###################################
131 groups of orthologs
160 in-paralogs from E.cuniculi
145 in-paralogs from L.interrogans
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 596 bits
Score difference with first non-orthologous sequence - E.cuniculi:523 L.interrogans:506

Q8SS27              	100.00%		Q8EZT8              	100.00%
Bootstrap support for Q8SS27 as seed ortholog is 100%.
Bootstrap support for Q8EZT8 as seed ortholog is 100%.

Group of orthologs #2. Best score 570 bits
Score difference with first non-orthologous sequence - E.cuniculi:570 L.interrogans:570

Q8SQU0              	100.00%		Q8F509              	100.00%
Bootstrap support for Q8SQU0 as seed ortholog is 100%.
Bootstrap support for Q8F509 as seed ortholog is 100%.

Group of orthologs #3. Best score 549 bits
Score difference with first non-orthologous sequence - E.cuniculi:210 L.interrogans:500

O96772              	100.00%		P61443              	100.00%
Bootstrap support for O96772 as seed ortholog is 99%.
Bootstrap support for P61443 as seed ortholog is 100%.

Group of orthologs #4. Best score 487 bits
Score difference with first non-orthologous sequence - E.cuniculi:487 L.interrogans:355

Q8SRZ9              	100.00%		Q8EYG2              	100.00%
Bootstrap support for Q8SRZ9 as seed ortholog is 100%.
Bootstrap support for Q8EYG2 as seed ortholog is 100%.

Group of orthologs #5. Best score 472 bits
Score difference with first non-orthologous sequence - E.cuniculi:472 L.interrogans:472

Q8SRH2              	100.00%		Q8F6R1              	100.00%
Bootstrap support for Q8SRH2 as seed ortholog is 100%.
Bootstrap support for Q8F6R1 as seed ortholog is 100%.

Group of orthologs #6. Best score 368 bits
Score difference with first non-orthologous sequence - E.cuniculi:297 L.interrogans:241

Q8SS56              	100.00%		Q8F4P5              	100.00%
Bootstrap support for Q8SS56 as seed ortholog is 100%.
Bootstrap support for Q8F4P5 as seed ortholog is 100%.

Group of orthologs #7. Best score 363 bits
Score difference with first non-orthologous sequence - E.cuniculi:363 L.interrogans:363

Q8SSD4              	100.00%		Q8F0T4              	100.00%
Bootstrap support for Q8SSD4 as seed ortholog is 100%.
Bootstrap support for Q8F0T4 as seed ortholog is 100%.

Group of orthologs #8. Best score 363 bits
Score difference with first non-orthologous sequence - E.cuniculi:363 L.interrogans:363

Q8SQI7              	100.00%		Q8F3J3              	100.00%
Bootstrap support for Q8SQI7 as seed ortholog is 100%.
Bootstrap support for Q8F3J3 as seed ortholog is 100%.

Group of orthologs #9. Best score 360 bits
Score difference with first non-orthologous sequence - E.cuniculi:360 L.interrogans:360

Q8SRI2              	100.00%		Q8EZQ1              	100.00%
Bootstrap support for Q8SRI2 as seed ortholog is 100%.
Bootstrap support for Q8EZQ1 as seed ortholog is 100%.

Group of orthologs #10. Best score 299 bits
Score difference with first non-orthologous sequence - E.cuniculi:299 L.interrogans:299

Q8SRJ8              	100.00%		Q8F5H7              	100.00%
Bootstrap support for Q8SRJ8 as seed ortholog is 100%.
Bootstrap support for Q8F5H7 as seed ortholog is 100%.

Group of orthologs #11. Best score 296 bits
Score difference with first non-orthologous sequence - E.cuniculi:296 L.interrogans:240

Q8SS26              	100.00%		Q8F4N1              	100.00%
Bootstrap support for Q8SS26 as seed ortholog is 100%.
Bootstrap support for Q8F4N1 as seed ortholog is 100%.

Group of orthologs #12. Best score 294 bits
Score difference with first non-orthologous sequence - E.cuniculi:294 L.interrogans:294

Q8SSC4              	100.00%		Q8F0S3              	100.00%
Q8SRM3              	13.53%		
Q8SS15              	8.86%		
Bootstrap support for Q8SSC4 as seed ortholog is 100%.
Bootstrap support for Q8F0S3 as seed ortholog is 100%.

Group of orthologs #13. Best score 291 bits
Score difference with first non-orthologous sequence - E.cuniculi:291 L.interrogans:291

Q8SSK1              	100.00%		Q8F4B2              	100.00%
Bootstrap support for Q8SSK1 as seed ortholog is 100%.
Bootstrap support for Q8F4B2 as seed ortholog is 100%.

Group of orthologs #14. Best score 280 bits
Score difference with first non-orthologous sequence - E.cuniculi:280 L.interrogans:169

Q8SQV6              	100.00%		Q8F6I1              	100.00%
Bootstrap support for Q8SQV6 as seed ortholog is 100%.
Bootstrap support for Q8F6I1 as seed ortholog is 99%.

Group of orthologs #15. Best score 279 bits
Score difference with first non-orthologous sequence - E.cuniculi:279 L.interrogans:279

Q8SR75              	100.00%		Q8F0S2              	100.00%
Q8SQY8              	21.37%		
Q8SSB7              	5.23%		
Bootstrap support for Q8SR75 as seed ortholog is 100%.
Bootstrap support for Q8F0S2 as seed ortholog is 100%.

Group of orthologs #16. Best score 278 bits
Score difference with first non-orthologous sequence - E.cuniculi:278 L.interrogans:278

O62585              	100.00%		Q8F6A0              	100.00%
Bootstrap support for O62585 as seed ortholog is 100%.
Bootstrap support for Q8F6A0 as seed ortholog is 100%.

Group of orthologs #17. Best score 272 bits
Score difference with first non-orthologous sequence - E.cuniculi:272 L.interrogans:272

Q8SSC5              	100.00%		Q8EXF1              	100.00%
Bootstrap support for Q8SSC5 as seed ortholog is 100%.
Bootstrap support for Q8EXF1 as seed ortholog is 100%.

