###################################
1093 groups of orthologs
1255 in-paralogs from C.variabilis
1163 in-paralogs from P.jiroveci
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
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Group of orthologs #1. Best score 3423 bits
Score difference with first non-orthologous sequence - C.variabilis:3423 P.jiroveci:3423

E1ZPI5              	100.00%		L0PCQ0              	100.00%
Bootstrap support for E1ZPI5 as seed ortholog is 100%.
Bootstrap support for L0PCQ0 as seed ortholog is 100%.

Group of orthologs #2. Best score 1505 bits
Score difference with first non-orthologous sequence - C.variabilis:1505 P.jiroveci:1505

E1Z6L6              	100.00%		L0PHB1              	100.00%
Bootstrap support for E1Z6L6 as seed ortholog is 100%.
Bootstrap support for L0PHB1 as seed ortholog is 100%.

Group of orthologs #3. Best score 1388 bits
Score difference with first non-orthologous sequence - C.variabilis:1388 P.jiroveci:1388

E1ZQ18              	100.00%		L0PBF5              	100.00%
Bootstrap support for E1ZQ18 as seed ortholog is 100%.
Bootstrap support for L0PBF5 as seed ortholog is 100%.

Group of orthologs #4. Best score 1381 bits
Score difference with first non-orthologous sequence - C.variabilis:1381 P.jiroveci:1381

E1ZP27              	100.00%		L0PGJ4              	100.00%
Bootstrap support for E1ZP27 as seed ortholog is 100%.
Bootstrap support for L0PGJ4 as seed ortholog is 100%.

Group of orthologs #5. Best score 1360 bits
Score difference with first non-orthologous sequence - C.variabilis:1360 P.jiroveci:1360

E1Z7G3              	100.00%		L0PG53              	100.00%
Bootstrap support for E1Z7G3 as seed ortholog is 100%.
Bootstrap support for L0PG53 as seed ortholog is 100%.

Group of orthologs #6. Best score 1328 bits
Score difference with first non-orthologous sequence - C.variabilis:1328 P.jiroveci:1328

E1Z4H4              	100.00%		L0P818              	100.00%
Bootstrap support for E1Z4H4 as seed ortholog is 100%.
Bootstrap support for L0P818 as seed ortholog is 100%.

Group of orthologs #7. Best score 1308 bits
Score difference with first non-orthologous sequence - C.variabilis:1308 P.jiroveci:1308

E1ZNR9              	100.00%		L0PD06              	100.00%
Bootstrap support for E1ZNR9 as seed ortholog is 100%.
Bootstrap support for L0PD06 as seed ortholog is 100%.

Group of orthologs #8. Best score 1303 bits
Score difference with first non-orthologous sequence - C.variabilis:557 P.jiroveci:1303

E1ZPD8              	100.00%		L0PG77              	100.00%
Bootstrap support for E1ZPD8 as seed ortholog is 100%.
Bootstrap support for L0PG77 as seed ortholog is 100%.

Group of orthologs #9. Best score 1099 bits
Score difference with first non-orthologous sequence - C.variabilis:1099 P.jiroveci:1099

E1Z4T6              	100.00%		L0PGI2              	100.00%
Bootstrap support for E1Z4T6 as seed ortholog is 100%.
Bootstrap support for L0PGI2 as seed ortholog is 100%.

Group of orthologs #10. Best score 1097 bits
Score difference with first non-orthologous sequence - C.variabilis:1097 P.jiroveci:1097

E1ZQX5              	100.00%		L0PBY6              	100.00%
Bootstrap support for E1ZQX5 as seed ortholog is 100%.
Bootstrap support for L0PBY6 as seed ortholog is 100%.

Group of orthologs #11. Best score 1047 bits
Score difference with first non-orthologous sequence - C.variabilis:778 P.jiroveci:1047

E1Z6R0              	100.00%		L0PDK3              	100.00%
Bootstrap support for E1Z6R0 as seed ortholog is 100%.
Bootstrap support for L0PDK3 as seed ortholog is 100%.

Group of orthologs #12. Best score 1046 bits
Score difference with first non-orthologous sequence - C.variabilis:1046 P.jiroveci:1046

E1Z992              	100.00%		L0PCG8              	100.00%
Bootstrap support for E1Z992 as seed ortholog is 100%.
Bootstrap support for L0PCG8 as seed ortholog is 100%.

Group of orthologs #13. Best score 931 bits
Score difference with first non-orthologous sequence - C.variabilis:118 P.jiroveci:931

E1ZSU9              	100.00%		L0PEW0              	100.00%
Bootstrap support for E1ZSU9 as seed ortholog is 94%.
Bootstrap support for L0PEW0 as seed ortholog is 100%.

Group of orthologs #14. Best score 912 bits
Score difference with first non-orthologous sequence - C.variabilis:367 P.jiroveci:248

E1Z365              	100.00%		L0PFC8              	100.00%
Bootstrap support for E1Z365 as seed ortholog is 100%.
Bootstrap support for L0PFC8 as seed ortholog is 100%.

Group of orthologs #15. Best score 910 bits
Score difference with first non-orthologous sequence - C.variabilis:910 P.jiroveci:910

E1ZN82              	100.00%		L0PFU4              	100.00%
Bootstrap support for E1ZN82 as seed ortholog is 100%.
Bootstrap support for L0PFU4 as seed ortholog is 100%.

Group of orthologs #16. Best score 902 bits
Score difference with first non-orthologous sequence - C.variabilis:902 P.jiroveci:463

E1Z7Y7              	100.00%		L0PG21              	100.00%
Bootstrap support for E1Z7Y7 as seed ortholog is 100%.
Bootstrap support for L0PG21 as seed ortholog is 100%.

Group of orthologs #17. Best score 894 bits
Score difference with first non-orthologous sequence - C.variabilis:318 P.jiroveci:151

E1Z7R4              	100.00%		L0PEK6              	100.00%
E1ZQV2              	30.65%		
Bootstrap support for E1Z7R4 as seed ortholog is 100%.
Bootstrap support for L0PEK6 as seed ortholog is 99%.

Group of orthologs #18. Best score 879 bits
Score difference with first non-orthologous sequence - C.variabilis:879 P.jiroveci:879

E1ZFC8              	100.00%		L0P7V0              	100.00%
Bootstrap support for E1ZFC8 as seed ortholog is 100%.
Bootstrap support for L0P7V0 as seed ortholog is 100%.

Group of orthologs #19. Best score 868 bits
Score difference with first non-orthologous sequence - C.variabilis:868 P.jiroveci:868

E1Z318              	100.00%		L0PGR1              	100.00%
E1ZQU4              	11.69%		
Bootstrap support for E1Z318 as seed ortholog is 100%.
Bootstrap support for L0PGR1 as seed ortholog is 100%.

Group of orthologs #20. Best score 853 bits
Score difference with first non-orthologous sequence - C.variabilis:773 P.jiroveci:853

E1ZQQ7              	100.00%		L0P915              	100.00%
Bootstrap support for E1ZQQ7 as seed ortholog is 100%.
Bootstrap support for L0P915 as seed ortholog is 100%.

Group of orthologs #21. Best score 850 bits
Score difference with first non-orthologous sequence - C.variabilis:850 P.jiroveci:850

E1ZJ65              	100.00%		L0PEQ1              	100.00%
Bootstrap support for E1ZJ65 as seed ortholog is 100%.
Bootstrap support for L0PEQ1 as seed ortholog is 100%.

Group of orthologs #22. Best score 805 bits
Score difference with first non-orthologous sequence - C.variabilis:632 P.jiroveci:713

E1ZGT6              	100.00%		L0PDF8              	100.00%
Bootstrap support for E1ZGT6 as seed ortholog is 100%.
Bootstrap support for L0PDF8 as seed ortholog is 100%.

Group of orthologs #23. Best score 799 bits
Score difference with first non-orthologous sequence - C.variabilis:684 P.jiroveci:649

E1Z4B5              	100.00%		L0PBQ6              	100.00%
Bootstrap support for E1Z4B5 as seed ortholog is 100%.
Bootstrap support for L0PBQ6 as seed ortholog is 100%.

Group of orthologs #24. Best score 781 bits
Score difference with first non-orthologous sequence - C.variabilis:781 P.jiroveci:781

E1ZCY5              	100.00%		L0PCC4              	100.00%
Bootstrap support for E1ZCY5 as seed ortholog is 100%.
Bootstrap support for L0PCC4 as seed ortholog is 100%.

Group of orthologs #25. Best score 778 bits
Score difference with first non-orthologous sequence - C.variabilis:778 P.jiroveci:778

E1ZMJ4              	100.00%		L0P928              	100.00%
Bootstrap support for E1ZMJ4 as seed ortholog is 100%.
Bootstrap support for L0P928 as seed ortholog is 100%.

Group of orthologs #26. Best score 769 bits
Score difference with first non-orthologous sequence - C.variabilis:769 P.jiroveci:769

E1Z5L6              	100.00%		L0PAN4              	100.00%
Bootstrap support for E1Z5L6 as seed ortholog is 100%.
Bootstrap support for L0PAN4 as seed ortholog is 100%.

Group of orthologs #27. Best score 769 bits
Score difference with first non-orthologous sequence - C.variabilis:109 P.jiroveci:226

E1ZMD2              	100.00%		L0PFS2              	100.00%
Bootstrap support for E1ZMD2 as seed ortholog is 99%.
Bootstrap support for L0PFS2 as seed ortholog is 100%.

Group of orthologs #28. Best score 765 bits
Score difference with first non-orthologous sequence - C.variabilis:765 P.jiroveci:765

E1ZT42              	100.00%		L0PH89              	100.00%
Bootstrap support for E1ZT42 as seed ortholog is 100%.
Bootstrap support for L0PH89 as seed ortholog is 100%.

Group of orthologs #29. Best score 763 bits
Score difference with first non-orthologous sequence - C.variabilis:300 P.jiroveci:456

E1Z1Z5              	100.00%		L0PBP8              	100.00%
Bootstrap support for E1Z1Z5 as seed ortholog is 100%.
Bootstrap support for L0PBP8 as seed ortholog is 100%.

Group of orthologs #30. Best score 746 bits
Score difference with first non-orthologous sequence - C.variabilis:120 P.jiroveci:746

E1Z7C9              	100.00%		L0PDB3              	100.00%
Bootstrap support for E1Z7C9 as seed ortholog is 90%.
Bootstrap support for L0PDB3 as seed ortholog is 100%.

Group of orthologs #31. Best score 740 bits
Score difference with first non-orthologous sequence - C.variabilis:740 P.jiroveci:740

E1ZFI8              	100.00%		L0PFF9              	100.00%
Bootstrap support for E1ZFI8 as seed ortholog is 100%.
Bootstrap support for L0PFF9 as seed ortholog is 100%.

Group of orthologs #32. Best score 733 bits
Score difference with first non-orthologous sequence - C.variabilis:733 P.jiroveci:733

E1Z3W6              	100.00%		L0PE96              	100.00%
Bootstrap support for E1Z3W6 as seed ortholog is 100%.
Bootstrap support for L0PE96 as seed ortholog is 100%.

Group of orthologs #33. Best score 717 bits
Score difference with first non-orthologous sequence - C.variabilis:461 P.jiroveci:483

E1ZGE5              	100.00%		L0PBL6              	100.00%
Bootstrap support for E1ZGE5 as seed ortholog is 100%.
Bootstrap support for L0PBL6 as seed ortholog is 100%.

Group of orthologs #34. Best score 717 bits
Score difference with first non-orthologous sequence - C.variabilis:369 P.jiroveci:717

E1ZJM1              	100.00%		L0PBR4              	100.00%
Bootstrap support for E1ZJM1 as seed ortholog is 100%.
Bootstrap support for L0PBR4 as seed ortholog is 100%.

Group of orthologs #35. Best score 715 bits
Score difference with first non-orthologous sequence - C.variabilis:496 P.jiroveci:412

E1Z397              	100.00%		L0PBE4              	100.00%
Bootstrap support for E1Z397 as seed ortholog is 100%.
Bootstrap support for L0PBE4 as seed ortholog is 100%.

Group of orthologs #36. Best score 702 bits
Score difference with first non-orthologous sequence - C.variabilis:364 P.jiroveci:418

E1ZE07              	100.00%		L0PCW9              	100.00%
Bootstrap support for E1ZE07 as seed ortholog is 100%.
Bootstrap support for L0PCW9 as seed ortholog is 100%.

Group of orthologs #37. Best score 696 bits
Score difference with first non-orthologous sequence - C.variabilis:589 P.jiroveci:696

E1Z9W8              	100.00%		L0PEP7              	100.00%
Bootstrap support for E1Z9W8 as seed ortholog is 100%.
Bootstrap support for L0PEP7 as seed ortholog is 100%.

Group of orthologs #38. Best score 692 bits
Score difference with first non-orthologous sequence - C.variabilis:692 P.jiroveci:692

E1ZHR5              	100.00%		L0P7R6              	100.00%
                    	       		L0PHF8              	83.37%
Bootstrap support for E1ZHR5 as seed ortholog is 100%.
Bootstrap support for L0P7R6 as seed ortholog is 100%.

Group of orthologs #39. Best score 673 bits
Score difference with first non-orthologous sequence - C.variabilis:673 P.jiroveci:591

E1Z9V4              	100.00%		L0P7V1              	100.00%
Bootstrap support for E1Z9V4 as seed ortholog is 100%.
Bootstrap support for L0P7V1 as seed ortholog is 100%.

Group of orthologs #40. Best score 673 bits
Score difference with first non-orthologous sequence - C.variabilis:673 P.jiroveci:673

E1Z9K4              	100.00%		L0PBF3              	100.00%
Bootstrap support for E1Z9K4 as seed ortholog is 100%.
Bootstrap support for L0PBF3 as seed ortholog is 100%.

Group of orthologs #41. Best score 669 bits
Score difference with first non-orthologous sequence - C.variabilis:669 P.jiroveci:367

E1ZQ28              	100.00%		L0PA62              	100.00%
Bootstrap support for E1ZQ28 as seed ortholog is 100%.
Bootstrap support for L0PA62 as seed ortholog is 100%.

Group of orthologs #42. Best score 660 bits
Score difference with first non-orthologous sequence - C.variabilis:660 P.jiroveci:660

E1ZN35              	100.00%		L0PBW3              	100.00%
Bootstrap support for E1ZN35 as seed ortholog is 100%.
Bootstrap support for L0PBW3 as seed ortholog is 100%.

Group of orthologs #43. Best score 660 bits
Score difference with first non-orthologous sequence - C.variabilis:451 P.jiroveci:660

E1ZNV9              	100.00%		L0PGA5              	100.00%
Bootstrap support for E1ZNV9 as seed ortholog is 100%.
Bootstrap support for L0PGA5 as seed ortholog is 100%.

Group of orthologs #44. Best score 656 bits
Score difference with first non-orthologous sequence - C.variabilis:498 P.jiroveci:275

E1ZLQ3              	100.00%		L0PA91              	100.00%
Bootstrap support for E1ZLQ3 as seed ortholog is 100%.
Bootstrap support for L0PA91 as seed ortholog is 100%.

Group of orthologs #45. Best score 648 bits
Score difference with first non-orthologous sequence - C.variabilis:71 P.jiroveci:648

E1ZLG3              	100.00%		L0P9C7              	100.00%
E1Z691              	9.57%		
Bootstrap support for E1ZLG3 as seed ortholog is 90%.
Bootstrap support for L0P9C7 as seed ortholog is 100%.

Group of orthologs #46. Best score 646 bits
Score difference with first non-orthologous sequence - C.variabilis:646 P.jiroveci:646

E1ZJQ8              	100.00%		L0P971              	100.00%
Bootstrap support for E1ZJQ8 as seed ortholog is 100%.
Bootstrap support for L0P971 as seed ortholog is 100%.

Group of orthologs #47. Best score 644 bits
Score difference with first non-orthologous sequence - C.variabilis:644 P.jiroveci:644

E1ZGL3              	100.00%		L0P9R9              	100.00%
Bootstrap support for E1ZGL3 as seed ortholog is 100%.
Bootstrap support for L0P9R9 as seed ortholog is 100%.

Group of orthologs #48. Best score 638 bits
Score difference with first non-orthologous sequence - C.variabilis:638 P.jiroveci:638

E1ZH84              	100.00%		L0P8M6              	100.00%
Bootstrap support for E1ZH84 as seed ortholog is 100%.
Bootstrap support for L0P8M6 as seed ortholog is 100%.

Group of orthologs #49. Best score 637 bits
Score difference with first non-orthologous sequence - C.variabilis:472 P.jiroveci:423

E1ZRU9              	100.00%		L0PGL8              	100.00%
Bootstrap support for E1ZRU9 as seed ortholog is 100%.
Bootstrap support for L0PGL8 as seed ortholog is 100%.

Group of orthologs #50. Best score 633 bits
Score difference with first non-orthologous sequence - C.variabilis:633 P.jiroveci:633

E1ZG37              	100.00%		L0PAV3              	100.00%
Bootstrap support for E1ZG37 as seed ortholog is 100%.
Bootstrap support for L0PAV3 as seed ortholog is 100%.

Group of orthologs #51. Best score 633 bits
Score difference with first non-orthologous sequence - C.variabilis:323 P.jiroveci:633

E1ZFR6              	100.00%		L0PC37              	100.00%
Bootstrap support for E1ZFR6 as seed ortholog is 99%.
Bootstrap support for L0PC37 as seed ortholog is 100%.

Group of orthologs #52. Best score 632 bits
Score difference with first non-orthologous sequence - C.variabilis:632 P.jiroveci:632

E1ZPY8              	100.00%		L0P7C3              	100.00%
Bootstrap support for E1ZPY8 as seed ortholog is 100%.
Bootstrap support for L0P7C3 as seed ortholog is 100%.

Group of orthologs #53. Best score 629 bits
Score difference with first non-orthologous sequence - C.variabilis:393 P.jiroveci:629

E1ZGA1              	100.00%		L0P945              	100.00%
Bootstrap support for E1ZGA1 as seed ortholog is 100%.
Bootstrap support for L0P945 as seed ortholog is 100%.

Group of orthologs #54. Best score 625 bits
Score difference with first non-orthologous sequence - C.variabilis:405 P.jiroveci:625

E1Z9V3              	100.00%		L0P976              	100.00%
Bootstrap support for E1Z9V3 as seed ortholog is 100%.
Bootstrap support for L0P976 as seed ortholog is 100%.

Group of orthologs #55. Best score 624 bits
Score difference with first non-orthologous sequence - C.variabilis:439 P.jiroveci:624

E1ZFE4              	100.00%		L0PER6              	100.00%
Bootstrap support for E1ZFE4 as seed ortholog is 100%.
Bootstrap support for L0PER6 as seed ortholog is 100%.

Group of orthologs #56. Best score 619 bits
Score difference with first non-orthologous sequence - C.variabilis:619 P.jiroveci:619

E1Z4W2              	100.00%		L0P7L0              	100.00%
                    	       		L0PCI7              	43.34%
Bootstrap support for E1Z4W2 as seed ortholog is 100%.
Bootstrap support for L0P7L0 as seed ortholog is 100%.

Group of orthologs #57. Best score 618 bits
Score difference with first non-orthologous sequence - C.variabilis:618 P.jiroveci:618

E1ZPY4              	100.00%		L0PC65              	100.00%
Bootstrap support for E1ZPY4 as seed ortholog is 100%.
Bootstrap support for L0PC65 as seed ortholog is 100%.

Group of orthologs #58. Best score 613 bits
Score difference with first non-orthologous sequence - C.variabilis:613 P.jiroveci:613

E1Z3L7              	100.00%		L0PEK9              	100.00%
Bootstrap support for E1Z3L7 as seed ortholog is 100%.
Bootstrap support for L0PEK9 as seed ortholog is 100%.

Group of orthologs #59. Best score 611 bits
Score difference with first non-orthologous sequence - C.variabilis:611 P.jiroveci:611

E1ZIF0              	100.00%		L0PA41              	100.00%
Bootstrap support for E1ZIF0 as seed ortholog is 100%.
Bootstrap support for L0PA41 as seed ortholog is 100%.

Group of orthologs #60. Best score 610 bits
Score difference with first non-orthologous sequence - C.variabilis:610 P.jiroveci:610

E1Z3X6              	100.00%		L0PCR2              	100.00%
Bootstrap support for E1Z3X6 as seed ortholog is 100%.
Bootstrap support for L0PCR2 as seed ortholog is 100%.

Group of orthologs #61. Best score 606 bits
Score difference with first non-orthologous sequence - C.variabilis:606 P.jiroveci:606

E1ZKI8              	100.00%		L0P773              	100.00%
Bootstrap support for E1ZKI8 as seed ortholog is 100%.
Bootstrap support for L0P773 as seed ortholog is 100%.

Group of orthologs #62. Best score 605 bits
Score difference with first non-orthologous sequence - C.variabilis:275 P.jiroveci:391

E1Z935              	100.00%		L0P8E7              	100.00%
Bootstrap support for E1Z935 as seed ortholog is 100%.
Bootstrap support for L0P8E7 as seed ortholog is 100%.

Group of orthologs #63. Best score 604 bits
Score difference with first non-orthologous sequence - C.variabilis:604 P.jiroveci:604

E1ZAL3              	100.00%		L0PGR4              	100.00%
                    	       		L0PFQ2              	93.54%
Bootstrap support for E1ZAL3 as seed ortholog is 100%.
Bootstrap support for L0PGR4 as seed ortholog is 100%.

Group of orthologs #64. Best score 600 bits
Score difference with first non-orthologous sequence - C.variabilis:384 P.jiroveci:600

E1ZLA6              	100.00%		L0PG45              	100.00%
Bootstrap support for E1ZLA6 as seed ortholog is 100%.
Bootstrap support for L0PG45 as seed ortholog is 100%.

Group of orthologs #65. Best score 592 bits
Score difference with first non-orthologous sequence - C.variabilis:432 P.jiroveci:592

E1ZBA9              	100.00%		L0PGS4              	100.00%
Bootstrap support for E1ZBA9 as seed ortholog is 100%.
Bootstrap support for L0PGS4 as seed ortholog is 100%.

Group of orthologs #66. Best score 591 bits
Score difference with first non-orthologous sequence - C.variabilis:591 P.jiroveci:591

E1Z6P2              	100.00%		L0PDK6              	100.00%
Bootstrap support for E1Z6P2 as seed ortholog is 100%.
Bootstrap support for L0PDK6 as seed ortholog is 100%.

Group of orthologs #67. Best score 589 bits
Score difference with first non-orthologous sequence - C.variabilis:589 P.jiroveci:589

E1ZH13              	100.00%		L0PEU6              	100.00%
Bootstrap support for E1ZH13 as seed ortholog is 100%.
Bootstrap support for L0PEU6 as seed ortholog is 100%.

Group of orthologs #68. Best score 584 bits
Score difference with first non-orthologous sequence - C.variabilis:77 P.jiroveci:319

E1Z9M4              	100.00%		L0PFW1              	100.00%
E1ZTD2              	63.38%		
Bootstrap support for E1Z9M4 as seed ortholog is 94%.
Bootstrap support for L0PFW1 as seed ortholog is 100%.

Group of orthologs #69. Best score 582 bits
Score difference with first non-orthologous sequence - C.variabilis:582 P.jiroveci:582

E1ZAA5              	100.00%		L0PC54              	100.00%
Bootstrap support for E1ZAA5 as seed ortholog is 100%.
Bootstrap support for L0PC54 as seed ortholog is 100%.

Group of orthologs #70. Best score 582 bits
Score difference with first non-orthologous sequence - C.variabilis:434 P.jiroveci:450

E1ZPH9              	100.00%		L0PCD8              	100.00%
Bootstrap support for E1ZPH9 as seed ortholog is 100%.
Bootstrap support for L0PCD8 as seed ortholog is 100%.

Group of orthologs #71. Best score 578 bits
Score difference with first non-orthologous sequence - C.variabilis:578 P.jiroveci:578

F2YGQ9              	100.00%		L0P833              	100.00%
                    	       		L0P765              	6.98%
Bootstrap support for F2YGQ9 as seed ortholog is 100%.
Bootstrap support for L0P833 as seed ortholog is 100%.

Group of orthologs #72. Best score 577 bits
Score difference with first non-orthologous sequence - C.variabilis:443 P.jiroveci:511

E1Z9W3              	100.00%		L0PBW1              	100.00%
Bootstrap support for E1Z9W3 as seed ortholog is 100%.
Bootstrap support for L0PBW1 as seed ortholog is 100%.

Group of orthologs #73. Best score 576 bits
Score difference with first non-orthologous sequence - C.variabilis:480 P.jiroveci:298

E1ZKU2              	100.00%		L0PBV5              	100.00%
Bootstrap support for E1ZKU2 as seed ortholog is 100%.
Bootstrap support for L0PBV5 as seed ortholog is 100%.

Group of orthologs #74. Best score 571 bits
Score difference with first non-orthologous sequence - C.variabilis:571 P.jiroveci:571

E1ZQU7              	100.00%		L0P8W6              	100.00%
Bootstrap support for E1ZQU7 as seed ortholog is 100%.
Bootstrap support for L0P8W6 as seed ortholog is 100%.

Group of orthologs #75. Best score 568 bits
Score difference with first non-orthologous sequence - C.variabilis:568 P.jiroveci:568

E1Z2U6              	100.00%		L0PFF6              	100.00%
E1ZQ93              	35.89%		
E1ZND4              	30.07%		
Bootstrap support for E1Z2U6 as seed ortholog is 100%.
Bootstrap support for L0PFF6 as seed ortholog is 100%.

Group of orthologs #76. Best score 562 bits
Score difference with first non-orthologous sequence - C.variabilis:562 P.jiroveci:514

E1ZQ58              	100.00%		L0P802              	100.00%
Bootstrap support for E1ZQ58 as seed ortholog is 100%.
Bootstrap support for L0P802 as seed ortholog is 100%.

Group of orthologs #77. Best score 555 bits
Score difference with first non-orthologous sequence - C.variabilis:78 P.jiroveci:555

E1Z751              	100.00%		L0PGU1              	100.00%
Bootstrap support for E1Z751 as seed ortholog is 86%.
Bootstrap support for L0PGU1 as seed ortholog is 100%.

Group of orthologs #78. Best score 552 bits
Score difference with first non-orthologous sequence - C.variabilis:335 P.jiroveci:173

E1ZQU8              	100.00%		L0PBH4              	100.00%
Bootstrap support for E1ZQU8 as seed ortholog is 100%.
Bootstrap support for L0PBH4 as seed ortholog is 100%.

Group of orthologs #79. Best score 548 bits
Score difference with first non-orthologous sequence - C.variabilis:548 P.jiroveci:327

E1Z385              	100.00%		L0PCT0              	100.00%
Bootstrap support for E1Z385 as seed ortholog is 100%.
Bootstrap support for L0PCT0 as seed ortholog is 100%.

Group of orthologs #80. Best score 546 bits
Score difference with first non-orthologous sequence - C.variabilis:546 P.jiroveci:546

E1ZGA8              	100.00%		L0PFJ0              	100.00%
Bootstrap support for E1ZGA8 as seed ortholog is 100%.
Bootstrap support for L0PFJ0 as seed ortholog is 100%.

Group of orthologs #81. Best score 543 bits
Score difference with first non-orthologous sequence - C.variabilis:319 P.jiroveci:543

E1Z269              	100.00%		L0PAR0              	100.00%
Bootstrap support for E1Z269 as seed ortholog is 100%.
Bootstrap support for L0PAR0 as seed ortholog is 100%.

Group of orthologs #82. Best score 542 bits
Score difference with first non-orthologous sequence - C.variabilis:542 P.jiroveci:501

E1Z5J6              	100.00%		L0PES7              	100.00%
Bootstrap support for E1Z5J6 as seed ortholog is 100%.
Bootstrap support for L0PES7 as seed ortholog is 100%.

Group of orthologs #83. Best score 541 bits
Score difference with first non-orthologous sequence - C.variabilis:476 P.jiroveci:541

E1ZGR1              	100.00%		L0PF66              	100.00%
Bootstrap support for E1ZGR1 as seed ortholog is 100%.
Bootstrap support for L0PF66 as seed ortholog is 100%.

Group of orthologs #84. Best score 537 bits
Score difference with first non-orthologous sequence - C.variabilis:537 P.jiroveci:537

E1ZD41              	100.00%		L0P9D4              	100.00%
Bootstrap support for E1ZD41 as seed ortholog is 100%.
Bootstrap support for L0P9D4 as seed ortholog is 100%.

Group of orthologs #85. Best score 535 bits
Score difference with first non-orthologous sequence - C.variabilis:535 P.jiroveci:535

E1ZDA6              	100.00%		L0P7V2              	100.00%
Bootstrap support for E1ZDA6 as seed ortholog is 100%.
Bootstrap support for L0P7V2 as seed ortholog is 100%.

Group of orthologs #86. Best score 531 bits
Score difference with first non-orthologous sequence - C.variabilis:360 P.jiroveci:179

E1Z283              	100.00%		L0P7D9              	100.00%
Bootstrap support for E1Z283 as seed ortholog is 100%.
Bootstrap support for L0P7D9 as seed ortholog is 100%.

Group of orthologs #87. Best score 531 bits
Score difference with first non-orthologous sequence - C.variabilis:531 P.jiroveci:531

E1ZA42              	100.00%		L0PC79              	100.00%
Bootstrap support for E1ZA42 as seed ortholog is 100%.
Bootstrap support for L0PC79 as seed ortholog is 100%.

Group of orthologs #88. Best score 529 bits
Score difference with first non-orthologous sequence - C.variabilis:529 P.jiroveci:166

E1Z750              	100.00%		L0PG61              	100.00%
                    	       		L0PAC9              	7.02%
Bootstrap support for E1Z750 as seed ortholog is 100%.
Bootstrap support for L0PG61 as seed ortholog is 99%.

Group of orthologs #89. Best score 527 bits
Score difference with first non-orthologous sequence - C.variabilis:329 P.jiroveci:332

E1Z284              	100.00%		L0PC64              	100.00%
Bootstrap support for E1Z284 as seed ortholog is 100%.
Bootstrap support for L0PC64 as seed ortholog is 100%.

Group of orthologs #90. Best score 521 bits
Score difference with first non-orthologous sequence - C.variabilis:521 P.jiroveci:274

E1Z937              	100.00%		L0PD31              	100.00%
Bootstrap support for E1Z937 as seed ortholog is 100%.
Bootstrap support for L0PD31 as seed ortholog is 100%.

Group of orthologs #91. Best score 520 bits
Score difference with first non-orthologous sequence - C.variabilis:378 P.jiroveci:520

E1Z3T9              	100.00%		L0PGT9              	100.00%
Bootstrap support for E1Z3T9 as seed ortholog is 100%.
Bootstrap support for L0PGT9 as seed ortholog is 100%.

Group of orthologs #92. Best score 520 bits
Score difference with first non-orthologous sequence - C.variabilis:520 P.jiroveci:200

E1ZPD1              	100.00%		L0P9U5              	100.00%
Bootstrap support for E1ZPD1 as seed ortholog is 100%.
Bootstrap support for L0P9U5 as seed ortholog is 99%.

Group of orthologs #93. Best score 519 bits
Score difference with first non-orthologous sequence - C.variabilis:95 P.jiroveci:519

E1Z7T6              	100.00%		L0PCP1              	100.00%
Bootstrap support for E1Z7T6 as seed ortholog is 83%.
Bootstrap support for L0PCP1 as seed ortholog is 100%.

Group of orthologs #94. Best score 519 bits
Score difference with first non-orthologous sequence - C.variabilis:282 P.jiroveci:519

E1ZQV8              	100.00%		L0P7Y5              	100.00%
Bootstrap support for E1ZQV8 as seed ortholog is 100%.
Bootstrap support for L0P7Y5 as seed ortholog is 100%.

Group of orthologs #95. Best score 518 bits
Score difference with first non-orthologous sequence - C.variabilis:333 P.jiroveci:315

E1ZM95              	100.00%		L0P7V6              	100.00%
Bootstrap support for E1ZM95 as seed ortholog is 100%.
Bootstrap support for L0P7V6 as seed ortholog is 100%.

Group of orthologs #96. Best score 518 bits
Score difference with first non-orthologous sequence - C.variabilis:205 P.jiroveci:303

E1ZJL1              	100.00%		L0PDY0              	100.00%
Bootstrap support for E1ZJL1 as seed ortholog is 99%.
Bootstrap support for L0PDY0 as seed ortholog is 100%.

Group of orthologs #97. Best score 518 bits
Score difference with first non-orthologous sequence - C.variabilis:518 P.jiroveci:518

E1ZTL2              	100.00%		L0PBQ4              	100.00%
Bootstrap support for E1ZTL2 as seed ortholog is 100%.
Bootstrap support for L0PBQ4 as seed ortholog is 100%.

Group of orthologs #98. Best score 515 bits
Score difference with first non-orthologous sequence - C.variabilis:515 P.jiroveci:515

E1ZPE2              	100.00%		L0PAX4              	100.00%
Bootstrap support for E1ZPE2 as seed ortholog is 100%.
Bootstrap support for L0PAX4 as seed ortholog is 100%.

Group of orthologs #99. Best score 510 bits
Score difference with first non-orthologous sequence - C.variabilis:346 P.jiroveci:168

E1ZQ40              	100.00%		L0P890              	100.00%
Bootstrap support for E1ZQ40 as seed ortholog is 100%.
Bootstrap support for L0P890 as seed ortholog is 100%.

Group of orthologs #100. Best score 508 bits
Score difference with first non-orthologous sequence - C.variabilis:319 P.jiroveci:325

E1Z973              	100.00%		L0P853              	100.00%
                    	       		L0P8M8              	63.10%
Bootstrap support for E1Z973 as seed ortholog is 100%.
Bootstrap support for L0P853 as seed ortholog is 100%.

Group of orthologs #101. Best score 505 bits
Score difference with first non-orthologous sequence - C.variabilis:389 P.jiroveci:382

E1ZRP6              	100.00%		L0PE30              	100.00%
Bootstrap support for E1ZRP6 as seed ortholog is 100%.
Bootstrap support for L0PE30 as seed ortholog is 100%.

Group of orthologs #102. Best score 496 bits
Score difference with first non-orthologous sequence - C.variabilis:104 P.jiroveci:496

E1ZRQ6              	100.00%		L0PDM6              	100.00%
Bootstrap support for E1ZRQ6 as seed ortholog is 98%.
Bootstrap support for L0PDM6 as seed ortholog is 100%.

Group of orthologs #103. Best score 493 bits
Score difference with first non-orthologous sequence - C.variabilis:493 P.jiroveci:493

E1ZKH5              	100.00%		L0PDR3              	100.00%
Bootstrap support for E1ZKH5 as seed ortholog is 100%.
Bootstrap support for L0PDR3 as seed ortholog is 100%.

Group of orthologs #104. Best score 490 bits
Score difference with first non-orthologous sequence - C.variabilis:273 P.jiroveci:490

E1ZQM9              	100.00%		L0P9I8              	100.00%
Bootstrap support for E1ZQM9 as seed ortholog is 100%.
Bootstrap support for L0P9I8 as seed ortholog is 100%.

Group of orthologs #105. Best score 488 bits
Score difference with first non-orthologous sequence - C.variabilis:370 P.jiroveci:488

F2YGM8              	100.00%		L0P9G2              	100.00%
E1Z696              	9.54%		
Bootstrap support for F2YGM8 as seed ortholog is 100%.
Bootstrap support for L0P9G2 as seed ortholog is 100%.

Group of orthologs #106. Best score 487 bits
Score difference with first non-orthologous sequence - C.variabilis:487 P.jiroveci:487

E1Z5G6              	100.00%		L0PA45              	100.00%
Bootstrap support for E1Z5G6 as seed ortholog is 100%.
Bootstrap support for L0PA45 as seed ortholog is 100%.

Group of orthologs #107. Best score 487 bits
Score difference with first non-orthologous sequence - C.variabilis:487 P.jiroveci:487

E1ZSI5              	100.00%		L0PDJ1              	100.00%
Bootstrap support for E1ZSI5 as seed ortholog is 100%.
Bootstrap support for L0PDJ1 as seed ortholog is 100%.

Group of orthologs #108. Best score 486 bits
Score difference with first non-orthologous sequence - C.variabilis:127 P.jiroveci:486

E1Z5A3              	100.00%		L0P9P7              	100.00%
Bootstrap support for E1Z5A3 as seed ortholog is 97%.
Bootstrap support for L0P9P7 as seed ortholog is 100%.

Group of orthologs #109. Best score 483 bits
Score difference with first non-orthologous sequence - C.variabilis:483 P.jiroveci:303

E1Z644              	100.00%		L0PG32              	100.00%
Bootstrap support for E1Z644 as seed ortholog is 100%.
Bootstrap support for L0PG32 as seed ortholog is 100%.

Group of orthologs #110. Best score 481 bits
Score difference with first non-orthologous sequence - C.variabilis:427 P.jiroveci:231

E1Z7N5              	100.00%		L0PCS2              	100.00%
Bootstrap support for E1Z7N5 as seed ortholog is 100%.
Bootstrap support for L0PCS2 as seed ortholog is 99%.

Group of orthologs #111. Best score 480 bits
Score difference with first non-orthologous sequence - C.variabilis:396 P.jiroveci:480

E1Z6P3              	100.00%		L0PA75              	100.00%
Bootstrap support for E1Z6P3 as seed ortholog is 100%.
Bootstrap support for L0PA75 as seed ortholog is 100%.

Group of orthologs #112. Best score 480 bits
Score difference with first non-orthologous sequence - C.variabilis:166 P.jiroveci:480

E1ZLL0              	100.00%		L0PF72              	100.00%
Bootstrap support for E1ZLL0 as seed ortholog is 99%.
Bootstrap support for L0PF72 as seed ortholog is 100%.

Group of orthologs #113. Best score 477 bits
Score difference with first non-orthologous sequence - C.variabilis:477 P.jiroveci:477

E1ZQW5              	100.00%		L0PB97              	100.00%
Bootstrap support for E1ZQW5 as seed ortholog is 100%.
Bootstrap support for L0PB97 as seed ortholog is 100%.

Group of orthologs #114. Best score 476 bits
Score difference with first non-orthologous sequence - C.variabilis:476 P.jiroveci:476

E1Z3F6              	100.00%		L0PCX1              	100.00%
Bootstrap support for E1Z3F6 as seed ortholog is 100%.
Bootstrap support for L0PCX1 as seed ortholog is 100%.

Group of orthologs #115. Best score 473 bits
Score difference with first non-orthologous sequence - C.variabilis:125 P.jiroveci:473

E1ZA16              	100.00%		L0P905              	100.00%
E1ZN95              	5.03%		
Bootstrap support for E1ZA16 as seed ortholog is 96%.
Bootstrap support for L0P905 as seed ortholog is 100%.

Group of orthologs #116. Best score 471 bits
Score difference with first non-orthologous sequence - C.variabilis:287 P.jiroveci:471

E1ZRR8              	100.00%		L0P6Y2              	100.00%
Bootstrap support for E1ZRR8 as seed ortholog is 100%.
Bootstrap support for L0P6Y2 as seed ortholog is 100%.

Group of orthologs #117. Best score 470 bits
Score difference with first non-orthologous sequence - C.variabilis:470 P.jiroveci:470

E1ZAN0              	100.00%		L0P7X5              	100.00%
Bootstrap support for E1ZAN0 as seed ortholog is 100%.
Bootstrap support for L0P7X5 as seed ortholog is 100%.

Group of orthologs #118. Best score 464 bits
Score difference with first non-orthologous sequence - C.variabilis:464 P.jiroveci:464

E1Z3S9              	100.00%		L0P7N1              	100.00%
Bootstrap support for E1Z3S9 as seed ortholog is 100%.
Bootstrap support for L0P7N1 as seed ortholog is 100%.

Group of orthologs #119. Best score 464 bits
Score difference with first non-orthologous sequence - C.variabilis:464 P.jiroveci:464

E1ZSK4              	100.00%		L0PCV7              	100.00%
Bootstrap support for E1ZSK4 as seed ortholog is 100%.
Bootstrap support for L0PCV7 as seed ortholog is 100%.

Group of orthologs #120. Best score 463 bits
Score difference with first non-orthologous sequence - C.variabilis:36 P.jiroveci:149

E1ZG34              	100.00%		L0PCK5              	100.00%
                    	       		L0PGY9              	9.97%
Bootstrap support for E1ZG34 as seed ortholog is 84%.
Bootstrap support for L0PCK5 as seed ortholog is 99%.

Group of orthologs #121. Best score 460 bits
Score difference with first non-orthologous sequence - C.variabilis:460 P.jiroveci:460

E1ZNZ5              	100.00%		L0P7T0              	100.00%
Bootstrap support for E1ZNZ5 as seed ortholog is 100%.
Bootstrap support for L0P7T0 as seed ortholog is 100%.

Group of orthologs #122. Best score 459 bits
Score difference with first non-orthologous sequence - C.variabilis:459 P.jiroveci:459

E1ZQR3              	100.00%		L0P6R7              	100.00%
Bootstrap support for E1ZQR3 as seed ortholog is 100%.
Bootstrap support for L0P6R7 as seed ortholog is 100%.

Group of orthologs #123. Best score 454 bits
Score difference with first non-orthologous sequence - C.variabilis:454 P.jiroveci:454

E1Z8B3              	100.00%		L0PB50              	100.00%
Bootstrap support for E1Z8B3 as seed ortholog is 100%.
Bootstrap support for L0PB50 as seed ortholog is 100%.

Group of orthologs #124. Best score 454 bits
Score difference with first non-orthologous sequence - C.variabilis:454 P.jiroveci:454

E1ZIW7              	100.00%		L0PDU5              	100.00%
Bootstrap support for E1ZIW7 as seed ortholog is 100%.
Bootstrap support for L0PDU5 as seed ortholog is 100%.

Group of orthologs #125. Best score 452 bits
Score difference with first non-orthologous sequence - C.variabilis:452 P.jiroveci:145

E1ZS85              	100.00%		L0P6X8              	100.00%
Bootstrap support for E1ZS85 as seed ortholog is 100%.
Bootstrap support for L0P6X8 as seed ortholog is 99%.

Group of orthologs #126. Best score 451 bits
Score difference with first non-orthologous sequence - C.variabilis:248 P.jiroveci:211

E1ZGI3              	100.00%		L0PBI1              	100.00%
Bootstrap support for E1ZGI3 as seed ortholog is 100%.
Bootstrap support for L0PBI1 as seed ortholog is 100%.

Group of orthologs #127. Best score 451 bits
Score difference with first non-orthologous sequence - C.variabilis:451 P.jiroveci:374

E1ZFY2              	100.00%		L0PG55              	100.00%
Bootstrap support for E1ZFY2 as seed ortholog is 100%.
Bootstrap support for L0PG55 as seed ortholog is 100%.

Group of orthologs #128. Best score 449 bits
Score difference with first non-orthologous sequence - C.variabilis:449 P.jiroveci:449

E1ZGJ2              	100.00%		L0PB35              	100.00%
Bootstrap support for E1ZGJ2 as seed ortholog is 100%.
Bootstrap support for L0PB35 as seed ortholog is 100%.

Group of orthologs #129. Best score 447 bits
Score difference with first non-orthologous sequence - C.variabilis:87 P.jiroveci:447

E1ZNE0              	100.00%		L0P9A8              	100.00%
E1ZIU0              	9.78%		L0PHB9              	100.00%
Bootstrap support for E1ZNE0 as seed ortholog is 95%.
Bootstrap support for L0P9A8 as seed ortholog is 100%.
Bootstrap support for L0PHB9 as seed ortholog is 100%.

Group of orthologs #130. Best score 446 bits
Score difference with first non-orthologous sequence - C.variabilis:333 P.jiroveci:446

E1Z576              	100.00%		L0PET9              	100.00%
Bootstrap support for E1Z576 as seed ortholog is 100%.
Bootstrap support for L0PET9 as seed ortholog is 100%.

Group of orthologs #131. Best score 446 bits
Score difference with first non-orthologous sequence - C.variabilis:446 P.jiroveci:446

E1Z7M5              	100.00%		L0PED9              	100.00%
Bootstrap support for E1Z7M5 as seed ortholog is 100%.
Bootstrap support for L0PED9 as seed ortholog is 100%.

Group of orthologs #132. Best score 446 bits
Score difference with first non-orthologous sequence - C.variabilis:446 P.jiroveci:446

E1ZPK6              	100.00%		L0PF80              	100.00%
Bootstrap support for E1ZPK6 as seed ortholog is 100%.
Bootstrap support for L0PF80 as seed ortholog is 100%.

Group of orthologs #133. Best score 445 bits
Score difference with first non-orthologous sequence - C.variabilis:445 P.jiroveci:337

E1ZQ02              	100.00%		L0PA93              	100.00%
Bootstrap support for E1ZQ02 as seed ortholog is 100%.
Bootstrap support for L0PA93 as seed ortholog is 100%.

Group of orthologs #134. Best score 442 bits
Score difference with first non-orthologous sequence - C.variabilis:442 P.jiroveci:442

E1ZT55              	100.00%		L0PBD7              	100.00%
Bootstrap support for E1ZT55 as seed ortholog is 100%.
Bootstrap support for L0PBD7 as seed ortholog is 100%.

Group of orthologs #135. Best score 442 bits
Score difference with first non-orthologous sequence - C.variabilis:277 P.jiroveci:80

E1ZRE4              	100.00%		L0PFW2              	100.00%
Bootstrap support for E1ZRE4 as seed ortholog is 100%.
Bootstrap support for L0PFW2 as seed ortholog is 98%.

Group of orthologs #136. Best score 438 bits
Score difference with first non-orthologous sequence - C.variabilis:314 P.jiroveci:438

E1ZB26              	100.00%		L0PBG8              	100.00%
E1ZSI1              	6.95%		
Bootstrap support for E1ZB26 as seed ortholog is 100%.
Bootstrap support for L0PBG8 as seed ortholog is 100%.

Group of orthologs #137. Best score 438 bits
Score difference with first non-orthologous sequence - C.variabilis:438 P.jiroveci:438

E1ZF72              	100.00%		L0PBJ1              	100.00%
Bootstrap support for E1ZF72 as seed ortholog is 100%.
Bootstrap support for L0PBJ1 as seed ortholog is 100%.

Group of orthologs #138. Best score 438 bits
Score difference with first non-orthologous sequence - C.variabilis:277 P.jiroveci:116

E1ZQV1              	100.00%		L0PFS3              	100.00%
Bootstrap support for E1ZQV1 as seed ortholog is 100%.
Bootstrap support for L0PFS3 as seed ortholog is 99%.

Group of orthologs #139. Best score 435 bits
Score difference with first non-orthologous sequence - C.variabilis:194 P.jiroveci:282

E1ZSH5              	100.00%		L0PGZ9              	100.00%
Bootstrap support for E1ZSH5 as seed ortholog is 99%.
Bootstrap support for L0PGZ9 as seed ortholog is 99%.

