L0PHB9              	100.00%
                    	       		L0PBI4              	8.39%
Bootstrap support for Q8SQV1 as seed ortholog is 96%.
Bootstrap support for L0P9A8 as seed ortholog is 100%.
Bootstrap support for L0PHB9 as seed ortholog is 100%.

Group of orthologs #196. Best score 206 bits
Score difference with first non-orthologous sequence - E.cuniculi:121 P.jiroveci:154

Q8SQS4              	100.00%		L0PBM0              	100.00%
Bootstrap support for Q8SQS4 as seed ortholog is 99%.
Bootstrap support for L0PBM0 as seed ortholog is 99%.

Group of orthologs #197. Best score 203 bits
Score difference with first non-orthologous sequence - E.cuniculi:203 P.jiroveci:203

Q8SR29              	100.00%		L0P705              	100.00%
Bootstrap support for Q8SR29 as seed ortholog is 100%.
Bootstrap support for L0P705 as seed ortholog is 100%.

Group of orthologs #198. Best score 203 bits
Score difference with first non-orthologous sequence - E.cuniculi:203 P.jiroveci:150

Q8SS32              	100.00%		L0PD68              	100.00%
Bootstrap support for Q8SS32 as seed ortholog is 100%.
Bootstrap support for L0PD68 as seed ortholog is 100%.

Group of orthologs #199. Best score 202 bits
Score difference with first non-orthologous sequence - E.cuniculi:202 P.jiroveci:202

Q8SS13              	100.00%		L0P951              	100.00%
Bootstrap support for Q8SS13 as seed ortholog is 100%.
Bootstrap support for L0P951 as seed ortholog is 100%.

Group of orthologs #200. Best score 202 bits
Score difference with first non-orthologous sequence - E.cuniculi:202 P.jiroveci:202

Q8SSF4              	100.00%		L0PEC0              	100.00%
Bootstrap support for Q8SSF4 as seed ortholog is 100%.
Bootstrap support for L0PEC0 as seed ortholog is 100%.

Group of orthologs #201. Best score 201 bits
Score difference with first non-orthologous sequence - E.cuniculi:201 P.jiroveci:201

Q8SR61              	100.00%		L0PC82              	100.00%
Bootstrap support for Q8SR61 as seed ortholog is 100%.
Bootstrap support for L0PC82 as seed ortholog is 100%.

Group of orthologs #202. Best score 201 bits
Score difference with first non-orthologous sequence - E.cuniculi:201 P.jiroveci:201

Q8SQJ3              	100.00%		L0PD75              	100.00%
Bootstrap support for Q8SQJ3 as seed ortholog is 100%.
Bootstrap support for L0PD75 as seed ortholog is 100%.

Group of orthologs #203. Best score 200 bits
Score difference with first non-orthologous sequence - E.cuniculi:200 P.jiroveci:200

Q8STM6              	100.00%		L0PAT1              	100.00%
Bootstrap support for Q8STM6 as seed ortholog is 100%.
Bootstrap support for L0PAT1 as seed ortholog is 100%.

Group of orthologs #204. Best score 199 bits
Score difference with first non-orthologous sequence - E.cuniculi:122 P.jiroveci:102

Q8SR43              	100.00%		L0P7P4              	100.00%
Bootstrap support for Q8SR43 as seed ortholog is 99%.
Bootstrap support for L0P7P4 as seed ortholog is 99%.

Group of orthologs #205. Best score 197 bits
Score difference with first non-orthologous sequence - E.cuniculi:197 P.jiroveci:197

Q8SRJ9              	100.00%		L0P870              	100.00%
Bootstrap support for Q8SRJ9 as seed ortholog is 100%.
Bootstrap support for L0P870 as seed ortholog is 100%.

Group of orthologs #206. Best score 197 bits
Score difference with first non-orthologous sequence - E.cuniculi:197 P.jiroveci:197

Q8SVI7              	100.00%		L0PD18              	100.00%
Bootstrap support for Q8SVI7 as seed ortholog is 100%.
Bootstrap support for L0PD18 as seed ortholog is 100%.

Group of orthologs #207. Best score 195 bits
Score difference with first non-orthologous sequence - E.cuniculi:195 P.jiroveci:22

Q8SSB0              	100.00%		L0PC99              	100.00%
Bootstrap support for Q8SSB0 as seed ortholog is 100%.
Bootstrap support for L0PC99 as seed ortholog is 60%.
Alternative seed ortholog is L0PIP5 (22 bits away from this cluster)

Group of orthologs #208. Best score 195 bits
Score difference with first non-orthologous sequence - E.cuniculi:25 P.jiroveci:195

Q8SSJ9              	100.00%		L0PGL8              	100.00%
Bootstrap support for Q8SSJ9 as seed ortholog is 99%.
Bootstrap support for L0PGL8 as seed ortholog is 100%.

Group of orthologs #209. Best score 193 bits
Score difference with first non-orthologous sequence - E.cuniculi:193 P.jiroveci:193

Q8SW12              	100.00%		L0PDZ2              	100.00%
Bootstrap support for Q8SW12 as seed ortholog is 100%.
Bootstrap support for L0PDZ2 as seed ortholog is 100%.

Group of orthologs #210. Best score 193 bits
Score difference with first non-orthologous sequence - E.cuniculi:193 P.jiroveci:193

Q8SS97              	100.00%		L0PI36              	100.00%
Bootstrap support for Q8SS97 as seed ortholog is 100%.
Bootstrap support for L0PI36 as seed ortholog is 100%.

Group of orthologs #211. Best score 191 bits
Score difference with first non-orthologous sequence - E.cuniculi:191 P.jiroveci:191

Q8SR11              	100.00%		L0P839              	100.00%
Bootstrap support for Q8SR11 as seed ortholog is 100%.
Bootstrap support for L0P839 as seed ortholog is 100%.

Group of orthologs #212. Best score 191 bits
Score difference with first non-orthologous sequence - E.cuniculi:191 P.jiroveci:191

Q8SSM6              	100.00%		L0PID0              	100.00%
Bootstrap support for Q8SSM6 as seed ortholog is 100%.
Bootstrap support for L0PID0 as seed ortholog is 100%.

Group of orthologs #213. Best score 190 bits
Score difference with first non-orthologous sequence - E.cuniculi:190 P.jiroveci:190

Q8SRY7              	100.00%		L0P8X1              	100.00%
Bootstrap support for Q8SRY7 as seed ortholog is 100%.
Bootstrap support for L0P8X1 as seed ortholog is 100%.

Group of orthologs #214. Best score 189 bits
Score difference with first non-orthologous sequence - E.cuniculi:189 P.jiroveci:189

Q8SRB8              	100.00%		L0P8J0              	100.00%
Bootstrap support for Q8SRB8 as seed ortholog is 100%.
Bootstrap support for L0P8J0 as seed ortholog is 100%.

Group of orthologs #215. Best score 188 bits
Score difference with first non-orthologous sequence - E.cuniculi:188 P.jiroveci:188

Q8SQT9              	100.00%		L0PG22              	100.00%
                    	       		L0PB04              	78.25%
Bootstrap support for Q8SQT9 as seed ortholog is 100%.
Bootstrap support for L0PG22 as seed ortholog is 100%.

Group of orthologs #216. Best score 186 bits
Score difference with first non-orthologous sequence - E.cuniculi:130 P.jiroveci:186

Q8SQN7              	100.00%		L0PET2              	100.00%
                    	       		L0PAE5              	87.57%
Bootstrap support for Q8SQN7 as seed ortholog is 100%.
Bootstrap support for L0PET2 as seed ortholog is 100%.

Group of orthologs #217. Best score 186 bits
Score difference with first non-orthologous sequence - E.cuniculi:186 P.jiroveci:186

Q8STP2              	100.00%		L0PCK3              	100.00%
Bootstrap support for Q8STP2 as seed ortholog is 100%.
Bootstrap support for L0PCK3 as seed ortholog is 100%.

Group of orthologs #218. Best score 185 bits
Score difference with first non-orthologous sequence - E.cuniculi:89 P.jiroveci:185

Q8SRR5              	100.00%		L0PEQ4              	100.00%
Bootstrap support for Q8SRR5 as seed ortholog is 99%.
Bootstrap support for L0PEQ4 as seed ortholog is 100%.

Group of orthologs #219. Best score 183 bits
Score difference with first non-orthologous sequence - E.cuniculi:183 P.jiroveci:183

Q8SRF2              	100.00%		L0PBC8              	100.00%
Bootstrap support for Q8SRF2 as seed ortholog is 100%.
Bootstrap support for L0PBC8 as seed ortholog is 100%.

Group of orthologs #220. Best score 183 bits
Score difference with first non-orthologous sequence - E.cuniculi:183 P.jiroveci:183

Q8SR60              	100.00%		L0PDH2              	100.00%
Bootstrap support for Q8SR60 as seed ortholog is 100%.
Bootstrap support for L0PDH2 as seed ortholog is 100%.

Group of orthologs #221. Best score 183 bits
Score difference with first non-orthologous sequence - E.cuniculi:183 P.jiroveci:183

Q8SS72              	100.00%		L0PFI8              	100.00%
Bootstrap support for Q8SS72 as seed ortholog is 100%.
Bootstrap support for L0PFI8 as seed ortholog is 100%.

Group of orthologs #222. Best score 182 bits
Score difference with first non-orthologous sequence - E.cuniculi:182 P.jiroveci:182

Q8SW94              	100.00%		L0PBQ9              	100.00%
Bootstrap support for Q8SW94 as seed ortholog is 100%.
Bootstrap support for L0PBQ9 as seed ortholog is 100%.

Group of orthologs #223. Best score 181 bits
Score difference with first non-orthologous sequence - E.cuniculi:181 P.jiroveci:181

Q8SS47              	100.00%		L0PEV9              	100.00%
Bootstrap support for Q8SS47 as seed ortholog is 100%.
Bootstrap support for L0PEV9 as seed ortholog is 100%.

Group of orthologs #224. Best score 181 bits
Score difference with first non-orthologous sequence - E.cuniculi:181 P.jiroveci:181

Q95ZE3              	100.00%		L0PB54              	100.00%
Bootstrap support for Q95ZE3 as seed ortholog is 100%.
Bootstrap support for L0PB54 as seed ortholog is 100%.

Group of orthologs #225. Best score 181 bits
Score difference with first non-orthologous sequence - E.cuniculi:181 P.jiroveci:181

Q8SRR7              	100.00%		L0PIV4              	100.00%
Bootstrap support for Q8SRR7 as seed ortholog is 100%.
Bootstrap support for L0PIV4 as seed ortholog is 100%.

Group of orthologs #226. Best score 180 bits
Score difference with first non-orthologous sequence - E.cuniculi:180 P.jiroveci:82

Q8SRK0              	100.00%		L0PGJ9              	100.00%
                    	       		L0PDD1              	9.25%
Bootstrap support for Q8SRK0 as seed ortholog is 100%.
Bootstrap support for L0PGJ9 as seed ortholog is 97%.

Group of orthologs #227. Best score 180 bits
Score difference with first non-orthologous sequence - E.cuniculi:180 P.jiroveci:180

Q8SSC6              	100.00%		L0P8M6              	100.00%
Bootstrap support for Q8SSC6 as seed ortholog is 100%.
Bootstrap support for L0P8M6 as seed ortholog is 100%.

Group of orthologs #228. Best score 180 bits
Score difference with first non-orthologous sequence - E.cuniculi:180 P.jiroveci:180

Q8SRD5              	100.00%		L0PED5              	100.00%
Bootstrap support for Q8SRD5 as seed ortholog is 100%.
Bootstrap support for L0PED5 as seed ortholog is 100%.

Group of orthologs #229. Best score 178 bits
Score difference with first non-orthologous sequence - E.cuniculi:178 P.jiroveci:68

Q8SRN8              	100.00%		L0PH46              	100.00%
                    	       		L0P6W8              	82.90%
Bootstrap support for Q8SRN8 as seed ortholog is 100%.
Bootstrap support for L0PH46 as seed ortholog is 90%.

Group of orthologs #230. Best score 177 bits
Score difference with first non-orthologous sequence - E.cuniculi:177 P.jiroveci:177

Q8SRW3              	100.00%		L0PAJ2              	100.00%
Bootstrap support for Q8SRW3 as seed ortholog is 100%.
Bootstrap support for L0PAJ2 as seed ortholog is 100%.

Group of orthologs #231. Best score 175 bits
Score difference with first non-orthologous sequence - E.cuniculi:175 P.jiroveci:175

Q8SR38              	100.00%		L0PGR0              	100.00%
Q8SR39              	100.00%		
Bootstrap support for Q8SR38 as seed ortholog is 100%.
Bootstrap support for Q8SR39 as seed ortholog is 100%.
Bootstrap support for L0PGR0 as seed ortholog is 100%.

Group of orthologs #232. Best score 175 bits
Score difference with first non-orthologous sequence - E.cuniculi:175 P.jiroveci:175

Q8SRN9              	100.00%		L0P9P0              	100.00%
Bootstrap support for Q8SRN9 as seed ortholog is 100%.
Bootstrap support for L0P9P0 as seed ortholog is 100%.

Group of orthologs #233. Best score 175 bits
Score difference with first non-orthologous sequence - E.cuniculi:175 P.jiroveci:175

Q8SW28              	100.00%		L0P9S5              	100.00%
Bootstrap support for Q8SW28 as seed ortholog is 100%.
Bootstrap support for L0P9S5 as seed ortholog is 100%.

Group of orthologs #234. Best score 175 bits
Score difference with first non-orthologous sequence - E.cuniculi:175 P.jiroveci:175

Q8SU53              	100.00%		L0PCU0              	100.00%
Bootstrap support for Q8SU53 as seed ortholog is 100%.
Bootstrap support for L0PCU0 as seed ortholog is 100%.

Group of orthologs #235. Best score 175 bits
Score difference with first non-orthologous sequence - E.cuniculi:175 P.jiroveci:175

Q8SS00              	100.00%		L0PG96              	100.00%
Bootstrap support for Q8SS00 as seed ortholog is 100%.
Bootstrap support for L0PG96 as seed ortholog is 100%.

Group of orthologs #236. Best score 173 bits
Score difference with first non-orthologous sequence - E.cuniculi:36 P.jiroveci:95

Q8STS8              	100.00%		L0PAI9              	100.00%
                    	       		L0PB70              	6.38%
                    	       		L0PAX8              	5.46%
                    	       		L0PCM1              	5.10%
Bootstrap support for Q8STS8 as seed ortholog is 83%.
Bootstrap support for L0PAI9 as seed ortholog is 98%.

Group of orthologs #237. Best score 172 bits
Score difference with first non-orthologous sequence - E.cuniculi:172 P.jiroveci:124

Q8SV73              	100.00%		L0PEY9              	100.00%
Bootstrap support for Q8SV73 as seed ortholog is 100%.
Bootstrap support for L0PEY9 as seed ortholog is 99%.

Group of orthologs #238. Best score 171 bits
Score difference with first non-orthologous sequence - E.cuniculi:171 P.jiroveci:171

Q8SQU2              	100.00%		L0P7H2              	100.00%
Bootstrap support for Q8SQU2 as seed ortholog is 100%.
Bootstrap support for L0P7H2 as seed ortholog is 100%.