Group of orthologs #18. Best score 272 bits
Score difference with first non-orthologous sequence - E.cuniculi:272 L.interrogans:272

Q8SRN9              	100.00%		Q8F3S1              	100.00%
Bootstrap support for Q8SRN9 as seed ortholog is 100%.
Bootstrap support for Q8F3S1 as seed ortholog is 100%.

Group of orthologs #19. Best score 270 bits
Score difference with first non-orthologous sequence - E.cuniculi:122 L.interrogans:270

Q8SR47              	100.00%		Q8F496              	100.00%
Bootstrap support for Q8SR47 as seed ortholog is 99%.
Bootstrap support for Q8F496 as seed ortholog is 100%.

Group of orthologs #20. Best score 268 bits
Score difference with first non-orthologous sequence - E.cuniculi:199 L.interrogans:268

Q8SRI7              	100.00%		Q8F8D2              	100.00%
Bootstrap support for Q8SRI7 as seed ortholog is 99%.
Bootstrap support for Q8F8D2 as seed ortholog is 100%.

Group of orthologs #21. Best score 265 bits
Score difference with first non-orthologous sequence - E.cuniculi:265 L.interrogans:265

Q8SUA4              	100.00%		Q8F4T8              	100.00%
Bootstrap support for Q8SUA4 as seed ortholog is 100%.
Bootstrap support for Q8F4T8 as seed ortholog is 100%.

Group of orthologs #22. Best score 250 bits
Score difference with first non-orthologous sequence - E.cuniculi:250 L.interrogans:250

Q8SRE0              	100.00%		Q8F525              	100.00%
Bootstrap support for Q8SRE0 as seed ortholog is 100%.
Bootstrap support for Q8F525 as seed ortholog is 100%.

Group of orthologs #23. Best score 248 bits
Score difference with first non-orthologous sequence - E.cuniculi:248 L.interrogans:248

Q8SQZ6              	100.00%		Q8F6C0              	100.00%
Bootstrap support for Q8SQZ6 as seed ortholog is 100%.
Bootstrap support for Q8F6C0 as seed ortholog is 100%.

Group of orthologs #24. Best score 247 bits
Score difference with first non-orthologous sequence - E.cuniculi:247 L.interrogans:247

Q8SQZ7              	100.00%		Q8F0Q1              	100.00%
Bootstrap support for Q8SQZ7 as seed ortholog is 100%.
Bootstrap support for Q8F0Q1 as seed ortholog is 100%.

Group of orthologs #25. Best score 247 bits
Score difference with first non-orthologous sequence - E.cuniculi:247 L.interrogans:247

Q8SSF2              	100.00%		Q8F3B3              	100.00%
Bootstrap support for Q8SSF2 as seed ortholog is 100%.
Bootstrap support for Q8F3B3 as seed ortholog is 100%.

Group of orthologs #26. Best score 240 bits
Score difference with first non-orthologous sequence - E.cuniculi:240 L.interrogans:240

Q8SQP0              	100.00%		Q8EX62              	100.00%
Bootstrap support for Q8SQP0 as seed ortholog is 100%.
Bootstrap support for Q8EX62 as seed ortholog is 100%.

Group of orthologs #27. Best score 225 bits
Score difference with first non-orthologous sequence - E.cuniculi:1 L.interrogans:225

Q8SRB2              	100.00%		Q8F0Q7              	100.00%
Bootstrap support for Q8SRB2 as seed ortholog is 50%.
Alternative seed ortholog is Q8SR63 (1 bits away from this cluster)
Bootstrap support for Q8F0Q7 as seed ortholog is 100%.

Group of orthologs #28. Best score 219 bits
Score difference with first non-orthologous sequence - E.cuniculi:146 L.interrogans:219

Q8SQW5              	100.00%		Q8EZD6              	100.00%
Bootstrap support for Q8SQW5 as seed ortholog is 99%.
Bootstrap support for Q8EZD6 as seed ortholog is 100%.

Group of orthologs #29. Best score 209 bits
Score difference with first non-orthologous sequence - E.cuniculi:209 L.interrogans:209

Q8SRV2              	100.00%		Q8F4D6              	100.00%
Bootstrap support for Q8SRV2 as seed ortholog is 100%.
Bootstrap support for Q8F4D6 as seed ortholog is 100%.

Group of orthologs #30. Best score 208 bits
Score difference with first non-orthologous sequence - E.cuniculi:69 L.interrogans:107

Q8SQK8              	100.00%		Q8F522              	100.00%
Bootstrap support for Q8SQK8 as seed ortholog is 93%.
Bootstrap support for Q8F522 as seed ortholog is 99%.

Group of orthologs #31. Best score 207 bits
Score difference with first non-orthologous sequence - E.cuniculi:142 L.interrogans:207

Q8SRV5              	100.00%		Q8F8V2              	100.00%
Bootstrap support for Q8SRV5 as seed ortholog is 99%.
Bootstrap support for Q8F8V2 as seed ortholog is 100%.

Group of orthologs #32. Best score 204 bits
Score difference with first non-orthologous sequence - E.cuniculi:204 L.interrogans:204

Q8SS48              	100.00%		Q8EY78              	100.00%
Bootstrap support for Q8SS48 as seed ortholog is 100%.
Bootstrap support for Q8EY78 as seed ortholog is 100%.

Group of orthologs #33. Best score 193 bits
Score difference with first non-orthologous sequence - E.cuniculi:193 L.interrogans:193

Q8SR33              	100.00%		P59173              	100.00%
Bootstrap support for Q8SR33 as seed ortholog is 100%.
Bootstrap support for P59173 as seed ortholog is 100%.

Group of orthologs #34. Best score 193 bits
Score difference with first non-orthologous sequence - E.cuniculi:193 L.interrogans:193

Q8SRZ8              	100.00%		Q8F5H8              	100.00%
Bootstrap support for Q8SRZ8 as seed ortholog is 100%.
Bootstrap support for Q8F5H8 as seed ortholog is 100%.