Group of orthologs #140. Best score 433 bits
Score difference with first non-orthologous sequence - C.variabilis:433 P.jiroveci:433

E1Z3F5              	100.00%		L0P8X3              	100.00%
Bootstrap support for E1Z3F5 as seed ortholog is 100%.
Bootstrap support for L0P8X3 as seed ortholog is 100%.

Group of orthologs #141. Best score 433 bits
Score difference with first non-orthologous sequence - C.variabilis:433 P.jiroveci:433

E1Z9K0              	100.00%		L0P9C1              	100.00%
Bootstrap support for E1Z9K0 as seed ortholog is 100%.
Bootstrap support for L0P9C1 as seed ortholog is 100%.

Group of orthologs #142. Best score 432 bits
Score difference with first non-orthologous sequence - C.variabilis:432 P.jiroveci:432

E1ZE06              	100.00%		L0PBR9              	100.00%
Bootstrap support for E1ZE06 as seed ortholog is 100%.
Bootstrap support for L0PBR9 as seed ortholog is 100%.

Group of orthologs #143. Best score 431 bits
Score difference with first non-orthologous sequence - C.variabilis:431 P.jiroveci:431

E1ZD62              	100.00%		L0PAQ1              	100.00%
Bootstrap support for E1ZD62 as seed ortholog is 100%.
Bootstrap support for L0PAQ1 as seed ortholog is 100%.

Group of orthologs #144. Best score 431 bits
Score difference with first non-orthologous sequence - C.variabilis:320 P.jiroveci:334

E1ZQR9              	100.00%		L0P8C2              	100.00%
Bootstrap support for E1ZQR9 as seed ortholog is 100%.
Bootstrap support for L0P8C2 as seed ortholog is 100%.

Group of orthologs #145. Best score 427 bits
Score difference with first non-orthologous sequence - C.variabilis:427 P.jiroveci:427

E1Z229              	100.00%		L0PG37              	100.00%
Bootstrap support for E1Z229 as seed ortholog is 100%.
Bootstrap support for L0PG37 as seed ortholog is 100%.

Group of orthologs #146. Best score 426 bits
Score difference with first non-orthologous sequence - C.variabilis:263 P.jiroveci:426

E1ZH62              	100.00%		L0P992              	100.00%
Bootstrap support for E1ZH62 as seed ortholog is 100%.
Bootstrap support for L0P992 as seed ortholog is 100%.

Group of orthologs #147. Best score 426 bits
Score difference with first non-orthologous sequence - C.variabilis:426 P.jiroveci:426

E1ZT56              	100.00%		L0PDM3              	100.00%
Bootstrap support for E1ZT56 as seed ortholog is 100%.
Bootstrap support for L0PDM3 as seed ortholog is 100%.

Group of orthologs #148. Best score 425 bits
Score difference with first non-orthologous sequence - C.variabilis:255 P.jiroveci:425

E1ZJC4              	100.00%		L0PFN9              	100.00%
                    	       		L0PEF0              	6.96%
Bootstrap support for E1ZJC4 as seed ortholog is 100%.
Bootstrap support for L0PFN9 as seed ortholog is 100%.

Group of orthologs #149. Best score 424 bits
Score difference with first non-orthologous sequence - C.variabilis:424 P.jiroveci:424

E1Z638              	100.00%		L0P9J7              	100.00%
Bootstrap support for E1Z638 as seed ortholog is 100%.
Bootstrap support for L0P9J7 as seed ortholog is 100%.

Group of orthologs #150. Best score 420 bits
Score difference with first non-orthologous sequence - C.variabilis:420 P.jiroveci:420

E1ZA66              	100.00%		L0PDQ4              	100.00%
Bootstrap support for E1ZA66 as seed ortholog is 100%.
Bootstrap support for L0PDQ4 as seed ortholog is 100%.

Group of orthologs #151. Best score 418 bits
Score difference with first non-orthologous sequence - C.variabilis:290 P.jiroveci:418

E1ZLJ3              	100.00%		L0PCY5              	100.00%
Bootstrap support for E1ZLJ3 as seed ortholog is 100%.
Bootstrap support for L0PCY5 as seed ortholog is 100%.

Group of orthologs #152. Best score 417 bits
Score difference with first non-orthologous sequence - C.variabilis:417 P.jiroveci:417

E1ZQD0              	100.00%		L0PBY5              	100.00%
Bootstrap support for E1ZQD0 as seed ortholog is 100%.
Bootstrap support for L0PBY5 as seed ortholog is 100%.

Group of orthologs #153. Best score 416 bits
Score difference with first non-orthologous sequence - C.variabilis:416 P.jiroveci:416

E1ZMM5              	100.00%		L0P7N3              	100.00%
Bootstrap support for E1ZMM5 as seed ortholog is 100%.
Bootstrap support for L0P7N3 as seed ortholog is 100%.

Group of orthologs #154. Best score 415 bits
Score difference with first non-orthologous sequence - C.variabilis:415 P.jiroveci:415

F2YGR0              	100.00%		L0PDC9              	100.00%
E1ZS63              	15.40%		
Bootstrap support for F2YGR0 as seed ortholog is 100%.
Bootstrap support for L0PDC9 as seed ortholog is 100%.

Group of orthologs #155. Best score 414 bits
Score difference with first non-orthologous sequence - C.variabilis:259 P.jiroveci:414

E1Z6D9              	100.00%		L0P8N1              	100.00%
Bootstrap support for E1Z6D9 as seed ortholog is 100%.
Bootstrap support for L0P8N1 as seed ortholog is 100%.

Group of orthologs #156. Best score 414 bits
Score difference with first non-orthologous sequence - C.variabilis:414 P.jiroveci:414

E1ZKL7              	100.00%		L0PG48              	100.00%
Bootstrap support for E1ZKL7 as seed ortholog is 100%.
Bootstrap support for L0PG48 as seed ortholog is 100%.

Group of orthologs #157. Best score 413 bits
Score difference with first non-orthologous sequence - C.variabilis:413 P.jiroveci:48

E1ZIC7              	100.00%		L0PAS3              	100.00%
Bootstrap support for E1ZIC7 as seed ortholog is 100%.
Bootstrap support for L0PAS3 as seed ortholog is 72%.
Alternative seed ortholog is L0P9V7 (48 bits away from this cluster)

Group of orthologs #158. Best score 412 bits
Score difference with first non-orthologous sequence - C.variabilis:412 P.jiroveci:412

E1Z5B1              	100.00%		L0PCA7              	100.00%
Bootstrap support for E1Z5B1 as seed ortholog is 100%.
Bootstrap support for L0PCA7 as seed ortholog is 100%.

Group of orthologs #159. Best score 412 bits
Score difference with first non-orthologous sequence - C.variabilis:412 P.jiroveci:412

E1ZJ46              	100.00%		L0PCB2              	100.00%
Bootstrap support for E1ZJ46 as seed ortholog is 100%.
Bootstrap support for L0PCB2 as seed ortholog is 100%.

Group of orthologs #160. Best score 410 bits
Score difference with first non-orthologous sequence - C.variabilis:291 P.jiroveci:275

E1ZD66              	100.00%		L0PAA4              	100.00%
Bootstrap support for E1ZD66 as seed ortholog is 100%.
Bootstrap support for L0PAA4 as seed ortholog is 100%.

Group of orthologs #161. Best score 407 bits
Score difference with first non-orthologous sequence - C.variabilis:407 P.jiroveci:48

E1ZR15              	100.00%		L0P6T3              	100.00%
E1Z4T9              	8.74%		
Bootstrap support for E1ZR15 as seed ortholog is 100%.
Bootstrap support for L0P6T3 as seed ortholog is 90%.

Group of orthologs #162. Best score 407 bits
Score difference with first non-orthologous sequence - C.variabilis:307 P.jiroveci:328

E1ZQX3              	100.00%		L0PDG5              	100.00%
Bootstrap support for E1ZQX3 as seed ortholog is 100%.
Bootstrap support for L0PDG5 as seed ortholog is 100%.

Group of orthologs #163. Best score 407 bits
Score difference with first non-orthologous sequence - C.variabilis:407 P.jiroveci:407

E1ZRY1              	100.00%		L0PES6              	100.00%
Bootstrap support for E1ZRY1 as seed ortholog is 100%.
Bootstrap support for L0PES6 as seed ortholog is 100%.

Group of orthologs #164. Best score 405 bits
Score difference with first non-orthologous sequence - C.variabilis:405 P.jiroveci:405

E1ZPM4              	100.00%		L0PG27              	100.00%
Bootstrap support for E1ZPM4 as seed ortholog is 100%.
Bootstrap support for L0PG27 as seed ortholog is 100%.

Group of orthologs #165. Best score 405 bits
Score difference with first non-orthologous sequence - C.variabilis:405 P.jiroveci:405

E1ZSH7              	100.00%		L0PFQ5              	100.00%
Bootstrap support for E1ZSH7 as seed ortholog is 100%.
Bootstrap support for L0PFQ5 as seed ortholog is 100%.

Group of orthologs #166. Best score 403 bits
Score difference with first non-orthologous sequence - C.variabilis:403 P.jiroveci:403

E1ZFK6              	100.00%		L0PDI6              	100.00%
Bootstrap support for E1ZFK6 as seed ortholog is 100%.
Bootstrap support for L0PDI6 as seed ortholog is 100%.

Group of orthologs #167. Best score 403 bits
Score difference with first non-orthologous sequence - C.variabilis:223 P.jiroveci:403

E1ZQ23              	100.00%		L0PA09              	100.00%
Bootstrap support for E1ZQ23 as seed ortholog is 100%.
Bootstrap support for L0PA09 as seed ortholog is 100%.

Group of orthologs #168. Best score 402 bits
Score difference with first non-orthologous sequence - C.variabilis:119 P.jiroveci:402

E1ZIU9              	100.00%		L0PGN1              	100.00%
Bootstrap support for E1ZIU9 as seed ortholog is 98%.
Bootstrap support for L0PGN1 as seed ortholog is 100%.

Group of orthologs #169. Best score 401 bits
Score difference with first non-orthologous sequence - C.variabilis:146 P.jiroveci:401

E1ZQ41              	100.00%		L0P6U6              	100.00%
Bootstrap support for E1ZQ41 as seed ortholog is 99%.
Bootstrap support for L0P6U6 as seed ortholog is 100%.

Group of orthologs #170. Best score 399 bits
Score difference with first non-orthologous sequence - C.variabilis:399 P.jiroveci:399

E1ZFN1              	100.00%		L0PFM4              	100.00%
Bootstrap support for E1ZFN1 as seed ortholog is 100%.
Bootstrap support for L0PFM4 as seed ortholog is 100%.

Group of orthologs #171. Best score 399 bits
Score difference with first non-orthologous sequence - C.variabilis:399 P.jiroveci:399

E1ZQB5              	100.00%		L0PGB8              	100.00%
Bootstrap support for E1ZQB5 as seed ortholog is 100%.
Bootstrap support for L0PGB8 as seed ortholog is 100%.

Group of orthologs #172. Best score 398 bits
Score difference with first non-orthologous sequence - C.variabilis:398 P.jiroveci:398

E1ZJE0              	100.00%		L0P8P8              	100.00%
E1Z520              	26.81%		
Bootstrap support for E1ZJE0 as seed ortholog is 100%.
Bootstrap support for L0P8P8 as seed ortholog is 100%.

Group of orthologs #173. Best score 395 bits
Score difference with first non-orthologous sequence - C.variabilis:324 P.jiroveci:331

E1ZM06              	100.00%		L0PBU6              	100.00%
Bootstrap support for E1ZM06 as seed ortholog is 100%.
Bootstrap support for L0PBU6 as seed ortholog is 100%.

Group of orthologs #174. Best score 393 bits
Score difference with first non-orthologous sequence - C.variabilis:393 P.jiroveci:280

E1Z382              	100.00%		L0P7R1              	100.00%
Bootstrap support for E1Z382 as seed ortholog is 100%.
Bootstrap support for L0P7R1 as seed ortholog is 100%.

Group of orthologs #175. Best score 393 bits
Score difference with first non-orthologous sequence - C.variabilis:266 P.jiroveci:393

E1ZJF7              	100.00%		L0PCN1              	100.00%
Bootstrap support for E1ZJF7 as seed ortholog is 100%.
Bootstrap support for L0PCN1 as seed ortholog is 100%.

Group of orthologs #176. Best score 393 bits
Score difference with first non-orthologous sequence - C.variabilis:65 P.jiroveci:96

E1ZQW0              	100.00%		L0PAY3              	100.00%
Bootstrap support for E1ZQW0 as seed ortholog is 97%.
Bootstrap support for L0PAY3 as seed ortholog is 99%.

Group of orthologs #177. Best score 390 bits
Score difference with first non-orthologous sequence - C.variabilis:173 P.jiroveci:198

E1ZP80              	100.00%		L0PE41              	100.00%
Bootstrap support for E1ZP80 as seed ortholog is 99%.
Bootstrap support for L0PE41 as seed ortholog is 99%.

Group of orthologs #178. Best score 386 bits
Score difference with first non-orthologous sequence - C.variabilis:386 P.jiroveci:386

E1ZS72              	100.00%		L0PGA8              	100.00%
Bootstrap support for E1ZS72 as seed ortholog is 100%.
Bootstrap support for L0PGA8 as seed ortholog is 100%.

Group of orthologs #179. Best score 385 bits
Score difference with first non-orthologous sequence - C.variabilis:385 P.jiroveci:385

E1Z6M8              	100.00%		L0PE19              	100.00%
Bootstrap support for E1Z6M8 as seed ortholog is 100%.
Bootstrap support for L0PE19 as seed ortholog is 100%.

Group of orthologs #180. Best score 385 bits
Score difference with first non-orthologous sequence - C.variabilis:385 P.jiroveci:385

E1Z905              	100.00%		L0PDM0              	100.00%
Bootstrap support for E1Z905 as seed ortholog is 100%.
Bootstrap support for L0PDM0 as seed ortholog is 100%.

Group of orthologs #181. Best score 384 bits
Score difference with first non-orthologous sequence - C.variabilis:245 P.jiroveci:71

E1ZA98              	100.00%		L0PB68              	100.00%
Bootstrap support for E1ZA98 as seed ortholog is 100%.
Bootstrap support for L0PB68 as seed ortholog is 98%.

Group of orthologs #182. Best score 383 bits
Score difference with first non-orthologous sequence - C.variabilis:145 P.jiroveci:125

E1ZEH9              	100.00%		L0PGL4              	100.00%
                    	       		L0P7Q7              	40.58%
Bootstrap support for E1ZEH9 as seed ortholog is 99%.
Bootstrap support for L0PGL4 as seed ortholog is 99%.

Group of orthologs #183. Best score 382 bits
Score difference with first non-orthologous sequence - C.variabilis:382 P.jiroveci:382

E1Z812              	100.00%		L0P8Z3              	100.00%
Bootstrap support for E1Z812 as seed ortholog is 100%.
Bootstrap support for L0P8Z3 as seed ortholog is 100%.

Group of orthologs #184. Best score 382 bits
Score difference with first non-orthologous sequence - C.variabilis:382 P.jiroveci:382

E1ZG73              	100.00%		L0PF23              	100.00%
Bootstrap support for E1ZG73 as seed ortholog is 100%.
Bootstrap support for L0PF23 as seed ortholog is 100%.

Group of orthologs #185. Best score 382 bits
Score difference with first non-orthologous sequence - C.variabilis:382 P.jiroveci:382

E1ZMG7              	100.00%		L0PH85              	100.00%
Bootstrap support for E1ZMG7 as seed ortholog is 100%.
Bootstrap support for L0PH85 as seed ortholog is 100%.

Group of orthologs #186. Best score 381 bits
Score difference with first non-orthologous sequence - C.variabilis:250 P.jiroveci:293

E1Z8D0              	100.00%		L0PAL3              	100.00%
Bootstrap support for E1Z8D0 as seed ortholog is 100%.
Bootstrap support for L0PAL3 as seed ortholog is 100%.

Group of orthologs #187. Best score 378 bits
Score difference with first non-orthologous sequence - C.variabilis:378 P.jiroveci:378

E1ZD31              	100.00%		L0PFY1              	100.00%
Bootstrap support for E1ZD31 as seed ortholog is 100%.
Bootstrap support for L0PFY1 as seed ortholog is 100%.

Group of orthologs #188. Best score 376 bits
Score difference with first non-orthologous sequence - C.variabilis:277 P.jiroveci:376

E1ZCL1              	100.00%		L0PI36              	100.00%
Bootstrap support for E1ZCL1 as seed ortholog is 100%.
Bootstrap support for L0PI36 as seed ortholog is 100%.

Group of orthologs #189. Best score 369 bits
Score difference with first non-orthologous sequence - C.variabilis:369 P.jiroveci:369

E1Z712              	100.00%		L0PGF5              	100.00%
Bootstrap support for E1Z712 as seed ortholog is 100%.
Bootstrap support for L0PGF5 as seed ortholog is 100%.

Group of orthologs #190. Best score 368 bits
Score difference with first non-orthologous sequence - C.variabilis:368 P.jiroveci:368

E1ZT76              	100.00%		L0P7L7              	100.00%
Bootstrap support for E1ZT76 as seed ortholog is 100%.
Bootstrap support for L0P7L7 as seed ortholog is 100%.

Group of orthologs #191. Best score 365 bits
Score difference with first non-orthologous sequence - C.variabilis:365 P.jiroveci:274

E1ZQM6              	100.00%		L0PAN7              	100.00%
Bootstrap support for E1ZQM6 as seed ortholog is 100%.
Bootstrap support for L0PAN7 as seed ortholog is 100%.

Group of orthologs #192. Best score 364 bits
Score difference with first non-orthologous sequence - C.variabilis:364 P.jiroveci:364

E1Z361              	100.00%		L0PBA9              	100.00%
E1ZFI5              	16.44%		
Bootstrap support for E1Z361 as seed ortholog is 100%.
Bootstrap support for L0PBA9 as seed ortholog is 100%.

Group of orthologs #193. Best score 364 bits
Score difference with first non-orthologous sequence - C.variabilis:364 P.jiroveci:292

E1ZQ34              	100.00%		L0P8G2              	100.00%
Bootstrap support for E1ZQ34 as seed ortholog is 100%.
Bootstrap support for L0P8G2 as seed ortholog is 100%.

Group of orthologs #194. Best score 363 bits
Score difference with first non-orthologous sequence - C.variabilis:190 P.jiroveci:363

E1Z5V6              	100.00%		L0P7Z6              	100.00%
Bootstrap support for E1Z5V6 as seed ortholog is 99%.
Bootstrap support for L0P7Z6 as seed ortholog is 100%.

Group of orthologs #195. Best score 362 bits
Score difference with first non-orthologous sequence - C.variabilis:42 P.jiroveci:362

E1Z2W1              	100.00%		L0PGH3              	100.00%
E1ZIJ9              	16.67%		
Bootstrap support for E1Z2W1 as seed ortholog is 85%.
Bootstrap support for L0PGH3 as seed ortholog is 100%.

Group of orthologs #196. Best score 362 bits
Score difference with first non-orthologous sequence - C.variabilis:362 P.jiroveci:362

E1ZRC2              	100.00%		L0PAH9              	100.00%
                    	       		L0PAZ7              	33.29%
Bootstrap support for E1ZRC2 as seed ortholog is 100%.
Bootstrap support for L0PAH9 as seed ortholog is 100%.

Group of orthologs #197. Best score 362 bits
Score difference with first non-orthologous sequence - C.variabilis:110 P.jiroveci:103

E1ZP05              	100.00%		L0PCE9              	100.00%
Bootstrap support for E1ZP05 as seed ortholog is 99%.
Bootstrap support for L0PCE9 as seed ortholog is 95%.

Group of orthologs #198. Best score 361 bits
Score difference with first non-orthologous sequence - C.variabilis:361 P.jiroveci:361

E1ZE45              	100.00%		L0PCR5              	100.00%
                    	       		L0P9C2              	57.44%
Bootstrap support for E1ZE45 as seed ortholog is 100%.
Bootstrap support for L0PCR5 as seed ortholog is 100%.

Group of orthologs #199. Best score 360 bits
Score difference with first non-orthologous sequence - C.variabilis:162 P.jiroveci:194

E1ZIY2              	100.00%		L0PB67              	100.00%
Bootstrap support for E1ZIY2 as seed ortholog is 99%.
Bootstrap support for L0PB67 as seed ortholog is 99%.

Group of orthologs #200. Best score 359 bits
Score difference with first non-orthologous sequence - C.variabilis:359 P.jiroveci:359

E1Z749              	100.00%		L0PB12              	100.00%
Bootstrap support for E1Z749 as seed ortholog is 100%.
Bootstrap support for L0PB12 as seed ortholog is 100%.

Group of orthologs #201. Best score 359 bits
Score difference with first non-orthologous sequence - C.variabilis:359 P.jiroveci:359

E1ZD78              	100.00%		L0PID0              	100.00%
Bootstrap support for E1ZD78 as seed ortholog is 100%.
Bootstrap support for L0PID0 as seed ortholog is 100%.

Group of orthologs #202. Best score 358 bits
Score difference with first non-orthologous sequence - C.variabilis:358 P.jiroveci:358

E1ZLR0              	100.00%		L0P8F1              	100.00%
Bootstrap support for E1ZLR0 as seed ortholog is 100%.
Bootstrap support for L0P8F1 as seed ortholog is 100%.

Group of orthologs #203. Best score 357 bits
Score difference with first non-orthologous sequence - C.variabilis:160 P.jiroveci:357

E1ZJ58              	100.00%		L0PDT0              	100.00%
Bootstrap support for E1ZJ58 as seed ortholog is 100%.
Bootstrap support for L0PDT0 as seed ortholog is 100%.

Group of orthologs #204. Best score 357 bits
Score difference with first non-orthologous sequence - C.variabilis:357 P.jiroveci:357

E1ZJT4              	100.00%		L0PGU0              	100.00%
Bootstrap support for E1ZJT4 as seed ortholog is 100%.
Bootstrap support for L0PGU0 as seed ortholog is 100%.

Group of orthologs #205. Best score 356 bits
Score difference with first non-orthologous sequence - C.variabilis:76 P.jiroveci:356

E1Z4P6              	100.00%		L0PCP3              	100.00%
Bootstrap support for E1Z4P6 as seed ortholog is 94%.
Bootstrap support for L0PCP3 as seed ortholog is 100%.

Group of orthologs #206. Best score 355 bits
Score difference with first non-orthologous sequence - C.variabilis:355 P.jiroveci:355

E1ZQD6              	100.00%		L0PG19              	100.00%
Bootstrap support for E1ZQD6 as seed ortholog is 100%.
Bootstrap support for L0PG19 as seed ortholog is 100%.

Group of orthologs #207. Best score 354 bits
Score difference with first non-orthologous sequence - C.variabilis:354 P.jiroveci:354

E1ZIC1              	100.00%		L0PBE9              	100.00%
Bootstrap support for E1ZIC1 as seed ortholog is 100%.
Bootstrap support for L0PBE9 as seed ortholog is 100%.

Group of orthologs #208. Best score 353 bits
Score difference with first non-orthologous sequence - C.variabilis:254 P.jiroveci:353

E1ZQ61              	100.00%		L0PFP6              	100.00%
Bootstrap support for E1ZQ61 as seed ortholog is 100%.
Bootstrap support for L0PFP6 as seed ortholog is 100%.

Group of orthologs #209. Best score 351 bits
Score difference with first non-orthologous sequence - C.variabilis:351 P.jiroveci:351

E1Z8C8              	100.00%		L0P921              	100.00%
Bootstrap support for E1Z8C8 as seed ortholog is 100%.
Bootstrap support for L0P921 as seed ortholog is 100%.

Group of orthologs #210. Best score 351 bits
Score difference with first non-orthologous sequence - C.variabilis:74 P.jiroveci:117

E1ZL30              	100.00%		L0PA26              	100.00%
Bootstrap support for E1ZL30 as seed ortholog is 98%.
Bootstrap support for L0PA26 as seed ortholog is 99%.

Group of orthologs #211. Best score 349 bits
Score difference with first non-orthologous sequence - C.variabilis:239 P.jiroveci:228

E1Z741              	100.00%		L0PA57              	100.00%
Bootstrap support for E1Z741 as seed ortholog is 100%.
Bootstrap support for L0PA57 as seed ortholog is 100%.

Group of orthologs #212. Best score 349 bits
Score difference with first non-orthologous sequence - C.variabilis:37 P.jiroveci:136

E1ZNT0              	100.00%		L0PCJ5              	100.00%
Bootstrap support for E1ZNT0 as seed ortholog is 87%.
Bootstrap support for L0PCJ5 as seed ortholog is 99%.

Group of orthologs #213. Best score 349 bits
Score difference with first non-orthologous sequence - C.variabilis:250 P.jiroveci:262

E1ZL40              	100.00%		L0PFE0              	100.00%
Bootstrap support for E1ZL40 as seed ortholog is 100%.
Bootstrap support for L0PFE0 as seed ortholog is 100%.

Group of orthologs #214. Best score 347 bits
Score difference with first non-orthologous sequence - C.variabilis:273 P.jiroveci:347

E1ZBK2              	100.00%		L0PBA5              	100.00%
Bootstrap support for E1ZBK2 as seed ortholog is 100%.
Bootstrap support for L0PBA5 as seed ortholog is 100%.

Group of orthologs #215. Best score 347 bits
Score difference with first non-orthologous sequence - C.variabilis:347 P.jiroveci:347

E1ZN52              	100.00%		L0P9X7              	100.00%
Bootstrap support for E1ZN52 as seed ortholog is 100%.
Bootstrap support for L0P9X7 as seed ortholog is 100%.

Group of orthologs #216. Best score 346 bits
Score difference with first non-orthologous sequence - C.variabilis:36 P.jiroveci:167

E1ZDH8              	100.00%		L0P9Z0              	100.00%
E1ZTF5              	9.50%		
Bootstrap support for E1ZDH8 as seed ortholog is 82%.
Bootstrap support for L0P9Z0 as seed ortholog is 100%.

Group of orthologs #217. Best score 346 bits
Score difference with first non-orthologous sequence - C.variabilis:182 P.jiroveci:346

E1Z2W2              	100.00%		L0PEY9              	100.00%
Bootstrap support for E1Z2W2 as seed ortholog is 99%.
Bootstrap support for L0PEY9 as seed ortholog is 100%.

Group of orthologs #218. Best score 345 bits
Score difference with first non-orthologous sequence - C.variabilis:345 P.jiroveci:262

E1Z770              	100.00%		L0PBY2              	100.00%
Bootstrap support for E1Z770 as seed ortholog is 100%.
Bootstrap support for L0PBY2 as seed ortholog is 100%.

Group of orthologs #219. Best score 345 bits
Score difference with first non-orthologous sequence - C.variabilis:274 P.jiroveci:345

E1ZQ39              	100.00%		L0PIR9              	100.00%
Bootstrap support for E1ZQ39 as seed ortholog is 100%.
Bootstrap support for L0PIR9 as seed ortholog is 100%.

Group of orthologs #220. Best score 344 bits
Score difference with first non-orthologous sequence - C.variabilis:344 P.jiroveci:344

E1Z5S3              	100.00%		L0PF30              	100.00%
E1ZHC1              	5.83%		
Bootstrap support for E1Z5S3 as seed ortholog is 100%.
Bootstrap support for L0PF30 as seed ortholog is 100%.

Group of orthologs #221. Best score 342 bits
Score difference with first non-orthologous sequence - C.variabilis:342 P.jiroveci:342

E1ZPL7              	100.00%		L0PBA8              	100.00%
E1ZLZ2              	6.45%		
Bootstrap support for E1ZPL7 as seed ortholog is 100%.
Bootstrap support for L0PBA8 as seed ortholog is 100%.

Group of orthologs #222. Best score 341 bits
Score difference with first non-orthologous sequence - C.variabilis:341 P.jiroveci:341

E1Z5T2              	100.00%		L0PE57              	100.00%
Bootstrap support for E1Z5T2 as seed ortholog is 100%.
Bootstrap support for L0PE57 as seed ortholog is 100%.

Group of orthologs #223. Best score 340 bits
Score difference with first non-orthologous sequence - C.variabilis:340 P.jiroveci:340

E1ZLJ7              	100.00%		L0P702              	100.00%
E1ZLJ8              	74.61%		
Bootstrap support for E1ZLJ7 as seed ortholog is 100%.
Bootstrap support for L0P702 as seed ortholog is 100%.

Group of orthologs #224. Best score 340 bits
Score difference with first non-orthologous sequence - C.variabilis:340 P.jiroveci:340

E1ZCW7              	100.00%		L0PB85              	100.00%
Bootstrap support for E1ZCW7 as seed ortholog is 100%.
Bootstrap support for L0PB85 as seed ortholog is 100%.

Group of orthologs #225. Best score 339 bits
Score difference with first non-orthologous sequence - C.variabilis:339 P.jiroveci:339

E1Z4D8              	100.00%		L0PDT2              	100.00%
Bootstrap support for E1Z4D8 as seed ortholog is 100%.
Bootstrap support for L0PDT2 as seed ortholog is 100%.

Group of orthologs #226. Best score 339 bits
Score difference with first non-orthologous sequence - C.variabilis:7 P.jiroveci:339

E1Z5R4              	100.00%		L0PI13              	100.00%
Bootstrap support for E1Z5R4 as seed ortholog is 56%.
Alternative seed ortholog is E1ZAW3 (7 bits away from this cluster)
Bootstrap support for L0PI13 as seed ortholog is 100%.

Group of orthologs #227. Best score 339 bits
Score difference with first non-orthologous sequence - C.variabilis:63 P.jiroveci:339

E1ZH99              	100.00%		L0P8Y6              	100.00%
Bootstrap support for E1ZH99 as seed ortholog is 89%.
Bootstrap support for L0P8Y6 as seed ortholog is 100%.

Group of orthologs #228. Best score 338 bits
Score difference with first non-orthologous sequence - C.variabilis:246 P.jiroveci:338

E1ZJJ7              	100.00%		L0PAI0              	100.00%
Bootstrap support for E1ZJJ7 as seed ortholog is 100%.
Bootstrap support for L0PAI0 as seed ortholog is 100%.

Group of orthologs #229. Best score 336 bits
Score difference with first non-orthologous sequence - C.variabilis:336 P.jiroveci:336

E1ZAF2              	100.00%		L0PDS0              	100.00%
Bootstrap support for E1ZAF2 as seed ortholog is 100%.
Bootstrap support for L0PDS0 as seed ortholog is 100%.

Group of orthologs #230. Best score 336 bits
Score difference with first non-orthologous sequence - C.variabilis:336 P.jiroveci:336

E1ZCK6              	100.00%		L0PFD9              	100.00%
Bootstrap support for E1ZCK6 as seed ortholog is 100%.
Bootstrap support for L0PFD9 as seed ortholog is 100%.

Group of orthologs #231. Best score 336 bits
Score difference with first non-orthologous sequence - C.variabilis:336 P.jiroveci:336

E1ZJR3              	100.00%		L0P9S1              	100.00%
Bootstrap support for E1ZJR3 as seed ortholog is 100%.
Bootstrap support for L0P9S1 as seed ortholog is 100%.

Group of orthologs #232. Best score 334 bits
Score difference with first non-orthologous sequence - C.variabilis:258 P.jiroveci:334

E1Z4G4              	100.00%		L0PBN1              	100.00%
Bootstrap support for E1Z4G4 as seed ortholog is 99%.
Bootstrap support for L0PBN1 as seed ortholog is 100%.

Group of orthologs #233. Best score 334 bits
Score difference with first non-orthologous sequence - C.variabilis:209 P.jiroveci:334

E1Z4S4              	100.00%		L0PEZ0              	100.00%
Bootstrap support for E1Z4S4 as seed ortholog is 100%.
Bootstrap support for L0PEZ0 as seed ortholog is 100%.

Group of orthologs #234. Best score 334 bits
Score difference with first non-orthologous sequence - C.variabilis:334 P.jiroveci:334

E1Z8L2              	100.00%		L0PFQ8              	100.00%
Bootstrap support for E1Z8L2 as seed ortholog is 100%.
Bootstrap support for L0PFQ8 as seed ortholog is 100%.

Group of orthologs #235. Best score 333 bits
Score difference with first non-orthologous sequence - C.variabilis:333 P.jiroveci:333

E1ZRW2              	100.00%		L0PHL5              	100.00%
Bootstrap support for E1ZRW2 as seed ortholog is 100%.
Bootstrap support for L0PHL5 as seed ortholog is 100%.

Group of orthologs #236. Best score 329 bits
Score difference with first non-orthologous sequence - C.variabilis:329 P.jiroveci:257

E1Z8H9              	100.00%		L0P7R5              	100.00%
Bootstrap support for E1Z8H9 as seed ortholog is 100%.
Bootstrap support for L0P7R5 as seed ortholog is 100%.

Group of orthologs #237. Best score 329 bits
Score difference with first non-orthologous sequence - C.variabilis:232 P.jiroveci:329

E1ZH71              	100.00%		L0P7P4              	100.00%
Bootstrap support for E1ZH71 as seed ortholog is 100%.
Bootstrap support for L0P7P4 as seed ortholog is 100%.

Group of orthologs #238. Best score 328 bits
Score difference with first non-orthologous sequence - C.variabilis:328 P.jiroveci:328

E1ZAA4              	100.00%		L0PAU1              	100.00%
Bootstrap support for E1ZAA4 as seed ortholog is 100%.
Bootstrap support for L0PAU1 as seed ortholog is 100%.

Group of orthologs #239. Best score 327 bits
Score difference with first non-orthologous sequence - C.variabilis:266 P.jiroveci:133

E1Z2C9              	100.00%		L0PD82              	100.00%
Bootstrap support for E1Z2C9 as seed ortholog is 100%.
Bootstrap support for L0PD82 as seed ortholog is 99%.

Group of orthologs #240. Best score 324 bits
Score difference with first non-orthologous sequence - C.variabilis:324 P.jiroveci:324

E1ZCI9              	100.00%		L0PA65              	100.00%
Bootstrap support for E1ZCI9 as seed ortholog is 100%.
Bootstrap support for L0PA65 as seed ortholog is 100%.

Group of orthologs #241. Best score 324 bits
Score difference with first non-orthologous sequence - C.variabilis:324 P.jiroveci:324

E1ZGC2              	100.00%		L0P8G8              	100.00%
Bootstrap support for E1ZGC2 as seed ortholog is 100%.
Bootstrap support for L0P8G8 as seed ortholog is 100%.

Group of orthologs #242. Best score 321 bits
Score difference with first non-orthologous sequence - C.variabilis:321 P.jiroveci:321

E1Z9W2              	100.00%		L0P8T4              	100.00%
Bootstrap support for E1Z9W2 as seed ortholog is 100%.
Bootstrap support for L0P8T4 as seed ortholog is 100%.

Group of orthologs #243. Best score 321 bits
Score difference with first non-orthologous sequence - C.variabilis:321 P.jiroveci:321

E1ZKX5              	100.00%		L0PD17              	100.00%
Bootstrap support for E1ZKX5 as seed ortholog is 100%.
Bootstrap support for L0PD17 as seed ortholog is 100%.

Group of orthologs #244. Best score 321 bits
Score difference with first non-orthologous sequence - C.variabilis:321 P.jiroveci:321

E1ZSX4              	100.00%		L0PFJ5              	100.00%
Bootstrap support for E1ZSX4 as seed ortholog is 100%.
Bootstrap support for L0PFJ5 as seed ortholog is 100%.

Group of orthologs #245. Best score 320 bits
Score difference with first non-orthologous sequence - C.variabilis:134 P.jiroveci:29

E1ZIK5              	100.00%		L0PBP2              	100.00%
Bootstrap support for E1ZIK5 as seed ortholog is 99%.
Bootstrap support for L0PBP2 as seed ortholog is 66%.
Alternative seed ortholog is L0P7S4 (29 bits away from this cluster)

Group of orthologs #246. Best score 320 bits
Score difference with first non-orthologous sequence - C.variabilis:320 P.jiroveci:320

E1ZGT8              	100.00%		L0PFI2              	100.00%
Bootstrap support for E1ZGT8 as seed ortholog is 100%.
Bootstrap support for L0PFI2 as seed ortholog is 100%.

Group of orthologs #247. Best score 320 bits
Score difference with first non-orthologous sequence - C.variabilis:132 P.jiroveci:95

E1ZQW6              	100.00%		L0PBP3              	100.00%
Bootstrap support for E1ZQW6 as seed ortholog is 99%.
Bootstrap support for L0PBP3 as seed ortholog is 98%.

Group of orthologs #248. Best score 319 bits
Score difference with first non-orthologous sequence - C.variabilis:319 P.jiroveci:319

E1ZF75              	100.00%		L0PA15              	100.00%
Bootstrap support for E1ZF75 as seed ortholog is 100%.
Bootstrap support for L0PA15 as seed ortholog is 100%.

Group of orthologs #249. Best score 318 bits
Score difference with first non-orthologous sequence - C.variabilis:318 P.jiroveci:318

E1ZH03              	100.00%		L0P7M4              	100.00%
                    	       		L0PH62              	63.77%
Bootstrap support for E1ZH03 as seed ortholog is 100%.
Bootstrap support for L0P7M4 as seed ortholog is 100%.

Group of orthologs #250. Best score 317 bits
Score difference with first non-orthologous sequence - C.variabilis:164 P.jiroveci:317

E1ZTI9              	100.00%		L0PDH8              	100.00%
Bootstrap support for E1ZTI9 as seed ortholog is 100%.
Bootstrap support for L0PDH8 as seed ortholog is 100%.

Group of orthologs #251. Best score 316 bits
Score difference with first non-orthologous sequence - C.variabilis:316 P.jiroveci:316

E1ZT19              	100.00%		L0PA42              	100.00%
Bootstrap support for E1ZT19 as seed ortholog is 100%.
Bootstrap support for L0PA42 as seed ortholog is 100%.

Group of orthologs #252. Best score 315 bits
Score difference with first non-orthologous sequence - C.variabilis:64 P.jiroveci:315

E1Z3A2              	100.00%		L0P9Y8              	100.00%
Bootstrap support for E1Z3A2 as seed ortholog is 99%.
Bootstrap support for L0P9Y8 as seed ortholog is 100%.

Group of orthologs #253. Best score 314 bits
Score difference with first non-orthologous sequence - C.variabilis:314 P.jiroveci:314

E1Z9J1              	100.00%		L0PCL4              	100.00%
E1Z860              	11.09%		
Bootstrap support for E1Z9J1 as seed ortholog is 100%.
Bootstrap support for L0PCL4 as seed ortholog is 100%.

Group of orthologs #254. Best score 314 bits
Score difference with first non-orthologous sequence - C.variabilis:314 P.jiroveci:314

E1ZPG3              	100.00%		L0PAQ3              	100.00%
Bootstrap support for E1ZPG3 as seed ortholog is 100%.
Bootstrap support for L0PAQ3 as seed ortholog is 100%.

Group of orthologs #255. Best score 313 bits
Score difference with first non-orthologous sequence - C.variabilis:21 P.jiroveci:104

E1ZE21              	100.00%		L0PFG7              	100.00%
Bootstrap support for E1ZE21 as seed ortholog is 68%.
Alternative seed ortholog is E1ZP53 (21 bits away from this cluster)
Bootstrap support for L0PFG7 as seed ortholog is 98%.

Group of orthologs #256. Best score 313 bits
Score difference with first non-orthologous sequence - C.variabilis:313 P.jiroveci:313

E1ZMW3              	100.00%		L0PBC5              	100.00%
Bootstrap support for E1ZMW3 as seed ortholog is 100%.
Bootstrap support for L0PBC5 as seed ortholog is 100%.

Group of orthologs #257. Best score 313 bits
Score difference with first non-orthologous sequence - C.variabilis:259 P.jiroveci:313

E1ZPS4              	100.00%		L0PDF2              	100.00%
Bootstrap support for E1ZPS4 as seed ortholog is 100%.
Bootstrap support for L0PDF2 as seed ortholog is 100%.

Group of orthologs #258. Best score 312 bits
Score difference with first non-orthologous sequence - C.variabilis:147 P.jiroveci:157

E1ZFF9              	100.00%		L0PC98              	100.00%
Bootstrap support for E1ZFF9 as seed ortholog is 99%.
Bootstrap support for L0PC98 as seed ortholog is 99%.

Group of orthologs #259. Best score 311 bits
Score difference with first non-orthologous sequence - C.variabilis:311 P.jiroveci:311

E1Z3P2              	100.00%		L0PC82              	100.00%
Bootstrap support for E1Z3P2 as seed ortholog is 100%.
Bootstrap support for L0PC82 as seed ortholog is 100%.

Group of orthologs #260. Best score 311 bits
Score difference with first non-orthologous sequence - C.variabilis:311 P.jiroveci:311

E1Z8Z4              	100.00%		L0PHJ7              	100.00%
Bootstrap support for E1Z8Z4 as seed ortholog is 100%.
Bootstrap support for L0PHJ7 as seed ortholog is 100%.

Group of orthologs #261. Best score 311 bits
Score difference with first non-orthologous sequence - C.variabilis:311 P.jiroveci:311

E1ZP40              	100.00%		L0P8R5              	100.00%
Bootstrap support for E1ZP40 as seed ortholog is 100%.
Bootstrap support for L0P8R5 as seed ortholog is 100%.

Group of orthologs #262. Best score 310 bits
Score difference with first non-orthologous sequence - C.variabilis:310 P.jiroveci:310

E1Z857              	100.00%		L0PCG4              	100.00%
Bootstrap support for E1Z857 as seed ortholog is 100%.
Bootstrap support for L0PCG4 as seed ortholog is 100%.

Group of orthologs #263. Best score 310 bits
Score difference with first non-orthologous sequence - C.variabilis:310 P.jiroveci:41

E1Z613              	100.00%		L0PFY3              	100.00%
Bootstrap support for E1Z613 as seed ortholog is 100%.
Bootstrap support for L0PFY3 as seed ortholog is 88%.

Group of orthologs #264. Best score 310 bits
Score difference with first non-orthologous sequence - C.variabilis:310 P.jiroveci:310

E1ZCX4              	100.00%		L0PAU5              	100.00%
Bootstrap support for E1ZCX4 as seed ortholog is 100%.
Bootstrap support for L0PAU5 as seed ortholog is 100%.

Group of orthologs #265. Best score 310 bits
Score difference with first non-orthologous sequence - C.variabilis:15 P.jiroveci:310

E1ZLB6              	100.00%		L0PEX5              	100.00%
Bootstrap support for E1ZLB6 as seed ortholog is 66%.
Alternative seed ortholog is E1ZQQ3 (15 bits away from this cluster)
Bootstrap support for L0PEX5 as seed ortholog is 100%.

Group of orthologs #266. Best score 309 bits
Score difference with first non-orthologous sequence - C.variabilis:309 P.jiroveci:176

E1ZJV7              	100.00%		L0PH03              	100.00%
E1ZSK0              	34.51%		
Bootstrap support for E1ZJV7 as seed ortholog is 100%.
Bootstrap support for L0PH03 as seed ortholog is 100%.

Group of orthologs #267. Best score 309 bits
Score difference with first non-orthologous sequence - C.variabilis:309 P.jiroveci:309

E1ZA21              	100.00%		L0PF83              	100.00%
Bootstrap support for E1ZA21 as seed ortholog is 100%.
Bootstrap support for L0PF83 as seed ortholog is 100%.

Group of orthologs #268. Best score 309 bits
Score difference with first non-orthologous sequence - C.variabilis:309 P.jiroveci:309

E1ZQW2              	100.00%		L0P9X4              	100.00%
Bootstrap support for E1ZQW2 as seed ortholog is 100%.
Bootstrap support for L0P9X4 as seed ortholog is 100%.

Group of orthologs #269. Best score 308 bits
Score difference with first non-orthologous sequence - C.variabilis:308 P.jiroveci:308

E1Z2N1              	100.00%		L0PFC9              	100.00%
Bootstrap support for E1Z2N1 as seed ortholog is 100%.
Bootstrap support for L0PFC9 as seed ortholog is 100%.

Group of orthologs #270. Best score 307 bits
Score difference with first non-orthologous sequence - C.variabilis:307 P.jiroveci:307

E1Z4D7              	100.00%		L0PD18              	100.00%
Bootstrap support for E1Z4D7 as seed ortholog is 100%.
Bootstrap support for L0PD18 as seed ortholog is 100%.

Group of orthologs #271. Best score 307 bits
Score difference with first non-orthologous sequence - C.variabilis:307 P.jiroveci:307

E1ZH54              	100.00%		L0PAL6              	100.00%
Bootstrap support for E1ZH54 as seed ortholog is 100%.
Bootstrap support for L0PAL6 as seed ortholog is 100%.

Group of orthologs #272. Best score 307 bits
Score difference with first non-orthologous sequence - C.variabilis:307 P.jiroveci:307

E1ZKU7              	100.00%		L0PAS8              	100.00%
Bootstrap support for E1ZKU7 as seed ortholog is 100%.
Bootstrap support for L0PAS8 as seed ortholog is 100%.

Group of orthologs #273. Best score 307 bits
Score difference with first non-orthologous sequence - C.variabilis:307 P.jiroveci:307

E1ZJ73              	100.00%		L0PGL6              	100.00%
Bootstrap support for E1ZJ73 as seed ortholog is 100%.
Bootstrap support for L0PGL6 as seed ortholog is 100%.

Group of orthologs #274. Best score 306 bits
Score difference with first non-orthologous sequence - C.variabilis:241 P.jiroveci:248

E1ZJ35              	100.00%		L0PEF5              	100.00%
Bootstrap support for E1ZJ35 as seed ortholog is 100%.
Bootstrap support for L0PEF5 as seed ortholog is 100%.

Group of orthologs #275. Best score 305 bits
Score difference with first non-orthologous sequence - C.variabilis:140 P.jiroveci:305

E1Z629              	100.00%		L0PC17              	100.00%
                    	       		L0PD22              	53.81%
Bootstrap support for E1Z629 as seed ortholog is 100%.
Bootstrap support for L0PC17 as seed ortholog is 100%.

Group of orthologs #276. Best score 305 bits
Score difference with first non-orthologous sequence - C.variabilis:117 P.jiroveci:100

E1Z627              	100.00%		L0PAY5              	100.00%
Bootstrap support for E1Z627 as seed ortholog is 99%.
Bootstrap support for L0PAY5 as seed ortholog is 99%.

Group of orthologs #277. Best score 304 bits
Score difference with first non-orthologous sequence - C.variabilis:218 P.jiroveci:304

E1Z3F1              	100.00%		L0P6Z0              	100.00%
Bootstrap support for E1Z3F1 as seed ortholog is 100%.
Bootstrap support for L0P6Z0 as seed ortholog is 100%.

Group of orthologs #278. Best score 304 bits
Score difference with first non-orthologous sequence - C.variabilis:304 P.jiroveci:304

E1Z4J0              	100.00%		L0PD03              	100.00%
Bootstrap support for E1Z4J0 as seed ortholog is 100%.
Bootstrap support for L0PD03 as seed ortholog is 100%.

