###################################
112 groups of orthologs
133 in-paralogs from D.radiodurans
137 in-paralogs from N.parisii
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 585 bits
Score difference with first non-orthologous sequence - D.radiodurans:130 N.parisii:585

Q9RVI3              	100.00%		I3EL83              	100.00%
Bootstrap support for Q9RVI3 as seed ortholog is 99%.
Bootstrap support for I3EL83 as seed ortholog is 100%.

Group of orthologs #2. Best score 574 bits
Score difference with first non-orthologous sequence - D.radiodurans:478 N.parisii:574

Q9RY06              	100.00%		I3EQN8              	100.00%
Bootstrap support for Q9RY06 as seed ortholog is 100%.
Bootstrap support for I3EQN8 as seed ortholog is 100%.

Group of orthologs #3. Best score 521 bits
Score difference with first non-orthologous sequence - D.radiodurans:521 N.parisii:521

Q9RWG8              	100.00%		I3ESE3              	100.00%
Bootstrap support for Q9RWG8 as seed ortholog is 100%.
Bootstrap support for I3ESE3 as seed ortholog is 100%.

Group of orthologs #4. Best score 471 bits
Score difference with first non-orthologous sequence - D.radiodurans:471 N.parisii:471

Q9RWG7              	100.00%		I3ENE4              	100.00%
Bootstrap support for Q9RWG7 as seed ortholog is 100%.
Bootstrap support for I3ENE4 as seed ortholog is 100%.

Group of orthologs #5. Best score 455 bits
Score difference with first non-orthologous sequence - D.radiodurans:455 N.parisii:10

Q9RY23              	100.00%		I3ESJ3              	100.00%
Bootstrap support for Q9RY23 as seed ortholog is 100%.
Bootstrap support for I3ESJ3 as seed ortholog is 64%.
Alternative seed ortholog is I3EP68 (10 bits away from this cluster)

Group of orthologs #6. Best score 435 bits
Score difference with first non-orthologous sequence - D.radiodurans:325 N.parisii:435

Q9RUP8              	100.00%		I3ELA1              	100.00%
Bootstrap support for Q9RUP8 as seed ortholog is 100%.
Bootstrap support for I3ELA1 as seed ortholog is 100%.

Group of orthologs #7. Best score 420 bits
Score difference with first non-orthologous sequence - D.radiodurans:420 N.parisii:420

Q9RSP3              	100.00%		I3EPQ0              	100.00%
Bootstrap support for Q9RSP3 as seed ortholog is 100%.
Bootstrap support for I3EPQ0 as seed ortholog is 100%.

Group of orthologs #8. Best score 399 bits
Score difference with first non-orthologous sequence - D.radiodurans:399 N.parisii:399

Q9RS27              	100.00%		I3ESG5              	100.00%
Bootstrap support for Q9RS27 as seed ortholog is 100%.
Bootstrap support for I3ESG5 as seed ortholog is 100%.

Group of orthologs #9. Best score 382 bits
Score difference with first non-orthologous sequence - D.radiodurans:239 N.parisii:382

Q9RXE1              	100.00%		I3ELR5              	100.00%
Bootstrap support for Q9RXE1 as seed ortholog is 100%.
Bootstrap support for I3ELR5 as seed ortholog is 100%.

Group of orthologs #10. Best score 378 bits
Score difference with first non-orthologous sequence - D.radiodurans:378 N.parisii:378

Q9RU23              	100.00%		I3ESI0              	100.00%
Bootstrap support for Q9RU23 as seed ortholog is 100%.
Bootstrap support for I3ESI0 as seed ortholog is 100%.

Group of orthologs #11. Best score 364 bits
Score difference with first non-orthologous sequence - D.radiodurans:364 N.parisii:364

Q9RXK9              	100.00%		I3ELV0              	100.00%
Bootstrap support for Q9RXK9 as seed ortholog is 100%.
Bootstrap support for I3ELV0 as seed ortholog is 100%.

Group of orthologs #12. Best score 359 bits
Score difference with first non-orthologous sequence - D.radiodurans:359 N.parisii:359

Q9RTL8              	100.00%		I3ESQ9              	100.00%
Bootstrap support for Q9RTL8 as seed ortholog is 100%.
Bootstrap support for I3ESQ9 as seed ortholog is 100%.

Group of orthologs #13. Best score 326 bits
Score difference with first non-orthologous sequence - D.radiodurans:255 N.parisii:326

Q9RS71              	100.00%		I3ELS5              	100.00%
Bootstrap support for Q9RS71 as seed ortholog is 100%.
Bootstrap support for I3ELS5 as seed ortholog is 100%.

Group of orthologs #14. Best score 315 bits
Score difference with first non-orthologous sequence - D.radiodurans:315 N.parisii:315

Q9RVW0              	100.00%		I3EQC3              	100.00%
                    	       		I3ENR7              	12.81%
                    	       		I3EQW9              	5.66%
Bootstrap support for Q9RVW0 as seed ortholog is 100%.
Bootstrap support for I3EQC3 as seed ortholog is 100%.