Group of orthologs #35. Best score 191 bits
Score difference with first non-orthologous sequence - E.cuniculi:191 L.interrogans:191

Q8SRS7              	100.00%		Q8CXS3              	100.00%
Bootstrap support for Q8SRS7 as seed ortholog is 100%.
Bootstrap support for Q8CXS3 as seed ortholog is 100%.

Group of orthologs #36. Best score 184 bits
Score difference with first non-orthologous sequence - E.cuniculi:184 L.interrogans:41

Q8SQT7              	100.00%		Q8F983              	100.00%
Bootstrap support for Q8SQT7 as seed ortholog is 100%.
Bootstrap support for Q8F983 as seed ortholog is 81%.

Group of orthologs #37. Best score 180 bits
Score difference with first non-orthologous sequence - E.cuniculi:180 L.interrogans:180

Q8SQM8              	100.00%		Q8F4N0              	100.00%
Bootstrap support for Q8SQM8 as seed ortholog is 100%.
Bootstrap support for Q8F4N0 as seed ortholog is 100%.

Group of orthologs #38. Best score 175 bits
Score difference with first non-orthologous sequence - E.cuniculi:175 L.interrogans:175

Q8SSK6              	100.00%		Q8F1G4              	100.00%
Bootstrap support for Q8SSK6 as seed ortholog is 100%.
Bootstrap support for Q8F1G4 as seed ortholog is 100%.

Group of orthologs #39. Best score 175 bits
Score difference with first non-orthologous sequence - E.cuniculi:175 L.interrogans:175

Q8SVN8              	100.00%		Q8F2D9              	100.00%
Bootstrap support for Q8SVN8 as seed ortholog is 100%.
Bootstrap support for Q8F2D9 as seed ortholog is 100%.

Group of orthologs #40. Best score 171 bits
Score difference with first non-orthologous sequence - E.cuniculi:171 L.interrogans:171

Q8SR38              	100.00%		Q8F9T4              	100.00%
Q8SR39              	100.00%		
Bootstrap support for Q8SR38 as seed ortholog is 100%.
Bootstrap support for Q8SR39 as seed ortholog is 100%.
Bootstrap support for Q8F9T4 as seed ortholog is 100%.

Group of orthologs #41. Best score 171 bits
Score difference with first non-orthologous sequence - E.cuniculi:171 L.interrogans:61

Q8SSE8              	100.00%		Q8EXZ9              	100.00%
Bootstrap support for Q8SSE8 as seed ortholog is 100%.
Bootstrap support for Q8EXZ9 as seed ortholog is 83%.

Group of orthologs #42. Best score 170 bits
Score difference with first non-orthologous sequence - E.cuniculi:170 L.interrogans:170

Q8SR40              	100.00%		Q8F3Y8              	100.00%
Bootstrap support for Q8SR40 as seed ortholog is 100%.
Bootstrap support for Q8F3Y8 as seed ortholog is 100%.

Group of orthologs #43. Best score 160 bits
Score difference with first non-orthologous sequence - E.cuniculi:160 L.interrogans:160

Q8SUY1              	100.00%		Q8F0E1              	100.00%
Bootstrap support for Q8SUY1 as seed ortholog is 100%.
Bootstrap support for Q8F0E1 as seed ortholog is 100%.

Group of orthologs #44. Best score 158 bits
Score difference with first non-orthologous sequence - E.cuniculi:49 L.interrogans:158

Q8SUC5              	100.00%		Q8EZ25              	100.00%
Q8SQJ7              	14.32%		
Q8SQP6              	6.36%		
Bootstrap support for Q8SUC5 as seed ortholog is 83%.
Bootstrap support for Q8EZ25 as seed ortholog is 100%.

Group of orthologs #45. Best score 154 bits
Score difference with first non-orthologous sequence - E.cuniculi:37 L.interrogans:154

Q8SQJ6              	100.00%		Q7ZAM9              	100.00%
Bootstrap support for Q8SQJ6 as seed ortholog is 23%.
Alternative seed ortholog is Q8SS38 (37 bits away from this cluster)
Bootstrap support for Q7ZAM9 as seed ortholog is 100%.

Group of orthologs #46. Best score 153 bits
Score difference with first non-orthologous sequence - E.cuniculi:101 L.interrogans:37

Q8STX6              	100.00%		Q8F213              	100.00%
                    	       		Q8F118              	46.54%
                    	       		Q8F3F8              	43.30%
                    	       		Q8F212              	41.24%
                    	       		Q8F3F6              	40.94%
                    	       		Q8F7S1              	36.97%
                    	       		Q8F3F9              	35.05%
                    	       		Q8F119              	31.66%
                    	       		Q8F115              	28.28%
                    	       		Q8F3G3              	23.42%
                    	       		Q8F116              	22.53%
                    	       		Q8F117              	21.21%
                    	       		Q8F2B3              	10.60%
Bootstrap support for Q8STX6 as seed ortholog is 99%.
Bootstrap support for Q8F213 as seed ortholog is 70%.
Alternative seed ortholog is Q8F3F4 (37 bits away from this cluster)

Group of orthologs #47. Best score 153 bits
Score difference with first non-orthologous sequence - E.cuniculi:153 L.interrogans:153

Q8SQT3              	100.00%		Q8F433              	100.00%
Bootstrap support for Q8SQT3 as seed ortholog is 100%.
Bootstrap support for Q8F433 as seed ortholog is 100%.

Group of orthologs #48. Best score 153 bits
Score difference with first non-orthologous sequence - E.cuniculi:54 L.interrogans:153

Q8SS00              	100.00%		Q8F6X4              	100.00%
Bootstrap support for Q8SS00 as seed ortholog is 75%.
Bootstrap support for Q8F6X4 as seed ortholog is 100%.

