###################################
3206 groups of orthologs
3351 in-paralogs from C.neoformans
3341 in-paralogs from T.rubrum
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 4729 bits
Score difference with first non-orthologous sequence - C.neoformans:4729 T.rubrum:4729

Q5KFR9              	100.00%		F2SV62              	100.00%
Bootstrap support for Q5KFR9 as seed ortholog is 100%.
Bootstrap support for F2SV62 as seed ortholog is 100%.

Group of orthologs #2. Best score 2812 bits
Score difference with first non-orthologous sequence - C.neoformans:2812 T.rubrum:2812

Q5KNM2              	100.00%		F2SCD7              	100.00%
Bootstrap support for Q5KNM2 as seed ortholog is 100%.
Bootstrap support for F2SCD7 as seed ortholog is 100%.

Group of orthologs #3. Best score 2720 bits
Score difference with first non-orthologous sequence - C.neoformans:2720 T.rubrum:2720

Q5KA63              	100.00%		F2SVD7              	100.00%
Bootstrap support for Q5KA63 as seed ortholog is 100%.
Bootstrap support for F2SVD7 as seed ortholog is 100%.

Group of orthologs #4. Best score 2408 bits
Score difference with first non-orthologous sequence - C.neoformans:2408 T.rubrum:2408

Q5KPW2              	100.00%		F2SUS1              	100.00%
Bootstrap support for Q5KPW2 as seed ortholog is 100%.
Bootstrap support for F2SUS1 as seed ortholog is 100%.

Group of orthologs #5. Best score 2335 bits
Score difference with first non-orthologous sequence - C.neoformans:2335 T.rubrum:2335

Q5KFC9              	100.00%		F2SK61              	100.00%
Bootstrap support for Q5KFC9 as seed ortholog is 100%.
Bootstrap support for F2SK61 as seed ortholog is 100%.

Group of orthologs #6. Best score 2268 bits
Score difference with first non-orthologous sequence - C.neoformans:1483 T.rubrum:1051

Q5KET5              	100.00%		F2SJ18              	100.00%
Bootstrap support for Q5KET5 as seed ortholog is 100%.
Bootstrap support for F2SJ18 as seed ortholog is 100%.

Group of orthologs #7. Best score 2186 bits
Score difference with first non-orthologous sequence - C.neoformans:2186 T.rubrum:2186

Q5K6T7              	100.00%		F2SF87              	100.00%
Bootstrap support for Q5K6T7 as seed ortholog is 100%.
Bootstrap support for F2SF87 as seed ortholog is 100%.

Group of orthologs #8. Best score 2158 bits
Score difference with first non-orthologous sequence - C.neoformans:2158 T.rubrum:2158

Q5KAK5              	100.00%		F2SLG3              	100.00%
Bootstrap support for Q5KAK5 as seed ortholog is 100%.
Bootstrap support for F2SLG3 as seed ortholog is 100%.

Group of orthologs #9. Best score 2090 bits
Score difference with first non-orthologous sequence - C.neoformans:2090 T.rubrum:2090

Q5KKP9              	100.00%		F2SXI1              	100.00%
Bootstrap support for Q5KKP9 as seed ortholog is 100%.
Bootstrap support for F2SXI1 as seed ortholog is 100%.

Group of orthologs #10. Best score 2071 bits
Score difference with first non-orthologous sequence - C.neoformans:2071 T.rubrum:2071

Q5KNL1              	100.00%		F2SMU8              	100.00%
Bootstrap support for Q5KNL1 as seed ortholog is 100%.
Bootstrap support for F2SMU8 as seed ortholog is 100%.

Group of orthologs #11. Best score 2041 bits
Score difference with first non-orthologous sequence - C.neoformans:2041 T.rubrum:2041

Q5KA29              	100.00%		F2SGS9              	100.00%
Bootstrap support for Q5KA29 as seed ortholog is 100%.
Bootstrap support for F2SGS9 as seed ortholog is 100%.

Group of orthologs #12. Best score 2009 bits
Score difference with first non-orthologous sequence - C.neoformans:2009 T.rubrum:2009

P0CN26              	100.00%		F2SE63              	100.00%
Bootstrap support for P0CN26 as seed ortholog is 100%.
Bootstrap support for F2SE63 as seed ortholog is 100%.

Group of orthologs #13. Best score 2008 bits
Score difference with first non-orthologous sequence - C.neoformans:2008 T.rubrum:2008

Q5KEY7              	100.00%		F2SCJ9              	100.00%
Bootstrap support for Q5KEY7 as seed ortholog is 100%.
Bootstrap support for F2SCJ9 as seed ortholog is 100%.

Group of orthologs #14. Best score 1887 bits
Score difference with first non-orthologous sequence - C.neoformans:1887 T.rubrum:565

Q5KG98              	100.00%		F2T141              	100.00%
Bootstrap support for Q5KG98 as seed ortholog is 100%.
Bootstrap support for F2T141 as seed ortholog is 100%.

Group of orthologs #15. Best score 1795 bits
Score difference with first non-orthologous sequence - C.neoformans:1795 T.rubrum:1795

Q5KGG3              	100.00%		F2SXT8              	100.00%
Bootstrap support for Q5KGG3 as seed ortholog is 100%.
Bootstrap support for F2SXT8 as seed ortholog is 100%.

Group of orthologs #16. Best score 1687 bits
Score difference with first non-orthologous sequence - C.neoformans:812 T.rubrum:370

Q5KJA1              	100.00%		F2SG60              	100.00%
Q5KLC4              	58.32%		
Bootstrap support for Q5KJA1 as seed ortholog is 100%.
Bootstrap support for F2SG60 as seed ortholog is 100%.

Group of orthologs #17. Best score 1448 bits
Score difference with first non-orthologous sequence - C.neoformans:1448 T.rubrum:1448

Q5KFT2              	100.00%		F2SGS7              	100.00%
Bootstrap support for Q5KFT2 as seed ortholog is 100%.
Bootstrap support for F2SGS7 as seed ortholog is 100%.

Group of orthologs #18. Best score 1424 bits
Score difference with first non-orthologous sequence - C.neoformans:1424 T.rubrum:1424

Q5K7V3              	100.00%		F2SIW5              	100.00%
Bootstrap support for Q5K7V3 as seed ortholog is 100%.
Bootstrap support for F2SIW5 as seed ortholog is 100%.

Group of orthologs #19. Best score 1422 bits
Score difference with first non-orthologous sequence - C.neoformans:1422 T.rubrum:1422

Q5KG99              	100.00%		F2T140              	100.00%
Bootstrap support for Q5KG99 as seed ortholog is 100%.
Bootstrap support for F2T140 as seed ortholog is 100%.

Group of orthologs #20. Best score 1412 bits
Score difference with first non-orthologous sequence - C.neoformans:1412 T.rubrum:1412

P0CM22              	100.00%		F2SMH3              	100.00%
Bootstrap support for P0CM22 as seed ortholog is 100%.
Bootstrap support for F2SMH3 as seed ortholog is 100%.

Group of orthologs #21. Best score 1406 bits
Score difference with first non-orthologous sequence - C.neoformans:1406 T.rubrum:1406

Q5KM99              	100.00%		F2SD19              	100.00%
Bootstrap support for Q5KM99 as seed ortholog is 100%.
Bootstrap support for F2SD19 as seed ortholog is 100%.

Group of orthologs #22. Best score 1401 bits
Score difference with first non-orthologous sequence - C.neoformans:466 T.rubrum:485

Q5KNB3              	100.00%		F2SMR8              	100.00%
Bootstrap support for Q5KNB3 as seed ortholog is 100%.
Bootstrap support for F2SMR8 as seed ortholog is 100%.

Group of orthologs #23. Best score 1376 bits
Score difference with first non-orthologous sequence - C.neoformans:1376 T.rubrum:1376

Q5KC33              	100.00%		F2SPY7              	100.00%
Bootstrap support for Q5KC33 as seed ortholog is 100%.
Bootstrap support for F2SPY7 as seed ortholog is 100%.

Group of orthologs #24. Best score 1373 bits
Score difference with first non-orthologous sequence - C.neoformans:960 T.rubrum:940

Q5KJ25              	100.00%		F2SQY2              	100.00%
Bootstrap support for Q5KJ25 as seed ortholog is 100%.
Bootstrap support for F2SQY2 as seed ortholog is 100%.

Group of orthologs #25. Best score 1373 bits
Score difference with first non-orthologous sequence - C.neoformans:1373 T.rubrum:1373

Q5KIB7              	100.00%		F2STE4              	100.00%
Bootstrap support for Q5KIB7 as seed ortholog is 100%.
Bootstrap support for F2STE4 as seed ortholog is 100%.

Group of orthologs #26. Best score 1365 bits
Score difference with first non-orthologous sequence - C.neoformans:1365 T.rubrum:1365

Q5KB97              	100.00%		F2SZB4              	100.00%
Bootstrap support for Q5KB97 as seed ortholog is 100%.
Bootstrap support for F2SZB4 as seed ortholog is 100%.

Group of orthologs #27. Best score 1362 bits
Score difference with first non-orthologous sequence - C.neoformans:1362 T.rubrum:1362

Q5KIL9              	100.00%		F2SM08              	100.00%
Bootstrap support for Q5KIL9 as seed ortholog is 100%.
Bootstrap support for F2SM08 as seed ortholog is 100%.

Group of orthologs #28. Best score 1349 bits
Score difference with first non-orthologous sequence - C.neoformans:1349 T.rubrum:1349

Q5KFV9              	100.00%		F2SYH8              	100.00%
Bootstrap support for Q5KFV9 as seed ortholog is 100%.
Bootstrap support for F2SYH8 as seed ortholog is 100%.

Group of orthologs #29. Best score 1348 bits
Score difference with first non-orthologous sequence - C.neoformans:1348 T.rubrum:1348

Q5KP97              	100.00%		F2SCP4              	100.00%
Bootstrap support for Q5KP97 as seed ortholog is 100%.
Bootstrap support for F2SCP4 as seed ortholog is 100%.

Group of orthologs #30. Best score 1347 bits
Score difference with first non-orthologous sequence - C.neoformans:1347 T.rubrum:1347

Q5KIF6              	100.00%		F2SY14              	100.00%
Bootstrap support for Q5KIF6 as seed ortholog is 100%.
Bootstrap support for F2SY14 as seed ortholog is 100%.

Group of orthologs #31. Best score 1346 bits
Score difference with first non-orthologous sequence - C.neoformans:1346 T.rubrum:1346

Q5KEH7              	100.00%		F2SU57              	100.00%
Bootstrap support for Q5KEH7 as seed ortholog is 100%.
Bootstrap support for F2SU57 as seed ortholog is 100%.

Group of orthologs #32. Best score 1336 bits
Score difference with first non-orthologous sequence - C.neoformans:1336 T.rubrum:1336

Q5K9W1              	100.00%		F2SRU9              	100.00%
Bootstrap support for Q5K9W1 as seed ortholog is 100%.
Bootstrap support for F2SRU9 as seed ortholog is 100%.

Group of orthologs #33. Best score 1322 bits
Score difference with first non-orthologous sequence - C.neoformans:1322 T.rubrum:1322

P0CP00              	100.00%		F2SSU0              	100.00%
Bootstrap support for P0CP00 as seed ortholog is 100%.
Bootstrap support for F2SSU0 as seed ortholog is 100%.

Group of orthologs #34. Best score 1314 bits
Score difference with first non-orthologous sequence - C.neoformans:633 T.rubrum:747

Q5KP96              	100.00%		F2SK43              	100.00%
Bootstrap support for Q5KP96 as seed ortholog is 100%.
Bootstrap support for F2SK43 as seed ortholog is 100%.

Group of orthologs #35. Best score 1307 bits
Score difference with first non-orthologous sequence - C.neoformans:1307 T.rubrum:1307

Q5KMH0              	100.00%		F2SXI3              	100.00%
Bootstrap support for Q5KMH0 as seed ortholog is 100%.
Bootstrap support for F2SXI3 as seed ortholog is 100%.

Group of orthologs #36. Best score 1306 bits
Score difference with first non-orthologous sequence - C.neoformans:1306 T.rubrum:1306

Q5KBW5              	100.00%		F2SUZ6              	100.00%
Bootstrap support for Q5KBW5 as seed ortholog is 100%.
Bootstrap support for F2SUZ6 as seed ortholog is 100%.

Group of orthologs #37. Best score 1302 bits
Score difference with first non-orthologous sequence - C.neoformans:1302 T.rubrum:473

Q5KFI7              	100.00%		F2SQQ5              	100.00%
Bootstrap support for Q5KFI7 as seed ortholog is 100%.
Bootstrap support for F2SQQ5 as seed ortholog is 100%.

Group of orthologs #38. Best score 1279 bits
Score difference with first non-orthologous sequence - C.neoformans:1279 T.rubrum:1279

Q5KEV8              	100.00%		F2SKX1              	100.00%
Bootstrap support for Q5KEV8 as seed ortholog is 100%.
Bootstrap support for F2SKX1 as seed ortholog is 100%.

Group of orthologs #39. Best score 1271 bits
Score difference with first non-orthologous sequence - C.neoformans:1271 T.rubrum:1271

Q5KHP4              	100.00%		F2SNE8              	100.00%
Bootstrap support for Q5KHP4 as seed ortholog is 100%.
Bootstrap support for F2SNE8 as seed ortholog is 100%.

Group of orthologs #40. Best score 1266 bits
Score difference with first non-orthologous sequence - C.neoformans:1266 T.rubrum:1144

Q5KHJ9              	100.00%		F2SQR4              	100.00%
Bootstrap support for Q5KHJ9 as seed ortholog is 100%.
Bootstrap support for F2SQR4 as seed ortholog is 100%.

Group of orthologs #41. Best score 1265 bits
Score difference with first non-orthologous sequence - C.neoformans:1265 T.rubrum:1265

Q5KE57              	100.00%		F2SP26              	100.00%
Bootstrap support for Q5KE57 as seed ortholog is 100%.
Bootstrap support for F2SP26 as seed ortholog is 100%.

Group of orthologs #42. Best score 1238 bits
Score difference with first non-orthologous sequence - C.neoformans:1238 T.rubrum:1238

P0CR22              	100.00%		F2SFL0              	100.00%
Bootstrap support for P0CR22 as seed ortholog is 100%.
Bootstrap support for F2SFL0 as seed ortholog is 100%.

Group of orthologs #43. Best score 1220 bits
Score difference with first non-orthologous sequence - C.neoformans:1220 T.rubrum:1220

Q5KPM2              	100.00%		F2SMH0              	100.00%
Bootstrap support for Q5KPM2 as seed ortholog is 100%.
Bootstrap support for F2SMH0 as seed ortholog is 100%.

Group of orthologs #44. Best score 1211 bits
Score difference with first non-orthologous sequence - C.neoformans:827 T.rubrum:801

Q5KGT3              	100.00%		F2SUV8              	100.00%
Bootstrap support for Q5KGT3 as seed ortholog is 100%.
Bootstrap support for F2SUV8 as seed ortholog is 100%.

Group of orthologs #45. Best score 1207 bits
Score difference with first non-orthologous sequence - C.neoformans:1207 T.rubrum:1207

Q5KA48              	100.00%		F2SVW0              	100.00%
Bootstrap support for Q5KA48 as seed ortholog is 100%.
Bootstrap support for F2SVW0 as seed ortholog is 100%.

Group of orthologs #46. Best score 1206 bits
Score difference with first non-orthologous sequence - C.neoformans:1206 T.rubrum:1206

Q5KGK1              	100.00%		F2SNS6              	100.00%
Bootstrap support for Q5KGK1 as seed ortholog is 100%.
Bootstrap support for F2SNS6 as seed ortholog is 100%.

Group of orthologs #47. Best score 1206 bits
Score difference with first non-orthologous sequence - C.neoformans:1206 T.rubrum:1206

Q5KPX3              	100.00%		F2SGG2              	100.00%
Bootstrap support for Q5KPX3 as seed ortholog is 100%.
Bootstrap support for F2SGG2 as seed ortholog is 100%.

Group of orthologs #48. Best score 1204 bits
Score difference with first non-orthologous sequence - C.neoformans:1204 T.rubrum:1204

Q5KDF5              	100.00%		F2SQG9              	100.00%
Bootstrap support for Q5KDF5 as seed ortholog is 100%.
Bootstrap support for F2SQG9 as seed ortholog is 100%.

Group of orthologs #49. Best score 1200 bits
Score difference with first non-orthologous sequence - C.neoformans:1200 T.rubrum:1200

Q5KG64              	100.00%		F2SBN2              	100.00%
Bootstrap support for Q5KG64 as seed ortholog is 100%.
Bootstrap support for F2SBN2 as seed ortholog is 100%.

Group of orthologs #50. Best score 1194 bits
Score difference with first non-orthologous sequence - C.neoformans:555 T.rubrum:651

Q5KJN9              	100.00%		F2SPD6              	100.00%
Bootstrap support for Q5KJN9 as seed ortholog is 100%.
Bootstrap support for F2SPD6 as seed ortholog is 100%.

Group of orthologs #51. Best score 1191 bits
Score difference with first non-orthologous sequence - C.neoformans:1191 T.rubrum:887

Q5KEK6              	100.00%		F2SX92              	100.00%
Bootstrap support for Q5KEK6 as seed ortholog is 100%.
Bootstrap support for F2SX92 as seed ortholog is 100%.

Group of orthologs #52. Best score 1189 bits
Score difference with first non-orthologous sequence - C.neoformans:929 T.rubrum:838

Q5KCV6              	100.00%		F2SH32              	100.00%
Bootstrap support for Q5KCV6 as seed ortholog is 100%.
Bootstrap support for F2SH32 as seed ortholog is 100%.

Group of orthologs #53. Best score 1183 bits
Score difference with first non-orthologous sequence - C.neoformans:1183 T.rubrum:1183

Q5KKH8              	100.00%		F2SZ53              	100.00%
Bootstrap support for Q5KKH8 as seed ortholog is 100%.
Bootstrap support for F2SZ53 as seed ortholog is 100%.

Group of orthologs #54. Best score 1174 bits
Score difference with first non-orthologous sequence - C.neoformans:745 T.rubrum:845

Q5KA71              	100.00%		F2SS16              	100.00%
Bootstrap support for Q5KA71 as seed ortholog is 100%.
Bootstrap support for F2SS16 as seed ortholog is 100%.

Group of orthologs #55. Best score 1164 bits
Score difference with first non-orthologous sequence - C.neoformans:1164 T.rubrum:1039

Q5K8Q4              	100.00%		F2SBZ7              	100.00%
Bootstrap support for Q5K8Q4 as seed ortholog is 100%.
Bootstrap support for F2SBZ7 as seed ortholog is 100%.

Group of orthologs #56. Best score 1159 bits
Score difference with first non-orthologous sequence - C.neoformans:412 T.rubrum:1159

Q5KH79              	100.00%		F2SCT1              	100.00%
Bootstrap support for Q5KH79 as seed ortholog is 100%.
Bootstrap support for F2SCT1 as seed ortholog is 100%.

Group of orthologs #57. Best score 1151 bits
Score difference with first non-orthologous sequence - C.neoformans:1151 T.rubrum:872

Q5KCR8              	100.00%		F2SDB4              	100.00%
Bootstrap support for Q5KCR8 as seed ortholog is 100%.
Bootstrap support for F2SDB4 as seed ortholog is 100%.

Group of orthologs #58. Best score 1145 bits
Score difference with first non-orthologous sequence - C.neoformans:1145 T.rubrum:1145

Q5KH77              	100.00%		F2SI67              	100.00%
Bootstrap support for Q5KH77 as seed ortholog is 100%.
Bootstrap support for F2SI67 as seed ortholog is 100%.

Group of orthologs #59. Best score 1144 bits
Score difference with first non-orthologous sequence - C.neoformans:1144 T.rubrum:1144

Q5KIQ1              	100.00%		F2SIK5              	100.00%
Bootstrap support for Q5KIQ1 as seed ortholog is 100%.
Bootstrap support for F2SIK5 as seed ortholog is 100%.

Group of orthologs #60. Best score 1136 bits
Score difference with first non-orthologous sequence - C.neoformans:1136 T.rubrum:1136

Q5KHW3              	100.00%		F2SYG4              	100.00%
Bootstrap support for Q5KHW3 as seed ortholog is 100%.
Bootstrap support for F2SYG4 as seed ortholog is 100%.

Group of orthologs #61. Best score 1134 bits
Score difference with first non-orthologous sequence - C.neoformans:1134 T.rubrum:1134

Q5KEG6              	100.00%		F2SUC9              	100.00%
Bootstrap support for Q5KEG6 as seed ortholog is 100%.
Bootstrap support for F2SUC9 as seed ortholog is 100%.

Group of orthologs #62. Best score 1129 bits
Score difference with first non-orthologous sequence - C.neoformans:1129 T.rubrum:1129

Q5K754              	100.00%		F2SUN9              	100.00%
Bootstrap support for Q5K754 as seed ortholog is 100%.
Bootstrap support for F2SUN9 as seed ortholog is 100%.

Group of orthologs #63. Best score 1111 bits
Score difference with first non-orthologous sequence - C.neoformans:707 T.rubrum:700

Q5KKN7              	100.00%		F2SCV1              	100.00%
Bootstrap support for Q5KKN7 as seed ortholog is 100%.
Bootstrap support for F2SCV1 as seed ortholog is 100%.

Group of orthologs #64. Best score 1108 bits
Score difference with first non-orthologous sequence - C.neoformans:1108 T.rubrum:1108

Q5KGN0              	100.00%		F2SH03              	100.00%
Bootstrap support for Q5KGN0 as seed ortholog is 100%.
Bootstrap support for F2SH03 as seed ortholog is 100%.

Group of orthologs #65. Best score 1103 bits
Score difference with first non-orthologous sequence - C.neoformans:302 T.rubrum:754

Q5KI71              	100.00%		F2SE16              	100.00%
Bootstrap support for Q5KI71 as seed ortholog is 99%.
Bootstrap support for F2SE16 as seed ortholog is 100%.

Group of orthologs #66. Best score 1101 bits
Score difference with first non-orthologous sequence - C.neoformans:210 T.rubrum:1101

Q5KIK6              	100.00%		F2SEY0              	100.00%
Bootstrap support for Q5KIK6 as seed ortholog is 100%.
Bootstrap support for F2SEY0 as seed ortholog is 100%.

Group of orthologs #67. Best score 1099 bits
Score difference with first non-orthologous sequence - C.neoformans:1099 T.rubrum:1099

Q5KGH2              	100.00%		F2SNK9              	100.00%
Bootstrap support for Q5KGH2 as seed ortholog is 100%.
Bootstrap support for F2SNK9 as seed ortholog is 100%.

Group of orthologs #68. Best score 1075 bits
Score difference with first non-orthologous sequence - C.neoformans:1075 T.rubrum:1075

Q5KKD9              	100.00%		F2SWC1              	100.00%
Bootstrap support for Q5KKD9 as seed ortholog is 100%.
Bootstrap support for F2SWC1 as seed ortholog is 100%.

Group of orthologs #69. Best score 1069 bits
Score difference with first non-orthologous sequence - C.neoformans:1069 T.rubrum:1018

Q5KKM4              	100.00%		F2SU38              	100.00%
Q5KKP4              	68.62%		
Bootstrap support for Q5KKM4 as seed ortholog is 100%.
Bootstrap support for F2SU38 as seed ortholog is 100%.

Group of orthologs #70. Best score 1066 bits
Score difference with first non-orthologous sequence - C.neoformans:1066 T.rubrum:1066

Q5KF97              	100.00%		F2SIM2              	100.00%
Bootstrap support for Q5KF97 as seed ortholog is 100%.
Bootstrap support for F2SIM2 as seed ortholog is 100%.

Group of orthologs #71. Best score 1059 bits
Score difference with first non-orthologous sequence - C.neoformans:1059 T.rubrum:1059

Q5K8J1              	100.00%		F2SHY7              	100.00%
Bootstrap support for Q5K8J1 as seed ortholog is 100%.
Bootstrap support for F2SHY7 as seed ortholog is 100%.

Group of orthologs #72. Best score 1057 bits
Score difference with first non-orthologous sequence - C.neoformans:1057 T.rubrum:1057

Q5KIH7              	100.00%		F2SL70              	100.00%
Bootstrap support for Q5KIH7 as seed ortholog is 100%.
Bootstrap support for F2SL70 as seed ortholog is 100%.

Group of orthologs #73. Best score 1056 bits
Score difference with first non-orthologous sequence - C.neoformans:321 T.rubrum:1056

Q5KCU4              	100.00%		F2SSX0              	100.00%
Bootstrap support for Q5KCU4 as seed ortholog is 99%.
Bootstrap support for F2SSX0 as seed ortholog is 100%.

Group of orthologs #74. Best score 1049 bits
Score difference with first non-orthologous sequence - C.neoformans:1049 T.rubrum:1049

Q5KID8              	100.00%		F2SZH0              	100.00%
Bootstrap support for Q5KID8 as seed ortholog is 100%.
Bootstrap support for F2SZH0 as seed ortholog is 100%.

Group of orthologs #75. Best score 1048 bits
Score difference with first non-orthologous sequence - C.neoformans:1048 T.rubrum:1048

Q5KGS9              	100.00%		F2SLM3              	100.00%
Bootstrap support for Q5KGS9 as seed ortholog is 100%.
Bootstrap support for F2SLM3 as seed ortholog is 100%.

Group of orthologs #76. Best score 1047 bits
Score difference with first non-orthologous sequence - C.neoformans:1047 T.rubrum:958

Q5KMF6              	100.00%		F2SIT7              	100.00%
Bootstrap support for Q5KMF6 as seed ortholog is 100%.
Bootstrap support for F2SIT7 as seed ortholog is 100%.

Group of orthologs #77. Best score 1045 bits
Score difference with first non-orthologous sequence - C.neoformans:1045 T.rubrum:1045

Q5KC94              	100.00%		F2SLC2              	100.00%
Bootstrap support for Q5KC94 as seed ortholog is 100%.
Bootstrap support for F2SLC2 as seed ortholog is 100%.

Group of orthologs #78. Best score 1043 bits
Score difference with first non-orthologous sequence - C.neoformans:1043 T.rubrum:1043

Q5K7U0              	100.00%		F2SF18              	100.00%
Bootstrap support for Q5K7U0 as seed ortholog is 100%.
Bootstrap support for F2SF18 as seed ortholog is 100%.

Group of orthologs #79. Best score 1043 bits
Score difference with first non-orthologous sequence - C.neoformans:1043 T.rubrum:1043

Q5KDU2              	100.00%		F2SZG1              	100.00%
Bootstrap support for Q5KDU2 as seed ortholog is 100%.
Bootstrap support for F2SZG1 as seed ortholog is 100%.

Group of orthologs #80. Best score 1035 bits
Score difference with first non-orthologous sequence - C.neoformans:718 T.rubrum:615

Q5KD67              	100.00%		F2SFU2              	100.00%
Bootstrap support for Q5KD67 as seed ortholog is 100%.
Bootstrap support for F2SFU2 as seed ortholog is 100%.

Group of orthologs #81. Best score 1030 bits
Score difference with first non-orthologous sequence - C.neoformans:803 T.rubrum:127

Q5KN49              	100.00%		F2T1C4              	100.00%
                    	       		F2SFI7              	8.12%
Bootstrap support for Q5KN49 as seed ortholog is 100%.
Bootstrap support for F2T1C4 as seed ortholog is 97%.

Group of orthologs #82. Best score 1021 bits
Score difference with first non-orthologous sequence - C.neoformans:1021 T.rubrum:1021

Q5KKE3              	100.00%		F2SV44              	100.00%
Bootstrap support for Q5KKE3 as seed ortholog is 100%.
Bootstrap support for F2SV44 as seed ortholog is 100%.

Group of orthologs #83. Best score 1020 bits
Score difference with first non-orthologous sequence - C.neoformans:912 T.rubrum:1020

Q5KIF1              	100.00%		F2SNF0              	100.00%
Bootstrap support for Q5KIF1 as seed ortholog is 100%.
Bootstrap support for F2SNF0 as seed ortholog is 100%.

Group of orthologs #84. Best score 1020 bits
Score difference with first non-orthologous sequence - C.neoformans:832 T.rubrum:1020

Q5KNR6              	100.00%		F2SY13              	100.00%
Bootstrap support for Q5KNR6 as seed ortholog is 100%.
Bootstrap support for F2SY13 as seed ortholog is 100%.

Group of orthologs #85. Best score 1017 bits
Score difference with first non-orthologous sequence - C.neoformans:1017 T.rubrum:1017

Q5K9G4              	100.00%		F2SPN2              	100.00%
Bootstrap support for Q5K9G4 as seed ortholog is 100%.
Bootstrap support for F2SPN2 as seed ortholog is 100%.

Group of orthologs #86. Best score 1011 bits
Score difference with first non-orthologous sequence - C.neoformans:873 T.rubrum:1011

Q5KIS3              	100.00%		F2SEH3              	100.00%
Bootstrap support for Q5KIS3 as seed ortholog is 100%.
Bootstrap support for F2SEH3 as seed ortholog is 100%.

Group of orthologs #87. Best score 1002 bits
Score difference with first non-orthologous sequence - C.neoformans:1002 T.rubrum:1002

Q5KBA0              	100.00%		F2SJ90              	100.00%
Bootstrap support for Q5KBA0 as seed ortholog is 100%.
Bootstrap support for F2SJ90 as seed ortholog is 100%.

Group of orthologs #88. Best score 1000 bits
Score difference with first non-orthologous sequence - C.neoformans:1000 T.rubrum:1000

P0CS22              	100.00%		F2STJ3              	100.00%
Bootstrap support for P0CS22 as seed ortholog is 100%.
Bootstrap support for F2STJ3 as seed ortholog is 100%.

Group of orthologs #89. Best score 997 bits
Score difference with first non-orthologous sequence - C.neoformans:997 T.rubrum:997

Q5KIA2              	100.00%		F2SLL0              	100.00%
Bootstrap support for Q5KIA2 as seed ortholog is 100%.
Bootstrap support for F2SLL0 as seed ortholog is 100%.

Group of orthologs #90. Best score 996 bits
Score difference with first non-orthologous sequence - C.neoformans:834 T.rubrum:775

Q5KIC0              	100.00%		F2SZE5              	100.00%
                    	       		F2SBX6              	12.49%
Bootstrap support for Q5KIC0 as seed ortholog is 100%.
Bootstrap support for F2SZE5 as seed ortholog is 100%.

Group of orthologs #91. Best score 976 bits
Score difference with first non-orthologous sequence - C.neoformans:976 T.rubrum:976

Q5KBP7              	100.00%		F2SIZ8              	100.00%
Bootstrap support for Q5KBP7 as seed ortholog is 100%.
Bootstrap support for F2SIZ8 as seed ortholog is 100%.

Group of orthologs #92. Best score 976 bits
Score difference with first non-orthologous sequence - C.neoformans:976 T.rubrum:976

P0CR38              	100.00%		F2SUM5              	100.00%
Bootstrap support for P0CR38 as seed ortholog is 100%.
Bootstrap support for F2SUM5 as seed ortholog is 100%.

Group of orthologs #93. Best score 970 bits
Score difference with first non-orthologous sequence - C.neoformans:970 T.rubrum:970

P0CN82              	100.00%		F2SPZ6              	100.00%
Bootstrap support for P0CN82 as seed ortholog is 100%.
Bootstrap support for F2SPZ6 as seed ortholog is 100%.

Group of orthologs #94. Best score 970 bits
Score difference with first non-orthologous sequence - C.neoformans:970 T.rubrum:970

Q5KEV3              	100.00%		F2SJJ8              	100.00%
Bootstrap support for Q5KEV3 as seed ortholog is 100%.
Bootstrap support for F2SJJ8 as seed ortholog is 100%.

Group of orthologs #95. Best score 970 bits
Score difference with first non-orthologous sequence - C.neoformans:970 T.rubrum:970

Q5KNG1              	100.00%		F2SG20              	100.00%
Bootstrap support for Q5KNG1 as seed ortholog is 100%.
Bootstrap support for F2SG20 as seed ortholog is 100%.

Group of orthologs #96. Best score 969 bits
Score difference with first non-orthologous sequence - C.neoformans:969 T.rubrum:969

Q5KJI1              	100.00%		F2SZB1              	100.00%
Bootstrap support for Q5KJI1 as seed ortholog is 100%.
Bootstrap support for F2SZB1 as seed ortholog is 100%.

Group of orthologs #97. Best score 967 bits
Score difference with first non-orthologous sequence - C.neoformans:287 T.rubrum:371

Q5KED3              	100.00%		F2SQI4              	100.00%
Bootstrap support for Q5KED3 as seed ortholog is 99%.
Bootstrap support for F2SQI4 as seed ortholog is 100%.

Group of orthologs #98. Best score 963 bits
Score difference with first non-orthologous sequence - C.neoformans:963 T.rubrum:963

Q5KAT3              	100.00%		F2SYT3              	100.00%
Bootstrap support for Q5KAT3 as seed ortholog is 100%.
Bootstrap support for F2SYT3 as seed ortholog is 100%.

Group of orthologs #99. Best score 961 bits
Score difference with first non-orthologous sequence - C.neoformans:543 T.rubrum:961

Q5K7R6              	100.00%		F2SVB4              	100.00%
Bootstrap support for Q5K7R6 as seed ortholog is 100%.
Bootstrap support for F2SVB4 as seed ortholog is 100%.

Group of orthologs #100. Best score 951 bits
Score difference with first non-orthologous sequence - C.neoformans:951 T.rubrum:523

Q5KD08              	100.00%		F2SNM7              	100.00%
Bootstrap support for Q5KD08 as seed ortholog is 100%.
Bootstrap support for F2SNM7 as seed ortholog is 100%.

Group of orthologs #101. Best score 948 bits
Score difference with first non-orthologous sequence - C.neoformans:804 T.rubrum:948

Q5KPM3              	100.00%		F2SQ88              	100.00%
Bootstrap support for Q5KPM3 as seed ortholog is 100%.
Bootstrap support for F2SQ88 as seed ortholog is 100%.

Group of orthologs #102. Best score 946 bits
Score difference with first non-orthologous sequence - C.neoformans:946 T.rubrum:946

Q5KBL4              	100.00%		F2SHH5              	100.00%
Bootstrap support for Q5KBL4 as seed ortholog is 100%.
Bootstrap support for F2SHH5 as seed ortholog is 100%.

Group of orthologs #103. Best score 944 bits
Score difference with first non-orthologous sequence - C.neoformans:944 T.rubrum:828

Q5KQ62              	100.00%		F2T102              	100.00%
Bootstrap support for Q5KQ62 as seed ortholog is 100%.
Bootstrap support for F2T102 as seed ortholog is 100%.

Group of orthologs #104. Best score 939 bits
Score difference with first non-orthologous sequence - C.neoformans:939 T.rubrum:939

Q5KMN3              	100.00%		F2SQP2              	100.00%
Bootstrap support for Q5KMN3 as seed ortholog is 100%.
Bootstrap support for F2SQP2 as seed ortholog is 100%.

Group of orthologs #105. Best score 934 bits
Score difference with first non-orthologous sequence - C.neoformans:934 T.rubrum:647

P0CO16              	100.00%		F2SPP7              	100.00%
Bootstrap support for P0CO16 as seed ortholog is 100%.
Bootstrap support for F2SPP7 as seed ortholog is 100%.

Group of orthologs #106. Best score 933 bits
Score difference with first non-orthologous sequence - C.neoformans:933 T.rubrum:933

Q5KDY4              	100.00%		F2SYV1              	100.00%
Bootstrap support for Q5KDY4 as seed ortholog is 100%.
Bootstrap support for F2SYV1 as seed ortholog is 100%.

Group of orthologs #107. Best score 932 bits
Score difference with first non-orthologous sequence - C.neoformans:110 T.rubrum:320

Q5KE86              	100.00%		F2SN11              	100.00%
Bootstrap support for Q5KE86 as seed ortholog is 90%.
Bootstrap support for F2SN11 as seed ortholog is 99%.

Group of orthologs #108. Best score 926 bits
Score difference with first non-orthologous sequence - C.neoformans:926 T.rubrum:926

Q5KDD4              	100.00%		F2SNK5              	100.00%
Bootstrap support for Q5KDD4 as seed ortholog is 100%.
Bootstrap support for F2SNK5 as seed ortholog is 100%.

Group of orthologs #109. Best score 921 bits
Score difference with first non-orthologous sequence - C.neoformans:921 T.rubrum:921

Q5KLX6              	100.00%		F2SGY7              	100.00%
Bootstrap support for Q5KLX6 as seed ortholog is 100%.
Bootstrap support for F2SGY7 as seed ortholog is 100%.

Group of orthologs #110. Best score 921 bits
Score difference with first non-orthologous sequence - C.neoformans:179 T.rubrum:921

Q5K7P0              	100.00%		F2SXS5              	100.00%
Bootstrap support for Q5K7P0 as seed ortholog is 99%.
Bootstrap support for F2SXS5 as seed ortholog is 100%.

Group of orthologs #111. Best score 921 bits
Score difference with first non-orthologous sequence - C.neoformans:921 T.rubrum:921

Q5KKG1              	100.00%		F2SWF1              	100.00%
Bootstrap support for Q5KKG1 as seed ortholog is 100%.
Bootstrap support for F2SWF1 as seed ortholog is 100%.

Group of orthologs #112. Best score 916 bits
Score difference with first non-orthologous sequence - C.neoformans:916 T.rubrum:916

Q5KMJ4              	100.00%		F2SEE3              	100.00%
Bootstrap support for Q5KMJ4 as seed ortholog is 100%.
Bootstrap support for F2SEE3 as seed ortholog is 100%.

Group of orthologs #113. Best score 915 bits
Score difference with first non-orthologous sequence - C.neoformans:915 T.rubrum:915

Q5KID7              	100.00%		F2STL5              	100.00%
Bootstrap support for Q5KID7 as seed ortholog is 100%.
Bootstrap support for F2STL5 as seed ortholog is 100%.

Group of orthologs #114. Best score 913 bits
Score difference with first non-orthologous sequence - C.neoformans:913 T.rubrum:913

Q5KML2              	100.00%		F2SNI1              	100.00%
Bootstrap support for Q5KML2 as seed ortholog is 100%.
Bootstrap support for F2SNI1 as seed ortholog is 100%.

Group of orthologs #115. Best score 912 bits
Score difference with first non-orthologous sequence - C.neoformans:912 T.rubrum:912

Q5K7N5              	100.00%		F2SJT0              	100.00%
Bootstrap support for Q5K7N5 as seed ortholog is 100%.
Bootstrap support for F2SJT0 as seed ortholog is 100%.

Group of orthologs #116. Best score 910 bits
Score difference with first non-orthologous sequence - C.neoformans:910 T.rubrum:910

Q5KF96              	100.00%		F2ST18              	100.00%
Bootstrap support for Q5KF96 as seed ortholog is 100%.
Bootstrap support for F2ST18 as seed ortholog is 100%.

Group of orthologs #117. Best score 909 bits
Score difference with first non-orthologous sequence - C.neoformans:909 T.rubrum:909

Q5KDK1              	100.00%		F2SMD9              	100.00%
Bootstrap support for Q5KDK1 as seed ortholog is 100%.
Bootstrap support for F2SMD9 as seed ortholog is 100%.

Group of orthologs #118. Best score 909 bits
Score difference with first non-orthologous sequence - C.neoformans:909 T.rubrum:758

Q5KIM6              	100.00%		F2SM19              	100.00%
Bootstrap support for Q5KIM6 as seed ortholog is 100%.
Bootstrap support for F2SM19 as seed ortholog is 100%.

Group of orthologs #119. Best score 908 bits
Score difference with first non-orthologous sequence - C.neoformans:908 T.rubrum:908

Q5KJ33              	100.00%		F2SLJ8              	100.00%
Bootstrap support for Q5KJ33 as seed ortholog is 100%.
Bootstrap support for F2SLJ8 as seed ortholog is 100%.

Group of orthologs #120. Best score 908 bits
Score difference with first non-orthologous sequence - C.neoformans:908 T.rubrum:908

Q5KM80              	100.00%		F2T0P9              	100.00%
Bootstrap support for Q5KM80 as seed ortholog is 100%.
Bootstrap support for F2T0P9 as seed ortholog is 100%.

Group of orthologs #121. Best score 904 bits
Score difference with first non-orthologous sequence - C.neoformans:904 T.rubrum:904

Q5KI75              	100.00%		F2SEN3              	100.00%
Bootstrap support for Q5KI75 as seed ortholog is 100%.
Bootstrap support for F2SEN3 as seed ortholog is 100%.

Group of orthologs #122. Best score 901 bits
Score difference with first non-orthologous sequence - C.neoformans:535 T.rubrum:507

Q5KEX1              	100.00%		F2SRC8              	100.00%
Bootstrap support for Q5KEX1 as seed ortholog is 100%.
Bootstrap support for F2SRC8 as seed ortholog is 100%.

Group of orthologs #123. Best score 900 bits
Score difference with first non-orthologous sequence - C.neoformans:338 T.rubrum:900

Q5KJ21              	100.00%		F2SC28              	100.00%
Bootstrap support for Q5KJ21 as seed ortholog is 100%.
Bootstrap support for F2SC28 as seed ortholog is 100%.

Group of orthologs #124. Best score 898 bits
Score difference with first non-orthologous sequence - C.neoformans:898 T.rubrum:898

Q5KBF6              	100.00%		F2SJK2              	100.00%
Bootstrap support for Q5KBF6 as seed ortholog is 100%.
Bootstrap support for F2SJK2 as seed ortholog is 100%.

Group of orthologs #125. Best score 896 bits
Score difference with first non-orthologous sequence - C.neoformans:896 T.rubrum:896

Q5KAR2              	100.00%		F2T0F1              	100.00%
Bootstrap support for Q5KAR2 as seed ortholog is 100%.
Bootstrap support for F2T0F1 as seed ortholog is 100%.

Group of orthologs #126. Best score 894 bits
Score difference with first non-orthologous sequence - C.neoformans:894 T.rubrum:894

Q5KF07              	100.00%		F2SP76              	100.00%
Bootstrap support for Q5KF07 as seed ortholog is 100%.
Bootstrap support for F2SP76 as seed ortholog is 100%.

Group of orthologs #127. Best score 893 bits
Score difference with first non-orthologous sequence - C.neoformans:752 T.rubrum:662

Q5KB00              	100.00%		F2SZ96              	100.00%
Bootstrap support for Q5KB00 as seed ortholog is 100%.
Bootstrap support for F2SZ96 as seed ortholog is 100%.

Group of orthologs #128. Best score 893 bits
Score difference with first non-orthologous sequence - C.neoformans:893 T.rubrum:893

Q5KNS5              	100.00%		F2SYU2              	100.00%
Bootstrap support for Q5KNS5 as seed ortholog is 100%.
Bootstrap support for F2SYU2 as seed ortholog is 100%.

Group of orthologs #129. Best score 890 bits
Score difference with first non-orthologous sequence - C.neoformans:890 T.rubrum:450

Q5KII1              	100.00%		F2SES6              	100.00%
Bootstrap support for Q5KII1 as seed ortholog is 100%.
Bootstrap support for F2SES6 as seed ortholog is 100%.

Group of orthologs #130. Best score 884 bits
Score difference with first non-orthologous sequence - C.neoformans:884 T.rubrum:884

Q5K6Z6              	100.00%		F2SM79              	100.00%
Bootstrap support for Q5K6Z6 as seed ortholog is 100%.
Bootstrap support for F2SM79 as seed ortholog is 100%.

Group of orthologs #131. Best score 884 bits
Score difference with first non-orthologous sequence - C.neoformans:884 T.rubrum:884

Q5KBV2              	100.00%		F2SX85              	100.00%
Bootstrap support for Q5KBV2 as seed ortholog is 100%.
Bootstrap support for F2SX85 as seed ortholog is 100%.

Group of orthologs #132. Best score 875 bits
Score difference with first non-orthologous sequence - C.neoformans:351 T.rubrum:309

Q5KGL0              	100.00%		F2SMC2              	100.00%
Bootstrap support for Q5KGL0 as seed ortholog is 100%.
Bootstrap support for F2SMC2 as seed ortholog is 100%.

Group of orthologs #133. Best score 874 bits
Score difference with first non-orthologous sequence - C.neoformans:874 T.rubrum:874

Q5KN74              	100.00%		F2SE29              	100.00%
Bootstrap support for Q5KN74 as seed ortholog is 100%.
Bootstrap support for F2SE29 as seed ortholog is 100%.

Group of orthologs #134. Best score 873 bits
Score difference with first non-orthologous sequence - C.neoformans:873 T.rubrum:650

Q5KEN3              	100.00%		F2SQE3              	100.00%
Bootstrap support for Q5KEN3 as seed ortholog is 100%.
Bootstrap support for F2SQE3 as seed ortholog is 100%.

Group of orthologs #135. Best score 872 bits
Score difference with first non-orthologous sequence - C.neoformans:872 T.rubrum:872

P0CL88              	100.00%		F2SMH2              	100.00%
Bootstrap support for P0CL88 as seed ortholog is 100%.
Bootstrap support for F2SMH2 as seed ortholog is 100%.

Group of orthologs #136. Best score 872 bits
Score difference with first non-orthologous sequence - C.neoformans:872 T.rubrum:872

Q5KQ25              	100.00%		F2SJQ3              	100.00%
Bootstrap support for Q5KQ25 as seed ortholog is 100%.
Bootstrap support for F2SJQ3 as seed ortholog is 100%.

Group of orthologs #137. Best score 872 bits
Score difference with first non-orthologous sequence - C.neoformans:872 T.rubrum:872

Q5KPH0              	100.00%		F2SWV0              	100.00%
Bootstrap support for Q5KPH0 as seed ortholog is 100%.
Bootstrap support for F2SWV0 as seed ortholog is 100%.

Group of orthologs #138. Best score 871 bits
Score difference with first non-orthologous sequence - C.neoformans:871 T.rubrum:871

Q5KQ07              	100.00%		F2SQP8              	100.00%
Bootstrap support for Q5KQ07 as seed ortholog is 100%.
Bootstrap support for F2SQP8 as seed ortholog is 100%.

Group of orthologs #139. Best score 870 bits
Score difference with first non-orthologous sequence - C.neoformans:366 T.rubrum:703

Q5KEI8              	100.00%		F2SPY2              	100.00%
Bootstrap support for Q5KEI8 as seed ortholog is 100%.
Bootstrap support for F2SPY2 as seed ortholog is 100%.

Group of orthologs #140. Best score 868 bits
Score difference with first non-orthologous sequence - C.neoformans:868 T.rubrum:868

Q5KNE7              	100.00%		F2T0P3              	100.00%
Bootstrap support for Q5KNE7 as seed ortholog is 100%.
Bootstrap support for F2T0P3 as seed ortholog is 100%.

Group of orthologs #141. Best score 866 bits
Score difference with first non-orthologous sequence - C.neoformans:866 T.rubrum:866

Q5K8W5              	100.00%		F2SJJ9              	100.00%
Bootstrap support for Q5K8W5 as seed ortholog is 100%.
Bootstrap support for F2SJJ9 as seed ortholog is 100%.

Group of orthologs #142. Best score 866 bits
Score difference with first non-orthologous sequence - C.neoformans:866 T.rubrum:866

Q5KLP9              	100.00%		F2SR09              	100.00%
Bootstrap support for Q5KLP9 as seed ortholog is 100%.
Bootstrap support for F2SR09 as seed ortholog is 100%.

Group of orthologs #143. Best score 865 bits
Score difference with first non-orthologous sequence - C.neoformans:865 T.rubrum:865

Q5KAX5              	100.00%		F2SRE3              	100.00%
Bootstrap support for Q5KAX5 as seed ortholog is 100%.
Bootstrap support for F2SRE3 as seed ortholog is 100%.

Group of orthologs #144. Best score 857 bits
Score difference with first non-orthologous sequence - C.neoformans:857 T.rubrum:857

Q5KKE9              	100.00%		F2SF39              	100.00%
Bootstrap support for Q5KKE9 as seed ortholog is 100%.
Bootstrap support for F2SF39 as seed ortholog is 100%.

Group of orthologs #145. Best score 857 bits
Score difference with first non-orthologous sequence - C.neoformans:857 T.rubrum:558

P0CN32              	100.00%		F2SWJ7              	100.00%
Bootstrap support for P0CN32 as seed ortholog is 100%.
Bootstrap support for F2SWJ7 as seed ortholog is 100%.

Group of orthologs #146. Best score 856 bits
Score difference with first non-orthologous sequence - C.neoformans:856 T.rubrum:856

P0CR40              	100.00%		F2SFA0              	100.00%
Bootstrap support for P0CR40 as seed ortholog is 100%.
Bootstrap support for F2SFA0 as seed ortholog is 100%.

Group of orthologs #147. Best score 856 bits
Score difference with first non-orthologous sequence - C.neoformans:856 T.rubrum:856

Q5KPQ9              	100.00%		F2SFH6              	100.00%
Bootstrap support for Q5KPQ9 as seed ortholog is 100%.
Bootstrap support for F2SFH6 as seed ortholog is 100%.

Group of orthologs #148. Best score 854 bits
Score difference with first non-orthologous sequence - C.neoformans:854 T.rubrum:854

Q5KFJ3              	100.00%		F2SGB7              	100.00%
Bootstrap support for Q5KFJ3 as seed ortholog is 100%.
Bootstrap support for F2SGB7 as seed ortholog is 100%.

Group of orthologs #149. Best score 852 bits
Score difference with first non-orthologous sequence - C.neoformans:852 T.rubrum:162

Q5KLN9              	100.00%		F2SC05              	100.00%
Bootstrap support for Q5KLN9 as seed ortholog is 100%.
Bootstrap support for F2SC05 as seed ortholog is 99%.

Group of orthologs #150. Best score 849 bits
Score difference with first non-orthologous sequence - C.neoformans:849 T.rubrum:849

Q5KER6              	100.00%		F2SFV0              	100.00%
Bootstrap support for Q5KER6 as seed ortholog is 100%.
Bootstrap support for F2SFV0 as seed ortholog is 100%.

Group of orthologs #151. Best score 845 bits
Score difference with first non-orthologous sequence - C.neoformans:845 T.rubrum:845

Q5KLE4              	100.00%		F2SQ95              	100.00%
Bootstrap support for Q5KLE4 as seed ortholog is 100%.
Bootstrap support for F2SQ95 as seed ortholog is 100%.

Group of orthologs #152. Best score 841 bits
Score difference with first non-orthologous sequence - C.neoformans:180 T.rubrum:57

Q5KLB8              	100.00%		F2SHW9              	100.00%
Bootstrap support for Q5KLB8 as seed ortholog is 99%.
Bootstrap support for F2SHW9 as seed ortholog is 87%.

Group of orthologs #153. Best score 839 bits
Score difference with first non-orthologous sequence - C.neoformans:839 T.rubrum:839

Q5KII0              	100.00%		F2SHE6              	100.00%
Bootstrap support for Q5KII0 as seed ortholog is 100%.
Bootstrap support for F2SHE6 as seed ortholog is 100%.

Group of orthologs #154. Best score 836 bits
Score difference with first non-orthologous sequence - C.neoformans:836 T.rubrum:836

Q5KHK5              	100.00%		F2SH83              	100.00%
Bootstrap support for Q5KHK5 as seed ortholog is 100%.
Bootstrap support for F2SH83 as seed ortholog is 100%.

Group of orthologs #155. Best score 835 bits
Score difference with first non-orthologous sequence - C.neoformans:835 T.rubrum:835

Q5KGL7              	100.00%		F2SJB6              	100.00%
Bootstrap support for Q5KGL7 as seed ortholog is 100%.
Bootstrap support for F2SJB6 as seed ortholog is 100%.

Group of orthologs #156. Best score 832 bits
Score difference with first non-orthologous sequence - C.neoformans:832 T.rubrum:832

Q5KHM9              	100.00%		F2SHM7              	100.00%
Bootstrap support for Q5KHM9 as seed ortholog is 100%.
Bootstrap support for F2SHM7 as seed ortholog is 100%.

Group of orthologs #157. Best score 828 bits
Score difference with first non-orthologous sequence - C.neoformans:828 T.rubrum:828

Q5K9D7              	100.00%		F2SYD2              	100.00%
Bootstrap support for Q5K9D7 as seed ortholog is 100%.
Bootstrap support for F2SYD2 as seed ortholog is 100%.

Group of orthologs #158. Best score 828 bits
Score difference with first non-orthologous sequence - C.neoformans:828 T.rubrum:828

Q5KNM9              	100.00%		F2SNL9              	100.00%
Bootstrap support for Q5KNM9 as seed ortholog is 100%.
Bootstrap support for F2SNL9 as seed ortholog is 100%.

Group of orthologs #159. Best score 827 bits
Score difference with first non-orthologous sequence - C.neoformans:827 T.rubrum:827

P0CQ22              	100.00%		F2STZ2              	100.00%
Bootstrap support for P0CQ22 as seed ortholog is 100%.
Bootstrap support for F2STZ2 as seed ortholog is 100%.

Group of orthologs #160. Best score 827 bits
Score difference with first non-orthologous sequence - C.neoformans:827 T.rubrum:827

Q5KQ47              	100.00%		F2SDL8              	100.00%
Bootstrap support for Q5KQ47 as seed ortholog is 100%.
Bootstrap support for F2SDL8 as seed ortholog is 100%.

Group of orthologs #161. Best score 827 bits
Score difference with first non-orthologous sequence - C.neoformans:827 T.rubrum:827

Q5KKV8              	100.00%		F2SJ76              	100.00%
Bootstrap support for Q5KKV8 as seed ortholog is 100%.
Bootstrap support for F2SJ76 as seed ortholog is 100%.

Group of orthologs #162. Best score 826 bits
Score difference with first non-orthologous sequence - C.neoformans:826 T.rubrum:826

Q5K9S3              	100.00%		F2SPQ6              	100.00%
Bootstrap support for Q5K9S3 as seed ortholog is 100%.
Bootstrap support for F2SPQ6 as seed ortholog is 100%.

Group of orthologs #163. Best score 826 bits
Score difference with first non-orthologous sequence - C.neoformans:826 T.rubrum:826

Q5KI16              	100.00%		F2SI95              	100.00%
Bootstrap support for Q5KI16 as seed ortholog is 100%.
Bootstrap support for F2SI95 as seed ortholog is 100%.

Group of orthologs #164. Best score 825 bits
Score difference with first non-orthologous sequence - C.neoformans:224 T.rubrum:825

Q5KGM4              	100.00%		F2SBX1              	100.00%
Bootstrap support for Q5KGM4 as seed ortholog is 99%.
Bootstrap support for F2SBX1 as seed ortholog is 100%.

Group of orthologs #165. Best score 822 bits
Score difference with first non-orthologous sequence - C.neoformans:822 T.rubrum:548

Q5KQ02              	100.00%		F2SFY8              	100.00%
Bootstrap support for Q5KQ02 as seed ortholog is 100%.
Bootstrap support for F2SFY8 as seed ortholog is 100%.

Group of orthologs #166. Best score 819 bits
Score difference with first non-orthologous sequence - C.neoformans:819 T.rubrum:730

Q5KN88              	100.00%		F2SRP0              	100.00%
Bootstrap support for Q5KN88 as seed ortholog is 100%.
Bootstrap support for F2SRP0 as seed ortholog is 100%.

Group of orthologs #167. Best score 818 bits
Score difference with first non-orthologous sequence - C.neoformans:818 T.rubrum:818

Q5KFC3              	100.00%		F2SBQ7              	100.00%
Bootstrap support for Q5KFC3 as seed ortholog is 100%.
Bootstrap support for F2SBQ7 as seed ortholog is 100%.

Group of orthologs #168. Best score 818 bits
Score difference with first non-orthologous sequence - C.neoformans:818 T.rubrum:818

Q5KB99              	100.00%		F2SUN4              	100.00%
Bootstrap support for Q5KB99 as seed ortholog is 100%.
Bootstrap support for F2SUN4 as seed ortholog is 100%.

Group of orthologs #169. Best score 813 bits
Score difference with first non-orthologous sequence - C.neoformans:813 T.rubrum:813

Q5KL19              	100.00%		F2SSG6              	100.00%
Bootstrap support for Q5KL19 as seed ortholog is 100%.
Bootstrap support for F2SSG6 as seed ortholog is 100%.

Group of orthologs #170. Best score 810 bits
Score difference with first non-orthologous sequence - C.neoformans:810 T.rubrum:810

Q5K9Q2              	100.00%		F2SJT4              	100.00%
Bootstrap support for Q5K9Q2 as seed ortholog is 100%.
Bootstrap support for F2SJT4 as seed ortholog is 100%.

Group of orthologs #171. Best score 809 bits
Score difference with first non-orthologous sequence - C.neoformans:809 T.rubrum:809

Q5KAF1              	100.00%		F2STZ8              	100.00%
Bootstrap support for Q5KAF1 as seed ortholog is 100%.
Bootstrap support for F2STZ8 as seed ortholog is 100%.

Group of orthologs #172. Best score 809 bits
Score difference with first non-orthologous sequence - C.neoformans:721 T.rubrum:809

Q5KLI3              	100.00%		F2SNP9              	100.00%
Bootstrap support for Q5KLI3 as seed ortholog is 100%.
Bootstrap support for F2SNP9 as seed ortholog is 100%.

Group of orthologs #173. Best score 808 bits
Score difference with first non-orthologous sequence - C.neoformans:808 T.rubrum:350

P0CQ16              	100.00%		F2SS61              	100.00%
Bootstrap support for P0CQ16 as seed ortholog is 100%.
Bootstrap support for F2SS61 as seed ortholog is 100%.

Group of orthologs #174. Best score 804 bits
Score difference with first non-orthologous sequence - C.neoformans:604 T.rubrum:619

Q5KMR6              	100.00%		F2SCZ4              	100.00%
Bootstrap support for Q5KMR6 as seed ortholog is 100%.
Bootstrap support for F2SCZ4 as seed ortholog is 100%.

Group of orthologs #175. Best score 801 bits
Score difference with first non-orthologous sequence - C.neoformans:724 T.rubrum:695

P0CM96              	100.00%		F2SUI9              	100.00%
Bootstrap support for P0CM96 as seed ortholog is 100%.
Bootstrap support for F2SUI9 as seed ortholog is 100%.

Group of orthologs #176. Best score 800 bits
Score difference with first non-orthologous sequence - C.neoformans:800 T.rubrum:800

Q5K9A8              	100.00%		F2SWI6              	100.00%
Bootstrap support for Q5K9A8 as seed ortholog is 100%.
Bootstrap support for F2SWI6 as seed ortholog is 100%.

Group of orthologs #177. Best score 797 bits
Score difference with first non-orthologous sequence - C.neoformans:797 T.rubrum:738

Q5KPD7              	100.00%		F2SIL3              	100.00%
Bootstrap support for Q5KPD7 as seed ortholog is 100%.
Bootstrap support for F2SIL3 as seed ortholog is 100%.

Group of orthologs #178. Best score 797 bits
Score difference with first non-orthologous sequence - C.neoformans:797 T.rubrum:797

Q5KGV5              	100.00%		F2SYU1              	100.00%
Bootstrap support for Q5KGV5 as seed ortholog is 100%.
Bootstrap support for F2SYU1 as seed ortholog is 100%.

Group of orthologs #179. Best score 796 bits
Score difference with first non-orthologous sequence - C.neoformans:796 T.rubrum:570

P0CL92              	100.00%		F2SF91              	100.00%
Bootstrap support for P0CL92 as seed ortholog is 100%.
Bootstrap support for F2SF91 as seed ortholog is 100%.

Group of orthologs #180. Best score 795 bits
Score difference with first non-orthologous sequence - C.neoformans:795 T.rubrum:795

Q5K7B4              	100.00%		F2SVR8              	100.00%
Bootstrap support for Q5K7B4 as seed ortholog is 100%.
Bootstrap support for F2SVR8 as seed ortholog is 100%.

Group of orthologs #181. Best score 793 bits
Score difference with first non-orthologous sequence - C.neoformans:793 T.rubrum:793

Q5KLG5              	100.00%		F2SMT8              	100.00%
Bootstrap support for Q5KLG5 as seed ortholog is 100%.
Bootstrap support for F2SMT8 as seed ortholog is 100%.

Group of orthologs #182. Best score 792 bits
Score difference with first non-orthologous sequence - C.neoformans:792 T.rubrum:792

Q5K906              	100.00%		F2SU60              	100.00%
Q5KDA3              	99.56%		
Bootstrap support for Q5K906 as seed ortholog is 100%.
Bootstrap support for F2SU60 as seed ortholog is 100%.

Group of orthologs #183. Best score 792 bits
Score difference with first non-orthologous sequence - C.neoformans:792 T.rubrum:529

Q5KBX3              	100.00%		F2SRN9              	100.00%
Bootstrap support for Q5KBX3 as seed ortholog is 100%.
Bootstrap support for F2SRN9 as seed ortholog is 100%.

Group of orthologs #184. Best score 792 bits
Score difference with first non-orthologous sequence - C.neoformans:792 T.rubrum:792

Q5KNJ3              	100.00%		F2SKS5              	100.00%
Bootstrap support for Q5KNJ3 as seed ortholog is 100%.
Bootstrap support for F2SKS5 as seed ortholog is 100%.

Group of orthologs #185. Best score 792 bits
Score difference with first non-orthologous sequence - C.neoformans:792 T.rubrum:792

Q5KIN6              	100.00%		F2SXD4              	100.00%
Bootstrap support for Q5KIN6 as seed ortholog is 100%.
Bootstrap support for F2SXD4 as seed ortholog is 100%.

Group of orthologs #186. Best score 790 bits
Score difference with first non-orthologous sequence - C.neoformans:512 T.rubrum:790

P0CQ98              	100.00%		F2T0U4              	100.00%
Bootstrap support for P0CQ98 as seed ortholog is 100%.
Bootstrap support for F2T0U4 as seed ortholog is 100%.

Group of orthologs #187. Best score 787 bits
Score difference with first non-orthologous sequence - C.neoformans:787 T.rubrum:787

Q5K8L8              	100.00%		F2SWM3              	100.00%
Bootstrap support for Q5K8L8 as seed ortholog is 100%.
Bootstrap support for F2SWM3 as seed ortholog is 100%.

Group of orthologs #188. Best score 786 bits
Score difference with first non-orthologous sequence - C.neoformans:495 T.rubrum:521

P0CN30              	100.00%		F2SBY9              	100.00%
Bootstrap support for P0CN30 as seed ortholog is 100%.
Bootstrap support for F2SBY9 as seed ortholog is 100%.

Group of orthologs #189. Best score 786 bits
Score difference with first non-orthologous sequence - C.neoformans:628 T.rubrum:786

Q5KEU7              	100.00%		F2SD62              	100.00%
Bootstrap support for Q5KEU7 as seed ortholog is 100%.
Bootstrap support for F2SD62 as seed ortholog is 100%.

Group of orthologs #190. Best score 786 bits
Score difference with first non-orthologous sequence - C.neoformans:786 T.rubrum:786

Q5KBW0              	100.00%		F2SKS3              	100.00%
Bootstrap support for Q5KBW0 as seed ortholog is 100%.
Bootstrap support for F2SKS3 as seed ortholog is 100%.

Group of orthologs #191. Best score 786 bits
Score difference with first non-orthologous sequence - C.neoformans:786 T.rubrum:786

Q5KLW7              	100.00%		F2SPZ3              	100.00%
Bootstrap support for Q5KLW7 as seed ortholog is 100%.
Bootstrap support for F2SPZ3 as seed ortholog is 100%.

Group of orthologs #192. Best score 785 bits
Score difference with first non-orthologous sequence - C.neoformans:785 T.rubrum:785

Q5KFB9              	100.00%		F2SJ48              	100.00%
Bootstrap support for Q5KFB9 as seed ortholog is 100%.
Bootstrap support for F2SJ48 as seed ortholog is 100%.

Group of orthologs #193. Best score 781 bits
Score difference with first non-orthologous sequence - C.neoformans:781 T.rubrum:461

Q5KN48              	100.00%		F2SXA7              	100.00%
Bootstrap support for Q5KN48 as seed ortholog is 100%.
Bootstrap support for F2SXA7 as seed ortholog is 100%.

Group of orthologs #194. Best score 780 bits
Score difference with first non-orthologous sequence - C.neoformans:780 T.rubrum:780

Q5KM64              	100.00%		F2SDG7              	100.00%
Bootstrap support for Q5KM64 as seed ortholog is 100%.
Bootstrap support for F2SDG7 as seed ortholog is 100%.

Group of orthologs #195. Best score 780 bits
Score difference with first non-orthologous sequence - C.neoformans:780 T.rubrum:780

Q5KDZ1              	100.00%		F2SZH7              	100.00%
Bootstrap support for Q5KDZ1 as seed ortholog is 100%.
Bootstrap support for F2SZH7 as seed ortholog is 100%.

Group of orthologs #196. Best score 777 bits
Score difference with first non-orthologous sequence - C.neoformans:777 T.rubrum:777

Q5KAH4              	100.00%		F2SCT0              	100.00%
Bootstrap support for Q5KAH4 as seed ortholog is 100%.
Bootstrap support for F2SCT0 as seed ortholog is 100%.

Group of orthologs #197. Best score 777 bits
Score difference with first non-orthologous sequence - C.neoformans:777 T.rubrum:541

P0CO18              	100.00%		F2SUB0              	100.00%
Bootstrap support for P0CO18 as seed ortholog is 100%.
Bootstrap support for F2SUB0 as seed ortholog is 100%.

Group of orthologs #198. Best score 774 bits
Score difference with first non-orthologous sequence - C.neoformans:774 T.rubrum:774

Q5K9H1              	100.00%		F2SMK7              	100.00%
Bootstrap support for Q5K9H1 as seed ortholog is 100%.
Bootstrap support for F2SMK7 as seed ortholog is 100%.

Group of orthologs #199. Best score 773 bits
Score difference with first non-orthologous sequence - C.neoformans:773 T.rubrum:773

Q5KJT2              	100.00%		F2SEX1              	100.00%
Bootstrap support for Q5KJT2 as seed ortholog is 100%.
Bootstrap support for F2SEX1 as seed ortholog is 100%.

Group of orthologs #200. Best score 765 bits
Score difference with first non-orthologous sequence - C.neoformans:765 T.rubrum:765

Q5K7P1              	100.00%		F2SSN1              	100.00%
Bootstrap support for Q5K7P1 as seed ortholog is 100%.
Bootstrap support for F2SSN1 as seed ortholog is 100%.

Group of orthologs #201. Best score 763 bits
Score difference with first non-orthologous sequence - C.neoformans:763 T.rubrum:763

P0CO08              	100.00%		F2SV49              	100.00%
Bootstrap support for P0CO08 as seed ortholog is 100%.
Bootstrap support for F2SV49 as seed ortholog is 100%.

Group of orthologs #202. Best score 762 bits
Score difference with first non-orthologous sequence - C.neoformans:498 T.rubrum:464

Q5K8Q3              	100.00%		F2SJR7              	100.00%
Bootstrap support for Q5K8Q3 as seed ortholog is 100%.
Bootstrap support for F2SJR7 as seed ortholog is 100%.

Group of orthologs #203. Best score 760 bits
Score difference with first non-orthologous sequence - C.neoformans:760 T.rubrum:760

Q5KHJ6              	100.00%		F2SNT1              	100.00%
Bootstrap support for Q5KHJ6 as seed ortholog is 100%.
Bootstrap support for F2SNT1 as seed ortholog is 100%.

Group of orthologs #204. Best score 759 bits
Score difference with first non-orthologous sequence - C.neoformans:759 T.rubrum:707

P0CO10              	100.00%		F2T0V2              	100.00%
Bootstrap support for P0CO10 as seed ortholog is 100%.
Bootstrap support for F2T0V2 as seed ortholog is 100%.

Group of orthologs #205. Best score 758 bits
Score difference with first non-orthologous sequence - C.neoformans:758 T.rubrum:758

P0CP36              	100.00%		F2SSJ3              	100.00%
Bootstrap support for P0CP36 as seed ortholog is 100%.
Bootstrap support for F2SSJ3 as seed ortholog is 100%.

Group of orthologs #206. Best score 757 bits
Score difference with first non-orthologous sequence - C.neoformans:362 T.rubrum:552

Q5KM76              	100.00%		F2SN88              	100.00%
Bootstrap support for Q5KM76 as seed ortholog is 100%.
Bootstrap support for F2SN88 as seed ortholog is 100%.

Group of orthologs #207. Best score 756 bits
Score difference with first non-orthologous sequence - C.neoformans:756 T.rubrum:756

Q5KIZ1              	100.00%		F2SIZ4              	100.00%
Bootstrap support for Q5KIZ1 as seed ortholog is 100%.
Bootstrap support for F2SIZ4 as seed ortholog is 100%.

Group of orthologs #208. Best score 754 bits
Score difference with first non-orthologous sequence - C.neoformans:754 T.rubrum:520

Q5KAU0              	100.00%		F2SNW6              	100.00%
Bootstrap support for Q5KAU0 as seed ortholog is 100%.
Bootstrap support for F2SNW6 as seed ortholog is 100%.

Group of orthologs #209. Best score 753 bits
Score difference with first non-orthologous sequence - C.neoformans:753 T.rubrum:753

Q5KPI3              	100.00%		F2SYV8              	100.00%
Bootstrap support for Q5KPI3 as seed ortholog is 100%.
Bootstrap support for F2SYV8 as seed ortholog is 100%.

Group of orthologs #210. Best score 751 bits
Score difference with first non-orthologous sequence - C.neoformans:751 T.rubrum:751

P0CN04              	100.00%		F2SH93              	100.00%
Bootstrap support for P0CN04 as seed ortholog is 100%.
Bootstrap support for F2SH93 as seed ortholog is 100%.

Group of orthologs #211. Best score 751 bits
Score difference with first non-orthologous sequence - C.neoformans:751 T.rubrum:751

Q5KFU0              	100.00%		F2SPZ7              	100.00%
Bootstrap support for Q5KFU0 as seed ortholog is 100%.
Bootstrap support for F2SPZ7 as seed ortholog is 100%.

Group of orthologs #212. Best score 751 bits
Score difference with first non-orthologous sequence - C.neoformans:751 T.rubrum:751

Q5KK89              	100.00%		F2SP79              	100.00%
Bootstrap support for Q5KK89 as seed ortholog is 100%.
Bootstrap support for F2SP79 as seed ortholog is 100%.

Group of orthologs #213. Best score 751 bits
Score difference with first non-orthologous sequence - C.neoformans:751 T.rubrum:751

Q5KP40              	100.00%		F2SVT5              	100.00%
Bootstrap support for Q5KP40 as seed ortholog is 100%.
Bootstrap support for F2SVT5 as seed ortholog is 100%.

Group of orthologs #214. Best score 750 bits
Score difference with first non-orthologous sequence - C.neoformans:497 T.rubrum:491

Q5KNV9              	100.00%		F2SX48              	100.00%
                    	       		F2SZW6              	15.69%
                    	       		F2SXD7              	14.17%
                    	       		F2SCG1              	5.87%
Bootstrap support for Q5KNV9 as seed ortholog is 100%.
Bootstrap support for F2SX48 as seed ortholog is 100%.

