###################################
1779 groups of orthologs
2155 in-paralogs from C.reinhardtii
2121 in-paralogs from P.pallidum
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3425 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3425 P.pallidum:3425

A8HPL0              	100.00%		D3BFM8              	100.00%
Bootstrap support for A8HPL0 as seed ortholog is 100%.
Bootstrap support for D3BFM8 as seed ortholog is 100%.

Group of orthologs #2. Best score 2062 bits
Score difference with first non-orthologous sequence - C.reinhardtii:2062 P.pallidum:711

A8JI25              	100.00%		D3BVM0              	100.00%
Bootstrap support for A8JI25 as seed ortholog is 100%.
Bootstrap support for D3BVM0 as seed ortholog is 100%.

Group of orthologs #3. Best score 1797 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1797 P.pallidum:1797

A8IRZ2              	100.00%		D3BJK4              	100.00%
Bootstrap support for A8IRZ2 as seed ortholog is 100%.
Bootstrap support for D3BJK4 as seed ortholog is 100%.

Group of orthologs #4. Best score 1581 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1581 P.pallidum:1581

A8I4S9              	100.00%		D3BNB1              	100.00%
Bootstrap support for A8I4S9 as seed ortholog is 100%.
Bootstrap support for D3BNB1 as seed ortholog is 100%.

Group of orthologs #5. Best score 1566 bits
Score difference with first non-orthologous sequence - C.reinhardtii:12 P.pallidum:1566

A8JHU7              	100.00%		D3BP40              	100.00%
A8IUF0              	12.16%		
A8J1M5              	9.94%		
A8J063              	7.57%		
A8I5C3              	7.40%		
A8I3X6              	6.88%		
A8ISA6              	6.15%		
A8IV22              	5.70%		
A8IYR9              	5.32%		
A8J336              	5.10%		
Bootstrap support for A8JHU7 as seed ortholog is 50%.
Alternative seed ortholog is Q9SMH5 (12 bits away from this cluster)
Bootstrap support for D3BP40 as seed ortholog is 100%.

Group of orthologs #6. Best score 1482 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1482 P.pallidum:1482

A8HYR2              	100.00%		D3BM55              	100.00%
Bootstrap support for A8HYR2 as seed ortholog is 100%.
Bootstrap support for D3BM55 as seed ortholog is 100%.

Group of orthologs #7. Best score 1406 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1406 P.pallidum:1406

A8J3Y6              	100.00%		D3BTI9              	100.00%
Bootstrap support for A8J3Y6 as seed ortholog is 100%.
Bootstrap support for D3BTI9 as seed ortholog is 100%.

Group of orthologs #8. Best score 1377 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1377 P.pallidum:1377

A8IFY3              	100.00%		D3B0N0              	100.00%
Bootstrap support for A8IFY3 as seed ortholog is 100%.
Bootstrap support for D3B0N0 as seed ortholog is 100%.

Group of orthologs #9. Best score 1321 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1321 P.pallidum:1321

A8IY03              	100.00%		D3B936              	100.00%
Bootstrap support for A8IY03 as seed ortholog is 100%.
Bootstrap support for D3B936 as seed ortholog is 100%.

Group of orthologs #10. Best score 1309 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1309 P.pallidum:1309

A8I9Z6              	100.00%		D3BHD6              	100.00%
Bootstrap support for A8I9Z6 as seed ortholog is 100%.
Bootstrap support for D3BHD6 as seed ortholog is 100%.

Group of orthologs #11. Best score 1282 bits
Score difference with first non-orthologous sequence - C.reinhardtii:865 P.pallidum:810

A8HW56              	100.00%		D3BIX9              	100.00%
Bootstrap support for A8HW56 as seed ortholog is 100%.
Bootstrap support for D3BIX9 as seed ortholog is 100%.

Group of orthologs #12. Best score 1210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1210 P.pallidum:1098

A8J9F3              	100.00%		D3BUX1              	100.00%
Bootstrap support for A8J9F3 as seed ortholog is 100%.
Bootstrap support for D3BUX1 as seed ortholog is 100%.

Group of orthologs #13. Best score 1145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1145 P.pallidum:1145

A8JH01              	100.00%		D3BLR5              	100.00%
Bootstrap support for A8JH01 as seed ortholog is 100%.
Bootstrap support for D3BLR5 as seed ortholog is 100%.

Group of orthologs #14. Best score 1131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1131 P.pallidum:1131

A8IDG4              	100.00%		D3BMV7              	100.00%
Bootstrap support for A8IDG4 as seed ortholog is 100%.
Bootstrap support for D3BMV7 as seed ortholog is 100%.

Group of orthologs #15. Best score 1126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1126 P.pallidum:1126

A8HRR9              	100.00%		D3B3V5              	100.00%
Bootstrap support for A8HRR9 as seed ortholog is 100%.
Bootstrap support for D3B3V5 as seed ortholog is 100%.

Group of orthologs #16. Best score 1106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1106 P.pallidum:1106

A8IVM9              	100.00%		D3AWX9              	100.00%
Bootstrap support for A8IVM9 as seed ortholog is 100%.
Bootstrap support for D3AWX9 as seed ortholog is 100%.

Group of orthologs #17. Best score 1098 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1098 P.pallidum:172

A8JD08              	100.00%		D3B7U7              	100.00%
Bootstrap support for A8JD08 as seed ortholog is 100%.
Bootstrap support for D3B7U7 as seed ortholog is 98%.

Group of orthologs #18. Best score 1078 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1078 P.pallidum:1078

A8IY70              	100.00%		D3BKT1              	100.00%
Bootstrap support for A8IY70 as seed ortholog is 100%.
Bootstrap support for D3BKT1 as seed ortholog is 100%.

Group of orthologs #19. Best score 1068 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1068 P.pallidum:864

A8HMQ1              	100.00%		D3BTY9              	100.00%
Bootstrap support for A8HMQ1 as seed ortholog is 100%.
Bootstrap support for D3BTY9 as seed ortholog is 100%.

Group of orthologs #20. Best score 1068 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1068 P.pallidum:1068

A8J7V3              	100.00%		D3BLH3              	100.00%
Bootstrap support for A8J7V3 as seed ortholog is 100%.
Bootstrap support for D3BLH3 as seed ortholog is 100%.

Group of orthologs #21. Best score 1055 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1055 P.pallidum:1055

A8JDR3              	100.00%		D3BIF3              	100.00%
Bootstrap support for A8JDR3 as seed ortholog is 100%.
Bootstrap support for D3BIF3 as seed ortholog is 100%.

Group of orthologs #22. Best score 1042 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1042 P.pallidum:1042

A8JCP5              	100.00%		D3B599              	100.00%
Bootstrap support for A8JCP5 as seed ortholog is 100%.
Bootstrap support for D3B599 as seed ortholog is 100%.

Group of orthologs #23. Best score 1031 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1031 P.pallidum:233

A8JHX9              	100.00%		D3BU68              	100.00%
Bootstrap support for A8JHX9 as seed ortholog is 100%.
Bootstrap support for D3BU68 as seed ortholog is 99%.

Group of orthologs #24. Best score 1019 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1019 P.pallidum:334

A8IVG0              	100.00%		D3B6X4              	100.00%
Bootstrap support for A8IVG0 as seed ortholog is 100%.
Bootstrap support for D3B6X4 as seed ortholog is 100%.

Group of orthologs #25. Best score 1012 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1012 P.pallidum:523

A8JCA8              	100.00%		D3BFQ2              	100.00%
Bootstrap support for A8JCA8 as seed ortholog is 100%.
Bootstrap support for D3BFQ2 as seed ortholog is 100%.

Group of orthologs #26. Best score 993 bits
Score difference with first non-orthologous sequence - C.reinhardtii:365 P.pallidum:391

A8J1U1              	100.00%		D3BEQ3              	100.00%
Bootstrap support for A8J1U1 as seed ortholog is 100%.
Bootstrap support for D3BEQ3 as seed ortholog is 100%.

Group of orthologs #27. Best score 981 bits
Score difference with first non-orthologous sequence - C.reinhardtii:981 P.pallidum:981

A8JGS8              	100.00%		D3BD99              	100.00%
Bootstrap support for A8JGS8 as seed ortholog is 100%.
Bootstrap support for D3BD99 as seed ortholog is 100%.

Group of orthologs #28. Best score 978 bits
Score difference with first non-orthologous sequence - C.reinhardtii:134 P.pallidum:55

A8IYK1              	100.00%		D3AYA7              	100.00%
Bootstrap support for A8IYK1 as seed ortholog is 99%.
Bootstrap support for D3AYA7 as seed ortholog is 84%.

Group of orthologs #29. Best score 976 bits
Score difference with first non-orthologous sequence - C.reinhardtii:976 P.pallidum:860

A8J2W2              	100.00%		D3BG39              	100.00%
Bootstrap support for A8J2W2 as seed ortholog is 100%.
Bootstrap support for D3BG39 as seed ortholog is 100%.

Group of orthologs #30. Best score 952 bits
Score difference with first non-orthologous sequence - C.reinhardtii:390 P.pallidum:618

A8JEU4              	100.00%		D3B545              	100.00%
                    	       		D3AVQ2              	44.25%
Bootstrap support for A8JEU4 as seed ortholog is 100%.
Bootstrap support for D3B545 as seed ortholog is 100%.

Group of orthologs #31. Best score 946 bits
Score difference with first non-orthologous sequence - C.reinhardtii:946 P.pallidum:653

A8IK98              	100.00%		D3B1P3              	100.00%
Bootstrap support for A8IK98 as seed ortholog is 100%.
Bootstrap support for D3B1P3 as seed ortholog is 100%.

Group of orthologs #32. Best score 942 bits
Score difference with first non-orthologous sequence - C.reinhardtii:705 P.pallidum:699

A8J6M5              	100.00%		D3BQN9              	100.00%
A8J6M4              	74.73%		D3B2N2              	61.48%
                    	       		D3BQP1              	40.40%
                    	       		D3B9D6              	19.09%
Bootstrap support for A8J6M5 as seed ortholog is 100%.
Bootstrap support for D3BQN9 as seed ortholog is 100%.

Group of orthologs #33. Best score 928 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 P.pallidum:232

A8JA18              	100.00%		D3BG38              	100.00%
Bootstrap support for A8JA18 as seed ortholog is 90%.
Bootstrap support for D3BG38 as seed ortholog is 100%.

Group of orthologs #34. Best score 865 bits
Score difference with first non-orthologous sequence - C.reinhardtii:812 P.pallidum:865

A8JDQ4              	100.00%		D3BDE5              	100.00%
Bootstrap support for A8JDQ4 as seed ortholog is 100%.
Bootstrap support for D3BDE5 as seed ortholog is 100%.

Group of orthologs #35. Best score 859 bits
Score difference with first non-orthologous sequence - C.reinhardtii:859 P.pallidum:695

A8HZ23              	100.00%		D3B350              	100.00%
Bootstrap support for A8HZ23 as seed ortholog is 100%.
Bootstrap support for D3B350 as seed ortholog is 100%.

Group of orthologs #36. Best score 854 bits
Score difference with first non-orthologous sequence - C.reinhardtii:854 P.pallidum:854

A8J568              	100.00%		D3BS87              	100.00%
Bootstrap support for A8J568 as seed ortholog is 100%.
Bootstrap support for D3BS87 as seed ortholog is 100%.

Group of orthologs #37. Best score 845 bits
Score difference with first non-orthologous sequence - C.reinhardtii:172 P.pallidum:83

A8IE86              	100.00%		D3B5K6              	100.00%
Bootstrap support for A8IE86 as seed ortholog is 99%.
Bootstrap support for D3B5K6 as seed ortholog is 100%.

Group of orthologs #38. Best score 844 bits
Score difference with first non-orthologous sequence - C.reinhardtii:844 P.pallidum:844

A8IWF9              	100.00%		D3B5A9              	100.00%
Bootstrap support for A8IWF9 as seed ortholog is 100%.
Bootstrap support for D3B5A9 as seed ortholog is 100%.

Group of orthologs #39. Best score 839 bits
Score difference with first non-orthologous sequence - C.reinhardtii:839 P.pallidum:839

A8IRW5              	100.00%		D3BP16              	100.00%
Bootstrap support for A8IRW5 as seed ortholog is 100%.
Bootstrap support for D3BP16 as seed ortholog is 100%.

Group of orthologs #40. Best score 832 bits
Score difference with first non-orthologous sequence - C.reinhardtii:285 P.pallidum:832

A8I7T8              	100.00%		D3BE43              	100.00%
A8I7S9              	71.06%		
Bootstrap support for A8I7T8 as seed ortholog is 100%.
Bootstrap support for D3BE43 as seed ortholog is 100%.

Group of orthologs #41. Best score 824 bits
Score difference with first non-orthologous sequence - C.reinhardtii:824 P.pallidum:589

A8I9D7              	100.00%		D3B244              	100.00%
Bootstrap support for A8I9D7 as seed ortholog is 100%.
Bootstrap support for D3B244 as seed ortholog is 100%.

Group of orthologs #42. Best score 819 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.pallidum:178

A8IVJ6              	100.00%		D3AX78              	100.00%
A8IVJ3              	35.01%		D3BVP5              	10.25%
Bootstrap support for A8IVJ6 as seed ortholog is 81%.
Bootstrap support for D3AX78 as seed ortholog is 99%.

Group of orthologs #43. Best score 815 bits
Score difference with first non-orthologous sequence - C.reinhardtii:519 P.pallidum:815

A8IH85              	100.00%		D3BM68              	100.00%
Bootstrap support for A8IH85 as seed ortholog is 100%.
Bootstrap support for D3BM68 as seed ortholog is 100%.

Group of orthologs #44. Best score 811 bits
Score difference with first non-orthologous sequence - C.reinhardtii:811 P.pallidum:811

A8IM71              	100.00%		D3BBR7              	100.00%
Bootstrap support for A8IM71 as seed ortholog is 100%.
Bootstrap support for D3BBR7 as seed ortholog is 100%.

Group of orthologs #45. Best score 804 bits
Score difference with first non-orthologous sequence - C.reinhardtii:691 P.pallidum:804

A8I164              	100.00%		D3B700              	100.00%
Bootstrap support for A8I164 as seed ortholog is 100%.
Bootstrap support for D3B700 as seed ortholog is 100%.

Group of orthologs #46. Best score 802 bits
Score difference with first non-orthologous sequence - C.reinhardtii:802 P.pallidum:802

A8I8N8              	100.00%		D3BQ59              	100.00%
Bootstrap support for A8I8N8 as seed ortholog is 100%.
Bootstrap support for D3BQ59 as seed ortholog is 100%.

Group of orthologs #47. Best score 799 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 P.pallidum:126

A8HRK2              	100.00%		D3BGW1              	100.00%
                    	       		D3B193              	35.53%
Bootstrap support for A8HRK2 as seed ortholog is 99%.
Bootstrap support for D3BGW1 as seed ortholog is 97%.

Group of orthologs #48. Best score 797 bits
Score difference with first non-orthologous sequence - C.reinhardtii:797 P.pallidum:797

A8J6S7              	100.00%		D3BQY0              	100.00%
Bootstrap support for A8J6S7 as seed ortholog is 100%.
Bootstrap support for D3BQY0 as seed ortholog is 100%.

Group of orthologs #49. Best score 790 bits
Score difference with first non-orthologous sequence - C.reinhardtii:790 P.pallidum:227

A8J1C1              	100.00%		D3BPX4              	100.00%
Bootstrap support for A8J1C1 as seed ortholog is 100%.
Bootstrap support for D3BPX4 as seed ortholog is 99%.

Group of orthologs #50. Best score 790 bits
Score difference with first non-orthologous sequence - C.reinhardtii:670 P.pallidum:676

A8JI26              	100.00%		D3BEG0              	100.00%
Bootstrap support for A8JI26 as seed ortholog is 100%.
Bootstrap support for D3BEG0 as seed ortholog is 100%.

Group of orthologs #51. Best score 772 bits
Score difference with first non-orthologous sequence - C.reinhardtii:772 P.pallidum:772

A8J3A4              	100.00%		D3B684              	100.00%
Bootstrap support for A8J3A4 as seed ortholog is 100%.
Bootstrap support for D3B684 as seed ortholog is 100%.

Group of orthologs #52. Best score 766 bits
Score difference with first non-orthologous sequence - C.reinhardtii:766 P.pallidum:766

A8IUN1              	100.00%		D3BH29              	100.00%
Bootstrap support for A8IUN1 as seed ortholog is 100%.
Bootstrap support for D3BH29 as seed ortholog is 100%.

Group of orthologs #53. Best score 765 bits
Score difference with first non-orthologous sequence - C.reinhardtii:683 P.pallidum:765

A8IUL6              	100.00%		D3B3X9              	100.00%
Bootstrap support for A8IUL6 as seed ortholog is 100%.
Bootstrap support for D3B3X9 as seed ortholog is 100%.

Group of orthologs #54. Best score 757 bits
Score difference with first non-orthologous sequence - C.reinhardtii:757 P.pallidum:757

A8JHA4              	100.00%		D3B3L3              	100.00%
Bootstrap support for A8JHA4 as seed ortholog is 100%.
Bootstrap support for D3B3L3 as seed ortholog is 100%.

Group of orthologs #55. Best score 751 bits
Score difference with first non-orthologous sequence - C.reinhardtii:681 P.pallidum:544

A8J7J2              	100.00%		D3BFC6              	100.00%
Bootstrap support for A8J7J2 as seed ortholog is 100%.
Bootstrap support for D3BFC6 as seed ortholog is 100%.

Group of orthologs #56. Best score 743 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.pallidum:743

A8IZU0              	100.00%		D3AY31              	100.00%
Bootstrap support for A8IZU0 as seed ortholog is 99%.
Bootstrap support for D3AY31 as seed ortholog is 100%.

Group of orthologs #57. Best score 742 bits
Score difference with first non-orthologous sequence - C.reinhardtii:354 P.pallidum:88

A8IJV9              	100.00%		D3BG47              	100.00%
A8IZL7              	37.34%		D3BT92              	5.83%
A8IS11              	30.39%		
A8J0V2              	24.30%		
Bootstrap support for A8IJV9 as seed ortholog is 100%.
Bootstrap support for D3BG47 as seed ortholog is 91%.

Group of orthologs #58. Best score 742 bits
Score difference with first non-orthologous sequence - C.reinhardtii:742 P.pallidum:742

A8IG58              	100.00%		D3BEN7              	100.00%
Bootstrap support for A8IG58 as seed ortholog is 100%.
Bootstrap support for D3BEN7 as seed ortholog is 100%.

Group of orthologs #59. Best score 742 bits
Score difference with first non-orthologous sequence - C.reinhardtii:742 P.pallidum:742

A8JC00              	100.00%		D3BEZ7              	100.00%
Bootstrap support for A8JC00 as seed ortholog is 100%.
Bootstrap support for D3BEZ7 as seed ortholog is 100%.

Group of orthologs #60. Best score 737 bits
Score difference with first non-orthologous sequence - C.reinhardtii:613 P.pallidum:737

A8IA45              	100.00%		D3B5K2              	100.00%
Bootstrap support for A8IA45 as seed ortholog is 100%.
Bootstrap support for D3B5K2 as seed ortholog is 100%.

Group of orthologs #61. Best score 734 bits
Score difference with first non-orthologous sequence - C.reinhardtii:734 P.pallidum:734

A8JEP9              	100.00%		D3BC39              	100.00%
Bootstrap support for A8JEP9 as seed ortholog is 100%.
Bootstrap support for D3BC39 as seed ortholog is 100%.

Group of orthologs #62. Best score 730 bits
Score difference with first non-orthologous sequence - C.reinhardtii:730 P.pallidum:730

A8I8Y6              	100.00%		D3BK67              	100.00%
Bootstrap support for A8I8Y6 as seed ortholog is 100%.
Bootstrap support for D3BK67 as seed ortholog is 100%.

Group of orthologs #63. Best score 727 bits
Score difference with first non-orthologous sequence - C.reinhardtii:727 P.pallidum:727

A8IFE0              	100.00%		D3BKC8              	100.00%
Bootstrap support for A8IFE0 as seed ortholog is 100%.
Bootstrap support for D3BKC8 as seed ortholog is 100%.

Group of orthologs #64. Best score 716 bits
Score difference with first non-orthologous sequence - C.reinhardtii:239 P.pallidum:444

A8J0R6              	100.00%		D3B7Q7              	100.00%
Bootstrap support for A8J0R6 as seed ortholog is 99%.
Bootstrap support for D3B7Q7 as seed ortholog is 100%.

Group of orthologs #65. Best score 706 bits
Score difference with first non-orthologous sequence - C.reinhardtii:706 P.pallidum:706

A8JGB2              	100.00%		D3BB51              	100.00%
Bootstrap support for A8JGB2 as seed ortholog is 100%.
Bootstrap support for D3BB51 as seed ortholog is 100%.

Group of orthologs #66. Best score 705 bits
Score difference with first non-orthologous sequence - C.reinhardtii:423 P.pallidum:705

A8IXZ0              	100.00%		D3BQW2              	100.00%
Bootstrap support for A8IXZ0 as seed ortholog is 100%.
Bootstrap support for D3BQW2 as seed ortholog is 100%.

Group of orthologs #67. Best score 704 bits
Score difference with first non-orthologous sequence - C.reinhardtii:358 P.pallidum:380

A8HX15              	100.00%		D3BBA2              	100.00%
                    	       		D3BNB3              	12.85%
Bootstrap support for A8HX15 as seed ortholog is 100%.
Bootstrap support for D3BBA2 as seed ortholog is 100%.

Group of orthologs #68. Best score 704 bits
Score difference with first non-orthologous sequence - C.reinhardtii:235 P.pallidum:387

A8I7H0              	100.00%		D3BHJ6              	100.00%
Bootstrap support for A8I7H0 as seed ortholog is 99%.
Bootstrap support for D3BHJ6 as seed ortholog is 100%.

Group of orthologs #69. Best score 702 bits
Score difference with first non-orthologous sequence - C.reinhardtii:462 P.pallidum:702

Q540H1              	100.00%		D3AWD2              	100.00%
                    	       		D3BGV6              	55.56%
Bootstrap support for Q540H1 as seed ortholog is 100%.
Bootstrap support for D3AWD2 as seed ortholog is 100%.

Group of orthologs #70. Best score 702 bits
Score difference with first non-orthologous sequence - C.reinhardtii:616 P.pallidum:503

A8HQ74              	100.00%		D3BPJ6              	100.00%
Bootstrap support for A8HQ74 as seed ortholog is 100%.
Bootstrap support for D3BPJ6 as seed ortholog is 100%.

Group of orthologs #71. Best score 698 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 P.pallidum:164

A8JAV1              	100.00%		D3B2M1              	100.00%
                    	       		D3BD07              	96.72%
                    	       		D3BM82              	81.97%
                    	       		D3BSX0              	77.05%
Bootstrap support for A8JAV1 as seed ortholog is 100%.
Bootstrap support for D3B2M1 as seed ortholog is 100%.

Group of orthologs #72. Best score 698 bits
Score difference with first non-orthologous sequence - C.reinhardtii:698 P.pallidum:698

A8IVW3              	100.00%		D3BRS6              	100.00%
Bootstrap support for A8IVW3 as seed ortholog is 100%.
Bootstrap support for D3BRS6 as seed ortholog is 100%.

Group of orthologs #73. Best score 697 bits
Score difference with first non-orthologous sequence - C.reinhardtii:697 P.pallidum:697

A8ICJ1              	100.00%		D3BLC0              	100.00%
Bootstrap support for A8ICJ1 as seed ortholog is 100%.
Bootstrap support for D3BLC0 as seed ortholog is 100%.

Group of orthologs #74. Best score 697 bits
Score difference with first non-orthologous sequence - C.reinhardtii:402 P.pallidum:448

A8JCF0              	100.00%		D3BMR9              	100.00%
Bootstrap support for A8JCF0 as seed ortholog is 100%.
Bootstrap support for D3BMR9 as seed ortholog is 100%.

Group of orthologs #75. Best score 696 bits
Score difference with first non-orthologous sequence - C.reinhardtii:696 P.pallidum:173

A8J8K0              	100.00%		D3BV03              	100.00%
Bootstrap support for A8J8K0 as seed ortholog is 100%.
Bootstrap support for D3BV03 as seed ortholog is 98%.

Group of orthologs #76. Best score 693 bits
Score difference with first non-orthologous sequence - C.reinhardtii:693 P.pallidum:693

A8IEL6              	100.00%		D3B1K5              	100.00%
Bootstrap support for A8IEL6 as seed ortholog is 100%.
Bootstrap support for D3B1K5 as seed ortholog is 100%.

Group of orthologs #77. Best score 692 bits
Score difference with first non-orthologous sequence - C.reinhardtii:692 P.pallidum:692

A8IHX1              	100.00%		D3BPV1              	100.00%
A8HW52              	65.84%		
A8J2H1              	5.41%		
Bootstrap support for A8IHX1 as seed ortholog is 100%.
Bootstrap support for D3BPV1 as seed ortholog is 100%.

Group of orthologs #78. Best score 691 bits
Score difference with first non-orthologous sequence - C.reinhardtii:691 P.pallidum:691

A8I8X8              	100.00%		D3BQ18              	100.00%
Bootstrap support for A8I8X8 as seed ortholog is 100%.
Bootstrap support for D3BQ18 as seed ortholog is 100%.

Group of orthologs #79. Best score 691 bits
Score difference with first non-orthologous sequence - C.reinhardtii:521 P.pallidum:371

A8IV67              	100.00%		D3BIZ6              	100.00%
Bootstrap support for A8IV67 as seed ortholog is 100%.
Bootstrap support for D3BIZ6 as seed ortholog is 100%.

Group of orthologs #80. Best score 690 bits
Score difference with first non-orthologous sequence - C.reinhardtii:690 P.pallidum:690

A8HW07              	100.00%		D3B1M4              	100.00%
Bootstrap support for A8HW07 as seed ortholog is 100%.
Bootstrap support for D3B1M4 as seed ortholog is 100%.

Group of orthologs #81. Best score 687 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 P.pallidum:445

Q93Z22              	100.00%		D3AZS5              	100.00%
Bootstrap support for Q93Z22 as seed ortholog is 99%.
Bootstrap support for D3AZS5 as seed ortholog is 100%.

Group of orthologs #82. Best score 686 bits
Score difference with first non-orthologous sequence - C.reinhardtii:686 P.pallidum:554

A8JAG5              	100.00%		D3B8D9              	100.00%
Bootstrap support for A8JAG5 as seed ortholog is 100%.
Bootstrap support for D3B8D9 as seed ortholog is 100%.

Group of orthologs #83. Best score 683 bits
Score difference with first non-orthologous sequence - C.reinhardtii:683 P.pallidum:450

A8JH46              	100.00%		D3AW74              	100.00%
Bootstrap support for A8JH46 as seed ortholog is 100%.
Bootstrap support for D3AW74 as seed ortholog is 100%.

Group of orthologs #84. Best score 681 bits
Score difference with first non-orthologous sequence - C.reinhardtii:597 P.pallidum:473

A8IIP9              	100.00%		D3BCV5              	100.00%
Bootstrap support for A8IIP9 as seed ortholog is 100%.
Bootstrap support for D3BCV5 as seed ortholog is 100%.

Group of orthologs #85. Best score 680 bits
Score difference with first non-orthologous sequence - C.reinhardtii:680 P.pallidum:680

A8INS0              	100.00%		D3B0U2              	100.00%
Bootstrap support for A8INS0 as seed ortholog is 100%.
Bootstrap support for D3B0U2 as seed ortholog is 100%.

Group of orthologs #86. Best score 680 bits
Score difference with first non-orthologous sequence - C.reinhardtii:680 P.pallidum:680

A8IDE6              	100.00%		D3BPD1              	100.00%
Bootstrap support for A8IDE6 as seed ortholog is 100%.
Bootstrap support for D3BPD1 as seed ortholog is 100%.

Group of orthologs #87. Best score 678 bits
Score difference with first non-orthologous sequence - C.reinhardtii:678 P.pallidum:678

A8J3N8              	100.00%		D3AZW1              	100.00%
Bootstrap support for A8J3N8 as seed ortholog is 100%.
Bootstrap support for D3AZW1 as seed ortholog is 100%.

Group of orthologs #88. Best score 676 bits
Score difference with first non-orthologous sequence - C.reinhardtii:676 P.pallidum:676

A8J0N7              	100.00%		D3BIJ3              	100.00%
Bootstrap support for A8J0N7 as seed ortholog is 100%.
Bootstrap support for D3BIJ3 as seed ortholog is 100%.

Group of orthologs #89. Best score 673 bits
Score difference with first non-orthologous sequence - C.reinhardtii:618 P.pallidum:238

A8I232              	100.00%		D3B255              	100.00%
Bootstrap support for A8I232 as seed ortholog is 100%.
Bootstrap support for D3B255 as seed ortholog is 100%.

Group of orthologs #90. Best score 670 bits
Score difference with first non-orthologous sequence - C.reinhardtii:570 P.pallidum:269

A8JCQ8              	100.00%		D3B6W7              	100.00%
A8JCV8              	27.09%		
A8JFR9              	21.01%		
Bootstrap support for A8JCQ8 as seed ortholog is 100%.
Bootstrap support for D3B6W7 as seed ortholog is 99%.

Group of orthologs #91. Best score 670 bits
Score difference with first non-orthologous sequence - C.reinhardtii:431 P.pallidum:459

A8JC09              	100.00%		D3BFH7              	100.00%
Bootstrap support for A8JC09 as seed ortholog is 100%.
Bootstrap support for D3BFH7 as seed ortholog is 100%.

Group of orthologs #92. Best score 669 bits
Score difference with first non-orthologous sequence - C.reinhardtii:669 P.pallidum:669

A8J4W8              	100.00%		D3BI12              	100.00%
Bootstrap support for A8J4W8 as seed ortholog is 100%.
Bootstrap support for D3BI12 as seed ortholog is 100%.

Group of orthologs #93. Best score 662 bits
Score difference with first non-orthologous sequence - C.reinhardtii:475 P.pallidum:284

A8IHB3              	100.00%		D3B6W8              	100.00%
Bootstrap support for A8IHB3 as seed ortholog is 100%.
Bootstrap support for D3B6W8 as seed ortholog is 100%.

Group of orthologs #94. Best score 659 bits
Score difference with first non-orthologous sequence - C.reinhardtii:659 P.pallidum:659

A8IAC7              	100.00%		D3BFQ1              	100.00%
Bootstrap support for A8IAC7 as seed ortholog is 100%.
Bootstrap support for D3BFQ1 as seed ortholog is 100%.

Group of orthologs #95. Best score 656 bits
Score difference with first non-orthologous sequence - C.reinhardtii:573 P.pallidum:450

A8J524              	100.00%		D3B5E4              	100.00%
Bootstrap support for A8J524 as seed ortholog is 100%.
Bootstrap support for D3B5E4 as seed ortholog is 100%.

Group of orthologs #96. Best score 655 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.pallidum:655

A8IQU3              	100.00%		D3B434              	100.00%
Bootstrap support for A8IQU3 as seed ortholog is 95%.
Bootstrap support for D3B434 as seed ortholog is 100%.

Group of orthologs #97. Best score 654 bits
Score difference with first non-orthologous sequence - C.reinhardtii:586 P.pallidum:387

A8JE04              	100.00%		D3B3N8              	100.00%
Bootstrap support for A8JE04 as seed ortholog is 100%.
Bootstrap support for D3B3N8 as seed ortholog is 100%.

Group of orthologs #98. Best score 653 bits
Score difference with first non-orthologous sequence - C.reinhardtii:653 P.pallidum:653

A8JDP3              	100.00%		D3BBT9              	100.00%
Bootstrap support for A8JDP3 as seed ortholog is 100%.
Bootstrap support for D3BBT9 as seed ortholog is 100%.

Group of orthologs #99. Best score 652 bits
Score difference with first non-orthologous sequence - C.reinhardtii:652 P.pallidum:652

A8IB70              	100.00%		D3B8I4              	100.00%
Bootstrap support for A8IB70 as seed ortholog is 100%.
Bootstrap support for D3B8I4 as seed ortholog is 100%.

Group of orthologs #100. Best score 651 bits
Score difference with first non-orthologous sequence - C.reinhardtii:651 P.pallidum:651

A8JG58              	100.00%		D3B7L4              	100.00%
Bootstrap support for A8JG58 as seed ortholog is 100%.
Bootstrap support for D3B7L4 as seed ortholog is 100%.

Group of orthologs #101. Best score 650 bits
Score difference with first non-orthologous sequence - C.reinhardtii:650 P.pallidum:457

A8II42              	100.00%		D3B0K9              	100.00%
Bootstrap support for A8II42 as seed ortholog is 100%.
Bootstrap support for D3B0K9 as seed ortholog is 100%.

Group of orthologs #102. Best score 649 bits
Score difference with first non-orthologous sequence - C.reinhardtii:649 P.pallidum:649

A8J1K0              	100.00%		D3BUD3              	100.00%
A8J9X3              	44.84%		D3BUC4              	41.57%
A8IST3              	30.02%		
Bootstrap support for A8J1K0 as seed ortholog is 100%.
Bootstrap support for D3BUD3 as seed ortholog is 100%.

Group of orthologs #103. Best score 649 bits
Score difference with first non-orthologous sequence - C.reinhardtii:649 P.pallidum:649

A8II71              	100.00%		D3BB83              	100.00%
Bootstrap support for A8II71 as seed ortholog is 100%.
Bootstrap support for D3BB83 as seed ortholog is 100%.

Group of orthologs #104. Best score 647 bits
Score difference with first non-orthologous sequence - C.reinhardtii:647 P.pallidum:285

A8J3N3              	100.00%		D3BBD1              	100.00%
Bootstrap support for A8J3N3 as seed ortholog is 100%.
Bootstrap support for D3BBD1 as seed ortholog is 100%.

Group of orthologs #105. Best score 638 bits
Score difference with first non-orthologous sequence - C.reinhardtii:582 P.pallidum:521

A8J014              	100.00%		D3BK16              	100.00%
Bootstrap support for A8J014 as seed ortholog is 100%.
Bootstrap support for D3BK16 as seed ortholog is 100%.

Group of orthologs #106. Best score 636 bits
Score difference with first non-orthologous sequence - C.reinhardtii:636 P.pallidum:636

A8JG07              	100.00%		D3B3X6              	100.00%
Bootstrap support for A8JG07 as seed ortholog is 100%.
Bootstrap support for D3B3X6 as seed ortholog is 100%.

Group of orthologs #107. Best score 628 bits
Score difference with first non-orthologous sequence - C.reinhardtii:214 P.pallidum:69

A8IHD9              	100.00%		D3AVX4              	100.00%
Bootstrap support for A8IHD9 as seed ortholog is 99%.
Bootstrap support for D3AVX4 as seed ortholog is 91%.

Group of orthologs #108. Best score 627 bits
Score difference with first non-orthologous sequence - C.reinhardtii:182 P.pallidum:99

A8JGT9              	100.00%		D3B2J1              	100.00%
Bootstrap support for A8JGT9 as seed ortholog is 99%.
Bootstrap support for D3B2J1 as seed ortholog is 95%.

Group of orthologs #109. Best score 627 bits
Score difference with first non-orthologous sequence - C.reinhardtii:627 P.pallidum:627

A8JEI0              	100.00%		D3B4Z9              	100.00%
Bootstrap support for A8JEI0 as seed ortholog is 100%.
Bootstrap support for D3B4Z9 as seed ortholog is 100%.

Group of orthologs #110. Best score 626 bits
Score difference with first non-orthologous sequence - C.reinhardtii:626 P.pallidum:626

A8HP93              	100.00%		D3BC24              	100.00%
Bootstrap support for A8HP93 as seed ortholog is 100%.
Bootstrap support for D3BC24 as seed ortholog is 100%.

Group of orthologs #111. Best score 624 bits
Score difference with first non-orthologous sequence - C.reinhardtii:343 P.pallidum:131

A8J7C8              	100.00%		D3BRU6              	100.00%
Bootstrap support for A8J7C8 as seed ortholog is 100%.
Bootstrap support for D3BRU6 as seed ortholog is 99%.

Group of orthologs #112. Best score 623 bits
Score difference with first non-orthologous sequence - C.reinhardtii:623 P.pallidum:448

A8IIS1              	100.00%		D3BE83              	100.00%
Bootstrap support for A8IIS1 as seed ortholog is 100%.
Bootstrap support for D3BE83 as seed ortholog is 100%.

Group of orthologs #113. Best score 621 bits
Score difference with first non-orthologous sequence - C.reinhardtii:621 P.pallidum:621

A8I175              	100.00%		D3BDZ2              	100.00%
Bootstrap support for A8I175 as seed ortholog is 100%.
Bootstrap support for D3BDZ2 as seed ortholog is 100%.

Group of orthologs #114. Best score 620 bits
Score difference with first non-orthologous sequence - C.reinhardtii:620 P.pallidum:620

A8IGM5              	100.00%		D3B5K0              	100.00%
Bootstrap support for A8IGM5 as seed ortholog is 100%.
Bootstrap support for D3B5K0 as seed ortholog is 100%.

Group of orthologs #115. Best score 619 bits
Score difference with first non-orthologous sequence - C.reinhardtii:286 P.pallidum:619

A8HVM3              	100.00%		D3BMT5              	100.00%
Bootstrap support for A8HVM3 as seed ortholog is 100%.
Bootstrap support for D3BMT5 as seed ortholog is 100%.

Group of orthologs #116. Best score 618 bits
Score difference with first non-orthologous sequence - C.reinhardtii:25 P.pallidum:540

A8IU68              	100.00%		D3BPX3              	100.00%
                    	       		D3BC16              	10.49%
Bootstrap support for A8IU68 as seed ortholog is 65%.
Alternative seed ortholog is A8IVG7 (25 bits away from this cluster)
Bootstrap support for D3BPX3 as seed ortholog is 100%.

Group of orthologs #117. Best score 618 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 P.pallidum:618

A8HPT4              	100.00%		D3B4Y9              	100.00%
Bootstrap support for A8HPT4 as seed ortholog is 99%.
Bootstrap support for D3B4Y9 as seed ortholog is 100%.

Group of orthologs #118. Best score 618 bits
Score difference with first non-orthologous sequence - C.reinhardtii:618 P.pallidum:618

A8JHE3              	100.00%		D3AWW1              	100.00%
Bootstrap support for A8JHE3 as seed ortholog is 100%.
Bootstrap support for D3AWW1 as seed ortholog is 100%.

Group of orthologs #119. Best score 617 bits
Score difference with first non-orthologous sequence - C.reinhardtii:617 P.pallidum:617

A8JEV6              	100.00%		D3BN72              	100.00%
Bootstrap support for A8JEV6 as seed ortholog is 100%.
Bootstrap support for D3BN72 as seed ortholog is 100%.

Group of orthologs #120. Best score 613 bits
Score difference with first non-orthologous sequence - C.reinhardtii:427 P.pallidum:462

A8J3L9              	100.00%		D3BUA7              	100.00%
Bootstrap support for A8J3L9 as seed ortholog is 100%.
Bootstrap support for D3BUA7 as seed ortholog is 100%.

Group of orthologs #121. Best score 609 bits
Score difference with first non-orthologous sequence - C.reinhardtii:257 P.pallidum:387

A8IIL1              	100.00%		D3BRA7              	100.00%
Bootstrap support for A8IIL1 as seed ortholog is 100%.
Bootstrap support for D3BRA7 as seed ortholog is 100%.

Group of orthologs #122. Best score 607 bits
Score difference with first non-orthologous sequence - C.reinhardtii:607 P.pallidum:607

A8I8V5              	100.00%		D3BAM8              	100.00%
Bootstrap support for A8I8V5 as seed ortholog is 100%.
Bootstrap support for D3BAM8 as seed ortholog is 100%.

Group of orthologs #123. Best score 607 bits
Score difference with first non-orthologous sequence - C.reinhardtii:607 P.pallidum:607

Q8VZZ5              	100.00%		D3AYV1              	100.00%
Bootstrap support for Q8VZZ5 as seed ortholog is 100%.
Bootstrap support for D3AYV1 as seed ortholog is 100%.

Group of orthologs #124. Best score 607 bits
Score difference with first non-orthologous sequence - C.reinhardtii:607 P.pallidum:30

A8J9S7              	100.00%		D3BEC9              	100.00%
Bootstrap support for A8J9S7 as seed ortholog is 100%.
Bootstrap support for D3BEC9 as seed ortholog is 81%.

Group of orthologs #125. Best score 606 bits
Score difference with first non-orthologous sequence - C.reinhardtii:606 P.pallidum:606

A8J8Z1              	100.00%		D3BII3              	100.00%
Bootstrap support for A8J8Z1 as seed ortholog is 100%.
Bootstrap support for D3BII3 as seed ortholog is 100%.

Group of orthologs #126. Best score 602 bits
Score difference with first non-orthologous sequence - C.reinhardtii:602 P.pallidum:602

Q6X898              	100.00%		D3BHG0              	100.00%
Bootstrap support for Q6X898 as seed ortholog is 100%.
Bootstrap support for D3BHG0 as seed ortholog is 100%.

Group of orthologs #127. Best score 601 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 P.pallidum:174

A8J829              	100.00%		D3BB49              	100.00%
Bootstrap support for A8J829 as seed ortholog is 32%.
Alternative seed ortholog is A8JBB5 (20 bits away from this cluster)
Bootstrap support for D3BB49 as seed ortholog is 99%.

Group of orthologs #128. Best score 600 bits
Score difference with first non-orthologous sequence - C.reinhardtii:254 P.pallidum:422

A8JH25              	100.00%		D3BUQ9              	100.00%
Bootstrap support for A8JH25 as seed ortholog is 99%.
Bootstrap support for D3BUQ9 as seed ortholog is 100%.

Group of orthologs #129. Best score 597 bits
Score difference with first non-orthologous sequence - C.reinhardtii:429 P.pallidum:284

A8IIP7              	100.00%		D3BPU8              	100.00%
Bootstrap support for A8IIP7 as seed ortholog is 100%.
Bootstrap support for D3BPU8 as seed ortholog is 100%.

Group of orthologs #130. Best score 594 bits
Score difference with first non-orthologous sequence - C.reinhardtii:594 P.pallidum:594

A8IAY6              	100.00%		D3BTZ2              	100.00%
Bootstrap support for A8IAY6 as seed ortholog is 100%.
Bootstrap support for D3BTZ2 as seed ortholog is 100%.

Group of orthologs #131. Best score 593 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 P.pallidum:501

A8IMK1              	100.00%		D3B3I9              	100.00%
Bootstrap support for A8IMK1 as seed ortholog is 99%.
Bootstrap support for D3B3I9 as seed ortholog is 100%.

Group of orthologs #132. Best score 588 bits
Score difference with first non-orthologous sequence - C.reinhardtii:588 P.pallidum:520

A8HXM5              	100.00%		D3B6H8              	100.00%
Bootstrap support for A8HXM5 as seed ortholog is 100%.
Bootstrap support for D3B6H8 as seed ortholog is 100%.

Group of orthologs #133. Best score 587 bits
Score difference with first non-orthologous sequence - C.reinhardtii:446 P.pallidum:171

A8J9Q1              	100.00%		D3AZ87              	100.00%
Bootstrap support for A8J9Q1 as seed ortholog is 100%.
Bootstrap support for D3AZ87 as seed ortholog is 99%.

Group of orthologs #134. Best score 587 bits
Score difference with first non-orthologous sequence - C.reinhardtii:184 P.pallidum:129

A8J979              	100.00%		D3BHW3              	100.00%
Bootstrap support for A8J979 as seed ortholog is 100%.
Bootstrap support for D3BHW3 as seed ortholog is 99%.

Group of orthologs #135. Best score 586 bits
Score difference with first non-orthologous sequence - C.reinhardtii:514 P.pallidum:500

A8J709              	100.00%		D3B1H9              	100.00%
Bootstrap support for A8J709 as seed ortholog is 100%.
Bootstrap support for D3B1H9 as seed ortholog is 100%.

Group of orthologs #136. Best score 581 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 P.pallidum:222

A8J040              	100.00%		D3BKM7              	100.00%
Bootstrap support for A8J040 as seed ortholog is 99%.
Bootstrap support for D3BKM7 as seed ortholog is 99%.

Group of orthologs #137. Best score 580 bits
Score difference with first non-orthologous sequence - C.reinhardtii:580 P.pallidum:580

A8JH98              	100.00%		D3BP87              	100.00%
                    	       		D3BH75              	27.40%
Bootstrap support for A8JH98 as seed ortholog is 100%.
Bootstrap support for D3BP87 as seed ortholog is 100%.

Group of orthologs #138. Best score 577 bits
Score difference with first non-orthologous sequence - C.reinhardtii:577 P.pallidum:577

A8HP46              	100.00%		D3B1F9              	100.00%
Bootstrap support for A8HP46 as seed ortholog is 100%.
Bootstrap support for D3B1F9 as seed ortholog is 100%.

Group of orthologs #139. Best score 576 bits
Score difference with first non-orthologous sequence - C.reinhardtii:576 P.pallidum:576

A8I793              	100.00%		D3B127              	100.00%
Bootstrap support for A8I793 as seed ortholog is 100%.
Bootstrap support for D3B127 as seed ortholog is 100%.

Group of orthologs #140. Best score 573 bits
Score difference with first non-orthologous sequence - C.reinhardtii:31 P.pallidum:573

A8JFK4              	100.00%		D3B2S5              	100.00%
                    	       		D3BUR5              	25.49%
Bootstrap support for A8JFK4 as seed ortholog is 79%.
Bootstrap support for D3B2S5 as seed ortholog is 100%.

Group of orthologs #141. Best score 566 bits
Score difference with first non-orthologous sequence - C.reinhardtii:390 P.pallidum:252

A8IR41              	100.00%		D3BHQ7              	100.00%
Bootstrap support for A8IR41 as seed ortholog is 100%.
Bootstrap support for D3BHQ7 as seed ortholog is 100%.

Group of orthologs #142. Best score 565 bits
Score difference with first non-orthologous sequence - C.reinhardtii:565 P.pallidum:422

A8IF08              	100.00%		D3B2K0              	100.00%
Bootstrap support for A8IF08 as seed ortholog is 100%.
Bootstrap support for D3B2K0 as seed ortholog is 100%.

Group of orthologs #143. Best score 564 bits
Score difference with first non-orthologous sequence - C.reinhardtii:564 P.pallidum:564

A8IED9              	100.00%		D3AWX0              	100.00%
Bootstrap support for A8IED9 as seed ortholog is 100%.
Bootstrap support for D3AWX0 as seed ortholog is 100%.

Group of orthologs #144. Best score 564 bits
Score difference with first non-orthologous sequence - C.reinhardtii:463 P.pallidum:476

A8HYC0              	100.00%		D3BQX1              	100.00%
Bootstrap support for A8HYC0 as seed ortholog is 100%.
Bootstrap support for D3BQX1 as seed ortholog is 100%.

Group of orthologs #145. Best score 564 bits
Score difference with first non-orthologous sequence - C.reinhardtii:294 P.pallidum:417

A8JCJ9              	100.00%		D3BU41              	100.00%
Bootstrap support for A8JCJ9 as seed ortholog is 100%.
Bootstrap support for D3BU41 as seed ortholog is 100%.

Group of orthologs #146. Best score 563 bits
Score difference with first non-orthologous sequence - C.reinhardtii:563 P.pallidum:318

A8JF35              	100.00%		D3B9H8              	100.00%
Bootstrap support for A8JF35 as seed ortholog is 100%.
Bootstrap support for D3B9H8 as seed ortholog is 100%.

Group of orthologs #147. Best score 562 bits
Score difference with first non-orthologous sequence - C.reinhardtii:562 P.pallidum:562

A8ISE2              	100.00%		D3AYJ5              	100.00%
Bootstrap support for A8ISE2 as seed ortholog is 100%.
Bootstrap support for D3AYJ5 as seed ortholog is 100%.

Group of orthologs #148. Best score 561 bits
Score difference with first non-orthologous sequence - C.reinhardtii:262 P.pallidum:291

A8JHY5              	100.00%		D3B6I7              	100.00%
Bootstrap support for A8JHY5 as seed ortholog is 99%.
Bootstrap support for D3B6I7 as seed ortholog is 100%.

Group of orthologs #149. Best score 560 bits
Score difference with first non-orthologous sequence - C.reinhardtii:560 P.pallidum:256

A8IWA5              	100.00%		D3BEH4              	100.00%
Bootstrap support for A8IWA5 as seed ortholog is 100%.
Bootstrap support for D3BEH4 as seed ortholog is 100%.

Group of orthologs #150. Best score 559 bits
Score difference with first non-orthologous sequence - C.reinhardtii:472 P.pallidum:559

A8J4L1              	100.00%		D3AZB7              	100.00%
Bootstrap support for A8J4L1 as seed ortholog is 100%.
Bootstrap support for D3AZB7 as seed ortholog is 100%.

Group of orthologs #151. Best score 559 bits
Score difference with first non-orthologous sequence - C.reinhardtii:261 P.pallidum:559

A8IDL8              	100.00%		D3BV25              	100.00%
Bootstrap support for A8IDL8 as seed ortholog is 100%.
Bootstrap support for D3BV25 as seed ortholog is 100%.

Group of orthologs #152. Best score 557 bits
Score difference with first non-orthologous sequence - C.reinhardtii:557 P.pallidum:557

A8HYU5              	100.00%		D3B427              	100.00%
Bootstrap support for A8HYU5 as seed ortholog is 100%.
Bootstrap support for D3B427 as seed ortholog is 100%.

Group of orthologs #153. Best score 557 bits
Score difference with first non-orthologous sequence - C.reinhardtii:259 P.pallidum:557

A8IPH5              	100.00%		D3B0M9              	100.00%
Bootstrap support for A8IPH5 as seed ortholog is 100%.
Bootstrap support for D3B0M9 as seed ortholog is 100%.

Group of orthologs #154. Best score 556 bits
Score difference with first non-orthologous sequence - C.reinhardtii:400 P.pallidum:556

A8J1S7              	100.00%		D3BT16              	100.00%
Bootstrap support for A8J1S7 as seed ortholog is 100%.
Bootstrap support for D3BT16 as seed ortholog is 100%.

Group of orthologs #155. Best score 551 bits
Score difference with first non-orthologous sequence - C.reinhardtii:239 P.pallidum:551

A8HPZ4              	100.00%		D3BB39              	100.00%
Bootstrap support for A8HPZ4 as seed ortholog is 100%.
Bootstrap support for D3BB39 as seed ortholog is 100%.

Group of orthologs #156. Best score 550 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.pallidum:419

A8JAY4              	100.00%		D3BBY5              	100.00%
Bootstrap support for A8JAY4 as seed ortholog is 91%.
Bootstrap support for D3BBY5 as seed ortholog is 100%.

Group of orthologs #157. Best score 549 bits
Score difference with first non-orthologous sequence - C.reinhardtii:455 P.pallidum:549

A8IT38              	100.00%		D3BFY1              	100.00%
A8IT35              	58.64%		D3B9U1              	53.01%
                    	       		D3BCU4              	52.46%
                    	       		D3BLW2              	50.25%
                    	       		D3BNU9              	46.78%
Bootstrap support for A8IT38 as seed ortholog is 100%.
Bootstrap support for D3BFY1 as seed ortholog is 100%.

Group of orthologs #158. Best score 545 bits
Score difference with first non-orthologous sequence - C.reinhardtii:371 P.pallidum:471

A8J8F1              	100.00%		D3B0Z9              	100.00%
A8J6J3              	30.47%		D3B1H6              	21.61%
A8IZY4              	27.45%		D3AY21              	17.05%
A8IYV1              	5.24%		D3BN11              	16.76%
                    	       		D3B4E8              	11.09%
Bootstrap support for A8J8F1 as seed ortholog is 100%.
Bootstrap support for D3B0Z9 as seed ortholog is 100%.

Group of orthologs #159. Best score 544 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 P.pallidum:154

A8HQA8              	100.00%		D3BB29              	100.00%
Bootstrap support for A8HQA8 as seed ortholog is 100%.
Bootstrap support for D3BB29 as seed ortholog is 99%.

Group of orthologs #160. Best score 542 bits
Score difference with first non-orthologous sequence - C.reinhardtii:542 P.pallidum:542

A8IF83              	100.00%		D3BL57              	100.00%
                    	       		D3BL58              	43.68%
Bootstrap support for A8IF83 as seed ortholog is 100%.
Bootstrap support for D3BL57 as seed ortholog is 100%.

Group of orthologs #161. Best score 540 bits
Score difference with first non-orthologous sequence - C.reinhardtii:540 P.pallidum:540

A8JH39              	100.00%		D3B474              	100.00%
Bootstrap support for A8JH39 as seed ortholog is 100%.
Bootstrap support for D3B474 as seed ortholog is 100%.

Group of orthologs #162. Best score 539 bits
Score difference with first non-orthologous sequence - C.reinhardtii:539 P.pallidum:539

A8J940              	100.00%		D3B3Y9              	100.00%
Bootstrap support for A8J940 as seed ortholog is 100%.
Bootstrap support for D3B3Y9 as seed ortholog is 100%.

Group of orthologs #163. Best score 539 bits
Score difference with first non-orthologous sequence - C.reinhardtii:539 P.pallidum:539

A8J9E6              	100.00%		D3BB47              	100.00%
Bootstrap support for A8J9E6 as seed ortholog is 100%.
Bootstrap support for D3BB47 as seed ortholog is 100%.

Group of orthologs #164. Best score 538 bits
Score difference with first non-orthologous sequence - C.reinhardtii:347 P.pallidum:264

A8I675              	100.00%		D3B6E1              	100.00%
Bootstrap support for A8I675 as seed ortholog is 100%.
Bootstrap support for D3B6E1 as seed ortholog is 100%.

Group of orthologs #165. Best score 536 bits
Score difference with first non-orthologous sequence - C.reinhardtii:536 P.pallidum:536

A8IDJ7              	100.00%		D3BJ98              	100.00%
Bootstrap support for A8IDJ7 as seed ortholog is 100%.
Bootstrap support for D3BJ98 as seed ortholog is 100%.

Group of orthologs #166. Best score 534 bits
Score difference with first non-orthologous sequence - C.reinhardtii:534 P.pallidum:375

A8J146              	100.00%		D3AVV8              	100.00%
Bootstrap support for A8J146 as seed ortholog is 100%.
Bootstrap support for D3AVV8 as seed ortholog is 100%.

Group of orthologs #167. Best score 532 bits
Score difference with first non-orthologous sequence - C.reinhardtii:532 P.pallidum:532

A8HPT8              	100.00%		D3BB77              	100.00%
Bootstrap support for A8HPT8 as seed ortholog is 100%.
Bootstrap support for D3BB77 as seed ortholog is 100%.

Group of orthologs #168. Best score 532 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 P.pallidum:312

A8IJV1              	100.00%		D3BK58              	100.00%
Bootstrap support for A8IJV1 as seed ortholog is 100%.
Bootstrap support for D3BK58 as seed ortholog is 100%.

Group of orthologs #169. Best score 532 bits
Score difference with first non-orthologous sequence - C.reinhardtii:285 P.pallidum:340

A8JB11              	100.00%		D3BM62              	100.00%
Bootstrap support for A8JB11 as seed ortholog is 100%.
Bootstrap support for D3BM62 as seed ortholog is 100%.

Group of orthologs #170. Best score 531 bits
Score difference with first non-orthologous sequence - C.reinhardtii:531 P.pallidum:531

A8J244              	100.00%		D3BEZ2              	100.00%
Bootstrap support for A8J244 as seed ortholog is 100%.
Bootstrap support for D3BEZ2 as seed ortholog is 100%.

Group of orthologs #171. Best score 530 bits
Score difference with first non-orthologous sequence - C.reinhardtii:530 P.pallidum:530

A8HYH7              	100.00%		D3BE82              	100.00%
Bootstrap support for A8HYH7 as seed ortholog is 100%.
Bootstrap support for D3BE82 as seed ortholog is 100%.

Group of orthologs #172. Best score 529 bits
Score difference with first non-orthologous sequence - C.reinhardtii:400 P.pallidum:31

A8IA39              	100.00%		D3BMN4              	100.00%
Bootstrap support for A8IA39 as seed ortholog is 100%.
Bootstrap support for D3BMN4 as seed ortholog is 73%.
Alternative seed ortholog is D3BNW4 (31 bits away from this cluster)

Group of orthologs #173. Best score 529 bits
Score difference with first non-orthologous sequence - C.reinhardtii:235 P.pallidum:529

A8IBN3              	100.00%		D3BRI9              	100.00%
Bootstrap support for A8IBN3 as seed ortholog is 100%.
Bootstrap support for D3BRI9 as seed ortholog is 100%.

Group of orthologs #174. Best score 528 bits
Score difference with first non-orthologous sequence - C.reinhardtii:316 P.pallidum:9

A8J189              	100.00%		D3B5W1              	100.00%
Bootstrap support for A8J189 as seed ortholog is 99%.
Bootstrap support for D3B5W1 as seed ortholog is 52%.
Alternative seed ortholog is D3BIH4 (9 bits away from this cluster)

Group of orthologs #175. Best score 527 bits
Score difference with first non-orthologous sequence - C.reinhardtii:527 P.pallidum:527

A8ID84              	100.00%		D3BK20              	100.00%
Bootstrap support for A8ID84 as seed ortholog is 100%.
Bootstrap support for D3BK20 as seed ortholog is 100%.

Group of orthologs #176. Best score 526 bits
Score difference with first non-orthologous sequence - C.reinhardtii:526 P.pallidum:328

A8HXA2              	100.00%		D3B3K7              	100.00%
Bootstrap support for A8HXA2 as seed ortholog is 100%.
Bootstrap support for D3B3K7 as seed ortholog is 100%.

Group of orthologs #177. Best score 526 bits
Score difference with first non-orthologous sequence - C.reinhardtii:526 P.pallidum:526

A8ID74              	100.00%		D3BN75              	100.00%
Bootstrap support for A8ID74 as seed ortholog is 100%.
Bootstrap support for D3BN75 as seed ortholog is 100%.

Group of orthologs #178. Best score 522 bits
Score difference with first non-orthologous sequence - C.reinhardtii:522 P.pallidum:522

A8ILF4              	100.00%		D3BUF5              	100.00%
Bootstrap support for A8ILF4 as seed ortholog is 100%.
Bootstrap support for D3BUF5 as seed ortholog is 100%.

Group of orthologs #179. Best score 520 bits
Score difference with first non-orthologous sequence - C.reinhardtii:520 P.pallidum:520

A8JAP7              	100.00%		D3BQJ8              	100.00%
Bootstrap support for A8JAP7 as seed ortholog is 100%.
Bootstrap support for D3BQJ8 as seed ortholog is 100%.

Group of orthologs #180. Best score 519 bits
Score difference with first non-orthologous sequence - C.reinhardtii:379 P.pallidum:375

A8I9J2              	100.00%		D3BVG6              	100.00%
                    	       		D3AY71              	15.13%
Bootstrap support for A8I9J2 as seed ortholog is 100%.
Bootstrap support for D3BVG6 as seed ortholog is 100%.

Group of orthologs #181. Best score 519 bits
Score difference with first non-orthologous sequence - C.reinhardtii:519 P.pallidum:519

A8IDM1              	100.00%		D3BQM7              	100.00%
Bootstrap support for A8IDM1 as seed ortholog is 100%.
Bootstrap support for D3BQM7 as seed ortholog is 100%.

Group of orthologs #182. Best score 517 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.pallidum:351

A8JBC9              	100.00%		D3BQ35              	100.00%
A8HQ21              	45.14%		
Bootstrap support for A8JBC9 as seed ortholog is 99%.
Bootstrap support for D3BQ35 as seed ortholog is 100%.

Group of orthologs #183. Best score 517 bits
Score difference with first non-orthologous sequence - C.reinhardtii:517 P.pallidum:405

A8JES3              	100.00%		D3AZP8              	100.00%
Bootstrap support for A8JES3 as seed ortholog is 100%.
Bootstrap support for D3AZP8 as seed ortholog is 100%.

Group of orthologs #184. Best score 515 bits
Score difference with first non-orthologous sequence - C.reinhardtii:515 P.pallidum:515

A8I093              	100.00%		D3AY94              	100.00%
Bootstrap support for A8I093 as seed ortholog is 100%.
Bootstrap support for D3AY94 as seed ortholog is 100%.

Group of orthologs #185. Best score 515 bits
Score difference with first non-orthologous sequence - C.reinhardtii:300 P.pallidum:256

Q9XGU3              	100.00%		D3BBY9              	100.00%
Bootstrap support for Q9XGU3 as seed ortholog is 100%.
Bootstrap support for D3BBY9 as seed ortholog is 100%.

Group of orthologs #186. Best score 514 bits
Score difference with first non-orthologous sequence - C.reinhardtii:409 P.pallidum:514

A8HPY4              	100.00%		D3BD87              	100.00%
Bootstrap support for A8HPY4 as seed ortholog is 100%.
Bootstrap support for D3BD87 as seed ortholog is 100%.

Group of orthologs #187. Best score 513 bits
Score difference with first non-orthologous sequence - C.reinhardtii:513 P.pallidum:276

A8IPE0              	100.00%		D3BJP0              	100.00%
Bootstrap support for A8IPE0 as seed ortholog is 100%.
Bootstrap support for D3BJP0 as seed ortholog is 100%.

Group of orthologs #188. Best score 512 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 P.pallidum:512

A8I6G3              	100.00%		D3BRF2              	100.00%
Bootstrap support for A8I6G3 as seed ortholog is 99%.
Bootstrap support for D3BRF2 as seed ortholog is 100%.

Group of orthologs #189. Best score 510 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.pallidum:304

A8IP17              	100.00%		D3BMB3              	100.00%
Bootstrap support for A8IP17 as seed ortholog is 96%.
Bootstrap support for D3BMB3 as seed ortholog is 100%.

Group of orthologs #190. Best score 510 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.pallidum:310

A8J1V5              	100.00%		D3BR06              	100.00%
Bootstrap support for A8J1V5 as seed ortholog is 100%.
Bootstrap support for D3BR06 as seed ortholog is 100%.

Group of orthologs #191. Best score 509 bits
Score difference with first non-orthologous sequence - C.reinhardtii:509 P.pallidum:306

A8J2S0              	100.00%		D3AVV7              	100.00%
                    	       		D3BI35              	24.05%
Bootstrap support for A8J2S0 as seed ortholog is 100%.
Bootstrap support for D3AVV7 as seed ortholog is 100%.

Group of orthologs #192. Best score 507 bits
Score difference with first non-orthologous sequence - C.reinhardtii:319 P.pallidum:339

A8IRS1              	100.00%		D3BET6              	100.00%
Bootstrap support for A8IRS1 as seed ortholog is 100%.
Bootstrap support for D3BET6 as seed ortholog is 100%.

Group of orthologs #193. Best score 506 bits
Score difference with first non-orthologous sequence - C.reinhardtii:269 P.pallidum:294

A8JIJ1              	100.00%		D3BNB9              	100.00%
Bootstrap support for A8JIJ1 as seed ortholog is 100%.
Bootstrap support for D3BNB9 as seed ortholog is 100%.

Group of orthologs #194. Best score 505 bits
Score difference with first non-orthologous sequence - C.reinhardtii:505 P.pallidum:505

A8IW34              	100.00%		D3BTQ4              	100.00%
Bootstrap support for A8IW34 as seed ortholog is 100%.
Bootstrap support for D3BTQ4 as seed ortholog is 100%.

Group of orthologs #195. Best score 502 bits
Score difference with first non-orthologous sequence - C.reinhardtii:217 P.pallidum:211

A8I985              	100.00%		D3BBC2              	100.00%
Bootstrap support for A8I985 as seed ortholog is 100%.
Bootstrap support for D3BBC2 as seed ortholog is 99%.

Group of orthologs #196. Best score 500 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.pallidum:131

A8JBP0              	100.00%		D3BKP8              	100.00%
Bootstrap support for A8JBP0 as seed ortholog is 99%.
Bootstrap support for D3BKP8 as seed ortholog is 100%.

Group of orthologs #197. Best score 498 bits
Score difference with first non-orthologous sequence - C.reinhardtii:498 P.pallidum:498

A8IXE0              	100.00%		D3BNY4              	100.00%
Bootstrap support for A8IXE0 as seed ortholog is 100%.
Bootstrap support for D3BNY4 as seed ortholog is 100%.

Group of orthologs #198. Best score 497 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.pallidum:497

A8J3G7              	100.00%		D3AZM1              	100.00%
Bootstrap support for A8J3G7 as seed ortholog is 97%.
Bootstrap support for D3AZM1 as seed ortholog is 100%.

Group of orthologs #199. Best score 496 bits
Score difference with first non-orthologous sequence - C.reinhardtii:496 P.pallidum:120

A8J7G2              	100.00%		D3BUM8              	100.00%
Bootstrap support for A8J7G2 as seed ortholog is 100%.
Bootstrap support for D3BUM8 as seed ortholog is 98%.