Group of orthologs #15. Best score 313 bits
Score difference with first non-orthologous sequence - D.radiodurans:313 N.parisii:313

Q9RUU2              	100.00%		I3ELM0              	100.00%
Bootstrap support for Q9RUU2 as seed ortholog is 100%.
Bootstrap support for I3ELM0 as seed ortholog is 100%.

Group of orthologs #16. Best score 313 bits
Score difference with first non-orthologous sequence - D.radiodurans:313 N.parisii:313

Q9RWM6              	100.00%		I3ERJ9              	100.00%
Bootstrap support for Q9RWM6 as seed ortholog is 100%.
Bootstrap support for I3ERJ9 as seed ortholog is 100%.

Group of orthologs #17. Best score 302 bits
Score difference with first non-orthologous sequence - D.radiodurans:302 N.parisii:302

Q9RVK8              	100.00%		I3ENH8              	100.00%
Bootstrap support for Q9RVK8 as seed ortholog is 100%.
Bootstrap support for I3ENH8 as seed ortholog is 100%.

Group of orthologs #18. Best score 297 bits
Score difference with first non-orthologous sequence - D.radiodurans:297 N.parisii:297

Q9RUW4              	100.00%		I3ESM7              	100.00%
Bootstrap support for Q9RUW4 as seed ortholog is 100%.
Bootstrap support for I3ESM7 as seed ortholog is 100%.

Group of orthologs #19. Best score 271 bits
Score difference with first non-orthologous sequence - D.radiodurans:162 N.parisii:271

Q9RRL7              	100.00%		I3ES32              	100.00%
Q9RX55              	17.82%		
Bootstrap support for Q9RRL7 as seed ortholog is 99%.
Bootstrap support for I3ES32 as seed ortholog is 100%.

Group of orthologs #20. Best score 265 bits
Score difference with first non-orthologous sequence - D.radiodurans:265 N.parisii:265

Q9RR67              	100.00%		I3ELG7              	100.00%
Bootstrap support for Q9RR67 as seed ortholog is 100%.
Bootstrap support for I3ELG7 as seed ortholog is 100%.

Group of orthologs #21. Best score 260 bits
Score difference with first non-orthologous sequence - D.radiodurans:260 N.parisii:260

Q9RVV9              	100.00%		I3ESM3              	100.00%
                    	       		I3ELM9              	15.82%
Bootstrap support for Q9RVV9 as seed ortholog is 100%.
Bootstrap support for I3ESM3 as seed ortholog is 100%.

Group of orthologs #22. Best score 260 bits
Score difference with first non-orthologous sequence - D.radiodurans:260 N.parisii:260

Q9RYB2              	100.00%		I3EMK6              	100.00%
Bootstrap support for Q9RYB2 as seed ortholog is 100%.
Bootstrap support for I3EMK6 as seed ortholog is 100%.

Group of orthologs #23. Best score 255 bits
Score difference with first non-orthologous sequence - D.radiodurans:255 N.parisii:255

Q9RUP1              	100.00%		I3ET30              	100.00%
Bootstrap support for Q9RUP1 as seed ortholog is 100%.
Bootstrap support for I3ET30 as seed ortholog is 100%.

Group of orthologs #24. Best score 250 bits
Score difference with first non-orthologous sequence - D.radiodurans:250 N.parisii:50

Q9RX95              	100.00%		I3EMR2              	100.00%
Bootstrap support for Q9RX95 as seed ortholog is 100%.
Bootstrap support for I3EMR2 as seed ortholog is 91%.

Group of orthologs #25. Best score 236 bits
Score difference with first non-orthologous sequence - D.radiodurans:236 N.parisii:236

Q9RUK0              	100.00%		I3EM45              	100.00%
Bootstrap support for Q9RUK0 as seed ortholog is 100%.
Bootstrap support for I3EM45 as seed ortholog is 100%.

Group of orthologs #26. Best score 223 bits
Score difference with first non-orthologous sequence - D.radiodurans:223 N.parisii:223

Q9RTT6              	100.00%		I3EL43              	100.00%
Bootstrap support for Q9RTT6 as seed ortholog is 100%.
Bootstrap support for I3EL43 as seed ortholog is 100%.

Group of orthologs #27. Best score 221 bits
Score difference with first non-orthologous sequence - D.radiodurans:78 N.parisii:58

Q9RVH4              	100.00%		I3ESW9              	100.00%
Bootstrap support for Q9RVH4 as seed ortholog is 97%.
Bootstrap support for I3ESW9 as seed ortholog is 89%.

Group of orthologs #28. Best score 215 bits
Score difference with first non-orthologous sequence - D.radiodurans:215 N.parisii:215

Q9RSR5              	100.00%		I3ET79              	100.00%
Bootstrap support for Q9RSR5 as seed ortholog is 100%.
Bootstrap support for I3ET79 as seed ortholog is 100%.

Group of orthologs #29. Best score 209 bits
Score difference with first non-orthologous sequence - D.radiodurans:71 N.parisii:209

Q9RZL7              	100.00%		I3ENI5              	100.00%
Bootstrap support for Q9RZL7 as seed ortholog is 91%.
Bootstrap support for I3ENI5 as seed ortholog is 100%.