Group of orthologs #215. Best score 750 bits
Score difference with first non-orthologous sequence - C.neoformans:750 T.rubrum:750

Q5KJX8              	100.00%		F2SV50              	100.00%
Bootstrap support for Q5KJX8 as seed ortholog is 100%.
Bootstrap support for F2SV50 as seed ortholog is 100%.

Group of orthologs #216. Best score 749 bits
Score difference with first non-orthologous sequence - C.neoformans:749 T.rubrum:749

Q5KAC2              	100.00%		F2SN32              	100.00%
Bootstrap support for Q5KAC2 as seed ortholog is 100%.
Bootstrap support for F2SN32 as seed ortholog is 100%.

Group of orthologs #217. Best score 742 bits
Score difference with first non-orthologous sequence - C.neoformans:742 T.rubrum:252

Q5K9H6              	100.00%		F2SR11              	100.00%
Bootstrap support for Q5K9H6 as seed ortholog is 100%.
Bootstrap support for F2SR11 as seed ortholog is 99%.

Group of orthologs #218. Best score 742 bits
Score difference with first non-orthologous sequence - C.neoformans:742 T.rubrum:742

Q5KL42              	100.00%		F2SGL2              	100.00%
Bootstrap support for Q5KL42 as seed ortholog is 100%.
Bootstrap support for F2SGL2 as seed ortholog is 100%.

Group of orthologs #219. Best score 742 bits
Score difference with first non-orthologous sequence - C.neoformans:742 T.rubrum:742

Q5KGM7              	100.00%		F2T162              	100.00%
Bootstrap support for Q5KGM7 as seed ortholog is 100%.
Bootstrap support for F2T162 as seed ortholog is 100%.

Group of orthologs #220. Best score 741 bits
Score difference with first non-orthologous sequence - C.neoformans:741 T.rubrum:606

Q5KPJ5              	100.00%		F2SF34              	100.00%
Bootstrap support for Q5KPJ5 as seed ortholog is 100%.
Bootstrap support for F2SF34 as seed ortholog is 100%.

Group of orthologs #221. Best score 740 bits
Score difference with first non-orthologous sequence - C.neoformans:740 T.rubrum:740

Q5KAN4              	100.00%		F2SSI3              	100.00%
Bootstrap support for Q5KAN4 as seed ortholog is 100%.
Bootstrap support for F2SSI3 as seed ortholog is 100%.

Group of orthologs #222. Best score 739 bits
Score difference with first non-orthologous sequence - C.neoformans:450 T.rubrum:485

P0CQ76              	100.00%		F2SMH5              	100.00%
Bootstrap support for P0CQ76 as seed ortholog is 100%.
Bootstrap support for F2SMH5 as seed ortholog is 100%.

Group of orthologs #223. Best score 739 bits
Score difference with first non-orthologous sequence - C.neoformans:739 T.rubrum:739

Q5KFS5              	100.00%		F2SMP0              	100.00%
Bootstrap support for Q5KFS5 as seed ortholog is 100%.
Bootstrap support for F2SMP0 as seed ortholog is 100%.

Group of orthologs #224. Best score 739 bits
Score difference with first non-orthologous sequence - C.neoformans:739 T.rubrum:739

Q5KEF7              	100.00%		F2ST65              	100.00%
Bootstrap support for Q5KEF7 as seed ortholog is 100%.
Bootstrap support for F2ST65 as seed ortholog is 100%.

Group of orthologs #225. Best score 733 bits
Score difference with first non-orthologous sequence - C.neoformans:733 T.rubrum:733

Q5K7L0              	100.00%		F2SYK2              	100.00%
Bootstrap support for Q5K7L0 as seed ortholog is 100%.
Bootstrap support for F2SYK2 as seed ortholog is 100%.

Group of orthologs #226. Best score 730 bits
Score difference with first non-orthologous sequence - C.neoformans:730 T.rubrum:730

Q5K8H1              	100.00%		F2SN84              	100.00%
Bootstrap support for Q5K8H1 as seed ortholog is 100%.
Bootstrap support for F2SN84 as seed ortholog is 100%.

Group of orthologs #227. Best score 730 bits
Score difference with first non-orthologous sequence - C.neoformans:730 T.rubrum:730

Q5KM37              	100.00%		F2SZA7              	100.00%
Bootstrap support for Q5KM37 as seed ortholog is 100%.
Bootstrap support for F2SZA7 as seed ortholog is 100%.

Group of orthologs #228. Best score 730 bits
Score difference with first non-orthologous sequence - C.neoformans:730 T.rubrum:730

Q5KNE3              	100.00%		F2SY45              	100.00%
Bootstrap support for Q5KNE3 as seed ortholog is 100%.
Bootstrap support for F2SY45 as seed ortholog is 100%.

Group of orthologs #229. Best score 728 bits
Score difference with first non-orthologous sequence - C.neoformans:171 T.rubrum:336

Q5KB77              	100.00%		F2STL2              	100.00%
Q5KEM6              	27.59%		
Bootstrap support for Q5KB77 as seed ortholog is 99%.
Bootstrap support for F2STL2 as seed ortholog is 100%.

Group of orthologs #230. Best score 727 bits
Score difference with first non-orthologous sequence - C.neoformans:727 T.rubrum:727

Q5K9B2              	100.00%		F2SBN7              	100.00%
Bootstrap support for Q5K9B2 as seed ortholog is 100%.
Bootstrap support for F2SBN7 as seed ortholog is 100%.

Group of orthologs #231. Best score 727 bits
Score difference with first non-orthologous sequence - C.neoformans:455 T.rubrum:378

P0CQ74              	100.00%		F2SGT2              	100.00%
Bootstrap support for P0CQ74 as seed ortholog is 100%.
Bootstrap support for F2SGT2 as seed ortholog is 100%.

Group of orthologs #232. Best score 726 bits
Score difference with first non-orthologous sequence - C.neoformans:726 T.rubrum:726

Q5KHK8              	100.00%		F2SXU6              	100.00%
Bootstrap support for Q5KHK8 as seed ortholog is 100%.
Bootstrap support for F2SXU6 as seed ortholog is 100%.

Group of orthologs #233. Best score 724 bits
Score difference with first non-orthologous sequence - C.neoformans:444 T.rubrum:386

Q5KKP2              	100.00%		F2SFL9              	100.00%
Bootstrap support for Q5KKP2 as seed ortholog is 100%.
Bootstrap support for F2SFL9 as seed ortholog is 100%.

Group of orthologs #234. Best score 724 bits
Score difference with first non-orthologous sequence - C.neoformans:175 T.rubrum:368

Q5KKE7              	100.00%		F2SZD3              	100.00%
Bootstrap support for Q5KKE7 as seed ortholog is 100%.
Bootstrap support for F2SZD3 as seed ortholog is 100%.

Group of orthologs #235. Best score 722 bits
Score difference with first non-orthologous sequence - C.neoformans:722 T.rubrum:722

Q5K9E9              	100.00%		F2SCL5              	100.00%
Bootstrap support for Q5K9E9 as seed ortholog is 100%.
Bootstrap support for F2SCL5 as seed ortholog is 100%.

Group of orthologs #236. Best score 720 bits
Score difference with first non-orthologous sequence - C.neoformans:720 T.rubrum:525

Q5K9R3              	100.00%		F2SKQ0              	100.00%
Bootstrap support for Q5K9R3 as seed ortholog is 100%.
Bootstrap support for F2SKQ0 as seed ortholog is 100%.

Group of orthologs #237. Best score 718 bits
Score difference with first non-orthologous sequence - C.neoformans:481 T.rubrum:124

Q5KCL8              	100.00%		F2SM32              	100.00%
Bootstrap support for Q5KCL8 as seed ortholog is 100%.
Bootstrap support for F2SM32 as seed ortholog is 99%.

Group of orthologs #238. Best score 716 bits
Score difference with first non-orthologous sequence - C.neoformans:567 T.rubrum:716

Q5KEQ3              	100.00%		F2SYL2              	100.00%
Bootstrap support for Q5KEQ3 as seed ortholog is 100%.
Bootstrap support for F2SYL2 as seed ortholog is 100%.

Group of orthologs #239. Best score 711 bits
Score difference with first non-orthologous sequence - C.neoformans:711 T.rubrum:711

Q5KPJ1              	100.00%		F2SVQ2              	100.00%
Bootstrap support for Q5KPJ1 as seed ortholog is 100%.
Bootstrap support for F2SVQ2 as seed ortholog is 100%.

Group of orthologs #240. Best score 709 bits
Score difference with first non-orthologous sequence - C.neoformans:709 T.rubrum:709

Q5KBI1              	100.00%		F2SE59              	100.00%
Bootstrap support for Q5KBI1 as seed ortholog is 100%.
Bootstrap support for F2SE59 as seed ortholog is 100%.

Group of orthologs #241. Best score 708 bits
Score difference with first non-orthologous sequence - C.neoformans:708 T.rubrum:708

Q5KIL6              	100.00%		F2T1A8              	100.00%
Bootstrap support for Q5KIL6 as seed ortholog is 100%.
Bootstrap support for F2T1A8 as seed ortholog is 100%.

Group of orthologs #242. Best score 705 bits
Score difference with first non-orthologous sequence - C.neoformans:705 T.rubrum:705

Q5K9K1              	100.00%		F2SI28              	100.00%
Bootstrap support for Q5K9K1 as seed ortholog is 100%.
Bootstrap support for F2SI28 as seed ortholog is 100%.

Group of orthologs #243. Best score 705 bits
Score difference with first non-orthologous sequence - C.neoformans:705 T.rubrum:705

Q5KKB8              	100.00%		F2SIN5              	100.00%
Bootstrap support for Q5KKB8 as seed ortholog is 100%.
Bootstrap support for F2SIN5 as seed ortholog is 100%.

Group of orthologs #244. Best score 704 bits
Score difference with first non-orthologous sequence - C.neoformans:551 T.rubrum:704

P0CM02              	100.00%		F2SVJ7              	100.00%
Bootstrap support for P0CM02 as seed ortholog is 100%.
Bootstrap support for F2SVJ7 as seed ortholog is 100%.

Group of orthologs #245. Best score 703 bits
Score difference with first non-orthologous sequence - C.neoformans:703 T.rubrum:703

Q5KCT5              	100.00%		F2SKR2              	100.00%
Bootstrap support for Q5KCT5 as seed ortholog is 100%.
Bootstrap support for F2SKR2 as seed ortholog is 100%.

Group of orthologs #246. Best score 698 bits
Score difference with first non-orthologous sequence - C.neoformans:698 T.rubrum:698

Q5KLI4              	100.00%		F2SEP4              	100.00%
Bootstrap support for Q5KLI4 as seed ortholog is 100%.
Bootstrap support for F2SEP4 as seed ortholog is 100%.

Group of orthologs #247. Best score 695 bits
Score difference with first non-orthologous sequence - C.neoformans:695 T.rubrum:357

Q5KMU3              	100.00%		F2SEP8              	100.00%
Bootstrap support for Q5KMU3 as seed ortholog is 100%.
Bootstrap support for F2SEP8 as seed ortholog is 100%.

Group of orthologs #248. Best score 693 bits
Score difference with first non-orthologous sequence - C.neoformans:693 T.rubrum:693

Q5KAC5              	100.00%		F2SDK6              	100.00%
Bootstrap support for Q5KAC5 as seed ortholog is 100%.
Bootstrap support for F2SDK6 as seed ortholog is 100%.

Group of orthologs #249. Best score 693 bits
Score difference with first non-orthologous sequence - C.neoformans:693 T.rubrum:693

Q5KB11              	100.00%		F2SK94              	100.00%
Bootstrap support for Q5KB11 as seed ortholog is 100%.
Bootstrap support for F2SK94 as seed ortholog is 100%.

Group of orthologs #250. Best score 692 bits
Score difference with first non-orthologous sequence - C.neoformans:600 T.rubrum:384

Q5KBB1              	100.00%		F2SDN0              	100.00%
Bootstrap support for Q5KBB1 as seed ortholog is 100%.
Bootstrap support for F2SDN0 as seed ortholog is 100%.

Group of orthologs #251. Best score 692 bits
Score difference with first non-orthologous sequence - C.neoformans:692 T.rubrum:692

Q5KLA1              	100.00%		F2SUS3              	100.00%
Bootstrap support for Q5KLA1 as seed ortholog is 100%.
Bootstrap support for F2SUS3 as seed ortholog is 100%.

Group of orthologs #252. Best score 689 bits
Score difference with first non-orthologous sequence - C.neoformans:689 T.rubrum:689

Q5KE94              	100.00%		F2SJ92              	100.00%
Bootstrap support for Q5KE94 as seed ortholog is 100%.
Bootstrap support for F2SJ92 as seed ortholog is 100%.

Group of orthologs #253. Best score 688 bits
Score difference with first non-orthologous sequence - C.neoformans:688 T.rubrum:688

Q5K9N8              	100.00%		F2SL26              	100.00%
Bootstrap support for Q5K9N8 as seed ortholog is 100%.
Bootstrap support for F2SL26 as seed ortholog is 100%.

Group of orthologs #254. Best score 688 bits
Score difference with first non-orthologous sequence - C.neoformans:688 T.rubrum:688

Q5KP44              	100.00%		F2SWC7              	100.00%
Bootstrap support for Q5KP44 as seed ortholog is 100%.
Bootstrap support for F2SWC7 as seed ortholog is 100%.

Group of orthologs #255. Best score 687 bits
Score difference with first non-orthologous sequence - C.neoformans:687 T.rubrum:462

Q5K745              	100.00%		F2SP70              	100.00%
Bootstrap support for Q5K745 as seed ortholog is 100%.
Bootstrap support for F2SP70 as seed ortholog is 100%.

Group of orthologs #256. Best score 686 bits
Score difference with first non-orthologous sequence - C.neoformans:686 T.rubrum:686

Q5KK44              	100.00%		F2SP18              	100.00%
Q5KK43              	44.87%		
Bootstrap support for Q5KK44 as seed ortholog is 100%.
Bootstrap support for F2SP18 as seed ortholog is 100%.

Group of orthologs #257. Best score 686 bits
Score difference with first non-orthologous sequence - C.neoformans:686 T.rubrum:325

Q5K722              	100.00%		F2SY86              	100.00%
Bootstrap support for Q5K722 as seed ortholog is 100%.
Bootstrap support for F2SY86 as seed ortholog is 100%.

Group of orthologs #258. Best score 686 bits
Score difference with first non-orthologous sequence - C.neoformans:686 T.rubrum:686

Q5KJX1              	100.00%		F2SRG5              	100.00%
Bootstrap support for Q5KJX1 as seed ortholog is 100%.
Bootstrap support for F2SRG5 as seed ortholog is 100%.

Group of orthologs #259. Best score 680 bits
Score difference with first non-orthologous sequence - C.neoformans:680 T.rubrum:680

Q5KQ28              	100.00%		F2SYW2              	100.00%
Bootstrap support for Q5KQ28 as seed ortholog is 100%.
Bootstrap support for F2SYW2 as seed ortholog is 100%.

Group of orthologs #260. Best score 679 bits
Score difference with first non-orthologous sequence - C.neoformans:679 T.rubrum:679

Q5KLT1              	100.00%		F2SCJ4              	100.00%
Bootstrap support for Q5KLT1 as seed ortholog is 100%.
Bootstrap support for F2SCJ4 as seed ortholog is 100%.

Group of orthologs #261. Best score 679 bits
Score difference with first non-orthologous sequence - C.neoformans:679 T.rubrum:464

Q5KPA1              	100.00%		F2SD18              	100.00%
Bootstrap support for Q5KPA1 as seed ortholog is 100%.
Bootstrap support for F2SD18 as seed ortholog is 100%.

Group of orthologs #262. Best score 678 bits
Score difference with first non-orthologous sequence - C.neoformans:173 T.rubrum:342

Q5KEI6              	100.00%		F2SVA9              	100.00%
Bootstrap support for Q5KEI6 as seed ortholog is 99%.
Bootstrap support for F2SVA9 as seed ortholog is 100%.

Group of orthologs #263. Best score 677 bits
Score difference with first non-orthologous sequence - C.neoformans:677 T.rubrum:581

Q5KAX4              	100.00%		F2SSX6              	100.00%
Bootstrap support for Q5KAX4 as seed ortholog is 100%.
Bootstrap support for F2SSX6 as seed ortholog is 100%.

Group of orthologs #264. Best score 677 bits
Score difference with first non-orthologous sequence - C.neoformans:677 T.rubrum:677

Q5KML9              	100.00%		F2SI12              	100.00%
Bootstrap support for Q5KML9 as seed ortholog is 100%.
Bootstrap support for F2SI12 as seed ortholog is 100%.

Group of orthologs #265. Best score 676 bits
Score difference with first non-orthologous sequence - C.neoformans:676 T.rubrum:676

Q5KCG5              	100.00%		F2SNT5              	100.00%
Bootstrap support for Q5KCG5 as seed ortholog is 100%.
Bootstrap support for F2SNT5 as seed ortholog is 100%.

Group of orthologs #266. Best score 676 bits
Score difference with first non-orthologous sequence - C.neoformans:676 T.rubrum:676

Q5KDY7              	100.00%		F2SZI3              	100.00%
Bootstrap support for Q5KDY7 as seed ortholog is 100%.
Bootstrap support for F2SZI3 as seed ortholog is 100%.

Group of orthologs #267. Best score 672 bits
Score difference with first non-orthologous sequence - C.neoformans:672 T.rubrum:672

Q5K7K5              	100.00%		F2SBJ8              	100.00%
Bootstrap support for Q5K7K5 as seed ortholog is 100%.
Bootstrap support for F2SBJ8 as seed ortholog is 100%.

Group of orthologs #268. Best score 672 bits
Score difference with first non-orthologous sequence - C.neoformans:672 T.rubrum:581

Q5K6Z8              	100.00%		F2STS1              	100.00%
Bootstrap support for Q5K6Z8 as seed ortholog is 100%.
Bootstrap support for F2STS1 as seed ortholog is 100%.

Group of orthologs #269. Best score 672 bits
Score difference with first non-orthologous sequence - C.neoformans:672 T.rubrum:672

Q5KIH6              	100.00%		F2SND0              	100.00%
Bootstrap support for Q5KIH6 as seed ortholog is 100%.
Bootstrap support for F2SND0 as seed ortholog is 100%.

Group of orthologs #270. Best score 671 bits
Score difference with first non-orthologous sequence - C.neoformans:486 T.rubrum:414

Q5K918              	100.00%		F2SK97              	100.00%
Bootstrap support for Q5K918 as seed ortholog is 100%.
Bootstrap support for F2SK97 as seed ortholog is 100%.

Group of orthologs #271. Best score 671 bits
Score difference with first non-orthologous sequence - C.neoformans:297 T.rubrum:29

Q5KM62              	100.00%		F2SG63              	100.00%
Bootstrap support for Q5KM62 as seed ortholog is 100%.
Bootstrap support for F2SG63 as seed ortholog is 80%.

Group of orthologs #272. Best score 669 bits
Score difference with first non-orthologous sequence - C.neoformans:669 T.rubrum:669

Q5KHN9              	100.00%		F2SGD5              	100.00%
Bootstrap support for Q5KHN9 as seed ortholog is 100%.
Bootstrap support for F2SGD5 as seed ortholog is 100%.

Group of orthologs #273. Best score 668 bits
Score difference with first non-orthologous sequence - C.neoformans:478 T.rubrum:512

P0CQ84              	100.00%		F2SII4              	100.00%
Bootstrap support for P0CQ84 as seed ortholog is 100%.
Bootstrap support for F2SII4 as seed ortholog is 100%.

Group of orthologs #274. Best score 666 bits
Score difference with first non-orthologous sequence - C.neoformans:666 T.rubrum:666

P0CS78              	100.00%		F2SV32              	100.00%
Bootstrap support for P0CS78 as seed ortholog is 100%.
Bootstrap support for F2SV32 as seed ortholog is 100%.

Group of orthologs #275. Best score 664 bits
Score difference with first non-orthologous sequence - C.neoformans:664 T.rubrum:664

Q5KIA5              	100.00%		F2SES5              	100.00%
Bootstrap support for Q5KIA5 as seed ortholog is 100%.
Bootstrap support for F2SES5 as seed ortholog is 100%.

Group of orthologs #276. Best score 662 bits
Score difference with first non-orthologous sequence - C.neoformans:554 T.rubrum:662

Q5KCJ2              	100.00%		F2SS43              	100.00%
Bootstrap support for Q5KCJ2 as seed ortholog is 100%.
Bootstrap support for F2SS43 as seed ortholog is 100%.

Group of orthologs #277. Best score 660 bits
Score difference with first non-orthologous sequence - C.neoformans:660 T.rubrum:660

Q5KHN7              	100.00%		F2SI59              	100.00%
Bootstrap support for Q5KHN7 as seed ortholog is 100%.
Bootstrap support for F2SI59 as seed ortholog is 100%.

Group of orthologs #278. Best score 659 bits
Score difference with first non-orthologous sequence - C.neoformans:659 T.rubrum:659

Q5KL65              	100.00%		F2SG12              	100.00%
Bootstrap support for Q5KL65 as seed ortholog is 100%.
Bootstrap support for F2SG12 as seed ortholog is 100%.

Group of orthologs #279. Best score 659 bits
Score difference with first non-orthologous sequence - C.neoformans:659 T.rubrum:659

Q5KF83              	100.00%		F2SNZ2              	100.00%
Bootstrap support for Q5KF83 as seed ortholog is 100%.
Bootstrap support for F2SNZ2 as seed ortholog is 100%.

Group of orthologs #280. Best score 659 bits
Score difference with first non-orthologous sequence - C.neoformans:478 T.rubrum:510

P0CQ72              	100.00%		F2SYT9              	100.00%
Bootstrap support for P0CQ72 as seed ortholog is 100%.
Bootstrap support for F2SYT9 as seed ortholog is 100%.

Group of orthologs #281. Best score 658 bits
Score difference with first non-orthologous sequence - C.neoformans:658 T.rubrum:658

P0CO94              	100.00%		F2SQW7              	100.00%
Bootstrap support for P0CO94 as seed ortholog is 100%.
Bootstrap support for F2SQW7 as seed ortholog is 100%.

Group of orthologs #282. Best score 658 bits
Score difference with first non-orthologous sequence - C.neoformans:262 T.rubrum:214

Q5KMH9              	100.00%		F2SLA7              	100.00%
Bootstrap support for Q5KMH9 as seed ortholog is 100%.
Bootstrap support for F2SLA7 as seed ortholog is 99%.

Group of orthologs #283. Best score 657 bits
Score difference with first non-orthologous sequence - C.neoformans:390 T.rubrum:331

Q5K8B0              	100.00%		F2SFW6              	100.00%
Q5KNR3              	65.72%		
Bootstrap support for Q5K8B0 as seed ortholog is 100%.
Bootstrap support for F2SFW6 as seed ortholog is 100%.

Group of orthologs #284. Best score 657 bits
Score difference with first non-orthologous sequence - C.neoformans:362 T.rubrum:402

Q5K9Z4              	100.00%		F2SPA7              	100.00%
Bootstrap support for Q5K9Z4 as seed ortholog is 100%.
Bootstrap support for F2SPA7 as seed ortholog is 100%.

Group of orthologs #285. Best score 657 bits
Score difference with first non-orthologous sequence - C.neoformans:657 T.rubrum:657

Q5KCZ2              	100.00%		F2SV10              	100.00%
Bootstrap support for Q5KCZ2 as seed ortholog is 100%.
Bootstrap support for F2SV10 as seed ortholog is 100%.

Group of orthologs #286. Best score 656 bits
Score difference with first non-orthologous sequence - C.neoformans:656 T.rubrum:656

P0CQ82              	100.00%		F2SI21              	100.00%
Bootstrap support for P0CQ82 as seed ortholog is 100%.
Bootstrap support for F2SI21 as seed ortholog is 100%.

Group of orthologs #287. Best score 656 bits
Score difference with first non-orthologous sequence - C.neoformans:656 T.rubrum:656

P0CS34              	100.00%		F2SLA3              	100.00%
Bootstrap support for P0CS34 as seed ortholog is 100%.
Bootstrap support for F2SLA3 as seed ortholog is 100%.

Group of orthologs #288. Best score 656 bits
Score difference with first non-orthologous sequence - C.neoformans:656 T.rubrum:656

Q5K6X3              	100.00%		F2SQ81              	100.00%
Bootstrap support for Q5K6X3 as seed ortholog is 100%.
Bootstrap support for F2SQ81 as seed ortholog is 100%.

Group of orthologs #289. Best score 655 bits
Score difference with first non-orthologous sequence - C.neoformans:655 T.rubrum:328

Q5KI85              	100.00%		F2SJS9              	100.00%
Bootstrap support for Q5KI85 as seed ortholog is 100%.
Bootstrap support for F2SJS9 as seed ortholog is 100%.

Group of orthologs #290. Best score 654 bits
Score difference with first non-orthologous sequence - C.neoformans:654 T.rubrum:654

Q5KCZ4              	100.00%		F2SMU7              	100.00%
Bootstrap support for Q5KCZ4 as seed ortholog is 100%.
Bootstrap support for F2SMU7 as seed ortholog is 100%.

Group of orthologs #291. Best score 654 bits
Score difference with first non-orthologous sequence - C.neoformans:654 T.rubrum:654

Q5KP26              	100.00%		F2SEV9              	100.00%
Bootstrap support for Q5KP26 as seed ortholog is 100%.
Bootstrap support for F2SEV9 as seed ortholog is 100%.

Group of orthologs #292. Best score 652 bits
Score difference with first non-orthologous sequence - C.neoformans:652 T.rubrum:652

Q5KD10              	100.00%		F2SBP8              	100.00%
Bootstrap support for Q5KD10 as seed ortholog is 100%.
Bootstrap support for F2SBP8 as seed ortholog is 100%.

Group of orthologs #293. Best score 651 bits
Score difference with first non-orthologous sequence - C.neoformans:651 T.rubrum:152

Q5KD48              	100.00%		F2SDG8              	100.00%
Bootstrap support for Q5KD48 as seed ortholog is 100%.
Bootstrap support for F2SDG8 as seed ortholog is 99%.

Group of orthologs #294. Best score 651 bits
Score difference with first non-orthologous sequence - C.neoformans:228 T.rubrum:509

Q5KLV0              	100.00%		F2SLP1              	100.00%
Bootstrap support for Q5KLV0 as seed ortholog is 99%.
Bootstrap support for F2SLP1 as seed ortholog is 100%.

Group of orthologs #295. Best score 651 bits
Score difference with first non-orthologous sequence - C.neoformans:651 T.rubrum:651

Q5K8I5              	100.00%		F2SZD1              	100.00%
Bootstrap support for Q5K8I5 as seed ortholog is 100%.
Bootstrap support for F2SZD1 as seed ortholog is 100%.

Group of orthologs #296. Best score 649 bits
Score difference with first non-orthologous sequence - C.neoformans:649 T.rubrum:649

Q5KKV6              	100.00%		F2SDX2              	100.00%
Bootstrap support for Q5KKV6 as seed ortholog is 100%.
Bootstrap support for F2SDX2 as seed ortholog is 100%.

Group of orthologs #297. Best score 649 bits
Score difference with first non-orthologous sequence - C.neoformans:649 T.rubrum:183

Q5KQ45              	100.00%		F2SPX7              	100.00%
Bootstrap support for Q5KQ45 as seed ortholog is 100%.
Bootstrap support for F2SPX7 as seed ortholog is 100%.

Group of orthologs #298. Best score 648 bits
Score difference with first non-orthologous sequence - C.neoformans:648 T.rubrum:648

Q5KDL3              	100.00%		F2SJ91              	100.00%
Bootstrap support for Q5KDL3 as seed ortholog is 100%.
Bootstrap support for F2SJ91 as seed ortholog is 100%.

Group of orthologs #299. Best score 648 bits
Score difference with first non-orthologous sequence - C.neoformans:648 T.rubrum:648

Q5KGN3              	100.00%		F2SU62              	100.00%
Bootstrap support for Q5KGN3 as seed ortholog is 100%.
Bootstrap support for F2SU62 as seed ortholog is 100%.

Group of orthologs #300. Best score 646 bits
Score difference with first non-orthologous sequence - C.neoformans:646 T.rubrum:164

Q5KD59              	100.00%		F2SEY2              	100.00%
Bootstrap support for Q5KD59 as seed ortholog is 100%.
Bootstrap support for F2SEY2 as seed ortholog is 99%.

Group of orthologs #301. Best score 646 bits
Score difference with first non-orthologous sequence - C.neoformans:646 T.rubrum:561

Q5KLS2              	100.00%		F2SPM8              	100.00%
Bootstrap support for Q5KLS2 as seed ortholog is 100%.
Bootstrap support for F2SPM8 as seed ortholog is 100%.

Group of orthologs #302. Best score 646 bits
Score difference with first non-orthologous sequence - C.neoformans:646 T.rubrum:646

Q5KI64              	100.00%		F2SXB0              	100.00%
Bootstrap support for Q5KI64 as seed ortholog is 100%.
Bootstrap support for F2SXB0 as seed ortholog is 100%.

Group of orthologs #303. Best score 645 bits
Score difference with first non-orthologous sequence - C.neoformans:645 T.rubrum:645

Q5KGD7              	100.00%		F2SXP9              	100.00%
Bootstrap support for Q5KGD7 as seed ortholog is 100%.
Bootstrap support for F2SXP9 as seed ortholog is 100%.

Group of orthologs #304. Best score 643 bits
Score difference with first non-orthologous sequence - C.neoformans:643 T.rubrum:643

Q5KGN2              	100.00%		F2SPJ4              	100.00%
Bootstrap support for Q5KGN2 as seed ortholog is 100%.
Bootstrap support for F2SPJ4 as seed ortholog is 100%.

Group of orthologs #305. Best score 641 bits
Score difference with first non-orthologous sequence - C.neoformans:641 T.rubrum:641

Q5KMG4              	100.00%		F2SVT4              	100.00%
Bootstrap support for Q5KMG4 as seed ortholog is 100%.
Bootstrap support for F2SVT4 as seed ortholog is 100%.

Group of orthologs #306. Best score 636 bits
Score difference with first non-orthologous sequence - C.neoformans:636 T.rubrum:636

P0CR72              	100.00%		F2SHL9              	100.00%
Bootstrap support for P0CR72 as seed ortholog is 100%.
Bootstrap support for F2SHL9 as seed ortholog is 100%.

Group of orthologs #307. Best score 636 bits
Score difference with first non-orthologous sequence - C.neoformans:636 T.rubrum:636

Q5KJH8              	100.00%		F2SHH0              	100.00%
Bootstrap support for Q5KJH8 as seed ortholog is 100%.
Bootstrap support for F2SHH0 as seed ortholog is 100%.

Group of orthologs #308. Best score 636 bits
Score difference with first non-orthologous sequence - C.neoformans:636 T.rubrum:636

Q5KEL8              	100.00%		F2SY26              	100.00%
Bootstrap support for Q5KEL8 as seed ortholog is 100%.
Bootstrap support for F2SY26 as seed ortholog is 100%.

Group of orthologs #309. Best score 635 bits
Score difference with first non-orthologous sequence - C.neoformans:635 T.rubrum:586

Q5K7B5              	100.00%		F2SF75              	100.00%
Bootstrap support for Q5K7B5 as seed ortholog is 100%.
Bootstrap support for F2SF75 as seed ortholog is 100%.

Group of orthologs #310. Best score 635 bits
Score difference with first non-orthologous sequence - C.neoformans:635 T.rubrum:635

P0CN86              	100.00%		F2SZ55              	100.00%
Bootstrap support for P0CN86 as seed ortholog is 100%.
Bootstrap support for F2SZ55 as seed ortholog is 100%.

Group of orthologs #311. Best score 634 bits
Score difference with first non-orthologous sequence - C.neoformans:634 T.rubrum:456

Q5KHC6              	100.00%		F2SHT1              	100.00%
Bootstrap support for Q5KHC6 as seed ortholog is 100%.
Bootstrap support for F2SHT1 as seed ortholog is 100%.

Group of orthologs #312. Best score 634 bits
Score difference with first non-orthologous sequence - C.neoformans:357 T.rubrum:430

P0CQ88              	100.00%		F2SW47              	100.00%
Bootstrap support for P0CQ88 as seed ortholog is 100%.
Bootstrap support for F2SW47 as seed ortholog is 100%.

Group of orthologs #313. Best score 633 bits
Score difference with first non-orthologous sequence - C.neoformans:633 T.rubrum:633

Q5KEN6              	100.00%		F2SWD4              	100.00%
Bootstrap support for Q5KEN6 as seed ortholog is 100%.
Bootstrap support for F2SWD4 as seed ortholog is 100%.

Group of orthologs #314. Best score 632 bits
Score difference with first non-orthologous sequence - C.neoformans:632 T.rubrum:389

Q5KJ82              	100.00%		F2SPJ0              	100.00%
Bootstrap support for Q5KJ82 as seed ortholog is 100%.
Bootstrap support for F2SPJ0 as seed ortholog is 100%.

Group of orthologs #315. Best score 631 bits
Score difference with first non-orthologous sequence - C.neoformans:631 T.rubrum:631

P0CO92              	100.00%		F2SGB3              	100.00%
Bootstrap support for P0CO92 as seed ortholog is 100%.
Bootstrap support for F2SGB3 as seed ortholog is 100%.

Group of orthologs #316. Best score 629 bits
Score difference with first non-orthologous sequence - C.neoformans:199 T.rubrum:263

Q5K8Q9              	100.00%		F2SQ86              	100.00%
Bootstrap support for Q5K8Q9 as seed ortholog is 99%.
Bootstrap support for F2SQ86 as seed ortholog is 99%.

Group of orthologs #317. Best score 629 bits
Score difference with first non-orthologous sequence - C.neoformans:629 T.rubrum:327

Q5KM82              	100.00%		F2SHV3              	100.00%
Bootstrap support for Q5KM82 as seed ortholog is 100%.
Bootstrap support for F2SHV3 as seed ortholog is 100%.

Group of orthologs #318. Best score 629 bits
Score difference with first non-orthologous sequence - C.neoformans:629 T.rubrum:629

Q5KKG6              	100.00%		F2STM3              	100.00%
Bootstrap support for Q5KKG6 as seed ortholog is 100%.
Bootstrap support for F2STM3 as seed ortholog is 100%.

Group of orthologs #319. Best score 628 bits
Score difference with first non-orthologous sequence - C.neoformans:332 T.rubrum:536

P0CP68              	100.00%		F2SP73              	100.00%
Bootstrap support for P0CP68 as seed ortholog is 100%.
Bootstrap support for F2SP73 as seed ortholog is 100%.

Group of orthologs #320. Best score 628 bits
Score difference with first non-orthologous sequence - C.neoformans:628 T.rubrum:564

Q5KKR7              	100.00%		F2SFM7              	100.00%
Bootstrap support for Q5KKR7 as seed ortholog is 100%.
Bootstrap support for F2SFM7 as seed ortholog is 100%.

Group of orthologs #321. Best score 628 bits
Score difference with first non-orthologous sequence - C.neoformans:628 T.rubrum:628

Q5KGF8              	100.00%		F2T143              	100.00%
Bootstrap support for Q5KGF8 as seed ortholog is 100%.
Bootstrap support for F2T143 as seed ortholog is 100%.

Group of orthologs #322. Best score 627 bits
Score difference with first non-orthologous sequence - C.neoformans:494 T.rubrum:496

Q5KCW4              	100.00%		F2T0J6              	100.00%
                    	       		F2SZD4              	21.75%
Bootstrap support for Q5KCW4 as seed ortholog is 100%.
Bootstrap support for F2T0J6 as seed ortholog is 100%.

Group of orthologs #323. Best score 626 bits
Score difference with first non-orthologous sequence - C.neoformans:626 T.rubrum:626

Q5KI46              	100.00%		F2SP39              	100.00%
                    	       		F2T185              	10.78%
Bootstrap support for Q5KI46 as seed ortholog is 100%.
Bootstrap support for F2SP39 as seed ortholog is 100%.

Group of orthologs #324. Best score 626 bits
Score difference with first non-orthologous sequence - C.neoformans:626 T.rubrum:626

Q5KDE7              	100.00%		F2SGJ5              	100.00%
Bootstrap support for Q5KDE7 as seed ortholog is 100%.
Bootstrap support for F2SGJ5 as seed ortholog is 100%.

Group of orthologs #325. Best score 626 bits
Score difference with first non-orthologous sequence - C.neoformans:626 T.rubrum:626

Q5KDW0              	100.00%		F2SMS0              	100.00%
Bootstrap support for Q5KDW0 as seed ortholog is 100%.
Bootstrap support for F2SMS0 as seed ortholog is 100%.

Group of orthologs #326. Best score 626 bits
Score difference with first non-orthologous sequence - C.neoformans:626 T.rubrum:626

Q5KDP3              	100.00%		F2SP47              	100.00%
Bootstrap support for Q5KDP3 as seed ortholog is 100%.
Bootstrap support for F2SP47 as seed ortholog is 100%.

Group of orthologs #327. Best score 625 bits
Score difference with first non-orthologous sequence - C.neoformans:455 T.rubrum:458

P0CQ80              	100.00%		F2SIP6              	100.00%
Bootstrap support for P0CQ80 as seed ortholog is 100%.
Bootstrap support for F2SIP6 as seed ortholog is 100%.

Group of orthologs #328. Best score 624 bits
Score difference with first non-orthologous sequence - C.neoformans:624 T.rubrum:624

Q5KB69              	100.00%		F2SDC0              	100.00%
Bootstrap support for Q5KB69 as seed ortholog is 100%.
Bootstrap support for F2SDC0 as seed ortholog is 100%.

Group of orthologs #329. Best score 621 bits
Score difference with first non-orthologous sequence - C.neoformans:563 T.rubrum:621

Q5KP06              	100.00%		F2SVR5              	100.00%
Bootstrap support for Q5KP06 as seed ortholog is 100%.
Bootstrap support for F2SVR5 as seed ortholog is 100%.

Group of orthologs #330. Best score 620 bits
Score difference with first non-orthologous sequence - C.neoformans:620 T.rubrum:620

Q5KCI3              	100.00%		F2SY55              	100.00%
Bootstrap support for Q5KCI3 as seed ortholog is 100%.
Bootstrap support for F2SY55 as seed ortholog is 100%.

Group of orthologs #331. Best score 620 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubrum:620

Q5KF65              	100.00%		F2SWA6              	100.00%
Bootstrap support for Q5KF65 as seed ortholog is 99%.
Bootstrap support for F2SWA6 as seed ortholog is 100%.

Group of orthologs #332. Best score 620 bits
Score difference with first non-orthologous sequence - C.neoformans:620 T.rubrum:620

Q5KME1              	100.00%		F2STF5              	100.00%
Bootstrap support for Q5KME1 as seed ortholog is 100%.
Bootstrap support for F2STF5 as seed ortholog is 100%.

Group of orthologs #333. Best score 619 bits
Score difference with first non-orthologous sequence - C.neoformans:619 T.rubrum:619

P0CQ46              	100.00%		F2SRI7              	100.00%
Bootstrap support for P0CQ46 as seed ortholog is 100%.
Bootstrap support for F2SRI7 as seed ortholog is 100%.

Group of orthologs #334. Best score 618 bits
Score difference with first non-orthologous sequence - C.neoformans:618 T.rubrum:618

Q5K749              	100.00%		F2SY91              	100.00%
Bootstrap support for Q5K749 as seed ortholog is 100%.
Bootstrap support for F2SY91 as seed ortholog is 100%.

Group of orthologs #335. Best score 617 bits
Score difference with first non-orthologous sequence - C.neoformans:617 T.rubrum:617

Q5KJI4              	100.00%		F2SIC1              	100.00%
Bootstrap support for Q5KJI4 as seed ortholog is 100%.
Bootstrap support for F2SIC1 as seed ortholog is 100%.

Group of orthologs #336. Best score 616 bits
Score difference with first non-orthologous sequence - C.neoformans:616 T.rubrum:616

Q5K7C3              	100.00%		F2SDR9              	100.00%
Bootstrap support for Q5K7C3 as seed ortholog is 100%.
Bootstrap support for F2SDR9 as seed ortholog is 100%.

Group of orthologs #337. Best score 615 bits
Score difference with first non-orthologous sequence - C.neoformans:70 T.rubrum:476

Q5KLJ3              	100.00%		F2SF80              	100.00%
                    	       		F2T0A5              	20.85%
Bootstrap support for Q5KLJ3 as seed ortholog is 93%.
Bootstrap support for F2SF80 as seed ortholog is 100%.

Group of orthologs #338. Best score 615 bits
Score difference with first non-orthologous sequence - C.neoformans:377 T.rubrum:615

Q5KLG6              	100.00%		F2SRQ1              	100.00%
Bootstrap support for Q5KLG6 as seed ortholog is 100%.
Bootstrap support for F2SRQ1 as seed ortholog is 100%.

Group of orthologs #339. Best score 614 bits
Score difference with first non-orthologous sequence - C.neoformans:614 T.rubrum:614

Q5KLD7              	100.00%		F2SGL1              	100.00%
Bootstrap support for Q5KLD7 as seed ortholog is 100%.
Bootstrap support for F2SGL1 as seed ortholog is 100%.

Group of orthologs #340. Best score 614 bits
Score difference with first non-orthologous sequence - C.neoformans:614 T.rubrum:614

Q5KJC6              	100.00%		F2SV78              	100.00%
Bootstrap support for Q5KJC6 as seed ortholog is 100%.
Bootstrap support for F2SV78 as seed ortholog is 100%.

Group of orthologs #341. Best score 613 bits
Score difference with first non-orthologous sequence - C.neoformans:308 T.rubrum:331

Q5K8N9              	100.00%		F2SYL5              	100.00%
Bootstrap support for Q5K8N9 as seed ortholog is 100%.
Bootstrap support for F2SYL5 as seed ortholog is 100%.

Group of orthologs #342. Best score 613 bits
Score difference with first non-orthologous sequence - C.neoformans:205 T.rubrum:323

Q5KNC4              	100.00%		F2SLA4              	100.00%
Bootstrap support for Q5KNC4 as seed ortholog is 99%.
Bootstrap support for F2SLA4 as seed ortholog is 100%.

Group of orthologs #343. Best score 613 bits
Score difference with first non-orthologous sequence - C.neoformans:613 T.rubrum:613

Q5KLU5              	100.00%		F2SMN7              	100.00%
Bootstrap support for Q5KLU5 as seed ortholog is 100%.
Bootstrap support for F2SMN7 as seed ortholog is 100%.

Group of orthologs #344. Best score 613 bits
Score difference with first non-orthologous sequence - C.neoformans:422 T.rubrum:116

Q5KMN9              	100.00%		F2SST6              	100.00%
Bootstrap support for Q5KMN9 as seed ortholog is 100%.
Bootstrap support for F2SST6 as seed ortholog is 98%.

Group of orthologs #345. Best score 612 bits
Score difference with first non-orthologous sequence - C.neoformans:367 T.rubrum:612

Q5KKM5              	100.00%		F2SBM1              	100.00%
                    	       		F2SFZ2              	5.72%
Bootstrap support for Q5KKM5 as seed ortholog is 100%.
Bootstrap support for F2SBM1 as seed ortholog is 100%.

Group of orthologs #346. Best score 610 bits
Score difference with first non-orthologous sequence - C.neoformans:610 T.rubrum:610

Q5K9C7              	100.00%		F2SLQ9              	100.00%
Bootstrap support for Q5K9C7 as seed ortholog is 100%.
Bootstrap support for F2SLQ9 as seed ortholog is 100%.

Group of orthologs #347. Best score 609 bits
Score difference with first non-orthologous sequence - C.neoformans:188 T.rubrum:88

Q5K917              	100.00%		F2SK96              	100.00%
Bootstrap support for Q5K917 as seed ortholog is 99%.
Bootstrap support for F2SK96 as seed ortholog is 98%.

Group of orthologs #348. Best score 608 bits
Score difference with first non-orthologous sequence - C.neoformans:608 T.rubrum:608

Q5KKK6              	100.00%		F2SUW5              	100.00%
Bootstrap support for Q5KKK6 as seed ortholog is 100%.
Bootstrap support for F2SUW5 as seed ortholog is 100%.

Group of orthologs #349. Best score 606 bits
Score difference with first non-orthologous sequence - C.neoformans:606 T.rubrum:606

P0CR28              	100.00%		F2SQ22              	100.00%
Bootstrap support for P0CR28 as seed ortholog is 100%.
Bootstrap support for F2SQ22 as seed ortholog is 100%.

Group of orthologs #350. Best score 605 bits
Score difference with first non-orthologous sequence - C.neoformans:605 T.rubrum:605

Q5KFJ7              	100.00%		F2SL35              	100.00%
Bootstrap support for Q5KFJ7 as seed ortholog is 100%.
Bootstrap support for F2SL35 as seed ortholog is 100%.

Group of orthologs #351. Best score 604 bits
Score difference with first non-orthologous sequence - C.neoformans:604 T.rubrum:604

Q5KKA5              	100.00%		F2SWF4              	100.00%
Bootstrap support for Q5KKA5 as seed ortholog is 100%.
Bootstrap support for F2SWF4 as seed ortholog is 100%.

Group of orthologs #352. Best score 603 bits
Score difference with first non-orthologous sequence - C.neoformans:603 T.rubrum:603

Q5KMS7              	100.00%		F2SDP2              	100.00%
Bootstrap support for Q5KMS7 as seed ortholog is 100%.
Bootstrap support for F2SDP2 as seed ortholog is 100%.

Group of orthologs #353. Best score 603 bits
Score difference with first non-orthologous sequence - C.neoformans:525 T.rubrum:603

P0CM60              	100.00%		F2T100              	100.00%
Bootstrap support for P0CM60 as seed ortholog is 100%.
Bootstrap support for F2T100 as seed ortholog is 100%.

Group of orthologs #354. Best score 602 bits
Score difference with first non-orthologous sequence - C.neoformans:401 T.rubrum:404

Q5KN31              	100.00%		F2SJG7              	100.00%
Bootstrap support for Q5KN31 as seed ortholog is 100%.
Bootstrap support for F2SJG7 as seed ortholog is 100%.

Group of orthologs #355. Best score 601 bits
Score difference with first non-orthologous sequence - C.neoformans:601 T.rubrum:601

Q5KF77              	100.00%		F2SFZ8              	100.00%
Bootstrap support for Q5KF77 as seed ortholog is 100%.
Bootstrap support for F2SFZ8 as seed ortholog is 100%.

Group of orthologs #356. Best score 601 bits
Score difference with first non-orthologous sequence - C.neoformans:493 T.rubrum:601

Q5KB90              	100.00%		F2SJJ4              	100.00%
Bootstrap support for Q5KB90 as seed ortholog is 100%.
Bootstrap support for F2SJJ4 as seed ortholog is 100%.

Group of orthologs #357. Best score 601 bits
Score difference with first non-orthologous sequence - C.neoformans:601 T.rubrum:601

Q5KK90              	100.00%		F2SBK0              	100.00%
Bootstrap support for Q5KK90 as seed ortholog is 100%.
Bootstrap support for F2SBK0 as seed ortholog is 100%.

Group of orthologs #358. Best score 601 bits
Score difference with first non-orthologous sequence - C.neoformans:601 T.rubrum:601

Q5KL04              	100.00%		F2SPP6              	100.00%
Bootstrap support for Q5KL04 as seed ortholog is 100%.
Bootstrap support for F2SPP6 as seed ortholog is 100%.

Group of orthologs #359. Best score 601 bits
Score difference with first non-orthologous sequence - C.neoformans:601 T.rubrum:601

Q5KIZ5              	100.00%		F2SX31              	100.00%
Bootstrap support for Q5KIZ5 as seed ortholog is 100%.
Bootstrap support for F2SX31 as seed ortholog is 100%.

Group of orthologs #360. Best score 600 bits
Score difference with first non-orthologous sequence - C.neoformans:425 T.rubrum:444

P0CQ70              	100.00%		F2T0N9              	100.00%
Bootstrap support for P0CQ70 as seed ortholog is 100%.
Bootstrap support for F2T0N9 as seed ortholog is 100%.

Group of orthologs #361. Best score 599 bits
Score difference with first non-orthologous sequence - C.neoformans:599 T.rubrum:599

Q5K9Y3              	100.00%		F2SEC4              	100.00%
Bootstrap support for Q5K9Y3 as seed ortholog is 100%.
Bootstrap support for F2SEC4 as seed ortholog is 100%.

Group of orthologs #362. Best score 599 bits
Score difference with first non-orthologous sequence - C.neoformans:599 T.rubrum:599

P0CR26              	100.00%		F2SX80              	100.00%
Bootstrap support for P0CR26 as seed ortholog is 100%.
Bootstrap support for F2SX80 as seed ortholog is 100%.

Group of orthologs #363. Best score 599 bits
Score difference with first non-orthologous sequence - C.neoformans:599 T.rubrum:599

Q5KLT9              	100.00%		F2SUC7              	100.00%
Bootstrap support for Q5KLT9 as seed ortholog is 100%.
Bootstrap support for F2SUC7 as seed ortholog is 100%.

Group of orthologs #364. Best score 598 bits
Score difference with first non-orthologous sequence - C.neoformans:598 T.rubrum:598

Q5KCL7              	100.00%		F2SWX4              	100.00%
Bootstrap support for Q5KCL7 as seed ortholog is 100%.
Bootstrap support for F2SWX4 as seed ortholog is 100%.

Group of orthologs #365. Best score 598 bits
Score difference with first non-orthologous sequence - C.neoformans:598 T.rubrum:598

Q5KJN5              	100.00%		F2SSX5              	100.00%
Bootstrap support for Q5KJN5 as seed ortholog is 100%.
Bootstrap support for F2SSX5 as seed ortholog is 100%.

Group of orthologs #366. Best score 597 bits
Score difference with first non-orthologous sequence - C.neoformans:597 T.rubrum:597

Q5K9E3              	100.00%		F2SLR2              	100.00%
Bootstrap support for Q5K9E3 as seed ortholog is 100%.
Bootstrap support for F2SLR2 as seed ortholog is 100%.

Group of orthologs #367. Best score 597 bits
Score difference with first non-orthologous sequence - C.neoformans:597 T.rubrum:597

Q5KMS5              	100.00%		F2T0Z5              	100.00%
Bootstrap support for Q5KMS5 as seed ortholog is 100%.
Bootstrap support for F2T0Z5 as seed ortholog is 100%.

Group of orthologs #368. Best score 596 bits
Score difference with first non-orthologous sequence - C.neoformans:596 T.rubrum:596

Q5KQ29              	100.00%		F2SUF8              	100.00%
                    	       		F2SGZ4              	23.38%
Bootstrap support for Q5KQ29 as seed ortholog is 100%.
Bootstrap support for F2SUF8 as seed ortholog is 100%.

Group of orthologs #369. Best score 596 bits
Score difference with first non-orthologous sequence - C.neoformans:298 T.rubrum:373

Q5KKF1              	100.00%		F2STZ7              	100.00%
Bootstrap support for Q5KKF1 as seed ortholog is 100%.
Bootstrap support for F2STZ7 as seed ortholog is 100%.

Group of orthologs #370. Best score 596 bits
Score difference with first non-orthologous sequence - C.neoformans:596 T.rubrum:596

Q5KNJ1              	100.00%		F2STH9              	100.00%
Bootstrap support for Q5KNJ1 as seed ortholog is 100%.
Bootstrap support for F2STH9 as seed ortholog is 100%.

Group of orthologs #371. Best score 592 bits
Score difference with first non-orthologous sequence - C.neoformans:592 T.rubrum:592

Q5KGH6              	100.00%		F2SQA6              	100.00%
Bootstrap support for Q5KGH6 as seed ortholog is 100%.
Bootstrap support for F2SQA6 as seed ortholog is 100%.

Group of orthologs #372. Best score 591 bits
Score difference with first non-orthologous sequence - C.neoformans:20 T.rubrum:591

Q5K967              	100.00%		F2SG67              	100.00%
Bootstrap support for Q5K967 as seed ortholog is 63%.
Alternative seed ortholog is Q5KL54 (20 bits away from this cluster)
Bootstrap support for F2SG67 as seed ortholog is 100%.

Group of orthologs #373. Best score 591 bits
Score difference with first non-orthologous sequence - C.neoformans:591 T.rubrum:591

Q5KIW8              	100.00%		F2SGV0              	100.00%
Bootstrap support for Q5KIW8 as seed ortholog is 100%.
Bootstrap support for F2SGV0 as seed ortholog is 100%.

Group of orthologs #374. Best score 590 bits
Score difference with first non-orthologous sequence - C.neoformans:590 T.rubrum:275

Q5K960              	100.00%		F2SP65              	100.00%
Bootstrap support for Q5K960 as seed ortholog is 100%.
Bootstrap support for F2SP65 as seed ortholog is 100%.

Group of orthologs #375. Best score 589 bits
Score difference with first non-orthologous sequence - C.neoformans:589 T.rubrum:589

P0CN46              	100.00%		F2SJJ5              	100.00%
Bootstrap support for P0CN46 as seed ortholog is 100%.
Bootstrap support for F2SJJ5 as seed ortholog is 100%.

Group of orthologs #376. Best score 589 bits
Score difference with first non-orthologous sequence - C.neoformans:589 T.rubrum:589

Q5K972              	100.00%		F2SII8              	100.00%
Bootstrap support for Q5K972 as seed ortholog is 100%.
Bootstrap support for F2SII8 as seed ortholog is 100%.

Group of orthologs #377. Best score 589 bits
Score difference with first non-orthologous sequence - C.neoformans:589 T.rubrum:589

Q5KJC4              	100.00%		F2SGC8              	100.00%
Bootstrap support for Q5KJC4 as seed ortholog is 100%.
Bootstrap support for F2SGC8 as seed ortholog is 100%.

Group of orthologs #378. Best score 588 bits
Score difference with first non-orthologous sequence - C.neoformans:417 T.rubrum:424

P0CQ96              	100.00%		F2SBS4              	100.00%
Bootstrap support for P0CQ96 as seed ortholog is 100%.
Bootstrap support for F2SBS4 as seed ortholog is 100%.

Group of orthologs #379. Best score 588 bits
Score difference with first non-orthologous sequence - C.neoformans:378 T.rubrum:389

Q5KBN2              	100.00%		F2SY68              	100.00%
Bootstrap support for Q5KBN2 as seed ortholog is 100%.
Bootstrap support for F2SY68 as seed ortholog is 100%.

Group of orthologs #380. Best score 587 bits
Score difference with first non-orthologous sequence - C.neoformans:587 T.rubrum:587

Q5KB93              	100.00%		F2SPA3              	100.00%
Bootstrap support for Q5KB93 as seed ortholog is 100%.
Bootstrap support for F2SPA3 as seed ortholog is 100%.

Group of orthologs #381. Best score 586 bits
Score difference with first non-orthologous sequence - C.neoformans:586 T.rubrum:586

Q5KKU4              	100.00%		F2SMY2              	100.00%
Bootstrap support for Q5KKU4 as seed ortholog is 100%.
Bootstrap support for F2SMY2 as seed ortholog is 100%.

Group of orthologs #382. Best score 583 bits
Score difference with first non-orthologous sequence - C.neoformans:583 T.rubrum:583

Q5KIZ9              	100.00%		F2SZX3              	100.00%
Bootstrap support for Q5KIZ9 as seed ortholog is 100%.
Bootstrap support for F2SZX3 as seed ortholog is 100%.

Group of orthologs #383. Best score 582 bits
Score difference with first non-orthologous sequence - C.neoformans:582 T.rubrum:582

P0CP46              	100.00%		F2SQN1              	100.00%
Bootstrap support for P0CP46 as seed ortholog is 100%.
Bootstrap support for F2SQN1 as seed ortholog is 100%.

Group of orthologs #384. Best score 582 bits
Score difference with first non-orthologous sequence - C.neoformans:582 T.rubrum:582

Q5K757              	100.00%		F2T0C5              	100.00%
Bootstrap support for Q5K757 as seed ortholog is 100%.
Bootstrap support for F2T0C5 as seed ortholog is 100%.

Group of orthologs #385. Best score 582 bits
Score difference with first non-orthologous sequence - C.neoformans:582 T.rubrum:582

Q5KH27              	100.00%		F2SRU1              	100.00%
Bootstrap support for Q5KH27 as seed ortholog is 100%.
Bootstrap support for F2SRU1 as seed ortholog is 100%.

Group of orthologs #386. Best score 582 bits
Score difference with first non-orthologous sequence - C.neoformans:214 T.rubrum:582

Q5K9A0              	100.00%		F2SZ00              	100.00%
Bootstrap support for Q5K9A0 as seed ortholog is 99%.
Bootstrap support for F2SZ00 as seed ortholog is 100%.

Group of orthologs #387. Best score 582 bits
Score difference with first non-orthologous sequence - C.neoformans:582 T.rubrum:582

Q5KKQ6              	100.00%		F2SQR8              	100.00%
Bootstrap support for Q5KKQ6 as seed ortholog is 100%.
Bootstrap support for F2SQR8 as seed ortholog is 100%.

Group of orthologs #388. Best score 581 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubrum:230

Q5KL95              	100.00%		F2T0J9              	100.00%
Q5KL96              	68.29%		
Bootstrap support for Q5KL95 as seed ortholog is 99%.
Bootstrap support for F2T0J9 as seed ortholog is 100%.

Group of orthologs #389. Best score 580 bits
Score difference with first non-orthologous sequence - C.neoformans:580 T.rubrum:580

Q5KA27              	100.00%		F2SH24              	100.00%
Bootstrap support for Q5KA27 as seed ortholog is 100%.
Bootstrap support for F2SH24 as seed ortholog is 100%.

Group of orthologs #390. Best score 580 bits
Score difference with first non-orthologous sequence - C.neoformans:580 T.rubrum:580

Q5KL32              	100.00%		F2SNS1              	100.00%
Bootstrap support for Q5KL32 as seed ortholog is 100%.
Bootstrap support for F2SNS1 as seed ortholog is 100%.

Group of orthologs #391. Best score 580 bits
Score difference with first non-orthologous sequence - C.neoformans:580 T.rubrum:580

Q5KHB5              	100.00%		F2SY69              	100.00%
Bootstrap support for Q5KHB5 as seed ortholog is 100%.
Bootstrap support for F2SY69 as seed ortholog is 100%.

Group of orthologs #392. Best score 579 bits
Score difference with first non-orthologous sequence - C.neoformans:579 T.rubrum:579

Q5K7Q2              	100.00%		F2SCH5              	100.00%
Bootstrap support for Q5K7Q2 as seed ortholog is 100%.
Bootstrap support for F2SCH5 as seed ortholog is 100%.

Group of orthologs #393. Best score 579 bits
Score difference with first non-orthologous sequence - C.neoformans:579 T.rubrum:579

Q5K8D2              	100.00%		F2SMA3              	100.00%
Bootstrap support for Q5K8D2 as seed ortholog is 100%.
Bootstrap support for F2SMA3 as seed ortholog is 100%.

Group of orthologs #394. Best score 579 bits
Score difference with first non-orthologous sequence - C.neoformans:579 T.rubrum:579

Q5KJR9              	100.00%		F2SND5              	100.00%
Bootstrap support for Q5KJR9 as seed ortholog is 100%.
Bootstrap support for F2SND5 as seed ortholog is 100%.

Group of orthologs #395. Best score 579 bits
Score difference with first non-orthologous sequence - C.neoformans:579 T.rubrum:579

Q5KAP2              	100.00%		F2T172              	100.00%
Bootstrap support for Q5KAP2 as seed ortholog is 100%.
Bootstrap support for F2T172 as seed ortholog is 100%.

Group of orthologs #396. Best score 578 bits
Score difference with first non-orthologous sequence - C.neoformans:578 T.rubrum:578

Q5KHR6              	100.00%		F2SC76              	100.00%
Bootstrap support for Q5KHR6 as seed ortholog is 100%.
Bootstrap support for F2SC76 as seed ortholog is 100%.

Group of orthologs #397. Best score 578 bits
Score difference with first non-orthologous sequence - C.neoformans:578 T.rubrum:578

Q5KGH1              	100.00%		F2SYS3              	100.00%
Bootstrap support for Q5KGH1 as seed ortholog is 100%.
Bootstrap support for F2SYS3 as seed ortholog is 100%.

Group of orthologs #398. Best score 577 bits
Score difference with first non-orthologous sequence - C.neoformans:577 T.rubrum:228

Q5KH88              	100.00%		F2SCQ3              	100.00%
Bootstrap support for Q5KH88 as seed ortholog is 100%.
Bootstrap support for F2SCQ3 as seed ortholog is 99%.

Group of orthologs #399. Best score 576 bits
Score difference with first non-orthologous sequence - C.neoformans:382 T.rubrum:401

Q5KHE0              	100.00%		F2SCQ0              	100.00%
Bootstrap support for Q5KHE0 as seed ortholog is 100%.
Bootstrap support for F2SCQ0 as seed ortholog is 100%.

Group of orthologs #400. Best score 576 bits
Score difference with first non-orthologous sequence - C.neoformans:576 T.rubrum:444

Q5KI17              	100.00%		F2SGU1              	100.00%
Bootstrap support for Q5KI17 as seed ortholog is 100%.
Bootstrap support for F2SGU1 as seed ortholog is 100%.

Group of orthologs #401. Best score 576 bits
Score difference with first non-orthologous sequence - C.neoformans:576 T.rubrum:576

Q5K926              	100.00%		F2SQZ7              	100.00%
Bootstrap support for Q5K926 as seed ortholog is 100%.
Bootstrap support for F2SQZ7 as seed ortholog is 100%.

Group of orthologs #402. Best score 575 bits
Score difference with first non-orthologous sequence - C.neoformans:575 T.rubrum:575

P0CR86              	100.00%		F2SFF9              	100.00%
Bootstrap support for P0CR86 as seed ortholog is 100%.
Bootstrap support for F2SFF9 as seed ortholog is 100%.

Group of orthologs #403. Best score 574 bits
Score difference with first non-orthologous sequence - C.neoformans:574 T.rubrum:574

Q5KQ22              	100.00%		F2SWT9              	100.00%
Bootstrap support for Q5KQ22 as seed ortholog is 100%.
Bootstrap support for F2SWT9 as seed ortholog is 100%.

Group of orthologs #404. Best score 573 bits
Score difference with first non-orthologous sequence - C.neoformans:573 T.rubrum:357

Q5KN57              	100.00%		F2SRF5              	100.00%
Bootstrap support for Q5KN57 as seed ortholog is 100%.
Bootstrap support for F2SRF5 as seed ortholog is 100%.

Group of orthologs #405. Best score 572 bits
Score difference with first non-orthologous sequence - C.neoformans:572 T.rubrum:572

Q5KG72              	100.00%		F2SRE0              	100.00%
Bootstrap support for Q5KG72 as seed ortholog is 100%.
Bootstrap support for F2SRE0 as seed ortholog is 100%.

Group of orthologs #406. Best score 572 bits
Score difference with first non-orthologous sequence - C.neoformans:572 T.rubrum:572

Q5KGH3              	100.00%		F2T0I6              	100.00%
Bootstrap support for Q5KGH3 as seed ortholog is 100%.
Bootstrap support for F2T0I6 as seed ortholog is 100%.

Group of orthologs #407. Best score 571 bits
Score difference with first non-orthologous sequence - C.neoformans:571 T.rubrum:571

Q5K9L7              	100.00%		F2SN62              	100.00%
Q5KMG8              	17.71%		
Bootstrap support for Q5K9L7 as seed ortholog is 100%.
Bootstrap support for F2SN62 as seed ortholog is 100%.

Group of orthologs #408. Best score 571 bits
Score difference with first non-orthologous sequence - C.neoformans:515 T.rubrum:571

Q5KPW4              	100.00%		F2SDA8              	100.00%
Bootstrap support for Q5KPW4 as seed ortholog is 100%.
Bootstrap support for F2SDA8 as seed ortholog is 100%.

Group of orthologs #409. Best score 571 bits
Score difference with first non-orthologous sequence - C.neoformans:517 T.rubrum:571

Q5KHV9              	100.00%		F2SR98              	100.00%
Bootstrap support for Q5KHV9 as seed ortholog is 100%.
Bootstrap support for F2SR98 as seed ortholog is 100%.

Group of orthologs #410. Best score 570 bits
Score difference with first non-orthologous sequence - C.neoformans:570 T.rubrum:570

Q5KLV5              	100.00%		F2SVY1              	100.00%
Bootstrap support for Q5KLV5 as seed ortholog is 100%.
Bootstrap support for F2SVY1 as seed ortholog is 100%.

Group of orthologs #411. Best score 569 bits
Score difference with first non-orthologous sequence - C.neoformans:339 T.rubrum:390

Q5KI40              	100.00%		F2SEN0              	100.00%
Bootstrap support for Q5KI40 as seed ortholog is 100%.
Bootstrap support for F2SEN0 as seed ortholog is 100%.

Group of orthologs #412. Best score 569 bits
Score difference with first non-orthologous sequence - C.neoformans:358 T.rubrum:399

P0CQ92              	100.00%		F2SWX5              	100.00%
Bootstrap support for P0CQ92 as seed ortholog is 100%.
Bootstrap support for F2SWX5 as seed ortholog is 100%.

Group of orthologs #413. Best score 569 bits
Score difference with first non-orthologous sequence - C.neoformans:569 T.rubrum:569

Q5KC69              	100.00%		F2SYZ3              	100.00%
Bootstrap support for Q5KC69 as seed ortholog is 100%.
Bootstrap support for F2SYZ3 as seed ortholog is 100%.

Group of orthologs #414. Best score 567 bits
Score difference with first non-orthologous sequence - C.neoformans:274 T.rubrum:290

Q5K9A2              	100.00%		F2SCA4              	100.00%
Q5KC83              	77.48%		
Bootstrap support for Q5K9A2 as seed ortholog is 100%.
Bootstrap support for F2SCA4 as seed ortholog is 100%.

Group of orthologs #415. Best score 567 bits
Score difference with first non-orthologous sequence - C.neoformans:567 T.rubrum:567

Q5KH73              	100.00%		F2SZU3              	100.00%
Bootstrap support for Q5KH73 as seed ortholog is 100%.
Bootstrap support for F2SZU3 as seed ortholog is 100%.

Group of orthologs #416. Best score 566 bits
Score difference with first non-orthologous sequence - C.neoformans:566 T.rubrum:566

Q5KE01              	100.00%		F2SRN7              	100.00%
Bootstrap support for Q5KE01 as seed ortholog is 100%.
Bootstrap support for F2SRN7 as seed ortholog is 100%.

Group of orthologs #417. Best score 566 bits
Score difference with first non-orthologous sequence - C.neoformans:566 T.rubrum:566

Q5KBP8              	100.00%		F2SZC6              	100.00%
Bootstrap support for Q5KBP8 as seed ortholog is 100%.
Bootstrap support for F2SZC6 as seed ortholog is 100%.

Group of orthologs #418. Best score 565 bits
Score difference with first non-orthologous sequence - C.neoformans:565 T.rubrum:565

Q5KHN4              	100.00%		F2SNP0              	100.00%
Bootstrap support for Q5KHN4 as seed ortholog is 100%.
Bootstrap support for F2SNP0 as seed ortholog is 100%.

Group of orthologs #419. Best score 565 bits
Score difference with first non-orthologous sequence - C.neoformans:407 T.rubrum:438

Q5KH38              	100.00%		F2SQV4              	100.00%
Bootstrap support for Q5KH38 as seed ortholog is 100%.
Bootstrap support for F2SQV4 as seed ortholog is 100%.

Group of orthologs #420. Best score 565 bits
Score difference with first non-orthologous sequence - C.neoformans:565 T.rubrum:565

P0CP60              	100.00%		F2T0W3              	100.00%
Bootstrap support for P0CP60 as seed ortholog is 100%.
Bootstrap support for F2T0W3 as seed ortholog is 100%.

Group of orthologs #421. Best score 564 bits
Score difference with first non-orthologous sequence - C.neoformans:564 T.rubrum:564

Q5KLK8              	100.00%		F2SW46              	100.00%
                    	       		F2SNI7              	7.10%
Bootstrap support for Q5KLK8 as seed ortholog is 100%.
Bootstrap support for F2SW46 as seed ortholog is 100%.

Group of orthologs #422. Best score 564 bits
Score difference with first non-orthologous sequence - C.neoformans:48 T.rubrum:76

Q5KEX3              	100.00%		F2SCC2              	100.00%
Bootstrap support for Q5KEX3 as seed ortholog is 86%.
Bootstrap support for F2SCC2 as seed ortholog is 97%.

Group of orthologs #423. Best score 564 bits
Score difference with first non-orthologous sequence - C.neoformans:564 T.rubrum:374

Q5KEE8              	100.00%		F2SQX6              	100.00%
Bootstrap support for Q5KEE8 as seed ortholog is 100%.
Bootstrap support for F2SQX6 as seed ortholog is 100%.

Group of orthologs #424. Best score 564 bits
Score difference with first non-orthologous sequence - C.neoformans:564 T.rubrum:564

Q5KED7              	100.00%		F2SWR7              	100.00%
Bootstrap support for Q5KED7 as seed ortholog is 100%.
Bootstrap support for F2SWR7 as seed ortholog is 100%.

Group of orthologs #425. Best score 562 bits
Score difference with first non-orthologous sequence - C.neoformans:562 T.rubrum:562

Q5KFV6              	100.00%		F2SMA0              	100.00%
Bootstrap support for Q5KFV6 as seed ortholog is 100%.
Bootstrap support for F2SMA0 as seed ortholog is 100%.

Group of orthologs #426. Best score 560 bits
Score difference with first non-orthologous sequence - C.neoformans:560 T.rubrum:396

P0CQ66              	100.00%		F2SSE1              	100.00%
Bootstrap support for P0CQ66 as seed ortholog is 100%.
Bootstrap support for F2SSE1 as seed ortholog is 100%.

Group of orthologs #427. Best score 560 bits
Score difference with first non-orthologous sequence - C.neoformans:560 T.rubrum:560

Q5KF87              	100.00%		F2SYG2              	100.00%
Bootstrap support for Q5KF87 as seed ortholog is 100%.
Bootstrap support for F2SYG2 as seed ortholog is 100%.

Group of orthologs #428. Best score 560 bits
Score difference with first non-orthologous sequence - C.neoformans:39 T.rubrum:125

Q5KIV9              	100.00%		F2SWI9              	100.00%
Bootstrap support for Q5KIV9 as seed ortholog is 82%.
Bootstrap support for F2SWI9 as seed ortholog is 99%.

Group of orthologs #429. Best score 559 bits
Score difference with first non-orthologous sequence - C.neoformans:559 T.rubrum:559

Q5KAU9              	100.00%		F2SEP2              	100.00%
                    	       		F2SZF7              	7.29%
Bootstrap support for Q5KAU9 as seed ortholog is 100%.
Bootstrap support for F2SEP2 as seed ortholog is 100%.