Group of orthologs #200. Best score 495 bits
Score difference with first non-orthologous sequence - C.reinhardtii:374 P.pallidum:139

A8JAP1              	100.00%		D3B2S6              	100.00%
Bootstrap support for A8JAP1 as seed ortholog is 100%.
Bootstrap support for D3B2S6 as seed ortholog is 98%.

Group of orthologs #201. Best score 495 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 P.pallidum:304

A8IJ19              	100.00%		D3BRC2              	100.00%
Bootstrap support for A8IJ19 as seed ortholog is 99%.
Bootstrap support for D3BRC2 as seed ortholog is 100%.

Group of orthologs #202. Best score 493 bits
Score difference with first non-orthologous sequence - C.reinhardtii:493 P.pallidum:493

A8HUI3              	100.00%		D3BR30              	100.00%
Bootstrap support for A8HUI3 as seed ortholog is 100%.
Bootstrap support for D3BR30 as seed ortholog is 100%.

Group of orthologs #203. Best score 490 bits
Score difference with first non-orthologous sequence - C.reinhardtii:490 P.pallidum:490

A8J5U1              	100.00%		D3B072              	100.00%
Bootstrap support for A8J5U1 as seed ortholog is 100%.
Bootstrap support for D3B072 as seed ortholog is 100%.

Group of orthologs #204. Best score 490 bits
Score difference with first non-orthologous sequence - C.reinhardtii:441 P.pallidum:490

A8IAN1              	100.00%		D3BUD8              	100.00%
Bootstrap support for A8IAN1 as seed ortholog is 100%.
Bootstrap support for D3BUD8 as seed ortholog is 100%.

Group of orthologs #205. Best score 489 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.pallidum:397

A8HZZ4              	100.00%		D3BE54              	100.00%
                    	       		D3BBB8              	12.50%
Bootstrap support for A8HZZ4 as seed ortholog is 99%.
Bootstrap support for D3BE54 as seed ortholog is 100%.

Group of orthologs #206. Best score 488 bits
Score difference with first non-orthologous sequence - C.reinhardtii:488 P.pallidum:308

A8JGX1              	100.00%		D3AXY2              	100.00%
Bootstrap support for A8JGX1 as seed ortholog is 100%.
Bootstrap support for D3AXY2 as seed ortholog is 100%.

Group of orthologs #207. Best score 488 bits
Score difference with first non-orthologous sequence - C.reinhardtii:410 P.pallidum:189

A8J1X8              	100.00%		D3BEH3              	100.00%
Bootstrap support for A8J1X8 as seed ortholog is 100%.
Bootstrap support for D3BEH3 as seed ortholog is 99%.

Group of orthologs #208. Best score 487 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 P.pallidum:140

A8IMP0              	100.00%		D3B2M8              	100.00%
Bootstrap support for A8IMP0 as seed ortholog is 100%.
Bootstrap support for D3B2M8 as seed ortholog is 100%.

Group of orthologs #209. Best score 486 bits
Score difference with first non-orthologous sequence - C.reinhardtii:486 P.pallidum:486

A8IFS3              	100.00%		D3B8G9              	100.00%
Bootstrap support for A8IFS3 as seed ortholog is 100%.
Bootstrap support for D3B8G9 as seed ortholog is 100%.

Group of orthologs #210. Best score 486 bits
Score difference with first non-orthologous sequence - C.reinhardtii:486 P.pallidum:486

A8ITK3              	100.00%		D3BNT7              	100.00%
Bootstrap support for A8ITK3 as seed ortholog is 100%.
Bootstrap support for D3BNT7 as seed ortholog is 100%.

Group of orthologs #211. Best score 484 bits
Score difference with first non-orthologous sequence - C.reinhardtii:306 P.pallidum:484

A8J3P5              	100.00%		D3AVW9              	100.00%
Bootstrap support for A8J3P5 as seed ortholog is 99%.
Bootstrap support for D3AVW9 as seed ortholog is 100%.

Group of orthologs #212. Best score 484 bits
Score difference with first non-orthologous sequence - C.reinhardtii:484 P.pallidum:484

A8J5K4              	100.00%		D3BCL2              	100.00%
Bootstrap support for A8J5K4 as seed ortholog is 100%.
Bootstrap support for D3BCL2 as seed ortholog is 100%.

Group of orthologs #213. Best score 483 bits
Score difference with first non-orthologous sequence - C.reinhardtii:483 P.pallidum:483

A8IXY4              	100.00%		D3BPJ2              	100.00%
A8IYW8              	75.32%		
Bootstrap support for A8IXY4 as seed ortholog is 100%.
Bootstrap support for D3BPJ2 as seed ortholog is 100%.

Group of orthologs #214. Best score 483 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.pallidum:42

A8J6S4              	100.00%		D3B4X1              	100.00%
Bootstrap support for A8J6S4 as seed ortholog is 99%.
Bootstrap support for D3B4X1 as seed ortholog is 79%.

Group of orthologs #215. Best score 483 bits
Score difference with first non-orthologous sequence - C.reinhardtii:483 P.pallidum:483

A8JH37              	100.00%		D3B8U1              	100.00%
Bootstrap support for A8JH37 as seed ortholog is 100%.
Bootstrap support for D3B8U1 as seed ortholog is 100%.

Group of orthologs #216. Best score 482 bits
Score difference with first non-orthologous sequence - C.reinhardtii:482 P.pallidum:482

A8J8C7              	100.00%		D3B6E9              	100.00%
                    	       		D3BAW3              	28.14%
Bootstrap support for A8J8C7 as seed ortholog is 100%.
Bootstrap support for D3B6E9 as seed ortholog is 100%.

Group of orthologs #217. Best score 480 bits
Score difference with first non-orthologous sequence - C.reinhardtii:480 P.pallidum:480

A8J2Q6              	100.00%		D3BU59              	100.00%
Bootstrap support for A8J2Q6 as seed ortholog is 100%.
Bootstrap support for D3BU59 as seed ortholog is 100%.

Group of orthologs #218. Best score 476 bits
Score difference with first non-orthologous sequence - C.reinhardtii:476 P.pallidum:199

A8HME6              	100.00%		D3AVQ3              	100.00%
Bootstrap support for A8HME6 as seed ortholog is 100%.
Bootstrap support for D3AVQ3 as seed ortholog is 99%.

Group of orthologs #219. Best score 476 bits
Score difference with first non-orthologous sequence - C.reinhardtii:476 P.pallidum:476

A8IBR6              	100.00%		D3BAK5              	100.00%
Bootstrap support for A8IBR6 as seed ortholog is 100%.
Bootstrap support for D3BAK5 as seed ortholog is 100%.

Group of orthologs #220. Best score 476 bits
Score difference with first non-orthologous sequence - C.reinhardtii:476 P.pallidum:476

A8J5T5              	100.00%		D3BUT9              	100.00%
Bootstrap support for A8J5T5 as seed ortholog is 100%.
Bootstrap support for D3BUT9 as seed ortholog is 100%.

Group of orthologs #221. Best score 475 bits
Score difference with first non-orthologous sequence - C.reinhardtii:475 P.pallidum:475

A8IID0              	100.00%		D3AY91              	100.00%
Bootstrap support for A8IID0 as seed ortholog is 100%.
Bootstrap support for D3AY91 as seed ortholog is 100%.

Group of orthologs #222. Best score 474 bits
Score difference with first non-orthologous sequence - C.reinhardtii:474 P.pallidum:474

A8I459              	100.00%		D3AXB9              	100.00%
Bootstrap support for A8I459 as seed ortholog is 100%.
Bootstrap support for D3AXB9 as seed ortholog is 100%.

Group of orthologs #223. Best score 474 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 P.pallidum:474

A8J6K6              	100.00%		D3B0J2              	100.00%
Bootstrap support for A8J6K6 as seed ortholog is 99%.
Bootstrap support for D3B0J2 as seed ortholog is 100%.

Group of orthologs #224. Best score 473 bits
Score difference with first non-orthologous sequence - C.reinhardtii:473 P.pallidum:473

A8HPR5              	100.00%		D3AXR9              	100.00%
A8J484              	24.41%		
Bootstrap support for A8HPR5 as seed ortholog is 100%.
Bootstrap support for D3AXR9 as seed ortholog is 100%.

Group of orthologs #225. Best score 472 bits
Score difference with first non-orthologous sequence - C.reinhardtii:361 P.pallidum:472

A8JFR4              	100.00%		D3B161              	100.00%
Bootstrap support for A8JFR4 as seed ortholog is 100%.
Bootstrap support for D3B161 as seed ortholog is 100%.

Group of orthologs #226. Best score 471 bits
Score difference with first non-orthologous sequence - C.reinhardtii:393 P.pallidum:419

A8IY20              	100.00%		D3B4F3              	100.00%
Bootstrap support for A8IY20 as seed ortholog is 100%.
Bootstrap support for D3B4F3 as seed ortholog is 100%.

Group of orthologs #227. Best score 470 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.pallidum:27

A8J510              	100.00%		D3BGI5              	100.00%
                    	       		D3BK04              	18.70%
                    	       		D3BA71              	17.91%
                    	       		D3BKB9              	15.29%
                    	       		D3BPD4              	12.99%
Bootstrap support for A8J510 as seed ortholog is 97%.
Bootstrap support for D3BGI5 as seed ortholog is 66%.
Alternative seed ortholog is D3BG45 (27 bits away from this cluster)

Group of orthologs #228. Best score 470 bits
Score difference with first non-orthologous sequence - C.reinhardtii:358 P.pallidum:104

A8HNY7              	100.00%		D3AVG9              	100.00%
A8J6E9              	10.41%		
Bootstrap support for A8HNY7 as seed ortholog is 100%.
Bootstrap support for D3AVG9 as seed ortholog is 97%.

Group of orthologs #229. Best score 470 bits
Score difference with first non-orthologous sequence - C.reinhardtii:470 P.pallidum:171

A8IET6              	100.00%		D3BQM3              	100.00%
Bootstrap support for A8IET6 as seed ortholog is 100%.
Bootstrap support for D3BQM3 as seed ortholog is 99%.

Group of orthologs #230. Best score 467 bits
Score difference with first non-orthologous sequence - C.reinhardtii:467 P.pallidum:467

A8HQI5              	100.00%		D3B7Y2              	100.00%
Bootstrap support for A8HQI5 as seed ortholog is 100%.
Bootstrap support for D3B7Y2 as seed ortholog is 100%.

Group of orthologs #231. Best score 467 bits
Score difference with first non-orthologous sequence - C.reinhardtii:467 P.pallidum:467

A8J5F7              	100.00%		D3B6S4              	100.00%
Bootstrap support for A8J5F7 as seed ortholog is 100%.
Bootstrap support for D3B6S4 as seed ortholog is 100%.

Group of orthologs #232. Best score 465 bits
Score difference with first non-orthologous sequence - C.reinhardtii:465 P.pallidum:465

A8JG39              	100.00%		D3BRB4              	100.00%
Bootstrap support for A8JG39 as seed ortholog is 100%.
Bootstrap support for D3BRB4 as seed ortholog is 100%.

Group of orthologs #233. Best score 464 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.pallidum:330

A8JF80              	100.00%		D3B471              	100.00%
Bootstrap support for A8JF80 as seed ortholog is 98%.
Bootstrap support for D3B471 as seed ortholog is 100%.

Group of orthologs #234. Best score 463 bits
Score difference with first non-orthologous sequence - C.reinhardtii:463 P.pallidum:210

A8HMC0              	100.00%		D3BIF1              	100.00%
Bootstrap support for A8HMC0 as seed ortholog is 100%.
Bootstrap support for D3BIF1 as seed ortholog is 100%.

Group of orthologs #235. Best score 463 bits
Score difference with first non-orthologous sequence - C.reinhardtii:380 P.pallidum:396

A8IYG8              	100.00%		D3BDA3              	100.00%
Bootstrap support for A8IYG8 as seed ortholog is 100%.
Bootstrap support for D3BDA3 as seed ortholog is 100%.

Group of orthologs #236. Best score 463 bits
Score difference with first non-orthologous sequence - C.reinhardtii:463 P.pallidum:463

A8J168              	100.00%		D3BCX3              	100.00%
Bootstrap support for A8J168 as seed ortholog is 100%.
Bootstrap support for D3BCX3 as seed ortholog is 100%.

Group of orthologs #237. Best score 463 bits
Score difference with first non-orthologous sequence - C.reinhardtii:358 P.pallidum:205

A8IT31              	100.00%		D3BT28              	100.00%
Bootstrap support for A8IT31 as seed ortholog is 100%.
Bootstrap support for D3BT28 as seed ortholog is 99%.

Group of orthologs #238. Best score 462 bits
Score difference with first non-orthologous sequence - C.reinhardtii:462 P.pallidum:462

A8J9T2              	100.00%		D3BMP9              	100.00%
Bootstrap support for A8J9T2 as seed ortholog is 100%.
Bootstrap support for D3BMP9 as seed ortholog is 100%.

Group of orthologs #239. Best score 461 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.pallidum:461

A8IBD5              	100.00%		D3B2V3              	100.00%
Bootstrap support for A8IBD5 as seed ortholog is 96%.
Bootstrap support for D3B2V3 as seed ortholog is 100%.

Group of orthologs #240. Best score 460 bits
Score difference with first non-orthologous sequence - C.reinhardtii:346 P.pallidum:331

A8HXR2              	100.00%		D3B7P5              	100.00%
P17746              	8.78%		
Bootstrap support for A8HXR2 as seed ortholog is 100%.
Bootstrap support for D3B7P5 as seed ortholog is 100%.

Group of orthologs #241. Best score 459 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 P.pallidum:123

A8IBY2              	100.00%		D3BSG3              	100.00%
Bootstrap support for A8IBY2 as seed ortholog is 99%.
Bootstrap support for D3BSG3 as seed ortholog is 99%.

Group of orthologs #242. Best score 458 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 P.pallidum:198

A8IAJ1              	100.00%		D3AZ75              	100.00%
Bootstrap support for A8IAJ1 as seed ortholog is 99%.
Bootstrap support for D3AZ75 as seed ortholog is 100%.

Group of orthologs #243. Best score 458 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 P.pallidum:175

A8ISF0              	100.00%		D3B2M6              	100.00%
Bootstrap support for A8ISF0 as seed ortholog is 99%.
Bootstrap support for D3B2M6 as seed ortholog is 100%.

Group of orthologs #244. Best score 458 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 P.pallidum:84

A8JDN1              	100.00%		D3BLI7              	100.00%
Bootstrap support for A8JDN1 as seed ortholog is 100%.
Bootstrap support for D3BLI7 as seed ortholog is 99%.

Group of orthologs #245. Best score 457 bits
Score difference with first non-orthologous sequence - C.reinhardtii:457 P.pallidum:224

A8J6J6              	100.00%		D3BPS6              	100.00%
Bootstrap support for A8J6J6 as seed ortholog is 100%.
Bootstrap support for D3BPS6 as seed ortholog is 100%.

Group of orthologs #246. Best score 456 bits
Score difference with first non-orthologous sequence - C.reinhardtii:38 P.pallidum:456

A8ILR9              	100.00%		D3BUD7              	100.00%
                    	       		D3BKB8              	20.18%
Bootstrap support for A8ILR9 as seed ortholog is 88%.
Bootstrap support for D3BUD7 as seed ortholog is 100%.

Group of orthologs #247. Best score 456 bits
Score difference with first non-orthologous sequence - C.reinhardtii:263 P.pallidum:456

A8HS79              	100.00%		D3BBV3              	100.00%
Bootstrap support for A8HS79 as seed ortholog is 100%.
Bootstrap support for D3BBV3 as seed ortholog is 100%.

Group of orthologs #248. Best score 453 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 P.pallidum:202

A8HQY2              	100.00%		D3AVH5              	100.00%
Bootstrap support for A8HQY2 as seed ortholog is 99%.
Bootstrap support for D3AVH5 as seed ortholog is 99%.

Group of orthologs #249. Best score 453 bits
Score difference with first non-orthologous sequence - C.reinhardtii:453 P.pallidum:453

A8I1W3              	100.00%		D3BTW9              	100.00%
Bootstrap support for A8I1W3 as seed ortholog is 100%.
Bootstrap support for D3BTW9 as seed ortholog is 100%.

Group of orthologs #250. Best score 452 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.pallidum:452

A8HWC2              	100.00%		D3B2T4              	100.00%
Bootstrap support for A8HWC2 as seed ortholog is 93%.
Bootstrap support for D3B2T4 as seed ortholog is 100%.

Group of orthologs #251. Best score 452 bits
Score difference with first non-orthologous sequence - C.reinhardtii:452 P.pallidum:452

A8JF71              	100.00%		D3AVG7              	100.00%
Bootstrap support for A8JF71 as seed ortholog is 100%.
Bootstrap support for D3AVG7 as seed ortholog is 100%.

Group of orthologs #252. Best score 451 bits
Score difference with first non-orthologous sequence - C.reinhardtii:451 P.pallidum:451

A8ITF6              	100.00%		D3B5Y1              	100.00%
Bootstrap support for A8ITF6 as seed ortholog is 100%.
Bootstrap support for D3B5Y1 as seed ortholog is 100%.

Group of orthologs #253. Best score 450 bits
Score difference with first non-orthologous sequence - C.reinhardtii:450 P.pallidum:450

A8J5D8              	100.00%		D3BD73              	100.00%
Bootstrap support for A8J5D8 as seed ortholog is 100%.
Bootstrap support for D3BD73 as seed ortholog is 100%.

Group of orthologs #254. Best score 449 bits
Score difference with first non-orthologous sequence - C.reinhardtii:449 P.pallidum:182

A8IX13              	100.00%		D3B3H4              	100.00%
Bootstrap support for A8IX13 as seed ortholog is 100%.
Bootstrap support for D3B3H4 as seed ortholog is 99%.

Group of orthologs #255. Best score 449 bits
Score difference with first non-orthologous sequence - C.reinhardtii:449 P.pallidum:449

A8IHM8              	100.00%		D3BM76              	100.00%
Bootstrap support for A8IHM8 as seed ortholog is 100%.
Bootstrap support for D3BM76 as seed ortholog is 100%.

Group of orthologs #256. Best score 448 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.pallidum:448

A8HS40              	100.00%		D3BAR8              	100.00%
Bootstrap support for A8HS40 as seed ortholog is 98%.
Bootstrap support for D3BAR8 as seed ortholog is 100%.

Group of orthologs #257. Best score 447 bits
Score difference with first non-orthologous sequence - C.reinhardtii:10 P.pallidum:372

A8I882              	100.00%		D3AY64              	100.00%
Bootstrap support for A8I882 as seed ortholog is 60%.
Alternative seed ortholog is A8I495 (10 bits away from this cluster)
Bootstrap support for D3AY64 as seed ortholog is 100%.

Group of orthologs #258. Best score 446 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 P.pallidum:221

A8ICS4              	100.00%		D3B6C6              	100.00%
Bootstrap support for A8ICS4 as seed ortholog is 100%.
Bootstrap support for D3B6C6 as seed ortholog is 100%.

Group of orthologs #259. Best score 445 bits
Score difference with first non-orthologous sequence - C.reinhardtii:365 P.pallidum:445

A8HZ26              	100.00%		D3AYX0              	100.00%
Bootstrap support for A8HZ26 as seed ortholog is 100%.
Bootstrap support for D3AYX0 as seed ortholog is 100%.

Group of orthologs #260. Best score 445 bits
Score difference with first non-orthologous sequence - C.reinhardtii:390 P.pallidum:445

A8I7S0              	100.00%		D3B6R2              	100.00%
Bootstrap support for A8I7S0 as seed ortholog is 100%.
Bootstrap support for D3B6R2 as seed ortholog is 100%.

Group of orthologs #261. Best score 445 bits
Score difference with first non-orthologous sequence - C.reinhardtii:238 P.pallidum:153

A8J280              	100.00%		D3B568              	100.00%
Bootstrap support for A8J280 as seed ortholog is 100%.
Bootstrap support for D3B568 as seed ortholog is 99%.

Group of orthologs #262. Best score 443 bits
Score difference with first non-orthologous sequence - C.reinhardtii:443 P.pallidum:443

A8I9M8              	100.00%		D3B9J3              	100.00%
Bootstrap support for A8I9M8 as seed ortholog is 100%.
Bootstrap support for D3B9J3 as seed ortholog is 100%.

Group of orthologs #263. Best score 443 bits
Score difference with first non-orthologous sequence - C.reinhardtii:443 P.pallidum:443

A8IRT6              	100.00%		D3BEX2              	100.00%
Bootstrap support for A8IRT6 as seed ortholog is 100%.
Bootstrap support for D3BEX2 as seed ortholog is 100%.

Group of orthologs #264. Best score 442 bits
Score difference with first non-orthologous sequence - C.reinhardtii:442 P.pallidum:442

A8HN92              	100.00%		D3BE93              	100.00%
Bootstrap support for A8HN92 as seed ortholog is 100%.
Bootstrap support for D3BE93 as seed ortholog is 100%.

Group of orthologs #265. Best score 441 bits
Score difference with first non-orthologous sequence - C.reinhardtii:441 P.pallidum:370

A8JHC9              	100.00%		D3B4P1              	100.00%
Bootstrap support for A8JHC9 as seed ortholog is 100%.
Bootstrap support for D3B4P1 as seed ortholog is 100%.

Group of orthologs #266. Best score 439 bits
Score difference with first non-orthologous sequence - C.reinhardtii:439 P.pallidum:439

A8HXQ8              	100.00%		D3BU07              	100.00%
Bootstrap support for A8HXQ8 as seed ortholog is 100%.
Bootstrap support for D3BU07 as seed ortholog is 100%.

Group of orthologs #267. Best score 439 bits
Score difference with first non-orthologous sequence - C.reinhardtii:439 P.pallidum:439

A8JCY9              	100.00%		D3BF15              	100.00%
Bootstrap support for A8JCY9 as seed ortholog is 100%.
Bootstrap support for D3BF15 as seed ortholog is 100%.

Group of orthologs #268. Best score 435 bits
Score difference with first non-orthologous sequence - C.reinhardtii:349 P.pallidum:374

A8IAM9              	100.00%		D3BR60              	100.00%
Bootstrap support for A8IAM9 as seed ortholog is 100%.
Bootstrap support for D3BR60 as seed ortholog is 100%.

Group of orthologs #269. Best score 434 bits
Score difference with first non-orthologous sequence - C.reinhardtii:434 P.pallidum:434

A8IWF2              	100.00%		D3AZD2              	100.00%
Bootstrap support for A8IWF2 as seed ortholog is 100%.
Bootstrap support for D3AZD2 as seed ortholog is 100%.

Group of orthologs #270. Best score 434 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 P.pallidum:434

A8IVR6              	100.00%		D3B0M1              	100.00%
Bootstrap support for A8IVR6 as seed ortholog is 99%.
Bootstrap support for D3B0M1 as seed ortholog is 100%.

Group of orthologs #271. Best score 434 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 P.pallidum:234

A8JH58              	100.00%		D3AZ71              	100.00%
Bootstrap support for A8JH58 as seed ortholog is 99%.
Bootstrap support for D3AZ71 as seed ortholog is 100%.

Group of orthologs #272. Best score 432 bits
Score difference with first non-orthologous sequence - C.reinhardtii:432 P.pallidum:432

A8IQ05              	100.00%		D3B6H9              	100.00%
                    	       		D3B3G3              	12.33%
Bootstrap support for A8IQ05 as seed ortholog is 100%.
Bootstrap support for D3B6H9 as seed ortholog is 100%.

Group of orthologs #273. Best score 432 bits
Score difference with first non-orthologous sequence - C.reinhardtii:375 P.pallidum:231

A8J3F9              	100.00%		D3BCL5              	100.00%
Bootstrap support for A8J3F9 as seed ortholog is 100%.
Bootstrap support for D3BCL5 as seed ortholog is 100%.

Group of orthologs #274. Best score 431 bits
Score difference with first non-orthologous sequence - C.reinhardtii:172 P.pallidum:431

A8JHR9              	100.00%		D3BV45              	100.00%
Bootstrap support for A8JHR9 as seed ortholog is 100%.
Bootstrap support for D3BV45 as seed ortholog is 100%.

Group of orthologs #275. Best score 430 bits
Score difference with first non-orthologous sequence - C.reinhardtii:336 P.pallidum:344

A8HZA9              	100.00%		D3AVR8              	100.00%
Bootstrap support for A8HZA9 as seed ortholog is 100%.
Bootstrap support for D3AVR8 as seed ortholog is 100%.

Group of orthologs #276. Best score 428 bits
Score difference with first non-orthologous sequence - C.reinhardtii:428 P.pallidum:428

A8HPD2              	100.00%		D3BFI2              	100.00%
Bootstrap support for A8HPD2 as seed ortholog is 100%.
Bootstrap support for D3BFI2 as seed ortholog is 100%.

Group of orthologs #277. Best score 427 bits
Score difference with first non-orthologous sequence - C.reinhardtii:427 P.pallidum:427

A8J2Z8              	100.00%		D3BAK8              	100.00%
Bootstrap support for A8J2Z8 as seed ortholog is 100%.
Bootstrap support for D3BAK8 as seed ortholog is 100%.

Group of orthologs #278. Best score 426 bits
Score difference with first non-orthologous sequence - C.reinhardtii:213 P.pallidum:249

A8HQS1              	100.00%		D3BKN4              	100.00%
Bootstrap support for A8HQS1 as seed ortholog is 100%.
Bootstrap support for D3BKN4 as seed ortholog is 100%.

Group of orthologs #279. Best score 426 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 P.pallidum:426

A8J0R7              	100.00%		D3BK71              	100.00%
Bootstrap support for A8J0R7 as seed ortholog is 99%.
Bootstrap support for D3BK71 as seed ortholog is 100%.

Group of orthologs #280. Best score 425 bits
Score difference with first non-orthologous sequence - C.reinhardtii:425 P.pallidum:425

A8J5R5              	100.00%		D3AWL5              	100.00%
Bootstrap support for A8J5R5 as seed ortholog is 100%.
Bootstrap support for D3AWL5 as seed ortholog is 100%.

Group of orthologs #281. Best score 425 bits
Score difference with first non-orthologous sequence - C.reinhardtii:425 P.pallidum:325

A8J760              	100.00%		D3BEV0              	100.00%
Bootstrap support for A8J760 as seed ortholog is 100%.
Bootstrap support for D3BEV0 as seed ortholog is 100%.

Group of orthologs #282. Best score 424 bits
Score difference with first non-orthologous sequence - C.reinhardtii:424 P.pallidum:424

A8IWK3              	100.00%		D3BBU3              	100.00%
Bootstrap support for A8IWK3 as seed ortholog is 100%.
Bootstrap support for D3BBU3 as seed ortholog is 100%.

Group of orthologs #283. Best score 421 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 P.pallidum:421

A8J7E4              	100.00%		D3AVT5              	100.00%
Bootstrap support for A8J7E4 as seed ortholog is 100%.
Bootstrap support for D3AVT5 as seed ortholog is 100%.

Group of orthologs #284. Best score 420 bits
Score difference with first non-orthologous sequence - C.reinhardtii:420 P.pallidum:420

A8J5Y9              	100.00%		D3AY61              	100.00%
Bootstrap support for A8J5Y9 as seed ortholog is 100%.
Bootstrap support for D3AY61 as seed ortholog is 100%.

Group of orthologs #285. Best score 420 bits
Score difference with first non-orthologous sequence - C.reinhardtii:420 P.pallidum:246

A8II74              	100.00%		D3BJ28              	100.00%
Bootstrap support for A8II74 as seed ortholog is 100%.
Bootstrap support for D3BJ28 as seed ortholog is 100%.

Group of orthologs #286. Best score 420 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 P.pallidum:420

A8I263              	100.00%		D3BTH8              	100.00%
Bootstrap support for A8I263 as seed ortholog is 90%.
Bootstrap support for D3BTH8 as seed ortholog is 100%.

Group of orthologs #287. Best score 419 bits
Score difference with first non-orthologous sequence - C.reinhardtii:419 P.pallidum:419

A8J1Z0              	100.00%		D3AZS9              	100.00%
Bootstrap support for A8J1Z0 as seed ortholog is 100%.
Bootstrap support for D3AZS9 as seed ortholog is 100%.

Group of orthologs #288. Best score 418 bits
Score difference with first non-orthologous sequence - C.reinhardtii:418 P.pallidum:418

A8I523              	100.00%		D3B2U3              	100.00%
Bootstrap support for A8I523 as seed ortholog is 100%.
Bootstrap support for D3B2U3 as seed ortholog is 100%.

Group of orthologs #289. Best score 418 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 P.pallidum:305

A8J1F4              	100.00%		D3B3W0              	100.00%
Bootstrap support for A8J1F4 as seed ortholog is 99%.
Bootstrap support for D3B3W0 as seed ortholog is 100%.

Group of orthologs #290. Best score 416 bits
Score difference with first non-orthologous sequence - C.reinhardtii:416 P.pallidum:416

A8J0K7              	100.00%		D3B6R8              	100.00%
Bootstrap support for A8J0K7 as seed ortholog is 100%.
Bootstrap support for D3B6R8 as seed ortholog is 100%.

Group of orthologs #291. Best score 416 bits
Score difference with first non-orthologous sequence - C.reinhardtii:416 P.pallidum:416

A8JCS4              	100.00%		D3BMS6              	100.00%
Bootstrap support for A8JCS4 as seed ortholog is 100%.
Bootstrap support for D3BMS6 as seed ortholog is 100%.

Group of orthologs #292. Best score 415 bits
Score difference with first non-orthologous sequence - C.reinhardtii:415 P.pallidum:415

A8I988              	100.00%		D3B6E7              	100.00%
Bootstrap support for A8I988 as seed ortholog is 100%.
Bootstrap support for D3B6E7 as seed ortholog is 100%.

Group of orthologs #293. Best score 415 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 P.pallidum:310

A8IDE3              	100.00%		D3BES8              	100.00%
Bootstrap support for A8IDE3 as seed ortholog is 99%.
Bootstrap support for D3BES8 as seed ortholog is 100%.

Group of orthologs #294. Best score 415 bits
Score difference with first non-orthologous sequence - C.reinhardtii:415 P.pallidum:415

A8J0I0              	100.00%		D3BJC7              	100.00%
Bootstrap support for A8J0I0 as seed ortholog is 100%.
Bootstrap support for D3BJC7 as seed ortholog is 100%.

Group of orthologs #295. Best score 414 bits
Score difference with first non-orthologous sequence - C.reinhardtii:414 P.pallidum:149

A8HM38              	100.00%		D3BPC8              	100.00%
Bootstrap support for A8HM38 as seed ortholog is 100%.
Bootstrap support for D3BPC8 as seed ortholog is 99%.

Group of orthologs #296. Best score 412 bits
Score difference with first non-orthologous sequence - C.reinhardtii:412 P.pallidum:412

A8JBE4              	100.00%		D3B3T8              	100.00%
Bootstrap support for A8JBE4 as seed ortholog is 100%.
Bootstrap support for D3B3T8 as seed ortholog is 100%.

Group of orthologs #297. Best score 410 bits
Score difference with first non-orthologous sequence - C.reinhardtii:410 P.pallidum:410

A8JGK6              	100.00%		D3BEC2              	100.00%
Bootstrap support for A8JGK6 as seed ortholog is 100%.
Bootstrap support for D3BEC2 as seed ortholog is 100%.

Group of orthologs #298. Best score 409 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.pallidum:409

A8J129              	100.00%		D3AVJ4              	100.00%
Bootstrap support for A8J129 as seed ortholog is 99%.
Bootstrap support for D3AVJ4 as seed ortholog is 100%.

Group of orthologs #299. Best score 408 bits
Score difference with first non-orthologous sequence - C.reinhardtii:325 P.pallidum:311

A8HVL4              	100.00%		D3BMN0              	100.00%
Bootstrap support for A8HVL4 as seed ortholog is 100%.
Bootstrap support for D3BMN0 as seed ortholog is 100%.

Group of orthologs #300. Best score 408 bits
Score difference with first non-orthologous sequence - C.reinhardtii:408 P.pallidum:408

A8JB97              	100.00%		D3BV78              	100.00%
Bootstrap support for A8JB97 as seed ortholog is 100%.
Bootstrap support for D3BV78 as seed ortholog is 100%.

Group of orthologs #301. Best score 406 bits
Score difference with first non-orthologous sequence - C.reinhardtii:269 P.pallidum:311

A8JD37              	100.00%		D3B3C8              	100.00%
Bootstrap support for A8JD37 as seed ortholog is 100%.
Bootstrap support for D3B3C8 as seed ortholog is 100%.

Group of orthologs #302. Best score 406 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 P.pallidum:202

A8J3M6              	100.00%		D3BDI4              	100.00%
Bootstrap support for A8J3M6 as seed ortholog is 99%.
Bootstrap support for D3BDI4 as seed ortholog is 99%.

Group of orthologs #303. Best score 405 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 P.pallidum:180

A8IEF3              	100.00%		D3B626              	100.00%
Bootstrap support for A8IEF3 as seed ortholog is 100%.
Bootstrap support for D3B626 as seed ortholog is 100%.

Group of orthologs #304. Best score 405 bits
Score difference with first non-orthologous sequence - C.reinhardtii:405 P.pallidum:405

A8I0Z4              	100.00%		D3BNF4              	100.00%
Bootstrap support for A8I0Z4 as seed ortholog is 100%.
Bootstrap support for D3BNF4 as seed ortholog is 100%.

Group of orthologs #305. Best score 405 bits
Score difference with first non-orthologous sequence - C.reinhardtii:405 P.pallidum:405

A8JCG5              	100.00%		D3BKC5              	100.00%
Bootstrap support for A8JCG5 as seed ortholog is 100%.
Bootstrap support for D3BKC5 as seed ortholog is 100%.

Group of orthologs #306. Best score 404 bits
Score difference with first non-orthologous sequence - C.reinhardtii:404 P.pallidum:404

A8HM54              	100.00%		D3B4I5              	100.00%
Bootstrap support for A8HM54 as seed ortholog is 100%.
Bootstrap support for D3B4I5 as seed ortholog is 100%.

Group of orthologs #307. Best score 404 bits
Score difference with first non-orthologous sequence - C.reinhardtii:404 P.pallidum:404

A8HQU3              	100.00%		D3BQ86              	100.00%
Bootstrap support for A8HQU3 as seed ortholog is 100%.
Bootstrap support for D3BQ86 as seed ortholog is 100%.

Group of orthologs #308. Best score 403 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 P.pallidum:227

A8HQF5              	100.00%		D3B1I2              	100.00%
Bootstrap support for A8HQF5 as seed ortholog is 99%.
Bootstrap support for D3B1I2 as seed ortholog is 100%.

Group of orthologs #309. Best score 403 bits
Score difference with first non-orthologous sequence - C.reinhardtii:403 P.pallidum:403

A8HS05              	100.00%		D3BNT9              	100.00%
Bootstrap support for A8HS05 as seed ortholog is 100%.
Bootstrap support for D3BNT9 as seed ortholog is 100%.

Group of orthologs #310. Best score 402 bits
Score difference with first non-orthologous sequence - C.reinhardtii:402 P.pallidum:207

A8J018              	100.00%		D3B7J9              	100.00%
Bootstrap support for A8J018 as seed ortholog is 100%.
Bootstrap support for D3B7J9 as seed ortholog is 99%.

Group of orthologs #311. Best score 401 bits
Score difference with first non-orthologous sequence - C.reinhardtii:401 P.pallidum:401

A8IA86              	100.00%		D3B7T8              	100.00%
Bootstrap support for A8IA86 as seed ortholog is 100%.
Bootstrap support for D3B7T8 as seed ortholog is 100%.

Group of orthologs #312. Best score 401 bits
Score difference with first non-orthologous sequence - C.reinhardtii:401 P.pallidum:401

A8HYQ1              	100.00%		D3BQ08              	100.00%
Bootstrap support for A8HYQ1 as seed ortholog is 100%.
Bootstrap support for D3BQ08 as seed ortholog is 100%.

Group of orthologs #313. Best score 401 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 P.pallidum:401

A8J6G8              	100.00%		D3BVP7              	100.00%
Bootstrap support for A8J6G8 as seed ortholog is 99%.
Bootstrap support for D3BVP7 as seed ortholog is 100%.

Group of orthologs #314. Best score 401 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.pallidum:304

Q6Q242              	100.00%		D3BI15              	100.00%
Bootstrap support for Q6Q242 as seed ortholog is 98%.
Bootstrap support for D3BI15 as seed ortholog is 100%.

Group of orthologs #315. Best score 400 bits
Score difference with first non-orthologous sequence - C.reinhardtii:333 P.pallidum:400

A8JAG1              	100.00%		D3AW13              	100.00%
Bootstrap support for A8JAG1 as seed ortholog is 100%.
Bootstrap support for D3AW13 as seed ortholog is 100%.

Group of orthologs #316. Best score 399 bits
Score difference with first non-orthologous sequence - C.reinhardtii:399 P.pallidum:399

A8IDY0              	100.00%		D3B606              	100.00%
Bootstrap support for A8IDY0 as seed ortholog is 100%.
Bootstrap support for D3B606 as seed ortholog is 100%.

Group of orthologs #317. Best score 399 bits
Score difference with first non-orthologous sequence - C.reinhardtii:399 P.pallidum:224

A8J0X4              	100.00%		D3BCX1              	100.00%
Bootstrap support for A8J0X4 as seed ortholog is 100%.
Bootstrap support for D3BCX1 as seed ortholog is 100%.

Group of orthologs #318. Best score 398 bits
Score difference with first non-orthologous sequence - C.reinhardtii:398 P.pallidum:398

A8HU09              	100.00%		D3BCL1              	100.00%
Bootstrap support for A8HU09 as seed ortholog is 100%.
Bootstrap support for D3BCL1 as seed ortholog is 100%.

Group of orthologs #319. Best score 398 bits
Score difference with first non-orthologous sequence - C.reinhardtii:285 P.pallidum:292

A8J1A0              	100.00%		D3B0D7              	100.00%
Bootstrap support for A8J1A0 as seed ortholog is 100%.
Bootstrap support for D3B0D7 as seed ortholog is 100%.

Group of orthologs #320. Best score 398 bits
Score difference with first non-orthologous sequence - C.reinhardtii:398 P.pallidum:398

A8IWV0              	100.00%		D3B6X9              	100.00%
Bootstrap support for A8IWV0 as seed ortholog is 100%.
Bootstrap support for D3B6X9 as seed ortholog is 100%.

Group of orthologs #321. Best score 396 bits
Score difference with first non-orthologous sequence - C.reinhardtii:396 P.pallidum:396

A8J537              	100.00%		D3B731              	100.00%
Bootstrap support for A8J537 as seed ortholog is 100%.
Bootstrap support for D3B731 as seed ortholog is 100%.

Group of orthologs #322. Best score 395 bits
Score difference with first non-orthologous sequence - C.reinhardtii:338 P.pallidum:395

A8IKR1              	100.00%		D3AZX3              	100.00%
Bootstrap support for A8IKR1 as seed ortholog is 100%.
Bootstrap support for D3AZX3 as seed ortholog is 100%.

Group of orthologs #323. Best score 394 bits
Score difference with first non-orthologous sequence - C.reinhardtii:394 P.pallidum:394

A8HQF0              	100.00%		D3BAM6              	100.00%
Bootstrap support for A8HQF0 as seed ortholog is 100%.
Bootstrap support for D3BAM6 as seed ortholog is 100%.

Group of orthologs #324. Best score 394 bits
Score difference with first non-orthologous sequence - C.reinhardtii:394 P.pallidum:214

A8IWJ5              	100.00%		D3AYA4              	100.00%
Bootstrap support for A8IWJ5 as seed ortholog is 100%.
Bootstrap support for D3AYA4 as seed ortholog is 99%.

Group of orthologs #325. Best score 394 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 P.pallidum:394

A8JBC7              	100.00%		D3BCH5              	100.00%
Bootstrap support for A8JBC7 as seed ortholog is 100%.
Bootstrap support for D3BCH5 as seed ortholog is 100%.

Group of orthologs #326. Best score 393 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.pallidum:187

Q9FXT7              	100.00%		D3BBN0              	100.00%
A8IKD6              	18.69%		
A8IKE3              	14.90%		
Bootstrap support for Q9FXT7 as seed ortholog is 99%.
Bootstrap support for D3BBN0 as seed ortholog is 100%.

Group of orthologs #327. Best score 393 bits
Score difference with first non-orthologous sequence - C.reinhardtii:254 P.pallidum:301

A8J8Y1              	100.00%		D3BE97              	100.00%
Bootstrap support for A8J8Y1 as seed ortholog is 100%.
Bootstrap support for D3BE97 as seed ortholog is 100%.

Group of orthologs #328. Best score 390 bits
Score difference with first non-orthologous sequence - C.reinhardtii:390 P.pallidum:390

A8HPA0              	100.00%		D3B2H8              	100.00%
Bootstrap support for A8HPA0 as seed ortholog is 100%.
Bootstrap support for D3B2H8 as seed ortholog is 100%.

Group of orthologs #329. Best score 389 bits
Score difference with first non-orthologous sequence - C.reinhardtii:241 P.pallidum:241

A8ITS8              	100.00%		D3BV44              	100.00%
Bootstrap support for A8ITS8 as seed ortholog is 100%.
Bootstrap support for D3BV44 as seed ortholog is 100%.

Group of orthologs #330. Best score 388 bits
Score difference with first non-orthologous sequence - C.reinhardtii:278 P.pallidum:301

A8HYR9              	100.00%		D3AVU2              	100.00%
Bootstrap support for A8HYR9 as seed ortholog is 100%.
Bootstrap support for D3AVU2 as seed ortholog is 100%.

Group of orthologs #331. Best score 388 bits
Score difference with first non-orthologous sequence - C.reinhardtii:388 P.pallidum:388

A8HRS5              	100.00%		D3BJL2              	100.00%
Bootstrap support for A8HRS5 as seed ortholog is 100%.
Bootstrap support for D3BJL2 as seed ortholog is 100%.

Group of orthologs #332. Best score 388 bits
Score difference with first non-orthologous sequence - C.reinhardtii:388 P.pallidum:388

A8IGM2              	100.00%		D3BEF1              	100.00%
Bootstrap support for A8IGM2 as seed ortholog is 100%.
Bootstrap support for D3BEF1 as seed ortholog is 100%.

Group of orthologs #333. Best score 387 bits
Score difference with first non-orthologous sequence - C.reinhardtii:387 P.pallidum:387

A8IK52              	100.00%		D3B3Z7              	100.00%
Bootstrap support for A8IK52 as seed ortholog is 100%.
Bootstrap support for D3B3Z7 as seed ortholog is 100%.

Group of orthologs #334. Best score 387 bits
Score difference with first non-orthologous sequence - C.reinhardtii:387 P.pallidum:387

A8I274              	100.00%		D3BQJ7              	100.00%
Bootstrap support for A8I274 as seed ortholog is 100%.
Bootstrap support for D3BQJ7 as seed ortholog is 100%.

Group of orthologs #335. Best score 387 bits
Score difference with first non-orthologous sequence - C.reinhardtii:387 P.pallidum:387

A8I901              	100.00%		D3BTM5              	100.00%
Bootstrap support for A8I901 as seed ortholog is 100%.
Bootstrap support for D3BTM5 as seed ortholog is 100%.

Group of orthologs #336. Best score 387 bits
Score difference with first non-orthologous sequence - C.reinhardtii:387 P.pallidum:387

A8J4X2              	100.00%		D3BMH9              	100.00%
Bootstrap support for A8J4X2 as seed ortholog is 100%.
Bootstrap support for D3BMH9 as seed ortholog is 100%.

Group of orthologs #337. Best score 386 bits
Score difference with first non-orthologous sequence - C.reinhardtii:386 P.pallidum:386

A8IWM1              	100.00%		D3B222              	100.00%
                    	       		D3BIK5              	38.48%
                    	       		D3BIK6              	35.74%
Bootstrap support for A8IWM1 as seed ortholog is 100%.
Bootstrap support for D3B222 as seed ortholog is 100%.

Group of orthologs #338. Best score 386 bits
Score difference with first non-orthologous sequence - C.reinhardtii:386 P.pallidum:386

A8IS72              	100.00%		D3BP70              	100.00%
Bootstrap support for A8IS72 as seed ortholog is 100%.
Bootstrap support for D3BP70 as seed ortholog is 100%.

Group of orthologs #339. Best score 385 bits
Score difference with first non-orthologous sequence - C.reinhardtii:385 P.pallidum:385

A8IRV0              	100.00%		D3AWT2              	100.00%
Bootstrap support for A8IRV0 as seed ortholog is 100%.
Bootstrap support for D3AWT2 as seed ortholog is 100%.

Group of orthologs #340. Best score 385 bits
Score difference with first non-orthologous sequence - C.reinhardtii:385 P.pallidum:385

A8J6M3              	100.00%		D3BRX9              	100.00%
Bootstrap support for A8J6M3 as seed ortholog is 100%.
Bootstrap support for D3BRX9 as seed ortholog is 100%.

Group of orthologs #341. Best score 384 bits
Score difference with first non-orthologous sequence - C.reinhardtii:384 P.pallidum:384

A8JG34              	100.00%		D3AWV7              	100.00%
                    	       		D3BEX8              	38.69%
                    	       		D3BRR0              	31.39%
                    	       		D3BRA2              	29.69%
                    	       		D3BUF4              	26.41%
Bootstrap support for A8JG34 as seed ortholog is 100%.
Bootstrap support for D3AWV7 as seed ortholog is 100%.

Group of orthologs #342. Best score 384 bits
Score difference with first non-orthologous sequence - C.reinhardtii:384 P.pallidum:384

A8JFC4              	100.00%		D3AYC8              	100.00%
Bootstrap support for A8JFC4 as seed ortholog is 100%.
Bootstrap support for D3AYC8 as seed ortholog is 100%.

Group of orthologs #343. Best score 383 bits
Score difference with first non-orthologous sequence - C.reinhardtii:383 P.pallidum:383

A8J027              	100.00%		D3B6K6              	100.00%
Bootstrap support for A8J027 as seed ortholog is 100%.
Bootstrap support for D3B6K6 as seed ortholog is 100%.

Group of orthologs #344. Best score 383 bits
Score difference with first non-orthologous sequence - C.reinhardtii:383 P.pallidum:383

A8J5P7              	100.00%		D3B6D9              	100.00%
Bootstrap support for A8J5P7 as seed ortholog is 100%.
Bootstrap support for D3B6D9 as seed ortholog is 100%.

Group of orthologs #345. Best score 383 bits
Score difference with first non-orthologous sequence - C.reinhardtii:383 P.pallidum:173

A8JA80              	100.00%		D3BEH8              	100.00%
Bootstrap support for A8JA80 as seed ortholog is 100%.
Bootstrap support for D3BEH8 as seed ortholog is 99%.

Group of orthologs #346. Best score 382 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.pallidum:212

A8HMC7              	100.00%		D3AZC2              	100.00%
                    	       		D3BBK0              	15.30%
                    	       		D3B6W9              	5.72%
                    	       		D3BAX3              	5.56%
                    	       		D3BP98              	5.49%
Bootstrap support for A8HMC7 as seed ortholog is 95%.
Bootstrap support for D3AZC2 as seed ortholog is 99%.

Group of orthologs #347. Best score 382 bits
Score difference with first non-orthologous sequence - C.reinhardtii:382 P.pallidum:382

A8IZ76              	100.00%		D3BCC8              	100.00%
A8JAD6              	24.42%		
A8J3A1              	8.89%		
Bootstrap support for A8IZ76 as seed ortholog is 100%.
Bootstrap support for D3BCC8 as seed ortholog is 100%.

Group of orthologs #348. Best score 382 bits
Score difference with first non-orthologous sequence - C.reinhardtii:382 P.pallidum:188

A8I780              	100.00%		D3BKC7              	100.00%
Q8LKG7              	100.00%		
Bootstrap support for A8I780 as seed ortholog is 100%.
Bootstrap support for Q8LKG7 as seed ortholog is 100%.
Bootstrap support for D3BKC7 as seed ortholog is 100%.

Group of orthologs #349. Best score 382 bits
Score difference with first non-orthologous sequence - C.reinhardtii:382 P.pallidum:382

A8IFG0              	100.00%		D3B298              	100.00%
Bootstrap support for A8IFG0 as seed ortholog is 100%.
Bootstrap support for D3B298 as seed ortholog is 100%.

Group of orthologs #350. Best score 382 bits
Score difference with first non-orthologous sequence - C.reinhardtii:382 P.pallidum:382

A8IRV6              	100.00%		D3BQG1              	100.00%
Bootstrap support for A8IRV6 as seed ortholog is 100%.
Bootstrap support for D3BQG1 as seed ortholog is 100%.

Group of orthologs #351. Best score 381 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 P.pallidum:236

A8HME7              	100.00%		D3B528              	100.00%
Bootstrap support for A8HME7 as seed ortholog is 97%.
Bootstrap support for D3B528 as seed ortholog is 100%.

Group of orthologs #352. Best score 380 bits
Score difference with first non-orthologous sequence - C.reinhardtii:285 P.pallidum:313

A8JDD2              	100.00%		D3BR68              	100.00%
Bootstrap support for A8JDD2 as seed ortholog is 100%.
Bootstrap support for D3BR68 as seed ortholog is 100%.

Group of orthologs #353. Best score 379 bits
Score difference with first non-orthologous sequence - C.reinhardtii:379 P.pallidum:379

A8IE23              	100.00%		D3BPW9              	100.00%
Bootstrap support for A8IE23 as seed ortholog is 100%.
Bootstrap support for D3BPW9 as seed ortholog is 100%.

Group of orthologs #354. Best score 379 bits
Score difference with first non-orthologous sequence - C.reinhardtii:379 P.pallidum:379

A8J5W8              	100.00%		D3BNN4              	100.00%
Bootstrap support for A8J5W8 as seed ortholog is 100%.
Bootstrap support for D3BNN4 as seed ortholog is 100%.

Group of orthologs #355. Best score 377 bits
Score difference with first non-orthologous sequence - C.reinhardtii:377 P.pallidum:377

A8JE71              	100.00%		D3BGK7              	100.00%
                    	       		D3AZH7              	32.00%
Bootstrap support for A8JE71 as seed ortholog is 100%.
Bootstrap support for D3BGK7 as seed ortholog is 100%.

Group of orthologs #356. Best score 376 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 P.pallidum:12

A8I1P3              	100.00%		D3B968              	100.00%
Bootstrap support for A8I1P3 as seed ortholog is 96%.
Bootstrap support for D3B968 as seed ortholog is 66%.
Alternative seed ortholog is D3BMU7 (12 bits away from this cluster)

Group of orthologs #357. Best score 376 bits
Score difference with first non-orthologous sequence - C.reinhardtii:18 P.pallidum:376

A8JGF7              	100.00%		D3B481              	100.00%
Bootstrap support for A8JGF7 as seed ortholog is 70%.
Alternative seed ortholog is A8I2V9 (18 bits away from this cluster)
Bootstrap support for D3B481 as seed ortholog is 100%.

Group of orthologs #358. Best score 375 bits
Score difference with first non-orthologous sequence - C.reinhardtii:285 P.pallidum:375

A8IVK1              	100.00%		D3BFD7              	100.00%
Bootstrap support for A8IVK1 as seed ortholog is 100%.
Bootstrap support for D3BFD7 as seed ortholog is 100%.

Group of orthologs #359. Best score 375 bits
Score difference with first non-orthologous sequence - C.reinhardtii:375 P.pallidum:375

A8IYD3              	100.00%		D3BK65              	100.00%
Bootstrap support for A8IYD3 as seed ortholog is 100%.
Bootstrap support for D3BK65 as seed ortholog is 100%.

Group of orthologs #360. Best score 373 bits
Score difference with first non-orthologous sequence - C.reinhardtii:249 P.pallidum:263

A8HY75              	100.00%		D3BVR5              	100.00%
Bootstrap support for A8HY75 as seed ortholog is 100%.
Bootstrap support for D3BVR5 as seed ortholog is 100%.

Group of orthologs #361. Best score 373 bits
Score difference with first non-orthologous sequence - C.reinhardtii:373 P.pallidum:373

A8JFT1              	100.00%		D3BSF9              	100.00%
Bootstrap support for A8JFT1 as seed ortholog is 100%.
Bootstrap support for D3BSF9 as seed ortholog is 100%.

Group of orthologs #362. Best score 371 bits
Score difference with first non-orthologous sequence - C.reinhardtii:371 P.pallidum:265

A8J7U7              	100.00%		D3BA80              	100.00%
Bootstrap support for A8J7U7 as seed ortholog is 100%.
Bootstrap support for D3BA80 as seed ortholog is 100%.

Group of orthologs #363. Best score 370 bits
Score difference with first non-orthologous sequence - C.reinhardtii:370 P.pallidum:370

A8I0M0              	100.00%		D3B4Z7              	100.00%
Bootstrap support for A8I0M0 as seed ortholog is 100%.
Bootstrap support for D3B4Z7 as seed ortholog is 100%.

Group of orthologs #364. Best score 370 bits
Score difference with first non-orthologous sequence - C.reinhardtii:370 P.pallidum:370

A8JBB2              	100.00%		D3BB01              	100.00%
Bootstrap support for A8JBB2 as seed ortholog is 100%.
Bootstrap support for D3BB01 as seed ortholog is 100%.

Group of orthologs #365. Best score 367 bits
Score difference with first non-orthologous sequence - C.reinhardtii:367 P.pallidum:367

A8ILT1              	100.00%		D3AWC6              	100.00%
Bootstrap support for A8ILT1 as seed ortholog is 100%.
Bootstrap support for D3AWC6 as seed ortholog is 100%.

Group of orthologs #366. Best score 367 bits
Score difference with first non-orthologous sequence - C.reinhardtii:239 P.pallidum:224

A8ITM4              	100.00%		D3BP59              	100.00%
Bootstrap support for A8ITM4 as seed ortholog is 100%.
Bootstrap support for D3BP59 as seed ortholog is 100%.

Group of orthologs #367. Best score 366 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 P.pallidum:366

A8IMV2              	100.00%		D3AW45              	100.00%
Bootstrap support for A8IMV2 as seed ortholog is 96%.
Bootstrap support for D3AW45 as seed ortholog is 100%.

Group of orthologs #368. Best score 366 bits
Score difference with first non-orthologous sequence - C.reinhardtii:366 P.pallidum:366

A8JG49              	100.00%		D3BIF2              	100.00%
Bootstrap support for A8JG49 as seed ortholog is 100%.
Bootstrap support for D3BIF2 as seed ortholog is 100%.

Group of orthologs #369. Best score 364 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.pallidum:127

A8IYY0              	100.00%		D3BDH0              	100.00%
Bootstrap support for A8IYY0 as seed ortholog is 93%.
Bootstrap support for D3BDH0 as seed ortholog is 99%.

Group of orthologs #370. Best score 364 bits
Score difference with first non-orthologous sequence - C.reinhardtii:364 P.pallidum:364

A8J2Z9              	100.00%		D3BN56              	100.00%
Bootstrap support for A8J2Z9 as seed ortholog is 100%.
Bootstrap support for D3BN56 as seed ortholog is 100%.

Group of orthologs #371. Best score 363 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 P.pallidum:363

A8J9S9              	100.00%		D3BE81              	100.00%
                    	       		D3BCT5              	33.78%
Bootstrap support for A8J9S9 as seed ortholog is 99%.
Bootstrap support for D3BE81 as seed ortholog is 100%.

Group of orthologs #372. Best score 362 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 P.pallidum:228

A8J9W4              	100.00%		D3B5B2              	100.00%
Bootstrap support for A8J9W4 as seed ortholog is 99%.
Bootstrap support for D3B5B2 as seed ortholog is 100%.

Group of orthologs #373. Best score 361 bits
Score difference with first non-orthologous sequence - C.reinhardtii:361 P.pallidum:361

A8HTR3              	100.00%		D3BRT9              	100.00%
Bootstrap support for A8HTR3 as seed ortholog is 100%.
Bootstrap support for D3BRT9 as seed ortholog is 100%.

Group of orthologs #374. Best score 361 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.pallidum:188

A8JGV6              	100.00%		D3AVX5              	100.00%
Bootstrap support for A8JGV6 as seed ortholog is 99%.
Bootstrap support for D3AVX5 as seed ortholog is 100%.

Group of orthologs #375. Best score 360 bits
Score difference with first non-orthologous sequence - C.reinhardtii:265 P.pallidum:360

A8J933              	100.00%		D3BGV8              	100.00%
Bootstrap support for A8J933 as seed ortholog is 100%.
Bootstrap support for D3BGV8 as seed ortholog is 100%.

Group of orthologs #376. Best score 359 bits
Score difference with first non-orthologous sequence - C.reinhardtii:359 P.pallidum:359

A8IWJ3              	100.00%		D3B0J0              	100.00%
Bootstrap support for A8IWJ3 as seed ortholog is 100%.
Bootstrap support for D3B0J0 as seed ortholog is 100%.

Group of orthologs #377. Best score 359 bits
Score difference with first non-orthologous sequence - C.reinhardtii:359 P.pallidum:359

A8IYL4              	100.00%		D3BCR2              	100.00%
Bootstrap support for A8IYL4 as seed ortholog is 100%.
Bootstrap support for D3BCR2 as seed ortholog is 100%.

Group of orthologs #378. Best score 358 bits
Score difference with first non-orthologous sequence - C.reinhardtii:358 P.pallidum:275

A8HMQ7              	100.00%		D3BI40              	100.00%
Bootstrap support for A8HMQ7 as seed ortholog is 100%.
Bootstrap support for D3BI40 as seed ortholog is 100%.

Group of orthologs #379. Best score 358 bits
Score difference with first non-orthologous sequence - C.reinhardtii:358 P.pallidum:241

A8IAS5              	100.00%		D3BR29              	100.00%
Bootstrap support for A8IAS5 as seed ortholog is 100%.
Bootstrap support for D3BR29 as seed ortholog is 100%.

Group of orthologs #380. Best score 356 bits
Score difference with first non-orthologous sequence - C.reinhardtii:356 P.pallidum:356

A8J825              	100.00%		D3B5W3              	100.00%
Bootstrap support for A8J825 as seed ortholog is 100%.
Bootstrap support for D3B5W3 as seed ortholog is 100%.

Group of orthologs #381. Best score 356 bits
Score difference with first non-orthologous sequence - C.reinhardtii:356 P.pallidum:356

A8J7D8              	100.00%		D3B6P0              	100.00%
Bootstrap support for A8J7D8 as seed ortholog is 100%.
Bootstrap support for D3B6P0 as seed ortholog is 100%.

Group of orthologs #382. Best score 354 bits
Score difference with first non-orthologous sequence - C.reinhardtii:354 P.pallidum:354

A8IAK4              	100.00%		D3BCN3              	100.00%
Bootstrap support for A8IAK4 as seed ortholog is 100%.
Bootstrap support for D3BCN3 as seed ortholog is 100%.

Group of orthologs #383. Best score 352 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.pallidum:352

A8HMJ8              	100.00%		D3AWC2              	100.00%
Bootstrap support for A8HMJ8 as seed ortholog is 92%.
Bootstrap support for D3AWC2 as seed ortholog is 100%.

Group of orthologs #384. Best score 352 bits
Score difference with first non-orthologous sequence - C.reinhardtii:172 P.pallidum:223

A8ISU1              	100.00%		D3B839              	100.00%
Bootstrap support for A8ISU1 as seed ortholog is 100%.
Bootstrap support for D3B839 as seed ortholog is 100%.

Group of orthologs #385. Best score 352 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 P.pallidum:352

A8I9D0              	100.00%		D3BF70              	100.00%
Bootstrap support for A8I9D0 as seed ortholog is 100%.
Bootstrap support for D3BF70 as seed ortholog is 100%.

Group of orthologs #386. Best score 352 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 P.pallidum:134

A8J8P5              	100.00%		D3BCP7              	100.00%
Bootstrap support for A8J8P5 as seed ortholog is 100%.
Bootstrap support for D3BCP7 as seed ortholog is 100%.

Group of orthologs #387. Best score 351 bits
Score difference with first non-orthologous sequence - C.reinhardtii:351 P.pallidum:351

A8JAE8              	100.00%		D3BV36              	100.00%
A8J9E5              	26.98%		D3B2K8              	12.99%
Bootstrap support for A8JAE8 as seed ortholog is 100%.
Bootstrap support for D3BV36 as seed ortholog is 100%.

Group of orthologs #388. Best score 351 bits
Score difference with first non-orthologous sequence - C.reinhardtii:351 P.pallidum:351

A8JB14              	100.00%		D3AY55              	100.00%
Bootstrap support for A8JB14 as seed ortholog is 100%.
Bootstrap support for D3AY55 as seed ortholog is 100%.

Group of orthologs #389. Best score 351 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.pallidum:351

A8JC04              	100.00%		D3BGD9              	100.00%
Bootstrap support for A8JC04 as seed ortholog is 99%.
Bootstrap support for D3BGD9 as seed ortholog is 100%.

Group of orthologs #390. Best score 350 bits
Score difference with first non-orthologous sequence - C.reinhardtii:350 P.pallidum:350

A8J5E0              	100.00%		D3B3A5              	100.00%
Bootstrap support for A8J5E0 as seed ortholog is 100%.
Bootstrap support for D3B3A5 as seed ortholog is 100%.

Group of orthologs #391. Best score 350 bits
Score difference with first non-orthologous sequence - C.reinhardtii:350 P.pallidum:176

A8JBB8              	100.00%		D3BVN2              	100.00%
Bootstrap support for A8JBB8 as seed ortholog is 100%.
Bootstrap support for D3BVN2 as seed ortholog is 99%.

Group of orthologs #392. Best score 349 bits
Score difference with first non-orthologous sequence - C.reinhardtii:349 P.pallidum:349

A8HME4              	100.00%		D3B6G8              	100.00%
Bootstrap support for A8HME4 as seed ortholog is 100%.
Bootstrap support for D3B6G8 as seed ortholog is 100%.

Group of orthologs #393. Best score 347 bits
Score difference with first non-orthologous sequence - C.reinhardtii:184 P.pallidum:347

A8JFJ2              	100.00%		D3AWU9              	100.00%
Bootstrap support for A8JFJ2 as seed ortholog is 99%.
Bootstrap support for D3AWU9 as seed ortholog is 100%.

Group of orthologs #394. Best score 347 bits
Score difference with first non-orthologous sequence - C.reinhardtii:347 P.pallidum:347

A8J7D9              	100.00%		D3BDY0              	100.00%
Bootstrap support for A8J7D9 as seed ortholog is 100%.
Bootstrap support for D3BDY0 as seed ortholog is 100%.

Group of orthologs #395. Best score 347 bits
Score difference with first non-orthologous sequence - C.reinhardtii:347 P.pallidum:19

A8J6J0              	100.00%		D3BHF8              	100.00%
Bootstrap support for A8J6J0 as seed ortholog is 100%.
Bootstrap support for D3BHF8 as seed ortholog is 64%.
Alternative seed ortholog is D3BRS8 (19 bits away from this cluster)

Group of orthologs #396. Best score 346 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 P.pallidum:171

A8IIN4              	100.00%		D3BAC1              	100.00%
Bootstrap support for A8IIN4 as seed ortholog is 100%.
Bootstrap support for D3BAC1 as seed ortholog is 99%.

Group of orthologs #397. Best score 346 bits
Score difference with first non-orthologous sequence - C.reinhardtii:275 P.pallidum:346

A8JD99              	100.00%		D3AZ74              	100.00%
Bootstrap support for A8JD99 as seed ortholog is 100%.
Bootstrap support for D3AZ74 as seed ortholog is 100%.

Group of orthologs #398. Best score 345 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 P.pallidum:220

A8J5F6              	100.00%		D3B9E0              	100.00%
Bootstrap support for A8J5F6 as seed ortholog is 99%.
Bootstrap support for D3B9E0 as seed ortholog is 100%.

Group of orthologs #399. Best score 345 bits
Score difference with first non-orthologous sequence - C.reinhardtii:345 P.pallidum:345

A8JHM2              	100.00%		D3BBM5              	100.00%
Bootstrap support for A8JHM2 as seed ortholog is 100%.
Bootstrap support for D3BBM5 as seed ortholog is 100%.

Group of orthologs #400. Best score 345 bits
Score difference with first non-orthologous sequence - C.reinhardtii:35 P.pallidum:345

Q42690              	100.00%		D3BKL2              	100.00%
Bootstrap support for Q42690 as seed ortholog is 86%.
Bootstrap support for D3BKL2 as seed ortholog is 100%.

Group of orthologs #401. Best score 344 bits
Score difference with first non-orthologous sequence - C.reinhardtii:344 P.pallidum:122

A8IYU6              	100.00%		D3B485              	100.00%
A8IYU5              	32.10%		
Bootstrap support for A8IYU6 as seed ortholog is 100%.
Bootstrap support for D3B485 as seed ortholog is 99%.

Group of orthologs #402. Best score 344 bits
Score difference with first non-orthologous sequence - C.reinhardtii:197 P.pallidum:230

A8HTR9              	100.00%		D3AXX6              	100.00%
Bootstrap support for A8HTR9 as seed ortholog is 100%.
Bootstrap support for D3AXX6 as seed ortholog is 100%.