Group of orthologs #279. Best score 304 bits
Score difference with first non-orthologous sequence - C.variabilis:304 P.jiroveci:304

E1Z6J7              	100.00%		L0PBQ9              	100.00%
Bootstrap support for E1Z6J7 as seed ortholog is 100%.
Bootstrap support for L0PBQ9 as seed ortholog is 100%.

Group of orthologs #280. Best score 304 bits
Score difference with first non-orthologous sequence - C.variabilis:113 P.jiroveci:304

E1ZIK6              	100.00%		L0P8R6              	100.00%
Bootstrap support for E1ZIK6 as seed ortholog is 99%.
Bootstrap support for L0P8R6 as seed ortholog is 100%.

Group of orthologs #281. Best score 304 bits
Score difference with first non-orthologous sequence - C.variabilis:183 P.jiroveci:237

E1ZFJ7              	100.00%		L0PEI4              	100.00%
Bootstrap support for E1ZFJ7 as seed ortholog is 99%.
Bootstrap support for L0PEI4 as seed ortholog is 100%.

Group of orthologs #282. Best score 302 bits
Score difference with first non-orthologous sequence - C.variabilis:302 P.jiroveci:302

E1Z9W4              	100.00%		L0P861              	100.00%
Bootstrap support for E1Z9W4 as seed ortholog is 100%.
Bootstrap support for L0P861 as seed ortholog is 100%.

Group of orthologs #283. Best score 301 bits
Score difference with first non-orthologous sequence - C.variabilis:301 P.jiroveci:136

E1ZAJ1              	100.00%		L0PC30              	100.00%
Bootstrap support for E1ZAJ1 as seed ortholog is 100%.
Bootstrap support for L0PC30 as seed ortholog is 99%.

Group of orthologs #284. Best score 301 bits
Score difference with first non-orthologous sequence - C.variabilis:301 P.jiroveci:301

E1ZIF7              	100.00%		L0PEE4              	100.00%
Bootstrap support for E1ZIF7 as seed ortholog is 100%.
Bootstrap support for L0PEE4 as seed ortholog is 100%.

Group of orthologs #285. Best score 300 bits
Score difference with first non-orthologous sequence - C.variabilis:300 P.jiroveci:300

E1Z2D3              	100.00%		L0PBV8              	100.00%
Bootstrap support for E1Z2D3 as seed ortholog is 100%.
Bootstrap support for L0PBV8 as seed ortholog is 100%.

Group of orthologs #286. Best score 300 bits
Score difference with first non-orthologous sequence - C.variabilis:68 P.jiroveci:223

E1Z4F1              	100.00%		L0PG24              	100.00%
Bootstrap support for E1Z4F1 as seed ortholog is 94%.
Bootstrap support for L0PG24 as seed ortholog is 100%.

Group of orthologs #287. Best score 298 bits
Score difference with first non-orthologous sequence - C.variabilis:136 P.jiroveci:298

E1Z8Z9              	100.00%		L0P8A6              	100.00%
Bootstrap support for E1Z8Z9 as seed ortholog is 99%.
Bootstrap support for L0P8A6 as seed ortholog is 100%.

Group of orthologs #288. Best score 297 bits
Score difference with first non-orthologous sequence - C.variabilis:297 P.jiroveci:297

E1ZQY4              	100.00%		L0PFI8              	100.00%
Bootstrap support for E1ZQY4 as seed ortholog is 100%.
Bootstrap support for L0PFI8 as seed ortholog is 100%.

Group of orthologs #289. Best score 295 bits
Score difference with first non-orthologous sequence - C.variabilis:295 P.jiroveci:295

E1ZPY7              	100.00%		L0PG22              	100.00%
                    	       		L0PB04              	70.89%
Bootstrap support for E1ZPY7 as seed ortholog is 100%.
Bootstrap support for L0PG22 as seed ortholog is 100%.

Group of orthologs #290. Best score 295 bits
Score difference with first non-orthologous sequence - C.variabilis:295 P.jiroveci:295

E1Z8W6              	100.00%		L0PB98              	100.00%
Bootstrap support for E1Z8W6 as seed ortholog is 100%.
Bootstrap support for L0PB98 as seed ortholog is 100%.

Group of orthologs #291. Best score 294 bits
Score difference with first non-orthologous sequence - C.variabilis:294 P.jiroveci:294

E1Z4U0              	100.00%		L0P9N8              	100.00%
Bootstrap support for E1Z4U0 as seed ortholog is 100%.
Bootstrap support for L0P9N8 as seed ortholog is 100%.

Group of orthologs #292. Best score 294 bits
Score difference with first non-orthologous sequence - C.variabilis:93 P.jiroveci:86

E1Z452              	100.00%		L0PGJ9              	100.00%
Bootstrap support for E1Z452 as seed ortholog is 99%.
Bootstrap support for L0PGJ9 as seed ortholog is 97%.

Group of orthologs #293. Best score 294 bits
Score difference with first non-orthologous sequence - C.variabilis:294 P.jiroveci:294

E1ZFF3              	100.00%		L0PDW0              	100.00%
Bootstrap support for E1ZFF3 as seed ortholog is 100%.
Bootstrap support for L0PDW0 as seed ortholog is 100%.

Group of orthologs #294. Best score 293 bits
Score difference with first non-orthologous sequence - C.variabilis:293 P.jiroveci:293

E1ZPD6              	100.00%		L0PF46              	100.00%
Bootstrap support for E1ZPD6 as seed ortholog is 100%.
Bootstrap support for L0PF46 as seed ortholog is 100%.

Group of orthologs #295. Best score 292 bits
Score difference with first non-orthologous sequence - C.variabilis:292 P.jiroveci:292

E1Z8V6              	100.00%		L0PD99              	100.00%
E1ZSV1              	52.12%		
Bootstrap support for E1Z8V6 as seed ortholog is 100%.
Bootstrap support for L0PD99 as seed ortholog is 100%.

Group of orthologs #296. Best score 291 bits
Score difference with first non-orthologous sequence - C.variabilis:291 P.jiroveci:209

E1ZEJ9              	100.00%		L0P8W4              	100.00%
Bootstrap support for E1ZEJ9 as seed ortholog is 100%.
Bootstrap support for L0P8W4 as seed ortholog is 100%.

Group of orthologs #297. Best score 289 bits
Score difference with first non-orthologous sequence - C.variabilis:289 P.jiroveci:289

E1Z472              	100.00%		L0PA94              	100.00%
Bootstrap support for E1Z472 as seed ortholog is 100%.
Bootstrap support for L0PA94 as seed ortholog is 100%.

Group of orthologs #298. Best score 289 bits
Score difference with first non-orthologous sequence - C.variabilis:289 P.jiroveci:289

E1ZJW8              	100.00%		L0P9U3              	100.00%
Bootstrap support for E1ZJW8 as seed ortholog is 100%.
Bootstrap support for L0P9U3 as seed ortholog is 100%.

Group of orthologs #299. Best score 288 bits
Score difference with first non-orthologous sequence - C.variabilis:288 P.jiroveci:288

E1ZCQ9              	100.00%		L0P891              	100.00%
Bootstrap support for E1ZCQ9 as seed ortholog is 100%.
Bootstrap support for L0P891 as seed ortholog is 100%.

Group of orthologs #300. Best score 288 bits
Score difference with first non-orthologous sequence - C.variabilis:288 P.jiroveci:288

E1ZL06              	100.00%		L0PFZ0              	100.00%
Bootstrap support for E1ZL06 as seed ortholog is 100%.
Bootstrap support for L0PFZ0 as seed ortholog is 100%.

Group of orthologs #301. Best score 288 bits
Score difference with first non-orthologous sequence - C.variabilis:5 P.jiroveci:288

E1ZQ05              	100.00%		L0PFY2              	100.00%
Bootstrap support for E1ZQ05 as seed ortholog is 44%.
Alternative seed ortholog is E1ZJ01 (5 bits away from this cluster)
Bootstrap support for L0PFY2 as seed ortholog is 100%.

Group of orthologs #302. Best score 287 bits
Score difference with first non-orthologous sequence - C.variabilis:202 P.jiroveci:287

E1Z373              	100.00%		L0PDT8              	100.00%
                    	       		L0P9R2              	89.34%
Bootstrap support for E1Z373 as seed ortholog is 100%.
Bootstrap support for L0PDT8 as seed ortholog is 100%.

Group of orthologs #303. Best score 287 bits
Score difference with first non-orthologous sequence - C.variabilis:287 P.jiroveci:287

E1ZTH9              	100.00%		L0P7Z1              	100.00%
Bootstrap support for E1ZTH9 as seed ortholog is 100%.
Bootstrap support for L0P7Z1 as seed ortholog is 100%.

Group of orthologs #304. Best score 286 bits
Score difference with first non-orthologous sequence - C.variabilis:204 P.jiroveci:286

E1Z2D0              	100.00%		L0PB28              	100.00%
Bootstrap support for E1Z2D0 as seed ortholog is 100%.
Bootstrap support for L0PB28 as seed ortholog is 100%.

Group of orthologs #305. Best score 286 bits
Score difference with first non-orthologous sequence - C.variabilis:286 P.jiroveci:286

E1ZQ83              	100.00%		L0PCY9              	100.00%
Bootstrap support for E1ZQ83 as seed ortholog is 100%.
Bootstrap support for L0PCY9 as seed ortholog is 100%.

Group of orthologs #306. Best score 284 bits
Score difference with first non-orthologous sequence - C.variabilis:284 P.jiroveci:284

E1ZQV5              	100.00%		L0PAG0              	100.00%
Bootstrap support for E1ZQV5 as seed ortholog is 100%.
Bootstrap support for L0PAG0 as seed ortholog is 100%.

Group of orthologs #307. Best score 283 bits
Score difference with first non-orthologous sequence - C.variabilis:144 P.jiroveci:283

E1ZF94              	100.00%		L0PGL1              	100.00%
E1Z493              	41.50%		
Bootstrap support for E1ZF94 as seed ortholog is 99%.
Bootstrap support for L0PGL1 as seed ortholog is 100%.

Group of orthologs #308. Best score 283 bits
Score difference with first non-orthologous sequence - C.variabilis:283 P.jiroveci:283

E1Z710              	100.00%		L0PEV9              	100.00%
Bootstrap support for E1Z710 as seed ortholog is 100%.
Bootstrap support for L0PEV9 as seed ortholog is 100%.

Group of orthologs #309. Best score 283 bits
Score difference with first non-orthologous sequence - C.variabilis:283 P.jiroveci:283

E1ZRW9              	100.00%		L0PDU2              	100.00%
Bootstrap support for E1ZRW9 as seed ortholog is 100%.
Bootstrap support for L0PDU2 as seed ortholog is 100%.

Group of orthologs #310. Best score 282 bits
Score difference with first non-orthologous sequence - C.variabilis:139 P.jiroveci:218

E1ZK10              	100.00%		L0P9F6              	100.00%
Bootstrap support for E1ZK10 as seed ortholog is 99%.
Bootstrap support for L0P9F6 as seed ortholog is 100%.

Group of orthologs #311. Best score 282 bits
Score difference with first non-orthologous sequence - C.variabilis:282 P.jiroveci:282

E1ZRE8              	100.00%		L0PCG0              	100.00%
Bootstrap support for E1ZRE8 as seed ortholog is 100%.
Bootstrap support for L0PCG0 as seed ortholog is 100%.

Group of orthologs #312. Best score 282 bits
Score difference with first non-orthologous sequence - C.variabilis:282 P.jiroveci:175

E1ZN67              	100.00%		L0PFS8              	100.00%
Bootstrap support for E1ZN67 as seed ortholog is 100%.
Bootstrap support for L0PFS8 as seed ortholog is 100%.

Group of orthologs #313. Best score 281 bits
Score difference with first non-orthologous sequence - C.variabilis:227 P.jiroveci:281

E1Z5L1              	100.00%		L0P8F5              	100.00%
Bootstrap support for E1Z5L1 as seed ortholog is 100%.
Bootstrap support for L0P8F5 as seed ortholog is 100%.

Group of orthologs #314. Best score 281 bits
Score difference with first non-orthologous sequence - C.variabilis:281 P.jiroveci:281

E1ZIV3              	100.00%		L0P9S5              	100.00%
Bootstrap support for E1ZIV3 as seed ortholog is 100%.
Bootstrap support for L0P9S5 as seed ortholog is 100%.

Group of orthologs #315. Best score 280 bits
Score difference with first non-orthologous sequence - C.variabilis:280 P.jiroveci:89

E1ZE49              	100.00%		L0PD02              	100.00%
Bootstrap support for E1ZE49 as seed ortholog is 100%.
Bootstrap support for L0PD02 as seed ortholog is 99%.

Group of orthologs #316. Best score 280 bits
Score difference with first non-orthologous sequence - C.variabilis:191 P.jiroveci:280

E1ZEF4              	100.00%		L0PDV0              	100.00%
Bootstrap support for E1ZEF4 as seed ortholog is 99%.
Bootstrap support for L0PDV0 as seed ortholog is 100%.

Group of orthologs #317. Best score 280 bits
Score difference with first non-orthologous sequence - C.variabilis:203 P.jiroveci:280

E1ZIS4              	100.00%		L0PDL9              	100.00%
Bootstrap support for E1ZIS4 as seed ortholog is 100%.
Bootstrap support for L0PDL9 as seed ortholog is 100%.

Group of orthologs #318. Best score 280 bits
Score difference with first non-orthologous sequence - C.variabilis:280 P.jiroveci:169

E1ZN83              	100.00%		L0PEC0              	100.00%
Bootstrap support for E1ZN83 as seed ortholog is 100%.
Bootstrap support for L0PEC0 as seed ortholog is 99%.

Group of orthologs #319. Best score 280 bits
Score difference with first non-orthologous sequence - C.variabilis:194 P.jiroveci:280

E1ZTU8              	100.00%		L0PA00              	100.00%
Bootstrap support for E1ZTU8 as seed ortholog is 100%.
Bootstrap support for L0PA00 as seed ortholog is 100%.

Group of orthologs #320. Best score 279 bits
Score difference with first non-orthologous sequence - C.variabilis:87 P.jiroveci:279

E1ZIH5              	100.00%		L0P9R8              	100.00%
Bootstrap support for E1ZIH5 as seed ortholog is 94%.
Bootstrap support for L0P9R8 as seed ortholog is 100%.

Group of orthologs #321. Best score 278 bits
Score difference with first non-orthologous sequence - C.variabilis:231 P.jiroveci:278

E1Z694              	100.00%		L0PHJ3              	100.00%
Bootstrap support for E1Z694 as seed ortholog is 100%.
Bootstrap support for L0PHJ3 as seed ortholog is 100%.

Group of orthologs #322. Best score 277 bits
Score difference with first non-orthologous sequence - C.variabilis:277 P.jiroveci:277

E1ZEM3              	100.00%		L0PE98              	100.00%
Bootstrap support for E1ZEM3 as seed ortholog is 100%.
Bootstrap support for L0PE98 as seed ortholog is 100%.

Group of orthologs #323. Best score 276 bits
Score difference with first non-orthologous sequence - C.variabilis:69 P.jiroveci:83

E1Z5N6              	100.00%		L0PF10              	100.00%
Bootstrap support for E1Z5N6 as seed ortholog is 97%.
Bootstrap support for L0PF10 as seed ortholog is 99%.

Group of orthologs #324. Best score 275 bits
Score difference with first non-orthologous sequence - C.variabilis:109 P.jiroveci:275

E1ZL77              	100.00%		L0P9U8              	100.00%
Bootstrap support for E1ZL77 as seed ortholog is 99%.
Bootstrap support for L0P9U8 as seed ortholog is 100%.

Group of orthologs #325. Best score 274 bits
Score difference with first non-orthologous sequence - C.variabilis:74 P.jiroveci:274

E1ZFI7              	100.00%		L0P7B5              	100.00%
Bootstrap support for E1ZFI7 as seed ortholog is 99%.
Bootstrap support for L0P7B5 as seed ortholog is 100%.

Group of orthologs #326. Best score 274 bits
Score difference with first non-orthologous sequence - C.variabilis:274 P.jiroveci:274

E1ZIC2              	100.00%		L0PEB2              	100.00%
Bootstrap support for E1ZIC2 as seed ortholog is 100%.
Bootstrap support for L0PEB2 as seed ortholog is 100%.

Group of orthologs #327. Best score 273 bits
Score difference with first non-orthologous sequence - C.variabilis:227 P.jiroveci:273

E1Z3F7              	100.00%		L0PF71              	100.00%
Bootstrap support for E1Z3F7 as seed ortholog is 100%.
Bootstrap support for L0PF71 as seed ortholog is 100%.

Group of orthologs #328. Best score 272 bits
Score difference with first non-orthologous sequence - C.variabilis:175 P.jiroveci:202

E1ZFM9              	100.00%		L0P8I7              	100.00%
Bootstrap support for E1ZFM9 as seed ortholog is 100%.
Bootstrap support for L0P8I7 as seed ortholog is 100%.

Group of orthologs #329. Best score 271 bits
Score difference with first non-orthologous sequence - C.variabilis:271 P.jiroveci:271

E1Z5N2              	100.00%		L0PAJ2              	100.00%
Bootstrap support for E1Z5N2 as seed ortholog is 100%.
Bootstrap support for L0PAJ2 as seed ortholog is 100%.

Group of orthologs #330. Best score 271 bits
Score difference with first non-orthologous sequence - C.variabilis:271 P.jiroveci:169

E1ZHW7              	100.00%		L0PFU1              	100.00%
Bootstrap support for E1ZHW7 as seed ortholog is 100%.
Bootstrap support for L0PFU1 as seed ortholog is 100%.

Group of orthologs #331. Best score 271 bits
Score difference with first non-orthologous sequence - C.variabilis:271 P.jiroveci:271

E1ZLT3              	100.00%		L0PEM3              	100.00%
Bootstrap support for E1ZLT3 as seed ortholog is 100%.
Bootstrap support for L0PEM3 as seed ortholog is 100%.

Group of orthologs #332. Best score 270 bits
Score difference with first non-orthologous sequence - C.variabilis:270 P.jiroveci:270

E1Z4Y7              	100.00%		L0PGC4              	100.00%
Bootstrap support for E1Z4Y7 as seed ortholog is 100%.
Bootstrap support for L0PGC4 as seed ortholog is 100%.

Group of orthologs #333. Best score 270 bits
Score difference with first non-orthologous sequence - C.variabilis:270 P.jiroveci:270

E1ZIM3              	100.00%		L0PCR1              	100.00%
Bootstrap support for E1ZIM3 as seed ortholog is 100%.
Bootstrap support for L0PCR1 as seed ortholog is 100%.

Group of orthologs #334. Best score 270 bits
Score difference with first non-orthologous sequence - C.variabilis:270 P.jiroveci:270

E1ZMY1              	100.00%		L0PFC2              	100.00%
Bootstrap support for E1ZMY1 as seed ortholog is 100%.
Bootstrap support for L0PFC2 as seed ortholog is 100%.

Group of orthologs #335. Best score 269 bits
Score difference with first non-orthologous sequence - C.variabilis:269 P.jiroveci:269

E1ZF36              	100.00%		L0PCK3              	100.00%
Bootstrap support for E1ZF36 as seed ortholog is 100%.
Bootstrap support for L0PCK3 as seed ortholog is 100%.

Group of orthologs #336. Best score 268 bits
Score difference with first non-orthologous sequence - C.variabilis:268 P.jiroveci:268

E1ZGZ9              	100.00%		L0PDV1              	100.00%
Bootstrap support for E1ZGZ9 as seed ortholog is 100%.
Bootstrap support for L0PDV1 as seed ortholog is 100%.

Group of orthologs #337. Best score 268 bits
Score difference with first non-orthologous sequence - C.variabilis:158 P.jiroveci:181

E1ZNZ1              	100.00%		L0PGP6              	100.00%
Bootstrap support for E1ZNZ1 as seed ortholog is 100%.
Bootstrap support for L0PGP6 as seed ortholog is 100%.

Group of orthologs #338. Best score 267 bits
Score difference with first non-orthologous sequence - C.variabilis:209 P.jiroveci:267

E1Z970              	100.00%		L0PDB7              	100.00%
Bootstrap support for E1Z970 as seed ortholog is 100%.
Bootstrap support for L0PDB7 as seed ortholog is 100%.

Group of orthologs #339. Best score 267 bits
Score difference with first non-orthologous sequence - C.variabilis:267 P.jiroveci:267

E1ZQR8              	100.00%		L0PBN2              	100.00%
Bootstrap support for E1ZQR8 as seed ortholog is 100%.
Bootstrap support for L0PBN2 as seed ortholog is 100%.

Group of orthologs #340. Best score 265 bits
Score difference with first non-orthologous sequence - C.variabilis:188 P.jiroveci:198

E1Z6I6              	100.00%		L0PGE3              	100.00%
                    	       		L0PEY7              	47.89%
Bootstrap support for E1Z6I6 as seed ortholog is 100%.
Bootstrap support for L0PGE3 as seed ortholog is 100%.

Group of orthologs #341. Best score 265 bits
Score difference with first non-orthologous sequence - C.variabilis:60 P.jiroveci:265

E1Z5X5              	100.00%		L0PA23              	100.00%
Bootstrap support for E1Z5X5 as seed ortholog is 96%.
Bootstrap support for L0PA23 as seed ortholog is 100%.

Group of orthologs #342. Best score 265 bits
Score difference with first non-orthologous sequence - C.variabilis:211 P.jiroveci:265

E1ZBN4              	100.00%		L0PBQ1              	100.00%
Bootstrap support for E1ZBN4 as seed ortholog is 100%.
Bootstrap support for L0PBQ1 as seed ortholog is 100%.

Group of orthologs #343. Best score 265 bits
Score difference with first non-orthologous sequence - C.variabilis:265 P.jiroveci:265

E1ZH34              	100.00%		L0P9S7              	100.00%
Bootstrap support for E1ZH34 as seed ortholog is 100%.
Bootstrap support for L0P9S7 as seed ortholog is 100%.

Group of orthologs #344. Best score 264 bits
Score difference with first non-orthologous sequence - C.variabilis:264 P.jiroveci:264

E1ZAZ5              	100.00%		L0PB54              	100.00%
Bootstrap support for E1ZAZ5 as seed ortholog is 100%.
Bootstrap support for L0PB54 as seed ortholog is 100%.

Group of orthologs #345. Best score 263 bits
Score difference with first non-orthologous sequence - C.variabilis:263 P.jiroveci:263

E1ZCJ5              	100.00%		L0PDY1              	100.00%
Bootstrap support for E1ZCJ5 as seed ortholog is 100%.
Bootstrap support for L0PDY1 as seed ortholog is 100%.

Group of orthologs #346. Best score 262 bits
Score difference with first non-orthologous sequence - C.variabilis:262 P.jiroveci:262

E1ZLU6              	100.00%		L0PC44              	100.00%
Bootstrap support for E1ZLU6 as seed ortholog is 100%.
Bootstrap support for L0PC44 as seed ortholog is 100%.

Group of orthologs #347. Best score 261 bits
Score difference with first non-orthologous sequence - C.variabilis:261 P.jiroveci:27

E1ZDR7              	100.00%		L0PHY6              	100.00%
Bootstrap support for E1ZDR7 as seed ortholog is 100%.
Bootstrap support for L0PHY6 as seed ortholog is 100%.

Group of orthologs #348. Best score 260 bits
Score difference with first non-orthologous sequence - C.variabilis:171 P.jiroveci:260

E1ZNT5              	100.00%		L0PGR0              	100.00%
E1ZCE4              	10.89%		
E1Z2H7              	9.75%		
E1Z5Z3              	8.60%		
Bootstrap support for E1ZNT5 as seed ortholog is 99%.
Bootstrap support for L0PGR0 as seed ortholog is 100%.

Group of orthologs #349. Best score 258 bits
Score difference with first non-orthologous sequence - C.variabilis:258 P.jiroveci:258

E1ZRL7              	100.00%		L0PAR8              	100.00%
Bootstrap support for E1ZRL7 as seed ortholog is 100%.
Bootstrap support for L0PAR8 as seed ortholog is 100%.

Group of orthologs #350. Best score 257 bits
Score difference with first non-orthologous sequence - C.variabilis:257 P.jiroveci:257

E1Z3U7              	100.00%		L0P9S4              	100.00%
Bootstrap support for E1Z3U7 as seed ortholog is 100%.
Bootstrap support for L0P9S4 as seed ortholog is 100%.

Group of orthologs #351. Best score 257 bits
Score difference with first non-orthologous sequence - C.variabilis:257 P.jiroveci:257

E1Z5S8              	100.00%		L0PF49              	100.00%
Bootstrap support for E1Z5S8 as seed ortholog is 100%.
Bootstrap support for L0PF49 as seed ortholog is 100%.

Group of orthologs #352. Best score 257 bits
Score difference with first non-orthologous sequence - C.variabilis:184 P.jiroveci:257

E1ZLK2              	100.00%		L0PG86              	100.00%
Bootstrap support for E1ZLK2 as seed ortholog is 100%.
Bootstrap support for L0PG86 as seed ortholog is 100%.

Group of orthologs #353. Best score 257 bits
Score difference with first non-orthologous sequence - C.variabilis:257 P.jiroveci:257

E1ZPN5              	100.00%		L0PED5              	100.00%
Bootstrap support for E1ZPN5 as seed ortholog is 100%.
Bootstrap support for L0PED5 as seed ortholog is 100%.

Group of orthologs #354. Best score 256 bits
Score difference with first non-orthologous sequence - C.variabilis:82 P.jiroveci:152

E1ZDJ7              	100.00%		L0PB10              	100.00%
Bootstrap support for E1ZDJ7 as seed ortholog is 99%.
Bootstrap support for L0PB10 as seed ortholog is 100%.

Group of orthologs #355. Best score 256 bits
Score difference with first non-orthologous sequence - C.variabilis:76 P.jiroveci:14

E1ZL24              	100.00%		L0P9E4              	100.00%
Bootstrap support for E1ZL24 as seed ortholog is 99%.
Bootstrap support for L0P9E4 as seed ortholog is 71%.
Alternative seed ortholog is L0PC59 (14 bits away from this cluster)

Group of orthologs #356. Best score 256 bits
Score difference with first non-orthologous sequence - C.variabilis:256 P.jiroveci:256

E1ZK67              	100.00%		L0PBK8              	100.00%
Bootstrap support for E1ZK67 as seed ortholog is 100%.
Bootstrap support for L0PBK8 as seed ortholog is 100%.

Group of orthologs #357. Best score 255 bits
Score difference with first non-orthologous sequence - C.variabilis:212 P.jiroveci:255

E1Z6F9              	100.00%		L0PCJ2              	100.00%
Bootstrap support for E1Z6F9 as seed ortholog is 100%.
Bootstrap support for L0PCJ2 as seed ortholog is 100%.

Group of orthologs #358. Best score 255 bits
Score difference with first non-orthologous sequence - C.variabilis:255 P.jiroveci:132

E1ZGL8              	100.00%		L0PB03              	100.00%
Bootstrap support for E1ZGL8 as seed ortholog is 100%.
Bootstrap support for L0PB03 as seed ortholog is 99%.

Group of orthologs #359. Best score 255 bits
Score difference with first non-orthologous sequence - C.variabilis:255 P.jiroveci:255

E1ZIX7              	100.00%		L0PCL9              	100.00%
Bootstrap support for E1ZIX7 as seed ortholog is 100%.
Bootstrap support for L0PCL9 as seed ortholog is 100%.

Group of orthologs #360. Best score 254 bits
Score difference with first non-orthologous sequence - C.variabilis:126 P.jiroveci:155

E1ZLQ0              	100.00%		L0PBM6              	100.00%
Bootstrap support for E1ZLQ0 as seed ortholog is 99%.
Bootstrap support for L0PBM6 as seed ortholog is 99%.

Group of orthologs #361. Best score 254 bits
Score difference with first non-orthologous sequence - C.variabilis:254 P.jiroveci:135

E1ZQ60              	100.00%		L0PHI3              	100.00%
Bootstrap support for E1ZQ60 as seed ortholog is 100%.
Bootstrap support for L0PHI3 as seed ortholog is 99%.

Group of orthologs #362. Best score 253 bits
Score difference with first non-orthologous sequence - C.variabilis:253 P.jiroveci:253

E1Z5F8              	100.00%		L0P908              	100.00%
                    	       		L0P912              	100.00%
Bootstrap support for E1Z5F8 as seed ortholog is 100%.
Bootstrap support for L0P908 as seed ortholog is 100%.
Bootstrap support for L0P912 as seed ortholog is 100%.

Group of orthologs #363. Best score 253 bits
Score difference with first non-orthologous sequence - C.variabilis:253 P.jiroveci:253

E1Z2J7              	100.00%		L0PC62              	100.00%
Bootstrap support for E1Z2J7 as seed ortholog is 100%.
Bootstrap support for L0PC62 as seed ortholog is 100%.

Group of orthologs #364. Best score 253 bits
Score difference with first non-orthologous sequence - C.variabilis:54 P.jiroveci:145

E1ZJU9              	100.00%		L0P876              	100.00%
Bootstrap support for E1ZJU9 as seed ortholog is 98%.
Bootstrap support for L0P876 as seed ortholog is 100%.

Group of orthologs #365. Best score 252 bits
Score difference with first non-orthologous sequence - C.variabilis:252 P.jiroveci:252

E1ZCT7              	100.00%		L0PBM9              	100.00%
Bootstrap support for E1ZCT7 as seed ortholog is 100%.
Bootstrap support for L0PBM9 as seed ortholog is 100%.

Group of orthologs #366. Best score 251 bits
Score difference with first non-orthologous sequence - C.variabilis:251 P.jiroveci:31

E1Z570              	100.00%		L0PD43              	100.00%
Bootstrap support for E1Z570 as seed ortholog is 100%.
Bootstrap support for L0PD43 as seed ortholog is 84%.

Group of orthologs #367. Best score 250 bits
Score difference with first non-orthologous sequence - C.variabilis:250 P.jiroveci:250

E1Z7P9              	100.00%		L0PHK3              	100.00%
Bootstrap support for E1Z7P9 as seed ortholog is 100%.
Bootstrap support for L0PHK3 as seed ortholog is 100%.

Group of orthologs #368. Best score 249 bits
Score difference with first non-orthologous sequence - C.variabilis:26 P.jiroveci:249

E1ZL19              	100.00%		L0PE26              	100.00%
                    	       		L0PEP2              	14.86%
Bootstrap support for E1ZL19 as seed ortholog is 66%.
Alternative seed ortholog is E1Z2I8 (26 bits away from this cluster)
Bootstrap support for L0PE26 as seed ortholog is 100%.

Group of orthologs #369. Best score 249 bits
Score difference with first non-orthologous sequence - C.variabilis:249 P.jiroveci:249

E1ZPB0              	100.00%		L0P8K8              	100.00%
Bootstrap support for E1ZPB0 as seed ortholog is 100%.
Bootstrap support for L0P8K8 as seed ortholog is 100%.

Group of orthologs #370. Best score 247 bits
Score difference with first non-orthologous sequence - C.variabilis:247 P.jiroveci:247

E1ZEB4              	100.00%		L0PD34              	100.00%
Bootstrap support for E1ZEB4 as seed ortholog is 100%.
Bootstrap support for L0PD34 as seed ortholog is 100%.

Group of orthologs #371. Best score 246 bits
Score difference with first non-orthologous sequence - C.variabilis:190 P.jiroveci:246

E1ZH67              	100.00%		L0PHK8              	100.00%
Bootstrap support for E1ZH67 as seed ortholog is 100%.
Bootstrap support for L0PHK8 as seed ortholog is 100%.

Group of orthologs #372. Best score 245 bits
Score difference with first non-orthologous sequence - C.variabilis:245 P.jiroveci:245

E1ZIH1              	100.00%		L0P9B8              	100.00%
Bootstrap support for E1ZIH1 as seed ortholog is 100%.
Bootstrap support for L0P9B8 as seed ortholog is 100%.

Group of orthologs #373. Best score 245 bits
Score difference with first non-orthologous sequence - C.variabilis:245 P.jiroveci:245

E1ZK41              	100.00%		L0PDT4              	100.00%
Bootstrap support for E1ZK41 as seed ortholog is 100%.
Bootstrap support for L0PDT4 as seed ortholog is 100%.

Group of orthologs #374. Best score 244 bits
Score difference with first non-orthologous sequence - C.variabilis:244 P.jiroveci:244

E1ZD04              	100.00%		L0P9C8              	100.00%
Bootstrap support for E1ZD04 as seed ortholog is 100%.
Bootstrap support for L0P9C8 as seed ortholog is 100%.

Group of orthologs #375. Best score 243 bits
Score difference with first non-orthologous sequence - C.variabilis:243 P.jiroveci:243

E1Z3E1              	100.00%		L0P8J2              	100.00%
Bootstrap support for E1Z3E1 as seed ortholog is 100%.
Bootstrap support for L0P8J2 as seed ortholog is 100%.

Group of orthologs #376. Best score 243 bits
Score difference with first non-orthologous sequence - C.variabilis:243 P.jiroveci:243

E1Z4A6              	100.00%		L0PDA9              	100.00%
Bootstrap support for E1Z4A6 as seed ortholog is 100%.
Bootstrap support for L0PDA9 as seed ortholog is 100%.

Group of orthologs #377. Best score 243 bits
Score difference with first non-orthologous sequence - C.variabilis:25 P.jiroveci:41

E1ZHU8              	100.00%		L0PD71              	100.00%
Bootstrap support for E1ZHU8 as seed ortholog is 73%.
Alternative seed ortholog is E1ZM54 (25 bits away from this cluster)
Bootstrap support for L0PD71 as seed ortholog is 88%.

Group of orthologs #378. Best score 243 bits
Score difference with first non-orthologous sequence - C.variabilis:243 P.jiroveci:243

E1ZRS0              	100.00%		L0PA72              	100.00%
Bootstrap support for E1ZRS0 as seed ortholog is 100%.
Bootstrap support for L0PA72 as seed ortholog is 100%.

Group of orthologs #379. Best score 242 bits
Score difference with first non-orthologous sequence - C.variabilis:150 P.jiroveci:138

E1ZDM9              	100.00%		L0PFY7              	100.00%
Bootstrap support for E1ZDM9 as seed ortholog is 100%.
Bootstrap support for L0PFY7 as seed ortholog is 99%.

Group of orthologs #380. Best score 242 bits
Score difference with first non-orthologous sequence - C.variabilis:242 P.jiroveci:242

E1ZRU4              	100.00%		L0P784              	100.00%
Bootstrap support for E1ZRU4 as seed ortholog is 100%.
Bootstrap support for L0P784 as seed ortholog is 100%.

Group of orthologs #381. Best score 242 bits
Score difference with first non-orthologous sequence - C.variabilis:242 P.jiroveci:242

E1ZQ36              	100.00%		L0P9K4              	100.00%
Bootstrap support for E1ZQ36 as seed ortholog is 100%.
Bootstrap support for L0P9K4 as seed ortholog is 100%.

Group of orthologs #382. Best score 241 bits
Score difference with first non-orthologous sequence - C.variabilis:194 P.jiroveci:241

E1Z3Q2              	100.00%		L0P8I1              	100.00%
Bootstrap support for E1Z3Q2 as seed ortholog is 100%.
Bootstrap support for L0P8I1 as seed ortholog is 100%.

Group of orthologs #383. Best score 241 bits
Score difference with first non-orthologous sequence - C.variabilis:241 P.jiroveci:241

E1ZG20              	100.00%		L0P9P0              	100.00%
Bootstrap support for E1ZG20 as seed ortholog is 100%.
Bootstrap support for L0P9P0 as seed ortholog is 100%.

Group of orthologs #384. Best score 241 bits
Score difference with first non-orthologous sequence - C.variabilis:241 P.jiroveci:151

E1ZQQ9              	100.00%		L0PBV6              	100.00%
Bootstrap support for E1ZQQ9 as seed ortholog is 100%.
Bootstrap support for L0PBV6 as seed ortholog is 100%.

Group of orthologs #385. Best score 240 bits
Score difference with first non-orthologous sequence - C.variabilis:125 P.jiroveci:240

E1ZTC4              	100.00%		L0PEZ2              	100.00%
                    	       		L0PH30              	88.38%
Bootstrap support for E1ZTC4 as seed ortholog is 99%.
Bootstrap support for L0PEZ2 as seed ortholog is 100%.

Group of orthologs #386. Best score 240 bits
Score difference with first non-orthologous sequence - C.variabilis:163 P.jiroveci:141

E1ZAR4              	100.00%		L0PE04              	100.00%
Bootstrap support for E1ZAR4 as seed ortholog is 99%.
Bootstrap support for L0PE04 as seed ortholog is 99%.

Group of orthologs #387. Best score 240 bits
Score difference with first non-orthologous sequence - C.variabilis:240 P.jiroveci:91

E1ZRX8              	100.00%		L0PDG3              	100.00%
Bootstrap support for E1ZRX8 as seed ortholog is 100%.
Bootstrap support for L0PDG3 as seed ortholog is 99%.

Group of orthologs #388. Best score 239 bits
Score difference with first non-orthologous sequence - C.variabilis:183 P.jiroveci:239

E1ZA79              	100.00%		L0PET2              	100.00%
                    	       		L0PAE5              	85.38%
Bootstrap support for E1ZA79 as seed ortholog is 100%.
Bootstrap support for L0PET2 as seed ortholog is 100%.

Group of orthologs #389. Best score 239 bits
Score difference with first non-orthologous sequence - C.variabilis:239 P.jiroveci:239

E1ZRI2              	100.00%		L0PAW9              	100.00%
                    	       		L0PBZ0              	87.53%
Bootstrap support for E1ZRI2 as seed ortholog is 100%.
Bootstrap support for L0PAW9 as seed ortholog is 100%.

Group of orthologs #390. Best score 239 bits
Score difference with first non-orthologous sequence - C.variabilis:239 P.jiroveci:239

E1Z866              	100.00%		L0PHG7              	100.00%
Bootstrap support for E1Z866 as seed ortholog is 100%.
Bootstrap support for L0PHG7 as seed ortholog is 100%.

Group of orthologs #391. Best score 239 bits
Score difference with first non-orthologous sequence - C.variabilis:239 P.jiroveci:239

E1ZLE6              	100.00%		L0P7H2              	100.00%
Bootstrap support for E1ZLE6 as seed ortholog is 100%.
Bootstrap support for L0P7H2 as seed ortholog is 100%.

Group of orthologs #392. Best score 238 bits
Score difference with first non-orthologous sequence - C.variabilis:238 P.jiroveci:238

E1Z830              	100.00%		L0P8N3              	100.00%
Bootstrap support for E1Z830 as seed ortholog is 100%.
Bootstrap support for L0P8N3 as seed ortholog is 100%.

Group of orthologs #393. Best score 238 bits
Score difference with first non-orthologous sequence - C.variabilis:238 P.jiroveci:238

E1Z8M2              	100.00%		L0PB18              	100.00%
Bootstrap support for E1Z8M2 as seed ortholog is 100%.
Bootstrap support for L0PB18 as seed ortholog is 100%.

Group of orthologs #394. Best score 238 bits
Score difference with first non-orthologous sequence - C.variabilis:99 P.jiroveci:238

E1ZIQ2              	100.00%		L0PEX1              	100.00%
Bootstrap support for E1ZIQ2 as seed ortholog is 99%.
Bootstrap support for L0PEX1 as seed ortholog is 100%.

Group of orthologs #395. Best score 238 bits
Score difference with first non-orthologous sequence - C.variabilis:238 P.jiroveci:238

E1ZRT1              	100.00%		L0PFE9              	100.00%
Bootstrap support for E1ZRT1 as seed ortholog is 100%.
Bootstrap support for L0PFE9 as seed ortholog is 100%.

Group of orthologs #396. Best score 237 bits
Score difference with first non-orthologous sequence - C.variabilis:237 P.jiroveci:106

E1ZFP6              	100.00%		L0P6V9              	100.00%
                    	       		L0PBF0              	9.26%
Bootstrap support for E1ZFP6 as seed ortholog is 100%.
Bootstrap support for L0P6V9 as seed ortholog is 99%.

Group of orthologs #397. Best score 237 bits
Score difference with first non-orthologous sequence - C.variabilis:18 P.jiroveci:237

E1Z9N0              	100.00%		L0P8V0              	100.00%
Bootstrap support for E1Z9N0 as seed ortholog is 43%.
Alternative seed ortholog is E1ZAS0 (18 bits away from this cluster)
Bootstrap support for L0P8V0 as seed ortholog is 100%.

Group of orthologs #398. Best score 237 bits
Score difference with first non-orthologous sequence - C.variabilis:237 P.jiroveci:237

E1Z960              	100.00%		L0PH54              	100.00%
Bootstrap support for E1Z960 as seed ortholog is 100%.
Bootstrap support for L0PH54 as seed ortholog is 100%.

Group of orthologs #399. Best score 236 bits
Score difference with first non-orthologous sequence - C.variabilis:236 P.jiroveci:236

E1Z4H6              	100.00%		L0PBI2              	100.00%
Bootstrap support for E1Z4H6 as seed ortholog is 100%.
Bootstrap support for L0PBI2 as seed ortholog is 100%.

Group of orthologs #400. Best score 235 bits
Score difference with first non-orthologous sequence - C.variabilis:80 P.jiroveci:235

E1ZAS5              	100.00%		L0PE74              	100.00%
Bootstrap support for E1ZAS5 as seed ortholog is 97%.
Bootstrap support for L0PE74 as seed ortholog is 100%.

Group of orthologs #401. Best score 235 bits
Score difference with first non-orthologous sequence - C.variabilis:235 P.jiroveci:235

E1ZFK8              	100.00%		L0PBX2              	100.00%
Bootstrap support for E1ZFK8 as seed ortholog is 100%.
Bootstrap support for L0PBX2 as seed ortholog is 100%.

Group of orthologs #402. Best score 235 bits
Score difference with first non-orthologous sequence - C.variabilis:89 P.jiroveci:235

E1ZJL6              	100.00%		L0PAG1              	100.00%
Bootstrap support for E1ZJL6 as seed ortholog is 98%.
Bootstrap support for L0PAG1 as seed ortholog is 100%.

Group of orthologs #403. Best score 234 bits
Score difference with first non-orthologous sequence - C.variabilis:234 P.jiroveci:234

E1Z2N4              	100.00%		L0P914              	100.00%
Bootstrap support for E1Z2N4 as seed ortholog is 100%.
Bootstrap support for L0P914 as seed ortholog is 100%.

Group of orthologs #404. Best score 234 bits
Score difference with first non-orthologous sequence - C.variabilis:145 P.jiroveci:138

E1Z4N9              	100.00%		L0PFK0              	100.00%
Bootstrap support for E1Z4N9 as seed ortholog is 99%.
Bootstrap support for L0PFK0 as seed ortholog is 99%.

Group of orthologs #405. Best score 233 bits
Score difference with first non-orthologous sequence - C.variabilis:144 P.jiroveci:159

E1Z804              	100.00%		L0PIJ3              	100.00%
                    	       		L0PEP1              	83.29%
Bootstrap support for E1Z804 as seed ortholog is 99%.
Bootstrap support for L0PIJ3 as seed ortholog is 99%.

Group of orthologs #406. Best score 233 bits
Score difference with first non-orthologous sequence - C.variabilis:233 P.jiroveci:233

E1Z8V2              	100.00%		L0P9G9              	100.00%
Bootstrap support for E1Z8V2 as seed ortholog is 100%.
Bootstrap support for L0P9G9 as seed ortholog is 100%.

Group of orthologs #407. Best score 233 bits
Score difference with first non-orthologous sequence - C.variabilis:233 P.jiroveci:233

E1ZTX8              	100.00%		L0PCQ7              	100.00%
Bootstrap support for E1ZTX8 as seed ortholog is 100%.
Bootstrap support for L0PCQ7 as seed ortholog is 100%.

Group of orthologs #408. Best score 232 bits
Score difference with first non-orthologous sequence - C.variabilis:143 P.jiroveci:167

E1ZJW9              	100.00%		L0PFK8              	100.00%
                    	       		L0PCW4              	11.50%
Bootstrap support for E1ZJW9 as seed ortholog is 99%.
Bootstrap support for L0PFK8 as seed ortholog is 99%.

Group of orthologs #409. Best score 232 bits
Score difference with first non-orthologous sequence - C.variabilis:232 P.jiroveci:232

E1ZKB3              	100.00%		L0PF73              	100.00%
E1ZJ95              	21.17%		
Bootstrap support for E1ZKB3 as seed ortholog is 100%.
Bootstrap support for L0PF73 as seed ortholog is 100%.

Group of orthologs #410. Best score 232 bits
Score difference with first non-orthologous sequence - C.variabilis:232 P.jiroveci:232

E1ZIA2              	100.00%		L0PID4              	100.00%
                    	       		L0PGF7              	34.98%
Bootstrap support for E1ZIA2 as seed ortholog is 100%.
Bootstrap support for L0PID4 as seed ortholog is 100%.

Group of orthologs #411. Best score 232 bits
Score difference with first non-orthologous sequence - C.variabilis:232 P.jiroveci:232

E1Z4P7              	100.00%		L0PG02              	100.00%
Bootstrap support for E1Z4P7 as seed ortholog is 100%.
Bootstrap support for L0PG02 as seed ortholog is 100%.

Group of orthologs #412. Best score 232 bits
Score difference with first non-orthologous sequence - C.variabilis:232 P.jiroveci:232

E1ZBH4              	100.00%		L0PG08              	100.00%
Bootstrap support for E1ZBH4 as seed ortholog is 100%.
Bootstrap support for L0PG08 as seed ortholog is 100%.

Group of orthologs #413. Best score 232 bits
Score difference with first non-orthologous sequence - C.variabilis:232 P.jiroveci:232

E1ZLF1              	100.00%		L0PCU0              	100.00%
Bootstrap support for E1ZLF1 as seed ortholog is 100%.
Bootstrap support for L0PCU0 as seed ortholog is 100%.

Group of orthologs #414. Best score 231 bits
Score difference with first non-orthologous sequence - C.variabilis:179 P.jiroveci:231

E1ZGA5              	100.00%		L0P8X1              	100.00%
Bootstrap support for E1ZGA5 as seed ortholog is 99%.
Bootstrap support for L0P8X1 as seed ortholog is 100%.

Group of orthologs #415. Best score 230 bits
Score difference with first non-orthologous sequence - C.variabilis:183 P.jiroveci:230

E1Z794              	100.00%		L0PHN0              	100.00%
Bootstrap support for E1Z794 as seed ortholog is 99%.
Bootstrap support for L0PHN0 as seed ortholog is 100%.

Group of orthologs #416. Best score 230 bits
Score difference with first non-orthologous sequence - C.variabilis:157 P.jiroveci:230

E1ZB67              	100.00%		L0PDC7              	100.00%
Bootstrap support for E1ZB67 as seed ortholog is 99%.
Bootstrap support for L0PDC7 as seed ortholog is 100%.