Group of orthologs #30. Best score 207 bits
Score difference with first non-orthologous sequence - D.radiodurans:157 N.parisii:207

Q9RXU1              	100.00%		I3EMC0              	100.00%
Bootstrap support for Q9RXU1 as seed ortholog is 100%.
Bootstrap support for I3EMC0 as seed ortholog is 100%.

Group of orthologs #31. Best score 206 bits
Score difference with first non-orthologous sequence - D.radiodurans:206 N.parisii:206

Q9RWF2              	100.00%		I3EN58              	100.00%
Bootstrap support for Q9RWF2 as seed ortholog is 100%.
Bootstrap support for I3EN58 as seed ortholog is 100%.

Group of orthologs #32. Best score 203 bits
Score difference with first non-orthologous sequence - D.radiodurans:203 N.parisii:203

Q9RUV5              	100.00%		I3EM49              	100.00%
Bootstrap support for Q9RUV5 as seed ortholog is 100%.
Bootstrap support for I3EM49 as seed ortholog is 100%.

Group of orthologs #33. Best score 201 bits
Score difference with first non-orthologous sequence - D.radiodurans:160 N.parisii:201

Q9RSY7              	100.00%		I3ENF0              	100.00%
Bootstrap support for Q9RSY7 as seed ortholog is 99%.
Bootstrap support for I3ENF0 as seed ortholog is 100%.

Group of orthologs #34. Best score 193 bits
Score difference with first non-orthologous sequence - D.radiodurans:193 N.parisii:193

Q9RR62              	100.00%		I3ENC5              	100.00%
Bootstrap support for Q9RR62 as seed ortholog is 100%.
Bootstrap support for I3ENC5 as seed ortholog is 100%.

Group of orthologs #35. Best score 189 bits
Score difference with first non-orthologous sequence - D.radiodurans:189 N.parisii:189

Q9RWH9              	100.00%		I3ESH9              	100.00%
Bootstrap support for Q9RWH9 as seed ortholog is 100%.
Bootstrap support for I3ESH9 as seed ortholog is 100%.

Group of orthologs #36. Best score 186 bits
Score difference with first non-orthologous sequence - D.radiodurans:186 N.parisii:186

Q9RYC0              	100.00%		I3EMJ2              	100.00%
Bootstrap support for Q9RYC0 as seed ortholog is 100%.
Bootstrap support for I3EMJ2 as seed ortholog is 100%.

Group of orthologs #37. Best score 180 bits
Score difference with first non-orthologous sequence - D.radiodurans:180 N.parisii:26

Q9RXH8              	100.00%		I3EN30              	100.00%
Bootstrap support for Q9RXH8 as seed ortholog is 100%.
Bootstrap support for I3EN30 as seed ortholog is 73%.
Alternative seed ortholog is I3EL22 (26 bits away from this cluster)

Group of orthologs #38. Best score 179 bits
Score difference with first non-orthologous sequence - D.radiodurans:30 N.parisii:179

Q9RXK5              	100.00%		I3ERD8              	100.00%
Q9RXC2              	20.93%		
Bootstrap support for Q9RXK5 as seed ortholog is 73%.
Alternative seed ortholog is Q9RV32 (30 bits away from this cluster)
Bootstrap support for I3ERD8 as seed ortholog is 100%.

Group of orthologs #39. Best score 177 bits
Score difference with first non-orthologous sequence - D.radiodurans:177 N.parisii:177

Q9RTC9              	100.00%		I3ELA0              	100.00%
Bootstrap support for Q9RTC9 as seed ortholog is 100%.
Bootstrap support for I3ELA0 as seed ortholog is 100%.

Group of orthologs #40. Best score 174 bits
Score difference with first non-orthologous sequence - D.radiodurans:174 N.parisii:174

Q9RRY6              	100.00%		I3EMR1              	100.00%
Bootstrap support for Q9RRY6 as seed ortholog is 100%.
Bootstrap support for I3EMR1 as seed ortholog is 100%.

Group of orthologs #41. Best score 171 bits
Score difference with first non-orthologous sequence - D.radiodurans:171 N.parisii:95

Q9RUX1              	100.00%		I3ERS7              	100.00%
Bootstrap support for Q9RUX1 as seed ortholog is 100%.
Bootstrap support for I3ERS7 as seed ortholog is 98%.

Group of orthologs #42. Best score 162 bits
Score difference with first non-orthologous sequence - D.radiodurans:162 N.parisii:162

Q9RXG0              	100.00%		I3EPH6              	100.00%
Bootstrap support for Q9RXG0 as seed ortholog is 100%.
Bootstrap support for I3EPH6 as seed ortholog is 100%.

Group of orthologs #43. Best score 153 bits
Score difference with first non-orthologous sequence - D.radiodurans:153 N.parisii:153

Q9RUP2              	100.00%		I3EQ49              	100.00%
Bootstrap support for Q9RUP2 as seed ortholog is 100%.
Bootstrap support for I3EQ49 as seed ortholog is 100%.