Group of orthologs #403. Best score 343 bits
Score difference with first non-orthologous sequence - C.reinhardtii:343 P.pallidum:343

A8IH03              	100.00%		D3AY60              	100.00%
Bootstrap support for A8IH03 as seed ortholog is 100%.
Bootstrap support for D3AY60 as seed ortholog is 100%.

Group of orthologs #404. Best score 342 bits
Score difference with first non-orthologous sequence - C.reinhardtii:342 P.pallidum:342

A8JCM8              	100.00%		D3BQC3              	100.00%
Bootstrap support for A8JCM8 as seed ortholog is 100%.
Bootstrap support for D3BQC3 as seed ortholog is 100%.

Group of orthologs #405. Best score 341 bits
Score difference with first non-orthologous sequence - C.reinhardtii:341 P.pallidum:341

A8IC90              	100.00%		D3B0C3              	100.00%
Bootstrap support for A8IC90 as seed ortholog is 100%.
Bootstrap support for D3B0C3 as seed ortholog is 100%.

Group of orthologs #406. Best score 341 bits
Score difference with first non-orthologous sequence - C.reinhardtii:341 P.pallidum:341

A8HVA6              	100.00%		D3BBL0              	100.00%
Bootstrap support for A8HVA6 as seed ortholog is 100%.
Bootstrap support for D3BBL0 as seed ortholog is 100%.

Group of orthologs #407. Best score 341 bits
Score difference with first non-orthologous sequence - C.reinhardtii:341 P.pallidum:341

A8JIP6              	100.00%		D3B3B2              	100.00%
Bootstrap support for A8JIP6 as seed ortholog is 100%.
Bootstrap support for D3B3B2 as seed ortholog is 100%.

Group of orthologs #408. Best score 340 bits
Score difference with first non-orthologous sequence - C.reinhardtii:340 P.pallidum:340

A8IN76              	100.00%		D3BS65              	100.00%
Bootstrap support for A8IN76 as seed ortholog is 100%.
Bootstrap support for D3BS65 as seed ortholog is 100%.

Group of orthologs #409. Best score 339 bits
Score difference with first non-orthologous sequence - C.reinhardtii:274 P.pallidum:279

A8HVM5              	100.00%		D3B4M1              	100.00%
Bootstrap support for A8HVM5 as seed ortholog is 100%.
Bootstrap support for D3B4M1 as seed ortholog is 100%.

Group of orthologs #410. Best score 339 bits
Score difference with first non-orthologous sequence - C.reinhardtii:339 P.pallidum:339

A8HUE0              	100.00%		D3BKY4              	100.00%
Bootstrap support for A8HUE0 as seed ortholog is 100%.
Bootstrap support for D3BKY4 as seed ortholog is 100%.

Group of orthologs #411. Best score 339 bits
Score difference with first non-orthologous sequence - C.reinhardtii:339 P.pallidum:339

A8J326              	100.00%		D3B601              	100.00%
Bootstrap support for A8J326 as seed ortholog is 100%.
Bootstrap support for D3B601 as seed ortholog is 100%.

Group of orthologs #412. Best score 339 bits
Score difference with first non-orthologous sequence - C.reinhardtii:339 P.pallidum:230

A8J4I7              	100.00%		D3B4Z6              	100.00%
Bootstrap support for A8J4I7 as seed ortholog is 100%.
Bootstrap support for D3B4Z6 as seed ortholog is 100%.

Group of orthologs #413. Best score 339 bits
Score difference with first non-orthologous sequence - C.reinhardtii:339 P.pallidum:339

A8J633              	100.00%		D3BII4              	100.00%
Bootstrap support for A8J633 as seed ortholog is 100%.
Bootstrap support for D3BII4 as seed ortholog is 100%.

Group of orthologs #414. Best score 337 bits
Score difference with first non-orthologous sequence - C.reinhardtii:337 P.pallidum:337

A8IYT7              	100.00%		D3AZG6              	100.00%
Bootstrap support for A8IYT7 as seed ortholog is 100%.
Bootstrap support for D3AZG6 as seed ortholog is 100%.

Group of orthologs #415. Best score 337 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.pallidum:71

A8IQC5              	100.00%		D3BUD0              	100.00%
Bootstrap support for A8IQC5 as seed ortholog is 99%.
Bootstrap support for D3BUD0 as seed ortholog is 92%.

Group of orthologs #416. Best score 336 bits
Score difference with first non-orthologous sequence - C.reinhardtii:336 P.pallidum:336

A8I8V6              	100.00%		D3B501              	100.00%
Bootstrap support for A8I8V6 as seed ortholog is 100%.
Bootstrap support for D3B501 as seed ortholog is 100%.

Group of orthologs #417. Best score 335 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.pallidum:21

A8JGD2              	100.00%		D3BKA7              	100.00%
                    	       		D3BQB9              	5.20%
Bootstrap support for A8JGD2 as seed ortholog is 95%.
Bootstrap support for D3BKA7 as seed ortholog is 31%.
Alternative seed ortholog is D3BIU0 (21 bits away from this cluster)

Group of orthologs #418. Best score 335 bits
Score difference with first non-orthologous sequence - C.reinhardtii:283 P.pallidum:241

A8HPU4              	100.00%		D3AVM8              	100.00%
Bootstrap support for A8HPU4 as seed ortholog is 100%.
Bootstrap support for D3AVM8 as seed ortholog is 99%.

Group of orthologs #419. Best score 335 bits
Score difference with first non-orthologous sequence - C.reinhardtii:335 P.pallidum:335

A8HWK6              	100.00%		D3B3M9              	100.00%
Bootstrap support for A8HWK6 as seed ortholog is 100%.
Bootstrap support for D3B3M9 as seed ortholog is 100%.

Group of orthologs #420. Best score 335 bits
Score difference with first non-orthologous sequence - C.reinhardtii:335 P.pallidum:335

A8IDI5              	100.00%		D3AXK7              	100.00%
Bootstrap support for A8IDI5 as seed ortholog is 100%.
Bootstrap support for D3AXK7 as seed ortholog is 100%.

Group of orthologs #421. Best score 334 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.pallidum:334

A8HS43              	100.00%		D3AZ82              	100.00%
Bootstrap support for A8HS43 as seed ortholog is 96%.
Bootstrap support for D3AZ82 as seed ortholog is 100%.

Group of orthologs #422. Best score 333 bits
Score difference with first non-orthologous sequence - C.reinhardtii:333 P.pallidum:333

A8HQI6              	100.00%		D3BM08              	100.00%
Bootstrap support for A8HQI6 as seed ortholog is 100%.
Bootstrap support for D3BM08 as seed ortholog is 100%.

Group of orthologs #423. Best score 332 bits
Score difference with first non-orthologous sequence - C.reinhardtii:332 P.pallidum:146

A8IS13              	100.00%		D3BNE7              	100.00%
A8HSX7              	47.36%		
Bootstrap support for A8IS13 as seed ortholog is 100%.
Bootstrap support for D3BNE7 as seed ortholog is 100%.

Group of orthologs #424. Best score 332 bits
Score difference with first non-orthologous sequence - C.reinhardtii:332 P.pallidum:332

A8HUK6              	100.00%		D3AZU3              	100.00%
Bootstrap support for A8HUK6 as seed ortholog is 100%.
Bootstrap support for D3AZU3 as seed ortholog is 100%.

Group of orthologs #425. Best score 332 bits
Score difference with first non-orthologous sequence - C.reinhardtii:23 P.pallidum:332

A8I9B8              	100.00%		D3B6K7              	100.00%
Bootstrap support for A8I9B8 as seed ortholog is 70%.
Alternative seed ortholog is A8HNV3 (23 bits away from this cluster)
Bootstrap support for D3B6K7 as seed ortholog is 100%.

Group of orthologs #426. Best score 332 bits
Score difference with first non-orthologous sequence - C.reinhardtii:332 P.pallidum:332

A8J4X1              	100.00%		D3B0D6              	100.00%
Bootstrap support for A8J4X1 as seed ortholog is 100%.
Bootstrap support for D3B0D6 as seed ortholog is 100%.

Group of orthologs #427. Best score 332 bits
Score difference with first non-orthologous sequence - C.reinhardtii:332 P.pallidum:332

A8IEL8              	100.00%		D3BRV9              	100.00%
Bootstrap support for A8IEL8 as seed ortholog is 100%.
Bootstrap support for D3BRV9 as seed ortholog is 100%.

Group of orthologs #428. Best score 332 bits
Score difference with first non-orthologous sequence - C.reinhardtii:332 P.pallidum:332

A8JHS9              	100.00%		D3BHS9              	100.00%
Bootstrap support for A8JHS9 as seed ortholog is 100%.
Bootstrap support for D3BHS9 as seed ortholog is 100%.

Group of orthologs #429. Best score 331 bits
Score difference with first non-orthologous sequence - C.reinhardtii:331 P.pallidum:331

A8IDH5              	100.00%		D3AVU8              	100.00%
Bootstrap support for A8IDH5 as seed ortholog is 100%.
Bootstrap support for D3AVU8 as seed ortholog is 100%.

Group of orthologs #430. Best score 331 bits
Score difference with first non-orthologous sequence - C.reinhardtii:331 P.pallidum:331

A8HN48              	100.00%		D3B668              	100.00%
Bootstrap support for A8HN48 as seed ortholog is 100%.
Bootstrap support for D3B668 as seed ortholog is 100%.

Group of orthologs #431. Best score 331 bits
Score difference with first non-orthologous sequence - C.reinhardtii:331 P.pallidum:331

A8JB76              	100.00%		D3BP67              	100.00%
Bootstrap support for A8JB76 as seed ortholog is 100%.
Bootstrap support for D3BP67 as seed ortholog is 100%.

Group of orthologs #432. Best score 330 bits
Score difference with first non-orthologous sequence - C.reinhardtii:5 P.pallidum:330

A8HNQ7              	100.00%		D3BQ30              	100.00%
Bootstrap support for A8HNQ7 as seed ortholog is 55%.
Alternative seed ortholog is A8JFV6 (5 bits away from this cluster)
Bootstrap support for D3BQ30 as seed ortholog is 100%.

Group of orthologs #433. Best score 329 bits
Score difference with first non-orthologous sequence - C.reinhardtii:13 P.pallidum:160

A8HSA2              	100.00%		D3BBH9              	100.00%
A8IUV9              	33.43%		
A8JFV7              	28.78%		
Q8RUT6              	17.59%		
A8J1H0              	9.16%		
Bootstrap support for A8HSA2 as seed ortholog is 64%.
Alternative seed ortholog is Q6QBS6 (13 bits away from this cluster)
Bootstrap support for D3BBH9 as seed ortholog is 99%.

Group of orthologs #434. Best score 326 bits
Score difference with first non-orthologous sequence - C.reinhardtii:264 P.pallidum:326

A8J3I4              	100.00%		D3AWA6              	100.00%
Bootstrap support for A8J3I4 as seed ortholog is 100%.
Bootstrap support for D3AWA6 as seed ortholog is 100%.

Group of orthologs #435. Best score 326 bits
Score difference with first non-orthologous sequence - C.reinhardtii:326 P.pallidum:326

A8IE29              	100.00%		D3BCX8              	100.00%
Bootstrap support for A8IE29 as seed ortholog is 100%.
Bootstrap support for D3BCX8 as seed ortholog is 100%.

Group of orthologs #436. Best score 326 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 P.pallidum:98

A8HX38              	100.00%		D3BP51              	100.00%
Bootstrap support for A8HX38 as seed ortholog is 98%.
Bootstrap support for D3BP51 as seed ortholog is 98%.

Group of orthologs #437. Best score 326 bits
Score difference with first non-orthologous sequence - C.reinhardtii:326 P.pallidum:326

A8J1S8              	100.00%		D3BJB3              	100.00%
Bootstrap support for A8J1S8 as seed ortholog is 100%.
Bootstrap support for D3BJB3 as seed ortholog is 100%.

Group of orthologs #438. Best score 325 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.pallidum:325

A8J8H3              	100.00%		D3B110              	100.00%
Bootstrap support for A8J8H3 as seed ortholog is 85%.
Bootstrap support for D3B110 as seed ortholog is 100%.

Group of orthologs #439. Best score 324 bits
Score difference with first non-orthologous sequence - C.reinhardtii:324 P.pallidum:324

A8JBM0              	100.00%		D3BSQ8              	100.00%
A8HTT3              	30.04%		
Bootstrap support for A8JBM0 as seed ortholog is 100%.
Bootstrap support for D3BSQ8 as seed ortholog is 100%.

Group of orthologs #440. Best score 324 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 P.pallidum:324

A8IKQ0              	100.00%		D3AXN0              	100.00%
Bootstrap support for A8IKQ0 as seed ortholog is 100%.
Bootstrap support for D3AXN0 as seed ortholog is 100%.

Group of orthologs #441. Best score 324 bits
Score difference with first non-orthologous sequence - C.reinhardtii:324 P.pallidum:324

A8JHC1              	100.00%		D3BIF4              	100.00%
Bootstrap support for A8JHC1 as seed ortholog is 100%.
Bootstrap support for D3BIF4 as seed ortholog is 100%.

Group of orthologs #442. Best score 323 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.pallidum:84

A7LGV1              	100.00%		D3B313              	100.00%
A8JFG3              	28.63%		
Bootstrap support for A7LGV1 as seed ortholog is 98%.
Bootstrap support for D3B313 as seed ortholog is 95%.

Group of orthologs #443. Best score 323 bits
Score difference with first non-orthologous sequence - C.reinhardtii:323 P.pallidum:241

A8IVS6              	100.00%		D3B2F1              	100.00%
Bootstrap support for A8IVS6 as seed ortholog is 100%.
Bootstrap support for D3B2F1 as seed ortholog is 100%.

Group of orthologs #444. Best score 322 bits
Score difference with first non-orthologous sequence - C.reinhardtii:322 P.pallidum:322

A8HQ67              	100.00%		D3BAB9              	100.00%
Bootstrap support for A8HQ67 as seed ortholog is 100%.
Bootstrap support for D3BAB9 as seed ortholog is 100%.

Group of orthologs #445. Best score 322 bits
Score difference with first non-orthologous sequence - C.reinhardtii:234 P.pallidum:268

A8JFH6              	100.00%		D3BBE5              	100.00%
Bootstrap support for A8JFH6 as seed ortholog is 100%.
Bootstrap support for D3BBE5 as seed ortholog is 100%.

Group of orthologs #446. Best score 321 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.pallidum:321

A8IG50              	100.00%		D3BKN6              	100.00%
Bootstrap support for A8IG50 as seed ortholog is 96%.
Bootstrap support for D3BKN6 as seed ortholog is 100%.

Group of orthologs #447. Best score 320 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 P.pallidum:320

A8JF53              	100.00%		D3BGE3              	100.00%
Bootstrap support for A8JF53 as seed ortholog is 100%.
Bootstrap support for D3BGE3 as seed ortholog is 100%.

Group of orthologs #448. Best score 319 bits
Score difference with first non-orthologous sequence - C.reinhardtii:319 P.pallidum:319

A8IKA1              	100.00%		D3BQ29              	100.00%
Bootstrap support for A8IKA1 as seed ortholog is 100%.
Bootstrap support for D3BQ29 as seed ortholog is 100%.

Group of orthologs #449. Best score 319 bits
Score difference with first non-orthologous sequence - C.reinhardtii:319 P.pallidum:319

A8J3U8              	100.00%		D3BK44              	100.00%
Bootstrap support for A8J3U8 as seed ortholog is 100%.
Bootstrap support for D3BK44 as seed ortholog is 100%.

Group of orthologs #450. Best score 318 bits
Score difference with first non-orthologous sequence - C.reinhardtii:262 P.pallidum:202

A8I670              	100.00%		D3B236              	100.00%
Bootstrap support for A8I670 as seed ortholog is 100%.
Bootstrap support for D3B236 as seed ortholog is 100%.

Group of orthologs #451. Best score 318 bits
Score difference with first non-orthologous sequence - C.reinhardtii:318 P.pallidum:318

A8J6K9              	100.00%		D3BBN6              	100.00%
Bootstrap support for A8J6K9 as seed ortholog is 100%.
Bootstrap support for D3BBN6 as seed ortholog is 100%.

Group of orthologs #452. Best score 318 bits
Score difference with first non-orthologous sequence - C.reinhardtii:318 P.pallidum:318

A8JEW4              	100.00%		D3B770              	100.00%
Bootstrap support for A8JEW4 as seed ortholog is 100%.
Bootstrap support for D3B770 as seed ortholog is 100%.

Group of orthologs #453. Best score 318 bits
Score difference with first non-orthologous sequence - C.reinhardtii:318 P.pallidum:318

A8J8V5              	100.00%		D3BQZ8              	100.00%
Bootstrap support for A8J8V5 as seed ortholog is 100%.
Bootstrap support for D3BQZ8 as seed ortholog is 100%.

Group of orthologs #454. Best score 317 bits
Score difference with first non-orthologous sequence - C.reinhardtii:317 P.pallidum:317

A8J149              	100.00%		D3AX31              	100.00%
Bootstrap support for A8J149 as seed ortholog is 100%.
Bootstrap support for D3AX31 as seed ortholog is 100%.

Group of orthologs #455. Best score 317 bits
Score difference with first non-orthologous sequence - C.reinhardtii:317 P.pallidum:317

A8JAY5              	100.00%		D3BT29              	100.00%
Bootstrap support for A8JAY5 as seed ortholog is 100%.
Bootstrap support for D3BT29 as seed ortholog is 100%.

Group of orthologs #456. Best score 316 bits
Score difference with first non-orthologous sequence - C.reinhardtii:217 P.pallidum:250

A8J7E8              	100.00%		D3B1Q6              	100.00%
A8JA94              	46.37%		
Bootstrap support for A8J7E8 as seed ortholog is 100%.
Bootstrap support for D3B1Q6 as seed ortholog is 100%.

Group of orthologs #457. Best score 316 bits
Score difference with first non-orthologous sequence - C.reinhardtii:316 P.pallidum:316

A8J5Q2              	100.00%		D3BPD5              	100.00%
A8J9F0              	51.79%		
Bootstrap support for A8J5Q2 as seed ortholog is 100%.
Bootstrap support for D3BPD5 as seed ortholog is 100%.

Group of orthologs #458. Best score 316 bits
Score difference with first non-orthologous sequence - C.reinhardtii:222 P.pallidum:316

A8I9S6              	100.00%		D3B725              	100.00%
Bootstrap support for A8I9S6 as seed ortholog is 100%.
Bootstrap support for D3B725 as seed ortholog is 100%.

Group of orthologs #459. Best score 316 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 P.pallidum:78

A8J240              	100.00%		D3B5M6              	100.00%
Bootstrap support for A8J240 as seed ortholog is 99%.
Bootstrap support for D3B5M6 as seed ortholog is 93%.

Group of orthologs #460. Best score 316 bits
Score difference with first non-orthologous sequence - C.reinhardtii:316 P.pallidum:316

A8J7N7              	100.00%		D3B3A9              	100.00%
Bootstrap support for A8J7N7 as seed ortholog is 100%.
Bootstrap support for D3B3A9 as seed ortholog is 100%.

Group of orthologs #461. Best score 316 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.pallidum:255

A8JH65              	100.00%		D3B6A7              	100.00%
Bootstrap support for A8JH65 as seed ortholog is 98%.
Bootstrap support for D3B6A7 as seed ortholog is 100%.

Group of orthologs #462. Best score 316 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 P.pallidum:22

A8JHQ7              	100.00%		D3BP55              	100.00%
Bootstrap support for A8JHQ7 as seed ortholog is 100%.
Bootstrap support for D3BP55 as seed ortholog is 84%.

Group of orthologs #463. Best score 315 bits
Score difference with first non-orthologous sequence - C.reinhardtii:38 P.pallidum:26

A8IVZ2              	100.00%		D3B158              	100.00%
A8IHK0              	66.49%		
Bootstrap support for A8IVZ2 as seed ortholog is 76%.
Bootstrap support for D3B158 as seed ortholog is 76%.

Group of orthologs #464. Best score 314 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.pallidum:84

A8IL29              	100.00%		D3B3T9              	100.00%
Bootstrap support for A8IL29 as seed ortholog is 100%.
Bootstrap support for D3B3T9 as seed ortholog is 99%.

Group of orthologs #465. Best score 314 bits
Score difference with first non-orthologous sequence - C.reinhardtii:314 P.pallidum:314

A8J977              	100.00%		D3B961              	100.00%
Bootstrap support for A8J977 as seed ortholog is 100%.
Bootstrap support for D3B961 as seed ortholog is 100%.

Group of orthologs #466. Best score 314 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.pallidum:191

A8IYJ4              	100.00%		D3BL25              	100.00%
Bootstrap support for A8IYJ4 as seed ortholog is 95%.
Bootstrap support for D3BL25 as seed ortholog is 99%.

Group of orthologs #467. Best score 313 bits
Score difference with first non-orthologous sequence - C.reinhardtii:313 P.pallidum:235

A8HYK4              	100.00%		D3BM07              	100.00%
Bootstrap support for A8HYK4 as seed ortholog is 100%.
Bootstrap support for D3BM07 as seed ortholog is 100%.

Group of orthologs #468. Best score 313 bits
Score difference with first non-orthologous sequence - C.reinhardtii:313 P.pallidum:313

A8J5P4              	100.00%		D3BEM7              	100.00%
Bootstrap support for A8J5P4 as seed ortholog is 100%.
Bootstrap support for D3BEM7 as seed ortholog is 100%.

Group of orthologs #469. Best score 311 bits
Score difference with first non-orthologous sequence - C.reinhardtii:311 P.pallidum:311

A8HRF8              	100.00%		D3BGC0              	100.00%
Bootstrap support for A8HRF8 as seed ortholog is 100%.
Bootstrap support for D3BGC0 as seed ortholog is 100%.

Group of orthologs #470. Best score 311 bits
Score difference with first non-orthologous sequence - C.reinhardtii:311 P.pallidum:311

A8JEP4              	100.00%		D3AWK3              	100.00%
Bootstrap support for A8JEP4 as seed ortholog is 100%.
Bootstrap support for D3AWK3 as seed ortholog is 100%.

Group of orthologs #471. Best score 311 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 P.pallidum:84

A8JB47              	100.00%		D3BFM3              	100.00%
Bootstrap support for A8JB47 as seed ortholog is 88%.
Bootstrap support for D3BFM3 as seed ortholog is 99%.

Group of orthologs #472. Best score 310 bits
Score difference with first non-orthologous sequence - C.reinhardtii:310 P.pallidum:310

Q84JV7              	100.00%		D3BEU0              	100.00%
Bootstrap support for Q84JV7 as seed ortholog is 100%.
Bootstrap support for D3BEU0 as seed ortholog is 100%.

Group of orthologs #473. Best score 309 bits
Score difference with first non-orthologous sequence - C.reinhardtii:309 P.pallidum:309

A8HP55              	100.00%		D3BER0              	100.00%
Bootstrap support for A8HP55 as seed ortholog is 100%.
Bootstrap support for D3BER0 as seed ortholog is 100%.

Group of orthologs #474. Best score 309 bits
Score difference with first non-orthologous sequence - C.reinhardtii:309 P.pallidum:92

A8ISC5              	100.00%		D3B4K1              	100.00%
Bootstrap support for A8ISC5 as seed ortholog is 100%.
Bootstrap support for D3B4K1 as seed ortholog is 97%.

Group of orthologs #475. Best score 309 bits
Score difference with first non-orthologous sequence - C.reinhardtii:309 P.pallidum:309

A8HZX4              	100.00%		D3BJV5              	100.00%
Bootstrap support for A8HZX4 as seed ortholog is 100%.
Bootstrap support for D3BJV5 as seed ortholog is 100%.

Group of orthologs #476. Best score 309 bits
Score difference with first non-orthologous sequence - C.reinhardtii:309 P.pallidum:309

A8JAW4              	100.00%		D3B264              	100.00%
Bootstrap support for A8JAW4 as seed ortholog is 100%.
Bootstrap support for D3B264 as seed ortholog is 100%.

Group of orthologs #477. Best score 308 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 P.pallidum:308

A8J0W9              	100.00%		D3B7L8              	100.00%
                    	       		D3BQC7              	9.35%
                    	       		D3BR71              	8.78%
Bootstrap support for A8J0W9 as seed ortholog is 93%.
Bootstrap support for D3B7L8 as seed ortholog is 100%.

Group of orthologs #478. Best score 308 bits
Score difference with first non-orthologous sequence - C.reinhardtii:308 P.pallidum:308

A8J9V0              	100.00%		D3BV94              	100.00%
                    	       		D3BVB3              	34.21%
                    	       		D3BVB6              	25.19%
Bootstrap support for A8J9V0 as seed ortholog is 100%.
Bootstrap support for D3BV94 as seed ortholog is 100%.

Group of orthologs #479. Best score 308 bits
Score difference with first non-orthologous sequence - C.reinhardtii:308 P.pallidum:308

A8IIM2              	100.00%		D3BJN3              	100.00%
Bootstrap support for A8IIM2 as seed ortholog is 100%.
Bootstrap support for D3BJN3 as seed ortholog is 100%.

Group of orthologs #480. Best score 307 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 P.pallidum:106

A8HYY4              	100.00%		D3B4M8              	100.00%
Bootstrap support for A8HYY4 as seed ortholog is 93%.
Bootstrap support for D3B4M8 as seed ortholog is 99%.

Group of orthologs #481. Best score 307 bits
Score difference with first non-orthologous sequence - C.reinhardtii:208 P.pallidum:307

A8ICB3              	100.00%		D3B0N9              	100.00%
Bootstrap support for A8ICB3 as seed ortholog is 100%.
Bootstrap support for D3B0N9 as seed ortholog is 100%.

Group of orthologs #482. Best score 307 bits
Score difference with first non-orthologous sequence - C.reinhardtii:307 P.pallidum:307

A8HXN9              	100.00%		D3B8H0              	100.00%
Bootstrap support for A8HXN9 as seed ortholog is 100%.
Bootstrap support for D3B8H0 as seed ortholog is 100%.

Group of orthologs #483. Best score 307 bits
Score difference with first non-orthologous sequence - C.reinhardtii:307 P.pallidum:307

A8HR57              	100.00%		D3BCF9              	100.00%
Bootstrap support for A8HR57 as seed ortholog is 100%.
Bootstrap support for D3BCF9 as seed ortholog is 100%.

Group of orthologs #484. Best score 307 bits
Score difference with first non-orthologous sequence - C.reinhardtii:7 P.pallidum:233

A8JAN0              	100.00%		D3AXT3              	100.00%
Bootstrap support for A8JAN0 as seed ortholog is 54%.
Alternative seed ortholog is A8JGT0 (7 bits away from this cluster)
Bootstrap support for D3AXT3 as seed ortholog is 100%.

Group of orthologs #485. Best score 307 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 P.pallidum:307

A8IK69              	100.00%		D3BLP1              	100.00%
Bootstrap support for A8IK69 as seed ortholog is 100%.
Bootstrap support for D3BLP1 as seed ortholog is 100%.

Group of orthologs #486. Best score 306 bits
Score difference with first non-orthologous sequence - C.reinhardtii:306 P.pallidum:306

A8IWM5              	100.00%		D3B2K3              	100.00%
Bootstrap support for A8IWM5 as seed ortholog is 100%.
Bootstrap support for D3B2K3 as seed ortholog is 100%.

Group of orthologs #487. Best score 306 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.pallidum:89

A8J9T9              	100.00%		D3AYN1              	100.00%
Bootstrap support for A8J9T9 as seed ortholog is 96%.
Bootstrap support for D3AYN1 as seed ortholog is 99%.

Group of orthologs #488. Best score 306 bits
Score difference with first non-orthologous sequence - C.reinhardtii:222 P.pallidum:306

A8IBJ5              	100.00%		D3BRX2              	100.00%
Bootstrap support for A8IBJ5 as seed ortholog is 100%.
Bootstrap support for D3BRX2 as seed ortholog is 100%.

Group of orthologs #489. Best score 306 bits
Score difference with first non-orthologous sequence - C.reinhardtii:306 P.pallidum:306

A8J8T5              	100.00%		D3BK06              	100.00%
Bootstrap support for A8J8T5 as seed ortholog is 100%.
Bootstrap support for D3BK06 as seed ortholog is 100%.

Group of orthologs #490. Best score 305 bits
Score difference with first non-orthologous sequence - C.reinhardtii:177 P.pallidum:152

A8HX21              	100.00%		D3B846              	100.00%
                    	       		D3BNT8              	5.37%
Bootstrap support for A8HX21 as seed ortholog is 99%.
Bootstrap support for D3B846 as seed ortholog is 97%.

Group of orthologs #491. Best score 304 bits
Score difference with first non-orthologous sequence - C.reinhardtii:304 P.pallidum:304

A8IN95              	100.00%		D3BHC9              	100.00%
Bootstrap support for A8IN95 as seed ortholog is 100%.
Bootstrap support for D3BHC9 as seed ortholog is 100%.

Group of orthologs #492. Best score 304 bits
Score difference with first non-orthologous sequence - C.reinhardtii:304 P.pallidum:304

A8J9B2              	100.00%		D3BNE3              	100.00%
Bootstrap support for A8J9B2 as seed ortholog is 100%.
Bootstrap support for D3BNE3 as seed ortholog is 100%.

Group of orthologs #493. Best score 303 bits
Score difference with first non-orthologous sequence - C.reinhardtii:303 P.pallidum:303

A8IP78              	100.00%		D3BLC2              	100.00%
Bootstrap support for A8IP78 as seed ortholog is 100%.
Bootstrap support for D3BLC2 as seed ortholog is 100%.

Group of orthologs #494. Best score 303 bits
Score difference with first non-orthologous sequence - C.reinhardtii:303 P.pallidum:303

A8JAA6              	100.00%		D3B7T3              	100.00%
Bootstrap support for A8JAA6 as seed ortholog is 100%.
Bootstrap support for D3B7T3 as seed ortholog is 100%.

Group of orthologs #495. Best score 302 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 P.pallidum:217

A8IL73              	100.00%		D3B5N8              	100.00%
Bootstrap support for A8IL73 as seed ortholog is 100%.
Bootstrap support for D3B5N8 as seed ortholog is 100%.

Group of orthologs #496. Best score 302 bits
Score difference with first non-orthologous sequence - C.reinhardtii:302 P.pallidum:75

A8J387              	100.00%		D3B8P9              	100.00%
Bootstrap support for A8J387 as seed ortholog is 100%.
Bootstrap support for D3B8P9 as seed ortholog is 95%.

Group of orthologs #497. Best score 301 bits
Score difference with first non-orthologous sequence - C.reinhardtii:301 P.pallidum:301

A8HMB2              	100.00%		D3BA44              	100.00%
Bootstrap support for A8HMB2 as seed ortholog is 100%.
Bootstrap support for D3BA44 as seed ortholog is 100%.

Group of orthologs #498. Best score 301 bits
Score difference with first non-orthologous sequence - C.reinhardtii:301 P.pallidum:301

A8ID63              	100.00%		D3BSE8              	100.00%
Bootstrap support for A8ID63 as seed ortholog is 100%.
Bootstrap support for D3BSE8 as seed ortholog is 100%.

Group of orthologs #499. Best score 300 bits
Score difference with first non-orthologous sequence - C.reinhardtii:300 P.pallidum:90

A8IA67              	100.00%		D3B851              	100.00%
Bootstrap support for A8IA67 as seed ortholog is 100%.
Bootstrap support for D3B851 as seed ortholog is 97%.

Group of orthologs #500. Best score 299 bits
Score difference with first non-orthologous sequence - C.reinhardtii:251 P.pallidum:299

A8JFD5              	100.00%		D3B573              	100.00%
Bootstrap support for A8JFD5 as seed ortholog is 100%.
Bootstrap support for D3B573 as seed ortholog is 100%.

Group of orthologs #501. Best score 298 bits
Score difference with first non-orthologous sequence - C.reinhardtii:298 P.pallidum:127

A8J8Y2              	100.00%		D3BPP7              	100.00%
Bootstrap support for A8J8Y2 as seed ortholog is 100%.
Bootstrap support for D3BPP7 as seed ortholog is 99%.

Group of orthologs #502. Best score 297 bits
Score difference with first non-orthologous sequence - C.reinhardtii:208 P.pallidum:297

A8ITP6              	100.00%		D3BHB8              	100.00%
Bootstrap support for A8ITP6 as seed ortholog is 100%.
Bootstrap support for D3BHB8 as seed ortholog is 100%.

Group of orthologs #503. Best score 297 bits
Score difference with first non-orthologous sequence - C.reinhardtii:297 P.pallidum:184

A8IIK8              	100.00%		D3BQN8              	100.00%
Bootstrap support for A8IIK8 as seed ortholog is 100%.
Bootstrap support for D3BQN8 as seed ortholog is 100%.

Group of orthologs #504. Best score 296 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 P.pallidum:296

A8JGC8              	100.00%		D3BKV2              	100.00%
                    	       		D3BRK9              	5.66%
                    	       		D3B2D3              	5.27%
Bootstrap support for A8JGC8 as seed ortholog is 99%.
Bootstrap support for D3BKV2 as seed ortholog is 100%.

Group of orthologs #505. Best score 296 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.pallidum:178

A8IS24              	100.00%		D3AZ84              	100.00%
Bootstrap support for A8IS24 as seed ortholog is 96%.
Bootstrap support for D3AZ84 as seed ortholog is 100%.

Group of orthologs #506. Best score 295 bits
Score difference with first non-orthologous sequence - C.reinhardtii:295 P.pallidum:134

A8IGP7              	100.00%		D3BCE4              	100.00%
A8JID7              	5.05%		
Bootstrap support for A8IGP7 as seed ortholog is 100%.
Bootstrap support for D3BCE4 as seed ortholog is 99%.

Group of orthologs #507. Best score 295 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.pallidum:295

A8HR39              	100.00%		D3BV27              	100.00%
Bootstrap support for A8HR39 as seed ortholog is 91%.
Bootstrap support for D3BV27 as seed ortholog is 100%.

Group of orthologs #508. Best score 295 bits
Score difference with first non-orthologous sequence - C.reinhardtii:167 P.pallidum:295

A8JGX0              	100.00%		D3BHT0              	100.00%
Bootstrap support for A8JGX0 as seed ortholog is 100%.
Bootstrap support for D3BHT0 as seed ortholog is 100%.

Group of orthologs #509. Best score 294 bits
Score difference with first non-orthologous sequence - C.reinhardtii:294 P.pallidum:294

A8JGW6              	100.00%		D3BSV5              	100.00%
Bootstrap support for A8JGW6 as seed ortholog is 100%.
Bootstrap support for D3BSV5 as seed ortholog is 100%.

Group of orthologs #510. Best score 294 bits
Score difference with first non-orthologous sequence - C.reinhardtii:294 P.pallidum:294

A8JFA4              	100.00%		D3BV85              	100.00%
Bootstrap support for A8JFA4 as seed ortholog is 100%.
Bootstrap support for D3BV85 as seed ortholog is 100%.

Group of orthologs #511. Best score 293 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 P.pallidum:293

A8HNC2              	100.00%		D3BGN9              	100.00%
                    	       		D3AW08              	37.64%
                    	       		D3B435              	20.55%
Bootstrap support for A8HNC2 as seed ortholog is 100%.
Bootstrap support for D3BGN9 as seed ortholog is 100%.

Group of orthologs #512. Best score 293 bits
Score difference with first non-orthologous sequence - C.reinhardtii:293 P.pallidum:293

A8JDK4              	100.00%		D3BAS1              	100.00%
A8JGS6              	15.40%		
Bootstrap support for A8JDK4 as seed ortholog is 100%.
Bootstrap support for D3BAS1 as seed ortholog is 100%.

Group of orthologs #513. Best score 293 bits
Score difference with first non-orthologous sequence - C.reinhardtii:293 P.pallidum:293

A8I2D8              	100.00%		D3BKA5              	100.00%
Bootstrap support for A8I2D8 as seed ortholog is 100%.
Bootstrap support for D3BKA5 as seed ortholog is 100%.

Group of orthologs #514. Best score 292 bits
Score difference with first non-orthologous sequence - C.reinhardtii:292 P.pallidum:66

A8IVD4              	100.00%		D3BF32              	100.00%
A8J7L6              	30.86%		D3BS76              	11.92%
                    	       		D3BS79              	11.11%
Bootstrap support for A8IVD4 as seed ortholog is 100%.
Bootstrap support for D3BF32 as seed ortholog is 95%.

Group of orthologs #515. Best score 292 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.pallidum:248

A8ISE5              	100.00%		D3BSZ9              	100.00%
                    	       		D3BUR8              	6.80%
                    	       		D3BI30              	5.52%
                    	       		D3BJ76              	5.52%
Bootstrap support for A8ISE5 as seed ortholog is 99%.
Bootstrap support for D3BSZ9 as seed ortholog is 100%.

Group of orthologs #516. Best score 292 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 P.pallidum:52

A8J195              	100.00%		D3BGU2              	100.00%
Bootstrap support for A8J195 as seed ortholog is 99%.
Bootstrap support for D3BGU2 as seed ortholog is 94%.

Group of orthologs #517. Best score 291 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.pallidum:63

A8IZJ9              	100.00%		D3BAT3              	100.00%
Bootstrap support for A8IZJ9 as seed ortholog is 86%.
Bootstrap support for D3BAT3 as seed ortholog is 96%.

Group of orthologs #518. Best score 291 bits
Score difference with first non-orthologous sequence - C.reinhardtii:291 P.pallidum:291

A8IAX2              	100.00%		D3BU83              	100.00%
Bootstrap support for A8IAX2 as seed ortholog is 100%.
Bootstrap support for D3BU83 as seed ortholog is 100%.

Group of orthologs #519. Best score 290 bits
Score difference with first non-orthologous sequence - C.reinhardtii:290 P.pallidum:290

A8J2W1              	100.00%		D3BJZ6              	100.00%
Bootstrap support for A8J2W1 as seed ortholog is 100%.
Bootstrap support for D3BJZ6 as seed ortholog is 100%.

Group of orthologs #520. Best score 290 bits
Score difference with first non-orthologous sequence - C.reinhardtii:290 P.pallidum:290

A8IZE7              	100.00%		D3BT14              	100.00%
Bootstrap support for A8IZE7 as seed ortholog is 100%.
Bootstrap support for D3BT14 as seed ortholog is 100%.

Group of orthologs #521. Best score 290 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.pallidum:95

A8JD64              	100.00%		D3BQE6              	100.00%
Bootstrap support for A8JD64 as seed ortholog is 99%.
Bootstrap support for D3BQE6 as seed ortholog is 99%.

Group of orthologs #522. Best score 290 bits
Score difference with first non-orthologous sequence - C.reinhardtii:290 P.pallidum:290

A8JGS3              	100.00%		D3BQU0              	100.00%
Bootstrap support for A8JGS3 as seed ortholog is 100%.
Bootstrap support for D3BQU0 as seed ortholog is 100%.

Group of orthologs #523. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.pallidum:289

A8JH71              	100.00%		D3BKS0              	100.00%
                    	       		D3BBX1              	30.61%
                    	       		D3B7Q9              	17.01%
                    	       		D3B6P3              	7.37%
                    	       		D3B3M5              	5.90%
Bootstrap support for A8JH71 as seed ortholog is 98%.
Bootstrap support for D3BKS0 as seed ortholog is 100%.

Group of orthologs #524. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:236 P.pallidum:188

A8J9Q3              	100.00%		D3B2L6              	100.00%
Bootstrap support for A8J9Q3 as seed ortholog is 100%.
Bootstrap support for D3B2L6 as seed ortholog is 100%.

Group of orthologs #525. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:289 P.pallidum:68

A8JDY3              	100.00%		D3BF27              	100.00%
Bootstrap support for A8JDY3 as seed ortholog is 100%.
Bootstrap support for D3BF27 as seed ortholog is 89%.

Group of orthologs #526. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:289 P.pallidum:289

A8J2J9              	100.00%		D3BQE1              	100.00%
Bootstrap support for A8J2J9 as seed ortholog is 100%.
Bootstrap support for D3BQE1 as seed ortholog is 100%.

Group of orthologs #527. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:289 P.pallidum:289

Q84UB2              	100.00%		D3BSA3              	100.00%
Bootstrap support for Q84UB2 as seed ortholog is 100%.
Bootstrap support for D3BSA3 as seed ortholog is 100%.

Group of orthologs #528. Best score 287 bits
Score difference with first non-orthologous sequence - C.reinhardtii:287 P.pallidum:287

A8IRY0              	100.00%		D3BGA0              	100.00%
                    	       		D3BG99              	54.85%
                    	       		D3BB40              	37.82%
Bootstrap support for A8IRY0 as seed ortholog is 100%.
Bootstrap support for D3BGA0 as seed ortholog is 100%.

Group of orthologs #529. Best score 287 bits
Score difference with first non-orthologous sequence - C.reinhardtii:287 P.pallidum:287

A8ILL5              	100.00%		D3AZF5              	100.00%
Bootstrap support for A8ILL5 as seed ortholog is 100%.
Bootstrap support for D3AZF5 as seed ortholog is 100%.

Group of orthologs #530. Best score 285 bits
Score difference with first non-orthologous sequence - C.reinhardtii:285 P.pallidum:285

A8HNF4              	100.00%		D3AY53              	100.00%
Bootstrap support for A8HNF4 as seed ortholog is 100%.
Bootstrap support for D3AY53 as seed ortholog is 100%.

Group of orthologs #531. Best score 285 bits
Score difference with first non-orthologous sequence - C.reinhardtii:285 P.pallidum:285

A8HXG8              	100.00%		D3BV59              	100.00%
Bootstrap support for A8HXG8 as seed ortholog is 100%.
Bootstrap support for D3BV59 as seed ortholog is 100%.

Group of orthologs #532. Best score 285 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 P.pallidum:104

A8ILX2              	100.00%		D3BUX2              	100.00%
Bootstrap support for A8ILX2 as seed ortholog is 100%.
Bootstrap support for D3BUX2 as seed ortholog is 99%.

Group of orthologs #533. Best score 285 bits
Score difference with first non-orthologous sequence - C.reinhardtii:285 P.pallidum:285

A8IVE2              	100.00%		D3BVG5              	100.00%
Bootstrap support for A8IVE2 as seed ortholog is 100%.
Bootstrap support for D3BVG5 as seed ortholog is 100%.

Group of orthologs #534. Best score 284 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 P.pallidum:284

A8J6L8              	100.00%		D3B5L4              	100.00%
Bootstrap support for A8J6L8 as seed ortholog is 99%.
Bootstrap support for D3B5L4 as seed ortholog is 100%.

Group of orthologs #535. Best score 283 bits
Score difference with first non-orthologous sequence - C.reinhardtii:283 P.pallidum:283

A8HYL2              	100.00%		D3B3W9              	100.00%
Bootstrap support for A8HYL2 as seed ortholog is 100%.
Bootstrap support for D3B3W9 as seed ortholog is 100%.

Group of orthologs #536. Best score 283 bits
Score difference with first non-orthologous sequence - C.reinhardtii:283 P.pallidum:283

A8JHX0              	100.00%		D3BSY5              	100.00%
Bootstrap support for A8JHX0 as seed ortholog is 100%.
Bootstrap support for D3BSY5 as seed ortholog is 100%.

Group of orthologs #537. Best score 282 bits
Score difference with first non-orthologous sequence - C.reinhardtii:282 P.pallidum:282

A8IES0              	100.00%		D3B2C9              	100.00%
A8IES3              	100.00%		D3BM64              	100.00%
                    	       		D3B2C8              	42.98%
                    	       		D3BTI2              	7.81%
Bootstrap support for A8IES0 as seed ortholog is 100%.
Bootstrap support for A8IES3 as seed ortholog is 100%.
Bootstrap support for D3B2C9 as seed ortholog is 100%.
Bootstrap support for D3BM64 as seed ortholog is 100%.

Group of orthologs #538. Best score 282 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 P.pallidum:282

A8I1A7              	100.00%		D3B6G7              	100.00%
Bootstrap support for A8I1A7 as seed ortholog is 100%.
Bootstrap support for D3B6G7 as seed ortholog is 100%.

Group of orthologs #539. Best score 282 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.pallidum:101

A8HTN0              	100.00%		D3BIR2              	100.00%
Bootstrap support for A8HTN0 as seed ortholog is 95%.
Bootstrap support for D3BIR2 as seed ortholog is 99%.

Group of orthologs #540. Best score 282 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 P.pallidum:282

A8HQP0              	100.00%		D3BL83              	100.00%
Bootstrap support for A8HQP0 as seed ortholog is 100%.
Bootstrap support for D3BL83 as seed ortholog is 100%.

Group of orthologs #541. Best score 281 bits
Score difference with first non-orthologous sequence - C.reinhardtii:281 P.pallidum:281

A8HW25              	100.00%		D3BC30              	100.00%
                    	       		D3BC44              	39.38%
                    	       		D3BC42              	28.48%
                    	       		D3BM70              	28.48%
                    	       		D3B495              	23.92%
                    	       		D3BH17              	21.72%
                    	       		D3BQT6              	14.65%
                    	       		D3AVL1              	5.13%
Bootstrap support for A8HW25 as seed ortholog is 100%.
Bootstrap support for D3BC30 as seed ortholog is 100%.

Group of orthologs #542. Best score 280 bits
Score difference with first non-orthologous sequence - C.reinhardtii:280 P.pallidum:152

A8I3T3              	100.00%		D3B5R2              	100.00%
                    	       		D3B4A8              	27.92%
Bootstrap support for A8I3T3 as seed ortholog is 100%.
Bootstrap support for D3B5R2 as seed ortholog is 100%.

Group of orthologs #543. Best score 280 bits
Score difference with first non-orthologous sequence - C.reinhardtii:280 P.pallidum:280

A8HPG2              	100.00%		D3B6E5              	100.00%
Bootstrap support for A8HPG2 as seed ortholog is 100%.
Bootstrap support for D3B6E5 as seed ortholog is 100%.

Group of orthologs #544. Best score 280 bits
Score difference with first non-orthologous sequence - C.reinhardtii:280 P.pallidum:280

A8IRL9              	100.00%		D3B5U9              	100.00%
Bootstrap support for A8IRL9 as seed ortholog is 100%.
Bootstrap support for D3B5U9 as seed ortholog is 100%.

Group of orthologs #545. Best score 280 bits
Score difference with first non-orthologous sequence - C.reinhardtii:280 P.pallidum:280

A8ISG1              	100.00%		D3BP76              	100.00%
Bootstrap support for A8ISG1 as seed ortholog is 100%.
Bootstrap support for D3BP76 as seed ortholog is 100%.

Group of orthologs #546. Best score 279 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 P.pallidum:279

A8IXB8              	100.00%		D3B3Z0              	100.00%
Bootstrap support for A8IXB8 as seed ortholog is 99%.
Bootstrap support for D3B3Z0 as seed ortholog is 100%.

Group of orthologs #547. Best score 279 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 P.pallidum:279

A8J6P3              	100.00%		D3B9R2              	100.00%
Bootstrap support for A8J6P3 as seed ortholog is 99%.
Bootstrap support for D3B9R2 as seed ortholog is 100%.

Group of orthologs #548. Best score 279 bits
Score difference with first non-orthologous sequence - C.reinhardtii:279 P.pallidum:279

A8IQD6              	100.00%		D3BTE8              	100.00%
Bootstrap support for A8IQD6 as seed ortholog is 100%.
Bootstrap support for D3BTE8 as seed ortholog is 100%.

Group of orthologs #549. Best score 278 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 P.pallidum:181

A8IRX5              	100.00%		D3B7P1              	100.00%
                    	       		D3BSF4              	9.88%
Bootstrap support for A8IRX5 as seed ortholog is 100%.
Bootstrap support for D3B7P1 as seed ortholog is 100%.

Group of orthologs #550. Best score 278 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.pallidum:278

A8IKV5              	100.00%		D3BB15              	100.00%
                    	       		D3BIM9              	25.88%
Bootstrap support for A8IKV5 as seed ortholog is 93%.
Bootstrap support for D3BB15 as seed ortholog is 100%.

Group of orthologs #551. Best score 278 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 P.pallidum:278

A8IR24              	100.00%		D3AWL4              	100.00%
Bootstrap support for A8IR24 as seed ortholog is 97%.
Bootstrap support for D3AWL4 as seed ortholog is 100%.

Group of orthologs #552. Best score 278 bits
Score difference with first non-orthologous sequence - C.reinhardtii:278 P.pallidum:278

A8ITQ5              	100.00%		D3B8S5              	100.00%
Bootstrap support for A8ITQ5 as seed ortholog is 100%.
Bootstrap support for D3B8S5 as seed ortholog is 100%.

Group of orthologs #553. Best score 278 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 P.pallidum:278

A8IWQ2              	100.00%		D3BTH5              	100.00%
Bootstrap support for A8IWQ2 as seed ortholog is 99%.
Bootstrap support for D3BTH5 as seed ortholog is 100%.

Group of orthologs #554. Best score 277 bits
Score difference with first non-orthologous sequence - C.reinhardtii:277 P.pallidum:277

A8HS48              	100.00%		D3BEH6              	100.00%
Bootstrap support for A8HS48 as seed ortholog is 100%.
Bootstrap support for D3BEH6 as seed ortholog is 100%.

Group of orthologs #555. Best score 277 bits
Score difference with first non-orthologous sequence - C.reinhardtii:277 P.pallidum:277

A8J2C4              	100.00%		D3B806              	100.00%
Bootstrap support for A8J2C4 as seed ortholog is 100%.
Bootstrap support for D3B806 as seed ortholog is 100%.

Group of orthologs #556. Best score 277 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 P.pallidum:45

Q6IV67              	100.00%		D3B2B1              	100.00%
Bootstrap support for Q6IV67 as seed ortholog is 100%.
Bootstrap support for D3B2B1 as seed ortholog is 88%.

Group of orthologs #557. Best score 276 bits
Score difference with first non-orthologous sequence - C.reinhardtii:276 P.pallidum:276

A8IWA3              	100.00%		D3BLP5              	100.00%
                    	       		D3B996              	6.53%
Bootstrap support for A8IWA3 as seed ortholog is 100%.
Bootstrap support for D3BLP5 as seed ortholog is 100%.

Group of orthologs #558. Best score 276 bits
Score difference with first non-orthologous sequence - C.reinhardtii:276 P.pallidum:276

A8ICL5              	100.00%		D3AVI8              	100.00%
Bootstrap support for A8ICL5 as seed ortholog is 100%.
Bootstrap support for D3AVI8 as seed ortholog is 100%.

Group of orthologs #559. Best score 276 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.pallidum:157

A8JB50              	100.00%		D3B9A5              	100.00%
Bootstrap support for A8JB50 as seed ortholog is 91%.
Bootstrap support for D3B9A5 as seed ortholog is 99%.

Group of orthologs #560. Best score 275 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 P.pallidum:171

A8I9B0              	100.00%		D3AYY9              	100.00%
Bootstrap support for A8I9B0 as seed ortholog is 100%.
Bootstrap support for D3AYY9 as seed ortholog is 100%.

Group of orthologs #561. Best score 275 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 P.pallidum:275

A8HXL0              	100.00%		D3B9G4              	100.00%
Bootstrap support for A8HXL0 as seed ortholog is 100%.
Bootstrap support for D3B9G4 as seed ortholog is 100%.

Group of orthologs #562. Best score 275 bits
Score difference with first non-orthologous sequence - C.reinhardtii:275 P.pallidum:216

A8IT87              	100.00%		D3AYY7              	100.00%
Bootstrap support for A8IT87 as seed ortholog is 100%.
Bootstrap support for D3AYY7 as seed ortholog is 100%.

Group of orthologs #563. Best score 275 bits
Score difference with first non-orthologous sequence - C.reinhardtii:275 P.pallidum:275

A8I629              	100.00%		D3BU50              	100.00%
Bootstrap support for A8I629 as seed ortholog is 100%.
Bootstrap support for D3BU50 as seed ortholog is 100%.

Group of orthologs #564. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:274 P.pallidum:274

A8HP17              	100.00%		D3B2Q1              	100.00%
Bootstrap support for A8HP17 as seed ortholog is 100%.
Bootstrap support for D3B2Q1 as seed ortholog is 100%.

Group of orthologs #565. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 P.pallidum:154

A8J435              	100.00%		D3AWT6              	100.00%
Bootstrap support for A8J435 as seed ortholog is 99%.
Bootstrap support for D3AWT6 as seed ortholog is 99%.

Group of orthologs #566. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 P.pallidum:274

A8JD76              	100.00%		D3B6L9              	100.00%
Bootstrap support for A8JD76 as seed ortholog is 74%.
Alternative seed ortholog is A8JBM1 (163 bits away from this cluster)
Bootstrap support for D3B6L9 as seed ortholog is 100%.

Group of orthologs #567. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:274 P.pallidum:274

A8J7Y2              	100.00%		D3BLV1              	100.00%
Bootstrap support for A8J7Y2 as seed ortholog is 100%.
Bootstrap support for D3BLV1 as seed ortholog is 100%.

Group of orthologs #568. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:274 P.pallidum:274

A8JHY6              	100.00%		D3BNL4              	100.00%
Bootstrap support for A8JHY6 as seed ortholog is 100%.
Bootstrap support for D3BNL4 as seed ortholog is 100%.

Group of orthologs #569. Best score 273 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 P.pallidum:79

A8J282              	100.00%		D3AYC5              	100.00%
Bootstrap support for A8J282 as seed ortholog is 98%.
Bootstrap support for D3AYC5 as seed ortholog is 99%.

Group of orthologs #570. Best score 273 bits
Score difference with first non-orthologous sequence - C.reinhardtii:273 P.pallidum:273

A8IRE2              	100.00%		D3BIA4              	100.00%
Bootstrap support for A8IRE2 as seed ortholog is 100%.
Bootstrap support for D3BIA4 as seed ortholog is 100%.

Group of orthologs #571. Best score 273 bits
Score difference with first non-orthologous sequence - C.reinhardtii:273 P.pallidum:180

A8JA68              	100.00%		D3B4F5              	100.00%
Bootstrap support for A8JA68 as seed ortholog is 100%.
Bootstrap support for D3B4F5 as seed ortholog is 100%.

Group of orthologs #572. Best score 273 bits
Score difference with first non-orthologous sequence - C.reinhardtii:273 P.pallidum:273

A8IZK3              	100.00%		D3BLP0              	100.00%
Bootstrap support for A8IZK3 as seed ortholog is 100%.
Bootstrap support for D3BLP0 as seed ortholog is 100%.

Group of orthologs #573. Best score 273 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 P.pallidum:184

A8IZG4              	100.00%		D3BTD3              	100.00%
Bootstrap support for A8IZG4 as seed ortholog is 99%.
Bootstrap support for D3BTD3 as seed ortholog is 100%.

Group of orthologs #574. Best score 272 bits
Score difference with first non-orthologous sequence - C.reinhardtii:272 P.pallidum:272

A8HTE5              	100.00%		D3B8W3              	100.00%
Bootstrap support for A8HTE5 as seed ortholog is 100%.
Bootstrap support for D3B8W3 as seed ortholog is 100%.

Group of orthologs #575. Best score 272 bits
Score difference with first non-orthologous sequence - C.reinhardtii:272 P.pallidum:272

A8HYQ9              	100.00%		D3BJ52              	100.00%
Bootstrap support for A8HYQ9 as seed ortholog is 100%.
Bootstrap support for D3BJ52 as seed ortholog is 100%.

Group of orthologs #576. Best score 272 bits
Score difference with first non-orthologous sequence - C.reinhardtii:272 P.pallidum:272

A8IMP6              	100.00%		D3BCZ8              	100.00%
Bootstrap support for A8IMP6 as seed ortholog is 100%.
Bootstrap support for D3BCZ8 as seed ortholog is 100%.

Group of orthologs #577. Best score 272 bits
Score difference with first non-orthologous sequence - C.reinhardtii:272 P.pallidum:272

A8J8C1              	100.00%		D3BGF6              	100.00%
Bootstrap support for A8J8C1 as seed ortholog is 100%.
Bootstrap support for D3BGF6 as seed ortholog is 100%.

Group of orthologs #578. Best score 270 bits
Score difference with first non-orthologous sequence - C.reinhardtii:270 P.pallidum:270

A8JET1              	100.00%		D3BA94              	100.00%
Bootstrap support for A8JET1 as seed ortholog is 100%.
Bootstrap support for D3BA94 as seed ortholog is 100%.

Group of orthologs #579. Best score 270 bits
Score difference with first non-orthologous sequence - C.reinhardtii:270 P.pallidum:270

A8J308              	100.00%		D3BR16              	100.00%
Bootstrap support for A8J308 as seed ortholog is 100%.
Bootstrap support for D3BR16 as seed ortholog is 100%.

Group of orthologs #580. Best score 269 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.pallidum:143

A8JEC6              	100.00%		D3BCI5              	100.00%
Bootstrap support for A8JEC6 as seed ortholog is 91%.
Bootstrap support for D3BCI5 as seed ortholog is 99%.

Group of orthologs #581. Best score 268 bits
Score difference with first non-orthologous sequence - C.reinhardtii:268 P.pallidum:268

Q6V9B1              	100.00%		D3BDT2              	100.00%
Bootstrap support for Q6V9B1 as seed ortholog is 100%.
Bootstrap support for D3BDT2 as seed ortholog is 100%.

Group of orthologs #582. Best score 268 bits
Score difference with first non-orthologous sequence - C.reinhardtii:268 P.pallidum:268

A8JHH1              	100.00%		D3BTL6              	100.00%
Bootstrap support for A8JHH1 as seed ortholog is 100%.
Bootstrap support for D3BTL6 as seed ortholog is 100%.

Group of orthologs #583. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:267 P.pallidum:267

A8HX04              	100.00%		D3B0H6              	100.00%
Bootstrap support for A8HX04 as seed ortholog is 100%.
Bootstrap support for D3B0H6 as seed ortholog is 100%.

Group of orthologs #584. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:267 P.pallidum:129

A8IDM5              	100.00%		D3BBN9              	100.00%
Bootstrap support for A8IDM5 as seed ortholog is 100%.
Bootstrap support for D3BBN9 as seed ortholog is 99%.

Group of orthologs #585. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:267 P.pallidum:267

A8J0V5              	100.00%		D3BHV4              	100.00%
Bootstrap support for A8J0V5 as seed ortholog is 100%.
Bootstrap support for D3BHV4 as seed ortholog is 100%.

Group of orthologs #586. Best score 266 bits
Score difference with first non-orthologous sequence - C.reinhardtii:266 P.pallidum:266

A8HWJ2              	100.00%		D3B1R6              	100.00%
Bootstrap support for A8HWJ2 as seed ortholog is 100%.
Bootstrap support for D3B1R6 as seed ortholog is 100%.

Group of orthologs #587. Best score 266 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 P.pallidum:266

A8J2Y5              	100.00%		D3B8K6              	100.00%
Bootstrap support for A8J2Y5 as seed ortholog is 100%.
Bootstrap support for D3B8K6 as seed ortholog is 100%.

Group of orthologs #588. Best score 266 bits
Score difference with first non-orthologous sequence - C.reinhardtii:266 P.pallidum:266

A8IF80              	100.00%		D3BMD5              	100.00%
Bootstrap support for A8IF80 as seed ortholog is 100%.
Bootstrap support for D3BMD5 as seed ortholog is 100%.

Group of orthologs #589. Best score 265 bits
Score difference with first non-orthologous sequence - C.reinhardtii:265 P.pallidum:265

A8JGD1              	100.00%		D3B061              	100.00%
Q7XXT3              	23.47%		
Bootstrap support for A8JGD1 as seed ortholog is 100%.
Bootstrap support for D3B061 as seed ortholog is 100%.

Group of orthologs #590. Best score 265 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.pallidum:28

A8IRT2              	100.00%		D3B0H3              	100.00%
Bootstrap support for A8IRT2 as seed ortholog is 100%.
Bootstrap support for D3B0H3 as seed ortholog is 83%.

Group of orthologs #591. Best score 265 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.pallidum:161

A8J1B6              	100.00%		D3B2T1              	100.00%
Bootstrap support for A8J1B6 as seed ortholog is 99%.
Bootstrap support for D3B2T1 as seed ortholog is 99%.

Group of orthologs #592. Best score 265 bits
Score difference with first non-orthologous sequence - C.reinhardtii:265 P.pallidum:265

A8IIM0              	100.00%		D3BUW3              	100.00%
Bootstrap support for A8IIM0 as seed ortholog is 100%.
Bootstrap support for D3BUW3 as seed ortholog is 100%.

Group of orthologs #593. Best score 265 bits
Score difference with first non-orthologous sequence - C.reinhardtii:265 P.pallidum:265

A8IWB0              	100.00%		D3BTW3              	100.00%
Bootstrap support for A8IWB0 as seed ortholog is 100%.
Bootstrap support for D3BTW3 as seed ortholog is 100%.

Group of orthologs #594. Best score 265 bits
Score difference with first non-orthologous sequence - C.reinhardtii:265 P.pallidum:84

A8J1D2              	100.00%		D3BSL5              	100.00%
Bootstrap support for A8J1D2 as seed ortholog is 100%.
Bootstrap support for D3BSL5 as seed ortholog is 95%.

Group of orthologs #595. Best score 265 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 P.pallidum:136

A8J980              	100.00%		D3BTY6              	100.00%
Bootstrap support for A8J980 as seed ortholog is 100%.
Bootstrap support for D3BTY6 as seed ortholog is 99%.

Group of orthologs #596. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:264 P.pallidum:264

A8J0U1              	100.00%		D3BBH0              	100.00%
A8J0U0              	97.44%		
A8J0U2              	69.77%		
A8J0U4              	68.75%		
A8J993              	67.83%		
A8J399              	25.82%		
A8ILT7              	24.69%		
A8JH07              	19.77%		
Q8LP67              	19.77%		
A8ILI7              	8.91%		
Bootstrap support for A8J0U1 as seed ortholog is 100%.
Bootstrap support for D3BBH0 as seed ortholog is 100%.

Group of orthologs #597. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:264 P.pallidum:264

A8I4N9              	100.00%		D3B5S9              	100.00%
Bootstrap support for A8I4N9 as seed ortholog is 100%.
Bootstrap support for D3B5S9 as seed ortholog is 100%.

Group of orthologs #598. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:264 P.pallidum:264

A8I2J9              	100.00%		D3BBM4              	100.00%
Bootstrap support for A8I2J9 as seed ortholog is 100%.
Bootstrap support for D3BBM4 as seed ortholog is 100%.

Group of orthologs #599. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.pallidum:108

A8IDP6              	100.00%		D3BBP5              	100.00%
Bootstrap support for A8IDP6 as seed ortholog is 100%.
Bootstrap support for D3BBP5 as seed ortholog is 100%.

Group of orthologs #600. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:264 P.pallidum:264

A8J0I7              	100.00%		D3B4H2              	100.00%
Bootstrap support for A8J0I7 as seed ortholog is 100%.
Bootstrap support for D3B4H2 as seed ortholog is 100%.

Group of orthologs #601. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.pallidum:264

A8JDN9              	100.00%		D3B280              	100.00%
Bootstrap support for A8JDN9 as seed ortholog is 99%.
Bootstrap support for D3B280 as seed ortholog is 100%.

Group of orthologs #602. Best score 263 bits
Score difference with first non-orthologous sequence - C.reinhardtii:263 P.pallidum:263

Q5S7Y5              	100.00%		D3B782              	100.00%
                    	       		D3AX99              	52.05%
Bootstrap support for Q5S7Y5 as seed ortholog is 100%.
Bootstrap support for D3B782 as seed ortholog is 100%.

Group of orthologs #603. Best score 263 bits
Score difference with first non-orthologous sequence - C.reinhardtii:263 P.pallidum:263

A8IZH0              	100.00%		D3B0K1              	100.00%
Bootstrap support for A8IZH0 as seed ortholog is 100%.
Bootstrap support for D3B0K1 as seed ortholog is 100%.

Group of orthologs #604. Best score 263 bits
Score difference with first non-orthologous sequence - C.reinhardtii:263 P.pallidum:263

A8J2I5              	100.00%		D3AYQ3              	100.00%
Bootstrap support for A8J2I5 as seed ortholog is 100%.
Bootstrap support for D3AYQ3 as seed ortholog is 100%.

Group of orthologs #605. Best score 263 bits
Score difference with first non-orthologous sequence - C.reinhardtii:34 P.pallidum:263

A8J574              	100.00%		D3BR02              	100.00%
Bootstrap support for A8J574 as seed ortholog is 77%.
Bootstrap support for D3BR02 as seed ortholog is 100%.

Group of orthologs #606. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.pallidum:50

A8I6J1              	100.00%		D3BAM1              	100.00%
                    	       		D3BM92              	10.43%
Bootstrap support for A8I6J1 as seed ortholog is 99%.
Bootstrap support for D3BAM1 as seed ortholog is 94%.