Group of orthologs #239. Best score 171 bits
Score difference with first non-orthologous sequence - E.cuniculi:59 P.jiroveci:37

Q8SS54              	100.00%		L0PHH9              	100.00%
Bootstrap support for Q8SS54 as seed ortholog is 99%.
Bootstrap support for L0PHH9 as seed ortholog is 94%.

Group of orthologs #240. Best score 169 bits
Score difference with first non-orthologous sequence - E.cuniculi:169 P.jiroveci:169

Q8SSM2              	100.00%		L0PDW5              	100.00%
Bootstrap support for Q8SSM2 as seed ortholog is 100%.
Bootstrap support for L0PDW5 as seed ortholog is 100%.

Group of orthologs #241. Best score 168 bits
Score difference with first non-orthologous sequence - E.cuniculi:168 P.jiroveci:102

Q8SR77              	100.00%		L0PAL2              	100.00%
Bootstrap support for Q8SR77 as seed ortholog is 100%.
Bootstrap support for L0PAL2 as seed ortholog is 99%.

Group of orthologs #242. Best score 168 bits
Score difference with first non-orthologous sequence - E.cuniculi:64 P.jiroveci:67

Q8SRK8              	100.00%		L0PB67              	100.00%
Bootstrap support for Q8SRK8 as seed ortholog is 91%.
Bootstrap support for L0PB67 as seed ortholog is 92%.

Group of orthologs #243. Best score 166 bits
Score difference with first non-orthologous sequence - E.cuniculi:166 P.jiroveci:166

Q8SQN1              	100.00%		L0PDB7              	100.00%
Bootstrap support for Q8SQN1 as seed ortholog is 100%.
Bootstrap support for L0PDB7 as seed ortholog is 100%.

Group of orthologs #244. Best score 165 bits
Score difference with first non-orthologous sequence - E.cuniculi:165 P.jiroveci:165

Q8SRA3              	100.00%		L0PDT8              	100.00%
                    	       		L0P9R2              	92.01%
Bootstrap support for Q8SRA3 as seed ortholog is 100%.
Bootstrap support for L0PDT8 as seed ortholog is 100%.

Group of orthologs #245. Best score 165 bits
Score difference with first non-orthologous sequence - E.cuniculi:165 P.jiroveci:165

Q8SRJ7              	100.00%		L0PHG7              	100.00%
Bootstrap support for Q8SRJ7 as seed ortholog is 100%.
Bootstrap support for L0PHG7 as seed ortholog is 100%.

Group of orthologs #246. Best score 161 bits
Score difference with first non-orthologous sequence - E.cuniculi:161 P.jiroveci:96

Q8SS12              	100.00%		L0P9Z5              	100.00%
Bootstrap support for Q8SS12 as seed ortholog is 100%.
Bootstrap support for L0P9Z5 as seed ortholog is 98%.

Group of orthologs #247. Best score 161 bits
Score difference with first non-orthologous sequence - E.cuniculi:161 P.jiroveci:161

Q8SR84              	100.00%		L0PBZ6              	100.00%
Bootstrap support for Q8SR84 as seed ortholog is 100%.
Bootstrap support for L0PBZ6 as seed ortholog is 100%.

Group of orthologs #248. Best score 161 bits
Score difference with first non-orthologous sequence - E.cuniculi:161 P.jiroveci:96

Q8SS61              	100.00%		L0PDL9              	100.00%
Bootstrap support for Q8SS61 as seed ortholog is 100%.
Bootstrap support for L0PDL9 as seed ortholog is 99%.

Group of orthologs #249. Best score 160 bits
Score difference with first non-orthologous sequence - E.cuniculi:65 P.jiroveci:38

Q8SR17              	100.00%		L0P7B1              	100.00%
Bootstrap support for Q8SR17 as seed ortholog is 99%.
Bootstrap support for L0P7B1 as seed ortholog is 94%.

Group of orthologs #250. Best score 159 bits
Score difference with first non-orthologous sequence - E.cuniculi:159 P.jiroveci:159

Q8SQT2              	100.00%		L0P9I6              	100.00%
Bootstrap support for Q8SQT2 as seed ortholog is 100%.
Bootstrap support for L0P9I6 as seed ortholog is 100%.

Group of orthologs #251. Best score 158 bits
Score difference with first non-orthologous sequence - E.cuniculi:64 P.jiroveci:87

Q8SQM6              	100.00%		L0P9S9              	100.00%
Q8SRY6              	12.33%		L0PDT3              	42.13%
Bootstrap support for Q8SQM6 as seed ortholog is 93%.
Bootstrap support for L0P9S9 as seed ortholog is 97%.

Group of orthologs #252. Best score 158 bits
Score difference with first non-orthologous sequence - E.cuniculi:45 P.jiroveci:158

Q8SS87              	100.00%		L0P9K4              	100.00%
                    	       		L0PEZ0              	5.94%
Bootstrap support for Q8SS87 as seed ortholog is 83%.
Bootstrap support for L0P9K4 as seed ortholog is 100%.

Group of orthologs #253. Best score 157 bits
Score difference with first non-orthologous sequence - E.cuniculi:157 P.jiroveci:157

Q8SR65              	100.00%		L0PHL1              	100.00%
Bootstrap support for Q8SR65 as seed ortholog is 100%.
Bootstrap support for L0PHL1 as seed ortholog is 100%.

Group of orthologs #254. Best score 157 bits
Score difference with first non-orthologous sequence - E.cuniculi:157 P.jiroveci:157

Q8SVD6              	100.00%		L0PGL6              	100.00%
Bootstrap support for Q8SVD6 as seed ortholog is 100%.
Bootstrap support for L0PGL6 as seed ortholog is 100%.

Group of orthologs #255. Best score 156 bits
Score difference with first non-orthologous sequence - E.cuniculi:156 P.jiroveci:156

Q8SQU3              	100.00%		L0P9W2              	100.00%
Bootstrap support for Q8SQU3 as seed ortholog is 100%.
Bootstrap support for L0P9W2 as seed ortholog is 100%.

Group of orthologs #256. Best score 156 bits
Score difference with first non-orthologous sequence - E.cuniculi:156 P.jiroveci:156

Q8SR99              	100.00%		L0PBI2              	100.00%
Bootstrap support for Q8SR99 as seed ortholog is 100%.
Bootstrap support for L0PBI2 as seed ortholog is 100%.

Group of orthologs #257. Best score 156 bits
Score difference with first non-orthologous sequence - E.cuniculi:156 P.jiroveci:156

Q8SRZ4              	100.00%		L0PBP4              	100.00%
Bootstrap support for Q8SRZ4 as seed ortholog is 100%.
Bootstrap support for L0PBP4 as seed ortholog is 100%.

Group of orthologs #258. Best score 155 bits
Score difference with first non-orthologous sequence - E.cuniculi:155 P.jiroveci:155

Q8SSM4              	100.00%		L0PGJ6              	100.00%
Bootstrap support for Q8SSM4 as seed ortholog is 100%.
Bootstrap support for L0PGJ6 as seed ortholog is 100%.

Group of orthologs #259. Best score 154 bits
Score difference with first non-orthologous sequence - E.cuniculi:154 P.jiroveci:154

Q8SV76              	100.00%		L0P9G9              	100.00%
Bootstrap support for Q8SV76 as seed ortholog is 100%.
Bootstrap support for L0P9G9 as seed ortholog is 100%.

Group of orthologs #260. Best score 154 bits
Score difference with first non-orthologous sequence - E.cuniculi:154 P.jiroveci:154

Q8SR21              	100.00%		L0PDI6              	100.00%
Bootstrap support for Q8SR21 as seed ortholog is 100%.
Bootstrap support for L0PDI6 as seed ortholog is 100%.

Group of orthologs #261. Best score 154 bits
Score difference with first non-orthologous sequence - E.cuniculi:154 P.jiroveci:154

Q8SW70              	100.00%		L0PFQ3              	100.00%
Bootstrap support for Q8SW70 as seed ortholog is 100%.
Bootstrap support for L0PFQ3 as seed ortholog is 100%.

Group of orthologs #262. Best score 153 bits
Score difference with first non-orthologous sequence - E.cuniculi:153 P.jiroveci:153

Q8SRM5              	100.00%		L0PGD7              	100.00%
                    	       		L0PGQ0              	72.70%
Bootstrap support for Q8SRM5 as seed ortholog is 100%.
Bootstrap support for L0PGD7 as seed ortholog is 100%.

Group of orthologs #263. Best score 153 bits
Score difference with first non-orthologous sequence - E.cuniculi:153 P.jiroveci:153

Q8SRJ1              	100.00%		L0PAF9              	100.00%
Bootstrap support for Q8SRJ1 as seed ortholog is 100%.
Bootstrap support for L0PAF9 as seed ortholog is 100%.

Group of orthologs #264. Best score 153 bits
Score difference with first non-orthologous sequence - E.cuniculi:153 P.jiroveci:153

Q8SU51              	100.00%		L0PH55              	100.00%
Bootstrap support for Q8SU51 as seed ortholog is 100%.
Bootstrap support for L0PH55 as seed ortholog is 100%.

Group of orthologs #265. Best score 152 bits
Score difference with first non-orthologous sequence - E.cuniculi:152 P.jiroveci:152

Q8STQ0              	100.00%		L0PBN2              	100.00%
Bootstrap support for Q8STQ0 as seed ortholog is 100%.
Bootstrap support for L0PBN2 as seed ortholog is 100%.

Group of orthologs #266. Best score 151 bits
Score difference with first non-orthologous sequence - E.cuniculi:63 P.jiroveci:42

Q8SQZ4              	100.00%		L0PAL3              	100.00%
Bootstrap support for Q8SQZ4 as seed ortholog is 95%.
Bootstrap support for L0PAL3 as seed ortholog is 84%.

Group of orthologs #267. Best score 151 bits
Score difference with first non-orthologous sequence - E.cuniculi:151 P.jiroveci:151

Q8SR66              	100.00%		L0PBD4              	100.00%
Bootstrap support for Q8SR66 as seed ortholog is 100%.
Bootstrap support for L0PBD4 as seed ortholog is 100%.

Group of orthologs #268. Best score 149 bits
Score difference with first non-orthologous sequence - E.cuniculi:149 P.jiroveci:149

Q8SWA2              	100.00%		L0P7V8              	100.00%
Bootstrap support for Q8SWA2 as seed ortholog is 100%.
Bootstrap support for L0P7V8 as seed ortholog is 100%.

Group of orthologs #269. Best score 148 bits
Score difference with first non-orthologous sequence - E.cuniculi:148 P.jiroveci:148

Q8SRG7              	100.00%		L0PAP1              	100.00%
Bootstrap support for Q8SRG7 as seed ortholog is 100%.
Bootstrap support for L0PAP1 as seed ortholog is 100%.

Group of orthologs #270. Best score 148 bits
Score difference with first non-orthologous sequence - E.cuniculi:83 P.jiroveci:69

Q8SRU3              	100.00%		L0PFS8              	100.00%
Bootstrap support for Q8SRU3 as seed ortholog is 99%.
Bootstrap support for L0PFS8 as seed ortholog is 96%.

Group of orthologs #271. Best score 148 bits
Score difference with first non-orthologous sequence - E.cuniculi:148 P.jiroveci:148

Q8SV71              	100.00%		L0PGD6              	100.00%
Bootstrap support for Q8SV71 as seed ortholog is 100%.
Bootstrap support for L0PGD6 as seed ortholog is 100%.

Group of orthologs #272. Best score 147 bits
Score difference with first non-orthologous sequence - E.cuniculi:11 P.jiroveci:43

Q8SR36              	100.00%		L0P876              	100.00%
Bootstrap support for Q8SR36 as seed ortholog is 65%.
Alternative seed ortholog is Q8SQR1 (11 bits away from this cluster)
Bootstrap support for L0P876 as seed ortholog is 93%.

Group of orthologs #273. Best score 147 bits
Score difference with first non-orthologous sequence - E.cuniculi:93 P.jiroveci:147

Q8SSI0              	100.00%		L0PB84              	100.00%
Bootstrap support for Q8SSI0 as seed ortholog is 99%.
Bootstrap support for L0PB84 as seed ortholog is 100%.

Group of orthologs #274. Best score 147 bits
Score difference with first non-orthologous sequence - E.cuniculi:61 P.jiroveci:48

Q8SV24              	100.00%		L0PB10              	100.00%
Bootstrap support for Q8SV24 as seed ortholog is 96%.
Bootstrap support for L0PB10 as seed ortholog is 92%.

Group of orthologs #275. Best score 146 bits
Score difference with first non-orthologous sequence - E.cuniculi:146 P.jiroveci:146

Q8SRB9              	100.00%		L0PCG4              	100.00%
Bootstrap support for Q8SRB9 as seed ortholog is 100%.
Bootstrap support for L0PCG4 as seed ortholog is 100%.

Group of orthologs #276. Best score 146 bits
Score difference with first non-orthologous sequence - E.cuniculi:146 P.jiroveci:146

Q8SS41              	100.00%		L0PEW5              	100.00%
Bootstrap support for Q8SS41 as seed ortholog is 100%.
Bootstrap support for L0PEW5 as seed ortholog is 100%.

Group of orthologs #277. Best score 146 bits
Score difference with first non-orthologous sequence - E.cuniculi:14 P.jiroveci:13

Q8SRC8              	100.00%		L0PGP6              	100.00%
Bootstrap support for Q8SRC8 as seed ortholog is 70%.
Alternative seed ortholog is Q8SS52 (14 bits away from this cluster)
Bootstrap support for L0PGP6 as seed ortholog is 69%.
Alternative seed ortholog is L0PCC3 (13 bits away from this cluster)

Group of orthologs #278. Best score 146 bits
Score difference with first non-orthologous sequence - E.cuniculi:146 P.jiroveci:99

Q8SRM6              	100.00%		L0PHK8              	100.00%
Bootstrap support for Q8SRM6 as seed ortholog is 100%.
Bootstrap support for L0PHK8 as seed ortholog is 99%.

Group of orthologs #279. Best score 146 bits
Score difference with first non-orthologous sequence - E.cuniculi:146 P.jiroveci:146

Q8SSL8              	100.00%		L0PGC4              	100.00%
Bootstrap support for Q8SSL8 as seed ortholog is 100%.
Bootstrap support for L0PGC4 as seed ortholog is 100%.

Group of orthologs #280. Best score 145 bits
Score difference with first non-orthologous sequence - E.cuniculi:145 P.jiroveci:145

Q8SVV3              	100.00%		L0P7Q3              	100.00%
Bootstrap support for Q8SVV3 as seed ortholog is 100%.
Bootstrap support for L0P7Q3 as seed ortholog is 100%.

Group of orthologs #281. Best score 144 bits
Score difference with first non-orthologous sequence - E.cuniculi:42 P.jiroveci:144

Q8SRB7              	100.00%		L0P967              	100.00%
Bootstrap support for Q8SRB7 as seed ortholog is 84%.
Bootstrap support for L0P967 as seed ortholog is 100%.

Group of orthologs #282. Best score 144 bits
Score difference with first non-orthologous sequence - E.cuniculi:144 P.jiroveci:144

Q8SUH5              	100.00%		L0PC62              	100.00%
Bootstrap support for Q8SUH5 as seed ortholog is 100%.
Bootstrap support for L0PC62 as seed ortholog is 100%.