Group of orthologs #417. Best score 230 bits
Score difference with first non-orthologous sequence - C.variabilis:230 P.jiroveci:230

E1ZDI9              	100.00%		L0PCY0              	100.00%
Bootstrap support for E1ZDI9 as seed ortholog is 100%.
Bootstrap support for L0PCY0 as seed ortholog is 100%.

Group of orthologs #418. Best score 230 bits
Score difference with first non-orthologous sequence - C.variabilis:147 P.jiroveci:152

E1ZHF6              	100.00%		L0PA88              	100.00%
Bootstrap support for E1ZHF6 as seed ortholog is 99%.
Bootstrap support for L0PA88 as seed ortholog is 99%.

Group of orthologs #419. Best score 230 bits
Score difference with first non-orthologous sequence - C.variabilis:230 P.jiroveci:230

E1ZPH0              	100.00%		L0P7Q3              	100.00%
Bootstrap support for E1ZPH0 as seed ortholog is 100%.
Bootstrap support for L0P7Q3 as seed ortholog is 100%.

Group of orthologs #420. Best score 228 bits
Score difference with first non-orthologous sequence - C.variabilis:228 P.jiroveci:228

E1ZCR5              	100.00%		L0PEG2              	100.00%
Bootstrap support for E1ZCR5 as seed ortholog is 100%.
Bootstrap support for L0PEG2 as seed ortholog is 100%.

Group of orthologs #421. Best score 228 bits
Score difference with first non-orthologous sequence - C.variabilis:100 P.jiroveci:228

E1ZQ72              	100.00%		L0PGG0              	100.00%
Bootstrap support for E1ZQ72 as seed ortholog is 98%.
Bootstrap support for L0PGG0 as seed ortholog is 100%.

Group of orthologs #422. Best score 228 bits
Score difference with first non-orthologous sequence - C.variabilis:117 P.jiroveci:124

E1ZQM1              	100.00%		L0PGH8              	100.00%
Bootstrap support for E1ZQM1 as seed ortholog is 99%.
Bootstrap support for L0PGH8 as seed ortholog is 99%.

Group of orthologs #423. Best score 227 bits
Score difference with first non-orthologous sequence - C.variabilis:227 P.jiroveci:227

E1ZBK3              	100.00%		L0PGV8              	100.00%
Bootstrap support for E1ZBK3 as seed ortholog is 100%.
Bootstrap support for L0PGV8 as seed ortholog is 100%.

Group of orthologs #424. Best score 227 bits
Score difference with first non-orthologous sequence - C.variabilis:63 P.jiroveci:227

E1ZMW8              	100.00%		L0PBL5              	100.00%
Bootstrap support for E1ZMW8 as seed ortholog is 97%.
Bootstrap support for L0PBL5 as seed ortholog is 100%.

Group of orthologs #425. Best score 225 bits
Score difference with first non-orthologous sequence - C.variabilis:84 P.jiroveci:136

E1Z846              	100.00%		L0PDA0              	100.00%
Bootstrap support for E1Z846 as seed ortholog is 99%.
Bootstrap support for L0PDA0 as seed ortholog is 99%.

Group of orthologs #426. Best score 224 bits
Score difference with first non-orthologous sequence - C.variabilis:224 P.jiroveci:137

E1Z6D8              	100.00%		L0P834              	100.00%
Bootstrap support for E1Z6D8 as seed ortholog is 100%.
Bootstrap support for L0P834 as seed ortholog is 99%.

Group of orthologs #427. Best score 223 bits
Score difference with first non-orthologous sequence - C.variabilis:223 P.jiroveci:83

E1Z8F3              	100.00%		L0PCV1              	100.00%
Bootstrap support for E1Z8F3 as seed ortholog is 100%.
Bootstrap support for L0PCV1 as seed ortholog is 99%.

Group of orthologs #428. Best score 223 bits
Score difference with first non-orthologous sequence - C.variabilis:173 P.jiroveci:223

E1ZER2              	100.00%		L0P949              	100.00%
Bootstrap support for E1ZER2 as seed ortholog is 100%.
Bootstrap support for L0P949 as seed ortholog is 100%.

Group of orthologs #429. Best score 222 bits
Score difference with first non-orthologous sequence - C.variabilis:222 P.jiroveci:154

E1ZDU2              	100.00%		L0PDR6              	100.00%
Bootstrap support for E1ZDU2 as seed ortholog is 100%.
Bootstrap support for L0PDR6 as seed ortholog is 99%.

Group of orthologs #430. Best score 222 bits
Score difference with first non-orthologous sequence - C.variabilis:222 P.jiroveci:222

E1ZQ20              	100.00%		L0P896              	100.00%
Bootstrap support for E1ZQ20 as seed ortholog is 100%.
Bootstrap support for L0P896 as seed ortholog is 100%.

Group of orthologs #431. Best score 222 bits
Score difference with first non-orthologous sequence - C.variabilis:61 P.jiroveci:222

E1ZQX9              	100.00%		L0PG43              	100.00%
Bootstrap support for E1ZQX9 as seed ortholog is 93%.
Bootstrap support for L0PG43 as seed ortholog is 100%.

Group of orthologs #432. Best score 220 bits
Score difference with first non-orthologous sequence - C.variabilis:220 P.jiroveci:220

E1Z5C6              	100.00%		L0P8X6              	100.00%
Bootstrap support for E1Z5C6 as seed ortholog is 100%.
Bootstrap support for L0P8X6 as seed ortholog is 100%.

Group of orthologs #433. Best score 220 bits
Score difference with first non-orthologous sequence - C.variabilis:220 P.jiroveci:220

E1ZJD8              	100.00%		L0P9I2              	100.00%
Bootstrap support for E1ZJD8 as seed ortholog is 100%.
Bootstrap support for L0P9I2 as seed ortholog is 100%.

Group of orthologs #434. Best score 220 bits
Score difference with first non-orthologous sequence - C.variabilis:220 P.jiroveci:220

E1ZCL3              	100.00%		L0PHL1              	100.00%
Bootstrap support for E1ZCL3 as seed ortholog is 100%.
Bootstrap support for L0PHL1 as seed ortholog is 100%.

Group of orthologs #435. Best score 220 bits
Score difference with first non-orthologous sequence - C.variabilis:220 P.jiroveci:220

E1ZJD7              	100.00%		L0PAE9              	100.00%
Bootstrap support for E1ZJD7 as seed ortholog is 100%.
Bootstrap support for L0PAE9 as seed ortholog is 100%.

Group of orthologs #436. Best score 220 bits
Score difference with first non-orthologous sequence - C.variabilis:220 P.jiroveci:220

E1ZPC5              	100.00%		L0PDI7              	100.00%
Bootstrap support for E1ZPC5 as seed ortholog is 100%.
Bootstrap support for L0PDI7 as seed ortholog is 100%.

Group of orthologs #437. Best score 219 bits
Score difference with first non-orthologous sequence - C.variabilis:219 P.jiroveci:219

E1Z823              	100.00%		L0PE58              	100.00%
Bootstrap support for E1Z823 as seed ortholog is 100%.
Bootstrap support for L0PE58 as seed ortholog is 100%.

Group of orthologs #438. Best score 219 bits
Score difference with first non-orthologous sequence - C.variabilis:219 P.jiroveci:219

E1ZF48              	100.00%		L0PDX6              	100.00%
Bootstrap support for E1ZF48 as seed ortholog is 100%.
Bootstrap support for L0PDX6 as seed ortholog is 100%.

Group of orthologs #439. Best score 218 bits
Score difference with first non-orthologous sequence - C.variabilis:61 P.jiroveci:218

E1Z7Q4              	100.00%		L0PEE3              	100.00%
E1Z630              	12.46%		
Bootstrap support for E1Z7Q4 as seed ortholog is 89%.
Bootstrap support for L0PEE3 as seed ortholog is 100%.

Group of orthologs #440. Best score 218 bits
Score difference with first non-orthologous sequence - C.variabilis:111 P.jiroveci:136

E1ZTE2              	100.00%		L0PHW8              	100.00%
E1ZE10              	13.94%		
Bootstrap support for E1ZTE2 as seed ortholog is 100%.
Bootstrap support for L0PHW8 as seed ortholog is 100%.

Group of orthologs #441. Best score 218 bits
Score difference with first non-orthologous sequence - C.variabilis:65 P.jiroveci:218

E1Z302              	100.00%		L0PBE8              	100.00%
Bootstrap support for E1Z302 as seed ortholog is 97%.
Bootstrap support for L0PBE8 as seed ortholog is 100%.

Group of orthologs #442. Best score 218 bits
Score difference with first non-orthologous sequence - C.variabilis:218 P.jiroveci:52

E1Z9I7              	100.00%		L0PAQ7              	100.00%
Bootstrap support for E1Z9I7 as seed ortholog is 100%.
Bootstrap support for L0PAQ7 as seed ortholog is 97%.

Group of orthologs #443. Best score 218 bits
Score difference with first non-orthologous sequence - C.variabilis:129 P.jiroveci:162

E1Z681              	100.00%		L0PFE3              	100.00%
Bootstrap support for E1Z681 as seed ortholog is 99%.
Bootstrap support for L0PFE3 as seed ortholog is 99%.

Group of orthologs #444. Best score 218 bits
Score difference with first non-orthologous sequence - C.variabilis:218 P.jiroveci:218

E1ZL18              	100.00%		L0P8B2              	100.00%
Bootstrap support for E1ZL18 as seed ortholog is 100%.
Bootstrap support for L0P8B2 as seed ortholog is 100%.

Group of orthologs #445. Best score 218 bits
Score difference with first non-orthologous sequence - C.variabilis:218 P.jiroveci:218

E1ZN36              	100.00%		L0PFU0              	100.00%
Bootstrap support for E1ZN36 as seed ortholog is 100%.
Bootstrap support for L0PFU0 as seed ortholog is 100%.

Group of orthologs #446. Best score 218 bits
Score difference with first non-orthologous sequence - C.variabilis:218 P.jiroveci:218

E1ZSF4              	100.00%		L0PBE0              	100.00%
Bootstrap support for E1ZSF4 as seed ortholog is 100%.
Bootstrap support for L0PBE0 as seed ortholog is 100%.

Group of orthologs #447. Best score 217 bits
Score difference with first non-orthologous sequence - C.variabilis:217 P.jiroveci:217

E1Z6Q0              	100.00%		L0PGV2              	100.00%
                    	       		L0PG40              	63.16%
Bootstrap support for E1Z6Q0 as seed ortholog is 100%.
Bootstrap support for L0PGV2 as seed ortholog is 100%.

Group of orthologs #448. Best score 217 bits
Score difference with first non-orthologous sequence - C.variabilis:104 P.jiroveci:42

E1ZP92              	100.00%		L0PHH9              	100.00%
Bootstrap support for E1ZP92 as seed ortholog is 99%.
Bootstrap support for L0PHH9 as seed ortholog is 96%.

Group of orthologs #449. Best score 216 bits
Score difference with first non-orthologous sequence - C.variabilis:216 P.jiroveci:216

E1Z5P6              	100.00%		L0P9W3              	100.00%
Bootstrap support for E1Z5P6 as seed ortholog is 100%.
Bootstrap support for L0P9W3 as seed ortholog is 100%.

Group of orthologs #450. Best score 216 bits
Score difference with first non-orthologous sequence - C.variabilis:216 P.jiroveci:216

E1ZB13              	100.00%		L0PAE8              	100.00%
Bootstrap support for E1ZB13 as seed ortholog is 100%.
Bootstrap support for L0PAE8 as seed ortholog is 100%.

Group of orthologs #451. Best score 216 bits
Score difference with first non-orthologous sequence - C.variabilis:216 P.jiroveci:216

E1ZHR8              	100.00%		L0PBN0              	100.00%
Bootstrap support for E1ZHR8 as seed ortholog is 100%.
Bootstrap support for L0PBN0 as seed ortholog is 100%.

Group of orthologs #452. Best score 215 bits
Score difference with first non-orthologous sequence - C.variabilis:215 P.jiroveci:215

E1Z6N4              	100.00%		L0PE61              	100.00%
E1Z349              	37.53%		
E1ZRS4              	28.85%		
Bootstrap support for E1Z6N4 as seed ortholog is 100%.
Bootstrap support for L0PE61 as seed ortholog is 100%.

Group of orthologs #453. Best score 214 bits
Score difference with first non-orthologous sequence - C.variabilis:214 P.jiroveci:86

E1ZPW4              	100.00%		L0PEG1              	100.00%
Bootstrap support for E1ZPW4 as seed ortholog is 100%.
Bootstrap support for L0PEG1 as seed ortholog is 97%.

Group of orthologs #454. Best score 214 bits
Score difference with first non-orthologous sequence - C.variabilis:82 P.jiroveci:81

E1ZQY5              	100.00%		L0PG51              	100.00%
Bootstrap support for E1ZQY5 as seed ortholog is 99%.
Bootstrap support for L0PG51 as seed ortholog is 96%.

Group of orthologs #455. Best score 213 bits
Score difference with first non-orthologous sequence - C.variabilis:213 P.jiroveci:213

E1Z5J4              	100.00%		L0PBS5              	100.00%
Bootstrap support for E1Z5J4 as seed ortholog is 100%.
Bootstrap support for L0PBS5 as seed ortholog is 100%.

Group of orthologs #456. Best score 213 bits
Score difference with first non-orthologous sequence - C.variabilis:213 P.jiroveci:213

E1Z505              	100.00%		L0PEJ1              	100.00%
Bootstrap support for E1Z505 as seed ortholog is 100%.
Bootstrap support for L0PEJ1 as seed ortholog is 100%.

Group of orthologs #457. Best score 212 bits
Score difference with first non-orthologous sequence - C.variabilis:212 P.jiroveci:212

E1ZAF6              	100.00%		L0P9R7              	100.00%
Bootstrap support for E1ZAF6 as seed ortholog is 100%.
Bootstrap support for L0P9R7 as seed ortholog is 100%.

Group of orthologs #458. Best score 212 bits
Score difference with first non-orthologous sequence - C.variabilis:212 P.jiroveci:170

E1ZFQ3              	100.00%		L0PBH6              	100.00%
Bootstrap support for E1ZFQ3 as seed ortholog is 100%.
Bootstrap support for L0PBH6 as seed ortholog is 99%.

Group of orthologs #459. Best score 212 bits
Score difference with first non-orthologous sequence - C.variabilis:212 P.jiroveci:212

E1ZFC7              	100.00%		L0PG10              	100.00%
Bootstrap support for E1ZFC7 as seed ortholog is 100%.
Bootstrap support for L0PG10 as seed ortholog is 100%.

Group of orthologs #460. Best score 212 bits
Score difference with first non-orthologous sequence - C.variabilis:212 P.jiroveci:212

E1ZKN0              	100.00%		L0PCV5              	100.00%
Bootstrap support for E1ZKN0 as seed ortholog is 100%.
Bootstrap support for L0PCV5 as seed ortholog is 100%.

Group of orthologs #461. Best score 210 bits
Score difference with first non-orthologous sequence - C.variabilis:210 P.jiroveci:210

E1Z2S0              	100.00%		L0P9B6              	100.00%
Bootstrap support for E1Z2S0 as seed ortholog is 100%.
Bootstrap support for L0P9B6 as seed ortholog is 100%.

Group of orthologs #462. Best score 210 bits
Score difference with first non-orthologous sequence - C.variabilis:210 P.jiroveci:210

E1Z501              	100.00%		L0PD38              	100.00%
Bootstrap support for E1Z501 as seed ortholog is 100%.
Bootstrap support for L0PD38 as seed ortholog is 100%.

Group of orthologs #463. Best score 210 bits
Score difference with first non-orthologous sequence - C.variabilis:210 P.jiroveci:210

E1Z841              	100.00%		L0PG68              	100.00%
Bootstrap support for E1Z841 as seed ortholog is 100%.
Bootstrap support for L0PG68 as seed ortholog is 100%.

Group of orthologs #464. Best score 210 bits
Score difference with first non-orthologous sequence - C.variabilis:80 P.jiroveci:210

E1ZGM1              	100.00%		L0PEZ4              	100.00%
Bootstrap support for E1ZGM1 as seed ortholog is 99%.
Bootstrap support for L0PEZ4 as seed ortholog is 100%.

Group of orthologs #465. Best score 210 bits
Score difference with first non-orthologous sequence - C.variabilis:166 P.jiroveci:91

E1ZPW9              	100.00%		L0PAM8              	100.00%
Bootstrap support for E1ZPW9 as seed ortholog is 100%.
Bootstrap support for L0PAM8 as seed ortholog is 98%.

Group of orthologs #466. Best score 210 bits
Score difference with first non-orthologous sequence - C.variabilis:210 P.jiroveci:210

E1ZPP8              	100.00%		L0PB23              	100.00%
Bootstrap support for E1ZPP8 as seed ortholog is 100%.
Bootstrap support for L0PB23 as seed ortholog is 100%.

Group of orthologs #467. Best score 210 bits
Score difference with first non-orthologous sequence - C.variabilis:210 P.jiroveci:210

E1ZMP9              	100.00%		L0PGN8              	100.00%
Bootstrap support for E1ZMP9 as seed ortholog is 100%.
Bootstrap support for L0PGN8 as seed ortholog is 100%.

Group of orthologs #468. Best score 209 bits
Score difference with first non-orthologous sequence - C.variabilis:209 P.jiroveci:209

E1Z939              	100.00%		L0PCX5              	100.00%
Bootstrap support for E1Z939 as seed ortholog is 100%.
Bootstrap support for L0PCX5 as seed ortholog is 100%.

Group of orthologs #469. Best score 209 bits
Score difference with first non-orthologous sequence - C.variabilis:209 P.jiroveci:209

E1ZQD1              	100.00%		L0P8F0              	100.00%
Bootstrap support for E1ZQD1 as seed ortholog is 100%.
Bootstrap support for L0P8F0 as seed ortholog is 100%.

Group of orthologs #470. Best score 209 bits
Score difference with first non-orthologous sequence - C.variabilis:209 P.jiroveci:209

E1ZIW9              	100.00%		L0PF92              	100.00%
Bootstrap support for E1ZIW9 as seed ortholog is 100%.
Bootstrap support for L0PF92 as seed ortholog is 100%.

Group of orthologs #471. Best score 208 bits
Score difference with first non-orthologous sequence - C.variabilis:208 P.jiroveci:208

E1ZC71              	100.00%		L0PDJ2              	100.00%
Bootstrap support for E1ZC71 as seed ortholog is 100%.
Bootstrap support for L0PDJ2 as seed ortholog is 100%.

Group of orthologs #472. Best score 208 bits
Score difference with first non-orthologous sequence - C.variabilis:208 P.jiroveci:208

E1ZGX3              	100.00%		L0PCU5              	100.00%
Bootstrap support for E1ZGX3 as seed ortholog is 100%.
Bootstrap support for L0PCU5 as seed ortholog is 100%.

Group of orthologs #473. Best score 208 bits
Score difference with first non-orthologous sequence - C.variabilis:208 P.jiroveci:208

E1ZRE9              	100.00%		L0PG93              	100.00%
Bootstrap support for E1ZRE9 as seed ortholog is 100%.
Bootstrap support for L0PG93 as seed ortholog is 100%.

Group of orthologs #474. Best score 207 bits
Score difference with first non-orthologous sequence - C.variabilis:207 P.jiroveci:131

E1Z9U8              	100.00%		L0P9G1              	100.00%
Bootstrap support for E1Z9U8 as seed ortholog is 100%.
Bootstrap support for L0P9G1 as seed ortholog is 100%.

Group of orthologs #475. Best score 207 bits
Score difference with first non-orthologous sequence - C.variabilis:207 P.jiroveci:207

E1ZPH6              	100.00%		L0PC53              	100.00%
Bootstrap support for E1ZPH6 as seed ortholog is 100%.
Bootstrap support for L0PC53 as seed ortholog is 100%.

Group of orthologs #476. Best score 207 bits
Score difference with first non-orthologous sequence - C.variabilis:207 P.jiroveci:207

E1ZQN8              	100.00%		L0PBU4              	100.00%
Bootstrap support for E1ZQN8 as seed ortholog is 100%.
Bootstrap support for L0PBU4 as seed ortholog is 100%.

Group of orthologs #477. Best score 206 bits
Score difference with first non-orthologous sequence - C.variabilis:142 P.jiroveci:206

E1ZDX5              	100.00%		L0PDZ2              	100.00%
Bootstrap support for E1ZDX5 as seed ortholog is 99%.
Bootstrap support for L0PDZ2 as seed ortholog is 100%.

Group of orthologs #478. Best score 206 bits
Score difference with first non-orthologous sequence - C.variabilis:206 P.jiroveci:206

E1ZT44              	100.00%		L0PE77              	100.00%
Bootstrap support for E1ZT44 as seed ortholog is 100%.
Bootstrap support for L0PE77 as seed ortholog is 100%.

Group of orthologs #479. Best score 205 bits
Score difference with first non-orthologous sequence - C.variabilis:33 P.jiroveci:205

E1ZCH0              	100.00%		L0PDB8              	100.00%
Bootstrap support for E1ZCH0 as seed ortholog is 83%.
Bootstrap support for L0PDB8 as seed ortholog is 100%.

Group of orthologs #480. Best score 205 bits
Score difference with first non-orthologous sequence - C.variabilis:205 P.jiroveci:205

E1ZGW5              	100.00%		L0P9G7              	100.00%
Bootstrap support for E1ZGW5 as seed ortholog is 100%.
Bootstrap support for L0P9G7 as seed ortholog is 100%.

Group of orthologs #481. Best score 205 bits
Score difference with first non-orthologous sequence - C.variabilis:205 P.jiroveci:32

E1ZNJ6              	100.00%		L0PBB0              	100.00%
Bootstrap support for E1ZNJ6 as seed ortholog is 100%.
Bootstrap support for L0PBB0 as seed ortholog is 74%.
Alternative seed ortholog is L0PCS3 (32 bits away from this cluster)

Group of orthologs #482. Best score 204 bits
Score difference with first non-orthologous sequence - C.variabilis:204 P.jiroveci:204

E1ZEB6              	100.00%		L0PET7              	100.00%
Bootstrap support for E1ZEB6 as seed ortholog is 100%.
Bootstrap support for L0PET7 as seed ortholog is 100%.

Group of orthologs #483. Best score 204 bits
Score difference with first non-orthologous sequence - C.variabilis:204 P.jiroveci:204

E1ZGB4              	100.00%		L0PD44              	100.00%
Bootstrap support for E1ZGB4 as seed ortholog is 100%.
Bootstrap support for L0PD44 as seed ortholog is 100%.

Group of orthologs #484. Best score 204 bits
Score difference with first non-orthologous sequence - C.variabilis:204 P.jiroveci:204

E1ZMX2              	100.00%		L0PCB3              	100.00%
Bootstrap support for E1ZMX2 as seed ortholog is 100%.
Bootstrap support for L0PCB3 as seed ortholog is 100%.

Group of orthologs #485. Best score 203 bits
Score difference with first non-orthologous sequence - C.variabilis:203 P.jiroveci:203

E1ZKP2              	100.00%		L0PAL9              	100.00%
                    	       		L0PBY7              	45.03%
Bootstrap support for E1ZKP2 as seed ortholog is 100%.
Bootstrap support for L0PAL9 as seed ortholog is 100%.

Group of orthologs #486. Best score 203 bits
Score difference with first non-orthologous sequence - C.variabilis:203 P.jiroveci:203

E1Z901              	100.00%		L0PB66              	100.00%
Bootstrap support for E1Z901 as seed ortholog is 100%.
Bootstrap support for L0PB66 as seed ortholog is 100%.

Group of orthologs #487. Best score 203 bits
Score difference with first non-orthologous sequence - C.variabilis:89 P.jiroveci:123

E1ZGL1              	100.00%		L0PBS9              	100.00%
Bootstrap support for E1ZGL1 as seed ortholog is 97%.
Bootstrap support for L0PBS9 as seed ortholog is 99%.

Group of orthologs #488. Best score 202 bits
Score difference with first non-orthologous sequence - C.variabilis:202 P.jiroveci:202

E1ZFE9              	100.00%		L0PDJ6              	100.00%
Bootstrap support for E1ZFE9 as seed ortholog is 100%.
Bootstrap support for L0PDJ6 as seed ortholog is 100%.

Group of orthologs #489. Best score 202 bits
Score difference with first non-orthologous sequence - C.variabilis:202 P.jiroveci:45

E1ZSL8              	100.00%		L0PDD3              	100.00%
Bootstrap support for E1ZSL8 as seed ortholog is 100%.
Bootstrap support for L0PDD3 as seed ortholog is 92%.

Group of orthologs #490. Best score 201 bits
Score difference with first non-orthologous sequence - C.variabilis:53 P.jiroveci:100

E1ZEL2              	100.00%		L0PAP9              	100.00%
Bootstrap support for E1ZEL2 as seed ortholog is 99%.
Bootstrap support for L0PAP9 as seed ortholog is 100%.

Group of orthologs #491. Best score 201 bits
Score difference with first non-orthologous sequence - C.variabilis:201 P.jiroveci:201

E1ZEY3              	100.00%		L0PH55              	100.00%
Bootstrap support for E1ZEY3 as seed ortholog is 100%.
Bootstrap support for L0PH55 as seed ortholog is 100%.

Group of orthologs #492. Best score 200 bits
Score difference with first non-orthologous sequence - C.variabilis:88 P.jiroveci:200

E1ZGY3              	100.00%		L0PB43              	100.00%
                    	       		L0PB90              	21.84%
                    	       		L0PAP2              	5.41%
Bootstrap support for E1ZGY3 as seed ortholog is 84%.
Bootstrap support for L0PB43 as seed ortholog is 100%.

Group of orthologs #493. Best score 200 bits
Score difference with first non-orthologous sequence - C.variabilis:14 P.jiroveci:89

E1Z204              	100.00%		L0P9F9              	100.00%
Bootstrap support for E1Z204 as seed ortholog is 71%.
Alternative seed ortholog is E1ZC89 (14 bits away from this cluster)
Bootstrap support for L0P9F9 as seed ortholog is 99%.

Group of orthologs #494. Best score 200 bits
Score difference with first non-orthologous sequence - C.variabilis:107 P.jiroveci:84

E1ZSB3              	100.00%		L0PFN2              	100.00%
Bootstrap support for E1ZSB3 as seed ortholog is 100%.
Bootstrap support for L0PFN2 as seed ortholog is 100%.

Group of orthologs #495. Best score 198 bits
Score difference with first non-orthologous sequence - C.variabilis:198 P.jiroveci:198

E1ZM71              	100.00%		L0P858              	100.00%
                    	       		L0PDX5              	69.58%
Bootstrap support for E1ZM71 as seed ortholog is 100%.
Bootstrap support for L0P858 as seed ortholog is 100%.

Group of orthologs #496. Best score 198 bits
Score difference with first non-orthologous sequence - C.variabilis:198 P.jiroveci:198

E1Z7F2              	100.00%		L0PEY5              	100.00%
Bootstrap support for E1Z7F2 as seed ortholog is 100%.
Bootstrap support for L0PEY5 as seed ortholog is 100%.

Group of orthologs #497. Best score 198 bits
Score difference with first non-orthologous sequence - C.variabilis:198 P.jiroveci:198

E1Z811              	100.00%		L0PGY0              	100.00%
Bootstrap support for E1Z811 as seed ortholog is 100%.
Bootstrap support for L0PGY0 as seed ortholog is 100%.

Group of orthologs #498. Best score 198 bits
Score difference with first non-orthologous sequence - C.variabilis:153 P.jiroveci:198

E1ZFB4              	100.00%		L0PD40              	100.00%
Bootstrap support for E1ZFB4 as seed ortholog is 99%.
Bootstrap support for L0PD40 as seed ortholog is 100%.

Group of orthologs #499. Best score 198 bits
Score difference with first non-orthologous sequence - C.variabilis:198 P.jiroveci:80

E1ZCR2              	100.00%		L0PGX9              	100.00%
Bootstrap support for E1ZCR2 as seed ortholog is 100%.
Bootstrap support for L0PGX9 as seed ortholog is 97%.

Group of orthologs #500. Best score 198 bits
Score difference with first non-orthologous sequence - C.variabilis:82 P.jiroveci:60

E1ZI02              	100.00%		L0PGT3              	100.00%
Bootstrap support for E1ZI02 as seed ortholog is 99%.
Bootstrap support for L0PGT3 as seed ortholog is 99%.

Group of orthologs #501. Best score 198 bits
Score difference with first non-orthologous sequence - C.variabilis:120 P.jiroveci:147

E1ZNZ2              	100.00%		L0PAW4              	100.00%
Bootstrap support for E1ZNZ2 as seed ortholog is 99%.
Bootstrap support for L0PAW4 as seed ortholog is 100%.

Group of orthologs #502. Best score 196 bits
Score difference with first non-orthologous sequence - C.variabilis:196 P.jiroveci:196

E1ZLI8              	100.00%		L0P9K2              	100.00%
Bootstrap support for E1ZLI8 as seed ortholog is 100%.
Bootstrap support for L0P9K2 as seed ortholog is 100%.

Group of orthologs #503. Best score 196 bits
Score difference with first non-orthologous sequence - C.variabilis:196 P.jiroveci:196

E1ZFM6              	100.00%		L0PFW4              	100.00%
Bootstrap support for E1ZFM6 as seed ortholog is 100%.
Bootstrap support for L0PFW4 as seed ortholog is 100%.

Group of orthologs #504. Best score 195 bits
Score difference with first non-orthologous sequence - C.variabilis:136 P.jiroveci:195

E1Z828              	100.00%		L0PB84              	100.00%
Bootstrap support for E1Z828 as seed ortholog is 100%.
Bootstrap support for L0PB84 as seed ortholog is 100%.

Group of orthologs #505. Best score 195 bits
Score difference with first non-orthologous sequence - C.variabilis:195 P.jiroveci:195

E1Z702              	100.00%		L0PCI8              	100.00%
Bootstrap support for E1Z702 as seed ortholog is 100%.
Bootstrap support for L0PCI8 as seed ortholog is 100%.

Group of orthologs #506. Best score 195 bits
Score difference with first non-orthologous sequence - C.variabilis:195 P.jiroveci:195

E1ZSB0              	100.00%		L0PC18              	100.00%
Bootstrap support for E1ZSB0 as seed ortholog is 100%.
Bootstrap support for L0PC18 as seed ortholog is 100%.

Group of orthologs #507. Best score 194 bits
Score difference with first non-orthologous sequence - C.variabilis:194 P.jiroveci:194

E1ZTH0              	100.00%		L0PFP1              	100.00%
                    	       		L0PC71              	74.42%
Bootstrap support for E1ZTH0 as seed ortholog is 100%.
Bootstrap support for L0PFP1 as seed ortholog is 100%.

Group of orthologs #508. Best score 194 bits
Score difference with first non-orthologous sequence - C.variabilis:194 P.jiroveci:194

E1ZFC4              	100.00%		L0PFZ1              	100.00%
Bootstrap support for E1ZFC4 as seed ortholog is 100%.
Bootstrap support for L0PFZ1 as seed ortholog is 100%.

Group of orthologs #509. Best score 194 bits
Score difference with first non-orthologous sequence - C.variabilis:97 P.jiroveci:194

E1ZL88              	100.00%		L0PGW6              	100.00%
Bootstrap support for E1ZL88 as seed ortholog is 99%.
Bootstrap support for L0PGW6 as seed ortholog is 100%.

Group of orthologs #510. Best score 193 bits
Score difference with first non-orthologous sequence - C.variabilis:193 P.jiroveci:193

E1ZD07              	100.00%		L0PBZ6              	100.00%
Bootstrap support for E1ZD07 as seed ortholog is 100%.
Bootstrap support for L0PBZ6 as seed ortholog is 100%.

Group of orthologs #511. Best score 193 bits
Score difference with first non-orthologous sequence - C.variabilis:193 P.jiroveci:193

E1Z9C4              	100.00%		L0PH80              	100.00%
Bootstrap support for E1Z9C4 as seed ortholog is 100%.
Bootstrap support for L0PH80 as seed ortholog is 100%.

Group of orthologs #512. Best score 193 bits
Score difference with first non-orthologous sequence - C.variabilis:193 P.jiroveci:193

E1ZMJ7              	100.00%		L0PI19              	100.00%
Bootstrap support for E1ZMJ7 as seed ortholog is 100%.
Bootstrap support for L0PI19 as seed ortholog is 100%.

Group of orthologs #513. Best score 191 bits
Score difference with first non-orthologous sequence - C.variabilis:99 P.jiroveci:191

E1ZLG0              	100.00%		L0PGD7              	100.00%
                    	       		L0PGQ0              	68.44%
Bootstrap support for E1ZLG0 as seed ortholog is 99%.
Bootstrap support for L0PGD7 as seed ortholog is 100%.

Group of orthologs #514. Best score 191 bits
Score difference with first non-orthologous sequence - C.variabilis:191 P.jiroveci:191

E1ZLN0              	100.00%		L0PGD6              	100.00%
Bootstrap support for E1ZLN0 as seed ortholog is 100%.
Bootstrap support for L0PGD6 as seed ortholog is 100%.

Group of orthologs #515. Best score 190 bits
Score difference with first non-orthologous sequence - C.variabilis:28 P.jiroveci:190

E1Z4P1              	100.00%		L0PC99              	100.00%
Bootstrap support for E1Z4P1 as seed ortholog is 78%.
Bootstrap support for L0PC99 as seed ortholog is 100%.

Group of orthologs #516. Best score 190 bits
Score difference with first non-orthologous sequence - C.variabilis:190 P.jiroveci:190

E1ZGD4              	100.00%		L0PAR2              	100.00%
Bootstrap support for E1ZGD4 as seed ortholog is 100%.
Bootstrap support for L0PAR2 as seed ortholog is 100%.

Group of orthologs #517. Best score 190 bits
Score difference with first non-orthologous sequence - C.variabilis:190 P.jiroveci:190

E1ZIJ8              	100.00%		L0PHL0              	100.00%
Bootstrap support for E1ZIJ8 as seed ortholog is 100%.
Bootstrap support for L0PHL0 as seed ortholog is 100%.

Group of orthologs #518. Best score 189 bits
Score difference with first non-orthologous sequence - C.variabilis:189 P.jiroveci:189

E1Z8M4              	100.00%		L0PEN7              	100.00%
Bootstrap support for E1Z8M4 as seed ortholog is 100%.
Bootstrap support for L0PEN7 as seed ortholog is 100%.

Group of orthologs #519. Best score 189 bits
Score difference with first non-orthologous sequence - C.variabilis:189 P.jiroveci:189

E1ZTN8              	100.00%		L0PAS1              	100.00%
Bootstrap support for E1ZTN8 as seed ortholog is 100%.
Bootstrap support for L0PAS1 as seed ortholog is 100%.

Group of orthologs #520. Best score 188 bits
Score difference with first non-orthologous sequence - C.variabilis:28 P.jiroveci:188

E1ZA77              	100.00%		L0PA92              	100.00%
                    	       		L0P8X8              	43.56%
Bootstrap support for E1ZA77 as seed ortholog is 70%.
Alternative seed ortholog is E1ZKV8 (28 bits away from this cluster)
Bootstrap support for L0PA92 as seed ortholog is 100%.

Group of orthologs #521. Best score 188 bits
Score difference with first non-orthologous sequence - C.variabilis:188 P.jiroveci:55

E1ZIB8              	100.00%		L0P863              	100.00%
Bootstrap support for E1ZIB8 as seed ortholog is 100%.
Bootstrap support for L0P863 as seed ortholog is 93%.

Group of orthologs #522. Best score 187 bits
Score difference with first non-orthologous sequence - C.variabilis:187 P.jiroveci:187

E1Z946              	100.00%		L0P9U1              	100.00%
Bootstrap support for E1Z946 as seed ortholog is 100%.
Bootstrap support for L0P9U1 as seed ortholog is 100%.

Group of orthologs #523. Best score 186 bits
Score difference with first non-orthologous sequence - C.variabilis:57 P.jiroveci:93

E1ZCE3              	100.00%		L0PAY4              	100.00%
E1ZRA5              	77.61%		
E1ZRB7              	77.61%		
E1Z2X3              	37.31%		
E1ZGZ5              	29.85%		
Bootstrap support for E1ZCE3 as seed ortholog is 99%.
Bootstrap support for L0PAY4 as seed ortholog is 100%.

Group of orthologs #524. Best score 186 bits
Score difference with first non-orthologous sequence - C.variabilis:186 P.jiroveci:186

E1Z9P4              	100.00%		L0PCT5              	100.00%
Bootstrap support for E1Z9P4 as seed ortholog is 100%.
Bootstrap support for L0PCT5 as seed ortholog is 100%.

Group of orthologs #525. Best score 186 bits
Score difference with first non-orthologous sequence - C.variabilis:186 P.jiroveci:186

E1Z9N6              	100.00%		L0PG33              	100.00%
Bootstrap support for E1Z9N6 as seed ortholog is 100%.
Bootstrap support for L0PG33 as seed ortholog is 100%.

Group of orthologs #526. Best score 186 bits
Score difference with first non-orthologous sequence - C.variabilis:186 P.jiroveci:186

E1ZGH3              	100.00%		L0P962              	100.00%
Bootstrap support for E1ZGH3 as seed ortholog is 100%.
Bootstrap support for L0P962 as seed ortholog is 100%.

Group of orthologs #527. Best score 186 bits
Score difference with first non-orthologous sequence - C.variabilis:186 P.jiroveci:186

E1ZHJ8              	100.00%		L0P7V8              	100.00%
Bootstrap support for E1ZHJ8 as seed ortholog is 100%.
Bootstrap support for L0P7V8 as seed ortholog is 100%.

Group of orthologs #528. Best score 186 bits
Score difference with first non-orthologous sequence - C.variabilis:63 P.jiroveci:186

E1ZJG6              	100.00%		L0PAA8              	100.00%
Bootstrap support for E1ZJG6 as seed ortholog is 98%.
Bootstrap support for L0PAA8 as seed ortholog is 100%.

Group of orthologs #529. Best score 186 bits
Score difference with first non-orthologous sequence - C.variabilis:186 P.jiroveci:186

E1ZM44              	100.00%		L0PHK5              	100.00%
Bootstrap support for E1ZM44 as seed ortholog is 100%.
Bootstrap support for L0PHK5 as seed ortholog is 100%.

Group of orthologs #530. Best score 185 bits
Score difference with first non-orthologous sequence - C.variabilis:185 P.jiroveci:185

E1ZTW0              	100.00%		L0P9I0              	100.00%
Bootstrap support for E1ZTW0 as seed ortholog is 100%.
Bootstrap support for L0P9I0 as seed ortholog is 100%.

Group of orthologs #531. Best score 184 bits
Score difference with first non-orthologous sequence - C.variabilis:184 P.jiroveci:184

E1Z6D0              	100.00%		L0PBP9              	100.00%
Bootstrap support for E1Z6D0 as seed ortholog is 100%.
Bootstrap support for L0PBP9 as seed ortholog is 100%.

Group of orthologs #532. Best score 184 bits
Score difference with first non-orthologous sequence - C.variabilis:123 P.jiroveci:184

E1ZGQ7              	100.00%		L0PEZ1              	100.00%
Bootstrap support for E1ZGQ7 as seed ortholog is 99%.
Bootstrap support for L0PEZ1 as seed ortholog is 100%.

Group of orthologs #533. Best score 184 bits
Score difference with first non-orthologous sequence - C.variabilis:118 P.jiroveci:184

E1ZLE9              	100.00%		L0PAV2              	100.00%
Bootstrap support for E1ZLE9 as seed ortholog is 99%.
Bootstrap support for L0PAV2 as seed ortholog is 100%.

Group of orthologs #534. Best score 183 bits
Score difference with first non-orthologous sequence - C.variabilis:26 P.jiroveci:183

E1ZKB2              	100.00%		L0PEN4              	100.00%
E1ZKC0              	45.71%		
E1Z3S7              	37.79%		
E1ZF73              	32.03%		
E1Z2J3              	10.21%		
Bootstrap support for E1ZKB2 as seed ortholog is 70%.
Alternative seed ortholog is E1ZKZ3 (26 bits away from this cluster)
Bootstrap support for L0PEN4 as seed ortholog is 100%.

Group of orthologs #535. Best score 183 bits
Score difference with first non-orthologous sequence - C.variabilis:183 P.jiroveci:183

E1ZQ37              	100.00%		L0PB09              	100.00%
Bootstrap support for E1ZQ37 as seed ortholog is 100%.
Bootstrap support for L0PB09 as seed ortholog is 100%.

Group of orthologs #536. Best score 183 bits
Score difference with first non-orthologous sequence - C.variabilis:183 P.jiroveci:183

E1ZQN9              	100.00%		L0PGQ4              	100.00%
Bootstrap support for E1ZQN9 as seed ortholog is 100%.
Bootstrap support for L0PGQ4 as seed ortholog is 100%.

Group of orthologs #537. Best score 182 bits
Score difference with first non-orthologous sequence - C.variabilis:182 P.jiroveci:182

E1Z425              	100.00%		L0PAL5              	100.00%
Bootstrap support for E1Z425 as seed ortholog is 100%.
Bootstrap support for L0PAL5 as seed ortholog is 100%.

Group of orthologs #538. Best score 182 bits
Score difference with first non-orthologous sequence - C.variabilis:182 P.jiroveci:182

E1Z7W5              	100.00%		L0PDH2              	100.00%
Bootstrap support for E1Z7W5 as seed ortholog is 100%.
Bootstrap support for L0PDH2 as seed ortholog is 100%.

Group of orthologs #539. Best score 182 bits
Score difference with first non-orthologous sequence - C.variabilis:182 P.jiroveci:182

E1ZHD9              	100.00%		L0P9T5              	100.00%
Bootstrap support for E1ZHD9 as seed ortholog is 100%.
Bootstrap support for L0P9T5 as seed ortholog is 100%.

Group of orthologs #540. Best score 181 bits
Score difference with first non-orthologous sequence - C.variabilis:50 P.jiroveci:181

E1ZCZ6              	100.00%		L0PC06              	100.00%
E1ZT51              	6.28%		
Bootstrap support for E1ZCZ6 as seed ortholog is 96%.
Bootstrap support for L0PC06 as seed ortholog is 100%.

Group of orthologs #541. Best score 181 bits
Score difference with first non-orthologous sequence - C.variabilis:28 P.jiroveci:50

E1Z7E6              	100.00%		L0P7B1              	100.00%
Bootstrap support for E1Z7E6 as seed ortholog is 91%.
Bootstrap support for L0P7B1 as seed ortholog is 98%.

Group of orthologs #542. Best score 181 bits
Score difference with first non-orthologous sequence - C.variabilis:97 P.jiroveci:95

E1Z8G2              	100.00%		L0PGN9              	100.00%
Bootstrap support for E1Z8G2 as seed ortholog is 99%.
Bootstrap support for L0PGN9 as seed ortholog is 99%.

Group of orthologs #543. Best score 181 bits
Score difference with first non-orthologous sequence - C.variabilis:181 P.jiroveci:129

E1ZQS1              	100.00%		L0PD58              	100.00%
Bootstrap support for E1ZQS1 as seed ortholog is 100%.
Bootstrap support for L0PD58 as seed ortholog is 99%.

Group of orthologs #544. Best score 180 bits
Score difference with first non-orthologous sequence - C.variabilis:180 P.jiroveci:180

E1Z9W5              	100.00%		L0P9Y2              	100.00%
Bootstrap support for E1Z9W5 as seed ortholog is 100%.
Bootstrap support for L0P9Y2 as seed ortholog is 100%.

Group of orthologs #545. Best score 179 bits
Score difference with first non-orthologous sequence - C.variabilis:123 P.jiroveci:179

E1Z8Y2              	100.00%		L0P839              	100.00%
E1ZHG7              	11.15%		
Bootstrap support for E1Z8Y2 as seed ortholog is 100%.
Bootstrap support for L0P839 as seed ortholog is 100%.

Group of orthologs #546. Best score 179 bits
Score difference with first non-orthologous sequence - C.variabilis:112 P.jiroveci:93

E1Z389              	100.00%		L0PAZ8              	100.00%
Bootstrap support for E1Z389 as seed ortholog is 99%.
Bootstrap support for L0PAZ8 as seed ortholog is 99%.

Group of orthologs #547. Best score 179 bits
Score difference with first non-orthologous sequence - C.variabilis:179 P.jiroveci:179

E1ZB51              	100.00%		L0PEC6              	100.00%
Bootstrap support for E1ZB51 as seed ortholog is 100%.
Bootstrap support for L0PEC6 as seed ortholog is 100%.

Group of orthologs #548. Best score 179 bits
Score difference with first non-orthologous sequence - C.variabilis:136 P.jiroveci:179

E1ZPN7              	100.00%		L0P919              	100.00%
Bootstrap support for E1ZPN7 as seed ortholog is 100%.
Bootstrap support for L0P919 as seed ortholog is 100%.

Group of orthologs #549. Best score 178 bits
Score difference with first non-orthologous sequence - C.variabilis:178 P.jiroveci:178

E1Z9S8              	100.00%		L0PD65              	100.00%
Bootstrap support for E1Z9S8 as seed ortholog is 100%.
Bootstrap support for L0PD65 as seed ortholog is 100%.

Group of orthologs #550. Best score 178 bits
Score difference with first non-orthologous sequence - C.variabilis:178 P.jiroveci:178

E1ZEM2              	100.00%		L0PA55              	100.00%
Bootstrap support for E1ZEM2 as seed ortholog is 100%.
Bootstrap support for L0PA55 as seed ortholog is 100%.

Group of orthologs #551. Best score 178 bits
Score difference with first non-orthologous sequence - C.variabilis:178 P.jiroveci:178

E1ZHZ3              	100.00%		L0PG39              	100.00%
Bootstrap support for E1ZHZ3 as seed ortholog is 100%.
Bootstrap support for L0PG39 as seed ortholog is 100%.

Group of orthologs #552. Best score 177 bits
Score difference with first non-orthologous sequence - C.variabilis:59 P.jiroveci:83

E1ZIV4              	100.00%		L0PAS2              	100.00%
Bootstrap support for E1ZIV4 as seed ortholog is 99%.
Bootstrap support for L0PAS2 as seed ortholog is 99%.

Group of orthologs #553. Best score 176 bits
Score difference with first non-orthologous sequence - C.variabilis:176 P.jiroveci:176

E1Z6H7              	100.00%		L0P8Y0              	100.00%
Bootstrap support for E1Z6H7 as seed ortholog is 100%.
Bootstrap support for L0P8Y0 as seed ortholog is 100%.

Group of orthologs #554. Best score 176 bits
Score difference with first non-orthologous sequence - C.variabilis:52 P.jiroveci:110

E1Z376              	100.00%		L0PDG6              	100.00%
Bootstrap support for E1Z376 as seed ortholog is 95%.
Bootstrap support for L0PDG6 as seed ortholog is 99%.