Group of orthologs #44. Best score 149 bits
Score difference with first non-orthologous sequence - D.radiodurans:149 N.parisii:149

Q9RTG5              	100.00%		I3EPM7              	100.00%
Bootstrap support for Q9RTG5 as seed ortholog is 100%.
Bootstrap support for I3EPM7 as seed ortholog is 100%.

Group of orthologs #45. Best score 149 bits
Score difference with first non-orthologous sequence - D.radiodurans:149 N.parisii:149

Q9RUF3              	100.00%		I3ERE2              	100.00%
Bootstrap support for Q9RUF3 as seed ortholog is 100%.
Bootstrap support for I3ERE2 as seed ortholog is 100%.

Group of orthologs #46. Best score 147 bits
Score difference with first non-orthologous sequence - D.radiodurans:147 N.parisii:147

Q9RZ85              	100.00%		I3EQ55              	100.00%
                    	       		I3EL51              	14.17%
Bootstrap support for Q9RZ85 as seed ortholog is 100%.
Bootstrap support for I3EQ55 as seed ortholog is 100%.

Group of orthologs #47. Best score 139 bits
Score difference with first non-orthologous sequence - D.radiodurans:139 N.parisii:139

Q9RU02              	100.00%		I3ER21              	100.00%
Bootstrap support for Q9RU02 as seed ortholog is 100%.
Bootstrap support for I3ER21 as seed ortholog is 100%.

Group of orthologs #48. Best score 134 bits
Score difference with first non-orthologous sequence - D.radiodurans:134 N.parisii:20

Q9RWL9              	100.00%		I3EQX5              	100.00%
                    	       		I3ET40              	31.35%
                    	       		I3ESD8              	29.58%
                    	       		I3ELP6              	29.10%
                    	       		I3EPK9              	26.05%
                    	       		I3ENQ7              	25.08%
Bootstrap support for Q9RWL9 as seed ortholog is 100%.
Bootstrap support for I3EQX5 as seed ortholog is 72%.
Alternative seed ortholog is I3EPJ8 (20 bits away from this cluster)

Group of orthologs #49. Best score 133 bits
Score difference with first non-orthologous sequence - D.radiodurans:133 N.parisii:41

Q9R342              	100.00%		I3EQN2              	100.00%
                    	       		I3EMS2              	5.24%
Bootstrap support for Q9R342 as seed ortholog is 100%.
Bootstrap support for I3EQN2 as seed ortholog is 80%.

Group of orthologs #50. Best score 127 bits
Score difference with first non-orthologous sequence - D.radiodurans:127 N.parisii:127

Q9RYK2              	100.00%		I3EM37              	100.00%
Bootstrap support for Q9RYK2 as seed ortholog is 100%.
Bootstrap support for I3EM37 as seed ortholog is 100%.

Group of orthologs #51. Best score 123 bits
Score difference with first non-orthologous sequence - D.radiodurans:123 N.parisii:23

Q9RVM9              	100.00%		I3EPN5              	100.00%
Bootstrap support for Q9RVM9 as seed ortholog is 100%.
Bootstrap support for I3EPN5 as seed ortholog is 78%.

Group of orthologs #52. Best score 123 bits
Score difference with first non-orthologous sequence - D.radiodurans:123 N.parisii:123

Q9RUG2              	100.00%		I3ET45              	100.00%
Bootstrap support for Q9RUG2 as seed ortholog is 100%.
Bootstrap support for I3ET45 as seed ortholog is 100%.

Group of orthologs #53. Best score 121 bits
Score difference with first non-orthologous sequence - D.radiodurans:121 N.parisii:121

Q9RRJ1              	100.00%		I3EP25              	100.00%
Bootstrap support for Q9RRJ1 as seed ortholog is 100%.
Bootstrap support for I3EP25 as seed ortholog is 100%.

Group of orthologs #54. Best score 118 bits
Score difference with first non-orthologous sequence - D.radiodurans:9 N.parisii:118

Q9RWF8              	100.00%		I3EMJ5              	100.00%
Bootstrap support for Q9RWF8 as seed ortholog is 59%.
Alternative seed ortholog is Q9RZC3 (9 bits away from this cluster)
Bootstrap support for I3EMJ5 as seed ortholog is 100%.

Group of orthologs #55. Best score 116 bits
Score difference with first non-orthologous sequence - D.radiodurans:116 N.parisii:32

Q9RZP0              	100.00%		I3EPF5              	100.00%
Bootstrap support for Q9RZP0 as seed ortholog is 100%.
Bootstrap support for I3EPF5 as seed ortholog is 69%.
Alternative seed ortholog is I3EQS4 (32 bits away from this cluster)

Group of orthologs #56. Best score 109 bits
Score difference with first non-orthologous sequence - D.radiodurans:109 N.parisii:109

Q9RRW5              	100.00%		I3EMJ8              	100.00%
Q9RRG6              	34.00%		
Bootstrap support for Q9RRW5 as seed ortholog is 100%.
Bootstrap support for I3EMJ8 as seed ortholog is 100%.

Group of orthologs #57. Best score 109 bits
Score difference with first non-orthologous sequence - D.radiodurans:109 N.parisii:109

Q9RUP5              	100.00%		I3ENB3              	100.00%
Bootstrap support for Q9RUP5 as seed ortholog is 100%.
Bootstrap support for I3ENB3 as seed ortholog is 100%.