Group of orthologs #430. Best score 559 bits
Score difference with first non-orthologous sequence - C.neoformans:559 T.rubrum:559

Q5K995              	100.00%		F2SZG4              	100.00%
Bootstrap support for Q5K995 as seed ortholog is 100%.
Bootstrap support for F2SZG4 as seed ortholog is 100%.

Group of orthologs #431. Best score 558 bits
Score difference with first non-orthologous sequence - C.neoformans:558 T.rubrum:558

P0CR70              	100.00%		F2SSM9              	100.00%
Bootstrap support for P0CR70 as seed ortholog is 100%.
Bootstrap support for F2SSM9 as seed ortholog is 100%.

Group of orthologs #432. Best score 558 bits
Score difference with first non-orthologous sequence - C.neoformans:558 T.rubrum:558

Q5KFA0              	100.00%		F2SMB3              	100.00%
Bootstrap support for Q5KFA0 as seed ortholog is 100%.
Bootstrap support for F2SMB3 as seed ortholog is 100%.

Group of orthologs #433. Best score 558 bits
Score difference with first non-orthologous sequence - C.neoformans:558 T.rubrum:558

Q5KJM5              	100.00%		F2SZ64              	100.00%
Bootstrap support for Q5KJM5 as seed ortholog is 100%.
Bootstrap support for F2SZ64 as seed ortholog is 100%.

Group of orthologs #434. Best score 557 bits
Score difference with first non-orthologous sequence - C.neoformans:472 T.rubrum:478

Q5K7P9              	100.00%		F2SID7              	100.00%
Bootstrap support for Q5K7P9 as seed ortholog is 100%.
Bootstrap support for F2SID7 as seed ortholog is 100%.

Group of orthologs #435. Best score 557 bits
Score difference with first non-orthologous sequence - C.neoformans:260 T.rubrum:557

Q5KCW8              	100.00%		F2SU66              	100.00%
Bootstrap support for Q5KCW8 as seed ortholog is 99%.
Bootstrap support for F2SU66 as seed ortholog is 100%.

Group of orthologs #436. Best score 557 bits
Score difference with first non-orthologous sequence - C.neoformans:557 T.rubrum:557

Q5KK33              	100.00%		F2SQE8              	100.00%
Bootstrap support for Q5KK33 as seed ortholog is 100%.
Bootstrap support for F2SQE8 as seed ortholog is 100%.

Group of orthologs #437. Best score 557 bits
Score difference with first non-orthologous sequence - C.neoformans:557 T.rubrum:557

Q5KJS8              	100.00%		F2T171              	100.00%
Bootstrap support for Q5KJS8 as seed ortholog is 100%.
Bootstrap support for F2T171 as seed ortholog is 100%.

Group of orthologs #438. Best score 554 bits
Score difference with first non-orthologous sequence - C.neoformans:554 T.rubrum:554

Q5KH01              	100.00%		F2SRV6              	100.00%
Bootstrap support for Q5KH01 as seed ortholog is 100%.
Bootstrap support for F2SRV6 as seed ortholog is 100%.

Group of orthologs #439. Best score 553 bits
Score difference with first non-orthologous sequence - C.neoformans:553 T.rubrum:553

Q5K7R3              	100.00%		F2SET8              	100.00%
Bootstrap support for Q5K7R3 as seed ortholog is 100%.
Bootstrap support for F2SET8 as seed ortholog is 100%.

Group of orthologs #440. Best score 553 bits
Score difference with first non-orthologous sequence - C.neoformans:338 T.rubrum:429

Q5KNT3              	100.00%		F2SYB8              	100.00%
Bootstrap support for Q5KNT3 as seed ortholog is 100%.
Bootstrap support for F2SYB8 as seed ortholog is 100%.

Group of orthologs #441. Best score 552 bits
Score difference with first non-orthologous sequence - C.neoformans:552 T.rubrum:552

P0CM44              	100.00%		F2SS65              	100.00%
Bootstrap support for P0CM44 as seed ortholog is 100%.
Bootstrap support for F2SS65 as seed ortholog is 100%.

Group of orthologs #442. Best score 552 bits
Score difference with first non-orthologous sequence - C.neoformans:552 T.rubrum:552

Q5KAJ1              	100.00%		F2SPK9              	100.00%
Bootstrap support for Q5KAJ1 as seed ortholog is 100%.
Bootstrap support for F2SPK9 as seed ortholog is 100%.

Group of orthologs #443. Best score 552 bits
Score difference with first non-orthologous sequence - C.neoformans:552 T.rubrum:552

Q5KKS9              	100.00%		F2SXH6              	100.00%
Bootstrap support for Q5KKS9 as seed ortholog is 100%.
Bootstrap support for F2SXH6 as seed ortholog is 100%.

Group of orthologs #444. Best score 551 bits
Score difference with first non-orthologous sequence - C.neoformans:551 T.rubrum:551

Q5KKT5              	100.00%		F2SMX9              	100.00%
Bootstrap support for Q5KKT5 as seed ortholog is 100%.
Bootstrap support for F2SMX9 as seed ortholog is 100%.

Group of orthologs #445. Best score 550 bits
Score difference with first non-orthologous sequence - C.neoformans:312 T.rubrum:494

Q5KKN2              	100.00%		F2SNK6              	100.00%
Bootstrap support for Q5KKN2 as seed ortholog is 100%.
Bootstrap support for F2SNK6 as seed ortholog is 100%.

Group of orthologs #446. Best score 549 bits
Score difference with first non-orthologous sequence - C.neoformans:549 T.rubrum:549

Q5KQ06              	100.00%		F2SWF0              	100.00%
Bootstrap support for Q5KQ06 as seed ortholog is 100%.
Bootstrap support for F2SWF0 as seed ortholog is 100%.

Group of orthologs #447. Best score 548 bits
Score difference with first non-orthologous sequence - C.neoformans:548 T.rubrum:548

Q5K9L0              	100.00%		F2SRW7              	100.00%
Bootstrap support for Q5K9L0 as seed ortholog is 100%.
Bootstrap support for F2SRW7 as seed ortholog is 100%.

Group of orthologs #448. Best score 548 bits
Score difference with first non-orthologous sequence - C.neoformans:119 T.rubrum:548

Q5KLA7              	100.00%		F2SH28              	100.00%
Bootstrap support for Q5KLA7 as seed ortholog is 99%.
Bootstrap support for F2SH28 as seed ortholog is 100%.

Group of orthologs #449. Best score 548 bits
Score difference with first non-orthologous sequence - C.neoformans:548 T.rubrum:548

Q5KP62              	100.00%		F2SRK7              	100.00%
Bootstrap support for Q5KP62 as seed ortholog is 100%.
Bootstrap support for F2SRK7 as seed ortholog is 100%.

Group of orthologs #450. Best score 548 bits
Score difference with first non-orthologous sequence - C.neoformans:413 T.rubrum:455

Q5KMF5              	100.00%		F2STC1              	100.00%
Bootstrap support for Q5KMF5 as seed ortholog is 100%.
Bootstrap support for F2STC1 as seed ortholog is 100%.

Group of orthologs #451. Best score 547 bits
Score difference with first non-orthologous sequence - C.neoformans:547 T.rubrum:547

Q5KHJ8              	100.00%		F2SGB6              	100.00%
Bootstrap support for Q5KHJ8 as seed ortholog is 100%.
Bootstrap support for F2SGB6 as seed ortholog is 100%.

Group of orthologs #452. Best score 547 bits
Score difference with first non-orthologous sequence - C.neoformans:547 T.rubrum:72

Q5KGF6              	100.00%		F2SKA8              	100.00%
Bootstrap support for Q5KGF6 as seed ortholog is 100%.
Bootstrap support for F2SKA8 as seed ortholog is 87%.

Group of orthologs #453. Best score 547 bits
Score difference with first non-orthologous sequence - C.neoformans:547 T.rubrum:547

Q5KBD9              	100.00%		F2SUB8              	100.00%
Bootstrap support for Q5KBD9 as seed ortholog is 100%.
Bootstrap support for F2SUB8 as seed ortholog is 100%.

Group of orthologs #454. Best score 547 bits
Score difference with first non-orthologous sequence - C.neoformans:547 T.rubrum:547

Q5KMA4              	100.00%		F2SN21              	100.00%
Bootstrap support for Q5KMA4 as seed ortholog is 100%.
Bootstrap support for F2SN21 as seed ortholog is 100%.

Group of orthologs #455. Best score 545 bits
Score difference with first non-orthologous sequence - C.neoformans:545 T.rubrum:545

P0CP52              	100.00%		F2STF2              	100.00%
Bootstrap support for P0CP52 as seed ortholog is 100%.
Bootstrap support for F2STF2 as seed ortholog is 100%.

Group of orthologs #456. Best score 545 bits
Score difference with first non-orthologous sequence - C.neoformans:545 T.rubrum:545

Q5KGG9              	100.00%		F2SKN4              	100.00%
Bootstrap support for Q5KGG9 as seed ortholog is 100%.
Bootstrap support for F2SKN4 as seed ortholog is 100%.

Group of orthologs #457. Best score 544 bits
Score difference with first non-orthologous sequence - C.neoformans:426 T.rubrum:463

Q5KF69              	100.00%		F2SIT4              	100.00%
Bootstrap support for Q5KF69 as seed ortholog is 100%.
Bootstrap support for F2SIT4 as seed ortholog is 100%.

Group of orthologs #458. Best score 544 bits
Score difference with first non-orthologous sequence - C.neoformans:544 T.rubrum:544

Q5KFR0              	100.00%		F2SLM2              	100.00%
Bootstrap support for Q5KFR0 as seed ortholog is 100%.
Bootstrap support for F2SLM2 as seed ortholog is 100%.

Group of orthologs #459. Best score 542 bits
Score difference with first non-orthologous sequence - C.neoformans:319 T.rubrum:366

P0CR00              	100.00%		F2SET1              	100.00%
Bootstrap support for P0CR00 as seed ortholog is 100%.
Bootstrap support for F2SET1 as seed ortholog is 100%.

Group of orthologs #460. Best score 542 bits
Score difference with first non-orthologous sequence - C.neoformans:542 T.rubrum:542

Q5KDR3              	100.00%		F2SSE0              	100.00%
Bootstrap support for Q5KDR3 as seed ortholog is 100%.
Bootstrap support for F2SSE0 as seed ortholog is 100%.

Group of orthologs #461. Best score 541 bits
Score difference with first non-orthologous sequence - C.neoformans:541 T.rubrum:541

Q5KC30              	100.00%		F2SEC2              	100.00%
Bootstrap support for Q5KC30 as seed ortholog is 100%.
Bootstrap support for F2SEC2 as seed ortholog is 100%.

Group of orthologs #462. Best score 541 bits
Score difference with first non-orthologous sequence - C.neoformans:541 T.rubrum:317

Q5KCX8              	100.00%		F2SFM1              	100.00%
Bootstrap support for Q5KCX8 as seed ortholog is 100%.
Bootstrap support for F2SFM1 as seed ortholog is 100%.

Group of orthologs #463. Best score 541 bits
Score difference with first non-orthologous sequence - C.neoformans:541 T.rubrum:541

Q5KI33              	100.00%		F2SPP8              	100.00%
Bootstrap support for Q5KI33 as seed ortholog is 100%.
Bootstrap support for F2SPP8 as seed ortholog is 100%.

Group of orthologs #464. Best score 541 bits
Score difference with first non-orthologous sequence - C.neoformans:541 T.rubrum:541

Q5KM85              	100.00%		F2SWC8              	100.00%
Bootstrap support for Q5KM85 as seed ortholog is 100%.
Bootstrap support for F2SWC8 as seed ortholog is 100%.

Group of orthologs #465. Best score 539 bits
Score difference with first non-orthologous sequence - C.neoformans:300 T.rubrum:454

Q5KFU8              	100.00%		F2SL28              	100.00%
Bootstrap support for Q5KFU8 as seed ortholog is 100%.
Bootstrap support for F2SL28 as seed ortholog is 100%.

Group of orthologs #466. Best score 539 bits
Score difference with first non-orthologous sequence - C.neoformans:539 T.rubrum:539

P0CN44              	100.00%		F2SVU1              	100.00%
Bootstrap support for P0CN44 as seed ortholog is 100%.
Bootstrap support for F2SVU1 as seed ortholog is 100%.

Group of orthologs #467. Best score 539 bits
Score difference with first non-orthologous sequence - C.neoformans:539 T.rubrum:539

Q5KPG7              	100.00%		F2SQ68              	100.00%
Bootstrap support for Q5KPG7 as seed ortholog is 100%.
Bootstrap support for F2SQ68 as seed ortholog is 100%.

Group of orthologs #468. Best score 539 bits
Score difference with first non-orthologous sequence - C.neoformans:389 T.rubrum:447

Q5KMR8              	100.00%		F2STV6              	100.00%
Bootstrap support for Q5KMR8 as seed ortholog is 100%.
Bootstrap support for F2STV6 as seed ortholog is 100%.

Group of orthologs #469. Best score 538 bits
Score difference with first non-orthologous sequence - C.neoformans:432 T.rubrum:538

Q5KCK2              	100.00%		F2SZS3              	100.00%
Bootstrap support for Q5KCK2 as seed ortholog is 100%.
Bootstrap support for F2SZS3 as seed ortholog is 100%.

Group of orthologs #470. Best score 537 bits
Score difference with first non-orthologous sequence - C.neoformans:537 T.rubrum:537

Q5KLC6              	100.00%		F2SHP8              	100.00%
Bootstrap support for Q5KLC6 as seed ortholog is 100%.
Bootstrap support for F2SHP8 as seed ortholog is 100%.

Group of orthologs #471. Best score 536 bits
Score difference with first non-orthologous sequence - C.neoformans:536 T.rubrum:536

Q5KFI1              	100.00%		F2SPU4              	100.00%
Bootstrap support for Q5KFI1 as seed ortholog is 100%.
Bootstrap support for F2SPU4 as seed ortholog is 100%.

Group of orthologs #472. Best score 534 bits
Score difference with first non-orthologous sequence - C.neoformans:398 T.rubrum:284

Q5KAN2              	100.00%		F2SV36              	100.00%
                    	       		F2SQ94              	39.82%
Bootstrap support for Q5KAN2 as seed ortholog is 100%.
Bootstrap support for F2SV36 as seed ortholog is 100%.

Group of orthologs #473. Best score 534 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubrum:534

Q5KC54              	100.00%		F2SKQ5              	100.00%
Bootstrap support for Q5KC54 as seed ortholog is 99%.
Bootstrap support for F2SKQ5 as seed ortholog is 100%.

Group of orthologs #474. Best score 534 bits
Score difference with first non-orthologous sequence - C.neoformans:414 T.rubrum:534

Q5KHQ8              	100.00%		F2SW62              	100.00%
Bootstrap support for Q5KHQ8 as seed ortholog is 100%.
Bootstrap support for F2SW62 as seed ortholog is 100%.

Group of orthologs #475. Best score 534 bits
Score difference with first non-orthologous sequence - C.neoformans:534 T.rubrum:534

Q5KNW8              	100.00%		F2SXA5              	100.00%
Bootstrap support for Q5KNW8 as seed ortholog is 100%.
Bootstrap support for F2SXA5 as seed ortholog is 100%.

Group of orthologs #476. Best score 532 bits
Score difference with first non-orthologous sequence - C.neoformans:532 T.rubrum:532

Q5KF19              	100.00%		F2SF13              	100.00%
Bootstrap support for Q5KF19 as seed ortholog is 100%.
Bootstrap support for F2SF13 as seed ortholog is 100%.

Group of orthologs #477. Best score 532 bits
Score difference with first non-orthologous sequence - C.neoformans:532 T.rubrum:532

Q5KH62              	100.00%		F2SET2              	100.00%
Bootstrap support for Q5KH62 as seed ortholog is 100%.
Bootstrap support for F2SET2 as seed ortholog is 100%.

Group of orthologs #478. Best score 532 bits
Score difference with first non-orthologous sequence - C.neoformans:532 T.rubrum:373

Q5KIY3              	100.00%		F2SI13              	100.00%
Bootstrap support for Q5KIY3 as seed ortholog is 100%.
Bootstrap support for F2SI13 as seed ortholog is 100%.

Group of orthologs #479. Best score 530 bits
Score difference with first non-orthologous sequence - C.neoformans:530 T.rubrum:530

Q5K8K0              	100.00%		F2SE39              	100.00%
Bootstrap support for Q5K8K0 as seed ortholog is 100%.
Bootstrap support for F2SE39 as seed ortholog is 100%.

Group of orthologs #480. Best score 530 bits
Score difference with first non-orthologous sequence - C.neoformans:530 T.rubrum:530

Q5KGI0              	100.00%		F2SHK5              	100.00%
Bootstrap support for Q5KGI0 as seed ortholog is 100%.
Bootstrap support for F2SHK5 as seed ortholog is 100%.

Group of orthologs #481. Best score 530 bits
Score difference with first non-orthologous sequence - C.neoformans:530 T.rubrum:530

Q5KDW8              	100.00%		F2SML2              	100.00%
Bootstrap support for Q5KDW8 as seed ortholog is 100%.
Bootstrap support for F2SML2 as seed ortholog is 100%.

Group of orthologs #482. Best score 530 bits
Score difference with first non-orthologous sequence - C.neoformans:530 T.rubrum:530

P0CM88              	100.00%		F2T054              	100.00%
Bootstrap support for P0CM88 as seed ortholog is 100%.
Bootstrap support for F2T054 as seed ortholog is 100%.

Group of orthologs #483. Best score 530 bits
Score difference with first non-orthologous sequence - C.neoformans:530 T.rubrum:530

Q5KIM8              	100.00%		F2SRT1              	100.00%
Bootstrap support for Q5KIM8 as seed ortholog is 100%.
Bootstrap support for F2SRT1 as seed ortholog is 100%.

Group of orthologs #484. Best score 530 bits
Score difference with first non-orthologous sequence - C.neoformans:385 T.rubrum:393

Q5KPY0              	100.00%		F2SWB7              	100.00%
Bootstrap support for Q5KPY0 as seed ortholog is 100%.
Bootstrap support for F2SWB7 as seed ortholog is 100%.

Group of orthologs #485. Best score 529 bits
Score difference with first non-orthologous sequence - C.neoformans:529 T.rubrum:529

Q5KFZ4              	100.00%		F2SFE9              	100.00%
                    	       		F2SG93              	31.95%
Bootstrap support for Q5KFZ4 as seed ortholog is 100%.
Bootstrap support for F2SFE9 as seed ortholog is 100%.

Group of orthologs #486. Best score 529 bits
Score difference with first non-orthologous sequence - C.neoformans:364 T.rubrum:400

Q5K8Q2              	100.00%		F2SQI2              	100.00%
Bootstrap support for Q5K8Q2 as seed ortholog is 100%.
Bootstrap support for F2SQI2 as seed ortholog is 100%.

Group of orthologs #487. Best score 529 bits
Score difference with first non-orthologous sequence - C.neoformans:529 T.rubrum:277

Q5KNP2              	100.00%		F2SFF4              	100.00%
Bootstrap support for Q5KNP2 as seed ortholog is 100%.
Bootstrap support for F2SFF4 as seed ortholog is 100%.

Group of orthologs #488. Best score 529 bits
Score difference with first non-orthologous sequence - C.neoformans:529 T.rubrum:529

Q5KGA7              	100.00%		F2SN71              	100.00%
Bootstrap support for Q5KGA7 as seed ortholog is 100%.
Bootstrap support for F2SN71 as seed ortholog is 100%.

Group of orthologs #489. Best score 529 bits
Score difference with first non-orthologous sequence - C.neoformans:529 T.rubrum:529

Q5KMQ2              	100.00%		F2T1A2              	100.00%
Bootstrap support for Q5KMQ2 as seed ortholog is 100%.
Bootstrap support for F2T1A2 as seed ortholog is 100%.

Group of orthologs #490. Best score 527 bits
Score difference with first non-orthologous sequence - C.neoformans:527 T.rubrum:94

Q5K8J5              	100.00%		F2SJG4              	100.00%
Bootstrap support for Q5K8J5 as seed ortholog is 100%.
Bootstrap support for F2SJG4 as seed ortholog is 97%.

Group of orthologs #491. Best score 526 bits
Score difference with first non-orthologous sequence - C.neoformans:263 T.rubrum:106

Q5K7X5              	100.00%		F2SX54              	100.00%
Q5K826              	24.15%		
Bootstrap support for Q5K7X5 as seed ortholog is 100%.
Bootstrap support for F2SX54 as seed ortholog is 99%.

Group of orthologs #492. Best score 526 bits
Score difference with first non-orthologous sequence - C.neoformans:526 T.rubrum:526

Q5KHG2              	100.00%		F2SI79              	100.00%
Bootstrap support for Q5KHG2 as seed ortholog is 100%.
Bootstrap support for F2SI79 as seed ortholog is 100%.

Group of orthologs #493. Best score 525 bits
Score difference with first non-orthologous sequence - C.neoformans:427 T.rubrum:448

Q5K7C2              	100.00%		F2SEU0              	100.00%
Bootstrap support for Q5K7C2 as seed ortholog is 100%.
Bootstrap support for F2SEU0 as seed ortholog is 100%.

Group of orthologs #494. Best score 525 bits
Score difference with first non-orthologous sequence - C.neoformans:525 T.rubrum:525

Q5KGK2              	100.00%		F2SE60              	100.00%
Bootstrap support for Q5KGK2 as seed ortholog is 100%.
Bootstrap support for F2SE60 as seed ortholog is 100%.

Group of orthologs #495. Best score 525 bits
Score difference with first non-orthologous sequence - C.neoformans:525 T.rubrum:525

Q5KBB6              	100.00%		F2SJ81              	100.00%
Bootstrap support for Q5KBB6 as seed ortholog is 100%.
Bootstrap support for F2SJ81 as seed ortholog is 100%.

Group of orthologs #496. Best score 525 bits
Score difference with first non-orthologous sequence - C.neoformans:525 T.rubrum:525

Q5KMH1              	100.00%		F2STN4              	100.00%
Bootstrap support for Q5KMH1 as seed ortholog is 100%.
Bootstrap support for F2STN4 as seed ortholog is 100%.

Group of orthologs #497. Best score 524 bits
Score difference with first non-orthologous sequence - C.neoformans:524 T.rubrum:307

Q5KE89              	100.00%		F2STS3              	100.00%
Bootstrap support for Q5KE89 as seed ortholog is 100%.
Bootstrap support for F2STS3 as seed ortholog is 100%.

Group of orthologs #498. Best score 522 bits
Score difference with first non-orthologous sequence - C.neoformans:522 T.rubrum:522

Q5KF16              	100.00%		F2SUP3              	100.00%
Bootstrap support for Q5KF16 as seed ortholog is 100%.
Bootstrap support for F2SUP3 as seed ortholog is 100%.

Group of orthologs #499. Best score 520 bits
Score difference with first non-orthologous sequence - C.neoformans:324 T.rubrum:311

Q5KLH7              	100.00%		F2SR90              	100.00%
Bootstrap support for Q5KLH7 as seed ortholog is 100%.
Bootstrap support for F2SR90 as seed ortholog is 100%.

Group of orthologs #500. Best score 520 bits
Score difference with first non-orthologous sequence - C.neoformans:341 T.rubrum:520

Q5KP10              	100.00%		F2SZ44              	100.00%
Bootstrap support for Q5KP10 as seed ortholog is 100%.
Bootstrap support for F2SZ44 as seed ortholog is 100%.

Group of orthologs #501. Best score 519 bits
Score difference with first non-orthologous sequence - C.neoformans:83 T.rubrum:519

Q5K9A9              	100.00%		F2SSC1              	100.00%
Bootstrap support for Q5K9A9 as seed ortholog is 99%.
Bootstrap support for F2SSC1 as seed ortholog is 100%.

Group of orthologs #502. Best score 519 bits
Score difference with first non-orthologous sequence - C.neoformans:519 T.rubrum:519

Q5K9I3              	100.00%		F2SSM4              	100.00%
Bootstrap support for Q5K9I3 as seed ortholog is 100%.
Bootstrap support for F2SSM4 as seed ortholog is 100%.

Group of orthologs #503. Best score 519 bits
Score difference with first non-orthologous sequence - C.neoformans:519 T.rubrum:405

Q5K9M8              	100.00%		F2SWJ5              	100.00%
Bootstrap support for Q5K9M8 as seed ortholog is 100%.
Bootstrap support for F2SWJ5 as seed ortholog is 100%.

Group of orthologs #504. Best score 517 bits
Score difference with first non-orthologous sequence - C.neoformans:517 T.rubrum:285

Q5KMG1              	100.00%		F2SVA7              	100.00%
Q5K8R8              	10.76%		
Bootstrap support for Q5KMG1 as seed ortholog is 100%.
Bootstrap support for F2SVA7 as seed ortholog is 100%.

Group of orthologs #505. Best score 517 bits
Score difference with first non-orthologous sequence - C.neoformans:517 T.rubrum:517

Q5KHL0              	100.00%		F2SGS2              	100.00%
Bootstrap support for Q5KHL0 as seed ortholog is 100%.
Bootstrap support for F2SGS2 as seed ortholog is 100%.

Group of orthologs #506. Best score 517 bits
Score difference with first non-orthologous sequence - C.neoformans:517 T.rubrum:517

P0CN42              	100.00%		F2SUE7              	100.00%
Bootstrap support for P0CN42 as seed ortholog is 100%.
Bootstrap support for F2SUE7 as seed ortholog is 100%.

Group of orthologs #507. Best score 517 bits
Score difference with first non-orthologous sequence - C.neoformans:386 T.rubrum:396

Q5KDQ7              	100.00%		F2SRH7              	100.00%
Bootstrap support for Q5KDQ7 as seed ortholog is 100%.
Bootstrap support for F2SRH7 as seed ortholog is 100%.

Group of orthologs #508. Best score 517 bits
Score difference with first non-orthologous sequence - C.neoformans:517 T.rubrum:517

Q5KP92              	100.00%		F2SHK3              	100.00%
Bootstrap support for Q5KP92 as seed ortholog is 100%.
Bootstrap support for F2SHK3 as seed ortholog is 100%.

Group of orthologs #509. Best score 515 bits
Score difference with first non-orthologous sequence - C.neoformans:228 T.rubrum:277

Q5KCK1              	100.00%		F2SE53              	100.00%
Bootstrap support for Q5KCK1 as seed ortholog is 99%.
Bootstrap support for F2SE53 as seed ortholog is 99%.

Group of orthologs #510. Best score 515 bits
Score difference with first non-orthologous sequence - C.neoformans:515 T.rubrum:515

Q5KJ46              	100.00%		F2SD48              	100.00%
Bootstrap support for Q5KJ46 as seed ortholog is 100%.
Bootstrap support for F2SD48 as seed ortholog is 100%.

Group of orthologs #511. Best score 515 bits
Score difference with first non-orthologous sequence - C.neoformans:25 T.rubrum:429

Q5KHE5              	100.00%		F2SFA1              	100.00%
Bootstrap support for Q5KHE5 as seed ortholog is 78%.
Bootstrap support for F2SFA1 as seed ortholog is 100%.

Group of orthologs #512. Best score 515 bits
Score difference with first non-orthologous sequence - C.neoformans:515 T.rubrum:515

Q5KKZ7              	100.00%		F2SUW2              	100.00%
Bootstrap support for Q5KKZ7 as seed ortholog is 100%.
Bootstrap support for F2SUW2 as seed ortholog is 100%.

Group of orthologs #513. Best score 512 bits
Score difference with first non-orthologous sequence - C.neoformans:512 T.rubrum:512

Q5KKJ5              	100.00%		F2SFT9              	100.00%
Bootstrap support for Q5KKJ5 as seed ortholog is 100%.
Bootstrap support for F2SFT9 as seed ortholog is 100%.

Group of orthologs #514. Best score 511 bits
Score difference with first non-orthologous sequence - C.neoformans:511 T.rubrum:511

Q5KJI8              	100.00%		F2SY60              	100.00%
Bootstrap support for Q5KJI8 as seed ortholog is 100%.
Bootstrap support for F2SY60 as seed ortholog is 100%.

Group of orthologs #515. Best score 510 bits
Score difference with first non-orthologous sequence - C.neoformans:510 T.rubrum:510

Q5K8F7              	100.00%		F2SEQ5              	100.00%
Bootstrap support for Q5K8F7 as seed ortholog is 100%.
Bootstrap support for F2SEQ5 as seed ortholog is 100%.

Group of orthologs #516. Best score 510 bits
Score difference with first non-orthologous sequence - C.neoformans:510 T.rubrum:510

P0CR56              	100.00%		F2SNK4              	100.00%
Bootstrap support for P0CR56 as seed ortholog is 100%.
Bootstrap support for F2SNK4 as seed ortholog is 100%.

Group of orthologs #517. Best score 509 bits
Score difference with first non-orthologous sequence - C.neoformans:509 T.rubrum:331

Q5KQ59              	100.00%		F2SLR7              	100.00%
Q5KAY9              	44.64%		
Bootstrap support for Q5KQ59 as seed ortholog is 100%.
Bootstrap support for F2SLR7 as seed ortholog is 100%.

Group of orthologs #518. Best score 509 bits
Score difference with first non-orthologous sequence - C.neoformans:509 T.rubrum:509

P0CQ08              	100.00%		F2SM86              	100.00%
Bootstrap support for P0CQ08 as seed ortholog is 100%.
Bootstrap support for F2SM86 as seed ortholog is 100%.

Group of orthologs #519. Best score 508 bits
Score difference with first non-orthologous sequence - C.neoformans:435 T.rubrum:296

Q5KG30              	100.00%		F2SSK8              	100.00%
Bootstrap support for Q5KG30 as seed ortholog is 100%.
Bootstrap support for F2SSK8 as seed ortholog is 100%.

Group of orthologs #520. Best score 508 bits
Score difference with first non-orthologous sequence - C.neoformans:508 T.rubrum:508

Q5KLR9              	100.00%		F2SPG9              	100.00%
Bootstrap support for Q5KLR9 as seed ortholog is 100%.
Bootstrap support for F2SPG9 as seed ortholog is 100%.

Group of orthologs #521. Best score 507 bits
Score difference with first non-orthologous sequence - C.neoformans:507 T.rubrum:507

P0CO78              	100.00%		F2SDD2              	100.00%
Bootstrap support for P0CO78 as seed ortholog is 100%.
Bootstrap support for F2SDD2 as seed ortholog is 100%.

Group of orthologs #522. Best score 507 bits
Score difference with first non-orthologous sequence - C.neoformans:191 T.rubrum:275

Q5KA87              	100.00%		F2SS47              	100.00%
Bootstrap support for Q5KA87 as seed ortholog is 100%.
Bootstrap support for F2SS47 as seed ortholog is 100%.

Group of orthologs #523. Best score 507 bits
Score difference with first non-orthologous sequence - C.neoformans:507 T.rubrum:507

Q5KM38              	100.00%		F2SI90              	100.00%
Bootstrap support for Q5KM38 as seed ortholog is 100%.
Bootstrap support for F2SI90 as seed ortholog is 100%.

Group of orthologs #524. Best score 505 bits
Score difference with first non-orthologous sequence - C.neoformans:413 T.rubrum:421

Q5KGZ3              	100.00%		F2SPT0              	100.00%
Bootstrap support for Q5KGZ3 as seed ortholog is 100%.
Bootstrap support for F2SPT0 as seed ortholog is 100%.

Group of orthologs #525. Best score 504 bits
Score difference with first non-orthologous sequence - C.neoformans:504 T.rubrum:504

Q5KML3              	100.00%		F2SVM7              	100.00%
Bootstrap support for Q5KML3 as seed ortholog is 100%.
Bootstrap support for F2SVM7 as seed ortholog is 100%.

Group of orthologs #526. Best score 503 bits
Score difference with first non-orthologous sequence - C.neoformans:503 T.rubrum:369

P0CR06              	100.00%		F2SI17              	100.00%
Bootstrap support for P0CR06 as seed ortholog is 100%.
Bootstrap support for F2SI17 as seed ortholog is 100%.

Group of orthologs #527. Best score 503 bits
Score difference with first non-orthologous sequence - C.neoformans:147 T.rubrum:244

Q5KKT2              	100.00%		F2SI74              	100.00%
Bootstrap support for Q5KKT2 as seed ortholog is 99%.
Bootstrap support for F2SI74 as seed ortholog is 100%.

Group of orthologs #528. Best score 503 bits
Score difference with first non-orthologous sequence - C.neoformans:389 T.rubrum:313

Q5KN70              	100.00%		F2SNF9              	100.00%
Bootstrap support for Q5KN70 as seed ortholog is 100%.
Bootstrap support for F2SNF9 as seed ortholog is 100%.

Group of orthologs #529. Best score 503 bits
Score difference with first non-orthologous sequence - C.neoformans:503 T.rubrum:503

Q5KII4              	100.00%		F2T144              	100.00%
Bootstrap support for Q5KII4 as seed ortholog is 100%.
Bootstrap support for F2T144 as seed ortholog is 100%.

Group of orthologs #530. Best score 502 bits
Score difference with first non-orthologous sequence - C.neoformans:502 T.rubrum:502

Q5KCP4              	100.00%		F2SE69              	100.00%
Bootstrap support for Q5KCP4 as seed ortholog is 100%.
Bootstrap support for F2SE69 as seed ortholog is 100%.

Group of orthologs #531. Best score 502 bits
Score difference with first non-orthologous sequence - C.neoformans:502 T.rubrum:502

Q5KMP3              	100.00%		F2SIE0              	100.00%
Bootstrap support for Q5KMP3 as seed ortholog is 100%.
Bootstrap support for F2SIE0 as seed ortholog is 100%.

Group of orthologs #532. Best score 502 bits
Score difference with first non-orthologous sequence - C.neoformans:451 T.rubrum:502

Q5KDZ3              	100.00%		F2STK5              	100.00%
Bootstrap support for Q5KDZ3 as seed ortholog is 100%.
Bootstrap support for F2STK5 as seed ortholog is 100%.

Group of orthologs #533. Best score 501 bits
Score difference with first non-orthologous sequence - C.neoformans:501 T.rubrum:501

Q5KBD0              	100.00%		F2SF20              	100.00%
Bootstrap support for Q5KBD0 as seed ortholog is 100%.
Bootstrap support for F2SF20 as seed ortholog is 100%.

Group of orthologs #534. Best score 501 bits
Score difference with first non-orthologous sequence - C.neoformans:501 T.rubrum:501

P0CQ36              	100.00%		F2SK91              	100.00%
Bootstrap support for P0CQ36 as seed ortholog is 100%.
Bootstrap support for F2SK91 as seed ortholog is 100%.

Group of orthologs #535. Best score 501 bits
Score difference with first non-orthologous sequence - C.neoformans:501 T.rubrum:501

Q5KMW2              	100.00%		F2SW22              	100.00%
Bootstrap support for Q5KMW2 as seed ortholog is 100%.
Bootstrap support for F2SW22 as seed ortholog is 100%.

Group of orthologs #536. Best score 500 bits
Score difference with first non-orthologous sequence - C.neoformans:500 T.rubrum:136

Q5K920              	100.00%		F2SC06              	100.00%
Bootstrap support for Q5K920 as seed ortholog is 100%.
Bootstrap support for F2SC06 as seed ortholog is 99%.

Group of orthologs #537. Best score 500 bits
Score difference with first non-orthologous sequence - C.neoformans:500 T.rubrum:500

Q5KNA0              	100.00%		F2SNZ6              	100.00%
Bootstrap support for Q5KNA0 as seed ortholog is 100%.
Bootstrap support for F2SNZ6 as seed ortholog is 100%.

Group of orthologs #538. Best score 499 bits
Score difference with first non-orthologous sequence - C.neoformans:499 T.rubrum:65

Q5K721              	100.00%		F2SJ89              	100.00%
Bootstrap support for Q5K721 as seed ortholog is 100%.
Bootstrap support for F2SJ89 as seed ortholog is 85%.

Group of orthologs #539. Best score 499 bits
Score difference with first non-orthologous sequence - C.neoformans:499 T.rubrum:499

Q5KAB5              	100.00%		F2SKI5              	100.00%
Bootstrap support for Q5KAB5 as seed ortholog is 100%.
Bootstrap support for F2SKI5 as seed ortholog is 100%.

Group of orthologs #540. Best score 499 bits
Score difference with first non-orthologous sequence - C.neoformans:499 T.rubrum:499

Q5KJN4              	100.00%		F2SGV4              	100.00%
Bootstrap support for Q5KJN4 as seed ortholog is 100%.
Bootstrap support for F2SGV4 as seed ortholog is 100%.

Group of orthologs #541. Best score 498 bits
Score difference with first non-orthologous sequence - C.neoformans:498 T.rubrum:498

P0CM40              	100.00%		F2SES2              	100.00%
Bootstrap support for P0CM40 as seed ortholog is 100%.
Bootstrap support for F2SES2 as seed ortholog is 100%.

Group of orthologs #542. Best score 498 bits
Score difference with first non-orthologous sequence - C.neoformans:498 T.rubrum:498

Q5K8F5              	100.00%		F2SN50              	100.00%
Bootstrap support for Q5K8F5 as seed ortholog is 100%.
Bootstrap support for F2SN50 as seed ortholog is 100%.

Group of orthologs #543. Best score 498 bits
Score difference with first non-orthologous sequence - C.neoformans:498 T.rubrum:498

Q5KCY4              	100.00%		F2SYA1              	100.00%
Bootstrap support for Q5KCY4 as seed ortholog is 100%.
Bootstrap support for F2SYA1 as seed ortholog is 100%.

Group of orthologs #544. Best score 497 bits
Score difference with first non-orthologous sequence - C.neoformans:497 T.rubrum:497

Q5K939              	100.00%		F2SCI1              	100.00%
Bootstrap support for Q5K939 as seed ortholog is 100%.
Bootstrap support for F2SCI1 as seed ortholog is 100%.

Group of orthologs #545. Best score 496 bits
Score difference with first non-orthologous sequence - C.neoformans:160 T.rubrum:434

Q5KC34              	100.00%		F2SDH4              	100.00%
Bootstrap support for Q5KC34 as seed ortholog is 99%.
Bootstrap support for F2SDH4 as seed ortholog is 100%.

Group of orthologs #546. Best score 496 bits
Score difference with first non-orthologous sequence - C.neoformans:496 T.rubrum:496

Q5KNS4              	100.00%		F2SEK8              	100.00%
Bootstrap support for Q5KNS4 as seed ortholog is 100%.
Bootstrap support for F2SEK8 as seed ortholog is 100%.

Group of orthologs #547. Best score 496 bits
Score difference with first non-orthologous sequence - C.neoformans:496 T.rubrum:496

Q5KMM8              	100.00%		F2SXA9              	100.00%
Bootstrap support for Q5KMM8 as seed ortholog is 100%.
Bootstrap support for F2SXA9 as seed ortholog is 100%.

Group of orthologs #548. Best score 495 bits
Score difference with first non-orthologous sequence - C.neoformans:400 T.rubrum:404

Q5KBV4              	100.00%		F2SC93              	100.00%
Bootstrap support for Q5KBV4 as seed ortholog is 100%.
Bootstrap support for F2SC93 as seed ortholog is 100%.

Group of orthologs #549. Best score 495 bits
Score difference with first non-orthologous sequence - C.neoformans:409 T.rubrum:413

Q5KCJ8              	100.00%		F2SD83              	100.00%
Bootstrap support for Q5KCJ8 as seed ortholog is 100%.
Bootstrap support for F2SD83 as seed ortholog is 100%.

Group of orthologs #550. Best score 495 bits
Score difference with first non-orthologous sequence - C.neoformans:495 T.rubrum:495

Q5KCP8              	100.00%		F2SE78              	100.00%
Bootstrap support for Q5KCP8 as seed ortholog is 100%.
Bootstrap support for F2SE78 as seed ortholog is 100%.

Group of orthologs #551. Best score 495 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubrum:495

P0CN74              	100.00%		F2SN90              	100.00%
Bootstrap support for P0CN74 as seed ortholog is 100%.
Bootstrap support for F2SN90 as seed ortholog is 100%.

Group of orthologs #552. Best score 495 bits
Score difference with first non-orthologous sequence - C.neoformans:444 T.rubrum:433

P0CS48              	100.00%		F2SRJ7              	100.00%
Bootstrap support for P0CS48 as seed ortholog is 100%.
Bootstrap support for F2SRJ7 as seed ortholog is 100%.

Group of orthologs #553. Best score 495 bits
Score difference with first non-orthologous sequence - C.neoformans:495 T.rubrum:495

Q5KGM9              	100.00%		F2SR72              	100.00%
Bootstrap support for Q5KGM9 as seed ortholog is 100%.
Bootstrap support for F2SR72 as seed ortholog is 100%.

Group of orthologs #554. Best score 494 bits
Score difference with first non-orthologous sequence - C.neoformans:494 T.rubrum:494

Q5K8W1              	100.00%		F2SYD4              	100.00%
Bootstrap support for Q5K8W1 as seed ortholog is 100%.
Bootstrap support for F2SYD4 as seed ortholog is 100%.

Group of orthologs #555. Best score 494 bits
Score difference with first non-orthologous sequence - C.neoformans:494 T.rubrum:101

Q5KNP4              	100.00%		F2SN43              	100.00%
Bootstrap support for Q5KNP4 as seed ortholog is 100%.
Bootstrap support for F2SN43 as seed ortholog is 98%.

Group of orthologs #556. Best score 494 bits
Score difference with first non-orthologous sequence - C.neoformans:494 T.rubrum:494

Q5KPE3              	100.00%		F2STN0              	100.00%
Bootstrap support for Q5KPE3 as seed ortholog is 100%.
Bootstrap support for F2STN0 as seed ortholog is 100%.

Group of orthologs #557. Best score 492 bits
Score difference with first non-orthologous sequence - C.neoformans:492 T.rubrum:413

Q5KDD7              	100.00%		F2SDH3              	100.00%
Bootstrap support for Q5KDD7 as seed ortholog is 100%.
Bootstrap support for F2SDH3 as seed ortholog is 100%.

Group of orthologs #558. Best score 492 bits
Score difference with first non-orthologous sequence - C.neoformans:215 T.rubrum:220

P0CN96              	100.00%		F2SP75              	100.00%
Bootstrap support for P0CN96 as seed ortholog is 100%.
Bootstrap support for F2SP75 as seed ortholog is 100%.

Group of orthologs #559. Best score 492 bits
Score difference with first non-orthologous sequence - C.neoformans:492 T.rubrum:492

Q5KP89              	100.00%		F2SBK2              	100.00%
Bootstrap support for Q5KP89 as seed ortholog is 100%.
Bootstrap support for F2SBK2 as seed ortholog is 100%.

Group of orthologs #560. Best score 492 bits
Score difference with first non-orthologous sequence - C.neoformans:492 T.rubrum:492

Q5KIT6              	100.00%		F2SQQ9              	100.00%
Bootstrap support for Q5KIT6 as seed ortholog is 100%.
Bootstrap support for F2SQQ9 as seed ortholog is 100%.

Group of orthologs #561. Best score 491 bits
Score difference with first non-orthologous sequence - C.neoformans:491 T.rubrum:491

Q5KNQ1              	100.00%		F2SCA3              	100.00%
Bootstrap support for Q5KNQ1 as seed ortholog is 100%.
Bootstrap support for F2SCA3 as seed ortholog is 100%.

Group of orthologs #562. Best score 491 bits
Score difference with first non-orthologous sequence - C.neoformans:491 T.rubrum:491

Q5KAB8              	100.00%		F2SWC4              	100.00%
Bootstrap support for Q5KAB8 as seed ortholog is 100%.
Bootstrap support for F2SWC4 as seed ortholog is 100%.

Group of orthologs #563. Best score 490 bits
Score difference with first non-orthologous sequence - C.neoformans:490 T.rubrum:245

Q5KPG1              	100.00%		F2SQ52              	100.00%
                    	       		F2SG74              	10.43%
Bootstrap support for Q5KPG1 as seed ortholog is 100%.
Bootstrap support for F2SQ52 as seed ortholog is 99%.

Group of orthologs #564. Best score 490 bits
Score difference with first non-orthologous sequence - C.neoformans:490 T.rubrum:490

Q5KK60              	100.00%		F2SSS2              	100.00%
Bootstrap support for Q5KK60 as seed ortholog is 100%.
Bootstrap support for F2SSS2 as seed ortholog is 100%.

Group of orthologs #565. Best score 490 bits
Score difference with first non-orthologous sequence - C.neoformans:490 T.rubrum:490

Q5KJ87              	100.00%		F2T0V4              	100.00%
Bootstrap support for Q5KJ87 as seed ortholog is 100%.
Bootstrap support for F2T0V4 as seed ortholog is 100%.

Group of orthologs #566. Best score 490 bits
Score difference with first non-orthologous sequence - C.neoformans:166 T.rubrum:490

Q5KKJ1              	100.00%		F2T115              	100.00%
Bootstrap support for Q5KKJ1 as seed ortholog is 99%.
Bootstrap support for F2T115 as seed ortholog is 100%.

Group of orthologs #567. Best score 489 bits
Score difference with first non-orthologous sequence - C.neoformans:489 T.rubrum:489

Q5KMM7              	100.00%		F2SZP5              	100.00%
Bootstrap support for Q5KMM7 as seed ortholog is 100%.
Bootstrap support for F2SZP5 as seed ortholog is 100%.

Group of orthologs #568. Best score 488 bits
Score difference with first non-orthologous sequence - C.neoformans:488 T.rubrum:488

Q5KNR0              	100.00%		F2SDT9              	100.00%
Bootstrap support for Q5KNR0 as seed ortholog is 100%.
Bootstrap support for F2SDT9 as seed ortholog is 100%.

Group of orthologs #569. Best score 488 bits
Score difference with first non-orthologous sequence - C.neoformans:275 T.rubrum:375

Q5KGJ1              	100.00%		F2SZ94              	100.00%
Bootstrap support for Q5KGJ1 as seed ortholog is 100%.
Bootstrap support for F2SZ94 as seed ortholog is 100%.

Group of orthologs #570. Best score 487 bits
Score difference with first non-orthologous sequence - C.neoformans:487 T.rubrum:487

Q5KJP4              	100.00%		F2SE88              	100.00%
Bootstrap support for Q5KJP4 as seed ortholog is 100%.
Bootstrap support for F2SE88 as seed ortholog is 100%.

Group of orthologs #571. Best score 486 bits
Score difference with first non-orthologous sequence - C.neoformans:486 T.rubrum:486

Q5KAM4              	100.00%		F2SS75              	100.00%
Bootstrap support for Q5KAM4 as seed ortholog is 100%.
Bootstrap support for F2SS75 as seed ortholog is 100%.

Group of orthologs #572. Best score 485 bits
Score difference with first non-orthologous sequence - C.neoformans:485 T.rubrum:9

Q5K7Z0              	100.00%		F2SKY5              	100.00%
Q5KHF3              	70.07%		
Q5KIM5              	7.45%		
Bootstrap support for Q5K7Z0 as seed ortholog is 100%.
Bootstrap support for F2SKY5 as seed ortholog is 59%.
Alternative seed ortholog is F2ST38 (9 bits away from this cluster)

Group of orthologs #573. Best score 485 bits
Score difference with first non-orthologous sequence - C.neoformans:345 T.rubrum:344

Q5K707              	100.00%		F2SWZ6              	100.00%
Bootstrap support for Q5K707 as seed ortholog is 100%.
Bootstrap support for F2SWZ6 as seed ortholog is 100%.

Group of orthologs #574. Best score 485 bits
Score difference with first non-orthologous sequence - C.neoformans:485 T.rubrum:485

Q5KB64              	100.00%		F2SWX0              	100.00%
Bootstrap support for Q5KB64 as seed ortholog is 100%.
Bootstrap support for F2SWX0 as seed ortholog is 100%.

Group of orthologs #575. Best score 484 bits
Score difference with first non-orthologous sequence - C.neoformans:484 T.rubrum:484

P0CM38              	100.00%		F2SNZ4              	100.00%
Bootstrap support for P0CM38 as seed ortholog is 100%.
Bootstrap support for F2SNZ4 as seed ortholog is 100%.

Group of orthologs #576. Best score 484 bits
Score difference with first non-orthologous sequence - C.neoformans:484 T.rubrum:484

Q5KMK4              	100.00%		F2SGH7              	100.00%
Bootstrap support for Q5KMK4 as seed ortholog is 100%.
Bootstrap support for F2SGH7 as seed ortholog is 100%.

Group of orthologs #577. Best score 484 bits
Score difference with first non-orthologous sequence - C.neoformans:302 T.rubrum:234

Q5KEJ1              	100.00%		F2SXK9              	100.00%
Bootstrap support for Q5KEJ1 as seed ortholog is 100%.
Bootstrap support for F2SXK9 as seed ortholog is 99%.

Group of orthologs #578. Best score 483 bits
Score difference with first non-orthologous sequence - C.neoformans:483 T.rubrum:483

Q5KDR1              	100.00%		F2SNH5              	100.00%
Bootstrap support for Q5KDR1 as seed ortholog is 100%.
Bootstrap support for F2SNH5 as seed ortholog is 100%.

Group of orthologs #579. Best score 483 bits
Score difference with first non-orthologous sequence - C.neoformans:483 T.rubrum:483

Q5KLM1              	100.00%		F2SSD8              	100.00%
Bootstrap support for Q5KLM1 as seed ortholog is 100%.
Bootstrap support for F2SSD8 as seed ortholog is 100%.

Group of orthologs #580. Best score 482 bits
Score difference with first non-orthologous sequence - C.neoformans:57 T.rubrum:146

Q5KFY6              	100.00%		F2SM84              	100.00%
Bootstrap support for Q5KFY6 as seed ortholog is 96%.
Bootstrap support for F2SM84 as seed ortholog is 99%.

Group of orthologs #581. Best score 482 bits
Score difference with first non-orthologous sequence - C.neoformans:482 T.rubrum:482

Q5KDX5              	100.00%		F2STU3              	100.00%
Bootstrap support for Q5KDX5 as seed ortholog is 100%.
Bootstrap support for F2STU3 as seed ortholog is 100%.

Group of orthologs #582. Best score 481 bits
Score difference with first non-orthologous sequence - C.neoformans:481 T.rubrum:481

Q5K7X0              	100.00%		F2SE55              	100.00%
Bootstrap support for Q5K7X0 as seed ortholog is 100%.
Bootstrap support for F2SE55 as seed ortholog is 100%.

Group of orthologs #583. Best score 480 bits
Score difference with first non-orthologous sequence - C.neoformans:480 T.rubrum:480

Q5KJI5              	100.00%		F2SBX7              	100.00%
Bootstrap support for Q5KJI5 as seed ortholog is 100%.
Bootstrap support for F2SBX7 as seed ortholog is 100%.

Group of orthologs #584. Best score 480 bits
Score difference with first non-orthologous sequence - C.neoformans:480 T.rubrum:187

Q5KE92              	100.00%		F2SLC7              	100.00%
Bootstrap support for Q5KE92 as seed ortholog is 100%.
Bootstrap support for F2SLC7 as seed ortholog is 99%.

Group of orthologs #585. Best score 480 bits
Score difference with first non-orthologous sequence - C.neoformans:480 T.rubrum:480

Q5KEU9              	100.00%		F2SLX1              	100.00%
Bootstrap support for Q5KEU9 as seed ortholog is 100%.
Bootstrap support for F2SLX1 as seed ortholog is 100%.

Group of orthologs #586. Best score 480 bits
Score difference with first non-orthologous sequence - C.neoformans:480 T.rubrum:480

Q5KAS4              	100.00%		F2T174              	100.00%
Bootstrap support for Q5KAS4 as seed ortholog is 100%.
Bootstrap support for F2T174 as seed ortholog is 100%.

Group of orthologs #587. Best score 480 bits
Score difference with first non-orthologous sequence - C.neoformans:480 T.rubrum:480

Q5KH19              	100.00%		F2SZT0              	100.00%
Bootstrap support for Q5KH19 as seed ortholog is 100%.
Bootstrap support for F2SZT0 as seed ortholog is 100%.

Group of orthologs #588. Best score 479 bits
Score difference with first non-orthologous sequence - C.neoformans:479 T.rubrum:479

P0CP26              	100.00%		F2SEA3              	100.00%
Bootstrap support for P0CP26 as seed ortholog is 100%.
Bootstrap support for F2SEA3 as seed ortholog is 100%.

Group of orthologs #589. Best score 479 bits
Score difference with first non-orthologous sequence - C.neoformans:366 T.rubrum:405

Q5KHS6              	100.00%		F2SVV0              	100.00%
Bootstrap support for Q5KHS6 as seed ortholog is 100%.
Bootstrap support for F2SVV0 as seed ortholog is 100%.

Group of orthologs #590. Best score 478 bits
Score difference with first non-orthologous sequence - C.neoformans:422 T.rubrum:394

Q5K7W2              	100.00%		F2SFR9              	100.00%
Q5K7W1              	50.34%		
Bootstrap support for Q5K7W2 as seed ortholog is 100%.
Bootstrap support for F2SFR9 as seed ortholog is 100%.

Group of orthologs #591. Best score 478 bits
Score difference with first non-orthologous sequence - C.neoformans:264 T.rubrum:72

Q5KEL2              	100.00%		F2SE85              	100.00%
Bootstrap support for Q5KEL2 as seed ortholog is 100%.
Bootstrap support for F2SE85 as seed ortholog is 94%.

Group of orthologs #592. Best score 478 bits
Score difference with first non-orthologous sequence - C.neoformans:478 T.rubrum:478

Q5K843              	100.00%		F2SNG7              	100.00%
Bootstrap support for Q5K843 as seed ortholog is 100%.
Bootstrap support for F2SNG7 as seed ortholog is 100%.

Group of orthologs #593. Best score 478 bits
Score difference with first non-orthologous sequence - C.neoformans:478 T.rubrum:478

Q5KNF0              	100.00%		F2SF04              	100.00%
Bootstrap support for Q5KNF0 as seed ortholog is 100%.
Bootstrap support for F2SF04 as seed ortholog is 100%.

Group of orthologs #594. Best score 478 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubrum:235

Q5KNB7              	100.00%		F2SMR7              	100.00%
Bootstrap support for Q5KNB7 as seed ortholog is 96%.
Bootstrap support for F2SMR7 as seed ortholog is 100%.

Group of orthologs #595. Best score 477 bits
Score difference with first non-orthologous sequence - C.neoformans:477 T.rubrum:315

Q5KFA8              	100.00%		F2SD42              	100.00%
Bootstrap support for Q5KFA8 as seed ortholog is 100%.
Bootstrap support for F2SD42 as seed ortholog is 100%.

Group of orthologs #596. Best score 477 bits
Score difference with first non-orthologous sequence - C.neoformans:477 T.rubrum:255

Q5KHF6              	100.00%		F2SNW0              	100.00%
Bootstrap support for Q5KHF6 as seed ortholog is 100%.
Bootstrap support for F2SNW0 as seed ortholog is 99%.

Group of orthologs #597. Best score 476 bits
Score difference with first non-orthologous sequence - C.neoformans:476 T.rubrum:476

Q5KHS3              	100.00%		F2SNG0              	100.00%
Bootstrap support for Q5KHS3 as seed ortholog is 100%.
Bootstrap support for F2SNG0 as seed ortholog is 100%.

Group of orthologs #598. Best score 476 bits
Score difference with first non-orthologous sequence - C.neoformans:476 T.rubrum:476

Q5KCK3              	100.00%		F2SZY6              	100.00%
Bootstrap support for Q5KCK3 as seed ortholog is 100%.
Bootstrap support for F2SZY6 as seed ortholog is 100%.

Group of orthologs #599. Best score 476 bits
Score difference with first non-orthologous sequence - C.neoformans:476 T.rubrum:476

Q5KNC3              	100.00%		F2SRN2              	100.00%
Bootstrap support for Q5KNC3 as seed ortholog is 100%.
Bootstrap support for F2SRN2 as seed ortholog is 100%.

Group of orthologs #600. Best score 475 bits
Score difference with first non-orthologous sequence - C.neoformans:475 T.rubrum:243

Q5KDV3              	100.00%		F2SF72              	100.00%
Q5KJX0              	100.00%		
Bootstrap support for Q5KDV3 as seed ortholog is 100%.
Bootstrap support for Q5KJX0 as seed ortholog is 100%.
Bootstrap support for F2SF72 as seed ortholog is 100%.

Group of orthologs #601. Best score 475 bits
Score difference with first non-orthologous sequence - C.neoformans:475 T.rubrum:475

Q5KEK9              	100.00%		F2SQH0              	100.00%
Bootstrap support for Q5KEK9 as seed ortholog is 100%.
Bootstrap support for F2SQH0 as seed ortholog is 100%.

Group of orthologs #602. Best score 475 bits
Score difference with first non-orthologous sequence - C.neoformans:475 T.rubrum:475

Q5KES4              	100.00%		F2SVI8              	100.00%
Bootstrap support for Q5KES4 as seed ortholog is 100%.
Bootstrap support for F2SVI8 as seed ortholog is 100%.

Group of orthologs #603. Best score 475 bits
Score difference with first non-orthologous sequence - C.neoformans:357 T.rubrum:408

Q5KF13              	100.00%		F2SVP1              	100.00%
Bootstrap support for Q5KF13 as seed ortholog is 100%.
Bootstrap support for F2SVP1 as seed ortholog is 100%.

Group of orthologs #604. Best score 474 bits
Score difference with first non-orthologous sequence - C.neoformans:474 T.rubrum:388

Q5KQ65              	100.00%		F2SHH3              	100.00%
                    	       		F2SLX0              	19.87%
Bootstrap support for Q5KQ65 as seed ortholog is 100%.
Bootstrap support for F2SHH3 as seed ortholog is 100%.

Group of orthologs #605. Best score 474 bits
Score difference with first non-orthologous sequence - C.neoformans:396 T.rubrum:474

Q5KDJ3              	100.00%		F2T0Q5              	100.00%
Bootstrap support for Q5KDJ3 as seed ortholog is 100%.
Bootstrap support for F2T0Q5 as seed ortholog is 100%.

Group of orthologs #606. Best score 474 bits
Score difference with first non-orthologous sequence - C.neoformans:356 T.rubrum:474

Q5KKQ9              	100.00%		F2SXE8              	100.00%
Bootstrap support for Q5KKQ9 as seed ortholog is 100%.
Bootstrap support for F2SXE8 as seed ortholog is 100%.

Group of orthologs #607. Best score 473 bits
Score difference with first non-orthologous sequence - C.neoformans:473 T.rubrum:473

P0CN48              	100.00%		F2SG13              	100.00%
Bootstrap support for P0CN48 as seed ortholog is 100%.
Bootstrap support for F2SG13 as seed ortholog is 100%.

Group of orthologs #608. Best score 473 bits
Score difference with first non-orthologous sequence - C.neoformans:305 T.rubrum:320

P0CR10              	100.00%		F2SLD6              	100.00%
Bootstrap support for P0CR10 as seed ortholog is 100%.
Bootstrap support for F2SLD6 as seed ortholog is 100%.

Group of orthologs #609. Best score 473 bits
Score difference with first non-orthologous sequence - C.neoformans:473 T.rubrum:473

Q5K9J9              	100.00%		F2SJ19              	100.00%
Bootstrap support for Q5K9J9 as seed ortholog is 100%.
Bootstrap support for F2SJ19 as seed ortholog is 100%.

Group of orthologs #610. Best score 473 bits
Score difference with first non-orthologous sequence - C.neoformans:473 T.rubrum:473

Q5K7P2              	100.00%		F2SPT5              	100.00%
Bootstrap support for Q5K7P2 as seed ortholog is 100%.
Bootstrap support for F2SPT5 as seed ortholog is 100%.

Group of orthologs #611. Best score 473 bits
Score difference with first non-orthologous sequence - C.neoformans:473 T.rubrum:473

P0CQ14              	100.00%		F2SVJ8              	100.00%
Bootstrap support for P0CQ14 as seed ortholog is 100%.
Bootstrap support for F2SVJ8 as seed ortholog is 100%.

Group of orthologs #612. Best score 472 bits
Score difference with first non-orthologous sequence - C.neoformans:472 T.rubrum:472

Q5K7E6              	100.00%		F2SLQ6              	100.00%
Bootstrap support for Q5K7E6 as seed ortholog is 100%.
Bootstrap support for F2SLQ6 as seed ortholog is 100%.

Group of orthologs #613. Best score 472 bits
Score difference with first non-orthologous sequence - C.neoformans:472 T.rubrum:472

Q5KCX4              	100.00%		F2SJZ5              	100.00%
Bootstrap support for Q5KCX4 as seed ortholog is 100%.
Bootstrap support for F2SJZ5 as seed ortholog is 100%.

Group of orthologs #614. Best score 471 bits
Score difference with first non-orthologous sequence - C.neoformans:387 T.rubrum:399

Q5KE74              	100.00%		F2SDB8              	100.00%
Bootstrap support for Q5KE74 as seed ortholog is 100%.
Bootstrap support for F2SDB8 as seed ortholog is 100%.

Group of orthologs #615. Best score 471 bits
Score difference with first non-orthologous sequence - C.neoformans:138 T.rubrum:471

Q5K758              	100.00%		F2SMF6              	100.00%
Bootstrap support for Q5K758 as seed ortholog is 99%.
Bootstrap support for F2SMF6 as seed ortholog is 100%.

Group of orthologs #616. Best score 470 bits
Score difference with first non-orthologous sequence - C.neoformans:470 T.rubrum:356

Q5KBY0              	100.00%		F2SIA2              	100.00%
Bootstrap support for Q5KBY0 as seed ortholog is 100%.
Bootstrap support for F2SIA2 as seed ortholog is 100%.

Group of orthologs #617. Best score 470 bits
Score difference with first non-orthologous sequence - C.neoformans:470 T.rubrum:470

P0CP22              	100.00%		F2SY78              	100.00%
Bootstrap support for P0CP22 as seed ortholog is 100%.
Bootstrap support for F2SY78 as seed ortholog is 100%.

Group of orthologs #618. Best score 469 bits
Score difference with first non-orthologous sequence - C.neoformans:469 T.rubrum:469

P0CN84              	100.00%		F2SD77              	100.00%
Bootstrap support for P0CN84 as seed ortholog is 100%.
Bootstrap support for F2SD77 as seed ortholog is 100%.

Group of orthologs #619. Best score 469 bits
Score difference with first non-orthologous sequence - C.neoformans:214 T.rubrum:400

Q5KDT4              	100.00%		F2SHP4              	100.00%
Bootstrap support for Q5KDT4 as seed ortholog is 100%.
Bootstrap support for F2SHP4 as seed ortholog is 100%.

Group of orthologs #620. Best score 468 bits
Score difference with first non-orthologous sequence - C.neoformans:324 T.rubrum:468

Q5KAD7              	100.00%		F2SHE0              	100.00%
Bootstrap support for Q5KAD7 as seed ortholog is 100%.
Bootstrap support for F2SHE0 as seed ortholog is 100%.

Group of orthologs #621. Best score 468 bits
Score difference with first non-orthologous sequence - C.neoformans:468 T.rubrum:468

Q5KBU1              	100.00%		F2SIZ2              	100.00%
Bootstrap support for Q5KBU1 as seed ortholog is 100%.
Bootstrap support for F2SIZ2 as seed ortholog is 100%.

Group of orthologs #622. Best score 468 bits
Score difference with first non-orthologous sequence - C.neoformans:468 T.rubrum:468

Q5KP72              	100.00%		F2SV39              	100.00%
Bootstrap support for Q5KP72 as seed ortholog is 100%.
Bootstrap support for F2SV39 as seed ortholog is 100%.

Group of orthologs #623. Best score 467 bits
Score difference with first non-orthologous sequence - C.neoformans:316 T.rubrum:467

P0CP02              	100.00%		F2SQW8              	100.00%
Bootstrap support for P0CP02 as seed ortholog is 100%.
Bootstrap support for F2SQW8 as seed ortholog is 100%.

Group of orthologs #624. Best score 467 bits
Score difference with first non-orthologous sequence - C.neoformans:467 T.rubrum:301

Q5KCX1              	100.00%		F2T0R9              	100.00%
Bootstrap support for Q5KCX1 as seed ortholog is 100%.
Bootstrap support for F2T0R9 as seed ortholog is 100%.

Group of orthologs #625. Best score 466 bits
Score difference with first non-orthologous sequence - C.neoformans:466 T.rubrum:466

Q5KIX9              	100.00%		F2SHY3              	100.00%
Bootstrap support for Q5KIX9 as seed ortholog is 100%.
Bootstrap support for F2SHY3 as seed ortholog is 100%.

Group of orthologs #626. Best score 466 bits
Score difference with first non-orthologous sequence - C.neoformans:466 T.rubrum:466

Q5KH75              	100.00%		F2SVL8              	100.00%
Bootstrap support for Q5KH75 as seed ortholog is 100%.
Bootstrap support for F2SVL8 as seed ortholog is 100%.

Group of orthologs #627. Best score 465 bits
Score difference with first non-orthologous sequence - C.neoformans:371 T.rubrum:465

Q5KHR9              	100.00%		F2SJ05              	100.00%
Bootstrap support for Q5KHR9 as seed ortholog is 100%.
Bootstrap support for F2SJ05 as seed ortholog is 100%.

Group of orthologs #628. Best score 465 bits
Score difference with first non-orthologous sequence - C.neoformans:201 T.rubrum:199

Q5KLR7              	100.00%		F2SUF5              	100.00%
Bootstrap support for Q5KLR7 as seed ortholog is 100%.
Bootstrap support for F2SUF5 as seed ortholog is 100%.

Group of orthologs #629. Best score 464 bits
Score difference with first non-orthologous sequence - C.neoformans:464 T.rubrum:464

Q5KKT3              	100.00%		F2SM97              	100.00%
Bootstrap support for Q5KKT3 as seed ortholog is 100%.
Bootstrap support for F2SM97 as seed ortholog is 100%.

Group of orthologs #630. Best score 463 bits
Score difference with first non-orthologous sequence - C.neoformans:463 T.rubrum:463

Q5K7Y1              	100.00%		F2SWK3              	100.00%
Bootstrap support for Q5K7Y1 as seed ortholog is 100%.
Bootstrap support for F2SWK3 as seed ortholog is 100%.

Group of orthologs #631. Best score 462 bits
Score difference with first non-orthologous sequence - C.neoformans:272 T.rubrum:295

Q5K8F6              	100.00%		F2SFX8              	100.00%
Bootstrap support for Q5K8F6 as seed ortholog is 100%.
Bootstrap support for F2SFX8 as seed ortholog is 100%.

Group of orthologs #632. Best score 461 bits
Score difference with first non-orthologous sequence - C.neoformans:461 T.rubrum:334

Q5KGI9              	100.00%		F2SBU8              	100.00%
Bootstrap support for Q5KGI9 as seed ortholog is 100%.
Bootstrap support for F2SBU8 as seed ortholog is 100%.

Group of orthologs #633. Best score 461 bits
Score difference with first non-orthologous sequence - C.neoformans:298 T.rubrum:461

Q5KKX9              	100.00%		F2SPR2              	100.00%
Bootstrap support for Q5KKX9 as seed ortholog is 98%.
Bootstrap support for F2SPR2 as seed ortholog is 100%.

Group of orthologs #634. Best score 461 bits
Score difference with first non-orthologous sequence - C.neoformans:461 T.rubrum:461

Q5KKB4              	100.00%		F2SVI7              	100.00%
Bootstrap support for Q5KKB4 as seed ortholog is 100%.
Bootstrap support for F2SVI7 as seed ortholog is 100%.

Group of orthologs #635. Best score 461 bits
Score difference with first non-orthologous sequence - C.neoformans:461 T.rubrum:461

Q5KJ97              	100.00%		F2SXY3              	100.00%
Bootstrap support for Q5KJ97 as seed ortholog is 100%.
Bootstrap support for F2SXY3 as seed ortholog is 100%.

Group of orthologs #636. Best score 460 bits
Score difference with first non-orthologous sequence - C.neoformans:460 T.rubrum:460

Q5KAU8              	100.00%		F2SEC6              	100.00%
                    	       		F2SCV9              	26.20%
Bootstrap support for Q5KAU8 as seed ortholog is 100%.
Bootstrap support for F2SEC6 as seed ortholog is 100%.

Group of orthologs #637. Best score 460 bits
Score difference with first non-orthologous sequence - C.neoformans:460 T.rubrum:460

Q5KAF6              	100.00%		F2SJR6              	100.00%
Bootstrap support for Q5KAF6 as seed ortholog is 100%.
Bootstrap support for F2SJR6 as seed ortholog is 100%.

Group of orthologs #638. Best score 460 bits
Score difference with first non-orthologous sequence - C.neoformans:281 T.rubrum:70

Q5KP01              	100.00%		F2SXB8              	100.00%
Bootstrap support for Q5KP01 as seed ortholog is 100%.
Bootstrap support for F2SXB8 as seed ortholog is 97%.

Group of orthologs #639. Best score 459 bits
Score difference with first non-orthologous sequence - C.neoformans:459 T.rubrum:459

Q5KFM9              	100.00%		F2SJY9              	100.00%
Bootstrap support for Q5KFM9 as seed ortholog is 100%.
Bootstrap support for F2SJY9 as seed ortholog is 100%.

Group of orthologs #640. Best score 459 bits
Score difference with first non-orthologous sequence - C.neoformans:459 T.rubrum:410

Q5KPR1              	100.00%		F2SKM5              	100.00%
Bootstrap support for Q5KPR1 as seed ortholog is 100%.
Bootstrap support for F2SKM5 as seed ortholog is 100%.

Group of orthologs #641. Best score 458 bits
Score difference with first non-orthologous sequence - C.neoformans:458 T.rubrum:458

P0CQ34              	100.00%		F2SXX6              	100.00%
Bootstrap support for P0CQ34 as seed ortholog is 100%.
Bootstrap support for F2SXX6 as seed ortholog is 100%.

Group of orthologs #642. Best score 458 bits
Score difference with first non-orthologous sequence - C.neoformans:124 T.rubrum:458

Q5KCS8              	100.00%		F2SWE7              	100.00%
Bootstrap support for Q5KCS8 as seed ortholog is 99%.
Bootstrap support for F2SWE7 as seed ortholog is 100%.

Group of orthologs #643. Best score 458 bits
Score difference with first non-orthologous sequence - C.neoformans:458 T.rubrum:458

Q5K8I1              	100.00%		F2T135              	100.00%
Bootstrap support for Q5K8I1 as seed ortholog is 100%.
Bootstrap support for F2T135 as seed ortholog is 100%.

Group of orthologs #644. Best score 457 bits
Score difference with first non-orthologous sequence - C.neoformans:347 T.rubrum:370

Q5KJQ2              	100.00%		F2SF53              	100.00%
Bootstrap support for Q5KJQ2 as seed ortholog is 100%.
Bootstrap support for F2SF53 as seed ortholog is 100%.