Group of orthologs #283. Best score 143 bits
Score difference with first non-orthologous sequence - E.cuniculi:143 P.jiroveci:143

Q8SU74              	100.00%		L0PEQ2              	100.00%
                    	       		L0P999              	59.63%
Bootstrap support for Q8SU74 as seed ortholog is 100%.
Bootstrap support for L0PEQ2 as seed ortholog is 100%.

Group of orthologs #284. Best score 142 bits
Score difference with first non-orthologous sequence - E.cuniculi:142 P.jiroveci:142

Q8SQQ5              	100.00%		L0PDP2              	100.00%
Bootstrap support for Q8SQQ5 as seed ortholog is 100%.
Bootstrap support for L0PDP2 as seed ortholog is 100%.

Group of orthologs #285. Best score 142 bits
Score difference with first non-orthologous sequence - E.cuniculi:142 P.jiroveci:142

Q8SQZ1              	100.00%		L0PF73              	100.00%
Bootstrap support for Q8SQZ1 as seed ortholog is 100%.
Bootstrap support for L0PF73 as seed ortholog is 100%.

Group of orthologs #286. Best score 141 bits
Score difference with first non-orthologous sequence - E.cuniculi:15 P.jiroveci:53

Q8SR68              	100.00%		L0P6X2              	100.00%
                    	       		L0PER5              	13.58%
                    	       		L0PGE5              	6.17%
Bootstrap support for Q8SR68 as seed ortholog is 67%.
Alternative seed ortholog is Q8SVZ2 (15 bits away from this cluster)
Bootstrap support for L0P6X2 as seed ortholog is 97%.

Group of orthologs #287. Best score 141 bits
Score difference with first non-orthologous sequence - E.cuniculi:141 P.jiroveci:141

Q8SS07              	100.00%		L0PBF3              	100.00%
Bootstrap support for Q8SS07 as seed ortholog is 100%.
Bootstrap support for L0PBF3 as seed ortholog is 100%.

Group of orthologs #288. Best score 140 bits
Score difference with first non-orthologous sequence - E.cuniculi:68 P.jiroveci:44

Q8SS11              	100.00%		L0PEF5              	100.00%
Bootstrap support for Q8SS11 as seed ortholog is 99%.
Bootstrap support for L0PEF5 as seed ortholog is 92%.

Group of orthologs #289. Best score 140 bits
Score difference with first non-orthologous sequence - E.cuniculi:140 P.jiroveci:140

Q8SUC4              	100.00%		L0PGE7              	100.00%
Bootstrap support for Q8SUC4 as seed ortholog is 100%.
Bootstrap support for L0PGE7 as seed ortholog is 100%.

Group of orthologs #290. Best score 139 bits
Score difference with first non-orthologous sequence - E.cuniculi:139 P.jiroveci:139

Q8SRC4              	100.00%		L0PA36              	100.00%
Bootstrap support for Q8SRC4 as seed ortholog is 100%.
Bootstrap support for L0PA36 as seed ortholog is 100%.

Group of orthologs #291. Best score 139 bits
Score difference with first non-orthologous sequence - E.cuniculi:139 P.jiroveci:139

Q8SWC9              	100.00%		L0PC53              	100.00%
Bootstrap support for Q8SWC9 as seed ortholog is 100%.
Bootstrap support for L0PC53 as seed ortholog is 100%.

Group of orthologs #292. Best score 139 bits
Score difference with first non-orthologous sequence - E.cuniculi:139 P.jiroveci:74

Q8SRF4              	100.00%		L0PHI3              	100.00%
Bootstrap support for Q8SRF4 as seed ortholog is 100%.
Bootstrap support for L0PHI3 as seed ortholog is 99%.

Group of orthologs #293. Best score 138 bits
Score difference with first non-orthologous sequence - E.cuniculi:138 P.jiroveci:138

Q8SS93              	100.00%		L0PCG0              	100.00%
Bootstrap support for Q8SS93 as seed ortholog is 100%.
Bootstrap support for L0PCG0 as seed ortholog is 100%.

Group of orthologs #294. Best score 138 bits
Score difference with first non-orthologous sequence - E.cuniculi:138 P.jiroveci:138

Q8SRH7              	100.00%		L0PGY0              	100.00%
Bootstrap support for Q8SRH7 as seed ortholog is 100%.
Bootstrap support for L0PGY0 as seed ortholog is 100%.

Group of orthologs #295. Best score 137 bits
Score difference with first non-orthologous sequence - E.cuniculi:137 P.jiroveci:137

Q8SQK7              	100.00%		L0PEI6              	100.00%
Bootstrap support for Q8SQK7 as seed ortholog is 100%.
Bootstrap support for L0PEI6 as seed ortholog is 100%.

Group of orthologs #296. Best score 136 bits
Score difference with first non-orthologous sequence - E.cuniculi:136 P.jiroveci:136

Q8SW07              	100.00%		L0PFZ0              	100.00%
Q8SUU4              	33.47%		
Bootstrap support for Q8SW07 as seed ortholog is 100%.
Bootstrap support for L0PFZ0 as seed ortholog is 100%.

Group of orthologs #297. Best score 136 bits
Score difference with first non-orthologous sequence - E.cuniculi:136 P.jiroveci:136

Q8SQV8              	100.00%		L0PE53              	100.00%
Bootstrap support for Q8SQV8 as seed ortholog is 100%.
Bootstrap support for L0PE53 as seed ortholog is 100%.

Group of orthologs #298. Best score 136 bits
Score difference with first non-orthologous sequence - E.cuniculi:136 P.jiroveci:136

Q8SRP7              	100.00%		L0PF71              	100.00%
Bootstrap support for Q8SRP7 as seed ortholog is 100%.
Bootstrap support for L0PF71 as seed ortholog is 100%.

Group of orthologs #299. Best score 135 bits
Score difference with first non-orthologous sequence - E.cuniculi:135 P.jiroveci:135

Q8STZ8              	100.00%		L0PCQ7              	100.00%
Bootstrap support for Q8STZ8 as seed ortholog is 100%.
Bootstrap support for L0PCQ7 as seed ortholog is 100%.

Group of orthologs #300. Best score 134 bits
Score difference with first non-orthologous sequence - E.cuniculi:134 P.jiroveci:134

Q8SV84              	100.00%		L0P7A4              	100.00%
Bootstrap support for Q8SV84 as seed ortholog is 100%.
Bootstrap support for L0P7A4 as seed ortholog is 100%.

Group of orthologs #301. Best score 134 bits
Score difference with first non-orthologous sequence - E.cuniculi:134 P.jiroveci:60

Q8SW59              	100.00%		L0P8C2              	100.00%
Bootstrap support for Q8SW59 as seed ortholog is 100%.
Bootstrap support for L0P8C2 as seed ortholog is 88%.

Group of orthologs #302. Best score 134 bits
Score difference with first non-orthologous sequence - E.cuniculi:134 P.jiroveci:134

Q8SRP2              	100.00%		L0PE58              	100.00%
Bootstrap support for Q8SRP2 as seed ortholog is 100%.
Bootstrap support for L0PE58 as seed ortholog is 100%.

Group of orthologs #303. Best score 134 bits
Score difference with first non-orthologous sequence - E.cuniculi:134 P.jiroveci:134

Q8SQW4              	100.00%		L0PFI2              	100.00%
Bootstrap support for Q8SQW4 as seed ortholog is 100%.
Bootstrap support for L0PFI2 as seed ortholog is 100%.

Group of orthologs #304. Best score 132 bits
Score difference with first non-orthologous sequence - E.cuniculi:132 P.jiroveci:132

Q8SR89              	100.00%		L0PG48              	100.00%
Bootstrap support for Q8SR89 as seed ortholog is 100%.
Bootstrap support for L0PG48 as seed ortholog is 100%.

Group of orthologs #305. Best score 131 bits
Score difference with first non-orthologous sequence - E.cuniculi:131 P.jiroveci:131

Q8SR24              	100.00%		L0PAQ7              	100.00%
                    	       		L0PE93              	12.36%
Bootstrap support for Q8SR24 as seed ortholog is 100%.
Bootstrap support for L0PAQ7 as seed ortholog is 100%.

Group of orthologs #306. Best score 131 bits
Score difference with first non-orthologous sequence - E.cuniculi:131 P.jiroveci:131

Q8SQL9              	100.00%		L0PB66              	100.00%
Bootstrap support for Q8SQL9 as seed ortholog is 100%.
Bootstrap support for L0PB66 as seed ortholog is 100%.

Group of orthologs #307. Best score 130 bits
Score difference with first non-orthologous sequence - E.cuniculi:130 P.jiroveci:130

Q8SRE7              	100.00%		L0PAE8              	100.00%
Bootstrap support for Q8SRE7 as seed ortholog is 100%.
Bootstrap support for L0PAE8 as seed ortholog is 100%.

Group of orthologs #308. Best score 129 bits
Score difference with first non-orthologous sequence - E.cuniculi:129 P.jiroveci:129

Q8SS81              	100.00%		L0PCR5              	100.00%
                    	       		L0P9C2              	68.28%
Bootstrap support for Q8SS81 as seed ortholog is 100%.
Bootstrap support for L0PCR5 as seed ortholog is 100%.

Group of orthologs #309. Best score 127 bits
Score difference with first non-orthologous sequence - E.cuniculi:127 P.jiroveci:127

Q8SW55              	100.00%		L0PCD5              	100.00%
Bootstrap support for Q8SW55 as seed ortholog is 100%.
Bootstrap support for L0PCD5 as seed ortholog is 100%.

Group of orthologs #310. Best score 126 bits
Score difference with first non-orthologous sequence - E.cuniculi:126 P.jiroveci:126

Q8SSG0              	100.00%		L0PFY9              	100.00%
Bootstrap support for Q8SSG0 as seed ortholog is 100%.
Bootstrap support for L0PFY9 as seed ortholog is 100%.

Group of orthologs #311. Best score 125 bits
Score difference with first non-orthologous sequence - E.cuniculi:125 P.jiroveci:125

Q8SS22              	100.00%		L0PE02              	100.00%
Bootstrap support for Q8SS22 as seed ortholog is 100%.
Bootstrap support for L0PE02 as seed ortholog is 100%.

Group of orthologs #312. Best score 124 bits
Score difference with first non-orthologous sequence - E.cuniculi:124 P.jiroveci:124

Q8SQR5              	100.00%		L0P8L5              	100.00%
Bootstrap support for Q8SQR5 as seed ortholog is 100%.
Bootstrap support for L0P8L5 as seed ortholog is 100%.

Group of orthologs #313. Best score 124 bits
Score difference with first non-orthologous sequence - E.cuniculi:124 P.jiroveci:124

Q8SQJ2              	100.00%		L0PBH3              	100.00%
Bootstrap support for Q8SQJ2 as seed ortholog is 100%.
Bootstrap support for L0PBH3 as seed ortholog is 100%.

Group of orthologs #314. Best score 124 bits
Score difference with first non-orthologous sequence - E.cuniculi:124 P.jiroveci:124

Q8SWP5              	100.00%		L0PGF5              	100.00%
Bootstrap support for Q8SWP5 as seed ortholog is 100%.
Bootstrap support for L0PGF5 as seed ortholog is 100%.

Group of orthologs #315. Best score 123 bits
Score difference with first non-orthologous sequence - E.cuniculi:123 P.jiroveci:123

Q8SRA7              	100.00%		L0PCA8              	100.00%
Bootstrap support for Q8SRA7 as seed ortholog is 100%.
Bootstrap support for L0PCA8 as seed ortholog is 100%.

Group of orthologs #316. Best score 123 bits
Score difference with first non-orthologous sequence - E.cuniculi:5 P.jiroveci:123

Q8SRC7              	100.00%		L0PG10              	100.00%
Bootstrap support for Q8SRC7 as seed ortholog is 53%.
Alternative seed ortholog is Q8SQV2 (5 bits away from this cluster)
Bootstrap support for L0PG10 as seed ortholog is 100%.

Group of orthologs #317. Best score 120 bits
Score difference with first non-orthologous sequence - E.cuniculi:120 P.jiroveci:120

Q8SVE1              	100.00%		L0PCA7              	100.00%
Bootstrap support for Q8SVE1 as seed ortholog is 100%.
Bootstrap support for L0PCA7 as seed ortholog is 100%.

Group of orthologs #318. Best score 118 bits
Score difference with first non-orthologous sequence - E.cuniculi:118 P.jiroveci:118

Q8SR25              	100.00%		L0P9K2              	100.00%
Bootstrap support for Q8SR25 as seed ortholog is 100%.
Bootstrap support for L0P9K2 as seed ortholog is 100%.

Group of orthologs #319. Best score 118 bits
Score difference with first non-orthologous sequence - E.cuniculi:118 P.jiroveci:118

Q8SSH0              	100.00%		L0P838              	100.00%
Bootstrap support for Q8SSH0 as seed ortholog is 100%.
Bootstrap support for L0P838 as seed ortholog is 100%.

Group of orthologs #320. Best score 118 bits
Score difference with first non-orthologous sequence - E.cuniculi:118 P.jiroveci:118

Q8SUF5              	100.00%		L0PG54              	100.00%
Bootstrap support for Q8SUF5 as seed ortholog is 100%.
Bootstrap support for L0PG54 as seed ortholog is 100%.

Group of orthologs #321. Best score 117 bits
Score difference with first non-orthologous sequence - E.cuniculi:117 P.jiroveci:117

Q8SRV3              	100.00%		L0PD35              	100.00%
Bootstrap support for Q8SRV3 as seed ortholog is 100%.
Bootstrap support for L0PD35 as seed ortholog is 100%.

Group of orthologs #322. Best score 117 bits
Score difference with first non-orthologous sequence - E.cuniculi:46 P.jiroveci:61

Q8SVQ5              	100.00%		L0PD17              	100.00%
Bootstrap support for Q8SVQ5 as seed ortholog is 85%.
Bootstrap support for L0PD17 as seed ortholog is 93%.

Group of orthologs #323. Best score 116 bits
Score difference with first non-orthologous sequence - E.cuniculi:116 P.jiroveci:116

Q8SS68              	100.00%		L0P8Q5              	100.00%
Bootstrap support for Q8SS68 as seed ortholog is 100%.
Bootstrap support for L0P8Q5 as seed ortholog is 100%.

Group of orthologs #324. Best score 115 bits
Score difference with first non-orthologous sequence - E.cuniculi:115 P.jiroveci:115

Q8SR78              	100.00%		L0P9U0              	100.00%
Bootstrap support for Q8SR78 as seed ortholog is 100%.
Bootstrap support for L0P9U0 as seed ortholog is 100%.

Group of orthologs #325. Best score 115 bits
Score difference with first non-orthologous sequence - E.cuniculi:115 P.jiroveci:115

Q8SRB3              	100.00%		L0PBS5              	100.00%
Bootstrap support for Q8SRB3 as seed ortholog is 100%.
Bootstrap support for L0PBS5 as seed ortholog is 100%.

Group of orthologs #326. Best score 115 bits
Score difference with first non-orthologous sequence - E.cuniculi:115 P.jiroveci:115

Q8SQR4              	100.00%		L0PDE4              	100.00%
Bootstrap support for Q8SQR4 as seed ortholog is 100%.
Bootstrap support for L0PDE4 as seed ortholog is 100%.