Group of orthologs #58. Best score 103 bits
Score difference with first non-orthologous sequence - D.radiodurans:103 N.parisii:103

Q9RS38              	100.00%		I3EQL1              	100.00%
Bootstrap support for Q9RS38 as seed ortholog is 100%.
Bootstrap support for I3EQL1 as seed ortholog is 100%.

Group of orthologs #59. Best score 99 bits
Score difference with first non-orthologous sequence - D.radiodurans:99 N.parisii:99

Q9RTS2              	100.00%		I3EMD7              	100.00%
Bootstrap support for Q9RTS2 as seed ortholog is 100%.
Bootstrap support for I3EMD7 as seed ortholog is 100%.

Group of orthologs #60. Best score 99 bits
Score difference with first non-orthologous sequence - D.radiodurans:99 N.parisii:99

Q9RRX8              	100.00%		I3ER98              	100.00%
Bootstrap support for Q9RRX8 as seed ortholog is 100%.
Bootstrap support for I3ER98 as seed ortholog is 100%.

Group of orthologs #61. Best score 96 bits
Score difference with first non-orthologous sequence - D.radiodurans:96 N.parisii:96

Q9RYC1              	100.00%		I3ESL9              	100.00%
Bootstrap support for Q9RYC1 as seed ortholog is 100%.
Bootstrap support for I3ESL9 as seed ortholog is 100%.

Group of orthologs #62. Best score 95 bits
Score difference with first non-orthologous sequence - D.radiodurans:95 N.parisii:95

Q9RRC4              	100.00%		I3EQX4              	100.00%
Bootstrap support for Q9RRC4 as seed ortholog is 100%.
Bootstrap support for I3EQX4 as seed ortholog is 100%.

Group of orthologs #63. Best score 94 bits
Score difference with first non-orthologous sequence - D.radiodurans:94 N.parisii:94

Q9RZ81              	100.00%		I3EMB8              	100.00%
Q9RRN5              	19.15%		
Bootstrap support for Q9RZ81 as seed ortholog is 100%.
Bootstrap support for I3EMB8 as seed ortholog is 100%.

Group of orthologs #64. Best score 90 bits
Score difference with first non-orthologous sequence - D.radiodurans:90 N.parisii:90

Q9RU01              	100.00%		I3EQW4              	100.00%
Bootstrap support for Q9RU01 as seed ortholog is 100%.
Bootstrap support for I3EQW4 as seed ortholog is 100%.

Group of orthologs #65. Best score 90 bits
Score difference with first non-orthologous sequence - D.radiodurans:90 N.parisii:90

Q9RU68              	100.00%		I3EQR0              	100.00%
Bootstrap support for Q9RU68 as seed ortholog is 100%.
Bootstrap support for I3EQR0 as seed ortholog is 100%.

Group of orthologs #66. Best score 89 bits
Score difference with first non-orthologous sequence - D.radiodurans:89 N.parisii:89

Q9RUV2              	100.00%		I3ELA9              	100.00%
Bootstrap support for Q9RUV2 as seed ortholog is 100%.
Bootstrap support for I3ELA9 as seed ortholog is 100%.

Group of orthologs #67. Best score 89 bits
Score difference with first non-orthologous sequence - D.radiodurans:89 N.parisii:89

Q9RU70              	100.00%		I3ERT4              	100.00%
Bootstrap support for Q9RU70 as seed ortholog is 100%.
Bootstrap support for I3ERT4 as seed ortholog is 100%.

Group of orthologs #68. Best score 88 bits
Score difference with first non-orthologous sequence - D.radiodurans:88 N.parisii:88

Q9RXR9              	100.00%		I3ER18              	100.00%
Q9RRF0              	22.04%		
Q9RT72              	21.73%		
Bootstrap support for Q9RXR9 as seed ortholog is 100%.
Bootstrap support for I3ER18 as seed ortholog is 100%.

Group of orthologs #69. Best score 87 bits
Score difference with first non-orthologous sequence - D.radiodurans:87 N.parisii:87

Q9RR76              	100.00%		I3EMR0              	100.00%
Bootstrap support for Q9RR76 as seed ortholog is 100%.
Bootstrap support for I3EMR0 as seed ortholog is 100%.

Group of orthologs #70. Best score 86 bits
Score difference with first non-orthologous sequence - D.radiodurans:86 N.parisii:86

Q9RSB6              	100.00%		I3EST7              	100.00%
Bootstrap support for Q9RSB6 as seed ortholog is 100%.
Bootstrap support for I3EST7 as seed ortholog is 100%.

Group of orthologs #71. Best score 85 bits
Score difference with first non-orthologous sequence - D.radiodurans:85 N.parisii:85

Q9RXJ9              	100.00%		I3EP93              	100.00%
Bootstrap support for Q9RXJ9 as seed ortholog is 100%.
Bootstrap support for I3EP93 as seed ortholog is 100%.