Group of orthologs #607. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:262 P.pallidum:262

Q94CJ2              	100.00%		D3AXZ6              	100.00%
Q8RUE9              	65.65%		
Bootstrap support for Q94CJ2 as seed ortholog is 100%.
Bootstrap support for D3AXZ6 as seed ortholog is 100%.

Group of orthologs #608. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.pallidum:157

A8HPX8              	100.00%		D3B9K7              	100.00%
Bootstrap support for A8HPX8 as seed ortholog is 65%.
Alternative seed ortholog is A8IS61 (76 bits away from this cluster)
Bootstrap support for D3B9K7 as seed ortholog is 100%.

Group of orthologs #609. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.pallidum:262

A8HXA6              	100.00%		D3BD10              	100.00%
Bootstrap support for A8HXA6 as seed ortholog is 92%.
Bootstrap support for D3BD10 as seed ortholog is 100%.

Group of orthologs #610. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:262 P.pallidum:262

A8I8J2              	100.00%		D3B972              	100.00%
Bootstrap support for A8I8J2 as seed ortholog is 100%.
Bootstrap support for D3B972 as seed ortholog is 100%.

Group of orthologs #611. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:262 P.pallidum:262

Q6V9B0              	100.00%		D3BQU8              	100.00%
Bootstrap support for Q6V9B0 as seed ortholog is 100%.
Bootstrap support for D3BQU8 as seed ortholog is 100%.

Group of orthologs #612. Best score 261 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 P.pallidum:169

A8IR43              	100.00%		D3AW79              	100.00%
Bootstrap support for A8IR43 as seed ortholog is 99%.
Bootstrap support for D3AW79 as seed ortholog is 100%.

Group of orthologs #613. Best score 261 bits
Score difference with first non-orthologous sequence - C.reinhardtii:261 P.pallidum:261

A8J1E8              	100.00%		D3AXW6              	100.00%
Bootstrap support for A8J1E8 as seed ortholog is 100%.
Bootstrap support for D3AXW6 as seed ortholog is 100%.

Group of orthologs #614. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:260 P.pallidum:260

A8IQ02              	100.00%		D3AXN2              	100.00%
Bootstrap support for A8IQ02 as seed ortholog is 100%.
Bootstrap support for D3AXN2 as seed ortholog is 100%.

Group of orthologs #615. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:260 P.pallidum:260

A8IAG6              	100.00%		D3B4U3              	100.00%
Bootstrap support for A8IAG6 as seed ortholog is 100%.
Bootstrap support for D3B4U3 as seed ortholog is 100%.

Group of orthologs #616. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:260 P.pallidum:260

A8JGK5              	100.00%		D3AVQ5              	100.00%
Bootstrap support for A8JGK5 as seed ortholog is 100%.
Bootstrap support for D3AVQ5 as seed ortholog is 100%.

Group of orthologs #617. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.pallidum:95

A8JBJ3              	100.00%		D3BGI7              	100.00%
Bootstrap support for A8JBJ3 as seed ortholog is 99%.
Bootstrap support for D3BGI7 as seed ortholog is 100%.

Group of orthologs #618. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.pallidum:20

A8JBH0              	100.00%		D3BL30              	100.00%
Bootstrap support for A8JBH0 as seed ortholog is 94%.
Bootstrap support for D3BL30 as seed ortholog is 70%.
Alternative seed ortholog is D3BVI8 (20 bits away from this cluster)

Group of orthologs #619. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.pallidum:40

A8JHI5              	100.00%		D3BL86              	100.00%
Bootstrap support for A8JHI5 as seed ortholog is 100%.
Bootstrap support for D3BL86 as seed ortholog is 98%.

Group of orthologs #620. Best score 259 bits
Score difference with first non-orthologous sequence - C.reinhardtii:259 P.pallidum:47

A8J7T7              	100.00%		D3BJ60              	100.00%
A8I5R9              	9.68%		D3AXL6              	27.89%
                    	       		D3BB03              	18.29%
                    	       		D3BL12              	17.12%
                    	       		D3BUN6              	16.86%
                    	       		D3BKJ7              	13.62%
                    	       		D3BB13              	11.80%
Bootstrap support for A8J7T7 as seed ortholog is 100%.
Bootstrap support for D3BJ60 as seed ortholog is 88%.

Group of orthologs #621. Best score 259 bits
Score difference with first non-orthologous sequence - C.reinhardtii:259 P.pallidum:259

A8HYG6              	100.00%		D3BSQ9              	100.00%
Bootstrap support for A8HYG6 as seed ortholog is 100%.
Bootstrap support for D3BSQ9 as seed ortholog is 100%.

Group of orthologs #622. Best score 259 bits
Score difference with first non-orthologous sequence - C.reinhardtii:259 P.pallidum:259

A8IR74              	100.00%		D3BK79              	100.00%
Bootstrap support for A8IR74 as seed ortholog is 100%.
Bootstrap support for D3BK79 as seed ortholog is 100%.

Group of orthologs #623. Best score 258 bits
Score difference with first non-orthologous sequence - C.reinhardtii:258 P.pallidum:258

A8IN82              	100.00%		D3B512              	100.00%
Bootstrap support for A8IN82 as seed ortholog is 100%.
Bootstrap support for D3B512 as seed ortholog is 100%.

Group of orthologs #624. Best score 258 bits
Score difference with first non-orthologous sequence - C.reinhardtii:258 P.pallidum:258

A8I4P5              	100.00%		D3BBF0              	100.00%
Bootstrap support for A8I4P5 as seed ortholog is 100%.
Bootstrap support for D3BBF0 as seed ortholog is 100%.

Group of orthologs #625. Best score 258 bits
Score difference with first non-orthologous sequence - C.reinhardtii:258 P.pallidum:258

A8IT96              	100.00%		D3B9R3              	100.00%
Bootstrap support for A8IT96 as seed ortholog is 100%.
Bootstrap support for D3B9R3 as seed ortholog is 100%.

Group of orthologs #626. Best score 258 bits
Score difference with first non-orthologous sequence - C.reinhardtii:258 P.pallidum:258

A8I2G3              	100.00%		D3BJY4              	100.00%
Bootstrap support for A8I2G3 as seed ortholog is 100%.
Bootstrap support for D3BJY4 as seed ortholog is 100%.

Group of orthologs #627. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:257 P.pallidum:182

A8IL68              	100.00%		D3B9T8              	100.00%
Bootstrap support for A8IL68 as seed ortholog is 100%.
Bootstrap support for D3B9T8 as seed ortholog is 99%.

Group of orthologs #628. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:8 P.pallidum:257

A8J2F9              	100.00%		D3B5G2              	100.00%
Bootstrap support for A8J2F9 as seed ortholog is 44%.
Alternative seed ortholog is A8J3C4 (8 bits away from this cluster)
Bootstrap support for D3B5G2 as seed ortholog is 100%.

Group of orthologs #629. Best score 256 bits
Score difference with first non-orthologous sequence - C.reinhardtii:256 P.pallidum:256

A8HR70              	100.00%		D3AWD3              	100.00%
Bootstrap support for A8HR70 as seed ortholog is 100%.
Bootstrap support for D3AWD3 as seed ortholog is 100%.

Group of orthologs #630. Best score 255 bits
Score difference with first non-orthologous sequence - C.reinhardtii:255 P.pallidum:255

A8IL96              	100.00%		D3B6W0              	100.00%
Bootstrap support for A8IL96 as seed ortholog is 100%.
Bootstrap support for D3B6W0 as seed ortholog is 100%.

Group of orthologs #631. Best score 255 bits
Score difference with first non-orthologous sequence - C.reinhardtii:255 P.pallidum:255

A8ICG4              	100.00%		D3BCA7              	100.00%
Bootstrap support for A8ICG4 as seed ortholog is 100%.
Bootstrap support for D3BCA7 as seed ortholog is 100%.

Group of orthologs #632. Best score 255 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 P.pallidum:255

A8J9D4              	100.00%		D3BEQ8              	100.00%
Bootstrap support for A8J9D4 as seed ortholog is 100%.
Bootstrap support for D3BEQ8 as seed ortholog is 100%.

Group of orthologs #633. Best score 255 bits
Score difference with first non-orthologous sequence - C.reinhardtii:255 P.pallidum:255

A8J0Z8              	100.00%		D3BRI8              	100.00%
Bootstrap support for A8J0Z8 as seed ortholog is 100%.
Bootstrap support for D3BRI8 as seed ortholog is 100%.

Group of orthologs #634. Best score 254 bits
Score difference with first non-orthologous sequence - C.reinhardtii:254 P.pallidum:254

A8J7F8              	100.00%		D3B6X6              	100.00%
Bootstrap support for A8J7F8 as seed ortholog is 100%.
Bootstrap support for D3B6X6 as seed ortholog is 100%.

Group of orthologs #635. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 P.pallidum:164

O48949              	100.00%		D3BPL3              	100.00%
                    	       		D3BP03              	50.12%
Bootstrap support for O48949 as seed ortholog is 100%.
Bootstrap support for D3BPL3 as seed ortholog is 99%.

Group of orthologs #636. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 P.pallidum:253

A8HPM0              	100.00%		D3BI96              	100.00%
Bootstrap support for A8HPM0 as seed ortholog is 100%.
Bootstrap support for D3BI96 as seed ortholog is 100%.

Group of orthologs #637. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 P.pallidum:253

A8IL60              	100.00%		D3BAF6              	100.00%
Bootstrap support for A8IL60 as seed ortholog is 100%.
Bootstrap support for D3BAF6 as seed ortholog is 100%.

Group of orthologs #638. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 P.pallidum:150

A8J8V7              	100.00%		D3AWZ0              	100.00%
Bootstrap support for A8J8V7 as seed ortholog is 100%.
Bootstrap support for D3AWZ0 as seed ortholog is 100%.

Group of orthologs #639. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 P.pallidum:169

A8INH7              	100.00%		D3BG93              	100.00%
Bootstrap support for A8INH7 as seed ortholog is 100%.
Bootstrap support for D3BG93 as seed ortholog is 100%.

Group of orthologs #640. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 P.pallidum:253

A8IZL5              	100.00%		D3BU70              	100.00%
Bootstrap support for A8IZL5 as seed ortholog is 100%.
Bootstrap support for D3BU70 as seed ortholog is 100%.

Group of orthologs #641. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.pallidum:17

A8JF17              	100.00%		D3BJ29              	100.00%
Bootstrap support for A8JF17 as seed ortholog is 100%.
Bootstrap support for D3BJ29 as seed ortholog is 89%.

Group of orthologs #642. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.pallidum:85

A8IVQ7              	100.00%		D3BGH1              	100.00%
Bootstrap support for A8IVQ7 as seed ortholog is 99%.
Bootstrap support for D3BGH1 as seed ortholog is 99%.

Group of orthologs #643. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 P.pallidum:252

A8IZ93              	100.00%		D3BTS5              	100.00%
Bootstrap support for A8IZ93 as seed ortholog is 100%.
Bootstrap support for D3BTS5 as seed ortholog is 100%.

Group of orthologs #644. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 P.pallidum:252

A8JH67              	100.00%		D3BHW4              	100.00%
Bootstrap support for A8JH67 as seed ortholog is 100%.
Bootstrap support for D3BHW4 as seed ortholog is 100%.

Group of orthologs #645. Best score 251 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.pallidum:94

A8IPJ0              	100.00%		D3B5I3              	100.00%
Bootstrap support for A8IPJ0 as seed ortholog is 98%.
Bootstrap support for D3B5I3 as seed ortholog is 99%.

Group of orthologs #646. Best score 251 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 P.pallidum:171

A8I2V3              	100.00%		D3BEP4              	100.00%
Bootstrap support for A8I2V3 as seed ortholog is 92%.
Bootstrap support for D3BEP4 as seed ortholog is 100%.

Group of orthologs #647. Best score 251 bits
Score difference with first non-orthologous sequence - C.reinhardtii:251 P.pallidum:251

A8J5Z0              	100.00%		D3AX76              	100.00%
Bootstrap support for A8J5Z0 as seed ortholog is 100%.
Bootstrap support for D3AX76 as seed ortholog is 100%.

Group of orthologs #648. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 P.pallidum:151

A8IZT2              	100.00%		D3AXU4              	100.00%
Bootstrap support for A8IZT2 as seed ortholog is 89%.
Bootstrap support for D3AXU4 as seed ortholog is 99%.

Group of orthologs #649. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.pallidum:44

A8J1Y2              	100.00%		D3BCD0              	100.00%
Bootstrap support for A8J1Y2 as seed ortholog is 98%.
Bootstrap support for D3BCD0 as seed ortholog is 80%.

Group of orthologs #650. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.pallidum:125

A8JFI8              	100.00%		D3B0N1              	100.00%
Bootstrap support for A8JFI8 as seed ortholog is 100%.
Bootstrap support for D3B0N1 as seed ortholog is 100%.

Group of orthologs #651. Best score 249 bits
Score difference with first non-orthologous sequence - C.reinhardtii:249 P.pallidum:249

A8IXF4              	100.00%		D3BE20              	100.00%
Bootstrap support for A8IXF4 as seed ortholog is 100%.
Bootstrap support for D3BE20 as seed ortholog is 100%.

Group of orthologs #652. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:248 P.pallidum:248

A8HQD7              	100.00%		D3BKZ8              	100.00%
Bootstrap support for A8HQD7 as seed ortholog is 100%.
Bootstrap support for D3BKZ8 as seed ortholog is 100%.

Group of orthologs #653. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.pallidum:142

A8J8S6              	100.00%		D3B0J9              	100.00%
Bootstrap support for A8J8S6 as seed ortholog is 99%.
Bootstrap support for D3B0J9 as seed ortholog is 99%.

Group of orthologs #654. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:248 P.pallidum:248

A8HYD8              	100.00%		D3BS99              	100.00%
Bootstrap support for A8HYD8 as seed ortholog is 100%.
Bootstrap support for D3BS99 as seed ortholog is 100%.

Group of orthologs #655. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:248 P.pallidum:248

A8IB25              	100.00%		D3BRK4              	100.00%
Bootstrap support for A8IB25 as seed ortholog is 100%.
Bootstrap support for D3BRK4 as seed ortholog is 100%.

Group of orthologs #656. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 P.pallidum:248

A8JEL2              	100.00%		D3BEM8              	100.00%
Bootstrap support for A8JEL2 as seed ortholog is 99%.
Bootstrap support for D3BEM8 as seed ortholog is 100%.

Group of orthologs #657. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:248 P.pallidum:248

A8JBD9              	100.00%		D3BT31              	100.00%
Bootstrap support for A8JBD9 as seed ortholog is 100%.
Bootstrap support for D3BT31 as seed ortholog is 100%.

Group of orthologs #658. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:247 P.pallidum:247

A8ITF3              	100.00%		D3AYB4              	100.00%
                    	       		D3AWU8              	20.27%
Bootstrap support for A8ITF3 as seed ortholog is 100%.
Bootstrap support for D3AYB4 as seed ortholog is 100%.

Group of orthologs #659. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:247 P.pallidum:247

A8HQD2              	100.00%		D3BAW8              	100.00%
Bootstrap support for A8HQD2 as seed ortholog is 100%.
Bootstrap support for D3BAW8 as seed ortholog is 100%.

Group of orthologs #660. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:247 P.pallidum:185

A8HY93              	100.00%		D3BJX9              	100.00%
Bootstrap support for A8HY93 as seed ortholog is 100%.
Bootstrap support for D3BJX9 as seed ortholog is 100%.

Group of orthologs #661. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:247 P.pallidum:247

A8J6N3              	100.00%		D3BB07              	100.00%
Bootstrap support for A8J6N3 as seed ortholog is 100%.
Bootstrap support for D3BB07 as seed ortholog is 100%.

Group of orthologs #662. Best score 246 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 P.pallidum:63

A8I7C5              	100.00%		D3BQF5              	100.00%
Bootstrap support for A8I7C5 as seed ortholog is 91%.
Bootstrap support for D3BQF5 as seed ortholog is 93%.

Group of orthologs #663. Best score 246 bits
Score difference with first non-orthologous sequence - C.reinhardtii:246 P.pallidum:246

A8J0Q5              	100.00%		D3BK02              	100.00%
Bootstrap support for A8J0Q5 as seed ortholog is 100%.
Bootstrap support for D3BK02 as seed ortholog is 100%.

Group of orthologs #664. Best score 245 bits
Score difference with first non-orthologous sequence - C.reinhardtii:245 P.pallidum:115

A8JCH8              	100.00%		D3B8S4              	100.00%
Bootstrap support for A8JCH8 as seed ortholog is 100%.
Bootstrap support for D3B8S4 as seed ortholog is 99%.

Group of orthologs #665. Best score 245 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 P.pallidum:104

A8JBM6              	100.00%		D3BAH5              	100.00%
Bootstrap support for A8JBM6 as seed ortholog is 99%.
Bootstrap support for D3BAH5 as seed ortholog is 99%.

Group of orthologs #666. Best score 244 bits
Score difference with first non-orthologous sequence - C.reinhardtii:244 P.pallidum:244

A8IGR4              	100.00%		D3B3Q6              	100.00%
Bootstrap support for A8IGR4 as seed ortholog is 100%.
Bootstrap support for D3B3Q6 as seed ortholog is 100%.

Group of orthologs #667. Best score 244 bits
Score difference with first non-orthologous sequence - C.reinhardtii:244 P.pallidum:132

A8JEP8              	100.00%		D3B8I8              	100.00%
Bootstrap support for A8JEP8 as seed ortholog is 100%.
Bootstrap support for D3B8I8 as seed ortholog is 99%.

Group of orthologs #668. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:243 P.pallidum:243

A8HVQ1              	100.00%		D3BK61              	100.00%
Bootstrap support for A8HVQ1 as seed ortholog is 100%.
Bootstrap support for D3BK61 as seed ortholog is 100%.

Group of orthologs #669. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:243 P.pallidum:243

A8I7W6              	100.00%		D3BNT3              	100.00%
Bootstrap support for A8I7W6 as seed ortholog is 100%.
Bootstrap support for D3BNT3 as seed ortholog is 100%.

Group of orthologs #670. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:243 P.pallidum:243

A8IVP3              	100.00%		D3BGU1              	100.00%
Bootstrap support for A8IVP3 as seed ortholog is 100%.
Bootstrap support for D3BGU1 as seed ortholog is 100%.

Group of orthologs #671. Best score 242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:242 P.pallidum:39

A8IZZ4              	100.00%		D3BFQ9              	100.00%
                    	       		D3B8W8              	98.87%
                    	       		D3AYG7              	92.63%
Bootstrap support for A8IZZ4 as seed ortholog is 100%.
Bootstrap support for D3BFQ9 as seed ortholog is 99%.

Group of orthologs #672. Best score 242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:242 P.pallidum:242

A8I3V3              	100.00%		D3B714              	100.00%
A8IXF1              	47.50%		
Bootstrap support for A8I3V3 as seed ortholog is 100%.
Bootstrap support for D3B714 as seed ortholog is 100%.

Group of orthologs #673. Best score 242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:242 P.pallidum:47

A8J8R3              	100.00%		D3BK81              	100.00%
A8J8R1              	44.94%		
Bootstrap support for A8J8R3 as seed ortholog is 100%.
Bootstrap support for D3BK81 as seed ortholog is 86%.

Group of orthologs #674. Best score 242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:242 P.pallidum:109

A8IJ34              	100.00%		D3B7Y5              	100.00%
Bootstrap support for A8IJ34 as seed ortholog is 100%.
Bootstrap support for D3B7Y5 as seed ortholog is 99%.

Group of orthologs #675. Best score 242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:242 P.pallidum:242

A8IA18              	100.00%		D3BBQ8              	100.00%
Bootstrap support for A8IA18 as seed ortholog is 100%.
Bootstrap support for D3BBQ8 as seed ortholog is 100%.

Group of orthologs #676. Best score 242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.pallidum:117

A8HQ77              	100.00%		D3BR84              	100.00%
Bootstrap support for A8HQ77 as seed ortholog is 100%.
Bootstrap support for D3BR84 as seed ortholog is 100%.

Group of orthologs #677. Best score 242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:242 P.pallidum:242

A8JGF8              	100.00%		D3BMH8              	100.00%
Bootstrap support for A8JGF8 as seed ortholog is 100%.
Bootstrap support for D3BMH8 as seed ortholog is 100%.

Group of orthologs #678. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.pallidum:240

A8HVE0              	100.00%		D3B9G2              	100.00%
Bootstrap support for A8HVE0 as seed ortholog is 90%.
Bootstrap support for D3B9G2 as seed ortholog is 100%.

Group of orthologs #679. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:240 P.pallidum:240

A8HYU2              	100.00%		D3BB37              	100.00%
Bootstrap support for A8HYU2 as seed ortholog is 100%.
Bootstrap support for D3BB37 as seed ortholog is 100%.

Group of orthologs #680. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.pallidum:240

A8J5L0              	100.00%		D3B5U7              	100.00%
Bootstrap support for A8J5L0 as seed ortholog is 99%.
Bootstrap support for D3B5U7 as seed ortholog is 100%.

Group of orthologs #681. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:240 P.pallidum:240

A8J8I3              	100.00%		D3BTN1              	100.00%
Bootstrap support for A8J8I3 as seed ortholog is 100%.
Bootstrap support for D3BTN1 as seed ortholog is 100%.

Group of orthologs #682. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 P.pallidum:48

A8J0B6              	100.00%		D3B0H8              	100.00%
                    	       		D3BN01              	28.27%
Bootstrap support for A8J0B6 as seed ortholog is 95%.
Bootstrap support for D3B0H8 as seed ortholog is 90%.

Group of orthologs #683. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.pallidum:239

A8IXQ0              	100.00%		D3BII7              	100.00%
Bootstrap support for A8IXQ0 as seed ortholog is 98%.
Bootstrap support for D3BII7 as seed ortholog is 100%.

Group of orthologs #684. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.pallidum:78

A8J6A0              	100.00%		D3BBG2              	100.00%
Bootstrap support for A8J6A0 as seed ortholog is 99%.
Bootstrap support for D3BBG2 as seed ortholog is 99%.

Group of orthologs #685. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:239 P.pallidum:239

A8JCR0              	100.00%		D3B6T4              	100.00%
Bootstrap support for A8JCR0 as seed ortholog is 100%.
Bootstrap support for D3B6T4 as seed ortholog is 100%.

Group of orthologs #686. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 P.pallidum:151

A8J3B0              	100.00%		D3BHT9              	100.00%
Bootstrap support for A8J3B0 as seed ortholog is 100%.
Bootstrap support for D3BHT9 as seed ortholog is 99%.

Group of orthologs #687. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.pallidum:239

Q6UPR1              	100.00%		D3BCA6              	100.00%
Bootstrap support for Q6UPR1 as seed ortholog is 99%.
Bootstrap support for D3BCA6 as seed ortholog is 100%.

Group of orthologs #688. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 P.pallidum:238

A8IB12              	100.00%		D3B0P9              	100.00%
Bootstrap support for A8IB12 as seed ortholog is 99%.
Bootstrap support for D3B0P9 as seed ortholog is 100%.

Group of orthologs #689. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:238 P.pallidum:165

A8HPZ9              	100.00%		D3BQK5              	100.00%
Bootstrap support for A8HPZ9 as seed ortholog is 100%.
Bootstrap support for D3BQK5 as seed ortholog is 99%.

Group of orthologs #690. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.pallidum:27

A8J0P9              	100.00%		D3B850              	100.00%
Bootstrap support for A8J0P9 as seed ortholog is 99%.
Bootstrap support for D3B850 as seed ortholog is 87%.

Group of orthologs #691. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.pallidum:160

A8J3M4              	100.00%		D3BE71              	100.00%
Bootstrap support for A8J3M4 as seed ortholog is 96%.
Bootstrap support for D3BE71 as seed ortholog is 99%.

Group of orthologs #692. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:38 P.pallidum:237

A8HWH6              	100.00%		D3B3C3              	100.00%
A8HYM5              	9.30%		
Bootstrap support for A8HWH6 as seed ortholog is 84%.
Bootstrap support for D3B3C3 as seed ortholog is 100%.

Group of orthologs #693. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 P.pallidum:237

A8J7L4              	100.00%		D3B6F1              	100.00%
                    	       		D3BMM3              	8.57%
Bootstrap support for A8J7L4 as seed ortholog is 100%.
Bootstrap support for D3B6F1 as seed ortholog is 100%.

Group of orthologs #694. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 P.pallidum:237

A8I4E1              	100.00%		D3B7W1              	100.00%
Bootstrap support for A8I4E1 as seed ortholog is 100%.
Bootstrap support for D3B7W1 as seed ortholog is 100%.

Group of orthologs #695. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 P.pallidum:237

A8I728              	100.00%		D3BKF4              	100.00%
Bootstrap support for A8I728 as seed ortholog is 100%.
Bootstrap support for D3BKF4 as seed ortholog is 100%.

Group of orthologs #696. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 P.pallidum:237

A8JAQ9              	100.00%		D3BB44              	100.00%
Bootstrap support for A8JAQ9 as seed ortholog is 100%.
Bootstrap support for D3BB44 as seed ortholog is 100%.

Group of orthologs #697. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 P.pallidum:237

A8J5Q8              	100.00%		D3BI13              	100.00%
Bootstrap support for A8J5Q8 as seed ortholog is 100%.
Bootstrap support for D3BI13 as seed ortholog is 100%.

Group of orthologs #698. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 P.pallidum:237

A8J6I6              	100.00%		D3BPI1              	100.00%
Bootstrap support for A8J6I6 as seed ortholog is 100%.
Bootstrap support for D3BPI1 as seed ortholog is 100%.

Group of orthologs #699. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 P.pallidum:237

A8JG06              	100.00%		D3BLX9              	100.00%
Bootstrap support for A8JG06 as seed ortholog is 100%.
Bootstrap support for D3BLX9 as seed ortholog is 100%.

Group of orthologs #700. Best score 234 bits
Score difference with first non-orthologous sequence - C.reinhardtii:234 P.pallidum:234

A8I4T2              	100.00%		D3BAC7              	100.00%
Bootstrap support for A8I4T2 as seed ortholog is 100%.
Bootstrap support for D3BAC7 as seed ortholog is 100%.

Group of orthologs #701. Best score 234 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 P.pallidum:161

A8J664              	100.00%		D3BEA5              	100.00%
Bootstrap support for A8J664 as seed ortholog is 99%.
Bootstrap support for D3BEA5 as seed ortholog is 99%.

Group of orthologs #702. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.pallidum:139

A8HNG4              	100.00%		D3AZ65              	100.00%
Bootstrap support for A8HNG4 as seed ortholog is 99%.
Bootstrap support for D3AZ65 as seed ortholog is 100%.

Group of orthologs #703. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 P.pallidum:141

A8HQ87              	100.00%		D3BAG5              	100.00%
Bootstrap support for A8HQ87 as seed ortholog is 100%.
Bootstrap support for D3BAG5 as seed ortholog is 100%.

Group of orthologs #704. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:233 P.pallidum:233

A8I9G5              	100.00%		D3BT25              	100.00%
Bootstrap support for A8I9G5 as seed ortholog is 100%.
Bootstrap support for D3BT25 as seed ortholog is 100%.

Group of orthologs #705. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.pallidum:154

A8JAX1              	100.00%		D3BU03              	100.00%
Bootstrap support for A8JAX1 as seed ortholog is 97%.
Bootstrap support for D3BU03 as seed ortholog is 100%.

Group of orthologs #706. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:28 P.pallidum:81

A8IWK6              	100.00%		D3B9Q6              	100.00%
                    	       		D3B9Q5              	50.47%
Bootstrap support for A8IWK6 as seed ortholog is 80%.
Bootstrap support for D3B9Q6 as seed ortholog is 99%.

Group of orthologs #707. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:232 P.pallidum:66

A8JGJ2              	100.00%		D3BAQ5              	100.00%
                    	       		D3AYF1              	6.92%
Bootstrap support for A8JGJ2 as seed ortholog is 100%.
Bootstrap support for D3BAQ5 as seed ortholog is 92%.

Group of orthologs #708. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.pallidum:88

A8JC41              	100.00%		D3BTA9              	100.00%
                    	       		D3BN02              	43.78%
Bootstrap support for A8JC41 as seed ortholog is 99%.
Bootstrap support for D3BTA9 as seed ortholog is 95%.

Group of orthologs #709. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:232 P.pallidum:232

A8HPW5              	100.00%		D3BAB7              	100.00%
Bootstrap support for A8HPW5 as seed ortholog is 100%.
Bootstrap support for D3BAB7 as seed ortholog is 100%.

Group of orthologs #710. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:182 P.pallidum:232

A8J768              	100.00%		D3B615              	100.00%
Bootstrap support for A8J768 as seed ortholog is 100%.
Bootstrap support for D3B615 as seed ortholog is 100%.

Group of orthologs #711. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:232 P.pallidum:232

A8JCR1              	100.00%		D3BJU2              	100.00%
Bootstrap support for A8JCR1 as seed ortholog is 100%.
Bootstrap support for D3BJU2 as seed ortholog is 100%.

Group of orthologs #712. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:232 P.pallidum:232

A8JE85              	100.00%		D3BTV0              	100.00%
Bootstrap support for A8JE85 as seed ortholog is 100%.
Bootstrap support for D3BTV0 as seed ortholog is 100%.

Group of orthologs #713. Best score 231 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 P.pallidum:231

A8IXD1              	100.00%		D3B9J0              	100.00%
Bootstrap support for A8IXD1 as seed ortholog is 99%.
Bootstrap support for D3B9J0 as seed ortholog is 100%.

Group of orthologs #714. Best score 231 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.pallidum:66

A8JAU3              	100.00%		D3BA42              	100.00%
Bootstrap support for A8JAU3 as seed ortholog is 91%.
Bootstrap support for D3BA42 as seed ortholog is 79%.

Group of orthologs #715. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:23 P.pallidum:230

A8HVW4              	100.00%		D3B3V0              	100.00%
                    	       		D3BJJ8              	10.34%
                    	       		D3B307              	9.45%
                    	       		D3AW52              	5.11%
Bootstrap support for A8HVW4 as seed ortholog is 65%.
Alternative seed ortholog is A8IKB4 (23 bits away from this cluster)
Bootstrap support for D3B3V0 as seed ortholog is 100%.

Group of orthologs #716. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:230 P.pallidum:230

A8IQV5              	100.00%		D3BGB9              	100.00%
Bootstrap support for A8IQV5 as seed ortholog is 100%.
Bootstrap support for D3BGB9 as seed ortholog is 100%.

Group of orthologs #717. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 P.pallidum:230

A8HQ81              	100.00%		D3BTV2              	100.00%
Bootstrap support for A8HQ81 as seed ortholog is 100%.
Bootstrap support for D3BTV2 as seed ortholog is 100%.

Group of orthologs #718. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:230 P.pallidum:57

A8J8Y6              	100.00%		D3B388              	100.00%
Bootstrap support for A8J8Y6 as seed ortholog is 100%.
Bootstrap support for D3B388 as seed ortholog is 87%.

Group of orthologs #719. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:230 P.pallidum:230

A8J724              	100.00%		D3BTM3              	100.00%
Bootstrap support for A8J724 as seed ortholog is 100%.
Bootstrap support for D3BTM3 as seed ortholog is 100%.

Group of orthologs #720. Best score 228 bits
Score difference with first non-orthologous sequence - C.reinhardtii:228 P.pallidum:228

A8I9S9              	100.00%		D3BN73              	100.00%
A8IA42              	16.75%		
A8JC21              	10.76%		
Bootstrap support for A8I9S9 as seed ortholog is 100%.
Bootstrap support for D3BN73 as seed ortholog is 100%.

Group of orthologs #721. Best score 228 bits
Score difference with first non-orthologous sequence - C.reinhardtii:228 P.pallidum:228

A8ITA7              	100.00%		D3BEZ3              	100.00%
Bootstrap support for A8ITA7 as seed ortholog is 100%.
Bootstrap support for D3BEZ3 as seed ortholog is 100%.

Group of orthologs #722. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:28 P.pallidum:52

A8IXI7              	100.00%		D3B3V9              	100.00%
Bootstrap support for A8IXI7 as seed ortholog is 78%.
Bootstrap support for D3B3V9 as seed ortholog is 90%.

Group of orthologs #723. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:227 P.pallidum:227

A8IJK3              	100.00%		D3BAL0              	100.00%
Bootstrap support for A8IJK3 as seed ortholog is 100%.
Bootstrap support for D3BAL0 as seed ortholog is 100%.

Group of orthologs #724. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 P.pallidum:227

A8I665              	100.00%		D3BLE5              	100.00%
Bootstrap support for A8I665 as seed ortholog is 100%.
Bootstrap support for D3BLE5 as seed ortholog is 100%.

Group of orthologs #725. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:227 P.pallidum:227

A8I9K8              	100.00%		D3BMW4              	100.00%
Bootstrap support for A8I9K8 as seed ortholog is 100%.
Bootstrap support for D3BMW4 as seed ortholog is 100%.

Group of orthologs #726. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:227 P.pallidum:185

A8J3C7              	100.00%		D3BHK8              	100.00%
Bootstrap support for A8J3C7 as seed ortholog is 100%.
Bootstrap support for D3BHK8 as seed ortholog is 100%.

Group of orthologs #727. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:227 P.pallidum:227

A8J593              	100.00%		D3BH65              	100.00%
Bootstrap support for A8J593 as seed ortholog is 100%.
Bootstrap support for D3BH65 as seed ortholog is 100%.

Group of orthologs #728. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:227 P.pallidum:227

A8JGN6              	100.00%		D3BDG0              	100.00%
Bootstrap support for A8JGN6 as seed ortholog is 100%.
Bootstrap support for D3BDG0 as seed ortholog is 100%.

Group of orthologs #729. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.pallidum:60

Q66YD3              	100.00%		D3BEC0              	100.00%
Bootstrap support for Q66YD3 as seed ortholog is 99%.
Bootstrap support for D3BEC0 as seed ortholog is 89%.

Group of orthologs #730. Best score 226 bits
Score difference with first non-orthologous sequence - C.reinhardtii:33 P.pallidum:110

A8JBN8              	100.00%		D3BK86              	100.00%
                    	       		D3BG73              	15.18%
Bootstrap support for A8JBN8 as seed ortholog is 80%.
Bootstrap support for D3BK86 as seed ortholog is 99%.

Group of orthologs #731. Best score 226 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.pallidum:143

A8IGT6              	100.00%		D3BCJ1              	100.00%
Bootstrap support for A8IGT6 as seed ortholog is 98%.
Bootstrap support for D3BCJ1 as seed ortholog is 99%.

Group of orthologs #732. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 P.pallidum:225

A8ISA9              	100.00%		D3BRT1              	100.00%
A8IEE5              	51.40%		
A8J434              	41.25%		
Bootstrap support for A8ISA9 as seed ortholog is 100%.
Bootstrap support for D3BRT1 as seed ortholog is 100%.

Group of orthologs #733. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 P.pallidum:225

A8HPN6              	100.00%		D3B9B9              	100.00%
Bootstrap support for A8HPN6 as seed ortholog is 100%.
Bootstrap support for D3B9B9 as seed ortholog is 100%.

Group of orthologs #734. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 P.pallidum:225

A8JBN4              	100.00%		D3B1Z3              	100.00%
Bootstrap support for A8JBN4 as seed ortholog is 100%.
Bootstrap support for D3B1Z3 as seed ortholog is 100%.

Group of orthologs #735. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 P.pallidum:133

A8JCX9              	100.00%		D3BHB9              	100.00%
Bootstrap support for A8JCX9 as seed ortholog is 100%.
Bootstrap support for D3BHB9 as seed ortholog is 100%.

Group of orthologs #736. Best score 224 bits
Score difference with first non-orthologous sequence - C.reinhardtii:173 P.pallidum:151

A8IWL4              	100.00%		D3BT42              	100.00%
                    	       		D3BT43              	85.81%
Bootstrap support for A8IWL4 as seed ortholog is 100%.
Bootstrap support for D3BT42 as seed ortholog is 100%.

Group of orthologs #737. Best score 224 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 P.pallidum:126

A8HQU6              	100.00%		D3AWX8              	100.00%
Bootstrap support for A8HQU6 as seed ortholog is 98%.
Bootstrap support for D3AWX8 as seed ortholog is 99%.

Group of orthologs #738. Best score 224 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.pallidum:158

A8HM32              	100.00%		D3BNI9              	100.00%
Bootstrap support for A8HM32 as seed ortholog is 99%.
Bootstrap support for D3BNI9 as seed ortholog is 99%.

Group of orthologs #739. Best score 223 bits
Score difference with first non-orthologous sequence - C.reinhardtii:223 P.pallidum:223

A8JCX4              	100.00%		D3B2D5              	100.00%
                    	       		D3BMK7              	35.32%
Bootstrap support for A8JCX4 as seed ortholog is 100%.
Bootstrap support for D3B2D5 as seed ortholog is 100%.

Group of orthologs #740. Best score 223 bits
Score difference with first non-orthologous sequence - C.reinhardtii:223 P.pallidum:223

A8J3T9              	100.00%		D3AXB8              	100.00%
Bootstrap support for A8J3T9 as seed ortholog is 100%.
Bootstrap support for D3AXB8 as seed ortholog is 100%.

Group of orthologs #741. Best score 223 bits
Score difference with first non-orthologous sequence - C.reinhardtii:223 P.pallidum:223

A8IC04              	100.00%		D3BS88              	100.00%
Bootstrap support for A8IC04 as seed ortholog is 100%.
Bootstrap support for D3BS88 as seed ortholog is 100%.

Group of orthologs #742. Best score 223 bits
Score difference with first non-orthologous sequence - C.reinhardtii:35 P.pallidum:85

A8JF16              	100.00%		D3BJI2              	100.00%
Bootstrap support for A8JF16 as seed ortholog is 83%.
Bootstrap support for D3BJI2 as seed ortholog is 98%.

Group of orthologs #743. Best score 223 bits
Score difference with first non-orthologous sequence - C.reinhardtii:223 P.pallidum:223

Q6V9B3              	100.00%		D3BVI2              	100.00%
Bootstrap support for Q6V9B3 as seed ortholog is 100%.
Bootstrap support for D3BVI2 as seed ortholog is 100%.

Group of orthologs #744. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:222 P.pallidum:222

A8HZC5              	100.00%		D3B0K6              	100.00%
Bootstrap support for A8HZC5 as seed ortholog is 100%.
Bootstrap support for D3B0K6 as seed ortholog is 100%.

Group of orthologs #745. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.pallidum:98

A8J9U3              	100.00%		D3AX98              	100.00%
Bootstrap support for A8J9U3 as seed ortholog is 99%.
Bootstrap support for D3AX98 as seed ortholog is 99%.

Group of orthologs #746. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.pallidum:49

A8IRR7              	100.00%		D3BG42              	100.00%
Bootstrap support for A8IRR7 as seed ortholog is 99%.
Bootstrap support for D3BG42 as seed ortholog is 82%.

Group of orthologs #747. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:222 P.pallidum:106

A8JBL7              	100.00%		D3BM94              	100.00%
Bootstrap support for A8JBL7 as seed ortholog is 100%.
Bootstrap support for D3BM94 as seed ortholog is 99%.

Group of orthologs #748. Best score 221 bits
Score difference with first non-orthologous sequence - C.reinhardtii:4 P.pallidum:48

A8I0R6              	100.00%		D3BGZ5              	100.00%
                    	       		D3BKT2              	17.99%
Bootstrap support for A8I0R6 as seed ortholog is 55%.
Alternative seed ortholog is Q6V8K6 (4 bits away from this cluster)
Bootstrap support for D3BGZ5 as seed ortholog is 94%.

Group of orthologs #749. Best score 221 bits
Score difference with first non-orthologous sequence - C.reinhardtii:221 P.pallidum:129

A8I4A8              	100.00%		D3AYR4              	100.00%
Bootstrap support for A8I4A8 as seed ortholog is 100%.
Bootstrap support for D3AYR4 as seed ortholog is 100%.

Group of orthologs #750. Best score 221 bits
Score difference with first non-orthologous sequence - C.reinhardtii:221 P.pallidum:221

A8IHQ7              	100.00%		D3AYE5              	100.00%
Bootstrap support for A8IHQ7 as seed ortholog is 100%.
Bootstrap support for D3AYE5 as seed ortholog is 100%.

Group of orthologs #751. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 P.pallidum:62

A8J9M0              	100.00%		D3BUT3              	100.00%
A8HSA7              	100.00%		D3B633              	100.00%
A8IK09              	100.00%		D3B6K9              	36.36%
A8HWY2              	95.35%		
Bootstrap support for A8J9M0 as seed ortholog is 99%.
Bootstrap support for A8HSA7 as seed ortholog is 99%.
Bootstrap support for A8IK09 as seed ortholog is 99%.
Bootstrap support for D3BUT3 as seed ortholog is 99%.
Bootstrap support for D3B633 as seed ortholog is 100%.

Group of orthologs #752. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 P.pallidum:220

A8IYI0              	100.00%		D3AZN2              	100.00%
                    	       		D3B0C2              	50.74%
Bootstrap support for A8IYI0 as seed ortholog is 63%.
Alternative seed ortholog is A8I9H8 (27 bits away from this cluster)
Bootstrap support for D3AZN2 as seed ortholog is 100%.

Group of orthologs #753. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:134 P.pallidum:220

A8JEY5              	100.00%		D3BSH6              	100.00%
Bootstrap support for A8JEY5 as seed ortholog is 99%.
Bootstrap support for D3BSH6 as seed ortholog is 100%.

Group of orthologs #754. Best score 219 bits
Score difference with first non-orthologous sequence - C.reinhardtii:219 P.pallidum:101

A8JGJ0              	100.00%		D3B5M9              	100.00%
A8J8M1              	27.01%		
Bootstrap support for A8JGJ0 as seed ortholog is 100%.
Bootstrap support for D3B5M9 as seed ortholog is 99%.

Group of orthologs #755. Best score 219 bits
Score difference with first non-orthologous sequence - C.reinhardtii:219 P.pallidum:219

A8I0B0              	100.00%		D3B886              	100.00%
Bootstrap support for A8I0B0 as seed ortholog is 100%.
Bootstrap support for D3B886 as seed ortholog is 100%.

Group of orthologs #756. Best score 219 bits
Score difference with first non-orthologous sequence - C.reinhardtii:219 P.pallidum:101

A8J7V0              	100.00%		D3BC04              	100.00%
Bootstrap support for A8J7V0 as seed ortholog is 100%.
Bootstrap support for D3BC04 as seed ortholog is 98%.

Group of orthologs #757. Best score 219 bits
Score difference with first non-orthologous sequence - C.reinhardtii:219 P.pallidum:219

A8JDZ8              	100.00%		D3BTZ3              	100.00%
Bootstrap support for A8JDZ8 as seed ortholog is 100%.
Bootstrap support for D3BTZ3 as seed ortholog is 100%.

Group of orthologs #758. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 P.pallidum:218

A8HTX3              	100.00%		D3B5T9              	100.00%
Bootstrap support for A8HTX3 as seed ortholog is 100%.
Bootstrap support for D3B5T9 as seed ortholog is 100%.

Group of orthologs #759. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 P.pallidum:218

A8I1C7              	100.00%		D3BCE5              	100.00%
Bootstrap support for A8I1C7 as seed ortholog is 100%.
Bootstrap support for D3BCE5 as seed ortholog is 100%.

Group of orthologs #760. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.pallidum:218

A8ISQ2              	100.00%		D3BCJ7              	100.00%
Bootstrap support for A8ISQ2 as seed ortholog is 99%.
Bootstrap support for D3BCJ7 as seed ortholog is 100%.

Group of orthologs #761. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 P.pallidum:163

A8I893              	100.00%		D3BMT3              	100.00%
Bootstrap support for A8I893 as seed ortholog is 100%.
Bootstrap support for D3BMT3 as seed ortholog is 100%.

Group of orthologs #762. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 P.pallidum:218

A8J1Q1              	100.00%		D3BCA4              	100.00%
Bootstrap support for A8J1Q1 as seed ortholog is 100%.
Bootstrap support for D3BCA4 as seed ortholog is 100%.

Group of orthologs #763. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 P.pallidum:129

A8J275              	100.00%		D3BKA2              	100.00%
Bootstrap support for A8J275 as seed ortholog is 100%.
Bootstrap support for D3BKA2 as seed ortholog is 100%.

Group of orthologs #764. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:218 P.pallidum:218

A8J5A8              	100.00%		D3BNL3              	100.00%
Bootstrap support for A8J5A8 as seed ortholog is 100%.
Bootstrap support for D3BNL3 as seed ortholog is 100%.

Group of orthologs #765. Best score 217 bits
Score difference with first non-orthologous sequence - C.reinhardtii:38 P.pallidum:55

A8J274              	100.00%		D3B3T2              	100.00%
Bootstrap support for A8J274 as seed ortholog is 95%.
Bootstrap support for D3B3T2 as seed ortholog is 99%.

Group of orthologs #766. Best score 217 bits
Score difference with first non-orthologous sequence - C.reinhardtii:217 P.pallidum:217

A8IW48              	100.00%		D3BBM0              	100.00%
Bootstrap support for A8IW48 as seed ortholog is 100%.
Bootstrap support for D3BBM0 as seed ortholog is 100%.

Group of orthologs #767. Best score 217 bits
Score difference with first non-orthologous sequence - C.reinhardtii:217 P.pallidum:217

A8JG68              	100.00%		D3B2J9              	100.00%
Bootstrap support for A8JG68 as seed ortholog is 100%.
Bootstrap support for D3B2J9 as seed ortholog is 100%.

Group of orthologs #768. Best score 217 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.pallidum:217

A8JII0              	100.00%		D3B5I5              	100.00%
Bootstrap support for A8JII0 as seed ortholog is 99%.
Bootstrap support for D3B5I5 as seed ortholog is 100%.

Group of orthologs #769. Best score 217 bits
Score difference with first non-orthologous sequence - C.reinhardtii:217 P.pallidum:217

A8JH21              	100.00%		D3BC66              	100.00%
Bootstrap support for A8JH21 as seed ortholog is 100%.
Bootstrap support for D3BC66 as seed ortholog is 100%.

Group of orthologs #770. Best score 217 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.pallidum:88

A8JGI0              	100.00%		D3BH42              	100.00%
Bootstrap support for A8JGI0 as seed ortholog is 99%.
Bootstrap support for D3BH42 as seed ortholog is 99%.

Group of orthologs #771. Best score 217 bits
Score difference with first non-orthologous sequence - C.reinhardtii:25 P.pallidum:217

A8JJ26              	100.00%		D3BHJ9              	100.00%
Bootstrap support for A8JJ26 as seed ortholog is 85%.
Bootstrap support for D3BHJ9 as seed ortholog is 100%.

Group of orthologs #772. Best score 216 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 P.pallidum:216

A8HVP2              	100.00%		D3B1K3              	100.00%
Bootstrap support for A8HVP2 as seed ortholog is 100%.
Bootstrap support for D3B1K3 as seed ortholog is 100%.

Group of orthologs #773. Best score 216 bits
Score difference with first non-orthologous sequence - C.reinhardtii:216 P.pallidum:216

A8IV36              	100.00%		D3B206              	100.00%
Bootstrap support for A8IV36 as seed ortholog is 100%.
Bootstrap support for D3B206 as seed ortholog is 100%.

Group of orthologs #774. Best score 216 bits
Score difference with first non-orthologous sequence - C.reinhardtii:216 P.pallidum:216

A8HT69              	100.00%		D3BH38              	100.00%
Bootstrap support for A8HT69 as seed ortholog is 100%.
Bootstrap support for D3BH38 as seed ortholog is 100%.

Group of orthologs #775. Best score 216 bits
Score difference with first non-orthologous sequence - C.reinhardtii:216 P.pallidum:216

A8JBC8              	100.00%		D3BJY8              	100.00%
Bootstrap support for A8JBC8 as seed ortholog is 100%.
Bootstrap support for D3BJY8 as seed ortholog is 100%.

Group of orthologs #776. Best score 216 bits
Score difference with first non-orthologous sequence - C.reinhardtii:216 P.pallidum:216

A8J567              	100.00%		D3BV19              	100.00%
Bootstrap support for A8J567 as seed ortholog is 100%.
Bootstrap support for D3BV19 as seed ortholog is 100%.

Group of orthologs #777. Best score 215 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 P.pallidum:151

A8J8G5              	100.00%		D3B3S8              	100.00%
Bootstrap support for A8J8G5 as seed ortholog is 99%.
Bootstrap support for D3B3S8 as seed ortholog is 100%.

Group of orthologs #778. Best score 215 bits
Score difference with first non-orthologous sequence - C.reinhardtii:215 P.pallidum:215

A8JA17              	100.00%		D3BML2              	100.00%
Bootstrap support for A8JA17 as seed ortholog is 100%.
Bootstrap support for D3BML2 as seed ortholog is 100%.

Group of orthologs #779. Best score 214 bits
Score difference with first non-orthologous sequence - C.reinhardtii:214 P.pallidum:214

A8JHK4              	100.00%		D3B7N0              	100.00%
Bootstrap support for A8JHK4 as seed ortholog is 100%.
Bootstrap support for D3B7N0 as seed ortholog is 100%.

Group of orthologs #780. Best score 214 bits
Score difference with first non-orthologous sequence - C.reinhardtii:214 P.pallidum:161

A8J8S7              	100.00%		D3BQQ9              	100.00%
Bootstrap support for A8J8S7 as seed ortholog is 100%.
Bootstrap support for D3BQQ9 as seed ortholog is 100%.

Group of orthologs #781. Best score 214 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 P.pallidum:147

Q84X74              	100.00%		D3BVF8              	100.00%
Bootstrap support for Q84X74 as seed ortholog is 99%.
Bootstrap support for D3BVF8 as seed ortholog is 99%.

Group of orthologs #782. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.pallidum:213

A8JGH3              	100.00%		D3AZF2              	100.00%
A8JGH0              	100.00%		D3BNF0              	100.00%
A8J1F3              	21.62%		
A8JGH2              	21.54%		
A8JGH4              	21.34%		
Bootstrap support for A8JGH3 as seed ortholog is 83%.
Bootstrap support for A8JGH0 as seed ortholog is 61%.
Alternative seed ortholog is A8HT24 (53 bits away from this cluster)
Bootstrap support for D3AZF2 as seed ortholog is 100%.
Bootstrap support for D3BNF0 as seed ortholog is 100%.

Group of orthologs #783. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 P.pallidum:213

A8IHW0              	100.00%		D3BIJ6              	100.00%
A8HPG3              	12.42%		D3BAX5              	23.79%
A8HNF6              	7.78%		
A8IIZ1              	6.90%		
Bootstrap support for A8IHW0 as seed ortholog is 69%.
Alternative seed ortholog is A8JD26 (20 bits away from this cluster)
Bootstrap support for D3BIJ6 as seed ortholog is 100%.

Group of orthologs #784. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:213 P.pallidum:213

A8JCW5              	100.00%		D3B0J5              	100.00%
Bootstrap support for A8JCW5 as seed ortholog is 100%.
Bootstrap support for D3B0J5 as seed ortholog is 100%.

Group of orthologs #785. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:213 P.pallidum:213

A8IV05              	100.00%		D3BG85              	100.00%
Bootstrap support for A8IV05 as seed ortholog is 100%.
Bootstrap support for D3BG85 as seed ortholog is 100%.

Group of orthologs #786. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:213 P.pallidum:113

A8JGQ3              	100.00%		D3AZW2              	100.00%
Bootstrap support for A8JGQ3 as seed ortholog is 100%.
Bootstrap support for D3AZW2 as seed ortholog is 99%.

Group of orthologs #787. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:212 P.pallidum:212

A8J1W0              	100.00%		D3AWL9              	100.00%
Bootstrap support for A8J1W0 as seed ortholog is 100%.
Bootstrap support for D3AWL9 as seed ortholog is 100%.

Group of orthologs #788. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 P.pallidum:212

A8IS90              	100.00%		D3B611              	100.00%
Bootstrap support for A8IS90 as seed ortholog is 99%.
Bootstrap support for D3B611 as seed ortholog is 100%.

Group of orthologs #789. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.pallidum:96

A8JC30              	100.00%		D3B2M5              	100.00%
Bootstrap support for A8JC30 as seed ortholog is 100%.
Bootstrap support for D3B2M5 as seed ortholog is 99%.

Group of orthologs #790. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:212 P.pallidum:168

A8J5F4              	100.00%		D3BRV0              	100.00%
Bootstrap support for A8J5F4 as seed ortholog is 100%.
Bootstrap support for D3BRV0 as seed ortholog is 99%.

Group of orthologs #791. Best score 211 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 P.pallidum:211

A8JFB1              	100.00%		D3BM56              	100.00%
Bootstrap support for A8JFB1 as seed ortholog is 99%.
Bootstrap support for D3BM56 as seed ortholog is 100%.

Group of orthologs #792. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.pallidum:103

A8HM62              	100.00%		D3BHG1              	100.00%
Bootstrap support for A8HM62 as seed ortholog is 99%.
Bootstrap support for D3BHG1 as seed ortholog is 99%.

Group of orthologs #793. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:210 P.pallidum:210

A8I678              	100.00%		D3BNC7              	100.00%
Bootstrap support for A8I678 as seed ortholog is 100%.
Bootstrap support for D3BNC7 as seed ortholog is 100%.

Group of orthologs #794. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 P.pallidum:67

A8JFY4              	100.00%		D3B2T9              	100.00%
Bootstrap support for A8JFY4 as seed ortholog is 99%.
Bootstrap support for D3B2T9 as seed ortholog is 99%.

Group of orthologs #795. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 P.pallidum:210

A8IJQ4              	100.00%		D3BV90              	100.00%
Bootstrap support for A8IJQ4 as seed ortholog is 100%.
Bootstrap support for D3BV90 as seed ortholog is 100%.

Group of orthologs #796. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:210 P.pallidum:210

A8JIU5              	100.00%		D3BR69              	100.00%
Bootstrap support for A8JIU5 as seed ortholog is 100%.
Bootstrap support for D3BR69 as seed ortholog is 100%.

Group of orthologs #797. Best score 209 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 P.pallidum:209

A8ISD7              	100.00%		D3AX40              	100.00%
Q8LP69              	100.00%		
A8ISD6              	89.60%		
Q8LP71              	72.56%		
Bootstrap support for A8ISD7 as seed ortholog is 99%.
Bootstrap support for Q8LP69 as seed ortholog is 99%.
Bootstrap support for D3AX40 as seed ortholog is 100%.

Group of orthologs #798. Best score 209 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.pallidum:78

A8I2M8              	100.00%		D3BB25              	100.00%
Bootstrap support for A8I2M8 as seed ortholog is 88%.
Bootstrap support for D3BB25 as seed ortholog is 95%.

Group of orthologs #799. Best score 208 bits
Score difference with first non-orthologous sequence - C.reinhardtii:208 P.pallidum:208

A8J597              	100.00%		D3BPW6              	100.00%
Bootstrap support for A8J597 as seed ortholog is 100%.
Bootstrap support for D3BPW6 as seed ortholog is 100%.

Group of orthologs #800. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 P.pallidum:207

A8ICC8              	100.00%		D3B3C1              	100.00%
Bootstrap support for A8ICC8 as seed ortholog is 100%.
Bootstrap support for D3B3C1 as seed ortholog is 100%.

Group of orthologs #801. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:207 P.pallidum:207

Q9ATG8              	100.00%		D3BUX7              	100.00%
Bootstrap support for Q9ATG8 as seed ortholog is 100%.
Bootstrap support for D3BUX7 as seed ortholog is 100%.

Group of orthologs #802. Best score 206 bits
Score difference with first non-orthologous sequence - C.reinhardtii:206 P.pallidum:206

A8IRC0              	100.00%		D3B151              	100.00%
Bootstrap support for A8IRC0 as seed ortholog is 100%.
Bootstrap support for D3B151 as seed ortholog is 100%.

Group of orthologs #803. Best score 206 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.pallidum:206

A8IFN0              	100.00%		D3B8J0              	100.00%
Bootstrap support for A8IFN0 as seed ortholog is 87%.
Bootstrap support for D3B8J0 as seed ortholog is 100%.

Group of orthologs #804. Best score 206 bits
Score difference with first non-orthologous sequence - C.reinhardtii:206 P.pallidum:206

A8IR47              	100.00%		D3BAI7              	100.00%
Bootstrap support for A8IR47 as seed ortholog is 100%.
Bootstrap support for D3BAI7 as seed ortholog is 100%.

Group of orthologs #805. Best score 206 bits
Score difference with first non-orthologous sequence - C.reinhardtii:206 P.pallidum:206

A8IVF0              	100.00%		D3BI88              	100.00%
Bootstrap support for A8IVF0 as seed ortholog is 100%.
Bootstrap support for D3BI88 as seed ortholog is 100%.

Group of orthologs #806. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 P.pallidum:205

A8HUP5              	100.00%		D3B5D4              	100.00%
A8J386              	32.73%		
Bootstrap support for A8HUP5 as seed ortholog is 100%.
Bootstrap support for D3B5D4 as seed ortholog is 100%.

Group of orthologs #807. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 P.pallidum:71

A8HMG4              	100.00%		D3BDR3              	100.00%
                    	       		D3BME1              	16.15%
Bootstrap support for A8HMG4 as seed ortholog is 100%.
Bootstrap support for D3BDR3 as seed ortholog is 86%.

Group of orthologs #808. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 P.pallidum:117

A8IGH1              	100.00%		D3BD39              	100.00%
                    	       		D3BD41              	83.18%
Bootstrap support for A8IGH1 as seed ortholog is 89%.
Bootstrap support for D3BD39 as seed ortholog is 99%.

Group of orthologs #809. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 P.pallidum:205

A8I517              	100.00%		D3B4P3              	100.00%
Bootstrap support for A8I517 as seed ortholog is 100%.
Bootstrap support for D3B4P3 as seed ortholog is 100%.

Group of orthologs #810. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 P.pallidum:205

A8IEH6              	100.00%		D3BBS1              	100.00%
Bootstrap support for A8IEH6 as seed ortholog is 100%.
Bootstrap support for D3BBS1 as seed ortholog is 100%.

Group of orthologs #811. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 P.pallidum:205

A8I029              	100.00%		D3BM11              	100.00%
Bootstrap support for A8I029 as seed ortholog is 100%.
Bootstrap support for D3BM11 as seed ortholog is 100%.

Group of orthologs #812. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 P.pallidum:205

A8IWU0              	100.00%		D3BC68              	100.00%
Bootstrap support for A8IWU0 as seed ortholog is 100%.
Bootstrap support for D3BC68 as seed ortholog is 100%.

Group of orthologs #813. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 P.pallidum:205

A8IX41              	100.00%		D3BCC1              	100.00%
Bootstrap support for A8IX41 as seed ortholog is 100%.
Bootstrap support for D3BCC1 as seed ortholog is 100%.

Group of orthologs #814. Best score 204 bits
Score difference with first non-orthologous sequence - C.reinhardtii:38 P.pallidum:79

A8J3X0              	100.00%		D3B1H0              	100.00%
A8IL00              	5.74%		
Bootstrap support for A8J3X0 as seed ortholog is 85%.
Bootstrap support for D3B1H0 as seed ortholog is 98%.

Group of orthologs #815. Best score 204 bits
Score difference with first non-orthologous sequence - C.reinhardtii:204 P.pallidum:204

A8IJQ1              	100.00%		D3B864              	100.00%
Bootstrap support for A8IJQ1 as seed ortholog is 100%.
Bootstrap support for D3B864 as seed ortholog is 100%.

Group of orthologs #816. Best score 204 bits
Score difference with first non-orthologous sequence - C.reinhardtii:204 P.pallidum:204

A8IE44              	100.00%		D3BAF1              	100.00%
Bootstrap support for A8IE44 as seed ortholog is 100%.
Bootstrap support for D3BAF1 as seed ortholog is 100%.

Group of orthologs #817. Best score 204 bits
Score difference with first non-orthologous sequence - C.reinhardtii:204 P.pallidum:204

A8IJX8              	100.00%		D3BM88              	100.00%
Bootstrap support for A8IJX8 as seed ortholog is 100%.
Bootstrap support for D3BM88 as seed ortholog is 100%.

Group of orthologs #818. Best score 204 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 P.pallidum:143

A8JDZ2              	100.00%		D3B763              	100.00%
Bootstrap support for A8JDZ2 as seed ortholog is 99%.
Bootstrap support for D3B763 as seed ortholog is 99%.

Group of orthologs #819. Best score 204 bits
Score difference with first non-orthologous sequence - C.reinhardtii:204 P.pallidum:204

Q9S7V1              	100.00%		D3BUX6              	100.00%
Bootstrap support for Q9S7V1 as seed ortholog is 100%.
Bootstrap support for D3BUX6 as seed ortholog is 100%.

Group of orthologs #820. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:38 P.pallidum:43

A8I4Q7              	100.00%		D3AY70              	100.00%
Bootstrap support for A8I4Q7 as seed ortholog is 95%.
Bootstrap support for D3AY70 as seed ortholog is 96%.

Group of orthologs #821. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 P.pallidum:203

A8IZA4              	100.00%		D3B7C4              	100.00%
Bootstrap support for A8IZA4 as seed ortholog is 100%.
Bootstrap support for D3B7C4 as seed ortholog is 100%.

Group of orthologs #822. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 P.pallidum:203

A8HQG9              	100.00%		D3BS22              	100.00%
Bootstrap support for A8HQG9 as seed ortholog is 99%.
Bootstrap support for D3BS22 as seed ortholog is 100%.

Group of orthologs #823. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 P.pallidum:203

A8I1Y7              	100.00%		D3BNG5              	100.00%
Bootstrap support for A8I1Y7 as seed ortholog is 100%.
Bootstrap support for D3BNG5 as seed ortholog is 100%.

Group of orthologs #824. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 P.pallidum:203

A8HQJ4              	100.00%		D3BSU4              	100.00%
Bootstrap support for A8HQJ4 as seed ortholog is 100%.
Bootstrap support for D3BSU4 as seed ortholog is 100%.

Group of orthologs #825. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:10 P.pallidum:203

A8JER8              	100.00%		D3AX20              	100.00%
Bootstrap support for A8JER8 as seed ortholog is 62%.
Alternative seed ortholog is A8IX31 (10 bits away from this cluster)
Bootstrap support for D3AX20 as seed ortholog is 100%.

Group of orthologs #826. Best score 202 bits
Score difference with first non-orthologous sequence - C.reinhardtii:202 P.pallidum:202

A8JB06              	100.00%		D3B056              	100.00%
Bootstrap support for A8JB06 as seed ortholog is 100%.
Bootstrap support for D3B056 as seed ortholog is 100%.

Group of orthologs #827. Best score 202 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 P.pallidum:202

A8JDP4              	100.00%		D3BMQ1              	100.00%
Bootstrap support for A8JDP4 as seed ortholog is 100%.
Bootstrap support for D3BMQ1 as seed ortholog is 100%.

Group of orthologs #828. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 P.pallidum:34

A8HSJ3              	100.00%		D3AVR4              	100.00%
A8IPQ9              	18.41%		
A8IHF4              	17.66%		
A8I2U7              	15.80%		
A8J365              	12.94%		
A8JI59              	10.57%		
A8JD03              	10.45%		
A8IPF1              	7.96%		
Bootstrap support for A8HSJ3 as seed ortholog is 100%.
Bootstrap support for D3AVR4 as seed ortholog is 81%.

Group of orthologs #829. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 P.pallidum:201

A8JFB8              	100.00%		D3BGZ6              	100.00%
A8J006              	20.75%		
A8J9M5              	14.03%		
A8IZ81              	12.24%		
A8IRP0              	5.82%		
Bootstrap support for A8JFB8 as seed ortholog is 83%.
Bootstrap support for D3BGZ6 as seed ortholog is 100%.

Group of orthologs #830. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 P.pallidum:201

A8HM76              	100.00%		D3B2Q7              	100.00%
A8J9M4              	9.50%		
Bootstrap support for A8HM76 as seed ortholog is 100%.
Bootstrap support for D3B2Q7 as seed ortholog is 100%.

Group of orthologs #831. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.pallidum:201

A8I2N1              	100.00%		D3BN51              	100.00%
Bootstrap support for A8I2N1 as seed ortholog is 99%.
Bootstrap support for D3BN51 as seed ortholog is 100%.

Group of orthologs #832. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 P.pallidum:201

A8J9D3              	100.00%		D3BCA0              	100.00%
Bootstrap support for A8J9D3 as seed ortholog is 100%.
Bootstrap support for D3BCA0 as seed ortholog is 100%.

Group of orthologs #833. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.pallidum:92

A8IR89              	100.00%		D3BAL9              	100.00%
Bootstrap support for A8IR89 as seed ortholog is 99%.
Bootstrap support for D3BAL9 as seed ortholog is 99%.

Group of orthologs #834. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 P.pallidum:200

A8J7S5              	100.00%		D3B6Y3              	100.00%
Bootstrap support for A8J7S5 as seed ortholog is 100%.
Bootstrap support for D3B6Y3 as seed ortholog is 100%.

Group of orthologs #835. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 P.pallidum:85

A8I427              	100.00%		D3BSG7              	100.00%
Bootstrap support for A8I427 as seed ortholog is 99%.
Bootstrap support for D3BSG7 as seed ortholog is 99%.