Group of orthologs #327. Best score 114 bits
Score difference with first non-orthologous sequence - E.cuniculi:114 P.jiroveci:3

Q8SRE1              	100.00%		L0PDB8              	100.00%
Q8SQZ8              	5.74%		
Bootstrap support for Q8SRE1 as seed ortholog is 100%.
Bootstrap support for L0PDB8 as seed ortholog is 55%.
Alternative seed ortholog is L0PAA8 (3 bits away from this cluster)

Group of orthologs #328. Best score 114 bits
Score difference with first non-orthologous sequence - E.cuniculi:114 P.jiroveci:18

Q8SSB6              	100.00%		L0PAA5              	100.00%
Bootstrap support for Q8SSB6 as seed ortholog is 100%.
Bootstrap support for L0PAA5 as seed ortholog is 69%.
Alternative seed ortholog is L0PFK9 (18 bits away from this cluster)

Group of orthologs #329. Best score 114 bits
Score difference with first non-orthologous sequence - E.cuniculi:114 P.jiroveci:114

Q8SS05              	100.00%		L0PFL8              	100.00%
Bootstrap support for Q8SS05 as seed ortholog is 100%.
Bootstrap support for L0PFL8 as seed ortholog is 100%.

Group of orthologs #330. Best score 113 bits
Score difference with first non-orthologous sequence - E.cuniculi:113 P.jiroveci:113

Q8SU68              	100.00%		L0P9I4              	100.00%
Bootstrap support for Q8SU68 as seed ortholog is 100%.
Bootstrap support for L0P9I4 as seed ortholog is 100%.

Group of orthologs #331. Best score 113 bits
Score difference with first non-orthologous sequence - E.cuniculi:113 P.jiroveci:113

Q8SRP5              	100.00%		L0PC18              	100.00%
Bootstrap support for Q8SRP5 as seed ortholog is 100%.
Bootstrap support for L0PC18 as seed ortholog is 100%.

Group of orthologs #332. Best score 112 bits
Score difference with first non-orthologous sequence - E.cuniculi:112 P.jiroveci:112

Q8SQK6              	100.00%		L0PBX2              	100.00%
Bootstrap support for Q8SQK6 as seed ortholog is 100%.
Bootstrap support for L0PBX2 as seed ortholog is 100%.

Group of orthologs #333. Best score 111 bits
Score difference with first non-orthologous sequence - E.cuniculi:111 P.jiroveci:111

Q8SUF0              	100.00%		L0PFL0              	100.00%
Bootstrap support for Q8SUF0 as seed ortholog is 100%.
Bootstrap support for L0PFL0 as seed ortholog is 100%.

Group of orthologs #334. Best score 110 bits
Score difference with first non-orthologous sequence - E.cuniculi:110 P.jiroveci:110

Q8SVB5              	100.00%		L0PD43              	100.00%
                    	       		L0PB48              	8.75%
Bootstrap support for Q8SVB5 as seed ortholog is 100%.
Bootstrap support for L0PD43 as seed ortholog is 100%.

Group of orthologs #335. Best score 110 bits
Score difference with first non-orthologous sequence - E.cuniculi:110 P.jiroveci:110

Q8SQX5              	100.00%		L0P8G0              	100.00%
Bootstrap support for Q8SQX5 as seed ortholog is 100%.
Bootstrap support for L0P8G0 as seed ortholog is 100%.

Group of orthologs #336. Best score 110 bits
Score difference with first non-orthologous sequence - E.cuniculi:110 P.jiroveci:110

Q8SRV4              	100.00%		L0P8B2              	100.00%
Bootstrap support for Q8SRV4 as seed ortholog is 100%.
Bootstrap support for L0P8B2 as seed ortholog is 100%.

Group of orthologs #337. Best score 110 bits
Score difference with first non-orthologous sequence - E.cuniculi:110 P.jiroveci:110

Q8SQN5              	100.00%		L0P9S7              	100.00%
Bootstrap support for Q8SQN5 as seed ortholog is 100%.
Bootstrap support for L0P9S7 as seed ortholog is 100%.

Group of orthologs #338. Best score 110 bits
Score difference with first non-orthologous sequence - E.cuniculi:110 P.jiroveci:110

Q8SQS0              	100.00%		L0PFC9              	100.00%
Bootstrap support for Q8SQS0 as seed ortholog is 100%.
Bootstrap support for L0PFC9 as seed ortholog is 100%.

Group of orthologs #339. Best score 110 bits
Score difference with first non-orthologous sequence - E.cuniculi:110 P.jiroveci:110

Q8STM7              	100.00%		L0PDZ3              	100.00%
Bootstrap support for Q8STM7 as seed ortholog is 100%.
Bootstrap support for L0PDZ3 as seed ortholog is 100%.

Group of orthologs #340. Best score 109 bits
Score difference with first non-orthologous sequence - E.cuniculi:109 P.jiroveci:109

Q8SRM8              	100.00%		L0PA28              	100.00%
Bootstrap support for Q8SRM8 as seed ortholog is 100%.
Bootstrap support for L0PA28 as seed ortholog is 100%.

Group of orthologs #341. Best score 109 bits
Score difference with first non-orthologous sequence - E.cuniculi:109 P.jiroveci:109

Q8SV19              	100.00%		L0PD86              	100.00%
Bootstrap support for Q8SV19 as seed ortholog is 100%.
Bootstrap support for L0PD86 as seed ortholog is 100%.

Group of orthologs #342. Best score 108 bits
Score difference with first non-orthologous sequence - E.cuniculi:108 P.jiroveci:108

Q8SWM3              	100.00%		L0PDS2              	100.00%
Bootstrap support for Q8SWM3 as seed ortholog is 100%.
Bootstrap support for L0PDS2 as seed ortholog is 100%.

Group of orthologs #343. Best score 107 bits
Score difference with first non-orthologous sequence - E.cuniculi:33 P.jiroveci:65

Q8SRU7              	100.00%		L0PFU1              	100.00%
                    	       		L0PB03              	10.84%
Bootstrap support for Q8SRU7 as seed ortholog is 88%.
Bootstrap support for L0PFU1 as seed ortholog is 99%.

Group of orthologs #344. Best score 107 bits
Score difference with first non-orthologous sequence - E.cuniculi:107 P.jiroveci:107

O62581              	100.00%		L0PB81              	100.00%
Bootstrap support for O62581 as seed ortholog is 100%.
Bootstrap support for L0PB81 as seed ortholog is 100%.

Group of orthologs #345. Best score 107 bits
Score difference with first non-orthologous sequence - E.cuniculi:107 P.jiroveci:107

Q8SR32              	100.00%		L0PCH6              	100.00%
Bootstrap support for Q8SR32 as seed ortholog is 100%.
Bootstrap support for L0PCH6 as seed ortholog is 100%.

Group of orthologs #346. Best score 107 bits
Score difference with first non-orthologous sequence - E.cuniculi:107 P.jiroveci:62

Q8SS44              	100.00%		L0PC75              	100.00%
Bootstrap support for Q8SS44 as seed ortholog is 100%.
Bootstrap support for L0PC75 as seed ortholog is 99%.

Group of orthologs #347. Best score 107 bits
Score difference with first non-orthologous sequence - E.cuniculi:107 P.jiroveci:107

Q8SUT2              	100.00%		L0PBT8              	100.00%
Bootstrap support for Q8SUT2 as seed ortholog is 100%.
Bootstrap support for L0PBT8 as seed ortholog is 100%.

Group of orthologs #348. Best score 106 bits
Score difference with first non-orthologous sequence - E.cuniculi:106 P.jiroveci:106

Q8SRG5              	100.00%		L0P7Z9              	100.00%
Bootstrap support for Q8SRG5 as seed ortholog is 100%.
Bootstrap support for L0P7Z9 as seed ortholog is 100%.

Group of orthologs #349. Best score 106 bits
Score difference with first non-orthologous sequence - E.cuniculi:106 P.jiroveci:106

Q8SR26              	100.00%		L0P8Q1              	100.00%
Bootstrap support for Q8SR26 as seed ortholog is 100%.
Bootstrap support for L0P8Q1 as seed ortholog is 100%.

Group of orthologs #350. Best score 106 bits
Score difference with first non-orthologous sequence - E.cuniculi:106 P.jiroveci:106

Q8SSA4              	100.00%		L0PCU6              	100.00%
Bootstrap support for Q8SSA4 as seed ortholog is 100%.
Bootstrap support for L0PCU6 as seed ortholog is 100%.

Group of orthologs #351. Best score 106 bits
Score difference with first non-orthologous sequence - E.cuniculi:106 P.jiroveci:106

Q8SSE2              	100.00%		L0PDS0              	100.00%
Bootstrap support for Q8SSE2 as seed ortholog is 100%.
Bootstrap support for L0PDS0 as seed ortholog is 100%.

Group of orthologs #352. Best score 106 bits
Score difference with first non-orthologous sequence - E.cuniculi:106 P.jiroveci:106

Q8SVX5              	100.00%		L0PG81              	100.00%
Bootstrap support for Q8SVX5 as seed ortholog is 100%.
Bootstrap support for L0PG81 as seed ortholog is 100%.

Group of orthologs #353. Best score 105 bits
Score difference with first non-orthologous sequence - E.cuniculi:105 P.jiroveci:105

Q8SRY3              	100.00%		L0PD70              	100.00%
                    	       		L0P9Q7              	83.36%
Bootstrap support for Q8SRY3 as seed ortholog is 100%.
Bootstrap support for L0PD70 as seed ortholog is 100%.

Group of orthologs #354. Best score 105 bits
Score difference with first non-orthologous sequence - E.cuniculi:105 P.jiroveci:105

Q8SV52              	100.00%		L0P8P0              	100.00%
Bootstrap support for Q8SV52 as seed ortholog is 100%.
Bootstrap support for L0P8P0 as seed ortholog is 100%.

Group of orthologs #355. Best score 104 bits
Score difference with first non-orthologous sequence - E.cuniculi:45 P.jiroveci:104

Q8SQH8              	100.00%		L0PC59              	100.00%
                    	       		L0P9E4              	35.43%
                    	       		L0PGM0              	14.17%
Bootstrap support for Q8SQH8 as seed ortholog is 96%.
Bootstrap support for L0PC59 as seed ortholog is 100%.

Group of orthologs #356. Best score 104 bits
Score difference with first non-orthologous sequence - E.cuniculi:104 P.jiroveci:104

Q8SS06              	100.00%		L0P9R8              	100.00%
Bootstrap support for Q8SS06 as seed ortholog is 100%.
Bootstrap support for L0P9R8 as seed ortholog is 100%.

Group of orthologs #357. Best score 104 bits
Score difference with first non-orthologous sequence - E.cuniculi:104 P.jiroveci:57

Q8SS60              	100.00%		L0P9N5              	100.00%
Bootstrap support for Q8SS60 as seed ortholog is 100%.
Bootstrap support for L0P9N5 as seed ortholog is 99%.

Group of orthologs #358. Best score 104 bits
Score difference with first non-orthologous sequence - E.cuniculi:104 P.jiroveci:104

Q8SQJ8              	100.00%		L0PFS1              	100.00%
Bootstrap support for Q8SQJ8 as seed ortholog is 100%.
Bootstrap support for L0PFS1 as seed ortholog is 100%.

Group of orthologs #359. Best score 104 bits
Score difference with first non-orthologous sequence - E.cuniculi:104 P.jiroveci:104

Q8SVI6              	100.00%		L0PBQ1              	100.00%
Bootstrap support for Q8SVI6 as seed ortholog is 100%.
Bootstrap support for L0PBQ1 as seed ortholog is 100%.

Group of orthologs #360. Best score 103 bits
Score difference with first non-orthologous sequence - E.cuniculi:103 P.jiroveci:103

Q8SS71              	100.00%		L0P6Z5              	100.00%
Bootstrap support for Q8SS71 as seed ortholog is 100%.
Bootstrap support for L0P6Z5 as seed ortholog is 100%.

Group of orthologs #361. Best score 103 bits
Score difference with first non-orthologous sequence - E.cuniculi:103 P.jiroveci:103

Q8STW4              	100.00%		L0P9M4              	100.00%
Bootstrap support for Q8STW4 as seed ortholog is 100%.
Bootstrap support for L0P9M4 as seed ortholog is 100%.

Group of orthologs #362. Best score 103 bits
Score difference with first non-orthologous sequence - E.cuniculi:103 P.jiroveci:103

Q8STY2              	100.00%		L0PFZ7              	100.00%
Bootstrap support for Q8STY2 as seed ortholog is 100%.
Bootstrap support for L0PFZ7 as seed ortholog is 100%.

Group of orthologs #363. Best score 102 bits
Score difference with first non-orthologous sequence - E.cuniculi:102 P.jiroveci:102

Q8SSC1              	100.00%		L0PC96              	100.00%
Bootstrap support for Q8SSC1 as seed ortholog is 100%.
Bootstrap support for L0PC96 as seed ortholog is 100%.

Group of orthologs #364. Best score 102 bits
Score difference with first non-orthologous sequence - E.cuniculi:102 P.jiroveci:102

Q8SW93              	100.00%		L0PCH8              	100.00%
Bootstrap support for Q8SW93 as seed ortholog is 100%.
Bootstrap support for L0PCH8 as seed ortholog is 100%.

Group of orthologs #365. Best score 101 bits
Score difference with first non-orthologous sequence - E.cuniculi:101 P.jiroveci:101

Q8SRZ7              	100.00%		L0P9G7              	100.00%
Bootstrap support for Q8SRZ7 as seed ortholog is 100%.
Bootstrap support for L0P9G7 as seed ortholog is 100%.

Group of orthologs #366. Best score 99 bits
Score difference with first non-orthologous sequence - E.cuniculi:99 P.jiroveci:99

Q8SRL9              	100.00%		L0PEF9              	100.00%
                    	       		L0PG49              	100.00%
Bootstrap support for Q8SRL9 as seed ortholog is 100%.
Bootstrap support for L0PEF9 as seed ortholog is 100%.
Bootstrap support for L0PG49 as seed ortholog is 100%.

Group of orthologs #367. Best score 99 bits
Score difference with first non-orthologous sequence - E.cuniculi:99 P.jiroveci:33

Q8SSF6              	100.00%		L0P9M3              	100.00%
Bootstrap support for Q8SSF6 as seed ortholog is 100%.
Bootstrap support for L0P9M3 as seed ortholog is 97%.

Group of orthologs #368. Best score 99 bits
Score difference with first non-orthologous sequence - E.cuniculi:99 P.jiroveci:99

Q8SRN6              	100.00%		L0PBX9              	100.00%
Bootstrap support for Q8SRN6 as seed ortholog is 100%.
Bootstrap support for L0PBX9 as seed ortholog is 100%.

Group of orthologs #369. Best score 99 bits
Score difference with first non-orthologous sequence - E.cuniculi:99 P.jiroveci:99

Q8SQW8              	100.00%		L0PFY6              	100.00%
Bootstrap support for Q8SQW8 as seed ortholog is 100%.
Bootstrap support for L0PFY6 as seed ortholog is 100%.

Group of orthologs #370. Best score 99 bits
Score difference with first non-orthologous sequence - E.cuniculi:99 P.jiroveci:99

Q8SSC2              	100.00%		L0PGZ5              	100.00%
Bootstrap support for Q8SSC2 as seed ortholog is 100%.
Bootstrap support for L0PGZ5 as seed ortholog is 100%.