Group of orthologs #72. Best score 82 bits
Score difference with first non-orthologous sequence - D.radiodurans:82 N.parisii:82

Q9RZJ1              	100.00%		I3EPU3              	100.00%
                    	       		I3ES59              	20.00%
                    	       		I3EN52              	18.10%
Bootstrap support for Q9RZJ1 as seed ortholog is 100%.
Bootstrap support for I3EPU3 as seed ortholog is 100%.

Group of orthologs #73. Best score 80 bits
Score difference with first non-orthologous sequence - D.radiodurans:80 N.parisii:80

Q9RW36              	100.00%		I3ELC9              	100.00%
                    	       		I3ES99              	38.93%
Bootstrap support for Q9RW36 as seed ortholog is 100%.
Bootstrap support for I3ELC9 as seed ortholog is 100%.

Group of orthologs #74. Best score 80 bits
Score difference with first non-orthologous sequence - D.radiodurans:80 N.parisii:80

Q9RSL1              	100.00%		I3ELM5              	100.00%
Bootstrap support for Q9RSL1 as seed ortholog is 100%.
Bootstrap support for I3ELM5 as seed ortholog is 100%.

Group of orthologs #75. Best score 79 bits
Score difference with first non-orthologous sequence - D.radiodurans:79 N.parisii:79

Q9RWQ9              	100.00%		I3EMV8              	100.00%
                    	       		I3EPJ6              	12.30%
                    	       		I3EQY1              	11.64%
                    	       		I3EP71              	9.68%
                    	       		I3ERT3              	9.36%
                    	       		I3ENX8              	7.29%
                    	       		I3EM76              	5.98%
Bootstrap support for Q9RWQ9 as seed ortholog is 100%.
Bootstrap support for I3EMV8 as seed ortholog is 100%.

Group of orthologs #76. Best score 79 bits
Score difference with first non-orthologous sequence - D.radiodurans:79 N.parisii:79

Q9RVC7              	100.00%		I3ERD3              	100.00%
Bootstrap support for Q9RVC7 as seed ortholog is 100%.
Bootstrap support for I3ERD3 as seed ortholog is 100%.

Group of orthologs #77. Best score 76 bits
Score difference with first non-orthologous sequence - D.radiodurans:76 N.parisii:27

Q9RV17              	100.00%		I3EP39              	100.00%
                    	       		I3EPK1              	9.45%
                    	       		I3EPI4              	7.56%
                    	       		I3ENV8              	5.25%
Bootstrap support for Q9RV17 as seed ortholog is 100%.
Bootstrap support for I3EP39 as seed ortholog is 79%.

Group of orthologs #78. Best score 76 bits
Score difference with first non-orthologous sequence - D.radiodurans:76 N.parisii:76

Q9RWG6              	100.00%		I3ELM1              	100.00%
Bootstrap support for Q9RWG6 as seed ortholog is 100%.
Bootstrap support for I3ELM1 as seed ortholog is 100%.

Group of orthologs #79. Best score 74 bits
Score difference with first non-orthologous sequence - D.radiodurans:74 N.parisii:74

Q9RRE9              	100.00%		I3EL90              	100.00%
Bootstrap support for Q9RRE9 as seed ortholog is 100%.
Bootstrap support for I3EL90 as seed ortholog is 100%.

Group of orthologs #80. Best score 71 bits
Score difference with first non-orthologous sequence - D.radiodurans:13 N.parisii:71

Q9RY08              	100.00%		I3EPA1              	100.00%
Bootstrap support for Q9RY08 as seed ortholog is 62%.
Alternative seed ortholog is Q9RZH8 (13 bits away from this cluster)
Bootstrap support for I3EPA1 as seed ortholog is 100%.

Group of orthologs #81. Best score 70 bits
Score difference with first non-orthologous sequence - D.radiodurans:70 N.parisii:70

Q9RSK7              	100.00%		I3ELK8              	100.00%
Bootstrap support for Q9RSK7 as seed ortholog is 100%.
Bootstrap support for I3ELK8 as seed ortholog is 100%.

Group of orthologs #82. Best score 69 bits
Score difference with first non-orthologous sequence - D.radiodurans:69 N.parisii:69

Q9RT67              	100.00%		I3EQY4              	100.00%
                    	       		I3ESF7              	13.98%
                    	       		I3EQE4              	12.43%
Bootstrap support for Q9RT67 as seed ortholog is 100%.
Bootstrap support for I3EQY4 as seed ortholog is 100%.

Group of orthologs #83. Best score 69 bits
Score difference with first non-orthologous sequence - D.radiodurans:69 N.parisii:10

Q9RTB4              	100.00%		I3ELC4              	100.00%
                    	       		I3ES45              	10.09%
Bootstrap support for Q9RTB4 as seed ortholog is 100%.
Bootstrap support for I3ELC4 as seed ortholog is 62%.
Alternative seed ortholog is I3ELJ0 (10 bits away from this cluster)

Group of orthologs #84. Best score 66 bits
Score difference with first non-orthologous sequence - D.radiodurans:66 N.parisii:66

Q9RTW7              	100.00%		I3EMG1              	100.00%
Q9RVC6              	19.64%		
Q9RX40              	13.97%		
Bootstrap support for Q9RTW7 as seed ortholog is 100%.
Bootstrap support for I3EMG1 as seed ortholog is 100%.