Group of orthologs #645. Best score 456 bits
Score difference with first non-orthologous sequence - C.neoformans:456 T.rubrum:456

Q5KHI3              	100.00%		F2SBR6              	100.00%
Bootstrap support for Q5KHI3 as seed ortholog is 100%.
Bootstrap support for F2SBR6 as seed ortholog is 100%.

Group of orthologs #646. Best score 456 bits
Score difference with first non-orthologous sequence - C.neoformans:456 T.rubrum:283

Q5K8L9              	100.00%		F2SPS2              	100.00%
Bootstrap support for Q5K8L9 as seed ortholog is 100%.
Bootstrap support for F2SPS2 as seed ortholog is 100%.

Group of orthologs #647. Best score 456 bits
Score difference with first non-orthologous sequence - C.neoformans:66 T.rubrum:74

Q5KGZ2              	100.00%		F2SRP6              	100.00%
Bootstrap support for Q5KGZ2 as seed ortholog is 92%.
Bootstrap support for F2SRP6 as seed ortholog is 97%.

Group of orthologs #648. Best score 456 bits
Score difference with first non-orthologous sequence - C.neoformans:322 T.rubrum:320

Q5KFW7              	100.00%		F2SZ27              	100.00%
Bootstrap support for Q5KFW7 as seed ortholog is 100%.
Bootstrap support for F2SZ27 as seed ortholog is 100%.

Group of orthologs #649. Best score 454 bits
Score difference with first non-orthologous sequence - C.neoformans:143 T.rubrum:155

Q5KPS8              	100.00%		F2SZ62              	100.00%
Bootstrap support for Q5KPS8 as seed ortholog is 100%.
Bootstrap support for F2SZ62 as seed ortholog is 100%.

Group of orthologs #650. Best score 453 bits
Score difference with first non-orthologous sequence - C.neoformans:453 T.rubrum:299

P0CQ18              	100.00%		F2SK21              	100.00%
P0CQ20              	45.64%		
Bootstrap support for P0CQ18 as seed ortholog is 100%.
Bootstrap support for F2SK21 as seed ortholog is 100%.

Group of orthologs #651. Best score 453 bits
Score difference with first non-orthologous sequence - C.neoformans:453 T.rubrum:453

P0CM58              	100.00%		F2SXR9              	100.00%
                    	       		F2SXM6              	16.67%
Bootstrap support for P0CM58 as seed ortholog is 100%.
Bootstrap support for F2SXR9 as seed ortholog is 100%.

Group of orthologs #652. Best score 453 bits
Score difference with first non-orthologous sequence - C.neoformans:453 T.rubrum:453

Q5K9F2              	100.00%		F2SD41              	100.00%
Bootstrap support for Q5K9F2 as seed ortholog is 100%.
Bootstrap support for F2SD41 as seed ortholog is 100%.

Group of orthologs #653. Best score 453 bits
Score difference with first non-orthologous sequence - C.neoformans:453 T.rubrum:453

Q5KJE3              	100.00%		F2SPT2              	100.00%
Bootstrap support for Q5KJE3 as seed ortholog is 100%.
Bootstrap support for F2SPT2 as seed ortholog is 100%.

Group of orthologs #654. Best score 452 bits
Score difference with first non-orthologous sequence - C.neoformans:452 T.rubrum:452

Q5K8S0              	100.00%		F2SE18              	100.00%
Bootstrap support for Q5K8S0 as seed ortholog is 100%.
Bootstrap support for F2SE18 as seed ortholog is 100%.

Group of orthologs #655. Best score 451 bits
Score difference with first non-orthologous sequence - C.neoformans:370 T.rubrum:451

Q5KD56              	100.00%		F2SLN8              	100.00%
Bootstrap support for Q5KD56 as seed ortholog is 100%.
Bootstrap support for F2SLN8 as seed ortholog is 100%.

Group of orthologs #656. Best score 451 bits
Score difference with first non-orthologous sequence - C.neoformans:451 T.rubrum:451

Q5KKM6              	100.00%		F2SKV0              	100.00%
Bootstrap support for Q5KKM6 as seed ortholog is 100%.
Bootstrap support for F2SKV0 as seed ortholog is 100%.

Group of orthologs #657. Best score 449 bits
Score difference with first non-orthologous sequence - C.neoformans:449 T.rubrum:449

Q5KL05              	100.00%		F2SIF3              	100.00%
Bootstrap support for Q5KL05 as seed ortholog is 100%.
Bootstrap support for F2SIF3 as seed ortholog is 100%.

Group of orthologs #658. Best score 448 bits
Score difference with first non-orthologous sequence - C.neoformans:448 T.rubrum:394

Q5KND5              	100.00%		F2SBR3              	100.00%
Bootstrap support for Q5KND5 as seed ortholog is 100%.
Bootstrap support for F2SBR3 as seed ortholog is 100%.

Group of orthologs #659. Best score 448 bits
Score difference with first non-orthologous sequence - C.neoformans:448 T.rubrum:448

Q5KFM3              	100.00%		F2SY49              	100.00%
Bootstrap support for Q5KFM3 as seed ortholog is 100%.
Bootstrap support for F2SY49 as seed ortholog is 100%.

Group of orthologs #660. Best score 448 bits
Score difference with first non-orthologous sequence - C.neoformans:448 T.rubrum:448

Q5KKS5              	100.00%		F2SV08              	100.00%
Bootstrap support for Q5KKS5 as seed ortholog is 100%.
Bootstrap support for F2SV08 as seed ortholog is 100%.

Group of orthologs #661. Best score 447 bits
Score difference with first non-orthologous sequence - C.neoformans:447 T.rubrum:352

Q5KCC8              	100.00%		F2SX55              	100.00%
Bootstrap support for Q5KCC8 as seed ortholog is 100%.
Bootstrap support for F2SX55 as seed ortholog is 100%.

Group of orthologs #662. Best score 446 bits
Score difference with first non-orthologous sequence - C.neoformans:446 T.rubrum:446

Q5KH56              	100.00%		F2SGL4              	100.00%
Bootstrap support for Q5KH56 as seed ortholog is 100%.
Bootstrap support for F2SGL4 as seed ortholog is 100%.

Group of orthologs #663. Best score 445 bits
Score difference with first non-orthologous sequence - C.neoformans:404 T.rubrum:335

Q5KDR8              	100.00%		F2SHJ3              	100.00%
Bootstrap support for Q5KDR8 as seed ortholog is 100%.
Bootstrap support for F2SHJ3 as seed ortholog is 100%.

Group of orthologs #664. Best score 444 bits
Score difference with first non-orthologous sequence - C.neoformans:444 T.rubrum:444

Q5KJD3              	100.00%		F2SGZ5              	100.00%
                    	       		F2SU50              	7.41%
Bootstrap support for Q5KJD3 as seed ortholog is 100%.
Bootstrap support for F2SGZ5 as seed ortholog is 100%.

Group of orthologs #665. Best score 444 bits
Score difference with first non-orthologous sequence - C.neoformans:444 T.rubrum:444

P0CO88              	100.00%		F2SGJ4              	100.00%
Bootstrap support for P0CO88 as seed ortholog is 100%.
Bootstrap support for F2SGJ4 as seed ortholog is 100%.

Group of orthologs #666. Best score 444 bits
Score difference with first non-orthologous sequence - C.neoformans:444 T.rubrum:444

Q5KGV7              	100.00%		F2SKE5              	100.00%
Bootstrap support for Q5KGV7 as seed ortholog is 100%.
Bootstrap support for F2SKE5 as seed ortholog is 100%.

Group of orthologs #667. Best score 443 bits
Score difference with first non-orthologous sequence - C.neoformans:443 T.rubrum:443

Q5KKT7              	100.00%		F2SS19              	100.00%
Bootstrap support for Q5KKT7 as seed ortholog is 100%.
Bootstrap support for F2SS19 as seed ortholog is 100%.

Group of orthologs #668. Best score 442 bits
Score difference with first non-orthologous sequence - C.neoformans:217 T.rubrum:133

Q5KDB7              	100.00%		F2SKR0              	100.00%
Bootstrap support for Q5KDB7 as seed ortholog is 99%.
Bootstrap support for F2SKR0 as seed ortholog is 98%.

Group of orthologs #669. Best score 441 bits
Score difference with first non-orthologous sequence - C.neoformans:441 T.rubrum:441

Q5KB45              	100.00%		F2SQB2              	100.00%
Bootstrap support for Q5KB45 as seed ortholog is 100%.
Bootstrap support for F2SQB2 as seed ortholog is 100%.

Group of orthologs #670. Best score 441 bits
Score difference with first non-orthologous sequence - C.neoformans:441 T.rubrum:441

P0CP30              	100.00%		F2SW76              	100.00%
Bootstrap support for P0CP30 as seed ortholog is 100%.
Bootstrap support for F2SW76 as seed ortholog is 100%.

Group of orthologs #671. Best score 441 bits
Score difference with first non-orthologous sequence - C.neoformans:31 T.rubrum:147

Q5KCB9              	100.00%		F2SY33              	100.00%
Bootstrap support for Q5KCB9 as seed ortholog is 76%.
Bootstrap support for F2SY33 as seed ortholog is 99%.

Group of orthologs #672. Best score 440 bits
Score difference with first non-orthologous sequence - C.neoformans:440 T.rubrum:440

Q5KC90              	100.00%		F2SGM1              	100.00%
Bootstrap support for Q5KC90 as seed ortholog is 100%.
Bootstrap support for F2SGM1 as seed ortholog is 100%.

Group of orthologs #673. Best score 440 bits
Score difference with first non-orthologous sequence - C.neoformans:440 T.rubrum:440

Q5KDK0              	100.00%		F2SM23              	100.00%
Bootstrap support for Q5KDK0 as seed ortholog is 100%.
Bootstrap support for F2SM23 as seed ortholog is 100%.

Group of orthologs #674. Best score 440 bits
Score difference with first non-orthologous sequence - C.neoformans:440 T.rubrum:440

Q5KPL0              	100.00%		F2STX9              	100.00%
Bootstrap support for Q5KPL0 as seed ortholog is 100%.
Bootstrap support for F2STX9 as seed ortholog is 100%.

Group of orthologs #675. Best score 438 bits
Score difference with first non-orthologous sequence - C.neoformans:438 T.rubrum:39

Q5KED2              	100.00%		F2SD28              	100.00%
Bootstrap support for Q5KED2 as seed ortholog is 100%.
Bootstrap support for F2SD28 as seed ortholog is 97%.

Group of orthologs #676. Best score 438 bits
Score difference with first non-orthologous sequence - C.neoformans:438 T.rubrum:438

P0CO32              	100.00%		F2SQZ4              	100.00%
Bootstrap support for P0CO32 as seed ortholog is 100%.
Bootstrap support for F2SQZ4 as seed ortholog is 100%.

Group of orthologs #677. Best score 438 bits
Score difference with first non-orthologous sequence - C.neoformans:438 T.rubrum:387

Q5KEY9              	100.00%		F2SQP4              	100.00%
Bootstrap support for Q5KEY9 as seed ortholog is 100%.
Bootstrap support for F2SQP4 as seed ortholog is 100%.

Group of orthologs #678. Best score 438 bits
Score difference with first non-orthologous sequence - C.neoformans:438 T.rubrum:438

Q5KGZ9              	100.00%		F2SUZ7              	100.00%
Bootstrap support for Q5KGZ9 as seed ortholog is 100%.
Bootstrap support for F2SUZ7 as seed ortholog is 100%.

Group of orthologs #679. Best score 438 bits
Score difference with first non-orthologous sequence - C.neoformans:438 T.rubrum:438

Q5KLL0              	100.00%		F2SQV1              	100.00%
Bootstrap support for Q5KLL0 as seed ortholog is 100%.
Bootstrap support for F2SQV1 as seed ortholog is 100%.

Group of orthologs #680. Best score 438 bits
Score difference with first non-orthologous sequence - C.neoformans:438 T.rubrum:438

Q5KGQ3              	100.00%		F2SZA1              	100.00%
Bootstrap support for Q5KGQ3 as seed ortholog is 100%.
Bootstrap support for F2SZA1 as seed ortholog is 100%.

Group of orthologs #681. Best score 437 bits
Score difference with first non-orthologous sequence - C.neoformans:437 T.rubrum:437

Q5KN58              	100.00%		F2SXN1              	100.00%
Bootstrap support for Q5KN58 as seed ortholog is 100%.
Bootstrap support for F2SXN1 as seed ortholog is 100%.

Group of orthologs #682. Best score 436 bits
Score difference with first non-orthologous sequence - C.neoformans:436 T.rubrum:436

Q5KHA6              	100.00%		F2SCC5              	100.00%
Bootstrap support for Q5KHA6 as seed ortholog is 100%.
Bootstrap support for F2SCC5 as seed ortholog is 100%.

Group of orthologs #683. Best score 436 bits
Score difference with first non-orthologous sequence - C.neoformans:436 T.rubrum:436

Q5KNA1              	100.00%		F2SF88              	100.00%
Bootstrap support for Q5KNA1 as seed ortholog is 100%.
Bootstrap support for F2SF88 as seed ortholog is 100%.

Group of orthologs #684. Best score 436 bits
Score difference with first non-orthologous sequence - C.neoformans:436 T.rubrum:173

Q5KJ62              	100.00%		F2SNU5              	100.00%
Bootstrap support for Q5KJ62 as seed ortholog is 100%.
Bootstrap support for F2SNU5 as seed ortholog is 99%.

Group of orthologs #685. Best score 436 bits
Score difference with first non-orthologous sequence - C.neoformans:436 T.rubrum:436

Q5KJY4              	100.00%		F2T0S6              	100.00%
Bootstrap support for Q5KJY4 as seed ortholog is 100%.
Bootstrap support for F2T0S6 as seed ortholog is 100%.

Group of orthologs #686. Best score 435 bits
Score difference with first non-orthologous sequence - C.neoformans:435 T.rubrum:435

P0CO58              	100.00%		F2SH99              	100.00%
Bootstrap support for P0CO58 as seed ortholog is 100%.
Bootstrap support for F2SH99 as seed ortholog is 100%.

Group of orthologs #687. Best score 435 bits
Score difference with first non-orthologous sequence - C.neoformans:435 T.rubrum:67

Q5KAP7              	100.00%		F2SFE0              	100.00%
Bootstrap support for Q5KAP7 as seed ortholog is 100%.
Bootstrap support for F2SFE0 as seed ortholog is 91%.

Group of orthologs #688. Best score 435 bits
Score difference with first non-orthologous sequence - C.neoformans:435 T.rubrum:435

Q5KBM5              	100.00%		F2SFT3              	100.00%
Bootstrap support for Q5KBM5 as seed ortholog is 100%.
Bootstrap support for F2SFT3 as seed ortholog is 100%.

Group of orthologs #689. Best score 435 bits
Score difference with first non-orthologous sequence - C.neoformans:435 T.rubrum:435

Q5KGD3              	100.00%		F2SL51              	100.00%
Bootstrap support for Q5KGD3 as seed ortholog is 100%.
Bootstrap support for F2SL51 as seed ortholog is 100%.

Group of orthologs #690. Best score 435 bits
Score difference with first non-orthologous sequence - C.neoformans:435 T.rubrum:435

Q5KFS1              	100.00%		F2T0E3              	100.00%
Bootstrap support for Q5KFS1 as seed ortholog is 100%.
Bootstrap support for F2T0E3 as seed ortholog is 100%.

Group of orthologs #691. Best score 435 bits
Score difference with first non-orthologous sequence - C.neoformans:294 T.rubrum:327

Q5KNQ9              	100.00%		F2SVY2              	100.00%
Bootstrap support for Q5KNQ9 as seed ortholog is 100%.
Bootstrap support for F2SVY2 as seed ortholog is 100%.

Group of orthologs #692. Best score 434 bits
Score difference with first non-orthologous sequence - C.neoformans:434 T.rubrum:434

Q5KCX7              	100.00%		F2SUR4              	100.00%
                    	       		F2SRA8              	16.58%
Bootstrap support for Q5KCX7 as seed ortholog is 100%.
Bootstrap support for F2SUR4 as seed ortholog is 100%.

Group of orthologs #693. Best score 434 bits
Score difference with first non-orthologous sequence - C.neoformans:434 T.rubrum:434

Q5K7E1              	100.00%		F2SS81              	100.00%
Bootstrap support for Q5K7E1 as seed ortholog is 100%.
Bootstrap support for F2SS81 as seed ortholog is 100%.

Group of orthologs #694. Best score 434 bits
Score difference with first non-orthologous sequence - C.neoformans:434 T.rubrum:434

Q5KLQ5              	100.00%		F2SL24              	100.00%
Bootstrap support for Q5KLQ5 as seed ortholog is 100%.
Bootstrap support for F2SL24 as seed ortholog is 100%.

Group of orthologs #695. Best score 433 bits
Score difference with first non-orthologous sequence - C.neoformans:433 T.rubrum:187

Q5KAT0              	100.00%		F2SN26              	100.00%
Bootstrap support for Q5KAT0 as seed ortholog is 100%.
Bootstrap support for F2SN26 as seed ortholog is 99%.

Group of orthologs #696. Best score 433 bits
Score difference with first non-orthologous sequence - C.neoformans:433 T.rubrum:433

Q5KP39              	100.00%		F2SEA4              	100.00%
Bootstrap support for Q5KP39 as seed ortholog is 100%.
Bootstrap support for F2SEA4 as seed ortholog is 100%.

Group of orthologs #697. Best score 433 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubrum:196

Q5KPG5              	100.00%		F2SYL8              	100.00%
Bootstrap support for Q5KPG5 as seed ortholog is 99%.
Bootstrap support for F2SYL8 as seed ortholog is 99%.

Group of orthologs #698. Best score 432 bits
Score difference with first non-orthologous sequence - C.neoformans:363 T.rubrum:71

Q5KE51              	100.00%		F2SL38              	100.00%
                    	       		F2SEJ3              	10.17%
Bootstrap support for Q5KE51 as seed ortholog is 100%.
Bootstrap support for F2SL38 as seed ortholog is 95%.

Group of orthologs #699. Best score 432 bits
Score difference with first non-orthologous sequence - C.neoformans:432 T.rubrum:432

Q5KAF2              	100.00%		F2SNJ7              	100.00%
Bootstrap support for Q5KAF2 as seed ortholog is 100%.
Bootstrap support for F2SNJ7 as seed ortholog is 100%.

Group of orthologs #700. Best score 432 bits
Score difference with first non-orthologous sequence - C.neoformans:71 T.rubrum:165

Q5KMP4              	100.00%		F2SJS5              	100.00%
Bootstrap support for Q5KMP4 as seed ortholog is 99%.
Bootstrap support for F2SJS5 as seed ortholog is 99%.

Group of orthologs #701. Best score 431 bits
Score difference with first non-orthologous sequence - C.neoformans:15 T.rubrum:146

Q5K9W4              	100.00%		F2SZB3              	100.00%
Q5KAC4              	45.41%		
Q5K7U4              	41.84%		
Bootstrap support for Q5K9W4 as seed ortholog is 65%.
Alternative seed ortholog is Q5KNV1 (15 bits away from this cluster)
Bootstrap support for F2SZB3 as seed ortholog is 99%.

Group of orthologs #702. Best score 431 bits
Score difference with first non-orthologous sequence - C.neoformans:431 T.rubrum:431

Q5KPN7              	100.00%		F2SWA7              	100.00%
Bootstrap support for Q5KPN7 as seed ortholog is 100%.
Bootstrap support for F2SWA7 as seed ortholog is 100%.

Group of orthologs #703. Best score 430 bits
Score difference with first non-orthologous sequence - C.neoformans:430 T.rubrum:430

Q5KDL9              	100.00%		F2SLY8              	100.00%
Bootstrap support for Q5KDL9 as seed ortholog is 100%.
Bootstrap support for F2SLY8 as seed ortholog is 100%.

Group of orthologs #704. Best score 430 bits
Score difference with first non-orthologous sequence - C.neoformans:430 T.rubrum:274

Q5KMN8              	100.00%		F2SFJ8              	100.00%
Bootstrap support for Q5KMN8 as seed ortholog is 100%.
Bootstrap support for F2SFJ8 as seed ortholog is 99%.

Group of orthologs #705. Best score 430 bits
Score difference with first non-orthologous sequence - C.neoformans:430 T.rubrum:430

Q5KHT1              	100.00%		F2SXN0              	100.00%
Bootstrap support for Q5KHT1 as seed ortholog is 100%.
Bootstrap support for F2SXN0 as seed ortholog is 100%.

Group of orthologs #706. Best score 429 bits
Score difference with first non-orthologous sequence - C.neoformans:429 T.rubrum:246

Q5K7H5              	100.00%		F2SZV1              	100.00%
Q5KAX9              	38.00%		
Q5KJQ6              	28.52%		
Bootstrap support for Q5K7H5 as seed ortholog is 100%.
Bootstrap support for F2SZV1 as seed ortholog is 99%.

Group of orthologs #707. Best score 429 bits
Score difference with first non-orthologous sequence - C.neoformans:429 T.rubrum:429

Q5KFZ3              	100.00%		F2SXD2              	100.00%
Bootstrap support for Q5KFZ3 as seed ortholog is 100%.
Bootstrap support for F2SXD2 as seed ortholog is 100%.

Group of orthologs #708. Best score 428 bits
Score difference with first non-orthologous sequence - C.neoformans:428 T.rubrum:428

Q5KAH7              	100.00%		F2SJP0              	100.00%
                    	       		F2SQE6              	52.09%
                    	       		F2SN12              	51.63%
                    	       		F2SG90              	46.00%
                    	       		F2SIX9              	37.88%
Bootstrap support for Q5KAH7 as seed ortholog is 100%.
Bootstrap support for F2SJP0 as seed ortholog is 100%.

Group of orthologs #709. Best score 428 bits
Score difference with first non-orthologous sequence - C.neoformans:428 T.rubrum:428

Q5KEW6              	100.00%		F2SDP1              	100.00%
Bootstrap support for Q5KEW6 as seed ortholog is 100%.
Bootstrap support for F2SDP1 as seed ortholog is 100%.

Group of orthologs #710. Best score 428 bits
Score difference with first non-orthologous sequence - C.neoformans:428 T.rubrum:428

P0CO28              	100.00%		F2SMP3              	100.00%
Bootstrap support for P0CO28 as seed ortholog is 100%.
Bootstrap support for F2SMP3 as seed ortholog is 100%.

Group of orthologs #711. Best score 428 bits
Score difference with first non-orthologous sequence - C.neoformans:428 T.rubrum:428

P0CS70              	100.00%		F2SQC6              	100.00%
Bootstrap support for P0CS70 as seed ortholog is 100%.
Bootstrap support for F2SQC6 as seed ortholog is 100%.

Group of orthologs #712. Best score 428 bits
Score difference with first non-orthologous sequence - C.neoformans:288 T.rubrum:428

Q5KLZ4              	100.00%		F2SET5              	100.00%
Bootstrap support for Q5KLZ4 as seed ortholog is 100%.
Bootstrap support for F2SET5 as seed ortholog is 100%.

Group of orthologs #713. Best score 427 bits
Score difference with first non-orthologous sequence - C.neoformans:115 T.rubrum:122

Q5K8T4              	100.00%		F2SSL0              	100.00%
Bootstrap support for Q5K8T4 as seed ortholog is 98%.
Bootstrap support for F2SSL0 as seed ortholog is 99%.

Group of orthologs #714. Best score 427 bits
Score difference with first non-orthologous sequence - C.neoformans:427 T.rubrum:427

P0CP58              	100.00%		F2SWJ1              	100.00%
Bootstrap support for P0CP58 as seed ortholog is 100%.
Bootstrap support for F2SWJ1 as seed ortholog is 100%.

Group of orthologs #715. Best score 427 bits
Score difference with first non-orthologous sequence - C.neoformans:427 T.rubrum:427

Q5KFJ6              	100.00%		F2SU79              	100.00%
Bootstrap support for Q5KFJ6 as seed ortholog is 100%.
Bootstrap support for F2SU79 as seed ortholog is 100%.

Group of orthologs #716. Best score 427 bits
Score difference with first non-orthologous sequence - C.neoformans:427 T.rubrum:427

Q5KFB7              	100.00%		F2SUX5              	100.00%
Bootstrap support for Q5KFB7 as seed ortholog is 100%.
Bootstrap support for F2SUX5 as seed ortholog is 100%.

Group of orthologs #717. Best score 427 bits
Score difference with first non-orthologous sequence - C.neoformans:427 T.rubrum:427

Q5KGA8              	100.00%		F2SXL1              	100.00%
Bootstrap support for Q5KGA8 as seed ortholog is 100%.
Bootstrap support for F2SXL1 as seed ortholog is 100%.

Group of orthologs #718. Best score 426 bits
Score difference with first non-orthologous sequence - C.neoformans:426 T.rubrum:426

Q5K8P2              	100.00%		F2SPG3              	100.00%
Bootstrap support for Q5K8P2 as seed ortholog is 100%.
Bootstrap support for F2SPG3 as seed ortholog is 100%.

Group of orthologs #719. Best score 426 bits
Score difference with first non-orthologous sequence - C.neoformans:426 T.rubrum:426

P0CN28              	100.00%		F2SX15              	100.00%
Bootstrap support for P0CN28 as seed ortholog is 100%.
Bootstrap support for F2SX15 as seed ortholog is 100%.

Group of orthologs #720. Best score 426 bits
Score difference with first non-orthologous sequence - C.neoformans:426 T.rubrum:426

P0CP90              	100.00%		F2T113              	100.00%
Bootstrap support for P0CP90 as seed ortholog is 100%.
Bootstrap support for F2T113 as seed ortholog is 100%.

Group of orthologs #721. Best score 426 bits
Score difference with first non-orthologous sequence - C.neoformans:150 T.rubrum:146

Q5KLM5              	100.00%		F2SM80              	100.00%
Bootstrap support for Q5KLM5 as seed ortholog is 99%.
Bootstrap support for F2SM80 as seed ortholog is 99%.

Group of orthologs #722. Best score 426 bits
Score difference with first non-orthologous sequence - C.neoformans:426 T.rubrum:426

Q5KL48              	100.00%		F2SN89              	100.00%
Bootstrap support for Q5KL48 as seed ortholog is 100%.
Bootstrap support for F2SN89 as seed ortholog is 100%.

Group of orthologs #723. Best score 426 bits
Score difference with first non-orthologous sequence - C.neoformans:81 T.rubrum:11

Q5KCJ4              	100.00%		F2SYH6              	100.00%
Bootstrap support for Q5KCJ4 as seed ortholog is 97%.
Bootstrap support for F2SYH6 as seed ortholog is 61%.
Alternative seed ortholog is F2SVF1 (11 bits away from this cluster)

Group of orthologs #724. Best score 425 bits
Score difference with first non-orthologous sequence - C.neoformans:332 T.rubrum:299

Q5KB17              	100.00%		F2SE64              	100.00%
Bootstrap support for Q5KB17 as seed ortholog is 100%.
Bootstrap support for F2SE64 as seed ortholog is 100%.

Group of orthologs #725. Best score 425 bits
Score difference with first non-orthologous sequence - C.neoformans:425 T.rubrum:425

Q5K9Z1              	100.00%		F2SYZ7              	100.00%
Bootstrap support for Q5K9Z1 as seed ortholog is 100%.
Bootstrap support for F2SYZ7 as seed ortholog is 100%.

Group of orthologs #726. Best score 424 bits
Score difference with first non-orthologous sequence - C.neoformans:424 T.rubrum:424

Q5KHF9              	100.00%		F2T0R6              	100.00%
Bootstrap support for Q5KHF9 as seed ortholog is 100%.
Bootstrap support for F2T0R6 as seed ortholog is 100%.

Group of orthologs #727. Best score 423 bits
Score difference with first non-orthologous sequence - C.neoformans:423 T.rubrum:423

Q5KC43              	100.00%		F2SXA2              	100.00%
Q5K965              	23.17%		
Bootstrap support for Q5KC43 as seed ortholog is 100%.
Bootstrap support for F2SXA2 as seed ortholog is 100%.

Group of orthologs #728. Best score 423 bits
Score difference with first non-orthologous sequence - C.neoformans:423 T.rubrum:267

Q5KCL1              	100.00%		F2SJR1              	100.00%
Bootstrap support for Q5KCL1 as seed ortholog is 100%.
Bootstrap support for F2SJR1 as seed ortholog is 100%.

Group of orthologs #729. Best score 423 bits
Score difference with first non-orthologous sequence - C.neoformans:423 T.rubrum:147

Q5KNX1              	100.00%		F2SCR9              	100.00%
Bootstrap support for Q5KNX1 as seed ortholog is 100%.
Bootstrap support for F2SCR9 as seed ortholog is 99%.

Group of orthologs #730. Best score 423 bits
Score difference with first non-orthologous sequence - C.neoformans:423 T.rubrum:423

Q5K8Z2              	100.00%		F2STA9              	100.00%
Bootstrap support for Q5K8Z2 as seed ortholog is 100%.
Bootstrap support for F2STA9 as seed ortholog is 100%.

Group of orthologs #731. Best score 423 bits
Score difference with first non-orthologous sequence - C.neoformans:423 T.rubrum:423

Q5KA00              	100.00%		F2SWR3              	100.00%
Bootstrap support for Q5KA00 as seed ortholog is 100%.
Bootstrap support for F2SWR3 as seed ortholog is 100%.

Group of orthologs #732. Best score 423 bits
Score difference with first non-orthologous sequence - C.neoformans:423 T.rubrum:253

Q5KK64              	100.00%		F2SMK5              	100.00%
Bootstrap support for Q5KK64 as seed ortholog is 100%.
Bootstrap support for F2SMK5 as seed ortholog is 100%.

Group of orthologs #733. Best score 423 bits
Score difference with first non-orthologous sequence - C.neoformans:180 T.rubrum:423

Q5KNV3              	100.00%		F2SKD0              	100.00%
Bootstrap support for Q5KNV3 as seed ortholog is 99%.
Bootstrap support for F2SKD0 as seed ortholog is 100%.

Group of orthologs #734. Best score 423 bits
Score difference with first non-orthologous sequence - C.neoformans:105 T.rubrum:146

Q5KP84              	100.00%		F2SLF5              	100.00%
Bootstrap support for Q5KP84 as seed ortholog is 99%.
Bootstrap support for F2SLF5 as seed ortholog is 99%.

Group of orthologs #735. Best score 423 bits
Score difference with first non-orthologous sequence - C.neoformans:423 T.rubrum:423

Q5KKX3              	100.00%		F2SQR3              	100.00%
Bootstrap support for Q5KKX3 as seed ortholog is 100%.
Bootstrap support for F2SQR3 as seed ortholog is 100%.

Group of orthologs #736. Best score 423 bits
Score difference with first non-orthologous sequence - C.neoformans:423 T.rubrum:423

Q5KJ16              	100.00%		F2SVH2              	100.00%
Bootstrap support for Q5KJ16 as seed ortholog is 100%.
Bootstrap support for F2SVH2 as seed ortholog is 100%.

Group of orthologs #737. Best score 422 bits
Score difference with first non-orthologous sequence - C.neoformans:198 T.rubrum:43

Q5KJV0              	100.00%		F2SCZ3              	100.00%
Bootstrap support for Q5KJV0 as seed ortholog is 100%.
Bootstrap support for F2SCZ3 as seed ortholog is 88%.

Group of orthologs #738. Best score 422 bits
Score difference with first non-orthologous sequence - C.neoformans:422 T.rubrum:422

Q5K6V0              	100.00%		F2SZC0              	100.00%
Bootstrap support for Q5K6V0 as seed ortholog is 100%.
Bootstrap support for F2SZC0 as seed ortholog is 100%.

Group of orthologs #739. Best score 422 bits
Score difference with first non-orthologous sequence - C.neoformans:422 T.rubrum:422

Q5KMH4              	100.00%		F2SVT3              	100.00%
Bootstrap support for Q5KMH4 as seed ortholog is 100%.
Bootstrap support for F2SVT3 as seed ortholog is 100%.

Group of orthologs #740. Best score 421 bits
Score difference with first non-orthologous sequence - C.neoformans:421 T.rubrum:421

Q5KL44              	100.00%		F2SEI5              	100.00%
Bootstrap support for Q5KL44 as seed ortholog is 100%.
Bootstrap support for F2SEI5 as seed ortholog is 100%.

Group of orthologs #741. Best score 421 bits
Score difference with first non-orthologous sequence - C.neoformans:421 T.rubrum:421

Q5KI73              	100.00%		F2SIP7              	100.00%
Bootstrap support for Q5KI73 as seed ortholog is 100%.
Bootstrap support for F2SIP7 as seed ortholog is 100%.

Group of orthologs #742. Best score 420 bits
Score difference with first non-orthologous sequence - C.neoformans:420 T.rubrum:420

P0CM24              	100.00%		F2SE96              	100.00%
Bootstrap support for P0CM24 as seed ortholog is 100%.
Bootstrap support for F2SE96 as seed ortholog is 100%.

Group of orthologs #743. Best score 420 bits
Score difference with first non-orthologous sequence - C.neoformans:420 T.rubrum:420

Q5KMP0              	100.00%		F2SJE2              	100.00%
Bootstrap support for Q5KMP0 as seed ortholog is 100%.
Bootstrap support for F2SJE2 as seed ortholog is 100%.

Group of orthologs #744. Best score 419 bits
Score difference with first non-orthologous sequence - C.neoformans:419 T.rubrum:419

Q5KIJ9              	100.00%		F2SP29              	100.00%
Bootstrap support for Q5KIJ9 as seed ortholog is 100%.
Bootstrap support for F2SP29 as seed ortholog is 100%.

Group of orthologs #745. Best score 419 bits
Score difference with first non-orthologous sequence - C.neoformans:338 T.rubrum:419

Q5KLS1              	100.00%		F2STV1              	100.00%
Bootstrap support for Q5KLS1 as seed ortholog is 100%.
Bootstrap support for F2STV1 as seed ortholog is 100%.

Group of orthologs #746. Best score 419 bits
Score difference with first non-orthologous sequence - C.neoformans:419 T.rubrum:419

Q5KF31              	100.00%		F2T117              	100.00%
Bootstrap support for Q5KF31 as seed ortholog is 100%.
Bootstrap support for F2T117 as seed ortholog is 100%.

Group of orthologs #747. Best score 418 bits
Score difference with first non-orthologous sequence - C.neoformans:418 T.rubrum:418

Q5K8J3              	100.00%		F2SLC4              	100.00%
Bootstrap support for Q5K8J3 as seed ortholog is 100%.
Bootstrap support for F2SLC4 as seed ortholog is 100%.

Group of orthologs #748. Best score 417 bits
Score difference with first non-orthologous sequence - C.neoformans:15 T.rubrum:209

Q5K6S8              	100.00%		F2SQG3              	100.00%
Q5KCC5              	82.32%		
Q5KA16              	81.16%		
Bootstrap support for Q5K6S8 as seed ortholog is 61%.
Alternative seed ortholog is Q5KMZ2 (15 bits away from this cluster)
Bootstrap support for F2SQG3 as seed ortholog is 100%.

Group of orthologs #749. Best score 417 bits
Score difference with first non-orthologous sequence - C.neoformans:417 T.rubrum:217

Q5KG79              	100.00%		F2SH23              	100.00%
Bootstrap support for Q5KG79 as seed ortholog is 100%.
Bootstrap support for F2SH23 as seed ortholog is 99%.

Group of orthologs #750. Best score 417 bits
Score difference with first non-orthologous sequence - C.neoformans:417 T.rubrum:417

Q5KHZ5              	100.00%		F2SQV7              	100.00%
Bootstrap support for Q5KHZ5 as seed ortholog is 100%.
Bootstrap support for F2SQV7 as seed ortholog is 100%.

Group of orthologs #751. Best score 416 bits
Score difference with first non-orthologous sequence - C.neoformans:416 T.rubrum:416

Q5KHS2              	100.00%		F2SCC1              	100.00%
Bootstrap support for Q5KHS2 as seed ortholog is 100%.
Bootstrap support for F2SCC1 as seed ortholog is 100%.

Group of orthologs #752. Best score 416 bits
Score difference with first non-orthologous sequence - C.neoformans:319 T.rubrum:416

Q5KEQ4              	100.00%		F2SIH0              	100.00%
Bootstrap support for Q5KEQ4 as seed ortholog is 100%.
Bootstrap support for F2SIH0 as seed ortholog is 100%.

Group of orthologs #753. Best score 416 bits
Score difference with first non-orthologous sequence - C.neoformans:416 T.rubrum:416

Q5KKZ9              	100.00%		F2SGV6              	100.00%
Bootstrap support for Q5KKZ9 as seed ortholog is 100%.
Bootstrap support for F2SGV6 as seed ortholog is 100%.

Group of orthologs #754. Best score 416 bits
Score difference with first non-orthologous sequence - C.neoformans:416 T.rubrum:416

Q5KK35              	100.00%		F2SJZ7              	100.00%
Bootstrap support for Q5KK35 as seed ortholog is 100%.
Bootstrap support for F2SJZ7 as seed ortholog is 100%.

Group of orthologs #755. Best score 416 bits
Score difference with first non-orthologous sequence - C.neoformans:374 T.rubrum:416

Q5KDF2              	100.00%		F2SWS7              	100.00%
Bootstrap support for Q5KDF2 as seed ortholog is 100%.
Bootstrap support for F2SWS7 as seed ortholog is 100%.

Group of orthologs #756. Best score 416 bits
Score difference with first non-orthologous sequence - C.neoformans:416 T.rubrum:87

Q5KG46              	100.00%		F2SV79              	100.00%
Bootstrap support for Q5KG46 as seed ortholog is 100%.
Bootstrap support for F2SV79 as seed ortholog is 94%.

Group of orthologs #757. Best score 416 bits
Score difference with first non-orthologous sequence - C.neoformans:416 T.rubrum:416

Q5KG73              	100.00%		F2SV80              	100.00%
Bootstrap support for Q5KG73 as seed ortholog is 100%.
Bootstrap support for F2SV80 as seed ortholog is 100%.

Group of orthologs #758. Best score 416 bits
Score difference with first non-orthologous sequence - C.neoformans:416 T.rubrum:416

Q5KNU1              	100.00%		F2SZR4              	100.00%
Bootstrap support for Q5KNU1 as seed ortholog is 100%.
Bootstrap support for F2SZR4 as seed ortholog is 100%.

Group of orthologs #759. Best score 415 bits
Score difference with first non-orthologous sequence - C.neoformans:268 T.rubrum:319

P0CR08              	100.00%		F2SEB4              	100.00%
Bootstrap support for P0CR08 as seed ortholog is 99%.
Bootstrap support for F2SEB4 as seed ortholog is 100%.

Group of orthologs #760. Best score 415 bits
Score difference with first non-orthologous sequence - C.neoformans:415 T.rubrum:415

P0CN08              	100.00%		F2SV37              	100.00%
Bootstrap support for P0CN08 as seed ortholog is 100%.
Bootstrap support for F2SV37 as seed ortholog is 100%.

Group of orthologs #761. Best score 415 bits
Score difference with first non-orthologous sequence - C.neoformans:415 T.rubrum:415

Q5K8M4              	100.00%		F2SXS3              	100.00%
Bootstrap support for Q5K8M4 as seed ortholog is 100%.
Bootstrap support for F2SXS3 as seed ortholog is 100%.

Group of orthologs #762. Best score 415 bits
Score difference with first non-orthologous sequence - C.neoformans:415 T.rubrum:415

Q5KN95              	100.00%		F2ST95              	100.00%
Bootstrap support for Q5KN95 as seed ortholog is 100%.
Bootstrap support for F2ST95 as seed ortholog is 100%.

Group of orthologs #763. Best score 414 bits
Score difference with first non-orthologous sequence - C.neoformans:414 T.rubrum:414

P0CR16              	100.00%		F2STH1              	100.00%
Bootstrap support for P0CR16 as seed ortholog is 100%.
Bootstrap support for F2STH1 as seed ortholog is 100%.

Group of orthologs #764. Best score 414 bits
Score difference with first non-orthologous sequence - C.neoformans:281 T.rubrum:103

Q5KKE4              	100.00%		F2SI98              	100.00%
Bootstrap support for Q5KKE4 as seed ortholog is 100%.
Bootstrap support for F2SI98 as seed ortholog is 99%.

Group of orthologs #765. Best score 414 bits
Score difference with first non-orthologous sequence - C.neoformans:414 T.rubrum:414

Q5KBK3              	100.00%		F2SSW6              	100.00%
Bootstrap support for Q5KBK3 as seed ortholog is 100%.
Bootstrap support for F2SSW6 as seed ortholog is 100%.

Group of orthologs #766. Best score 414 bits
Score difference with first non-orthologous sequence - C.neoformans:414 T.rubrum:414

Q5KKQ4              	100.00%		F2SYX0              	100.00%
Bootstrap support for Q5KKQ4 as seed ortholog is 100%.
Bootstrap support for F2SYX0 as seed ortholog is 100%.

Group of orthologs #767. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:413 T.rubrum:413

Q5KAH5              	100.00%		F2SGF0              	100.00%
Bootstrap support for Q5KAH5 as seed ortholog is 100%.
Bootstrap support for F2SGF0 as seed ortholog is 100%.

Group of orthologs #768. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:413 T.rubrum:413

Q5KAU7              	100.00%		F2SZJ6              	100.00%
Bootstrap support for Q5KAU7 as seed ortholog is 100%.
Bootstrap support for F2SZJ6 as seed ortholog is 100%.

Group of orthologs #769. Best score 413 bits
Score difference with first non-orthologous sequence - C.neoformans:283 T.rubrum:248

Q5KP35              	100.00%		F2SMY1              	100.00%
Bootstrap support for Q5KP35 as seed ortholog is 100%.
Bootstrap support for F2SMY1 as seed ortholog is 100%.

Group of orthologs #770. Best score 412 bits
Score difference with first non-orthologous sequence - C.neoformans:412 T.rubrum:412

Q5KLY7              	100.00%		F2SI62              	100.00%
                    	       		F2SJZ0              	14.38%
Bootstrap support for Q5KLY7 as seed ortholog is 100%.
Bootstrap support for F2SI62 as seed ortholog is 100%.

Group of orthologs #771. Best score 412 bits
Score difference with first non-orthologous sequence - C.neoformans:142 T.rubrum:412

Q5KIT1              	100.00%		F2SDC1              	100.00%
Bootstrap support for Q5KIT1 as seed ortholog is 99%.
Bootstrap support for F2SDC1 as seed ortholog is 100%.

Group of orthologs #772. Best score 411 bits
Score difference with first non-orthologous sequence - C.neoformans:156 T.rubrum:310

Q5KD75              	100.00%		F2SN61              	100.00%
Bootstrap support for Q5KD75 as seed ortholog is 99%.
Bootstrap support for F2SN61 as seed ortholog is 100%.

Group of orthologs #773. Best score 410 bits
Score difference with first non-orthologous sequence - C.neoformans:410 T.rubrum:284

Q5KM29              	100.00%		F2SEM5              	100.00%
Bootstrap support for Q5KM29 as seed ortholog is 100%.
Bootstrap support for F2SEM5 as seed ortholog is 100%.

Group of orthologs #774. Best score 410 bits
Score difference with first non-orthologous sequence - C.neoformans:410 T.rubrum:410

P0CP20              	100.00%		F2SWK1              	100.00%
Bootstrap support for P0CP20 as seed ortholog is 100%.
Bootstrap support for F2SWK1 as seed ortholog is 100%.

Group of orthologs #775. Best score 410 bits
Score difference with first non-orthologous sequence - C.neoformans:410 T.rubrum:410

Q5KFH8              	100.00%		F2STB9              	100.00%
Bootstrap support for Q5KFH8 as seed ortholog is 100%.
Bootstrap support for F2STB9 as seed ortholog is 100%.

Group of orthologs #776. Best score 410 bits
Score difference with first non-orthologous sequence - C.neoformans:410 T.rubrum:410

Q5KPS9              	100.00%		F2SK28              	100.00%
Bootstrap support for Q5KPS9 as seed ortholog is 100%.
Bootstrap support for F2SK28 as seed ortholog is 100%.

Group of orthologs #777. Best score 409 bits
Score difference with first non-orthologous sequence - C.neoformans:409 T.rubrum:409

Q5KHP6              	100.00%		F2SPQ9              	100.00%
Bootstrap support for Q5KHP6 as seed ortholog is 100%.
Bootstrap support for F2SPQ9 as seed ortholog is 100%.

Group of orthologs #778. Best score 409 bits
Score difference with first non-orthologous sequence - C.neoformans:244 T.rubrum:367

Q5KP37              	100.00%		F2SZW4              	100.00%
Bootstrap support for Q5KP37 as seed ortholog is 100%.
Bootstrap support for F2SZW4 as seed ortholog is 100%.

Group of orthologs #779. Best score 408 bits
Score difference with first non-orthologous sequence - C.neoformans:408 T.rubrum:408

Q5KA97              	100.00%		F2SNB4              	100.00%
Bootstrap support for Q5KA97 as seed ortholog is 100%.
Bootstrap support for F2SNB4 as seed ortholog is 100%.

Group of orthologs #780. Best score 408 bits
Score difference with first non-orthologous sequence - C.neoformans:327 T.rubrum:13

Q5KDT3              	100.00%		F2SY67              	100.00%
Bootstrap support for Q5KDT3 as seed ortholog is 100%.
Bootstrap support for F2SY67 as seed ortholog is 64%.
Alternative seed ortholog is F2SNT2 (13 bits away from this cluster)

Group of orthologs #781. Best score 407 bits
Score difference with first non-orthologous sequence - C.neoformans:407 T.rubrum:407

Q5K6X7              	100.00%		F2SRQ5              	100.00%
Bootstrap support for Q5K6X7 as seed ortholog is 100%.
Bootstrap support for F2SRQ5 as seed ortholog is 100%.

Group of orthologs #782. Best score 407 bits
Score difference with first non-orthologous sequence - C.neoformans:407 T.rubrum:407

Q5KD50              	100.00%		F2SM90              	100.00%
Bootstrap support for Q5KD50 as seed ortholog is 100%.
Bootstrap support for F2SM90 as seed ortholog is 100%.

Group of orthologs #783. Best score 407 bits
Score difference with first non-orthologous sequence - C.neoformans:407 T.rubrum:407

Q5KJJ1              	100.00%		F2SJN6              	100.00%
Bootstrap support for Q5KJJ1 as seed ortholog is 100%.
Bootstrap support for F2SJN6 as seed ortholog is 100%.

Group of orthologs #784. Best score 407 bits
Score difference with first non-orthologous sequence - C.neoformans:407 T.rubrum:407

Q5KNG3              	100.00%		F2SN49              	100.00%
Bootstrap support for Q5KNG3 as seed ortholog is 100%.
Bootstrap support for F2SN49 as seed ortholog is 100%.

Group of orthologs #785. Best score 407 bits
Score difference with first non-orthologous sequence - C.neoformans:407 T.rubrum:95

Q5KM27              	100.00%		F2SQZ0              	100.00%
Bootstrap support for Q5KM27 as seed ortholog is 100%.
Bootstrap support for F2SQZ0 as seed ortholog is 99%.

Group of orthologs #786. Best score 407 bits
Score difference with first non-orthologous sequence - C.neoformans:407 T.rubrum:407

Q5KHU9              	100.00%		F2SXU2              	100.00%
Bootstrap support for Q5KHU9 as seed ortholog is 100%.
Bootstrap support for F2SXU2 as seed ortholog is 100%.

Group of orthologs #787. Best score 407 bits
Score difference with first non-orthologous sequence - C.neoformans:306 T.rubrum:321

Q5KNG0              	100.00%		F2T051              	100.00%
Bootstrap support for Q5KNG0 as seed ortholog is 100%.
Bootstrap support for F2T051 as seed ortholog is 100%.

Group of orthologs #788. Best score 406 bits
Score difference with first non-orthologous sequence - C.neoformans:250 T.rubrum:266

Q5KKV1              	100.00%		F2SL14              	100.00%
Bootstrap support for Q5KKV1 as seed ortholog is 100%.
Bootstrap support for F2SL14 as seed ortholog is 100%.

Group of orthologs #789. Best score 406 bits
Score difference with first non-orthologous sequence - C.neoformans:271 T.rubrum:309

Q5KGS0              	100.00%		F2SRZ5              	100.00%
Bootstrap support for Q5KGS0 as seed ortholog is 100%.
Bootstrap support for F2SRZ5 as seed ortholog is 100%.

Group of orthologs #790. Best score 405 bits
Score difference with first non-orthologous sequence - C.neoformans:405 T.rubrum:405

Q5KBM8              	100.00%		F2SNE3              	100.00%
Bootstrap support for Q5KBM8 as seed ortholog is 100%.
Bootstrap support for F2SNE3 as seed ortholog is 100%.

Group of orthologs #791. Best score 405 bits
Score difference with first non-orthologous sequence - C.neoformans:405 T.rubrum:405

Q5KIS9              	100.00%		F2SHB8              	100.00%
Bootstrap support for Q5KIS9 as seed ortholog is 100%.
Bootstrap support for F2SHB8 as seed ortholog is 100%.

Group of orthologs #792. Best score 405 bits
Score difference with first non-orthologous sequence - C.neoformans:52 T.rubrum:84

Q5KDX8              	100.00%		F2SX86              	100.00%
Bootstrap support for Q5KDX8 as seed ortholog is 94%.
Bootstrap support for F2SX86 as seed ortholog is 99%.

Group of orthologs #793. Best score 404 bits
Score difference with first non-orthologous sequence - C.neoformans:283 T.rubrum:244

Q5KJ56              	100.00%		F2SIM5              	100.00%
Q5KIU5              	73.07%		F2SE80              	8.70%
Q5KJP9              	55.07%		
Bootstrap support for Q5KJ56 as seed ortholog is 100%.
Bootstrap support for F2SIM5 as seed ortholog is 100%.

Group of orthologs #794. Best score 404 bits
Score difference with first non-orthologous sequence - C.neoformans:404 T.rubrum:404

Q5K879              	100.00%		F2SCK6              	100.00%
Bootstrap support for Q5K879 as seed ortholog is 100%.
Bootstrap support for F2SCK6 as seed ortholog is 100%.

Group of orthologs #795. Best score 404 bits
Score difference with first non-orthologous sequence - C.neoformans:404 T.rubrum:404

Q5KCX9              	100.00%		F2SFV4              	100.00%
Bootstrap support for Q5KCX9 as seed ortholog is 100%.
Bootstrap support for F2SFV4 as seed ortholog is 100%.

Group of orthologs #796. Best score 404 bits
Score difference with first non-orthologous sequence - C.neoformans:404 T.rubrum:404

Q5KME9              	100.00%		F2SKC6              	100.00%
Bootstrap support for Q5KME9 as seed ortholog is 100%.
Bootstrap support for F2SKC6 as seed ortholog is 100%.

Group of orthologs #797. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:403 T.rubrum:283

Q5K7U5              	100.00%		F2SM57              	100.00%
Bootstrap support for Q5K7U5 as seed ortholog is 100%.
Bootstrap support for F2SM57 as seed ortholog is 99%.

Group of orthologs #798. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:343 T.rubrum:344

P0CS36              	100.00%		F2SNL0              	100.00%
Bootstrap support for P0CS36 as seed ortholog is 100%.
Bootstrap support for F2SNL0 as seed ortholog is 100%.

Group of orthologs #799. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:48 T.rubrum:403

Q5KEW8              	100.00%		F2SPG1              	100.00%
Bootstrap support for Q5KEW8 as seed ortholog is 92%.
Bootstrap support for F2SPG1 as seed ortholog is 100%.

Group of orthologs #800. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:403 T.rubrum:403

P0CO20              	100.00%		F2SXH4              	100.00%
Bootstrap support for P0CO20 as seed ortholog is 100%.
Bootstrap support for F2SXH4 as seed ortholog is 100%.

Group of orthologs #801. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:403 T.rubrum:319

Q5KJ20              	100.00%		F2SSG4              	100.00%
Bootstrap support for Q5KJ20 as seed ortholog is 100%.
Bootstrap support for F2SSG4 as seed ortholog is 100%.

Group of orthologs #802. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:403 T.rubrum:403

Q5KKE2              	100.00%		F2SUJ7              	100.00%
Bootstrap support for Q5KKE2 as seed ortholog is 100%.
Bootstrap support for F2SUJ7 as seed ortholog is 100%.

Group of orthologs #803. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:403 T.rubrum:403

Q5KG83              	100.00%		F2SYT4              	100.00%
Bootstrap support for Q5KG83 as seed ortholog is 100%.
Bootstrap support for F2SYT4 as seed ortholog is 100%.

Group of orthologs #804. Best score 403 bits
Score difference with first non-orthologous sequence - C.neoformans:403 T.rubrum:403

Q5KIN5              	100.00%		F2T079              	100.00%
Bootstrap support for Q5KIN5 as seed ortholog is 100%.
Bootstrap support for F2T079 as seed ortholog is 100%.

Group of orthologs #805. Best score 402 bits
Score difference with first non-orthologous sequence - C.neoformans:402 T.rubrum:402

Q5K9K2              	100.00%		F2SHD6              	100.00%
Bootstrap support for Q5K9K2 as seed ortholog is 100%.
Bootstrap support for F2SHD6 as seed ortholog is 100%.

Group of orthologs #806. Best score 402 bits
Score difference with first non-orthologous sequence - C.neoformans:402 T.rubrum:402

Q5KMT6              	100.00%		F2SKE6              	100.00%
Bootstrap support for Q5KMT6 as seed ortholog is 100%.
Bootstrap support for F2SKE6 as seed ortholog is 100%.

Group of orthologs #807. Best score 402 bits
Score difference with first non-orthologous sequence - C.neoformans:250 T.rubrum:402

Q5KI84              	100.00%		F2STM1              	100.00%
Bootstrap support for Q5KI84 as seed ortholog is 100%.
Bootstrap support for F2STM1 as seed ortholog is 100%.

Group of orthologs #808. Best score 402 bits
Score difference with first non-orthologous sequence - C.neoformans:402 T.rubrum:402

Q5KEK5              	100.00%		F2T0S8              	100.00%
Bootstrap support for Q5KEK5 as seed ortholog is 100%.
Bootstrap support for F2T0S8 as seed ortholog is 100%.

Group of orthologs #809. Best score 401 bits
Score difference with first non-orthologous sequence - C.neoformans:72 T.rubrum:401

Q5KHK4              	100.00%		F2SLR4              	100.00%
Q5KHK7              	55.56%		
Q5KJ60              	25.93%		
Q5KJ75              	24.73%		
Q5K821              	21.62%		
Bootstrap support for Q5KHK4 as seed ortholog is 90%.
Bootstrap support for F2SLR4 as seed ortholog is 100%.

Group of orthologs #810. Best score 401 bits
Score difference with first non-orthologous sequence - C.neoformans:401 T.rubrum:401

P0CP34              	100.00%		F2SF38              	100.00%
Bootstrap support for P0CP34 as seed ortholog is 100%.
Bootstrap support for F2SF38 as seed ortholog is 100%.

Group of orthologs #811. Best score 401 bits
Score difference with first non-orthologous sequence - C.neoformans:401 T.rubrum:401

Q5KF32              	100.00%		F2SPT7              	100.00%
Bootstrap support for Q5KF32 as seed ortholog is 100%.
Bootstrap support for F2SPT7 as seed ortholog is 100%.

Group of orthologs #812. Best score 400 bits
Score difference with first non-orthologous sequence - C.neoformans:263 T.rubrum:233

P0CQ86              	100.00%		F2SCG8              	100.00%
Bootstrap support for P0CQ86 as seed ortholog is 100%.
Bootstrap support for F2SCG8 as seed ortholog is 100%.

Group of orthologs #813. Best score 400 bits
Score difference with first non-orthologous sequence - C.neoformans:400 T.rubrum:400

P0CO44              	100.00%		F2SFF5              	100.00%
Bootstrap support for P0CO44 as seed ortholog is 100%.
Bootstrap support for F2SFF5 as seed ortholog is 100%.

Group of orthologs #814. Best score 400 bits
Score difference with first non-orthologous sequence - C.neoformans:400 T.rubrum:42

Q5K8Z6              	100.00%		F2SW98              	100.00%
Bootstrap support for Q5K8Z6 as seed ortholog is 100%.
Bootstrap support for F2SW98 as seed ortholog is 95%.

Group of orthologs #815. Best score 399 bits
Score difference with first non-orthologous sequence - C.neoformans:399 T.rubrum:399

P0CS12              	100.00%		F2ST54              	100.00%
Bootstrap support for P0CS12 as seed ortholog is 100%.
Bootstrap support for F2ST54 as seed ortholog is 100%.

Group of orthologs #816. Best score 399 bits
Score difference with first non-orthologous sequence - C.neoformans:399 T.rubrum:325

Q5KQ95              	100.00%		F2SGR6              	100.00%
Bootstrap support for Q5KQ95 as seed ortholog is 100%.
Bootstrap support for F2SGR6 as seed ortholog is 100%.

Group of orthologs #817. Best score 398 bits
Score difference with first non-orthologous sequence - C.neoformans:398 T.rubrum:343

Q5KD02              	100.00%		F2SGK6              	100.00%
                    	       		F2SJE6              	100.00%
Bootstrap support for Q5KD02 as seed ortholog is 100%.
Bootstrap support for F2SGK6 as seed ortholog is 100%.
Bootstrap support for F2SJE6 as seed ortholog is 100%.

Group of orthologs #818. Best score 398 bits
Score difference with first non-orthologous sequence - C.neoformans:398 T.rubrum:398

Q5KK47              	100.00%		F2SPY8              	100.00%
Bootstrap support for Q5KK47 as seed ortholog is 100%.
Bootstrap support for F2SPY8 as seed ortholog is 100%.

Group of orthologs #819. Best score 398 bits
Score difference with first non-orthologous sequence - C.neoformans:398 T.rubrum:398

Q5KP99              	100.00%		F2SP23              	100.00%
Bootstrap support for Q5KP99 as seed ortholog is 100%.
Bootstrap support for F2SP23 as seed ortholog is 100%.

Group of orthologs #820. Best score 398 bits
Score difference with first non-orthologous sequence - C.neoformans:398 T.rubrum:398

Q5KHW1              	100.00%		F2SVV7              	100.00%
Bootstrap support for Q5KHW1 as seed ortholog is 100%.
Bootstrap support for F2SVV7 as seed ortholog is 100%.

Group of orthologs #821. Best score 398 bits
Score difference with first non-orthologous sequence - C.neoformans:192 T.rubrum:398

Q5KLT3              	100.00%		F2STK8              	100.00%
Bootstrap support for Q5KLT3 as seed ortholog is 100%.
Bootstrap support for F2STK8 as seed ortholog is 100%.

Group of orthologs #822. Best score 397 bits
Score difference with first non-orthologous sequence - C.neoformans:397 T.rubrum:397

P0CS02              	100.00%		F2SNC7              	100.00%
P0CS04              	28.65%		
Bootstrap support for P0CS02 as seed ortholog is 100%.
Bootstrap support for F2SNC7 as seed ortholog is 100%.

Group of orthologs #823. Best score 397 bits
Score difference with first non-orthologous sequence - C.neoformans:316 T.rubrum:397

Q5KG91              	100.00%		F2SNE9              	100.00%
Bootstrap support for Q5KG91 as seed ortholog is 100%.
Bootstrap support for F2SNE9 as seed ortholog is 100%.

Group of orthologs #824. Best score 396 bits
Score difference with first non-orthologous sequence - C.neoformans:309 T.rubrum:396

Q5K952              	100.00%		F2SN24              	100.00%
Bootstrap support for Q5K952 as seed ortholog is 100%.
Bootstrap support for F2SN24 as seed ortholog is 100%.

Group of orthologs #825. Best score 396 bits
Score difference with first non-orthologous sequence - C.neoformans:396 T.rubrum:396

Q5KB98              	100.00%		F2SLJ0              	100.00%
Bootstrap support for Q5KB98 as seed ortholog is 100%.
Bootstrap support for F2SLJ0 as seed ortholog is 100%.

Group of orthologs #826. Best score 396 bits
Score difference with first non-orthologous sequence - C.neoformans:396 T.rubrum:396

Q5KH10              	100.00%		F2SI77              	100.00%
Bootstrap support for Q5KH10 as seed ortholog is 100%.
Bootstrap support for F2SI77 as seed ortholog is 100%.

Group of orthologs #827. Best score 396 bits
Score difference with first non-orthologous sequence - C.neoformans:396 T.rubrum:396

P0CP50              	100.00%		F2SWQ7              	100.00%
Bootstrap support for P0CP50 as seed ortholog is 100%.
Bootstrap support for F2SWQ7 as seed ortholog is 100%.

Group of orthologs #828. Best score 396 bits
Score difference with first non-orthologous sequence - C.neoformans:396 T.rubrum:396

Q5KNC5              	100.00%		F2STN5              	100.00%
Bootstrap support for Q5KNC5 as seed ortholog is 100%.
Bootstrap support for F2STN5 as seed ortholog is 100%.

Group of orthologs #829. Best score 395 bits
Score difference with first non-orthologous sequence - C.neoformans:395 T.rubrum:395

Q5KAM3              	100.00%		F2SPP0              	100.00%
Bootstrap support for Q5KAM3 as seed ortholog is 100%.
Bootstrap support for F2SPP0 as seed ortholog is 100%.

Group of orthologs #830. Best score 394 bits
Score difference with first non-orthologous sequence - C.neoformans:394 T.rubrum:394

Q5KIY7              	100.00%		F2SS86              	100.00%
Bootstrap support for Q5KIY7 as seed ortholog is 100%.
Bootstrap support for F2SS86 as seed ortholog is 100%.

Group of orthologs #831. Best score 394 bits
Score difference with first non-orthologous sequence - C.neoformans:394 T.rubrum:394

Q5KFT4              	100.00%		F2SVV3              	100.00%
Bootstrap support for Q5KFT4 as seed ortholog is 100%.
Bootstrap support for F2SVV3 as seed ortholog is 100%.

Group of orthologs #832. Best score 394 bits
Score difference with first non-orthologous sequence - C.neoformans:394 T.rubrum:102

Q5KIH5              	100.00%		F2T0Q6              	100.00%
Bootstrap support for Q5KIH5 as seed ortholog is 100%.
Bootstrap support for F2T0Q6 as seed ortholog is 98%.

Group of orthologs #833. Best score 393 bits
Score difference with first non-orthologous sequence - C.neoformans:393 T.rubrum:393

Q5K8C0              	100.00%		F2SNY6              	100.00%
Bootstrap support for Q5K8C0 as seed ortholog is 100%.
Bootstrap support for F2SNY6 as seed ortholog is 100%.

Group of orthologs #834. Best score 393 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubrum:393

Q5KAK1              	100.00%		F2SZU5              	100.00%
Bootstrap support for Q5KAK1 as seed ortholog is 99%.
Bootstrap support for F2SZU5 as seed ortholog is 100%.

Group of orthologs #835. Best score 393 bits
Score difference with first non-orthologous sequence - C.neoformans:336 T.rubrum:329

Q5KJV1              	100.00%		F2SU33              	100.00%
Bootstrap support for Q5KJV1 as seed ortholog is 100%.
Bootstrap support for F2SU33 as seed ortholog is 100%.

Group of orthologs #836. Best score 393 bits
Score difference with first non-orthologous sequence - C.neoformans:306 T.rubrum:393

Q5KLM4              	100.00%		F2SYH0              	100.00%
Bootstrap support for Q5KLM4 as seed ortholog is 100%.
Bootstrap support for F2SYH0 as seed ortholog is 100%.

Group of orthologs #837. Best score 392 bits
Score difference with first non-orthologous sequence - C.neoformans:392 T.rubrum:392

P0CS60              	100.00%		F2SHJ8              	100.00%
Bootstrap support for P0CS60 as seed ortholog is 100%.
Bootstrap support for F2SHJ8 as seed ortholog is 100%.

Group of orthologs #838. Best score 392 bits
Score difference with first non-orthologous sequence - C.neoformans:392 T.rubrum:392

P0CM20              	100.00%		F2SYZ4              	100.00%
Bootstrap support for P0CM20 as seed ortholog is 100%.
Bootstrap support for F2SYZ4 as seed ortholog is 100%.

Group of orthologs #839. Best score 392 bits
Score difference with first non-orthologous sequence - C.neoformans:392 T.rubrum:392

Q5KAH0              	100.00%		F2SUM6              	100.00%
Bootstrap support for Q5KAH0 as seed ortholog is 100%.
Bootstrap support for F2SUM6 as seed ortholog is 100%.

Group of orthologs #840. Best score 391 bits
Score difference with first non-orthologous sequence - C.neoformans:391 T.rubrum:391

Q5KDW3              	100.00%		F2SDM8              	100.00%
Bootstrap support for Q5KDW3 as seed ortholog is 100%.
Bootstrap support for F2SDM8 as seed ortholog is 100%.

Group of orthologs #841. Best score 391 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubrum:170

Q5K756              	100.00%		F2SMZ8              	100.00%
Bootstrap support for Q5K756 as seed ortholog is 99%.
Bootstrap support for F2SMZ8 as seed ortholog is 100%.

Group of orthologs #842. Best score 391 bits
Score difference with first non-orthologous sequence - C.neoformans:258 T.rubrum:286

Q5KJK1              	100.00%		F2STK1              	100.00%
Bootstrap support for Q5KJK1 as seed ortholog is 100%.
Bootstrap support for F2STK1 as seed ortholog is 100%.

Group of orthologs #843. Best score 390 bits
Score difference with first non-orthologous sequence - C.neoformans:318 T.rubrum:260

P0CS28              	100.00%		F2SRD5              	100.00%
Bootstrap support for P0CS28 as seed ortholog is 100%.
Bootstrap support for F2SRD5 as seed ortholog is 100%.

Group of orthologs #844. Best score 390 bits
Score difference with first non-orthologous sequence - C.neoformans:390 T.rubrum:390

Q5KFA7              	100.00%		F2SJ00              	100.00%
Bootstrap support for Q5KFA7 as seed ortholog is 100%.
Bootstrap support for F2SJ00 as seed ortholog is 100%.

Group of orthologs #845. Best score 390 bits
Score difference with first non-orthologous sequence - C.neoformans:390 T.rubrum:390

Q5KEA8              	100.00%		F2SXE6              	100.00%
Bootstrap support for Q5KEA8 as seed ortholog is 100%.
Bootstrap support for F2SXE6 as seed ortholog is 100%.

Group of orthologs #846. Best score 390 bits
Score difference with first non-orthologous sequence - C.neoformans:390 T.rubrum:44

Q5KII9              	100.00%		F2SXH8              	100.00%
Bootstrap support for Q5KII9 as seed ortholog is 100%.
Bootstrap support for F2SXH8 as seed ortholog is 85%.

Group of orthologs #847. Best score 389 bits
Score difference with first non-orthologous sequence - C.neoformans:223 T.rubrum:221

P0CQ90              	100.00%		F2SLU2              	100.00%
Bootstrap support for P0CQ90 as seed ortholog is 99%.
Bootstrap support for F2SLU2 as seed ortholog is 99%.

Group of orthologs #848. Best score 389 bits
Score difference with first non-orthologous sequence - C.neoformans:389 T.rubrum:389

Q5KE15              	100.00%		F2SPQ7              	100.00%
Bootstrap support for Q5KE15 as seed ortholog is 100%.
Bootstrap support for F2SPQ7 as seed ortholog is 100%.

Group of orthologs #849. Best score 389 bits
Score difference with first non-orthologous sequence - C.neoformans:206 T.rubrum:325

P0CS76              	100.00%		F2SYU9              	100.00%
Bootstrap support for P0CS76 as seed ortholog is 99%.
Bootstrap support for F2SYU9 as seed ortholog is 100%.

Group of orthologs #850. Best score 389 bits
Score difference with first non-orthologous sequence - C.neoformans:389 T.rubrum:389

Q5KMY7              	100.00%		F2SUF4              	100.00%
Bootstrap support for Q5KMY7 as seed ortholog is 100%.
Bootstrap support for F2SUF4 as seed ortholog is 100%.

Group of orthologs #851. Best score 389 bits
Score difference with first non-orthologous sequence - C.neoformans:24 T.rubrum:389

Q5KK57              	100.00%		F2T0W6              	100.00%
Bootstrap support for Q5KK57 as seed ortholog is 66%.
Alternative seed ortholog is Q5KN19 (24 bits away from this cluster)
Bootstrap support for F2T0W6 as seed ortholog is 100%.

Group of orthologs #852. Best score 388 bits
Score difference with first non-orthologous sequence - C.neoformans:223 T.rubrum:238

P0CQ94              	100.00%		F2SR34              	100.00%
Bootstrap support for P0CQ94 as seed ortholog is 99%.
Bootstrap support for F2SR34 as seed ortholog is 99%.

Group of orthologs #853. Best score 387 bits
Score difference with first non-orthologous sequence - C.neoformans:184 T.rubrum:263

Q5K761              	100.00%		F2SNV1              	100.00%
Bootstrap support for Q5K761 as seed ortholog is 100%.
Bootstrap support for F2SNV1 as seed ortholog is 100%.

Group of orthologs #854. Best score 387 bits
Score difference with first non-orthologous sequence - C.neoformans:191 T.rubrum:110

Q5KJI0              	100.00%		F2SE56              	100.00%
Bootstrap support for Q5KJI0 as seed ortholog is 99%.
Bootstrap support for F2SE56 as seed ortholog is 99%.

Group of orthologs #855. Best score 387 bits
Score difference with first non-orthologous sequence - C.neoformans:387 T.rubrum:387

Q5KBD4              	100.00%		F2SYQ7              	100.00%
Bootstrap support for Q5KBD4 as seed ortholog is 100%.
Bootstrap support for F2SYQ7 as seed ortholog is 100%.

Group of orthologs #856. Best score 386 bits
Score difference with first non-orthologous sequence - C.neoformans:386 T.rubrum:386

Q5K9S7              	100.00%		F2SJQ5              	100.00%
Bootstrap support for Q5K9S7 as seed ortholog is 100%.
Bootstrap support for F2SJQ5 as seed ortholog is 100%.

Group of orthologs #857. Best score 386 bits
Score difference with first non-orthologous sequence - C.neoformans:386 T.rubrum:322

Q5KLQ6              	100.00%		F2SVJ4              	100.00%
Bootstrap support for Q5KLQ6 as seed ortholog is 100%.
Bootstrap support for F2SVJ4 as seed ortholog is 100%.

Group of orthologs #858. Best score 385 bits
Score difference with first non-orthologous sequence - C.neoformans:385 T.rubrum:385

Q5KP78              	100.00%		F2SJF5              	100.00%
Q5KP94              	37.22%		
Bootstrap support for Q5KP78 as seed ortholog is 100%.
Bootstrap support for F2SJF5 as seed ortholog is 100%.

Group of orthologs #859. Best score 384 bits
Score difference with first non-orthologous sequence - C.neoformans:132 T.rubrum:56

Q5KHX6              	100.00%		F2SHS1              	100.00%
Q5KI02              	42.61%		
Bootstrap support for Q5KHX6 as seed ortholog is 99%.
Bootstrap support for F2SHS1 as seed ortholog is 88%.