Group of orthologs #49. Best score 152 bits
Score difference with first non-orthologous sequence - E.cuniculi:152 L.interrogans:152

Q8SR02              	100.00%		Q8F4E3              	100.00%
Q8SVI3              	100.00%		
Bootstrap support for Q8SR02 as seed ortholog is 100%.
Bootstrap support for Q8SVI3 as seed ortholog is 100%.
Bootstrap support for Q8F4E3 as seed ortholog is 100%.

Group of orthologs #50. Best score 148 bits
Score difference with first non-orthologous sequence - E.cuniculi:148 L.interrogans:148

Q8SW65              	100.00%		Q8F491              	100.00%
Bootstrap support for Q8SW65 as seed ortholog is 100%.
Bootstrap support for Q8F491 as seed ortholog is 100%.

Group of orthologs #51. Best score 145 bits
Score difference with first non-orthologous sequence - E.cuniculi:24 L.interrogans:145

Q8SQV2              	100.00%		Q8F3R3              	100.00%
Bootstrap support for Q8SQV2 as seed ortholog is 79%.
Bootstrap support for Q8F3R3 as seed ortholog is 100%.

Group of orthologs #52. Best score 141 bits
Score difference with first non-orthologous sequence - E.cuniculi:141 L.interrogans:141

Q8SQV1              	100.00%		Q8F5R7              	100.00%
Q8SR22              	100.00%		Q8F003              	100.00%
Q8SSC7              	11.81%		
Q8SS58              	10.91%		
Bootstrap support for Q8SQV1 as seed ortholog is 100%.
Bootstrap support for Q8SR22 as seed ortholog is 100%.
Bootstrap support for Q8F5R7 as seed ortholog is 100%.
Bootstrap support for Q8F003 as seed ortholog is 100%.

Group of orthologs #53. Best score 140 bits
Score difference with first non-orthologous sequence - E.cuniculi:140 L.interrogans:140

Q8STM6              	100.00%		Q8F438              	100.00%
Bootstrap support for Q8STM6 as seed ortholog is 100%.
Bootstrap support for Q8F438 as seed ortholog is 100%.

Group of orthologs #54. Best score 140 bits
Score difference with first non-orthologous sequence - E.cuniculi:58 L.interrogans:140

Q8SS29              	100.00%		Q9XD38              	100.00%
Bootstrap support for Q8SS29 as seed ortholog is 91%.
Bootstrap support for Q9XD38 as seed ortholog is 100%.

Group of orthologs #55. Best score 137 bits
Score difference with first non-orthologous sequence - E.cuniculi:137 L.interrogans:137

Q8SS63              	100.00%		Q8EYL9              	100.00%
Bootstrap support for Q8SS63 as seed ortholog is 100%.
Bootstrap support for Q8EYL9 as seed ortholog is 100%.

Group of orthologs #56. Best score 137 bits
Score difference with first non-orthologous sequence - E.cuniculi:137 L.interrogans:137

Q8SUV4              	100.00%		Q8FA29              	100.00%
Bootstrap support for Q8SUV4 as seed ortholog is 100%.
Bootstrap support for Q8FA29 as seed ortholog is 100%.

Group of orthologs #57. Best score 135 bits
Score difference with first non-orthologous sequence - E.cuniculi:135 L.interrogans:135

Q8SQZ1              	100.00%		Q8F5I5              	100.00%
Bootstrap support for Q8SQZ1 as seed ortholog is 100%.
Bootstrap support for Q8F5I5 as seed ortholog is 100%.

Group of orthologs #58. Best score 133 bits
Score difference with first non-orthologous sequence - E.cuniculi:133 L.interrogans:133

Q8SS85              	100.00%		Q8F2G2              	100.00%
Bootstrap support for Q8SS85 as seed ortholog is 100%.
Bootstrap support for Q8F2G2 as seed ortholog is 100%.

Group of orthologs #59. Best score 130 bits
Score difference with first non-orthologous sequence - E.cuniculi:130 L.interrogans:130

Q8SVA6              	100.00%		Q8F7W4              	100.00%
Bootstrap support for Q8SVA6 as seed ortholog is 100%.
Bootstrap support for Q8F7W4 as seed ortholog is 100%.

Group of orthologs #60. Best score 127 bits
Score difference with first non-orthologous sequence - E.cuniculi:127 L.interrogans:127

Q8SRK0              	100.00%		P61441              	100.00%
Bootstrap support for Q8SRK0 as seed ortholog is 100%.
Bootstrap support for P61441 as seed ortholog is 100%.

Group of orthologs #61. Best score 126 bits
Score difference with first non-orthologous sequence - E.cuniculi:13 L.interrogans:19

Q8SR34              	100.00%		Q8F2J5              	100.00%
Bootstrap support for Q8SR34 as seed ortholog is 63%.
Alternative seed ortholog is Q8SQU9 (13 bits away from this cluster)
Bootstrap support for Q8F2J5 as seed ortholog is 69%.
Alternative seed ortholog is Q8F2J2 (19 bits away from this cluster)

Group of orthologs #62. Best score 124 bits
Score difference with first non-orthologous sequence - E.cuniculi:124 L.interrogans:124

Q8SRN3              	100.00%		Q8EYJ5              	100.00%
Bootstrap support for Q8SRN3 as seed ortholog is 100%.
Bootstrap support for Q8EYJ5 as seed ortholog is 100%.

Group of orthologs #63. Best score 123 bits
Score difference with first non-orthologous sequence - E.cuniculi:123 L.interrogans:123

Q8SRH4              	100.00%		P59219              	100.00%
Q8SSI1              	5.75%		
Bootstrap support for Q8SRH4 as seed ortholog is 100%.
Bootstrap support for P59219 as seed ortholog is 100%.

Group of orthologs #64. Best score 120 bits
Score difference with first non-orthologous sequence - E.cuniculi:120 L.interrogans:120

Q8SS83              	100.00%		Q8F6P4              	100.00%
Bootstrap support for Q8SS83 as seed ortholog is 100%.
Bootstrap support for Q8F6P4 as seed ortholog is 100%.