Group of orthologs #836. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 P.pallidum:200

A8JH66              	100.00%		D3B6U5              	100.00%
Bootstrap support for A8JH66 as seed ortholog is 100%.
Bootstrap support for D3B6U5 as seed ortholog is 100%.

Group of orthologs #837. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 P.pallidum:200

A8JGI9              	100.00%		D3B963              	100.00%
Bootstrap support for A8JGI9 as seed ortholog is 100%.
Bootstrap support for D3B963 as seed ortholog is 100%.

Group of orthologs #838. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 P.pallidum:200

A8JDV8              	100.00%		D3BHH0              	100.00%
Bootstrap support for A8JDV8 as seed ortholog is 100%.
Bootstrap support for D3BHH0 as seed ortholog is 100%.

Group of orthologs #839. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 P.pallidum:200

A8J8J1              	100.00%		D3BU31              	100.00%
Bootstrap support for A8J8J1 as seed ortholog is 100%.
Bootstrap support for D3BU31 as seed ortholog is 100%.

Group of orthologs #840. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 P.pallidum:128

A8HNJ4              	100.00%		D3BM05              	100.00%
A8JDZ5              	5.95%		
Bootstrap support for A8HNJ4 as seed ortholog is 81%.
Bootstrap support for D3BM05 as seed ortholog is 99%.

Group of orthologs #841. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 P.pallidum:199

A8IGY1              	100.00%		D3BBQ0              	100.00%
Bootstrap support for A8IGY1 as seed ortholog is 100%.
Bootstrap support for D3BBQ0 as seed ortholog is 100%.

Group of orthologs #842. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 P.pallidum:199

A8HRV5              	100.00%		D3BQD0              	100.00%
Bootstrap support for A8HRV5 as seed ortholog is 100%.
Bootstrap support for D3BQD0 as seed ortholog is 100%.

Group of orthologs #843. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 P.pallidum:199

A8IWT5              	100.00%		D3BCW0              	100.00%
Bootstrap support for A8IWT5 as seed ortholog is 100%.
Bootstrap support for D3BCW0 as seed ortholog is 100%.

Group of orthologs #844. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 P.pallidum:199

A8JED2              	100.00%		D3B866              	100.00%
Bootstrap support for A8JED2 as seed ortholog is 100%.
Bootstrap support for D3B866 as seed ortholog is 100%.

Group of orthologs #845. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 P.pallidum:199

A8JAN2              	100.00%		D3BU02              	100.00%
Bootstrap support for A8JAN2 as seed ortholog is 100%.
Bootstrap support for D3BU02 as seed ortholog is 100%.

Group of orthologs #846. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 P.pallidum:198

A8HVT9              	100.00%		D3B088              	100.00%
Bootstrap support for A8HVT9 as seed ortholog is 100%.
Bootstrap support for D3B088 as seed ortholog is 100%.

Group of orthologs #847. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 P.pallidum:198

A8JHC3              	100.00%		D3AW89              	100.00%
Bootstrap support for A8JHC3 as seed ortholog is 100%.
Bootstrap support for D3AW89 as seed ortholog is 100%.

Group of orthologs #848. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 P.pallidum:198

Q8H6H9              	100.00%		D3AWE7              	100.00%
Bootstrap support for Q8H6H9 as seed ortholog is 100%.
Bootstrap support for D3AWE7 as seed ortholog is 100%.

Group of orthologs #849. Best score 197 bits
Score difference with first non-orthologous sequence - C.reinhardtii:197 P.pallidum:197

A8J3B2              	100.00%		D3BM71              	100.00%
                    	       		D3B665              	34.28%
                    	       		D3BT74              	31.96%
                    	       		D3BT94              	31.44%
                    	       		D3AY26              	18.56%
Bootstrap support for A8J3B2 as seed ortholog is 100%.
Bootstrap support for D3BM71 as seed ortholog is 100%.

Group of orthologs #850. Best score 197 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.pallidum:16

A8I1T0              	100.00%		D3B457              	100.00%
                    	       		D3BNQ4              	10.81%
Bootstrap support for A8I1T0 as seed ortholog is 99%.
Bootstrap support for D3B457 as seed ortholog is 65%.
Alternative seed ortholog is D3BJJ6 (16 bits away from this cluster)

Group of orthologs #851. Best score 197 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 P.pallidum:197

A8J846              	100.00%		D3BAT4              	100.00%
Bootstrap support for A8J846 as seed ortholog is 100%.
Bootstrap support for D3BAT4 as seed ortholog is 100%.

Group of orthologs #852. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 P.pallidum:196

A8JB12              	100.00%		D3B3L9              	100.00%
A7UCH9              	28.96%		
Bootstrap support for A8JB12 as seed ortholog is 99%.
Bootstrap support for D3B3L9 as seed ortholog is 100%.

Group of orthologs #853. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 P.pallidum:196

A8IMK5              	100.00%		D3BKJ2              	100.00%
Bootstrap support for A8IMK5 as seed ortholog is 100%.
Bootstrap support for D3BKJ2 as seed ortholog is 100%.

Group of orthologs #854. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 P.pallidum:195

A8HVV2              	100.00%		D3B3R7              	100.00%
Bootstrap support for A8HVV2 as seed ortholog is 100%.
Bootstrap support for D3B3R7 as seed ortholog is 100%.

Group of orthologs #855. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 P.pallidum:195

A8I7Y8              	100.00%		D3B3B6              	100.00%
Bootstrap support for A8I7Y8 as seed ortholog is 100%.
Bootstrap support for D3B3B6 as seed ortholog is 100%.

Group of orthologs #856. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.pallidum:195

A8HYT0              	100.00%		D3BMU4              	100.00%
Bootstrap support for A8HYT0 as seed ortholog is 96%.
Bootstrap support for D3BMU4 as seed ortholog is 100%.

Group of orthologs #857. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 P.pallidum:195

A8I2T0              	100.00%		D3BTU3              	100.00%
Bootstrap support for A8I2T0 as seed ortholog is 100%.
Bootstrap support for D3BTU3 as seed ortholog is 100%.

Group of orthologs #858. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 P.pallidum:195

A8IRR6              	100.00%		D3BNY3              	100.00%
Bootstrap support for A8IRR6 as seed ortholog is 100%.
Bootstrap support for D3BNY3 as seed ortholog is 100%.

Group of orthologs #859. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 P.pallidum:195

A8IRY5              	100.00%		D3BVI7              	100.00%
Bootstrap support for A8IRY5 as seed ortholog is 64%.
Alternative seed ortholog is A8J4L8 (20 bits away from this cluster)
Bootstrap support for D3BVI7 as seed ortholog is 100%.

Group of orthologs #860. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 P.pallidum:89

A8HMJ9              	100.00%		D3AW66              	100.00%
Bootstrap support for A8HMJ9 as seed ortholog is 100%.
Bootstrap support for D3AW66 as seed ortholog is 97%.

Group of orthologs #861. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 P.pallidum:194

A8I0G0              	100.00%		D3B224              	100.00%
Bootstrap support for A8I0G0 as seed ortholog is 100%.
Bootstrap support for D3B224 as seed ortholog is 100%.

Group of orthologs #862. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 P.pallidum:194

A8I320              	100.00%		D3B5F4              	100.00%
Bootstrap support for A8I320 as seed ortholog is 100%.
Bootstrap support for D3B5F4 as seed ortholog is 100%.

Group of orthologs #863. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.pallidum:63

A8JGY3              	100.00%		D3AY59              	100.00%
Bootstrap support for A8JGY3 as seed ortholog is 95%.
Bootstrap support for D3AY59 as seed ortholog is 98%.

Group of orthologs #864. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 P.pallidum:193

A8IUN8              	100.00%		D3AYA8              	100.00%
Bootstrap support for A8IUN8 as seed ortholog is 100%.
Bootstrap support for D3AYA8 as seed ortholog is 100%.

Group of orthologs #865. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 P.pallidum:193

A8IJ00              	100.00%		D3B465              	100.00%
Bootstrap support for A8IJ00 as seed ortholog is 100%.
Bootstrap support for D3B465 as seed ortholog is 100%.

Group of orthologs #866. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 P.pallidum:193

A8HQ22              	100.00%		D3BIP2              	100.00%
Bootstrap support for A8HQ22 as seed ortholog is 100%.
Bootstrap support for D3BIP2 as seed ortholog is 100%.

Group of orthologs #867. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 P.pallidum:193

A8J1P1              	100.00%		D3AY99              	100.00%
Bootstrap support for A8J1P1 as seed ortholog is 100%.
Bootstrap support for D3AY99 as seed ortholog is 100%.

Group of orthologs #868. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:193 P.pallidum:193

Q5K1Y0              	100.00%		D3AYZ5              	100.00%
Bootstrap support for Q5K1Y0 as seed ortholog is 100%.
Bootstrap support for D3AYZ5 as seed ortholog is 100%.

Group of orthologs #869. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:25 P.pallidum:85

A8J924              	100.00%		D3BDR5              	100.00%
Bootstrap support for A8J924 as seed ortholog is 83%.
Bootstrap support for D3BDR5 as seed ortholog is 99%.

Group of orthologs #870. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 P.pallidum:11

A8HQN4              	100.00%		D3AYV5              	100.00%
Bootstrap support for A8HQN4 as seed ortholog is 99%.
Bootstrap support for D3AYV5 as seed ortholog is 60%.
Alternative seed ortholog is D3BRL5 (11 bits away from this cluster)

Group of orthologs #871. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:192 P.pallidum:192

A8JAA8              	100.00%		D3B544              	100.00%
Bootstrap support for A8JAA8 as seed ortholog is 100%.
Bootstrap support for D3B544 as seed ortholog is 100%.

Group of orthologs #872. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 P.pallidum:51

A8IIQ2              	100.00%		D3BR25              	100.00%
Bootstrap support for A8IIQ2 as seed ortholog is 87%.
Bootstrap support for D3BR25 as seed ortholog is 90%.

Group of orthologs #873. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:192 P.pallidum:192

A8J805              	100.00%		D3BQV7              	100.00%
Bootstrap support for A8J805 as seed ortholog is 100%.
Bootstrap support for D3BQV7 as seed ortholog is 100%.

Group of orthologs #874. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 P.pallidum:191

A8HN50              	100.00%		D3B5J6              	100.00%
Bootstrap support for A8HN50 as seed ortholog is 100%.
Bootstrap support for D3B5J6 as seed ortholog is 100%.

Group of orthologs #875. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 P.pallidum:191

A8IWP9              	100.00%		D3AZB1              	100.00%
Bootstrap support for A8IWP9 as seed ortholog is 100%.
Bootstrap support for D3AZB1 as seed ortholog is 100%.

Group of orthologs #876. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 P.pallidum:191

A8HP79              	100.00%		D3BHL7              	100.00%
Bootstrap support for A8HP79 as seed ortholog is 100%.
Bootstrap support for D3BHL7 as seed ortholog is 100%.

Group of orthologs #877. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 P.pallidum:59

A8I0Q7              	100.00%		D3BI43              	100.00%
Bootstrap support for A8I0Q7 as seed ortholog is 100%.
Bootstrap support for D3BI43 as seed ortholog is 96%.

Group of orthologs #878. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 P.pallidum:191

A8IZ68              	100.00%		D3B5F9              	100.00%
Bootstrap support for A8IZ68 as seed ortholog is 100%.
Bootstrap support for D3B5F9 as seed ortholog is 100%.

Group of orthologs #879. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 P.pallidum:191

A8HYM2              	100.00%		D3BMJ9              	100.00%
Bootstrap support for A8HYM2 as seed ortholog is 100%.
Bootstrap support for D3BMJ9 as seed ortholog is 100%.

Group of orthologs #880. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 P.pallidum:191

A8J8U1              	100.00%		D3B1A8              	100.00%
Bootstrap support for A8J8U1 as seed ortholog is 100%.
Bootstrap support for D3B1A8 as seed ortholog is 100%.

Group of orthologs #881. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 P.pallidum:191

A8IEU2              	100.00%		D3BMJ3              	100.00%
Bootstrap support for A8IEU2 as seed ortholog is 100%.
Bootstrap support for D3BMJ3 as seed ortholog is 100%.

Group of orthologs #882. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 P.pallidum:191

A8JCI7              	100.00%		D3B499              	100.00%
Bootstrap support for A8JCI7 as seed ortholog is 100%.
Bootstrap support for D3B499 as seed ortholog is 100%.

Group of orthologs #883. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 P.pallidum:191

A8J3V8              	100.00%		D3BMC8              	100.00%
Bootstrap support for A8J3V8 as seed ortholog is 100%.
Bootstrap support for D3BMC8 as seed ortholog is 100%.

Group of orthologs #884. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:30 P.pallidum:190

A8IR95              	100.00%		D3BJS5              	100.00%
A8JDK3              	20.76%		D3BKR1              	35.59%
A8IQQ8              	17.03%		
A8IBX2              	14.42%		
A8HUL8              	13.92%		
A8J0L8              	13.22%		
A8JG61              	11.55%		
A8J4C7              	11.05%		
A8J4C9              	9.27%		
A8I6V5              	8.79%		
A8JA33              	8.29%		
Bootstrap support for A8IR95 as seed ortholog is 71%.
Alternative seed ortholog is A8IBK5 (30 bits away from this cluster)
Bootstrap support for D3BJS5 as seed ortholog is 100%.

Group of orthologs #885. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.pallidum:134

A8IUI1              	100.00%		D3BG57              	100.00%
A8IX35              	8.67%		D3B8N8              	32.01%
A8IX47              	6.36%		D3BV73              	19.75%
Bootstrap support for A8IUI1 as seed ortholog is 99%.
Bootstrap support for D3BG57 as seed ortholog is 99%.

Group of orthologs #886. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.pallidum:190

A8J212              	100.00%		D3AZF9              	100.00%
Bootstrap support for A8J212 as seed ortholog is 100%.
Bootstrap support for D3AZF9 as seed ortholog is 100%.

Group of orthologs #887. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 P.pallidum:190

A8IWB5              	100.00%		D3B4H4              	100.00%
Bootstrap support for A8IWB5 as seed ortholog is 100%.
Bootstrap support for D3B4H4 as seed ortholog is 100%.

Group of orthologs #888. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 P.pallidum:190

A8I762              	100.00%		D3BLA0              	100.00%
Bootstrap support for A8I762 as seed ortholog is 99%.
Bootstrap support for D3BLA0 as seed ortholog is 100%.

Group of orthologs #889. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 P.pallidum:190

A8IHG8              	100.00%		D3BPC0              	100.00%
Bootstrap support for A8IHG8 as seed ortholog is 100%.
Bootstrap support for D3BPC0 as seed ortholog is 100%.

Group of orthologs #890. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 P.pallidum:190

A8IM89              	100.00%		D3BMU1              	100.00%
Bootstrap support for A8IM89 as seed ortholog is 100%.
Bootstrap support for D3BMU1 as seed ortholog is 100%.

Group of orthologs #891. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 P.pallidum:190

A8JFS8              	100.00%		D3BQQ5              	100.00%
Bootstrap support for A8JFS8 as seed ortholog is 100%.
Bootstrap support for D3BQQ5 as seed ortholog is 100%.

Group of orthologs #892. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 P.pallidum:18

A8J9H8              	100.00%		D3BJU6              	100.00%
A8JH12              	22.69%		
Bootstrap support for A8J9H8 as seed ortholog is 100%.
Bootstrap support for D3BJU6 as seed ortholog is 81%.

Group of orthologs #893. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 P.pallidum:189

A8I4H4              	100.00%		D3B6S2              	100.00%
Bootstrap support for A8I4H4 as seed ortholog is 100%.
Bootstrap support for D3B6S2 as seed ortholog is 100%.

Group of orthologs #894. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 P.pallidum:189

A8HSU7              	100.00%		D3BHJ3              	100.00%
Bootstrap support for A8HSU7 as seed ortholog is 100%.
Bootstrap support for D3BHJ3 as seed ortholog is 100%.

Group of orthologs #895. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 P.pallidum:189

A8IVU0              	100.00%		D3B4A0              	100.00%
Bootstrap support for A8IVU0 as seed ortholog is 100%.
Bootstrap support for D3B4A0 as seed ortholog is 100%.

Group of orthologs #896. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 P.pallidum:189

A8J2D5              	100.00%		D3B8X3              	100.00%
Bootstrap support for A8J2D5 as seed ortholog is 100%.
Bootstrap support for D3B8X3 as seed ortholog is 100%.

Group of orthologs #897. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 P.pallidum:189

Q944M9              	100.00%		D3BKX3              	100.00%
Bootstrap support for Q944M9 as seed ortholog is 100%.
Bootstrap support for D3BKX3 as seed ortholog is 100%.

Group of orthologs #898. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 P.pallidum:188

A8JAR0              	100.00%		D3BSZ4              	100.00%
A8JAQ8              	41.74%		
Bootstrap support for A8JAR0 as seed ortholog is 99%.
Bootstrap support for D3BSZ4 as seed ortholog is 100%.

Group of orthologs #899. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 P.pallidum:68

A8ICX5              	100.00%		D3AXW3              	100.00%
Bootstrap support for A8ICX5 as seed ortholog is 100%.
Bootstrap support for D3AXW3 as seed ortholog is 97%.

Group of orthologs #900. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 P.pallidum:188

A8J9A9              	100.00%		D3B645              	100.00%
Bootstrap support for A8J9A9 as seed ortholog is 100%.
Bootstrap support for D3B645 as seed ortholog is 100%.

Group of orthologs #901. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.pallidum:4

A8JEV0              	100.00%		D3B8B5              	100.00%
Bootstrap support for A8JEV0 as seed ortholog is 99%.
Bootstrap support for D3B8B5 as seed ortholog is 42%.
Alternative seed ortholog is D3B747 (4 bits away from this cluster)

Group of orthologs #902. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 P.pallidum:187

A8I5X1              	100.00%		D3BAC6              	100.00%
Bootstrap support for A8I5X1 as seed ortholog is 100%.
Bootstrap support for D3BAC6 as seed ortholog is 100%.

Group of orthologs #903. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 P.pallidum:187

A8ITV6              	100.00%		D3B1Q0              	100.00%
Bootstrap support for A8ITV6 as seed ortholog is 100%.
Bootstrap support for D3B1Q0 as seed ortholog is 100%.

Group of orthologs #904. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 P.pallidum:187

A8ITT6              	100.00%		D3BGB8              	100.00%
Bootstrap support for A8ITT6 as seed ortholog is 100%.
Bootstrap support for D3BGB8 as seed ortholog is 100%.

Group of orthologs #905. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.pallidum:187

A8JA29              	100.00%		D3BAC0              	100.00%
Bootstrap support for A8JA29 as seed ortholog is 88%.
Bootstrap support for D3BAC0 as seed ortholog is 100%.

Group of orthologs #906. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.pallidum:52

A8JHW4              	100.00%		D3BFJ1              	100.00%
Bootstrap support for A8JHW4 as seed ortholog is 99%.
Bootstrap support for D3BFJ1 as seed ortholog is 96%.

Group of orthologs #907. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.pallidum:80

A8J856              	100.00%		D3BQS8              	100.00%
Bootstrap support for A8J856 as seed ortholog is 99%.
Bootstrap support for D3BQS8 as seed ortholog is 99%.

Group of orthologs #908. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:34 P.pallidum:186

A8I730              	100.00%		D3BDE2              	100.00%
                    	       		D3BDD5              	22.88%
Bootstrap support for A8I730 as seed ortholog is 74%.
Alternative seed ortholog is A8JHF0 (34 bits away from this cluster)
Bootstrap support for D3BDE2 as seed ortholog is 100%.

Group of orthologs #909. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 P.pallidum:186

A8J591              	100.00%		D3B734              	100.00%
Bootstrap support for A8J591 as seed ortholog is 100%.
Bootstrap support for D3B734 as seed ortholog is 100%.

Group of orthologs #910. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 P.pallidum:186

A8J804              	100.00%		D3BVL2              	100.00%
Bootstrap support for A8J804 as seed ortholog is 100%.
Bootstrap support for D3BVL2 as seed ortholog is 100%.

Group of orthologs #911. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.pallidum:1

A8IYA3              	100.00%		D3BJU4              	100.00%
                    	       		D3BAU0              	26.62%
Bootstrap support for A8IYA3 as seed ortholog is 99%.
Bootstrap support for D3BJU4 as seed ortholog is 49%.
Alternative seed ortholog is D3BQ39 (1 bits away from this cluster)

Group of orthologs #912. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:31 P.pallidum:185

A8IZ70              	100.00%		D3BVG1              	100.00%
Bootstrap support for A8IZ70 as seed ortholog is 85%.
Bootstrap support for D3BVG1 as seed ortholog is 100%.

Group of orthologs #913. Best score 184 bits
Score difference with first non-orthologous sequence - C.reinhardtii:184 P.pallidum:184

A8IMT5              	100.00%		D3B3U3              	100.00%
Bootstrap support for A8IMT5 as seed ortholog is 100%.
Bootstrap support for D3B3U3 as seed ortholog is 100%.

Group of orthologs #914. Best score 184 bits
Score difference with first non-orthologous sequence - C.reinhardtii:184 P.pallidum:184

A8IJ79              	100.00%		D3B7B4              	100.00%
Bootstrap support for A8IJ79 as seed ortholog is 100%.
Bootstrap support for D3B7B4 as seed ortholog is 100%.

Group of orthologs #915. Best score 184 bits
Score difference with first non-orthologous sequence - C.reinhardtii:184 P.pallidum:97

A8I7J8              	100.00%		D3BPE3              	100.00%
Bootstrap support for A8I7J8 as seed ortholog is 100%.
Bootstrap support for D3BPE3 as seed ortholog is 100%.

Group of orthologs #916. Best score 184 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.pallidum:184

A8J901              	100.00%		D3BM60              	100.00%
Bootstrap support for A8J901 as seed ortholog is 91%.
Bootstrap support for D3BM60 as seed ortholog is 100%.

Group of orthologs #917. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 P.pallidum:183

A8HXZ5              	100.00%		D3B6L1              	100.00%
Bootstrap support for A8HXZ5 as seed ortholog is 100%.
Bootstrap support for D3B6L1 as seed ortholog is 100%.

Group of orthologs #918. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 P.pallidum:183

A8IKZ2              	100.00%		D3BBP3              	100.00%
Bootstrap support for A8IKZ2 as seed ortholog is 100%.
Bootstrap support for D3BBP3 as seed ortholog is 100%.

Group of orthologs #919. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 P.pallidum:183

A8J4K2              	100.00%		D3BC43              	100.00%
Bootstrap support for A8J4K2 as seed ortholog is 93%.
Bootstrap support for D3BC43 as seed ortholog is 100%.

Group of orthologs #920. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 P.pallidum:183

A8J304              	100.00%		D3BKU3              	100.00%
Bootstrap support for A8J304 as seed ortholog is 100%.
Bootstrap support for D3BKU3 as seed ortholog is 100%.

Group of orthologs #921. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 P.pallidum:183

Q6V506              	100.00%		D3BP95              	100.00%
Bootstrap support for Q6V506 as seed ortholog is 100%.
Bootstrap support for D3BP95 as seed ortholog is 100%.

Group of orthologs #922. Best score 182 bits
Score difference with first non-orthologous sequence - C.reinhardtii:182 P.pallidum:182

A8I243              	100.00%		D3AZY2              	100.00%
Bootstrap support for A8I243 as seed ortholog is 100%.
Bootstrap support for D3AZY2 as seed ortholog is 100%.

Group of orthologs #923. Best score 182 bits
Score difference with first non-orthologous sequence - C.reinhardtii:182 P.pallidum:182

A8I6U6              	100.00%		D3BP48              	100.00%
Bootstrap support for A8I6U6 as seed ortholog is 100%.
Bootstrap support for D3BP48 as seed ortholog is 100%.

Group of orthologs #924. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:39 P.pallidum:181

A8I6W1              	100.00%		D3B3Z5              	100.00%
Bootstrap support for A8I6W1 as seed ortholog is 77%.
Bootstrap support for D3B3Z5 as seed ortholog is 100%.

Group of orthologs #925. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 P.pallidum:181

A8J3E3              	100.00%		D3B6T1              	100.00%
Bootstrap support for A8J3E3 as seed ortholog is 100%.
Bootstrap support for D3B6T1 as seed ortholog is 100%.

Group of orthologs #926. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 P.pallidum:181

A8J1G8              	100.00%		D3BFQ0              	100.00%
Bootstrap support for A8J1G8 as seed ortholog is 100%.
Bootstrap support for D3BFQ0 as seed ortholog is 100%.

Group of orthologs #927. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.pallidum:181

A8JHR3              	100.00%		D3B238              	100.00%
Bootstrap support for A8JHR3 as seed ortholog is 98%.
Bootstrap support for D3B238 as seed ortholog is 100%.

Group of orthologs #928. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.pallidum:180

A8J8V0              	100.00%		D3BNA9              	100.00%
                    	       		D3BTR9              	29.07%
                    	       		D3BF54              	20.27%
                    	       		D3BEV2              	12.29%
                    	       		D3BEV3              	7.64%
Bootstrap support for A8J8V0 as seed ortholog is 91%.
Bootstrap support for D3BNA9 as seed ortholog is 100%.

Group of orthologs #929. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 P.pallidum:92

A8HST2              	100.00%		D3B3F5              	100.00%
Bootstrap support for A8HST2 as seed ortholog is 100%.
Bootstrap support for D3B3F5 as seed ortholog is 98%.

Group of orthologs #930. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 P.pallidum:180

A8HYT4              	100.00%		D3B9T4              	100.00%
Bootstrap support for A8HYT4 as seed ortholog is 100%.
Bootstrap support for D3B9T4 as seed ortholog is 100%.

Group of orthologs #931. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 P.pallidum:180

A8J0V7              	100.00%		D3B2Q4              	100.00%
Bootstrap support for A8J0V7 as seed ortholog is 100%.
Bootstrap support for D3B2Q4 as seed ortholog is 100%.

Group of orthologs #932. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 P.pallidum:180

A8I1Q7              	100.00%		D3BIZ7              	100.00%
Bootstrap support for A8I1Q7 as seed ortholog is 100%.
Bootstrap support for D3BIZ7 as seed ortholog is 100%.

Group of orthologs #933. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 P.pallidum:180

A8J588              	100.00%		D3B6L2              	100.00%
Bootstrap support for A8J588 as seed ortholog is 100%.
Bootstrap support for D3B6L2 as seed ortholog is 100%.

Group of orthologs #934. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 P.pallidum:180

A8J3R6              	100.00%		D3BNN1              	100.00%
Bootstrap support for A8J3R6 as seed ortholog is 100%.
Bootstrap support for D3BNN1 as seed ortholog is 100%.

Group of orthologs #935. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 P.pallidum:179

A8JGT3              	100.00%		D3B5E3              	100.00%
                    	       		D3BSB5              	36.46%
Bootstrap support for A8JGT3 as seed ortholog is 99%.
Bootstrap support for D3B5E3 as seed ortholog is 100%.

Group of orthologs #936. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:34 P.pallidum:179

A8HP81              	100.00%		D3BH30              	100.00%
Bootstrap support for A8HP81 as seed ortholog is 87%.
Bootstrap support for D3BH30 as seed ortholog is 100%.

Group of orthologs #937. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 P.pallidum:179

A8J5M9              	100.00%		D3BQN4              	100.00%
Bootstrap support for A8J5M9 as seed ortholog is 100%.
Bootstrap support for D3BQN4 as seed ortholog is 100%.

Group of orthologs #938. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 P.pallidum:179

A8JGY2              	100.00%		D3BU79              	100.00%
Bootstrap support for A8JGY2 as seed ortholog is 100%.
Bootstrap support for D3BU79 as seed ortholog is 100%.

Group of orthologs #939. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 P.pallidum:2

A8IX73              	100.00%		D3B4H8              	100.00%
                    	       		D3BHC7              	27.05%
                    	       		D3BVF7              	14.71%
Bootstrap support for A8IX73 as seed ortholog is 100%.
Bootstrap support for D3B4H8 as seed ortholog is 50%.
Alternative seed ortholog is D3BQB6 (2 bits away from this cluster)

Group of orthologs #940. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 P.pallidum:44

A8JHB7              	100.00%		D3BJZ1              	100.00%
                    	       		D3BH57              	39.62%
Bootstrap support for A8JHB7 as seed ortholog is 100%.
Bootstrap support for D3BJZ1 as seed ortholog is 81%.

Group of orthologs #941. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 P.pallidum:178

A8HS59              	100.00%		D3BQU5              	100.00%
Bootstrap support for A8HS59 as seed ortholog is 100%.
Bootstrap support for D3BQU5 as seed ortholog is 100%.

Group of orthologs #942. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 P.pallidum:105

A8JC37              	100.00%		D3B554              	100.00%
Bootstrap support for A8JC37 as seed ortholog is 98%.
Bootstrap support for D3B554 as seed ortholog is 99%.

Group of orthologs #943. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 P.pallidum:178

A8JFC3              	100.00%		D3B7M3              	100.00%
Bootstrap support for A8JFC3 as seed ortholog is 100%.
Bootstrap support for D3B7M3 as seed ortholog is 100%.

Group of orthologs #944. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.pallidum:178

A8J9W0              	100.00%		D3BMX5              	100.00%
Bootstrap support for A8J9W0 as seed ortholog is 100%.
Bootstrap support for D3BMX5 as seed ortholog is 100%.

Group of orthologs #945. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:177 P.pallidum:58

A8JHJ0              	100.00%		D3B1S8              	100.00%
A8I5J0              	8.41%		
A8HZN7              	5.50%		
Bootstrap support for A8JHJ0 as seed ortholog is 100%.
Bootstrap support for D3B1S8 as seed ortholog is 97%.

Group of orthologs #946. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:177 P.pallidum:177

A8JAS9              	100.00%		D3B2U9              	100.00%
Bootstrap support for A8JAS9 as seed ortholog is 100%.
Bootstrap support for D3B2U9 as seed ortholog is 100%.

Group of orthologs #947. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:177 P.pallidum:177

A8JH29              	100.00%		D3BSM2              	100.00%
Bootstrap support for A8JH29 as seed ortholog is 100%.
Bootstrap support for D3BSM2 as seed ortholog is 100%.

Group of orthologs #948. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:31 P.pallidum:6

A8J7A7              	100.00%		D3BAY1              	100.00%
A8J947              	26.72%		
Bootstrap support for A8J7A7 as seed ortholog is 88%.
Bootstrap support for D3BAY1 as seed ortholog is 61%.
Alternative seed ortholog is D3BN54 (6 bits away from this cluster)

Group of orthologs #949. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.pallidum:176

A8HPX6              	100.00%		D3AXK2              	100.00%
Bootstrap support for A8HPX6 as seed ortholog is 92%.
Bootstrap support for D3AXK2 as seed ortholog is 100%.

Group of orthologs #950. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 P.pallidum:176

A8IEP3              	100.00%		D3BFX3              	100.00%
Bootstrap support for A8IEP3 as seed ortholog is 100%.
Bootstrap support for D3BFX3 as seed ortholog is 100%.

Group of orthologs #951. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 P.pallidum:176

A8JFQ2              	100.00%		D3BL88              	100.00%
Bootstrap support for A8JFQ2 as seed ortholog is 100%.
Bootstrap support for D3BL88 as seed ortholog is 100%.

Group of orthologs #952. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 P.pallidum:175

A8HNP9              	100.00%		D3B3G8              	100.00%
Bootstrap support for A8HNP9 as seed ortholog is 100%.
Bootstrap support for D3B3G8 as seed ortholog is 100%.

Group of orthologs #953. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 P.pallidum:175

A8J3X9              	100.00%		D3B439              	100.00%
Bootstrap support for A8J3X9 as seed ortholog is 100%.
Bootstrap support for D3B439 as seed ortholog is 100%.

Group of orthologs #954. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 P.pallidum:175

A8I5H6              	100.00%		D3BMX0              	100.00%
Bootstrap support for A8I5H6 as seed ortholog is 100%.
Bootstrap support for D3BMX0 as seed ortholog is 100%.

Group of orthologs #955. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 P.pallidum:21

A8JFX7              	100.00%		D3B3Q3              	100.00%
Bootstrap support for A8JFX7 as seed ortholog is 100%.
Bootstrap support for D3B3Q3 as seed ortholog is 78%.

Group of orthologs #956. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 P.pallidum:175

A8JCS3              	100.00%		D3B790              	100.00%
Bootstrap support for A8JCS3 as seed ortholog is 100%.
Bootstrap support for D3B790 as seed ortholog is 100%.

Group of orthologs #957. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 P.pallidum:48

A8J339              	100.00%		D3BGD2              	100.00%
Bootstrap support for A8J339 as seed ortholog is 100%.
Bootstrap support for D3BGD2 as seed ortholog is 85%.

Group of orthologs #958. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 P.pallidum:175

A8J3D7              	100.00%		D3BI23              	100.00%
Bootstrap support for A8J3D7 as seed ortholog is 100%.
Bootstrap support for D3BI23 as seed ortholog is 100%.

Group of orthologs #959. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.pallidum:57

A8JBR9              	100.00%		D3BI29              	100.00%
Bootstrap support for A8JBR9 as seed ortholog is 99%.
Bootstrap support for D3BI29 as seed ortholog is 98%.

Group of orthologs #960. Best score 174 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 P.pallidum:174

A8HW46              	100.00%		D3BQ91              	100.00%
Bootstrap support for A8HW46 as seed ortholog is 100%.
Bootstrap support for D3BQ91 as seed ortholog is 100%.

Group of orthologs #961. Best score 174 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 P.pallidum:174

A8IAM0              	100.00%		D3BMF6              	100.00%
Bootstrap support for A8IAM0 as seed ortholog is 100%.
Bootstrap support for D3BMF6 as seed ortholog is 100%.

Group of orthologs #962. Best score 174 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 P.pallidum:27

A8IA03              	100.00%		D3BUT4              	100.00%
Bootstrap support for A8IA03 as seed ortholog is 89%.
Bootstrap support for D3BUT4 as seed ortholog is 81%.

Group of orthologs #963. Best score 174 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 P.pallidum:174

A8IG64              	100.00%		D3BUN5              	100.00%
Bootstrap support for A8IG64 as seed ortholog is 100%.
Bootstrap support for D3BUN5 as seed ortholog is 100%.

Group of orthologs #964. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:173 P.pallidum:173

A8IZP4              	100.00%		D3BEA1              	100.00%
                    	       		D3BQ63              	5.30%
Bootstrap support for A8IZP4 as seed ortholog is 100%.
Bootstrap support for D3BEA1 as seed ortholog is 100%.

Group of orthologs #965. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:173 P.pallidum:173

A8HW43              	100.00%		D3BKP9              	100.00%
Bootstrap support for A8HW43 as seed ortholog is 100%.
Bootstrap support for D3BKP9 as seed ortholog is 100%.

Group of orthologs #966. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.pallidum:173

A8IS57              	100.00%		D3BKT0              	100.00%
Bootstrap support for A8IS57 as seed ortholog is 97%.
Bootstrap support for D3BKT0 as seed ortholog is 100%.

Group of orthologs #967. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:172 P.pallidum:53

Q6U9W9              	100.00%		D3BHG8              	100.00%
                    	       		D3BS60              	7.98%
Bootstrap support for Q6U9W9 as seed ortholog is 100%.
Bootstrap support for D3BHG8 as seed ortholog is 89%.

Group of orthologs #968. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:6 P.pallidum:67

A8IJF1              	100.00%		D3B3I5              	100.00%
Bootstrap support for A8IJF1 as seed ortholog is 59%.
Alternative seed ortholog is A8I469 (6 bits away from this cluster)
Bootstrap support for D3B3I5 as seed ortholog is 98%.

Group of orthologs #969. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:172 P.pallidum:172

A8J1B8              	100.00%		D3AW96              	100.00%
Bootstrap support for A8J1B8 as seed ortholog is 100%.
Bootstrap support for D3AW96 as seed ortholog is 100%.

Group of orthologs #970. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 P.pallidum:118

A8IYP2              	100.00%		D3BAX8              	100.00%
Bootstrap support for A8IYP2 as seed ortholog is 99%.
Bootstrap support for D3BAX8 as seed ortholog is 99%.

Group of orthologs #971. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:172 P.pallidum:172

A8IRU0              	100.00%		D3BFQ7              	100.00%
Bootstrap support for A8IRU0 as seed ortholog is 100%.
Bootstrap support for D3BFQ7 as seed ortholog is 100%.

Group of orthologs #972. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:172 P.pallidum:172

A8JHV3              	100.00%		D3AWH9              	100.00%
Bootstrap support for A8JHV3 as seed ortholog is 100%.
Bootstrap support for D3AWH9 as seed ortholog is 100%.

Group of orthologs #973. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:172 P.pallidum:172

A8JEE6              	100.00%		D3B1R4              	100.00%
Bootstrap support for A8JEE6 as seed ortholog is 100%.
Bootstrap support for D3B1R4 as seed ortholog is 100%.

Group of orthologs #974. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 P.pallidum:171

A8IRW9              	100.00%		D3B3D8              	100.00%
A8IRW7              	5.95%		
Bootstrap support for A8IRW9 as seed ortholog is 100%.
Bootstrap support for D3B3D8 as seed ortholog is 100%.

Group of orthologs #975. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 P.pallidum:171

A8IW47              	100.00%		D3AZD5              	100.00%
Bootstrap support for A8IW47 as seed ortholog is 100%.
Bootstrap support for D3AZD5 as seed ortholog is 100%.

Group of orthologs #976. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 P.pallidum:171

A8INA8              	100.00%		D3BL22              	100.00%
Bootstrap support for A8INA8 as seed ortholog is 99%.
Bootstrap support for D3BL22 as seed ortholog is 100%.

Group of orthologs #977. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 P.pallidum:171

A8JF38              	100.00%		D3BND0              	100.00%
Bootstrap support for A8JF38 as seed ortholog is 100%.
Bootstrap support for D3BND0 as seed ortholog is 100%.

Group of orthologs #978. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 P.pallidum:170

A8IYQ8              	100.00%		D3BCE9              	100.00%
Bootstrap support for A8IYQ8 as seed ortholog is 100%.
Bootstrap support for D3BCE9 as seed ortholog is 100%.

Group of orthologs #979. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 P.pallidum:170

A8IMZ0              	100.00%		D3BSS7              	100.00%
Bootstrap support for A8IMZ0 as seed ortholog is 99%.
Bootstrap support for D3BSS7 as seed ortholog is 100%.

Group of orthologs #980. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 P.pallidum:170

A8JBG7              	100.00%		D3BCB9              	100.00%
Bootstrap support for A8JBG7 as seed ortholog is 100%.
Bootstrap support for D3BCB9 as seed ortholog is 100%.

Group of orthologs #981. Best score 169 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 P.pallidum:169

A8HZ94              	100.00%		D3BGI1              	100.00%
                    	       		D3BSZ1              	18.99%
                    	       		D3B8C9              	14.51%
Bootstrap support for A8HZ94 as seed ortholog is 100%.
Bootstrap support for D3BGI1 as seed ortholog is 100%.

Group of orthologs #982. Best score 169 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 P.pallidum:169

A8I5J8              	100.00%		D3BSA4              	100.00%
A8I7X6              	26.36%		
Bootstrap support for A8I5J8 as seed ortholog is 100%.
Bootstrap support for D3BSA4 as seed ortholog is 100%.

Group of orthologs #983. Best score 169 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 P.pallidum:169

A8J9X6              	100.00%		D3B367              	100.00%
Bootstrap support for A8J9X6 as seed ortholog is 100%.
Bootstrap support for D3B367 as seed ortholog is 100%.

Group of orthologs #984. Best score 169 bits
Score difference with first non-orthologous sequence - C.reinhardtii:26 P.pallidum:169

A8JB79              	100.00%		D3BE16              	100.00%
Bootstrap support for A8JB79 as seed ortholog is 78%.
Bootstrap support for D3BE16 as seed ortholog is 100%.

Group of orthologs #985. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 P.pallidum:168

A8J7C5              	100.00%		D3BM80              	100.00%
A8J7C6              	48.18%		
A8J7C7              	27.52%		
Bootstrap support for A8J7C5 as seed ortholog is 100%.
Bootstrap support for D3BM80 as seed ortholog is 100%.

Group of orthologs #986. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 P.pallidum:168

A8HQE3              	100.00%		D3AXH6              	100.00%
Bootstrap support for A8HQE3 as seed ortholog is 100%.
Bootstrap support for D3AXH6 as seed ortholog is 100%.

Group of orthologs #987. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.pallidum:168

A8HPW6              	100.00%		D3AYW6              	100.00%
Bootstrap support for A8HPW6 as seed ortholog is 99%.
Bootstrap support for D3AYW6 as seed ortholog is 100%.

Group of orthologs #988. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 P.pallidum:168

A8HN61              	100.00%		D3B2G1              	100.00%
Bootstrap support for A8HN61 as seed ortholog is 100%.
Bootstrap support for D3B2G1 as seed ortholog is 100%.

Group of orthologs #989. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 P.pallidum:168

A8HSJ6              	100.00%		D3B3G5              	100.00%
Bootstrap support for A8HSJ6 as seed ortholog is 100%.
Bootstrap support for D3B3G5 as seed ortholog is 100%.

Group of orthologs #990. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 P.pallidum:168

A8ITR2              	100.00%		D3B496              	100.00%
Bootstrap support for A8ITR2 as seed ortholog is 100%.
Bootstrap support for D3B496 as seed ortholog is 100%.

Group of orthologs #991. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 P.pallidum:168

A8IZE1              	100.00%		D3B3C0              	100.00%
Bootstrap support for A8IZE1 as seed ortholog is 100%.
Bootstrap support for D3B3C0 as seed ortholog is 100%.

Group of orthologs #992. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.pallidum:77

A8I7J0              	100.00%		D3BHH6              	100.00%
Bootstrap support for A8I7J0 as seed ortholog is 100%.
Bootstrap support for D3BHH6 as seed ortholog is 99%.

Group of orthologs #993. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 P.pallidum:168

A8JAI8              	100.00%		D3BAH6              	100.00%
Bootstrap support for A8JAI8 as seed ortholog is 100%.
Bootstrap support for D3BAH6 as seed ortholog is 100%.

Group of orthologs #994. Best score 167 bits
Score difference with first non-orthologous sequence - C.reinhardtii:167 P.pallidum:167

A8IBL2              	100.00%		D3BPG4              	100.00%
Bootstrap support for A8IBL2 as seed ortholog is 100%.
Bootstrap support for D3BPG4 as seed ortholog is 100%.

Group of orthologs #995. Best score 167 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.pallidum:167

A8JGY1              	100.00%		D3B2U8              	100.00%
Bootstrap support for A8JGY1 as seed ortholog is 97%.
Bootstrap support for D3B2U8 as seed ortholog is 100%.

Group of orthologs #996. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.pallidum:74

A8IBI1              	100.00%		D3B9K9              	100.00%
Bootstrap support for A8IBI1 as seed ortholog is 99%.
Bootstrap support for D3B9K9 as seed ortholog is 99%.

Group of orthologs #997. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 P.pallidum:166

A8J493              	100.00%		D3B437              	100.00%
Bootstrap support for A8J493 as seed ortholog is 100%.
Bootstrap support for D3B437 as seed ortholog is 100%.

Group of orthologs #998. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.pallidum:166

A8J5J8              	100.00%		D3BGP9              	100.00%
Bootstrap support for A8J5J8 as seed ortholog is 70%.
Alternative seed ortholog is A8HPS0 (45 bits away from this cluster)
Bootstrap support for D3BGP9 as seed ortholog is 100%.

Group of orthologs #999. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 P.pallidum:32

A8JB85              	100.00%		D3BH99              	100.00%
Bootstrap support for A8JB85 as seed ortholog is 100%.
Bootstrap support for D3BH99 as seed ortholog is 95%.

Group of orthologs #1000. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 P.pallidum:166

A8JDZ9              	100.00%		D3BLV2              	100.00%
Bootstrap support for A8JDZ9 as seed ortholog is 100%.
Bootstrap support for D3BLV2 as seed ortholog is 100%.

Group of orthologs #1001. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.pallidum:166

A8JI92              	100.00%		D3BLM9              	100.00%
Bootstrap support for A8JI92 as seed ortholog is 89%.
Bootstrap support for D3BLM9 as seed ortholog is 100%.

Group of orthologs #1002. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 P.pallidum:166

A8JGE8              	100.00%		D3BNV1              	100.00%
Bootstrap support for A8JGE8 as seed ortholog is 100%.
Bootstrap support for D3BNV1 as seed ortholog is 100%.

Group of orthologs #1003. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 P.pallidum:165

A8JGI1              	100.00%		D3BBX5              	100.00%
                    	       		D3BT53              	41.01%
Bootstrap support for A8JGI1 as seed ortholog is 100%.
Bootstrap support for D3BBX5 as seed ortholog is 100%.

Group of orthologs #1004. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 P.pallidum:165

A8I0Q1              	100.00%		D3AW03              	100.00%
Bootstrap support for A8I0Q1 as seed ortholog is 100%.
Bootstrap support for D3AW03 as seed ortholog is 100%.

Group of orthologs #1005. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 P.pallidum:165

A8I297              	100.00%		D3BPP6              	100.00%
Bootstrap support for A8I297 as seed ortholog is 100%.
Bootstrap support for D3BPP6 as seed ortholog is 100%.

Group of orthologs #1006. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 P.pallidum:77

A8IIS4              	100.00%		D3BJW0              	100.00%
Bootstrap support for A8IIS4 as seed ortholog is 91%.
Bootstrap support for D3BJW0 as seed ortholog is 99%.

Group of orthologs #1007. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 P.pallidum:165

A8HUC0              	100.00%		D3BUS8              	100.00%
Bootstrap support for A8HUC0 as seed ortholog is 100%.
Bootstrap support for D3BUS8 as seed ortholog is 100%.

Group of orthologs #1008. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:8 P.pallidum:23

Q6UPR4              	100.00%		D3B128              	100.00%
Q8S3U7              	5.15%		D3AY23              	11.68%
                    	       		D3BBV0              	5.94%
Bootstrap support for Q6UPR4 as seed ortholog is 68%.
Alternative seed ortholog is A8JGJ4 (8 bits away from this cluster)
Bootstrap support for D3B128 as seed ortholog is 75%.

Group of orthologs #1009. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 P.pallidum:164

A8HRC0              	100.00%		D3AZU5              	100.00%
Bootstrap support for A8HRC0 as seed ortholog is 100%.
Bootstrap support for D3AZU5 as seed ortholog is 100%.

Group of orthologs #1010. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 P.pallidum:164

A8HVC8              	100.00%		D3BJM4              	100.00%
Bootstrap support for A8HVC8 as seed ortholog is 100%.
Bootstrap support for D3BJM4 as seed ortholog is 100%.

Group of orthologs #1011. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 P.pallidum:164

A8IF73              	100.00%		D3BPW7              	100.00%
Bootstrap support for A8IF73 as seed ortholog is 100%.
Bootstrap support for D3BPW7 as seed ortholog is 100%.

Group of orthologs #1012. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 P.pallidum:164

A8J956              	100.00%		D3BN92              	100.00%
Bootstrap support for A8J956 as seed ortholog is 100%.
Bootstrap support for D3BN92 as seed ortholog is 100%.

Group of orthologs #1013. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:24 P.pallidum:69

A8HZM9              	100.00%		D3BBA4              	100.00%
A8J0L0              	24.06%		
Bootstrap support for A8HZM9 as seed ortholog is 76%.
Bootstrap support for D3BBA4 as seed ortholog is 99%.

Group of orthologs #1014. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.pallidum:163

A8J0A1              	100.00%		D3BEZ0              	100.00%
A8IZB6              	5.93%		
Bootstrap support for A8J0A1 as seed ortholog is 99%.
Bootstrap support for D3BEZ0 as seed ortholog is 100%.

Group of orthologs #1015. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.pallidum:47

A8JBW3              	100.00%		D3BQ72              	100.00%
                    	       		D3B9K5              	27.93%
Bootstrap support for A8JBW3 as seed ortholog is 98%.
Bootstrap support for D3BQ72 as seed ortholog is 93%.

Group of orthologs #1016. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 P.pallidum:163

A8IUV7              	100.00%		D3AW01              	100.00%
Bootstrap support for A8IUV7 as seed ortholog is 100%.
Bootstrap support for D3AW01 as seed ortholog is 100%.

Group of orthologs #1017. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:34 P.pallidum:163

A8IR93              	100.00%		D3AYL6              	100.00%
Bootstrap support for A8IR93 as seed ortholog is 95%.
Bootstrap support for D3AYL6 as seed ortholog is 100%.

Group of orthologs #1018. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 P.pallidum:163

A8INC7              	100.00%		D3B2L5              	100.00%
Bootstrap support for A8INC7 as seed ortholog is 100%.
Bootstrap support for D3B2L5 as seed ortholog is 100%.

Group of orthologs #1019. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 P.pallidum:163

A8HNM2              	100.00%		D3BQW8              	100.00%
Bootstrap support for A8HNM2 as seed ortholog is 100%.
Bootstrap support for D3BQW8 as seed ortholog is 100%.

Group of orthologs #1020. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 P.pallidum:163

A8J6H8              	100.00%		D3B2S7              	100.00%
Bootstrap support for A8J6H8 as seed ortholog is 100%.
Bootstrap support for D3B2S7 as seed ortholog is 100%.

Group of orthologs #1021. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 P.pallidum:163

A8JD65              	100.00%		D3B0B4              	100.00%
Bootstrap support for A8JD65 as seed ortholog is 100%.
Bootstrap support for D3B0B4 as seed ortholog is 100%.

Group of orthologs #1022. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 P.pallidum:163

A8J349              	100.00%		D3BF31              	100.00%
Bootstrap support for A8J349 as seed ortholog is 100%.
Bootstrap support for D3BF31 as seed ortholog is 100%.

Group of orthologs #1023. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 P.pallidum:60

A8JGV4              	100.00%		D3BQQ0              	100.00%
                    	       		D3BQQ1              	53.30%
                    	       		D3BQP6              	43.77%
                    	       		D3BTG8              	22.00%
Bootstrap support for A8JGV4 as seed ortholog is 99%.
Bootstrap support for D3BQQ0 as seed ortholog is 96%.

Group of orthologs #1024. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 P.pallidum:162

A8I6N2              	100.00%		D3B662              	100.00%
A8I6N5              	25.26%		
A8I6N8              	16.61%		
Bootstrap support for A8I6N2 as seed ortholog is 100%.
Bootstrap support for D3B662 as seed ortholog is 100%.

Group of orthologs #1025. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 P.pallidum:162

A8ICF7              	100.00%		D3AYN0              	100.00%
Bootstrap support for A8ICF7 as seed ortholog is 100%.
Bootstrap support for D3AYN0 as seed ortholog is 100%.

Group of orthologs #1026. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 P.pallidum:162

A8ITX1              	100.00%		D3AZG0              	100.00%
Bootstrap support for A8ITX1 as seed ortholog is 100%.
Bootstrap support for D3AZG0 as seed ortholog is 100%.

Group of orthologs #1027. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 P.pallidum:162

A8IE61              	100.00%		D3B6M1              	100.00%
Bootstrap support for A8IE61 as seed ortholog is 100%.
Bootstrap support for D3B6M1 as seed ortholog is 100%.

Group of orthologs #1028. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 P.pallidum:162

A8IM30              	100.00%		D3B761              	100.00%
Bootstrap support for A8IM30 as seed ortholog is 100%.
Bootstrap support for D3B761 as seed ortholog is 100%.

Group of orthologs #1029. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 P.pallidum:162

A8I5B9              	100.00%		D3BPL5              	100.00%
Bootstrap support for A8I5B9 as seed ortholog is 100%.
Bootstrap support for D3BPL5 as seed ortholog is 100%.

Group of orthologs #1030. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 P.pallidum:161

A8I333              	100.00%		D3B677              	100.00%
A8J5E7              	23.48%		D3B1K0              	22.98%
Bootstrap support for A8I333 as seed ortholog is 100%.
Bootstrap support for D3B677 as seed ortholog is 100%.

Group of orthologs #1031. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 P.pallidum:161

A8I5Y2              	100.00%		D3B1K7              	100.00%
Bootstrap support for A8I5Y2 as seed ortholog is 100%.
Bootstrap support for D3B1K7 as seed ortholog is 100%.

Group of orthologs #1032. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:8 P.pallidum:161

A8HQT8              	100.00%		D3BPQ9              	100.00%
Bootstrap support for A8HQT8 as seed ortholog is 53%.
Alternative seed ortholog is A8J7F9 (8 bits away from this cluster)
Bootstrap support for D3BPQ9 as seed ortholog is 100%.

Group of orthologs #1033. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 P.pallidum:161

A8HSJ9              	100.00%		D3BU92              	100.00%
Bootstrap support for A8HSJ9 as seed ortholog is 100%.
Bootstrap support for D3BU92 as seed ortholog is 100%.

Group of orthologs #1034. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 P.pallidum:161

A8J6H6              	100.00%		D3BM06              	100.00%
Bootstrap support for A8J6H6 as seed ortholog is 100%.
Bootstrap support for D3BM06 as seed ortholog is 100%.

Group of orthologs #1035. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 P.pallidum:81

A8JGU0              	100.00%		D3BFC2              	100.00%
Bootstrap support for A8JGU0 as seed ortholog is 100%.
Bootstrap support for D3BFC2 as seed ortholog is 97%.

Group of orthologs #1036. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 P.pallidum:160

A8ICL2              	100.00%		D3BEB6              	100.00%
A8HRZ6              	5.32%		
Bootstrap support for A8ICL2 as seed ortholog is 100%.
Bootstrap support for D3BEB6 as seed ortholog is 100%.

Group of orthologs #1037. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 P.pallidum:93

A8HUY7              	100.00%		D3BB02              	100.00%
Bootstrap support for A8HUY7 as seed ortholog is 100%.
Bootstrap support for D3BB02 as seed ortholog is 99%.

Group of orthologs #1038. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 P.pallidum:160

A8J474              	100.00%		D3B636              	100.00%
Bootstrap support for A8J474 as seed ortholog is 100%.
Bootstrap support for D3B636 as seed ortholog is 100%.

Group of orthologs #1039. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 P.pallidum:160

A8J4I9              	100.00%		D3B7S1              	100.00%
Bootstrap support for A8J4I9 as seed ortholog is 100%.
Bootstrap support for D3B7S1 as seed ortholog is 100%.

Group of orthologs #1040. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 P.pallidum:45

A8IZV8              	100.00%		D3BU73              	100.00%
Bootstrap support for A8IZV8 as seed ortholog is 100%.
Bootstrap support for D3BU73 as seed ortholog is 98%.

Group of orthologs #1041. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 P.pallidum:159

A8IKI9              	100.00%		D3B7E4              	100.00%
Bootstrap support for A8IKI9 as seed ortholog is 100%.
Bootstrap support for D3B7E4 as seed ortholog is 100%.

Group of orthologs #1042. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 P.pallidum:24

A8J426              	100.00%		D3B8Y2              	100.00%
Bootstrap support for A8J426 as seed ortholog is 100%.
Bootstrap support for D3B8Y2 as seed ortholog is 66%.
Alternative seed ortholog is D3BBM2 (24 bits away from this cluster)

Group of orthologs #1043. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 P.pallidum:159

A8JDX0              	100.00%		D3BBS5              	100.00%
Bootstrap support for A8JDX0 as seed ortholog is 100%.
Bootstrap support for D3BBS5 as seed ortholog is 100%.

Group of orthologs #1044. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.pallidum:158

A8HQM1              	100.00%		D3B1Z1              	100.00%
Bootstrap support for A8HQM1 as seed ortholog is 98%.
Bootstrap support for D3B1Z1 as seed ortholog is 100%.

Group of orthologs #1045. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 P.pallidum:158

A8J1L5              	100.00%		D3B7P9              	100.00%
Bootstrap support for A8J1L5 as seed ortholog is 100%.
Bootstrap support for D3B7P9 as seed ortholog is 100%.

Group of orthologs #1046. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.pallidum:158

A8J7D5              	100.00%		D3BCC3              	100.00%
Bootstrap support for A8J7D5 as seed ortholog is 99%.
Bootstrap support for D3BCC3 as seed ortholog is 100%.

Group of orthologs #1047. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 P.pallidum:158

A8JDH3              	100.00%		D3B7E1              	100.00%
Bootstrap support for A8JDH3 as seed ortholog is 100%.
Bootstrap support for D3B7E1 as seed ortholog is 100%.

Group of orthologs #1048. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 P.pallidum:158

A8JGK1              	100.00%		D3BIR0              	100.00%
Bootstrap support for A8JGK1 as seed ortholog is 100%.
Bootstrap support for D3BIR0 as seed ortholog is 100%.

Group of orthologs #1049. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 P.pallidum:157

A8J2J5              	100.00%		D3BUI9              	100.00%
                    	       		D3BCF4              	16.31%
Bootstrap support for A8J2J5 as seed ortholog is 100%.
Bootstrap support for D3BUI9 as seed ortholog is 100%.

Group of orthologs #1050. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 P.pallidum:157

A8HWS3              	100.00%		D3B6T6              	100.00%
Bootstrap support for A8HWS3 as seed ortholog is 100%.
Bootstrap support for D3B6T6 as seed ortholog is 100%.

Group of orthologs #1051. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 P.pallidum:16

A8I6B9              	100.00%		D3BAQ8              	100.00%
Bootstrap support for A8I6B9 as seed ortholog is 94%.
Bootstrap support for D3BAQ8 as seed ortholog is 69%.
Alternative seed ortholog is D3BHM9 (16 bits away from this cluster)

Group of orthologs #1052. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 P.pallidum:157

A8IMY7              	100.00%		D3B803              	100.00%
Bootstrap support for A8IMY7 as seed ortholog is 100%.
Bootstrap support for D3B803 as seed ortholog is 100%.

Group of orthologs #1053. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 P.pallidum:26

A8J2G1              	100.00%		D3BCP8              	100.00%
Bootstrap support for A8J2G1 as seed ortholog is 100%.
Bootstrap support for D3BCP8 as seed ortholog is 85%.

Group of orthologs #1054. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 P.pallidum:157

A8JH26              	100.00%		D3BTP4              	100.00%
Bootstrap support for A8JH26 as seed ortholog is 100%.
Bootstrap support for D3BTP4 as seed ortholog is 100%.

Group of orthologs #1055. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 P.pallidum:56

A8J4N7              	100.00%		D3BMB1              	100.00%
A8JBD8              	6.71%		
Bootstrap support for A8J4N7 as seed ortholog is 69%.
Alternative seed ortholog is A8J587 (3 bits away from this cluster)
Bootstrap support for D3BMB1 as seed ortholog is 74%.
Alternative seed ortholog is D3B4Y1 (56 bits away from this cluster)

Group of orthologs #1056. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 P.pallidum:156

A8IKL2              	100.00%		D3B266              	100.00%
Bootstrap support for A8IKL2 as seed ortholog is 100%.
Bootstrap support for D3B266 as seed ortholog is 100%.

Group of orthologs #1057. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 P.pallidum:156

A8J7L7              	100.00%		D3AWR4              	100.00%
Bootstrap support for A8J7L7 as seed ortholog is 100%.
Bootstrap support for D3AWR4 as seed ortholog is 100%.

Group of orthologs #1058. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:33 P.pallidum:61

A8J0I9              	100.00%		D3B3P3              	100.00%
Bootstrap support for A8J0I9 as seed ortholog is 80%.
Bootstrap support for D3B3P3 as seed ortholog is 96%.

Group of orthologs #1059. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 P.pallidum:156

A8J2W3              	100.00%		D3B1P5              	100.00%
Bootstrap support for A8J2W3 as seed ortholog is 100%.
Bootstrap support for D3B1P5 as seed ortholog is 100%.

Group of orthologs #1060. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 P.pallidum:156

A8J1W4              	100.00%		D3BLD3              	100.00%
Bootstrap support for A8J1W4 as seed ortholog is 100%.
Bootstrap support for D3BLD3 as seed ortholog is 100%.

Group of orthologs #1061. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 P.pallidum:155

A8HVA3              	100.00%		D3AWN6              	100.00%
A8HSB0              	98.04%		D3BIG9              	12.07%
A8JJH1              	82.35%		
A8J9L9              	78.43%		
A8JIN9              	76.47%		
A8JJE1              	60.78%		
Bootstrap support for A8HVA3 as seed ortholog is 98%.
Bootstrap support for D3AWN6 as seed ortholog is 100%.

Group of orthologs #1062. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 P.pallidum:155

A8IA37              	100.00%		D3B8Z2              	100.00%
                    	       		D3BQ49              	40.10%
                    	       		D3BLZ8              	33.53%
                    	       		D3BPD2              	12.64%
Bootstrap support for A8IA37 as seed ortholog is 100%.
Bootstrap support for D3B8Z2 as seed ortholog is 100%.

Group of orthologs #1063. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 P.pallidum:48

A8JHH3              	100.00%		D3B816              	100.00%
A8JHH4              	100.00%		D3BJC9              	15.38%
Bootstrap support for A8JHH3 as seed ortholog is 100%.
Bootstrap support for A8JHH4 as seed ortholog is 100%.
Bootstrap support for D3B816 as seed ortholog is 78%.

Group of orthologs #1064. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 P.pallidum:155

A8ICT1              	100.00%		D3AZM6              	100.00%
Bootstrap support for A8ICT1 as seed ortholog is 100%.
Bootstrap support for D3AZM6 as seed ortholog is 100%.

Group of orthologs #1065. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 P.pallidum:155

A8HM72              	100.00%		D3BR47              	100.00%
Bootstrap support for A8HM72 as seed ortholog is 100%.
Bootstrap support for D3BR47 as seed ortholog is 100%.

Group of orthologs #1066. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 P.pallidum:155

A8HYN9              	100.00%		D3BT12              	100.00%
Bootstrap support for A8HYN9 as seed ortholog is 99%.
Bootstrap support for D3BT12 as seed ortholog is 100%.

Group of orthologs #1067. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 P.pallidum:155

A8I6W9              	100.00%		D3BQC9              	100.00%
Bootstrap support for A8I6W9 as seed ortholog is 100%.
Bootstrap support for D3BQC9 as seed ortholog is 100%.

Group of orthologs #1068. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 P.pallidum:155

A8JF95              	100.00%		D3BGC3              	100.00%
Bootstrap support for A8JF95 as seed ortholog is 100%.
Bootstrap support for D3BGC3 as seed ortholog is 100%.

Group of orthologs #1069. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 P.pallidum:155

A8J8U5              	100.00%		D3BQJ3              	100.00%
Bootstrap support for A8J8U5 as seed ortholog is 100%.
Bootstrap support for D3BQJ3 as seed ortholog is 100%.

Group of orthologs #1070. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 P.pallidum:154

A8HXK0              	100.00%		D3AY37              	100.00%
Bootstrap support for A8HXK0 as seed ortholog is 100%.
Bootstrap support for D3AY37 as seed ortholog is 100%.

Group of orthologs #1071. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 P.pallidum:154

A8IDN7              	100.00%		D3B1N8              	100.00%
Bootstrap support for A8IDN7 as seed ortholog is 100%.
Bootstrap support for D3B1N8 as seed ortholog is 100%.

Group of orthologs #1072. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 P.pallidum:154

A8I5X4              	100.00%		D3B5S7              	100.00%
Bootstrap support for A8I5X4 as seed ortholog is 100%.
Bootstrap support for D3B5S7 as seed ortholog is 100%.

Group of orthologs #1073. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 P.pallidum:154

A8IWL0              	100.00%		D3B429              	100.00%
Bootstrap support for A8IWL0 as seed ortholog is 100%.
Bootstrap support for D3B429 as seed ortholog is 100%.

Group of orthologs #1074. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 P.pallidum:154

A8IA47              	100.00%		D3BKE7              	100.00%
Bootstrap support for A8IA47 as seed ortholog is 100%.
Bootstrap support for D3BKE7 as seed ortholog is 100%.

Group of orthologs #1075. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 P.pallidum:154

A8II91              	100.00%		D3BTQ7              	100.00%
Bootstrap support for A8II91 as seed ortholog is 100%.
Bootstrap support for D3BTQ7 as seed ortholog is 100%.

Group of orthologs #1076. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 P.pallidum:154

A8JBL9              	100.00%		D3BAW0              	100.00%
Bootstrap support for A8JBL9 as seed ortholog is 100%.
Bootstrap support for D3BAW0 as seed ortholog is 100%.

Group of orthologs #1077. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 P.pallidum:154

A8JB15              	100.00%		D3BIG5              	100.00%
Bootstrap support for A8JB15 as seed ortholog is 100%.
Bootstrap support for D3BIG5 as seed ortholog is 100%.

Group of orthologs #1078. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 P.pallidum:153

A8J1A7              	100.00%		D3B8N7              	100.00%
                    	       		D3B6H5              	12.46%
                    	       		D3B373              	8.89%
                    	       		D3BJM0              	6.81%
Bootstrap support for A8J1A7 as seed ortholog is 70%.
Alternative seed ortholog is A8HM85 (19 bits away from this cluster)
Bootstrap support for D3B8N7 as seed ortholog is 100%.