Group of orthologs #860. Best score 384 bits
Score difference with first non-orthologous sequence - C.neoformans:384 T.rubrum:384

Q5KDT2              	100.00%		F2SKU9              	100.00%
Bootstrap support for Q5KDT2 as seed ortholog is 100%.
Bootstrap support for F2SKU9 as seed ortholog is 100%.

Group of orthologs #861. Best score 384 bits
Score difference with first non-orthologous sequence - C.neoformans:384 T.rubrum:384

Q5KNU2              	100.00%		F2SZH6              	100.00%
Bootstrap support for Q5KNU2 as seed ortholog is 100%.
Bootstrap support for F2SZH6 as seed ortholog is 100%.

Group of orthologs #862. Best score 383 bits
Score difference with first non-orthologous sequence - C.neoformans:383 T.rubrum:383

Q5KBJ5              	100.00%		F2SCG5              	100.00%
Bootstrap support for Q5KBJ5 as seed ortholog is 100%.
Bootstrap support for F2SCG5 as seed ortholog is 100%.

Group of orthologs #863. Best score 383 bits
Score difference with first non-orthologous sequence - C.neoformans:204 T.rubrum:231

Q5KCA0              	100.00%		F2SVC0              	100.00%
Bootstrap support for Q5KCA0 as seed ortholog is 100%.
Bootstrap support for F2SVC0 as seed ortholog is 100%.

Group of orthologs #864. Best score 383 bits
Score difference with first non-orthologous sequence - C.neoformans:383 T.rubrum:383

Q5KLF5              	100.00%		F2SM67              	100.00%
Bootstrap support for Q5KLF5 as seed ortholog is 100%.
Bootstrap support for F2SM67 as seed ortholog is 100%.

Group of orthologs #865. Best score 383 bits
Score difference with first non-orthologous sequence - C.neoformans:383 T.rubrum:383

Q5KM46              	100.00%		F2SXZ8              	100.00%
Bootstrap support for Q5KM46 as seed ortholog is 100%.
Bootstrap support for F2SXZ8 as seed ortholog is 100%.

Group of orthologs #866. Best score 382 bits
Score difference with first non-orthologous sequence - C.neoformans:382 T.rubrum:382

Q5KAP5              	100.00%		F2SVE2              	100.00%
Bootstrap support for Q5KAP5 as seed ortholog is 100%.
Bootstrap support for F2SVE2 as seed ortholog is 100%.

Group of orthologs #867. Best score 382 bits
Score difference with first non-orthologous sequence - C.neoformans:382 T.rubrum:382

Q5KHS1              	100.00%		F2SQ69              	100.00%
Bootstrap support for Q5KHS1 as seed ortholog is 100%.
Bootstrap support for F2SQ69 as seed ortholog is 100%.

Group of orthologs #868. Best score 381 bits
Score difference with first non-orthologous sequence - C.neoformans:381 T.rubrum:25

Q5KAK7              	100.00%		F2SDW1              	100.00%
Q5KAK8              	56.35%		
Bootstrap support for Q5KAK7 as seed ortholog is 100%.
Bootstrap support for F2SDW1 as seed ortholog is 72%.
Alternative seed ortholog is F2T0Q7 (25 bits away from this cluster)

Group of orthologs #869. Best score 381 bits
Score difference with first non-orthologous sequence - C.neoformans:381 T.rubrum:381

Q5K7H6              	100.00%		F2SP00              	100.00%
Bootstrap support for Q5K7H6 as seed ortholog is 100%.
Bootstrap support for F2SP00 as seed ortholog is 100%.

Group of orthologs #870. Best score 381 bits
Score difference with first non-orthologous sequence - C.neoformans:381 T.rubrum:381

Q5KCX2              	100.00%		F2SJ62              	100.00%
Bootstrap support for Q5KCX2 as seed ortholog is 100%.
Bootstrap support for F2SJ62 as seed ortholog is 100%.

Group of orthologs #871. Best score 381 bits
Score difference with first non-orthologous sequence - C.neoformans:381 T.rubrum:381

Q5KDM7              	100.00%		F2SQS9              	100.00%
Bootstrap support for Q5KDM7 as seed ortholog is 100%.
Bootstrap support for F2SQS9 as seed ortholog is 100%.

Group of orthologs #872. Best score 381 bits
Score difference with first non-orthologous sequence - C.neoformans:381 T.rubrum:381

Q5K8P5              	100.00%		F2SYG1              	100.00%
Bootstrap support for Q5K8P5 as seed ortholog is 100%.
Bootstrap support for F2SYG1 as seed ortholog is 100%.

Group of orthologs #873. Best score 380 bits
Score difference with first non-orthologous sequence - C.neoformans:380 T.rubrum:380

Q5K9Q6              	100.00%		F2SQ50              	100.00%
Bootstrap support for Q5K9Q6 as seed ortholog is 100%.
Bootstrap support for F2SQ50 as seed ortholog is 100%.

Group of orthologs #874. Best score 380 bits
Score difference with first non-orthologous sequence - C.neoformans:380 T.rubrum:380

Q5KNK2              	100.00%		F2SGZ6              	100.00%
Bootstrap support for Q5KNK2 as seed ortholog is 100%.
Bootstrap support for F2SGZ6 as seed ortholog is 100%.

Group of orthologs #875. Best score 379 bits
Score difference with first non-orthologous sequence - C.neoformans:379 T.rubrum:199

Q5KK28              	100.00%		F2SLW5              	100.00%
                    	       		F2SVF7              	100.00%
Bootstrap support for Q5KK28 as seed ortholog is 100%.
Bootstrap support for F2SLW5 as seed ortholog is 99%.
Bootstrap support for F2SVF7 as seed ortholog is 99%.

Group of orthologs #876. Best score 379 bits
Score difference with first non-orthologous sequence - C.neoformans:196 T.rubrum:167

Q5K8E4              	100.00%		F2SGP5              	100.00%
Bootstrap support for Q5K8E4 as seed ortholog is 100%.
Bootstrap support for F2SGP5 as seed ortholog is 99%.

Group of orthologs #877. Best score 379 bits
Score difference with first non-orthologous sequence - C.neoformans:379 T.rubrum:379

Q5KF18              	100.00%		F2SBQ5              	100.00%
Bootstrap support for Q5KF18 as seed ortholog is 100%.
Bootstrap support for F2SBQ5 as seed ortholog is 100%.

Group of orthologs #878. Best score 379 bits
Score difference with first non-orthologous sequence - C.neoformans:379 T.rubrum:379

Q5KCW6              	100.00%		F2SL53              	100.00%
Bootstrap support for Q5KCW6 as seed ortholog is 100%.
Bootstrap support for F2SL53 as seed ortholog is 100%.

Group of orthologs #879. Best score 379 bits
Score difference with first non-orthologous sequence - C.neoformans:379 T.rubrum:379

Q5KMX3              	100.00%		F2SIW0              	100.00%
Bootstrap support for Q5KMX3 as seed ortholog is 100%.
Bootstrap support for F2SIW0 as seed ortholog is 100%.

Group of orthologs #880. Best score 379 bits
Score difference with first non-orthologous sequence - C.neoformans:379 T.rubrum:379

Q5KAZ7              	100.00%		F2SX12              	100.00%
Bootstrap support for Q5KAZ7 as seed ortholog is 100%.
Bootstrap support for F2SX12 as seed ortholog is 100%.

Group of orthologs #881. Best score 379 bits
Score difference with first non-orthologous sequence - C.neoformans:379 T.rubrum:379

Q5KQ94              	100.00%		F2SJT2              	100.00%
Bootstrap support for Q5KQ94 as seed ortholog is 100%.
Bootstrap support for F2SJT2 as seed ortholog is 100%.

Group of orthologs #882. Best score 379 bits
Score difference with first non-orthologous sequence - C.neoformans:379 T.rubrum:379

Q5KK29              	100.00%		F2SRC7              	100.00%
Bootstrap support for Q5KK29 as seed ortholog is 100%.
Bootstrap support for F2SRC7 as seed ortholog is 100%.

Group of orthologs #883. Best score 379 bits
Score difference with first non-orthologous sequence - C.neoformans:296 T.rubrum:280

Q5KN75              	100.00%		F2SZS7              	100.00%
Bootstrap support for Q5KN75 as seed ortholog is 100%.
Bootstrap support for F2SZS7 as seed ortholog is 100%.

Group of orthologs #884. Best score 378 bits
Score difference with first non-orthologous sequence - C.neoformans:378 T.rubrum:378

Q5KH85              	100.00%		F2SHF7              	100.00%
Bootstrap support for Q5KH85 as seed ortholog is 100%.
Bootstrap support for F2SHF7 as seed ortholog is 100%.

Group of orthologs #885. Best score 378 bits
Score difference with first non-orthologous sequence - C.neoformans:378 T.rubrum:378

Q5KHY1              	100.00%		F2SGU7              	100.00%
Bootstrap support for Q5KHY1 as seed ortholog is 100%.
Bootstrap support for F2SGU7 as seed ortholog is 100%.

Group of orthologs #886. Best score 378 bits
Score difference with first non-orthologous sequence - C.neoformans:328 T.rubrum:378

Q5KEP3              	100.00%		F2SZF2              	100.00%
Bootstrap support for Q5KEP3 as seed ortholog is 100%.
Bootstrap support for F2SZF2 as seed ortholog is 100%.

Group of orthologs #887. Best score 377 bits
Score difference with first non-orthologous sequence - C.neoformans:377 T.rubrum:377

P0CP88              	100.00%		F2SU78              	100.00%
Bootstrap support for P0CP88 as seed ortholog is 100%.
Bootstrap support for F2SU78 as seed ortholog is 100%.

Group of orthologs #888. Best score 377 bits
Score difference with first non-orthologous sequence - C.neoformans:377 T.rubrum:377

Q5K7C9              	100.00%		F2STU5              	100.00%
Bootstrap support for Q5K7C9 as seed ortholog is 100%.
Bootstrap support for F2STU5 as seed ortholog is 100%.

Group of orthologs #889. Best score 377 bits
Score difference with first non-orthologous sequence - C.neoformans:122 T.rubrum:284

Q5KL60              	100.00%		F2SZ07              	100.00%
Bootstrap support for Q5KL60 as seed ortholog is 97%.
Bootstrap support for F2SZ07 as seed ortholog is 100%.

Group of orthologs #890. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 T.rubrum:376

Q5KDR6              	100.00%		F2SIV8              	100.00%
Bootstrap support for Q5KDR6 as seed ortholog is 100%.
Bootstrap support for F2SIV8 as seed ortholog is 100%.

Group of orthologs #891. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 T.rubrum:376

Q5KFQ5              	100.00%		F2SH68              	100.00%
Bootstrap support for Q5KFQ5 as seed ortholog is 100%.
Bootstrap support for F2SH68 as seed ortholog is 100%.

Group of orthologs #892. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:191 T.rubrum:263

Q5KNM0              	100.00%		F2SKC5              	100.00%
Bootstrap support for Q5KNM0 as seed ortholog is 99%.
Bootstrap support for F2SKC5 as seed ortholog is 100%.

Group of orthologs #893. Best score 376 bits
Score difference with first non-orthologous sequence - C.neoformans:376 T.rubrum:376

Q5KLL8              	100.00%		F2SRH5              	100.00%
Bootstrap support for Q5KLL8 as seed ortholog is 100%.
Bootstrap support for F2SRH5 as seed ortholog is 100%.

Group of orthologs #894. Best score 375 bits
Score difference with first non-orthologous sequence - C.neoformans:375 T.rubrum:375

P0CR74              	100.00%		F2SUZ2              	100.00%
Bootstrap support for P0CR74 as seed ortholog is 100%.
Bootstrap support for F2SUZ2 as seed ortholog is 100%.

Group of orthologs #895. Best score 375 bits
Score difference with first non-orthologous sequence - C.neoformans:375 T.rubrum:375

Q5KLM3              	100.00%		F2SUH9              	100.00%
Bootstrap support for Q5KLM3 as seed ortholog is 100%.
Bootstrap support for F2SUH9 as seed ortholog is 100%.

Group of orthologs #896. Best score 374 bits
Score difference with first non-orthologous sequence - C.neoformans:374 T.rubrum:374

Q5K864              	100.00%		F2SHS4              	100.00%
Bootstrap support for Q5K864 as seed ortholog is 100%.
Bootstrap support for F2SHS4 as seed ortholog is 100%.

Group of orthologs #897. Best score 374 bits
Score difference with first non-orthologous sequence - C.neoformans:374 T.rubrum:374

Q5KGX9              	100.00%		F2SJ29              	100.00%
Bootstrap support for Q5KGX9 as seed ortholog is 100%.
Bootstrap support for F2SJ29 as seed ortholog is 100%.

Group of orthologs #898. Best score 374 bits
Score difference with first non-orthologous sequence - C.neoformans:374 T.rubrum:374

P0CS38              	100.00%		F2T0S5              	100.00%
Bootstrap support for P0CS38 as seed ortholog is 100%.
Bootstrap support for F2T0S5 as seed ortholog is 100%.

Group of orthologs #899. Best score 374 bits
Score difference with first non-orthologous sequence - C.neoformans:374 T.rubrum:317

Q5KHU8              	100.00%		F2SRG0              	100.00%
Bootstrap support for Q5KHU8 as seed ortholog is 100%.
Bootstrap support for F2SRG0 as seed ortholog is 100%.

Group of orthologs #900. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:373 T.rubrum:373

Q5KAB2              	100.00%		F2SDS7              	100.00%
Bootstrap support for Q5KAB2 as seed ortholog is 100%.
Bootstrap support for F2SDS7 as seed ortholog is 100%.

Group of orthologs #901. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:373 T.rubrum:373

Q5KQ43              	100.00%		F2SHH9              	100.00%
Bootstrap support for Q5KQ43 as seed ortholog is 100%.
Bootstrap support for F2SHH9 as seed ortholog is 100%.

Group of orthologs #902. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:373 T.rubrum:373

Q5KLR8              	100.00%		F2SPU8              	100.00%
Bootstrap support for Q5KLR8 as seed ortholog is 100%.
Bootstrap support for F2SPU8 as seed ortholog is 100%.

Group of orthologs #903. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:373 T.rubrum:373

Q5KHZ2              	100.00%		F2SXJ9              	100.00%
Bootstrap support for Q5KHZ2 as seed ortholog is 100%.
Bootstrap support for F2SXJ9 as seed ortholog is 100%.

Group of orthologs #904. Best score 373 bits
Score difference with first non-orthologous sequence - C.neoformans:373 T.rubrum:373

Q5KKT0              	100.00%		F2SV69              	100.00%
Bootstrap support for Q5KKT0 as seed ortholog is 100%.
Bootstrap support for F2SV69 as seed ortholog is 100%.

Group of orthologs #905. Best score 372 bits
Score difference with first non-orthologous sequence - C.neoformans:372 T.rubrum:328

Q5K7W7              	100.00%		F2SPX3              	100.00%
Bootstrap support for Q5K7W7 as seed ortholog is 100%.
Bootstrap support for F2SPX3 as seed ortholog is 100%.

Group of orthologs #906. Best score 372 bits
Score difference with first non-orthologous sequence - C.neoformans:372 T.rubrum:372

Q5KCY9              	100.00%		F2SQR2              	100.00%
Bootstrap support for Q5KCY9 as seed ortholog is 100%.
Bootstrap support for F2SQR2 as seed ortholog is 100%.

Group of orthologs #907. Best score 372 bits
Score difference with first non-orthologous sequence - C.neoformans:372 T.rubrum:372

Q5KPK7              	100.00%		F2SKW5              	100.00%
Bootstrap support for Q5KPK7 as seed ortholog is 100%.
Bootstrap support for F2SKW5 as seed ortholog is 100%.

Group of orthologs #908. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:371 T.rubrum:371

Q5KBH1              	100.00%		F2SEJ7              	100.00%
Bootstrap support for Q5KBH1 as seed ortholog is 100%.
Bootstrap support for F2SEJ7 as seed ortholog is 100%.

Group of orthologs #909. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:371 T.rubrum:371

Q5KIM3              	100.00%		F2SM07              	100.00%
Bootstrap support for Q5KIM3 as seed ortholog is 100%.
Bootstrap support for F2SM07 as seed ortholog is 100%.

Group of orthologs #910. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:371 T.rubrum:371

Q5KJS0              	100.00%		F2SNV2              	100.00%
Bootstrap support for Q5KJS0 as seed ortholog is 100%.
Bootstrap support for F2SNV2 as seed ortholog is 100%.

Group of orthologs #911. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:371 T.rubrum:371

Q5KJU2              	100.00%		F2SP81              	100.00%
Bootstrap support for Q5KJU2 as seed ortholog is 100%.
Bootstrap support for F2SP81 as seed ortholog is 100%.

Group of orthologs #912. Best score 371 bits
Score difference with first non-orthologous sequence - C.neoformans:371 T.rubrum:371

Q5KL14              	100.00%		F2SS26              	100.00%
Bootstrap support for Q5KL14 as seed ortholog is 100%.
Bootstrap support for F2SS26 as seed ortholog is 100%.

Group of orthologs #913. Best score 370 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubrum:370

Q5KK04              	100.00%		F2T190              	100.00%
                    	       		F2SK84              	12.84%
Bootstrap support for Q5KK04 as seed ortholog is 99%.
Bootstrap support for F2T190 as seed ortholog is 100%.

Group of orthologs #914. Best score 370 bits
Score difference with first non-orthologous sequence - C.neoformans:370 T.rubrum:370

Q5KQ18              	100.00%		F2SC39              	100.00%
Bootstrap support for Q5KQ18 as seed ortholog is 100%.
Bootstrap support for F2SC39 as seed ortholog is 100%.

Group of orthologs #915. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:150 T.rubrum:167

Q5KH03              	100.00%		F2SGF2              	100.00%
Bootstrap support for Q5KH03 as seed ortholog is 99%.
Bootstrap support for F2SGF2 as seed ortholog is 99%.

Group of orthologs #916. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:369 T.rubrum:369

Q5KBK6              	100.00%		F2SM85              	100.00%
Bootstrap support for Q5KBK6 as seed ortholog is 100%.
Bootstrap support for F2SM85 as seed ortholog is 100%.

Group of orthologs #917. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:369 T.rubrum:369

Q5KKG9              	100.00%		F2SFW8              	100.00%
Bootstrap support for Q5KKG9 as seed ortholog is 100%.
Bootstrap support for F2SFW8 as seed ortholog is 100%.

Group of orthologs #918. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:369 T.rubrum:369

Q5KAI7              	100.00%		F2SQM9              	100.00%
Bootstrap support for Q5KAI7 as seed ortholog is 100%.
Bootstrap support for F2SQM9 as seed ortholog is 100%.

Group of orthologs #919. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:35 T.rubrum:80

Q5KJX7              	100.00%		F2SVX9              	100.00%
Bootstrap support for Q5KJX7 as seed ortholog is 75%.
Bootstrap support for F2SVX9 as seed ortholog is 97%.

Group of orthologs #920. Best score 369 bits
Score difference with first non-orthologous sequence - C.neoformans:369 T.rubrum:369

Q5KPT5              	100.00%		F2SW77              	100.00%
Bootstrap support for Q5KPT5 as seed ortholog is 100%.
Bootstrap support for F2SW77 as seed ortholog is 100%.

Group of orthologs #921. Best score 366 bits
Score difference with first non-orthologous sequence - C.neoformans:366 T.rubrum:366

Q5K870              	100.00%		F2SHA4              	100.00%
Bootstrap support for Q5K870 as seed ortholog is 100%.
Bootstrap support for F2SHA4 as seed ortholog is 100%.

Group of orthologs #922. Best score 366 bits
Score difference with first non-orthologous sequence - C.neoformans:366 T.rubrum:366

Q5KJU1              	100.00%		F2SK25              	100.00%
Bootstrap support for Q5KJU1 as seed ortholog is 100%.
Bootstrap support for F2SK25 as seed ortholog is 100%.

Group of orthologs #923. Best score 366 bits
Score difference with first non-orthologous sequence - C.neoformans:366 T.rubrum:366

P0CM46              	100.00%		F2SYN8              	100.00%
Bootstrap support for P0CM46 as seed ortholog is 100%.
Bootstrap support for F2SYN8 as seed ortholog is 100%.

Group of orthologs #924. Best score 366 bits
Score difference with first non-orthologous sequence - C.neoformans:193 T.rubrum:216

Q5KQ09              	100.00%		F2SNW3              	100.00%
Bootstrap support for Q5KQ09 as seed ortholog is 99%.
Bootstrap support for F2SNW3 as seed ortholog is 99%.

Group of orthologs #925. Best score 365 bits
Score difference with first non-orthologous sequence - C.neoformans:230 T.rubrum:365

Q5KC00              	100.00%		F2SJ17              	100.00%
                    	       		F2SZ90              	12.46%
Bootstrap support for Q5KC00 as seed ortholog is 100%.
Bootstrap support for F2SJ17 as seed ortholog is 100%.

Group of orthologs #926. Best score 365 bits
Score difference with first non-orthologous sequence - C.neoformans:365 T.rubrum:294

Q5KDN8              	100.00%		F2SMS3              	100.00%
Bootstrap support for Q5KDN8 as seed ortholog is 100%.
Bootstrap support for F2SMS3 as seed ortholog is 100%.

Group of orthologs #927. Best score 365 bits
Score difference with first non-orthologous sequence - C.neoformans:365 T.rubrum:365

Q5KIU7              	100.00%		F2SU67              	100.00%
Bootstrap support for Q5KIU7 as seed ortholog is 100%.
Bootstrap support for F2SU67 as seed ortholog is 100%.

Group of orthologs #928. Best score 365 bits
Score difference with first non-orthologous sequence - C.neoformans:365 T.rubrum:365

Q5KNJ8              	100.00%		F2SYI4              	100.00%
Bootstrap support for Q5KNJ8 as seed ortholog is 100%.
Bootstrap support for F2SYI4 as seed ortholog is 100%.

Group of orthologs #929. Best score 364 bits
Score difference with first non-orthologous sequence - C.neoformans:364 T.rubrum:364

Q5KK40              	100.00%		F2SZF1              	100.00%
Bootstrap support for Q5KK40 as seed ortholog is 100%.
Bootstrap support for F2SZF1 as seed ortholog is 100%.

Group of orthologs #930. Best score 362 bits
Score difference with first non-orthologous sequence - C.neoformans:362 T.rubrum:362

Q5KGR5              	100.00%		F2SDR0              	100.00%
Bootstrap support for Q5KGR5 as seed ortholog is 100%.
Bootstrap support for F2SDR0 as seed ortholog is 100%.

Group of orthologs #931. Best score 362 bits
Score difference with first non-orthologous sequence - C.neoformans:362 T.rubrum:362

Q5KJM8              	100.00%		F2SJD4              	100.00%
Bootstrap support for Q5KJM8 as seed ortholog is 100%.
Bootstrap support for F2SJD4 as seed ortholog is 100%.

Group of orthologs #932. Best score 361 bits
Score difference with first non-orthologous sequence - C.neoformans:361 T.rubrum:361

Q5K7F2              	100.00%		F2SD40              	100.00%
                    	       		F2SS42              	6.85%
Bootstrap support for Q5K7F2 as seed ortholog is 100%.
Bootstrap support for F2SD40 as seed ortholog is 100%.

Group of orthologs #933. Best score 361 bits
Score difference with first non-orthologous sequence - C.neoformans:361 T.rubrum:361

Q5K8Z3              	100.00%		F2SPN5              	100.00%
Bootstrap support for Q5K8Z3 as seed ortholog is 100%.
Bootstrap support for F2SPN5 as seed ortholog is 100%.

Group of orthologs #934. Best score 361 bits
Score difference with first non-orthologous sequence - C.neoformans:361 T.rubrum:361

Q5K7N9              	100.00%		F2SU81              	100.00%
Bootstrap support for Q5K7N9 as seed ortholog is 100%.
Bootstrap support for F2SU81 as seed ortholog is 100%.

Group of orthologs #935. Best score 360 bits
Score difference with first non-orthologous sequence - C.neoformans:360 T.rubrum:360

Q5K7Z7              	100.00%		F2SDN2              	100.00%
Bootstrap support for Q5K7Z7 as seed ortholog is 100%.
Bootstrap support for F2SDN2 as seed ortholog is 100%.

Group of orthologs #936. Best score 360 bits
Score difference with first non-orthologous sequence - C.neoformans:360 T.rubrum:360

Q5KJ42              	100.00%		F2SEE2              	100.00%
Bootstrap support for Q5KJ42 as seed ortholog is 100%.
Bootstrap support for F2SEE2 as seed ortholog is 100%.

Group of orthologs #937. Best score 360 bits
Score difference with first non-orthologous sequence - C.neoformans:296 T.rubrum:308

P0CS32              	100.00%		F2SUD0              	100.00%
Bootstrap support for P0CS32 as seed ortholog is 100%.
Bootstrap support for F2SUD0 as seed ortholog is 100%.

Group of orthologs #938. Best score 360 bits
Score difference with first non-orthologous sequence - C.neoformans:360 T.rubrum:360

Q5KB80              	100.00%		F2SWR1              	100.00%
Bootstrap support for Q5KB80 as seed ortholog is 100%.
Bootstrap support for F2SWR1 as seed ortholog is 100%.

Group of orthologs #939. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:273 T.rubrum:269

Q5KGN7              	100.00%		F2SFJ9              	100.00%
Bootstrap support for Q5KGN7 as seed ortholog is 100%.
Bootstrap support for F2SFJ9 as seed ortholog is 100%.

Group of orthologs #940. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:359 T.rubrum:359

Q5KAQ3              	100.00%		F2SZM4              	100.00%
Bootstrap support for Q5KAQ3 as seed ortholog is 100%.
Bootstrap support for F2SZM4 as seed ortholog is 100%.

Group of orthologs #941. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:359 T.rubrum:359

Q5KEZ5              	100.00%		F2SXV5              	100.00%
Bootstrap support for Q5KEZ5 as seed ortholog is 100%.
Bootstrap support for F2SXV5 as seed ortholog is 100%.

Group of orthologs #942. Best score 359 bits
Score difference with first non-orthologous sequence - C.neoformans:359 T.rubrum:359

Q5KKK5              	100.00%		F2T0P6              	100.00%
Bootstrap support for Q5KKK5 as seed ortholog is 100%.
Bootstrap support for F2T0P6 as seed ortholog is 100%.

Group of orthologs #943. Best score 358 bits
Score difference with first non-orthologous sequence - C.neoformans:358 T.rubrum:358

Q5KIJ4              	100.00%		F2SEM9              	100.00%
Bootstrap support for Q5KIJ4 as seed ortholog is 100%.
Bootstrap support for F2SEM9 as seed ortholog is 100%.

Group of orthologs #944. Best score 358 bits
Score difference with first non-orthologous sequence - C.neoformans:358 T.rubrum:358

Q5KH76              	100.00%		F2SU30              	100.00%
Bootstrap support for Q5KH76 as seed ortholog is 100%.
Bootstrap support for F2SU30 as seed ortholog is 100%.

Group of orthologs #945. Best score 357 bits
Score difference with first non-orthologous sequence - C.neoformans:357 T.rubrum:314

Q5KM39              	100.00%		F2SSH7              	100.00%
                    	       		F2SMJ5              	5.73%
Bootstrap support for Q5KM39 as seed ortholog is 100%.
Bootstrap support for F2SSH7 as seed ortholog is 100%.

Group of orthologs #946. Best score 357 bits
Score difference with first non-orthologous sequence - C.neoformans:357 T.rubrum:357

P0CN18              	100.00%		F2SKC2              	100.00%
Bootstrap support for P0CN18 as seed ortholog is 100%.
Bootstrap support for F2SKC2 as seed ortholog is 100%.

Group of orthologs #947. Best score 357 bits
Score difference with first non-orthologous sequence - C.neoformans:357 T.rubrum:357

Q5KDB3              	100.00%		F2SP71              	100.00%
Bootstrap support for Q5KDB3 as seed ortholog is 100%.
Bootstrap support for F2SP71 as seed ortholog is 100%.

Group of orthologs #948. Best score 356 bits
Score difference with first non-orthologous sequence - C.neoformans:356 T.rubrum:356

P0CS66              	100.00%		F2SCV0              	100.00%
Bootstrap support for P0CS66 as seed ortholog is 100%.
Bootstrap support for F2SCV0 as seed ortholog is 100%.

Group of orthologs #949. Best score 356 bits
Score difference with first non-orthologous sequence - C.neoformans:356 T.rubrum:356

Q5KDG6              	100.00%		F2SG49              	100.00%
Bootstrap support for Q5KDG6 as seed ortholog is 100%.
Bootstrap support for F2SG49 as seed ortholog is 100%.

Group of orthologs #950. Best score 356 bits
Score difference with first non-orthologous sequence - C.neoformans:356 T.rubrum:356

Q5KJG7              	100.00%		F2SKI0              	100.00%
Bootstrap support for Q5KJG7 as seed ortholog is 100%.
Bootstrap support for F2SKI0 as seed ortholog is 100%.

Group of orthologs #951. Best score 356 bits
Score difference with first non-orthologous sequence - C.neoformans:356 T.rubrum:356

Q5KN42              	100.00%		F2SHS5              	100.00%
Bootstrap support for Q5KN42 as seed ortholog is 100%.
Bootstrap support for F2SHS5 as seed ortholog is 100%.

Group of orthologs #952. Best score 356 bits
Score difference with first non-orthologous sequence - C.neoformans:136 T.rubrum:261

Q5KP65              	100.00%		F2SJI5              	100.00%
Bootstrap support for Q5KP65 as seed ortholog is 99%.
Bootstrap support for F2SJI5 as seed ortholog is 100%.

Group of orthologs #953. Best score 356 bits
Score difference with first non-orthologous sequence - C.neoformans:356 T.rubrum:356

Q5K7Z5              	100.00%		F2SZU4              	100.00%
Bootstrap support for Q5K7Z5 as seed ortholog is 100%.
Bootstrap support for F2SZU4 as seed ortholog is 100%.

Group of orthologs #954. Best score 356 bits
Score difference with first non-orthologous sequence - C.neoformans:356 T.rubrum:356

Q5KGQ9              	100.00%		F2SSX1              	100.00%
Bootstrap support for Q5KGQ9 as seed ortholog is 100%.
Bootstrap support for F2SSX1 as seed ortholog is 100%.

Group of orthologs #955. Best score 355 bits
Score difference with first non-orthologous sequence - C.neoformans:355 T.rubrum:355

P0CR52              	100.00%		F2SGY8              	100.00%
Bootstrap support for P0CR52 as seed ortholog is 100%.
Bootstrap support for F2SGY8 as seed ortholog is 100%.

Group of orthologs #956. Best score 355 bits
Score difference with first non-orthologous sequence - C.neoformans:355 T.rubrum:355

Q5KHJ2              	100.00%		F2SC68              	100.00%
Bootstrap support for Q5KHJ2 as seed ortholog is 100%.
Bootstrap support for F2SC68 as seed ortholog is 100%.

Group of orthologs #957. Best score 355 bits
Score difference with first non-orthologous sequence - C.neoformans:355 T.rubrum:355

Q5K8L7              	100.00%		F2SWC9              	100.00%
Bootstrap support for Q5K8L7 as seed ortholog is 100%.
Bootstrap support for F2SWC9 as seed ortholog is 100%.

Group of orthologs #958. Best score 354 bits
Score difference with first non-orthologous sequence - C.neoformans:354 T.rubrum:235

Q5KA89              	100.00%		F2SHD7              	100.00%
Bootstrap support for Q5KA89 as seed ortholog is 100%.
Bootstrap support for F2SHD7 as seed ortholog is 100%.

Group of orthologs #959. Best score 353 bits
Score difference with first non-orthologous sequence - C.neoformans:164 T.rubrum:201

Q5KHB0              	100.00%		F2SP54              	100.00%
Bootstrap support for Q5KHB0 as seed ortholog is 99%.
Bootstrap support for F2SP54 as seed ortholog is 99%.

Group of orthologs #960. Best score 352 bits
Score difference with first non-orthologous sequence - C.neoformans:352 T.rubrum:352

Q5KJZ6              	100.00%		F2SGN2              	100.00%
Bootstrap support for Q5KJZ6 as seed ortholog is 100%.
Bootstrap support for F2SGN2 as seed ortholog is 100%.

Group of orthologs #961. Best score 352 bits
Score difference with first non-orthologous sequence - C.neoformans:352 T.rubrum:352

Q5KJ89              	100.00%		F2SJA3              	100.00%
Bootstrap support for Q5KJ89 as seed ortholog is 100%.
Bootstrap support for F2SJA3 as seed ortholog is 100%.

Group of orthologs #962. Best score 352 bits
Score difference with first non-orthologous sequence - C.neoformans:198 T.rubrum:352

Q5KE88              	100.00%		F2ST46              	100.00%
Bootstrap support for Q5KE88 as seed ortholog is 99%.
Bootstrap support for F2ST46 as seed ortholog is 100%.

Group of orthologs #963. Best score 352 bits
Score difference with first non-orthologous sequence - C.neoformans:352 T.rubrum:352

Q5KAL7              	100.00%		F2SWN0              	100.00%
Bootstrap support for Q5KAL7 as seed ortholog is 100%.
Bootstrap support for F2SWN0 as seed ortholog is 100%.

Group of orthologs #964. Best score 352 bits
Score difference with first non-orthologous sequence - C.neoformans:352 T.rubrum:352

Q5KNK7              	100.00%		F2SQQ6              	100.00%
Bootstrap support for Q5KNK7 as seed ortholog is 100%.
Bootstrap support for F2SQQ6 as seed ortholog is 100%.

Group of orthologs #965. Best score 351 bits
Score difference with first non-orthologous sequence - C.neoformans:37 T.rubrum:115

Q5KKS6              	100.00%		F2SCV7              	100.00%
Q5KBE7              	30.50%		
Bootstrap support for Q5KKS6 as seed ortholog is 80%.
Bootstrap support for F2SCV7 as seed ortholog is 99%.

Group of orthologs #966. Best score 351 bits
Score difference with first non-orthologous sequence - C.neoformans:193 T.rubrum:209

P0CO42              	100.00%		F2SU25              	100.00%
Bootstrap support for P0CO42 as seed ortholog is 100%.
Bootstrap support for F2SU25 as seed ortholog is 100%.

Group of orthologs #967. Best score 351 bits
Score difference with first non-orthologous sequence - C.neoformans:351 T.rubrum:351

Q5KEX7              	100.00%		F2SN00              	100.00%
Bootstrap support for Q5KEX7 as seed ortholog is 100%.
Bootstrap support for F2SN00 as seed ortholog is 100%.

Group of orthologs #968. Best score 351 bits
Score difference with first non-orthologous sequence - C.neoformans:351 T.rubrum:351

Q5KCK7              	100.00%		F2SQ67              	100.00%
Bootstrap support for Q5KCK7 as seed ortholog is 100%.
Bootstrap support for F2SQ67 as seed ortholog is 100%.

Group of orthologs #969. Best score 350 bits
Score difference with first non-orthologous sequence - C.neoformans:350 T.rubrum:350

Q5KPC1              	100.00%		F2SUD7              	100.00%
Bootstrap support for Q5KPC1 as seed ortholog is 100%.
Bootstrap support for F2SUD7 as seed ortholog is 100%.

Group of orthologs #970. Best score 350 bits
Score difference with first non-orthologous sequence - C.neoformans:350 T.rubrum:350

Q5KLE9              	100.00%		F2T0V3              	100.00%
Bootstrap support for Q5KLE9 as seed ortholog is 100%.
Bootstrap support for F2T0V3 as seed ortholog is 100%.

Group of orthologs #971. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:349 T.rubrum:349

P0CN50              	100.00%		F2SE93              	100.00%
Bootstrap support for P0CN50 as seed ortholog is 100%.
Bootstrap support for F2SE93 as seed ortholog is 100%.

Group of orthologs #972. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:349 T.rubrum:349

P0CO14              	100.00%		F2SFK8              	100.00%
Bootstrap support for P0CO14 as seed ortholog is 100%.
Bootstrap support for F2SFK8 as seed ortholog is 100%.

Group of orthologs #973. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:349 T.rubrum:349

Q5KCA4              	100.00%		F2SHI8              	100.00%
Bootstrap support for Q5KCA4 as seed ortholog is 100%.
Bootstrap support for F2SHI8 as seed ortholog is 100%.

Group of orthologs #974. Best score 349 bits
Score difference with first non-orthologous sequence - C.neoformans:184 T.rubrum:179

Q5KI66              	100.00%		F2SCT9              	100.00%
Bootstrap support for Q5KI66 as seed ortholog is 100%.
Bootstrap support for F2SCT9 as seed ortholog is 99%.

Group of orthologs #975. Best score 348 bits
Score difference with first non-orthologous sequence - C.neoformans:348 T.rubrum:348

Q5KB01              	100.00%		F2SVY3              	100.00%
Bootstrap support for Q5KB01 as seed ortholog is 100%.
Bootstrap support for F2SVY3 as seed ortholog is 100%.

Group of orthologs #976. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubrum:85

Q5KAS3              	100.00%		F2SLN6              	100.00%
                    	       		F2ST72              	11.08%
Bootstrap support for Q5KAS3 as seed ortholog is 94%.
Bootstrap support for F2SLN6 as seed ortholog is 95%.

Group of orthologs #977. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:347 T.rubrum:347

Q5KIM4              	100.00%		F2SZ14              	100.00%
                    	       		F2SMF7              	11.85%
Bootstrap support for Q5KIM4 as seed ortholog is 100%.
Bootstrap support for F2SZ14 as seed ortholog is 100%.

Group of orthologs #978. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:347 T.rubrum:347

Q5KKC2              	100.00%		F2SK18              	100.00%
Bootstrap support for Q5KKC2 as seed ortholog is 100%.
Bootstrap support for F2SK18 as seed ortholog is 100%.

Group of orthologs #979. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:347 T.rubrum:347

Q5K7Q6              	100.00%		F2SYQ4              	100.00%
Bootstrap support for Q5K7Q6 as seed ortholog is 100%.
Bootstrap support for F2SYQ4 as seed ortholog is 100%.

Group of orthologs #980. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:347 T.rubrum:347

Q5KLV6              	100.00%		F2SM75              	100.00%
Bootstrap support for Q5KLV6 as seed ortholog is 100%.
Bootstrap support for F2SM75 as seed ortholog is 100%.

Group of orthologs #981. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:214 T.rubrum:199

Q5KKS0              	100.00%		F2SS63              	100.00%
Bootstrap support for Q5KKS0 as seed ortholog is 100%.
Bootstrap support for F2SS63 as seed ortholog is 99%.

Group of orthologs #982. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:347 T.rubrum:347

Q5KAS7              	100.00%		F2T1B1              	100.00%
Bootstrap support for Q5KAS7 as seed ortholog is 100%.
Bootstrap support for F2T1B1 as seed ortholog is 100%.

Group of orthologs #983. Best score 347 bits
Score difference with first non-orthologous sequence - C.neoformans:347 T.rubrum:347

Q5KDX3              	100.00%		F2SZW7              	100.00%
Bootstrap support for Q5KDX3 as seed ortholog is 100%.
Bootstrap support for F2SZW7 as seed ortholog is 100%.

Group of orthologs #984. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:346 T.rubrum:346

Q5K772              	100.00%		F2SEL7              	100.00%
Bootstrap support for Q5K772 as seed ortholog is 100%.
Bootstrap support for F2SEL7 as seed ortholog is 100%.

Group of orthologs #985. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:346 T.rubrum:175

Q5KFY9              	100.00%		F2SQA5              	100.00%
Bootstrap support for Q5KFY9 as seed ortholog is 100%.
Bootstrap support for F2SQA5 as seed ortholog is 99%.

Group of orthologs #986. Best score 346 bits
Score difference with first non-orthologous sequence - C.neoformans:346 T.rubrum:346

Q5KIJ3              	100.00%		F2SYJ6              	100.00%
Bootstrap support for Q5KIJ3 as seed ortholog is 100%.
Bootstrap support for F2SYJ6 as seed ortholog is 100%.

Group of orthologs #987. Best score 345 bits
Score difference with first non-orthologous sequence - C.neoformans:345 T.rubrum:345

Q5KL88              	100.00%		F2SLB1              	100.00%
Bootstrap support for Q5KL88 as seed ortholog is 100%.
Bootstrap support for F2SLB1 as seed ortholog is 100%.

Group of orthologs #988. Best score 345 bits
Score difference with first non-orthologous sequence - C.neoformans:345 T.rubrum:345

Q5KDR0              	100.00%		F2STW9              	100.00%
Bootstrap support for Q5KDR0 as seed ortholog is 100%.
Bootstrap support for F2STW9 as seed ortholog is 100%.

Group of orthologs #989. Best score 345 bits
Score difference with first non-orthologous sequence - C.neoformans:345 T.rubrum:345

Q5KBJ2              	100.00%		F2T0X3              	100.00%
Bootstrap support for Q5KBJ2 as seed ortholog is 100%.
Bootstrap support for F2T0X3 as seed ortholog is 100%.

Group of orthologs #990. Best score 345 bits
Score difference with first non-orthologous sequence - C.neoformans:345 T.rubrum:345

Q5KJT1              	100.00%		F2SWY9              	100.00%
Bootstrap support for Q5KJT1 as seed ortholog is 100%.
Bootstrap support for F2SWY9 as seed ortholog is 100%.

Group of orthologs #991. Best score 344 bits
Score difference with first non-orthologous sequence - C.neoformans:344 T.rubrum:344

Q5K7W5              	100.00%		F2SJL9              	100.00%
Bootstrap support for Q5K7W5 as seed ortholog is 100%.
Bootstrap support for F2SJL9 as seed ortholog is 100%.

Group of orthologs #992. Best score 344 bits
Score difference with first non-orthologous sequence - C.neoformans:344 T.rubrum:344

Q5KPZ1              	100.00%		F2SBK1              	100.00%
Bootstrap support for Q5KPZ1 as seed ortholog is 100%.
Bootstrap support for F2SBK1 as seed ortholog is 100%.

Group of orthologs #993. Best score 344 bits
Score difference with first non-orthologous sequence - C.neoformans:344 T.rubrum:295

Q5KM94              	100.00%		F2SF43              	100.00%
Bootstrap support for Q5KM94 as seed ortholog is 100%.
Bootstrap support for F2SF43 as seed ortholog is 100%.

Group of orthologs #994. Best score 344 bits
Score difference with first non-orthologous sequence - C.neoformans:344 T.rubrum:344

Q5KP83              	100.00%		F2SL22              	100.00%
Bootstrap support for Q5KP83 as seed ortholog is 100%.
Bootstrap support for F2SL22 as seed ortholog is 100%.

Group of orthologs #995. Best score 344 bits
Score difference with first non-orthologous sequence - C.neoformans:273 T.rubrum:251

Q5KQ79              	100.00%		F2SX98              	100.00%
Bootstrap support for Q5KQ79 as seed ortholog is 100%.
Bootstrap support for F2SX98 as seed ortholog is 100%.

Group of orthologs #996. Best score 343 bits
Score difference with first non-orthologous sequence - C.neoformans:343 T.rubrum:343

Q5K6Y3              	100.00%		F2SL69              	100.00%
Bootstrap support for Q5K6Y3 as seed ortholog is 100%.
Bootstrap support for F2SL69 as seed ortholog is 100%.

Group of orthologs #997. Best score 343 bits
Score difference with first non-orthologous sequence - C.neoformans:343 T.rubrum:343

Q5K796              	100.00%		F2SNA1              	100.00%
Bootstrap support for Q5K796 as seed ortholog is 100%.
Bootstrap support for F2SNA1 as seed ortholog is 100%.

Group of orthologs #998. Best score 343 bits
Score difference with first non-orthologous sequence - C.neoformans:343 T.rubrum:30

Q5KB65              	100.00%		F2SM01              	100.00%
Bootstrap support for Q5KB65 as seed ortholog is 100%.
Bootstrap support for F2SM01 as seed ortholog is 98%.

Group of orthologs #999. Best score 343 bits
Score difference with first non-orthologous sequence - C.neoformans:343 T.rubrum:210

Q5KJQ8              	100.00%		F2SM46              	100.00%
Bootstrap support for Q5KJQ8 as seed ortholog is 100%.
Bootstrap support for F2SM46 as seed ortholog is 99%.

Group of orthologs #1000. Best score 343 bits
Score difference with first non-orthologous sequence - C.neoformans:343 T.rubrum:343

Q5KMA6              	100.00%		F2SJU3              	100.00%
Bootstrap support for Q5KMA6 as seed ortholog is 100%.
Bootstrap support for F2SJU3 as seed ortholog is 100%.

Group of orthologs #1001. Best score 343 bits
Score difference with first non-orthologous sequence - C.neoformans:343 T.rubrum:197

Q5KKF0              	100.00%		F2SS46              	100.00%
Bootstrap support for Q5KKF0 as seed ortholog is 100%.
Bootstrap support for F2SS46 as seed ortholog is 99%.

Group of orthologs #1002. Best score 342 bits
Score difference with first non-orthologous sequence - C.neoformans:62 T.rubrum:37

Q5KAX2              	100.00%		F2SXP3              	100.00%
Bootstrap support for Q5KAX2 as seed ortholog is 91%.
Bootstrap support for F2SXP3 as seed ortholog is 96%.

Group of orthologs #1003. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:341 T.rubrum:341

Q5KDK5              	100.00%		F2SHS6              	100.00%
Bootstrap support for Q5KDK5 as seed ortholog is 100%.
Bootstrap support for F2SHS6 as seed ortholog is 100%.

Group of orthologs #1004. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:255 T.rubrum:181

Q5KCS4              	100.00%		F2SX00              	100.00%
Bootstrap support for Q5KCS4 as seed ortholog is 100%.
Bootstrap support for F2SX00 as seed ortholog is 100%.

Group of orthologs #1005. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:341 T.rubrum:341

Q5KCE8              	100.00%		F2T0R2              	100.00%
Bootstrap support for Q5KCE8 as seed ortholog is 100%.
Bootstrap support for F2T0R2 as seed ortholog is 100%.

Group of orthologs #1006. Best score 341 bits
Score difference with first non-orthologous sequence - C.neoformans:341 T.rubrum:140

Q5KNM5              	100.00%		F2STV3              	100.00%
Bootstrap support for Q5KNM5 as seed ortholog is 100%.
Bootstrap support for F2STV3 as seed ortholog is 99%.

Group of orthologs #1007. Best score 340 bits
Score difference with first non-orthologous sequence - C.neoformans:340 T.rubrum:120

Q5K6Z9              	100.00%		F2SWE0              	100.00%
Bootstrap support for Q5K6Z9 as seed ortholog is 100%.
Bootstrap support for F2SWE0 as seed ortholog is 98%.

Group of orthologs #1008. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:339 T.rubrum:339

Q5KAQ6              	100.00%		F2SRX9              	100.00%
Bootstrap support for Q5KAQ6 as seed ortholog is 100%.
Bootstrap support for F2SRX9 as seed ortholog is 100%.

Group of orthologs #1009. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:339 T.rubrum:339

Q5KFQ7              	100.00%		F2SMM5              	100.00%
Bootstrap support for Q5KFQ7 as seed ortholog is 100%.
Bootstrap support for F2SMM5 as seed ortholog is 100%.

Group of orthologs #1010. Best score 339 bits
Score difference with first non-orthologous sequence - C.neoformans:339 T.rubrum:339

Q5KIV1              	100.00%		F2SN68              	100.00%
Bootstrap support for Q5KIV1 as seed ortholog is 100%.
Bootstrap support for F2SN68 as seed ortholog is 100%.

Group of orthologs #1011. Best score 338 bits
Score difference with first non-orthologous sequence - C.neoformans:338 T.rubrum:338

P0CQ60              	100.00%		F2T0N0              	100.00%
Bootstrap support for P0CQ60 as seed ortholog is 100%.
Bootstrap support for F2T0N0 as seed ortholog is 100%.

Group of orthologs #1012. Best score 338 bits
Score difference with first non-orthologous sequence - C.neoformans:338 T.rubrum:338

Q5KNG6              	100.00%		F2SKE7              	100.00%
Bootstrap support for Q5KNG6 as seed ortholog is 100%.
Bootstrap support for F2SKE7 as seed ortholog is 100%.

Group of orthologs #1013. Best score 338 bits
Score difference with first non-orthologous sequence - C.neoformans:338 T.rubrum:338

Q5KA78              	100.00%		F2SYI5              	100.00%
Bootstrap support for Q5KA78 as seed ortholog is 100%.
Bootstrap support for F2SYI5 as seed ortholog is 100%.

Group of orthologs #1014. Best score 337 bits
Score difference with first non-orthologous sequence - C.neoformans:337 T.rubrum:337

Q5K7Y4              	100.00%		F2SP38              	100.00%
                    	       		F2SC79              	13.81%
Bootstrap support for Q5K7Y4 as seed ortholog is 100%.
Bootstrap support for F2SP38 as seed ortholog is 100%.

Group of orthologs #1015. Best score 337 bits
Score difference with first non-orthologous sequence - C.neoformans:337 T.rubrum:337

Q5KBN7              	100.00%		F2SM18              	100.00%
Bootstrap support for Q5KBN7 as seed ortholog is 100%.
Bootstrap support for F2SM18 as seed ortholog is 100%.

Group of orthologs #1016. Best score 337 bits
Score difference with first non-orthologous sequence - C.neoformans:337 T.rubrum:337

Q5KDC5              	100.00%		F2SPY3              	100.00%
Bootstrap support for Q5KDC5 as seed ortholog is 100%.
Bootstrap support for F2SPY3 as seed ortholog is 100%.

Group of orthologs #1017. Best score 337 bits
Score difference with first non-orthologous sequence - C.neoformans:17 T.rubrum:337

Q5KER8              	100.00%		F2SPT3              	100.00%
Bootstrap support for Q5KER8 as seed ortholog is 64%.
Alternative seed ortholog is Q5KGW3 (17 bits away from this cluster)
Bootstrap support for F2SPT3 as seed ortholog is 100%.

Group of orthologs #1018. Best score 337 bits
Score difference with first non-orthologous sequence - C.neoformans:337 T.rubrum:337

Q5KQ48              	100.00%		F2SXE0              	100.00%
Bootstrap support for Q5KQ48 as seed ortholog is 100%.
Bootstrap support for F2SXE0 as seed ortholog is 100%.

Group of orthologs #1019. Best score 336 bits
Score difference with first non-orthologous sequence - C.neoformans:336 T.rubrum:336

Q5KC51              	100.00%		F2SC00              	100.00%
Bootstrap support for Q5KC51 as seed ortholog is 100%.
Bootstrap support for F2SC00 as seed ortholog is 100%.

Group of orthologs #1020. Best score 336 bits
Score difference with first non-orthologous sequence - C.neoformans:336 T.rubrum:336

Q5KCN6              	100.00%		F2SPX0              	100.00%
Bootstrap support for Q5KCN6 as seed ortholog is 100%.
Bootstrap support for F2SPX0 as seed ortholog is 100%.

Group of orthologs #1021. Best score 336 bits
Score difference with first non-orthologous sequence - C.neoformans:336 T.rubrum:336

Q5K9V0              	100.00%		F2SZV4              	100.00%
Bootstrap support for Q5K9V0 as seed ortholog is 100%.
Bootstrap support for F2SZV4 as seed ortholog is 100%.

Group of orthologs #1022. Best score 336 bits
Score difference with first non-orthologous sequence - C.neoformans:336 T.rubrum:336

Q5KJY8              	100.00%		F2SSV6              	100.00%
Bootstrap support for Q5KJY8 as seed ortholog is 100%.
Bootstrap support for F2SSV6 as seed ortholog is 100%.

Group of orthologs #1023. Best score 335 bits
Score difference with first non-orthologous sequence - C.neoformans:335 T.rubrum:160

Q5KAF9              	100.00%		F2SEI2              	100.00%
Bootstrap support for Q5KAF9 as seed ortholog is 100%.
Bootstrap support for F2SEI2 as seed ortholog is 99%.

Group of orthologs #1024. Best score 335 bits
Score difference with first non-orthologous sequence - C.neoformans:162 T.rubrum:192

Q5KJW4              	100.00%		F2SBX9              	100.00%
Bootstrap support for Q5KJW4 as seed ortholog is 99%.
Bootstrap support for F2SBX9 as seed ortholog is 100%.

Group of orthologs #1025. Best score 335 bits
Score difference with first non-orthologous sequence - C.neoformans:335 T.rubrum:335

Q5K7A7              	100.00%		F2SNS5              	100.00%
Bootstrap support for Q5K7A7 as seed ortholog is 100%.
Bootstrap support for F2SNS5 as seed ortholog is 100%.

Group of orthologs #1026. Best score 335 bits
Score difference with first non-orthologous sequence - C.neoformans:335 T.rubrum:335

Q5K8A1              	100.00%		F2SQY4              	100.00%
Bootstrap support for Q5K8A1 as seed ortholog is 100%.
Bootstrap support for F2SQY4 as seed ortholog is 100%.

Group of orthologs #1027. Best score 335 bits
Score difference with first non-orthologous sequence - C.neoformans:9 T.rubrum:140

Q5K7D3              	100.00%		F2SST0              	100.00%
Bootstrap support for Q5K7D3 as seed ortholog is 57%.
Alternative seed ortholog is Q5K7G0 (9 bits away from this cluster)
Bootstrap support for F2SST0 as seed ortholog is 99%.

Group of orthologs #1028. Best score 335 bits
Score difference with first non-orthologous sequence - C.neoformans:335 T.rubrum:335

Q5KEL1              	100.00%		F2SMH6              	100.00%
Bootstrap support for Q5KEL1 as seed ortholog is 100%.
Bootstrap support for F2SMH6 as seed ortholog is 100%.

Group of orthologs #1029. Best score 335 bits
Score difference with first non-orthologous sequence - C.neoformans:335 T.rubrum:335

P0CO12              	100.00%		F2SW13              	100.00%
Bootstrap support for P0CO12 as seed ortholog is 100%.
Bootstrap support for F2SW13 as seed ortholog is 100%.

Group of orthologs #1030. Best score 334 bits
Score difference with first non-orthologous sequence - C.neoformans:334 T.rubrum:334

P0CN76              	100.00%		F2SQ73              	100.00%
Q5KLY2              	26.50%		
Bootstrap support for P0CN76 as seed ortholog is 100%.
Bootstrap support for F2SQ73 as seed ortholog is 100%.

Group of orthologs #1031. Best score 334 bits
Score difference with first non-orthologous sequence - C.neoformans:190 T.rubrum:158

Q5KIG3              	100.00%		F2SFQ0              	100.00%
Bootstrap support for Q5KIG3 as seed ortholog is 100%.
Bootstrap support for F2SFQ0 as seed ortholog is 99%.

Group of orthologs #1032. Best score 334 bits
Score difference with first non-orthologous sequence - C.neoformans:14 T.rubrum:44

Q5KG51              	100.00%		F2SMW8              	100.00%
Bootstrap support for Q5KG51 as seed ortholog is 66%.
Alternative seed ortholog is Q5KDL0 (14 bits away from this cluster)
Bootstrap support for F2SMW8 as seed ortholog is 81%.

Group of orthologs #1033. Best score 334 bits
Score difference with first non-orthologous sequence - C.neoformans:334 T.rubrum:334

Q5K776              	100.00%		F2SZA2              	100.00%
Bootstrap support for Q5K776 as seed ortholog is 100%.
Bootstrap support for F2SZA2 as seed ortholog is 100%.

Group of orthologs #1034. Best score 334 bits
Score difference with first non-orthologous sequence - C.neoformans:334 T.rubrum:334

Q5KNI6              	100.00%		F2SJJ7              	100.00%
Bootstrap support for Q5KNI6 as seed ortholog is 100%.
Bootstrap support for F2SJJ7 as seed ortholog is 100%.

Group of orthologs #1035. Best score 334 bits
Score difference with first non-orthologous sequence - C.neoformans:334 T.rubrum:334

Q5KP68              	100.00%		F2SLM4              	100.00%
Bootstrap support for Q5KP68 as seed ortholog is 100%.
Bootstrap support for F2SLM4 as seed ortholog is 100%.

Group of orthologs #1036. Best score 334 bits
Score difference with first non-orthologous sequence - C.neoformans:334 T.rubrum:334

Q5KPW7              	100.00%		F2SQX9              	100.00%
Bootstrap support for Q5KPW7 as seed ortholog is 100%.
Bootstrap support for F2SQX9 as seed ortholog is 100%.

Group of orthologs #1037. Best score 333 bits
Score difference with first non-orthologous sequence - C.neoformans:250 T.rubrum:183

Q5KEL4              	100.00%		F2SE97              	100.00%
Bootstrap support for Q5KEL4 as seed ortholog is 99%.
Bootstrap support for F2SE97 as seed ortholog is 99%.

Group of orthologs #1038. Best score 333 bits
Score difference with first non-orthologous sequence - C.neoformans:333 T.rubrum:333

Q5KIQ7              	100.00%		F2SHA6              	100.00%
Bootstrap support for Q5KIQ7 as seed ortholog is 100%.
Bootstrap support for F2SHA6 as seed ortholog is 100%.

Group of orthologs #1039. Best score 333 bits
Score difference with first non-orthologous sequence - C.neoformans:333 T.rubrum:333

Q5KA07              	100.00%		F2SQC7              	100.00%
Bootstrap support for Q5KA07 as seed ortholog is 100%.
Bootstrap support for F2SQC7 as seed ortholog is 100%.

Group of orthologs #1040. Best score 333 bits
Score difference with first non-orthologous sequence - C.neoformans:83 T.rubrum:94

Q5KK24              	100.00%		F2SQT5              	100.00%
Bootstrap support for Q5KK24 as seed ortholog is 94%.
Bootstrap support for F2SQT5 as seed ortholog is 97%.

Group of orthologs #1041. Best score 333 bits
Score difference with first non-orthologous sequence - C.neoformans:333 T.rubrum:333

Q5KPQ4              	100.00%		F2SUR8              	100.00%
Bootstrap support for Q5KPQ4 as seed ortholog is 100%.
Bootstrap support for F2SUR8 as seed ortholog is 100%.

Group of orthologs #1042. Best score 332 bits
Score difference with first non-orthologous sequence - C.neoformans:332 T.rubrum:332

Q5KK34              	100.00%		F2SJ63              	100.00%
Bootstrap support for Q5KK34 as seed ortholog is 100%.
Bootstrap support for F2SJ63 as seed ortholog is 100%.

Group of orthologs #1043. Best score 332 bits
Score difference with first non-orthologous sequence - C.neoformans:237 T.rubrum:243

Q5K9D3              	100.00%		F2SWH3              	100.00%
Bootstrap support for Q5K9D3 as seed ortholog is 100%.
Bootstrap support for F2SWH3 as seed ortholog is 100%.

Group of orthologs #1044. Best score 331 bits
Score difference with first non-orthologous sequence - C.neoformans:331 T.rubrum:331

P0CN56              	100.00%		F2SCI5              	100.00%
Bootstrap support for P0CN56 as seed ortholog is 100%.
Bootstrap support for F2SCI5 as seed ortholog is 100%.

Group of orthologs #1045. Best score 331 bits
Score difference with first non-orthologous sequence - C.neoformans:331 T.rubrum:331

P0CQ58              	100.00%		F2SNG8              	100.00%
Bootstrap support for P0CQ58 as seed ortholog is 100%.
Bootstrap support for F2SNG8 as seed ortholog is 100%.

Group of orthologs #1046. Best score 331 bits
Score difference with first non-orthologous sequence - C.neoformans:331 T.rubrum:331

Q5KHK9              	100.00%		F2STB6              	100.00%
Bootstrap support for Q5KHK9 as seed ortholog is 100%.
Bootstrap support for F2STB6 as seed ortholog is 100%.

Group of orthologs #1047. Best score 331 bits
Score difference with first non-orthologous sequence - C.neoformans:331 T.rubrum:331

Q5KPW6              	100.00%		F2SME1              	100.00%
Bootstrap support for Q5KPW6 as seed ortholog is 100%.
Bootstrap support for F2SME1 as seed ortholog is 100%.

Group of orthologs #1048. Best score 330 bits
Score difference with first non-orthologous sequence - C.neoformans:330 T.rubrum:330

Q5KKR3              	100.00%		F2SG62              	100.00%
Bootstrap support for Q5KKR3 as seed ortholog is 100%.
Bootstrap support for F2SG62 as seed ortholog is 100%.

Group of orthologs #1049. Best score 330 bits
Score difference with first non-orthologous sequence - C.neoformans:219 T.rubrum:236

Q5K800              	100.00%		F2SW24              	100.00%
Bootstrap support for Q5K800 as seed ortholog is 99%.
Bootstrap support for F2SW24 as seed ortholog is 99%.

Group of orthologs #1050. Best score 330 bits
Score difference with first non-orthologous sequence - C.neoformans:330 T.rubrum:330

Q5KJ10              	100.00%		F2SPM6              	100.00%
Bootstrap support for Q5KJ10 as seed ortholog is 100%.
Bootstrap support for F2SPM6 as seed ortholog is 100%.

Group of orthologs #1051. Best score 329 bits
Score difference with first non-orthologous sequence - C.neoformans:199 T.rubrum:64

Q5KJ69              	100.00%		F2SH39              	100.00%
                    	       		F2SSH5              	30.55%
                    	       		F2SL81              	28.96%
                    	       		F2SRY9              	18.90%
                    	       		F2SRI3              	14.97%
                    	       		F2SSU5              	12.02%
Bootstrap support for Q5KJ69 as seed ortholog is 100%.
Bootstrap support for F2SH39 as seed ortholog is 92%.

Group of orthologs #1052. Best score 329 bits
Score difference with first non-orthologous sequence - C.neoformans:329 T.rubrum:124

Q5KPZ0              	100.00%		F2SBL5              	100.00%
                    	       		F2SN70              	21.14%
Bootstrap support for Q5KPZ0 as seed ortholog is 100%.
Bootstrap support for F2SBL5 as seed ortholog is 99%.

Group of orthologs #1053. Best score 329 bits
Score difference with first non-orthologous sequence - C.neoformans:329 T.rubrum:329

Q5KCC3              	100.00%		F2SCU4              	100.00%
Bootstrap support for Q5KCC3 as seed ortholog is 100%.
Bootstrap support for F2SCU4 as seed ortholog is 100%.

Group of orthologs #1054. Best score 329 bits
Score difference with first non-orthologous sequence - C.neoformans:329 T.rubrum:329

P0CQ24              	100.00%		F2SRR2              	100.00%
Bootstrap support for P0CQ24 as seed ortholog is 100%.
Bootstrap support for F2SRR2 as seed ortholog is 100%.

Group of orthologs #1055. Best score 329 bits
Score difference with first non-orthologous sequence - C.neoformans:329 T.rubrum:329

Q5KC07              	100.00%		F2SMH1              	100.00%
Bootstrap support for Q5KC07 as seed ortholog is 100%.
Bootstrap support for F2SMH1 as seed ortholog is 100%.

Group of orthologs #1056. Best score 329 bits
Score difference with first non-orthologous sequence - C.neoformans:105 T.rubrum:329

Q5KPK6              	100.00%		F2SCM0              	100.00%
Bootstrap support for Q5KPK6 as seed ortholog is 99%.
Bootstrap support for F2SCM0 as seed ortholog is 100%.

Group of orthologs #1057. Best score 329 bits
Score difference with first non-orthologous sequence - C.neoformans:329 T.rubrum:329

Q5KCG6              	100.00%		F2SUQ5              	100.00%
Bootstrap support for Q5KCG6 as seed ortholog is 100%.
Bootstrap support for F2SUQ5 as seed ortholog is 100%.

Group of orthologs #1058. Best score 328 bits
Score difference with first non-orthologous sequence - C.neoformans:328 T.rubrum:328

Q5K6Y5              	100.00%		F2SFH8              	100.00%
Bootstrap support for Q5K6Y5 as seed ortholog is 100%.
Bootstrap support for F2SFH8 as seed ortholog is 100%.

Group of orthologs #1059. Best score 328 bits
Score difference with first non-orthologous sequence - C.neoformans:200 T.rubrum:171

Q5KMV5              	100.00%		F2SBR2              	100.00%
Bootstrap support for Q5KMV5 as seed ortholog is 100%.
Bootstrap support for F2SBR2 as seed ortholog is 100%.

Group of orthologs #1060. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:327 T.rubrum:327

Q5KPC8              	100.00%		F2SSV9              	100.00%
                    	       		F2SY89              	35.12%
Bootstrap support for Q5KPC8 as seed ortholog is 100%.
Bootstrap support for F2SSV9 as seed ortholog is 100%.

Group of orthologs #1061. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubrum:270

Q5KPZ2              	100.00%		F2SU48              	100.00%
Q5KPJ4              	21.00%		
Bootstrap support for Q5KPZ2 as seed ortholog is 99%.
Bootstrap support for F2SU48 as seed ortholog is 100%.

Group of orthologs #1062. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:327 T.rubrum:327

P0CQ56              	100.00%		F2SEB1              	100.00%
Bootstrap support for P0CQ56 as seed ortholog is 100%.
Bootstrap support for F2SEB1 as seed ortholog is 100%.

Group of orthologs #1063. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:327 T.rubrum:327

Q5K830              	100.00%		F2SFN7              	100.00%
Bootstrap support for Q5K830 as seed ortholog is 100%.
Bootstrap support for F2SFN7 as seed ortholog is 100%.

Group of orthologs #1064. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:327 T.rubrum:327

P0CN60              	100.00%		F2SL46              	100.00%
Bootstrap support for P0CN60 as seed ortholog is 100%.
Bootstrap support for F2SL46 as seed ortholog is 100%.

Group of orthologs #1065. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:327 T.rubrum:327

P0CR78              	100.00%		F2SM83              	100.00%
Bootstrap support for P0CR78 as seed ortholog is 100%.
Bootstrap support for F2SM83 as seed ortholog is 100%.

Group of orthologs #1066. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:327 T.rubrum:57

Q5KI18              	100.00%		F2SDQ0              	100.00%
Bootstrap support for Q5KI18 as seed ortholog is 100%.
Bootstrap support for F2SDQ0 as seed ortholog is 54%.
Alternative seed ortholog is F2SS53 (57 bits away from this cluster)

Group of orthologs #1067. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:327 T.rubrum:327

Q5KKX2              	100.00%		F2SKQ4              	100.00%
Bootstrap support for Q5KKX2 as seed ortholog is 100%.
Bootstrap support for F2SKQ4 as seed ortholog is 100%.

Group of orthologs #1068. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:327 T.rubrum:201

Q5KHX7              	100.00%		F2SSE7              	100.00%
Bootstrap support for Q5KHX7 as seed ortholog is 100%.
Bootstrap support for F2SSE7 as seed ortholog is 100%.

Group of orthologs #1069. Best score 327 bits
Score difference with first non-orthologous sequence - C.neoformans:327 T.rubrum:327

Q5KJE9              	100.00%		F2SSC5              	100.00%
Bootstrap support for Q5KJE9 as seed ortholog is 100%.
Bootstrap support for F2SSC5 as seed ortholog is 100%.

Group of orthologs #1070. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:326 T.rubrum:39

Q5K705              	100.00%		F2SGC7              	100.00%
Bootstrap support for Q5K705 as seed ortholog is 100%.
Bootstrap support for F2SGC7 as seed ortholog is 78%.

Group of orthologs #1071. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:326 T.rubrum:255

Q5KD68              	100.00%		F2SFG7              	100.00%
Bootstrap support for Q5KD68 as seed ortholog is 100%.
Bootstrap support for F2SFG7 as seed ortholog is 100%.

Group of orthologs #1072. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:326 T.rubrum:326

Q5K7U9              	100.00%		F2STU4              	100.00%
Bootstrap support for Q5K7U9 as seed ortholog is 100%.
Bootstrap support for F2STU4 as seed ortholog is 100%.

Group of orthologs #1073. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:189 T.rubrum:259

Q5KK79              	100.00%		F2SI43              	100.00%
Bootstrap support for Q5KK79 as seed ortholog is 100%.
Bootstrap support for F2SI43 as seed ortholog is 100%.

Group of orthologs #1074. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:235 T.rubrum:326

P0CP70              	100.00%		F2SW44              	100.00%
Bootstrap support for P0CP70 as seed ortholog is 100%.
Bootstrap support for F2SW44 as seed ortholog is 100%.

Group of orthologs #1075. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:326 T.rubrum:326

Q5KJI7              	100.00%		F2SR70              	100.00%
Bootstrap support for Q5KJI7 as seed ortholog is 100%.
Bootstrap support for F2SR70 as seed ortholog is 100%.

Group of orthologs #1076. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:326 T.rubrum:326

Q5KI67              	100.00%		F2ST27              	100.00%
Bootstrap support for Q5KI67 as seed ortholog is 100%.
Bootstrap support for F2ST27 as seed ortholog is 100%.

Group of orthologs #1077. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:326 T.rubrum:326

Q5KGC8              	100.00%		F2SV84              	100.00%
Bootstrap support for Q5KGC8 as seed ortholog is 100%.
Bootstrap support for F2SV84 as seed ortholog is 100%.

Group of orthologs #1078. Best score 326 bits
Score difference with first non-orthologous sequence - C.neoformans:326 T.rubrum:239

Q5KKN5              	100.00%		F2T158              	100.00%
Bootstrap support for Q5KKN5 as seed ortholog is 100%.
Bootstrap support for F2T158 as seed ortholog is 100%.

Group of orthologs #1079. Best score 325 bits
Score difference with first non-orthologous sequence - C.neoformans:325 T.rubrum:257

P0CS46              	100.00%		F2SK41              	100.00%
Bootstrap support for P0CS46 as seed ortholog is 100%.
Bootstrap support for F2SK41 as seed ortholog is 100%.

Group of orthologs #1080. Best score 325 bits
Score difference with first non-orthologous sequence - C.neoformans:166 T.rubrum:176

Q5K8I9              	100.00%		F2SNI8              	100.00%
Bootstrap support for Q5K8I9 as seed ortholog is 100%.
Bootstrap support for F2SNI8 as seed ortholog is 100%.

Group of orthologs #1081. Best score 325 bits
Score difference with first non-orthologous sequence - C.neoformans:68 T.rubrum:155

Q5KC86              	100.00%		F2SQT2              	100.00%
Bootstrap support for Q5KC86 as seed ortholog is 99%.
Bootstrap support for F2SQT2 as seed ortholog is 100%.

Group of orthologs #1082. Best score 325 bits
Score difference with first non-orthologous sequence - C.neoformans:325 T.rubrum:325

Q5K950              	100.00%		F2SU92              	100.00%
Bootstrap support for Q5K950 as seed ortholog is 100%.
Bootstrap support for F2SU92 as seed ortholog is 100%.

Group of orthologs #1083. Best score 325 bits
Score difference with first non-orthologous sequence - C.neoformans:325 T.rubrum:325

Q5KMV8              	100.00%		F2SQM7              	100.00%
Bootstrap support for Q5KMV8 as seed ortholog is 100%.
Bootstrap support for F2SQM7 as seed ortholog is 100%.