Group of orthologs #371. Best score 98 bits
Score difference with first non-orthologous sequence - E.cuniculi:37 P.jiroveci:98

Q8SSB5              	100.00%		L0PGT3              	100.00%
Bootstrap support for Q8SSB5 as seed ortholog is 97%.
Bootstrap support for L0PGT3 as seed ortholog is 100%.

Group of orthologs #372. Best score 97 bits
Score difference with first non-orthologous sequence - E.cuniculi:97 P.jiroveci:97

Q8SRE9              	100.00%		L0PAZ1              	100.00%
Bootstrap support for Q8SRE9 as seed ortholog is 100%.
Bootstrap support for L0PAZ1 as seed ortholog is 100%.

Group of orthologs #373. Best score 97 bits
Score difference with first non-orthologous sequence - E.cuniculi:97 P.jiroveci:97

Q8SV30              	100.00%		L0PAZ6              	100.00%
Bootstrap support for Q8SV30 as seed ortholog is 100%.
Bootstrap support for L0PAZ6 as seed ortholog is 100%.

Group of orthologs #374. Best score 97 bits
Score difference with first non-orthologous sequence - E.cuniculi:97 P.jiroveci:97

Q8SQJ9              	100.00%		L0PG06              	100.00%
Bootstrap support for Q8SQJ9 as seed ortholog is 100%.
Bootstrap support for L0PG06 as seed ortholog is 100%.

Group of orthologs #375. Best score 97 bits
Score difference with first non-orthologous sequence - E.cuniculi:97 P.jiroveci:97

Q8SW46              	100.00%		L0PC70              	100.00%
Bootstrap support for Q8SW46 as seed ortholog is 100%.
Bootstrap support for L0PC70 as seed ortholog is 100%.

Group of orthologs #376. Best score 96 bits
Score difference with first non-orthologous sequence - E.cuniculi:96 P.jiroveci:96

Q8SS16              	100.00%		L0P9Y2              	100.00%
Bootstrap support for Q8SS16 as seed ortholog is 100%.
Bootstrap support for L0P9Y2 as seed ortholog is 100%.

Group of orthologs #377. Best score 96 bits
Score difference with first non-orthologous sequence - E.cuniculi:96 P.jiroveci:96

Q8SRG4              	100.00%		L0PCF7              	100.00%
Bootstrap support for Q8SRG4 as seed ortholog is 100%.
Bootstrap support for L0PCF7 as seed ortholog is 100%.

Group of orthologs #378. Best score 95 bits
Score difference with first non-orthologous sequence - E.cuniculi:95 P.jiroveci:95

Q8SRD7              	100.00%		L0PAC1              	100.00%
Bootstrap support for Q8SRD7 as seed ortholog is 100%.
Bootstrap support for L0PAC1 as seed ortholog is 100%.

Group of orthologs #379. Best score 95 bits
Score difference with first non-orthologous sequence - E.cuniculi:95 P.jiroveci:95

Q8SVK5              	100.00%		L0P852              	100.00%
Bootstrap support for Q8SVK5 as seed ortholog is 100%.
Bootstrap support for L0P852 as seed ortholog is 100%.

Group of orthologs #380. Best score 95 bits
Score difference with first non-orthologous sequence - E.cuniculi:34 P.jiroveci:21

Q8SRQ2              	100.00%		L0PH42              	100.00%
Bootstrap support for Q8SRQ2 as seed ortholog is 74%.
Alternative seed ortholog is Q8SSA5 (34 bits away from this cluster)
Bootstrap support for L0PH42 as seed ortholog is 69%.
Alternative seed ortholog is L0PCQ6 (21 bits away from this cluster)

Group of orthologs #381. Best score 95 bits
Score difference with first non-orthologous sequence - E.cuniculi:95 P.jiroveci:95

Q8SRN1              	100.00%		L0PHT7              	100.00%
Bootstrap support for Q8SRN1 as seed ortholog is 100%.
Bootstrap support for L0PHT7 as seed ortholog is 100%.

Group of orthologs #382. Best score 94 bits
Score difference with first non-orthologous sequence - E.cuniculi:94 P.jiroveci:94

Q8SRQ6              	100.00%		L0P778              	100.00%
Bootstrap support for Q8SRQ6 as seed ortholog is 100%.
Bootstrap support for L0P778 as seed ortholog is 100%.

Group of orthologs #383. Best score 94 bits
Score difference with first non-orthologous sequence - E.cuniculi:94 P.jiroveci:94

Q8SW06              	100.00%		L0P8J2              	100.00%
Bootstrap support for Q8SW06 as seed ortholog is 100%.
Bootstrap support for L0P8J2 as seed ortholog is 100%.

Group of orthologs #384. Best score 93 bits
Score difference with first non-orthologous sequence - E.cuniculi:39 P.jiroveci:39

Q8SRL7              	100.00%		L0PEP1              	100.00%
                    	       		L0PIJ3              	85.76%
Bootstrap support for Q8SRL7 as seed ortholog is 83%.
Bootstrap support for L0PEP1 as seed ortholog is 45%.
Alternative seed ortholog is L0P9V3 (39 bits away from this cluster)

Group of orthologs #385. Best score 93 bits
Score difference with first non-orthologous sequence - E.cuniculi:93 P.jiroveci:93

Q8SQS9              	100.00%		L0P949              	100.00%
Bootstrap support for Q8SQS9 as seed ortholog is 100%.
Bootstrap support for L0P949 as seed ortholog is 100%.

Group of orthologs #386. Best score 92 bits
Score difference with first non-orthologous sequence - E.cuniculi:92 P.jiroveci:92

Q8SR97              	100.00%		L0PBC5              	100.00%
Bootstrap support for Q8SR97 as seed ortholog is 100%.
Bootstrap support for L0PBC5 as seed ortholog is 100%.

Group of orthologs #387. Best score 92 bits
Score difference with first non-orthologous sequence - E.cuniculi:16 P.jiroveci:42

Q8SR59              	100.00%		L0PBV6              	100.00%
Bootstrap support for Q8SR59 as seed ortholog is 69%.
Alternative seed ortholog is Q8SR95 (16 bits away from this cluster)
Bootstrap support for L0PBV6 as seed ortholog is 88%.

Group of orthologs #388. Best score 92 bits
Score difference with first non-orthologous sequence - E.cuniculi:92 P.jiroveci:40

Q8SQV7              	100.00%		L0PD77              	100.00%
Bootstrap support for Q8SQV7 as seed ortholog is 100%.
Bootstrap support for L0PD77 as seed ortholog is 87%.

Group of orthologs #389. Best score 92 bits
Score difference with first non-orthologous sequence - E.cuniculi:92 P.jiroveci:92

Q8SR79              	100.00%		L0PFR9              	100.00%
Bootstrap support for Q8SR79 as seed ortholog is 100%.
Bootstrap support for L0PFR9 as seed ortholog is 100%.

Group of orthologs #390. Best score 92 bits
Score difference with first non-orthologous sequence - E.cuniculi:92 P.jiroveci:92

Q8SSH7              	100.00%		L0PF58              	100.00%
Bootstrap support for Q8SSH7 as seed ortholog is 100%.
Bootstrap support for L0PF58 as seed ortholog is 100%.

Group of orthologs #391. Best score 91 bits
Score difference with first non-orthologous sequence - E.cuniculi:91 P.jiroveci:91

Q8SRX4              	100.00%		L0P8F1              	100.00%
Bootstrap support for Q8SRX4 as seed ortholog is 100%.
Bootstrap support for L0P8F1 as seed ortholog is 100%.

Group of orthologs #392. Best score 91 bits
Score difference with first non-orthologous sequence - E.cuniculi:91 P.jiroveci:91

Q8SVL4              	100.00%		L0P816              	100.00%
Bootstrap support for Q8SVL4 as seed ortholog is 100%.
Bootstrap support for L0P816 as seed ortholog is 100%.

Group of orthologs #393. Best score 91 bits
Score difference with first non-orthologous sequence - E.cuniculi:91 P.jiroveci:91

Q8SRP4              	100.00%		L0PC24              	100.00%
Bootstrap support for Q8SRP4 as seed ortholog is 100%.
Bootstrap support for L0PC24 as seed ortholog is 100%.

Group of orthologs #394. Best score 90 bits
Score difference with first non-orthologous sequence - E.cuniculi:90 P.jiroveci:90

Q8SSB4              	100.00%		L0PDI7              	100.00%
Bootstrap support for Q8SSB4 as seed ortholog is 100%.
Bootstrap support for L0PDI7 as seed ortholog is 100%.

Group of orthologs #395. Best score 90 bits
Score difference with first non-orthologous sequence - E.cuniculi:90 P.jiroveci:90

Q8SWL8              	100.00%		L0PFI5              	100.00%
Bootstrap support for Q8SWL8 as seed ortholog is 100%.
Bootstrap support for L0PFI5 as seed ortholog is 100%.

Group of orthologs #396. Best score 89 bits
Score difference with first non-orthologous sequence - E.cuniculi:89 P.jiroveci:89

Q8SW23              	100.00%		L0PCC2              	100.00%
Bootstrap support for Q8SW23 as seed ortholog is 100%.
Bootstrap support for L0PCC2 as seed ortholog is 100%.

Group of orthologs #397. Best score 89 bits
Score difference with first non-orthologous sequence - E.cuniculi:21 P.jiroveci:89

Q8STN6              	100.00%		L0PFK0              	100.00%
Bootstrap support for Q8STN6 as seed ortholog is 78%.
Bootstrap support for L0PFK0 as seed ortholog is 100%.

Group of orthologs #398. Best score 88 bits
Score difference with first non-orthologous sequence - E.cuniculi:88 P.jiroveci:34

Q8SW52              	100.00%		L0PC66              	100.00%
                    	       		L0PBN8              	82.57%
Bootstrap support for Q8SW52 as seed ortholog is 100%.
Bootstrap support for L0PC66 as seed ortholog is 93%.

Group of orthologs #399. Best score 88 bits
Score difference with first non-orthologous sequence - E.cuniculi:88 P.jiroveci:88

Q8SSI5              	100.00%		L0P910              	100.00%
Bootstrap support for Q8SSI5 as seed ortholog is 100%.
Bootstrap support for L0P910 as seed ortholog is 100%.

Group of orthologs #400. Best score 88 bits
Score difference with first non-orthologous sequence - E.cuniculi:88 P.jiroveci:88

Q8SVR5              	100.00%		L0P7D0              	100.00%
Bootstrap support for Q8SVR5 as seed ortholog is 100%.
Bootstrap support for L0P7D0 as seed ortholog is 100%.

Group of orthologs #401. Best score 87 bits
Score difference with first non-orthologous sequence - E.cuniculi:87 P.jiroveci:87

Q8SRP6              	100.00%		L0PBE8              	100.00%
Bootstrap support for Q8SRP6 as seed ortholog is 100%.
Bootstrap support for L0PBE8 as seed ortholog is 100%.

Group of orthologs #402. Best score 86 bits
Score difference with first non-orthologous sequence - E.cuniculi:86 P.jiroveci:86

Q8SSE1              	100.00%		L0P8R2              	100.00%
                    	       		L0P7W8              	96.77%
Bootstrap support for Q8SSE1 as seed ortholog is 100%.
Bootstrap support for L0P8R2 as seed ortholog is 100%.

Group of orthologs #403. Best score 86 bits
Score difference with first non-orthologous sequence - E.cuniculi:86 P.jiroveci:86

Q8SR74              	100.00%		L0P806              	100.00%
Bootstrap support for Q8SR74 as seed ortholog is 100%.
Bootstrap support for L0P806 as seed ortholog is 100%.

Group of orthologs #404. Best score 86 bits
Score difference with first non-orthologous sequence - E.cuniculi:86 P.jiroveci:86

Q8SRW1              	100.00%		L0P9B8              	100.00%
Bootstrap support for Q8SRW1 as seed ortholog is 100%.
Bootstrap support for L0P9B8 as seed ortholog is 100%.

Group of orthologs #405. Best score 86 bits
Score difference with first non-orthologous sequence - E.cuniculi:86 P.jiroveci:4

Q8SVC2              	100.00%		L0P7E9              	100.00%
Bootstrap support for Q8SVC2 as seed ortholog is 100%.
Bootstrap support for L0P7E9 as seed ortholog is 51%.
Alternative seed ortholog is L0PEX1 (4 bits away from this cluster)

Group of orthologs #406. Best score 86 bits
Score difference with first non-orthologous sequence - E.cuniculi:28 P.jiroveci:86

Q8SQS5              	100.00%		L0PE17              	100.00%
Bootstrap support for Q8SQS5 as seed ortholog is 84%.
Bootstrap support for L0PE17 as seed ortholog is 100%.

Group of orthologs #407. Best score 86 bits
Score difference with first non-orthologous sequence - E.cuniculi:86 P.jiroveci:86

Q8SRE5              	100.00%		L0PDN9              	100.00%
Bootstrap support for Q8SRE5 as seed ortholog is 100%.
Bootstrap support for L0PDN9 as seed ortholog is 100%.

Group of orthologs #408. Best score 86 bits
Score difference with first non-orthologous sequence - E.cuniculi:86 P.jiroveci:86

Q8SRG8              	100.00%		L0PDP9              	100.00%
Bootstrap support for Q8SRG8 as seed ortholog is 100%.
Bootstrap support for L0PDP9 as seed ortholog is 100%.

Group of orthologs #409. Best score 86 bits
Score difference with first non-orthologous sequence - E.cuniculi:86 P.jiroveci:86

Q8SR92              	100.00%		L0PF16              	100.00%
Bootstrap support for Q8SR92 as seed ortholog is 100%.
Bootstrap support for L0PF16 as seed ortholog is 100%.

Group of orthologs #410. Best score 85 bits
Score difference with first non-orthologous sequence - E.cuniculi:85 P.jiroveci:85

Q8STR6              	100.00%		L0P995              	100.00%
Bootstrap support for Q8STR6 as seed ortholog is 100%.
Bootstrap support for L0P995 as seed ortholog is 100%.

Group of orthologs #411. Best score 85 bits
Score difference with first non-orthologous sequence - E.cuniculi:85 P.jiroveci:85

Q8SSK7              	100.00%		L0PBX3              	100.00%
Bootstrap support for Q8SSK7 as seed ortholog is 100%.
Bootstrap support for L0PBX3 as seed ortholog is 100%.

Group of orthologs #412. Best score 85 bits
Score difference with first non-orthologous sequence - E.cuniculi:85 P.jiroveci:5

Q8SW87              	100.00%		L0PA41              	100.00%
Bootstrap support for Q8SW87 as seed ortholog is 100%.
Bootstrap support for L0PA41 as seed ortholog is 44%.
Alternative seed ortholog is L0PA57 (5 bits away from this cluster)

Group of orthologs #413. Best score 85 bits
Score difference with first non-orthologous sequence - E.cuniculi:85 P.jiroveci:85

Q8SV53              	100.00%		L0PBX6              	100.00%
Bootstrap support for Q8SV53 as seed ortholog is 100%.
Bootstrap support for L0PBX6 as seed ortholog is 100%.

Group of orthologs #414. Best score 84 bits
Score difference with first non-orthologous sequence - E.cuniculi:84 P.jiroveci:84

Q8SRS3              	100.00%		L0PFT6              	100.00%
                    	       		L0P6V3              	42.43%
Bootstrap support for Q8SRS3 as seed ortholog is 100%.
Bootstrap support for L0PFT6 as seed ortholog is 100%.