Group of orthologs #1079. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 P.pallidum:153

Q4U0V9              	100.00%		D3B215              	100.00%
Q0ZB35              	9.76%		
A8IAT7              	6.39%		
Bootstrap support for Q4U0V9 as seed ortholog is 100%.
Bootstrap support for D3B215 as seed ortholog is 100%.

Group of orthologs #1080. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 P.pallidum:58

A8IZ65              	100.00%		D3BIG3              	100.00%
A8J0Y2              	8.90%		
Bootstrap support for A8IZ65 as seed ortholog is 98%.
Bootstrap support for D3BIG3 as seed ortholog is 94%.

Group of orthologs #1081. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 P.pallidum:153

A8I8P0              	100.00%		D3AWI1              	100.00%
Bootstrap support for A8I8P0 as seed ortholog is 100%.
Bootstrap support for D3AWI1 as seed ortholog is 100%.

Group of orthologs #1082. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 P.pallidum:153

A8IYA5              	100.00%		D3B052              	100.00%
Bootstrap support for A8IYA5 as seed ortholog is 100%.
Bootstrap support for D3B052 as seed ortholog is 100%.

Group of orthologs #1083. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 P.pallidum:153

A8J8B3              	100.00%		D3B0A2              	100.00%
Bootstrap support for A8J8B3 as seed ortholog is 100%.
Bootstrap support for D3B0A2 as seed ortholog is 100%.

Group of orthologs #1084. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 P.pallidum:153

A8I795              	100.00%		D3BU88              	100.00%
Bootstrap support for A8I795 as seed ortholog is 100%.
Bootstrap support for D3BU88 as seed ortholog is 100%.

Group of orthologs #1085. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 P.pallidum:153

A8IV15              	100.00%		D3BN80              	100.00%
Bootstrap support for A8IV15 as seed ortholog is 100%.
Bootstrap support for D3BN80 as seed ortholog is 100%.

Group of orthologs #1086. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 P.pallidum:153

A8J1K6              	100.00%		D3BKL8              	100.00%
Bootstrap support for A8J1K6 as seed ortholog is 100%.
Bootstrap support for D3BKL8 as seed ortholog is 100%.

Group of orthologs #1087. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.pallidum:152

A8I1B6              	100.00%		D3BCK2              	100.00%
Bootstrap support for A8I1B6 as seed ortholog is 98%.
Bootstrap support for D3BCK2 as seed ortholog is 100%.

Group of orthologs #1088. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 P.pallidum:152

A8HP50              	100.00%		D3BVK2              	100.00%
Bootstrap support for A8HP50 as seed ortholog is 100%.
Bootstrap support for D3BVK2 as seed ortholog is 100%.

Group of orthologs #1089. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 P.pallidum:151

A8HMG7              	100.00%		D3AVM9              	100.00%
Bootstrap support for A8HMG7 as seed ortholog is 100%.
Bootstrap support for D3AVM9 as seed ortholog is 100%.

Group of orthologs #1090. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.pallidum:85

A8I9M5              	100.00%		D3B5D6              	100.00%
Bootstrap support for A8I9M5 as seed ortholog is 89%.
Bootstrap support for D3B5D6 as seed ortholog is 99%.

Group of orthologs #1091. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.pallidum:151

A8JG85              	100.00%		D3B0F6              	100.00%
Bootstrap support for A8JG85 as seed ortholog is 99%.
Bootstrap support for D3B0F6 as seed ortholog is 100%.

Group of orthologs #1092. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:9 P.pallidum:56

A8ITU6              	100.00%		D3BSP0              	100.00%
A8ITU2              	91.61%		
Bootstrap support for A8ITU6 as seed ortholog is 71%.
Alternative seed ortholog is A8ITU7 (9 bits away from this cluster)
Bootstrap support for D3BSP0 as seed ortholog is 93%.

Group of orthologs #1093. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 P.pallidum:150

A8HSK5              	100.00%		D3BEC4              	100.00%
Bootstrap support for A8HSK5 as seed ortholog is 100%.
Bootstrap support for D3BEC4 as seed ortholog is 100%.

Group of orthologs #1094. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 P.pallidum:150

A8J507              	100.00%		D3B062              	100.00%
Bootstrap support for A8J507 as seed ortholog is 100%.
Bootstrap support for D3B062 as seed ortholog is 100%.

Group of orthologs #1095. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 P.pallidum:150

A8J951              	100.00%		D3BTW0              	100.00%
Bootstrap support for A8J951 as seed ortholog is 100%.
Bootstrap support for D3BTW0 as seed ortholog is 100%.

Group of orthologs #1096. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 P.pallidum:150

A8JFC7              	100.00%		D3BUK7              	100.00%
Bootstrap support for A8JFC7 as seed ortholog is 100%.
Bootstrap support for D3BUK7 as seed ortholog is 100%.

Group of orthologs #1097. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:21 P.pallidum:35

A8JHY4              	100.00%		D3BNI8              	100.00%
Q6S7R7              	100.00%		
Bootstrap support for A8JHY4 as seed ortholog is 81%.
Bootstrap support for Q6S7R7 as seed ortholog is 84%.
Bootstrap support for D3BNI8 as seed ortholog is 87%.

Group of orthologs #1098. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:33 P.pallidum:25

A8HSC2              	100.00%		D3AWH3              	100.00%
Bootstrap support for A8HSC2 as seed ortholog is 89%.
Bootstrap support for D3AWH3 as seed ortholog is 83%.

Group of orthologs #1099. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 P.pallidum:149

A8HXH0              	100.00%		D3BJ37              	100.00%
Bootstrap support for A8HXH0 as seed ortholog is 100%.
Bootstrap support for D3BJ37 as seed ortholog is 100%.

Group of orthologs #1100. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 P.pallidum:149

A8IU94              	100.00%		D3BC01              	100.00%
Bootstrap support for A8IU94 as seed ortholog is 100%.
Bootstrap support for D3BC01 as seed ortholog is 100%.

Group of orthologs #1101. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 P.pallidum:149

A8J3T4              	100.00%		D3BNF2              	100.00%
Bootstrap support for A8J3T4 as seed ortholog is 100%.
Bootstrap support for D3BNF2 as seed ortholog is 100%.

Group of orthologs #1102. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 P.pallidum:149

A8J2R7              	100.00%		D3BSI9              	100.00%
Bootstrap support for A8J2R7 as seed ortholog is 100%.
Bootstrap support for D3BSI9 as seed ortholog is 100%.

Group of orthologs #1103. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 P.pallidum:149

A8JHU5              	100.00%		D3BSK1              	100.00%
Bootstrap support for A8JHU5 as seed ortholog is 100%.
Bootstrap support for D3BSK1 as seed ortholog is 100%.

Group of orthologs #1104. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 P.pallidum:54

A8ISP5              	100.00%		D3BUR4              	100.00%
A8J1X0              	11.04%		
Bootstrap support for A8ISP5 as seed ortholog is 69%.
Alternative seed ortholog is A8J3F7 (20 bits away from this cluster)
Bootstrap support for D3BUR4 as seed ortholog is 93%.

Group of orthologs #1105. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 P.pallidum:148

A8I3E7              	100.00%		D3B4Y2              	100.00%
Bootstrap support for A8I3E7 as seed ortholog is 100%.
Bootstrap support for D3B4Y2 as seed ortholog is 100%.

Group of orthologs #1106. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 P.pallidum:148

A8J239              	100.00%		D3B4P6              	100.00%
Bootstrap support for A8J239 as seed ortholog is 100%.
Bootstrap support for D3B4P6 as seed ortholog is 100%.

Group of orthologs #1107. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 P.pallidum:148

A8I0I1              	100.00%		D3BM86              	100.00%
Bootstrap support for A8I0I1 as seed ortholog is 100%.
Bootstrap support for D3BM86 as seed ortholog is 100%.

Group of orthologs #1108. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 P.pallidum:148

A8I4L4              	100.00%		D3BTL0              	100.00%
Bootstrap support for A8I4L4 as seed ortholog is 100%.
Bootstrap support for D3BTL0 as seed ortholog is 100%.

Group of orthologs #1109. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 P.pallidum:147

A8JD06              	100.00%		D3BHB2              	100.00%
A8HNP1              	19.35%		
Bootstrap support for A8JD06 as seed ortholog is 100%.
Bootstrap support for D3BHB2 as seed ortholog is 100%.

Group of orthologs #1110. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 P.pallidum:147

A8HXD0              	100.00%		D3B7B3              	100.00%
Bootstrap support for A8HXD0 as seed ortholog is 100%.
Bootstrap support for D3B7B3 as seed ortholog is 100%.

Group of orthologs #1111. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 P.pallidum:147

A8HPH8              	100.00%		D3BAI5              	100.00%
Bootstrap support for A8HPH8 as seed ortholog is 100%.
Bootstrap support for D3BAI5 as seed ortholog is 100%.

Group of orthologs #1112. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 P.pallidum:147

A8IIC7              	100.00%		D3B6N9              	100.00%
Bootstrap support for A8IIC7 as seed ortholog is 100%.
Bootstrap support for D3B6N9 as seed ortholog is 100%.

Group of orthologs #1113. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 P.pallidum:147

A8IV25              	100.00%		D3B508              	100.00%
Bootstrap support for A8IV25 as seed ortholog is 100%.
Bootstrap support for D3B508 as seed ortholog is 100%.

Group of orthologs #1114. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 P.pallidum:147

A8J429              	100.00%		D3B540              	100.00%
Bootstrap support for A8J429 as seed ortholog is 100%.
Bootstrap support for D3B540 as seed ortholog is 100%.

Group of orthologs #1115. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 P.pallidum:75

A8J344              	100.00%		D3B9C0              	100.00%
Bootstrap support for A8J344 as seed ortholog is 100%.
Bootstrap support for D3B9C0 as seed ortholog is 95%.

Group of orthologs #1116. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 P.pallidum:146

A8IJE8              	100.00%		D3B5A5              	100.00%
A8IDL4              	8.31%		
A8J3C6              	5.46%		
Bootstrap support for A8IJE8 as seed ortholog is 100%.
Bootstrap support for D3B5A5 as seed ortholog is 100%.

Group of orthologs #1117. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:35 P.pallidum:146

A8JH72              	100.00%		D3BQM5              	100.00%
A8J9H5              	11.15%		
Bootstrap support for A8JH72 as seed ortholog is 80%.
Bootstrap support for D3BQM5 as seed ortholog is 100%.

Group of orthologs #1118. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 P.pallidum:146

A8I0A3              	100.00%		D3BEG4              	100.00%
Bootstrap support for A8I0A3 as seed ortholog is 100%.
Bootstrap support for D3BEG4 as seed ortholog is 100%.

Group of orthologs #1119. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 P.pallidum:146

A8ISB8              	100.00%		D3BMZ6              	100.00%
Bootstrap support for A8ISB8 as seed ortholog is 100%.
Bootstrap support for D3BMZ6 as seed ortholog is 100%.

Group of orthologs #1120. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:16 P.pallidum:23

A8JBP5              	100.00%		D3B8B0              	100.00%
Bootstrap support for A8JBP5 as seed ortholog is 43%.
Alternative seed ortholog is A8HW48 (16 bits away from this cluster)
Bootstrap support for D3B8B0 as seed ortholog is 67%.
Alternative seed ortholog is D3BT03 (23 bits away from this cluster)

Group of orthologs #1121. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 P.pallidum:53

A8J757              	100.00%		D3BHT1              	100.00%
Bootstrap support for A8J757 as seed ortholog is 100%.
Bootstrap support for D3BHT1 as seed ortholog is 99%.

Group of orthologs #1122. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 P.pallidum:146

A8JDQ2              	100.00%		D3BHC6              	100.00%
Bootstrap support for A8JDQ2 as seed ortholog is 100%.
Bootstrap support for D3BHC6 as seed ortholog is 100%.

Group of orthologs #1123. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:145 P.pallidum:145

A8HMV2              	100.00%		D3BAX9              	100.00%
Bootstrap support for A8HMV2 as seed ortholog is 100%.
Bootstrap support for D3BAX9 as seed ortholog is 100%.

Group of orthologs #1124. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:145 P.pallidum:145

A8HPE7              	100.00%		D3BTY7              	100.00%
Bootstrap support for A8HPE7 as seed ortholog is 100%.
Bootstrap support for D3BTY7 as seed ortholog is 100%.

Group of orthologs #1125. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:145 P.pallidum:145

A8J888              	100.00%		D3B4M5              	100.00%
Bootstrap support for A8J888 as seed ortholog is 100%.
Bootstrap support for D3B4M5 as seed ortholog is 100%.

Group of orthologs #1126. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 P.pallidum:53

A8J746              	100.00%		D3B9X0              	100.00%
Bootstrap support for A8J746 as seed ortholog is 74%.
Alternative seed ortholog is A8J741 (20 bits away from this cluster)
Bootstrap support for D3B9X0 as seed ortholog is 99%.

Group of orthologs #1127. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:145 P.pallidum:145

A8JEC1              	100.00%		D3B4H6              	100.00%
Bootstrap support for A8JEC1 as seed ortholog is 100%.
Bootstrap support for D3B4H6 as seed ortholog is 100%.

Group of orthologs #1128. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:145 P.pallidum:145

A8J7H0              	100.00%		D3BBQ7              	100.00%
Bootstrap support for A8J7H0 as seed ortholog is 100%.
Bootstrap support for D3BBQ7 as seed ortholog is 100%.

Group of orthologs #1129. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.pallidum:41

A8IQ65              	100.00%		D3BQN3              	100.00%
Bootstrap support for A8IQ65 as seed ortholog is 99%.
Bootstrap support for D3BQN3 as seed ortholog is 93%.

Group of orthologs #1130. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 P.pallidum:93

A8JGL7              	100.00%		D3BA68              	100.00%
A8JGL6              	96.23%		
A8JGL5              	69.35%		
A8JJW2              	56.68%		
A8JGL3              	36.47%		
A8I7K6              	23.63%		
Bootstrap support for A8JGL7 as seed ortholog is 100%.
Bootstrap support for D3BA68 as seed ortholog is 99%.

Group of orthologs #1131. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 P.pallidum:23

A8I2Y4              	100.00%		D3B6G4              	100.00%
Bootstrap support for A8I2Y4 as seed ortholog is 100%.
Bootstrap support for D3B6G4 as seed ortholog is 70%.
Alternative seed ortholog is D3BHQ1 (23 bits away from this cluster)

Group of orthologs #1132. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 P.pallidum:144

A8IXP6              	100.00%		D3AVQ0              	100.00%
Bootstrap support for A8IXP6 as seed ortholog is 100%.
Bootstrap support for D3AVQ0 as seed ortholog is 100%.

Group of orthologs #1133. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 P.pallidum:144

A8J5W3              	100.00%		D3AYW2              	100.00%
Bootstrap support for A8J5W3 as seed ortholog is 100%.
Bootstrap support for D3AYW2 as seed ortholog is 100%.

Group of orthologs #1134. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.pallidum:63

A8JFF5              	100.00%		D3B7V5              	100.00%
Bootstrap support for A8JFF5 as seed ortholog is 99%.
Bootstrap support for D3B7V5 as seed ortholog is 97%.

Group of orthologs #1135. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:18 P.pallidum:17

A8J5Q5              	100.00%		D3BM67              	100.00%
Bootstrap support for A8J5Q5 as seed ortholog is 73%.
Alternative seed ortholog is A8JDW9 (18 bits away from this cluster)
Bootstrap support for D3BM67 as seed ortholog is 71%.
Alternative seed ortholog is D3BPH9 (17 bits away from this cluster)

Group of orthologs #1136. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.pallidum:143

A8HTH0              	100.00%		D3B7S7              	100.00%
Bootstrap support for A8HTH0 as seed ortholog is 100%.
Bootstrap support for D3B7S7 as seed ortholog is 100%.

Group of orthologs #1137. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.pallidum:42

A8J9I5              	100.00%		D3AVN2              	100.00%
Bootstrap support for A8J9I5 as seed ortholog is 83%.
Bootstrap support for D3AVN2 as seed ortholog is 86%.

Group of orthologs #1138. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.pallidum:143

A8J2V3              	100.00%		D3B2R4              	100.00%
Bootstrap support for A8J2V3 as seed ortholog is 100%.
Bootstrap support for D3B2R4 as seed ortholog is 100%.

Group of orthologs #1139. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.pallidum:143

A8JHR1              	100.00%		D3AY36              	100.00%
Bootstrap support for A8JHR1 as seed ortholog is 100%.
Bootstrap support for D3AY36 as seed ortholog is 100%.

Group of orthologs #1140. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 P.pallidum:37

A8JEQ5              	100.00%		D3B436              	100.00%
Bootstrap support for A8JEQ5 as seed ortholog is 94%.
Bootstrap support for D3B436 as seed ortholog is 81%.

Group of orthologs #1141. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.pallidum:143

A8J097              	100.00%		D3BK89              	100.00%
Bootstrap support for A8J097 as seed ortholog is 100%.
Bootstrap support for D3BK89 as seed ortholog is 100%.

Group of orthologs #1142. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.pallidum:143

A8IXY0              	100.00%		D3BQQ8              	100.00%
Bootstrap support for A8IXY0 as seed ortholog is 100%.
Bootstrap support for D3BQQ8 as seed ortholog is 100%.

Group of orthologs #1143. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.pallidum:143

Q8VZX3              	100.00%		D3BR70              	100.00%
Bootstrap support for Q8VZX3 as seed ortholog is 99%.
Bootstrap support for D3BR70 as seed ortholog is 100%.

Group of orthologs #1144. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 P.pallidum:142

Q70ZL8              	100.00%		D3BH20              	100.00%
A8J0K1              	79.20%		
Bootstrap support for Q70ZL8 as seed ortholog is 100%.
Bootstrap support for D3BH20 as seed ortholog is 100%.

Group of orthologs #1145. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 P.pallidum:142

A8HP90              	100.00%		D3BH46              	100.00%
Bootstrap support for A8HP90 as seed ortholog is 100%.
Bootstrap support for D3BH46 as seed ortholog is 100%.

Group of orthologs #1146. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 P.pallidum:142

A8J9F7              	100.00%		D3BHU6              	100.00%
Bootstrap support for A8J9F7 as seed ortholog is 100%.
Bootstrap support for D3BHU6 as seed ortholog is 100%.

Group of orthologs #1147. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 P.pallidum:142

A8J7F5              	100.00%		D3BTS9              	100.00%
Bootstrap support for A8J7F5 as seed ortholog is 100%.
Bootstrap support for D3BTS9 as seed ortholog is 100%.

Group of orthologs #1148. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1 P.pallidum:142

A8JIF2              	100.00%		D3BSQ1              	100.00%
Bootstrap support for A8JIF2 as seed ortholog is 45%.
Alternative seed ortholog is A8HMA7 (1 bits away from this cluster)
Bootstrap support for D3BSQ1 as seed ortholog is 100%.

Group of orthologs #1149. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.pallidum:141

A8J942              	100.00%		D3BQ12              	100.00%
A8JA41              	24.94%		
Bootstrap support for A8J942 as seed ortholog is 96%.
Bootstrap support for D3BQ12 as seed ortholog is 100%.

Group of orthologs #1150. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 P.pallidum:141

A8I946              	100.00%		D3BM84              	100.00%
Bootstrap support for A8I946 as seed ortholog is 100%.
Bootstrap support for D3BM84 as seed ortholog is 100%.

Group of orthologs #1151. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 P.pallidum:141

A8IWQ4              	100.00%		D3BEQ6              	100.00%
Bootstrap support for A8IWQ4 as seed ortholog is 100%.
Bootstrap support for D3BEQ6 as seed ortholog is 100%.

Group of orthologs #1152. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:6 P.pallidum:42

A8IPI7              	100.00%		D3BRT8              	100.00%
Bootstrap support for A8IPI7 as seed ortholog is 41%.
Alternative seed ortholog is A8HPR9 (6 bits away from this cluster)
Bootstrap support for D3BRT8 as seed ortholog is 89%.

Group of orthologs #1153. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:15 P.pallidum:36

A8J4E1              	100.00%		D3BJM3              	100.00%
                    	       		D3BPM9              	8.73%
Bootstrap support for A8J4E1 as seed ortholog is 80%.
Bootstrap support for D3BJM3 as seed ortholog is 91%.

Group of orthologs #1154. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 P.pallidum:140

A8HQM6              	100.00%		D3AY50              	100.00%
Bootstrap support for A8HQM6 as seed ortholog is 100%.
Bootstrap support for D3AY50 as seed ortholog is 100%.

Group of orthologs #1155. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 P.pallidum:140

A8HYD2              	100.00%		D3BFT1              	100.00%
Bootstrap support for A8HYD2 as seed ortholog is 100%.
Bootstrap support for D3BFT1 as seed ortholog is 100%.

Group of orthologs #1156. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 P.pallidum:140

A8IM74              	100.00%		D3B7U1              	100.00%
Bootstrap support for A8IM74 as seed ortholog is 100%.
Bootstrap support for D3B7U1 as seed ortholog is 100%.

Group of orthologs #1157. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 P.pallidum:140

A8JCG8              	100.00%		D3BST7              	100.00%
Bootstrap support for A8JCG8 as seed ortholog is 100%.
Bootstrap support for D3BST7 as seed ortholog is 100%.

Group of orthologs #1158. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 P.pallidum:139

A8IMQ3              	100.00%		D3B6E6              	100.00%
Bootstrap support for A8IMQ3 as seed ortholog is 100%.
Bootstrap support for D3B6E6 as seed ortholog is 100%.

Group of orthologs #1159. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 P.pallidum:139

A8HMD3              	100.00%		D3BLM3              	100.00%
Bootstrap support for A8HMD3 as seed ortholog is 100%.
Bootstrap support for D3BLM3 as seed ortholog is 100%.

Group of orthologs #1160. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:16 P.pallidum:139

A8HQB8              	100.00%		D3BMI1              	100.00%
Bootstrap support for A8HQB8 as seed ortholog is 63%.
Alternative seed ortholog is A8I3K8 (16 bits away from this cluster)
Bootstrap support for D3BMI1 as seed ortholog is 100%.

Group of orthologs #1161. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 P.pallidum:139

A8IS54              	100.00%		D3BIR5              	100.00%
Bootstrap support for A8IS54 as seed ortholog is 100%.
Bootstrap support for D3BIR5 as seed ortholog is 100%.

Group of orthologs #1162. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 P.pallidum:8

Q84X75              	100.00%		D3B226              	100.00%
Bootstrap support for Q84X75 as seed ortholog is 98%.
Bootstrap support for D3B226 as seed ortholog is 56%.
Alternative seed ortholog is D3BHM9 (8 bits away from this cluster)

Group of orthologs #1163. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 P.pallidum:139

A8J7N2              	100.00%		D3BJR7              	100.00%
Bootstrap support for A8J7N2 as seed ortholog is 100%.
Bootstrap support for D3BJR7 as seed ortholog is 100%.

Group of orthologs #1164. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 P.pallidum:55

A8JFA9              	100.00%		D3BEQ1              	100.00%
Bootstrap support for A8JFA9 as seed ortholog is 100%.
Bootstrap support for D3BEQ1 as seed ortholog is 94%.

Group of orthologs #1165. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.pallidum:139

A8JES1              	100.00%		D3BP66              	100.00%
Bootstrap support for A8JES1 as seed ortholog is 99%.
Bootstrap support for D3BP66 as seed ortholog is 100%.

Group of orthologs #1166. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 P.pallidum:138

A8J0M9              	100.00%		D3BMP8              	100.00%
A8JAG8              	9.89%		D3B338              	26.02%
Bootstrap support for A8J0M9 as seed ortholog is 100%.
Bootstrap support for D3BMP8 as seed ortholog is 100%.

Group of orthologs #1167. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 P.pallidum:138

A8I3I3              	100.00%		D3BEN2              	100.00%
Bootstrap support for A8I3I3 as seed ortholog is 100%.
Bootstrap support for D3BEN2 as seed ortholog is 100%.

Group of orthologs #1168. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 P.pallidum:138

A8HQC1              	100.00%		D3BL09              	100.00%
Bootstrap support for A8HQC1 as seed ortholog is 100%.
Bootstrap support for D3BL09 as seed ortholog is 100%.

Group of orthologs #1169. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 P.pallidum:138

A8HY98              	100.00%		D3BKF7              	100.00%
Bootstrap support for A8HY98 as seed ortholog is 100%.
Bootstrap support for D3BKF7 as seed ortholog is 100%.

Group of orthologs #1170. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.pallidum:138

A8JF84              	100.00%		D3AWE0              	100.00%
Bootstrap support for A8JF84 as seed ortholog is 100%.
Bootstrap support for D3AWE0 as seed ortholog is 100%.

Group of orthologs #1171. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 P.pallidum:138

A8JDW7              	100.00%		D3AYP4              	100.00%
Bootstrap support for A8JDW7 as seed ortholog is 100%.
Bootstrap support for D3AYP4 as seed ortholog is 100%.

Group of orthologs #1172. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 P.pallidum:138

A8IR87              	100.00%		D3BHP3              	100.00%
Bootstrap support for A8IR87 as seed ortholog is 100%.
Bootstrap support for D3BHP3 as seed ortholog is 100%.

Group of orthologs #1173. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.pallidum:16

A8JDL8              	100.00%		D3BR72              	100.00%
Bootstrap support for A8JDL8 as seed ortholog is 94%.
Bootstrap support for D3BR72 as seed ortholog is 50%.
Alternative seed ortholog is D3BHM9 (16 bits away from this cluster)

Group of orthologs #1174. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.pallidum:138

O64980              	100.00%		D3BKH9              	100.00%
Bootstrap support for O64980 as seed ortholog is 99%.
Bootstrap support for D3BKH9 as seed ortholog is 100%.

Group of orthologs #1175. Best score 137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 P.pallidum:75

A8IH35              	100.00%		D3B6C9              	100.00%
Bootstrap support for A8IH35 as seed ortholog is 100%.
Bootstrap support for D3B6C9 as seed ortholog is 99%.

Group of orthologs #1176. Best score 137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:22 P.pallidum:137

A8IT30              	100.00%		D3B2U1              	100.00%
Bootstrap support for A8IT30 as seed ortholog is 33%.
Alternative seed ortholog is A8HVZ9 (22 bits away from this cluster)
Bootstrap support for D3B2U1 as seed ortholog is 100%.

Group of orthologs #1177. Best score 137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 P.pallidum:137

A8J246              	100.00%		D3B823              	100.00%
Bootstrap support for A8J246 as seed ortholog is 100%.
Bootstrap support for D3B823 as seed ortholog is 100%.

Group of orthologs #1178. Best score 137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.pallidum:137

A8JDV9              	100.00%		D3BSK0              	100.00%
Bootstrap support for A8JDV9 as seed ortholog is 88%.
Bootstrap support for D3BSK0 as seed ortholog is 100%.

Group of orthologs #1179. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 P.pallidum:136

A8HZ87              	100.00%		D3AZF8              	100.00%
Bootstrap support for A8HZ87 as seed ortholog is 100%.
Bootstrap support for D3AZF8 as seed ortholog is 100%.

Group of orthologs #1180. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 P.pallidum:136

A8HP70              	100.00%		D3B482              	100.00%
Bootstrap support for A8HP70 as seed ortholog is 92%.
Bootstrap support for D3B482 as seed ortholog is 100%.

Group of orthologs #1181. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 P.pallidum:136

A8HY08              	100.00%		D3BIL1              	100.00%
Bootstrap support for A8HY08 as seed ortholog is 100%.
Bootstrap support for D3BIL1 as seed ortholog is 100%.

Group of orthologs #1182. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 P.pallidum:136

A8IHQ2              	100.00%		D3BN10              	100.00%
Bootstrap support for A8IHQ2 as seed ortholog is 100%.
Bootstrap support for D3BN10 as seed ortholog is 100%.

Group of orthologs #1183. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 P.pallidum:136

A8ISL4              	100.00%		D3BPV0              	100.00%
Bootstrap support for A8ISL4 as seed ortholog is 100%.
Bootstrap support for D3BPV0 as seed ortholog is 100%.

Group of orthologs #1184. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 P.pallidum:135

A8JFZ4              	100.00%		D3B7L3              	100.00%
A8JFZ7              	67.38%		
A8IFQ5              	10.06%		
Bootstrap support for A8JFZ4 as seed ortholog is 88%.
Bootstrap support for D3B7L3 as seed ortholog is 100%.

Group of orthologs #1185. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 P.pallidum:3

A8J3I5              	100.00%		D3BJC4              	100.00%
                    	       		D3BK51              	97.75%
Bootstrap support for A8J3I5 as seed ortholog is 100%.
Bootstrap support for D3BJC4 as seed ortholog is 44%.
Alternative seed ortholog is D3BKR3 (3 bits away from this cluster)

Group of orthologs #1186. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.pallidum:50

A8IC82              	100.00%		D3BS21              	100.00%
Bootstrap support for A8IC82 as seed ortholog is 93%.
Bootstrap support for D3BS21 as seed ortholog is 89%.

Group of orthologs #1187. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 P.pallidum:135

A8J8M9              	100.00%		D3B9Y5              	100.00%
Bootstrap support for A8J8M9 as seed ortholog is 100%.
Bootstrap support for D3B9Y5 as seed ortholog is 100%.

Group of orthologs #1188. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 P.pallidum:135

A8IZD4              	100.00%		D3BJI9              	100.00%
Bootstrap support for A8IZD4 as seed ortholog is 100%.
Bootstrap support for D3BJI9 as seed ortholog is 100%.

Group of orthologs #1189. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 P.pallidum:135

A8IXU5              	100.00%		D3BUZ2              	100.00%
Bootstrap support for A8IXU5 as seed ortholog is 100%.
Bootstrap support for D3BUZ2 as seed ortholog is 100%.

Group of orthologs #1190. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 P.pallidum:14

A8JGB3              	100.00%		D3AWM8              	100.00%
                    	       		D3AX86              	100.00%
Bootstrap support for A8JGB3 as seed ortholog is 91%.
Bootstrap support for D3AWM8 as seed ortholog is 60%.
Alternative seed ortholog is D3AXI6 (14 bits away from this cluster)
Bootstrap support for D3AX86 as seed ortholog is 63%.
Alternative seed ortholog is D3AXI6 (14 bits away from this cluster)

Group of orthologs #1191. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:134 P.pallidum:134

Q6UPR0              	100.00%		D3BTS1              	100.00%
                    	       		D3B4F2              	19.51%
Bootstrap support for Q6UPR0 as seed ortholog is 100%.
Bootstrap support for D3BTS1 as seed ortholog is 100%.

Group of orthologs #1192. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:134 P.pallidum:134

A8IIA2              	100.00%		D3B044              	100.00%
Bootstrap support for A8IIA2 as seed ortholog is 100%.
Bootstrap support for D3B044 as seed ortholog is 100%.

Group of orthologs #1193. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:134 P.pallidum:134

A8JJH8              	100.00%		D3B418              	100.00%
Bootstrap support for A8JJH8 as seed ortholog is 100%.
Bootstrap support for D3B418 as seed ortholog is 100%.

Group of orthologs #1194. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.pallidum:134

A8J8R7              	100.00%		D3BUE2              	100.00%
Bootstrap support for A8J8R7 as seed ortholog is 100%.
Bootstrap support for D3BUE2 as seed ortholog is 100%.

Group of orthologs #1195. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:29 P.pallidum:133

A8HY41              	100.00%		D3B194              	100.00%
A8HXX4              	5.67%		
Bootstrap support for A8HY41 as seed ortholog is 83%.
Bootstrap support for D3B194 as seed ortholog is 100%.

Group of orthologs #1196. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.pallidum:133

A8J9M6              	100.00%		D3BHN0              	100.00%
                    	       		D3BDA4              	13.14%
Bootstrap support for A8J9M6 as seed ortholog is 98%.
Bootstrap support for D3BHN0 as seed ortholog is 100%.

Group of orthologs #1197. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.pallidum:133

A8IRF7              	100.00%		D3B0P6              	100.00%
Bootstrap support for A8IRF7 as seed ortholog is 100%.
Bootstrap support for D3B0P6 as seed ortholog is 100%.

Group of orthologs #1198. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:10 P.pallidum:133

A8J3Q5              	100.00%		D3BA93              	100.00%
Bootstrap support for A8J3Q5 as seed ortholog is 62%.
Alternative seed ortholog is A8ITZ0 (10 bits away from this cluster)
Bootstrap support for D3BA93 as seed ortholog is 100%.

Group of orthologs #1199. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.pallidum:37

A8JBU3              	100.00%		D3B9E9              	100.00%
Bootstrap support for A8JBU3 as seed ortholog is 100%.
Bootstrap support for D3B9E9 as seed ortholog is 76%.

Group of orthologs #1200. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.pallidum:21

A8INI0              	100.00%		D3BSB7              	100.00%
Bootstrap support for A8INI0 as seed ortholog is 99%.
Bootstrap support for D3BSB7 as seed ortholog is 64%.
Alternative seed ortholog is D3B9H4 (21 bits away from this cluster)

Group of orthologs #1201. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.pallidum:133

A8J9T0              	100.00%		D3BD80              	100.00%
Bootstrap support for A8J9T0 as seed ortholog is 100%.
Bootstrap support for D3BD80 as seed ortholog is 100%.

Group of orthologs #1202. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 P.pallidum:37

A8HQ72              	100.00%		D3BT83              	100.00%
A8J8W6              	12.72%		
Bootstrap support for A8HQ72 as seed ortholog is 89%.
Bootstrap support for D3BT83 as seed ortholog is 78%.

Group of orthologs #1203. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 P.pallidum:132

A8IU80              	100.00%		D3AYD3              	100.00%
Bootstrap support for A8IU80 as seed ortholog is 100%.
Bootstrap support for D3AYD3 as seed ortholog is 100%.

Group of orthologs #1204. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 P.pallidum:132

A8J216              	100.00%		D3B0G4              	100.00%
Bootstrap support for A8J216 as seed ortholog is 100%.
Bootstrap support for D3B0G4 as seed ortholog is 100%.

Group of orthologs #1205. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.pallidum:31

A8JAD2              	100.00%		D3BBW1              	100.00%
A5YU14              	36.77%		D3BR82              	39.13%
                    	       		D3BR81              	36.39%
                    	       		D3BC38              	21.82%
Bootstrap support for A8JAD2 as seed ortholog is 100%.
Bootstrap support for D3BBW1 as seed ortholog is 53%.
Alternative seed ortholog is D3BUV5 (31 bits away from this cluster)

Group of orthologs #1206. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.pallidum:64

A8HPG8              	100.00%		D3BUP0              	100.00%
A8HZQ4              	24.31%		
Bootstrap support for A8HPG8 as seed ortholog is 99%.
Bootstrap support for D3BUP0 as seed ortholog is 99%.

Group of orthologs #1207. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.pallidum:131

A8J0N3              	100.00%		D3BIB6              	100.00%
                    	       		D3BIB9              	11.09%
Bootstrap support for A8J0N3 as seed ortholog is 100%.
Bootstrap support for D3BIB6 as seed ortholog is 100%.

Group of orthologs #1208. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.pallidum:131

A8HVK4              	100.00%		D3BB06              	100.00%
Bootstrap support for A8HVK4 as seed ortholog is 100%.
Bootstrap support for D3BB06 as seed ortholog is 100%.

Group of orthologs #1209. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.pallidum:131

A8INB8              	100.00%		D3BBT7              	100.00%
Bootstrap support for A8INB8 as seed ortholog is 100%.
Bootstrap support for D3BBT7 as seed ortholog is 100%.

Group of orthologs #1210. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.pallidum:131

A8J5T0              	100.00%		D3B0E6              	100.00%
Bootstrap support for A8J5T0 as seed ortholog is 100%.
Bootstrap support for D3B0E6 as seed ortholog is 100%.

Group of orthologs #1211. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.pallidum:131

A8JBL3              	100.00%		D3AXF4              	100.00%
Bootstrap support for A8JBL3 as seed ortholog is 100%.
Bootstrap support for D3AXF4 as seed ortholog is 100%.

Group of orthologs #1212. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.pallidum:131

A8HTR6              	100.00%		D3BU45              	100.00%
Bootstrap support for A8HTR6 as seed ortholog is 100%.
Bootstrap support for D3BU45 as seed ortholog is 100%.

Group of orthologs #1213. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.pallidum:87

A8IUG4              	100.00%		D3BU58              	100.00%
Bootstrap support for A8IUG4 as seed ortholog is 100%.
Bootstrap support for D3BU58 as seed ortholog is 99%.

Group of orthologs #1214. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 P.pallidum:46

A8IG04              	100.00%		D3BC35              	100.00%
A8J0I1              	100.00%		D3BC34              	100.00%
A8ITR3              	100.00%		D3B1H8              	100.00%
A8HNR0              	39.79%		D3B4T3              	62.53%
A8JFT7              	32.16%		D3B333              	34.05%
A8JFT6              	31.82%		D3B1Z2              	33.10%
A8J0G9              	30.82%		D3BSP2              	30.96%
A8J0L2              	10.61%		D3BSP5              	30.13%
                    	       		D3BR59              	26.93%
                    	       		D3AZN6              	26.22%
                    	       		D3B5Y3              	22.66%
                    	       		D3BVQ0              	21.47%
                    	       		D3AZN7              	17.44%
                    	       		D3B5Y4              	16.01%
                    	       		D3BBW2              	15.64%
                    	       		D3BRS5              	12.57%
                    	       		D3AZI7              	5.34%
Bootstrap support for A8IG04 as seed ortholog is 90%.
Bootstrap support for A8J0I1 as seed ortholog is 87%.
Bootstrap support for A8ITR3 as seed ortholog is 79%.
Bootstrap support for D3BC35 as seed ortholog is 88%.
Bootstrap support for D3BC34 as seed ortholog is 88%.
Bootstrap support for D3B1H8 as seed ortholog is 76%.

Group of orthologs #1215. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 P.pallidum:130

A8HMN8              	100.00%		D3BJ88              	100.00%
A8J7K0              	24.54%		D3BJN5              	18.72%
A8ICT9              	15.27%		D3BJP3              	15.11%
A8IN48              	10.67%		D3BJP1              	13.56%
A8HP14              	6.96%		D3AWZ7              	11.57%
Bootstrap support for A8HMN8 as seed ortholog is 100%.
Bootstrap support for D3BJ88 as seed ortholog is 100%.

Group of orthologs #1216. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:34 P.pallidum:130

A8I0K5              	100.00%		D3BH26              	100.00%
                    	       		D3BL05              	22.15%
Bootstrap support for A8I0K5 as seed ortholog is 26%.
Alternative seed ortholog is A8HZE6 (34 bits away from this cluster)
Bootstrap support for D3BH26 as seed ortholog is 100%.

Group of orthologs #1217. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 P.pallidum:130

A8HYD5              	100.00%		D3B1V3              	100.00%
Bootstrap support for A8HYD5 as seed ortholog is 100%.
Bootstrap support for D3B1V3 as seed ortholog is 100%.

Group of orthologs #1218. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 P.pallidum:130

A8I4X2              	100.00%		D3B3J7              	100.00%
Bootstrap support for A8I4X2 as seed ortholog is 100%.
Bootstrap support for D3B3J7 as seed ortholog is 100%.

Group of orthologs #1219. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 P.pallidum:130

A8IHI1              	100.00%		D3BNF1              	100.00%
Bootstrap support for A8IHI1 as seed ortholog is 100%.
Bootstrap support for D3BNF1 as seed ortholog is 100%.

Group of orthologs #1220. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.pallidum:73

A8J0Y4              	100.00%		D3BN32              	100.00%
A8HNC9              	18.10%		D3B294              	63.43%
                    	       		D3BN31              	51.41%
Bootstrap support for A8J0Y4 as seed ortholog is 100%.
Bootstrap support for D3BN32 as seed ortholog is 97%.

Group of orthologs #1221. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.pallidum:129

A8HWK8              	100.00%		D3AWZ9              	100.00%
Bootstrap support for A8HWK8 as seed ortholog is 100%.
Bootstrap support for D3AWZ9 as seed ortholog is 100%.

Group of orthologs #1222. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.pallidum:129

A8HPP9              	100.00%		D3B267              	100.00%
Bootstrap support for A8HPP9 as seed ortholog is 99%.
Bootstrap support for D3B267 as seed ortholog is 100%.

Group of orthologs #1223. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.pallidum:129

A8I949              	100.00%		D3B8W7              	100.00%
Bootstrap support for A8I949 as seed ortholog is 100%.
Bootstrap support for D3B8W7 as seed ortholog is 100%.

Group of orthologs #1224. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.pallidum:129

A8HNP3              	100.00%		D3BTD4              	100.00%
Bootstrap support for A8HNP3 as seed ortholog is 100%.
Bootstrap support for D3BTD4 as seed ortholog is 100%.

Group of orthologs #1225. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.pallidum:129

A8HWF0              	100.00%		D3BSD2              	100.00%
Bootstrap support for A8HWF0 as seed ortholog is 100%.
Bootstrap support for D3BSD2 as seed ortholog is 100%.

Group of orthologs #1226. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.pallidum:129

A8II85              	100.00%		D3BN47              	100.00%
Bootstrap support for A8II85 as seed ortholog is 100%.
Bootstrap support for D3BN47 as seed ortholog is 100%.

Group of orthologs #1227. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.pallidum:129

A8IRQ1              	100.00%		D3BKB6              	100.00%
Bootstrap support for A8IRQ1 as seed ortholog is 100%.
Bootstrap support for D3BKB6 as seed ortholog is 100%.

Group of orthologs #1228. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.pallidum:129

A8J4F8              	100.00%		D3BC50              	100.00%
Bootstrap support for A8J4F8 as seed ortholog is 100%.
Bootstrap support for D3BC50 as seed ortholog is 100%.

Group of orthologs #1229. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.pallidum:129

A8J6K7              	100.00%		D3BHF0              	100.00%
Bootstrap support for A8J6K7 as seed ortholog is 100%.
Bootstrap support for D3BHF0 as seed ortholog is 100%.

Group of orthologs #1230. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.pallidum:128

A8J4L6              	100.00%		D3B2A7              	100.00%
A8J629              	55.13%		D3B205              	54.21%
Bootstrap support for A8J4L6 as seed ortholog is 100%.
Bootstrap support for D3B2A7 as seed ortholog is 100%.

Group of orthologs #1231. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.pallidum:128

A8INK8              	100.00%		D3BV33              	100.00%
A8INL7              	52.06%		
Bootstrap support for A8INK8 as seed ortholog is 100%.
Bootstrap support for D3BV33 as seed ortholog is 100%.

Group of orthologs #1232. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:8 P.pallidum:128

A8IJZ3              	100.00%		D3AZM5              	100.00%
Bootstrap support for A8IJZ3 as seed ortholog is 65%.
Alternative seed ortholog is A8J3B6 (8 bits away from this cluster)
Bootstrap support for D3AZM5 as seed ortholog is 100%.

Group of orthologs #1233. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.pallidum:128

A8I7W0              	100.00%		D3B6B9              	100.00%
Bootstrap support for A8I7W0 as seed ortholog is 100%.
Bootstrap support for D3B6B9 as seed ortholog is 100%.

Group of orthologs #1234. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.pallidum:128

A8IAG8              	100.00%		D3BF07              	100.00%
Bootstrap support for A8IAG8 as seed ortholog is 100%.
Bootstrap support for D3BF07 as seed ortholog is 100%.

Group of orthologs #1235. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.pallidum:128

A8IV13              	100.00%		D3B767              	100.00%
Bootstrap support for A8IV13 as seed ortholog is 100%.
Bootstrap support for D3B767 as seed ortholog is 100%.

Group of orthologs #1236. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.pallidum:128

A8IIF8              	100.00%		D3BCL8              	100.00%
Bootstrap support for A8IIF8 as seed ortholog is 100%.
Bootstrap support for D3BCL8 as seed ortholog is 100%.

Group of orthologs #1237. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.pallidum:128

A8ICD3              	100.00%		D3BKA1              	100.00%
Bootstrap support for A8ICD3 as seed ortholog is 100%.
Bootstrap support for D3BKA1 as seed ortholog is 100%.

Group of orthologs #1238. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.pallidum:128

A8I403              	100.00%		D3BTV9              	100.00%
Bootstrap support for A8I403 as seed ortholog is 100%.
Bootstrap support for D3BTV9 as seed ortholog is 100%.

Group of orthologs #1239. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.pallidum:128

A8IYC8              	100.00%		D3BN55              	100.00%
Bootstrap support for A8IYC8 as seed ortholog is 100%.
Bootstrap support for D3BN55 as seed ortholog is 100%.

Group of orthologs #1240. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.pallidum:128

A8IV58              	100.00%		D3BUI7              	100.00%
Bootstrap support for A8IV58 as seed ortholog is 100%.
Bootstrap support for D3BUI7 as seed ortholog is 100%.

Group of orthologs #1241. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.pallidum:128

A8IY93              	100.00%		D3BTK0              	100.00%
Bootstrap support for A8IY93 as seed ortholog is 100%.
Bootstrap support for D3BTK0 as seed ortholog is 100%.

Group of orthologs #1242. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.pallidum:128

A8J6M2              	100.00%		D3BM58              	100.00%
Bootstrap support for A8J6M2 as seed ortholog is 100%.
Bootstrap support for D3BM58 as seed ortholog is 100%.

Group of orthologs #1243. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.pallidum:128

A8JBX6              	100.00%		D3BM04              	100.00%
Bootstrap support for A8JBX6 as seed ortholog is 100%.
Bootstrap support for D3BM04 as seed ortholog is 100%.

Group of orthologs #1244. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.pallidum:128

A8JCZ5              	100.00%		D3BNZ2              	100.00%
Bootstrap support for A8JCZ5 as seed ortholog is 100%.
Bootstrap support for D3BNZ2 as seed ortholog is 100%.

Group of orthologs #1245. Best score 127 bits
Score difference with first non-orthologous sequence - C.reinhardtii:127 P.pallidum:127

A8I5K4              	100.00%		D3B1E5              	100.00%
Bootstrap support for A8I5K4 as seed ortholog is 100%.
Bootstrap support for D3B1E5 as seed ortholog is 100%.

Group of orthologs #1246. Best score 127 bits
Score difference with first non-orthologous sequence - C.reinhardtii:127 P.pallidum:127

A8HPP6              	100.00%		D3B7N7              	100.00%
Bootstrap support for A8HPP6 as seed ortholog is 100%.
Bootstrap support for D3B7N7 as seed ortholog is 100%.

Group of orthologs #1247. Best score 127 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.pallidum:127

A8J3E5              	100.00%		D3BCD6              	100.00%
Bootstrap support for A8J3E5 as seed ortholog is 99%.
Bootstrap support for D3BCD6 as seed ortholog is 100%.

Group of orthologs #1248. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 P.pallidum:8

A8HUK0              	100.00%		D3B699              	100.00%
Bootstrap support for A8HUK0 as seed ortholog is 85%.
Bootstrap support for D3B699 as seed ortholog is 67%.
Alternative seed ortholog is D3B696 (8 bits away from this cluster)

Group of orthologs #1249. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.pallidum:126

A8ISS8              	100.00%		D3B246              	100.00%
Bootstrap support for A8ISS8 as seed ortholog is 100%.
Bootstrap support for D3B246 as seed ortholog is 100%.

Group of orthologs #1250. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.pallidum:126

A8IUL5              	100.00%		D3B7N8              	100.00%
Bootstrap support for A8IUL5 as seed ortholog is 100%.
Bootstrap support for D3B7N8 as seed ortholog is 100%.

Group of orthologs #1251. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.pallidum:126

A8IP02              	100.00%		D3BH55              	100.00%
Bootstrap support for A8IP02 as seed ortholog is 100%.
Bootstrap support for D3BH55 as seed ortholog is 100%.

Group of orthologs #1252. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.pallidum:49

A8JGU6              	100.00%		D3B1P2              	100.00%
Bootstrap support for A8JGU6 as seed ortholog is 96%.
Bootstrap support for D3B1P2 as seed ortholog is 97%.

Group of orthologs #1253. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.pallidum:126

A8JCP0              	100.00%		D3B660              	100.00%
Bootstrap support for A8JCP0 as seed ortholog is 100%.
Bootstrap support for D3B660 as seed ortholog is 100%.

Group of orthologs #1254. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 P.pallidum:126

A8ISJ9              	100.00%		D3BRS1              	100.00%
Bootstrap support for A8ISJ9 as seed ortholog is 94%.
Bootstrap support for D3BRS1 as seed ortholog is 100%.

Group of orthologs #1255. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.pallidum:126

A8J0V4              	100.00%		D3BSG2              	100.00%
Bootstrap support for A8J0V4 as seed ortholog is 100%.
Bootstrap support for D3BSG2 as seed ortholog is 100%.

Group of orthologs #1256. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.pallidum:47

A8JB67              	100.00%		D3BR79              	100.00%
Bootstrap support for A8JB67 as seed ortholog is 100%.
Bootstrap support for D3BR79 as seed ortholog is 99%.

Group of orthologs #1257. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 P.pallidum:58

A8IAF7              	100.00%		D3AYT1              	100.00%
Bootstrap support for A8IAF7 as seed ortholog is 86%.
Bootstrap support for D3AYT1 as seed ortholog is 95%.

Group of orthologs #1258. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 P.pallidum:125

A8ICE1              	100.00%		D3AZU6              	100.00%
Bootstrap support for A8ICE1 as seed ortholog is 100%.
Bootstrap support for D3AZU6 as seed ortholog is 100%.

Group of orthologs #1259. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 P.pallidum:125

A8IVC2              	100.00%		D3B6V9              	100.00%
Bootstrap support for A8IVC2 as seed ortholog is 100%.
Bootstrap support for D3B6V9 as seed ortholog is 100%.

Group of orthologs #1260. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 P.pallidum:125

A8JI94              	100.00%		D3AYE2              	100.00%
Bootstrap support for A8JI94 as seed ortholog is 100%.
Bootstrap support for D3AYE2 as seed ortholog is 100%.

Group of orthologs #1261. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:38 P.pallidum:66

A8J0N9              	100.00%		D3BPF6              	100.00%
Bootstrap support for A8J0N9 as seed ortholog is 94%.
Bootstrap support for D3BPF6 as seed ortholog is 99%.

Group of orthologs #1262. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.pallidum:125

Q944M8              	100.00%		D3B5L6              	100.00%
Bootstrap support for Q944M8 as seed ortholog is 98%.
Bootstrap support for D3B5L6 as seed ortholog is 100%.

Group of orthologs #1263. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 P.pallidum:124

A8I032              	100.00%		D3BGE0              	100.00%
Bootstrap support for A8I032 as seed ortholog is 100%.
Bootstrap support for D3BGE0 as seed ortholog is 100%.

Group of orthologs #1264. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 P.pallidum:124

A8IZW5              	100.00%		D3B1Q8              	100.00%
Bootstrap support for A8IZW5 as seed ortholog is 100%.
Bootstrap support for D3B1Q8 as seed ortholog is 100%.

Group of orthologs #1265. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 P.pallidum:124

A8J266              	100.00%		D3B9G3              	100.00%
Bootstrap support for A8J266 as seed ortholog is 100%.
Bootstrap support for D3B9G3 as seed ortholog is 100%.

Group of orthologs #1266. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.pallidum:123

A8J7D3              	100.00%		D3BCV8              	100.00%
A8J470              	24.70%		
A8II51              	20.72%		
A8JEP2              	17.33%		
A8I7Z1              	16.53%		
A8IV51              	16.33%		
A8I8D0              	14.34%		
A8I8D2              	13.94%		
A8IBT2              	13.55%		
A8I5E0              	10.96%		
A8I112              	7.97%		
A8HPH4              	5.58%		
Bootstrap support for A8J7D3 as seed ortholog is 100%.
Bootstrap support for D3BCV8 as seed ortholog is 100%.

Group of orthologs #1267. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.pallidum:123

A8IFM6              	100.00%		D3B9C3              	100.00%
Bootstrap support for A8IFM6 as seed ortholog is 100%.
Bootstrap support for D3B9C3 as seed ortholog is 100%.

Group of orthologs #1268. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.pallidum:123

A8HW82              	100.00%		D3BIP8              	100.00%
Bootstrap support for A8HW82 as seed ortholog is 100%.
Bootstrap support for D3BIP8 as seed ortholog is 100%.

Group of orthologs #1269. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.pallidum:123

A8J7M2              	100.00%		D3B4U0              	100.00%
Bootstrap support for A8J7M2 as seed ortholog is 100%.
Bootstrap support for D3B4U0 as seed ortholog is 100%.

Group of orthologs #1270. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.pallidum:123

A8J2N1              	100.00%		D3BB60              	100.00%
Bootstrap support for A8J2N1 as seed ortholog is 100%.
Bootstrap support for D3BB60 as seed ortholog is 100%.

Group of orthologs #1271. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.pallidum:123

A8JDK0              	100.00%		D3BF71              	100.00%
Bootstrap support for A8JDK0 as seed ortholog is 100%.
Bootstrap support for D3BF71 as seed ortholog is 100%.

Group of orthologs #1272. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.pallidum:123

A8JFJ5              	100.00%		D3BHE5              	100.00%
Bootstrap support for A8JFJ5 as seed ortholog is 100%.
Bootstrap support for D3BHE5 as seed ortholog is 100%.

Group of orthologs #1273. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.pallidum:123

A8J9L3              	100.00%		D3BP20              	100.00%
Bootstrap support for A8J9L3 as seed ortholog is 100%.
Bootstrap support for D3BP20 as seed ortholog is 100%.

Group of orthologs #1274. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.pallidum:122

A8HRZ9              	100.00%		D3BCX0              	100.00%
Bootstrap support for A8HRZ9 as seed ortholog is 98%.
Bootstrap support for D3BCX0 as seed ortholog is 100%.

Group of orthologs #1275. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.pallidum:122

A8I3E4              	100.00%		D3BGW6              	100.00%
Bootstrap support for A8I3E4 as seed ortholog is 97%.
Bootstrap support for D3BGW6 as seed ortholog is 100%.

Group of orthologs #1276. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 P.pallidum:122

A8IWN9              	100.00%		D3BB09              	100.00%
Bootstrap support for A8IWN9 as seed ortholog is 100%.
Bootstrap support for D3BB09 as seed ortholog is 100%.

Group of orthologs #1277. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 P.pallidum:122

A8IY04              	100.00%		D3BH90              	100.00%
Bootstrap support for A8IY04 as seed ortholog is 100%.
Bootstrap support for D3BH90 as seed ortholog is 100%.

Group of orthologs #1278. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 P.pallidum:122

A8JD29              	100.00%		D3B511              	100.00%
Bootstrap support for A8JD29 as seed ortholog is 100%.
Bootstrap support for D3B511 as seed ortholog is 100%.

Group of orthologs #1279. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 P.pallidum:71

A8JB48              	100.00%		D3BM32              	100.00%
Bootstrap support for A8JB48 as seed ortholog is 100%.
Bootstrap support for D3BM32 as seed ortholog is 99%.

Group of orthologs #1280. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.pallidum:121

A8HPI9              	100.00%		D3B7E6              	100.00%
A8J0R9              	60.04%		D3B3H3              	9.93%
A8J2G0              	58.01%		
A8HNV8              	57.61%		
A8HNW2              	56.59%		
A8HNV6              	54.77%		
A8HRY6              	51.72%		
A8I2W8              	49.70%		
A8JGI3              	49.09%		
A8I3L6              	48.88%		
A8JGV2              	47.46%		
A8JGQ5              	46.86%		
A8J9Z4              	46.45%		
A8JDI4              	46.25%		
A8J0S4              	43.81%		
A8JBS1              	41.78%		
A8HRJ2              	37.53%		
A8ITN3              	31.03%		
A8IKH9              	27.38%		
A8JAU0              	5.27%		
Bootstrap support for A8HPI9 as seed ortholog is 100%.
Bootstrap support for D3B7E6 as seed ortholog is 100%.

Group of orthologs #1281. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.pallidum:121

A8HVC1              	100.00%		D3B9V6              	100.00%
                    	       		D3BI36              	7.99%
                    	       		D3BRB3              	7.32%
                    	       		D3BE24              	6.95%
                    	       		D3BUS9              	5.82%
                    	       		D3B8P4              	5.61%
                    	       		D3BJS3              	5.52%
                    	       		D3BKK8              	5.15%
Bootstrap support for A8HVC1 as seed ortholog is 65%.
Alternative seed ortholog is A8IY08 (55 bits away from this cluster)
Bootstrap support for D3B9V6 as seed ortholog is 100%.

Group of orthologs #1282. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.pallidum:121

Q42680              	100.00%		D3BTM8              	100.00%
A8HSB5              	96.21%		
A8IR81              	95.45%		
A8HWF6              	93.18%		
A8HWM8              	91.67%		
A8JJE0              	82.58%		
A8JJG9              	15.15%		
Bootstrap support for Q42680 as seed ortholog is 99%.
Bootstrap support for D3BTM8 as seed ortholog is 100%.

Group of orthologs #1283. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.pallidum:13

A8HMC1              	100.00%		D3B1N0              	100.00%
                    	       		D3BGN7              	12.08%
Bootstrap support for A8HMC1 as seed ortholog is 100%.
Bootstrap support for D3B1N0 as seed ortholog is 59%.
Alternative seed ortholog is D3BHM8 (13 bits away from this cluster)

Group of orthologs #1284. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.pallidum:121

A8HQM9              	100.00%		D3B4Z3              	100.00%
Bootstrap support for A8HQM9 as seed ortholog is 100%.
Bootstrap support for D3B4Z3 as seed ortholog is 100%.

Group of orthologs #1285. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.pallidum:121

A8INQ8              	100.00%		D3BBA3              	100.00%
Bootstrap support for A8INQ8 as seed ortholog is 100%.
Bootstrap support for D3BBA3 as seed ortholog is 100%.

Group of orthologs #1286. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:24 P.pallidum:121

A8JIA7              	100.00%		D3B842              	100.00%
Bootstrap support for A8JIA7 as seed ortholog is 90%.
Bootstrap support for D3B842 as seed ortholog is 100%.

Group of orthologs #1287. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.pallidum:73

A8ICK6              	100.00%		D3B0Z6              	100.00%
Bootstrap support for A8ICK6 as seed ortholog is 96%.
Bootstrap support for D3B0Z6 as seed ortholog is 99%.

Group of orthologs #1288. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:33 P.pallidum:120

A8I9R7              	100.00%		D3B895              	100.00%
Bootstrap support for A8I9R7 as seed ortholog is 70%.
Alternative seed ortholog is A8HSS0 (33 bits away from this cluster)
Bootstrap support for D3B895 as seed ortholog is 100%.

Group of orthologs #1289. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 P.pallidum:120

A8IZZ1              	100.00%		D3BAP7              	100.00%
Bootstrap support for A8IZZ1 as seed ortholog is 100%.
Bootstrap support for D3BAP7 as seed ortholog is 100%.

Group of orthologs #1290. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 P.pallidum:120

A8IY01              	100.00%		D3BGG3              	100.00%
Bootstrap support for A8IY01 as seed ortholog is 100%.
Bootstrap support for D3BGG3 as seed ortholog is 100%.

Group of orthologs #1291. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 P.pallidum:120

A8J1A3              	100.00%		D3BK63              	100.00%
Bootstrap support for A8J1A3 as seed ortholog is 100%.
Bootstrap support for D3BK63 as seed ortholog is 100%.

Group of orthologs #1292. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 P.pallidum:120

A8JHX7              	100.00%		D3BPI0              	100.00%
Bootstrap support for A8JHX7 as seed ortholog is 100%.
Bootstrap support for D3BPI0 as seed ortholog is 100%.

Group of orthologs #1293. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.pallidum:119

A8IWG3              	100.00%		D3B7U5              	100.00%
Bootstrap support for A8IWG3 as seed ortholog is 100%.
Bootstrap support for D3B7U5 as seed ortholog is 100%.

Group of orthologs #1294. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.pallidum:119

A8J6E1              	100.00%		D3BFN3              	100.00%
Bootstrap support for A8J6E1 as seed ortholog is 100%.
Bootstrap support for D3BFN3 as seed ortholog is 100%.

Group of orthologs #1295. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.pallidum:118

A8J118              	100.00%		D3BR78              	100.00%
                    	       		D3BM81              	5.76%
                    	       		D3BCH4              	5.62%
Bootstrap support for A8J118 as seed ortholog is 100%.
Bootstrap support for D3BR78 as seed ortholog is 100%.

Group of orthologs #1296. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.pallidum:118

A8J3B3              	100.00%		D3BGR4              	100.00%
                    	       		D3BJK1              	15.86%
Bootstrap support for A8J3B3 as seed ortholog is 100%.
Bootstrap support for D3BGR4 as seed ortholog is 100%.

Group of orthologs #1297. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.pallidum:118

A8IQM3              	100.00%		D3BRU8              	100.00%
A8I2I6              	22.78%		
Bootstrap support for A8IQM3 as seed ortholog is 100%.
Bootstrap support for D3BRU8 as seed ortholog is 100%.

Group of orthologs #1298. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.pallidum:118

A8IFE6              	100.00%		D3BCL9              	100.00%
Bootstrap support for A8IFE6 as seed ortholog is 99%.
Bootstrap support for D3BCL9 as seed ortholog is 100%.

Group of orthologs #1299. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.pallidum:118

A8IW77              	100.00%		D3B9P1              	100.00%
Bootstrap support for A8IW77 as seed ortholog is 100%.
Bootstrap support for D3B9P1 as seed ortholog is 100%.

Group of orthologs #1300. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.pallidum:118

A8IZS6              	100.00%		D3B893              	100.00%
Bootstrap support for A8IZS6 as seed ortholog is 100%.
Bootstrap support for D3B893 as seed ortholog is 100%.

Group of orthologs #1301. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.pallidum:118

A8J1U3              	100.00%		D3B6S5              	100.00%
Bootstrap support for A8J1U3 as seed ortholog is 100%.
Bootstrap support for D3B6S5 as seed ortholog is 100%.

Group of orthologs #1302. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.pallidum:118

A8INX4              	100.00%		D3BJH1              	100.00%
Bootstrap support for A8INX4 as seed ortholog is 100%.
Bootstrap support for D3BJH1 as seed ortholog is 100%.

Group of orthologs #1303. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.pallidum:118

A8I9Z4              	100.00%		D3BTN8              	100.00%
Bootstrap support for A8I9Z4 as seed ortholog is 100%.
Bootstrap support for D3BTN8 as seed ortholog is 100%.

Group of orthologs #1304. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.pallidum:23

A8J0W2              	100.00%		D3AZB2              	100.00%
A8IGI7              	14.96%		D3AXF3              	11.94%
A8I4F2              	8.63%		D3BB81              	7.82%
A8HWI9              	8.09%		
A8I4B6              	7.63%		
Bootstrap support for A8J0W2 as seed ortholog is 100%.
Bootstrap support for D3AZB2 as seed ortholog is 56%.
Alternative seed ortholog is D3B3V6 (23 bits away from this cluster)

Group of orthologs #1305. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:30 P.pallidum:49

A8IDT8              	100.00%		D3B233              	100.00%
A8J2I0              	6.77%		
Bootstrap support for A8IDT8 as seed ortholog is 98%.
Bootstrap support for D3B233 as seed ortholog is 97%.

Group of orthologs #1306. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.pallidum:117

A8J6H4              	100.00%		D3AY63              	100.00%
Bootstrap support for A8J6H4 as seed ortholog is 100%.
Bootstrap support for D3AY63 as seed ortholog is 100%.

Group of orthologs #1307. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:34 P.pallidum:117

A8IUX2              	100.00%		D3BM48              	100.00%
Bootstrap support for A8IUX2 as seed ortholog is 80%.
Bootstrap support for D3BM48 as seed ortholog is 100%.

Group of orthologs #1308. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.pallidum:117

A8J0R4              	100.00%		D3BRR6              	100.00%
Bootstrap support for A8J0R4 as seed ortholog is 100%.
Bootstrap support for D3BRR6 as seed ortholog is 100%.

Group of orthologs #1309. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 P.pallidum:37

A8I318              	100.00%		D3BJ34              	100.00%
A8ILL7              	42.49%		
A8ILM1              	14.81%		
Bootstrap support for A8I318 as seed ortholog is 80%.
Bootstrap support for D3BJ34 as seed ortholog is 93%.

Group of orthologs #1310. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.pallidum:30

A8I478              	100.00%		D3B7C7              	100.00%
A8J8E3              	7.66%		
Bootstrap support for A8I478 as seed ortholog is 100%.
Bootstrap support for D3B7C7 as seed ortholog is 73%.
Alternative seed ortholog is D3BRD5 (30 bits away from this cluster)

Group of orthologs #1311. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.pallidum:116

A8I406              	100.00%		D3BF56              	100.00%
Bootstrap support for A8I406 as seed ortholog is 100%.
Bootstrap support for D3BF56 as seed ortholog is 100%.

Group of orthologs #1312. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.pallidum:116

Q6QJE1              	100.00%		D3B0C5              	100.00%
Bootstrap support for Q6QJE1 as seed ortholog is 100%.
Bootstrap support for D3B0C5 as seed ortholog is 100%.