Group of orthologs #555. Best score 176 bits
Score difference with first non-orthologous sequence - C.variabilis:59 P.jiroveci:176

E1ZE31              	100.00%		L0PFS1              	100.00%
Bootstrap support for E1ZE31 as seed ortholog is 98%.
Bootstrap support for L0PFS1 as seed ortholog is 100%.

Group of orthologs #556. Best score 175 bits
Score difference with first non-orthologous sequence - C.variabilis:39 P.jiroveci:24

E1ZL71              	100.00%		L0PCN5              	100.00%
E1ZL72              	33.54%		L0P7B6              	92.92%
E1ZT38              	29.06%		
E1ZJY6              	27.98%		
E1ZT37              	27.20%		
E1ZKT6              	24.57%		
E1ZT36              	21.79%		
Bootstrap support for E1ZL71 as seed ortholog is 82%.
Bootstrap support for L0PCN5 as seed ortholog is 68%.
Alternative seed ortholog is L0PCJ7 (24 bits away from this cluster)

Group of orthologs #557. Best score 175 bits
Score difference with first non-orthologous sequence - C.variabilis:175 P.jiroveci:175

E1ZNY8              	100.00%		L0PBN7              	100.00%
Bootstrap support for E1ZNY8 as seed ortholog is 100%.
Bootstrap support for L0PBN7 as seed ortholog is 100%.

Group of orthologs #558. Best score 174 bits
Score difference with first non-orthologous sequence - C.variabilis:54 P.jiroveci:174

E1ZBH2              	100.00%		L0PFQ4              	100.00%
Bootstrap support for E1ZBH2 as seed ortholog is 99%.
Bootstrap support for L0PFQ4 as seed ortholog is 100%.

Group of orthologs #559. Best score 174 bits
Score difference with first non-orthologous sequence - C.variabilis:174 P.jiroveci:174

E1ZKQ4              	100.00%		L0P701              	100.00%
Bootstrap support for E1ZKQ4 as seed ortholog is 100%.
Bootstrap support for L0P701 as seed ortholog is 100%.

Group of orthologs #560. Best score 174 bits
Score difference with first non-orthologous sequence - C.variabilis:174 P.jiroveci:174

E1ZQK6              	100.00%		L0PA63              	100.00%
Bootstrap support for E1ZQK6 as seed ortholog is 100%.
Bootstrap support for L0PA63 as seed ortholog is 100%.

Group of orthologs #561. Best score 173 bits
Score difference with first non-orthologous sequence - C.variabilis:173 P.jiroveci:173

E1Z3V8              	100.00%		L0PFL0              	100.00%
Bootstrap support for E1Z3V8 as seed ortholog is 100%.
Bootstrap support for L0PFL0 as seed ortholog is 100%.

Group of orthologs #562. Best score 173 bits
Score difference with first non-orthologous sequence - C.variabilis:173 P.jiroveci:173

E1ZSA6              	100.00%		L0P8D5              	100.00%
Bootstrap support for E1ZSA6 as seed ortholog is 100%.
Bootstrap support for L0P8D5 as seed ortholog is 100%.

Group of orthologs #563. Best score 173 bits
Score difference with first non-orthologous sequence - C.variabilis:68 P.jiroveci:65

E1ZL55              	100.00%		L0PGL7              	100.00%
Bootstrap support for E1ZL55 as seed ortholog is 98%.
Bootstrap support for L0PGL7 as seed ortholog is 98%.

Group of orthologs #564. Best score 172 bits
Score difference with first non-orthologous sequence - C.variabilis:172 P.jiroveci:172

E1ZMG6              	100.00%		L0PFH7              	100.00%
Bootstrap support for E1ZMG6 as seed ortholog is 100%.
Bootstrap support for L0PFH7 as seed ortholog is 100%.

Group of orthologs #565. Best score 171 bits
Score difference with first non-orthologous sequence - C.variabilis:171 P.jiroveci:171

E1ZGX4              	100.00%		L0PHG9              	100.00%
E1ZM97              	33.65%		
E1Z6V8              	12.10%		
Bootstrap support for E1ZGX4 as seed ortholog is 100%.
Bootstrap support for L0PHG9 as seed ortholog is 100%.

Group of orthologs #566. Best score 171 bits
Score difference with first non-orthologous sequence - C.variabilis:171 P.jiroveci:171

E1Z2F6              	100.00%		L0PB81              	100.00%
Bootstrap support for E1Z2F6 as seed ortholog is 100%.
Bootstrap support for L0PB81 as seed ortholog is 100%.

Group of orthologs #567. Best score 171 bits
Score difference with first non-orthologous sequence - C.variabilis:171 P.jiroveci:171

E1Z8Z0              	100.00%		L0PE02              	100.00%
Bootstrap support for E1Z8Z0 as seed ortholog is 100%.
Bootstrap support for L0PE02 as seed ortholog is 100%.

Group of orthologs #568. Best score 171 bits
Score difference with first non-orthologous sequence - C.variabilis:171 P.jiroveci:171

E1ZHW5              	100.00%		L0PAP1              	100.00%
Bootstrap support for E1ZHW5 as seed ortholog is 100%.
Bootstrap support for L0PAP1 as seed ortholog is 100%.

Group of orthologs #569. Best score 170 bits
Score difference with first non-orthologous sequence - C.variabilis:124 P.jiroveci:104

E1Z5V8              	100.00%		L0P895              	100.00%
Bootstrap support for E1Z5V8 as seed ortholog is 99%.
Bootstrap support for L0P895 as seed ortholog is 99%.

Group of orthologs #570. Best score 170 bits
Score difference with first non-orthologous sequence - C.variabilis:170 P.jiroveci:170

E1ZE85              	100.00%		L0PAC1              	100.00%
Bootstrap support for E1ZE85 as seed ortholog is 100%.
Bootstrap support for L0PAC1 as seed ortholog is 100%.

Group of orthologs #571. Best score 170 bits
Score difference with first non-orthologous sequence - C.variabilis:102 P.jiroveci:170

E1ZKR3              	100.00%		L0PAZ6              	100.00%
Bootstrap support for E1ZKR3 as seed ortholog is 95%.
Bootstrap support for L0PAZ6 as seed ortholog is 100%.

Group of orthologs #572. Best score 170 bits
Score difference with first non-orthologous sequence - C.variabilis:170 P.jiroveci:170

E1ZTI2              	100.00%		L0PEX0              	100.00%
Bootstrap support for E1ZTI2 as seed ortholog is 100%.
Bootstrap support for L0PEX0 as seed ortholog is 100%.

Group of orthologs #573. Best score 169 bits
Score difference with first non-orthologous sequence - C.variabilis:169 P.jiroveci:169

E1Z1W2              	100.00%		L0PEI6              	100.00%
Bootstrap support for E1Z1W2 as seed ortholog is 100%.
Bootstrap support for L0PEI6 as seed ortholog is 100%.

Group of orthologs #574. Best score 169 bits
Score difference with first non-orthologous sequence - C.variabilis:103 P.jiroveci:169

E1Z564              	100.00%		L0PDE4              	100.00%
Bootstrap support for E1Z564 as seed ortholog is 99%.
Bootstrap support for L0PDE4 as seed ortholog is 100%.

Group of orthologs #575. Best score 169 bits
Score difference with first non-orthologous sequence - C.variabilis:169 P.jiroveci:169

E1Z655              	100.00%		L0PDX4              	100.00%
Bootstrap support for E1Z655 as seed ortholog is 100%.
Bootstrap support for L0PDX4 as seed ortholog is 100%.

Group of orthologs #576. Best score 169 bits
Score difference with first non-orthologous sequence - C.variabilis:169 P.jiroveci:169

E1Z7V5              	100.00%		L0PDW5              	100.00%
Bootstrap support for E1Z7V5 as seed ortholog is 100%.
Bootstrap support for L0PDW5 as seed ortholog is 100%.

Group of orthologs #577. Best score 169 bits
Score difference with first non-orthologous sequence - C.variabilis:169 P.jiroveci:169

E1ZM16              	100.00%		L0PAZ5              	100.00%
Bootstrap support for E1ZM16 as seed ortholog is 100%.
Bootstrap support for L0PAZ5 as seed ortholog is 100%.

Group of orthologs #578. Best score 168 bits
Score difference with first non-orthologous sequence - C.variabilis:168 P.jiroveci:168

E1ZM20              	100.00%		L0PCW8              	100.00%
Bootstrap support for E1ZM20 as seed ortholog is 100%.
Bootstrap support for L0PCW8 as seed ortholog is 100%.

Group of orthologs #579. Best score 167 bits
Score difference with first non-orthologous sequence - C.variabilis:89 P.jiroveci:106

E1ZB17              	100.00%		L0PD63              	100.00%
Bootstrap support for E1ZB17 as seed ortholog is 99%.
Bootstrap support for L0PD63 as seed ortholog is 99%.

Group of orthologs #580. Best score 167 bits
Score difference with first non-orthologous sequence - C.variabilis:31 P.jiroveci:104

E1ZE46              	100.00%		L0PB47              	100.00%
Bootstrap support for E1ZE46 as seed ortholog is 77%.
Bootstrap support for L0PB47 as seed ortholog is 99%.

Group of orthologs #581. Best score 167 bits
Score difference with first non-orthologous sequence - C.variabilis:167 P.jiroveci:167

E1ZH81              	100.00%		L0PFI7              	100.00%
Bootstrap support for E1ZH81 as seed ortholog is 100%.
Bootstrap support for L0PFI7 as seed ortholog is 100%.

Group of orthologs #582. Best score 166 bits
Score difference with first non-orthologous sequence - C.variabilis:166 P.jiroveci:166

E1ZD69              	100.00%		L0PAJ6              	100.00%
Bootstrap support for E1ZD69 as seed ortholog is 100%.
Bootstrap support for L0PAJ6 as seed ortholog is 100%.

Group of orthologs #583. Best score 166 bits
Score difference with first non-orthologous sequence - C.variabilis:166 P.jiroveci:166

E1ZIK4              	100.00%		L0PA36              	100.00%
Bootstrap support for E1ZIK4 as seed ortholog is 100%.
Bootstrap support for L0PA36 as seed ortholog is 100%.

Group of orthologs #584. Best score 166 bits
Score difference with first non-orthologous sequence - C.variabilis:166 P.jiroveci:166

E1ZJU0              	100.00%		L0P9M6              	100.00%
Bootstrap support for E1ZJU0 as seed ortholog is 100%.
Bootstrap support for L0P9M6 as seed ortholog is 100%.

Group of orthologs #585. Best score 166 bits
Score difference with first non-orthologous sequence - C.variabilis:166 P.jiroveci:166

E1ZHU7              	100.00%		L0PDP9              	100.00%
Bootstrap support for E1ZHU7 as seed ortholog is 100%.
Bootstrap support for L0PDP9 as seed ortholog is 100%.

Group of orthologs #586. Best score 166 bits
Score difference with first non-orthologous sequence - C.variabilis:166 P.jiroveci:166

E1ZGZ7              	100.00%		L0PF04              	100.00%
Bootstrap support for E1ZGZ7 as seed ortholog is 100%.
Bootstrap support for L0PF04 as seed ortholog is 100%.

Group of orthologs #587. Best score 166 bits
Score difference with first non-orthologous sequence - C.variabilis:166 P.jiroveci:166

E1ZRQ7              	100.00%		L0P9Y7              	100.00%
Bootstrap support for E1ZRQ7 as seed ortholog is 100%.
Bootstrap support for L0P9Y7 as seed ortholog is 100%.

Group of orthologs #588. Best score 166 bits
Score difference with first non-orthologous sequence - C.variabilis:166 P.jiroveci:166

E1ZR35              	100.00%		L0PB62              	100.00%
Bootstrap support for E1ZR35 as seed ortholog is 100%.
Bootstrap support for L0PB62 as seed ortholog is 100%.

Group of orthologs #589. Best score 166 bits
Score difference with first non-orthologous sequence - C.variabilis:92 P.jiroveci:166

E1ZR20              	100.00%		L0PFQ3              	100.00%
Bootstrap support for E1ZR20 as seed ortholog is 99%.
Bootstrap support for L0PFQ3 as seed ortholog is 100%.

Group of orthologs #590. Best score 165 bits
Score difference with first non-orthologous sequence - C.variabilis:61 P.jiroveci:165

E1ZIK0              	100.00%		L0P967              	100.00%
E1ZC46              	16.71%		
E1ZA49              	5.39%		
E1ZMF7              	5.12%		
Bootstrap support for E1ZIK0 as seed ortholog is 91%.
Bootstrap support for L0P967 as seed ortholog is 100%.

Group of orthologs #591. Best score 165 bits
Score difference with first non-orthologous sequence - C.variabilis:41 P.jiroveci:85

E1Z5D6              	100.00%		L0PIS9              	100.00%
E1ZIR8              	23.81%		
Bootstrap support for E1Z5D6 as seed ortholog is 91%.
Bootstrap support for L0PIS9 as seed ortholog is 99%.

Group of orthologs #592. Best score 165 bits
Score difference with first non-orthologous sequence - C.variabilis:165 P.jiroveci:165

E1ZJX0              	100.00%		L0PAC4              	100.00%
                    	       		L0P871              	98.47%
Bootstrap support for E1ZJX0 as seed ortholog is 100%.
Bootstrap support for L0PAC4 as seed ortholog is 100%.

Group of orthologs #593. Best score 165 bits
Score difference with first non-orthologous sequence - C.variabilis:165 P.jiroveci:165

E1ZPQ9              	100.00%		L0PEA3              	100.00%
F2YGN3              	19.48%		
Bootstrap support for E1ZPQ9 as seed ortholog is 100%.
Bootstrap support for L0PEA3 as seed ortholog is 100%.

Group of orthologs #594. Best score 165 bits
Score difference with first non-orthologous sequence - C.variabilis:56 P.jiroveci:73

E1Z6U3              	100.00%		L0P8M4              	100.00%
Bootstrap support for E1Z6U3 as seed ortholog is 97%.
Bootstrap support for L0P8M4 as seed ortholog is 99%.

Group of orthologs #595. Best score 165 bits
Score difference with first non-orthologous sequence - C.variabilis:103 P.jiroveci:165

E1Z5M5              	100.00%		L0PCA8              	100.00%
Bootstrap support for E1Z5M5 as seed ortholog is 99%.
Bootstrap support for L0PCA8 as seed ortholog is 100%.

Group of orthologs #596. Best score 165 bits
Score difference with first non-orthologous sequence - C.variabilis:72 P.jiroveci:165

E1ZHB9              	100.00%		L0PBY3              	100.00%
Bootstrap support for E1ZHB9 as seed ortholog is 99%.
Bootstrap support for L0PBY3 as seed ortholog is 100%.

Group of orthologs #597. Best score 164 bits
Score difference with first non-orthologous sequence - C.variabilis:13 P.jiroveci:164

E1ZNC7              	100.00%		L0PEY0              	100.00%
                    	       		L0PAI4              	13.50%
Bootstrap support for E1ZNC7 as seed ortholog is 64%.
Alternative seed ortholog is E1ZHF8 (13 bits away from this cluster)
Bootstrap support for L0PEY0 as seed ortholog is 100%.

Group of orthologs #598. Best score 164 bits
Score difference with first non-orthologous sequence - C.variabilis:164 P.jiroveci:164

E1ZH92              	100.00%		L0PAR5              	100.00%
Bootstrap support for E1ZH92 as seed ortholog is 100%.
Bootstrap support for L0PAR5 as seed ortholog is 100%.

Group of orthologs #599. Best score 163 bits
Score difference with first non-orthologous sequence - C.variabilis:106 P.jiroveci:163

E1ZPC8              	100.00%		L0PG69              	100.00%
E1ZPJ1              	7.67%		
Bootstrap support for E1ZPC8 as seed ortholog is 99%.
Bootstrap support for L0PG69 as seed ortholog is 100%.

Group of orthologs #600. Best score 162 bits
Score difference with first non-orthologous sequence - C.variabilis:162 P.jiroveci:162

E1ZGS5              	100.00%		L0PBT9              	100.00%
                    	       		L0P9Y0              	52.09%
Bootstrap support for E1ZGS5 as seed ortholog is 100%.
Bootstrap support for L0PBT9 as seed ortholog is 100%.

Group of orthologs #601. Best score 162 bits
Score difference with first non-orthologous sequence - C.variabilis:162 P.jiroveci:162

E1ZME0              	100.00%		L0P8V3              	100.00%
Bootstrap support for E1ZME0 as seed ortholog is 100%.
Bootstrap support for L0P8V3 as seed ortholog is 100%.

Group of orthologs #602. Best score 162 bits
Score difference with first non-orthologous sequence - C.variabilis:162 P.jiroveci:162

E1ZH39              	100.00%		L0PFC0              	100.00%
Bootstrap support for E1ZH39 as seed ortholog is 100%.
Bootstrap support for L0PFC0 as seed ortholog is 100%.

Group of orthologs #603. Best score 161 bits
Score difference with first non-orthologous sequence - C.variabilis:161 P.jiroveci:161

E1Z8P7              	100.00%		L0P9L7              	100.00%
Bootstrap support for E1Z8P7 as seed ortholog is 100%.
Bootstrap support for L0P9L7 as seed ortholog is 100%.

Group of orthologs #604. Best score 161 bits
Score difference with first non-orthologous sequence - C.variabilis:161 P.jiroveci:161

E1ZSQ4              	100.00%		L0PBJ0              	100.00%
Bootstrap support for E1ZSQ4 as seed ortholog is 100%.
Bootstrap support for L0PBJ0 as seed ortholog is 100%.

Group of orthologs #605. Best score 161 bits
Score difference with first non-orthologous sequence - C.variabilis:161 P.jiroveci:161

E1ZTZ8              	100.00%		L0PGN0              	100.00%
Bootstrap support for E1ZTZ8 as seed ortholog is 100%.
Bootstrap support for L0PGN0 as seed ortholog is 100%.

Group of orthologs #606. Best score 160 bits
Score difference with first non-orthologous sequence - C.variabilis:160 P.jiroveci:160

E1Z8Q3              	100.00%		L0PAB3              	100.00%
Bootstrap support for E1Z8Q3 as seed ortholog is 100%.
Bootstrap support for L0PAB3 as seed ortholog is 100%.

Group of orthologs #607. Best score 160 bits
Score difference with first non-orthologous sequence - C.variabilis:160 P.jiroveci:160

E1ZHU3              	100.00%		L0PCI3              	100.00%
Bootstrap support for E1ZHU3 as seed ortholog is 100%.
Bootstrap support for L0PCI3 as seed ortholog is 100%.

Group of orthologs #608. Best score 159 bits
Score difference with first non-orthologous sequence - C.variabilis:101 P.jiroveci:159

E1Z5M4              	100.00%		L0PA07              	100.00%
Bootstrap support for E1Z5M4 as seed ortholog is 98%.
Bootstrap support for L0PA07 as seed ortholog is 100%.

Group of orthologs #609. Best score 159 bits
Score difference with first non-orthologous sequence - C.variabilis:159 P.jiroveci:159

E1ZEL7              	100.00%		L0P958              	100.00%
Bootstrap support for E1ZEL7 as seed ortholog is 100%.
Bootstrap support for L0P958 as seed ortholog is 100%.

Group of orthologs #610. Best score 159 bits
Score difference with first non-orthologous sequence - C.variabilis:95 P.jiroveci:159

E1Z921              	100.00%		L0PF05              	100.00%
Bootstrap support for E1Z921 as seed ortholog is 99%.
Bootstrap support for L0PF05 as seed ortholog is 100%.

Group of orthologs #611. Best score 159 bits
Score difference with first non-orthologous sequence - C.variabilis:159 P.jiroveci:159

E1ZBX7              	100.00%		L0PCF8              	100.00%
Bootstrap support for E1ZBX7 as seed ortholog is 100%.
Bootstrap support for L0PCF8 as seed ortholog is 100%.

Group of orthologs #612. Best score 159 bits
Score difference with first non-orthologous sequence - C.variabilis:112 P.jiroveci:159

E1ZJS0              	100.00%		L0PE85              	100.00%
Bootstrap support for E1ZJS0 as seed ortholog is 100%.
Bootstrap support for L0PE85 as seed ortholog is 100%.

Group of orthologs #613. Best score 159 bits
Score difference with first non-orthologous sequence - C.variabilis:159 P.jiroveci:159

E1ZQ09              	100.00%		L0PAJ0              	100.00%
Bootstrap support for E1ZQ09 as seed ortholog is 100%.
Bootstrap support for L0PAJ0 as seed ortholog is 100%.

Group of orthologs #614. Best score 158 bits
Score difference with first non-orthologous sequence - C.variabilis:158 P.jiroveci:158

E1Z4C7              	100.00%		L0PFZ6              	100.00%
                    	       		L0P7L2              	96.27%
Bootstrap support for E1Z4C7 as seed ortholog is 100%.
Bootstrap support for L0PFZ6 as seed ortholog is 100%.

Group of orthologs #615. Best score 158 bits
Score difference with first non-orthologous sequence - C.variabilis:40 P.jiroveci:158

E1ZBR0              	100.00%		L0P9N4              	100.00%
Bootstrap support for E1ZBR0 as seed ortholog is 97%.
Bootstrap support for L0P9N4 as seed ortholog is 100%.

Group of orthologs #616. Best score 158 bits
Score difference with first non-orthologous sequence - C.variabilis:158 P.jiroveci:158

E1ZKQ8              	100.00%		L0PDL5              	100.00%
Bootstrap support for E1ZKQ8 as seed ortholog is 100%.
Bootstrap support for L0PDL5 as seed ortholog is 100%.

Group of orthologs #617. Best score 157 bits
Score difference with first non-orthologous sequence - C.variabilis:157 P.jiroveci:157

E1ZDB9              	100.00%		L0PA48              	100.00%
Bootstrap support for E1ZDB9 as seed ortholog is 100%.
Bootstrap support for L0PA48 as seed ortholog is 100%.

Group of orthologs #618. Best score 157 bits
Score difference with first non-orthologous sequence - C.variabilis:157 P.jiroveci:157

E1ZKC6              	100.00%		L0P910              	100.00%
Bootstrap support for E1ZKC6 as seed ortholog is 100%.
Bootstrap support for L0P910 as seed ortholog is 100%.

Group of orthologs #619. Best score 157 bits
Score difference with first non-orthologous sequence - C.variabilis:157 P.jiroveci:157

E1ZLA4              	100.00%		L0PEY2              	100.00%
Bootstrap support for E1ZLA4 as seed ortholog is 100%.
Bootstrap support for L0PEY2 as seed ortholog is 100%.

Group of orthologs #620. Best score 156 bits
Score difference with first non-orthologous sequence - C.variabilis:156 P.jiroveci:96

E1Z6M6              	100.00%		L0PAG4              	100.00%
Bootstrap support for E1Z6M6 as seed ortholog is 100%.
Bootstrap support for L0PAG4 as seed ortholog is 99%.

Group of orthologs #621. Best score 156 bits
Score difference with first non-orthologous sequence - C.variabilis:156 P.jiroveci:156

E1ZIS6              	100.00%		L0PC70              	100.00%
Bootstrap support for E1ZIS6 as seed ortholog is 100%.
Bootstrap support for L0PC70 as seed ortholog is 100%.

Group of orthologs #622. Best score 156 bits
Score difference with first non-orthologous sequence - C.variabilis:10 P.jiroveci:61

E1ZSU6              	100.00%		L0PDS3              	100.00%
Bootstrap support for E1ZSU6 as seed ortholog is 60%.
Alternative seed ortholog is E1ZGX0 (10 bits away from this cluster)
Bootstrap support for L0PDS3 as seed ortholog is 94%.

Group of orthologs #623. Best score 155 bits
Score difference with first non-orthologous sequence - C.variabilis:155 P.jiroveci:155

E1ZFZ1              	100.00%		L0PF53              	100.00%
Bootstrap support for E1ZFZ1 as seed ortholog is 100%.
Bootstrap support for L0PF53 as seed ortholog is 100%.

Group of orthologs #624. Best score 155 bits
Score difference with first non-orthologous sequence - C.variabilis:155 P.jiroveci:155

E1ZGF3              	100.00%		L0PGZ5              	100.00%
Bootstrap support for E1ZGF3 as seed ortholog is 100%.
Bootstrap support for L0PGZ5 as seed ortholog is 100%.

Group of orthologs #625. Best score 155 bits
Score difference with first non-orthologous sequence - C.variabilis:155 P.jiroveci:155

E1ZNQ8              	100.00%		L0PDR0              	100.00%
Bootstrap support for E1ZNQ8 as seed ortholog is 100%.
Bootstrap support for L0PDR0 as seed ortholog is 100%.

Group of orthologs #626. Best score 155 bits
Score difference with first non-orthologous sequence - C.variabilis:16 P.jiroveci:155

E1ZTF2              	100.00%		L0PA60              	100.00%
Bootstrap support for E1ZTF2 as seed ortholog is 62%.
Alternative seed ortholog is E1ZRR5 (16 bits away from this cluster)
Bootstrap support for L0PA60 as seed ortholog is 100%.

Group of orthologs #627. Best score 154 bits
Score difference with first non-orthologous sequence - C.variabilis:154 P.jiroveci:154

E1ZFC0              	100.00%		L0PE53              	100.00%
E1ZBM1              	9.61%		
Bootstrap support for E1ZFC0 as seed ortholog is 100%.
Bootstrap support for L0PE53 as seed ortholog is 100%.

Group of orthologs #628. Best score 154 bits
Score difference with first non-orthologous sequence - C.variabilis:154 P.jiroveci:154

E1Z6X0              	100.00%		L0P9D6              	100.00%
Bootstrap support for E1Z6X0 as seed ortholog is 100%.
Bootstrap support for L0P9D6 as seed ortholog is 100%.

Group of orthologs #629. Best score 154 bits
Score difference with first non-orthologous sequence - C.variabilis:67 P.jiroveci:71

E1Z8L0              	100.00%		L0P9D2              	100.00%
Bootstrap support for E1Z8L0 as seed ortholog is 99%.
Bootstrap support for L0P9D2 as seed ortholog is 99%.

Group of orthologs #630. Best score 154 bits
Score difference with first non-orthologous sequence - C.variabilis:110 P.jiroveci:154

E1ZIV7              	100.00%		L0P7Z9              	100.00%
Bootstrap support for E1ZIV7 as seed ortholog is 99%.
Bootstrap support for L0P7Z9 as seed ortholog is 100%.

Group of orthologs #631. Best score 153 bits
Score difference with first non-orthologous sequence - C.variabilis:153 P.jiroveci:153

E1ZBK0              	100.00%		L0PG76              	100.00%
                    	       		L0PE70              	56.41%
Bootstrap support for E1ZBK0 as seed ortholog is 100%.
Bootstrap support for L0PG76 as seed ortholog is 100%.

Group of orthologs #632. Best score 153 bits
Score difference with first non-orthologous sequence - C.variabilis:40 P.jiroveci:80

E1ZIJ7              	100.00%		L0P9Z5              	100.00%
E1ZGJ4              	5.04%		
Bootstrap support for E1ZIJ7 as seed ortholog is 78%.
Bootstrap support for L0P9Z5 as seed ortholog is 95%.

Group of orthologs #633. Best score 153 bits
Score difference with first non-orthologous sequence - C.variabilis:90 P.jiroveci:72

E1ZRR2              	100.00%		L0PBK1              	100.00%
Bootstrap support for E1ZRR2 as seed ortholog is 97%.
Bootstrap support for L0PBK1 as seed ortholog is 95%.

Group of orthologs #634. Best score 152 bits
Score difference with first non-orthologous sequence - C.variabilis:54 P.jiroveci:152

E1ZHQ0              	100.00%		L0P7V4              	100.00%
Bootstrap support for E1ZHQ0 as seed ortholog is 93%.
Bootstrap support for L0P7V4 as seed ortholog is 100%.

Group of orthologs #635. Best score 152 bits
Score difference with first non-orthologous sequence - C.variabilis:152 P.jiroveci:152

E1ZRL8              	100.00%		L0PC96              	100.00%
Bootstrap support for E1ZRL8 as seed ortholog is 100%.
Bootstrap support for L0PC96 as seed ortholog is 100%.

Group of orthologs #636. Best score 152 bits
Score difference with first non-orthologous sequence - C.variabilis:152 P.jiroveci:58

E1ZQ01              	100.00%		L0PGP9              	100.00%
Bootstrap support for E1ZQ01 as seed ortholog is 100%.
Bootstrap support for L0PGP9 as seed ortholog is 97%.

Group of orthologs #637. Best score 151 bits
Score difference with first non-orthologous sequence - C.variabilis:151 P.jiroveci:151

E1Z6D3              	100.00%		L0PE03              	100.00%
Bootstrap support for E1Z6D3 as seed ortholog is 100%.
Bootstrap support for L0PE03 as seed ortholog is 100%.

Group of orthologs #638. Best score 151 bits
Score difference with first non-orthologous sequence - C.variabilis:151 P.jiroveci:151

E1ZDG9              	100.00%		L0P8I2              	100.00%
Bootstrap support for E1ZDG9 as seed ortholog is 100%.
Bootstrap support for L0P8I2 as seed ortholog is 100%.

Group of orthologs #639. Best score 151 bits
Score difference with first non-orthologous sequence - C.variabilis:151 P.jiroveci:151

E1ZLB5              	100.00%		L0PBM3              	100.00%
Bootstrap support for E1ZLB5 as seed ortholog is 100%.
Bootstrap support for L0PBM3 as seed ortholog is 100%.

Group of orthologs #640. Best score 151 bits
Score difference with first non-orthologous sequence - C.variabilis:151 P.jiroveci:151

E1ZPX5              	100.00%		L0PD76              	100.00%
Bootstrap support for E1ZPX5 as seed ortholog is 100%.
Bootstrap support for L0PD76 as seed ortholog is 100%.

Group of orthologs #641. Best score 149 bits
Score difference with first non-orthologous sequence - C.variabilis:149 P.jiroveci:149

E1ZGQ9              	100.00%		L0P9C9              	100.00%
Bootstrap support for E1ZGQ9 as seed ortholog is 100%.
Bootstrap support for L0P9C9 as seed ortholog is 100%.

Group of orthologs #642. Best score 148 bits
Score difference with first non-orthologous sequence - C.variabilis:148 P.jiroveci:148

E1ZGF4              	100.00%		L0PAE6              	100.00%
E1ZPV6              	23.62%		
E1ZT98              	19.92%		
Bootstrap support for E1ZGF4 as seed ortholog is 100%.
Bootstrap support for L0PAE6 as seed ortholog is 100%.

Group of orthologs #643. Best score 148 bits
Score difference with first non-orthologous sequence - C.variabilis:148 P.jiroveci:148

E1ZGG1              	100.00%		L0PEG0              	100.00%
Bootstrap support for E1ZGG1 as seed ortholog is 100%.
Bootstrap support for L0PEG0 as seed ortholog is 100%.

Group of orthologs #644. Best score 148 bits
Score difference with first non-orthologous sequence - C.variabilis:148 P.jiroveci:148

E1ZJG1              	100.00%		L0PHM9              	100.00%
Bootstrap support for E1ZJG1 as seed ortholog is 100%.
Bootstrap support for L0PHM9 as seed ortholog is 100%.

Group of orthologs #645. Best score 148 bits
Score difference with first non-orthologous sequence - C.variabilis:42 P.jiroveci:148

E1ZPW1              	100.00%		L0PF58              	100.00%
Bootstrap support for E1ZPW1 as seed ortholog is 95%.
Bootstrap support for L0PF58 as seed ortholog is 100%.

Group of orthologs #646. Best score 148 bits
Score difference with first non-orthologous sequence - C.variabilis:9 P.jiroveci:148

E1ZPW3              	100.00%		L0PFH2              	100.00%
Bootstrap support for E1ZPW3 as seed ortholog is 64%.
Alternative seed ortholog is E1ZNB5 (9 bits away from this cluster)
Bootstrap support for L0PFH2 as seed ortholog is 100%.

Group of orthologs #647. Best score 147 bits
Score difference with first non-orthologous sequence - C.variabilis:16 P.jiroveci:147

E1Z8G6              	100.00%		L0P848              	100.00%
                    	       		L0P867              	90.94%
Bootstrap support for E1Z8G6 as seed ortholog is 65%.
Alternative seed ortholog is E1ZRQ8 (16 bits away from this cluster)
Bootstrap support for L0P848 as seed ortholog is 100%.

Group of orthologs #648. Best score 146 bits
Score difference with first non-orthologous sequence - C.variabilis:54 P.jiroveci:146

E1ZKJ1              	100.00%		L0PD75              	100.00%
E1ZHU6              	6.78%		
E1ZKK6              	5.03%		
Bootstrap support for E1ZKJ1 as seed ortholog is 93%.
Bootstrap support for L0PD75 as seed ortholog is 100%.

Group of orthologs #649. Best score 146 bits
Score difference with first non-orthologous sequence - C.variabilis:44 P.jiroveci:2

E1ZD59              	100.00%		L0PFI0              	100.00%
Bootstrap support for E1ZD59 as seed ortholog is 86%.
Bootstrap support for L0PFI0 as seed ortholog is 48%.
Alternative seed ortholog is L0PAR1 (2 bits away from this cluster)

Group of orthologs #650. Best score 146 bits
Score difference with first non-orthologous sequence - C.variabilis:146 P.jiroveci:146

E1ZPQ8              	100.00%		L0PG54              	100.00%
Bootstrap support for E1ZPQ8 as seed ortholog is 100%.
Bootstrap support for L0PG54 as seed ortholog is 100%.

Group of orthologs #651. Best score 146 bits
Score difference with first non-orthologous sequence - C.variabilis:146 P.jiroveci:146

E1ZTK1              	100.00%		L0PFY9              	100.00%
Bootstrap support for E1ZTK1 as seed ortholog is 100%.
Bootstrap support for L0PFY9 as seed ortholog is 100%.

Group of orthologs #652. Best score 145 bits
Score difference with first non-orthologous sequence - C.variabilis:43 P.jiroveci:24

E1Z8I0              	100.00%		L0PDN2              	100.00%
E1ZKD9              	33.85%		
E1ZPR1              	24.78%		
E1Z7U2              	15.38%		
E1ZEF5              	14.49%		
Bootstrap support for E1Z8I0 as seed ortholog is 85%.
Bootstrap support for L0PDN2 as seed ortholog is 73%.
Alternative seed ortholog is L0PGT4 (24 bits away from this cluster)

Group of orthologs #653. Best score 145 bits
Score difference with first non-orthologous sequence - C.variabilis:76 P.jiroveci:145

E1ZBJ3              	100.00%		L0P8T2              	100.00%
                    	       		L0PA19              	100.00%
Bootstrap support for E1ZBJ3 as seed ortholog is 99%.
Bootstrap support for L0P8T2 as seed ortholog is 100%.
Bootstrap support for L0PA19 as seed ortholog is 100%.

Group of orthologs #654. Best score 145 bits
Score difference with first non-orthologous sequence - C.variabilis:47 P.jiroveci:145

E1ZLB3              	100.00%		L0PAD3              	100.00%
Bootstrap support for E1ZLB3 as seed ortholog is 77%.
Bootstrap support for L0PAD3 as seed ortholog is 100%.

Group of orthologs #655. Best score 145 bits
Score difference with first non-orthologous sequence - C.variabilis:145 P.jiroveci:145

E1ZTK2              	100.00%		L0P9F2              	100.00%
Bootstrap support for E1ZTK2 as seed ortholog is 100%.
Bootstrap support for L0P9F2 as seed ortholog is 100%.

Group of orthologs #656. Best score 144 bits
Score difference with first non-orthologous sequence - C.variabilis:144 P.jiroveci:144

E1Z6L1              	100.00%		L0P8Q5              	100.00%
Bootstrap support for E1Z6L1 as seed ortholog is 100%.
Bootstrap support for L0P8Q5 as seed ortholog is 100%.

Group of orthologs #657. Best score 144 bits
Score difference with first non-orthologous sequence - C.variabilis:144 P.jiroveci:144

E1Z6V1              	100.00%		L0PA35              	100.00%
Bootstrap support for E1Z6V1 as seed ortholog is 100%.
Bootstrap support for L0PA35 as seed ortholog is 100%.

Group of orthologs #658. Best score 144 bits
Score difference with first non-orthologous sequence - C.variabilis:144 P.jiroveci:144

E1Z6Q5              	100.00%		L0PCH6              	100.00%
Bootstrap support for E1Z6Q5 as seed ortholog is 100%.
Bootstrap support for L0PCH6 as seed ortholog is 100%.

Group of orthologs #659. Best score 144 bits
Score difference with first non-orthologous sequence - C.variabilis:64 P.jiroveci:144

E1ZD43              	100.00%		L0P7A4              	100.00%
Bootstrap support for E1ZD43 as seed ortholog is 95%.
Bootstrap support for L0P7A4 as seed ortholog is 100%.

Group of orthologs #660. Best score 144 bits
Score difference with first non-orthologous sequence - C.variabilis:144 P.jiroveci:144

E1ZA84              	100.00%		L0PBU7              	100.00%
Bootstrap support for E1ZA84 as seed ortholog is 100%.
Bootstrap support for L0PBU7 as seed ortholog is 100%.

Group of orthologs #661. Best score 144 bits
Score difference with first non-orthologous sequence - C.variabilis:144 P.jiroveci:144

E1ZDS1              	100.00%		L0PFV3              	100.00%
Bootstrap support for E1ZDS1 as seed ortholog is 100%.
Bootstrap support for L0PFV3 as seed ortholog is 100%.

Group of orthologs #662. Best score 144 bits
Score difference with first non-orthologous sequence - C.variabilis:144 P.jiroveci:144

E1ZL54              	100.00%		L0PDJ4              	100.00%
Bootstrap support for E1ZL54 as seed ortholog is 100%.
Bootstrap support for L0PDJ4 as seed ortholog is 100%.

Group of orthologs #663. Best score 144 bits
Score difference with first non-orthologous sequence - C.variabilis:27 P.jiroveci:90

E1ZJC8              	100.00%		L0PFZ5              	100.00%
Bootstrap support for E1ZJC8 as seed ortholog is 75%.
Bootstrap support for L0PFZ5 as seed ortholog is 99%.

Group of orthologs #664. Best score 144 bits
Score difference with first non-orthologous sequence - C.variabilis:144 P.jiroveci:144

E1ZTF6              	100.00%		L0P7E9              	100.00%
Bootstrap support for E1ZTF6 as seed ortholog is 100%.
Bootstrap support for L0P7E9 as seed ortholog is 100%.

Group of orthologs #665. Best score 143 bits
Score difference with first non-orthologous sequence - C.variabilis:143 P.jiroveci:143

E1Z7Z2              	100.00%		L0P9G8              	100.00%
                    	       		L0PDI0              	55.22%
Bootstrap support for E1Z7Z2 as seed ortholog is 100%.
Bootstrap support for L0P9G8 as seed ortholog is 100%.

Group of orthologs #666. Best score 143 bits
Score difference with first non-orthologous sequence - C.variabilis:143 P.jiroveci:143

E1ZEH0              	100.00%		L0PFW7              	100.00%
Bootstrap support for E1ZEH0 as seed ortholog is 100%.
Bootstrap support for L0PFW7 as seed ortholog is 100%.

Group of orthologs #667. Best score 143 bits
Score difference with first non-orthologous sequence - C.variabilis:69 P.jiroveci:143

E1ZMY6              	100.00%		L0PBS3              	100.00%
Bootstrap support for E1ZMY6 as seed ortholog is 89%.
Bootstrap support for L0PBS3 as seed ortholog is 100%.

Group of orthologs #668. Best score 142 bits
Score difference with first non-orthologous sequence - C.variabilis:142 P.jiroveci:142

E1Z527              	100.00%		L0PFW9              	100.00%
E1ZTK9              	15.38%		
Bootstrap support for E1Z527 as seed ortholog is 100%.
Bootstrap support for L0PFW9 as seed ortholog is 100%.

Group of orthologs #669. Best score 142 bits
Score difference with first non-orthologous sequence - C.variabilis:142 P.jiroveci:142

E1Z593              	100.00%		L0P800              	100.00%
Bootstrap support for E1Z593 as seed ortholog is 100%.
Bootstrap support for L0P800 as seed ortholog is 100%.

Group of orthologs #670. Best score 142 bits
Score difference with first non-orthologous sequence - C.variabilis:142 P.jiroveci:142

E1ZNM9              	100.00%		L0P9I3              	100.00%
Bootstrap support for E1ZNM9 as seed ortholog is 100%.
Bootstrap support for L0P9I3 as seed ortholog is 100%.

Group of orthologs #671. Best score 142 bits
Score difference with first non-orthologous sequence - C.variabilis:142 P.jiroveci:142

E1ZNZ9              	100.00%		L0P9T6              	100.00%
Bootstrap support for E1ZNZ9 as seed ortholog is 100%.
Bootstrap support for L0P9T6 as seed ortholog is 100%.

Group of orthologs #672. Best score 141 bits
Score difference with first non-orthologous sequence - C.variabilis:141 P.jiroveci:141

E1Z9A2              	100.00%		L0P957              	100.00%
E1ZPG4              	19.26%		
Bootstrap support for E1Z9A2 as seed ortholog is 100%.
Bootstrap support for L0P957 as seed ortholog is 100%.

Group of orthologs #673. Best score 141 bits
Score difference with first non-orthologous sequence - C.variabilis:141 P.jiroveci:141

E1Z7N2              	100.00%		L0PBX0              	100.00%
Bootstrap support for E1Z7N2 as seed ortholog is 100%.
Bootstrap support for L0PBX0 as seed ortholog is 100%.

Group of orthologs #674. Best score 141 bits
Score difference with first non-orthologous sequence - C.variabilis:141 P.jiroveci:141

E1ZD13              	100.00%		L0PAB8              	100.00%
Bootstrap support for E1ZD13 as seed ortholog is 100%.
Bootstrap support for L0PAB8 as seed ortholog is 100%.

Group of orthologs #675. Best score 141 bits
Score difference with first non-orthologous sequence - C.variabilis:141 P.jiroveci:141

E1Z9K3              	100.00%		L0PFJ8              	100.00%
Bootstrap support for E1Z9K3 as seed ortholog is 100%.
Bootstrap support for L0PFJ8 as seed ortholog is 100%.

Group of orthologs #676. Best score 140 bits
Score difference with first non-orthologous sequence - C.variabilis:44 P.jiroveci:140

E1ZT43              	100.00%		L0PBR7              	100.00%
E1Z2X4              	22.92%		
E1ZRB8              	21.88%		
E1ZRC5              	21.88%		
E1ZSZ3              	18.75%		
E1ZGZ6              	16.67%		
Bootstrap support for E1ZT43 as seed ortholog is 99%.
Bootstrap support for L0PBR7 as seed ortholog is 100%.

Group of orthologs #677. Best score 140 bits
Score difference with first non-orthologous sequence - C.variabilis:140 P.jiroveci:140

E1Z2U1              	100.00%		L0PFY6              	100.00%
Bootstrap support for E1Z2U1 as seed ortholog is 100%.
Bootstrap support for L0PFY6 as seed ortholog is 100%.

Group of orthologs #678. Best score 140 bits
Score difference with first non-orthologous sequence - C.variabilis:86 P.jiroveci:140

E1ZDJ0              	100.00%		L0P8L5              	100.00%
Bootstrap support for E1ZDJ0 as seed ortholog is 99%.
Bootstrap support for L0P8L5 as seed ortholog is 100%.

Group of orthologs #679. Best score 139 bits
Score difference with first non-orthologous sequence - C.variabilis:139 P.jiroveci:139

E1ZMD3              	100.00%		L0PH23              	100.00%
Bootstrap support for E1ZMD3 as seed ortholog is 100%.
Bootstrap support for L0PH23 as seed ortholog is 100%.

Group of orthologs #680. Best score 139 bits
Score difference with first non-orthologous sequence - C.variabilis:139 P.jiroveci:139

E1ZT58              	100.00%		L0PCP5              	100.00%
Bootstrap support for E1ZT58 as seed ortholog is 100%.
Bootstrap support for L0PCP5 as seed ortholog is 100%.

Group of orthologs #681. Best score 139 bits
Score difference with first non-orthologous sequence - C.variabilis:139 P.jiroveci:139

E1ZTK8              	100.00%		L0PGY5              	100.00%
Bootstrap support for E1ZTK8 as seed ortholog is 100%.
Bootstrap support for L0PGY5 as seed ortholog is 100%.

Group of orthologs #682. Best score 138 bits
Score difference with first non-orthologous sequence - C.variabilis:138 P.jiroveci:138

E1Z708              	100.00%		L0PFG9              	100.00%
Bootstrap support for E1Z708 as seed ortholog is 100%.
Bootstrap support for L0PFG9 as seed ortholog is 100%.

Group of orthologs #683. Best score 138 bits
Score difference with first non-orthologous sequence - C.variabilis:138 P.jiroveci:138

E1ZCS6              	100.00%		L0PDX2              	100.00%
Bootstrap support for E1ZCS6 as seed ortholog is 100%.
Bootstrap support for L0PDX2 as seed ortholog is 100%.

Group of orthologs #684. Best score 138 bits
Score difference with first non-orthologous sequence - C.variabilis:138 P.jiroveci:138

E1ZI32              	100.00%		L0PBZ1              	100.00%
Bootstrap support for E1ZI32 as seed ortholog is 100%.
Bootstrap support for L0PBZ1 as seed ortholog is 100%.

Group of orthologs #685. Best score 137 bits
Score difference with first non-orthologous sequence - C.variabilis:137 P.jiroveci:137

E1ZIN7              	100.00%		L0PD11              	100.00%
Bootstrap support for E1ZIN7 as seed ortholog is 100%.
Bootstrap support for L0PD11 as seed ortholog is 100%.

Group of orthologs #686. Best score 137 bits
Score difference with first non-orthologous sequence - C.variabilis:137 P.jiroveci:137

E1ZM86              	100.00%		L0PG84              	100.00%
Bootstrap support for E1ZM86 as seed ortholog is 100%.
Bootstrap support for L0PG84 as seed ortholog is 100%.

Group of orthologs #687. Best score 136 bits
Score difference with first non-orthologous sequence - C.variabilis:136 P.jiroveci:136

E1ZJ66              	100.00%		L0PDS2              	100.00%
Bootstrap support for E1ZJ66 as seed ortholog is 100%.
Bootstrap support for L0PDS2 as seed ortholog is 100%.

Group of orthologs #688. Best score 136 bits
Score difference with first non-orthologous sequence - C.variabilis:136 P.jiroveci:136

E1ZQX0              	100.00%		L0P7N9              	100.00%
Bootstrap support for E1ZQX0 as seed ortholog is 100%.
Bootstrap support for L0P7N9 as seed ortholog is 100%.

Group of orthologs #689. Best score 136 bits
Score difference with first non-orthologous sequence - C.variabilis:136 P.jiroveci:94

E1ZSS2              	100.00%		L0PDB2              	100.00%
Bootstrap support for E1ZSS2 as seed ortholog is 100%.
Bootstrap support for L0PDB2 as seed ortholog is 98%.