Group of orthologs #65. Best score 119 bits
Score difference with first non-orthologous sequence - E.cuniculi:119 L.interrogans:119

Q8SVC2              	100.00%		Q9XD15              	100.00%
Bootstrap support for Q8SVC2 as seed ortholog is 100%.
Bootstrap support for Q9XD15 as seed ortholog is 100%.

Group of orthologs #66. Best score 118 bits
Score difference with first non-orthologous sequence - E.cuniculi:118 L.interrogans:118

Q8SQQ6              	100.00%		Q8F7K1              	100.00%
Bootstrap support for Q8SQQ6 as seed ortholog is 100%.
Bootstrap support for Q8F7K1 as seed ortholog is 100%.

Group of orthologs #67. Best score 116 bits
Score difference with first non-orthologous sequence - E.cuniculi:54 L.interrogans:72

Q8SRM0              	100.00%		Q8F4H4              	100.00%
Q8SQK0              	33.33%		
Q8SS82              	30.06%		
Q8SR13              	27.41%		
Q8SQI9              	27.26%		
Q8SRH0              	27.26%		
Q8SQV9              	6.07%		
Bootstrap support for Q8SRM0 as seed ortholog is 91%.
Bootstrap support for Q8F4H4 as seed ortholog is 98%.

Group of orthologs #68. Best score 115 bits
Score difference with first non-orthologous sequence - E.cuniculi:115 L.interrogans:19

Q8SQX7              	100.00%		Q8F5Q6              	100.00%
Bootstrap support for Q8SQX7 as seed ortholog is 100%.
Bootstrap support for Q8F5Q6 as seed ortholog is 73%.
Alternative seed ortholog is G1UB20 (19 bits away from this cluster)

Group of orthologs #69. Best score 114 bits
Score difference with first non-orthologous sequence - E.cuniculi:114 L.interrogans:67

Q8SRR3              	100.00%		Q8F9Y3              	100.00%
Bootstrap support for Q8SRR3 as seed ortholog is 100%.
Bootstrap support for Q8F9Y3 as seed ortholog is 94%.

Group of orthologs #70. Best score 113 bits
Score difference with first non-orthologous sequence - E.cuniculi:113 L.interrogans:113

Q8SQQ3              	100.00%		Q8F661              	100.00%
Bootstrap support for Q8SQQ3 as seed ortholog is 100%.
Bootstrap support for Q8F661 as seed ortholog is 100%.

Group of orthologs #71. Best score 112 bits
Score difference with first non-orthologous sequence - E.cuniculi:112 L.interrogans:112

Q8SRG9              	100.00%		Q8EYR3              	100.00%
Bootstrap support for Q8SRG9 as seed ortholog is 100%.
Bootstrap support for Q8EYR3 as seed ortholog is 100%.

Group of orthologs #72. Best score 109 bits
Score difference with first non-orthologous sequence - E.cuniculi:109 L.interrogans:16

Q8SRE1              	100.00%		Q8F4G4              	100.00%
Q8SQZ8              	7.63%		
Bootstrap support for Q8SRE1 as seed ortholog is 100%.
Bootstrap support for Q8F4G4 as seed ortholog is 65%.
Alternative seed ortholog is Q8F376 (16 bits away from this cluster)

Group of orthologs #73. Best score 109 bits
Score difference with first non-orthologous sequence - E.cuniculi:109 L.interrogans:109

Q8SS04              	100.00%		Q8EZB6              	100.00%
Bootstrap support for Q8SS04 as seed ortholog is 100%.
Bootstrap support for Q8EZB6 as seed ortholog is 100%.

Group of orthologs #74. Best score 107 bits
Score difference with first non-orthologous sequence - E.cuniculi:107 L.interrogans:51

Q8SV02              	100.00%		Q8F4T4              	100.00%
Bootstrap support for Q8SV02 as seed ortholog is 100%.
Bootstrap support for Q8F4T4 as seed ortholog is 93%.

Group of orthologs #75. Best score 106 bits
Score difference with first non-orthologous sequence - E.cuniculi:106 L.interrogans:2

Q8SQS2              	100.00%		Q8F3Y0              	100.00%
Bootstrap support for Q8SQS2 as seed ortholog is 100%.
Bootstrap support for Q8F3Y0 as seed ortholog is 53%.
Alternative seed ortholog is Q8F0D5 (2 bits away from this cluster)

Group of orthologs #76. Best score 106 bits
Score difference with first non-orthologous sequence - E.cuniculi:106 L.interrogans:106

Q8SRB8              	100.00%		Q8F482              	100.00%
Bootstrap support for Q8SRB8 as seed ortholog is 100%.
Bootstrap support for Q8F482 as seed ortholog is 100%.

Group of orthologs #77. Best score 105 bits
Score difference with first non-orthologous sequence - E.cuniculi:105 L.interrogans:105

Q8SS31              	100.00%		Q8F5G0              	100.00%
Bootstrap support for Q8SS31 as seed ortholog is 100%.
Bootstrap support for Q8F5G0 as seed ortholog is 100%.

Group of orthologs #78. Best score 98 bits
Score difference with first non-orthologous sequence - E.cuniculi:98 L.interrogans:98

Q8SRX7              	100.00%		Q8F4A1              	100.00%
Bootstrap support for Q8SRX7 as seed ortholog is 100%.
Bootstrap support for Q8F4A1 as seed ortholog is 100%.

Group of orthologs #79. Best score 94 bits
Score difference with first non-orthologous sequence - E.cuniculi:94 L.interrogans:94

Q8SS12              	100.00%		Q8F3A9              	100.00%
Bootstrap support for Q8SS12 as seed ortholog is 100%.
Bootstrap support for Q8F3A9 as seed ortholog is 100%.

Group of orthologs #80. Best score 93 bits
Score difference with first non-orthologous sequence - E.cuniculi:93 L.interrogans:93

Q8SVH1              	100.00%		Q8F4D2              	100.00%
Bootstrap support for Q8SVH1 as seed ortholog is 100%.
Bootstrap support for Q8F4D2 as seed ortholog is 100%.