Group of orthologs #415. Best score 84 bits
Score difference with first non-orthologous sequence - E.cuniculi:84 P.jiroveci:84

Q8SSM5              	100.00%		L0PB61              	100.00%
Bootstrap support for Q8SSM5 as seed ortholog is 100%.
Bootstrap support for L0PB61 as seed ortholog is 100%.

Group of orthologs #416. Best score 84 bits
Score difference with first non-orthologous sequence - E.cuniculi:84 P.jiroveci:84

Q8SSI9              	100.00%		L0PCI6              	100.00%
Bootstrap support for Q8SSI9 as seed ortholog is 100%.
Bootstrap support for L0PCI6 as seed ortholog is 100%.

Group of orthologs #417. Best score 84 bits
Score difference with first non-orthologous sequence - E.cuniculi:84 P.jiroveci:84

Q8SWN7              	100.00%		L0PBT0              	100.00%
Bootstrap support for Q8SWN7 as seed ortholog is 100%.
Bootstrap support for L0PBT0 as seed ortholog is 100%.

Group of orthologs #418. Best score 83 bits
Score difference with first non-orthologous sequence - E.cuniculi:83 P.jiroveci:83

Q8SRS6              	100.00%		L0PBK0              	100.00%
Bootstrap support for Q8SRS6 as seed ortholog is 100%.
Bootstrap support for L0PBK0 as seed ortholog is 100%.

Group of orthologs #419. Best score 83 bits
Score difference with first non-orthologous sequence - E.cuniculi:83 P.jiroveci:83

Q8SQN8              	100.00%		L0PCT7              	100.00%
Bootstrap support for Q8SQN8 as seed ortholog is 100%.
Bootstrap support for L0PCT7 as seed ortholog is 100%.

Group of orthologs #420. Best score 83 bits
Score difference with first non-orthologous sequence - E.cuniculi:83 P.jiroveci:21

Q8SS75              	100.00%		L0PBE1              	100.00%
Bootstrap support for Q8SS75 as seed ortholog is 100%.
Bootstrap support for L0PBE1 as seed ortholog is 89%.

Group of orthologs #421. Best score 83 bits
Score difference with first non-orthologous sequence - E.cuniculi:83 P.jiroveci:83

Q8SW56              	100.00%		L0PC80              	100.00%
Bootstrap support for Q8SW56 as seed ortholog is 100%.
Bootstrap support for L0PC80 as seed ortholog is 100%.

Group of orthologs #422. Best score 83 bits
Score difference with first non-orthologous sequence - E.cuniculi:83 P.jiroveci:83

Q8SUL0              	100.00%		L0PF44              	100.00%
Bootstrap support for Q8SUL0 as seed ortholog is 100%.
Bootstrap support for L0PF44 as seed ortholog is 100%.

Group of orthologs #423. Best score 83 bits
Score difference with first non-orthologous sequence - E.cuniculi:83 P.jiroveci:83

Q8SUX1              	100.00%		L0PFF4              	100.00%
Bootstrap support for Q8SUX1 as seed ortholog is 100%.
Bootstrap support for L0PFF4 as seed ortholog is 100%.

Group of orthologs #424. Best score 82 bits
Score difference with first non-orthologous sequence - E.cuniculi:82 P.jiroveci:82

Q8SRA8              	100.00%		L0PD97              	100.00%
Bootstrap support for Q8SRA8 as seed ortholog is 100%.
Bootstrap support for L0PD97 as seed ortholog is 100%.

Group of orthologs #425. Best score 82 bits
Score difference with first non-orthologous sequence - E.cuniculi:32 P.jiroveci:82

Q8SRN0              	100.00%		L0PDV0              	100.00%
Bootstrap support for Q8SRN0 as seed ortholog is 74%.
Alternative seed ortholog is Q8SSH8 (32 bits away from this cluster)
Bootstrap support for L0PDV0 as seed ortholog is 100%.

Group of orthologs #426. Best score 82 bits
Score difference with first non-orthologous sequence - E.cuniculi:82 P.jiroveci:82

Q8SU05              	100.00%		L0PDW4              	100.00%
Bootstrap support for Q8SU05 as seed ortholog is 100%.
Bootstrap support for L0PDW4 as seed ortholog is 100%.

Group of orthologs #427. Best score 82 bits
Score difference with first non-orthologous sequence - E.cuniculi:82 P.jiroveci:26

Q8SRB0              	100.00%		L0PFY7              	100.00%
Bootstrap support for Q8SRB0 as seed ortholog is 100%.
Bootstrap support for L0PFY7 as seed ortholog is 81%.

Group of orthologs #428. Best score 82 bits
Score difference with first non-orthologous sequence - E.cuniculi:82 P.jiroveci:13

Q8SWJ6              	100.00%		L0PF38              	100.00%
Bootstrap support for Q8SWJ6 as seed ortholog is 100%.
Bootstrap support for L0PF38 as seed ortholog is 70%.
Alternative seed ortholog is L0PA97 (13 bits away from this cluster)

Group of orthologs #429. Best score 82 bits
Score difference with first non-orthologous sequence - E.cuniculi:82 P.jiroveci:82

Q8SW53              	100.00%		L0PGP5              	100.00%
Bootstrap support for Q8SW53 as seed ortholog is 100%.
Bootstrap support for L0PGP5 as seed ortholog is 100%.

Group of orthologs #430. Best score 81 bits
Score difference with first non-orthologous sequence - E.cuniculi:3 P.jiroveci:81

Q8SR20              	100.00%		L0P984              	100.00%
Bootstrap support for Q8SR20 as seed ortholog is 55%.
Alternative seed ortholog is Q8SS20 (3 bits away from this cluster)
Bootstrap support for L0P984 as seed ortholog is 100%.

Group of orthologs #431. Best score 81 bits
Score difference with first non-orthologous sequence - E.cuniculi:81 P.jiroveci:81

Q8SQK5              	100.00%		L0PEN8              	100.00%
Bootstrap support for Q8SQK5 as seed ortholog is 100%.
Bootstrap support for L0PEN8 as seed ortholog is 100%.

Group of orthologs #432. Best score 81 bits
Score difference with first non-orthologous sequence - E.cuniculi:24 P.jiroveci:81

Q8SS09              	100.00%		L0PEI1              	100.00%
Bootstrap support for Q8SS09 as seed ortholog is 80%.
Bootstrap support for L0PEI1 as seed ortholog is 100%.

Group of orthologs #433. Best score 81 bits
Score difference with first non-orthologous sequence - E.cuniculi:81 P.jiroveci:81

Q8SU34              	100.00%		L0PGC9              	100.00%
Bootstrap support for Q8SU34 as seed ortholog is 100%.
Bootstrap support for L0PGC9 as seed ortholog is 100%.

Group of orthologs #434. Best score 80 bits
Score difference with first non-orthologous sequence - E.cuniculi:80 P.jiroveci:80

Q8STQ5              	100.00%		L0P8V3              	100.00%
Bootstrap support for Q8STQ5 as seed ortholog is 100%.
Bootstrap support for L0P8V3 as seed ortholog is 100%.

Group of orthologs #435. Best score 79 bits
Score difference with first non-orthologous sequence - E.cuniculi:15 P.jiroveci:79

Q8STV7              	100.00%		L0P9I3              	100.00%
Bootstrap support for Q8STV7 as seed ortholog is 67%.
Alternative seed ortholog is Q8STX6 (15 bits away from this cluster)
Bootstrap support for L0P9I3 as seed ortholog is 100%.

Group of orthologs #436. Best score 79 bits
Score difference with first non-orthologous sequence - E.cuniculi:79 P.jiroveci:79

Q8SVI2              	100.00%		L0P914              	100.00%
Bootstrap support for Q8SVI2 as seed ortholog is 100%.
Bootstrap support for L0P914 as seed ortholog is 100%.

Group of orthologs #437. Best score 79 bits
Score difference with first non-orthologous sequence - E.cuniculi:79 P.jiroveci:79

Q8SQJ5              	100.00%		L0PDX2              	100.00%
Bootstrap support for Q8SQJ5 as seed ortholog is 100%.
Bootstrap support for L0PDX2 as seed ortholog is 100%.

Group of orthologs #438. Best score 79 bits
Score difference with first non-orthologous sequence - E.cuniculi:79 P.jiroveci:79

Q8SWK0              	100.00%		L0P8S1              	100.00%
Bootstrap support for Q8SWK0 as seed ortholog is 100%.
Bootstrap support for L0P8S1 as seed ortholog is 100%.

Group of orthologs #439. Best score 79 bits
Score difference with first non-orthologous sequence - E.cuniculi:79 P.jiroveci:79

Q8SQM7              	100.00%		L0PH80              	100.00%
Bootstrap support for Q8SQM7 as seed ortholog is 100%.
Bootstrap support for L0PH80 as seed ortholog is 100%.

Group of orthologs #440. Best score 79 bits
Score difference with first non-orthologous sequence - E.cuniculi:79 P.jiroveci:79

Q8SRS5              	100.00%		L0PH83              	100.00%
Bootstrap support for Q8SRS5 as seed ortholog is 100%.
Bootstrap support for L0PH83 as seed ortholog is 100%.

Group of orthologs #441. Best score 79 bits
Score difference with first non-orthologous sequence - E.cuniculi:79 P.jiroveci:79

Q8SUC6              	100.00%		L0PFZ8              	100.00%
Bootstrap support for Q8SUC6 as seed ortholog is 100%.
Bootstrap support for L0PFZ8 as seed ortholog is 100%.

Group of orthologs #442. Best score 77 bits
Score difference with first non-orthologous sequence - E.cuniculi:77 P.jiroveci:77

Q8SVX7              	100.00%		L0PBD3              	100.00%
                    	       		L0PCE5              	7.20%
Bootstrap support for Q8SVX7 as seed ortholog is 100%.
Bootstrap support for L0PBD3 as seed ortholog is 100%.

Group of orthologs #443. Best score 77 bits
Score difference with first non-orthologous sequence - E.cuniculi:77 P.jiroveci:77

Q8SVS5              	100.00%		L0PI61              	100.00%
                    	       		L0PA50              	42.18%
Bootstrap support for Q8SVS5 as seed ortholog is 100%.
Bootstrap support for L0PI61 as seed ortholog is 100%.

Group of orthologs #444. Best score 76 bits
Score difference with first non-orthologous sequence - E.cuniculi:76 P.jiroveci:76

Q8SQS7              	100.00%		L0P925              	100.00%
Bootstrap support for Q8SQS7 as seed ortholog is 100%.
Bootstrap support for L0P925 as seed ortholog is 100%.

Group of orthologs #445. Best score 76 bits
Score difference with first non-orthologous sequence - E.cuniculi:76 P.jiroveci:76

Q8SSE0              	100.00%		L0PE77              	100.00%
Bootstrap support for Q8SSE0 as seed ortholog is 100%.
Bootstrap support for L0PE77 as seed ortholog is 100%.

Group of orthologs #446. Best score 76 bits
Score difference with first non-orthologous sequence - E.cuniculi:76 P.jiroveci:76

Q8SUY4              	100.00%		L0PF46              	100.00%
Bootstrap support for Q8SUY4 as seed ortholog is 100%.
Bootstrap support for L0PF46 as seed ortholog is 100%.

Group of orthologs #447. Best score 75 bits
Score difference with first non-orthologous sequence - E.cuniculi:75 P.jiroveci:30

Q8SR04              	100.00%		L0P9W6              	100.00%
Bootstrap support for Q8SR04 as seed ortholog is 100%.
Bootstrap support for L0P9W6 as seed ortholog is 96%.

Group of orthologs #448. Best score 75 bits
Score difference with first non-orthologous sequence - E.cuniculi:75 P.jiroveci:75

Q8SSD7              	100.00%		L0PBY9              	100.00%
Bootstrap support for Q8SSD7 as seed ortholog is 100%.
Bootstrap support for L0PBY9 as seed ortholog is 100%.

Group of orthologs #449. Best score 75 bits
Score difference with first non-orthologous sequence - E.cuniculi:75 P.jiroveci:75

Q8SVJ1              	100.00%		L0PB62              	100.00%
Bootstrap support for Q8SVJ1 as seed ortholog is 100%.
Bootstrap support for L0PB62 as seed ortholog is 100%.

Group of orthologs #450. Best score 74 bits
Score difference with first non-orthologous sequence - E.cuniculi:74 P.jiroveci:74

Q8SSL0              	100.00%		L0PAR8              	100.00%
Bootstrap support for Q8SSL0 as seed ortholog is 100%.
Bootstrap support for L0PAR8 as seed ortholog is 100%.

Group of orthologs #451. Best score 74 bits
Score difference with first non-orthologous sequence - E.cuniculi:74 P.jiroveci:6

Q8SWF0              	100.00%		L0P8Q6              	100.00%
Bootstrap support for Q8SWF0 as seed ortholog is 100%.
Bootstrap support for L0P8Q6 as seed ortholog is 54%.
Alternative seed ortholog is L0PIK1 (6 bits away from this cluster)

Group of orthologs #452. Best score 74 bits
Score difference with first non-orthologous sequence - E.cuniculi:74 P.jiroveci:74

Q8SUZ2              	100.00%		L0PBU6              	100.00%
Bootstrap support for Q8SUZ2 as seed ortholog is 100%.
Bootstrap support for L0PBU6 as seed ortholog is 100%.

Group of orthologs #453. Best score 74 bits
Score difference with first non-orthologous sequence - E.cuniculi:74 P.jiroveci:74

Q8SV09              	100.00%		L0PEV3              	100.00%
Bootstrap support for Q8SV09 as seed ortholog is 100%.
Bootstrap support for L0PEV3 as seed ortholog is 100%.

Group of orthologs #454. Best score 73 bits
Score difference with first non-orthologous sequence - E.cuniculi:73 P.jiroveci:73

Q8SU17              	100.00%		L0PCH0              	100.00%
Bootstrap support for Q8SU17 as seed ortholog is 100%.
Bootstrap support for L0PCH0 as seed ortholog is 100%.

Group of orthologs #455. Best score 73 bits
Score difference with first non-orthologous sequence - E.cuniculi:73 P.jiroveci:73

Q8SUA2              	100.00%		L0PFX5              	100.00%
Bootstrap support for Q8SUA2 as seed ortholog is 100%.
Bootstrap support for L0PFX5 as seed ortholog is 100%.

Group of orthologs #456. Best score 72 bits
Score difference with first non-orthologous sequence - E.cuniculi:72 P.jiroveci:72

Q8SSJ3              	100.00%		L0PAJ6              	100.00%
Bootstrap support for Q8SSJ3 as seed ortholog is 100%.
Bootstrap support for L0PAJ6 as seed ortholog is 100%.

Group of orthologs #457. Best score 72 bits
Score difference with first non-orthologous sequence - E.cuniculi:72 P.jiroveci:72

Q8SSA1              	100.00%		L0PAV2              	100.00%
Bootstrap support for Q8SSA1 as seed ortholog is 100%.
Bootstrap support for L0PAV2 as seed ortholog is 100%.

Group of orthologs #458. Best score 72 bits
Score difference with first non-orthologous sequence - E.cuniculi:72 P.jiroveci:72

Q8SWF6              	100.00%		L0P7Y1              	100.00%
Bootstrap support for Q8SWF6 as seed ortholog is 100%.
Bootstrap support for L0P7Y1 as seed ortholog is 100%.