Group of orthologs #690. Best score 136 bits
Score difference with first non-orthologous sequence - C.variabilis:76 P.jiroveci:39

E1ZRJ3              	100.00%		L0PEX6              	100.00%
Bootstrap support for E1ZRJ3 as seed ortholog is 99%.
Bootstrap support for L0PEX6 as seed ortholog is 93%.

Group of orthologs #691. Best score 135 bits
Score difference with first non-orthologous sequence - C.variabilis:135 P.jiroveci:135

E1Z4X2              	100.00%		L0PI55              	100.00%
                    	       		L0P840              	83.97%
Bootstrap support for E1Z4X2 as seed ortholog is 100%.
Bootstrap support for L0PI55 as seed ortholog is 100%.

Group of orthologs #692. Best score 135 bits
Score difference with first non-orthologous sequence - C.variabilis:135 P.jiroveci:135

E1Z863              	100.00%		L0PF42              	100.00%
                    	       		L0PD01              	98.54%
Bootstrap support for E1Z863 as seed ortholog is 100%.
Bootstrap support for L0PF42 as seed ortholog is 100%.

Group of orthologs #693. Best score 135 bits
Score difference with first non-orthologous sequence - C.variabilis:135 P.jiroveci:135

E1ZAU6              	100.00%		L0P9P8              	100.00%
Bootstrap support for E1ZAU6 as seed ortholog is 100%.
Bootstrap support for L0P9P8 as seed ortholog is 100%.

Group of orthologs #694. Best score 135 bits
Score difference with first non-orthologous sequence - C.variabilis:135 P.jiroveci:135

E1Z8R6              	100.00%		L0PD41              	100.00%
Bootstrap support for E1Z8R6 as seed ortholog is 100%.
Bootstrap support for L0PD41 as seed ortholog is 100%.

Group of orthologs #695. Best score 135 bits
Score difference with first non-orthologous sequence - C.variabilis:135 P.jiroveci:135

E1ZPD5              	100.00%		L0PBD2              	100.00%
Bootstrap support for E1ZPD5 as seed ortholog is 100%.
Bootstrap support for L0PBD2 as seed ortholog is 100%.

Group of orthologs #696. Best score 135 bits
Score difference with first non-orthologous sequence - C.variabilis:135 P.jiroveci:34

E1ZQT2              	100.00%		L0PCJ0              	100.00%
Bootstrap support for E1ZQT2 as seed ortholog is 100%.
Bootstrap support for L0PCJ0 as seed ortholog is 72%.
Alternative seed ortholog is L0PGZ6 (34 bits away from this cluster)

Group of orthologs #697. Best score 134 bits
Score difference with first non-orthologous sequence - C.variabilis:134 P.jiroveci:134

E1Z354              	100.00%		L0PF44              	100.00%
Bootstrap support for E1Z354 as seed ortholog is 100%.
Bootstrap support for L0PF44 as seed ortholog is 100%.

Group of orthologs #698. Best score 134 bits
Score difference with first non-orthologous sequence - C.variabilis:134 P.jiroveci:134

E1Z9S6              	100.00%		L0P8H6              	100.00%
Bootstrap support for E1Z9S6 as seed ortholog is 100%.
Bootstrap support for L0P8H6 as seed ortholog is 100%.

Group of orthologs #699. Best score 134 bits
Score difference with first non-orthologous sequence - C.variabilis:32 P.jiroveci:134

E1Z9Q6              	100.00%		L0PA51              	100.00%
Bootstrap support for E1Z9Q6 as seed ortholog is 91%.
Bootstrap support for L0PA51 as seed ortholog is 100%.

Group of orthologs #700. Best score 134 bits
Score difference with first non-orthologous sequence - C.variabilis:134 P.jiroveci:134

E1Z5Y8              	100.00%		L0PFP0              	100.00%
Bootstrap support for E1Z5Y8 as seed ortholog is 100%.
Bootstrap support for L0PFP0 as seed ortholog is 100%.

Group of orthologs #701. Best score 134 bits
Score difference with first non-orthologous sequence - C.variabilis:134 P.jiroveci:134

E1ZQE2              	100.00%		L0P8P7              	100.00%
Bootstrap support for E1ZQE2 as seed ortholog is 100%.
Bootstrap support for L0P8P7 as seed ortholog is 100%.

Group of orthologs #702. Best score 134 bits
Score difference with first non-orthologous sequence - C.variabilis:134 P.jiroveci:134

E1ZRQ4              	100.00%		L0PCX0              	100.00%
Bootstrap support for E1ZRQ4 as seed ortholog is 100%.
Bootstrap support for L0PCX0 as seed ortholog is 100%.

Group of orthologs #703. Best score 134 bits
Score difference with first non-orthologous sequence - C.variabilis:74 P.jiroveci:69

E1ZUM1              	100.00%		L0PDW3              	100.00%
Bootstrap support for E1ZUM1 as seed ortholog is 99%.
Bootstrap support for L0PDW3 as seed ortholog is 99%.

Group of orthologs #704. Best score 134 bits
Score difference with first non-orthologous sequence - C.variabilis:134 P.jiroveci:134

E1ZTG7              	100.00%		L0PG87              	100.00%
Bootstrap support for E1ZTG7 as seed ortholog is 100%.
Bootstrap support for L0PG87 as seed ortholog is 100%.

Group of orthologs #705. Best score 133 bits
Score difference with first non-orthologous sequence - C.variabilis:133 P.jiroveci:133

E1Z986              	100.00%		L0P9F5              	100.00%
Bootstrap support for E1Z986 as seed ortholog is 100%.
Bootstrap support for L0P9F5 as seed ortholog is 100%.

Group of orthologs #706. Best score 133 bits
Score difference with first non-orthologous sequence - C.variabilis:133 P.jiroveci:133

E1Z9F5              	100.00%		L0PAC7              	100.00%
Bootstrap support for E1Z9F5 as seed ortholog is 100%.
Bootstrap support for L0PAC7 as seed ortholog is 100%.

Group of orthologs #707. Best score 132 bits
Score difference with first non-orthologous sequence - C.variabilis:53 P.jiroveci:132

E1Z4Q6              	100.00%		L0PD97              	100.00%
Bootstrap support for E1Z4Q6 as seed ortholog is 96%.
Bootstrap support for L0PD97 as seed ortholog is 100%.

Group of orthologs #708. Best score 132 bits
Score difference with first non-orthologous sequence - C.variabilis:132 P.jiroveci:132

E1Z933              	100.00%		L0P9U0              	100.00%
Bootstrap support for E1Z933 as seed ortholog is 100%.
Bootstrap support for L0P9U0 as seed ortholog is 100%.

Group of orthologs #709. Best score 132 bits
Score difference with first non-orthologous sequence - C.variabilis:89 P.jiroveci:132

E1ZGB3              	100.00%		L0PE97              	100.00%
Bootstrap support for E1ZGB3 as seed ortholog is 99%.
Bootstrap support for L0PE97 as seed ortholog is 100%.

Group of orthologs #710. Best score 132 bits
Score difference with first non-orthologous sequence - C.variabilis:132 P.jiroveci:132

E1ZQJ3              	100.00%		L0PEK7              	100.00%
Bootstrap support for E1ZQJ3 as seed ortholog is 100%.
Bootstrap support for L0PEK7 as seed ortholog is 100%.

Group of orthologs #711. Best score 131 bits
Score difference with first non-orthologous sequence - C.variabilis:52 P.jiroveci:131

E1Z7T8              	100.00%		L0PD77              	100.00%
E1Z6X8              	14.62%		
Bootstrap support for E1Z7T8 as seed ortholog is 95%.
Bootstrap support for L0PD77 as seed ortholog is 100%.

Group of orthologs #712. Best score 131 bits
Score difference with first non-orthologous sequence - C.variabilis:131 P.jiroveci:131

E1ZJK4              	100.00%		L0PDR9              	100.00%
                    	       		L0P8I3              	73.37%
Bootstrap support for E1ZJK4 as seed ortholog is 100%.
Bootstrap support for L0PDR9 as seed ortholog is 100%.

Group of orthologs #713. Best score 131 bits
Score difference with first non-orthologous sequence - C.variabilis:131 P.jiroveci:131

E1ZG05              	100.00%		L0PAM2              	100.00%
Bootstrap support for E1ZG05 as seed ortholog is 100%.
Bootstrap support for L0PAM2 as seed ortholog is 100%.

Group of orthologs #714. Best score 131 bits
Score difference with first non-orthologous sequence - C.variabilis:131 P.jiroveci:131

E1ZHM2              	100.00%		L0PHA7              	100.00%
Bootstrap support for E1ZHM2 as seed ortholog is 100%.
Bootstrap support for L0PHA7 as seed ortholog is 100%.

Group of orthologs #715. Best score 130 bits
Score difference with first non-orthologous sequence - C.variabilis:55 P.jiroveci:48

E1ZJX1              	100.00%		L0PCC3              	100.00%
E1ZEF0              	9.41%		
Bootstrap support for E1ZJX1 as seed ortholog is 98%.
Bootstrap support for L0PCC3 as seed ortholog is 98%.

Group of orthologs #716. Best score 129 bits
Score difference with first non-orthologous sequence - C.variabilis:129 P.jiroveci:129

E1Z753              	100.00%		L0PDH1              	100.00%
Bootstrap support for E1Z753 as seed ortholog is 100%.
Bootstrap support for L0PDH1 as seed ortholog is 100%.

Group of orthologs #717. Best score 129 bits
Score difference with first non-orthologous sequence - C.variabilis:129 P.jiroveci:129

E1Z5T1              	100.00%		L0PG04              	100.00%
Bootstrap support for E1Z5T1 as seed ortholog is 100%.
Bootstrap support for L0PG04 as seed ortholog is 100%.

Group of orthologs #718. Best score 129 bits
Score difference with first non-orthologous sequence - C.variabilis:129 P.jiroveci:129

E1ZCD0              	100.00%		L0P9W6              	100.00%
Bootstrap support for E1ZCD0 as seed ortholog is 100%.
Bootstrap support for L0P9W6 as seed ortholog is 100%.

Group of orthologs #719. Best score 129 bits
Score difference with first non-orthologous sequence - C.variabilis:129 P.jiroveci:129

E1Z792              	100.00%		L0PGR5              	100.00%
Bootstrap support for E1Z792 as seed ortholog is 100%.
Bootstrap support for L0PGR5 as seed ortholog is 100%.

Group of orthologs #720. Best score 129 bits
Score difference with first non-orthologous sequence - C.variabilis:35 P.jiroveci:129

E1ZC65              	100.00%		L0PEQ4              	100.00%
Bootstrap support for E1ZC65 as seed ortholog is 82%.
Bootstrap support for L0PEQ4 as seed ortholog is 100%.

Group of orthologs #721. Best score 129 bits
Score difference with first non-orthologous sequence - C.variabilis:59 P.jiroveci:129

E1ZH43              	100.00%		L0PDN5              	100.00%
Bootstrap support for E1ZH43 as seed ortholog is 98%.
Bootstrap support for L0PDN5 as seed ortholog is 100%.

Group of orthologs #722. Best score 129 bits
Score difference with first non-orthologous sequence - C.variabilis:129 P.jiroveci:129

E1ZTF1              	100.00%		L0PA28              	100.00%
Bootstrap support for E1ZTF1 as seed ortholog is 100%.
Bootstrap support for L0PA28 as seed ortholog is 100%.

Group of orthologs #723. Best score 128 bits
Score difference with first non-orthologous sequence - C.variabilis:29 P.jiroveci:49

E1ZJ71              	100.00%		L0PC81              	100.00%
E1Z363              	6.07%		
Bootstrap support for E1ZJ71 as seed ortholog is 81%.
Bootstrap support for L0PC81 as seed ortholog is 89%.

Group of orthologs #724. Best score 128 bits
Score difference with first non-orthologous sequence - C.variabilis:128 P.jiroveci:128

E1Z5B7              	100.00%		L0PEN8              	100.00%
Bootstrap support for E1Z5B7 as seed ortholog is 100%.
Bootstrap support for L0PEN8 as seed ortholog is 100%.

Group of orthologs #725. Best score 128 bits
Score difference with first non-orthologous sequence - C.variabilis:36 P.jiroveci:39

E1ZCR1              	100.00%		L0PAG6              	100.00%
Bootstrap support for E1ZCR1 as seed ortholog is 85%.
Bootstrap support for L0PAG6 as seed ortholog is 84%.

Group of orthologs #726. Best score 128 bits
Score difference with first non-orthologous sequence - C.variabilis:128 P.jiroveci:128

E1ZFR7              	100.00%		L0P9T3              	100.00%
Bootstrap support for E1ZFR7 as seed ortholog is 100%.
Bootstrap support for L0P9T3 as seed ortholog is 100%.

Group of orthologs #727. Best score 128 bits
Score difference with first non-orthologous sequence - C.variabilis:59 P.jiroveci:128

E1ZHH3              	100.00%		L0P9L0              	100.00%
Bootstrap support for E1ZHH3 as seed ortholog is 99%.
Bootstrap support for L0P9L0 as seed ortholog is 100%.

Group of orthologs #728. Best score 128 bits
Score difference with first non-orthologous sequence - C.variabilis:128 P.jiroveci:128

E1ZMU0              	100.00%		L0P9I5              	100.00%
Bootstrap support for E1ZMU0 as seed ortholog is 100%.
Bootstrap support for L0P9I5 as seed ortholog is 100%.

Group of orthologs #729. Best score 128 bits
Score difference with first non-orthologous sequence - C.variabilis:128 P.jiroveci:128

E1ZQH4              	100.00%		L0PD86              	100.00%
Bootstrap support for E1ZQH4 as seed ortholog is 100%.
Bootstrap support for L0PD86 as seed ortholog is 100%.

Group of orthologs #730. Best score 127 bits
Score difference with first non-orthologous sequence - C.variabilis:74 P.jiroveci:127

E1ZL97              	100.00%		L0P746              	100.00%
Bootstrap support for E1ZL97 as seed ortholog is 97%.
Bootstrap support for L0P746 as seed ortholog is 100%.

Group of orthologs #731. Best score 127 bits
Score difference with first non-orthologous sequence - C.variabilis:127 P.jiroveci:127

F2YGM6              	100.00%		L0P8A1              	100.00%
Bootstrap support for F2YGM6 as seed ortholog is 100%.
Bootstrap support for L0P8A1 as seed ortholog is 100%.

Group of orthologs #732. Best score 126 bits
Score difference with first non-orthologous sequence - C.variabilis:126 P.jiroveci:126

E1ZLS7              	100.00%		L0PAW7              	100.00%
E1Z675              	9.40%		
Bootstrap support for E1ZLS7 as seed ortholog is 100%.
Bootstrap support for L0PAW7 as seed ortholog is 100%.

Group of orthologs #733. Best score 126 bits
Score difference with first non-orthologous sequence - C.variabilis:126 P.jiroveci:126

E1Z4N5              	100.00%		L0P9M3              	100.00%
Bootstrap support for E1Z4N5 as seed ortholog is 100%.
Bootstrap support for L0P9M3 as seed ortholog is 100%.

Group of orthologs #734. Best score 126 bits
Score difference with first non-orthologous sequence - C.variabilis:126 P.jiroveci:126

E1Z8P1              	100.00%		L0PFN8              	100.00%
Bootstrap support for E1Z8P1 as seed ortholog is 100%.
Bootstrap support for L0PFN8 as seed ortholog is 100%.

Group of orthologs #735. Best score 126 bits
Score difference with first non-orthologous sequence - C.variabilis:126 P.jiroveci:126

E1ZHY5              	100.00%		L0P9B0              	100.00%
Bootstrap support for E1ZHY5 as seed ortholog is 100%.
Bootstrap support for L0P9B0 as seed ortholog is 100%.

Group of orthologs #736. Best score 126 bits
Score difference with first non-orthologous sequence - C.variabilis:65 P.jiroveci:126

E1ZEI0              	100.00%		L0PFK9              	100.00%
Bootstrap support for E1ZEI0 as seed ortholog is 95%.
Bootstrap support for L0PFK9 as seed ortholog is 100%.

Group of orthologs #737. Best score 126 bits
Score difference with first non-orthologous sequence - C.variabilis:126 P.jiroveci:126

E1ZME1              	100.00%		L0P723              	100.00%
Bootstrap support for E1ZME1 as seed ortholog is 100%.
Bootstrap support for L0P723 as seed ortholog is 100%.

Group of orthologs #738. Best score 126 bits
Score difference with first non-orthologous sequence - C.variabilis:48 P.jiroveci:126

E1ZJV1              	100.00%		L0PF75              	100.00%
Bootstrap support for E1ZJV1 as seed ortholog is 93%.
Bootstrap support for L0PF75 as seed ortholog is 100%.

Group of orthologs #739. Best score 126 bits
Score difference with first non-orthologous sequence - C.variabilis:126 P.jiroveci:126

E1ZS87              	100.00%		L0PAY0              	100.00%
Bootstrap support for E1ZS87 as seed ortholog is 100%.
Bootstrap support for L0PAY0 as seed ortholog is 100%.

Group of orthologs #740. Best score 126 bits
Score difference with first non-orthologous sequence - C.variabilis:71 P.jiroveci:126

E1ZN93              	100.00%		L0PG46              	100.00%
Bootstrap support for E1ZN93 as seed ortholog is 99%.
Bootstrap support for L0PG46 as seed ortholog is 100%.

Group of orthologs #741. Best score 125 bits
Score difference with first non-orthologous sequence - C.variabilis:77 P.jiroveci:125

E1ZDK7              	100.00%		L0P7C7              	100.00%
Bootstrap support for E1ZDK7 as seed ortholog is 99%.
Bootstrap support for L0P7C7 as seed ortholog is 100%.

Group of orthologs #742. Best score 125 bits
Score difference with first non-orthologous sequence - C.variabilis:125 P.jiroveci:125

E1ZE78              	100.00%		L0PA27              	100.00%
Bootstrap support for E1ZE78 as seed ortholog is 100%.
Bootstrap support for L0PA27 as seed ortholog is 100%.

Group of orthologs #743. Best score 125 bits
Score difference with first non-orthologous sequence - C.variabilis:125 P.jiroveci:125

E1ZGF5              	100.00%		L0PAA1              	100.00%
Bootstrap support for E1ZGF5 as seed ortholog is 100%.
Bootstrap support for L0PAA1 as seed ortholog is 100%.

Group of orthologs #744. Best score 125 bits
Score difference with first non-orthologous sequence - C.variabilis:125 P.jiroveci:125

E1ZLG4              	100.00%		L0PGP3              	100.00%
Bootstrap support for E1ZLG4 as seed ortholog is 100%.
Bootstrap support for L0PGP3 as seed ortholog is 100%.

Group of orthologs #745. Best score 124 bits
Score difference with first non-orthologous sequence - C.variabilis:124 P.jiroveci:124

E1ZDE6              	100.00%		L0PB24              	100.00%
Bootstrap support for E1ZDE6 as seed ortholog is 100%.
Bootstrap support for L0PB24 as seed ortholog is 100%.

Group of orthologs #746. Best score 124 bits
Score difference with first non-orthologous sequence - C.variabilis:37 P.jiroveci:124

E1ZEE8              	100.00%		L0PAF0              	100.00%
Bootstrap support for E1ZEE8 as seed ortholog is 83%.
Bootstrap support for L0PAF0 as seed ortholog is 100%.

Group of orthologs #747. Best score 124 bits
Score difference with first non-orthologous sequence - C.variabilis:124 P.jiroveci:124

E1ZKW8              	100.00%		L0PFZ8              	100.00%
Bootstrap support for E1ZKW8 as seed ortholog is 100%.
Bootstrap support for L0PFZ8 as seed ortholog is 100%.

Group of orthologs #748. Best score 123 bits
Score difference with first non-orthologous sequence - C.variabilis:36 P.jiroveci:11

E1Z3P5              	100.00%		L0PEI1              	100.00%
Bootstrap support for E1Z3P5 as seed ortholog is 91%.
Bootstrap support for L0PEI1 as seed ortholog is 65%.
Alternative seed ortholog is L0PC59 (11 bits away from this cluster)

Group of orthologs #749. Best score 123 bits
Score difference with first non-orthologous sequence - C.variabilis:123 P.jiroveci:66

E1ZAM9              	100.00%		L0PD30              	100.00%
Bootstrap support for E1ZAM9 as seed ortholog is 100%.
Bootstrap support for L0PD30 as seed ortholog is 97%.

Group of orthologs #750. Best score 123 bits
Score difference with first non-orthologous sequence - C.variabilis:123 P.jiroveci:123

E1ZMW1              	100.00%		L0PBA3              	100.00%
Bootstrap support for E1ZMW1 as seed ortholog is 100%.
Bootstrap support for L0PBA3 as seed ortholog is 100%.

Group of orthologs #751. Best score 122 bits
Score difference with first non-orthologous sequence - C.variabilis:122 P.jiroveci:122

E1Z8B5              	100.00%		L0PGG9              	100.00%
Bootstrap support for E1Z8B5 as seed ortholog is 100%.
Bootstrap support for L0PGG9 as seed ortholog is 100%.

Group of orthologs #752. Best score 122 bits
Score difference with first non-orthologous sequence - C.variabilis:122 P.jiroveci:122

E1ZEC1              	100.00%		L0PEI9              	100.00%
Bootstrap support for E1ZEC1 as seed ortholog is 100%.
Bootstrap support for L0PEI9 as seed ortholog is 100%.

Group of orthologs #753. Best score 122 bits
Score difference with first non-orthologous sequence - C.variabilis:122 P.jiroveci:122

E1ZH55              	100.00%		L0PD35              	100.00%
Bootstrap support for E1ZH55 as seed ortholog is 100%.
Bootstrap support for L0PD35 as seed ortholog is 100%.

Group of orthologs #754. Best score 121 bits
Score difference with first non-orthologous sequence - C.variabilis:121 P.jiroveci:121

E1ZHC5              	100.00%		L0P7D2              	100.00%
Bootstrap support for E1ZHC5 as seed ortholog is 100%.
Bootstrap support for L0P7D2 as seed ortholog is 100%.

Group of orthologs #755. Best score 121 bits
Score difference with first non-orthologous sequence - C.variabilis:121 P.jiroveci:121

E1ZGT4              	100.00%		L0PCX8              	100.00%
Bootstrap support for E1ZGT4 as seed ortholog is 100%.
Bootstrap support for L0PCX8 as seed ortholog is 100%.

Group of orthologs #756. Best score 121 bits
Score difference with first non-orthologous sequence - C.variabilis:121 P.jiroveci:121

E1ZGL7              	100.00%		L0PES4              	100.00%
Bootstrap support for E1ZGL7 as seed ortholog is 100%.
Bootstrap support for L0PES4 as seed ortholog is 100%.

Group of orthologs #757. Best score 120 bits
Score difference with first non-orthologous sequence - C.variabilis:120 P.jiroveci:120

E1ZBQ5              	100.00%		L0PE37              	100.00%
Bootstrap support for E1ZBQ5 as seed ortholog is 100%.
Bootstrap support for L0PE37 as seed ortholog is 100%.

Group of orthologs #758. Best score 120 bits
Score difference with first non-orthologous sequence - C.variabilis:120 P.jiroveci:3

E1ZDK4              	100.00%		L0PD15              	100.00%
Bootstrap support for E1ZDK4 as seed ortholog is 100%.
Bootstrap support for L0PD15 as seed ortholog is 54%.
Alternative seed ortholog is L0P8B4 (3 bits away from this cluster)

Group of orthologs #759. Best score 120 bits
Score difference with first non-orthologous sequence - C.variabilis:120 P.jiroveci:120

E1ZRR3              	100.00%		L0PEK8              	100.00%
Bootstrap support for E1ZRR3 as seed ortholog is 100%.
Bootstrap support for L0PEK8 as seed ortholog is 100%.

Group of orthologs #760. Best score 119 bits
Score difference with first non-orthologous sequence - C.variabilis:119 P.jiroveci:119

E1Z4K8              	100.00%		L0P901              	100.00%
Bootstrap support for E1Z4K8 as seed ortholog is 100%.
Bootstrap support for L0P901 as seed ortholog is 100%.

Group of orthologs #761. Best score 119 bits
Score difference with first non-orthologous sequence - C.variabilis:119 P.jiroveci:119

E1ZA67              	100.00%		L0PAZ1              	100.00%
Bootstrap support for E1ZA67 as seed ortholog is 100%.
Bootstrap support for L0PAZ1 as seed ortholog is 100%.

Group of orthologs #762. Best score 119 bits
Score difference with first non-orthologous sequence - C.variabilis:119 P.jiroveci:119

E1ZGU1              	100.00%		L0P806              	100.00%
Bootstrap support for E1ZGU1 as seed ortholog is 100%.
Bootstrap support for L0P806 as seed ortholog is 100%.

Group of orthologs #763. Best score 119 bits
Score difference with first non-orthologous sequence - C.variabilis:119 P.jiroveci:119

E1ZPY6              	100.00%		L0PE13              	100.00%
Bootstrap support for E1ZPY6 as seed ortholog is 100%.
Bootstrap support for L0PE13 as seed ortholog is 100%.

Group of orthologs #764. Best score 118 bits
Score difference with first non-orthologous sequence - C.variabilis:118 P.jiroveci:118

E1ZF29              	100.00%		L0PDL8              	100.00%
                    	       		L0PD52              	91.60%
Bootstrap support for E1ZF29 as seed ortholog is 100%.
Bootstrap support for L0PDL8 as seed ortholog is 100%.

Group of orthologs #765. Best score 118 bits
Score difference with first non-orthologous sequence - C.variabilis:118 P.jiroveci:118

E1ZAC3              	100.00%		L0P7G9              	100.00%
Bootstrap support for E1ZAC3 as seed ortholog is 100%.
Bootstrap support for L0P7G9 as seed ortholog is 100%.

Group of orthologs #766. Best score 118 bits
Score difference with first non-orthologous sequence - C.variabilis:37 P.jiroveci:118

E1ZJT1              	100.00%		L0PAL8              	100.00%
Bootstrap support for E1ZJT1 as seed ortholog is 96%.
Bootstrap support for L0PAL8 as seed ortholog is 100%.

Group of orthologs #767. Best score 118 bits
Score difference with first non-orthologous sequence - C.variabilis:118 P.jiroveci:118

E1ZLY7              	100.00%		L0P9B3              	100.00%
Bootstrap support for E1ZLY7 as seed ortholog is 100%.
Bootstrap support for L0P9B3 as seed ortholog is 100%.

Group of orthologs #768. Best score 117 bits
Score difference with first non-orthologous sequence - C.variabilis:117 P.jiroveci:68

E1ZH93              	100.00%		L0PCZ0              	100.00%
E1ZS55              	16.82%		
Bootstrap support for E1ZH93 as seed ortholog is 100%.
Bootstrap support for L0PCZ0 as seed ortholog is 99%.

Group of orthologs #769. Best score 117 bits
Score difference with first non-orthologous sequence - C.variabilis:117 P.jiroveci:117

E1ZCY2              	100.00%		L0PD37              	100.00%
Bootstrap support for E1ZCY2 as seed ortholog is 100%.
Bootstrap support for L0PD37 as seed ortholog is 100%.

Group of orthologs #770. Best score 117 bits
Score difference with first non-orthologous sequence - C.variabilis:47 P.jiroveci:21

E1ZKB1              	100.00%		L0P7L3              	100.00%
Bootstrap support for E1ZKB1 as seed ortholog is 95%.
Bootstrap support for L0P7L3 as seed ortholog is 77%.

Group of orthologs #771. Best score 117 bits
Score difference with first non-orthologous sequence - C.variabilis:117 P.jiroveci:117

E1ZMN5              	100.00%		L0PCZ5              	100.00%
Bootstrap support for E1ZMN5 as seed ortholog is 100%.
Bootstrap support for L0PCZ5 as seed ortholog is 100%.

Group of orthologs #772. Best score 117 bits
Score difference with first non-orthologous sequence - C.variabilis:117 P.jiroveci:117

E1ZLP7              	100.00%		L0PFQ7              	100.00%
Bootstrap support for E1ZLP7 as seed ortholog is 100%.
Bootstrap support for L0PFQ7 as seed ortholog is 100%.

Group of orthologs #773. Best score 117 bits
Score difference with first non-orthologous sequence - C.variabilis:41 P.jiroveci:24

E1ZPX3              	100.00%		L0PH42              	100.00%
Bootstrap support for E1ZPX3 as seed ortholog is 83%.
Bootstrap support for L0PH42 as seed ortholog is 69%.
Alternative seed ortholog is L0PCQ6 (24 bits away from this cluster)

Group of orthologs #774. Best score 116 bits
Score difference with first non-orthologous sequence - C.variabilis:116 P.jiroveci:116

E1ZTG9              	100.00%		L0P7T6              	100.00%
                    	       		L0PF25              	100.00%
Bootstrap support for E1ZTG9 as seed ortholog is 100%.
Bootstrap support for L0P7T6 as seed ortholog is 100%.
Bootstrap support for L0PF25 as seed ortholog is 100%.

Group of orthologs #775. Best score 116 bits
Score difference with first non-orthologous sequence - C.variabilis:116 P.jiroveci:67

E1ZA78              	100.00%		L0P938              	100.00%
Bootstrap support for E1ZA78 as seed ortholog is 100%.
Bootstrap support for L0P938 as seed ortholog is 99%.

Group of orthologs #776. Best score 116 bits
Score difference with first non-orthologous sequence - C.variabilis:116 P.jiroveci:116

E1ZAE0              	100.00%		L0PG13              	100.00%
Bootstrap support for E1ZAE0 as seed ortholog is 100%.
Bootstrap support for L0PG13 as seed ortholog is 100%.

Group of orthologs #777. Best score 116 bits
Score difference with first non-orthologous sequence - C.variabilis:116 P.jiroveci:62

E1ZKB0              	100.00%		L0PA97              	100.00%
Bootstrap support for E1ZKB0 as seed ortholog is 100%.
Bootstrap support for L0PA97 as seed ortholog is 99%.

Group of orthologs #778. Best score 116 bits
Score difference with first non-orthologous sequence - C.variabilis:116 P.jiroveci:116

E1ZTM9              	100.00%		L0PD00              	100.00%
Bootstrap support for E1ZTM9 as seed ortholog is 100%.
Bootstrap support for L0PD00 as seed ortholog is 100%.

Group of orthologs #779. Best score 115 bits
Score difference with first non-orthologous sequence - C.variabilis:115 P.jiroveci:49

E1Z9V8              	100.00%		L0PBH0              	100.00%
                    	       		L0PGS5              	46.41%
Bootstrap support for E1Z9V8 as seed ortholog is 100%.
Bootstrap support for L0PBH0 as seed ortholog is 96%.

Group of orthologs #780. Best score 115 bits
Score difference with first non-orthologous sequence - C.variabilis:115 P.jiroveci:115

E1Z9Q1              	100.00%		L0P9E5              	100.00%
Bootstrap support for E1Z9Q1 as seed ortholog is 100%.
Bootstrap support for L0P9E5 as seed ortholog is 100%.

Group of orthologs #781. Best score 114 bits
Score difference with first non-orthologous sequence - C.variabilis:114 P.jiroveci:114

E1Z6W6              	100.00%		L0P8Z4              	100.00%
Bootstrap support for E1Z6W6 as seed ortholog is 100%.
Bootstrap support for L0P8Z4 as seed ortholog is 100%.

Group of orthologs #782. Best score 114 bits
Score difference with first non-orthologous sequence - C.variabilis:114 P.jiroveci:114

E1ZIT7              	100.00%		L0P9A1              	100.00%
Bootstrap support for E1ZIT7 as seed ortholog is 100%.
Bootstrap support for L0P9A1 as seed ortholog is 100%.

Group of orthologs #783. Best score 114 bits
Score difference with first non-orthologous sequence - C.variabilis:114 P.jiroveci:114

E1ZLZ5              	100.00%		L0P838              	100.00%
Bootstrap support for E1ZLZ5 as seed ortholog is 100%.
Bootstrap support for L0P838 as seed ortholog is 100%.

Group of orthologs #784. Best score 113 bits
Score difference with first non-orthologous sequence - C.variabilis:113 P.jiroveci:113

E1ZTG1              	100.00%		L0P7S0              	100.00%
Bootstrap support for E1ZTG1 as seed ortholog is 100%.
Bootstrap support for L0P7S0 as seed ortholog is 100%.

Group of orthologs #785. Best score 112 bits
Score difference with first non-orthologous sequence - C.variabilis:112 P.jiroveci:112

E1ZKR5              	100.00%		L0P7T7              	100.00%
Bootstrap support for E1ZKR5 as seed ortholog is 100%.
Bootstrap support for L0P7T7 as seed ortholog is 100%.

Group of orthologs #786. Best score 111 bits
Score difference with first non-orthologous sequence - C.variabilis:63 P.jiroveci:111

E1Z2G9              	100.00%		L0PAA3              	100.00%
Bootstrap support for E1Z2G9 as seed ortholog is 96%.
Bootstrap support for L0PAA3 as seed ortholog is 100%.

Group of orthologs #787. Best score 111 bits
Score difference with first non-orthologous sequence - C.variabilis:111 P.jiroveci:111

E1ZMW9              	100.00%		L0P9A7              	100.00%
Bootstrap support for E1ZMW9 as seed ortholog is 100%.
Bootstrap support for L0P9A7 as seed ortholog is 100%.

Group of orthologs #788. Best score 110 bits
Score difference with first non-orthologous sequence - C.variabilis:110 P.jiroveci:110

E1Z8E3              	100.00%		L0P8J6              	100.00%
Bootstrap support for E1Z8E3 as seed ortholog is 100%.
Bootstrap support for L0P8J6 as seed ortholog is 100%.

Group of orthologs #789. Best score 110 bits
Score difference with first non-orthologous sequence - C.variabilis:45 P.jiroveci:110

E1Z993              	100.00%		L0P8K4              	100.00%
Bootstrap support for E1Z993 as seed ortholog is 97%.
Bootstrap support for L0P8K4 as seed ortholog is 100%.

Group of orthologs #790. Best score 110 bits
Score difference with first non-orthologous sequence - C.variabilis:110 P.jiroveci:110

E1Z4F5              	100.00%		L0PGC9              	100.00%
Bootstrap support for E1Z4F5 as seed ortholog is 100%.
Bootstrap support for L0PGC9 as seed ortholog is 100%.

Group of orthologs #791. Best score 110 bits
Score difference with first non-orthologous sequence - C.variabilis:110 P.jiroveci:110

E1Z3H5              	100.00%		L0PIT4              	100.00%
Bootstrap support for E1Z3H5 as seed ortholog is 100%.
Bootstrap support for L0PIT4 as seed ortholog is 100%.

Group of orthologs #792. Best score 110 bits
Score difference with first non-orthologous sequence - C.variabilis:110 P.jiroveci:110

E1Z6L3              	100.00%		L0PFD1              	100.00%
Bootstrap support for E1Z6L3 as seed ortholog is 100%.
Bootstrap support for L0PFD1 as seed ortholog is 100%.

Group of orthologs #793. Best score 110 bits
Score difference with first non-orthologous sequence - C.variabilis:58 P.jiroveci:54

E1ZDC9              	100.00%		L0PD19              	100.00%
Bootstrap support for E1ZDC9 as seed ortholog is 99%.
Bootstrap support for L0PD19 as seed ortholog is 99%.

Group of orthologs #794. Best score 109 bits
Score difference with first non-orthologous sequence - C.variabilis:109 P.jiroveci:109

E1Z8L6              	100.00%		L0PH83              	100.00%
Bootstrap support for E1Z8L6 as seed ortholog is 100%.
Bootstrap support for L0PH83 as seed ortholog is 100%.

Group of orthologs #795. Best score 109 bits
Score difference with first non-orthologous sequence - C.variabilis:109 P.jiroveci:109

E1ZGC4              	100.00%		L0PFT5              	100.00%
Bootstrap support for E1ZGC4 as seed ortholog is 100%.
Bootstrap support for L0PFT5 as seed ortholog is 100%.

Group of orthologs #796. Best score 109 bits
Score difference with first non-orthologous sequence - C.variabilis:23 P.jiroveci:50

E1ZQN3              	100.00%		L0PDE1              	100.00%
Bootstrap support for E1ZQN3 as seed ortholog is 74%.
Alternative seed ortholog is E1ZES3 (23 bits away from this cluster)
Bootstrap support for L0PDE1 as seed ortholog is 92%.

Group of orthologs #797. Best score 108 bits
Score difference with first non-orthologous sequence - C.variabilis:108 P.jiroveci:108

E1ZFT2              	100.00%		L0PEH7              	100.00%
E1ZKG9              	7.28%		
Bootstrap support for E1ZFT2 as seed ortholog is 100%.
Bootstrap support for L0PEH7 as seed ortholog is 100%.

Group of orthologs #798. Best score 108 bits
Score difference with first non-orthologous sequence - C.variabilis:108 P.jiroveci:108

E1ZBG4              	100.00%		L0P7U6              	100.00%
Bootstrap support for E1ZBG4 as seed ortholog is 100%.
Bootstrap support for L0P7U6 as seed ortholog is 100%.

Group of orthologs #799. Best score 107 bits
Score difference with first non-orthologous sequence - C.variabilis:107 P.jiroveci:107

E1ZR42              	100.00%		L0PAX8              	100.00%
                    	       		L0PB70              	23.52%
                    	       		L0PAI9              	19.63%
                    	       		L0PCM1              	16.36%
Bootstrap support for E1ZR42 as seed ortholog is 100%.
Bootstrap support for L0PAX8 as seed ortholog is 100%.

Group of orthologs #800. Best score 107 bits
Score difference with first non-orthologous sequence - C.variabilis:46 P.jiroveci:107

E1Z6J8              	100.00%		L0PA67              	100.00%
Bootstrap support for E1Z6J8 as seed ortholog is 91%.
Bootstrap support for L0PA67 as seed ortholog is 100%.

Group of orthologs #801. Best score 107 bits
Score difference with first non-orthologous sequence - C.variabilis:107 P.jiroveci:107

E1ZCR4              	100.00%		L0PGJ5              	100.00%
Bootstrap support for E1ZCR4 as seed ortholog is 100%.
Bootstrap support for L0PGJ5 as seed ortholog is 100%.

Group of orthologs #802. Best score 107 bits
Score difference with first non-orthologous sequence - C.variabilis:107 P.jiroveci:28

E1ZFT4              	100.00%		L0PFG2              	100.00%
Bootstrap support for E1ZFT4 as seed ortholog is 100%.
Bootstrap support for L0PFG2 as seed ortholog is 84%.

Group of orthologs #803. Best score 106 bits
Score difference with first non-orthologous sequence - C.variabilis:106 P.jiroveci:106

E1Z861              	100.00%		L0P8G0              	100.00%
Bootstrap support for E1Z861 as seed ortholog is 100%.
Bootstrap support for L0P8G0 as seed ortholog is 100%.

Group of orthologs #804. Best score 106 bits
Score difference with first non-orthologous sequence - C.variabilis:106 P.jiroveci:106

E1ZAY3              	100.00%		L0PBR1              	100.00%
Bootstrap support for E1ZAY3 as seed ortholog is 100%.
Bootstrap support for L0PBR1 as seed ortholog is 100%.

Group of orthologs #805. Best score 106 bits
Score difference with first non-orthologous sequence - C.variabilis:106 P.jiroveci:106

E1ZFC9              	100.00%		L0PEP9              	100.00%
Bootstrap support for E1ZFC9 as seed ortholog is 100%.
Bootstrap support for L0PEP9 as seed ortholog is 100%.

Group of orthologs #806. Best score 106 bits
Score difference with first non-orthologous sequence - C.variabilis:106 P.jiroveci:106

E1ZJ06              	100.00%		L0PCH0              	100.00%
Bootstrap support for E1ZJ06 as seed ortholog is 100%.
Bootstrap support for L0PCH0 as seed ortholog is 100%.

Group of orthologs #807. Best score 106 bits
Score difference with first non-orthologous sequence - C.variabilis:106 P.jiroveci:51

E1ZQD9              	100.00%		L0PCY2              	100.00%
Bootstrap support for E1ZQD9 as seed ortholog is 100%.
Bootstrap support for L0PCY2 as seed ortholog is 78%.

Group of orthologs #808. Best score 105 bits
Score difference with first non-orthologous sequence - C.variabilis:105 P.jiroveci:105

E1ZH07              	100.00%		L0P9E1              	100.00%
Bootstrap support for E1ZH07 as seed ortholog is 100%.
Bootstrap support for L0P9E1 as seed ortholog is 100%.

Group of orthologs #809. Best score 105 bits
Score difference with first non-orthologous sequence - C.variabilis:105 P.jiroveci:105

E1ZJ67              	100.00%		L0P8G7              	100.00%
Bootstrap support for E1ZJ67 as seed ortholog is 100%.
Bootstrap support for L0P8G7 as seed ortholog is 100%.

Group of orthologs #810. Best score 105 bits
Score difference with first non-orthologous sequence - C.variabilis:105 P.jiroveci:105

E1ZST2              	100.00%		L0PBK2              	100.00%
Bootstrap support for E1ZST2 as seed ortholog is 100%.
Bootstrap support for L0PBK2 as seed ortholog is 100%.

Group of orthologs #811. Best score 105 bits
Score difference with first non-orthologous sequence - C.variabilis:105 P.jiroveci:105

E1ZP58              	100.00%		L0PFV2              	100.00%
Bootstrap support for E1ZP58 as seed ortholog is 100%.
Bootstrap support for L0PFV2 as seed ortholog is 100%.

Group of orthologs #812. Best score 105 bits
Score difference with first non-orthologous sequence - C.variabilis:105 P.jiroveci:105

E1ZTU3              	100.00%		L0PFP3              	100.00%
Bootstrap support for E1ZTU3 as seed ortholog is 100%.
Bootstrap support for L0PFP3 as seed ortholog is 100%.

Group of orthologs #813. Best score 104 bits
Score difference with first non-orthologous sequence - C.variabilis:104 P.jiroveci:104

E1Z5L3              	100.00%		L0PFP4              	100.00%
E1Z7T2              	16.36%		
E1Z8B1              	15.64%		
E1ZNH2              	15.64%		
E1ZR55              	14.92%		
Bootstrap support for E1Z5L3 as seed ortholog is 100%.
Bootstrap support for L0PFP4 as seed ortholog is 100%.

Group of orthologs #814. Best score 104 bits
Score difference with first non-orthologous sequence - C.variabilis:104 P.jiroveci:104

E1Z6Q4              	100.00%		L0PBK0              	100.00%
Bootstrap support for E1Z6Q4 as seed ortholog is 100%.
Bootstrap support for L0PBK0 as seed ortholog is 100%.

Group of orthologs #815. Best score 104 bits
Score difference with first non-orthologous sequence - C.variabilis:104 P.jiroveci:104

E1Z7C4              	100.00%		L0PFR9              	100.00%
Bootstrap support for E1Z7C4 as seed ortholog is 100%.
Bootstrap support for L0PFR9 as seed ortholog is 100%.

Group of orthologs #816. Best score 104 bits
Score difference with first non-orthologous sequence - C.variabilis:104 P.jiroveci:104

E1Z8E2              	100.00%		L0PFC4              	100.00%
Bootstrap support for E1Z8E2 as seed ortholog is 100%.
Bootstrap support for L0PFC4 as seed ortholog is 100%.

Group of orthologs #817. Best score 104 bits
Score difference with first non-orthologous sequence - C.variabilis:104 P.jiroveci:104

E1ZKZ7              	100.00%		L0PAS5              	100.00%
Bootstrap support for E1ZKZ7 as seed ortholog is 100%.
Bootstrap support for L0PAS5 as seed ortholog is 100%.

Group of orthologs #818. Best score 104 bits
Score difference with first non-orthologous sequence - C.variabilis:58 P.jiroveci:104

E1ZJP3              	100.00%		L0PEJ9              	100.00%
Bootstrap support for E1ZJP3 as seed ortholog is 96%.
Bootstrap support for L0PEJ9 as seed ortholog is 100%.

Group of orthologs #819. Best score 103 bits
Score difference with first non-orthologous sequence - C.variabilis:2 P.jiroveci:103

E1Z1W0              	100.00%		L0PDS6              	100.00%
Bootstrap support for E1Z1W0 as seed ortholog is 57%.
Alternative seed ortholog is E1ZPV9 (2 bits away from this cluster)
Bootstrap support for L0PDS6 as seed ortholog is 100%.

Group of orthologs #820. Best score 103 bits
Score difference with first non-orthologous sequence - C.variabilis:103 P.jiroveci:103

E1Z755              	100.00%		L0P940              	100.00%
Bootstrap support for E1Z755 as seed ortholog is 100%.
Bootstrap support for L0P940 as seed ortholog is 100%.

Group of orthologs #821. Best score 103 bits
Score difference with first non-orthologous sequence - C.variabilis:49 P.jiroveci:103

E1Z6T8              	100.00%		L0PAS9              	100.00%
Bootstrap support for E1Z6T8 as seed ortholog is 99%.
Bootstrap support for L0PAS9 as seed ortholog is 100%.

Group of orthologs #822. Best score 103 bits
Score difference with first non-orthologous sequence - C.variabilis:103 P.jiroveci:103

E1Z8E7              	100.00%		L0PCP0              	100.00%
Bootstrap support for E1Z8E7 as seed ortholog is 100%.
Bootstrap support for L0PCP0 as seed ortholog is 100%.

Group of orthologs #823. Best score 103 bits
Score difference with first non-orthologous sequence - C.variabilis:103 P.jiroveci:103

E1Z693              	100.00%		L0PFX9              	100.00%
Bootstrap support for E1Z693 as seed ortholog is 100%.
Bootstrap support for L0PFX9 as seed ortholog is 100%.

Group of orthologs #824. Best score 103 bits
Score difference with first non-orthologous sequence - C.variabilis:103 P.jiroveci:103

E1ZGU7              	100.00%		L0PCI9              	100.00%
Bootstrap support for E1ZGU7 as seed ortholog is 100%.
Bootstrap support for L0PCI9 as seed ortholog is 100%.

Group of orthologs #825. Best score 102 bits
Score difference with first non-orthologous sequence - C.variabilis:102 P.jiroveci:102

E1Z788              	100.00%		L0P7A1              	100.00%
Bootstrap support for E1Z788 as seed ortholog is 100%.
Bootstrap support for L0P7A1 as seed ortholog is 100%.

Group of orthologs #826. Best score 102 bits
Score difference with first non-orthologous sequence - C.variabilis:102 P.jiroveci:102

E1Z5D1              	100.00%		L0PA83              	100.00%
Bootstrap support for E1Z5D1 as seed ortholog is 100%.
Bootstrap support for L0PA83 as seed ortholog is 100%.

Group of orthologs #827. Best score 102 bits
Score difference with first non-orthologous sequence - C.variabilis:102 P.jiroveci:102

E1Z6G0              	100.00%		L0PCY1              	100.00%
Bootstrap support for E1Z6G0 as seed ortholog is 100%.
Bootstrap support for L0PCY1 as seed ortholog is 100%.