Group of orthologs #85. Best score 65 bits
Score difference with first non-orthologous sequence - D.radiodurans:65 N.parisii:65

Q9RT85              	100.00%		I3EMR5              	100.00%
Bootstrap support for Q9RT85 as seed ortholog is 100%.
Bootstrap support for I3EMR5 as seed ortholog is 100%.

Group of orthologs #86. Best score 65 bits
Score difference with first non-orthologous sequence - D.radiodurans:65 N.parisii:65

Q9RXJ2              	100.00%		I3EN34              	100.00%
Bootstrap support for Q9RXJ2 as seed ortholog is 100%.
Bootstrap support for I3EN34 as seed ortholog is 100%.

Group of orthologs #87. Best score 63 bits
Score difference with first non-orthologous sequence - D.radiodurans:63 N.parisii:63

Q9RU33              	100.00%		I3ERX8              	100.00%
Bootstrap support for Q9RU33 as seed ortholog is 100%.
Bootstrap support for I3ERX8 as seed ortholog is 100%.

Group of orthologs #88. Best score 63 bits
Score difference with first non-orthologous sequence - D.radiodurans:63 N.parisii:63

Q9RXJ6              	100.00%		I3EQZ7              	100.00%
Bootstrap support for Q9RXJ6 as seed ortholog is 100%.
Bootstrap support for I3EQZ7 as seed ortholog is 100%.

Group of orthologs #89. Best score 62 bits
Score difference with first non-orthologous sequence - D.radiodurans:62 N.parisii:62

P42443              	100.00%		I3ESK7              	100.00%
Bootstrap support for P42443 as seed ortholog is 100%.
Bootstrap support for I3ESK7 as seed ortholog is 100%.

Group of orthologs #90. Best score 62 bits
Score difference with first non-orthologous sequence - D.radiodurans:62 N.parisii:62

Q9RUI5              	100.00%		I3EQI9              	100.00%
Bootstrap support for Q9RUI5 as seed ortholog is 100%.
Bootstrap support for I3EQI9 as seed ortholog is 100%.

Group of orthologs #91. Best score 61 bits
Score difference with first non-orthologous sequence - D.radiodurans:61 N.parisii:61

Q9RSQ3              	100.00%		I3EMM5              	100.00%
Q9RZA7              	7.43%		
Bootstrap support for Q9RSQ3 as seed ortholog is 100%.
Bootstrap support for I3EMM5 as seed ortholog is 100%.

Group of orthologs #92. Best score 61 bits
Score difference with first non-orthologous sequence - D.radiodurans:61 N.parisii:61

Q9RYF7              	100.00%		I3ER52              	100.00%
Bootstrap support for Q9RYF7 as seed ortholog is 100%.
Bootstrap support for I3ER52 as seed ortholog is 100%.

Group of orthologs #93. Best score 60 bits
Score difference with first non-orthologous sequence - D.radiodurans:60 N.parisii:60

Q9RRU0              	100.00%		I3EME3              	100.00%
Q9RZK7              	34.47%		
Q9RWL4              	28.50%		
Bootstrap support for Q9RRU0 as seed ortholog is 100%.
Bootstrap support for I3EME3 as seed ortholog is 100%.

Group of orthologs #94. Best score 59 bits
Score difference with first non-orthologous sequence - D.radiodurans:59 N.parisii:59

Q9RSJ8              	100.00%		I3EPI0              	100.00%
Bootstrap support for Q9RSJ8 as seed ortholog is 100%.
Bootstrap support for I3EPI0 as seed ortholog is 100%.

Group of orthologs #95. Best score 59 bits
Score difference with first non-orthologous sequence - D.radiodurans:3 N.parisii:59

Q9RUN5              	100.00%		I3EPR7              	100.00%
Bootstrap support for Q9RUN5 as seed ortholog is 81%.
Bootstrap support for I3EPR7 as seed ortholog is 100%.

Group of orthologs #96. Best score 56 bits
Score difference with first non-orthologous sequence - D.radiodurans:56 N.parisii:56

Q9RVD6              	100.00%		I3ER08              	100.00%
Q9RWV7              	19.97%		
Bootstrap support for Q9RVD6 as seed ortholog is 100%.
Bootstrap support for I3ER08 as seed ortholog is 100%.

Group of orthologs #97. Best score 56 bits
Score difference with first non-orthologous sequence - D.radiodurans:56 N.parisii:56

Q9RZL6              	100.00%		I3ELQ1              	100.00%
Bootstrap support for Q9RZL6 as seed ortholog is 100%.
Bootstrap support for I3ELQ1 as seed ortholog is 100%.

Group of orthologs #98. Best score 56 bits
Score difference with first non-orthologous sequence - D.radiodurans:56 N.parisii:56

Q9RU79              	100.00%		I3ESA9              	100.00%
Bootstrap support for Q9RU79 as seed ortholog is 100%.
Bootstrap support for I3ESA9 as seed ortholog is 100%.