Group of orthologs #459. Best score 72 bits
Score difference with first non-orthologous sequence - E.cuniculi:72 P.jiroveci:72

Q8SV74              	100.00%		L0PHQ1              	100.00%
Bootstrap support for Q8SV74 as seed ortholog is 100%.
Bootstrap support for L0PHQ1 as seed ortholog is 100%.

Group of orthologs #460. Best score 72 bits
Score difference with first non-orthologous sequence - E.cuniculi:72 P.jiroveci:72

Q8SWB8              	100.00%		L0PGP3              	100.00%
Bootstrap support for Q8SWB8 as seed ortholog is 100%.
Bootstrap support for L0PGP3 as seed ortholog is 100%.

Group of orthologs #461. Best score 71 bits
Score difference with first non-orthologous sequence - E.cuniculi:71 P.jiroveci:71

Q8SRA0              	100.00%		L0P8U3              	100.00%
Bootstrap support for Q8SRA0 as seed ortholog is 100%.
Bootstrap support for L0P8U3 as seed ortholog is 100%.

Group of orthologs #462. Best score 71 bits
Score difference with first non-orthologous sequence - E.cuniculi:71 P.jiroveci:71

Q8SSB3              	100.00%		L0P9L0              	100.00%
Bootstrap support for Q8SSB3 as seed ortholog is 100%.
Bootstrap support for L0P9L0 as seed ortholog is 100%.

Group of orthologs #463. Best score 71 bits
Score difference with first non-orthologous sequence - E.cuniculi:71 P.jiroveci:71

Q8SVS9              	100.00%		L0P7V4              	100.00%
Bootstrap support for Q8SVS9 as seed ortholog is 100%.
Bootstrap support for L0P7V4 as seed ortholog is 100%.

Group of orthologs #464. Best score 71 bits
Score difference with first non-orthologous sequence - E.cuniculi:71 P.jiroveci:71

Q8SR06              	100.00%		L0PEG0              	100.00%
Bootstrap support for Q8SR06 as seed ortholog is 100%.
Bootstrap support for L0PEG0 as seed ortholog is 100%.

Group of orthologs #465. Best score 70 bits
Score difference with first non-orthologous sequence - E.cuniculi:70 P.jiroveci:70

Q8SQN4              	100.00%		L0P9T6              	100.00%
Bootstrap support for Q8SQN4 as seed ortholog is 100%.
Bootstrap support for L0P9T6 as seed ortholog is 100%.

Group of orthologs #466. Best score 70 bits
Score difference with first non-orthologous sequence - E.cuniculi:70 P.jiroveci:70

Q8SQT1              	100.00%		L0PBQ7              	100.00%
Bootstrap support for Q8SQT1 as seed ortholog is 100%.
Bootstrap support for L0PBQ7 as seed ortholog is 100%.

Group of orthologs #467. Best score 70 bits
Score difference with first non-orthologous sequence - E.cuniculi:70 P.jiroveci:70

Q8SRU6              	100.00%		L0PBJ0              	100.00%
Bootstrap support for Q8SRU6 as seed ortholog is 100%.
Bootstrap support for L0PBJ0 as seed ortholog is 100%.

Group of orthologs #468. Best score 70 bits
Score difference with first non-orthologous sequence - E.cuniculi:70 P.jiroveci:70

Q8SU33              	100.00%		L0PBH8              	100.00%
Bootstrap support for Q8SU33 as seed ortholog is 100%.
Bootstrap support for L0PBH8 as seed ortholog is 100%.

Group of orthologs #469. Best score 70 bits
Score difference with first non-orthologous sequence - E.cuniculi:70 P.jiroveci:70

Q8SR41              	100.00%		L0PEV4              	100.00%
Bootstrap support for Q8SR41 as seed ortholog is 100%.
Bootstrap support for L0PEV4 as seed ortholog is 100%.

Group of orthologs #470. Best score 70 bits
Score difference with first non-orthologous sequence - E.cuniculi:70 P.jiroveci:70

Q8SS88              	100.00%		L0PGX3              	100.00%
Bootstrap support for Q8SS88 as seed ortholog is 100%.
Bootstrap support for L0PGX3 as seed ortholog is 100%.

Group of orthologs #471. Best score 69 bits
Score difference with first non-orthologous sequence - E.cuniculi:69 P.jiroveci:69

O62583              	100.00%		L0P7T1              	100.00%
Bootstrap support for O62583 as seed ortholog is 100%.
Bootstrap support for L0P7T1 as seed ortholog is 100%.

Group of orthologs #472. Best score 69 bits
Score difference with first non-orthologous sequence - E.cuniculi:69 P.jiroveci:69

Q8SU58              	100.00%		L0P8R8              	100.00%
Bootstrap support for Q8SU58 as seed ortholog is 100%.
Bootstrap support for L0P8R8 as seed ortholog is 100%.

Group of orthologs #473. Best score 69 bits
Score difference with first non-orthologous sequence - E.cuniculi:69 P.jiroveci:69

Q8SVU8              	100.00%		L0P7A1              	100.00%
Bootstrap support for Q8SVU8 as seed ortholog is 100%.
Bootstrap support for L0P7A1 as seed ortholog is 100%.

Group of orthologs #474. Best score 69 bits
Score difference with first non-orthologous sequence - E.cuniculi:69 P.jiroveci:69

Q8SVM3              	100.00%		L0PAQ5              	100.00%
Bootstrap support for Q8SVM3 as seed ortholog is 100%.
Bootstrap support for L0PAQ5 as seed ortholog is 100%.

Group of orthologs #475. Best score 69 bits
Score difference with first non-orthologous sequence - E.cuniculi:69 P.jiroveci:69

Q8SRE8              	100.00%		L0PF79              	100.00%
Bootstrap support for Q8SRE8 as seed ortholog is 100%.
Bootstrap support for L0PF79 as seed ortholog is 100%.

Group of orthologs #476. Best score 68 bits
Score difference with first non-orthologous sequence - E.cuniculi:68 P.jiroveci:68

Q8SU39              	100.00%		L0P9V4              	100.00%
Bootstrap support for Q8SU39 as seed ortholog is 100%.
Bootstrap support for L0P9V4 as seed ortholog is 100%.

Group of orthologs #477. Best score 68 bits
Score difference with first non-orthologous sequence - E.cuniculi:68 P.jiroveci:68

Q8SQT6              	100.00%		L0PGI8              	100.00%
Bootstrap support for Q8SQT6 as seed ortholog is 100%.
Bootstrap support for L0PGI8 as seed ortholog is 100%.

Group of orthologs #478. Best score 67 bits
Score difference with first non-orthologous sequence - E.cuniculi:67 P.jiroveci:67

Q8STT5              	100.00%		L0P7L2              	100.00%
                    	       		L0PFZ6              	98.63%
Bootstrap support for Q8STT5 as seed ortholog is 100%.
Bootstrap support for L0P7L2 as seed ortholog is 100%.

Group of orthologs #479. Best score 67 bits
Score difference with first non-orthologous sequence - E.cuniculi:67 P.jiroveci:67

Q8SRZ9              	100.00%		L0PGL1              	100.00%
Bootstrap support for Q8SRZ9 as seed ortholog is 100%.
Bootstrap support for L0PGL1 as seed ortholog is 100%.

Group of orthologs #480. Best score 66 bits
Score difference with first non-orthologous sequence - E.cuniculi:66 P.jiroveci:66

Q8SRU9              	100.00%		L0PB27              	100.00%
Bootstrap support for Q8SRU9 as seed ortholog is 100%.
Bootstrap support for L0PB27 as seed ortholog is 100%.

Group of orthologs #481. Best score 66 bits
Score difference with first non-orthologous sequence - E.cuniculi:66 P.jiroveci:66

Q8SSD1              	100.00%		L0PC84              	100.00%
Bootstrap support for Q8SSD1 as seed ortholog is 100%.
Bootstrap support for L0PC84 as seed ortholog is 100%.

Group of orthologs #482. Best score 66 bits
Score difference with first non-orthologous sequence - E.cuniculi:66 P.jiroveci:66

I7KFW8              	100.00%		L0PEE1              	100.00%
Bootstrap support for I7KFW8 as seed ortholog is 100%.
Bootstrap support for L0PEE1 as seed ortholog is 100%.

Group of orthologs #483. Best score 65 bits
Score difference with first non-orthologous sequence - E.cuniculi:65 P.jiroveci:65

Q8SQS8              	100.00%		L0P8H6              	100.00%
Bootstrap support for Q8SQS8 as seed ortholog is 100%.
Bootstrap support for L0P8H6 as seed ortholog is 100%.

Group of orthologs #484. Best score 65 bits
Score difference with first non-orthologous sequence - E.cuniculi:65 P.jiroveci:65

Q8SRU1              	100.00%		L0PBI9              	100.00%
Bootstrap support for Q8SRU1 as seed ortholog is 100%.
Bootstrap support for L0PBI9 as seed ortholog is 100%.

Group of orthologs #485. Best score 65 bits
Score difference with first non-orthologous sequence - E.cuniculi:65 P.jiroveci:65

Q8STX8              	100.00%		L0PFE9              	100.00%
Bootstrap support for Q8STX8 as seed ortholog is 100%.
Bootstrap support for L0PFE9 as seed ortholog is 100%.

Group of orthologs #486. Best score 64 bits
Score difference with first non-orthologous sequence - E.cuniculi:64 P.jiroveci:64

Q8SW72              	100.00%		L0PCI8              	100.00%
Bootstrap support for Q8SW72 as seed ortholog is 100%.
Bootstrap support for L0PCI8 as seed ortholog is 100%.

Group of orthologs #487. Best score 64 bits
Score difference with first non-orthologous sequence - E.cuniculi:64 P.jiroveci:64

Q8SWN5              	100.00%		L0PDW6              	100.00%
Bootstrap support for Q8SWN5 as seed ortholog is 100%.
Bootstrap support for L0PDW6 as seed ortholog is 100%.

Group of orthologs #488. Best score 62 bits
Score difference with first non-orthologous sequence - E.cuniculi:62 P.jiroveci:62

Q8SR91              	100.00%		L0P7G9              	100.00%
Bootstrap support for Q8SR91 as seed ortholog is 100%.
Bootstrap support for L0P7G9 as seed ortholog is 100%.

Group of orthologs #489. Best score 62 bits
Score difference with first non-orthologous sequence - E.cuniculi:62 P.jiroveci:62

Q8SQU1              	100.00%		L0P9R5              	100.00%
Bootstrap support for Q8SQU1 as seed ortholog is 100%.
Bootstrap support for L0P9R5 as seed ortholog is 100%.

Group of orthologs #490. Best score 62 bits
Score difference with first non-orthologous sequence - E.cuniculi:62 P.jiroveci:62

Q8SS37              	100.00%		L0PF82              	100.00%
Bootstrap support for Q8SS37 as seed ortholog is 100%.
Bootstrap support for L0PF82 as seed ortholog is 100%.

Group of orthologs #491. Best score 62 bits
Score difference with first non-orthologous sequence - E.cuniculi:62 P.jiroveci:62

Q8SRE6              	100.00%		L0PG87              	100.00%
Bootstrap support for Q8SRE6 as seed ortholog is 100%.
Bootstrap support for L0PG87 as seed ortholog is 100%.

Group of orthologs #492. Best score 61 bits
Score difference with first non-orthologous sequence - E.cuniculi:61 P.jiroveci:61

Q8SRC9              	100.00%		L0PD07              	100.00%
Bootstrap support for Q8SRC9 as seed ortholog is 100%.
Bootstrap support for L0PD07 as seed ortholog is 100%.

Group of orthologs #493. Best score 61 bits
Score difference with first non-orthologous sequence - E.cuniculi:61 P.jiroveci:61

Q8SQN0              	100.00%		L0PEB3              	100.00%
Bootstrap support for Q8SQN0 as seed ortholog is 100%.
Bootstrap support for L0PEB3 as seed ortholog is 100%.

Group of orthologs #494. Best score 61 bits
Score difference with first non-orthologous sequence - E.cuniculi:61 P.jiroveci:61

Q8STN5              	100.00%		L0PCR0              	100.00%
Bootstrap support for Q8STN5 as seed ortholog is 100%.
Bootstrap support for L0PCR0 as seed ortholog is 100%.

Group of orthologs #495. Best score 60 bits
Score difference with first non-orthologous sequence - E.cuniculi:60 P.jiroveci:60

Q8SSC3              	100.00%		L0P939              	100.00%
                    	       		L0PFG4              	91.21%
Bootstrap support for Q8SSC3 as seed ortholog is 100%.
Bootstrap support for L0P939 as seed ortholog is 100%.

Group of orthologs #496. Best score 60 bits
Score difference with first non-orthologous sequence - E.cuniculi:60 P.jiroveci:60

I7L8K7              	100.00%		L0PEX0              	100.00%
Bootstrap support for I7L8K7 as seed ortholog is 100%.
Bootstrap support for L0PEX0 as seed ortholog is 100%.

Group of orthologs #497. Best score 60 bits
Score difference with first non-orthologous sequence - E.cuniculi:60 P.jiroveci:60

Q8SVG7              	100.00%		L0PE76              	100.00%
Bootstrap support for Q8SVG7 as seed ortholog is 100%.
Bootstrap support for L0PE76 as seed ortholog is 100%.

Group of orthologs #498. Best score 60 bits
Score difference with first non-orthologous sequence - E.cuniculi:60 P.jiroveci:60

Q8SWI3              	100.00%		L0PII9              	100.00%
Bootstrap support for Q8SWI3 as seed ortholog is 100%.
Bootstrap support for L0PII9 as seed ortholog is 100%.

Group of orthologs #499. Best score 59 bits
Score difference with first non-orthologous sequence - E.cuniculi:59 P.jiroveci:59

Q8SRE4              	100.00%		L0PDT5              	100.00%
Bootstrap support for Q8SRE4 as seed ortholog is 100%.
Bootstrap support for L0PDT5 as seed ortholog is 100%.

Group of orthologs #500. Best score 59 bits
Score difference with first non-orthologous sequence - E.cuniculi:59 P.jiroveci:59

Q8SUE2              	100.00%		L0PBR0              	100.00%
Bootstrap support for Q8SUE2 as seed ortholog is 100%.
Bootstrap support for L0PBR0 as seed ortholog is 100%.

Group of orthologs #501. Best score 58 bits
Score difference with first non-orthologous sequence - E.cuniculi:58 P.jiroveci:58

Q8STQ1              	100.00%		L0P7T7              	100.00%
Bootstrap support for Q8STQ1 as seed ortholog is 100%.
Bootstrap support for L0P7T7 as seed ortholog is 100%.

Group of orthologs #502. Best score 58 bits
Score difference with first non-orthologous sequence - E.cuniculi:58 P.jiroveci:58

I7KFX6              	100.00%		L0PFK1              	100.00%
Bootstrap support for I7KFX6 as seed ortholog is 100%.
Bootstrap support for L0PFK1 as seed ortholog is 100%.

Group of orthologs #503. Best score 58 bits
Score difference with first non-orthologous sequence - E.cuniculi:58 P.jiroveci:58

Q8SSF3              	100.00%		L0PG13              	100.00%
Bootstrap support for Q8SSF3 as seed ortholog is 100%.
Bootstrap support for L0PG13 as seed ortholog is 100%.