Group of orthologs #1313. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.pallidum:116

A8JI10              	100.00%		D3BV55              	100.00%
Bootstrap support for A8JI10 as seed ortholog is 100%.
Bootstrap support for D3BV55 as seed ortholog is 100%.

Group of orthologs #1314. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.pallidum:115

A8I6F3              	100.00%		D3B1P0              	100.00%
A8J9K7              	5.71%		D3BQC1              	7.13%
Bootstrap support for A8I6F3 as seed ortholog is 86%.
Bootstrap support for D3B1P0 as seed ortholog is 100%.

Group of orthologs #1315. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 P.pallidum:30

A8HQI9              	100.00%		D3BQM9              	100.00%
                    	       		D3BGV3              	6.57%
                    	       		D3BND6              	5.00%
Bootstrap support for A8HQI9 as seed ortholog is 73%.
Alternative seed ortholog is A8INW3 (20 bits away from this cluster)
Bootstrap support for D3BQM9 as seed ortholog is 73%.
Alternative seed ortholog is D3BS34 (30 bits away from this cluster)

Group of orthologs #1316. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.pallidum:47

A8JAD3              	100.00%		D3BSQ5              	100.00%
                    	       		D3BJP6              	18.16%
Bootstrap support for A8JAD3 as seed ortholog is 100%.
Bootstrap support for D3BSQ5 as seed ortholog is 93%.

Group of orthologs #1317. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.pallidum:114

A8IC48              	100.00%		D3AVN0              	100.00%
Bootstrap support for A8IC48 as seed ortholog is 100%.
Bootstrap support for D3AVN0 as seed ortholog is 100%.

Group of orthologs #1318. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.pallidum:114

A8IXQ9              	100.00%		D3B613              	100.00%
Bootstrap support for A8IXQ9 as seed ortholog is 100%.
Bootstrap support for D3B613 as seed ortholog is 100%.

Group of orthologs #1319. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 P.pallidum:114

A8HNL1              	100.00%		D3BUE5              	100.00%
Bootstrap support for A8HNL1 as seed ortholog is 98%.
Bootstrap support for D3BUE5 as seed ortholog is 100%.

Group of orthologs #1320. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.pallidum:114

A8JCE5              	100.00%		D3AY68              	100.00%
Bootstrap support for A8JCE5 as seed ortholog is 100%.
Bootstrap support for D3AY68 as seed ortholog is 100%.

Group of orthologs #1321. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.pallidum:114

A8IP92              	100.00%		D3BGL1              	100.00%
Bootstrap support for A8IP92 as seed ortholog is 100%.
Bootstrap support for D3BGL1 as seed ortholog is 100%.

Group of orthologs #1322. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.pallidum:114

A8JH97              	100.00%		D3BDK9              	100.00%
Bootstrap support for A8JH97 as seed ortholog is 100%.
Bootstrap support for D3BDK9 as seed ortholog is 100%.

Group of orthologs #1323. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.pallidum:114

A8JE83              	100.00%		D3BP56              	100.00%
Bootstrap support for A8JE83 as seed ortholog is 100%.
Bootstrap support for D3BP56 as seed ortholog is 100%.

Group of orthologs #1324. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 P.pallidum:113

A8HRZ0              	100.00%		D3BR15              	100.00%
Q39576              	40.11%		
Bootstrap support for A8HRZ0 as seed ortholog is 100%.
Bootstrap support for D3BR15 as seed ortholog is 100%.

Group of orthologs #1325. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 P.pallidum:113

A8J576              	100.00%		D3BP72              	100.00%
A8J0V6              	31.34%		
Bootstrap support for A8J576 as seed ortholog is 100%.
Bootstrap support for D3BP72 as seed ortholog is 100%.

Group of orthologs #1326. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 P.pallidum:113

A8IV35              	100.00%		D3B7N6              	100.00%
Bootstrap support for A8IV35 as seed ortholog is 100%.
Bootstrap support for D3B7N6 as seed ortholog is 100%.

Group of orthologs #1327. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 P.pallidum:113

A8IIF1              	100.00%		D3BH56              	100.00%
Bootstrap support for A8IIF1 as seed ortholog is 100%.
Bootstrap support for D3BH56 as seed ortholog is 100%.

Group of orthologs #1328. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 P.pallidum:22

A8JCC6              	100.00%		D3BDB6              	100.00%
Bootstrap support for A8JCC6 as seed ortholog is 100%.
Bootstrap support for D3BDB6 as seed ortholog is 8%.
Alternative seed ortholog is D3B7S8 (22 bits away from this cluster)

Group of orthologs #1329. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 P.pallidum:113

A8JDV2              	100.00%		D3BN29              	100.00%
Bootstrap support for A8JDV2 as seed ortholog is 100%.
Bootstrap support for D3BN29 as seed ortholog is 100%.

Group of orthologs #1330. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.pallidum:112

A8II37              	100.00%		D3B9D8              	100.00%
                    	       		D3B0A3              	10.10%
Bootstrap support for A8II37 as seed ortholog is 100%.
Bootstrap support for D3B9D8 as seed ortholog is 100%.

Group of orthologs #1331. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.pallidum:112

A8HPR4              	100.00%		D3BBZ0              	100.00%
Bootstrap support for A8HPR4 as seed ortholog is 100%.
Bootstrap support for D3BBZ0 as seed ortholog is 100%.

Group of orthologs #1332. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.pallidum:112

A8HUN7              	100.00%		D3BMB4              	100.00%
Bootstrap support for A8HUN7 as seed ortholog is 100%.
Bootstrap support for D3BMB4 as seed ortholog is 100%.

Group of orthologs #1333. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.pallidum:112

A8HUP9              	100.00%		D3BRK8              	100.00%
Bootstrap support for A8HUP9 as seed ortholog is 100%.
Bootstrap support for D3BRK8 as seed ortholog is 100%.

Group of orthologs #1334. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.pallidum:14

A8JGG8              	100.00%		D3B3P6              	100.00%
Bootstrap support for A8JGG8 as seed ortholog is 100%.
Bootstrap support for D3B3P6 as seed ortholog is 70%.
Alternative seed ortholog is D3AVL3 (14 bits away from this cluster)

Group of orthologs #1335. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 P.pallidum:112

A8JH45              	100.00%		D3BU56              	100.00%
Bootstrap support for A8JH45 as seed ortholog is 99%.
Bootstrap support for D3BU56 as seed ortholog is 100%.

Group of orthologs #1336. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.pallidum:111

A8J9K9              	100.00%		D3B103              	100.00%
A8J7M9              	8.06%		D3AZR2              	5.19%
A8JJE3              	6.23%		D3BL69              	5.01%
Bootstrap support for A8J9K9 as seed ortholog is 100%.
Bootstrap support for D3B103 as seed ortholog is 100%.

Group of orthologs #1337. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.pallidum:111

A8I8S8              	100.00%		D3BV23              	100.00%
A8J0C2              	79.16%		
A8HV32              	26.17%		
A8IZF5              	8.89%		
Bootstrap support for A8I8S8 as seed ortholog is 100%.
Bootstrap support for D3BV23 as seed ortholog is 100%.

Group of orthologs #1338. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.pallidum:111

A8HVG5              	100.00%		D3B5S1              	100.00%
Bootstrap support for A8HVG5 as seed ortholog is 99%.
Bootstrap support for D3B5S1 as seed ortholog is 100%.

Group of orthologs #1339. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.pallidum:111

A8ILG8              	100.00%		D3AZB6              	100.00%
Bootstrap support for A8ILG8 as seed ortholog is 100%.
Bootstrap support for D3AZB6 as seed ortholog is 100%.

Group of orthologs #1340. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.pallidum:111

A8I5V9              	100.00%		D3B7V8              	100.00%
Bootstrap support for A8I5V9 as seed ortholog is 100%.
Bootstrap support for D3B7V8 as seed ortholog is 100%.

Group of orthologs #1341. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.pallidum:111

A8HT66              	100.00%		D3BE05              	100.00%
Bootstrap support for A8HT66 as seed ortholog is 100%.
Bootstrap support for D3BE05 as seed ortholog is 100%.

Group of orthologs #1342. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:24 P.pallidum:111

A8I6I3              	100.00%		D3BMS1              	100.00%
Bootstrap support for A8I6I3 as seed ortholog is 74%.
Alternative seed ortholog is A8J277 (24 bits away from this cluster)
Bootstrap support for D3BMS1 as seed ortholog is 100%.

Group of orthologs #1343. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.pallidum:111

A8J237              	100.00%		D3B9L7              	100.00%
Bootstrap support for A8J237 as seed ortholog is 100%.
Bootstrap support for D3B9L7 as seed ortholog is 100%.

Group of orthologs #1344. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:14 P.pallidum:70

A8JH05              	100.00%		D3AXK3              	100.00%
Bootstrap support for A8JH05 as seed ortholog is 75%.
Bootstrap support for D3AXK3 as seed ortholog is 99%.

Group of orthologs #1345. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 P.pallidum:111

A8JIK1              	100.00%		D3B5P9              	100.00%
Bootstrap support for A8JIK1 as seed ortholog is 77%.
Bootstrap support for D3B5P9 as seed ortholog is 100%.

Group of orthologs #1346. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.pallidum:111

A8J1G4              	100.00%		D3BQZ1              	100.00%
Bootstrap support for A8J1G4 as seed ortholog is 100%.
Bootstrap support for D3BQZ1 as seed ortholog is 100%.

Group of orthologs #1347. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.pallidum:16

Q5VLJ9              	100.00%		D3BAX0              	100.00%
Bootstrap support for Q5VLJ9 as seed ortholog is 100%.
Bootstrap support for D3BAX0 as seed ortholog is 67%.
Alternative seed ortholog is D3BRS7 (16 bits away from this cluster)

Group of orthologs #1348. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 P.pallidum:110

A8J0E8              	100.00%		D3AVN1              	100.00%
Bootstrap support for A8J0E8 as seed ortholog is 100%.
Bootstrap support for D3AVN1 as seed ortholog is 100%.

Group of orthologs #1349. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 P.pallidum:110

A8I3K3              	100.00%		D3BEI2              	100.00%
Bootstrap support for A8I3K3 as seed ortholog is 92%.
Bootstrap support for D3BEI2 as seed ortholog is 100%.

Group of orthologs #1350. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 P.pallidum:110

A8IYN5              	100.00%		D3BC06              	100.00%
Bootstrap support for A8IYN5 as seed ortholog is 100%.
Bootstrap support for D3BC06 as seed ortholog is 100%.

Group of orthologs #1351. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:14 P.pallidum:110

A8JBT0              	100.00%		D3BVD2              	100.00%
Bootstrap support for A8JBT0 as seed ortholog is 62%.
Alternative seed ortholog is A8JGJ4 (14 bits away from this cluster)
Bootstrap support for D3BVD2 as seed ortholog is 100%.

Group of orthologs #1352. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 P.pallidum:109

A8JCI2              	100.00%		D3BEK7              	100.00%
                    	       		D3BJA5              	8.93%
                    	       		D3AZN0              	5.74%
Bootstrap support for A8JCI2 as seed ortholog is 100%.
Bootstrap support for D3BEK7 as seed ortholog is 100%.

Group of orthologs #1353. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 P.pallidum:109

A8IE68              	100.00%		D3B9I6              	100.00%
A8IFN7              	13.24%		
Bootstrap support for A8IE68 as seed ortholog is 100%.
Bootstrap support for D3B9I6 as seed ortholog is 100%.

Group of orthologs #1354. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 P.pallidum:109

A8J2X5              	100.00%		D3B4M9              	100.00%
                    	       		D3B4N1              	57.78%
Bootstrap support for A8J2X5 as seed ortholog is 100%.
Bootstrap support for D3B4M9 as seed ortholog is 100%.

Group of orthologs #1355. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:17 P.pallidum:45

A8JFV0              	100.00%		D3AXZ9              	100.00%
                    	       		D3BQ64              	5.07%
Bootstrap support for A8JFV0 as seed ortholog is 64%.
Alternative seed ortholog is A8HVZ5 (17 bits away from this cluster)
Bootstrap support for D3AXZ9 as seed ortholog is 85%.

Group of orthologs #1356. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:22 P.pallidum:33

A8HNU5              	100.00%		D3BAK7              	100.00%
Bootstrap support for A8HNU5 as seed ortholog is 61%.
Alternative seed ortholog is A8JGJ7 (22 bits away from this cluster)
Bootstrap support for D3BAK7 as seed ortholog is 88%.

Group of orthologs #1357. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 P.pallidum:39

A8HZG4              	100.00%		D3B8B1              	100.00%
Bootstrap support for A8HZG4 as seed ortholog is 84%.
Bootstrap support for D3B8B1 as seed ortholog is 93%.

Group of orthologs #1358. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 P.pallidum:109

A8I4N7              	100.00%		D3BBD7              	100.00%
Bootstrap support for A8I4N7 as seed ortholog is 100%.
Bootstrap support for D3BBD7 as seed ortholog is 100%.

Group of orthologs #1359. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 P.pallidum:109

A8IE04              	100.00%		D3B9F2              	100.00%
Bootstrap support for A8IE04 as seed ortholog is 100%.
Bootstrap support for D3B9F2 as seed ortholog is 100%.

Group of orthologs #1360. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 P.pallidum:109

A8HPS7              	100.00%		D3BQL0              	100.00%
Bootstrap support for A8HPS7 as seed ortholog is 66%.
Alternative seed ortholog is A8I2S8 (36 bits away from this cluster)
Bootstrap support for D3BQL0 as seed ortholog is 100%.

Group of orthologs #1361. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 P.pallidum:109

A8IV17              	100.00%		D3BC41              	100.00%
Bootstrap support for A8IV17 as seed ortholog is 100%.
Bootstrap support for D3BC41 as seed ortholog is 100%.

Group of orthologs #1362. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 P.pallidum:109

A8IEL3              	100.00%		D3BRG1              	100.00%
Bootstrap support for A8IEL3 as seed ortholog is 100%.
Bootstrap support for D3BRG1 as seed ortholog is 100%.

Group of orthologs #1363. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.pallidum:108

A8HNX3              	100.00%		D3BAU6              	100.00%
Bootstrap support for A8HNX3 as seed ortholog is 100%.
Bootstrap support for D3BAU6 as seed ortholog is 100%.

Group of orthologs #1364. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.pallidum:108

A8J3I2              	100.00%		D3B3V2              	100.00%
Bootstrap support for A8J3I2 as seed ortholog is 100%.
Bootstrap support for D3B3V2 as seed ortholog is 100%.

Group of orthologs #1365. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.pallidum:108

A8IWF5              	100.00%		D3BG91              	100.00%
Bootstrap support for A8IWF5 as seed ortholog is 100%.
Bootstrap support for D3BG91 as seed ortholog is 100%.

Group of orthologs #1366. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.pallidum:108

A8I0C2              	100.00%		D3BUH3              	100.00%
Bootstrap support for A8I0C2 as seed ortholog is 100%.
Bootstrap support for D3BUH3 as seed ortholog is 100%.

Group of orthologs #1367. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.pallidum:108

A8J5G1              	100.00%		D3BQP7              	100.00%
Bootstrap support for A8J5G1 as seed ortholog is 100%.
Bootstrap support for D3BQP7 as seed ortholog is 100%.

Group of orthologs #1368. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.pallidum:108

A8JCX6              	100.00%		D3BK99              	100.00%
Bootstrap support for A8JCX6 as seed ortholog is 100%.
Bootstrap support for D3BK99 as seed ortholog is 100%.

Group of orthologs #1369. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.pallidum:107

A8HY72              	100.00%		D3B5Q8              	100.00%
Bootstrap support for A8HY72 as seed ortholog is 100%.
Bootstrap support for D3B5Q8 as seed ortholog is 100%.

Group of orthologs #1370. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.pallidum:107

A8ICM2              	100.00%		D3BG34              	100.00%
Bootstrap support for A8ICM2 as seed ortholog is 100%.
Bootstrap support for D3BG34 as seed ortholog is 100%.

Group of orthologs #1371. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.pallidum:107

A8IDD8              	100.00%		D3BH66              	100.00%
Bootstrap support for A8IDD8 as seed ortholog is 100%.
Bootstrap support for D3BH66 as seed ortholog is 100%.

Group of orthologs #1372. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.pallidum:107

A8JBC2              	100.00%		D3AX53              	100.00%
Bootstrap support for A8JBC2 as seed ortholog is 100%.
Bootstrap support for D3AX53 as seed ortholog is 100%.

Group of orthologs #1373. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.pallidum:107

A8J409              	100.00%		D3BAV6              	100.00%
Bootstrap support for A8J409 as seed ortholog is 100%.
Bootstrap support for D3BAV6 as seed ortholog is 100%.

Group of orthologs #1374. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.pallidum:107

A8JD59              	100.00%		D3B413              	100.00%
Bootstrap support for A8JD59 as seed ortholog is 100%.
Bootstrap support for D3B413 as seed ortholog is 100%.

Group of orthologs #1375. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.pallidum:107

A8J5B5              	100.00%		D3BGM9              	100.00%
Bootstrap support for A8J5B5 as seed ortholog is 100%.
Bootstrap support for D3BGM9 as seed ortholog is 100%.

Group of orthologs #1376. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.pallidum:107

A8J1F9              	100.00%		D3BKU0              	100.00%
Bootstrap support for A8J1F9 as seed ortholog is 100%.
Bootstrap support for D3BKU0 as seed ortholog is 100%.

Group of orthologs #1377. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.pallidum:107

A8IP53              	100.00%		D3BUI8              	100.00%
Bootstrap support for A8IP53 as seed ortholog is 100%.
Bootstrap support for D3BUI8 as seed ortholog is 100%.

Group of orthologs #1378. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.pallidum:39

A8JET7              	100.00%		D3BR31              	100.00%
Bootstrap support for A8JET7 as seed ortholog is 100%.
Bootstrap support for D3BR31 as seed ortholog is 90%.

Group of orthologs #1379. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.pallidum:107

A8JFB7              	100.00%		D3BR33              	100.00%
Bootstrap support for A8JFB7 as seed ortholog is 100%.
Bootstrap support for D3BR33 as seed ortholog is 100%.

Group of orthologs #1380. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.pallidum:107

Q9ZTA7              	100.00%		D3BKE4              	100.00%
Bootstrap support for Q9ZTA7 as seed ortholog is 100%.
Bootstrap support for D3BKE4 as seed ortholog is 100%.

Group of orthologs #1381. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.pallidum:17

A8IXR5              	100.00%		D3B053              	100.00%
Bootstrap support for A8IXR5 as seed ortholog is 100%.
Bootstrap support for D3B053 as seed ortholog is 72%.
Alternative seed ortholog is D3B478 (17 bits away from this cluster)

Group of orthologs #1382. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.pallidum:106

A8JD31              	100.00%		D3B4A7              	100.00%
Bootstrap support for A8JD31 as seed ortholog is 95%.
Bootstrap support for D3B4A7 as seed ortholog is 100%.

Group of orthologs #1383. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.pallidum:106

A8J4Q3              	100.00%		D3BKE3              	100.00%
Bootstrap support for A8J4Q3 as seed ortholog is 100%.
Bootstrap support for D3BKE3 as seed ortholog is 100%.

Group of orthologs #1384. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.pallidum:106

A8IYY2              	100.00%		D3BU06              	100.00%
Bootstrap support for A8IYY2 as seed ortholog is 100%.
Bootstrap support for D3BU06 as seed ortholog is 100%.

Group of orthologs #1385. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.pallidum:32

A8I6C7              	100.00%		D3BFU7              	100.00%
                    	       		D3AWD8              	6.48%
Bootstrap support for A8I6C7 as seed ortholog is 98%.
Bootstrap support for D3BFU7 as seed ortholog is 86%.

Group of orthologs #1386. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 P.pallidum:105

A8ITQ1              	100.00%		D3AZW3              	100.00%
Bootstrap support for A8ITQ1 as seed ortholog is 100%.
Bootstrap support for D3AZW3 as seed ortholog is 100%.

Group of orthologs #1387. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 P.pallidum:105

A8IZ24              	100.00%		D3AXF9              	100.00%
Bootstrap support for A8IZ24 as seed ortholog is 100%.
Bootstrap support for D3AXF9 as seed ortholog is 100%.

Group of orthologs #1388. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.pallidum:105

A8HT22              	100.00%		D3BEI6              	100.00%
Bootstrap support for A8HT22 as seed ortholog is 99%.
Bootstrap support for D3BEI6 as seed ortholog is 100%.

Group of orthologs #1389. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 P.pallidum:105

A8IUW8              	100.00%		D3BQT7              	100.00%
Bootstrap support for A8IUW8 as seed ortholog is 100%.
Bootstrap support for D3BQT7 as seed ortholog is 100%.

Group of orthologs #1390. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 P.pallidum:105

A8J329              	100.00%		D3BLP6              	100.00%
Bootstrap support for A8J329 as seed ortholog is 100%.
Bootstrap support for D3BLP6 as seed ortholog is 100%.

Group of orthologs #1391. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.pallidum:58

A8JHJ4              	100.00%		D3BI78              	100.00%
Bootstrap support for A8JHJ4 as seed ortholog is 98%.
Bootstrap support for D3BI78 as seed ortholog is 98%.

Group of orthologs #1392. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 P.pallidum:10

A8IZB3              	100.00%		D3B0U5              	100.00%
A8JFV4              	15.79%		
Bootstrap support for A8IZB3 as seed ortholog is 100%.
Bootstrap support for D3B0U5 as seed ortholog is 72%.
Alternative seed ortholog is D3BE00 (10 bits away from this cluster)

Group of orthologs #1393. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 P.pallidum:104

A8IE95              	100.00%		D3B0G5              	100.00%
Bootstrap support for A8IE95 as seed ortholog is 100%.
Bootstrap support for D3B0G5 as seed ortholog is 100%.

Group of orthologs #1394. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:33 P.pallidum:104

A8J834              	100.00%		D3AY14              	100.00%
Bootstrap support for A8J834 as seed ortholog is 98%.
Bootstrap support for D3AY14 as seed ortholog is 100%.

Group of orthologs #1395. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 P.pallidum:104

A8HWY9              	100.00%		D3BPE9              	100.00%
Bootstrap support for A8HWY9 as seed ortholog is 100%.
Bootstrap support for D3BPE9 as seed ortholog is 100%.

Group of orthologs #1396. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 P.pallidum:104

A8J2V4              	100.00%		D3B862              	100.00%
Bootstrap support for A8J2V4 as seed ortholog is 100%.
Bootstrap support for D3B862 as seed ortholog is 100%.

Group of orthologs #1397. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 P.pallidum:104

A8J6Z1              	100.00%		D3BGQ4              	100.00%
Bootstrap support for A8J6Z1 as seed ortholog is 72%.
Alternative seed ortholog is A8JAL6 (19 bits away from this cluster)
Bootstrap support for D3BGQ4 as seed ortholog is 100%.

Group of orthologs #1398. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 P.pallidum:104

A8J2R2              	100.00%		D3BKH8              	100.00%
Bootstrap support for A8J2R2 as seed ortholog is 100%.
Bootstrap support for D3BKH8 as seed ortholog is 100%.

Group of orthologs #1399. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 P.pallidum:103

A8HNC7              	100.00%		D3BIQ8              	100.00%
Bootstrap support for A8HNC7 as seed ortholog is 100%.
Bootstrap support for D3BIQ8 as seed ortholog is 100%.

Group of orthologs #1400. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 P.pallidum:103

A8JAR5              	100.00%		D3AXJ0              	100.00%
Bootstrap support for A8JAR5 as seed ortholog is 100%.
Bootstrap support for D3AXJ0 as seed ortholog is 100%.

Group of orthologs #1401. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 P.pallidum:103

A8JCI4              	100.00%		D3B0P8              	100.00%
Bootstrap support for A8JCI4 as seed ortholog is 100%.
Bootstrap support for D3B0P8 as seed ortholog is 100%.

Group of orthologs #1402. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 P.pallidum:103

A8IY22              	100.00%		D3BGC7              	100.00%
Bootstrap support for A8IY22 as seed ortholog is 100%.
Bootstrap support for D3BGC7 as seed ortholog is 100%.

Group of orthologs #1403. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 P.pallidum:103

A8J4G2              	100.00%		D3BGS2              	100.00%
Bootstrap support for A8J4G2 as seed ortholog is 100%.
Bootstrap support for D3BGS2 as seed ortholog is 100%.

Group of orthologs #1404. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.pallidum:102

A8HXD3              	100.00%		D3B957              	100.00%
Bootstrap support for A8HXD3 as seed ortholog is 100%.
Bootstrap support for D3B957 as seed ortholog is 100%.

Group of orthologs #1405. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.pallidum:102

A8IPS8              	100.00%		D3B538              	100.00%
Bootstrap support for A8IPS8 as seed ortholog is 100%.
Bootstrap support for D3B538 as seed ortholog is 100%.

Group of orthologs #1406. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.pallidum:102

A8IGK2              	100.00%		D3BAV8              	100.00%
Bootstrap support for A8IGK2 as seed ortholog is 100%.
Bootstrap support for D3BAV8 as seed ortholog is 100%.

Group of orthologs #1407. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.pallidum:102

A8HSS5              	100.00%		D3BQ99              	100.00%
Bootstrap support for A8HSS5 as seed ortholog is 100%.
Bootstrap support for D3BQ99 as seed ortholog is 100%.

Group of orthologs #1408. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.pallidum:102

A8J131              	100.00%		D3BT27              	100.00%
Bootstrap support for A8J131 as seed ortholog is 100%.
Bootstrap support for D3BT27 as seed ortholog is 100%.

Group of orthologs #1409. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.pallidum:101

A8I6I8              	100.00%		D3B3E1              	100.00%
                    	       		D3B362              	45.58%
Bootstrap support for A8I6I8 as seed ortholog is 100%.
Bootstrap support for D3B3E1 as seed ortholog is 100%.

Group of orthologs #1410. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.pallidum:101

A8IK60              	100.00%		D3BFR6              	100.00%
                    	       		D3BRT3              	100.00%
Bootstrap support for A8IK60 as seed ortholog is 100%.
Bootstrap support for D3BFR6 as seed ortholog is 100%.
Bootstrap support for D3BRT3 as seed ortholog is 100%.

Group of orthologs #1411. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.pallidum:101

A8HVN9              	100.00%		D3BAZ9              	100.00%
Bootstrap support for A8HVN9 as seed ortholog is 100%.
Bootstrap support for D3BAZ9 as seed ortholog is 100%.

Group of orthologs #1412. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.pallidum:101

A8IYY1              	100.00%		D3B0P0              	100.00%
Bootstrap support for A8IYY1 as seed ortholog is 100%.
Bootstrap support for D3B0P0 as seed ortholog is 100%.

Group of orthologs #1413. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.pallidum:101

A8IS22              	100.00%		D3BBQ4              	100.00%
Bootstrap support for A8IS22 as seed ortholog is 100%.
Bootstrap support for D3BBQ4 as seed ortholog is 100%.

Group of orthologs #1414. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.pallidum:101

A8JCQ0              	100.00%		D3BB70              	100.00%
Bootstrap support for A8JCQ0 as seed ortholog is 100%.
Bootstrap support for D3BB70 as seed ortholog is 100%.

Group of orthologs #1415. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.pallidum:101

A8IY12              	100.00%		D3BR49              	100.00%
Bootstrap support for A8IY12 as seed ortholog is 100%.
Bootstrap support for D3BR49 as seed ortholog is 100%.

Group of orthologs #1416. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.pallidum:101

Q2HWK7              	100.00%		D3BMF1              	100.00%
Bootstrap support for Q2HWK7 as seed ortholog is 100%.
Bootstrap support for D3BMF1 as seed ortholog is 100%.

Group of orthologs #1417. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 P.pallidum:100

A8JGC0              	100.00%		D3BR67              	100.00%
Bootstrap support for A8JGC0 as seed ortholog is 100%.
Bootstrap support for D3BR67 as seed ortholog is 100%.

Group of orthologs #1418. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.pallidum:99

A8JAU8              	100.00%		D3B032              	100.00%
A8J9A2              	21.53%		D3BVR3              	21.71%
A8J7F3              	19.62%		D3BNL1              	17.56%
A8I6T9              	17.51%		D3BEM5              	16.60%
A8HRY1              	16.27%		
A8ITX8              	15.50%		
A8JHV6              	13.97%		
A8JBK6              	13.49%		
A8I1C2              	13.30%		
A8IJQ8              	13.21%		
A8J7B1              	12.25%		
A8JEW5              	9.00%		
A8HQ33              	8.23%		
A8I3B9              	7.08%		
A8HMT9              	6.79%		
Bootstrap support for A8JAU8 as seed ortholog is 100%.
Bootstrap support for D3B032 as seed ortholog is 100%.

Group of orthologs #1419. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.pallidum:5

A8JCP3              	100.00%		D3B083              	100.00%
                    	       		D3AWW8              	37.81%
                    	       		D3B746              	26.59%
                    	       		D3BGR3              	18.69%
                    	       		D3AZE4              	17.16%
                    	       		D3BID2              	15.13%
                    	       		D3B7W6              	8.21%
Bootstrap support for A8JCP3 as seed ortholog is 100%.
Bootstrap support for D3B083 as seed ortholog is 82%.

Group of orthologs #1420. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.pallidum:99

A8JDY6              	100.00%		D3B9P6              	100.00%
A8I412              	23.25%		D3BQA0              	23.82%
                    	       		D3BMP1              	8.22%
Bootstrap support for A8JDY6 as seed ortholog is 100%.
Bootstrap support for D3B9P6 as seed ortholog is 100%.

Group of orthologs #1421. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.pallidum:99

A8I9R1              	100.00%		D3B7Q8              	100.00%
Bootstrap support for A8I9R1 as seed ortholog is 100%.
Bootstrap support for D3B7Q8 as seed ortholog is 100%.

Group of orthologs #1422. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.pallidum:99

A8ICA8              	100.00%		D3B7V9              	100.00%
Bootstrap support for A8ICA8 as seed ortholog is 92%.
Bootstrap support for D3B7V9 as seed ortholog is 100%.

Group of orthologs #1423. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.pallidum:99

A8J8J3              	100.00%		D3AW87              	100.00%
Bootstrap support for A8J8J3 as seed ortholog is 99%.
Bootstrap support for D3AW87 as seed ortholog is 100%.

Group of orthologs #1424. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.pallidum:99

A8IQC1              	100.00%		D3BK76              	100.00%
Bootstrap support for A8IQC1 as seed ortholog is 100%.
Bootstrap support for D3BK76 as seed ortholog is 100%.

Group of orthologs #1425. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.pallidum:99

A8J4E2              	100.00%		D3BC02              	100.00%
Bootstrap support for A8J4E2 as seed ortholog is 100%.
Bootstrap support for D3BC02 as seed ortholog is 100%.

Group of orthologs #1426. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.pallidum:99

A8JHW7              	100.00%		D3B6R0              	100.00%
Bootstrap support for A8JHW7 as seed ortholog is 100%.
Bootstrap support for D3B6R0 as seed ortholog is 100%.

Group of orthologs #1427. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.pallidum:99

A8JHW6              	100.00%		D3BV18              	100.00%
Bootstrap support for A8JHW6 as seed ortholog is 100%.
Bootstrap support for D3BV18 as seed ortholog is 100%.

Group of orthologs #1428. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 P.pallidum:98

A8IAK6              	100.00%		D3B835              	100.00%
A8JFV5              	100.00%		D3BDT5              	100.00%
A8J2A4              	7.83%		D3BDT4              	70.13%
Bootstrap support for A8IAK6 as seed ortholog is 100%.
Bootstrap support for A8JFV5 as seed ortholog is 100%.
Bootstrap support for D3B835 as seed ortholog is 100%.
Bootstrap support for D3BDT5 as seed ortholog is 100%.

Group of orthologs #1429. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 P.pallidum:98

A8HQ80              	100.00%		D3B5G1              	100.00%
                    	       		D3BB79              	31.85%
Bootstrap support for A8HQ80 as seed ortholog is 100%.
Bootstrap support for D3B5G1 as seed ortholog is 100%.

Group of orthologs #1430. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 P.pallidum:98

A8ISN0              	100.00%		D3B8L0              	100.00%
                    	       		D3BPS9              	7.23%
Bootstrap support for A8ISN0 as seed ortholog is 100%.
Bootstrap support for D3B8L0 as seed ortholog is 100%.

Group of orthologs #1431. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 P.pallidum:19

A8IYH0              	100.00%		D3B410              	100.00%
Bootstrap support for A8IYH0 as seed ortholog is 98%.
Bootstrap support for D3B410 as seed ortholog is 80%.

Group of orthologs #1432. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 P.pallidum:98

A8IPU0              	100.00%		D3BAK2              	100.00%
Bootstrap support for A8IPU0 as seed ortholog is 100%.
Bootstrap support for D3BAK2 as seed ortholog is 100%.

Group of orthologs #1433. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:29 P.pallidum:39

A8J3W4              	100.00%		D3BCG7              	100.00%
Bootstrap support for A8J3W4 as seed ortholog is 90%.
Bootstrap support for D3BCG7 as seed ortholog is 95%.

Group of orthologs #1434. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 P.pallidum:98

A8J8P4              	100.00%		D3BUG2              	100.00%
Bootstrap support for A8J8P4 as seed ortholog is 100%.
Bootstrap support for D3BUG2 as seed ortholog is 100%.

Group of orthologs #1435. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.pallidum:97

A8JIU8              	100.00%		D3B9K1              	100.00%
A8IVU6              	32.57%		
A8JF90              	14.46%		
A8JF89              	12.63%		
A8IHW3              	12.30%		
A8J6D9              	12.00%		
A8JF52              	11.83%		
A8ISH7              	10.55%		
A8IQ59              	8.55%		
Bootstrap support for A8JIU8 as seed ortholog is 100%.
Bootstrap support for D3B9K1 as seed ortholog is 100%.

Group of orthologs #1436. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.pallidum:42

A8HNI9              	100.00%		D3BV60              	100.00%
A8HQ73              	23.45%		
Bootstrap support for A8HNI9 as seed ortholog is 100%.
Bootstrap support for D3BV60 as seed ortholog is 83%.

Group of orthologs #1437. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.pallidum:97

A8HUH8              	100.00%		D3B9X1              	100.00%
Bootstrap support for A8HUH8 as seed ortholog is 100%.
Bootstrap support for D3B9X1 as seed ortholog is 100%.

Group of orthologs #1438. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.pallidum:97

A8IUM9              	100.00%		D3B2N6              	100.00%
Bootstrap support for A8IUM9 as seed ortholog is 100%.
Bootstrap support for D3B2N6 as seed ortholog is 100%.

Group of orthologs #1439. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 P.pallidum:97

A8IGG2              	100.00%		D3BFH1              	100.00%
Bootstrap support for A8IGG2 as seed ortholog is 75%.
Bootstrap support for D3BFH1 as seed ortholog is 100%.

Group of orthologs #1440. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.pallidum:97

A8J073              	100.00%		D3B9S7              	100.00%
Bootstrap support for A8J073 as seed ortholog is 100%.
Bootstrap support for D3B9S7 as seed ortholog is 100%.

Group of orthologs #1441. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.pallidum:97

A8J257              	100.00%		D3B7Z5              	100.00%
Bootstrap support for A8J257 as seed ortholog is 100%.
Bootstrap support for D3B7Z5 as seed ortholog is 100%.

Group of orthologs #1442. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.pallidum:97

A8IZM6              	100.00%		D3BE03              	100.00%
Bootstrap support for A8IZM6 as seed ortholog is 100%.
Bootstrap support for D3BE03 as seed ortholog is 100%.

Group of orthologs #1443. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.pallidum:97

A8I0Y2              	100.00%		D3BUT5              	100.00%
Bootstrap support for A8I0Y2 as seed ortholog is 100%.
Bootstrap support for D3BUT5 as seed ortholog is 100%.

Group of orthologs #1444. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.pallidum:97

A8IIY3              	100.00%		D3BR37              	100.00%
Bootstrap support for A8IIY3 as seed ortholog is 100%.
Bootstrap support for D3BR37 as seed ortholog is 100%.

Group of orthologs #1445. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.pallidum:97

A8IWV3              	100.00%		D3BNR6              	100.00%
Bootstrap support for A8IWV3 as seed ortholog is 100%.
Bootstrap support for D3BNR6 as seed ortholog is 100%.

Group of orthologs #1446. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.pallidum:97

A8JCT0              	100.00%		D3BCH8              	100.00%
Bootstrap support for A8JCT0 as seed ortholog is 91%.
Bootstrap support for D3BCH8 as seed ortholog is 100%.

Group of orthologs #1447. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.pallidum:97

A8J7X4              	100.00%		D3BQY5              	100.00%
Bootstrap support for A8J7X4 as seed ortholog is 100%.
Bootstrap support for D3BQY5 as seed ortholog is 100%.

Group of orthologs #1448. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.pallidum:18

A8HQG8              	100.00%		D3AYE0              	100.00%
A8II27              	8.27%		
Bootstrap support for A8HQG8 as seed ortholog is 100%.
Bootstrap support for D3AYE0 as seed ortholog is 69%.
Alternative seed ortholog is D3B4Y1 (18 bits away from this cluster)

Group of orthologs #1449. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.pallidum:43

A8HXE1              	100.00%		D3B811              	100.00%
A8J778              	12.31%		
Bootstrap support for A8HXE1 as seed ortholog is 99%.
Bootstrap support for D3B811 as seed ortholog is 98%.

Group of orthologs #1450. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.pallidum:96

A8J6Q2              	100.00%		D3BG96              	100.00%
A8J7V2              	8.51%		
Bootstrap support for A8J6Q2 as seed ortholog is 94%.
Bootstrap support for D3BG96 as seed ortholog is 100%.

Group of orthologs #1451. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.pallidum:96

A8HMR2              	100.00%		D3B8K1              	100.00%
Bootstrap support for A8HMR2 as seed ortholog is 100%.
Bootstrap support for D3B8K1 as seed ortholog is 100%.

Group of orthologs #1452. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.pallidum:96

A8HP31              	100.00%		D3BFL2              	100.00%
Bootstrap support for A8HP31 as seed ortholog is 100%.
Bootstrap support for D3BFL2 as seed ortholog is 100%.

Group of orthologs #1453. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.pallidum:96

A8HQ97              	100.00%		D3BF90              	100.00%
Bootstrap support for A8HQ97 as seed ortholog is 100%.
Bootstrap support for D3BF90 as seed ortholog is 100%.

Group of orthologs #1454. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.pallidum:96

A8J585              	100.00%		D3AYU8              	100.00%
Bootstrap support for A8J585 as seed ortholog is 100%.
Bootstrap support for D3AYU8 as seed ortholog is 100%.

Group of orthologs #1455. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 P.pallidum:95

A8J2P8              	100.00%		D3BHL3              	100.00%
Bootstrap support for A8J2P8 as seed ortholog is 100%.
Bootstrap support for D3BHL3 as seed ortholog is 100%.

Group of orthologs #1456. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 P.pallidum:95

Q84U22              	100.00%		D3BEI5              	100.00%
Bootstrap support for Q84U22 as seed ortholog is 100%.
Bootstrap support for D3BEI5 as seed ortholog is 100%.

Group of orthologs #1457. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.pallidum:94

A8JAJ7              	100.00%		D3B562              	100.00%
                    	       		D3B570              	42.88%
                    	       		D3BUM1              	32.36%
                    	       		D3BPN3              	16.96%
Bootstrap support for A8JAJ7 as seed ortholog is 100%.
Bootstrap support for D3B562 as seed ortholog is 100%.

Group of orthologs #1458. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.pallidum:94

A8I9X5              	100.00%		D3AZ81              	100.00%
                    	       		D3B2S2              	7.27%
Bootstrap support for A8I9X5 as seed ortholog is 100%.
Bootstrap support for D3AZ81 as seed ortholog is 100%.

Group of orthologs #1459. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.pallidum:94

A8IZC0              	100.00%		D3BV77              	100.00%
                    	       		D3BR41              	5.06%
Bootstrap support for A8IZC0 as seed ortholog is 100%.
Bootstrap support for D3BV77 as seed ortholog is 100%.

Group of orthologs #1460. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 P.pallidum:94

A8INI6              	100.00%		D3B9Q4              	100.00%
Bootstrap support for A8INI6 as seed ortholog is 72%.
Alternative seed ortholog is A8J572 (20 bits away from this cluster)
Bootstrap support for D3B9Q4 as seed ortholog is 100%.

Group of orthologs #1461. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.pallidum:94

A8J824              	100.00%		D3AWR9              	100.00%
Bootstrap support for A8J824 as seed ortholog is 100%.
Bootstrap support for D3AWR9 as seed ortholog is 100%.

Group of orthologs #1462. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1 P.pallidum:94

A8J193              	100.00%		D3BE02              	100.00%
Bootstrap support for A8J193 as seed ortholog is 45%.
Alternative seed ortholog is A8HMD4 (1 bits away from this cluster)
Bootstrap support for D3BE02 as seed ortholog is 100%.

Group of orthologs #1463. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.pallidum:94

A8I5E8              	100.00%		D3BUQ1              	100.00%
Bootstrap support for A8I5E8 as seed ortholog is 100%.
Bootstrap support for D3BUQ1 as seed ortholog is 100%.

Group of orthologs #1464. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.pallidum:94

A8JCS9              	100.00%		D3BEF4              	100.00%
Bootstrap support for A8JCS9 as seed ortholog is 100%.
Bootstrap support for D3BEF4 as seed ortholog is 100%.

Group of orthologs #1465. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.pallidum:94

A8JA86              	100.00%		D3BM28              	100.00%
Bootstrap support for A8JA86 as seed ortholog is 100%.
Bootstrap support for D3BM28 as seed ortholog is 100%.

Group of orthologs #1466. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 P.pallidum:93

A8JI52              	100.00%		D3B7E2              	100.00%
Bootstrap support for A8JI52 as seed ortholog is 100%.
Bootstrap support for D3B7E2 as seed ortholog is 100%.

Group of orthologs #1467. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 P.pallidum:93

A8JA11              	100.00%		D3BL70              	100.00%
Bootstrap support for A8JA11 as seed ortholog is 91%.
Bootstrap support for D3BL70 as seed ortholog is 100%.

Group of orthologs #1468. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.pallidum:92

A8IA94              	100.00%		D3BHE1              	100.00%
Bootstrap support for A8IA94 as seed ortholog is 100%.
Bootstrap support for D3BHE1 as seed ortholog is 100%.

Group of orthologs #1469. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.pallidum:92

A8J6T2              	100.00%		D3BF34              	100.00%
Bootstrap support for A8J6T2 as seed ortholog is 100%.
Bootstrap support for D3BF34 as seed ortholog is 100%.

Group of orthologs #1470. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.pallidum:92

A8J601              	100.00%		D3BHC4              	100.00%
Bootstrap support for A8J601 as seed ortholog is 100%.
Bootstrap support for D3BHC4 as seed ortholog is 100%.

Group of orthologs #1471. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.pallidum:92

A8J1K4              	100.00%		D3BPU5              	100.00%
Bootstrap support for A8J1K4 as seed ortholog is 100%.
Bootstrap support for D3BPU5 as seed ortholog is 100%.

Group of orthologs #1472. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.pallidum:92

A8JGS4              	100.00%		D3BG33              	100.00%
Bootstrap support for A8JGS4 as seed ortholog is 100%.
Bootstrap support for D3BG33 as seed ortholog is 100%.

Group of orthologs #1473. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.pallidum:91

A8HTC4              	100.00%		D3BH70              	100.00%
A8HZA1              	17.04%		
Bootstrap support for A8HTC4 as seed ortholog is 100%.
Bootstrap support for D3BH70 as seed ortholog is 100%.

Group of orthologs #1474. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:30 P.pallidum:91

A8IVB1              	100.00%		D3B0J7              	100.00%
Bootstrap support for A8IVB1 as seed ortholog is 95%.
Bootstrap support for D3B0J7 as seed ortholog is 100%.

Group of orthologs #1475. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.pallidum:91

A8HWT6              	100.00%		D3BIM6              	100.00%
Bootstrap support for A8HWT6 as seed ortholog is 100%.
Bootstrap support for D3BIM6 as seed ortholog is 100%.

Group of orthologs #1476. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.pallidum:91

A8J4V4              	100.00%		D3B0M5              	100.00%
Bootstrap support for A8J4V4 as seed ortholog is 100%.
Bootstrap support for D3B0M5 as seed ortholog is 100%.

Group of orthologs #1477. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.pallidum:91

A8J7J8              	100.00%		D3B5Z9              	100.00%
Bootstrap support for A8J7J8 as seed ortholog is 100%.
Bootstrap support for D3B5Z9 as seed ortholog is 100%.

Group of orthologs #1478. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:24 P.pallidum:40

A8J8L3              	100.00%		D3B7X6              	100.00%
Bootstrap support for A8J8L3 as seed ortholog is 86%.
Bootstrap support for D3B7X6 as seed ortholog is 95%.

Group of orthologs #1479. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.pallidum:91

A8IZM3              	100.00%		D3BJ79              	100.00%
Bootstrap support for A8IZM3 as seed ortholog is 100%.
Bootstrap support for D3BJ79 as seed ortholog is 100%.

Group of orthologs #1480. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 P.pallidum:90

A8IKY9              	100.00%		D3BGK9              	100.00%
Bootstrap support for A8IKY9 as seed ortholog is 100%.
Bootstrap support for D3BGK9 as seed ortholog is 100%.

Group of orthologs #1481. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 P.pallidum:90

A8IYZ2              	100.00%		D3BJY7              	100.00%
Bootstrap support for A8IYZ2 as seed ortholog is 100%.
Bootstrap support for D3BJY7 as seed ortholog is 100%.

Group of orthologs #1482. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.pallidum:89

A8JEB2              	100.00%		D3BB48              	100.00%
A8JEA9              	100.00%		D3BFL6              	100.00%
A8J6F3              	10.25%		D3BKW9              	78.62%
                    	       		D3BKS3              	76.73%
                    	       		D3BMF7              	67.92%
                    	       		D3BMJ1              	64.78%
                    	       		D3B9X4              	63.84%
                    	       		D3BRI5              	24.92%
                    	       		D3BFT4              	23.05%
                    	       		D3BKN3              	22.12%
                    	       		D3BNP5              	22.01%
                    	       		D3AYV2              	21.70%
                    	       		D3B3T7              	18.55%
                    	       		D3B3T6              	17.92%
Bootstrap support for A8JEB2 as seed ortholog is 100%.
Bootstrap support for A8JEA9 as seed ortholog is 100%.
Bootstrap support for D3BB48 as seed ortholog is 100%.
Bootstrap support for D3BFL6 as seed ortholog is 100%.

Group of orthologs #1483. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:9 P.pallidum:10

A8I8V2              	100.00%		D3B867              	100.00%
A8ITJ7              	37.26%		D3AVW1              	12.61%
A8IY83              	34.04%		D3AYU2              	8.08%
A8ITJ6              	33.76%		
A8I8U7              	32.57%		
A8I1B3              	31.74%		
A8J151              	24.93%		
A8J5K0              	19.32%		
A8J7G7              	5.06%		
Bootstrap support for A8I8V2 as seed ortholog is 61%.
Alternative seed ortholog is A8IVV6 (9 bits away from this cluster)
Bootstrap support for D3B867 as seed ortholog is 60%.
Alternative seed ortholog is D3B860 (10 bits away from this cluster)

Group of orthologs #1484. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.pallidum:89

A8J3N0              	100.00%		D3BV21              	100.00%
A8J7M6              	7.68%		
Bootstrap support for A8J3N0 as seed ortholog is 100%.
Bootstrap support for D3BV21 as seed ortholog is 100%.

Group of orthologs #1485. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.pallidum:89

A2PZD3              	100.00%		D3B351              	100.00%
Bootstrap support for A2PZD3 as seed ortholog is 100%.
Bootstrap support for D3B351 as seed ortholog is 100%.

Group of orthologs #1486. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.pallidum:89

A8HNQ4              	100.00%		D3B4P7              	100.00%
Bootstrap support for A8HNQ4 as seed ortholog is 100%.
Bootstrap support for D3B4P7 as seed ortholog is 100%.

Group of orthologs #1487. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.pallidum:89

A8IYG3              	100.00%		D3B8B3              	100.00%
Bootstrap support for A8IYG3 as seed ortholog is 100%.
Bootstrap support for D3B8B3 as seed ortholog is 100%.

Group of orthologs #1488. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.pallidum:89

A8IGB6              	100.00%		D3BI19              	100.00%
Bootstrap support for A8IGB6 as seed ortholog is 100%.
Bootstrap support for D3BI19 as seed ortholog is 100%.

Group of orthologs #1489. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.pallidum:89

A8J9X1              	100.00%		D3BU60              	100.00%
Bootstrap support for A8J9X1 as seed ortholog is 96%.
Bootstrap support for D3BU60 as seed ortholog is 100%.

Group of orthologs #1490. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 P.pallidum:88

A8I6D1              	100.00%		D3BQ01              	100.00%
Bootstrap support for A8I6D1 as seed ortholog is 100%.
Bootstrap support for D3BQ01 as seed ortholog is 100%.

Group of orthologs #1491. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 P.pallidum:88

A8J1N7              	100.00%		D3BVD4              	100.00%
Bootstrap support for A8J1N7 as seed ortholog is 100%.
Bootstrap support for D3BVD4 as seed ortholog is 100%.

Group of orthologs #1492. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.pallidum:87

A8JBB4              	100.00%		D3BBY4              	100.00%
A8JBE2              	49.86%		D3BAR5              	18.24%
A8JBA7              	47.29%		D3BSL8              	14.15%
                    	       		D3AYV3              	13.84%
                    	       		D3AZ39              	13.21%
                    	       		D3BPF4              	12.26%
                    	       		D3BUQ5              	9.75%
Bootstrap support for A8JBB4 as seed ortholog is 93%.
Bootstrap support for D3BBY4 as seed ortholog is 100%.

Group of orthologs #1493. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.pallidum:87

A8JCI9              	100.00%		D3BHA2              	100.00%
A8J915              	18.24%		
A8HPZ0              	17.57%		
A8J759              	14.05%		
Bootstrap support for A8JCI9 as seed ortholog is 100%.
Bootstrap support for D3BHA2 as seed ortholog is 100%.

Group of orthologs #1494. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.pallidum:86

A8IF06              	100.00%		D3BAA3              	100.00%
                    	       		D3AVG4              	60.83%
                    	       		D3BBA6              	52.72%
Bootstrap support for A8IF06 as seed ortholog is 100%.
Bootstrap support for D3BAA3 as seed ortholog is 100%.

Group of orthologs #1495. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.pallidum:86

A8HP61              	100.00%		D3B3D4              	100.00%
A8I8X0              	6.94%		
Bootstrap support for A8HP61 as seed ortholog is 100%.
Bootstrap support for D3B3D4 as seed ortholog is 100%.

Group of orthologs #1496. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:9 P.pallidum:86

A8IJL5              	100.00%		D3BC72              	100.00%
A8IS91              	6.93%		
Bootstrap support for A8IJL5 as seed ortholog is 60%.
Alternative seed ortholog is A8I9J9 (9 bits away from this cluster)
Bootstrap support for D3BC72 as seed ortholog is 100%.

Group of orthologs #1497. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.pallidum:86

Q9SWQ6              	100.00%		D3BP63              	100.00%
A8IY95              	8.33%		
Bootstrap support for Q9SWQ6 as seed ortholog is 100%.
Bootstrap support for D3BP63 as seed ortholog is 100%.

Group of orthologs #1498. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.pallidum:86

A8HPV7              	100.00%		D3BFK4              	100.00%
Bootstrap support for A8HPV7 as seed ortholog is 100%.
Bootstrap support for D3BFK4 as seed ortholog is 100%.

Group of orthologs #1499. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.pallidum:86

A8HNG2              	100.00%		D3BQ31              	100.00%
Bootstrap support for A8HNG2 as seed ortholog is 100%.
Bootstrap support for D3BQ31 as seed ortholog is 100%.

Group of orthologs #1500. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.pallidum:86

A8I1P7              	100.00%		D3BLI5              	100.00%
Bootstrap support for A8I1P7 as seed ortholog is 100%.
Bootstrap support for D3BLI5 as seed ortholog is 100%.

Group of orthologs #1501. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.pallidum:27

Q84QJ2              	100.00%		D3B406              	100.00%
Bootstrap support for Q84QJ2 as seed ortholog is 100%.
Bootstrap support for D3B406 as seed ortholog is 78%.

Group of orthologs #1502. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.pallidum:86

Q8GUQ9              	100.00%		D3B4V8              	100.00%
Bootstrap support for Q8GUQ9 as seed ortholog is 100%.
Bootstrap support for D3B4V8 as seed ortholog is 100%.

Group of orthologs #1503. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.pallidum:86

A8J213              	100.00%		D3BQH9              	100.00%
Bootstrap support for A8J213 as seed ortholog is 100%.
Bootstrap support for D3BQH9 as seed ortholog is 100%.

Group of orthologs #1504. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 P.pallidum:86

A8J6T1              	100.00%		D3BMA2              	100.00%
Bootstrap support for A8J6T1 as seed ortholog is 93%.
Bootstrap support for D3BMA2 as seed ortholog is 100%.

Group of orthologs #1505. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.pallidum:86

A8J5R2              	100.00%		D3BQ25              	100.00%
Bootstrap support for A8J5R2 as seed ortholog is 100%.
Bootstrap support for D3BQ25 as seed ortholog is 100%.

Group of orthologs #1506. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:22 P.pallidum:85

A8I8N0              	100.00%		D3AX05              	100.00%
A8IL71              	11.34%		
Bootstrap support for A8I8N0 as seed ortholog is 75%.
Bootstrap support for D3AX05 as seed ortholog is 100%.

Group of orthologs #1507. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 P.pallidum:85

A8JEQ2              	100.00%		D3BPZ9              	100.00%
A8IQK4              	6.95%		
Bootstrap support for A8JEQ2 as seed ortholog is 81%.
Bootstrap support for D3BPZ9 as seed ortholog is 100%.

Group of orthologs #1508. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 P.pallidum:85

A8HWZ6              	100.00%		D3B416              	100.00%
Bootstrap support for A8HWZ6 as seed ortholog is 100%.
Bootstrap support for D3B416 as seed ortholog is 100%.

Group of orthologs #1509. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 P.pallidum:85

A8IQR6              	100.00%		D3B9X9              	100.00%
Bootstrap support for A8IQR6 as seed ortholog is 100%.
Bootstrap support for D3B9X9 as seed ortholog is 100%.

Group of orthologs #1510. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 P.pallidum:85

A8IXS9              	100.00%		D3B912              	100.00%
Bootstrap support for A8IXS9 as seed ortholog is 100%.
Bootstrap support for D3B912 as seed ortholog is 100%.

Group of orthologs #1511. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 P.pallidum:85

A8IEX6              	100.00%		D3BMR8              	100.00%
Bootstrap support for A8IEX6 as seed ortholog is 100%.
Bootstrap support for D3BMR8 as seed ortholog is 100%.

Group of orthologs #1512. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.pallidum:84

O22448              	27.50%		D3BR00              	100.00%
A8IWW7              	100.00%		D3BR01              	100.00%
P83564              	21.25%		
A8IIG3              	11.56%		
Bootstrap support for A8IWW7 as seed ortholog is 100%.
Bootstrap support for D3BR00 as seed ortholog is 100%.
Bootstrap support for D3BR01 as seed ortholog is 100%.

Group of orthologs #1513. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.pallidum:25

A8I7G7              	100.00%		D3BIU9              	100.00%
                    	       		D3BFG1              	75.35%
Bootstrap support for A8I7G7 as seed ortholog is 100%.
Bootstrap support for D3BIU9 as seed ortholog is 73%.
Alternative seed ortholog is D3BDB7 (25 bits away from this cluster)

Group of orthologs #1514. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.pallidum:84

A8JII8              	100.00%		D3AZR0              	100.00%
A8J9G7              	8.90%		
Bootstrap support for A8JII8 as seed ortholog is 100%.
Bootstrap support for D3AZR0 as seed ortholog is 100%.

Group of orthologs #1515. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.pallidum:84

A8IML7              	100.00%		D3AWC8              	100.00%
Bootstrap support for A8IML7 as seed ortholog is 100%.
Bootstrap support for D3AWC8 as seed ortholog is 100%.

Group of orthologs #1516. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.pallidum:84

A8IY15              	100.00%		D3B3S4              	100.00%
Bootstrap support for A8IY15 as seed ortholog is 100%.
Bootstrap support for D3B3S4 as seed ortholog is 100%.

Group of orthologs #1517. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.pallidum:84

A8IJG5              	100.00%		D3BEE9              	100.00%
Bootstrap support for A8IJG5 as seed ortholog is 100%.
Bootstrap support for D3BEE9 as seed ortholog is 100%.

Group of orthologs #1518. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.pallidum:84

A8JB43              	100.00%		D3AYJ4              	100.00%
Bootstrap support for A8JB43 as seed ortholog is 100%.
Bootstrap support for D3AYJ4 as seed ortholog is 100%.

Group of orthologs #1519. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.pallidum:84

A8J2P4              	100.00%		D3B733              	100.00%
Bootstrap support for A8J2P4 as seed ortholog is 100%.
Bootstrap support for D3B733 as seed ortholog is 100%.

Group of orthologs #1520. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:17 P.pallidum:84

A8JDG4              	100.00%		D3B4D7              	100.00%
Bootstrap support for A8JDG4 as seed ortholog is 69%.
Alternative seed ortholog is A8HVY8 (17 bits away from this cluster)
Bootstrap support for D3B4D7 as seed ortholog is 100%.

Group of orthologs #1521. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 P.pallidum:24

A8IYY5              	100.00%		D3BMX7              	100.00%
A8J4D3              	100.00%		
A8IZ00              	53.54%		
Bootstrap support for A8IYY5 as seed ortholog is 100%.
Bootstrap support for A8J4D3 as seed ortholog is 100%.
Bootstrap support for D3BMX7 as seed ortholog is 56%.
Alternative seed ortholog is D3BE64 (24 bits away from this cluster)

Group of orthologs #1522. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:12 P.pallidum:83

A8J2G7              	100.00%		D3AYJ3              	100.00%
Bootstrap support for A8J2G7 as seed ortholog is 66%.
Alternative seed ortholog is A8IA96 (12 bits away from this cluster)
Bootstrap support for D3AYJ3 as seed ortholog is 100%.

Group of orthologs #1523. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 P.pallidum:83

A8JF66              	100.00%		D3B356              	100.00%
Bootstrap support for A8JF66 as seed ortholog is 100%.
Bootstrap support for D3B356 as seed ortholog is 100%.

Group of orthologs #1524. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 P.pallidum:83

A8J0W3              	100.00%		D3BPJ5              	100.00%
Bootstrap support for A8J0W3 as seed ortholog is 100%.
Bootstrap support for D3BPJ5 as seed ortholog is 100%.

Group of orthologs #1525. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 P.pallidum:83

A8J0D6              	100.00%		D3BSZ7              	100.00%
Bootstrap support for A8J0D6 as seed ortholog is 100%.
Bootstrap support for D3BSZ7 as seed ortholog is 100%.

Group of orthologs #1526. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:11 P.pallidum:82

Q7XJ66              	100.00%		D3BGY8              	100.00%
Q84XW3              	40.86%		
A8HN02              	19.86%		
A8JFB4              	18.57%		
Bootstrap support for Q7XJ66 as seed ortholog is 67%.
Alternative seed ortholog is A8I424 (11 bits away from this cluster)
Bootstrap support for D3BGY8 as seed ortholog is 100%.

Group of orthologs #1527. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:15 P.pallidum:82

A8HP58              	100.00%		D3BAT7              	100.00%
Q84XS2              	7.07%		
Q84XR9              	6.06%		
Bootstrap support for A8HP58 as seed ortholog is 79%.
Bootstrap support for D3BAT7 as seed ortholog is 100%.

Group of orthologs #1528. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 P.pallidum:82

A8J3A8              	100.00%		D3BI32              	100.00%
A8J3A7              	53.57%		
Bootstrap support for A8J3A8 as seed ortholog is 87%.
Bootstrap support for D3BI32 as seed ortholog is 100%.

Group of orthologs #1529. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.pallidum:82

A8I4U4              	100.00%		D3BAZ2              	100.00%
Bootstrap support for A8I4U4 as seed ortholog is 100%.
Bootstrap support for D3BAZ2 as seed ortholog is 100%.

Group of orthologs #1530. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.pallidum:82

A8HYJ1              	100.00%		D3BRP8              	100.00%
Bootstrap support for A8HYJ1 as seed ortholog is 100%.
Bootstrap support for D3BRP8 as seed ortholog is 100%.

Group of orthologs #1531. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.pallidum:82

A8J908              	100.00%		D3B3N0              	100.00%
Bootstrap support for A8J908 as seed ortholog is 100%.
Bootstrap support for D3B3N0 as seed ortholog is 100%.

Group of orthologs #1532. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.pallidum:82

A8IVE8              	100.00%		D3BJR6              	100.00%
Bootstrap support for A8IVE8 as seed ortholog is 100%.
Bootstrap support for D3BJR6 as seed ortholog is 100%.

Group of orthologs #1533. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.pallidum:82

A8J1X2              	100.00%		D3BF45              	100.00%
Bootstrap support for A8J1X2 as seed ortholog is 100%.
Bootstrap support for D3BF45 as seed ortholog is 100%.

Group of orthologs #1534. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.pallidum:82

A8IXG3              	100.00%		D3BK43              	100.00%
Bootstrap support for A8IXG3 as seed ortholog is 100%.
Bootstrap support for D3BK43 as seed ortholog is 100%.

Group of orthologs #1535. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.pallidum:82

A8J6D8              	100.00%		D3BEP8              	100.00%
Bootstrap support for A8J6D8 as seed ortholog is 100%.
Bootstrap support for D3BEP8 as seed ortholog is 100%.

Group of orthologs #1536. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.pallidum:82

A8JGY0              	100.00%		D3BM22              	100.00%
Bootstrap support for A8JGY0 as seed ortholog is 100%.
Bootstrap support for D3BM22 as seed ortholog is 100%.

Group of orthologs #1537. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.pallidum:82

Q8L439              	100.00%		D3BSK2              	100.00%
Bootstrap support for Q8L439 as seed ortholog is 100%.
Bootstrap support for D3BSK2 as seed ortholog is 100%.

Group of orthologs #1538. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.pallidum:81

A8JEQ6              	100.00%		D3BF96              	100.00%
A8J9V4              	37.99%		D3B8X7              	38.69%
A8J9V5              	29.05%		
A8IAD3              	18.09%		
A8JC20              	16.08%		
Bootstrap support for A8JEQ6 as seed ortholog is 100%.
Bootstrap support for D3BF96 as seed ortholog is 100%.

Group of orthologs #1539. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.pallidum:81

A8I2Q4              	100.00%		D3B2R5              	100.00%
A8I2Q6              	90.82%		
A8JJP0              	89.33%		
A8JKB0              	52.11%		
A8JJN9              	43.18%		
Bootstrap support for A8I2Q4 as seed ortholog is 100%.
Bootstrap support for D3B2R5 as seed ortholog is 100%.

Group of orthologs #1540. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.pallidum:29

A8IZX6              	100.00%		D3BKD3              	100.00%
A8IZX5              	35.97%		D3BNB6              	5.59%
Bootstrap support for A8IZX6 as seed ortholog is 100%.
Bootstrap support for D3BKD3 as seed ortholog is 84%.

Group of orthologs #1541. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.pallidum:81

A8IIA0              	100.00%		D3B0I7              	100.00%
Bootstrap support for A8IIA0 as seed ortholog is 100%.
Bootstrap support for D3B0I7 as seed ortholog is 100%.

Group of orthologs #1542. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.pallidum:81

A8HMU6              	100.00%		D3BHG6              	100.00%
Bootstrap support for A8HMU6 as seed ortholog is 100%.
Bootstrap support for D3BHG6 as seed ortholog is 100%.

Group of orthologs #1543. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.pallidum:81

A8I422              	100.00%		D3BCG9              	100.00%
Bootstrap support for A8I422 as seed ortholog is 100%.
Bootstrap support for D3BCG9 as seed ortholog is 100%.

Group of orthologs #1544. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:18 P.pallidum:81

A8J121              	100.00%		D3AYM4              	100.00%
Bootstrap support for A8J121 as seed ortholog is 68%.
Alternative seed ortholog is A8J281 (18 bits away from this cluster)
Bootstrap support for D3AYM4 as seed ortholog is 100%.

Group of orthologs #1545. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 P.pallidum:81

A8J9P4              	100.00%		D3B644              	100.00%
Bootstrap support for A8J9P4 as seed ortholog is 89%.
Bootstrap support for D3B644 as seed ortholog is 100%.

Group of orthologs #1546. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:25 P.pallidum:81

A8J8P9              	100.00%		D3BE12              	100.00%
Bootstrap support for A8J8P9 as seed ortholog is 72%.
Alternative seed ortholog is A8JHE6 (25 bits away from this cluster)
Bootstrap support for D3BE12 as seed ortholog is 100%.