Group of orthologs #81. Best score 92 bits
Score difference with first non-orthologous sequence - E.cuniculi:92 L.interrogans:92

Q8SQV8              	100.00%		Q8F3I9              	100.00%
Bootstrap support for Q8SQV8 as seed ortholog is 100%.
Bootstrap support for Q8F3I9 as seed ortholog is 100%.

Group of orthologs #82. Best score 90 bits
Score difference with first non-orthologous sequence - E.cuniculi:90 L.interrogans:90

Q8SQN9              	100.00%		Q8F7M9              	100.00%
Q8SS80              	35.67%		
Bootstrap support for Q8SQN9 as seed ortholog is 100%.
Bootstrap support for Q8F7M9 as seed ortholog is 100%.

Group of orthologs #83. Best score 89 bits
Score difference with first non-orthologous sequence - E.cuniculi:89 L.interrogans:44

Q8SQM0              	100.00%		Q8EY86              	100.00%
Bootstrap support for Q8SQM0 as seed ortholog is 100%.
Bootstrap support for Q8EY86 as seed ortholog is 92%.

Group of orthologs #84. Best score 89 bits
Score difference with first non-orthologous sequence - E.cuniculi:89 L.interrogans:89

Q8SRP6              	100.00%		Q8F3K8              	100.00%
Bootstrap support for Q8SRP6 as seed ortholog is 100%.
Bootstrap support for Q8F3K8 as seed ortholog is 100%.

Group of orthologs #85. Best score 88 bits
Score difference with first non-orthologous sequence - E.cuniculi:88 L.interrogans:88

Q8SRM7              	100.00%		Q8EYP5              	100.00%
Bootstrap support for Q8SRM7 as seed ortholog is 100%.
Bootstrap support for Q8EYP5 as seed ortholog is 100%.

Group of orthologs #86. Best score 86 bits
Score difference with first non-orthologous sequence - E.cuniculi:86 L.interrogans:86

Q8SRP9              	100.00%		P61439              	100.00%
Q8SR53              	15.10%		
Q8SSC9              	14.99%		
Q8SQP2              	14.78%		
Q8SR76              	12.57%		
Q8SSH3              	11.09%		
Bootstrap support for Q8SRP9 as seed ortholog is 100%.
Bootstrap support for P61439 as seed ortholog is 100%.

Group of orthologs #87. Best score 86 bits
Score difference with first non-orthologous sequence - E.cuniculi:86 L.interrogans:86

Q8SSD7              	100.00%		Q8F148              	100.00%
Bootstrap support for Q8SSD7 as seed ortholog is 100%.
Bootstrap support for Q8F148 as seed ortholog is 100%.

Group of orthologs #88. Best score 83 bits
Score difference with first non-orthologous sequence - E.cuniculi:39 L.interrogans:22

Q8SU39              	100.00%		Q8F7H4              	100.00%
                    	       		Q8EY23              	8.06%
Bootstrap support for Q8SU39 as seed ortholog is 90%.
Bootstrap support for Q8F7H4 as seed ortholog is 76%.

Group of orthologs #89. Best score 83 bits
Score difference with first non-orthologous sequence - E.cuniculi:83 L.interrogans:83

Q8SSH7              	100.00%		Q8F7D9              	100.00%
Bootstrap support for Q8SSH7 as seed ortholog is 100%.
Bootstrap support for Q8F7D9 as seed ortholog is 100%.

Group of orthologs #90. Best score 83 bits
Score difference with first non-orthologous sequence - E.cuniculi:83 L.interrogans:83

Q8SSM6              	100.00%		Q9XD33              	100.00%
Bootstrap support for Q8SSM6 as seed ortholog is 100%.
Bootstrap support for Q9XD33 as seed ortholog is 100%.

Group of orthologs #91. Best score 82 bits
Score difference with first non-orthologous sequence - E.cuniculi:82 L.interrogans:82

Q8SRY1              	100.00%		Q8EZG6              	100.00%
Bootstrap support for Q8SRY1 as seed ortholog is 100%.
Bootstrap support for Q8EZG6 as seed ortholog is 100%.

Group of orthologs #92. Best score 82 bits
Score difference with first non-orthologous sequence - E.cuniculi:82 L.interrogans:82

Q8SRD8              	100.00%		Q8F5J3              	100.00%
Bootstrap support for Q8SRD8 as seed ortholog is 100%.
Bootstrap support for Q8F5J3 as seed ortholog is 100%.

Group of orthologs #93. Best score 80 bits
Score difference with first non-orthologous sequence - E.cuniculi:80 L.interrogans:80

Q8SRG6              	100.00%		Q9XD19              	100.00%
Bootstrap support for Q8SRG6 as seed ortholog is 100%.
Bootstrap support for Q9XD19 as seed ortholog is 100%.

Group of orthologs #94. Best score 79 bits
Score difference with first non-orthologous sequence - E.cuniculi:79 L.interrogans:79

Q8SRA7              	100.00%		Q9XD26              	100.00%
Bootstrap support for Q8SRA7 as seed ortholog is 100%.
Bootstrap support for Q9XD26 as seed ortholog is 100%.

Group of orthologs #95. Best score 78 bits
Score difference with first non-orthologous sequence - E.cuniculi:78 L.interrogans:78

Q8SW70              	100.00%		Q8EY77              	100.00%
Bootstrap support for Q8SW70 as seed ortholog is 100%.
Bootstrap support for Q8EY77 as seed ortholog is 100%.

Group of orthologs #96. Best score 77 bits
Score difference with first non-orthologous sequence - E.cuniculi:77 L.interrogans:77

Q8SVK5              	100.00%		Q8F622              	100.00%
Bootstrap support for Q8SVK5 as seed ortholog is 100%.
Bootstrap support for Q8F622 as seed ortholog is 100%.

Group of orthologs #97. Best score 75 bits
Score difference with first non-orthologous sequence - E.cuniculi:75 L.interrogans:75

Q8SR45              	100.00%		Q8F3E9              	100.00%
Bootstrap support for Q8SR45 as seed ortholog is 100%.
Bootstrap support for Q8F3E9 as seed ortholog is 100%.