Group of orthologs #1084. Best score 324 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubrum:83

Q5K7L4              	100.00%		F2SNP5              	100.00%
Q5KHF5              	61.52%		
Bootstrap support for Q5K7L4 as seed ortholog is 98%.
Bootstrap support for F2SNP5 as seed ortholog is 98%.

Group of orthologs #1085. Best score 324 bits
Score difference with first non-orthologous sequence - C.neoformans:324 T.rubrum:324

Q5KF23              	100.00%		F2SDW6              	100.00%
Bootstrap support for Q5KF23 as seed ortholog is 100%.
Bootstrap support for F2SDW6 as seed ortholog is 100%.

Group of orthologs #1086. Best score 324 bits
Score difference with first non-orthologous sequence - C.neoformans:324 T.rubrum:324

Q5KA01              	100.00%		F2SVF9              	100.00%
Bootstrap support for Q5KA01 as seed ortholog is 100%.
Bootstrap support for F2SVF9 as seed ortholog is 100%.

Group of orthologs #1087. Best score 324 bits
Score difference with first non-orthologous sequence - C.neoformans:324 T.rubrum:324

Q5KEU2              	100.00%		F2SW14              	100.00%
Bootstrap support for Q5KEU2 as seed ortholog is 100%.
Bootstrap support for F2SW14 as seed ortholog is 100%.

Group of orthologs #1088. Best score 323 bits
Score difference with first non-orthologous sequence - C.neoformans:323 T.rubrum:323

P0CM62              	100.00%		F2SI97              	100.00%
Bootstrap support for P0CM62 as seed ortholog is 100%.
Bootstrap support for F2SI97 as seed ortholog is 100%.

Group of orthologs #1089. Best score 323 bits
Score difference with first non-orthologous sequence - C.neoformans:323 T.rubrum:323

Q5KJC1              	100.00%		F2SC01              	100.00%
Bootstrap support for Q5KJC1 as seed ortholog is 100%.
Bootstrap support for F2SC01 as seed ortholog is 100%.

Group of orthologs #1090. Best score 323 bits
Score difference with first non-orthologous sequence - C.neoformans:7 T.rubrum:62

Q5K9X4              	100.00%		F2SME6              	100.00%
Bootstrap support for Q5K9X4 as seed ortholog is 55%.
Alternative seed ortholog is Q5KEI1 (7 bits away from this cluster)
Bootstrap support for F2SME6 as seed ortholog is 93%.

Group of orthologs #1091. Best score 323 bits
Score difference with first non-orthologous sequence - C.neoformans:323 T.rubrum:323

Q5KFC1              	100.00%		F2SM91              	100.00%
Bootstrap support for Q5KFC1 as seed ortholog is 100%.
Bootstrap support for F2SM91 as seed ortholog is 100%.

Group of orthologs #1092. Best score 323 bits
Score difference with first non-orthologous sequence - C.neoformans:323 T.rubrum:323

Q5K902              	100.00%		F2SVC4              	100.00%
Bootstrap support for Q5K902 as seed ortholog is 100%.
Bootstrap support for F2SVC4 as seed ortholog is 100%.

Group of orthologs #1093. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:322 T.rubrum:322

Q5KD38              	100.00%		F2SJE4              	100.00%
Bootstrap support for Q5KD38 as seed ortholog is 100%.
Bootstrap support for F2SJE4 as seed ortholog is 100%.

Group of orthologs #1094. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:322 T.rubrum:322

Q5KGW0              	100.00%		F2SGW9              	100.00%
Bootstrap support for Q5KGW0 as seed ortholog is 100%.
Bootstrap support for F2SGW9 as seed ortholog is 100%.

Group of orthologs #1095. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:214 T.rubrum:209

Q5KCH7              	100.00%		F2SQ65              	100.00%
Bootstrap support for Q5KCH7 as seed ortholog is 100%.
Bootstrap support for F2SQ65 as seed ortholog is 100%.

Group of orthologs #1096. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:322 T.rubrum:322

Q5K9V7              	100.00%		F2SZ03              	100.00%
Bootstrap support for Q5K9V7 as seed ortholog is 100%.
Bootstrap support for F2SZ03 as seed ortholog is 100%.

Group of orthologs #1097. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:322 T.rubrum:322

Q5KDM0              	100.00%		F2SVW8              	100.00%
Bootstrap support for Q5KDM0 as seed ortholog is 100%.
Bootstrap support for F2SVW8 as seed ortholog is 100%.

Group of orthologs #1098. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:322 T.rubrum:322

Q5KJR0              	100.00%		F2SS35              	100.00%
Bootstrap support for Q5KJR0 as seed ortholog is 100%.
Bootstrap support for F2SS35 as seed ortholog is 100%.

Group of orthologs #1099. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:322 T.rubrum:322

Q5KH26              	100.00%		F2SXV4              	100.00%
Bootstrap support for Q5KH26 as seed ortholog is 100%.
Bootstrap support for F2SXV4 as seed ortholog is 100%.

Group of orthologs #1100. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:322 T.rubrum:322

Q5KJZ3              	100.00%		F2SWK2              	100.00%
Bootstrap support for Q5KJZ3 as seed ortholog is 100%.
Bootstrap support for F2SWK2 as seed ortholog is 100%.

Group of orthologs #1101. Best score 322 bits
Score difference with first non-orthologous sequence - C.neoformans:322 T.rubrum:322

Q5KQ60              	100.00%		F2SU24              	100.00%
Bootstrap support for Q5KQ60 as seed ortholog is 100%.
Bootstrap support for F2SU24 as seed ortholog is 100%.

Group of orthologs #1102. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:321 T.rubrum:321

Q5KK81              	100.00%		F2SE25              	100.00%
Bootstrap support for Q5KK81 as seed ortholog is 100%.
Bootstrap support for F2SE25 as seed ortholog is 100%.

Group of orthologs #1103. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:276 T.rubrum:321

Q5K8A5              	100.00%		F2SSI0              	100.00%
Bootstrap support for Q5K8A5 as seed ortholog is 100%.
Bootstrap support for F2SSI0 as seed ortholog is 100%.

Group of orthologs #1104. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:225 T.rubrum:321

Q5KPV3              	100.00%		F2SDP0              	100.00%
Bootstrap support for Q5KPV3 as seed ortholog is 100%.
Bootstrap support for F2SDP0 as seed ortholog is 100%.

Group of orthologs #1105. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:321 T.rubrum:321

Q5K6V3              	100.00%		F2T0F3              	100.00%
Bootstrap support for Q5K6V3 as seed ortholog is 100%.
Bootstrap support for F2T0F3 as seed ortholog is 100%.

Group of orthologs #1106. Best score 321 bits
Score difference with first non-orthologous sequence - C.neoformans:141 T.rubrum:321

Q9HFU4              	100.00%		F2SP97              	100.00%
Bootstrap support for Q9HFU4 as seed ortholog is 99%.
Bootstrap support for F2SP97 as seed ortholog is 100%.

Group of orthologs #1107. Best score 320 bits
Score difference with first non-orthologous sequence - C.neoformans:320 T.rubrum:320

P0CS50              	100.00%		F2SNV9              	100.00%
Bootstrap support for P0CS50 as seed ortholog is 100%.
Bootstrap support for F2SNV9 as seed ortholog is 100%.

Group of orthologs #1108. Best score 320 bits
Score difference with first non-orthologous sequence - C.neoformans:320 T.rubrum:320

Q5KC64              	100.00%		F2SPB7              	100.00%
Bootstrap support for Q5KC64 as seed ortholog is 100%.
Bootstrap support for F2SPB7 as seed ortholog is 100%.

Group of orthologs #1109. Best score 320 bits
Score difference with first non-orthologous sequence - C.neoformans:320 T.rubrum:320

Q5KJJ3              	100.00%		F2SYT8              	100.00%
Bootstrap support for Q5KJJ3 as seed ortholog is 100%.
Bootstrap support for F2SYT8 as seed ortholog is 100%.

Group of orthologs #1110. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:319 T.rubrum:319

Q5K9D4              	100.00%		F2SGG3              	100.00%
Q5K9D8              	41.47%		
Bootstrap support for Q5K9D4 as seed ortholog is 100%.
Bootstrap support for F2SGG3 as seed ortholog is 100%.

Group of orthologs #1111. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:319 T.rubrum:319

Q5KJM4              	100.00%		F2SC97              	100.00%
Bootstrap support for Q5KJM4 as seed ortholog is 100%.
Bootstrap support for F2SC97 as seed ortholog is 100%.

Group of orthologs #1112. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:241 T.rubrum:226

Q5KHD3              	100.00%		F2SF19              	100.00%
Bootstrap support for Q5KHD3 as seed ortholog is 100%.
Bootstrap support for F2SF19 as seed ortholog is 100%.

Group of orthologs #1113. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:319 T.rubrum:319

Q5KEA3              	100.00%		F2SLB4              	100.00%
Bootstrap support for Q5KEA3 as seed ortholog is 100%.
Bootstrap support for F2SLB4 as seed ortholog is 100%.

Group of orthologs #1114. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:242 T.rubrum:319

P0CR30              	100.00%		F2STF6              	100.00%
Bootstrap support for P0CR30 as seed ortholog is 100%.
Bootstrap support for F2STF6 as seed ortholog is 100%.

Group of orthologs #1115. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:25 T.rubrum:100

Q5KEY5              	100.00%		F2T0B5              	100.00%
Bootstrap support for Q5KEY5 as seed ortholog is 67%.
Alternative seed ortholog is Q5K9E7 (25 bits away from this cluster)
Bootstrap support for F2T0B5 as seed ortholog is 97%.

Group of orthologs #1116. Best score 319 bits
Score difference with first non-orthologous sequence - C.neoformans:319 T.rubrum:319

Q5KNI1              	100.00%		F2SVG0              	100.00%
Bootstrap support for Q5KNI1 as seed ortholog is 100%.
Bootstrap support for F2SVG0 as seed ortholog is 100%.

Group of orthologs #1117. Best score 318 bits
Score difference with first non-orthologous sequence - C.neoformans:318 T.rubrum:318

Q5KDI6              	100.00%		F2SKP2              	100.00%
Bootstrap support for Q5KDI6 as seed ortholog is 100%.
Bootstrap support for F2SKP2 as seed ortholog is 100%.

Group of orthologs #1118. Best score 318 bits
Score difference with first non-orthologous sequence - C.neoformans:318 T.rubrum:318

Q5KAH1              	100.00%		F2SWY4              	100.00%
Bootstrap support for Q5KAH1 as seed ortholog is 100%.
Bootstrap support for F2SWY4 as seed ortholog is 100%.

Group of orthologs #1119. Best score 318 bits
Score difference with first non-orthologous sequence - C.neoformans:318 T.rubrum:318

Q5KI91              	100.00%		F2SSE9              	100.00%
Bootstrap support for Q5KI91 as seed ortholog is 100%.
Bootstrap support for F2SSE9 as seed ortholog is 100%.

Group of orthologs #1120. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:317 T.rubrum:317

P0CP80              	100.00%		F2SI49              	100.00%
Bootstrap support for P0CP80 as seed ortholog is 100%.
Bootstrap support for F2SI49 as seed ortholog is 100%.

Group of orthologs #1121. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:317 T.rubrum:226

P0CP74              	100.00%		F2SSS0              	100.00%
Bootstrap support for P0CP74 as seed ortholog is 100%.
Bootstrap support for F2SSS0 as seed ortholog is 99%.

Group of orthologs #1122. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubrum:172

Q5KGY8              	100.00%		F2SIQ3              	100.00%
Bootstrap support for Q5KGY8 as seed ortholog is 97%.
Bootstrap support for F2SIQ3 as seed ortholog is 99%.

Group of orthologs #1123. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:317 T.rubrum:317

Q5KQ96              	100.00%		F2SFW4              	100.00%
Bootstrap support for Q5KQ96 as seed ortholog is 100%.
Bootstrap support for F2SFW4 as seed ortholog is 100%.

Group of orthologs #1124. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:217 T.rubrum:191

Q5K9V2              	100.00%		F2SV30              	100.00%
Bootstrap support for Q5K9V2 as seed ortholog is 100%.
Bootstrap support for F2SV30 as seed ortholog is 100%.

Group of orthologs #1125. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:2 T.rubrum:51

Q5KM52              	100.00%		F2SQA2              	100.00%
Bootstrap support for Q5KM52 as seed ortholog is 28%.
Alternative seed ortholog is Q5KQ80 (2 bits away from this cluster)
Bootstrap support for F2SQA2 as seed ortholog is 90%.

Group of orthologs #1126. Best score 317 bits
Score difference with first non-orthologous sequence - C.neoformans:317 T.rubrum:317

Q5KKH6              	100.00%		F2SY15              	100.00%
Bootstrap support for Q5KKH6 as seed ortholog is 100%.
Bootstrap support for F2SY15 as seed ortholog is 100%.

Group of orthologs #1127. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:316 T.rubrum:316

Q5KFW9              	100.00%		F2SDW8              	100.00%
                    	       		F2SW45              	39.65%
Bootstrap support for Q5KFW9 as seed ortholog is 100%.
Bootstrap support for F2SDW8 as seed ortholog is 100%.

Group of orthologs #1128. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:316 T.rubrum:230

Q5K8Z0              	100.00%		F2SEM3              	100.00%
Bootstrap support for Q5K8Z0 as seed ortholog is 100%.
Bootstrap support for F2SEM3 as seed ortholog is 100%.

Group of orthologs #1129. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:316 T.rubrum:316

Q5K9Y4              	100.00%		F2SQ89              	100.00%
Bootstrap support for Q5K9Y4 as seed ortholog is 100%.
Bootstrap support for F2SQ89 as seed ortholog is 100%.

Group of orthologs #1130. Best score 316 bits
Score difference with first non-orthologous sequence - C.neoformans:316 T.rubrum:316

Q5KK71              	100.00%		F2SJE5              	100.00%
Bootstrap support for Q5KK71 as seed ortholog is 100%.
Bootstrap support for F2SJE5 as seed ortholog is 100%.

Group of orthologs #1131. Best score 315 bits
Score difference with first non-orthologous sequence - C.neoformans:315 T.rubrum:315

Q5KD00              	100.00%		F2SM95              	100.00%
Bootstrap support for Q5KD00 as seed ortholog is 100%.
Bootstrap support for F2SM95 as seed ortholog is 100%.

Group of orthologs #1132. Best score 315 bits
Score difference with first non-orthologous sequence - C.neoformans:315 T.rubrum:315

Q5KA28              	100.00%		F2SR97              	100.00%
Bootstrap support for Q5KA28 as seed ortholog is 100%.
Bootstrap support for F2SR97 as seed ortholog is 100%.

Group of orthologs #1133. Best score 315 bits
Score difference with first non-orthologous sequence - C.neoformans:315 T.rubrum:315

Q5KKR0              	100.00%		F2SKA0              	100.00%
Bootstrap support for Q5KKR0 as seed ortholog is 100%.
Bootstrap support for F2SKA0 as seed ortholog is 100%.

Group of orthologs #1134. Best score 315 bits
Score difference with first non-orthologous sequence - C.neoformans:315 T.rubrum:315

Q5KAB1              	100.00%		F2SV12              	100.00%
Bootstrap support for Q5KAB1 as seed ortholog is 100%.
Bootstrap support for F2SV12 as seed ortholog is 100%.

Group of orthologs #1135. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:314 T.rubrum:314

Q5KFC5              	100.00%		F2SFU4              	100.00%
Bootstrap support for Q5KFC5 as seed ortholog is 100%.
Bootstrap support for F2SFU4 as seed ortholog is 100%.

Group of orthologs #1136. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:314 T.rubrum:314

Q5KBR5              	100.00%		F2SNI6              	100.00%
Bootstrap support for Q5KBR5 as seed ortholog is 100%.
Bootstrap support for F2SNI6 as seed ortholog is 100%.

Group of orthologs #1137. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:162 T.rubrum:233

Q5KNZ3              	100.00%		F2SCY4              	100.00%
Bootstrap support for Q5KNZ3 as seed ortholog is 99%.
Bootstrap support for F2SCY4 as seed ortholog is 100%.

Group of orthologs #1138. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:314 T.rubrum:314

Q5KIJ7              	100.00%		F2SIF2              	100.00%
Bootstrap support for Q5KIJ7 as seed ortholog is 100%.
Bootstrap support for F2SIF2 as seed ortholog is 100%.

Group of orthologs #1139. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:314 T.rubrum:314

P0CP54              	100.00%		F2SW32              	100.00%
Bootstrap support for P0CP54 as seed ortholog is 100%.
Bootstrap support for F2SW32 as seed ortholog is 100%.

Group of orthologs #1140. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:314 T.rubrum:314

Q5KKX6              	100.00%		F2SUD9              	100.00%
Bootstrap support for Q5KKX6 as seed ortholog is 100%.
Bootstrap support for F2SUD9 as seed ortholog is 100%.

Group of orthologs #1141. Best score 314 bits
Score difference with first non-orthologous sequence - C.neoformans:314 T.rubrum:314

Q5KGE3              	100.00%		F2SZL7              	100.00%
Bootstrap support for Q5KGE3 as seed ortholog is 100%.
Bootstrap support for F2SZL7 as seed ortholog is 100%.

Group of orthologs #1142. Best score 313 bits
Score difference with first non-orthologous sequence - C.neoformans:313 T.rubrum:313

Q5KAX6              	100.00%		F2SJQ4              	100.00%
Bootstrap support for Q5KAX6 as seed ortholog is 100%.
Bootstrap support for F2SJQ4 as seed ortholog is 100%.

Group of orthologs #1143. Best score 313 bits
Score difference with first non-orthologous sequence - C.neoformans:313 T.rubrum:313

Q5KGK6              	100.00%		F2SF12              	100.00%
Bootstrap support for Q5KGK6 as seed ortholog is 100%.
Bootstrap support for F2SF12 as seed ortholog is 100%.

Group of orthologs #1144. Best score 313 bits
Score difference with first non-orthologous sequence - C.neoformans:313 T.rubrum:313

Q5KLL2              	100.00%		F2SFM5              	100.00%
Bootstrap support for Q5KLL2 as seed ortholog is 100%.
Bootstrap support for F2SFM5 as seed ortholog is 100%.

Group of orthologs #1145. Best score 313 bits
Score difference with first non-orthologous sequence - C.neoformans:313 T.rubrum:313

Q5KEX2              	100.00%		F2SRP1              	100.00%
Bootstrap support for Q5KEX2 as seed ortholog is 100%.
Bootstrap support for F2SRP1 as seed ortholog is 100%.

Group of orthologs #1146. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:312 T.rubrum:312

Q5K9K4              	100.00%		F2SCD0              	100.00%
Bootstrap support for Q5K9K4 as seed ortholog is 100%.
Bootstrap support for F2SCD0 as seed ortholog is 100%.

Group of orthologs #1147. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:312 T.rubrum:312

Q5KBQ7              	100.00%		F2SHH8              	100.00%
Bootstrap support for Q5KBQ7 as seed ortholog is 100%.
Bootstrap support for F2SHH8 as seed ortholog is 100%.

Group of orthologs #1148. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:312 T.rubrum:312

Q5KFG2              	100.00%		F2SLU8              	100.00%
Bootstrap support for Q5KFG2 as seed ortholog is 100%.
Bootstrap support for F2SLU8 as seed ortholog is 100%.

Group of orthologs #1149. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:312 T.rubrum:213

Q5KG36              	100.00%		F2T109              	100.00%
Bootstrap support for Q5KG36 as seed ortholog is 100%.
Bootstrap support for F2T109 as seed ortholog is 100%.

Group of orthologs #1150. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:312 T.rubrum:312

Q5KJ09              	100.00%		F2SYV3              	100.00%
Bootstrap support for Q5KJ09 as seed ortholog is 100%.
Bootstrap support for F2SYV3 as seed ortholog is 100%.

Group of orthologs #1151. Best score 312 bits
Score difference with first non-orthologous sequence - C.neoformans:312 T.rubrum:312

Q5KK42              	100.00%		F2T168              	100.00%
Bootstrap support for Q5KK42 as seed ortholog is 100%.
Bootstrap support for F2T168 as seed ortholog is 100%.

Group of orthologs #1152. Best score 311 bits
Score difference with first non-orthologous sequence - C.neoformans:22 T.rubrum:170

Q5KN11              	100.00%		F2SWQ2              	100.00%
                    	       		F2SXK1              	9.86%
Bootstrap support for Q5KN11 as seed ortholog is 76%.
Bootstrap support for F2SWQ2 as seed ortholog is 100%.

Group of orthologs #1153. Best score 311 bits
Score difference with first non-orthologous sequence - C.neoformans:311 T.rubrum:311

Q5KFU4              	100.00%		F2SHG6              	100.00%
Bootstrap support for Q5KFU4 as seed ortholog is 100%.
Bootstrap support for F2SHG6 as seed ortholog is 100%.

Group of orthologs #1154. Best score 311 bits
Score difference with first non-orthologous sequence - C.neoformans:311 T.rubrum:311

Q5KGF3              	100.00%		F2SMV0              	100.00%
Bootstrap support for Q5KGF3 as seed ortholog is 100%.
Bootstrap support for F2SMV0 as seed ortholog is 100%.

Group of orthologs #1155. Best score 311 bits
Score difference with first non-orthologous sequence - C.neoformans:311 T.rubrum:311

Q5KEV1              	100.00%		F2STR8              	100.00%
Bootstrap support for Q5KEV1 as seed ortholog is 100%.
Bootstrap support for F2STR8 as seed ortholog is 100%.

Group of orthologs #1156. Best score 311 bits
Score difference with first non-orthologous sequence - C.neoformans:311 T.rubrum:311

Q5KGD8              	100.00%		F2SWE4              	100.00%
Bootstrap support for Q5KGD8 as seed ortholog is 100%.
Bootstrap support for F2SWE4 as seed ortholog is 100%.

Group of orthologs #1157. Best score 311 bits
Score difference with first non-orthologous sequence - C.neoformans:311 T.rubrum:311

Q5KIB9              	100.00%		F2SUZ1              	100.00%
Bootstrap support for Q5KIB9 as seed ortholog is 100%.
Bootstrap support for F2SUZ1 as seed ortholog is 100%.

Group of orthologs #1158. Best score 310 bits
Score difference with first non-orthologous sequence - C.neoformans:310 T.rubrum:310

Q5KNK5              	100.00%		F2SCU1              	100.00%
Bootstrap support for Q5KNK5 as seed ortholog is 100%.
Bootstrap support for F2SCU1 as seed ortholog is 100%.

Group of orthologs #1159. Best score 310 bits
Score difference with first non-orthologous sequence - C.neoformans:310 T.rubrum:310

Q5KK78              	100.00%		F2SHU1              	100.00%
Bootstrap support for Q5KK78 as seed ortholog is 100%.
Bootstrap support for F2SHU1 as seed ortholog is 100%.

Group of orthologs #1160. Best score 310 bits
Score difference with first non-orthologous sequence - C.neoformans:310 T.rubrum:310

Q5K9U2              	100.00%		F2SV87              	100.00%
Bootstrap support for Q5K9U2 as seed ortholog is 100%.
Bootstrap support for F2SV87 as seed ortholog is 100%.

Group of orthologs #1161. Best score 310 bits
Score difference with first non-orthologous sequence - C.neoformans:150 T.rubrum:266

P0CM16              	100.00%		F2SZL5              	100.00%
Bootstrap support for P0CM16 as seed ortholog is 100%.
Bootstrap support for F2SZL5 as seed ortholog is 100%.

Group of orthologs #1162. Best score 310 bits
Score difference with first non-orthologous sequence - C.neoformans:310 T.rubrum:310

Q5KK45              	100.00%		F2SYF6              	100.00%
Bootstrap support for Q5KK45 as seed ortholog is 100%.
Bootstrap support for F2SYF6 as seed ortholog is 100%.

Group of orthologs #1163. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:253 T.rubrum:309

Q5KNE6              	100.00%		F2SQY7              	100.00%
Q5K809              	45.86%		
Bootstrap support for Q5KNE6 as seed ortholog is 100%.
Bootstrap support for F2SQY7 as seed ortholog is 100%.

Group of orthologs #1164. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 T.rubrum:309

Q5KAE4              	100.00%		F2SHJ7              	100.00%
Bootstrap support for Q5KAE4 as seed ortholog is 100%.
Bootstrap support for F2SHJ7 as seed ortholog is 100%.

Group of orthologs #1165. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 T.rubrum:309

Q5KF50              	100.00%		F2SET7              	100.00%
Bootstrap support for Q5KF50 as seed ortholog is 100%.
Bootstrap support for F2SET7 as seed ortholog is 100%.

Group of orthologs #1166. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 T.rubrum:144

Q5KM78              	100.00%		F2SDZ5              	100.00%
Bootstrap support for Q5KM78 as seed ortholog is 100%.
Bootstrap support for F2SDZ5 as seed ortholog is 99%.

Group of orthologs #1167. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 T.rubrum:309

Q5KEJ4              	100.00%		F2SLJ6              	100.00%
Bootstrap support for Q5KEJ4 as seed ortholog is 100%.
Bootstrap support for F2SLJ6 as seed ortholog is 100%.

Group of orthologs #1168. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 T.rubrum:309

P0CN64              	100.00%		F2SVC5              	100.00%
Bootstrap support for P0CN64 as seed ortholog is 100%.
Bootstrap support for F2SVC5 as seed ortholog is 100%.

Group of orthologs #1169. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 T.rubrum:309

Q5KHZ3              	100.00%		F2SXK0              	100.00%
Bootstrap support for Q5KHZ3 as seed ortholog is 100%.
Bootstrap support for F2SXK0 as seed ortholog is 100%.

Group of orthologs #1170. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 T.rubrum:309

Q5KIJ1              	100.00%		F2SX87              	100.00%
Bootstrap support for Q5KIJ1 as seed ortholog is 100%.
Bootstrap support for F2SX87 as seed ortholog is 100%.

Group of orthologs #1171. Best score 309 bits
Score difference with first non-orthologous sequence - C.neoformans:309 T.rubrum:309

Q5KLW0              	100.00%		F2SWU2              	100.00%
Bootstrap support for Q5KLW0 as seed ortholog is 100%.
Bootstrap support for F2SWU2 as seed ortholog is 100%.

Group of orthologs #1172. Best score 308 bits
Score difference with first non-orthologous sequence - C.neoformans:308 T.rubrum:308

F5H8V6              	100.00%		F2SUC2              	100.00%
Bootstrap support for F5H8V6 as seed ortholog is 100%.
Bootstrap support for F2SUC2 as seed ortholog is 100%.

Group of orthologs #1173. Best score 308 bits
Score difference with first non-orthologous sequence - C.neoformans:174 T.rubrum:308

Q5KPE4              	100.00%		F2SS37              	100.00%
Bootstrap support for Q5KPE4 as seed ortholog is 88%.
Bootstrap support for F2SS37 as seed ortholog is 100%.

Group of orthologs #1174. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:173 T.rubrum:149

P0CQ02              	100.00%		F2SC48              	100.00%
Bootstrap support for P0CQ02 as seed ortholog is 99%.
Bootstrap support for F2SC48 as seed ortholog is 99%.

Group of orthologs #1175. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:124 T.rubrum:160

P0CR02              	100.00%		F2SFF3              	100.00%
Bootstrap support for P0CR02 as seed ortholog is 99%.
Bootstrap support for F2SFF3 as seed ortholog is 99%.

Group of orthologs #1176. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:307 T.rubrum:307

Q5K777              	100.00%		F2SK82              	100.00%
Bootstrap support for Q5K777 as seed ortholog is 100%.
Bootstrap support for F2SK82 as seed ortholog is 100%.

Group of orthologs #1177. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:307 T.rubrum:307

Q5K7N7              	100.00%		F2SLH1              	100.00%
Bootstrap support for Q5K7N7 as seed ortholog is 100%.
Bootstrap support for F2SLH1 as seed ortholog is 100%.

Group of orthologs #1178. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:307 T.rubrum:307

Q5KAQ7              	100.00%		F2SPS4              	100.00%
Bootstrap support for Q5KAQ7 as seed ortholog is 100%.
Bootstrap support for F2SPS4 as seed ortholog is 100%.

Group of orthologs #1179. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:307 T.rubrum:244

Q5KN69              	100.00%		F2SHX5              	100.00%
Bootstrap support for Q5KN69 as seed ortholog is 100%.
Bootstrap support for F2SHX5 as seed ortholog is 100%.

Group of orthologs #1180. Best score 307 bits
Score difference with first non-orthologous sequence - C.neoformans:307 T.rubrum:307

Q5KHU6              	100.00%		F2SUA8              	100.00%
Bootstrap support for Q5KHU6 as seed ortholog is 100%.
Bootstrap support for F2SUA8 as seed ortholog is 100%.

Group of orthologs #1181. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 T.rubrum:306

Q5KC89              	100.00%		F2SH40              	100.00%
Bootstrap support for Q5KC89 as seed ortholog is 100%.
Bootstrap support for F2SH40 as seed ortholog is 100%.

Group of orthologs #1182. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubrum:124

Q5KBU7              	100.00%		F2SLX9              	100.00%
Bootstrap support for Q5KBU7 as seed ortholog is 99%.
Bootstrap support for F2SLX9 as seed ortholog is 99%.

Group of orthologs #1183. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 T.rubrum:248

Q5KIV0              	100.00%		F2SGB1              	100.00%
Bootstrap support for Q5KIV0 as seed ortholog is 100%.
Bootstrap support for F2SGB1 as seed ortholog is 100%.

Group of orthologs #1184. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 T.rubrum:306

Q5KFD9              	100.00%		F2SKX5              	100.00%
Bootstrap support for Q5KFD9 as seed ortholog is 100%.
Bootstrap support for F2SKX5 as seed ortholog is 100%.

Group of orthologs #1185. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 T.rubrum:306

Q5KN85              	100.00%		F2SM78              	100.00%
Bootstrap support for Q5KN85 as seed ortholog is 100%.
Bootstrap support for F2SM78 as seed ortholog is 100%.

Group of orthologs #1186. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 T.rubrum:306

Q5KGJ7              	100.00%		F2SXS4              	100.00%
Bootstrap support for Q5KGJ7 as seed ortholog is 100%.
Bootstrap support for F2SXS4 as seed ortholog is 100%.

Group of orthologs #1187. Best score 306 bits
Score difference with first non-orthologous sequence - C.neoformans:306 T.rubrum:306

Q5KNB0              	100.00%		F2SS36              	100.00%
Bootstrap support for Q5KNB0 as seed ortholog is 100%.
Bootstrap support for F2SS36 as seed ortholog is 100%.

Group of orthologs #1188. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 T.rubrum:305

Q5KCS1              	100.00%		F2SF08              	100.00%
Bootstrap support for Q5KCS1 as seed ortholog is 100%.
Bootstrap support for F2SF08 as seed ortholog is 100%.

Group of orthologs #1189. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 T.rubrum:132

Q5KAH9              	100.00%		F2SKU4              	100.00%
Bootstrap support for Q5KAH9 as seed ortholog is 100%.
Bootstrap support for F2SKU4 as seed ortholog is 99%.

Group of orthologs #1190. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 T.rubrum:305

Q5KF51              	100.00%		F2SHZ2              	100.00%
Bootstrap support for Q5KF51 as seed ortholog is 100%.
Bootstrap support for F2SHZ2 as seed ortholog is 100%.

Group of orthologs #1191. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 T.rubrum:305

Q5KIW9              	100.00%		F2SH61              	100.00%
Bootstrap support for Q5KIW9 as seed ortholog is 100%.
Bootstrap support for F2SH61 as seed ortholog is 100%.

Group of orthologs #1192. Best score 305 bits
Score difference with first non-orthologous sequence - C.neoformans:305 T.rubrum:305

Q5KJD4              	100.00%		F2STK3              	100.00%
Bootstrap support for Q5KJD4 as seed ortholog is 100%.
Bootstrap support for F2STK3 as seed ortholog is 100%.

Group of orthologs #1193. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:304 T.rubrum:67

Q5KDN4              	100.00%		F2SRV4              	100.00%
                    	       		F2SBM0              	29.71%
                    	       		F2SES3              	25.85%
Bootstrap support for Q5KDN4 as seed ortholog is 100%.
Bootstrap support for F2SRV4 as seed ortholog is 89%.

Group of orthologs #1194. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:304 T.rubrum:304

Q5K8G1              	100.00%		F2SKD2              	100.00%
Bootstrap support for Q5K8G1 as seed ortholog is 100%.
Bootstrap support for F2SKD2 as seed ortholog is 100%.

Group of orthologs #1195. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:188 T.rubrum:94

Q5KF54              	100.00%		F2SMQ0              	100.00%
Bootstrap support for Q5KF54 as seed ortholog is 100%.
Bootstrap support for F2SMQ0 as seed ortholog is 99%.

Group of orthologs #1196. Best score 304 bits
Score difference with first non-orthologous sequence - C.neoformans:304 T.rubrum:304

Q5KHK1              	100.00%		F2SQY3              	100.00%
Bootstrap support for Q5KHK1 as seed ortholog is 100%.
Bootstrap support for F2SQY3 as seed ortholog is 100%.

Group of orthologs #1197. Best score 303 bits
Score difference with first non-orthologous sequence - C.neoformans:303 T.rubrum:303

P0CP56              	100.00%		F2SCN1              	100.00%
Bootstrap support for P0CP56 as seed ortholog is 100%.
Bootstrap support for F2SCN1 as seed ortholog is 100%.

Group of orthologs #1198. Best score 303 bits
Score difference with first non-orthologous sequence - C.neoformans:303 T.rubrum:151

Q5KPB4              	100.00%		F2SC69              	100.00%
Bootstrap support for Q5KPB4 as seed ortholog is 100%.
Bootstrap support for F2SC69 as seed ortholog is 99%.

Group of orthologs #1199. Best score 303 bits
Score difference with first non-orthologous sequence - C.neoformans:303 T.rubrum:303

Q5KH37              	100.00%		F2SLT2              	100.00%
Bootstrap support for Q5KH37 as seed ortholog is 100%.
Bootstrap support for F2SLT2 as seed ortholog is 100%.

Group of orthologs #1200. Best score 303 bits
Score difference with first non-orthologous sequence - C.neoformans:303 T.rubrum:303

Q5KKY7              	100.00%		F2SQ93              	100.00%
Bootstrap support for Q5KKY7 as seed ortholog is 100%.
Bootstrap support for F2SQ93 as seed ortholog is 100%.

Group of orthologs #1201. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:88 T.rubrum:67

Q5K7N1              	100.00%		F2SJL5              	100.00%
                    	       		F2SCX5              	31.20%
Bootstrap support for Q5K7N1 as seed ortholog is 98%.
Bootstrap support for F2SJL5 as seed ortholog is 94%.

Group of orthologs #1202. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 T.rubrum:302

Q5K7E0              	100.00%		F2ST44              	100.00%
Bootstrap support for Q5K7E0 as seed ortholog is 100%.
Bootstrap support for F2ST44 as seed ortholog is 100%.

Group of orthologs #1203. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 T.rubrum:302

Q5KP66              	100.00%		F2SG41              	100.00%
Bootstrap support for Q5KP66 as seed ortholog is 100%.
Bootstrap support for F2SG41 as seed ortholog is 100%.

Group of orthologs #1204. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 T.rubrum:302

Q5KA31              	100.00%		F2SX18              	100.00%
Bootstrap support for Q5KA31 as seed ortholog is 100%.
Bootstrap support for F2SX18 as seed ortholog is 100%.

Group of orthologs #1205. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:302 T.rubrum:302

Q5K9W9              	100.00%		F2SZQ1              	100.00%
Bootstrap support for Q5K9W9 as seed ortholog is 100%.
Bootstrap support for F2SZQ1 as seed ortholog is 100%.

Group of orthologs #1206. Best score 302 bits
Score difference with first non-orthologous sequence - C.neoformans:201 T.rubrum:228

Q5KKM2              	100.00%		F2SXQ0              	100.00%
Bootstrap support for Q5KKM2 as seed ortholog is 100%.
Bootstrap support for F2SXQ0 as seed ortholog is 100%.

Group of orthologs #1207. Best score 301 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubrum:301

Q5KJQ5              	100.00%		F2SZV0              	100.00%
Q5K7H4              	30.63%		
Bootstrap support for Q5KJQ5 as seed ortholog is 97%.
Bootstrap support for F2SZV0 as seed ortholog is 100%.

Group of orthologs #1208. Best score 301 bits
Score difference with first non-orthologous sequence - C.neoformans:301 T.rubrum:171

P0CM72              	100.00%		F2SV70              	100.00%
Bootstrap support for P0CM72 as seed ortholog is 100%.
Bootstrap support for F2SV70 as seed ortholog is 99%.

Group of orthologs #1209. Best score 301 bits
Score difference with first non-orthologous sequence - C.neoformans:301 T.rubrum:301

Q5KJJ9              	100.00%		F2SPD7              	100.00%
Bootstrap support for Q5KJJ9 as seed ortholog is 100%.
Bootstrap support for F2SPD7 as seed ortholog is 100%.

Group of orthologs #1210. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 T.rubrum:300

Q5KMH8              	100.00%		F2SSN0              	100.00%
                    	       		F2SY37              	11.41%
                    	       		F2SZJ9              	5.09%
Bootstrap support for Q5KMH8 as seed ortholog is 100%.
Bootstrap support for F2SSN0 as seed ortholog is 100%.

Group of orthologs #1211. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:161 T.rubrum:186

Q5K833              	100.00%		F2SDG0              	100.00%
Q5K840              	75.82%		
Bootstrap support for Q5K833 as seed ortholog is 99%.
Bootstrap support for F2SDG0 as seed ortholog is 99%.

Group of orthologs #1212. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 T.rubrum:92

Q5K6U3              	100.00%		F2SF86              	100.00%
                    	       		F2SSA1              	33.29%
Bootstrap support for Q5K6U3 as seed ortholog is 100%.
Bootstrap support for F2SF86 as seed ortholog is 96%.

Group of orthologs #1213. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubrum:172

Q5K6Z2              	100.00%		F2SHH1              	100.00%
Bootstrap support for Q5K6Z2 as seed ortholog is 99%.
Bootstrap support for F2SHH1 as seed ortholog is 100%.

Group of orthologs #1214. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 T.rubrum:97

Q5KEW3              	100.00%		F2SCZ6              	100.00%
Bootstrap support for Q5KEW3 as seed ortholog is 100%.
Bootstrap support for F2SCZ6 as seed ortholog is 93%.

Group of orthologs #1215. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 T.rubrum:300

Q5KLK7              	100.00%		F2SNL1              	100.00%
Bootstrap support for Q5KLK7 as seed ortholog is 100%.
Bootstrap support for F2SNL1 as seed ortholog is 100%.

Group of orthologs #1216. Best score 300 bits
Score difference with first non-orthologous sequence - C.neoformans:300 T.rubrum:300

Q5KG94              	100.00%		F2SWM4              	100.00%
Bootstrap support for Q5KG94 as seed ortholog is 100%.
Bootstrap support for F2SWM4 as seed ortholog is 100%.

Group of orthologs #1217. Best score 299 bits
Score difference with first non-orthologous sequence - C.neoformans:299 T.rubrum:225

Q5KKP1              	100.00%		F2SHL8              	100.00%
Bootstrap support for Q5KKP1 as seed ortholog is 100%.
Bootstrap support for F2SHL8 as seed ortholog is 100%.

Group of orthologs #1218. Best score 299 bits
Score difference with first non-orthologous sequence - C.neoformans:299 T.rubrum:299

Q5K947              	100.00%		F2SWW9              	100.00%
Bootstrap support for Q5K947 as seed ortholog is 100%.
Bootstrap support for F2SWW9 as seed ortholog is 100%.

Group of orthologs #1219. Best score 299 bits
Score difference with first non-orthologous sequence - C.neoformans:299 T.rubrum:299

Q5KNL7              	100.00%		F2SK52              	100.00%
Bootstrap support for Q5KNL7 as seed ortholog is 100%.
Bootstrap support for F2SK52 as seed ortholog is 100%.

Group of orthologs #1220. Best score 299 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubrum:75

Q5KDV8              	100.00%		F2SYC1              	100.00%
Bootstrap support for Q5KDV8 as seed ortholog is 100%.
Bootstrap support for F2SYC1 as seed ortholog is 99%.

Group of orthologs #1221. Best score 299 bits
Score difference with first non-orthologous sequence - C.neoformans:299 T.rubrum:299

Q5KEZ6              	100.00%		F2SY00              	100.00%
Bootstrap support for Q5KEZ6 as seed ortholog is 100%.
Bootstrap support for F2SY00 as seed ortholog is 100%.

Group of orthologs #1222. Best score 299 bits
Score difference with first non-orthologous sequence - C.neoformans:299 T.rubrum:299

Q5KQ34              	100.00%		F2SSA7              	100.00%
Bootstrap support for Q5KQ34 as seed ortholog is 100%.
Bootstrap support for F2SSA7 as seed ortholog is 100%.

Group of orthologs #1223. Best score 298 bits
Score difference with first non-orthologous sequence - C.neoformans:105 T.rubrum:206

Q5K6V5              	100.00%		F2SH45              	100.00%
Bootstrap support for Q5K6V5 as seed ortholog is 99%.
Bootstrap support for F2SH45 as seed ortholog is 100%.

Group of orthologs #1224. Best score 298 bits
Score difference with first non-orthologous sequence - C.neoformans:298 T.rubrum:298

P0CS26              	100.00%		F2SM77              	100.00%
Bootstrap support for P0CS26 as seed ortholog is 100%.
Bootstrap support for F2SM77 as seed ortholog is 100%.

Group of orthologs #1225. Best score 298 bits
Score difference with first non-orthologous sequence - C.neoformans:298 T.rubrum:214

P0CR62              	100.00%		F2SY57              	100.00%
Bootstrap support for P0CR62 as seed ortholog is 100%.
Bootstrap support for F2SY57 as seed ortholog is 100%.

Group of orthologs #1226. Best score 298 bits
Score difference with first non-orthologous sequence - C.neoformans:298 T.rubrum:298

Q5KMJ6              	100.00%		F2SPQ4              	100.00%
Bootstrap support for Q5KMJ6 as seed ortholog is 100%.
Bootstrap support for F2SPQ4 as seed ortholog is 100%.

Group of orthologs #1227. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:85 T.rubrum:44

Q5KAA2              	100.00%		F2SLS8              	100.00%
                    	       		F2SF98              	14.99%
                    	       		F2SWD1              	6.00%
                    	       		F2SKZ7              	5.64%
Bootstrap support for Q5KAA2 as seed ortholog is 98%.
Bootstrap support for F2SLS8 as seed ortholog is 86%.

Group of orthologs #1228. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:297 T.rubrum:297

Q5K8U2              	100.00%		F2SS39              	100.00%
Bootstrap support for Q5K8U2 as seed ortholog is 100%.
Bootstrap support for F2SS39 as seed ortholog is 100%.

Group of orthologs #1229. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:297 T.rubrum:297

Q5K9B8              	100.00%		F2SSU2              	100.00%
Bootstrap support for Q5K9B8 as seed ortholog is 100%.
Bootstrap support for F2SSU2 as seed ortholog is 100%.

Group of orthologs #1230. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:297 T.rubrum:210

Q5KAT8              	100.00%		F2SSY5              	100.00%
Bootstrap support for Q5KAT8 as seed ortholog is 100%.
Bootstrap support for F2SSY5 as seed ortholog is 99%.

Group of orthologs #1231. Best score 297 bits
Score difference with first non-orthologous sequence - C.neoformans:297 T.rubrum:297

Q5KGW5              	100.00%		F2SNG5              	100.00%
Bootstrap support for Q5KGW5 as seed ortholog is 100%.
Bootstrap support for F2SNG5 as seed ortholog is 100%.

Group of orthologs #1232. Best score 296 bits
Score difference with first non-orthologous sequence - C.neoformans:138 T.rubrum:254

Q5K880              	100.00%		F2SDD7              	100.00%
Bootstrap support for Q5K880 as seed ortholog is 100%.
Bootstrap support for F2SDD7 as seed ortholog is 100%.

Group of orthologs #1233. Best score 296 bits
Score difference with first non-orthologous sequence - C.neoformans:195 T.rubrum:296

Q5KGU7              	100.00%		F2SD60              	100.00%
Bootstrap support for Q5KGU7 as seed ortholog is 99%.
Bootstrap support for F2SD60 as seed ortholog is 100%.

Group of orthologs #1234. Best score 296 bits
Score difference with first non-orthologous sequence - C.neoformans:296 T.rubrum:296

Q5KEJ6              	100.00%		F2SUF2              	100.00%
Bootstrap support for Q5KEJ6 as seed ortholog is 100%.
Bootstrap support for F2SUF2 as seed ortholog is 100%.

Group of orthologs #1235. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 T.rubrum:295

Q5KAT1              	100.00%		F2SF83              	100.00%
Q5KAU3              	100.00%		F2SSR3              	100.00%
                    	       		F2SZY7              	6.05%
Bootstrap support for Q5KAT1 as seed ortholog is 100%.
Bootstrap support for Q5KAU3 as seed ortholog is 100%.
Bootstrap support for F2SF83 as seed ortholog is 100%.
Bootstrap support for F2SSR3 as seed ortholog is 100%.

Group of orthologs #1236. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:2 T.rubrum:115

Q5K854              	100.00%		F2SH18              	100.00%
Bootstrap support for Q5K854 as seed ortholog is 52%.
Alternative seed ortholog is Q5KJY2 (2 bits away from this cluster)
Bootstrap support for F2SH18 as seed ortholog is 100%.

Group of orthologs #1237. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:223 T.rubrum:218

P0CS42              	100.00%		F2SP61              	100.00%
Bootstrap support for P0CS42 as seed ortholog is 99%.
Bootstrap support for F2SP61 as seed ortholog is 99%.

Group of orthologs #1238. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 T.rubrum:295

Q5KFL4              	100.00%		F2SH16              	100.00%
Bootstrap support for Q5KFL4 as seed ortholog is 100%.
Bootstrap support for F2SH16 as seed ortholog is 100%.

Group of orthologs #1239. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 T.rubrum:295

Q5K8P0              	100.00%		F2STR2              	100.00%
Bootstrap support for Q5K8P0 as seed ortholog is 100%.
Bootstrap support for F2STR2 as seed ortholog is 100%.

Group of orthologs #1240. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 T.rubrum:295

Q5KAA5              	100.00%		F2SVP3              	100.00%
Bootstrap support for Q5KAA5 as seed ortholog is 100%.
Bootstrap support for F2SVP3 as seed ortholog is 100%.

Group of orthologs #1241. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:199 T.rubrum:295

Q5KA61              	100.00%		F2SXN8              	100.00%
Bootstrap support for Q5KA61 as seed ortholog is 99%.
Bootstrap support for F2SXN8 as seed ortholog is 100%.

Group of orthologs #1242. Best score 295 bits
Score difference with first non-orthologous sequence - C.neoformans:295 T.rubrum:295

Q5KH67              	100.00%		F2SZJ4              	100.00%
Bootstrap support for Q5KH67 as seed ortholog is 100%.
Bootstrap support for F2SZJ4 as seed ortholog is 100%.

Group of orthologs #1243. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:244 T.rubrum:294

Q5KES1              	100.00%		F2SWB8              	100.00%
                    	       		F2SZS0              	13.64%
Bootstrap support for Q5KES1 as seed ortholog is 100%.
Bootstrap support for F2SWB8 as seed ortholog is 100%.

Group of orthologs #1244. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubrum:294

Q5KFR5              	100.00%		F2SDD3              	100.00%
Bootstrap support for Q5KFR5 as seed ortholog is 99%.
Bootstrap support for F2SDD3 as seed ortholog is 100%.

Group of orthologs #1245. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 T.rubrum:294

Q5KFN7              	100.00%		F2SFH7              	100.00%
Bootstrap support for Q5KFN7 as seed ortholog is 100%.
Bootstrap support for F2SFH7 as seed ortholog is 100%.

Group of orthologs #1246. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 T.rubrum:168

Q5KI08              	100.00%		F2SIJ1              	100.00%
Bootstrap support for Q5KI08 as seed ortholog is 100%.
Bootstrap support for F2SIJ1 as seed ortholog is 99%.

Group of orthologs #1247. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 T.rubrum:202

Q5KH36              	100.00%		F2SLE3              	100.00%
Bootstrap support for Q5KH36 as seed ortholog is 100%.
Bootstrap support for F2SLE3 as seed ortholog is 99%.

Group of orthologs #1248. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 T.rubrum:294

Q5KAW7              	100.00%		F2SXT2              	100.00%
Bootstrap support for Q5KAW7 as seed ortholog is 100%.
Bootstrap support for F2SXT2 as seed ortholog is 100%.

Group of orthologs #1249. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 T.rubrum:294

Q5KL66              	100.00%		F2SV48              	100.00%
Bootstrap support for Q5KL66 as seed ortholog is 100%.
Bootstrap support for F2SV48 as seed ortholog is 100%.

Group of orthologs #1250. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:294 T.rubrum:225

Q5KN98              	100.00%		F2SV56              	100.00%
Bootstrap support for Q5KN98 as seed ortholog is 100%.
Bootstrap support for F2SV56 as seed ortholog is 100%.

Group of orthologs #1251. Best score 294 bits
Score difference with first non-orthologous sequence - C.neoformans:232 T.rubrum:223

Q5KMX1              	100.00%		F2SZ71              	100.00%
Bootstrap support for Q5KMX1 as seed ortholog is 100%.
Bootstrap support for F2SZ71 as seed ortholog is 100%.

Group of orthologs #1252. Best score 293 bits
Score difference with first non-orthologous sequence - C.neoformans:293 T.rubrum:293

Q5KPY7              	100.00%		F2SVW1              	100.00%
Q5KKM8              	18.77%		
Bootstrap support for Q5KPY7 as seed ortholog is 100%.
Bootstrap support for F2SVW1 as seed ortholog is 100%.

Group of orthologs #1253. Best score 293 bits
Score difference with first non-orthologous sequence - C.neoformans:293 T.rubrum:293

Q5K7Y2              	100.00%		F2STG3              	100.00%
Bootstrap support for Q5K7Y2 as seed ortholog is 100%.
Bootstrap support for F2STG3 as seed ortholog is 100%.

Group of orthologs #1254. Best score 293 bits
Score difference with first non-orthologous sequence - C.neoformans:78 T.rubrum:214

Q5KCN5              	100.00%		F2SPQ0              	100.00%
Bootstrap support for Q5KCN5 as seed ortholog is 92%.
Bootstrap support for F2SPQ0 as seed ortholog is 99%.

Group of orthologs #1255. Best score 293 bits
Score difference with first non-orthologous sequence - C.neoformans:293 T.rubrum:293

Q5KJQ1              	100.00%		F2SYT5              	100.00%
Bootstrap support for Q5KJQ1 as seed ortholog is 100%.
Bootstrap support for F2SYT5 as seed ortholog is 100%.

Group of orthologs #1256. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 T.rubrum:292

Q5K8N7              	100.00%		F2SII7              	100.00%
Bootstrap support for Q5K8N7 as seed ortholog is 100%.
Bootstrap support for F2SII7 as seed ortholog is 100%.

Group of orthologs #1257. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:182 T.rubrum:292

P0CP14              	100.00%		F2SL72              	100.00%
Bootstrap support for P0CP14 as seed ortholog is 100%.
Bootstrap support for F2SL72 as seed ortholog is 100%.

Group of orthologs #1258. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 T.rubrum:292

Q5KFP4              	100.00%		F2SH44              	100.00%
Bootstrap support for Q5KFP4 as seed ortholog is 100%.
Bootstrap support for F2SH44 as seed ortholog is 100%.

Group of orthologs #1259. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 T.rubrum:292

Q5KH84              	100.00%		F2SJ43              	100.00%
Bootstrap support for Q5KH84 as seed ortholog is 100%.
Bootstrap support for F2SJ43 as seed ortholog is 100%.

Group of orthologs #1260. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 T.rubrum:292

Q5KIE9              	100.00%		F2SJA1              	100.00%
Bootstrap support for Q5KIE9 as seed ortholog is 100%.
Bootstrap support for F2SJA1 as seed ortholog is 100%.

Group of orthologs #1261. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubrum:198

Q5KIP0              	100.00%		F2SJY7              	100.00%
Bootstrap support for Q5KIP0 as seed ortholog is 99%.
Bootstrap support for F2SJY7 as seed ortholog is 100%.

Group of orthologs #1262. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 T.rubrum:292

Q5KCD9              	100.00%		F2SVJ6              	100.00%
Bootstrap support for Q5KCD9 as seed ortholog is 100%.
Bootstrap support for F2SVJ6 as seed ortholog is 100%.

Group of orthologs #1263. Best score 292 bits
Score difference with first non-orthologous sequence - C.neoformans:292 T.rubrum:292

Q5KIC1              	100.00%		F2SQT1              	100.00%
Bootstrap support for Q5KIC1 as seed ortholog is 100%.
Bootstrap support for F2SQT1 as seed ortholog is 100%.

Group of orthologs #1264. Best score 291 bits
Score difference with first non-orthologous sequence - C.neoformans:247 T.rubrum:220

Q5K7V7              	100.00%		F2SL90              	100.00%
Bootstrap support for Q5K7V7 as seed ortholog is 100%.
Bootstrap support for F2SL90 as seed ortholog is 100%.

Group of orthologs #1265. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:154 T.rubrum:141

Q5K810              	100.00%		F2SHY9              	100.00%
Bootstrap support for Q5K810 as seed ortholog is 100%.
Bootstrap support for F2SHY9 as seed ortholog is 100%.

Group of orthologs #1266. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:290 T.rubrum:290

Q5KDH9              	100.00%		F2SJ56              	100.00%
Bootstrap support for Q5KDH9 as seed ortholog is 100%.
Bootstrap support for F2SJ56 as seed ortholog is 100%.

Group of orthologs #1267. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:290 T.rubrum:290

Q5KCB2              	100.00%		F2SL49              	100.00%
Bootstrap support for Q5KCB2 as seed ortholog is 100%.
Bootstrap support for F2SL49 as seed ortholog is 100%.

Group of orthologs #1268. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:290 T.rubrum:28

Q5KEZ9              	100.00%		F2SKM9              	100.00%
Bootstrap support for Q5KEZ9 as seed ortholog is 100%.
Bootstrap support for F2SKM9 as seed ortholog is 72%.
Alternative seed ortholog is F2SQB1 (28 bits away from this cluster)

Group of orthologs #1269. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:290 T.rubrum:224

Q5K8T0              	100.00%		F2STW5              	100.00%
Bootstrap support for Q5K8T0 as seed ortholog is 100%.
Bootstrap support for F2STW5 as seed ortholog is 100%.

Group of orthologs #1270. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:228 T.rubrum:178

Q5KD66              	100.00%		F2SRX0              	100.00%
Bootstrap support for Q5KD66 as seed ortholog is 100%.
Bootstrap support for F2SRX0 as seed ortholog is 99%.

Group of orthologs #1271. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:290 T.rubrum:290

Q5KMU2              	100.00%		F2SQ44              	100.00%
Bootstrap support for Q5KMU2 as seed ortholog is 100%.
Bootstrap support for F2SQ44 as seed ortholog is 100%.

Group of orthologs #1272. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:193 T.rubrum:152

Q5KJ52              	100.00%		F2SVV9              	100.00%
Bootstrap support for Q5KJ52 as seed ortholog is 99%.
Bootstrap support for F2SVV9 as seed ortholog is 99%.

Group of orthologs #1273. Best score 290 bits
Score difference with first non-orthologous sequence - C.neoformans:290 T.rubrum:290

Q5KLE8              	100.00%		F2SVD9              	100.00%
Bootstrap support for Q5KLE8 as seed ortholog is 100%.
Bootstrap support for F2SVD9 as seed ortholog is 100%.

Group of orthologs #1274. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:289 T.rubrum:289

P0CO52              	100.00%		F2SCI9              	100.00%
Bootstrap support for P0CO52 as seed ortholog is 100%.
Bootstrap support for F2SCI9 as seed ortholog is 100%.

Group of orthologs #1275. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:212 T.rubrum:289

Q5KDC2              	100.00%		F2SDY0              	100.00%
Bootstrap support for Q5KDC2 as seed ortholog is 99%.
Bootstrap support for F2SDY0 as seed ortholog is 100%.

Group of orthologs #1276. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:289 T.rubrum:289

P0CS14              	100.00%		F2SQ78              	100.00%
Bootstrap support for P0CS14 as seed ortholog is 100%.
Bootstrap support for F2SQ78 as seed ortholog is 100%.

Group of orthologs #1277. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:289 T.rubrum:226

Q5K8T6              	100.00%		F2SPK2              	100.00%
Bootstrap support for Q5K8T6 as seed ortholog is 100%.
Bootstrap support for F2SPK2 as seed ortholog is 100%.

Group of orthologs #1278. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:289 T.rubrum:289

Q5KFE2              	100.00%		F2SL63              	100.00%
Bootstrap support for Q5KFE2 as seed ortholog is 100%.
Bootstrap support for F2SL63 as seed ortholog is 100%.

Group of orthologs #1279. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:289 T.rubrum:207

Q5KHY4              	100.00%		F2SJ75              	100.00%
Bootstrap support for Q5KHY4 as seed ortholog is 100%.
Bootstrap support for F2SJ75 as seed ortholog is 100%.

Group of orthologs #1280. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:138 T.rubrum:289

Q5KDE2              	100.00%		F2ST77              	100.00%
Bootstrap support for Q5KDE2 as seed ortholog is 100%.
Bootstrap support for F2ST77 as seed ortholog is 100%.

Group of orthologs #1281. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:129 T.rubrum:170

Q5KGZ4              	100.00%		F2SQ03              	100.00%
Bootstrap support for Q5KGZ4 as seed ortholog is 100%.
Bootstrap support for F2SQ03 as seed ortholog is 100%.

Group of orthologs #1282. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:289 T.rubrum:289

Q5K9B3              	100.00%		F2SX57              	100.00%
Bootstrap support for Q5K9B3 as seed ortholog is 100%.
Bootstrap support for F2SX57 as seed ortholog is 100%.

Group of orthologs #1283. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:289 T.rubrum:289

Q5KEG8              	100.00%		F2SVY7              	100.00%
Bootstrap support for Q5KEG8 as seed ortholog is 100%.
Bootstrap support for F2SVY7 as seed ortholog is 100%.

Group of orthologs #1284. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:289 T.rubrum:289

Q5KIG6              	100.00%		F2SV09              	100.00%
Bootstrap support for Q5KIG6 as seed ortholog is 100%.
Bootstrap support for F2SV09 as seed ortholog is 100%.

Group of orthologs #1285. Best score 289 bits
Score difference with first non-orthologous sequence - C.neoformans:289 T.rubrum:289

Q5KPB3              	100.00%		F2T0Y5              	100.00%
Bootstrap support for Q5KPB3 as seed ortholog is 100%.
Bootstrap support for F2T0Y5 as seed ortholog is 100%.

Group of orthologs #1286. Best score 288 bits
Score difference with first non-orthologous sequence - C.neoformans:288 T.rubrum:288

Q5KBX6              	100.00%		F2SDW3              	100.00%
Bootstrap support for Q5KBX6 as seed ortholog is 100%.
Bootstrap support for F2SDW3 as seed ortholog is 100%.

Group of orthologs #1287. Best score 288 bits
Score difference with first non-orthologous sequence - C.neoformans:288 T.rubrum:288

Q5KJB8              	100.00%		F2SJT5              	100.00%
Bootstrap support for Q5KJB8 as seed ortholog is 100%.
Bootstrap support for F2SJT5 as seed ortholog is 100%.

Group of orthologs #1288. Best score 288 bits
Score difference with first non-orthologous sequence - C.neoformans:288 T.rubrum:288

Q5KLS0              	100.00%		F2SLP7              	100.00%
Bootstrap support for Q5KLS0 as seed ortholog is 100%.
Bootstrap support for F2SLP7 as seed ortholog is 100%.

Group of orthologs #1289. Best score 288 bits
Score difference with first non-orthologous sequence - C.neoformans:288 T.rubrum:288

Q5KFA6              	100.00%		F2SX21              	100.00%
Bootstrap support for Q5KFA6 as seed ortholog is 100%.
Bootstrap support for F2SX21 as seed ortholog is 100%.

Group of orthologs #1290. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 T.rubrum:57

Q5KEA1              	100.00%		F2SGZ1              	100.00%
Bootstrap support for Q5KEA1 as seed ortholog is 100%.
Bootstrap support for F2SGZ1 as seed ortholog is 81%.

Group of orthologs #1291. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:210 T.rubrum:209

Q5KI80              	100.00%		F2SE44              	100.00%
Bootstrap support for Q5KI80 as seed ortholog is 99%.
Bootstrap support for F2SE44 as seed ortholog is 99%.

Group of orthologs #1292. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 T.rubrum:287

Q5KJF6              	100.00%		F2SIF1              	100.00%
Bootstrap support for Q5KJF6 as seed ortholog is 100%.
Bootstrap support for F2SIF1 as seed ortholog is 100%.

Group of orthologs #1293. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 T.rubrum:287

Q5K716              	100.00%		F2SYF0              	100.00%
Bootstrap support for Q5K716 as seed ortholog is 100%.
Bootstrap support for F2SYF0 as seed ortholog is 100%.

Group of orthologs #1294. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 T.rubrum:287

Q5KJ58              	100.00%		F2SPJ5              	100.00%
Bootstrap support for Q5KJ58 as seed ortholog is 100%.
Bootstrap support for F2SPJ5 as seed ortholog is 100%.

Group of orthologs #1295. Best score 287 bits
Score difference with first non-orthologous sequence - C.neoformans:287 T.rubrum:287

Q5KPH3              	100.00%		F2T0D5              	100.00%
Bootstrap support for Q5KPH3 as seed ortholog is 100%.
Bootstrap support for F2T0D5 as seed ortholog is 100%.

Group of orthologs #1296. Best score 286 bits
Score difference with first non-orthologous sequence - C.neoformans:286 T.rubrum:286

Q5KCW2              	100.00%		F2SJS7              	100.00%
Bootstrap support for Q5KCW2 as seed ortholog is 100%.
Bootstrap support for F2SJS7 as seed ortholog is 100%.

Group of orthologs #1297. Best score 286 bits
Score difference with first non-orthologous sequence - C.neoformans:286 T.rubrum:286

Q5KEH0              	100.00%		F2SVY6              	100.00%
Bootstrap support for Q5KEH0 as seed ortholog is 100%.
Bootstrap support for F2SVY6 as seed ortholog is 100%.

Group of orthologs #1298. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:176 T.rubrum:285

Q5KJU9              	100.00%		F2SFJ4              	100.00%
Bootstrap support for Q5KJU9 as seed ortholog is 100%.
Bootstrap support for F2SFJ4 as seed ortholog is 100%.

Group of orthologs #1299. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:285 T.rubrum:285

Q5KEK8              	100.00%		F2SNU8              	100.00%
Bootstrap support for Q5KEK8 as seed ortholog is 100%.
Bootstrap support for F2SNU8 as seed ortholog is 100%.

Group of orthologs #1300. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:285 T.rubrum:141

Q5KGP7              	100.00%		F2SNY9              	100.00%
Bootstrap support for Q5KGP7 as seed ortholog is 100%.
Bootstrap support for F2SNY9 as seed ortholog is 100%.

Group of orthologs #1301. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:162 T.rubrum:117

Q5KM47              	100.00%		F2SM59              	100.00%
Bootstrap support for Q5KM47 as seed ortholog is 99%.
Bootstrap support for F2SM59 as seed ortholog is 99%.

Group of orthologs #1302. Best score 285 bits
Score difference with first non-orthologous sequence - C.neoformans:285 T.rubrum:285

Q5KI37              	100.00%		F2SWW5              	100.00%
Bootstrap support for Q5KI37 as seed ortholog is 100%.
Bootstrap support for F2SWW5 as seed ortholog is 100%.

Group of orthologs #1303. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 T.rubrum:284

Q5KJN6              	100.00%		F2SNA0              	100.00%
                    	       		F2SRB9              	22.54%
Bootstrap support for Q5KJN6 as seed ortholog is 100%.
Bootstrap support for F2SNA0 as seed ortholog is 100%.

Group of orthologs #1304. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubrum:167

P0CQ42              	100.00%		F2SR54              	100.00%
Bootstrap support for P0CQ42 as seed ortholog is 100%.
Bootstrap support for F2SR54 as seed ortholog is 100%.

Group of orthologs #1305. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 T.rubrum:284

Q5KLA9              	100.00%		F2SG30              	100.00%
Bootstrap support for Q5KLA9 as seed ortholog is 100%.
Bootstrap support for F2SG30 as seed ortholog is 100%.

Group of orthologs #1306. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 T.rubrum:284

Q5KAD9              	100.00%		F2SW06              	100.00%
Bootstrap support for Q5KAD9 as seed ortholog is 100%.
Bootstrap support for F2SW06 as seed ortholog is 100%.

Group of orthologs #1307. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 T.rubrum:284

Q5KCD2              	100.00%		F2SXA0              	100.00%
Bootstrap support for Q5KCD2 as seed ortholog is 100%.
Bootstrap support for F2SXA0 as seed ortholog is 100%.

Group of orthologs #1308. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 T.rubrum:284

Q5KMI7              	100.00%		F2SPE5              	100.00%
Bootstrap support for Q5KMI7 as seed ortholog is 100%.
Bootstrap support for F2SPE5 as seed ortholog is 100%.

Group of orthologs #1309. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:284 T.rubrum:284

Q5KQ04              	100.00%		F2SUT5              	100.00%
Bootstrap support for Q5KQ04 as seed ortholog is 100%.
Bootstrap support for F2SUT5 as seed ortholog is 100%.

Group of orthologs #1310. Best score 284 bits
Score difference with first non-orthologous sequence - C.neoformans:135 T.rubrum:153

Q5KK41              	100.00%		F2T156              	100.00%
Bootstrap support for Q5KK41 as seed ortholog is 100%.
Bootstrap support for F2T156 as seed ortholog is 100%.

Group of orthologs #1311. Best score 283 bits
Score difference with first non-orthologous sequence - C.neoformans:283 T.rubrum:283

Q5KB56              	100.00%		F2SKA1              	100.00%
Bootstrap support for Q5KB56 as seed ortholog is 100%.
Bootstrap support for F2SKA1 as seed ortholog is 100%.

Group of orthologs #1312. Best score 283 bits
Score difference with first non-orthologous sequence - C.neoformans:283 T.rubrum:283

Q5KGJ8              	100.00%		F2SK54              	100.00%
Bootstrap support for Q5KGJ8 as seed ortholog is 100%.
Bootstrap support for F2SK54 as seed ortholog is 100%.

Group of orthologs #1313. Best score 283 bits
Score difference with first non-orthologous sequence - C.neoformans:283 T.rubrum:116

Q5KPM4              	100.00%		F2SDP3              	100.00%
Bootstrap support for Q5KPM4 as seed ortholog is 100%.
Bootstrap support for F2SDP3 as seed ortholog is 99%.

Group of orthologs #1314. Best score 283 bits
Score difference with first non-orthologous sequence - C.neoformans:283 T.rubrum:283

Q5KCJ0              	100.00%		F2SR18              	100.00%
Bootstrap support for Q5KCJ0 as seed ortholog is 100%.
Bootstrap support for F2SR18 as seed ortholog is 100%.

Group of orthologs #1315. Best score 283 bits
Score difference with first non-orthologous sequence - C.neoformans:283 T.rubrum:283

Q5KBH5              	100.00%		F2SS05              	100.00%
Bootstrap support for Q5KBH5 as seed ortholog is 100%.
Bootstrap support for F2SS05 as seed ortholog is 100%.

Group of orthologs #1316. Best score 283 bits
Score difference with first non-orthologous sequence - C.neoformans:283 T.rubrum:283

Q5KFX1              	100.00%		F2SR31              	100.00%
Bootstrap support for Q5KFX1 as seed ortholog is 100%.
Bootstrap support for F2SR31 as seed ortholog is 100%.

Group of orthologs #1317. Best score 283 bits
Score difference with first non-orthologous sequence - C.neoformans:283 T.rubrum:283

Q5K8X8              	100.00%		F2SZ39              	100.00%
Bootstrap support for Q5K8X8 as seed ortholog is 100%.
Bootstrap support for F2SZ39 as seed ortholog is 100%.

Group of orthologs #1318. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:31 T.rubrum:69

Q5K6U1              	100.00%		F2SJB7              	100.00%
Bootstrap support for Q5K6U1 as seed ortholog is 75%.
Bootstrap support for F2SJB7 as seed ortholog is 95%.

Group of orthologs #1319. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:282 T.rubrum:57

Q5KGV6              	100.00%		F2SCT6              	100.00%
Bootstrap support for Q5KGV6 as seed ortholog is 100%.
Bootstrap support for F2SCT6 as seed ortholog is 82%.

Group of orthologs #1320. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:282 T.rubrum:198

P0CP12              	100.00%		F2SPL9              	100.00%
Bootstrap support for P0CP12 as seed ortholog is 100%.
Bootstrap support for F2SPL9 as seed ortholog is 99%.

Group of orthologs #1321. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:282 T.rubrum:282

Q5KNS1              	100.00%		F2SDV1              	100.00%
Bootstrap support for Q5KNS1 as seed ortholog is 100%.
Bootstrap support for F2SDV1 as seed ortholog is 100%.

Group of orthologs #1322. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:201 T.rubrum:179

Q5K9R8              	100.00%		F2SX68              	100.00%
Bootstrap support for Q5K9R8 as seed ortholog is 100%.
Bootstrap support for F2SX68 as seed ortholog is 99%.

Group of orthologs #1323. Best score 282 bits
Score difference with first non-orthologous sequence - C.neoformans:282 T.rubrum:282

Q5KH15              	100.00%		F2SY62              	100.00%
Bootstrap support for Q5KH15 as seed ortholog is 100%.
Bootstrap support for F2SY62 as seed ortholog is 100%.

Group of orthologs #1324. Best score 281 bits
Score difference with first non-orthologous sequence - C.neoformans:281 T.rubrum:281

Q5K9A7              	100.00%		F2SLJ4              	100.00%
Bootstrap support for Q5K9A7 as seed ortholog is 100%.
Bootstrap support for F2SLJ4 as seed ortholog is 100%.

Group of orthologs #1325. Best score 281 bits
Score difference with first non-orthologous sequence - C.neoformans:281 T.rubrum:281

P0CR92              	100.00%		F2ST76              	100.00%
Bootstrap support for P0CR92 as seed ortholog is 100%.
Bootstrap support for F2ST76 as seed ortholog is 100%.

Group of orthologs #1326. Best score 281 bits
Score difference with first non-orthologous sequence - C.neoformans:175 T.rubrum:169

Q5KJU4              	100.00%		F2SMX8              	100.00%
Bootstrap support for Q5KJU4 as seed ortholog is 99%.
Bootstrap support for F2SMX8 as seed ortholog is 100%.

Group of orthologs #1327. Best score 281 bits
Score difference with first non-orthologous sequence - C.neoformans:281 T.rubrum:281

Q5KPE8              	100.00%		F2SK66              	100.00%
Bootstrap support for Q5KPE8 as seed ortholog is 100%.
Bootstrap support for F2SK66 as seed ortholog is 100%.