Group of orthologs #99. Best score 55 bits
Score difference with first non-orthologous sequence - D.radiodurans:55 N.parisii:55

Q9RTA3              	100.00%		I3ENC9              	100.00%
Bootstrap support for Q9RTA3 as seed ortholog is 100%.
Bootstrap support for I3ENC9 as seed ortholog is 100%.

Group of orthologs #100. Best score 55 bits
Score difference with first non-orthologous sequence - D.radiodurans:13 N.parisii:55

Q9RU40              	100.00%		I3ER24              	100.00%
Bootstrap support for Q9RU40 as seed ortholog is 61%.
Alternative seed ortholog is Q9RV05 (13 bits away from this cluster)
Bootstrap support for I3ER24 as seed ortholog is 100%.

Group of orthologs #101. Best score 52 bits
Score difference with first non-orthologous sequence - D.radiodurans:52 N.parisii:52

Q9RTY0              	100.00%		I3EN10              	100.00%
Q9RYV6              	8.05%		
Q9RT30              	8.05%		
Q9RXA4              	7.02%		
Q9RUC2              	6.85%		
Q9RW47              	6.68%		
Q9RT26              	6.51%		
Bootstrap support for Q9RTY0 as seed ortholog is 100%.
Bootstrap support for I3EN10 as seed ortholog is 100%.

Group of orthologs #102. Best score 52 bits
Score difference with first non-orthologous sequence - D.radiodurans:52 N.parisii:52

Q9RXJ8              	100.00%		I3ELL4              	100.00%
Bootstrap support for Q9RXJ8 as seed ortholog is 100%.
Bootstrap support for I3ELL4 as seed ortholog is 100%.

Group of orthologs #103. Best score 52 bits
Score difference with first non-orthologous sequence - D.radiodurans:52 N.parisii:52

Q9RXK6              	100.00%		I3EM78              	100.00%
Bootstrap support for Q9RXK6 as seed ortholog is 100%.
Bootstrap support for I3EM78 as seed ortholog is 100%.

Group of orthologs #104. Best score 51 bits
Score difference with first non-orthologous sequence - D.radiodurans:51 N.parisii:1

Q9RS37              	100.00%		I3EN05              	100.00%
Bootstrap support for Q9RS37 as seed ortholog is 100%.
Bootstrap support for I3EN05 as seed ortholog is 46%.
Alternative seed ortholog is I3EM86 (1 bits away from this cluster)

Group of orthologs #105. Best score 51 bits
Score difference with first non-orthologous sequence - D.radiodurans:51 N.parisii:51

Q9RXJ0              	100.00%		I3ERM1              	100.00%
Bootstrap support for Q9RXJ0 as seed ortholog is 100%.
Bootstrap support for I3ERM1 as seed ortholog is 100%.

Group of orthologs #106. Best score 50 bits
Score difference with first non-orthologous sequence - D.radiodurans:50 N.parisii:50

Q9RR65              	100.00%		I3EN89              	100.00%
Bootstrap support for Q9RR65 as seed ortholog is 100%.
Bootstrap support for I3EN89 as seed ortholog is 100%.

Group of orthologs #107. Best score 46 bits
Score difference with first non-orthologous sequence - D.radiodurans:46 N.parisii:46

Q9RTX9              	100.00%		I3EPP3              	100.00%
Bootstrap support for Q9RTX9 as seed ortholog is 100%.
Bootstrap support for I3EPP3 as seed ortholog is 100%.

Group of orthologs #108. Best score 45 bits
Score difference with first non-orthologous sequence - D.radiodurans:45 N.parisii:45

Q9RS66              	100.00%		I3ET35              	100.00%
Q9RT75              	20.16%		
Q9RS10              	16.45%		
Bootstrap support for Q9RS66 as seed ortholog is 100%.
Bootstrap support for I3ET35 as seed ortholog is 100%.

Group of orthologs #109. Best score 45 bits
Score difference with first non-orthologous sequence - D.radiodurans:45 N.parisii:45

Q9RY40              	100.00%		I3ELA5              	100.00%
Bootstrap support for Q9RY40 as seed ortholog is 100%.
Bootstrap support for I3ELA5 as seed ortholog is 100%.

Group of orthologs #110. Best score 45 bits
Score difference with first non-orthologous sequence - D.radiodurans:45 N.parisii:45

Q9RXK7              	100.00%		I3EMV5              	100.00%
Bootstrap support for Q9RXK7 as seed ortholog is 100%.
Bootstrap support for I3EMV5 as seed ortholog is 100%.

Group of orthologs #111. Best score 45 bits
Score difference with first non-orthologous sequence - D.radiodurans:45 N.parisii:45

Q9RVE9              	100.00%		I3ET21              	100.00%
Bootstrap support for Q9RVE9 as seed ortholog is 100%.
Bootstrap support for I3ET21 as seed ortholog is 100%.

Group of orthologs #112. Best score 44 bits
Score difference with first non-orthologous sequence - D.radiodurans:44 N.parisii:44

Q9RX65              	100.00%		I3ELL2              	100.00%
Q9RY69              	6.37%		
Bootstrap support for Q9RX65 as seed ortholog is 100%.
Bootstrap support for I3ELL2 as seed ortholog is 100%.