Group of orthologs #828. Best score 102 bits
Score difference with first non-orthologous sequence - C.variabilis:102 P.jiroveci:102

E1ZBM6              	100.00%		L0PD60              	100.00%
Bootstrap support for E1ZBM6 as seed ortholog is 100%.
Bootstrap support for L0PD60 as seed ortholog is 100%.

Group of orthologs #829. Best score 102 bits
Score difference with first non-orthologous sequence - C.variabilis:102 P.jiroveci:102

E1ZDV7              	100.00%		L0PBL2              	100.00%
Bootstrap support for E1ZDV7 as seed ortholog is 100%.
Bootstrap support for L0PBL2 as seed ortholog is 100%.

Group of orthologs #830. Best score 102 bits
Score difference with first non-orthologous sequence - C.variabilis:53 P.jiroveci:102

E1ZBI8              	100.00%		L0PED2              	100.00%
Bootstrap support for E1ZBI8 as seed ortholog is 86%.
Bootstrap support for L0PED2 as seed ortholog is 100%.

Group of orthologs #831. Best score 102 bits
Score difference with first non-orthologous sequence - C.variabilis:102 P.jiroveci:102

E1ZRW3              	100.00%		L0PCU6              	100.00%
Bootstrap support for E1ZRW3 as seed ortholog is 100%.
Bootstrap support for L0PCU6 as seed ortholog is 100%.

Group of orthologs #832. Best score 101 bits
Score difference with first non-orthologous sequence - C.variabilis:101 P.jiroveci:101

E1Z7Y5              	100.00%		L0PA21              	100.00%
Bootstrap support for E1Z7Y5 as seed ortholog is 100%.
Bootstrap support for L0PA21 as seed ortholog is 100%.

Group of orthologs #833. Best score 101 bits
Score difference with first non-orthologous sequence - C.variabilis:101 P.jiroveci:101

E1ZB65              	100.00%		L0P8W1              	100.00%
Bootstrap support for E1ZB65 as seed ortholog is 100%.
Bootstrap support for L0P8W1 as seed ortholog is 100%.

Group of orthologs #834. Best score 101 bits
Score difference with first non-orthologous sequence - C.variabilis:52 P.jiroveci:101

E1ZAL6              	100.00%		L0P9W5              	100.00%
Bootstrap support for E1ZAL6 as seed ortholog is 97%.
Bootstrap support for L0P9W5 as seed ortholog is 100%.

Group of orthologs #835. Best score 101 bits
Score difference with first non-orthologous sequence - C.variabilis:101 P.jiroveci:101

E1ZDL6              	100.00%		L0P9P5              	100.00%
Bootstrap support for E1ZDL6 as seed ortholog is 100%.
Bootstrap support for L0P9P5 as seed ortholog is 100%.

Group of orthologs #836. Best score 101 bits
Score difference with first non-orthologous sequence - C.variabilis:101 P.jiroveci:101

E1ZCS4              	100.00%		L0PD24              	100.00%
Bootstrap support for E1ZCS4 as seed ortholog is 100%.
Bootstrap support for L0PD24 as seed ortholog is 100%.

Group of orthologs #837. Best score 101 bits
Score difference with first non-orthologous sequence - C.variabilis:101 P.jiroveci:101

E1ZST9              	100.00%		L0PAB2              	100.00%
Bootstrap support for E1ZST9 as seed ortholog is 100%.
Bootstrap support for L0PAB2 as seed ortholog is 100%.

Group of orthologs #838. Best score 101 bits
Score difference with first non-orthologous sequence - C.variabilis:43 P.jiroveci:101

F2YGQ5              	100.00%		L0PFQ6              	100.00%
Bootstrap support for F2YGQ5 as seed ortholog is 91%.
Bootstrap support for L0PFQ6 as seed ortholog is 100%.

Group of orthologs #839. Best score 100 bits
Score difference with first non-orthologous sequence - C.variabilis:100 P.jiroveci:100

E1ZJG0              	100.00%		L0P9Z6              	100.00%
Bootstrap support for E1ZJG0 as seed ortholog is 100%.
Bootstrap support for L0P9Z6 as seed ortholog is 100%.

Group of orthologs #840. Best score 100 bits
Score difference with first non-orthologous sequence - C.variabilis:100 P.jiroveci:100

F2YGN8              	100.00%		L0PBK3              	100.00%
Bootstrap support for F2YGN8 as seed ortholog is 100%.
Bootstrap support for L0PBK3 as seed ortholog is 100%.

Group of orthologs #841. Best score 99 bits
Score difference with first non-orthologous sequence - C.variabilis:99 P.jiroveci:99

E1Z4E0              	100.00%		L0P9C4              	100.00%
Bootstrap support for E1Z4E0 as seed ortholog is 100%.
Bootstrap support for L0P9C4 as seed ortholog is 100%.

Group of orthologs #842. Best score 99 bits
Score difference with first non-orthologous sequence - C.variabilis:99 P.jiroveci:99

E1ZAT9              	100.00%		L0P6X4              	100.00%
Bootstrap support for E1ZAT9 as seed ortholog is 100%.
Bootstrap support for L0P6X4 as seed ortholog is 100%.

Group of orthologs #843. Best score 99 bits
Score difference with first non-orthologous sequence - C.variabilis:99 P.jiroveci:99

E1Z9Z9              	100.00%		L0PE76              	100.00%
Bootstrap support for E1Z9Z9 as seed ortholog is 100%.
Bootstrap support for L0PE76 as seed ortholog is 100%.

Group of orthologs #844. Best score 99 bits
Score difference with first non-orthologous sequence - C.variabilis:99 P.jiroveci:99

E1ZJA0              	100.00%		L0PCZ2              	100.00%
Bootstrap support for E1ZJA0 as seed ortholog is 100%.
Bootstrap support for L0PCZ2 as seed ortholog is 100%.

Group of orthologs #845. Best score 98 bits
Score difference with first non-orthologous sequence - C.variabilis:53 P.jiroveci:98

E1ZEC5              	100.00%		L0P9S9              	100.00%
E1Z6A6              	25.71%		
E1ZNL8              	22.88%		
E1Z268              	14.32%		
Bootstrap support for E1ZEC5 as seed ortholog is 83%.
Bootstrap support for L0P9S9 as seed ortholog is 100%.

Group of orthologs #846. Best score 98 bits
Score difference with first non-orthologous sequence - C.variabilis:98 P.jiroveci:98

E1ZKG7              	100.00%		L0PFS7              	100.00%
Bootstrap support for E1ZKG7 as seed ortholog is 100%.
Bootstrap support for L0PFS7 as seed ortholog is 100%.

Group of orthologs #847. Best score 97 bits
Score difference with first non-orthologous sequence - C.variabilis:23 P.jiroveci:48

E1ZFR4              	100.00%		L0P903              	100.00%
E1Z9R5              	11.63%		
E1Z3W4              	5.92%		
Bootstrap support for E1ZFR4 as seed ortholog is 74%.
Alternative seed ortholog is E1ZL79 (23 bits away from this cluster)
Bootstrap support for L0P903 as seed ortholog is 94%.

Group of orthologs #848. Best score 97 bits
Score difference with first non-orthologous sequence - C.variabilis:97 P.jiroveci:97

E1Z9Z4              	100.00%		L0P997              	100.00%
Bootstrap support for E1Z9Z4 as seed ortholog is 100%.
Bootstrap support for L0P997 as seed ortholog is 100%.

Group of orthologs #849. Best score 97 bits
Score difference with first non-orthologous sequence - C.variabilis:97 P.jiroveci:97

E1Z4D5              	100.00%		L0PFM0              	100.00%
Bootstrap support for E1Z4D5 as seed ortholog is 100%.
Bootstrap support for L0PFM0 as seed ortholog is 100%.

Group of orthologs #850. Best score 97 bits
Score difference with first non-orthologous sequence - C.variabilis:97 P.jiroveci:97

E1ZD73              	100.00%		L0P6S2              	100.00%
Bootstrap support for E1ZD73 as seed ortholog is 100%.
Bootstrap support for L0P6S2 as seed ortholog is 100%.

Group of orthologs #851. Best score 97 bits
Score difference with first non-orthologous sequence - C.variabilis:43 P.jiroveci:97

E1ZEQ8              	100.00%		L0PFA1              	100.00%
Bootstrap support for E1ZEQ8 as seed ortholog is 99%.
Bootstrap support for L0PFA1 as seed ortholog is 100%.

Group of orthologs #852. Best score 97 bits
Score difference with first non-orthologous sequence - C.variabilis:97 P.jiroveci:97

E1ZH27              	100.00%		L0PD90              	100.00%
Bootstrap support for E1ZH27 as seed ortholog is 100%.
Bootstrap support for L0PD90 as seed ortholog is 100%.

Group of orthologs #853. Best score 97 bits
Score difference with first non-orthologous sequence - C.variabilis:2 P.jiroveci:97

E1ZQG3              	100.00%		L0PFV4              	100.00%
Bootstrap support for E1ZQG3 as seed ortholog is 53%.
Alternative seed ortholog is E1ZQ74 (2 bits away from this cluster)
Bootstrap support for L0PFV4 as seed ortholog is 100%.

Group of orthologs #854. Best score 96 bits
Score difference with first non-orthologous sequence - C.variabilis:96 P.jiroveci:96

E1ZCG1              	100.00%		L0P939              	100.00%
                    	       		L0PFG4              	89.04%
Bootstrap support for E1ZCG1 as seed ortholog is 100%.
Bootstrap support for L0P939 as seed ortholog is 100%.

Group of orthologs #855. Best score 96 bits
Score difference with first non-orthologous sequence - C.variabilis:96 P.jiroveci:96

E1ZR26              	100.00%		L0PFA3              	100.00%
E1ZR25              	32.39%		
Bootstrap support for E1ZR26 as seed ortholog is 100%.
Bootstrap support for L0PFA3 as seed ortholog is 100%.

Group of orthologs #856. Best score 96 bits
Score difference with first non-orthologous sequence - C.variabilis:96 P.jiroveci:96

E1Z6R5              	100.00%		L0PDG4              	100.00%
Bootstrap support for E1Z6R5 as seed ortholog is 100%.
Bootstrap support for L0PDG4 as seed ortholog is 100%.

Group of orthologs #857. Best score 96 bits
Score difference with first non-orthologous sequence - C.variabilis:96 P.jiroveci:96

E1Z5H8              	100.00%		L0PG28              	100.00%
Bootstrap support for E1Z5H8 as seed ortholog is 100%.
Bootstrap support for L0PG28 as seed ortholog is 100%.

Group of orthologs #858. Best score 96 bits
Score difference with first non-orthologous sequence - C.variabilis:96 P.jiroveci:96

E1ZE96              	100.00%		L0P8S1              	100.00%
Bootstrap support for E1ZE96 as seed ortholog is 100%.
Bootstrap support for L0P8S1 as seed ortholog is 100%.

Group of orthologs #859. Best score 96 bits
Score difference with first non-orthologous sequence - C.variabilis:96 P.jiroveci:96

E1ZJ68              	100.00%		L0P7E6              	100.00%
Bootstrap support for E1ZJ68 as seed ortholog is 100%.
Bootstrap support for L0P7E6 as seed ortholog is 100%.

Group of orthologs #860. Best score 96 bits
Score difference with first non-orthologous sequence - C.variabilis:96 P.jiroveci:96

E1ZKS4              	100.00%		L0P8C9              	100.00%
Bootstrap support for E1ZKS4 as seed ortholog is 100%.
Bootstrap support for L0P8C9 as seed ortholog is 100%.

Group of orthologs #861. Best score 95 bits
Score difference with first non-orthologous sequence - C.variabilis:95 P.jiroveci:95

E1Z286              	100.00%		L0PB34              	100.00%
Bootstrap support for E1Z286 as seed ortholog is 100%.
Bootstrap support for L0PB34 as seed ortholog is 100%.

Group of orthologs #862. Best score 95 bits
Score difference with first non-orthologous sequence - C.variabilis:95 P.jiroveci:95

E1Z8W8              	100.00%		L0P9Q9              	100.00%
Bootstrap support for E1Z8W8 as seed ortholog is 100%.
Bootstrap support for L0P9Q9 as seed ortholog is 100%.

Group of orthologs #863. Best score 95 bits
Score difference with first non-orthologous sequence - C.variabilis:95 P.jiroveci:95

E1ZAW7              	100.00%		L0PFP9              	100.00%
Bootstrap support for E1ZAW7 as seed ortholog is 100%.
Bootstrap support for L0PFP9 as seed ortholog is 100%.

Group of orthologs #864. Best score 95 bits
Score difference with first non-orthologous sequence - C.variabilis:95 P.jiroveci:95

E1ZMG9              	100.00%		L0PG56              	100.00%
Bootstrap support for E1ZMG9 as seed ortholog is 100%.
Bootstrap support for L0PG56 as seed ortholog is 100%.

Group of orthologs #865. Best score 95 bits
Score difference with first non-orthologous sequence - C.variabilis:95 P.jiroveci:95

E1ZUB2              	100.00%		L0PGR9              	100.00%
Bootstrap support for E1ZUB2 as seed ortholog is 100%.
Bootstrap support for L0PGR9 as seed ortholog is 100%.

Group of orthologs #866. Best score 94 bits
Score difference with first non-orthologous sequence - C.variabilis:42 P.jiroveci:25

E1Z3J0              	100.00%		L0P7B2              	100.00%
                    	       		L0P9D3              	99.06%
Bootstrap support for E1Z3J0 as seed ortholog is 88%.
Bootstrap support for L0P7B2 as seed ortholog is 74%.
Alternative seed ortholog is L0P7Z7 (25 bits away from this cluster)

Group of orthologs #867. Best score 94 bits
Score difference with first non-orthologous sequence - C.variabilis:94 P.jiroveci:94

E1Z1Z4              	100.00%		L0PBH3              	100.00%
E1ZHS9              	28.81%		
Bootstrap support for E1Z1Z4 as seed ortholog is 100%.
Bootstrap support for L0PBH3 as seed ortholog is 100%.

Group of orthologs #868. Best score 94 bits
Score difference with first non-orthologous sequence - C.variabilis:94 P.jiroveci:94

E1Z3X2              	100.00%		L0PE48              	100.00%
Bootstrap support for E1Z3X2 as seed ortholog is 100%.
Bootstrap support for L0PE48 as seed ortholog is 100%.

Group of orthologs #869. Best score 94 bits
Score difference with first non-orthologous sequence - C.variabilis:94 P.jiroveci:94

E1ZAB7              	100.00%		L0P9D1              	100.00%
Bootstrap support for E1ZAB7 as seed ortholog is 100%.
Bootstrap support for L0P9D1 as seed ortholog is 100%.

Group of orthologs #870. Best score 94 bits
Score difference with first non-orthologous sequence - C.variabilis:94 P.jiroveci:94

E1ZUF7              	100.00%		L0PEW5              	100.00%
Bootstrap support for E1ZUF7 as seed ortholog is 100%.
Bootstrap support for L0PEW5 as seed ortholog is 100%.

Group of orthologs #871. Best score 93 bits
Score difference with first non-orthologous sequence - C.variabilis:93 P.jiroveci:93

E1ZTG3              	100.00%		L0P8Z0              	100.00%
                    	       		L0PC60              	96.97%
Bootstrap support for E1ZTG3 as seed ortholog is 100%.
Bootstrap support for L0P8Z0 as seed ortholog is 100%.

Group of orthologs #872. Best score 93 bits
Score difference with first non-orthologous sequence - C.variabilis:12 P.jiroveci:93

E1Z709              	100.00%		L0PDS8              	100.00%
Bootstrap support for E1Z709 as seed ortholog is 28%.
Alternative seed ortholog is E1ZDQ5 (12 bits away from this cluster)
Bootstrap support for L0PDS8 as seed ortholog is 100%.

Group of orthologs #873. Best score 93 bits
Score difference with first non-orthologous sequence - C.variabilis:93 P.jiroveci:93

E1Z5K5              	100.00%		L0PFP7              	100.00%
Bootstrap support for E1Z5K5 as seed ortholog is 100%.
Bootstrap support for L0PFP7 as seed ortholog is 100%.

Group of orthologs #874. Best score 93 bits
Score difference with first non-orthologous sequence - C.variabilis:93 P.jiroveci:93

E1ZDX4              	100.00%		L0PAT4              	100.00%
Bootstrap support for E1ZDX4 as seed ortholog is 100%.
Bootstrap support for L0PAT4 as seed ortholog is 100%.

Group of orthologs #875. Best score 93 bits
Score difference with first non-orthologous sequence - C.variabilis:93 P.jiroveci:93

E1ZGD5              	100.00%		L0PD33              	100.00%
Bootstrap support for E1ZGD5 as seed ortholog is 100%.
Bootstrap support for L0PD33 as seed ortholog is 100%.

Group of orthologs #876. Best score 93 bits
Score difference with first non-orthologous sequence - C.variabilis:93 P.jiroveci:93

E1ZMF4              	100.00%		L0PAW5              	100.00%
Bootstrap support for E1ZMF4 as seed ortholog is 100%.
Bootstrap support for L0PAW5 as seed ortholog is 100%.

Group of orthologs #877. Best score 93 bits
Score difference with first non-orthologous sequence - C.variabilis:93 P.jiroveci:93

E1ZMR8              	100.00%		L0PFB0              	100.00%
Bootstrap support for E1ZMR8 as seed ortholog is 100%.
Bootstrap support for L0PFB0 as seed ortholog is 100%.

Group of orthologs #878. Best score 92 bits
Score difference with first non-orthologous sequence - C.variabilis:92 P.jiroveci:92

E1ZLM1              	100.00%		L0P982              	100.00%
E1ZPZ5              	18.20%		
E1ZTY7              	10.48%		
E1ZCD9              	5.70%		
E1ZSE1              	5.15%		
Bootstrap support for E1ZLM1 as seed ortholog is 100%.
Bootstrap support for L0P982 as seed ortholog is 100%.

Group of orthologs #879. Best score 92 bits
Score difference with first non-orthologous sequence - C.variabilis:44 P.jiroveci:92

E1Z3J2              	100.00%		L0PD96              	100.00%
Bootstrap support for E1Z3J2 as seed ortholog is 98%.
Bootstrap support for L0PD96 as seed ortholog is 100%.

Group of orthologs #880. Best score 92 bits
Score difference with first non-orthologous sequence - C.variabilis:38 P.jiroveci:92

E1Z9T9              	100.00%		L0P724              	100.00%
Bootstrap support for E1Z9T9 as seed ortholog is 97%.
Bootstrap support for L0P724 as seed ortholog is 100%.

Group of orthologs #881. Best score 92 bits
Score difference with first non-orthologous sequence - C.variabilis:92 P.jiroveci:92

E1ZKW3              	100.00%		L0PCE5              	100.00%
Bootstrap support for E1ZKW3 as seed ortholog is 100%.
Bootstrap support for L0PCE5 as seed ortholog is 100%.

Group of orthologs #882. Best score 92 bits
Score difference with first non-orthologous sequence - C.variabilis:92 P.jiroveci:92

E1ZMY3              	100.00%		L0PC68              	100.00%
Bootstrap support for E1ZMY3 as seed ortholog is 100%.
Bootstrap support for L0PC68 as seed ortholog is 100%.

Group of orthologs #883. Best score 92 bits
Score difference with first non-orthologous sequence - C.variabilis:92 P.jiroveci:92

E1ZLM7              	100.00%		L0PDQ8              	100.00%
Bootstrap support for E1ZLM7 as seed ortholog is 100%.
Bootstrap support for L0PDQ8 as seed ortholog is 100%.

Group of orthologs #884. Best score 91 bits
Score difference with first non-orthologous sequence - C.variabilis:91 P.jiroveci:91

E1Z9U6              	100.00%		L0P852              	100.00%
Bootstrap support for E1Z9U6 as seed ortholog is 100%.
Bootstrap support for L0P852 as seed ortholog is 100%.

Group of orthologs #885. Best score 91 bits
Score difference with first non-orthologous sequence - C.variabilis:91 P.jiroveci:14

E1ZAU2              	100.00%		L0P9V0              	100.00%
Bootstrap support for E1ZAU2 as seed ortholog is 100%.
Bootstrap support for L0P9V0 as seed ortholog is 70%.
Alternative seed ortholog is L0PEK0 (14 bits away from this cluster)

Group of orthologs #886. Best score 91 bits
Score difference with first non-orthologous sequence - C.variabilis:91 P.jiroveci:91

E1Z5Q3              	100.00%		L0PHW2              	100.00%
Bootstrap support for E1Z5Q3 as seed ortholog is 100%.
Bootstrap support for L0PHW2 as seed ortholog is 100%.

Group of orthologs #887. Best score 91 bits
Score difference with first non-orthologous sequence - C.variabilis:35 P.jiroveci:91

E1ZBL5              	100.00%		L0PFM9              	100.00%
Bootstrap support for E1ZBL5 as seed ortholog is 98%.
Bootstrap support for L0PFM9 as seed ortholog is 100%.

Group of orthologs #888. Best score 91 bits
Score difference with first non-orthologous sequence - C.variabilis:91 P.jiroveci:91

E1ZF09              	100.00%		L0PE43              	100.00%
Bootstrap support for E1ZF09 as seed ortholog is 100%.
Bootstrap support for L0PE43 as seed ortholog is 100%.

Group of orthologs #889. Best score 91 bits
Score difference with first non-orthologous sequence - C.variabilis:91 P.jiroveci:91

E1ZQ26              	100.00%		L0P8G4              	100.00%
Bootstrap support for E1ZQ26 as seed ortholog is 100%.
Bootstrap support for L0P8G4 as seed ortholog is 100%.

Group of orthologs #890. Best score 90 bits
Score difference with first non-orthologous sequence - C.variabilis:30 P.jiroveci:90

E1Z9R9              	100.00%		L0PA37              	100.00%
E1ZBI9              	5.83%		
Bootstrap support for E1Z9R9 as seed ortholog is 95%.
Bootstrap support for L0PA37 as seed ortholog is 100%.

Group of orthologs #891. Best score 90 bits
Score difference with first non-orthologous sequence - C.variabilis:90 P.jiroveci:90

E1Z5A6              	100.00%		L0P868              	100.00%
Bootstrap support for E1Z5A6 as seed ortholog is 100%.
Bootstrap support for L0P868 as seed ortholog is 100%.

Group of orthologs #892. Best score 90 bits
Score difference with first non-orthologous sequence - C.variabilis:90 P.jiroveci:90

E1ZCI6              	100.00%		L0PEZ7              	100.00%
Bootstrap support for E1ZCI6 as seed ortholog is 100%.
Bootstrap support for L0PEZ7 as seed ortholog is 100%.

Group of orthologs #893. Best score 90 bits
Score difference with first non-orthologous sequence - C.variabilis:90 P.jiroveci:90

E1ZR91              	100.00%		L0PC08              	100.00%
Bootstrap support for E1ZR91 as seed ortholog is 100%.
Bootstrap support for L0PC08 as seed ortholog is 100%.

Group of orthologs #894. Best score 89 bits
Score difference with first non-orthologous sequence - C.variabilis:89 P.jiroveci:89

E1Z4I9              	100.00%		L0P6Q5              	100.00%
Bootstrap support for E1Z4I9 as seed ortholog is 100%.
Bootstrap support for L0P6Q5 as seed ortholog is 100%.

Group of orthologs #895. Best score 89 bits
Score difference with first non-orthologous sequence - C.variabilis:89 P.jiroveci:89

E1Z418              	100.00%		L0PA68              	100.00%
Bootstrap support for E1Z418 as seed ortholog is 100%.
Bootstrap support for L0PA68 as seed ortholog is 100%.

Group of orthologs #896. Best score 89 bits
Score difference with first non-orthologous sequence - C.variabilis:27 P.jiroveci:89

E1Z5I6              	100.00%		L0PDD4              	100.00%
Bootstrap support for E1Z5I6 as seed ortholog is 90%.
Bootstrap support for L0PDD4 as seed ortholog is 100%.

Group of orthologs #897. Best score 89 bits
Score difference with first non-orthologous sequence - C.variabilis:35 P.jiroveci:89

E1ZDH1              	100.00%		L0PDD8              	100.00%
Bootstrap support for E1ZDH1 as seed ortholog is 99%.
Bootstrap support for L0PDD8 as seed ortholog is 100%.

Group of orthologs #898. Best score 89 bits
Score difference with first non-orthologous sequence - C.variabilis:89 P.jiroveci:89

E1ZJ53              	100.00%		L0P805              	100.00%
Bootstrap support for E1ZJ53 as seed ortholog is 100%.
Bootstrap support for L0P805 as seed ortholog is 100%.

Group of orthologs #899. Best score 89 bits
Score difference with first non-orthologous sequence - C.variabilis:89 P.jiroveci:89

E1ZN73              	100.00%		L0PEV4              	100.00%
Bootstrap support for E1ZN73 as seed ortholog is 100%.
Bootstrap support for L0PEV4 as seed ortholog is 100%.

Group of orthologs #900. Best score 89 bits
Score difference with first non-orthologous sequence - C.variabilis:89 P.jiroveci:89

E1ZSR1              	100.00%		L0PFD0              	100.00%
Bootstrap support for E1ZSR1 as seed ortholog is 100%.
Bootstrap support for L0PFD0 as seed ortholog is 100%.

Group of orthologs #901. Best score 87 bits
Score difference with first non-orthologous sequence - C.variabilis:35 P.jiroveci:87

E1Z3G9              	100.00%		L0P6Z2              	100.00%
Bootstrap support for E1Z3G9 as seed ortholog is 87%.
Bootstrap support for L0P6Z2 as seed ortholog is 100%.

Group of orthologs #902. Best score 87 bits
Score difference with first non-orthologous sequence - C.variabilis:21 P.jiroveci:87

E1Z1Y6              	100.00%		L0PCN6              	100.00%
Bootstrap support for E1Z1Y6 as seed ortholog is 89%.
Bootstrap support for L0PCN6 as seed ortholog is 100%.

Group of orthologs #903. Best score 87 bits
Score difference with first non-orthologous sequence - C.variabilis:87 P.jiroveci:87

E1ZIU7              	100.00%		L0P9X6              	100.00%
Bootstrap support for E1ZIU7 as seed ortholog is 100%.
Bootstrap support for L0P9X6 as seed ortholog is 100%.

Group of orthologs #904. Best score 87 bits
Score difference with first non-orthologous sequence - C.variabilis:87 P.jiroveci:87

E1ZGH1              	100.00%		L0PFT3              	100.00%
Bootstrap support for E1ZGH1 as seed ortholog is 100%.
Bootstrap support for L0PFT3 as seed ortholog is 100%.

Group of orthologs #905. Best score 87 bits
Score difference with first non-orthologous sequence - C.variabilis:87 P.jiroveci:87

E1ZK51              	100.00%		L0PCG3              	100.00%
Bootstrap support for E1ZK51 as seed ortholog is 100%.
Bootstrap support for L0PCG3 as seed ortholog is 100%.

Group of orthologs #906. Best score 87 bits
Score difference with first non-orthologous sequence - C.variabilis:87 P.jiroveci:87

E1ZIT5              	100.00%		L0PEC9              	100.00%
Bootstrap support for E1ZIT5 as seed ortholog is 100%.
Bootstrap support for L0PEC9 as seed ortholog is 100%.

Group of orthologs #907. Best score 86 bits
Score difference with first non-orthologous sequence - C.variabilis:41 P.jiroveci:86

E1ZBC1              	100.00%		L0PBU9              	100.00%
E1ZQB2              	11.20%		
E1ZSK9              	5.60%		
Bootstrap support for E1ZBC1 as seed ortholog is 99%.
Bootstrap support for L0PBU9 as seed ortholog is 100%.

Group of orthologs #908. Best score 86 bits
Score difference with first non-orthologous sequence - C.variabilis:86 P.jiroveci:86

E1ZAJ6              	100.00%		L0PFK1              	100.00%
Bootstrap support for E1ZAJ6 as seed ortholog is 100%.
Bootstrap support for L0PFK1 as seed ortholog is 100%.

Group of orthologs #909. Best score 86 bits
Score difference with first non-orthologous sequence - C.variabilis:86 P.jiroveci:86

E1ZI08              	100.00%		L0PBZ3              	100.00%
Bootstrap support for E1ZI08 as seed ortholog is 100%.
Bootstrap support for L0PBZ3 as seed ortholog is 100%.

Group of orthologs #910. Best score 86 bits
Score difference with first non-orthologous sequence - C.variabilis:86 P.jiroveci:86

E1ZQQ1              	100.00%		L0PEF7              	100.00%
Bootstrap support for E1ZQQ1 as seed ortholog is 100%.
Bootstrap support for L0PEF7 as seed ortholog is 100%.

Group of orthologs #911. Best score 85 bits
Score difference with first non-orthologous sequence - C.variabilis:85 P.jiroveci:85

E1ZF49              	100.00%		L0PA74              	100.00%
Bootstrap support for E1ZF49 as seed ortholog is 100%.
Bootstrap support for L0PA74 as seed ortholog is 100%.

Group of orthologs #912. Best score 85 bits
Score difference with first non-orthologous sequence - C.variabilis:85 P.jiroveci:85

E1ZLF2              	100.00%		L0P9R5              	100.00%
Bootstrap support for E1ZLF2 as seed ortholog is 100%.
Bootstrap support for L0P9R5 as seed ortholog is 100%.

Group of orthologs #913. Best score 85 bits
Score difference with first non-orthologous sequence - C.variabilis:85 P.jiroveci:85

E1ZII6              	100.00%		L0PHQ1              	100.00%
Bootstrap support for E1ZII6 as seed ortholog is 100%.
Bootstrap support for L0PHQ1 as seed ortholog is 100%.

Group of orthologs #914. Best score 84 bits
Score difference with first non-orthologous sequence - C.variabilis:84 P.jiroveci:0

E1ZAS3              	100.00%		L0P9X1              	100.00%
E1Z952              	15.10%		
E1Z954              	12.54%		
E1Z3C4              	12.43%		
E1ZIE9              	12.31%		
E1Z953              	12.08%		
E1Z6V4              	8.83%		
E1ZCI2              	8.36%		
E1Z5D3              	7.20%		
E1ZNV4              	6.27%		
E1ZQM2              	5.46%		
Bootstrap support for E1ZAS3 as seed ortholog is 100%.
Bootstrap support for L0P9X1 as seed ortholog is 50%.
Alternative seed ortholog is L0PAR1 (0 bits away from this cluster)

Group of orthologs #915. Best score 84 bits
Score difference with first non-orthologous sequence - C.variabilis:84 P.jiroveci:12

E1Z202              	100.00%		L0PB17              	100.00%
Bootstrap support for E1Z202 as seed ortholog is 100%.
Bootstrap support for L0PB17 as seed ortholog is 60%.
Alternative seed ortholog is L0PEH9 (12 bits away from this cluster)

Group of orthologs #916. Best score 84 bits
Score difference with first non-orthologous sequence - C.variabilis:84 P.jiroveci:84

E1Z4B3              	100.00%		L0PEE1              	100.00%
Bootstrap support for E1Z4B3 as seed ortholog is 100%.
Bootstrap support for L0PEE1 as seed ortholog is 100%.

Group of orthologs #917. Best score 84 bits
Score difference with first non-orthologous sequence - C.variabilis:25 P.jiroveci:84

E1Z928              	100.00%		L0PB27              	100.00%
Bootstrap support for E1Z928 as seed ortholog is 92%.
Bootstrap support for L0PB27 as seed ortholog is 100%.

Group of orthologs #918. Best score 84 bits
Score difference with first non-orthologous sequence - C.variabilis:84 P.jiroveci:31

E1ZCN2              	100.00%		L0P9V4              	100.00%
Bootstrap support for E1ZCN2 as seed ortholog is 100%.
Bootstrap support for L0P9V4 as seed ortholog is 82%.

Group of orthologs #919. Best score 84 bits
Score difference with first non-orthologous sequence - C.variabilis:84 P.jiroveci:84

E1ZG83              	100.00%		L0P9H8              	100.00%
Bootstrap support for E1ZG83 as seed ortholog is 100%.
Bootstrap support for L0P9H8 as seed ortholog is 100%.

Group of orthologs #920. Best score 84 bits
Score difference with first non-orthologous sequence - C.variabilis:84 P.jiroveci:84

E1ZAS4              	100.00%		L0PFH1              	100.00%
Bootstrap support for E1ZAS4 as seed ortholog is 100%.
Bootstrap support for L0PFH1 as seed ortholog is 100%.

Group of orthologs #921. Best score 84 bits
Score difference with first non-orthologous sequence - C.variabilis:84 P.jiroveci:84

E1ZES0              	100.00%		L0PCX3              	100.00%
Bootstrap support for E1ZES0 as seed ortholog is 100%.
Bootstrap support for L0PCX3 as seed ortholog is 100%.

Group of orthologs #922. Best score 83 bits
Score difference with first non-orthologous sequence - C.variabilis:83 P.jiroveci:83

E1Z5A8              	100.00%		L0P8R9              	100.00%
Bootstrap support for E1Z5A8 as seed ortholog is 100%.
Bootstrap support for L0P8R9 as seed ortholog is 100%.

Group of orthologs #923. Best score 83 bits
Score difference with first non-orthologous sequence - C.variabilis:83 P.jiroveci:83

E1ZJS3              	100.00%		L0P9D5              	100.00%
Bootstrap support for E1ZJS3 as seed ortholog is 100%.
Bootstrap support for L0P9D5 as seed ortholog is 100%.

Group of orthologs #924. Best score 83 bits
Score difference with first non-orthologous sequence - C.variabilis:83 P.jiroveci:83

E1ZSD8              	100.00%		L0P8L2              	100.00%
Bootstrap support for E1ZSD8 as seed ortholog is 100%.
Bootstrap support for L0P8L2 as seed ortholog is 100%.

Group of orthologs #925. Best score 83 bits
Score difference with first non-orthologous sequence - C.variabilis:83 P.jiroveci:83

E1ZPV4              	100.00%		L0PDX9              	100.00%
Bootstrap support for E1ZPV4 as seed ortholog is 100%.
Bootstrap support for L0PDX9 as seed ortholog is 100%.

Group of orthologs #926. Best score 82 bits
Score difference with first non-orthologous sequence - C.variabilis:82 P.jiroveci:82

E1Z6N2              	100.00%		L0PCF7              	100.00%
Bootstrap support for E1Z6N2 as seed ortholog is 100%.
Bootstrap support for L0PCF7 as seed ortholog is 100%.

Group of orthologs #927. Best score 82 bits
Score difference with first non-orthologous sequence - C.variabilis:7 P.jiroveci:82

E1Z7Q9              	100.00%		L0PBX9              	100.00%
Bootstrap support for E1Z7Q9 as seed ortholog is 57%.
Alternative seed ortholog is E1ZCQ1 (7 bits away from this cluster)
Bootstrap support for L0PBX9 as seed ortholog is 100%.

Group of orthologs #928. Best score 82 bits
Score difference with first non-orthologous sequence - C.variabilis:82 P.jiroveci:82

E1ZCA7              	100.00%		L0PGK7              	100.00%
Bootstrap support for E1ZCA7 as seed ortholog is 100%.
Bootstrap support for L0PGK7 as seed ortholog is 100%.

Group of orthologs #929. Best score 82 bits
Score difference with first non-orthologous sequence - C.variabilis:82 P.jiroveci:82

E1ZC45              	100.00%		L0PHT7              	100.00%
Bootstrap support for E1ZC45 as seed ortholog is 100%.
Bootstrap support for L0PHT7 as seed ortholog is 100%.

Group of orthologs #930. Best score 82 bits
Score difference with first non-orthologous sequence - C.variabilis:82 P.jiroveci:82

E1ZLW4              	100.00%		L0PC03              	100.00%
Bootstrap support for E1ZLW4 as seed ortholog is 100%.
Bootstrap support for L0PC03 as seed ortholog is 100%.

Group of orthologs #931. Best score 82 bits
Score difference with first non-orthologous sequence - C.variabilis:82 P.jiroveci:82

E1ZLM2              	100.00%		L0PGS9              	100.00%
Bootstrap support for E1ZLM2 as seed ortholog is 100%.
Bootstrap support for L0PGS9 as seed ortholog is 100%.

Group of orthologs #932. Best score 82 bits
Score difference with first non-orthologous sequence - C.variabilis:82 P.jiroveci:82

E1ZTW4              	100.00%		L0PD45              	100.00%
Bootstrap support for E1ZTW4 as seed ortholog is 100%.
Bootstrap support for L0PD45 as seed ortholog is 100%.

Group of orthologs #933. Best score 81 bits
Score difference with first non-orthologous sequence - C.variabilis:81 P.jiroveci:81

E1Z4S2              	100.00%		L0PFF4              	100.00%
E1Z578              	18.62%		
Bootstrap support for E1Z4S2 as seed ortholog is 100%.
Bootstrap support for L0PFF4 as seed ortholog is 100%.

Group of orthologs #934. Best score 81 bits
Score difference with first non-orthologous sequence - C.variabilis:81 P.jiroveci:81

E1ZC75              	100.00%		L0PGM7              	100.00%
                    	       		L0PGY6              	95.11%
Bootstrap support for E1ZC75 as seed ortholog is 100%.
Bootstrap support for L0PGM7 as seed ortholog is 100%.

Group of orthologs #935. Best score 81 bits
Score difference with first non-orthologous sequence - C.variabilis:81 P.jiroveci:81

E1ZI67              	100.00%		L0PAV7              	100.00%
                    	       		L0PBJ9              	100.00%
Bootstrap support for E1ZI67 as seed ortholog is 100%.
Bootstrap support for L0PAV7 as seed ortholog is 100%.
Bootstrap support for L0PBJ9 as seed ortholog is 100%.

Group of orthologs #936. Best score 81 bits
Score difference with first non-orthologous sequence - C.variabilis:81 P.jiroveci:81

E1ZMN0              	100.00%		L0PCB1              	100.00%
                    	       		L0P728              	41.94%
Bootstrap support for E1ZMN0 as seed ortholog is 100%.
Bootstrap support for L0PCB1 as seed ortholog is 100%.

Group of orthologs #937. Best score 81 bits
Score difference with first non-orthologous sequence - C.variabilis:29 P.jiroveci:81

E1ZAZ4              	100.00%		L0PD91              	100.00%
Bootstrap support for E1ZAZ4 as seed ortholog is 94%.
Bootstrap support for L0PD91 as seed ortholog is 100%.

Group of orthologs #938. Best score 81 bits
Score difference with first non-orthologous sequence - C.variabilis:81 P.jiroveci:81

E1ZGX8              	100.00%		L0PCR0              	100.00%
Bootstrap support for E1ZGX8 as seed ortholog is 100%.
Bootstrap support for L0PCR0 as seed ortholog is 100%.

Group of orthologs #939. Best score 81 bits
Score difference with first non-orthologous sequence - C.variabilis:81 P.jiroveci:81

E1ZK00              	100.00%		L0PD07              	100.00%
Bootstrap support for E1ZK00 as seed ortholog is 100%.
Bootstrap support for L0PD07 as seed ortholog is 100%.

Group of orthologs #940. Best score 81 bits
Score difference with first non-orthologous sequence - C.variabilis:81 P.jiroveci:27

E1ZNF7              	100.00%		L0PA89              	100.00%
Bootstrap support for E1ZNF7 as seed ortholog is 100%.
Bootstrap support for L0PA89 as seed ortholog is 88%.

Group of orthologs #941. Best score 81 bits
Score difference with first non-orthologous sequence - C.variabilis:81 P.jiroveci:81

E1ZQQ4              	100.00%		L0P9B7              	100.00%
Bootstrap support for E1ZQQ4 as seed ortholog is 100%.
Bootstrap support for L0P9B7 as seed ortholog is 100%.

Group of orthologs #942. Best score 80 bits
Score difference with first non-orthologous sequence - C.variabilis:80 P.jiroveci:80

E1ZI88              	100.00%		L0P8C5              	100.00%
E1ZRS5              	23.70%		L0P7X3              	59.28%
Bootstrap support for E1ZI88 as seed ortholog is 100%.
Bootstrap support for L0P8C5 as seed ortholog is 100%.

Group of orthologs #943. Best score 80 bits
Score difference with first non-orthologous sequence - C.variabilis:80 P.jiroveci:80

E1ZQ38              	100.00%		L0P872              	100.00%
Bootstrap support for E1ZQ38 as seed ortholog is 100%.
Bootstrap support for L0P872 as seed ortholog is 100%.

Group of orthologs #944. Best score 79 bits
Score difference with first non-orthologous sequence - C.variabilis:79 P.jiroveci:79

E1Z7C3              	100.00%		L0P9F1              	100.00%
Bootstrap support for E1Z7C3 as seed ortholog is 100%.
Bootstrap support for L0P9F1 as seed ortholog is 100%.

Group of orthologs #945. Best score 79 bits
Score difference with first non-orthologous sequence - C.variabilis:79 P.jiroveci:79

E1Z582              	100.00%		L0PD16              	100.00%
Bootstrap support for E1Z582 as seed ortholog is 100%.
Bootstrap support for L0PD16 as seed ortholog is 100%.

Group of orthologs #946. Best score 79 bits
Score difference with first non-orthologous sequence - C.variabilis:79 P.jiroveci:79

E1Z5Q7              	100.00%		L0PEL6              	100.00%
Bootstrap support for E1Z5Q7 as seed ortholog is 100%.
Bootstrap support for L0PEL6 as seed ortholog is 100%.

Group of orthologs #947. Best score 79 bits
Score difference with first non-orthologous sequence - C.variabilis:79 P.jiroveci:79

E1ZKQ7              	100.00%		L0PBQ7              	100.00%
Bootstrap support for E1ZKQ7 as seed ortholog is 100%.
Bootstrap support for L0PBQ7 as seed ortholog is 100%.

Group of orthologs #948. Best score 79 bits
Score difference with first non-orthologous sequence - C.variabilis:79 P.jiroveci:79

E1ZI13              	100.00%		L0PF16              	100.00%
Bootstrap support for E1ZI13 as seed ortholog is 100%.
Bootstrap support for L0PF16 as seed ortholog is 100%.

Group of orthologs #949. Best score 79 bits
Score difference with first non-orthologous sequence - C.variabilis:79 P.jiroveci:79

E1ZMI5              	100.00%		L0PFR5              	100.00%
Bootstrap support for E1ZMI5 as seed ortholog is 100%.
Bootstrap support for L0PFR5 as seed ortholog is 100%.

Group of orthologs #950. Best score 78 bits
Score difference with first non-orthologous sequence - C.variabilis:78 P.jiroveci:78

E1ZAJ7              	100.00%		L0P8W8              	100.00%
                    	       		L0P9K5              	57.79%
Bootstrap support for E1ZAJ7 as seed ortholog is 100%.
Bootstrap support for L0P8W8 as seed ortholog is 100%.

Group of orthologs #951. Best score 78 bits
Score difference with first non-orthologous sequence - C.variabilis:78 P.jiroveci:78

E1ZMP0              	100.00%		L0PDW7              	100.00%
                    	       		L0PIN1              	64.56%
Bootstrap support for E1ZMP0 as seed ortholog is 100%.
Bootstrap support for L0PDW7 as seed ortholog is 100%.

Group of orthologs #952. Best score 78 bits
Score difference with first non-orthologous sequence - C.variabilis:78 P.jiroveci:78

E1ZUR2              	100.00%		L0PD48              	100.00%
                    	       		L0PGS1              	5.04%
Bootstrap support for E1ZUR2 as seed ortholog is 100%.
Bootstrap support for L0PD48 as seed ortholog is 100%.

Group of orthologs #953. Best score 78 bits
Score difference with first non-orthologous sequence - C.variabilis:78 P.jiroveci:78

E1ZEB0              	100.00%		L0P963              	100.00%
Bootstrap support for E1ZEB0 as seed ortholog is 100%.
Bootstrap support for L0P963 as seed ortholog is 100%.

Group of orthologs #954. Best score 78 bits
Score difference with first non-orthologous sequence - C.variabilis:78 P.jiroveci:78

E1Z9I6              	100.00%		L0PE32              	100.00%
Bootstrap support for E1Z9I6 as seed ortholog is 100%.
Bootstrap support for L0PE32 as seed ortholog is 100%.

Group of orthologs #955. Best score 78 bits
Score difference with first non-orthologous sequence - C.variabilis:78 P.jiroveci:78

E1ZLE5              	100.00%		L0P8J0              	100.00%
Bootstrap support for E1ZLE5 as seed ortholog is 100%.
Bootstrap support for L0P8J0 as seed ortholog is 100%.

Group of orthologs #956. Best score 77 bits
Score difference with first non-orthologous sequence - C.variabilis:77 P.jiroveci:77

E1Z5Z5              	100.00%		L0PDV8              	100.00%
E1Z5Y5              	20.89%		
Bootstrap support for E1Z5Z5 as seed ortholog is 100%.
Bootstrap support for L0PDV8 as seed ortholog is 100%.

Group of orthologs #957. Best score 77 bits
Score difference with first non-orthologous sequence - C.variabilis:77 P.jiroveci:77

E1Z867              	100.00%		L0PAM7              	100.00%
Bootstrap support for E1Z867 as seed ortholog is 100%.
Bootstrap support for L0PAM7 as seed ortholog is 100%.

Group of orthologs #958. Best score 77 bits
Score difference with first non-orthologous sequence - C.variabilis:77 P.jiroveci:77

E1ZCS1              	100.00%		L0PDZ3              	100.00%
Bootstrap support for E1ZCS1 as seed ortholog is 100%.
Bootstrap support for L0PDZ3 as seed ortholog is 100%.

Group of orthologs #959. Best score 77 bits
Score difference with first non-orthologous sequence - C.variabilis:77 P.jiroveci:77

E1ZL16              	100.00%		L0PEX4              	100.00%
Bootstrap support for E1ZL16 as seed ortholog is 100%.
Bootstrap support for L0PEX4 as seed ortholog is 100%.

Group of orthologs #960. Best score 76 bits
Score difference with first non-orthologous sequence - C.variabilis:76 P.jiroveci:76

E1Z8D1              	100.00%		L0PB40              	100.00%
E1ZHZ7              	30.28%		
Bootstrap support for E1Z8D1 as seed ortholog is 100%.
Bootstrap support for L0PB40 as seed ortholog is 100%.

Group of orthologs #961. Best score 76 bits
Score difference with first non-orthologous sequence - C.variabilis:76 P.jiroveci:76

E1ZDW8              	100.00%		L0PEB9              	100.00%
                    	       		L0PA79              	63.48%
Bootstrap support for E1ZDW8 as seed ortholog is 100%.
Bootstrap support for L0PEB9 as seed ortholog is 100%.

Group of orthologs #962. Best score 76 bits
Score difference with first non-orthologous sequence - C.variabilis:76 P.jiroveci:76

E1ZP72              	100.00%		L0PB42              	100.00%
E1Z6B2              	7.62%		
Bootstrap support for E1ZP72 as seed ortholog is 100%.
Bootstrap support for L0PB42 as seed ortholog is 100%.