Group of orthologs #1328. Best score 281 bits
Score difference with first non-orthologous sequence - C.neoformans:15 T.rubrum:36

Q5KLM8              	100.00%		F2SN66              	100.00%
Bootstrap support for Q5KLM8 as seed ortholog is 65%.
Alternative seed ortholog is Q5K9D1 (15 bits away from this cluster)
Bootstrap support for F2SN66 as seed ortholog is 82%.

Group of orthologs #1329. Best score 281 bits
Score difference with first non-orthologous sequence - C.neoformans:281 T.rubrum:281

Q5KP57              	100.00%		F2T197              	100.00%
Bootstrap support for Q5KP57 as seed ortholog is 100%.
Bootstrap support for F2T197 as seed ortholog is 100%.

Group of orthologs #1330. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:5 T.rubrum:280

Q5KM49              	100.00%		F2SQ62              	100.00%
                    	       		F2SDJ7              	6.48%
Bootstrap support for Q5KM49 as seed ortholog is 52%.
Alternative seed ortholog is Q5KEQ7 (5 bits away from this cluster)
Bootstrap support for F2SQ62 as seed ortholog is 100%.

Group of orthologs #1331. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:280 T.rubrum:280

Q5KIW5              	100.00%		F2SGB5              	100.00%
Bootstrap support for Q5KIW5 as seed ortholog is 100%.
Bootstrap support for F2SGB5 as seed ortholog is 100%.

Group of orthologs #1332. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:280 T.rubrum:280

Q5KMQ9              	100.00%		F2SDR7              	100.00%
Bootstrap support for Q5KMQ9 as seed ortholog is 100%.
Bootstrap support for F2SDR7 as seed ortholog is 100%.

Group of orthologs #1333. Best score 280 bits
Score difference with first non-orthologous sequence - C.neoformans:280 T.rubrum:280

Q5KB61              	100.00%		F2SX28              	100.00%
Bootstrap support for Q5KB61 as seed ortholog is 100%.
Bootstrap support for F2SX28 as seed ortholog is 100%.

Group of orthologs #1334. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 T.rubrum:279

Q5K9I8              	100.00%		F2SIZ5              	100.00%
Bootstrap support for Q5K9I8 as seed ortholog is 100%.
Bootstrap support for F2SIZ5 as seed ortholog is 100%.

Group of orthologs #1335. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 T.rubrum:279

Q5KA21              	100.00%		F2SIS2              	100.00%
Bootstrap support for Q5KA21 as seed ortholog is 100%.
Bootstrap support for F2SIS2 as seed ortholog is 100%.

Group of orthologs #1336. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:221 T.rubrum:279

Q5KNT7              	100.00%		F2SBZ9              	100.00%
Bootstrap support for Q5KNT7 as seed ortholog is 100%.
Bootstrap support for F2SBZ9 as seed ortholog is 100%.

Group of orthologs #1337. Best score 279 bits
Score difference with first non-orthologous sequence - C.neoformans:279 T.rubrum:279

Q5KEY4              	100.00%		F2SK63              	100.00%
Bootstrap support for Q5KEY4 as seed ortholog is 100%.
Bootstrap support for F2SK63 as seed ortholog is 100%.

Group of orthologs #1338. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:43 T.rubrum:72

Q5KBZ4              	100.00%		F2SCG6              	100.00%
Bootstrap support for Q5KBZ4 as seed ortholog is 83%.
Bootstrap support for F2SCG6 as seed ortholog is 92%.

Group of orthologs #1339. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:278 T.rubrum:278

Q5KEX5              	100.00%		F2T0T0              	100.00%
Bootstrap support for Q5KEX5 as seed ortholog is 100%.
Bootstrap support for F2T0T0 as seed ortholog is 100%.

Group of orthologs #1340. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:278 T.rubrum:278

Q5KH66              	100.00%		F2SZ52              	100.00%
Bootstrap support for Q5KH66 as seed ortholog is 100%.
Bootstrap support for F2SZ52 as seed ortholog is 100%.

Group of orthologs #1341. Best score 278 bits
Score difference with first non-orthologous sequence - C.neoformans:162 T.rubrum:175

Q5KPY2              	100.00%		F2SWP7              	100.00%
Bootstrap support for Q5KPY2 as seed ortholog is 100%.
Bootstrap support for F2SWP7 as seed ortholog is 100%.

Group of orthologs #1342. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 T.rubrum:277

Q5K8A2              	100.00%		F2SGI2              	100.00%
Bootstrap support for Q5K8A2 as seed ortholog is 100%.
Bootstrap support for F2SGI2 as seed ortholog is 100%.

Group of orthologs #1343. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:210 T.rubrum:277

Q5K9C2              	100.00%		F2SN15              	100.00%
Bootstrap support for Q5K9C2 as seed ortholog is 100%.
Bootstrap support for F2SN15 as seed ortholog is 100%.

Group of orthologs #1344. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 T.rubrum:277

Q5KLL4              	100.00%		F2SEI7              	100.00%
Bootstrap support for Q5KLL4 as seed ortholog is 100%.
Bootstrap support for F2SEI7 as seed ortholog is 100%.

Group of orthologs #1345. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 T.rubrum:277

Q5K9R5              	100.00%		F2SRR6              	100.00%
Bootstrap support for Q5K9R5 as seed ortholog is 100%.
Bootstrap support for F2SRR6 as seed ortholog is 100%.

Group of orthologs #1346. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:201 T.rubrum:277

Q5KF49              	100.00%		F2SNI2              	100.00%
Bootstrap support for Q5KF49 as seed ortholog is 100%.
Bootstrap support for F2SNI2 as seed ortholog is 100%.

Group of orthologs #1347. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 T.rubrum:277

Q5KD79              	100.00%		F2T041              	100.00%
Bootstrap support for Q5KD79 as seed ortholog is 100%.
Bootstrap support for F2T041 as seed ortholog is 100%.

Group of orthologs #1348. Best score 277 bits
Score difference with first non-orthologous sequence - C.neoformans:277 T.rubrum:220

Q5KJI9              	100.00%		F2SVE4              	100.00%
Bootstrap support for Q5KJI9 as seed ortholog is 100%.
Bootstrap support for F2SVE4 as seed ortholog is 100%.

Group of orthologs #1349. Best score 276 bits
Score difference with first non-orthologous sequence - C.neoformans:197 T.rubrum:152

Q5KGY3              	100.00%		F2SBN5              	100.00%
Bootstrap support for Q5KGY3 as seed ortholog is 100%.
Bootstrap support for F2SBN5 as seed ortholog is 99%.

Group of orthologs #1350. Best score 276 bits
Score difference with first non-orthologous sequence - C.neoformans:230 T.rubrum:167

Q5KC50              	100.00%		F2SJ23              	100.00%
Bootstrap support for Q5KC50 as seed ortholog is 100%.
Bootstrap support for F2SJ23 as seed ortholog is 100%.

Group of orthologs #1351. Best score 276 bits
Score difference with first non-orthologous sequence - C.neoformans:276 T.rubrum:276

Q5K8Q5              	100.00%		F2SNH7              	100.00%
Bootstrap support for Q5K8Q5 as seed ortholog is 100%.
Bootstrap support for F2SNH7 as seed ortholog is 100%.

Group of orthologs #1352. Best score 276 bits
Score difference with first non-orthologous sequence - C.neoformans:276 T.rubrum:276

Q5KPU2              	100.00%		F2SDQ6              	100.00%
Bootstrap support for Q5KPU2 as seed ortholog is 100%.
Bootstrap support for F2SDQ6 as seed ortholog is 100%.

Group of orthologs #1353. Best score 276 bits
Score difference with first non-orthologous sequence - C.neoformans:276 T.rubrum:276

Q5K9L3              	100.00%		F2ST45              	100.00%
Bootstrap support for Q5K9L3 as seed ortholog is 100%.
Bootstrap support for F2ST45 as seed ortholog is 100%.

Group of orthologs #1354. Best score 276 bits
Score difference with first non-orthologous sequence - C.neoformans:276 T.rubrum:276

Q5KPW1              	100.00%		F2SFP0              	100.00%
Bootstrap support for Q5KPW1 as seed ortholog is 100%.
Bootstrap support for F2SFP0 as seed ortholog is 100%.

Group of orthologs #1355. Best score 276 bits
Score difference with first non-orthologous sequence - C.neoformans:212 T.rubrum:177

Q5KP11              	100.00%		F2SJ98              	100.00%
Bootstrap support for Q5KP11 as seed ortholog is 100%.
Bootstrap support for F2SJ98 as seed ortholog is 99%.

Group of orthologs #1356. Best score 276 bits
Score difference with first non-orthologous sequence - C.neoformans:155 T.rubrum:185

Q5KKF5              	100.00%		F2T078              	100.00%
Bootstrap support for Q5KKF5 as seed ortholog is 99%.
Bootstrap support for F2T078 as seed ortholog is 99%.

Group of orthologs #1357. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:183 T.rubrum:275

Q5KBE3              	100.00%		F2SBT7              	100.00%
Bootstrap support for Q5KBE3 as seed ortholog is 99%.
Bootstrap support for F2SBT7 as seed ortholog is 100%.

Group of orthologs #1358. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 T.rubrum:275

Q5K7R1              	100.00%		F2SJQ9              	100.00%
Bootstrap support for Q5K7R1 as seed ortholog is 100%.
Bootstrap support for F2SJQ9 as seed ortholog is 100%.

Group of orthologs #1359. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:188 T.rubrum:217

Q5KI63              	100.00%		F2SGX6              	100.00%
Bootstrap support for Q5KI63 as seed ortholog is 99%.
Bootstrap support for F2SGX6 as seed ortholog is 100%.

Group of orthologs #1360. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 T.rubrum:275

Q5KEF6              	100.00%		F2SVU8              	100.00%
Bootstrap support for Q5KEF6 as seed ortholog is 100%.
Bootstrap support for F2SVU8 as seed ortholog is 100%.

Group of orthologs #1361. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 T.rubrum:275

Q5KQ87              	100.00%		F2SNR4              	100.00%
Bootstrap support for Q5KQ87 as seed ortholog is 100%.
Bootstrap support for F2SNR4 as seed ortholog is 100%.

Group of orthologs #1362. Best score 275 bits
Score difference with first non-orthologous sequence - C.neoformans:275 T.rubrum:275

Q5KDL7              	100.00%		F2T0D3              	100.00%
Bootstrap support for Q5KDL7 as seed ortholog is 100%.
Bootstrap support for F2T0D3 as seed ortholog is 100%.

Group of orthologs #1363. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 T.rubrum:274

Q5KJA8              	100.00%		F2SMT6              	100.00%
                    	       		F2SPN1              	27.31%
Bootstrap support for Q5KJA8 as seed ortholog is 100%.
Bootstrap support for F2SMT6 as seed ortholog is 100%.

Group of orthologs #1364. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:202 T.rubrum:274

P0CS44              	100.00%		F2SCL8              	100.00%
Bootstrap support for P0CS44 as seed ortholog is 99%.
Bootstrap support for F2SCL8 as seed ortholog is 100%.

Group of orthologs #1365. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:63 T.rubrum:207

Q5K717              	100.00%		F2SIP5              	100.00%
Bootstrap support for Q5K717 as seed ortholog is 96%.
Bootstrap support for F2SIP5 as seed ortholog is 100%.

Group of orthologs #1366. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 T.rubrum:274

Q5KAZ2              	100.00%		F2SLF8              	100.00%
Bootstrap support for Q5KAZ2 as seed ortholog is 100%.
Bootstrap support for F2SLF8 as seed ortholog is 100%.

Group of orthologs #1367. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 T.rubrum:274

Q5KN33              	100.00%		F2SGL8              	100.00%
Bootstrap support for Q5KN33 as seed ortholog is 100%.
Bootstrap support for F2SGL8 as seed ortholog is 100%.

Group of orthologs #1368. Best score 274 bits
Score difference with first non-orthologous sequence - C.neoformans:274 T.rubrum:274

Q5KPU5              	100.00%		F2SJY6              	100.00%
Bootstrap support for Q5KPU5 as seed ortholog is 100%.
Bootstrap support for F2SJY6 as seed ortholog is 100%.

Group of orthologs #1369. Best score 273 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubrum:159

Q5KJK5              	100.00%		F2SV18              	100.00%
                    	       		F2SRS4              	13.63%
Bootstrap support for Q5KJK5 as seed ortholog is 99%.
Bootstrap support for F2SV18 as seed ortholog is 99%.

Group of orthologs #1370. Best score 273 bits
Score difference with first non-orthologous sequence - C.neoformans:273 T.rubrum:273

Q5KD80              	100.00%		F2SHE4              	100.00%
Bootstrap support for Q5KD80 as seed ortholog is 100%.
Bootstrap support for F2SHE4 as seed ortholog is 100%.

Group of orthologs #1371. Best score 273 bits
Score difference with first non-orthologous sequence - C.neoformans:273 T.rubrum:273

Q5K6V6              	100.00%		F2SPN8              	100.00%
Bootstrap support for Q5K6V6 as seed ortholog is 100%.
Bootstrap support for F2SPN8 as seed ortholog is 100%.

Group of orthologs #1372. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 T.rubrum:272

Q5K808              	100.00%		F2SEX9              	100.00%
Q5KLR5              	24.29%		
Bootstrap support for Q5K808 as seed ortholog is 100%.
Bootstrap support for F2SEX9 as seed ortholog is 100%.

Group of orthologs #1373. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:272 T.rubrum:272

P0CN40              	100.00%		F2SHF1              	100.00%
Bootstrap support for P0CN40 as seed ortholog is 100%.
Bootstrap support for F2SHF1 as seed ortholog is 100%.

Group of orthologs #1374. Best score 272 bits
Score difference with first non-orthologous sequence - C.neoformans:205 T.rubrum:224

Q5KES0              	100.00%		F2SF48              	100.00%
Bootstrap support for Q5KES0 as seed ortholog is 100%.
Bootstrap support for F2SF48 as seed ortholog is 100%.

Group of orthologs #1375. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:271 T.rubrum:271

Q5KI89              	100.00%		F2SCZ7              	100.00%
Bootstrap support for Q5KI89 as seed ortholog is 100%.
Bootstrap support for F2SCZ7 as seed ortholog is 100%.

Group of orthologs #1376. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:163 T.rubrum:107

Q5KIM7              	100.00%		F2SDG6              	100.00%
Bootstrap support for Q5KIM7 as seed ortholog is 100%.
Bootstrap support for F2SDG6 as seed ortholog is 99%.

Group of orthologs #1377. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:271 T.rubrum:271

P0CN94              	100.00%		F2SRK6              	100.00%
Bootstrap support for P0CN94 as seed ortholog is 100%.
Bootstrap support for F2SRK6 as seed ortholog is 100%.

Group of orthologs #1378. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:271 T.rubrum:188

Q5KJ04              	100.00%		F2SI29              	100.00%
Bootstrap support for Q5KJ04 as seed ortholog is 100%.
Bootstrap support for F2SI29 as seed ortholog is 99%.

Group of orthologs #1379. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:72 T.rubrum:43

Q5K7J8              	100.00%		F2SWF9              	100.00%
Bootstrap support for Q5K7J8 as seed ortholog is 90%.
Bootstrap support for F2SWF9 as seed ortholog is 82%.

Group of orthologs #1380. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:271 T.rubrum:271

Q5KNW2              	100.00%		F2SGY3              	100.00%
Bootstrap support for Q5KNW2 as seed ortholog is 100%.
Bootstrap support for F2SGY3 as seed ortholog is 100%.

Group of orthologs #1381. Best score 271 bits
Score difference with first non-orthologous sequence - C.neoformans:271 T.rubrum:271

Q5KLB1              	100.00%		F2SZ29              	100.00%
Bootstrap support for Q5KLB1 as seed ortholog is 100%.
Bootstrap support for F2SZ29 as seed ortholog is 100%.

Group of orthologs #1382. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:270 T.rubrum:270

P0CO46              	100.00%		F2SHD5              	100.00%
Bootstrap support for P0CO46 as seed ortholog is 100%.
Bootstrap support for F2SHD5 as seed ortholog is 100%.

Group of orthologs #1383. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:270 T.rubrum:270

Q5KGL6              	100.00%		F2SGM8              	100.00%
Bootstrap support for Q5KGL6 as seed ortholog is 100%.
Bootstrap support for F2SGM8 as seed ortholog is 100%.

Group of orthologs #1384. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:270 T.rubrum:139

P0CO48              	100.00%		F2STK9              	100.00%
Bootstrap support for P0CO48 as seed ortholog is 100%.
Bootstrap support for F2STK9 as seed ortholog is 99%.

Group of orthologs #1385. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:270 T.rubrum:270

Q5KLE7              	100.00%		F2SVQ8              	100.00%
Bootstrap support for Q5KLE7 as seed ortholog is 100%.
Bootstrap support for F2SVQ8 as seed ortholog is 100%.

Group of orthologs #1386. Best score 270 bits
Score difference with first non-orthologous sequence - C.neoformans:270 T.rubrum:270

Q5KL43              	100.00%		F2T195              	100.00%
Bootstrap support for Q5KL43 as seed ortholog is 100%.
Bootstrap support for F2T195 as seed ortholog is 100%.

Group of orthologs #1387. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:65 T.rubrum:83

Q5KM14              	100.00%		F2SR37              	100.00%
Q5KJE4              	7.30%		
Bootstrap support for Q5KM14 as seed ortholog is 93%.
Bootstrap support for F2SR37 as seed ortholog is 94%.

Group of orthologs #1388. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 T.rubrum:269

Q5K9F7              	100.00%		F2SPM0              	100.00%
Bootstrap support for Q5K9F7 as seed ortholog is 100%.
Bootstrap support for F2SPM0 as seed ortholog is 100%.

Group of orthologs #1389. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 T.rubrum:269

Q5KLK2              	100.00%		F2SFB1              	100.00%
Bootstrap support for Q5KLK2 as seed ortholog is 100%.
Bootstrap support for F2SFB1 as seed ortholog is 100%.

Group of orthologs #1390. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 T.rubrum:269

Q5KAD8              	100.00%		F2SQG2              	100.00%
Bootstrap support for Q5KAD8 as seed ortholog is 100%.
Bootstrap support for F2SQG2 as seed ortholog is 100%.

Group of orthologs #1391. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubrum:39

Q5KCR3              	100.00%		F2SNF4              	100.00%
Bootstrap support for Q5KCR3 as seed ortholog is 99%.
Bootstrap support for F2SNF4 as seed ortholog is 84%.

Group of orthologs #1392. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:65 T.rubrum:141

Q5K975              	100.00%		F2STF0              	100.00%
Bootstrap support for Q5K975 as seed ortholog is 94%.
Bootstrap support for F2STF0 as seed ortholog is 99%.

Group of orthologs #1393. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:269 T.rubrum:220

Q5KB25              	100.00%		F2SY59              	100.00%
Bootstrap support for Q5KB25 as seed ortholog is 100%.
Bootstrap support for F2SY59 as seed ortholog is 100%.

Group of orthologs #1394. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:183 T.rubrum:269

Q5KJK3              	100.00%		F2SYU0              	100.00%
Bootstrap support for Q5KJK3 as seed ortholog is 99%.
Bootstrap support for F2SYU0 as seed ortholog is 100%.

Group of orthologs #1395. Best score 269 bits
Score difference with first non-orthologous sequence - C.neoformans:49 T.rubrum:269

Q5KJE7              	100.00%		F2T1B4              	100.00%
Bootstrap support for Q5KJE7 as seed ortholog is 87%.
Bootstrap support for F2T1B4 as seed ortholog is 100%.

Group of orthologs #1396. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:268 T.rubrum:268

Q5KLW1              	100.00%		F2SH97              	100.00%
Bootstrap support for Q5KLW1 as seed ortholog is 100%.
Bootstrap support for F2SH97 as seed ortholog is 100%.

Group of orthologs #1397. Best score 268 bits
Score difference with first non-orthologous sequence - C.neoformans:268 T.rubrum:268

Q5KBM2              	100.00%		F2SVV1              	100.00%
Bootstrap support for Q5KBM2 as seed ortholog is 100%.
Bootstrap support for F2SVV1 as seed ortholog is 100%.

Group of orthologs #1398. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:98 T.rubrum:199

P0CP78              	100.00%		F2SGT7              	100.00%
Bootstrap support for P0CP78 as seed ortholog is 99%.
Bootstrap support for F2SGT7 as seed ortholog is 100%.

Group of orthologs #1399. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:267 T.rubrum:267

Q5KNZ4              	100.00%		F2SC08              	100.00%
Bootstrap support for Q5KNZ4 as seed ortholog is 100%.
Bootstrap support for F2SC08 as seed ortholog is 100%.

Group of orthologs #1400. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:267 T.rubrum:267

Q5KGG8              	100.00%		F2SN01              	100.00%
Bootstrap support for Q5KGG8 as seed ortholog is 100%.
Bootstrap support for F2SN01 as seed ortholog is 100%.

Group of orthologs #1401. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:267 T.rubrum:267

Q5KHS0              	100.00%		F2SM14              	100.00%
Bootstrap support for Q5KHS0 as seed ortholog is 100%.
Bootstrap support for F2SM14 as seed ortholog is 100%.

Group of orthologs #1402. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:267 T.rubrum:267

Q5K8K4              	100.00%		F2SZ70              	100.00%
Bootstrap support for Q5K8K4 as seed ortholog is 100%.
Bootstrap support for F2SZ70 as seed ortholog is 100%.

Group of orthologs #1403. Best score 267 bits
Score difference with first non-orthologous sequence - C.neoformans:267 T.rubrum:267

Q5KIB2              	100.00%		F2STH8              	100.00%
Bootstrap support for Q5KIB2 as seed ortholog is 100%.
Bootstrap support for F2STH8 as seed ortholog is 100%.

Group of orthologs #1404. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 T.rubrum:266

P0CR64              	100.00%		F2SM24              	100.00%
Bootstrap support for P0CR64 as seed ortholog is 100%.
Bootstrap support for F2SM24 as seed ortholog is 100%.

Group of orthologs #1405. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 T.rubrum:266

Q5KMC1              	100.00%		F2SCH2              	100.00%
Bootstrap support for Q5KMC1 as seed ortholog is 100%.
Bootstrap support for F2SCH2 as seed ortholog is 100%.

Group of orthologs #1406. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:16 T.rubrum:112

Q5KE69              	100.00%		F2SM92              	100.00%
Bootstrap support for Q5KE69 as seed ortholog is 64%.
Alternative seed ortholog is Q5KLH9 (16 bits away from this cluster)
Bootstrap support for F2SM92 as seed ortholog is 99%.

Group of orthologs #1407. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 T.rubrum:266

Q5KEU5              	100.00%		F2SN09              	100.00%
Bootstrap support for Q5KEU5 as seed ortholog is 100%.
Bootstrap support for F2SN09 as seed ortholog is 100%.

Group of orthologs #1408. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 T.rubrum:266

Q5K8W7              	100.00%		F2SVU9              	100.00%
Bootstrap support for Q5K8W7 as seed ortholog is 100%.
Bootstrap support for F2SVU9 as seed ortholog is 100%.

Group of orthologs #1409. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 T.rubrum:266

Q5K7S4              	100.00%		F2T0Y7              	100.00%
Bootstrap support for Q5K7S4 as seed ortholog is 100%.
Bootstrap support for F2T0Y7 as seed ortholog is 100%.

Group of orthologs #1410. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:182 T.rubrum:162

Q5KKH7              	100.00%		F2SSC2              	100.00%
Bootstrap support for Q5KKH7 as seed ortholog is 100%.
Bootstrap support for F2SSC2 as seed ortholog is 99%.

Group of orthologs #1411. Best score 266 bits
Score difference with first non-orthologous sequence - C.neoformans:266 T.rubrum:266

Q5KJ01              	100.00%		F2SVW3              	100.00%
Bootstrap support for Q5KJ01 as seed ortholog is 100%.
Bootstrap support for F2SVW3 as seed ortholog is 100%.

Group of orthologs #1412. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 T.rubrum:265

Q5K7M8              	100.00%		F2SJL6              	100.00%
Bootstrap support for Q5K7M8 as seed ortholog is 100%.
Bootstrap support for F2SJL6 as seed ortholog is 100%.

Group of orthologs #1413. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 T.rubrum:265

Q5KEZ0              	100.00%		F2SJ47              	100.00%
Bootstrap support for Q5KEZ0 as seed ortholog is 100%.
Bootstrap support for F2SJ47 as seed ortholog is 100%.

Group of orthologs #1414. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 T.rubrum:172

Q5KCD5              	100.00%		F2SM00              	100.00%
Bootstrap support for Q5KCD5 as seed ortholog is 100%.
Bootstrap support for F2SM00 as seed ortholog is 99%.

Group of orthologs #1415. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 T.rubrum:265

Q5KMV4              	100.00%		F2SD71              	100.00%
Bootstrap support for Q5KMV4 as seed ortholog is 100%.
Bootstrap support for F2SD71 as seed ortholog is 100%.

Group of orthologs #1416. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 T.rubrum:265

Q5K6X5              	100.00%		F2STZ1              	100.00%
Bootstrap support for Q5K6X5 as seed ortholog is 100%.
Bootstrap support for F2STZ1 as seed ortholog is 100%.

Group of orthologs #1417. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 T.rubrum:265

Q5KPJ7              	100.00%		F2SI25              	100.00%
Bootstrap support for Q5KPJ7 as seed ortholog is 100%.
Bootstrap support for F2SI25 as seed ortholog is 100%.

Group of orthologs #1418. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 T.rubrum:265

Q5KI12              	100.00%		F2SQ01              	100.00%
Bootstrap support for Q5KI12 as seed ortholog is 100%.
Bootstrap support for F2SQ01 as seed ortholog is 100%.

Group of orthologs #1419. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 T.rubrum:265

Q5KNZ5              	100.00%		F2SSM7              	100.00%
Bootstrap support for Q5KNZ5 as seed ortholog is 100%.
Bootstrap support for F2SSM7 as seed ortholog is 100%.

Group of orthologs #1420. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 T.rubrum:265

Q5KGU0              	100.00%		F2T0T7              	100.00%
Bootstrap support for Q5KGU0 as seed ortholog is 100%.
Bootstrap support for F2T0T7 as seed ortholog is 100%.

Group of orthologs #1421. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 T.rubrum:265

Q5KP63              	100.00%		F2SVK6              	100.00%
Bootstrap support for Q5KP63 as seed ortholog is 100%.
Bootstrap support for F2SVK6 as seed ortholog is 100%.

Group of orthologs #1422. Best score 265 bits
Score difference with first non-orthologous sequence - C.neoformans:265 T.rubrum:265

Q5KPH8              	100.00%		F2T0S9              	100.00%
Bootstrap support for Q5KPH8 as seed ortholog is 100%.
Bootstrap support for F2T0S9 as seed ortholog is 100%.

Group of orthologs #1423. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 T.rubrum:264

Q5KPX1              	100.00%		F2SDQ9              	100.00%
Bootstrap support for Q5KPX1 as seed ortholog is 100%.
Bootstrap support for F2SDQ9 as seed ortholog is 100%.

Group of orthologs #1424. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 T.rubrum:264

Q5KB63              	100.00%		F2STH7              	100.00%
Bootstrap support for Q5KB63 as seed ortholog is 100%.
Bootstrap support for F2STH7 as seed ortholog is 100%.

Group of orthologs #1425. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 T.rubrum:264

Q5KJP2              	100.00%		F2SNT4              	100.00%
Bootstrap support for Q5KJP2 as seed ortholog is 100%.
Bootstrap support for F2SNT4 as seed ortholog is 100%.

Group of orthologs #1426. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 T.rubrum:264

Q5KHW9              	100.00%		F2SVA6              	100.00%
Bootstrap support for Q5KHW9 as seed ortholog is 100%.
Bootstrap support for F2SVA6 as seed ortholog is 100%.

Group of orthologs #1427. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 T.rubrum:264

Q5KKJ4              	100.00%		F2SXU0              	100.00%
Bootstrap support for Q5KKJ4 as seed ortholog is 100%.
Bootstrap support for F2SXU0 as seed ortholog is 100%.

Group of orthologs #1428. Best score 264 bits
Score difference with first non-orthologous sequence - C.neoformans:264 T.rubrum:264

Q5KQ20              	100.00%		F2T139              	100.00%
Bootstrap support for Q5KQ20 as seed ortholog is 100%.
Bootstrap support for F2T139 as seed ortholog is 100%.

Group of orthologs #1429. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:263 T.rubrum:263

Q5KF59              	100.00%		F2SPA8              	100.00%
Q5KIR6              	21.91%		
Q5KFK9              	7.60%		
Bootstrap support for Q5KF59 as seed ortholog is 100%.
Bootstrap support for F2SPA8 as seed ortholog is 100%.

Group of orthologs #1430. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:263 T.rubrum:263

P0CR14              	100.00%		F2SPT6              	100.00%
Bootstrap support for P0CR14 as seed ortholog is 100%.
Bootstrap support for F2SPT6 as seed ortholog is 100%.

Group of orthologs #1431. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:51 T.rubrum:0

Q5KGZ0              	100.00%		F2SSX9              	100.00%
Bootstrap support for Q5KGZ0 as seed ortholog is 88%.
Bootstrap support for F2SSX9 as seed ortholog is 51%.
Alternative seed ortholog is F2SE84 (0 bits away from this cluster)

Group of orthologs #1432. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:263 T.rubrum:263

Q5KMP7              	100.00%		F2SNZ5              	100.00%
Bootstrap support for Q5KMP7 as seed ortholog is 100%.
Bootstrap support for F2SNZ5 as seed ortholog is 100%.

Group of orthologs #1433. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:196 T.rubrum:263

Q5KG37              	100.00%		F2SY21              	100.00%
Bootstrap support for Q5KG37 as seed ortholog is 100%.
Bootstrap support for F2SY21 as seed ortholog is 100%.

Group of orthologs #1434. Best score 263 bits
Score difference with first non-orthologous sequence - C.neoformans:263 T.rubrum:263

Q5KM40              	100.00%		F2SZ84              	100.00%
Bootstrap support for Q5KM40 as seed ortholog is 100%.
Bootstrap support for F2SZ84 as seed ortholog is 100%.

Group of orthologs #1435. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 T.rubrum:262

P0CM98              	100.00%		F2SHB9              	100.00%
Bootstrap support for P0CM98 as seed ortholog is 100%.
Bootstrap support for F2SHB9 as seed ortholog is 100%.

Group of orthologs #1436. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 T.rubrum:262

P0CS80              	100.00%		F2SLK1              	100.00%
Bootstrap support for P0CS80 as seed ortholog is 100%.
Bootstrap support for F2SLK1 as seed ortholog is 100%.

Group of orthologs #1437. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 T.rubrum:262

Q5KLV9              	100.00%		F2SUQ3              	100.00%
Bootstrap support for Q5KLV9 as seed ortholog is 100%.
Bootstrap support for F2SUQ3 as seed ortholog is 100%.

Group of orthologs #1438. Best score 262 bits
Score difference with first non-orthologous sequence - C.neoformans:262 T.rubrum:206

Q5KM26              	100.00%		F2T089              	100.00%
Bootstrap support for Q5KM26 as seed ortholog is 100%.
Bootstrap support for F2T089 as seed ortholog is 100%.

Group of orthologs #1439. Best score 261 bits
Score difference with first non-orthologous sequence - C.neoformans:261 T.rubrum:261

Q5K8G6              	100.00%		F2SDS9              	100.00%
Bootstrap support for Q5K8G6 as seed ortholog is 100%.
Bootstrap support for F2SDS9 as seed ortholog is 100%.

Group of orthologs #1440. Best score 261 bits
Score difference with first non-orthologous sequence - C.neoformans:261 T.rubrum:261

Q5KB57              	100.00%		F2SHX4              	100.00%
Bootstrap support for Q5KB57 as seed ortholog is 100%.
Bootstrap support for F2SHX4 as seed ortholog is 100%.

Group of orthologs #1441. Best score 261 bits
Score difference with first non-orthologous sequence - C.neoformans:261 T.rubrum:261

Q5KDG1              	100.00%		F2STP0              	100.00%
Bootstrap support for Q5KDG1 as seed ortholog is 100%.
Bootstrap support for F2STP0 as seed ortholog is 100%.

Group of orthologs #1442. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:260 T.rubrum:260

Q5KDU8              	100.00%		F2SD59              	100.00%
Bootstrap support for Q5KDU8 as seed ortholog is 100%.
Bootstrap support for F2SD59 as seed ortholog is 100%.

Group of orthologs #1443. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:260 T.rubrum:182

Q5KMS8              	100.00%		F2SEX2              	100.00%
Bootstrap support for Q5KMS8 as seed ortholog is 100%.
Bootstrap support for F2SEX2 as seed ortholog is 100%.

Group of orthologs #1444. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:260 T.rubrum:260

Q5KPK4              	100.00%		F2SHD9              	100.00%
Bootstrap support for Q5KPK4 as seed ortholog is 100%.
Bootstrap support for F2SHD9 as seed ortholog is 100%.

Group of orthologs #1445. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:260 T.rubrum:260

Q5KIF9              	100.00%		F2SU51              	100.00%
Bootstrap support for Q5KIF9 as seed ortholog is 100%.
Bootstrap support for F2SU51 as seed ortholog is 100%.

Group of orthologs #1446. Best score 260 bits
Score difference with first non-orthologous sequence - C.neoformans:200 T.rubrum:151

Q5KMM3              	100.00%		F2SR78              	100.00%
Bootstrap support for Q5KMM3 as seed ortholog is 100%.
Bootstrap support for F2SR78 as seed ortholog is 99%.

Group of orthologs #1447. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 T.rubrum:259

Q5KA19              	100.00%		F2SGS5              	100.00%
Bootstrap support for Q5KA19 as seed ortholog is 100%.
Bootstrap support for F2SGS5 as seed ortholog is 100%.

Group of orthologs #1448. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 T.rubrum:259

P0CO90              	100.00%		F2SNQ9              	100.00%
Bootstrap support for P0CO90 as seed ortholog is 100%.
Bootstrap support for F2SNQ9 as seed ortholog is 100%.

Group of orthologs #1449. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 T.rubrum:259

Q5KHV7              	100.00%		F2SEF1              	100.00%
Bootstrap support for Q5KHV7 as seed ortholog is 100%.
Bootstrap support for F2SEF1 as seed ortholog is 100%.

Group of orthologs #1450. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubrum:118

Q5KF72              	100.00%		F2SHJ4              	100.00%
Bootstrap support for Q5KF72 as seed ortholog is 100%.
Bootstrap support for F2SHJ4 as seed ortholog is 100%.

Group of orthologs #1451. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 T.rubrum:259

Q5KEH5              	100.00%		F2SIE9              	100.00%
Bootstrap support for Q5KEH5 as seed ortholog is 100%.
Bootstrap support for F2SIE9 as seed ortholog is 100%.

Group of orthologs #1452. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 T.rubrum:259

Q5KKT8              	100.00%		F2SFW7              	100.00%
Bootstrap support for Q5KKT8 as seed ortholog is 100%.
Bootstrap support for F2SFW7 as seed ortholog is 100%.

Group of orthologs #1453. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:219 T.rubrum:195

Q5KLC9              	100.00%		F2SHP6              	100.00%
Bootstrap support for Q5KLC9 as seed ortholog is 99%.
Bootstrap support for F2SHP6 as seed ortholog is 99%.

Group of orthologs #1454. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 T.rubrum:259

Q5KAI5              	100.00%		F2STJ0              	100.00%
Bootstrap support for Q5KAI5 as seed ortholog is 100%.
Bootstrap support for F2STJ0 as seed ortholog is 100%.

Group of orthologs #1455. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 T.rubrum:259

Q5KFM4              	100.00%		F2SUY5              	100.00%
Bootstrap support for Q5KFM4 as seed ortholog is 100%.
Bootstrap support for F2SUY5 as seed ortholog is 100%.

Group of orthologs #1456. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:259 T.rubrum:259

Q5KF11              	100.00%		F2SZD2              	100.00%
Bootstrap support for Q5KF11 as seed ortholog is 100%.
Bootstrap support for F2SZD2 as seed ortholog is 100%.

Group of orthologs #1457. Best score 259 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubrum:259

Q5KGC9              	100.00%		F2SZV7              	100.00%
Bootstrap support for Q5KGC9 as seed ortholog is 99%.
Bootstrap support for F2SZV7 as seed ortholog is 100%.

Group of orthologs #1458. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:83 T.rubrum:72

Q5K913              	100.00%		F2SMF3              	100.00%
Bootstrap support for Q5K913 as seed ortholog is 97%.
Bootstrap support for F2SMF3 as seed ortholog is 90%.

Group of orthologs #1459. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:258 T.rubrum:258

Q5KLG9              	100.00%		F2SCS4              	100.00%
Bootstrap support for Q5KLG9 as seed ortholog is 100%.
Bootstrap support for F2SCS4 as seed ortholog is 100%.

Group of orthologs #1460. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:258 T.rubrum:155

Q5KH99              	100.00%		F2SLH8              	100.00%
Bootstrap support for Q5KH99 as seed ortholog is 100%.
Bootstrap support for F2SLH8 as seed ortholog is 99%.

Group of orthologs #1461. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:258 T.rubrum:258

Q5KMM9              	100.00%		F2SK93              	100.00%
Bootstrap support for Q5KMM9 as seed ortholog is 100%.
Bootstrap support for F2SK93 as seed ortholog is 100%.

Group of orthologs #1462. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:258 T.rubrum:258

Q5KKF8              	100.00%		F2SXT7              	100.00%
Bootstrap support for Q5KKF8 as seed ortholog is 100%.
Bootstrap support for F2SXT7 as seed ortholog is 100%.

Group of orthologs #1463. Best score 258 bits
Score difference with first non-orthologous sequence - C.neoformans:258 T.rubrum:258

Q5KNY9              	100.00%		F2T120              	100.00%
Bootstrap support for Q5KNY9 as seed ortholog is 100%.
Bootstrap support for F2T120 as seed ortholog is 100%.

Group of orthologs #1464. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 T.rubrum:106

Q5K6Y9              	100.00%		F2SIY0              	100.00%
Bootstrap support for Q5K6Y9 as seed ortholog is 100%.
Bootstrap support for F2SIY0 as seed ortholog is 98%.

Group of orthologs #1465. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 T.rubrum:257

Q5K7I9              	100.00%		F2SUX8              	100.00%
Bootstrap support for Q5K7I9 as seed ortholog is 100%.
Bootstrap support for F2SUX8 as seed ortholog is 100%.

Group of orthologs #1466. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubrum:190

Q5KAN3              	100.00%		F2SWQ0              	100.00%
Bootstrap support for Q5KAN3 as seed ortholog is 93%.
Bootstrap support for F2SWQ0 as seed ortholog is 100%.

Group of orthologs #1467. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:81 T.rubrum:257

Q5KGL9              	100.00%		F2SUU6              	100.00%
Bootstrap support for Q5KGL9 as seed ortholog is 94%.
Bootstrap support for F2SUU6 as seed ortholog is 100%.

Group of orthologs #1468. Best score 257 bits
Score difference with first non-orthologous sequence - C.neoformans:257 T.rubrum:257

Q5KP79              	100.00%		F2SWJ2              	100.00%
Bootstrap support for Q5KP79 as seed ortholog is 100%.
Bootstrap support for F2SWJ2 as seed ortholog is 100%.

Group of orthologs #1469. Best score 256 bits
Score difference with first non-orthologous sequence - C.neoformans:256 T.rubrum:173

Q5K938              	100.00%		F2SC22              	100.00%
Bootstrap support for Q5K938 as seed ortholog is 100%.
Bootstrap support for F2SC22 as seed ortholog is 100%.

Group of orthologs #1470. Best score 256 bits
Score difference with first non-orthologous sequence - C.neoformans:256 T.rubrum:256

Q5KM42              	100.00%		F2SG98              	100.00%
Bootstrap support for Q5KM42 as seed ortholog is 100%.
Bootstrap support for F2SG98 as seed ortholog is 100%.

Group of orthologs #1471. Best score 256 bits
Score difference with first non-orthologous sequence - C.neoformans:256 T.rubrum:212

Q5KM53              	100.00%		F2SJ12              	100.00%
Bootstrap support for Q5KM53 as seed ortholog is 100%.
Bootstrap support for F2SJ12 as seed ortholog is 99%.

Group of orthologs #1472. Best score 256 bits
Score difference with first non-orthologous sequence - C.neoformans:171 T.rubrum:128

Q5KJH5              	100.00%		F2SNY2              	100.00%
Bootstrap support for Q5KJH5 as seed ortholog is 100%.
Bootstrap support for F2SNY2 as seed ortholog is 99%.

Group of orthologs #1473. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:163 T.rubrum:147

Q5KJN2              	100.00%		F2SQ98              	100.00%
Q5KMX0              	27.17%		
Bootstrap support for Q5KJN2 as seed ortholog is 99%.
Bootstrap support for F2SQ98 as seed ortholog is 99%.

Group of orthologs #1474. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 T.rubrum:255

Q5KBP2              	100.00%		F2SFZ4              	100.00%
Bootstrap support for Q5KBP2 as seed ortholog is 100%.
Bootstrap support for F2SFZ4 as seed ortholog is 100%.

Group of orthologs #1475. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 T.rubrum:255

Q5KLL3              	100.00%		F2SMP9              	100.00%
Bootstrap support for Q5KLL3 as seed ortholog is 100%.
Bootstrap support for F2SMP9 as seed ortholog is 100%.

Group of orthologs #1476. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 T.rubrum:255

Q5KLE6              	100.00%		F2SS06              	100.00%
Bootstrap support for Q5KLE6 as seed ortholog is 100%.
Bootstrap support for F2SS06 as seed ortholog is 100%.

Group of orthologs #1477. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 T.rubrum:255

Q5KMC2              	100.00%		F2SVB5              	100.00%
Bootstrap support for Q5KMC2 as seed ortholog is 100%.
Bootstrap support for F2SVB5 as seed ortholog is 100%.

Group of orthologs #1478. Best score 255 bits
Score difference with first non-orthologous sequence - C.neoformans:255 T.rubrum:201

Q5KNX4              	100.00%		F2SXV8              	100.00%
Bootstrap support for Q5KNX4 as seed ortholog is 100%.
Bootstrap support for F2SXV8 as seed ortholog is 99%.

Group of orthologs #1479. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:254 T.rubrum:254

Q5KFA5              	100.00%		F2SGN1              	100.00%
Q5KG32              	28.12%		
Q5KP73              	25.12%		
Bootstrap support for Q5KFA5 as seed ortholog is 100%.
Bootstrap support for F2SGN1 as seed ortholog is 100%.

Group of orthologs #1480. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:254 T.rubrum:130

Q5KK09              	100.00%		F2SG70              	100.00%
Bootstrap support for Q5KK09 as seed ortholog is 100%.
Bootstrap support for F2SG70 as seed ortholog is 99%.

Group of orthologs #1481. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:162 T.rubrum:137

Q5KNW1              	100.00%		F2SIQ8              	100.00%
Bootstrap support for Q5KNW1 as seed ortholog is 99%.
Bootstrap support for F2SIQ8 as seed ortholog is 99%.

Group of orthologs #1482. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:254 T.rubrum:254

Q5K7J7              	100.00%		F2T0G6              	100.00%
Bootstrap support for Q5K7J7 as seed ortholog is 100%.
Bootstrap support for F2T0G6 as seed ortholog is 100%.

Group of orthologs #1483. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:254 T.rubrum:254

Q5KHA1              	100.00%		F2SUN5              	100.00%
Bootstrap support for Q5KHA1 as seed ortholog is 100%.
Bootstrap support for F2SUN5 as seed ortholog is 100%.

Group of orthologs #1484. Best score 254 bits
Score difference with first non-orthologous sequence - C.neoformans:254 T.rubrum:254

Q5KL97              	100.00%		F2SYW9              	100.00%
Bootstrap support for Q5KL97 as seed ortholog is 100%.
Bootstrap support for F2SYW9 as seed ortholog is 100%.

Group of orthologs #1485. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubrum:136

Q5KMD9              	100.00%		F2SRU7              	100.00%
Q5KMU7              	5.93%		F2SI76              	18.40%
                    	       		F2SWR6              	16.86%
Bootstrap support for Q5KMD9 as seed ortholog is 99%.
Bootstrap support for F2SRU7 as seed ortholog is 99%.

Group of orthologs #1486. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 T.rubrum:135

P0CP32              	100.00%		F2SFS4              	100.00%
Bootstrap support for P0CP32 as seed ortholog is 100%.
Bootstrap support for F2SFS4 as seed ortholog is 99%.

Group of orthologs #1487. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 T.rubrum:253

Q5KCY7              	100.00%		F2SIQ6              	100.00%
Bootstrap support for Q5KCY7 as seed ortholog is 100%.
Bootstrap support for F2SIQ6 as seed ortholog is 100%.

Group of orthologs #1488. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 T.rubrum:253

Q5KDD6              	100.00%		F2SL98              	100.00%
Bootstrap support for Q5KDD6 as seed ortholog is 100%.
Bootstrap support for F2SL98 as seed ortholog is 100%.

Group of orthologs #1489. Best score 253 bits
Score difference with first non-orthologous sequence - C.neoformans:253 T.rubrum:52

Q5K9G2              	100.00%		F2SQS0              	100.00%
Bootstrap support for Q5K9G2 as seed ortholog is 100%.
Bootstrap support for F2SQS0 as seed ortholog is 92%.

Group of orthologs #1490. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:178 T.rubrum:43

Q5KKT4              	100.00%		F2SN05              	100.00%
Q5KB07              	12.15%		
Q5K8B1              	10.18%		
Q5KB13              	5.40%		
Bootstrap support for Q5KKT4 as seed ortholog is 99%.
Bootstrap support for F2SN05 as seed ortholog is 85%.

Group of orthologs #1491. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:252 T.rubrum:252

Q5K7T3              	100.00%		F2SFK7              	100.00%
Bootstrap support for Q5K7T3 as seed ortholog is 100%.
Bootstrap support for F2SFK7 as seed ortholog is 100%.

Group of orthologs #1492. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:252 T.rubrum:252

Q5KJW9              	100.00%		F2SCM6              	100.00%
Bootstrap support for Q5KJW9 as seed ortholog is 100%.
Bootstrap support for F2SCM6 as seed ortholog is 100%.

Group of orthologs #1493. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:252 T.rubrum:252

Q5KM16              	100.00%		F2SBW6              	100.00%
Bootstrap support for Q5KM16 as seed ortholog is 100%.
Bootstrap support for F2SBW6 as seed ortholog is 100%.

Group of orthologs #1494. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:252 T.rubrum:252

P0CM04              	100.00%		F2ST79              	100.00%
Bootstrap support for P0CM04 as seed ortholog is 100%.
Bootstrap support for F2ST79 as seed ortholog is 100%.

Group of orthologs #1495. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:252 T.rubrum:252

Q5K720              	100.00%		F2SY02              	100.00%
Bootstrap support for Q5K720 as seed ortholog is 100%.
Bootstrap support for F2SY02 as seed ortholog is 100%.

Group of orthologs #1496. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:252 T.rubrum:252

Q5KIC5              	100.00%		F2SNY5              	100.00%
Bootstrap support for Q5KIC5 as seed ortholog is 100%.
Bootstrap support for F2SNY5 as seed ortholog is 100%.

Group of orthologs #1497. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:252 T.rubrum:252

Q5KA36              	100.00%		F2SWI7              	100.00%
Bootstrap support for Q5KA36 as seed ortholog is 100%.
Bootstrap support for F2SWI7 as seed ortholog is 100%.

Group of orthologs #1498. Best score 252 bits
Score difference with first non-orthologous sequence - C.neoformans:252 T.rubrum:252

Q5KDF6              	100.00%		F2SX45              	100.00%
Bootstrap support for Q5KDF6 as seed ortholog is 100%.
Bootstrap support for F2SX45 as seed ortholog is 100%.

Group of orthologs #1499. Best score 251 bits
Score difference with first non-orthologous sequence - C.neoformans:251 T.rubrum:251

Q5KJ50              	100.00%		F2SCM1              	100.00%
Bootstrap support for Q5KJ50 as seed ortholog is 100%.
Bootstrap support for F2SCM1 as seed ortholog is 100%.

Group of orthologs #1500. Best score 251 bits
Score difference with first non-orthologous sequence - C.neoformans:251 T.rubrum:251

P0CM54              	100.00%		F2SVK1              	100.00%
Bootstrap support for P0CM54 as seed ortholog is 100%.
Bootstrap support for F2SVK1 as seed ortholog is 100%.

Group of orthologs #1501. Best score 251 bits
Score difference with first non-orthologous sequence - C.neoformans:251 T.rubrum:251

Q5KGU5              	100.00%		F2SR13              	100.00%
Bootstrap support for Q5KGU5 as seed ortholog is 100%.
Bootstrap support for F2SR13 as seed ortholog is 100%.

Group of orthologs #1502. Best score 251 bits
Score difference with first non-orthologous sequence - C.neoformans:251 T.rubrum:251

Q5K9U5              	100.00%		F2SXP1              	100.00%
Bootstrap support for Q5K9U5 as seed ortholog is 100%.
Bootstrap support for F2SXP1 as seed ortholog is 100%.

Group of orthologs #1503. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 T.rubrum:250

Q5KBT6              	100.00%		F2SWF7              	100.00%
Bootstrap support for Q5KBT6 as seed ortholog is 100%.
Bootstrap support for F2SWF7 as seed ortholog is 100%.

Group of orthologs #1504. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 T.rubrum:250

Q5KAJ5              	100.00%		F2SYE9              	100.00%
Bootstrap support for Q5KAJ5 as seed ortholog is 100%.
Bootstrap support for F2SYE9 as seed ortholog is 100%.

Group of orthologs #1505. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 T.rubrum:250

Q5KPD2              	100.00%		F2SLT6              	100.00%
Bootstrap support for Q5KPD2 as seed ortholog is 100%.
Bootstrap support for F2SLT6 as seed ortholog is 100%.

Group of orthologs #1506. Best score 250 bits
Score difference with first non-orthologous sequence - C.neoformans:250 T.rubrum:250

Q5KFX7              	100.00%		F2SVI5              	100.00%
Bootstrap support for Q5KFX7 as seed ortholog is 100%.
Bootstrap support for F2SVI5 as seed ortholog is 100%.

Group of orthologs #1507. Best score 249 bits
Score difference with first non-orthologous sequence - C.neoformans:249 T.rubrum:249

Q5K9E8              	100.00%		F2SXB6              	100.00%
Q5KG01              	37.53%		
Bootstrap support for Q5K9E8 as seed ortholog is 100%.
Bootstrap support for F2SXB6 as seed ortholog is 100%.

Group of orthologs #1508. Best score 249 bits
Score difference with first non-orthologous sequence - C.neoformans:249 T.rubrum:249

P0CL98              	100.00%		F2SBX0              	100.00%
Bootstrap support for P0CL98 as seed ortholog is 100%.
Bootstrap support for F2SBX0 as seed ortholog is 100%.

Group of orthologs #1509. Best score 249 bits
Score difference with first non-orthologous sequence - C.neoformans:249 T.rubrum:249

Q5KE11              	100.00%		F2SCQ2              	100.00%
Bootstrap support for Q5KE11 as seed ortholog is 100%.
Bootstrap support for F2SCQ2 as seed ortholog is 100%.

Group of orthologs #1510. Best score 249 bits
Score difference with first non-orthologous sequence - C.neoformans:166 T.rubrum:147

Q5KB58              	100.00%		F2SI08              	100.00%
Bootstrap support for Q5KB58 as seed ortholog is 100%.
Bootstrap support for F2SI08 as seed ortholog is 99%.

Group of orthologs #1511. Best score 249 bits
Score difference with first non-orthologous sequence - C.neoformans:249 T.rubrum:249

P0CM14              	100.00%		F2SY70              	100.00%
Bootstrap support for P0CM14 as seed ortholog is 100%.
Bootstrap support for F2SY70 as seed ortholog is 100%.

Group of orthologs #1512. Best score 249 bits
Score difference with first non-orthologous sequence - C.neoformans:249 T.rubrum:249

Q5KL68              	100.00%		F2SJD9              	100.00%
Bootstrap support for Q5KL68 as seed ortholog is 100%.
Bootstrap support for F2SJD9 as seed ortholog is 100%.

Group of orthologs #1513. Best score 249 bits
Score difference with first non-orthologous sequence - C.neoformans:249 T.rubrum:148

Q5K8L0              	100.00%		F2SZR6              	100.00%
Bootstrap support for Q5K8L0 as seed ortholog is 100%.
Bootstrap support for F2SZR6 as seed ortholog is 99%.

Group of orthologs #1514. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 T.rubrum:248

Q5KFH2              	100.00%		F2SM60              	100.00%
Q5K8Q7              	25.51%		
Bootstrap support for Q5KFH2 as seed ortholog is 100%.
Bootstrap support for F2SM60 as seed ortholog is 100%.

Group of orthologs #1515. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:107 T.rubrum:150

Q5KHG6              	100.00%		F2SSR5              	100.00%
                    	       		F2SYR8              	11.53%
Bootstrap support for Q5KHG6 as seed ortholog is 99%.
Bootstrap support for F2SSR5 as seed ortholog is 100%.

Group of orthologs #1516. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 T.rubrum:248

Q5KEP7              	100.00%		F2T166              	100.00%
                    	       		F2SMJ3              	13.38%
Bootstrap support for Q5KEP7 as seed ortholog is 100%.
Bootstrap support for F2T166 as seed ortholog is 100%.

Group of orthologs #1517. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 T.rubrum:248

P0CQ10              	100.00%		F2SIE4              	100.00%
Bootstrap support for P0CQ10 as seed ortholog is 100%.
Bootstrap support for F2SIE4 as seed ortholog is 100%.

Group of orthologs #1518. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 T.rubrum:248

Q5KBK2              	100.00%		F2SDR1              	100.00%
Bootstrap support for Q5KBK2 as seed ortholog is 100%.
Bootstrap support for F2SDR1 as seed ortholog is 100%.

Group of orthologs #1519. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 T.rubrum:248

Q5KFT0              	100.00%		F2SCI0              	100.00%
Bootstrap support for Q5KFT0 as seed ortholog is 100%.
Bootstrap support for F2SCI0 as seed ortholog is 100%.

Group of orthologs #1520. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 T.rubrum:248

Q5KNW3              	100.00%		F2SF22              	100.00%
Bootstrap support for Q5KNW3 as seed ortholog is 100%.
Bootstrap support for F2SF22 as seed ortholog is 100%.

Group of orthologs #1521. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 T.rubrum:248

Q5KDJ7              	100.00%		F2SQA8              	100.00%
Bootstrap support for Q5KDJ7 as seed ortholog is 100%.
Bootstrap support for F2SQA8 as seed ortholog is 100%.

Group of orthologs #1522. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:248 T.rubrum:248

Q5KLA2              	100.00%		F2SKC3              	100.00%
Bootstrap support for Q5KLA2 as seed ortholog is 100%.
Bootstrap support for F2SKC3 as seed ortholog is 100%.

Group of orthologs #1523. Best score 248 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubrum:93

Q5KG21              	100.00%		F2SXX8              	100.00%
Bootstrap support for Q5KG21 as seed ortholog is 95%.
Bootstrap support for F2SXX8 as seed ortholog is 96%.

Group of orthologs #1524. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 T.rubrum:62

Q5KA58              	100.00%		F2SG44              	100.00%
Bootstrap support for Q5KA58 as seed ortholog is 100%.
Bootstrap support for F2SG44 as seed ortholog is 88%.

Group of orthologs #1525. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 T.rubrum:247

Q5KLE3              	100.00%		F2SCS6              	100.00%
Bootstrap support for Q5KLE3 as seed ortholog is 100%.
Bootstrap support for F2SCS6 as seed ortholog is 100%.

Group of orthologs #1526. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 T.rubrum:247

Q5K8U4              	100.00%		F2SPX2              	100.00%
Bootstrap support for Q5K8U4 as seed ortholog is 100%.
Bootstrap support for F2SPX2 as seed ortholog is 100%.

Group of orthologs #1527. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 T.rubrum:247

Q5KAR1              	100.00%		F2STF1              	100.00%
Bootstrap support for Q5KAR1 as seed ortholog is 100%.
Bootstrap support for F2STF1 as seed ortholog is 100%.

Group of orthologs #1528. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 T.rubrum:247

Q5KP95              	100.00%		F2SGW5              	100.00%
Bootstrap support for Q5KP95 as seed ortholog is 100%.
Bootstrap support for F2SGW5 as seed ortholog is 100%.

Group of orthologs #1529. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 T.rubrum:101

Q5KJ78              	100.00%		F2STQ7              	100.00%
Bootstrap support for Q5KJ78 as seed ortholog is 100%.
Bootstrap support for F2STQ7 as seed ortholog is 99%.

Group of orthologs #1530. Best score 247 bits
Score difference with first non-orthologous sequence - C.neoformans:247 T.rubrum:247

Q5KEL9              	100.00%		F2SYS2              	100.00%
Bootstrap support for Q5KEL9 as seed ortholog is 100%.
Bootstrap support for F2SYS2 as seed ortholog is 100%.

Group of orthologs #1531. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:246 T.rubrum:246

Q5K7I5              	100.00%		F2SFG9              	100.00%
Bootstrap support for Q5K7I5 as seed ortholog is 100%.
Bootstrap support for F2SFG9 as seed ortholog is 100%.

Group of orthologs #1532. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:246 T.rubrum:30

Q5KEP5              	100.00%		F2SHB3              	100.00%
Bootstrap support for Q5KEP5 as seed ortholog is 100%.
Bootstrap support for F2SHB3 as seed ortholog is 75%.

Group of orthologs #1533. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:246 T.rubrum:246

Q5KCZ9              	100.00%		F2SRD8              	100.00%
Bootstrap support for Q5KCZ9 as seed ortholog is 100%.
Bootstrap support for F2SRD8 as seed ortholog is 100%.

Group of orthologs #1534. Best score 246 bits
Score difference with first non-orthologous sequence - C.neoformans:246 T.rubrum:246

Q5KGT6              	100.00%		F2SR53              	100.00%
Bootstrap support for Q5KGT6 as seed ortholog is 100%.
Bootstrap support for F2SR53 as seed ortholog is 100%.

Group of orthologs #1535. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 T.rubrum:245

Q5K7F0              	100.00%		F2SEZ4              	100.00%
Bootstrap support for Q5K7F0 as seed ortholog is 100%.
Bootstrap support for F2SEZ4 as seed ortholog is 100%.

Group of orthologs #1536. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 T.rubrum:245

Q5K9Y2              	100.00%		F2SDB7              	100.00%
Bootstrap support for Q5K9Y2 as seed ortholog is 100%.
Bootstrap support for F2SDB7 as seed ortholog is 100%.

Group of orthologs #1537. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 T.rubrum:245

Q5KBW9              	100.00%		F2SD20              	100.00%
Bootstrap support for Q5KBW9 as seed ortholog is 100%.
Bootstrap support for F2SD20 as seed ortholog is 100%.

Group of orthologs #1538. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 T.rubrum:105

Q5KGJ0              	100.00%		F2SRJ6              	100.00%
Bootstrap support for Q5KGJ0 as seed ortholog is 100%.
Bootstrap support for F2SRJ6 as seed ortholog is 98%.

Group of orthologs #1539. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 T.rubrum:245

Q5KEW4              	100.00%		F2STC9              	100.00%
Bootstrap support for Q5KEW4 as seed ortholog is 100%.
Bootstrap support for F2STC9 as seed ortholog is 100%.

Group of orthologs #1540. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 T.rubrum:245

Q5KHA2              	100.00%		F2SU42              	100.00%
Bootstrap support for Q5KHA2 as seed ortholog is 100%.
Bootstrap support for F2SU42 as seed ortholog is 100%.

Group of orthologs #1541. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 T.rubrum:245

Q5KH50              	100.00%		F2SYH5              	100.00%
Bootstrap support for Q5KH50 as seed ortholog is 100%.
Bootstrap support for F2SYH5 as seed ortholog is 100%.

Group of orthologs #1542. Best score 245 bits
Score difference with first non-orthologous sequence - C.neoformans:245 T.rubrum:245

Q5KLT6              	100.00%		F2SY17              	100.00%
Bootstrap support for Q5KLT6 as seed ortholog is 100%.
Bootstrap support for F2SY17 as seed ortholog is 100%.

Group of orthologs #1543. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:21 T.rubrum:89

Q5KKZ8              	100.00%		F2SUT8              	100.00%
Q5KBU8              	11.73%		
Bootstrap support for Q5KKZ8 as seed ortholog is 71%.
Alternative seed ortholog is Q5K8C5 (21 bits away from this cluster)
Bootstrap support for F2SUT8 as seed ortholog is 99%.

Group of orthologs #1544. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:244 T.rubrum:244

Q5KQ88              	100.00%		F2SMT3              	100.00%
Bootstrap support for Q5KQ88 as seed ortholog is 100%.
Bootstrap support for F2SMT3 as seed ortholog is 100%.

Group of orthologs #1545. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:244 T.rubrum:244

Q5KB22              	100.00%		F2T1F0              	100.00%
Bootstrap support for Q5KB22 as seed ortholog is 100%.
Bootstrap support for F2T1F0 as seed ortholog is 100%.

Group of orthologs #1546. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:244 T.rubrum:244

Q5KH21              	100.00%		F2SZG5              	100.00%
Bootstrap support for Q5KH21 as seed ortholog is 100%.
Bootstrap support for F2SZG5 as seed ortholog is 100%.

Group of orthologs #1547. Best score 244 bits
Score difference with first non-orthologous sequence - C.neoformans:244 T.rubrum:244

Q5KJJ7              	100.00%		F2SZK2              	100.00%
Bootstrap support for Q5KJJ7 as seed ortholog is 100%.
Bootstrap support for F2SZK2 as seed ortholog is 100%.

Group of orthologs #1548. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:108 T.rubrum:191

Q5K773              	100.00%		F2SFQ2              	100.00%
Bootstrap support for Q5K773 as seed ortholog is 99%.
Bootstrap support for F2SFQ2 as seed ortholog is 100%.

Group of orthologs #1549. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:243 T.rubrum:243

Q5KDX6              	100.00%		F2SFB6              	100.00%
Bootstrap support for Q5KDX6 as seed ortholog is 100%.
Bootstrap support for F2SFB6 as seed ortholog is 100%.

Group of orthologs #1550. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:243 T.rubrum:243

Q5KK16              	100.00%		F2SPR4              	100.00%
Bootstrap support for Q5KK16 as seed ortholog is 100%.
Bootstrap support for F2SPR4 as seed ortholog is 100%.

Group of orthologs #1551. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:243 T.rubrum:243

Q5KIM1              	100.00%		F2SRR9              	100.00%
Bootstrap support for Q5KIM1 as seed ortholog is 100%.
Bootstrap support for F2SRR9 as seed ortholog is 100%.

Group of orthologs #1552. Best score 243 bits
Score difference with first non-orthologous sequence - C.neoformans:243 T.rubrum:243

Q5KNS2              	100.00%		F2SP99              	100.00%
Bootstrap support for Q5KNS2 as seed ortholog is 100%.
Bootstrap support for F2SP99 as seed ortholog is 100%.

Group of orthologs #1553. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:119 T.rubrum:20

Q5K7V1              	100.00%		F2SBW7              	100.00%
Bootstrap support for Q5K7V1 as seed ortholog is 99%.
Bootstrap support for F2SBW7 as seed ortholog is 67%.
Alternative seed ortholog is F2SSW5 (20 bits away from this cluster)

Group of orthologs #1554. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 T.rubrum:242

Q5KEP9              	100.00%		F2SJ36              	100.00%
Bootstrap support for Q5KEP9 as seed ortholog is 100%.
Bootstrap support for F2SJ36 as seed ortholog is 100%.

Group of orthologs #1555. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 T.rubrum:242

Q5KNF4              	100.00%		F2SCY6              	100.00%
Bootstrap support for Q5KNF4 as seed ortholog is 100%.
Bootstrap support for F2SCY6 as seed ortholog is 100%.

Group of orthologs #1556. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 T.rubrum:242

Q5KP27              	100.00%		F2SCR3              	100.00%
Bootstrap support for Q5KP27 as seed ortholog is 100%.
Bootstrap support for F2SCR3 as seed ortholog is 100%.

Group of orthologs #1557. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 T.rubrum:242

Q5K6Z1              	100.00%		F2SUB7              	100.00%
Bootstrap support for Q5K6Z1 as seed ortholog is 100%.
Bootstrap support for F2SUB7 as seed ortholog is 100%.

Group of orthologs #1558. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:171 T.rubrum:127

Q5KLC5              	100.00%		F2SHQ0              	100.00%
Bootstrap support for Q5KLC5 as seed ortholog is 100%.
Bootstrap support for F2SHQ0 as seed ortholog is 99%.

Group of orthologs #1559. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 T.rubrum:242

Q5K7P6              	100.00%		F2SVC6              	100.00%
Bootstrap support for Q5K7P6 as seed ortholog is 100%.
Bootstrap support for F2SVC6 as seed ortholog is 100%.

Group of orthologs #1560. Best score 242 bits
Score difference with first non-orthologous sequence - C.neoformans:242 T.rubrum:242

Q5KND4              	100.00%		F2SNZ0              	100.00%
Bootstrap support for Q5KND4 as seed ortholog is 100%.
Bootstrap support for F2SNZ0 as seed ortholog is 100%.

Group of orthologs #1561. Best score 241 bits
Score difference with first non-orthologous sequence - C.neoformans:149 T.rubrum:171

Q5KJK0              	100.00%		F2SVA0              	100.00%
Bootstrap support for Q5KJK0 as seed ortholog is 100%.
Bootstrap support for F2SVA0 as seed ortholog is 100%.

Group of orthologs #1562. Best score 241 bits
Score difference with first non-orthologous sequence - C.neoformans:241 T.rubrum:241

Q5KJG1              	100.00%		F2SZE9              	100.00%
Bootstrap support for Q5KJG1 as seed ortholog is 100%.
Bootstrap support for F2SZE9 as seed ortholog is 100%.

Group of orthologs #1563. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubrum:82

Q5KEG5              	100.00%		F2SHQ6              	100.00%
Q5KHA5              	57.93%		
Bootstrap support for Q5KEG5 as seed ortholog is 99%.
Bootstrap support for F2SHQ6 as seed ortholog is 98%.

Group of orthologs #1564. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 T.rubrum:240

Q5K8C7              	100.00%		F2SEW9              	100.00%
Bootstrap support for Q5K8C7 as seed ortholog is 100%.
Bootstrap support for F2SEW9 as seed ortholog is 100%.

Group of orthologs #1565. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 T.rubrum:240

P0CO26              	100.00%		F2SHE7              	100.00%
Bootstrap support for P0CO26 as seed ortholog is 100%.
Bootstrap support for F2SHE7 as seed ortholog is 100%.

Group of orthologs #1566. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:149 T.rubrum:181

Q5KDE0              	100.00%		F2SJR0              	100.00%
Bootstrap support for Q5KDE0 as seed ortholog is 99%.
Bootstrap support for F2SJR0 as seed ortholog is 100%.

Group of orthologs #1567. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:164 T.rubrum:149

Q5KAP0              	100.00%		F2SMC1              	100.00%
Bootstrap support for Q5KAP0 as seed ortholog is 100%.
Bootstrap support for F2SMC1 as seed ortholog is 100%.

Group of orthologs #1568. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 T.rubrum:101

Q5KLZ2              	100.00%		F2SFW0              	100.00%
Bootstrap support for Q5KLZ2 as seed ortholog is 100%.
Bootstrap support for F2SFW0 as seed ortholog is 99%.

Group of orthologs #1569. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 T.rubrum:240

Q5KCE5              	100.00%		F2SUH7              	100.00%
Bootstrap support for Q5KCE5 as seed ortholog is 100%.
Bootstrap support for F2SUH7 as seed ortholog is 100%.

Group of orthologs #1570. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 T.rubrum:190

Q5KKN1              	100.00%		F2SNN7              	100.00%
Bootstrap support for Q5KKN1 as seed ortholog is 100%.
Bootstrap support for F2SNN7 as seed ortholog is 100%.

Group of orthologs #1571. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 T.rubrum:240

Q5KC49              	100.00%		F2SYG7              	100.00%
Bootstrap support for Q5KC49 as seed ortholog is 100%.
Bootstrap support for F2SYG7 as seed ortholog is 100%.

Group of orthologs #1572. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 T.rubrum:240

Q5KJC9              	100.00%		F2SUM4              	100.00%
Bootstrap support for Q5KJC9 as seed ortholog is 100%.
Bootstrap support for F2SUM4 as seed ortholog is 100%.

Group of orthologs #1573. Best score 240 bits
Score difference with first non-orthologous sequence - C.neoformans:240 T.rubrum:173

Q5KCK9              	100.00%		F2T118              	100.00%
Bootstrap support for Q5KCK9 as seed ortholog is 100%.
Bootstrap support for F2T118 as seed ortholog is 100%.

Group of orthologs #1574. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:239 T.rubrum:239

Q5K8L4              	100.00%		F2SIX2              	100.00%
Bootstrap support for Q5K8L4 as seed ortholog is 100%.
Bootstrap support for F2SIX2 as seed ortholog is 100%.

Group of orthologs #1575. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:111 T.rubrum:179

Q5KAH8              	100.00%		F2SJB9              	100.00%
Bootstrap support for Q5KAH8 as seed ortholog is 99%.
Bootstrap support for F2SJB9 as seed ortholog is 99%.

Group of orthologs #1576. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:239 T.rubrum:239

Q5KCC1              	100.00%		F2SZW1              	100.00%
Bootstrap support for Q5KCC1 as seed ortholog is 100%.
Bootstrap support for F2SZW1 as seed ortholog is 100%.

Group of orthologs #1577. Best score 239 bits
Score difference with first non-orthologous sequence - C.neoformans:239 T.rubrum:239

Q5KGY0              	100.00%		F2SXP5              	100.00%
Bootstrap support for Q5KGY0 as seed ortholog is 100%.
Bootstrap support for F2SXP5 as seed ortholog is 100%.

Group of orthologs #1578. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 T.rubrum:238

Q5KDJ1              	100.00%		F2SD51              	100.00%
Bootstrap support for Q5KDJ1 as seed ortholog is 100%.
Bootstrap support for F2SD51 as seed ortholog is 100%.

Group of orthologs #1579. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 T.rubrum:238

Q5K974              	100.00%		F2SHD2              	100.00%
Bootstrap support for Q5K974 as seed ortholog is 100%.
Bootstrap support for F2SHD2 as seed ortholog is 100%.

Group of orthologs #1580. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 T.rubrum:238

P0CN10              	100.00%		F2SQX5              	100.00%
Bootstrap support for P0CN10 as seed ortholog is 100%.
Bootstrap support for F2SQX5 as seed ortholog is 100%.