Group of orthologs #98. Best score 75 bits
Score difference with first non-orthologous sequence - E.cuniculi:75 L.interrogans:75

Q8SRS0              	100.00%		Q8F729              	100.00%
Bootstrap support for Q8SRS0 as seed ortholog is 100%.
Bootstrap support for Q8F729 as seed ortholog is 100%.

Group of orthologs #99. Best score 74 bits
Score difference with first non-orthologous sequence - E.cuniculi:74 L.interrogans:28

Q8SS32              	100.00%		Q8EZQ7              	100.00%
Bootstrap support for Q8SS32 as seed ortholog is 100%.
Bootstrap support for Q8EZQ7 as seed ortholog is 81%.

Group of orthologs #100. Best score 71 bits
Score difference with first non-orthologous sequence - E.cuniculi:71 L.interrogans:71

Q8SRQ0              	100.00%		Q8F426              	100.00%
Q8SQL4              	10.96%		
Bootstrap support for Q8SRQ0 as seed ortholog is 100%.
Bootstrap support for Q8F426 as seed ortholog is 100%.

Group of orthologs #101. Best score 71 bits
Score difference with first non-orthologous sequence - E.cuniculi:71 L.interrogans:71

Q8SRN6              	100.00%		Q8F392              	100.00%
Bootstrap support for Q8SRN6 as seed ortholog is 100%.
Bootstrap support for Q8F392 as seed ortholog is 100%.

Group of orthologs #102. Best score 71 bits
Score difference with first non-orthologous sequence - E.cuniculi:71 L.interrogans:71

Q8SS22              	100.00%		Q8F7Y6              	100.00%
Bootstrap support for Q8SS22 as seed ortholog is 100%.
Bootstrap support for Q8F7Y6 as seed ortholog is 100%.

Group of orthologs #103. Best score 71 bits
Score difference with first non-orthologous sequence - E.cuniculi:71 L.interrogans:71

Q8SRM9              	100.00%		Q8F8N1              	100.00%
Bootstrap support for Q8SRM9 as seed ortholog is 100%.
Bootstrap support for Q8F8N1 as seed ortholog is 100%.

Group of orthologs #104. Best score 70 bits
Score difference with first non-orthologous sequence - E.cuniculi:70 L.interrogans:70

Q8SQJ8              	100.00%		Q8F144              	100.00%
Bootstrap support for Q8SQJ8 as seed ortholog is 100%.
Bootstrap support for Q8F144 as seed ortholog is 100%.

Group of orthologs #105. Best score 70 bits
Score difference with first non-orthologous sequence - E.cuniculi:70 L.interrogans:70

Q8SS13              	100.00%		Q8EZ70              	100.00%
Bootstrap support for Q8SS13 as seed ortholog is 100%.
Bootstrap support for Q8EZ70 as seed ortholog is 100%.

Group of orthologs #106. Best score 70 bits
Score difference with first non-orthologous sequence - E.cuniculi:70 L.interrogans:70

Q8SUB6              	100.00%		Q8F327              	100.00%
Bootstrap support for Q8SUB6 as seed ortholog is 100%.
Bootstrap support for Q8F327 as seed ortholog is 100%.

Group of orthologs #107. Best score 68 bits
Score difference with first non-orthologous sequence - E.cuniculi:68 L.interrogans:68

Q8SVF0              	100.00%		Q8F153              	100.00%
Bootstrap support for Q8SVF0 as seed ortholog is 100%.
Bootstrap support for Q8F153 as seed ortholog is 100%.

Group of orthologs #108. Best score 67 bits
Score difference with first non-orthologous sequence - E.cuniculi:67 L.interrogans:67

Q8SR69              	100.00%		Q8EZ21              	100.00%
Bootstrap support for Q8SR69 as seed ortholog is 100%.
Bootstrap support for Q8EZ21 as seed ortholog is 100%.

Group of orthologs #109. Best score 66 bits
Score difference with first non-orthologous sequence - E.cuniculi:66 L.interrogans:66

Q8SR80              	100.00%		Q8F305              	100.00%
Bootstrap support for Q8SR80 as seed ortholog is 100%.
Bootstrap support for Q8F305 as seed ortholog is 100%.

Group of orthologs #110. Best score 65 bits
Score difference with first non-orthologous sequence - E.cuniculi:65 L.interrogans:65

Q95ZE3              	100.00%		Q8F145              	100.00%
Bootstrap support for Q95ZE3 as seed ortholog is 100%.
Bootstrap support for Q8F145 as seed ortholog is 100%.

Group of orthologs #111. Best score 64 bits
Score difference with first non-orthologous sequence - E.cuniculi:64 L.interrogans:64

Q8SSE9              	100.00%		Q8F513              	100.00%
Q8SRA9              	11.01%		
Q8SRT4              	7.88%		
Bootstrap support for Q8SSE9 as seed ortholog is 100%.
Bootstrap support for Q8F513 as seed ortholog is 100%.

Group of orthologs #112. Best score 61 bits
Score difference with first non-orthologous sequence - E.cuniculi:61 L.interrogans:61

Q8SSG6              	100.00%		Q8CXU0              	100.00%
Q8SSI2              	16.53%		
Bootstrap support for Q8SSG6 as seed ortholog is 100%.
Bootstrap support for Q8CXU0 as seed ortholog is 100%.

Group of orthologs #113. Best score 61 bits
Score difference with first non-orthologous sequence - E.cuniculi:61 L.interrogans:61

Q8SS59              	100.00%		Q8F8Z3              	100.00%
Bootstrap support for Q8SS59 as seed ortholog is 100%.
Bootstrap support for Q8F8Z3 as seed ortholog is 100%.

Group of orthologs #114. Best score 58 bits
Score difference with first non-orthologous sequence - E.cuniculi:58 L.interrogans:58

Q8SRV7              	100.00%		Q8F411              	100.00%
Bootstrap support for Q8SRV7 as seed ortholog is 100%.
Bootstrap support for Q8F411 as seed ortholog is 100%.