Group of orthologs #963. Best score 76 bits
Score difference with first non-orthologous sequence - C.variabilis:76 P.jiroveci:76

E1Z807              	100.00%		L0PGH5              	100.00%
Bootstrap support for E1Z807 as seed ortholog is 100%.
Bootstrap support for L0PGH5 as seed ortholog is 100%.

Group of orthologs #964. Best score 76 bits
Score difference with first non-orthologous sequence - C.variabilis:76 P.jiroveci:76

E1ZCN0              	100.00%		L0PGP5              	100.00%
Bootstrap support for E1ZCN0 as seed ortholog is 100%.
Bootstrap support for L0PGP5 as seed ortholog is 100%.

Group of orthologs #965. Best score 76 bits
Score difference with first non-orthologous sequence - C.variabilis:31 P.jiroveci:76

E1ZM80              	100.00%		L0PAK0              	100.00%
Bootstrap support for E1ZM80 as seed ortholog is 93%.
Bootstrap support for L0PAK0 as seed ortholog is 100%.

Group of orthologs #966. Best score 76 bits
Score difference with first non-orthologous sequence - C.variabilis:76 P.jiroveci:76

E1ZP09              	100.00%		L0PGJ6              	100.00%
Bootstrap support for E1ZP09 as seed ortholog is 100%.
Bootstrap support for L0PGJ6 as seed ortholog is 100%.

Group of orthologs #967. Best score 75 bits
Score difference with first non-orthologous sequence - C.variabilis:75 P.jiroveci:75

E1ZM43              	100.00%		L0P7E2              	100.00%
E1ZPS2              	15.27%		
Bootstrap support for E1ZM43 as seed ortholog is 100%.
Bootstrap support for L0P7E2 as seed ortholog is 100%.

Group of orthologs #968. Best score 75 bits
Score difference with first non-orthologous sequence - C.variabilis:75 P.jiroveci:75

E1Z6T1              	100.00%		L0PHI8              	100.00%
Bootstrap support for E1Z6T1 as seed ortholog is 100%.
Bootstrap support for L0PHI8 as seed ortholog is 100%.

Group of orthologs #969. Best score 75 bits
Score difference with first non-orthologous sequence - C.variabilis:75 P.jiroveci:75

E1ZFJ8              	100.00%		L0PB99              	100.00%
Bootstrap support for E1ZFJ8 as seed ortholog is 100%.
Bootstrap support for L0PB99 as seed ortholog is 100%.

Group of orthologs #970. Best score 75 bits
Score difference with first non-orthologous sequence - C.variabilis:75 P.jiroveci:75

E1ZDG4              	100.00%		L0PEL9              	100.00%
Bootstrap support for E1ZDG4 as seed ortholog is 100%.
Bootstrap support for L0PEL9 as seed ortholog is 100%.

Group of orthologs #971. Best score 75 bits
Score difference with first non-orthologous sequence - C.variabilis:75 P.jiroveci:75

E1ZIA9              	100.00%		L0PA43              	100.00%
Bootstrap support for E1ZIA9 as seed ortholog is 100%.
Bootstrap support for L0PA43 as seed ortholog is 100%.

Group of orthologs #972. Best score 73 bits
Score difference with first non-orthologous sequence - C.variabilis:73 P.jiroveci:73

E1Z1Y0              	100.00%		L0PCU7              	100.00%
Bootstrap support for E1Z1Y0 as seed ortholog is 100%.
Bootstrap support for L0PCU7 as seed ortholog is 100%.

Group of orthologs #973. Best score 73 bits
Score difference with first non-orthologous sequence - C.variabilis:73 P.jiroveci:73

E1ZRJ5              	100.00%		L0P733              	100.00%
Bootstrap support for E1ZRJ5 as seed ortholog is 100%.
Bootstrap support for L0P733 as seed ortholog is 100%.

Group of orthologs #974. Best score 73 bits
Score difference with first non-orthologous sequence - C.variabilis:73 P.jiroveci:73

F2YGN6              	100.00%		L0P875              	100.00%
Bootstrap support for F2YGN6 as seed ortholog is 100%.
Bootstrap support for L0P875 as seed ortholog is 100%.

Group of orthologs #975. Best score 72 bits
Score difference with first non-orthologous sequence - C.variabilis:72 P.jiroveci:72

E1Z4U1              	100.00%		L0PC48              	100.00%
Bootstrap support for E1Z4U1 as seed ortholog is 100%.
Bootstrap support for L0PC48 as seed ortholog is 100%.

Group of orthologs #976. Best score 72 bits
Score difference with first non-orthologous sequence - C.variabilis:72 P.jiroveci:72

E1Z2Q3              	100.00%		L0PF93              	100.00%
Bootstrap support for E1Z2Q3 as seed ortholog is 100%.
Bootstrap support for L0PF93 as seed ortholog is 100%.

Group of orthologs #977. Best score 72 bits
Score difference with first non-orthologous sequence - C.variabilis:72 P.jiroveci:72

E1Z3G0              	100.00%		L0PHM6              	100.00%
Bootstrap support for E1Z3G0 as seed ortholog is 100%.
Bootstrap support for L0PHM6 as seed ortholog is 100%.

Group of orthologs #978. Best score 72 bits
Score difference with first non-orthologous sequence - C.variabilis:72 P.jiroveci:72

E1ZJB0              	100.00%		L0PCD9              	100.00%
Bootstrap support for E1ZJB0 as seed ortholog is 100%.
Bootstrap support for L0PCD9 as seed ortholog is 100%.

Group of orthologs #979. Best score 72 bits
Score difference with first non-orthologous sequence - C.variabilis:72 P.jiroveci:72

E1ZIC0              	100.00%		L0PGS0              	100.00%
Bootstrap support for E1ZIC0 as seed ortholog is 100%.
Bootstrap support for L0PGS0 as seed ortholog is 100%.

Group of orthologs #980. Best score 72 bits
Score difference with first non-orthologous sequence - C.variabilis:15 P.jiroveci:16

E1ZKY3              	100.00%		L0PFW6              	100.00%
Bootstrap support for E1ZKY3 as seed ortholog is 55%.
Alternative seed ortholog is F2YGI5 (15 bits away from this cluster)
Bootstrap support for L0PFW6 as seed ortholog is 68%.
Alternative seed ortholog is L0PCR9 (16 bits away from this cluster)

Group of orthologs #981. Best score 72 bits
Score difference with first non-orthologous sequence - C.variabilis:72 P.jiroveci:72

E1ZQ46              	100.00%		L0PGK9              	100.00%
Bootstrap support for E1ZQ46 as seed ortholog is 100%.
Bootstrap support for L0PGK9 as seed ortholog is 100%.

Group of orthologs #982. Best score 71 bits
Score difference with first non-orthologous sequence - C.variabilis:71 P.jiroveci:71

E1ZBB6              	100.00%		L0PC66              	100.00%
                    	       		L0PBN8              	83.72%
Bootstrap support for E1ZBB6 as seed ortholog is 100%.
Bootstrap support for L0PC66 as seed ortholog is 100%.

Group of orthologs #983. Best score 71 bits
Score difference with first non-orthologous sequence - C.variabilis:71 P.jiroveci:71

E1Z6P0              	100.00%		L0PGF8              	100.00%
Bootstrap support for E1Z6P0 as seed ortholog is 100%.
Bootstrap support for L0PGF8 as seed ortholog is 100%.

Group of orthologs #984. Best score 71 bits
Score difference with first non-orthologous sequence - C.variabilis:71 P.jiroveci:71

E1ZJ27              	100.00%		L0PCF2              	100.00%
Bootstrap support for E1ZJ27 as seed ortholog is 100%.
Bootstrap support for L0PCF2 as seed ortholog is 100%.

Group of orthologs #985. Best score 71 bits
Score difference with first non-orthologous sequence - C.variabilis:71 P.jiroveci:71

E1ZN58              	100.00%		L0PAV0              	100.00%
Bootstrap support for E1ZN58 as seed ortholog is 100%.
Bootstrap support for L0PAV0 as seed ortholog is 100%.

Group of orthologs #986. Best score 71 bits
Score difference with first non-orthologous sequence - C.variabilis:71 P.jiroveci:71

E1ZQ11              	100.00%		L0PBR8              	100.00%
Bootstrap support for E1ZQ11 as seed ortholog is 100%.
Bootstrap support for L0PBR8 as seed ortholog is 100%.

Group of orthologs #987. Best score 71 bits
Score difference with first non-orthologous sequence - C.variabilis:71 P.jiroveci:71

E1ZR73              	100.00%		L0PBX3              	100.00%
Bootstrap support for E1ZR73 as seed ortholog is 100%.
Bootstrap support for L0PBX3 as seed ortholog is 100%.

Group of orthologs #988. Best score 70 bits
Score difference with first non-orthologous sequence - C.variabilis:18 P.jiroveci:1

E1ZP37              	100.00%		L0PDW2              	100.00%
E1ZIS7              	6.73%		
Bootstrap support for E1ZP37 as seed ortholog is 68%.
Alternative seed ortholog is E1ZGT3 (18 bits away from this cluster)
Bootstrap support for L0PDW2 as seed ortholog is 45%.
Alternative seed ortholog is L0PEF8 (1 bits away from this cluster)

Group of orthologs #989. Best score 70 bits
Score difference with first non-orthologous sequence - C.variabilis:1 P.jiroveci:70

E1Z997              	100.00%		L0P9W7              	100.00%
Bootstrap support for E1Z997 as seed ortholog is 51%.
Alternative seed ortholog is E1ZFC3 (1 bits away from this cluster)
Bootstrap support for L0P9W7 as seed ortholog is 100%.

Group of orthologs #990. Best score 70 bits
Score difference with first non-orthologous sequence - C.variabilis:70 P.jiroveci:70

E1ZG80              	100.00%		L0P864              	100.00%
Bootstrap support for E1ZG80 as seed ortholog is 100%.
Bootstrap support for L0P864 as seed ortholog is 100%.

Group of orthologs #991. Best score 70 bits
Score difference with first non-orthologous sequence - C.variabilis:70 P.jiroveci:70

E1Z810              	100.00%		L0PHH5              	100.00%
Bootstrap support for E1Z810 as seed ortholog is 100%.
Bootstrap support for L0PHH5 as seed ortholog is 100%.

Group of orthologs #992. Best score 70 bits
Score difference with first non-orthologous sequence - C.variabilis:70 P.jiroveci:70

E1ZEF6              	100.00%		L0PFN7              	100.00%
Bootstrap support for E1ZEF6 as seed ortholog is 100%.
Bootstrap support for L0PFN7 as seed ortholog is 100%.

Group of orthologs #993. Best score 70 bits
Score difference with first non-orthologous sequence - C.variabilis:70 P.jiroveci:70

E1ZRN4              	100.00%		L0P7Y1              	100.00%
Bootstrap support for E1ZRN4 as seed ortholog is 100%.
Bootstrap support for L0P7Y1 as seed ortholog is 100%.

Group of orthologs #994. Best score 70 bits
Score difference with first non-orthologous sequence - C.variabilis:70 P.jiroveci:70

E1ZQJ9              	100.00%		L0PG83              	100.00%
Bootstrap support for E1ZQJ9 as seed ortholog is 100%.
Bootstrap support for L0PG83 as seed ortholog is 100%.

Group of orthologs #995. Best score 69 bits
Score difference with first non-orthologous sequence - C.variabilis:69 P.jiroveci:69

E1ZFG8              	100.00%		L0PAM6              	100.00%
Bootstrap support for E1ZFG8 as seed ortholog is 100%.
Bootstrap support for L0PAM6 as seed ortholog is 100%.

Group of orthologs #996. Best score 69 bits
Score difference with first non-orthologous sequence - C.variabilis:69 P.jiroveci:69

E1ZSY5              	100.00%		L0P7D7              	100.00%
Bootstrap support for E1ZSY5 as seed ortholog is 100%.
Bootstrap support for L0P7D7 as seed ortholog is 100%.

Group of orthologs #997. Best score 68 bits
Score difference with first non-orthologous sequence - C.variabilis:68 P.jiroveci:68

E1ZN55              	100.00%		L0PDT3              	100.00%
E1ZI81              	12.35%		
E1Z2X2              	11.29%		
E1Z303              	8.23%		
Bootstrap support for E1ZN55 as seed ortholog is 100%.
Bootstrap support for L0PDT3 as seed ortholog is 100%.

Group of orthologs #998. Best score 68 bits
Score difference with first non-orthologous sequence - C.variabilis:68 P.jiroveci:68

E1Z8C6              	100.00%		L0PCQ4              	100.00%
Bootstrap support for E1Z8C6 as seed ortholog is 100%.
Bootstrap support for L0PCQ4 as seed ortholog is 100%.

Group of orthologs #999. Best score 67 bits
Score difference with first non-orthologous sequence - C.variabilis:6 P.jiroveci:67

E1ZJD3              	100.00%		L0PBZ4              	100.00%
E1ZJD4              	18.45%		
E1ZJE3              	13.39%		
E1ZJC9              	11.01%		
E1ZJH2              	9.82%		
E1ZL70              	9.82%		
E1ZBS0              	9.52%		
E1ZJH0              	9.52%		
E1ZJF2              	9.23%		
E1ZJH3              	9.23%		
E1ZJJ6              	9.23%		
E1ZJE4              	8.63%		
E1ZJE2              	8.63%		
E1ZS50              	8.04%		
E1ZAN4              	5.95%		
Bootstrap support for E1ZJD3 as seed ortholog is 63%.
Alternative seed ortholog is E1ZI41 (6 bits away from this cluster)
Bootstrap support for L0PBZ4 as seed ortholog is 100%.

Group of orthologs #1000. Best score 67 bits
Score difference with first non-orthologous sequence - C.variabilis:67 P.jiroveci:67

E1Z4W9              	100.00%		L0PGF4              	100.00%
Bootstrap support for E1Z4W9 as seed ortholog is 100%.
Bootstrap support for L0PGF4 as seed ortholog is 100%.

Group of orthologs #1001. Best score 67 bits
Score difference with first non-orthologous sequence - C.variabilis:67 P.jiroveci:67

E1ZCZ1              	100.00%		L0P990              	100.00%
Bootstrap support for E1ZCZ1 as seed ortholog is 100%.
Bootstrap support for L0P990 as seed ortholog is 100%.

Group of orthologs #1002. Best score 67 bits
Score difference with first non-orthologous sequence - C.variabilis:67 P.jiroveci:26

E1ZDG6              	100.00%		L0PAH2              	100.00%
Bootstrap support for E1ZDG6 as seed ortholog is 100%.
Bootstrap support for L0PAH2 as seed ortholog is 74%.
Alternative seed ortholog is L0PAG8 (26 bits away from this cluster)

Group of orthologs #1003. Best score 67 bits
Score difference with first non-orthologous sequence - C.variabilis:67 P.jiroveci:67

E1ZGR3              	100.00%		L0P9A5              	100.00%
Bootstrap support for E1ZGR3 as seed ortholog is 100%.
Bootstrap support for L0P9A5 as seed ortholog is 100%.

Group of orthologs #1004. Best score 66 bits
Score difference with first non-orthologous sequence - C.variabilis:66 P.jiroveci:66

E1Z5J7              	100.00%		L0PF41              	100.00%
Bootstrap support for E1Z5J7 as seed ortholog is 100%.
Bootstrap support for L0PF41 as seed ortholog is 100%.

Group of orthologs #1005. Best score 66 bits
Score difference with first non-orthologous sequence - C.variabilis:66 P.jiroveci:66

E1ZCB7              	100.00%		L0PEB3              	100.00%
Bootstrap support for E1ZCB7 as seed ortholog is 100%.
Bootstrap support for L0PEB3 as seed ortholog is 100%.

Group of orthologs #1006. Best score 66 bits
Score difference with first non-orthologous sequence - C.variabilis:66 P.jiroveci:66

E1ZIM0              	100.00%		L0PCN2              	100.00%
Bootstrap support for E1ZIM0 as seed ortholog is 100%.
Bootstrap support for L0PCN2 as seed ortholog is 100%.

Group of orthologs #1007. Best score 66 bits
Score difference with first non-orthologous sequence - C.variabilis:66 P.jiroveci:66

E1ZMP1              	100.00%		L0P9K1              	100.00%
Bootstrap support for E1ZMP1 as seed ortholog is 100%.
Bootstrap support for L0P9K1 as seed ortholog is 100%.

Group of orthologs #1008. Best score 66 bits
Score difference with first non-orthologous sequence - C.variabilis:66 P.jiroveci:11

E1ZNJ9              	100.00%		L0PE10              	100.00%
Bootstrap support for E1ZNJ9 as seed ortholog is 100%.
Bootstrap support for L0PE10 as seed ortholog is 68%.
Alternative seed ortholog is L0PDF0 (11 bits away from this cluster)

Group of orthologs #1009. Best score 65 bits
Score difference with first non-orthologous sequence - C.variabilis:65 P.jiroveci:65

E1Z8L3              	100.00%		L0PGC0              	100.00%
E1Z8R7              	7.11%		
Bootstrap support for E1Z8L3 as seed ortholog is 100%.
Bootstrap support for L0PGC0 as seed ortholog is 100%.

Group of orthologs #1010. Best score 65 bits
Score difference with first non-orthologous sequence - C.variabilis:65 P.jiroveci:65

E1ZML9              	100.00%		L0PAV4              	100.00%
Bootstrap support for E1ZML9 as seed ortholog is 100%.
Bootstrap support for L0PAV4 as seed ortholog is 100%.

Group of orthologs #1011. Best score 65 bits
Score difference with first non-orthologous sequence - C.variabilis:65 P.jiroveci:65

E1ZGF2              	100.00%		L0PHU9              	100.00%
Bootstrap support for E1ZGF2 as seed ortholog is 100%.
Bootstrap support for L0PHU9 as seed ortholog is 100%.

Group of orthologs #1012. Best score 64 bits
Score difference with first non-orthologous sequence - C.variabilis:64 P.jiroveci:64

E1Z922              	100.00%		L0P8U3              	100.00%
Bootstrap support for E1Z922 as seed ortholog is 100%.
Bootstrap support for L0P8U3 as seed ortholog is 100%.

Group of orthologs #1013. Best score 64 bits
Score difference with first non-orthologous sequence - C.variabilis:64 P.jiroveci:64

E1Z4B7              	100.00%		L0PFF8              	100.00%
Bootstrap support for E1Z4B7 as seed ortholog is 100%.
Bootstrap support for L0PFF8 as seed ortholog is 100%.

Group of orthologs #1014. Best score 64 bits
Score difference with first non-orthologous sequence - C.variabilis:64 P.jiroveci:64

E1ZC76              	100.00%		L0PEL2              	100.00%
Bootstrap support for E1ZC76 as seed ortholog is 100%.
Bootstrap support for L0PEL2 as seed ortholog is 100%.

Group of orthologs #1015. Best score 64 bits
Score difference with first non-orthologous sequence - C.variabilis:64 P.jiroveci:64

E1ZCY1              	100.00%		L0PFJ3              	100.00%
Bootstrap support for E1ZCY1 as seed ortholog is 100%.
Bootstrap support for L0PFJ3 as seed ortholog is 100%.

Group of orthologs #1016. Best score 64 bits
Score difference with first non-orthologous sequence - C.variabilis:64 P.jiroveci:64

E1ZRW5              	100.00%		L0PCP2              	100.00%
Bootstrap support for E1ZRW5 as seed ortholog is 100%.
Bootstrap support for L0PCP2 as seed ortholog is 100%.

Group of orthologs #1017. Best score 63 bits
Score difference with first non-orthologous sequence - C.variabilis:63 P.jiroveci:63

E1ZJ81              	100.00%		L0PAP8              	100.00%
Bootstrap support for E1ZJ81 as seed ortholog is 100%.
Bootstrap support for L0PAP8 as seed ortholog is 100%.

Group of orthologs #1018. Best score 63 bits
Score difference with first non-orthologous sequence - C.variabilis:63 P.jiroveci:63

E1ZI49              	100.00%		L0PDW6              	100.00%
Bootstrap support for E1ZI49 as seed ortholog is 100%.
Bootstrap support for L0PDW6 as seed ortholog is 100%.

Group of orthologs #1019. Best score 63 bits
Score difference with first non-orthologous sequence - C.variabilis:63 P.jiroveci:63

E1ZRT5              	100.00%		L0PE21              	100.00%
Bootstrap support for E1ZRT5 as seed ortholog is 100%.
Bootstrap support for L0PE21 as seed ortholog is 100%.

Group of orthologs #1020. Best score 62 bits
Score difference with first non-orthologous sequence - C.variabilis:17 P.jiroveci:62

E1Z9C7              	100.00%		L0PBK6              	100.00%
E1Z9D7              	30.30%		
E1Z267              	25.29%		
E1ZI93              	14.38%		
E1ZKF1              	8.60%		
E1ZPW6              	6.29%		
Bootstrap support for E1Z9C7 as seed ortholog is 64%.
Alternative seed ortholog is E1ZCA4 (17 bits away from this cluster)
Bootstrap support for L0PBK6 as seed ortholog is 100%.

Group of orthologs #1021. Best score 62 bits
Score difference with first non-orthologous sequence - C.variabilis:62 P.jiroveci:62

E1Z2X8              	100.00%		L0PCT4              	100.00%
E1Z3C5              	9.71%		
Bootstrap support for E1Z2X8 as seed ortholog is 100%.
Bootstrap support for L0PCT4 as seed ortholog is 100%.

Group of orthologs #1022. Best score 62 bits
Score difference with first non-orthologous sequence - C.variabilis:62 P.jiroveci:62

E1Z3L0              	100.00%		L0PB92              	100.00%
Bootstrap support for E1Z3L0 as seed ortholog is 100%.
Bootstrap support for L0PB92 as seed ortholog is 100%.

Group of orthologs #1023. Best score 62 bits
Score difference with first non-orthologous sequence - C.variabilis:62 P.jiroveci:62

E1Z8H1              	100.00%		L0PBL1              	100.00%
Bootstrap support for E1Z8H1 as seed ortholog is 100%.
Bootstrap support for L0PBL1 as seed ortholog is 100%.

Group of orthologs #1024. Best score 62 bits
Score difference with first non-orthologous sequence - C.variabilis:62 P.jiroveci:62

E1ZM00              	100.00%		L0P8Q9              	100.00%
Bootstrap support for E1ZM00 as seed ortholog is 100%.
Bootstrap support for L0P8Q9 as seed ortholog is 100%.

Group of orthologs #1025. Best score 62 bits
Score difference with first non-orthologous sequence - C.variabilis:62 P.jiroveci:62

E1ZIG5              	100.00%		L0PDR4              	100.00%
Bootstrap support for E1ZIG5 as seed ortholog is 100%.
Bootstrap support for L0PDR4 as seed ortholog is 100%.

Group of orthologs #1026. Best score 62 bits
Score difference with first non-orthologous sequence - C.variabilis:62 P.jiroveci:62

E1ZPM5              	100.00%		L0PFR0              	100.00%
Bootstrap support for E1ZPM5 as seed ortholog is 100%.
Bootstrap support for L0PFR0 as seed ortholog is 100%.

Group of orthologs #1027. Best score 61 bits
Score difference with first non-orthologous sequence - C.variabilis:61 P.jiroveci:61

E1Z433              	100.00%		L0PB88              	100.00%
Bootstrap support for E1Z433 as seed ortholog is 100%.
Bootstrap support for L0PB88 as seed ortholog is 100%.

Group of orthologs #1028. Best score 61 bits
Score difference with first non-orthologous sequence - C.variabilis:61 P.jiroveci:61

E1Z4G3              	100.00%		L0PCB6              	100.00%
Bootstrap support for E1Z4G3 as seed ortholog is 100%.
Bootstrap support for L0PCB6 as seed ortholog is 100%.

Group of orthologs #1029. Best score 61 bits
Score difference with first non-orthologous sequence - C.variabilis:61 P.jiroveci:61

E1ZJP2              	100.00%		L0PEH3              	100.00%
Bootstrap support for E1ZJP2 as seed ortholog is 100%.
Bootstrap support for L0PEH3 as seed ortholog is 100%.

Group of orthologs #1030. Best score 61 bits
Score difference with first non-orthologous sequence - C.variabilis:61 P.jiroveci:61

E1ZTL3              	100.00%		L0P9H6              	100.00%
Bootstrap support for E1ZTL3 as seed ortholog is 100%.
Bootstrap support for L0P9H6 as seed ortholog is 100%.

Group of orthologs #1031. Best score 60 bits
Score difference with first non-orthologous sequence - C.variabilis:60 P.jiroveci:60

E1Z5P0              	100.00%		L0PAE2              	100.00%
Bootstrap support for E1Z5P0 as seed ortholog is 100%.
Bootstrap support for L0PAE2 as seed ortholog is 100%.

Group of orthologs #1032. Best score 59 bits
Score difference with first non-orthologous sequence - C.variabilis:59 P.jiroveci:59

E1ZBU9              	100.00%		L0PH81              	100.00%
                    	       		L0PET0              	89.22%
Bootstrap support for E1ZBU9 as seed ortholog is 100%.
Bootstrap support for L0PH81 as seed ortholog is 100%.

Group of orthologs #1033. Best score 59 bits
Score difference with first non-orthologous sequence - C.variabilis:12 P.jiroveci:59

C4P7X0              	100.00%		L0PC75              	100.00%
Bootstrap support for C4P7X0 as seed ortholog is 66%.
Alternative seed ortholog is E1ZFP3 (12 bits away from this cluster)
Bootstrap support for L0PC75 as seed ortholog is 100%.

Group of orthologs #1034. Best score 59 bits
Score difference with first non-orthologous sequence - C.variabilis:59 P.jiroveci:59

E1ZAR5              	100.00%		L0PGU4              	100.00%
Bootstrap support for E1ZAR5 as seed ortholog is 100%.
Bootstrap support for L0PGU4 as seed ortholog is 100%.

Group of orthologs #1035. Best score 59 bits
Score difference with first non-orthologous sequence - C.variabilis:59 P.jiroveci:59

E1ZJT5              	100.00%		L0PAJ4              	100.00%
Bootstrap support for E1ZJT5 as seed ortholog is 100%.
Bootstrap support for L0PAJ4 as seed ortholog is 100%.

Group of orthologs #1036. Best score 59 bits
Score difference with first non-orthologous sequence - C.variabilis:59 P.jiroveci:59

E1ZGU5              	100.00%		L0PE38              	100.00%
Bootstrap support for E1ZGU5 as seed ortholog is 100%.
Bootstrap support for L0PE38 as seed ortholog is 100%.

Group of orthologs #1037. Best score 59 bits
Score difference with first non-orthologous sequence - C.variabilis:1 P.jiroveci:59

E1ZQ35              	100.00%		L0PBX7              	100.00%
Bootstrap support for E1ZQ35 as seed ortholog is 52%.
Alternative seed ortholog is E1Z6X7 (1 bits away from this cluster)
Bootstrap support for L0PBX7 as seed ortholog is 100%.

Group of orthologs #1038. Best score 59 bits
Score difference with first non-orthologous sequence - C.variabilis:59 P.jiroveci:59

E1ZML2              	100.00%		L0PGX1              	100.00%
Bootstrap support for E1ZML2 as seed ortholog is 100%.
Bootstrap support for L0PGX1 as seed ortholog is 100%.

Group of orthologs #1039. Best score 59 bits
Score difference with first non-orthologous sequence - C.variabilis:59 P.jiroveci:59

E1ZPM0              	100.00%		L0PG35              	100.00%
Bootstrap support for E1ZPM0 as seed ortholog is 100%.
Bootstrap support for L0PG35 as seed ortholog is 100%.

Group of orthologs #1040. Best score 58 bits
Score difference with first non-orthologous sequence - C.variabilis:58 P.jiroveci:6

E1ZBZ9              	100.00%		L0PAN3              	100.00%
E1ZBZ8              	60.08%		L0PE81              	20.76%
E1ZGN8              	29.72%		
E1Z5F4              	29.21%		
E1ZFD9              	25.77%		
E1Z3S8              	16.07%		
E1Z7R1              	10.97%		
E1Z643              	7.53%		
E1ZT59              	7.14%		
E1Z428              	6.38%		
E1ZFU8              	5.48%		
Bootstrap support for E1ZBZ9 as seed ortholog is 100%.
Bootstrap support for L0PAN3 as seed ortholog is 54%.
Alternative seed ortholog is L0PGT4 (6 bits away from this cluster)

Group of orthologs #1041. Best score 58 bits
Score difference with first non-orthologous sequence - C.variabilis:58 P.jiroveci:58

E1ZLZ4              	100.00%		L0PDY2              	100.00%
E1ZQZ0              	16.03%		
E1ZJV0              	10.23%		
Bootstrap support for E1ZLZ4 as seed ortholog is 100%.
Bootstrap support for L0PDY2 as seed ortholog is 100%.

Group of orthologs #1042. Best score 58 bits
Score difference with first non-orthologous sequence - C.variabilis:58 P.jiroveci:58

E1ZHU2              	100.00%		L0PFQ0              	100.00%
E1Z1Z3              	23.57%		
Bootstrap support for E1ZHU2 as seed ortholog is 100%.
Bootstrap support for L0PFQ0 as seed ortholog is 100%.

Group of orthologs #1043. Best score 57 bits
Score difference with first non-orthologous sequence - C.variabilis:15 P.jiroveci:57

E1ZEE7              	100.00%		L0P8Q3              	100.00%
E1ZSH2              	5.83%		
E1ZQ53              	5.18%		
Bootstrap support for E1ZEE7 as seed ortholog is 74%.
Alternative seed ortholog is E1ZRD0 (15 bits away from this cluster)
Bootstrap support for L0P8Q3 as seed ortholog is 100%.

Group of orthologs #1044. Best score 57 bits
Score difference with first non-orthologous sequence - C.variabilis:57 P.jiroveci:57

F2YGM7              	100.00%		L0P8D1              	100.00%
E1ZUF2              	9.16%		
Bootstrap support for F2YGM7 as seed ortholog is 100%.
Bootstrap support for L0P8D1 as seed ortholog is 100%.

Group of orthologs #1045. Best score 57 bits
Score difference with first non-orthologous sequence - C.variabilis:57 P.jiroveci:57

E1Z7M6              	100.00%		L0PAE4              	100.00%
Bootstrap support for E1Z7M6 as seed ortholog is 100%.
Bootstrap support for L0PAE4 as seed ortholog is 100%.

Group of orthologs #1046. Best score 57 bits
Score difference with first non-orthologous sequence - C.variabilis:57 P.jiroveci:57

E1ZJ39              	100.00%		L0PE16              	100.00%
Bootstrap support for E1ZJ39 as seed ortholog is 100%.
Bootstrap support for L0PE16 as seed ortholog is 100%.

Group of orthologs #1047. Best score 57 bits
Score difference with first non-orthologous sequence - C.variabilis:57 P.jiroveci:57

E1ZK87              	100.00%		L0PE69              	100.00%
Bootstrap support for E1ZK87 as seed ortholog is 100%.
Bootstrap support for L0PE69 as seed ortholog is 100%.

Group of orthologs #1048. Best score 56 bits
Score difference with first non-orthologous sequence - C.variabilis:56 P.jiroveci:56

E1Z616              	100.00%		L0PCT2              	100.00%
Bootstrap support for E1Z616 as seed ortholog is 100%.
Bootstrap support for L0PCT2 as seed ortholog is 100%.

Group of orthologs #1049. Best score 56 bits
Score difference with first non-orthologous sequence - C.variabilis:56 P.jiroveci:56

E1Z8P6              	100.00%		L0PAW0              	100.00%
Bootstrap support for E1Z8P6 as seed ortholog is 100%.
Bootstrap support for L0PAW0 as seed ortholog is 100%.

Group of orthologs #1050. Best score 56 bits
Score difference with first non-orthologous sequence - C.variabilis:56 P.jiroveci:56

E1ZC20              	100.00%		L0PAV1              	100.00%
Bootstrap support for E1ZC20 as seed ortholog is 100%.
Bootstrap support for L0PAV1 as seed ortholog is 100%.

Group of orthologs #1051. Best score 55 bits
Score difference with first non-orthologous sequence - C.variabilis:55 P.jiroveci:55

E1Z508              	100.00%		L0PB29              	100.00%
Bootstrap support for E1Z508 as seed ortholog is 100%.
Bootstrap support for L0PB29 as seed ortholog is 100%.

Group of orthologs #1052. Best score 55 bits
Score difference with first non-orthologous sequence - C.variabilis:55 P.jiroveci:55

E1Z3T6              	100.00%		L0PFI4              	100.00%
Bootstrap support for E1Z3T6 as seed ortholog is 100%.
Bootstrap support for L0PFI4 as seed ortholog is 100%.

Group of orthologs #1053. Best score 55 bits
Score difference with first non-orthologous sequence - C.variabilis:55 P.jiroveci:55

E1ZPP7              	100.00%		L0P7K1              	100.00%
Bootstrap support for E1ZPP7 as seed ortholog is 100%.
Bootstrap support for L0P7K1 as seed ortholog is 100%.

Group of orthologs #1054. Best score 54 bits
Score difference with first non-orthologous sequence - C.variabilis:54 P.jiroveci:54

E1ZD40              	100.00%		L0PB91              	100.00%
Bootstrap support for E1ZD40 as seed ortholog is 100%.
Bootstrap support for L0PB91 as seed ortholog is 100%.

Group of orthologs #1055. Best score 54 bits
Score difference with first non-orthologous sequence - C.variabilis:54 P.jiroveci:54

E1ZEM6              	100.00%		L0P9V1              	100.00%
Bootstrap support for E1ZEM6 as seed ortholog is 100%.
Bootstrap support for L0P9V1 as seed ortholog is 100%.

Group of orthologs #1056. Best score 54 bits
Score difference with first non-orthologous sequence - C.variabilis:54 P.jiroveci:54

E1ZGQ1              	100.00%		L0PEH0              	100.00%
Bootstrap support for E1ZGQ1 as seed ortholog is 100%.
Bootstrap support for L0PEH0 as seed ortholog is 100%.

Group of orthologs #1057. Best score 54 bits
Score difference with first non-orthologous sequence - C.variabilis:54 P.jiroveci:54

E1ZMZ6              	100.00%		L0PAD6              	100.00%
Bootstrap support for E1ZMZ6 as seed ortholog is 100%.
Bootstrap support for L0PAD6 as seed ortholog is 100%.

Group of orthologs #1058. Best score 54 bits
Score difference with first non-orthologous sequence - C.variabilis:54 P.jiroveci:54

E1ZNV8              	100.00%		L0PAI2              	100.00%
Bootstrap support for E1ZNV8 as seed ortholog is 100%.
Bootstrap support for L0PAI2 as seed ortholog is 100%.

Group of orthologs #1059. Best score 54 bits
Score difference with first non-orthologous sequence - C.variabilis:54 P.jiroveci:54

E1ZQK7              	100.00%		L0PBP5              	100.00%
Bootstrap support for E1ZQK7 as seed ortholog is 100%.
Bootstrap support for L0PBP5 as seed ortholog is 100%.

Group of orthologs #1060. Best score 53 bits
Score difference with first non-orthologous sequence - C.variabilis:53 P.jiroveci:53

E1ZMD6              	100.00%		L0PF02              	100.00%
Bootstrap support for E1ZMD6 as seed ortholog is 100%.
Bootstrap support for L0PF02 as seed ortholog is 100%.

Group of orthologs #1061. Best score 52 bits
Score difference with first non-orthologous sequence - C.variabilis:0 P.jiroveci:52

E1ZIQ4              	100.00%		L0P9Y3              	100.00%
                    	       		L0PF70              	5.06%
Bootstrap support for E1ZIQ4 as seed ortholog is 67%.
Alternative seed ortholog is E1ZCY0 (0 bits away from this cluster)
Bootstrap support for L0P9Y3 as seed ortholog is 100%.

Group of orthologs #1062. Best score 52 bits
Score difference with first non-orthologous sequence - C.variabilis:52 P.jiroveci:52

E1ZTS9              	100.00%		L0PD39              	100.00%
Bootstrap support for E1ZTS9 as seed ortholog is 100%.
Bootstrap support for L0PD39 as seed ortholog is 100%.

Group of orthologs #1063. Best score 51 bits
Score difference with first non-orthologous sequence - C.variabilis:51 P.jiroveci:51

E1Z9M9              	100.00%		L0PF86              	100.00%
                    	       		L0PC10              	88.28%
Bootstrap support for E1Z9M9 as seed ortholog is 100%.
Bootstrap support for L0PF86 as seed ortholog is 100%.

Group of orthologs #1064. Best score 51 bits
Score difference with first non-orthologous sequence - C.variabilis:51 P.jiroveci:51

E1ZJZ8              	100.00%		L0PEM9              	100.00%
E1ZIW0              	30.81%		
Bootstrap support for E1ZJZ8 as seed ortholog is 100%.
Bootstrap support for L0PEM9 as seed ortholog is 100%.

Group of orthologs #1065. Best score 51 bits
Score difference with first non-orthologous sequence - C.variabilis:51 P.jiroveci:51

E1ZB76              	100.00%		L0PDQ7              	100.00%
Bootstrap support for E1ZB76 as seed ortholog is 100%.
Bootstrap support for L0PDQ7 as seed ortholog is 100%.

Group of orthologs #1066. Best score 51 bits
Score difference with first non-orthologous sequence - C.variabilis:51 P.jiroveci:51

E1ZGW9              	100.00%		L0PEE9              	100.00%
Bootstrap support for E1ZGW9 as seed ortholog is 100%.
Bootstrap support for L0PEE9 as seed ortholog is 100%.

Group of orthologs #1067. Best score 50 bits
Score difference with first non-orthologous sequence - C.variabilis:50 P.jiroveci:50

E1Z3H8              	100.00%		L0P831              	100.00%
                    	       		L0PDC1              	45.74%
Bootstrap support for E1Z3H8 as seed ortholog is 100%.
Bootstrap support for L0P831 as seed ortholog is 100%.

Group of orthologs #1068. Best score 50 bits
Score difference with first non-orthologous sequence - C.variabilis:50 P.jiroveci:50

E1Z8H0              	100.00%		L0PEV0              	100.00%
Bootstrap support for E1Z8H0 as seed ortholog is 100%.
Bootstrap support for L0PEV0 as seed ortholog is 100%.

Group of orthologs #1069. Best score 49 bits
Score difference with first non-orthologous sequence - C.variabilis:49 P.jiroveci:49

E1Z7K8              	100.00%		L0PD80              	100.00%
Bootstrap support for E1Z7K8 as seed ortholog is 100%.
Bootstrap support for L0PD80 as seed ortholog is 100%.

Group of orthologs #1070. Best score 49 bits
Score difference with first non-orthologous sequence - C.variabilis:49 P.jiroveci:49

E1ZH79              	100.00%		L0PFI5              	100.00%
Bootstrap support for E1ZH79 as seed ortholog is 100%.
Bootstrap support for L0PFI5 as seed ortholog is 100%.

Group of orthologs #1071. Best score 49 bits
Score difference with first non-orthologous sequence - C.variabilis:49 P.jiroveci:49

E1ZTM6              	100.00%		L0P881              	100.00%
Bootstrap support for E1ZTM6 as seed ortholog is 100%.
Bootstrap support for L0P881 as seed ortholog is 100%.

Group of orthologs #1072. Best score 48 bits
Score difference with first non-orthologous sequence - C.variabilis:48 P.jiroveci:48

E1Z7Q6              	100.00%		L0PCK2              	100.00%
E1ZF76              	26.79%		
E1Z8G7              	20.66%		
Bootstrap support for E1Z7Q6 as seed ortholog is 100%.
Bootstrap support for L0PCK2 as seed ortholog is 100%.

Group of orthologs #1073. Best score 48 bits
Score difference with first non-orthologous sequence - C.variabilis:48 P.jiroveci:48

E1Z5Z6              	100.00%		L0PEK1              	100.00%
Bootstrap support for E1Z5Z6 as seed ortholog is 100%.
Bootstrap support for L0PEK1 as seed ortholog is 100%.

Group of orthologs #1074. Best score 48 bits
Score difference with first non-orthologous sequence - C.variabilis:48 P.jiroveci:48

E1Z588              	100.00%		L0PGE9              	100.00%
Bootstrap support for E1Z588 as seed ortholog is 100%.
Bootstrap support for L0PGE9 as seed ortholog is 100%.

Group of orthologs #1075. Best score 48 bits
Score difference with first non-orthologous sequence - C.variabilis:48 P.jiroveci:48

E1ZKM1              	100.00%		L0PAT8              	100.00%
Bootstrap support for E1ZKM1 as seed ortholog is 100%.
Bootstrap support for L0PAT8 as seed ortholog is 100%.

Group of orthologs #1076. Best score 47 bits
Score difference with first non-orthologous sequence - C.variabilis:47 P.jiroveci:47

E1ZT53              	6.17%		L0PC31              	100.00%
E1ZFP2              	100.00%		L0PGG5              	100.00%
E1ZP42              	5.14%		
Bootstrap support for E1ZFP2 as seed ortholog is 100%.
Bootstrap support for L0PC31 as seed ortholog is 100%.
Bootstrap support for L0PGG5 as seed ortholog is 100%.

Group of orthologs #1077. Best score 47 bits
Score difference with first non-orthologous sequence - C.variabilis:47 P.jiroveci:47

E1Z3L2              	100.00%		L0PFX4              	100.00%
E1Z4M6              	6.59%		
Bootstrap support for E1Z3L2 as seed ortholog is 100%.
Bootstrap support for L0PFX4 as seed ortholog is 100%.

Group of orthologs #1078. Best score 47 bits
Score difference with first non-orthologous sequence - C.variabilis:47 P.jiroveci:47

E1ZNA9              	100.00%		L0PCJ4              	100.00%
E1ZND6              	20.95%		
Bootstrap support for E1ZNA9 as seed ortholog is 100%.
Bootstrap support for L0PCJ4 as seed ortholog is 100%.

Group of orthologs #1079. Best score 47 bits
Score difference with first non-orthologous sequence - C.variabilis:47 P.jiroveci:47

E1Z967              	100.00%		L0PBF4              	100.00%
Bootstrap support for E1Z967 as seed ortholog is 100%.
Bootstrap support for L0PBF4 as seed ortholog is 100%.

Group of orthologs #1080. Best score 47 bits
Score difference with first non-orthologous sequence - C.variabilis:47 P.jiroveci:47

E1ZB58              	100.00%		L0P9P6              	100.00%
Bootstrap support for E1ZB58 as seed ortholog is 100%.
Bootstrap support for L0P9P6 as seed ortholog is 100%.

Group of orthologs #1081. Best score 47 bits
Score difference with first non-orthologous sequence - C.variabilis:47 P.jiroveci:47

E1Z8C1              	100.00%		L0PE14              	100.00%
Bootstrap support for E1Z8C1 as seed ortholog is 100%.
Bootstrap support for L0PE14 as seed ortholog is 100%.

Group of orthologs #1082. Best score 47 bits
Score difference with first non-orthologous sequence - C.variabilis:47 P.jiroveci:47

E1ZTV1              	100.00%		L0P954              	100.00%
Bootstrap support for E1ZTV1 as seed ortholog is 100%.
Bootstrap support for L0P954 as seed ortholog is 100%.

Group of orthologs #1083. Best score 47 bits
Score difference with first non-orthologous sequence - C.variabilis:47 P.jiroveci:47

E1ZSX3              	100.00%		L0PBS8              	100.00%
Bootstrap support for E1ZSX3 as seed ortholog is 100%.
Bootstrap support for L0PBS8 as seed ortholog is 100%.

Group of orthologs #1084. Best score 46 bits
Score difference with first non-orthologous sequence - C.variabilis:46 P.jiroveci:46

E1ZD88              	100.00%		L0PEM7              	100.00%
E1ZHZ1              	8.04%		
E1Z5X4              	6.62%		
Bootstrap support for E1ZD88 as seed ortholog is 100%.
Bootstrap support for L0PEM7 as seed ortholog is 100%.

Group of orthologs #1085. Best score 46 bits
Score difference with first non-orthologous sequence - C.variabilis:46 P.jiroveci:46

E1ZPN1              	100.00%		L0P9K3              	100.00%
Bootstrap support for E1ZPN1 as seed ortholog is 100%.
Bootstrap support for L0P9K3 as seed ortholog is 100%.

Group of orthologs #1086. Best score 45 bits
Score difference with first non-orthologous sequence - C.variabilis:45 P.jiroveci:45

E1Z2A6              	100.00%		L0PC78              	100.00%
Bootstrap support for E1Z2A6 as seed ortholog is 100%.
Bootstrap support for L0PC78 as seed ortholog is 100%.

Group of orthologs #1087. Best score 45 bits
Score difference with first non-orthologous sequence - C.variabilis:45 P.jiroveci:45

E1Z323              	100.00%		L0PFH8              	100.00%
Bootstrap support for E1Z323 as seed ortholog is 100%.
Bootstrap support for L0PFH8 as seed ortholog is 100%.

Group of orthologs #1088. Best score 45 bits
Score difference with first non-orthologous sequence - C.variabilis:45 P.jiroveci:45

E1ZIM4              	100.00%		L0PE87              	100.00%
Bootstrap support for E1ZIM4 as seed ortholog is 100%.
Bootstrap support for L0PE87 as seed ortholog is 100%.

Group of orthologs #1089. Best score 45 bits
Score difference with first non-orthologous sequence - C.variabilis:45 P.jiroveci:45

E1ZGY6              	100.00%		L0PGE4              	100.00%
Bootstrap support for E1ZGY6 as seed ortholog is 100%.
Bootstrap support for L0PGE4 as seed ortholog is 100%.

Group of orthologs #1090. Best score 45 bits
Score difference with first non-orthologous sequence - C.variabilis:45 P.jiroveci:45

F2YGP1              	100.00%		L0PA12              	100.00%
Bootstrap support for F2YGP1 as seed ortholog is 100%.
Bootstrap support for L0PA12 as seed ortholog is 100%.

Group of orthologs #1091. Best score 44 bits
Score difference with first non-orthologous sequence - C.variabilis:44 P.jiroveci:44

E1ZCQ2              	100.00%		L0P883              	100.00%
Bootstrap support for E1ZCQ2 as seed ortholog is 100%.
Bootstrap support for L0P883 as seed ortholog is 100%.

Group of orthologs #1092. Best score 43 bits
Score difference with first non-orthologous sequence - C.variabilis:43 P.jiroveci:43

E1ZFQ6              	100.00%		L0P8A9              	100.00%
Bootstrap support for E1ZFQ6 as seed ortholog is 100%.
Bootstrap support for L0P8A9 as seed ortholog is 100%.

Group of orthologs #1093. Best score 42 bits
Score difference with first non-orthologous sequence - C.variabilis:42 P.jiroveci:42

E1ZDK6              	100.00%		L0P8E1              	100.00%
Bootstrap support for E1ZDK6 as seed ortholog is 100%.
Bootstrap support for L0P8E1 as seed ortholog is 100%.