Group of orthologs #1547. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.pallidum:23

A8HUC9              	100.00%		D3BJJ7              	100.00%
A8JDX3              	22.58%		D3B0Z2              	30.54%
                    	       		D3BDW5              	21.72%
                    	       		D3BDV5              	18.28%
                    	       		D3BCP6              	17.85%
                    	       		D3BCW5              	16.99%
                    	       		D3AZQ3              	7.74%
                    	       		D3BNK4              	7.53%
Bootstrap support for A8HUC9 as seed ortholog is 100%.
Bootstrap support for D3BJJ7 as seed ortholog is 75%.

Group of orthologs #1548. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.pallidum:80

A8J9P5              	100.00%		D3BU16              	100.00%
A8JCB8              	12.25%		D3BL06              	6.57%
A8JCB4              	8.97%		D3B1R8              	5.91%
Bootstrap support for A8J9P5 as seed ortholog is 100%.
Bootstrap support for D3BU16 as seed ortholog is 100%.

Group of orthologs #1549. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:28 P.pallidum:80

A8HUL5              	100.00%		D3AXL9              	100.00%
Bootstrap support for A8HUL5 as seed ortholog is 86%.
Bootstrap support for D3AXL9 as seed ortholog is 100%.

Group of orthologs #1550. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.pallidum:80

A8IJ05              	100.00%		D3AYT2              	100.00%
Bootstrap support for A8IJ05 as seed ortholog is 100%.
Bootstrap support for D3AYT2 as seed ortholog is 100%.

Group of orthologs #1551. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.pallidum:80

A8IUP0              	100.00%		D3B3P7              	100.00%
Bootstrap support for A8IUP0 as seed ortholog is 100%.
Bootstrap support for D3B3P7 as seed ortholog is 100%.

Group of orthologs #1552. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.pallidum:79

A8J032              	100.00%		D3BQH6              	100.00%
                    	       		D3BE69              	25.65%
                    	       		D3B3Y6              	23.95%
                    	       		D3AZ97              	18.87%
Bootstrap support for A8J032 as seed ortholog is 100%.
Bootstrap support for D3BQH6 as seed ortholog is 100%.

Group of orthologs #1553. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.pallidum:79

A8IR64              	100.00%		D3BD69              	100.00%
                    	       		D3BEX3              	7.32%
Bootstrap support for A8IR64 as seed ortholog is 100%.
Bootstrap support for D3BD69 as seed ortholog is 100%.

Group of orthologs #1554. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.pallidum:29

A8J5B8              	100.00%		D3B834              	100.00%
                    	       		D3BNG4              	6.66%
Bootstrap support for A8J5B8 as seed ortholog is 100%.
Bootstrap support for D3B834 as seed ortholog is 77%.

Group of orthologs #1555. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:34 P.pallidum:79

A8J2K2              	100.00%		D3BUZ0              	100.00%
                    	       		D3B8S3              	5.20%
Bootstrap support for A8J2K2 as seed ortholog is 89%.
Bootstrap support for D3BUZ0 as seed ortholog is 100%.

Group of orthologs #1556. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.pallidum:79

A8HPE2              	100.00%		D3B788              	100.00%
Bootstrap support for A8HPE2 as seed ortholog is 100%.
Bootstrap support for D3B788 as seed ortholog is 100%.

Group of orthologs #1557. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:29 P.pallidum:79

A8IJ98              	100.00%		D3B1P7              	100.00%
Bootstrap support for A8IJ98 as seed ortholog is 85%.
Bootstrap support for D3B1P7 as seed ortholog is 100%.

Group of orthologs #1558. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.pallidum:79

A8HV34              	100.00%		D3BE66              	100.00%
Bootstrap support for A8HV34 as seed ortholog is 100%.
Bootstrap support for D3BE66 as seed ortholog is 100%.

Group of orthologs #1559. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.pallidum:79

A8INU5              	100.00%		D3B8C2              	100.00%
Bootstrap support for A8INU5 as seed ortholog is 100%.
Bootstrap support for D3B8C2 as seed ortholog is 100%.

Group of orthologs #1560. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.pallidum:79

A8J173              	100.00%		D3B6X7              	100.00%
Bootstrap support for A8J173 as seed ortholog is 100%.
Bootstrap support for D3B6X7 as seed ortholog is 100%.

Group of orthologs #1561. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.pallidum:79

A8J1C2              	100.00%		D3BAB3              	100.00%
Bootstrap support for A8J1C2 as seed ortholog is 100%.
Bootstrap support for D3BAB3 as seed ortholog is 100%.

Group of orthologs #1562. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.pallidum:79

A8J8Z6              	100.00%		D3B5H2              	100.00%
Bootstrap support for A8J8Z6 as seed ortholog is 100%.
Bootstrap support for D3B5H2 as seed ortholog is 100%.

Group of orthologs #1563. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:34 P.pallidum:79

Q6UKY4              	100.00%		D3AVK7              	100.00%
Bootstrap support for Q6UKY4 as seed ortholog is 98%.
Bootstrap support for D3AVK7 as seed ortholog is 100%.

Group of orthologs #1564. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.pallidum:79

A8IIM4              	100.00%		D3BPP5              	100.00%
Bootstrap support for A8IIM4 as seed ortholog is 100%.
Bootstrap support for D3BPP5 as seed ortholog is 100%.

Group of orthologs #1565. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.pallidum:79

A8IYC0              	100.00%		D3BNA4              	100.00%
Bootstrap support for A8IYC0 as seed ortholog is 100%.
Bootstrap support for D3BNA4 as seed ortholog is 100%.

Group of orthologs #1566. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.pallidum:79

A8JHQ6              	100.00%		D3BE40              	100.00%
Bootstrap support for A8JHQ6 as seed ortholog is 100%.
Bootstrap support for D3BE40 as seed ortholog is 100%.

Group of orthologs #1567. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.pallidum:79

A8JG77              	100.00%		D3BQB1              	100.00%
Bootstrap support for A8JG77 as seed ortholog is 100%.
Bootstrap support for D3BQB1 as seed ortholog is 100%.

Group of orthologs #1568. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 P.pallidum:78

A8JGZ6              	100.00%		D3BG92              	100.00%
A8IZW4              	7.49%		D3AYF4              	6.63%
A8JBW2              	6.25%		
A8JF93              	5.89%		
Bootstrap support for A8JGZ6 as seed ortholog is 100%.
Bootstrap support for D3BG92 as seed ortholog is 100%.

Group of orthologs #1569. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 P.pallidum:78

A8IZ48              	100.00%		D3AY40              	100.00%
Bootstrap support for A8IZ48 as seed ortholog is 100%.
Bootstrap support for D3AY40 as seed ortholog is 100%.

Group of orthologs #1570. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 P.pallidum:78

A8HW92              	100.00%		D3BFN4              	100.00%
Bootstrap support for A8HW92 as seed ortholog is 100%.
Bootstrap support for D3BFN4 as seed ortholog is 100%.

Group of orthologs #1571. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 P.pallidum:78

A8J2W4              	100.00%		D3AWW9              	100.00%
Bootstrap support for A8J2W4 as seed ortholog is 100%.
Bootstrap support for D3AWW9 as seed ortholog is 100%.

Group of orthologs #1572. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 P.pallidum:78

A8I2C0              	100.00%		D3BIG1              	100.00%
Bootstrap support for A8I2C0 as seed ortholog is 100%.
Bootstrap support for D3BIG1 as seed ortholog is 100%.

Group of orthologs #1573. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 P.pallidum:78

A8ICC6              	100.00%		D3BGP2              	100.00%
Bootstrap support for A8ICC6 as seed ortholog is 100%.
Bootstrap support for D3BGP2 as seed ortholog is 100%.

Group of orthologs #1574. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:34 P.pallidum:77

A8JEK5              	100.00%		D3B326              	100.00%
                    	       		D3B330              	56.73%
                    	       		D3B327              	47.12%
                    	       		D3AWG1              	8.17%
Bootstrap support for A8JEK5 as seed ortholog is 93%.
Bootstrap support for D3B326 as seed ortholog is 100%.

Group of orthologs #1575. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.pallidum:77

A8HQW1              	100.00%		D3B1N1              	100.00%
Bootstrap support for A8HQW1 as seed ortholog is 100%.
Bootstrap support for D3B1N1 as seed ortholog is 100%.

Group of orthologs #1576. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.pallidum:77

A8HSF6              	100.00%		D3B3Q2              	100.00%
Bootstrap support for A8HSF6 as seed ortholog is 100%.
Bootstrap support for D3B3Q2 as seed ortholog is 100%.

Group of orthologs #1577. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:11 P.pallidum:77

A8IFM3              	100.00%		D3B7P8              	100.00%
Bootstrap support for A8IFM3 as seed ortholog is 63%.
Alternative seed ortholog is A8ISF1 (11 bits away from this cluster)
Bootstrap support for D3B7P8 as seed ortholog is 100%.

Group of orthologs #1578. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.pallidum:77

A8I788              	100.00%		D3BKP1              	100.00%
Bootstrap support for A8I788 as seed ortholog is 100%.
Bootstrap support for D3BKP1 as seed ortholog is 100%.

Group of orthologs #1579. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.pallidum:77

A8J1D5              	100.00%		D3BGE7              	100.00%
Bootstrap support for A8J1D5 as seed ortholog is 100%.
Bootstrap support for D3BGE7 as seed ortholog is 100%.

Group of orthologs #1580. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.pallidum:77

A8J3P4              	100.00%		D3BKA8              	100.00%
Bootstrap support for A8J3P4 as seed ortholog is 100%.
Bootstrap support for D3BKA8 as seed ortholog is 100%.

Group of orthologs #1581. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:21 P.pallidum:17

Q84XS0              	100.00%		D3B6I2              	100.00%
Bootstrap support for Q84XS0 as seed ortholog is 85%.
Bootstrap support for D3B6I2 as seed ortholog is 80%.

Group of orthologs #1582. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.pallidum:77

A8JH74              	100.00%		D3BQV3              	100.00%
Bootstrap support for A8JH74 as seed ortholog is 100%.
Bootstrap support for D3BQV3 as seed ortholog is 100%.

Group of orthologs #1583. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.pallidum:76

A8IXR0              	100.00%		D3BAA5              	100.00%
A8IXR2              	26.82%		
Bootstrap support for A8IXR0 as seed ortholog is 100%.
Bootstrap support for D3BAA5 as seed ortholog is 100%.

Group of orthologs #1584. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.pallidum:76

A8HMQ9              	100.00%		D3B4A4              	100.00%
Bootstrap support for A8HMQ9 as seed ortholog is 100%.
Bootstrap support for D3B4A4 as seed ortholog is 100%.

Group of orthologs #1585. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.pallidum:76

A8J3F6              	100.00%		D3AY65              	100.00%
Bootstrap support for A8J3F6 as seed ortholog is 100%.
Bootstrap support for D3AY65 as seed ortholog is 100%.

Group of orthologs #1586. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.pallidum:76

A8IW57              	100.00%		D3B6T9              	100.00%
Bootstrap support for A8IW57 as seed ortholog is 100%.
Bootstrap support for D3B6T9 as seed ortholog is 100%.

Group of orthologs #1587. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.pallidum:76

A8IQE3              	100.00%		D3BCT9              	100.00%
Bootstrap support for A8IQE3 as seed ortholog is 100%.
Bootstrap support for D3BCT9 as seed ortholog is 100%.

Group of orthologs #1588. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.pallidum:76

A8J093              	100.00%		D3B7X8              	100.00%
Bootstrap support for A8J093 as seed ortholog is 100%.
Bootstrap support for D3B7X8 as seed ortholog is 100%.

Group of orthologs #1589. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.pallidum:76

A8JC08              	100.00%		D3B1H2              	100.00%
Bootstrap support for A8JC08 as seed ortholog is 100%.
Bootstrap support for D3B1H2 as seed ortholog is 100%.

Group of orthologs #1590. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.pallidum:76

A8J191              	100.00%		D3BBS9              	100.00%
Bootstrap support for A8J191 as seed ortholog is 100%.
Bootstrap support for D3BBS9 as seed ortholog is 100%.

Group of orthologs #1591. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.pallidum:76

A8JF05              	100.00%		D3B641              	100.00%
Bootstrap support for A8JF05 as seed ortholog is 100%.
Bootstrap support for D3B641 as seed ortholog is 100%.

Group of orthologs #1592. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:21 P.pallidum:10

A8JC71              	100.00%		D3BBG4              	100.00%
Bootstrap support for A8JC71 as seed ortholog is 78%.
Bootstrap support for D3BBG4 as seed ortholog is 57%.
Alternative seed ortholog is D3B696 (10 bits away from this cluster)

Group of orthologs #1593. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 P.pallidum:75

A8IDN1              	100.00%		D3BPK0              	100.00%
Bootstrap support for A8IDN1 as seed ortholog is 100%.
Bootstrap support for D3BPK0 as seed ortholog is 100%.

Group of orthologs #1594. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 P.pallidum:75

A8JFP4              	100.00%		D3BAT8              	100.00%
Bootstrap support for A8JFP4 as seed ortholog is 100%.
Bootstrap support for D3BAT8 as seed ortholog is 100%.

Group of orthologs #1595. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:11 P.pallidum:74

A8HXF2              	100.00%		D3BIK0              	100.00%
Bootstrap support for A8HXF2 as seed ortholog is 64%.
Alternative seed ortholog is A8I4H7 (11 bits away from this cluster)
Bootstrap support for D3BIK0 as seed ortholog is 100%.

Group of orthologs #1596. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.pallidum:74

A8JD88              	100.00%		D3B3Z8              	100.00%
Bootstrap support for A8JD88 as seed ortholog is 100%.
Bootstrap support for D3B3Z8 as seed ortholog is 100%.

Group of orthologs #1597. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.pallidum:74

A8IHB6              	100.00%		D3BSQ4              	100.00%
Bootstrap support for A8IHB6 as seed ortholog is 100%.
Bootstrap support for D3BSQ4 as seed ortholog is 100%.

Group of orthologs #1598. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.pallidum:74

A8JBV9              	100.00%		D3BFE9              	100.00%
Bootstrap support for A8JBV9 as seed ortholog is 100%.
Bootstrap support for D3BFE9 as seed ortholog is 100%.

Group of orthologs #1599. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.pallidum:74

A8J5A5              	100.00%		D3BP71              	100.00%
Bootstrap support for A8J5A5 as seed ortholog is 100%.
Bootstrap support for D3BP71 as seed ortholog is 100%.

Group of orthologs #1600. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.pallidum:73

A8HRS8              	100.00%		D3AWW2              	100.00%
Bootstrap support for A8HRS8 as seed ortholog is 100%.
Bootstrap support for D3AWW2 as seed ortholog is 100%.

Group of orthologs #1601. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.pallidum:73

A8HQH0              	100.00%		D3B5S8              	100.00%
Bootstrap support for A8HQH0 as seed ortholog is 100%.
Bootstrap support for D3B5S8 as seed ortholog is 100%.

Group of orthologs #1602. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.pallidum:73

A8IYX5              	100.00%		D3B353              	100.00%
Bootstrap support for A8IYX5 as seed ortholog is 100%.
Bootstrap support for D3B353 as seed ortholog is 100%.

Group of orthologs #1603. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.pallidum:73

A8IX57              	100.00%		D3BE63              	100.00%
Bootstrap support for A8IX57 as seed ortholog is 100%.
Bootstrap support for D3BE63 as seed ortholog is 100%.

Group of orthologs #1604. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.pallidum:73

A8JG36              	100.00%		D3B7W9              	100.00%
Bootstrap support for A8JG36 as seed ortholog is 100%.
Bootstrap support for D3B7W9 as seed ortholog is 100%.

Group of orthologs #1605. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.pallidum:73

A8JH64              	100.00%		D3BDS4              	100.00%
Bootstrap support for A8JH64 as seed ortholog is 100%.
Bootstrap support for D3BDS4 as seed ortholog is 100%.

Group of orthologs #1606. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.pallidum:72

A8HYJ4              	100.00%		D3B604              	100.00%
Bootstrap support for A8HYJ4 as seed ortholog is 100%.
Bootstrap support for D3B604 as seed ortholog is 100%.

Group of orthologs #1607. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.pallidum:72

A8ILS2              	100.00%		D3B637              	100.00%
Bootstrap support for A8ILS2 as seed ortholog is 100%.
Bootstrap support for D3B637 as seed ortholog is 100%.

Group of orthologs #1608. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.pallidum:72

A8J2M2              	100.00%		D3AZD1              	100.00%
Bootstrap support for A8J2M2 as seed ortholog is 100%.
Bootstrap support for D3AZD1 as seed ortholog is 100%.

Group of orthologs #1609. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.pallidum:72

A8J0L6              	100.00%		D3B4J9              	100.00%
Bootstrap support for A8J0L6 as seed ortholog is 100%.
Bootstrap support for D3B4J9 as seed ortholog is 100%.

Group of orthologs #1610. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.pallidum:72

A8IJY1              	100.00%		D3BKZ5              	100.00%
Bootstrap support for A8IJY1 as seed ortholog is 100%.
Bootstrap support for D3BKZ5 as seed ortholog is 100%.

Group of orthologs #1611. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.pallidum:72

A8J6E6              	100.00%		D3BBB0              	100.00%
Bootstrap support for A8J6E6 as seed ortholog is 100%.
Bootstrap support for D3BBB0 as seed ortholog is 100%.

Group of orthologs #1612. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.pallidum:11

A8IYR0              	100.00%		D3BRL9              	100.00%
Bootstrap support for A8IYR0 as seed ortholog is 100%.
Bootstrap support for D3BRL9 as seed ortholog is 59%.
Alternative seed ortholog is D3BML6 (11 bits away from this cluster)

Group of orthologs #1613. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.pallidum:72

A8JGB5              	100.00%		D3BAK4              	100.00%
Bootstrap support for A8JGB5 as seed ortholog is 100%.
Bootstrap support for D3BAK4 as seed ortholog is 100%.

Group of orthologs #1614. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.pallidum:71

A8J2S8              	100.00%		D3BQI9              	100.00%
                    	       		D3BQI2              	82.65%
                    	       		D3B7M7              	26.97%
                    	       		D3AW53              	26.50%
                    	       		D3B8L2              	25.55%
                    	       		D3BTF2              	25.39%
                    	       		D3B082              	23.19%
                    	       		D3BBB9              	22.40%
                    	       		D3BBB7              	22.08%
                    	       		D3B3Z1              	21.61%
                    	       		D3BB33              	20.50%
                    	       		D3B9L2              	19.09%
                    	       		D3AZY9              	15.62%
                    	       		D3B078              	9.31%
Bootstrap support for A8J2S8 as seed ortholog is 100%.
Bootstrap support for D3BQI9 as seed ortholog is 100%.

Group of orthologs #1615. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.pallidum:71

A8IKZ7              	100.00%		D3B549              	100.00%
                    	       		D3BGM2              	36.43%
Bootstrap support for A8IKZ7 as seed ortholog is 100%.
Bootstrap support for D3B549 as seed ortholog is 100%.

Group of orthologs #1616. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.pallidum:71

A8HY57              	100.00%		D3AXF0              	100.00%
Bootstrap support for A8HY57 as seed ortholog is 100%.
Bootstrap support for D3AXF0 as seed ortholog is 100%.

Group of orthologs #1617. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.pallidum:71

A8IL11              	100.00%		D3B712              	100.00%
Bootstrap support for A8IL11 as seed ortholog is 100%.
Bootstrap support for D3B712 as seed ortholog is 100%.

Group of orthologs #1618. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.pallidum:71

A8IBG1              	100.00%		D3BD34              	100.00%
Bootstrap support for A8IBG1 as seed ortholog is 100%.
Bootstrap support for D3BD34 as seed ortholog is 100%.

Group of orthologs #1619. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.pallidum:71

A8HX68              	100.00%		D3BIL0              	100.00%
Bootstrap support for A8HX68 as seed ortholog is 100%.
Bootstrap support for D3BIL0 as seed ortholog is 100%.

Group of orthologs #1620. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.pallidum:71

A8HSU4              	100.00%		D3BQ53              	100.00%
Bootstrap support for A8HSU4 as seed ortholog is 100%.
Bootstrap support for D3BQ53 as seed ortholog is 100%.

Group of orthologs #1621. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.pallidum:71

A8J2F0              	100.00%		D3B4Y3              	100.00%
Bootstrap support for A8J2F0 as seed ortholog is 100%.
Bootstrap support for D3B4Y3 as seed ortholog is 100%.

Group of orthologs #1622. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:29 P.pallidum:71

A8IYR6              	100.00%		D3BJA4              	100.00%
Bootstrap support for A8IYR6 as seed ortholog is 85%.
Bootstrap support for D3BJA4 as seed ortholog is 100%.

Group of orthologs #1623. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:26 P.pallidum:71

A8IYH5              	100.00%		D3BK14              	100.00%
Bootstrap support for A8IYH5 as seed ortholog is 73%.
Alternative seed ortholog is A8IBF9 (26 bits away from this cluster)
Bootstrap support for D3BK14 as seed ortholog is 100%.

Group of orthologs #1624. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.pallidum:71

A8IXJ2              	100.00%		D3BQB8              	100.00%
Bootstrap support for A8IXJ2 as seed ortholog is 100%.
Bootstrap support for D3BQB8 as seed ortholog is 100%.

Group of orthologs #1625. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.pallidum:71

A8JBG1              	100.00%		D3BKD2              	100.00%
Bootstrap support for A8JBG1 as seed ortholog is 100%.
Bootstrap support for D3BKD2 as seed ortholog is 100%.

Group of orthologs #1626. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.pallidum:71

A8J763              	100.00%		D3BRU0              	100.00%
Bootstrap support for A8J763 as seed ortholog is 100%.
Bootstrap support for D3BRU0 as seed ortholog is 100%.

Group of orthologs #1627. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.pallidum:71

A8JHU2              	100.00%		D3BH64              	100.00%
Bootstrap support for A8JHU2 as seed ortholog is 100%.
Bootstrap support for D3BH64 as seed ortholog is 100%.

Group of orthologs #1628. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.pallidum:70

A8J352              	100.00%		D3AVZ8              	100.00%
Bootstrap support for A8J352 as seed ortholog is 100%.
Bootstrap support for D3AVZ8 as seed ortholog is 100%.

Group of orthologs #1629. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.pallidum:70

A8JFK9              	100.00%		D3BAA6              	100.00%
Bootstrap support for A8JFK9 as seed ortholog is 100%.
Bootstrap support for D3BAA6 as seed ortholog is 100%.

Group of orthologs #1630. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.pallidum:69

A8HND1              	100.00%		D3BPK2              	100.00%
Q9AXF7              	5.08%		
Bootstrap support for A8HND1 as seed ortholog is 100%.
Bootstrap support for D3BPK2 as seed ortholog is 100%.

Group of orthologs #1631. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.pallidum:69

A8I9X2              	100.00%		D3B1G8              	100.00%
Bootstrap support for A8I9X2 as seed ortholog is 100%.
Bootstrap support for D3B1G8 as seed ortholog is 100%.

Group of orthologs #1632. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.pallidum:69

A8I439              	100.00%		D3B5U8              	100.00%
Bootstrap support for A8I439 as seed ortholog is 100%.
Bootstrap support for D3B5U8 as seed ortholog is 100%.

Group of orthologs #1633. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.pallidum:69

A8I0B6              	100.00%		D3B7Y4              	100.00%
Bootstrap support for A8I0B6 as seed ortholog is 100%.
Bootstrap support for D3B7Y4 as seed ortholog is 100%.

Group of orthologs #1634. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.pallidum:69

A8IY09              	100.00%		D3AXR3              	100.00%
Bootstrap support for A8IY09 as seed ortholog is 100%.
Bootstrap support for D3AXR3 as seed ortholog is 100%.

Group of orthologs #1635. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.pallidum:69

A8IX19              	100.00%		D3BTV3              	100.00%
Bootstrap support for A8IX19 as seed ortholog is 100%.
Bootstrap support for D3BTV3 as seed ortholog is 100%.

Group of orthologs #1636. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 P.pallidum:24

A8I6R6              	100.00%		D3BFW6              	100.00%
A8I6S0              	36.95%		D3B498              	8.57%
Bootstrap support for A8I6R6 as seed ortholog is 100%.
Bootstrap support for D3BFW6 as seed ortholog is 68%.
Alternative seed ortholog is D3B536 (24 bits away from this cluster)

Group of orthologs #1637. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 P.pallidum:68

A8IYH1              	100.00%		D3BVM5              	100.00%
A8JHA9              	57.93%		
Bootstrap support for A8IYH1 as seed ortholog is 100%.
Bootstrap support for D3BVM5 as seed ortholog is 100%.

Group of orthologs #1638. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 P.pallidum:68

A8HQJ0              	100.00%		D3BJD5              	100.00%
Bootstrap support for A8HQJ0 as seed ortholog is 100%.
Bootstrap support for D3BJD5 as seed ortholog is 100%.

Group of orthologs #1639. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:16 P.pallidum:68

A8I1Y0              	100.00%		D3BMT2              	100.00%
Bootstrap support for A8I1Y0 as seed ortholog is 71%.
Alternative seed ortholog is A8JGB8 (16 bits away from this cluster)
Bootstrap support for D3BMT2 as seed ortholog is 100%.

Group of orthologs #1640. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 P.pallidum:68

A8J538              	100.00%		D3BAR1              	100.00%
Bootstrap support for A8J538 as seed ortholog is 100%.
Bootstrap support for D3BAR1 as seed ortholog is 100%.

Group of orthologs #1641. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 P.pallidum:68

A8J3E1              	100.00%		D3BE21              	100.00%
Bootstrap support for A8J3E1 as seed ortholog is 100%.
Bootstrap support for D3BE21 as seed ortholog is 100%.

Group of orthologs #1642. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 P.pallidum:68

A8J814              	100.00%		D3BBW5              	100.00%
Bootstrap support for A8J814 as seed ortholog is 100%.
Bootstrap support for D3BBW5 as seed ortholog is 100%.

Group of orthologs #1643. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:5 P.pallidum:68

A8JHU3              	100.00%		D3BVK7              	100.00%
Bootstrap support for A8JHU3 as seed ortholog is 62%.
Alternative seed ortholog is A8HRP7 (5 bits away from this cluster)
Bootstrap support for D3BVK7 as seed ortholog is 100%.

Group of orthologs #1644. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.pallidum:67

A8JGR9              	100.00%		D3B729              	100.00%
A8JGR8              	74.01%		D3B728              	58.26%
                    	       		D3B6Z5              	32.87%
                    	       		D3B706              	12.84%
                    	       		D3BJX0              	9.79%
Bootstrap support for A8JGR9 as seed ortholog is 100%.
Bootstrap support for D3B729 as seed ortholog is 100%.

Group of orthologs #1645. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.pallidum:67

A8J0P8              	100.00%		D3B401              	100.00%
A8IQ37              	25.18%		
A8J101              	10.92%		
A8J5F0              	10.39%		
A8JIH7              	7.75%		
Bootstrap support for A8J0P8 as seed ortholog is 100%.
Bootstrap support for D3B401 as seed ortholog is 100%.

Group of orthologs #1646. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.pallidum:67

A8JH36              	100.00%		D3BEB9              	100.00%
A8IMF2              	17.04%		
Bootstrap support for A8JH36 as seed ortholog is 100%.
Bootstrap support for D3BEB9 as seed ortholog is 100%.

Group of orthologs #1647. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.pallidum:67

A8ICB0              	100.00%		D3BDZ5              	100.00%
Bootstrap support for A8ICB0 as seed ortholog is 100%.
Bootstrap support for D3BDZ5 as seed ortholog is 100%.

Group of orthologs #1648. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.pallidum:67

A8J903              	100.00%		D3AYG2              	100.00%
Bootstrap support for A8J903 as seed ortholog is 100%.
Bootstrap support for D3AYG2 as seed ortholog is 100%.

Group of orthologs #1649. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.pallidum:67

A8IR04              	100.00%		D3BHV2              	100.00%
Bootstrap support for A8IR04 as seed ortholog is 100%.
Bootstrap support for D3BHV2 as seed ortholog is 100%.

Group of orthologs #1650. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.pallidum:67

A8J8A6              	100.00%		D3BAU4              	100.00%
Bootstrap support for A8J8A6 as seed ortholog is 100%.
Bootstrap support for D3BAU4 as seed ortholog is 100%.

Group of orthologs #1651. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.pallidum:67

A8J0C9              	100.00%		D3BRH6              	100.00%
Bootstrap support for A8J0C9 as seed ortholog is 100%.
Bootstrap support for D3BRH6 as seed ortholog is 100%.

Group of orthologs #1652. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.pallidum:67

A8J7J4              	100.00%		D3BQA1              	100.00%
Bootstrap support for A8J7J4 as seed ortholog is 100%.
Bootstrap support for D3BQA1 as seed ortholog is 100%.

Group of orthologs #1653. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.pallidum:67

A8JGN3              	100.00%		D3BKU9              	100.00%
Bootstrap support for A8JGN3 as seed ortholog is 100%.
Bootstrap support for D3BKU9 as seed ortholog is 100%.

Group of orthologs #1654. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.pallidum:66

A8ITV7              	100.00%		D3B871              	100.00%
A8HP47              	52.24%		
A8J0K3              	39.30%		
A8JBC5              	38.31%		
A8I3Q6              	19.40%		
A8IWU4              	12.44%		
A8J350              	9.95%		
A8HQV7              	8.46%		
A8J2R8              	5.97%		
Bootstrap support for A8ITV7 as seed ortholog is 100%.
Bootstrap support for D3B871 as seed ortholog is 100%.

Group of orthologs #1655. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.pallidum:66

Q94KS3              	100.00%		D3BLB6              	100.00%
                    	       		D3B3P0              	65.98%
                    	       		D3BLB5              	41.24%
                    	       		D3B642              	40.72%
                    	       		D3BHX0              	5.15%
Bootstrap support for Q94KS3 as seed ortholog is 100%.
Bootstrap support for D3BLB6 as seed ortholog is 100%.

Group of orthologs #1656. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.pallidum:13

A8HNQ6              	100.00%		D3BK74              	100.00%
A8HPP3              	7.64%		
A8HPN7              	5.76%		
Bootstrap support for A8HNQ6 as seed ortholog is 100%.
Bootstrap support for D3BK74 as seed ortholog is 60%.
Alternative seed ortholog is D3B5E1 (13 bits away from this cluster)

Group of orthologs #1657. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.pallidum:66

A8J265              	100.00%		D3B404              	100.00%
Bootstrap support for A8J265 as seed ortholog is 100%.
Bootstrap support for D3B404 as seed ortholog is 100%.

Group of orthologs #1658. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.pallidum:66

A8ITN4              	100.00%		D3BDM9              	100.00%
Bootstrap support for A8ITN4 as seed ortholog is 100%.
Bootstrap support for D3BDM9 as seed ortholog is 100%.

Group of orthologs #1659. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:14 P.pallidum:66

A8JHQ3              	100.00%		D3BF08              	100.00%
Bootstrap support for A8JHQ3 as seed ortholog is 83%.
Bootstrap support for D3BF08 as seed ortholog is 100%.

Group of orthologs #1660. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.pallidum:66

A8J9M8              	100.00%		D3BUV1              	100.00%
Bootstrap support for A8J9M8 as seed ortholog is 100%.
Bootstrap support for D3BUV1 as seed ortholog is 100%.

Group of orthologs #1661. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.pallidum:66

Q9LKH0              	100.00%		D3BTG7              	100.00%
Bootstrap support for Q9LKH0 as seed ortholog is 100%.
Bootstrap support for D3BTG7 as seed ortholog is 100%.

Group of orthologs #1662. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:11 P.pallidum:65

A8IH64              	100.00%		D3BHV3              	100.00%
Bootstrap support for A8IH64 as seed ortholog is 68%.
Alternative seed ortholog is A8J9D9 (11 bits away from this cluster)
Bootstrap support for D3BHV3 as seed ortholog is 100%.

Group of orthologs #1663. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.pallidum:64

A8J513              	100.00%		D3B5K9              	100.00%
A2BCY1              	21.66%		
Bootstrap support for A8J513 as seed ortholog is 100%.
Bootstrap support for D3B5K9 as seed ortholog is 100%.

Group of orthologs #1664. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.pallidum:64

A8HXW0              	100.00%		D3AZW4              	100.00%
Bootstrap support for A8HXW0 as seed ortholog is 100%.
Bootstrap support for D3AZW4 as seed ortholog is 100%.

Group of orthologs #1665. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.pallidum:64

A8HPV8              	100.00%		D3BBK8              	100.00%
Bootstrap support for A8HPV8 as seed ortholog is 100%.
Bootstrap support for D3BBK8 as seed ortholog is 100%.

Group of orthologs #1666. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.pallidum:64

A8ITP7              	100.00%		D3B1B7              	100.00%
Bootstrap support for A8ITP7 as seed ortholog is 100%.
Bootstrap support for D3B1B7 as seed ortholog is 100%.

Group of orthologs #1667. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.pallidum:64

A8IYS8              	100.00%		D3B2U2              	100.00%
Bootstrap support for A8IYS8 as seed ortholog is 100%.
Bootstrap support for D3B2U2 as seed ortholog is 100%.

Group of orthologs #1668. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.pallidum:64

A8HR64              	100.00%		D3BT59              	100.00%
Bootstrap support for A8HR64 as seed ortholog is 100%.
Bootstrap support for D3BT59 as seed ortholog is 100%.

Group of orthologs #1669. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.pallidum:64

A8JC58              	100.00%		D3B5X9              	100.00%
Bootstrap support for A8JC58 as seed ortholog is 100%.
Bootstrap support for D3B5X9 as seed ortholog is 100%.

Group of orthologs #1670. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.pallidum:64

A8IX67              	100.00%		D3BJI3              	100.00%
Bootstrap support for A8IX67 as seed ortholog is 100%.
Bootstrap support for D3BJI3 as seed ortholog is 100%.

Group of orthologs #1671. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.pallidum:63

A8HN94              	100.00%		D3B028              	100.00%
Bootstrap support for A8HN94 as seed ortholog is 100%.
Bootstrap support for D3B028 as seed ortholog is 100%.

Group of orthologs #1672. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.pallidum:63

A8IUR7              	100.00%		D3B669              	100.00%
Bootstrap support for A8IUR7 as seed ortholog is 100%.
Bootstrap support for D3B669 as seed ortholog is 100%.

Group of orthologs #1673. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:4 P.pallidum:63

A8IAI7              	100.00%		D3BED0              	100.00%
Bootstrap support for A8IAI7 as seed ortholog is 56%.
Alternative seed ortholog is A8ITP2 (4 bits away from this cluster)
Bootstrap support for D3BED0 as seed ortholog is 100%.

Group of orthologs #1674. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.pallidum:63

A8IUT6              	100.00%		D3B8P8              	100.00%
Bootstrap support for A8IUT6 as seed ortholog is 100%.
Bootstrap support for D3B8P8 as seed ortholog is 100%.

Group of orthologs #1675. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.pallidum:5

A8J820              	100.00%		D3B7F1              	100.00%
Bootstrap support for A8J820 as seed ortholog is 100%.
Bootstrap support for D3B7F1 as seed ortholog is 61%.
Alternative seed ortholog is D3BJ92 (5 bits away from this cluster)

Group of orthologs #1676. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.pallidum:63

A8JBH7              	100.00%		D3BH63              	100.00%
Bootstrap support for A8JBH7 as seed ortholog is 100%.
Bootstrap support for D3BH63 as seed ortholog is 100%.

Group of orthologs #1677. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.pallidum:63

A8JIH9              	100.00%		D3BIW4              	100.00%
Bootstrap support for A8JIH9 as seed ortholog is 100%.
Bootstrap support for D3BIW4 as seed ortholog is 100%.

Group of orthologs #1678. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.pallidum:63

Q6UP31              	100.00%		D3BHQ4              	100.00%
Bootstrap support for Q6UP31 as seed ortholog is 100%.
Bootstrap support for D3BHQ4 as seed ortholog is 100%.

Group of orthologs #1679. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.pallidum:62

A8JEX2              	100.00%		D3BFG2              	100.00%
A8IUR9              	18.43%		D3BFG3              	46.88%
A8IY98              	13.15%		
A8JBS8              	10.63%		
A8J3G0              	5.60%		
Bootstrap support for A8JEX2 as seed ortholog is 100%.
Bootstrap support for D3BFG2 as seed ortholog is 100%.

Group of orthologs #1680. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.pallidum:62

A8J1X1              	7.80%		D3B7J2              	100.00%
A8IYH3              	100.00%		D3BJL5              	100.00%
A8J163              	7.52%		
A8J165              	5.85%		
Bootstrap support for A8IYH3 as seed ortholog is 100%.
Bootstrap support for D3B7J2 as seed ortholog is 100%.
Bootstrap support for D3BJL5 as seed ortholog is 100%.

Group of orthologs #1681. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.pallidum:62

A8ISI4              	100.00%		D3AZ35              	100.00%
Bootstrap support for A8ISI4 as seed ortholog is 100%.
Bootstrap support for D3AZ35 as seed ortholog is 100%.

Group of orthologs #1682. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.pallidum:62

A8HW20              	100.00%		D3BEI4              	100.00%
Bootstrap support for A8HW20 as seed ortholog is 100%.
Bootstrap support for D3BEI4 as seed ortholog is 100%.

Group of orthologs #1683. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.pallidum:62

A8IZN9              	100.00%		D3B8T0              	100.00%
Bootstrap support for A8IZN9 as seed ortholog is 100%.
Bootstrap support for D3B8T0 as seed ortholog is 100%.

Group of orthologs #1684. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:8 P.pallidum:61

A8HQ15              	100.00%		D3BDV3              	100.00%
Bootstrap support for A8HQ15 as seed ortholog is 68%.
Alternative seed ortholog is A8I8E0 (8 bits away from this cluster)
Bootstrap support for D3BDV3 as seed ortholog is 100%.

Group of orthologs #1685. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.pallidum:61

A8I2N9              	100.00%		D3BNN0              	100.00%
Bootstrap support for A8I2N9 as seed ortholog is 100%.
Bootstrap support for D3BNN0 as seed ortholog is 100%.

Group of orthologs #1686. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.pallidum:61

A8JC02              	100.00%		D3B2N3              	100.00%
Bootstrap support for A8JC02 as seed ortholog is 100%.
Bootstrap support for D3B2N3 as seed ortholog is 100%.

Group of orthologs #1687. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.pallidum:61

Q6UKY7              	100.00%		D3BII5              	100.00%
Bootstrap support for Q6UKY7 as seed ortholog is 100%.
Bootstrap support for D3BII5 as seed ortholog is 100%.

Group of orthologs #1688. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 P.pallidum:60

A8HTT6              	100.00%		D3AY84              	100.00%
Bootstrap support for A8HTT6 as seed ortholog is 100%.
Bootstrap support for D3AY84 as seed ortholog is 100%.

Group of orthologs #1689. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 P.pallidum:60

A8IWR0              	100.00%		D3B1F7              	100.00%
Bootstrap support for A8IWR0 as seed ortholog is 100%.
Bootstrap support for D3B1F7 as seed ortholog is 100%.

Group of orthologs #1690. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 P.pallidum:60

A8HQU2              	100.00%		D3BQ07              	100.00%
Bootstrap support for A8HQU2 as seed ortholog is 100%.
Bootstrap support for D3BQ07 as seed ortholog is 100%.

Group of orthologs #1691. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 P.pallidum:60

A8IT23              	100.00%		D3BN13              	100.00%
Bootstrap support for A8IT23 as seed ortholog is 100%.
Bootstrap support for D3BN13 as seed ortholog is 100%.

Group of orthologs #1692. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 P.pallidum:60

A8JB74              	100.00%		D3BA49              	100.00%
Bootstrap support for A8JB74 as seed ortholog is 100%.
Bootstrap support for D3BA49 as seed ortholog is 100%.

Group of orthologs #1693. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 P.pallidum:60

A8J8V1              	100.00%		D3BGD1              	100.00%
Bootstrap support for A8J8V1 as seed ortholog is 100%.
Bootstrap support for D3BGD1 as seed ortholog is 100%.

Group of orthologs #1694. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.pallidum:1

A8J6S1              	100.00%		D3B513              	100.00%
A8I108              	12.01%		
A8JCA4              	7.51%		
Bootstrap support for A8J6S1 as seed ortholog is 100%.
Bootstrap support for D3B513 as seed ortholog is 56%.
Alternative seed ortholog is D3AVM4 (1 bits away from this cluster)

Group of orthologs #1695. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.pallidum:59

A8HPU2              	100.00%		D3BBK5              	100.00%
Bootstrap support for A8HPU2 as seed ortholog is 100%.
Bootstrap support for D3BBK5 as seed ortholog is 100%.

Group of orthologs #1696. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.pallidum:59

A8HPV5              	100.00%		D3BEK8              	100.00%
Bootstrap support for A8HPV5 as seed ortholog is 100%.
Bootstrap support for D3BEK8 as seed ortholog is 100%.

Group of orthologs #1697. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:15 P.pallidum:12

A8JHN2              	100.00%		D3BP84              	100.00%
Bootstrap support for A8JHN2 as seed ortholog is 74%.
Alternative seed ortholog is A8JGB8 (15 bits away from this cluster)
Bootstrap support for D3BP84 as seed ortholog is 74%.
Alternative seed ortholog is D3B1A9 (12 bits away from this cluster)

Group of orthologs #1698. Best score 58 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 P.pallidum:58

A8I501              	100.00%		D3BGW7              	100.00%
A8I3U7              	79.11%		D3AW72              	16.02%
Bootstrap support for A8I501 as seed ortholog is 100%.
Bootstrap support for D3BGW7 as seed ortholog is 100%.

Group of orthologs #1699. Best score 58 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 P.pallidum:58

A8IC32              	100.00%		D3BAV7              	100.00%
Bootstrap support for A8IC32 as seed ortholog is 100%.
Bootstrap support for D3BAV7 as seed ortholog is 100%.

Group of orthologs #1700. Best score 58 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 P.pallidum:58

A8J1I2              	100.00%		D3B3B7              	100.00%
Bootstrap support for A8J1I2 as seed ortholog is 100%.
Bootstrap support for D3B3B7 as seed ortholog is 100%.

Group of orthologs #1701. Best score 58 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 P.pallidum:58

A8JFA1              	100.00%		D3BL84              	100.00%
Bootstrap support for A8JFA1 as seed ortholog is 100%.
Bootstrap support for D3BL84 as seed ortholog is 100%.

Group of orthologs #1702. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.pallidum:57

A8IW91              	100.00%		D3BNI5              	100.00%
A8J809              	7.03%		
Bootstrap support for A8IW91 as seed ortholog is 100%.
Bootstrap support for D3BNI5 as seed ortholog is 100%.

Group of orthologs #1703. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.pallidum:1

A8JFB0              	100.00%		D3BKN5              	100.00%
                    	       		D3B4G4              	8.01%
Bootstrap support for A8JFB0 as seed ortholog is 100%.
Bootstrap support for D3BKN5 as seed ortholog is 47%.
Alternative seed ortholog is D3BIS6 (1 bits away from this cluster)

Group of orthologs #1704. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.pallidum:57

A8HQA7              	100.00%		D3BF09              	100.00%
Bootstrap support for A8HQA7 as seed ortholog is 100%.
Bootstrap support for D3BF09 as seed ortholog is 100%.

Group of orthologs #1705. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.pallidum:57

A8J5N7              	100.00%		D3AY52              	100.00%
Bootstrap support for A8J5N7 as seed ortholog is 100%.
Bootstrap support for D3AY52 as seed ortholog is 100%.

Group of orthologs #1706. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.pallidum:57

A8JIE5              	100.00%		D3B2B2              	100.00%
Bootstrap support for A8JIE5 as seed ortholog is 100%.
Bootstrap support for D3B2B2 as seed ortholog is 100%.

Group of orthologs #1707. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.pallidum:57

A8JC42              	100.00%		D3BCT7              	100.00%
Bootstrap support for A8JC42 as seed ortholog is 100%.
Bootstrap support for D3BCT7 as seed ortholog is 100%.

Group of orthologs #1708. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 P.pallidum:56

A8IVR2              	100.00%		D3B9S9              	100.00%
                    	       		D3B9F9              	5.13%
Bootstrap support for A8IVR2 as seed ortholog is 100%.
Bootstrap support for D3B9S9 as seed ortholog is 100%.

Group of orthologs #1709. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 P.pallidum:56

A8HTE8              	100.00%		D3BPM3              	100.00%
                    	       		D3BBL7              	29.98%
Bootstrap support for A8HTE8 as seed ortholog is 100%.
Bootstrap support for D3BPM3 as seed ortholog is 100%.

Group of orthologs #1710. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 P.pallidum:56

A8IJT8              	100.00%		D3BGR1              	100.00%
Bootstrap support for A8IJT8 as seed ortholog is 100%.
Bootstrap support for D3BGR1 as seed ortholog is 100%.

Group of orthologs #1711. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 P.pallidum:56

A8IZ36              	100.00%		D3BPP1              	100.00%
Bootstrap support for A8IZ36 as seed ortholog is 100%.
Bootstrap support for D3BPP1 as seed ortholog is 100%.

Group of orthologs #1712. Best score 55 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.pallidum:55

A8IWT4              	100.00%		D3AZR3              	100.00%
Bootstrap support for A8IWT4 as seed ortholog is 100%.
Bootstrap support for D3AZR3 as seed ortholog is 100%.

Group of orthologs #1713. Best score 55 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.pallidum:55

Q9FYV4              	100.00%		D3BAI6              	100.00%
Bootstrap support for Q9FYV4 as seed ortholog is 100%.
Bootstrap support for D3BAI6 as seed ortholog is 100%.

Group of orthologs #1714. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.pallidum:54

A8JHF3              	100.00%		D3BGL3              	100.00%
                    	       		D3BUM2              	35.09%
Bootstrap support for A8JHF3 as seed ortholog is 100%.
Bootstrap support for D3BGL3 as seed ortholog is 100%.

Group of orthologs #1715. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.pallidum:54

A8I7D1              	100.00%		D3B8C1              	100.00%
Bootstrap support for A8I7D1 as seed ortholog is 100%.
Bootstrap support for D3B8C1 as seed ortholog is 100%.

Group of orthologs #1716. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.pallidum:53

A8IMX2              	100.00%		D3AWF3              	100.00%
Bootstrap support for A8IMX2 as seed ortholog is 100%.
Bootstrap support for D3AWF3 as seed ortholog is 100%.

Group of orthologs #1717. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.pallidum:53

A8HRI2              	100.00%		D3BQM2              	100.00%
Bootstrap support for A8HRI2 as seed ortholog is 100%.
Bootstrap support for D3BQM2 as seed ortholog is 100%.

Group of orthologs #1718. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.pallidum:53

A8IRT1              	100.00%		D3BP65              	100.00%
Bootstrap support for A8IRT1 as seed ortholog is 100%.
Bootstrap support for D3BP65 as seed ortholog is 100%.

Group of orthologs #1719. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.pallidum:53

A8JGZ2              	100.00%		D3BFU3              	100.00%
Bootstrap support for A8JGZ2 as seed ortholog is 100%.
Bootstrap support for D3BFU3 as seed ortholog is 100%.

Group of orthologs #1720. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.pallidum:52

A8HNU7              	100.00%		D3BHK6              	100.00%
A8HNU9              	95.22%		D3B687              	35.19%
A8J2Z3              	12.20%		D3B689              	35.19%
A8HPU8              	9.81%		D3BTX0              	34.13%
                    	       		D3B692              	32.80%
Bootstrap support for A8HNU7 as seed ortholog is 100%.
Bootstrap support for D3BHK6 as seed ortholog is 100%.

Group of orthologs #1721. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.pallidum:52

A8I6C1              	100.00%		D3B7H0              	100.00%
                    	       		D3B7H1              	52.42%
                    	       		D3B7H2              	40.73%
                    	       		D3B3Y8              	16.94%
Bootstrap support for A8I6C1 as seed ortholog is 100%.
Bootstrap support for D3B7H0 as seed ortholog is 100%.

Group of orthologs #1722. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.pallidum:52

A8IAZ4              	100.00%		D3BNQ6              	100.00%
A8I311              	7.43%		
Bootstrap support for A8IAZ4 as seed ortholog is 100%.
Bootstrap support for D3BNQ6 as seed ortholog is 100%.

Group of orthologs #1723. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.pallidum:52

A8ITX5              	100.00%		D3BJW9              	100.00%
A8IFC2              	49.53%		
Bootstrap support for A8ITX5 as seed ortholog is 100%.
Bootstrap support for D3BJW9 as seed ortholog is 100%.

Group of orthologs #1724. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.pallidum:52

A8IB08              	100.00%		D3BT73              	100.00%
                    	       		D3BH37              	12.03%
Bootstrap support for A8IB08 as seed ortholog is 100%.
Bootstrap support for D3BT73 as seed ortholog is 100%.

Group of orthologs #1725. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.pallidum:52

A8J228              	100.00%		D3AYC1              	100.00%
Bootstrap support for A8J228 as seed ortholog is 100%.
Bootstrap support for D3AYC1 as seed ortholog is 100%.

Group of orthologs #1726. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.pallidum:52

Q944P3              	100.00%		D3BIZ8              	100.00%
Bootstrap support for Q944P3 as seed ortholog is 100%.
Bootstrap support for D3BIZ8 as seed ortholog is 100%.

Group of orthologs #1727. Best score 51 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 P.pallidum:51

A8J050              	100.00%		D3AVP7              	100.00%
                    	       		D3B175              	27.00%
                    	       		D3AXF6              	26.77%
                    	       		D3B176              	23.99%
                    	       		D3B390              	20.86%
Bootstrap support for A8J050 as seed ortholog is 100%.
Bootstrap support for D3AVP7 as seed ortholog is 100%.

Group of orthologs #1728. Best score 51 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 P.pallidum:51

A8IGK7              	100.00%		D3BE92              	100.00%
Bootstrap support for A8IGK7 as seed ortholog is 100%.
Bootstrap support for D3BE92 as seed ortholog is 100%.

Group of orthologs #1729. Best score 51 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 P.pallidum:51

A8JA08              	100.00%		D3AXU0              	100.00%
Bootstrap support for A8JA08 as seed ortholog is 100%.
Bootstrap support for D3AXU0 as seed ortholog is 100%.

Group of orthologs #1730. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.pallidum:50

A8IUC0              	100.00%		D3B9L3              	100.00%
A8HQP6              	17.73%		
A8JHG3              	12.06%		
Bootstrap support for A8IUC0 as seed ortholog is 100%.
Bootstrap support for D3B9L3 as seed ortholog is 100%.

Group of orthologs #1731. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.pallidum:50

A8IVY1              	100.00%		D3AW98              	100.00%
                    	       		D3BNJ4              	41.96%
Bootstrap support for A8IVY1 as seed ortholog is 100%.
Bootstrap support for D3AW98 as seed ortholog is 100%.

Group of orthologs #1732. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.pallidum:50

A8ISL0              	100.00%		D3B0D0              	100.00%
Bootstrap support for A8ISL0 as seed ortholog is 100%.
Bootstrap support for D3B0D0 as seed ortholog is 100%.

Group of orthologs #1733. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.pallidum:50

A8ID30              	100.00%		D3B8S6              	100.00%
Bootstrap support for A8ID30 as seed ortholog is 100%.
Bootstrap support for D3B8S6 as seed ortholog is 100%.

Group of orthologs #1734. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.pallidum:50

A8IYG4              	100.00%		D3B9D4              	100.00%
Bootstrap support for A8IYG4 as seed ortholog is 100%.
Bootstrap support for D3B9D4 as seed ortholog is 100%.

Group of orthologs #1735. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.pallidum:50

A8JJB2              	100.00%		D3AXS2              	100.00%
Bootstrap support for A8JJB2 as seed ortholog is 100%.
Bootstrap support for D3AXS2 as seed ortholog is 100%.

Group of orthologs #1736. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.pallidum:50

A8J5P9              	100.00%		D3BHP1              	100.00%
Bootstrap support for A8J5P9 as seed ortholog is 100%.
Bootstrap support for D3BHP1 as seed ortholog is 100%.

Group of orthologs #1737. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.pallidum:50

A8J728              	100.00%		D3BPS4              	100.00%
Bootstrap support for A8J728 as seed ortholog is 100%.
Bootstrap support for D3BPS4 as seed ortholog is 100%.

Group of orthologs #1738. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.pallidum:49

A8IU01              	100.00%		D3B3S1              	100.00%
                    	       		D3B9V4              	81.19%
                    	       		D3B9X7              	12.67%
                    	       		D3BLB7              	5.35%
Bootstrap support for A8IU01 as seed ortholog is 100%.
Bootstrap support for D3B3S1 as seed ortholog is 100%.

Group of orthologs #1739. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.pallidum:49

A8HRK6              	100.00%		D3BHR8              	100.00%
A8JF27              	100.00%		
Bootstrap support for A8HRK6 as seed ortholog is 100%.
Bootstrap support for A8JF27 as seed ortholog is 100%.
Bootstrap support for D3BHR8 as seed ortholog is 100%.

Group of orthologs #1740. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.pallidum:49

A8IX50              	100.00%		D3B8Q0              	100.00%
                    	       		D3BJ21              	10.84%
Bootstrap support for A8IX50 as seed ortholog is 100%.
Bootstrap support for D3B8Q0 as seed ortholog is 100%.

Group of orthologs #1741. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.pallidum:49

A8IRB7              	100.00%		D3BQH4              	100.00%
A8J3J7              	100.00%		
Bootstrap support for A8IRB7 as seed ortholog is 100%.
Bootstrap support for A8J3J7 as seed ortholog is 100%.
Bootstrap support for D3BQH4 as seed ortholog is 100%.

Group of orthologs #1742. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 P.pallidum:49

A8JHV1              	100.00%		D3B5D3              	100.00%
                    	       		D3BKC0              	5.95%
Bootstrap support for A8JHV1 as seed ortholog is 56%.
Alternative seed ortholog is A8I471 (3 bits away from this cluster)
Bootstrap support for D3B5D3 as seed ortholog is 100%.

Group of orthologs #1743. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.pallidum:49

A8J8J8              	100.00%		D3BJU1              	100.00%
                    	       		D3BL38              	10.33%
Bootstrap support for A8J8J8 as seed ortholog is 100%.
Bootstrap support for D3BJU1 as seed ortholog is 100%.

Group of orthologs #1744. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:4 P.pallidum:49

A8IIJ4              	100.00%		D3B0F4              	100.00%
Bootstrap support for A8IIJ4 as seed ortholog is 56%.
Alternative seed ortholog is A8I137 (4 bits away from this cluster)
Bootstrap support for D3B0F4 as seed ortholog is 100%.

Group of orthologs #1745. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.pallidum:49

A8J9C3              	100.00%		D3AWE2              	100.00%
Bootstrap support for A8J9C3 as seed ortholog is 100%.
Bootstrap support for D3AWE2 as seed ortholog is 100%.

Group of orthologs #1746. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.pallidum:49

A8IB31              	100.00%		D3BSV6              	100.00%
Bootstrap support for A8IB31 as seed ortholog is 100%.
Bootstrap support for D3BSV6 as seed ortholog is 100%.

Group of orthologs #1747. Best score 48 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.pallidum:48

A8HPF0              	100.00%		D3BCM2              	100.00%
A8HPF1              	34.87%		D3BFB1              	12.50%
Bootstrap support for A8HPF0 as seed ortholog is 100%.
Bootstrap support for D3BCM2 as seed ortholog is 100%.

Group of orthologs #1748. Best score 48 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.pallidum:48

A8HPI5              	100.00%		D3BIA5              	100.00%
A8HPI0              	42.45%		
Bootstrap support for A8HPI5 as seed ortholog is 100%.
Bootstrap support for D3BIA5 as seed ortholog is 100%.

Group of orthologs #1749. Best score 48 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.pallidum:48

A8HMD5              	100.00%		D3BI98              	100.00%
Bootstrap support for A8HMD5 as seed ortholog is 100%.
Bootstrap support for D3BI98 as seed ortholog is 100%.

Group of orthologs #1750. Best score 48 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.pallidum:48

A8HXU2              	100.00%		D3BDY9              	100.00%
Bootstrap support for A8HXU2 as seed ortholog is 100%.
Bootstrap support for D3BDY9 as seed ortholog is 100%.

Group of orthologs #1751. Best score 48 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.pallidum:48

A8IZ28              	100.00%		D3BEH1              	100.00%
Bootstrap support for A8IZ28 as seed ortholog is 100%.
Bootstrap support for D3BEH1 as seed ortholog is 100%.

Group of orthologs #1752. Best score 48 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.pallidum:48

Q84U73              	100.00%		D3BMA3              	100.00%
Bootstrap support for Q84U73 as seed ortholog is 100%.
Bootstrap support for D3BMA3 as seed ortholog is 100%.

Group of orthologs #1753. Best score 48 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.pallidum:48

A8JH76              	100.00%		D3BU55              	100.00%
Bootstrap support for A8JH76 as seed ortholog is 100%.
Bootstrap support for D3BU55 as seed ortholog is 100%.

Group of orthologs #1754. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.pallidum:47

A8IU49              	100.00%		D3B2F4              	100.00%
A8JBZ2              	17.60%		
A8I5E5              	13.45%		
A8JH47              	12.96%		
A8HT63              	12.71%		
A8J1Z2              	10.76%		
A8INS3              	7.58%		
Bootstrap support for A8IU49 as seed ortholog is 100%.
Bootstrap support for D3B2F4 as seed ortholog is 100%.

Group of orthologs #1755. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.pallidum:47

A8ICU2              	100.00%		D3BVN5              	100.00%
                    	       		D3BC63              	8.45%
                    	       		D3BU86              	5.18%
Bootstrap support for A8ICU2 as seed ortholog is 100%.
Bootstrap support for D3BVN5 as seed ortholog is 100%.

Group of orthologs #1756. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.pallidum:47

A8IV50              	100.00%		D3BP96              	100.00%
A8IV49              	33.06%		
Bootstrap support for A8IV50 as seed ortholog is 100%.
Bootstrap support for D3BP96 as seed ortholog is 100%.

Group of orthologs #1757. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.pallidum:47

A8JIV5              	100.00%		D3B9D7              	100.00%
                    	       		D3B0A4              	6.10%
Bootstrap support for A8JIV5 as seed ortholog is 100%.
Bootstrap support for D3B9D7 as seed ortholog is 100%.

Group of orthologs #1758. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.pallidum:47

A8ICT4              	100.00%		D3AYF0              	100.00%
Bootstrap support for A8ICT4 as seed ortholog is 100%.
Bootstrap support for D3AYF0 as seed ortholog is 100%.

Group of orthologs #1759. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.pallidum:47

A8HQJ8              	100.00%		D3BHP4              	100.00%
Bootstrap support for A8HQJ8 as seed ortholog is 100%.
Bootstrap support for D3BHP4 as seed ortholog is 100%.

Group of orthologs #1760. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.pallidum:47

A8J7D2              	100.00%		D3BD68              	100.00%
Bootstrap support for A8J7D2 as seed ortholog is 100%.
Bootstrap support for D3BD68 as seed ortholog is 100%.

Group of orthologs #1761. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.pallidum:47

A8JI96              	100.00%		D3B6N2              	100.00%
Bootstrap support for A8JI96 as seed ortholog is 100%.
Bootstrap support for D3B6N2 as seed ortholog is 100%.

Group of orthologs #1762. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.pallidum:47

Q6UP32              	100.00%		D3BQ44              	100.00%
Bootstrap support for Q6UP32 as seed ortholog is 100%.
Bootstrap support for D3BQ44 as seed ortholog is 100%.

Group of orthologs #1763. Best score 46 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 P.pallidum:46

A8HPM7              	100.00%		D3B385              	100.00%
Bootstrap support for A8HPM7 as seed ortholog is 100%.
Bootstrap support for D3B385 as seed ortholog is 100%.

Group of orthologs #1764. Best score 46 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 P.pallidum:46

A8IYX9              	100.00%		D3B3Z9              	100.00%
Bootstrap support for A8IYX9 as seed ortholog is 100%.
Bootstrap support for D3B3Z9 as seed ortholog is 100%.

Group of orthologs #1765. Best score 46 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 P.pallidum:2

A8JHN4              	100.00%		D3BN44              	100.00%
Bootstrap support for A8JHN4 as seed ortholog is 100%.
Bootstrap support for D3BN44 as seed ortholog is 54%.
Alternative seed ortholog is D3B3T0 (2 bits away from this cluster)

Group of orthologs #1766. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.pallidum:45

A8J3Q2              	100.00%		D3AVS6              	100.00%
A8I9I7              	7.24%		D3AVS5              	57.54%
                    	       		D3AVS7              	28.97%
Bootstrap support for A8J3Q2 as seed ortholog is 100%.
Bootstrap support for D3AVS6 as seed ortholog is 100%.

Group of orthologs #1767. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.pallidum:45

A8HX63              	100.00%		D3B265              	100.00%
Bootstrap support for A8HX63 as seed ortholog is 100%.
Bootstrap support for D3B265 as seed ortholog is 100%.

Group of orthologs #1768. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.pallidum:45

A8I316              	100.00%		D3BET0              	100.00%
Bootstrap support for A8I316 as seed ortholog is 100%.
Bootstrap support for D3BET0 as seed ortholog is 100%.

Group of orthologs #1769. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.pallidum:44

A8IYK4              	100.00%		D3AZ91              	100.00%
A8IRA1              	42.06%		
Bootstrap support for A8IYK4 as seed ortholog is 100%.
Bootstrap support for D3AZ91 as seed ortholog is 100%.

Group of orthologs #1770. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.pallidum:44

A8IHY1              	100.00%		D3BDT9              	100.00%
                    	       		D3BB99              	21.65%
Bootstrap support for A8IHY1 as seed ortholog is 100%.
Bootstrap support for D3BDT9 as seed ortholog is 100%.

Group of orthologs #1771. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.pallidum:44

A8HNJ6              	100.00%		D3BTI0              	100.00%
Bootstrap support for A8HNJ6 as seed ortholog is 100%.
Bootstrap support for D3BTI0 as seed ortholog is 100%.

Group of orthologs #1772. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.pallidum:44

A8J8N9              	100.00%		D3BHN1              	100.00%
Bootstrap support for A8J8N9 as seed ortholog is 100%.
Bootstrap support for D3BHN1 as seed ortholog is 100%.

Group of orthologs #1773. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.pallidum:44

Q6UKY8              	100.00%		D3BR66              	100.00%
Bootstrap support for Q6UKY8 as seed ortholog is 100%.
Bootstrap support for D3BR66 as seed ortholog is 100%.

Group of orthologs #1774. Best score 43 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 P.pallidum:43

A8IYZ6              	100.00%		D3BCP0              	100.00%
A8JKA5              	17.27%		
A8ICZ0              	15.26%		
A8JEH7              	13.65%		
A8HSZ9              	12.85%		
A8IYK0              	11.65%		
A8IVN3              	11.24%		
A8IZ83              	10.44%		
A8IMB1              	9.64%		
A8JEW6              	9.24%		
A8IV10              	8.43%		
A8J8U8              	8.43%		
A8J7I4              	8.43%		
A8JE99              	8.03%		
A8JGU1              	7.23%		
A8JAA4              	6.43%		
A8J0P4              	5.62%		
A8JI57              	5.22%		
Bootstrap support for A8IYZ6 as seed ortholog is 100%.
Bootstrap support for D3BCP0 as seed ortholog is 100%.

Group of orthologs #1775. Best score 42 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 P.pallidum:42

A8HTX4              	100.00%		D3BJL0              	100.00%
Bootstrap support for A8HTX4 as seed ortholog is 100%.
Bootstrap support for D3BJL0 as seed ortholog is 100%.

Group of orthologs #1776. Best score 41 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 P.pallidum:41

A8J938              	100.00%		D3B4R6              	100.00%
                    	       		D3BFK0              	20.76%
Bootstrap support for A8J938 as seed ortholog is 100%.
Bootstrap support for D3B4R6 as seed ortholog is 100%.

Group of orthologs #1777. Best score 41 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 P.pallidum:41

A8JCY1              	100.00%		D3B678              	100.00%
A8JEG1              	25.48%		
Bootstrap support for A8JCY1 as seed ortholog is 100%.
Bootstrap support for D3B678 as seed ortholog is 100%.

Group of orthologs #1778. Best score 41 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 P.pallidum:41

A8HQR0              	100.00%		D3BEM9              	100.00%
Bootstrap support for A8HQR0 as seed ortholog is 100%.
Bootstrap support for D3BEM9 as seed ortholog is 100%.

Group of orthologs #1779. Best score 40 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 P.pallidum:40

A8J054              	100.00%		D3BNI4              	100.00%
                    	       		D3BNI3              	53.07%
                    	       		D3AXT4              	18.44%
                    	       		D3AZN9              	15.27%
                    	       		D3BJ43              	14.71%
Bootstrap support for A8J054 as seed ortholog is 100%.
Bootstrap support for D3BNI4 as seed ortholog is 100%.