Group of orthologs #504. Best score 57 bits
Score difference with first non-orthologous sequence - E.cuniculi:57 P.jiroveci:57

Q8SRF9              	100.00%		L0PF33              	100.00%
                    	       		L0PAP9              	22.22%
Bootstrap support for Q8SRF9 as seed ortholog is 100%.
Bootstrap support for L0PF33 as seed ortholog is 100%.

Group of orthologs #505. Best score 57 bits
Score difference with first non-orthologous sequence - E.cuniculi:57 P.jiroveci:57

Q8SVV5              	100.00%		L0PGM7              	100.00%
                    	       		L0PGY6              	95.34%
Bootstrap support for Q8SVV5 as seed ortholog is 100%.
Bootstrap support for L0PGM7 as seed ortholog is 100%.

Group of orthologs #506. Best score 57 bits
Score difference with first non-orthologous sequence - E.cuniculi:57 P.jiroveci:57

Q8SRT5              	100.00%		L0PAB8              	100.00%
Bootstrap support for Q8SRT5 as seed ortholog is 100%.
Bootstrap support for L0PAB8 as seed ortholog is 100%.

Group of orthologs #507. Best score 57 bits
Score difference with first non-orthologous sequence - E.cuniculi:57 P.jiroveci:3

Q8SWJ3              	100.00%		L0PHH5              	100.00%
Bootstrap support for Q8SWJ3 as seed ortholog is 100%.
Bootstrap support for L0PHH5 as seed ortholog is 59%.
Alternative seed ortholog is L0PCB1 (3 bits away from this cluster)

Group of orthologs #508. Best score 56 bits
Score difference with first non-orthologous sequence - E.cuniculi:56 P.jiroveci:56

Q8SVQ1              	100.00%		L0P895              	100.00%
Bootstrap support for Q8SVQ1 as seed ortholog is 100%.
Bootstrap support for L0P895 as seed ortholog is 100%.

Group of orthologs #509. Best score 56 bits
Score difference with first non-orthologous sequence - E.cuniculi:56 P.jiroveci:56

Q8SV82              	100.00%		L0P9W9              	100.00%
Bootstrap support for Q8SV82 as seed ortholog is 100%.
Bootstrap support for L0P9W9 as seed ortholog is 100%.

Group of orthologs #510. Best score 56 bits
Score difference with first non-orthologous sequence - E.cuniculi:56 P.jiroveci:56

Q8SWH1              	100.00%		L0PFW4              	100.00%
Bootstrap support for Q8SWH1 as seed ortholog is 100%.
Bootstrap support for L0PFW4 as seed ortholog is 100%.

Group of orthologs #511. Best score 56 bits
Score difference with first non-orthologous sequence - E.cuniculi:4 P.jiroveci:56

Q8SW16              	100.00%		L0PHN0              	100.00%
Bootstrap support for Q8SW16 as seed ortholog is 48%.
Alternative seed ortholog is Q8SVZ6 (4 bits away from this cluster)
Bootstrap support for L0PHN0 as seed ortholog is 100%.

Group of orthologs #512. Best score 55 bits
Score difference with first non-orthologous sequence - E.cuniculi:55 P.jiroveci:55

Q8SRR4              	100.00%		L0PAB2              	100.00%
Bootstrap support for Q8SRR4 as seed ortholog is 100%.
Bootstrap support for L0PAB2 as seed ortholog is 100%.

Group of orthologs #513. Best score 55 bits
Score difference with first non-orthologous sequence - E.cuniculi:55 P.jiroveci:55

Q8SWB5              	100.00%		L0PAA1              	100.00%
Bootstrap support for Q8SWB5 as seed ortholog is 100%.
Bootstrap support for L0PAA1 as seed ortholog is 100%.

Group of orthologs #514. Best score 54 bits
Score difference with first non-orthologous sequence - E.cuniculi:54 P.jiroveci:54

Q8SUR0              	100.00%		L0P8Z8              	100.00%
                    	       		L0PFN6              	100.00%
Bootstrap support for Q8SUR0 as seed ortholog is 100%.
Bootstrap support for L0P8Z8 as seed ortholog is 100%.
Bootstrap support for L0PFN6 as seed ortholog is 100%.

Group of orthologs #515. Best score 54 bits
Score difference with first non-orthologous sequence - E.cuniculi:54 P.jiroveci:54

Q8SSI6              	100.00%		L0PE37              	100.00%
Bootstrap support for Q8SSI6 as seed ortholog is 100%.
Bootstrap support for L0PE37 as seed ortholog is 100%.

Group of orthologs #516. Best score 54 bits
Score difference with first non-orthologous sequence - E.cuniculi:54 P.jiroveci:54

Q8SWE3              	100.00%		L0PD96              	100.00%
Bootstrap support for Q8SWE3 as seed ortholog is 100%.
Bootstrap support for L0PD96 as seed ortholog is 100%.

Group of orthologs #517. Best score 53 bits
Score difference with first non-orthologous sequence - E.cuniculi:53 P.jiroveci:53

Q8SVU7              	100.00%		L0PAW7              	100.00%
Bootstrap support for Q8SVU7 as seed ortholog is 100%.
Bootstrap support for L0PAW7 as seed ortholog is 100%.

Group of orthologs #518. Best score 52 bits
Score difference with first non-orthologous sequence - E.cuniculi:52 P.jiroveci:52

Q8SSA2              	100.00%		L0PCQ4              	100.00%
Bootstrap support for Q8SSA2 as seed ortholog is 100%.
Bootstrap support for L0PCQ4 as seed ortholog is 100%.

Group of orthologs #519. Best score 52 bits
Score difference with first non-orthologous sequence - E.cuniculi:52 P.jiroveci:52

Q8SUU9              	100.00%		L0PHJ3              	100.00%
Bootstrap support for Q8SUU9 as seed ortholog is 100%.
Bootstrap support for L0PHJ3 as seed ortholog is 100%.

Group of orthologs #520. Best score 51 bits
Score difference with first non-orthologous sequence - E.cuniculi:51 P.jiroveci:51

Q8SQK1              	100.00%		L0P9A1              	100.00%
Bootstrap support for Q8SQK1 as seed ortholog is 100%.
Bootstrap support for L0P9A1 as seed ortholog is 100%.

Group of orthologs #521. Best score 51 bits
Score difference with first non-orthologous sequence - E.cuniculi:51 P.jiroveci:51

Q8SS46              	100.00%		L0PFA1              	100.00%
Bootstrap support for Q8SS46 as seed ortholog is 100%.
Bootstrap support for L0PFA1 as seed ortholog is 100%.

Group of orthologs #522. Best score 51 bits
Score difference with first non-orthologous sequence - E.cuniculi:51 P.jiroveci:51

Q8SVZ0              	100.00%		L0PD23              	100.00%
Bootstrap support for Q8SVZ0 as seed ortholog is 100%.
Bootstrap support for L0PD23 as seed ortholog is 100%.

Group of orthologs #523. Best score 51 bits
Score difference with first non-orthologous sequence - E.cuniculi:51 P.jiroveci:51

Q8SWN2              	100.00%		L0PFW7              	100.00%
Bootstrap support for Q8SWN2 as seed ortholog is 100%.
Bootstrap support for L0PFW7 as seed ortholog is 100%.

Group of orthologs #524. Best score 50 bits
Score difference with first non-orthologous sequence - E.cuniculi:50 P.jiroveci:50

Q8SSG3              	100.00%		L0PAY4              	100.00%
                    	       		L0P8R4              	20.77%
Bootstrap support for Q8SSG3 as seed ortholog is 100%.
Bootstrap support for L0PAY4 as seed ortholog is 100%.

Group of orthologs #525. Best score 50 bits
Score difference with first non-orthologous sequence - E.cuniculi:50 P.jiroveci:50

Q8SQM2              	100.00%		L0P8G4              	100.00%
Bootstrap support for Q8SQM2 as seed ortholog is 100%.
Bootstrap support for L0P8G4 as seed ortholog is 100%.

Group of orthologs #526. Best score 50 bits
Score difference with first non-orthologous sequence - E.cuniculi:50 P.jiroveci:50

Q8SVK9              	100.00%		L0P887              	100.00%
Bootstrap support for Q8SVK9 as seed ortholog is 100%.
Bootstrap support for L0P887 as seed ortholog is 100%.

Group of orthologs #527. Best score 50 bits
Score difference with first non-orthologous sequence - E.cuniculi:50 P.jiroveci:50

Q8SSG1              	100.00%		L0PDG4              	100.00%
Bootstrap support for Q8SSG1 as seed ortholog is 100%.
Bootstrap support for L0PDG4 as seed ortholog is 100%.

Group of orthologs #528. Best score 49 bits
Score difference with first non-orthologous sequence - E.cuniculi:49 P.jiroveci:49

Q8SR64              	100.00%		L0P8K8              	100.00%
Bootstrap support for Q8SR64 as seed ortholog is 100%.
Bootstrap support for L0P8K8 as seed ortholog is 100%.

Group of orthologs #529. Best score 49 bits
Score difference with first non-orthologous sequence - E.cuniculi:49 P.jiroveci:49

Q8SR05              	100.00%		L0PGH5              	100.00%
Bootstrap support for Q8SR05 as seed ortholog is 100%.
Bootstrap support for L0PGH5 as seed ortholog is 100%.

Group of orthologs #530. Best score 48 bits
Score difference with first non-orthologous sequence - E.cuniculi:48 P.jiroveci:48

Q8SUN7              	100.00%		L0PFD5              	100.00%
Q8SUN8              	23.72%		
Bootstrap support for Q8SUN7 as seed ortholog is 100%.
Bootstrap support for L0PFD5 as seed ortholog is 100%.

Group of orthologs #531. Best score 48 bits
Score difference with first non-orthologous sequence - E.cuniculi:48 P.jiroveci:48

Q8SQX6              	100.00%		L0P9N4              	100.00%
Bootstrap support for Q8SQX6 as seed ortholog is 100%.
Bootstrap support for L0P9N4 as seed ortholog is 100%.

Group of orthologs #532. Best score 48 bits
Score difference with first non-orthologous sequence - E.cuniculi:48 P.jiroveci:48

Q8STZ6              	100.00%		L0P9U1              	100.00%
Bootstrap support for Q8STZ6 as seed ortholog is 100%.
Bootstrap support for L0P9U1 as seed ortholog is 100%.

Group of orthologs #533. Best score 48 bits
Score difference with first non-orthologous sequence - E.cuniculi:48 P.jiroveci:48

Q8SW66              	100.00%		L0PE85              	100.00%
Bootstrap support for Q8SW66 as seed ortholog is 100%.
Bootstrap support for L0PE85 as seed ortholog is 100%.

Group of orthologs #534. Best score 48 bits
Score difference with first non-orthologous sequence - E.cuniculi:48 P.jiroveci:48

Q8SW89              	100.00%		L0PFA9              	100.00%
Bootstrap support for Q8SW89 as seed ortholog is 100%.
Bootstrap support for L0PFA9 as seed ortholog is 100%.

Group of orthologs #535. Best score 47 bits
Score difference with first non-orthologous sequence - E.cuniculi:47 P.jiroveci:47

Q8SRK5              	100.00%		L0PB42              	100.00%
Bootstrap support for Q8SRK5 as seed ortholog is 100%.
Bootstrap support for L0PB42 as seed ortholog is 100%.

Group of orthologs #536. Best score 47 bits
Score difference with first non-orthologous sequence - E.cuniculi:47 P.jiroveci:47

Q8SRX2              	100.00%		L0PBU1              	100.00%
Bootstrap support for Q8SRX2 as seed ortholog is 100%.
Bootstrap support for L0PBU1 as seed ortholog is 100%.

Group of orthologs #537. Best score 46 bits
Score difference with first non-orthologous sequence - E.cuniculi:46 P.jiroveci:46

Q8SS49              	100.00%		L0PCZ2              	100.00%
Bootstrap support for Q8SS49 as seed ortholog is 100%.
Bootstrap support for L0PCZ2 as seed ortholog is 100%.

Group of orthologs #538. Best score 46 bits
Score difference with first non-orthologous sequence - E.cuniculi:46 P.jiroveci:46

Q8SWC3              	100.00%		L0PE10              	100.00%
Bootstrap support for Q8SWC3 as seed ortholog is 100%.
Bootstrap support for L0PE10 as seed ortholog is 100%.

Group of orthologs #539. Best score 45 bits
Score difference with first non-orthologous sequence - E.cuniculi:45 P.jiroveci:45

Q8SRP1              	100.00%		L0P9F1              	100.00%
Bootstrap support for Q8SRP1 as seed ortholog is 100%.
Bootstrap support for L0P9F1 as seed ortholog is 100%.

Group of orthologs #540. Best score 45 bits
Score difference with first non-orthologous sequence - E.cuniculi:45 P.jiroveci:45

I7JU03              	100.00%		L0PCR3              	100.00%
Bootstrap support for I7JU03 as seed ortholog is 100%.
Bootstrap support for L0PCR3 as seed ortholog is 100%.

Group of orthologs #541. Best score 45 bits
Score difference with first non-orthologous sequence - E.cuniculi:45 P.jiroveci:45

I7KFY8              	100.00%		L0PD94              	100.00%
Bootstrap support for I7KFY8 as seed ortholog is 100%.
Bootstrap support for L0PD94 as seed ortholog is 100%.

Group of orthologs #542. Best score 45 bits
Score difference with first non-orthologous sequence - E.cuniculi:45 P.jiroveci:45

Q8SVR4              	100.00%		L0PEU8              	100.00%
Bootstrap support for Q8SVR4 as seed ortholog is 100%.
Bootstrap support for L0PEU8 as seed ortholog is 100%.

Group of orthologs #543. Best score 44 bits
Score difference with first non-orthologous sequence - E.cuniculi:44 P.jiroveci:44

Q8SRW7              	100.00%		L0PCQ5              	100.00%
                    	       		L0PD19              	13.33%
Bootstrap support for Q8SRW7 as seed ortholog is 100%.
Bootstrap support for L0PCQ5 as seed ortholog is 100%.

Group of orthologs #544. Best score 44 bits
Score difference with first non-orthologous sequence - E.cuniculi:44 P.jiroveci:44

Q8SUU2              	100.00%		L0PCY1              	100.00%
Q8STI4              	100.00%		
Bootstrap support for Q8SUU2 as seed ortholog is 100%.
Bootstrap support for Q8STI4 as seed ortholog is 100%.
Bootstrap support for L0PCY1 as seed ortholog is 100%.

Group of orthologs #545. Best score 44 bits
Score difference with first non-orthologous sequence - E.cuniculi:3 P.jiroveci:44

Q8SUM8              	100.00%		L0PA37              	100.00%
Bootstrap support for Q8SUM8 as seed ortholog is 54%.
Alternative seed ortholog is Q8SQL7 (3 bits away from this cluster)
Bootstrap support for L0PA37 as seed ortholog is 100%.

Group of orthologs #546. Best score 44 bits
Score difference with first non-orthologous sequence - E.cuniculi:44 P.jiroveci:44

Q8SS66              	100.00%		L0PG65              	100.00%
Bootstrap support for Q8SS66 as seed ortholog is 100%.
Bootstrap support for L0PG65 as seed ortholog is 100%.