Group of orthologs #115. Best score 58 bits
Score difference with first non-orthologous sequence - E.cuniculi:58 L.interrogans:58

Q8SSA6              	100.00%		Q9XD11              	100.00%
Bootstrap support for Q8SSA6 as seed ortholog is 100%.
Bootstrap support for Q9XD11 as seed ortholog is 100%.

Group of orthologs #116. Best score 56 bits
Score difference with first non-orthologous sequence - E.cuniculi:56 L.interrogans:56

Q8SRW0              	100.00%		Q8CXU1              	100.00%
Bootstrap support for Q8SRW0 as seed ortholog is 100%.
Bootstrap support for Q8CXU1 as seed ortholog is 100%.

Group of orthologs #117. Best score 55 bits
Score difference with first non-orthologous sequence - E.cuniculi:55 L.interrogans:55

Q8SQX0              	100.00%		P52277              	100.00%
Bootstrap support for Q8SQX0 as seed ortholog is 100%.
Bootstrap support for P52277 as seed ortholog is 100%.

Group of orthologs #118. Best score 55 bits
Score difference with first non-orthologous sequence - E.cuniculi:55 L.interrogans:14

Q8SQM4              	100.00%		Q8F473              	100.00%
Bootstrap support for Q8SQM4 as seed ortholog is 100%.
Bootstrap support for Q8F473 as seed ortholog is 64%.
Alternative seed ortholog is Q8EYF9 (14 bits away from this cluster)

Group of orthologs #119. Best score 54 bits
Score difference with first non-orthologous sequence - E.cuniculi:54 L.interrogans:54

Q8SRA8              	100.00%		Q8EXT7              	100.00%
Bootstrap support for Q8SRA8 as seed ortholog is 100%.
Bootstrap support for Q8EXT7 as seed ortholog is 100%.

Group of orthologs #120. Best score 53 bits
Score difference with first non-orthologous sequence - E.cuniculi:53 L.interrogans:53

Q8SVR6              	100.00%		Q8F080              	100.00%
Bootstrap support for Q8SVR6 as seed ortholog is 100%.
Bootstrap support for Q8F080 as seed ortholog is 100%.

Group of orthologs #121. Best score 52 bits
Score difference with first non-orthologous sequence - E.cuniculi:52 L.interrogans:52

I7IV42              	100.00%		Q8F5E6              	100.00%
Bootstrap support for I7IV42 as seed ortholog is 100%.
Bootstrap support for Q8F5E6 as seed ortholog is 100%.

Group of orthologs #122. Best score 52 bits
Score difference with first non-orthologous sequence - E.cuniculi:52 L.interrogans:52

Q8SVU7              	100.00%		Q8F5P6              	100.00%
Bootstrap support for Q8SVU7 as seed ortholog is 100%.
Bootstrap support for Q8F5P6 as seed ortholog is 100%.

Group of orthologs #123. Best score 50 bits
Score difference with first non-orthologous sequence - E.cuniculi:50 L.interrogans:50

Q8STQ4              	100.00%		Q8EY01              	100.00%
Bootstrap support for Q8STQ4 as seed ortholog is 100%.
Bootstrap support for Q8EY01 as seed ortholog is 100%.

Group of orthologs #124. Best score 47 bits
Score difference with first non-orthologous sequence - E.cuniculi:47 L.interrogans:47

Q8SR65              	100.00%		P59164              	100.00%
Bootstrap support for Q8SR65 as seed ortholog is 100%.
Bootstrap support for P59164 as seed ortholog is 100%.

Group of orthologs #125. Best score 47 bits
Score difference with first non-orthologous sequence - E.cuniculi:47 L.interrogans:47

Q8SSD6              	100.00%		Q8EXN4              	100.00%
Bootstrap support for Q8SSD6 as seed ortholog is 100%.
Bootstrap support for Q8EXN4 as seed ortholog is 100%.

Group of orthologs #126. Best score 47 bits
Score difference with first non-orthologous sequence - E.cuniculi:47 L.interrogans:47

Q8SSH0              	100.00%		Q8F4C5              	100.00%
Bootstrap support for Q8SSH0 as seed ortholog is 100%.
Bootstrap support for Q8F4C5 as seed ortholog is 100%.

Group of orthologs #127. Best score 46 bits
Score difference with first non-orthologous sequence - E.cuniculi:1 L.interrogans:46

Q8SR62              	100.00%		Q8F4J7              	100.00%
Bootstrap support for Q8SR62 as seed ortholog is 50%.
Alternative seed ortholog is Q8SRE4 (1 bits away from this cluster)
Bootstrap support for Q8F4J7 as seed ortholog is 100%.

Group of orthologs #128. Best score 44 bits
Score difference with first non-orthologous sequence - E.cuniculi:44 L.interrogans:44

Q8SUB8              	100.00%		Q8F9Y4              	100.00%
Bootstrap support for Q8SUB8 as seed ortholog is 100%.
Bootstrap support for Q8F9Y4 as seed ortholog is 100%.

Group of orthologs #129. Best score 43 bits
Score difference with first non-orthologous sequence - E.cuniculi:43 L.interrogans:43

Q8SSM2              	100.00%		Q8F0D6              	100.00%
Bootstrap support for Q8SSM2 as seed ortholog is 100%.
Bootstrap support for Q8F0D6 as seed ortholog is 100%.

Group of orthologs #130. Best score 42 bits
Score difference with first non-orthologous sequence - E.cuniculi:42 L.interrogans:42

Q8SSA4              	100.00%		Q8F3L5              	100.00%
Bootstrap support for Q8SSA4 as seed ortholog is 100%.
Bootstrap support for Q8F3L5 as seed ortholog is 100%.

Group of orthologs #131. Best score 41 bits
Score difference with first non-orthologous sequence - E.cuniculi:41 L.interrogans:41

Q8STN5              	100.00%		Q8F2V7              	100.00%
Bootstrap support for Q8STN5 as seed ortholog is 100%.
Bootstrap support for Q8F2V7 as seed ortholog is 100%.