Group of orthologs #1581. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 T.rubrum:238

Q5KGV8              	100.00%		F2SGA0              	100.00%
Bootstrap support for Q5KGV8 as seed ortholog is 100%.
Bootstrap support for F2SGA0 as seed ortholog is 100%.

Group of orthologs #1582. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 T.rubrum:238

P0CQ04              	100.00%		F2SX94              	100.00%
Bootstrap support for P0CQ04 as seed ortholog is 100%.
Bootstrap support for F2SX94 as seed ortholog is 100%.

Group of orthologs #1583. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 T.rubrum:238

Q5K9U9              	100.00%		F2SVV2              	100.00%
Bootstrap support for Q5K9U9 as seed ortholog is 100%.
Bootstrap support for F2SVV2 as seed ortholog is 100%.

Group of orthologs #1584. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 T.rubrum:238

Q5KHB9              	100.00%		F2SQQ1              	100.00%
Bootstrap support for Q5KHB9 as seed ortholog is 100%.
Bootstrap support for F2SQQ1 as seed ortholog is 100%.

Group of orthologs #1585. Best score 238 bits
Score difference with first non-orthologous sequence - C.neoformans:238 T.rubrum:238

Q5KN72              	100.00%		F2T1C0              	100.00%
Bootstrap support for Q5KN72 as seed ortholog is 100%.
Bootstrap support for F2T1C0 as seed ortholog is 100%.

Group of orthologs #1586. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:87 T.rubrum:136

P0CP84              	100.00%		F2SE01              	100.00%
Bootstrap support for P0CP84 as seed ortholog is 100%.
Bootstrap support for F2SE01 as seed ortholog is 100%.

Group of orthologs #1587. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:237 T.rubrum:237

Q5KEY0              	100.00%		F2SI51              	100.00%
Bootstrap support for Q5KEY0 as seed ortholog is 100%.
Bootstrap support for F2SI51 as seed ortholog is 100%.

Group of orthologs #1588. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:237 T.rubrum:237

P0CN92              	100.00%		F2SV42              	100.00%
Bootstrap support for P0CN92 as seed ortholog is 100%.
Bootstrap support for F2SV42 as seed ortholog is 100%.

Group of orthologs #1589. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:237 T.rubrum:237

Q5KBY9              	100.00%		F2SU07              	100.00%
Bootstrap support for Q5KBY9 as seed ortholog is 100%.
Bootstrap support for F2SU07 as seed ortholog is 100%.

Group of orthologs #1590. Best score 237 bits
Score difference with first non-orthologous sequence - C.neoformans:237 T.rubrum:237

Q5KIA3              	100.00%		F2SXQ4              	100.00%
Bootstrap support for Q5KIA3 as seed ortholog is 100%.
Bootstrap support for F2SXQ4 as seed ortholog is 100%.

Group of orthologs #1591. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:187 T.rubrum:236

Q5KJ08              	100.00%		F2SFA7              	100.00%
Bootstrap support for Q5KJ08 as seed ortholog is 100%.
Bootstrap support for F2SFA7 as seed ortholog is 100%.

Group of orthologs #1592. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:236 T.rubrum:236

Q5KET4              	100.00%		F2SKU8              	100.00%
Bootstrap support for Q5KET4 as seed ortholog is 100%.
Bootstrap support for F2SKU8 as seed ortholog is 100%.

Group of orthologs #1593. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:236 T.rubrum:29

Q5KGQ7              	100.00%		F2SLI7              	100.00%
Bootstrap support for Q5KGQ7 as seed ortholog is 100%.
Bootstrap support for F2SLI7 as seed ortholog is 77%.

Group of orthologs #1594. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:236 T.rubrum:236

P0CP64              	100.00%		F2SWZ1              	100.00%
Bootstrap support for P0CP64 as seed ortholog is 100%.
Bootstrap support for F2SWZ1 as seed ortholog is 100%.

Group of orthologs #1595. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:65 T.rubrum:236

Q5KK00              	100.00%		F2SNQ4              	100.00%
Bootstrap support for Q5KK00 as seed ortholog is 95%.
Bootstrap support for F2SNQ4 as seed ortholog is 100%.

Group of orthologs #1596. Best score 236 bits
Score difference with first non-orthologous sequence - C.neoformans:182 T.rubrum:236

Q5KPW9              	100.00%		F2T107              	100.00%
Bootstrap support for Q5KPW9 as seed ortholog is 99%.
Bootstrap support for F2T107 as seed ortholog is 100%.

Group of orthologs #1597. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 T.rubrum:235

Q5KG85              	100.00%		F2T0S4              	100.00%
Q5KG86              	53.87%		F2SQ48              	19.80%
Bootstrap support for Q5KG85 as seed ortholog is 100%.
Bootstrap support for F2T0S4 as seed ortholog is 100%.

Group of orthologs #1598. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 T.rubrum:235

Q5K9P5              	100.00%		F2SIP4              	100.00%
Bootstrap support for Q5K9P5 as seed ortholog is 100%.
Bootstrap support for F2SIP4 as seed ortholog is 100%.

Group of orthologs #1599. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 T.rubrum:235

P0CN66              	100.00%		F2SWA9              	100.00%
Bootstrap support for P0CN66 as seed ortholog is 100%.
Bootstrap support for F2SWA9 as seed ortholog is 100%.

Group of orthologs #1600. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 T.rubrum:235

Q5K8Z7              	100.00%		F2SXS6              	100.00%
Bootstrap support for Q5K8Z7 as seed ortholog is 100%.
Bootstrap support for F2SXS6 as seed ortholog is 100%.

Group of orthologs #1601. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 T.rubrum:235

Q5KF34              	100.00%		F2SXG8              	100.00%
Bootstrap support for Q5KF34 as seed ortholog is 100%.
Bootstrap support for F2SXG8 as seed ortholog is 100%.

Group of orthologs #1602. Best score 235 bits
Score difference with first non-orthologous sequence - C.neoformans:235 T.rubrum:235

Q5KN16              	100.00%		F2T1C2              	100.00%
Bootstrap support for Q5KN16 as seed ortholog is 100%.
Bootstrap support for F2T1C2 as seed ortholog is 100%.

Group of orthologs #1603. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:132 T.rubrum:114

P0CS16              	100.00%		F2SCY8              	100.00%
Bootstrap support for P0CS16 as seed ortholog is 100%.
Bootstrap support for F2SCY8 as seed ortholog is 100%.

Group of orthologs #1604. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:103 T.rubrum:105

Q5K7V8              	100.00%		F2SPT8              	100.00%
Bootstrap support for Q5K7V8 as seed ortholog is 97%.
Bootstrap support for F2SPT8 as seed ortholog is 98%.

Group of orthologs #1605. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:234 T.rubrum:189

Q5KNK6              	100.00%		F2SII9              	100.00%
Bootstrap support for Q5KNK6 as seed ortholog is 100%.
Bootstrap support for F2SII9 as seed ortholog is 99%.

Group of orthologs #1606. Best score 234 bits
Score difference with first non-orthologous sequence - C.neoformans:234 T.rubrum:234

Q5KKN8              	100.00%		F2T104              	100.00%
Bootstrap support for Q5KKN8 as seed ortholog is 100%.
Bootstrap support for F2T104 as seed ortholog is 100%.

Group of orthologs #1607. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:233 T.rubrum:233

Q5KAF5              	100.00%		F2SI10              	100.00%
Bootstrap support for Q5KAF5 as seed ortholog is 100%.
Bootstrap support for F2SI10 as seed ortholog is 100%.

Group of orthologs #1608. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:233 T.rubrum:233

Q5KMR3              	100.00%		F2SGK8              	100.00%
Bootstrap support for Q5KMR3 as seed ortholog is 100%.
Bootstrap support for F2SGK8 as seed ortholog is 100%.

Group of orthologs #1609. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:233 T.rubrum:233

Q5KP38              	100.00%		F2SMR4              	100.00%
Bootstrap support for Q5KP38 as seed ortholog is 100%.
Bootstrap support for F2SMR4 as seed ortholog is 100%.

Group of orthologs #1610. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:233 T.rubrum:233

Q5KIE7              	100.00%		F2SWA0              	100.00%
Bootstrap support for Q5KIE7 as seed ortholog is 100%.
Bootstrap support for F2SWA0 as seed ortholog is 100%.

Group of orthologs #1611. Best score 233 bits
Score difference with first non-orthologous sequence - C.neoformans:233 T.rubrum:233

Q5KIN9              	100.00%		F2SXK8              	100.00%
Bootstrap support for Q5KIN9 as seed ortholog is 100%.
Bootstrap support for F2SXK8 as seed ortholog is 100%.

Group of orthologs #1612. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 T.rubrum:232

P0CN62              	100.00%		F2SCD9              	100.00%
Bootstrap support for P0CN62 as seed ortholog is 100%.
Bootstrap support for F2SCD9 as seed ortholog is 100%.

Group of orthologs #1613. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 T.rubrum:232

Q5K6U9              	100.00%		F2SG68              	100.00%
Bootstrap support for Q5K6U9 as seed ortholog is 100%.
Bootstrap support for F2SG68 as seed ortholog is 100%.

Group of orthologs #1614. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 T.rubrum:232

Q5KBX4              	100.00%		F2SDZ3              	100.00%
Bootstrap support for Q5KBX4 as seed ortholog is 100%.
Bootstrap support for F2SDZ3 as seed ortholog is 100%.

Group of orthologs #1615. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 T.rubrum:232

Q5K6W6              	100.00%		F2SJQ7              	100.00%
Bootstrap support for Q5K6W6 as seed ortholog is 100%.
Bootstrap support for F2SJQ7 as seed ortholog is 100%.

Group of orthologs #1616. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubrum:179

Q5KEY2              	100.00%		F2SFC0              	100.00%
Bootstrap support for Q5KEY2 as seed ortholog is 97%.
Bootstrap support for F2SFC0 as seed ortholog is 99%.

Group of orthologs #1617. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:142 T.rubrum:149

Q5KAU2              	100.00%		F2SM40              	100.00%
Bootstrap support for Q5KAU2 as seed ortholog is 100%.
Bootstrap support for F2SM40 as seed ortholog is 100%.

Group of orthologs #1618. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubrum:94

P0CR04              	100.00%		F2SWS6              	100.00%
Bootstrap support for P0CR04 as seed ortholog is 98%.
Bootstrap support for F2SWS6 as seed ortholog is 96%.

Group of orthologs #1619. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 T.rubrum:232

Q5KN41              	100.00%		F2SN45              	100.00%
Bootstrap support for Q5KN41 as seed ortholog is 100%.
Bootstrap support for F2SN45 as seed ortholog is 100%.

Group of orthologs #1620. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 T.rubrum:155

Q5KN84              	100.00%		F2SSP9              	100.00%
Bootstrap support for Q5KN84 as seed ortholog is 100%.
Bootstrap support for F2SSP9 as seed ortholog is 99%.

Group of orthologs #1621. Best score 232 bits
Score difference with first non-orthologous sequence - C.neoformans:232 T.rubrum:232

Q5KMU1              	100.00%		F2STV8              	100.00%
Bootstrap support for Q5KMU1 as seed ortholog is 100%.
Bootstrap support for F2STV8 as seed ortholog is 100%.

Group of orthologs #1622. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:92 T.rubrum:97

Q5KGH7              	100.00%		F2SFP9              	100.00%
Q5KGH9              	32.69%		
Q5KGH8              	30.56%		
Bootstrap support for Q5KGH7 as seed ortholog is 99%.
Bootstrap support for F2SFP9 as seed ortholog is 99%.

Group of orthologs #1623. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubrum:179

Q5KE25              	100.00%		F2SDT8              	100.00%
Bootstrap support for Q5KE25 as seed ortholog is 99%.
Bootstrap support for F2SDT8 as seed ortholog is 100%.

Group of orthologs #1624. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:231 T.rubrum:231

Q5KAS2              	100.00%		F2SHT3              	100.00%
Bootstrap support for Q5KAS2 as seed ortholog is 100%.
Bootstrap support for F2SHT3 as seed ortholog is 100%.

Group of orthologs #1625. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:161 T.rubrum:141

Q5KB48              	100.00%		F2SPL2              	100.00%
Bootstrap support for Q5KB48 as seed ortholog is 99%.
Bootstrap support for F2SPL2 as seed ortholog is 99%.

Group of orthologs #1626. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:231 T.rubrum:231

Q5KH08              	100.00%		F2SQ05              	100.00%
Bootstrap support for Q5KH08 as seed ortholog is 100%.
Bootstrap support for F2SQ05 as seed ortholog is 100%.

Group of orthologs #1627. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:160 T.rubrum:231

Q5KLT0              	100.00%		F2SKQ3              	100.00%
Bootstrap support for Q5KLT0 as seed ortholog is 99%.
Bootstrap support for F2SKQ3 as seed ortholog is 100%.

Group of orthologs #1628. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:231 T.rubrum:231

Q5K9K8              	100.00%		F2T0Z1              	100.00%
Bootstrap support for Q5K9K8 as seed ortholog is 100%.
Bootstrap support for F2T0Z1 as seed ortholog is 100%.

Group of orthologs #1629. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:231 T.rubrum:231

Q5KGQ0              	100.00%		F2T0F4              	100.00%
Bootstrap support for Q5KGQ0 as seed ortholog is 100%.
Bootstrap support for F2T0F4 as seed ortholog is 100%.

Group of orthologs #1630. Best score 231 bits
Score difference with first non-orthologous sequence - C.neoformans:231 T.rubrum:231

Q5KIH9              	100.00%		F2SZG3              	100.00%
Bootstrap support for Q5KIH9 as seed ortholog is 100%.
Bootstrap support for F2SZG3 as seed ortholog is 100%.

Group of orthologs #1631. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 T.rubrum:160

Q5KGT7              	100.00%		F2SGR8              	100.00%
Q5K9Z3              	38.42%		
Bootstrap support for Q5KGT7 as seed ortholog is 100%.
Bootstrap support for F2SGR8 as seed ortholog is 99%.

Group of orthologs #1632. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 T.rubrum:230

Q5K7N0              	100.00%		F2SF74              	100.00%
Bootstrap support for Q5K7N0 as seed ortholog is 100%.
Bootstrap support for F2SF74 as seed ortholog is 100%.

Group of orthologs #1633. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 T.rubrum:230

Q5KAB6              	100.00%		F2SGW0              	100.00%
Bootstrap support for Q5KAB6 as seed ortholog is 100%.
Bootstrap support for F2SGW0 as seed ortholog is 100%.

Group of orthologs #1634. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 T.rubrum:230

Q5KGB2              	100.00%		F2SC86              	100.00%
Bootstrap support for Q5KGB2 as seed ortholog is 100%.
Bootstrap support for F2SC86 as seed ortholog is 100%.

Group of orthologs #1635. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 T.rubrum:230

Q5KL20              	100.00%		F2SET0              	100.00%
Bootstrap support for Q5KL20 as seed ortholog is 100%.
Bootstrap support for F2SET0 as seed ortholog is 100%.

Group of orthologs #1636. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 T.rubrum:230

Q5KKU8              	100.00%		F2SNX4              	100.00%
Bootstrap support for Q5KKU8 as seed ortholog is 100%.
Bootstrap support for F2SNX4 as seed ortholog is 100%.

Group of orthologs #1637. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 T.rubrum:230

Q5KCC7              	100.00%		F2SXL3              	100.00%
Bootstrap support for Q5KCC7 as seed ortholog is 100%.
Bootstrap support for F2SXL3 as seed ortholog is 100%.

Group of orthologs #1638. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 T.rubrum:230

Q5KA46              	100.00%		F2T0B4              	100.00%
Bootstrap support for Q5KA46 as seed ortholog is 100%.
Bootstrap support for F2T0B4 as seed ortholog is 100%.

Group of orthologs #1639. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 T.rubrum:230

Q5KK68              	100.00%		F2STJ7              	100.00%
Bootstrap support for Q5KK68 as seed ortholog is 100%.
Bootstrap support for F2STJ7 as seed ortholog is 100%.

Group of orthologs #1640. Best score 230 bits
Score difference with first non-orthologous sequence - C.neoformans:230 T.rubrum:230

Q5KGF9              	100.00%		F2T154              	100.00%
Bootstrap support for Q5KGF9 as seed ortholog is 100%.
Bootstrap support for F2T154 as seed ortholog is 100%.

Group of orthologs #1641. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:60 T.rubrum:178

Q5KI42              	100.00%		F2SCH1              	100.00%
Bootstrap support for Q5KI42 as seed ortholog is 98%.
Bootstrap support for F2SCH1 as seed ortholog is 100%.

Group of orthologs #1642. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:187 T.rubrum:135

P0CR34              	100.00%		F2SQ71              	100.00%
Bootstrap support for P0CR34 as seed ortholog is 100%.
Bootstrap support for F2SQ71 as seed ortholog is 99%.

Group of orthologs #1643. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:229 T.rubrum:229

Q5KGY4              	100.00%		F2SLM8              	100.00%
Bootstrap support for Q5KGY4 as seed ortholog is 100%.
Bootstrap support for F2SLM8 as seed ortholog is 100%.

Group of orthologs #1644. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubrum:229

Q5KGR6              	100.00%		F2SNP8              	100.00%
Bootstrap support for Q5KGR6 as seed ortholog is 99%.
Bootstrap support for F2SNP8 as seed ortholog is 100%.

Group of orthologs #1645. Best score 229 bits
Score difference with first non-orthologous sequence - C.neoformans:170 T.rubrum:152

Q5KN20              	100.00%		F2SYJ0              	100.00%
Bootstrap support for Q5KN20 as seed ortholog is 99%.
Bootstrap support for F2SYJ0 as seed ortholog is 99%.

Group of orthologs #1646. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubrum:149

Q5KIS7              	100.00%		F2SDB5              	100.00%
Bootstrap support for Q5KIS7 as seed ortholog is 98%.
Bootstrap support for F2SDB5 as seed ortholog is 99%.

Group of orthologs #1647. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 T.rubrum:228

Q5KFB5              	100.00%		F2SKT6              	100.00%
Bootstrap support for Q5KFB5 as seed ortholog is 100%.
Bootstrap support for F2SKT6 as seed ortholog is 100%.

Group of orthologs #1648. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 T.rubrum:228

Q5KFS4              	100.00%		F2SLG5              	100.00%
Bootstrap support for Q5KFS4 as seed ortholog is 100%.
Bootstrap support for F2SLG5 as seed ortholog is 100%.

Group of orthologs #1649. Best score 228 bits
Score difference with first non-orthologous sequence - C.neoformans:228 T.rubrum:228

Q5KL73              	100.00%		F2SMN3              	100.00%
Bootstrap support for Q5KL73 as seed ortholog is 100%.
Bootstrap support for F2SMN3 as seed ortholog is 100%.

Group of orthologs #1650. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 T.rubrum:227

P0CO04              	100.00%		F2SML6              	100.00%
Q5KMT3              	64.10%		
Bootstrap support for P0CO04 as seed ortholog is 100%.
Bootstrap support for F2SML6 as seed ortholog is 100%.

Group of orthologs #1651. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:145 T.rubrum:73

Q5KBT2              	100.00%		F2SWP8              	100.00%
Q5KBM6              	12.96%		
Bootstrap support for Q5KBT2 as seed ortholog is 99%.
Bootstrap support for F2SWP8 as seed ortholog is 83%.

Group of orthologs #1652. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubrum:179

Q5KCQ1              	100.00%		F2T088              	100.00%
Q5KQ01              	100.00%		
Bootstrap support for Q5KCQ1 as seed ortholog is 92%.
Bootstrap support for Q5KQ01 as seed ortholog is 91%.
Bootstrap support for F2T088 as seed ortholog is 99%.

Group of orthologs #1653. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:104 T.rubrum:75

Q5KG67              	100.00%		F2SDC8              	100.00%
Bootstrap support for Q5KG67 as seed ortholog is 99%.
Bootstrap support for F2SDC8 as seed ortholog is 99%.

Group of orthologs #1654. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 T.rubrum:141

Q5KFV8              	100.00%		F2SHS0              	100.00%
Bootstrap support for Q5KFV8 as seed ortholog is 100%.
Bootstrap support for F2SHS0 as seed ortholog is 99%.

Group of orthologs #1655. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 T.rubrum:227

Q5KEQ2              	100.00%		F2SK17              	100.00%
Bootstrap support for Q5KEQ2 as seed ortholog is 100%.
Bootstrap support for F2SK17 as seed ortholog is 100%.

Group of orthologs #1656. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 T.rubrum:95

Q5KK51              	100.00%		F2SGK1              	100.00%
Bootstrap support for Q5KK51 as seed ortholog is 100%.
Bootstrap support for F2SGK1 as seed ortholog is 98%.

Group of orthologs #1657. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 T.rubrum:227

Q5KG24              	100.00%		F2SKJ0              	100.00%
Bootstrap support for Q5KG24 as seed ortholog is 100%.
Bootstrap support for F2SKJ0 as seed ortholog is 100%.

Group of orthologs #1658. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 T.rubrum:227

Q5K8R7              	100.00%		F2SSP2              	100.00%
Bootstrap support for Q5K8R7 as seed ortholog is 100%.
Bootstrap support for F2SSP2 as seed ortholog is 100%.

Group of orthologs #1659. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 T.rubrum:227

P0CP10              	100.00%		F2SXL5              	100.00%
Bootstrap support for P0CP10 as seed ortholog is 100%.
Bootstrap support for F2SXL5 as seed ortholog is 100%.

Group of orthologs #1660. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:41 T.rubrum:176

Q5KCJ5              	100.00%		F2STJ1              	100.00%
Bootstrap support for Q5KCJ5 as seed ortholog is 85%.
Bootstrap support for F2STJ1 as seed ortholog is 99%.

Group of orthologs #1661. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 T.rubrum:227

Q5KQ17              	100.00%		F2SHW4              	100.00%
Bootstrap support for Q5KQ17 as seed ortholog is 100%.
Bootstrap support for F2SHW4 as seed ortholog is 100%.

Group of orthologs #1662. Best score 227 bits
Score difference with first non-orthologous sequence - C.neoformans:227 T.rubrum:227

Q5KGP0              	100.00%		F2T0R7              	100.00%
Bootstrap support for Q5KGP0 as seed ortholog is 100%.
Bootstrap support for F2T0R7 as seed ortholog is 100%.

Group of orthologs #1663. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:226 T.rubrum:226

Q5KGD2              	100.00%		F2SUH1              	100.00%
Q5KID2              	16.85%		
Bootstrap support for Q5KGD2 as seed ortholog is 100%.
Bootstrap support for F2SUH1 as seed ortholog is 100%.

Group of orthologs #1664. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:226 T.rubrum:226

P0CN78              	100.00%		F2SEP9              	100.00%
Bootstrap support for P0CN78 as seed ortholog is 100%.
Bootstrap support for F2SEP9 as seed ortholog is 100%.

Group of orthologs #1665. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:226 T.rubrum:226

Q5K9H3              	100.00%		F2SED8              	100.00%
Bootstrap support for Q5K9H3 as seed ortholog is 100%.
Bootstrap support for F2SED8 as seed ortholog is 100%.

Group of orthologs #1666. Best score 226 bits
Score difference with first non-orthologous sequence - C.neoformans:226 T.rubrum:226

Q5KE84              	100.00%		F2T0Y9              	100.00%
Bootstrap support for Q5KE84 as seed ortholog is 100%.
Bootstrap support for F2T0Y9 as seed ortholog is 100%.

Group of orthologs #1667. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:45 T.rubrum:155

Q5KMM0              	100.00%		F2SWD8              	100.00%
Q5KML4              	47.92%		
Bootstrap support for Q5KMM0 as seed ortholog is 95%.
Bootstrap support for F2SWD8 as seed ortholog is 100%.

Group of orthologs #1668. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:87 T.rubrum:105

Q5KGE7              	100.00%		F2SDX7              	100.00%
Bootstrap support for Q5KGE7 as seed ortholog is 99%.
Bootstrap support for F2SDX7 as seed ortholog is 100%.

Group of orthologs #1669. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 T.rubrum:225

Q5KIF5              	100.00%		F2SFV7              	100.00%
Bootstrap support for Q5KIF5 as seed ortholog is 100%.
Bootstrap support for F2SFV7 as seed ortholog is 100%.

Group of orthologs #1670. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 T.rubrum:225

Q5KJL2              	100.00%		F2SES9              	100.00%
Bootstrap support for Q5KJL2 as seed ortholog is 100%.
Bootstrap support for F2SES9 as seed ortholog is 100%.

Group of orthologs #1671. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 T.rubrum:225

P0CO62              	100.00%		F2SUQ6              	100.00%
Bootstrap support for P0CO62 as seed ortholog is 100%.
Bootstrap support for F2SUQ6 as seed ortholog is 100%.

Group of orthologs #1672. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:150 T.rubrum:225

Q5K9Z8              	100.00%		F2SSQ0              	100.00%
Bootstrap support for Q5K9Z8 as seed ortholog is 99%.
Bootstrap support for F2SSQ0 as seed ortholog is 100%.

Group of orthologs #1673. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 T.rubrum:225

Q5K700              	100.00%		F2SWX9              	100.00%
Bootstrap support for Q5K700 as seed ortholog is 100%.
Bootstrap support for F2SWX9 as seed ortholog is 100%.

Group of orthologs #1674. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 T.rubrum:225

Q5KLV7              	100.00%		F2SKV7              	100.00%
Bootstrap support for Q5KLV7 as seed ortholog is 100%.
Bootstrap support for F2SKV7 as seed ortholog is 100%.

Group of orthologs #1675. Best score 225 bits
Score difference with first non-orthologous sequence - C.neoformans:225 T.rubrum:225

Q5KHT0              	100.00%		F2SQN5              	100.00%
Bootstrap support for Q5KHT0 as seed ortholog is 100%.
Bootstrap support for F2SQN5 as seed ortholog is 100%.

Group of orthologs #1676. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:224 T.rubrum:3

Q5KEA0              	100.00%		F2SMD3              	100.00%
Q5KE99              	36.20%		
Bootstrap support for Q5KEA0 as seed ortholog is 100%.
Bootstrap support for F2SMD3 as seed ortholog is 54%.
Alternative seed ortholog is F2SYF3 (3 bits away from this cluster)

Group of orthologs #1677. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:224 T.rubrum:224

Q5KFF3              	100.00%		F2SF70              	100.00%
Bootstrap support for Q5KFF3 as seed ortholog is 100%.
Bootstrap support for F2SF70 as seed ortholog is 100%.

Group of orthologs #1678. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:224 T.rubrum:224

Q5KGP9              	100.00%		F2SMQ8              	100.00%
Bootstrap support for Q5KGP9 as seed ortholog is 100%.
Bootstrap support for F2SMQ8 as seed ortholog is 100%.

Group of orthologs #1679. Best score 224 bits
Score difference with first non-orthologous sequence - C.neoformans:224 T.rubrum:224

Q5KK93              	100.00%		F2SP14              	100.00%
Bootstrap support for Q5KK93 as seed ortholog is 100%.
Bootstrap support for F2SP14 as seed ortholog is 100%.

Group of orthologs #1680. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 T.rubrum:223

P0CR60              	100.00%		F2SGY4              	100.00%
Bootstrap support for P0CR60 as seed ortholog is 100%.
Bootstrap support for F2SGY4 as seed ortholog is 100%.

Group of orthologs #1681. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 T.rubrum:223

Q5KB21              	100.00%		F2SH01              	100.00%
Bootstrap support for Q5KB21 as seed ortholog is 100%.
Bootstrap support for F2SH01 as seed ortholog is 100%.

Group of orthologs #1682. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 T.rubrum:223

Q5KI19              	100.00%		F2SDD6              	100.00%
Bootstrap support for Q5KI19 as seed ortholog is 100%.
Bootstrap support for F2SDD6 as seed ortholog is 100%.

Group of orthologs #1683. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 T.rubrum:223

Q5K868              	100.00%		F2SV33              	100.00%
Bootstrap support for Q5K868 as seed ortholog is 100%.
Bootstrap support for F2SV33 as seed ortholog is 100%.

Group of orthologs #1684. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 T.rubrum:223

Q5KG59              	100.00%		F2STV0              	100.00%
Bootstrap support for Q5KG59 as seed ortholog is 100%.
Bootstrap support for F2STV0 as seed ortholog is 100%.

Group of orthologs #1685. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:139 T.rubrum:223

Q5KAM1              	100.00%		F2T0N7              	100.00%
Bootstrap support for Q5KAM1 as seed ortholog is 100%.
Bootstrap support for F2T0N7 as seed ortholog is 100%.

Group of orthologs #1686. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 T.rubrum:223

Q5KIJ0              	100.00%		F2SUX9              	100.00%
Bootstrap support for Q5KIJ0 as seed ortholog is 100%.
Bootstrap support for F2SUX9 as seed ortholog is 100%.

Group of orthologs #1687. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 T.rubrum:223

Q5KNF1              	100.00%		F2SQN3              	100.00%
Bootstrap support for Q5KNF1 as seed ortholog is 100%.
Bootstrap support for F2SQN3 as seed ortholog is 100%.

Group of orthologs #1688. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 T.rubrum:223

Q5KNB6              	100.00%		F2SVC3              	100.00%
Bootstrap support for Q5KNB6 as seed ortholog is 100%.
Bootstrap support for F2SVC3 as seed ortholog is 100%.

Group of orthologs #1689. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 T.rubrum:223

Q5KJ55              	100.00%		F2SZ69              	100.00%
Bootstrap support for Q5KJ55 as seed ortholog is 100%.
Bootstrap support for F2SZ69 as seed ortholog is 100%.

Group of orthologs #1690. Best score 223 bits
Score difference with first non-orthologous sequence - C.neoformans:223 T.rubrum:223

Q5KLM2              	100.00%		F2T0P7              	100.00%
Bootstrap support for Q5KLM2 as seed ortholog is 100%.
Bootstrap support for F2T0P7 as seed ortholog is 100%.

Group of orthologs #1691. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 T.rubrum:222

Q5KLM0              	100.00%		F2SBY2              	100.00%
Bootstrap support for Q5KLM0 as seed ortholog is 100%.
Bootstrap support for F2SBY2 as seed ortholog is 100%.

Group of orthologs #1692. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 T.rubrum:222

Q5K851              	100.00%		F2SR08              	100.00%
Bootstrap support for Q5K851 as seed ortholog is 100%.
Bootstrap support for F2SR08 as seed ortholog is 100%.

Group of orthologs #1693. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 T.rubrum:39

Q5KPF5              	100.00%		F2SH05              	100.00%
Bootstrap support for Q5KPF5 as seed ortholog is 100%.
Bootstrap support for F2SH05 as seed ortholog is 96%.

Group of orthologs #1694. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 T.rubrum:222

Q5KNU5              	100.00%		F2SQX2              	100.00%
Bootstrap support for Q5KNU5 as seed ortholog is 100%.
Bootstrap support for F2SQX2 as seed ortholog is 100%.

Group of orthologs #1695. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 T.rubrum:222

Q5KKQ0              	100.00%		F2SV66              	100.00%
Bootstrap support for Q5KKQ0 as seed ortholog is 100%.
Bootstrap support for F2SV66 as seed ortholog is 100%.

Group of orthologs #1696. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 T.rubrum:222

Q5KIG1              	100.00%		F2T0W2              	100.00%
Bootstrap support for Q5KIG1 as seed ortholog is 100%.
Bootstrap support for F2T0W2 as seed ortholog is 100%.

Group of orthologs #1697. Best score 222 bits
Score difference with first non-orthologous sequence - C.neoformans:222 T.rubrum:137

Q5KPI4              	100.00%		F2SZ97              	100.00%
Bootstrap support for Q5KPI4 as seed ortholog is 100%.
Bootstrap support for F2SZ97 as seed ortholog is 100%.

Group of orthologs #1698. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 T.rubrum:221

P0CP98              	100.00%		F2SK27              	100.00%
Bootstrap support for P0CP98 as seed ortholog is 100%.
Bootstrap support for F2SK27 as seed ortholog is 100%.

Group of orthologs #1699. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:64 T.rubrum:130

Q5KCL3              	100.00%		F2SMQ2              	100.00%
Bootstrap support for Q5KCL3 as seed ortholog is 97%.
Bootstrap support for F2SMQ2 as seed ortholog is 99%.

Group of orthologs #1700. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 T.rubrum:221

Q5KA33              	100.00%		F2SSV5              	100.00%
Bootstrap support for Q5KA33 as seed ortholog is 100%.
Bootstrap support for F2SSV5 as seed ortholog is 100%.

Group of orthologs #1701. Best score 221 bits
Score difference with first non-orthologous sequence - C.neoformans:221 T.rubrum:8

Q5KJZ5              	100.00%		F2SZ50              	100.00%
Bootstrap support for Q5KJZ5 as seed ortholog is 100%.
Bootstrap support for F2SZ50 as seed ortholog is 57%.
Alternative seed ortholog is F2SJ88 (8 bits away from this cluster)

Group of orthologs #1702. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 T.rubrum:220

Q5KLR2              	100.00%		F2T0Q8              	100.00%
Q5KLQ4              	48.76%		
Bootstrap support for Q5KLR2 as seed ortholog is 100%.
Bootstrap support for F2T0Q8 as seed ortholog is 100%.

Group of orthologs #1703. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:119 T.rubrum:220

Q5K8R0              	100.00%		F2SE11              	100.00%
Bootstrap support for Q5K8R0 as seed ortholog is 99%.
Bootstrap support for F2SE11 as seed ortholog is 100%.

Group of orthologs #1704. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 T.rubrum:220

Q5KFP2              	100.00%		F2SHD4              	100.00%
Bootstrap support for Q5KFP2 as seed ortholog is 100%.
Bootstrap support for F2SHD4 as seed ortholog is 100%.

Group of orthologs #1705. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 T.rubrum:220

Q5KAG9              	100.00%		F2SMY7              	100.00%
Bootstrap support for Q5KAG9 as seed ortholog is 100%.
Bootstrap support for F2SMY7 as seed ortholog is 100%.

Group of orthologs #1706. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 T.rubrum:220

Q5KJS4              	100.00%		F2SEQ9              	100.00%
Bootstrap support for Q5KJS4 as seed ortholog is 100%.
Bootstrap support for F2SEQ9 as seed ortholog is 100%.

Group of orthologs #1707. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 T.rubrum:220

Q5K9D0              	100.00%		F2SX61              	100.00%
Bootstrap support for Q5K9D0 as seed ortholog is 100%.
Bootstrap support for F2SX61 as seed ortholog is 100%.

Group of orthologs #1708. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 T.rubrum:220

Q5KGS7              	100.00%		F2SUK5              	100.00%
Bootstrap support for Q5KGS7 as seed ortholog is 100%.
Bootstrap support for F2SUK5 as seed ortholog is 100%.

Group of orthologs #1709. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 T.rubrum:220

Q5KM57              	100.00%		F2SRV8              	100.00%
Bootstrap support for Q5KM57 as seed ortholog is 100%.
Bootstrap support for F2SRV8 as seed ortholog is 100%.

Group of orthologs #1710. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:220 T.rubrum:220

Q5KGR4              	100.00%		F2SXE3              	100.00%
Bootstrap support for Q5KGR4 as seed ortholog is 100%.
Bootstrap support for F2SXE3 as seed ortholog is 100%.

Group of orthologs #1711. Best score 220 bits
Score difference with first non-orthologous sequence - C.neoformans:6 T.rubrum:220

Q5KQ12              	100.00%		F2SWR4              	100.00%
Bootstrap support for Q5KQ12 as seed ortholog is 55%.
Alternative seed ortholog is Q5KN14 (6 bits away from this cluster)
Bootstrap support for F2SWR4 as seed ortholog is 100%.

Group of orthologs #1712. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:132 T.rubrum:155

Q5KDN6              	100.00%		F2SNJ1              	100.00%
Bootstrap support for Q5KDN6 as seed ortholog is 99%.
Bootstrap support for F2SNJ1 as seed ortholog is 99%.

Group of orthologs #1713. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:219 T.rubrum:219

Q5KIW7              	100.00%		F2SN23              	100.00%
Bootstrap support for Q5KIW7 as seed ortholog is 100%.
Bootstrap support for F2SN23 as seed ortholog is 100%.

Group of orthologs #1714. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:219 T.rubrum:219

Q5KHP1              	100.00%		F2SPQ1              	100.00%
Bootstrap support for Q5KHP1 as seed ortholog is 100%.
Bootstrap support for F2SPQ1 as seed ortholog is 100%.

Group of orthologs #1715. Best score 219 bits
Score difference with first non-orthologous sequence - C.neoformans:219 T.rubrum:219

Q5KIL7              	100.00%		F2T0X9              	100.00%
Bootstrap support for Q5KIL7 as seed ortholog is 100%.
Bootstrap support for F2T0X9 as seed ortholog is 100%.

Group of orthologs #1716. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 T.rubrum:32

Q5KGB9              	100.00%		F2SJD1              	100.00%
                    	       		F2SC15              	11.36%
Bootstrap support for Q5KGB9 as seed ortholog is 100%.
Bootstrap support for F2SJD1 as seed ortholog is 77%.

Group of orthologs #1717. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 T.rubrum:218

Q5KNR2              	100.00%		F2SNG9              	100.00%
                    	       		F2SVJ2              	12.40%
Bootstrap support for Q5KNR2 as seed ortholog is 100%.
Bootstrap support for F2SNG9 as seed ortholog is 100%.

Group of orthologs #1718. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 T.rubrum:218

Q5K9Q5              	100.00%		F2STX1              	100.00%
Bootstrap support for Q5K9Q5 as seed ortholog is 100%.
Bootstrap support for F2STX1 as seed ortholog is 100%.

Group of orthologs #1719. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 T.rubrum:218

Q5KD61              	100.00%		F2SXZ9              	100.00%
Bootstrap support for Q5KD61 as seed ortholog is 100%.
Bootstrap support for F2SXZ9 as seed ortholog is 100%.

Group of orthologs #1720. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 T.rubrum:218

Q5KF90              	100.00%		F2SXB3              	100.00%
Bootstrap support for Q5KF90 as seed ortholog is 100%.
Bootstrap support for F2SXB3 as seed ortholog is 100%.

Group of orthologs #1721. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 T.rubrum:218

Q5KH24              	100.00%		F2SXY6              	100.00%
Bootstrap support for Q5KH24 as seed ortholog is 100%.
Bootstrap support for F2SXY6 as seed ortholog is 100%.

Group of orthologs #1722. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 T.rubrum:218

Q5KNH2              	100.00%		F2STM7              	100.00%
Bootstrap support for Q5KNH2 as seed ortholog is 100%.
Bootstrap support for F2STM7 as seed ortholog is 100%.

Group of orthologs #1723. Best score 218 bits
Score difference with first non-orthologous sequence - C.neoformans:218 T.rubrum:218

Q5KKD0              	100.00%		F2SY64              	100.00%
Bootstrap support for Q5KKD0 as seed ortholog is 100%.
Bootstrap support for F2SY64 as seed ortholog is 100%.

Group of orthologs #1724. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:19 T.rubrum:10

Q5KK76              	100.00%		F2SYM0              	100.00%
                    	       		F2SBX8              	18.49%
Bootstrap support for Q5KK76 as seed ortholog is 71%.
Alternative seed ortholog is Q5KBM7 (19 bits away from this cluster)
Bootstrap support for F2SYM0 as seed ortholog is 62%.
Alternative seed ortholog is F2SCF9 (10 bits away from this cluster)

Group of orthologs #1725. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 T.rubrum:217

Q5KC13              	100.00%		F2SEA9              	100.00%
Bootstrap support for Q5KC13 as seed ortholog is 100%.
Bootstrap support for F2SEA9 as seed ortholog is 100%.

Group of orthologs #1726. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 T.rubrum:217

P0CO82              	100.00%		F2SJZ6              	100.00%
Bootstrap support for P0CO82 as seed ortholog is 100%.
Bootstrap support for F2SJZ6 as seed ortholog is 100%.

Group of orthologs #1727. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 T.rubrum:217

Q5KBG5              	100.00%		F2SLX4              	100.00%
Bootstrap support for Q5KBG5 as seed ortholog is 100%.
Bootstrap support for F2SLX4 as seed ortholog is 100%.

Group of orthologs #1728. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 T.rubrum:92

P0CO54              	100.00%		F2SU31              	100.00%
Bootstrap support for P0CO54 as seed ortholog is 100%.
Bootstrap support for F2SU31 as seed ortholog is 100%.

Group of orthologs #1729. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 T.rubrum:217

Q5KGY1              	100.00%		F2SJC8              	100.00%
Bootstrap support for Q5KGY1 as seed ortholog is 100%.
Bootstrap support for F2SJC8 as seed ortholog is 100%.

Group of orthologs #1730. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 T.rubrum:217

Q5KIF8              	100.00%		F2SJ74              	100.00%
Bootstrap support for Q5KIF8 as seed ortholog is 100%.
Bootstrap support for F2SJ74 as seed ortholog is 100%.

Group of orthologs #1731. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 T.rubrum:217

Q5KMI0              	100.00%		F2SK48              	100.00%
Bootstrap support for Q5KMI0 as seed ortholog is 100%.
Bootstrap support for F2SK48 as seed ortholog is 100%.

Group of orthologs #1732. Best score 217 bits
Score difference with first non-orthologous sequence - C.neoformans:217 T.rubrum:217

Q5KK62              	100.00%		F2SQJ3              	100.00%
Bootstrap support for Q5KK62 as seed ortholog is 100%.
Bootstrap support for F2SQJ3 as seed ortholog is 100%.

Group of orthologs #1733. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:135 T.rubrum:216

Q5K6W9              	100.00%		F2SNU3              	100.00%
Bootstrap support for Q5K6W9 as seed ortholog is 99%.
Bootstrap support for F2SNU3 as seed ortholog is 100%.

Group of orthologs #1734. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:216 T.rubrum:216

Q5KAW3              	100.00%		F2SRX1              	100.00%
Bootstrap support for Q5KAW3 as seed ortholog is 100%.
Bootstrap support for F2SRX1 as seed ortholog is 100%.

Group of orthologs #1735. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:216 T.rubrum:216

Q5KP07              	100.00%		F2SG00              	100.00%
Bootstrap support for Q5KP07 as seed ortholog is 100%.
Bootstrap support for F2SG00 as seed ortholog is 100%.

Group of orthologs #1736. Best score 216 bits
Score difference with first non-orthologous sequence - C.neoformans:216 T.rubrum:216

Q5KIB6              	100.00%		F2SSA9              	100.00%
Bootstrap support for Q5KIB6 as seed ortholog is 100%.
Bootstrap support for F2SSA9 as seed ortholog is 100%.

Group of orthologs #1737. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 T.rubrum:215

Q5KBW6              	100.00%		F2SBX2              	100.00%
Bootstrap support for Q5KBW6 as seed ortholog is 100%.
Bootstrap support for F2SBX2 as seed ortholog is 100%.

Group of orthologs #1738. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:63 T.rubrum:134

P0CP82              	100.00%		F2SIM1              	100.00%
Bootstrap support for P0CP82 as seed ortholog is 99%.
Bootstrap support for F2SIM1 as seed ortholog is 99%.

Group of orthologs #1739. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 T.rubrum:215

Q5KJD1              	100.00%		F2SGG4              	100.00%
Bootstrap support for Q5KJD1 as seed ortholog is 100%.
Bootstrap support for F2SGG4 as seed ortholog is 100%.

Group of orthologs #1740. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubrum:133

Q5KBK7              	100.00%		F2SNT6              	100.00%
Bootstrap support for Q5KBK7 as seed ortholog is 100%.
Bootstrap support for F2SNT6 as seed ortholog is 100%.

Group of orthologs #1741. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 T.rubrum:215

Q5KPS5              	100.00%		F2SL94              	100.00%
Bootstrap support for Q5KPS5 as seed ortholog is 100%.
Bootstrap support for F2SL94 as seed ortholog is 100%.

Group of orthologs #1742. Best score 215 bits
Score difference with first non-orthologous sequence - C.neoformans:215 T.rubrum:215

Q5KFT1              	100.00%		F2SY19              	100.00%
Bootstrap support for Q5KFT1 as seed ortholog is 100%.
Bootstrap support for F2SY19 as seed ortholog is 100%.

Group of orthologs #1743. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 T.rubrum:214

Q5KIY4              	100.00%		F2SSL2              	100.00%
Bootstrap support for Q5KIY4 as seed ortholog is 100%.
Bootstrap support for F2SSL2 as seed ortholog is 100%.

Group of orthologs #1744. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 T.rubrum:214

Q5KPF3              	100.00%		F2SNE7              	100.00%
Bootstrap support for Q5KPF3 as seed ortholog is 100%.
Bootstrap support for F2SNE7 as seed ortholog is 100%.

Group of orthologs #1745. Best score 214 bits
Score difference with first non-orthologous sequence - C.neoformans:214 T.rubrum:214

Q5KQ40              	100.00%		F2SV24              	100.00%
Bootstrap support for Q5KQ40 as seed ortholog is 100%.
Bootstrap support for F2SV24 as seed ortholog is 100%.

Group of orthologs #1746. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 T.rubrum:213

P0CM32              	100.00%		F2SCS5              	100.00%
Bootstrap support for P0CM32 as seed ortholog is 100%.
Bootstrap support for F2SCS5 as seed ortholog is 100%.

Group of orthologs #1747. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:90 T.rubrum:120

Q5K8N5              	100.00%		F2SEV6              	100.00%
Bootstrap support for Q5K8N5 as seed ortholog is 95%.
Bootstrap support for F2SEV6 as seed ortholog is 99%.

Group of orthologs #1748. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 T.rubrum:213

Q5KG31              	100.00%		F2SE75              	100.00%
Bootstrap support for Q5KG31 as seed ortholog is 100%.
Bootstrap support for F2SE75 as seed ortholog is 100%.

Group of orthologs #1749. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 T.rubrum:213

Q5KDP6              	100.00%		F2SIC5              	100.00%
Bootstrap support for Q5KDP6 as seed ortholog is 100%.
Bootstrap support for F2SIC5 as seed ortholog is 100%.

Group of orthologs #1750. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 T.rubrum:213

Q5KI93              	100.00%		F2SI23              	100.00%
Bootstrap support for Q5KI93 as seed ortholog is 100%.
Bootstrap support for F2SI23 as seed ortholog is 100%.

Group of orthologs #1751. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 T.rubrum:213

Q5KM08              	100.00%		F2SFD9              	100.00%
Bootstrap support for Q5KM08 as seed ortholog is 100%.
Bootstrap support for F2SFD9 as seed ortholog is 100%.

Group of orthologs #1752. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 T.rubrum:213

Q5KMR4              	100.00%		F2SHM3              	100.00%
Bootstrap support for Q5KMR4 as seed ortholog is 100%.
Bootstrap support for F2SHM3 as seed ortholog is 100%.

Group of orthologs #1753. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 T.rubrum:151

Q5K8B3              	100.00%		F2T0Y6              	100.00%
Bootstrap support for Q5K8B3 as seed ortholog is 100%.
Bootstrap support for F2T0Y6 as seed ortholog is 100%.

Group of orthologs #1754. Best score 213 bits
Score difference with first non-orthologous sequence - C.neoformans:213 T.rubrum:213

Q5KJS1              	100.00%		F2SYN2              	100.00%
Bootstrap support for Q5KJS1 as seed ortholog is 100%.
Bootstrap support for F2SYN2 as seed ortholog is 100%.

Group of orthologs #1755. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 T.rubrum:212

Q5KB20              	100.00%		F2ST50              	100.00%
                    	       		F2SIH9              	35.54%
                    	       		F2SQM4              	34.59%
                    	       		F2SLF1              	21.93%
Bootstrap support for Q5KB20 as seed ortholog is 100%.
Bootstrap support for F2ST50 as seed ortholog is 100%.

Group of orthologs #1756. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:31 T.rubrum:212

Q5KC39              	100.00%		F2SS89              	100.00%
                    	       		F2SFH1              	22.96%
                    	       		F2SD06              	21.00%
Bootstrap support for Q5KC39 as seed ortholog is 90%.
Bootstrap support for F2SS89 as seed ortholog is 100%.

Group of orthologs #1757. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 T.rubrum:212

Q5K8D6              	100.00%		F2SL99              	100.00%
Bootstrap support for Q5K8D6 as seed ortholog is 100%.
Bootstrap support for F2SL99 as seed ortholog is 100%.

Group of orthologs #1758. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 T.rubrum:212

Q5KD44              	100.00%		F2SHB4              	100.00%
Bootstrap support for Q5KD44 as seed ortholog is 100%.
Bootstrap support for F2SHB4 as seed ortholog is 100%.

Group of orthologs #1759. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 T.rubrum:212

P0CO22              	100.00%		F2SPP1              	100.00%
Bootstrap support for P0CO22 as seed ortholog is 100%.
Bootstrap support for F2SPP1 as seed ortholog is 100%.

Group of orthologs #1760. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 T.rubrum:212

Q5KDG7              	100.00%		F2SN14              	100.00%
Bootstrap support for Q5KDG7 as seed ortholog is 100%.
Bootstrap support for F2SN14 as seed ortholog is 100%.

Group of orthologs #1761. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubrum:86

Q5KGN1              	100.00%		F2SMQ7              	100.00%
Bootstrap support for Q5KGN1 as seed ortholog is 99%.
Bootstrap support for F2SMQ7 as seed ortholog is 99%.

Group of orthologs #1762. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 T.rubrum:212

Q5KK73              	100.00%		F2SM12              	100.00%
Bootstrap support for Q5KK73 as seed ortholog is 100%.
Bootstrap support for F2SM12 as seed ortholog is 100%.

Group of orthologs #1763. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 T.rubrum:212

Q5K9N3              	100.00%		F2SYJ5              	100.00%
Bootstrap support for Q5K9N3 as seed ortholog is 100%.
Bootstrap support for F2SYJ5 as seed ortholog is 100%.

Group of orthologs #1764. Best score 212 bits
Score difference with first non-orthologous sequence - C.neoformans:212 T.rubrum:138

Q5KBS3              	100.00%		F2SXG7              	100.00%
Bootstrap support for Q5KBS3 as seed ortholog is 100%.
Bootstrap support for F2SXG7 as seed ortholog is 99%.

Group of orthologs #1765. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 T.rubrum:211

P0CM80              	100.00%		F2SF28              	100.00%
Bootstrap support for P0CM80 as seed ortholog is 100%.
Bootstrap support for F2SF28 as seed ortholog is 100%.

Group of orthologs #1766. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:97 T.rubrum:211

Q5KDH2              	100.00%		F2SEZ0              	100.00%
Bootstrap support for Q5KDH2 as seed ortholog is 99%.
Bootstrap support for F2SEZ0 as seed ortholog is 100%.

Group of orthologs #1767. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 T.rubrum:211

Q5K890              	100.00%		F2SK36              	100.00%
Bootstrap support for Q5K890 as seed ortholog is 100%.
Bootstrap support for F2SK36 as seed ortholog is 100%.

Group of orthologs #1768. Best score 211 bits
Score difference with first non-orthologous sequence - C.neoformans:211 T.rubrum:211

Q5K9R4              	100.00%		F2SWD7              	100.00%
Bootstrap support for Q5K9R4 as seed ortholog is 100%.
Bootstrap support for F2SWD7 as seed ortholog is 100%.

Group of orthologs #1769. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 T.rubrum:210

Q5KE85              	100.00%		F2SNC3              	100.00%
Bootstrap support for Q5KE85 as seed ortholog is 100%.
Bootstrap support for F2SNC3 as seed ortholog is 100%.

Group of orthologs #1770. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 T.rubrum:210

Q5KMT0              	100.00%		F2SL17              	100.00%
Bootstrap support for Q5KMT0 as seed ortholog is 100%.
Bootstrap support for F2SL17 as seed ortholog is 100%.

Group of orthologs #1771. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 T.rubrum:210

Q5KLH8              	100.00%		F2SNY8              	100.00%
Bootstrap support for Q5KLH8 as seed ortholog is 100%.
Bootstrap support for F2SNY8 as seed ortholog is 100%.

Group of orthologs #1772. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 T.rubrum:210

Q5KJB4              	100.00%		F2SV31              	100.00%
Bootstrap support for Q5KJB4 as seed ortholog is 100%.
Bootstrap support for F2SV31 as seed ortholog is 100%.

Group of orthologs #1773. Best score 210 bits
Score difference with first non-orthologous sequence - C.neoformans:210 T.rubrum:210

Q5KFZ1              	100.00%		F2SZZ9              	100.00%
Bootstrap support for Q5KFZ1 as seed ortholog is 100%.
Bootstrap support for F2SZZ9 as seed ortholog is 100%.

Group of orthologs #1774. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 T.rubrum:209

Q5KDP4              	100.00%		F2SJ15              	100.00%
Bootstrap support for Q5KDP4 as seed ortholog is 100%.
Bootstrap support for F2SJ15 as seed ortholog is 100%.

Group of orthologs #1775. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 T.rubrum:209

Q5KEE5              	100.00%		F2SLK9              	100.00%
Bootstrap support for Q5KEE5 as seed ortholog is 100%.
Bootstrap support for F2SLK9 as seed ortholog is 100%.

Group of orthologs #1776. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 T.rubrum:209

Q5KE34              	100.00%		F2SNL6              	100.00%
Bootstrap support for Q5KE34 as seed ortholog is 100%.
Bootstrap support for F2SNL6 as seed ortholog is 100%.

Group of orthologs #1777. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 T.rubrum:209

Q5KG39              	100.00%		F2SNK2              	100.00%
Bootstrap support for Q5KG39 as seed ortholog is 100%.
Bootstrap support for F2SNK2 as seed ortholog is 100%.

Group of orthologs #1778. Best score 209 bits
Score difference with first non-orthologous sequence - C.neoformans:209 T.rubrum:93

Q5KIC8              	100.00%		F2SXE7              	100.00%
Bootstrap support for Q5KIC8 as seed ortholog is 100%.
Bootstrap support for F2SXE7 as seed ortholog is 99%.

Group of orthologs #1779. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubrum:102

Q5KAF3              	100.00%		F2SCV6              	100.00%
Bootstrap support for Q5KAF3 as seed ortholog is 99%.
Bootstrap support for F2SCV6 as seed ortholog is 99%.

Group of orthologs #1780. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 T.rubrum:208

P0CM42              	100.00%		F2SKC7              	100.00%
Bootstrap support for P0CM42 as seed ortholog is 100%.
Bootstrap support for F2SKC7 as seed ortholog is 100%.

Group of orthologs #1781. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 T.rubrum:208

Q5K9Y7              	100.00%		F2SSC8              	100.00%
Bootstrap support for Q5K9Y7 as seed ortholog is 100%.
Bootstrap support for F2SSC8 as seed ortholog is 100%.

Group of orthologs #1782. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 T.rubrum:208

Q5KAD5              	100.00%		F2SY82              	100.00%
Bootstrap support for Q5KAD5 as seed ortholog is 100%.
Bootstrap support for F2SY82 as seed ortholog is 100%.

Group of orthologs #1783. Best score 208 bits
Score difference with first non-orthologous sequence - C.neoformans:208 T.rubrum:208

Q5KGI2              	100.00%		F2T074              	100.00%
Bootstrap support for Q5KGI2 as seed ortholog is 100%.
Bootstrap support for F2T074 as seed ortholog is 100%.

Group of orthologs #1784. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 T.rubrum:207

Q5K8R6              	100.00%		F2SBJ5              	100.00%
Q5KI68              	10.40%		F2SUP0              	9.06%
Q5KHM7              	7.66%		F2SS80              	8.87%
Bootstrap support for Q5K8R6 as seed ortholog is 100%.
Bootstrap support for F2SBJ5 as seed ortholog is 100%.

Group of orthologs #1785. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 T.rubrum:85

Q5KAZ1              	100.00%		F2SFF6              	100.00%
Bootstrap support for Q5KAZ1 as seed ortholog is 100%.
Bootstrap support for F2SFF6 as seed ortholog is 99%.

Group of orthologs #1786. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:5 T.rubrum:207

Q5K9A1              	100.00%		F2SJ54              	100.00%
Bootstrap support for Q5K9A1 as seed ortholog is 46%.
Alternative seed ortholog is Q5KMB5 (5 bits away from this cluster)
Bootstrap support for F2SJ54 as seed ortholog is 100%.

Group of orthologs #1787. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:23 T.rubrum:33

Q5KDD9              	100.00%		F2SI01              	100.00%
Bootstrap support for Q5KDD9 as seed ortholog is 74%.
Alternative seed ortholog is Q5KJY2 (23 bits away from this cluster)
Bootstrap support for F2SI01 as seed ortholog is 81%.

Group of orthologs #1788. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 T.rubrum:207

Q5KKQ1              	100.00%		F2SC78              	100.00%
Bootstrap support for Q5KKQ1 as seed ortholog is 100%.
Bootstrap support for F2SC78 as seed ortholog is 100%.

Group of orthologs #1789. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 T.rubrum:207

Q5KCJ9              	100.00%		F2SKP3              	100.00%
Bootstrap support for Q5KCJ9 as seed ortholog is 100%.
Bootstrap support for F2SKP3 as seed ortholog is 100%.

Group of orthologs #1790. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 T.rubrum:207

Q5KCU1              	100.00%		F2SLW9              	100.00%
Bootstrap support for Q5KCU1 as seed ortholog is 100%.
Bootstrap support for F2SLW9 as seed ortholog is 100%.

Group of orthologs #1791. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubrum:79

Q5KFL8              	100.00%		F2SLX6              	100.00%
Bootstrap support for Q5KFL8 as seed ortholog is 96%.
Bootstrap support for F2SLX6 as seed ortholog is 92%.

Group of orthologs #1792. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 T.rubrum:207

Q5KM24              	100.00%		F2SIJ0              	100.00%
Bootstrap support for Q5KM24 as seed ortholog is 100%.
Bootstrap support for F2SIJ0 as seed ortholog is 100%.

Group of orthologs #1793. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:78 T.rubrum:93

Q5KGW6              	100.00%		F2SU09              	100.00%
Bootstrap support for Q5KGW6 as seed ortholog is 97%.
Bootstrap support for F2SU09 as seed ortholog is 97%.

Group of orthologs #1794. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 T.rubrum:207

Q5KE38              	100.00%		F2SXB2              	100.00%
Bootstrap support for Q5KE38 as seed ortholog is 100%.
Bootstrap support for F2SXB2 as seed ortholog is 100%.

Group of orthologs #1795. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 T.rubrum:207

Q5KMA3              	100.00%		F2SRG3              	100.00%
Bootstrap support for Q5KMA3 as seed ortholog is 100%.
Bootstrap support for F2SRG3 as seed ortholog is 100%.

Group of orthologs #1796. Best score 207 bits
Score difference with first non-orthologous sequence - C.neoformans:207 T.rubrum:207

Q5KN34              	100.00%		F2SXM0              	100.00%
Bootstrap support for Q5KN34 as seed ortholog is 100%.
Bootstrap support for F2SXM0 as seed ortholog is 100%.

Group of orthologs #1797. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubrum:206

Q5KN08              	100.00%		F2SHD1              	100.00%
Bootstrap support for Q5KN08 as seed ortholog is 97%.
Bootstrap support for F2SHD1 as seed ortholog is 100%.

Group of orthologs #1798. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 T.rubrum:206

Q5KMP8              	100.00%		F2SK99              	100.00%
Bootstrap support for Q5KMP8 as seed ortholog is 100%.
Bootstrap support for F2SK99 as seed ortholog is 100%.

Group of orthologs #1799. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 T.rubrum:206

Q5K726              	100.00%		F2T0R1              	100.00%
Bootstrap support for Q5K726 as seed ortholog is 100%.
Bootstrap support for F2T0R1 as seed ortholog is 100%.

Group of orthologs #1800. Best score 206 bits
Score difference with first non-orthologous sequence - C.neoformans:206 T.rubrum:206

Q5KQ33              	100.00%		F2SNC4              	100.00%
Bootstrap support for Q5KQ33 as seed ortholog is 100%.
Bootstrap support for F2SNC4 as seed ortholog is 100%.

Group of orthologs #1801. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 T.rubrum:205

Q5KIG4              	100.00%		F2SEJ4              	100.00%
Bootstrap support for Q5KIG4 as seed ortholog is 100%.
Bootstrap support for F2SEJ4 as seed ortholog is 100%.

Group of orthologs #1802. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 T.rubrum:205

Q5KEX8              	100.00%		F2SIW9              	100.00%
Bootstrap support for Q5KEX8 as seed ortholog is 100%.
Bootstrap support for F2SIW9 as seed ortholog is 100%.

Group of orthologs #1803. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 T.rubrum:205

Q5KGR3              	100.00%		F2SK49              	100.00%
Bootstrap support for Q5KGR3 as seed ortholog is 100%.
Bootstrap support for F2SK49 as seed ortholog is 100%.

Group of orthologs #1804. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 T.rubrum:205

P0CN14              	100.00%		F2SV28              	100.00%
Bootstrap support for P0CN14 as seed ortholog is 100%.
Bootstrap support for F2SV28 as seed ortholog is 100%.

Group of orthologs #1805. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 T.rubrum:205

Q5KEC3              	100.00%		F2SN81              	100.00%
Bootstrap support for Q5KEC3 as seed ortholog is 100%.
Bootstrap support for F2SN81 as seed ortholog is 100%.

Group of orthologs #1806. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 T.rubrum:205

P0CS08              	100.00%		F2T1A3              	100.00%
Bootstrap support for P0CS08 as seed ortholog is 100%.
Bootstrap support for F2T1A3 as seed ortholog is 100%.

Group of orthologs #1807. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 T.rubrum:205

Q5KAJ9              	100.00%		F2SY40              	100.00%
Bootstrap support for Q5KAJ9 as seed ortholog is 100%.
Bootstrap support for F2SY40 as seed ortholog is 100%.

Group of orthologs #1808. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 T.rubrum:205

Q5KA56              	100.00%		F2T050              	100.00%
Bootstrap support for Q5KA56 as seed ortholog is 100%.
Bootstrap support for F2T050 as seed ortholog is 100%.

Group of orthologs #1809. Best score 205 bits
Score difference with first non-orthologous sequence - C.neoformans:205 T.rubrum:205

Q5KJJ4              	100.00%		F2SYV6              	100.00%
Bootstrap support for Q5KJJ4 as seed ortholog is 100%.
Bootstrap support for F2SYV6 as seed ortholog is 100%.

Group of orthologs #1810. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:23 T.rubrum:31

Q5KP42              	100.00%		F2SXW0              	100.00%
                    	       		F2SJK9              	19.43%
                    	       		F2SQ51              	16.18%
                    	       		F2SGE3              	7.56%
                    	       		F2SSS4              	7.35%
Bootstrap support for Q5KP42 as seed ortholog is 70%.
Alternative seed ortholog is Q5KB42 (23 bits away from this cluster)
Bootstrap support for F2SXW0 as seed ortholog is 77%.

Group of orthologs #1811. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 T.rubrum:83

Q5KAU6              	100.00%		F2SL74              	100.00%
Bootstrap support for Q5KAU6 as seed ortholog is 100%.
Bootstrap support for F2SL74 as seed ortholog is 80%.

Group of orthologs #1812. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 T.rubrum:204

Q5KBT5              	100.00%		F2SKE2              	100.00%
Bootstrap support for Q5KBT5 as seed ortholog is 100%.
Bootstrap support for F2SKE2 as seed ortholog is 100%.

Group of orthologs #1813. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:56 T.rubrum:129

Q5KCQ7              	100.00%		F2SKB8              	100.00%
Bootstrap support for Q5KCQ7 as seed ortholog is 98%.
Bootstrap support for F2SKB8 as seed ortholog is 99%.

Group of orthologs #1814. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 T.rubrum:204

Q5KE21              	100.00%		F2SJQ1              	100.00%
Bootstrap support for Q5KE21 as seed ortholog is 100%.
Bootstrap support for F2SJQ1 as seed ortholog is 100%.

Group of orthologs #1815. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 T.rubrum:204

Q5K888              	100.00%		F2SQ20              	100.00%
Bootstrap support for Q5K888 as seed ortholog is 100%.
Bootstrap support for F2SQ20 as seed ortholog is 100%.

Group of orthologs #1816. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 T.rubrum:204

Q5K741              	100.00%		F2ST73              	100.00%
Bootstrap support for Q5K741 as seed ortholog is 100%.
Bootstrap support for F2ST73 as seed ortholog is 100%.

Group of orthologs #1817. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 T.rubrum:204

Q5KP77              	100.00%		F2SG65              	100.00%
Bootstrap support for Q5KP77 as seed ortholog is 100%.
Bootstrap support for F2SG65 as seed ortholog is 100%.

Group of orthologs #1818. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 T.rubrum:204

Q5K762              	100.00%		F2SX67              	100.00%
Bootstrap support for Q5K762 as seed ortholog is 100%.
Bootstrap support for F2SX67 as seed ortholog is 100%.

Group of orthologs #1819. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 T.rubrum:144

Q5KIK8              	100.00%		F2SMB1              	100.00%
Bootstrap support for Q5KIK8 as seed ortholog is 100%.
Bootstrap support for F2SMB1 as seed ortholog is 100%.

Group of orthologs #1820. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 T.rubrum:146

Q5KNY1              	100.00%		F2SPH3              	100.00%
Bootstrap support for Q5KNY1 as seed ortholog is 100%.
Bootstrap support for F2SPH3 as seed ortholog is 99%.

Group of orthologs #1821. Best score 204 bits
Score difference with first non-orthologous sequence - C.neoformans:204 T.rubrum:204

Q5KLS9              	100.00%		F2STV4              	100.00%
Bootstrap support for Q5KLS9 as seed ortholog is 100%.
Bootstrap support for F2STV4 as seed ortholog is 100%.

Group of orthologs #1822. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 T.rubrum:203

Q5K710              	100.00%		F2SHY1              	100.00%
Bootstrap support for Q5K710 as seed ortholog is 100%.
Bootstrap support for F2SHY1 as seed ortholog is 100%.

Group of orthologs #1823. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 T.rubrum:203

Q5K9F1              	100.00%		F2SFQ6              	100.00%
Bootstrap support for Q5K9F1 as seed ortholog is 100%.
Bootstrap support for F2SFQ6 as seed ortholog is 100%.

Group of orthologs #1824. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 T.rubrum:203

Q5KG66              	100.00%		F2SGR1              	100.00%
Bootstrap support for Q5KG66 as seed ortholog is 100%.
Bootstrap support for F2SGR1 as seed ortholog is 100%.

Group of orthologs #1825. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 T.rubrum:203

Q5KB12              	100.00%		F2SN27              	100.00%
Bootstrap support for Q5KB12 as seed ortholog is 100%.
Bootstrap support for F2SN27 as seed ortholog is 100%.

Group of orthologs #1826. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubrum:126

Q5KDF7              	100.00%		F2STW3              	100.00%
Bootstrap support for Q5KDF7 as seed ortholog is 99%.
Bootstrap support for F2STW3 as seed ortholog is 99%.

Group of orthologs #1827. Best score 203 bits
Score difference with first non-orthologous sequence - C.neoformans:203 T.rubrum:203

Q5KFQ2              	100.00%		F2STC5              	100.00%
Bootstrap support for Q5KFQ2 as seed ortholog is 100%.
Bootstrap support for F2STC5 as seed ortholog is 100%.

Group of orthologs #1828. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 T.rubrum:202

Q5KBW8              	100.00%		F2SBX4              	100.00%
Bootstrap support for Q5KBW8 as seed ortholog is 100%.
Bootstrap support for F2SBX4 as seed ortholog is 100%.

Group of orthologs #1829. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubrum:104

Q5KJ95              	100.00%		F2SE05              	100.00%
Bootstrap support for Q5KJ95 as seed ortholog is 84%.
Bootstrap support for F2SE05 as seed ortholog is 88%.

Group of orthologs #1830. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 T.rubrum:202

Q5K9C8              	100.00%		F2SR40              	100.00%
Bootstrap support for Q5K9C8 as seed ortholog is 100%.
Bootstrap support for F2SR40 as seed ortholog is 100%.

Group of orthologs #1831. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 T.rubrum:202

Q5KG47              	100.00%		F2SLJ3              	100.00%
Bootstrap support for Q5KG47 as seed ortholog is 100%.
Bootstrap support for F2SLJ3 as seed ortholog is 100%.

Group of orthologs #1832. Best score 202 bits
Score difference with first non-orthologous sequence - C.neoformans:202 T.rubrum:202

Q5KEW0              	100.00%		F2SYD6              	100.00%
Bootstrap support for Q5KEW0 as seed ortholog is 100%.
Bootstrap support for F2SYD6 as seed ortholog is 100%.

Group of orthologs #1833. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 T.rubrum:201

Q5KF67              	100.00%		F2SI02              	100.00%
Bootstrap support for Q5KF67 as seed ortholog is 100%.
Bootstrap support for F2SI02 as seed ortholog is 100%.

Group of orthologs #1834. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 T.rubrum:201

Q5KMP1              	100.00%		F2SFL1              	100.00%
Bootstrap support for Q5KMP1 as seed ortholog is 100%.
Bootstrap support for F2SFL1 as seed ortholog is 100%.

Group of orthologs #1835. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 T.rubrum:201

Q5KMA0              	100.00%		F2SHM5              	100.00%
Bootstrap support for Q5KMA0 as seed ortholog is 100%.
Bootstrap support for F2SHM5 as seed ortholog is 100%.

Group of orthologs #1836. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 T.rubrum:201

Q5KLQ8              	100.00%		F2SJT7              	100.00%
Bootstrap support for Q5KLQ8 as seed ortholog is 100%.
Bootstrap support for F2SJT7 as seed ortholog is 100%.

Group of orthologs #1837. Best score 201 bits
Score difference with first non-orthologous sequence - C.neoformans:201 T.rubrum:201

Q5KND0              	100.00%		F2SRK1              	100.00%
Bootstrap support for Q5KND0 as seed ortholog is 100%.
Bootstrap support for F2SRK1 as seed ortholog is 100%.

Group of orthologs #1838. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 T.rubrum:200

P0CO64              	100.00%		F2SDE7              	100.00%
Bootstrap support for P0CO64 as seed ortholog is 100%.
Bootstrap support for F2SDE7 as seed ortholog is 100%.

Group of orthologs #1839. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 T.rubrum:200

P0CR44              	100.00%		F2SNR7              	100.00%
Bootstrap support for P0CR44 as seed ortholog is 100%.
Bootstrap support for F2SNR7 as seed ortholog is 100%.

Group of orthologs #1840. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 T.rubrum:200

Q5KJB6              	100.00%		F2SEQ0              	100.00%
Bootstrap support for Q5KJB6 as seed ortholog is 100%.
Bootstrap support for F2SEQ0 as seed ortholog is 100%.

Group of orthologs #1841. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:84 T.rubrum:200

Q5KG52              	100.00%		F2SML0              	100.00%
Bootstrap support for Q5KG52 as seed ortholog is 90%.
Bootstrap support for F2SML0 as seed ortholog is 100%.

Group of orthologs #1842. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 T.rubrum:200

Q5KNF9              	100.00%		F2SG56              	100.00%
Bootstrap support for Q5KNF9 as seed ortholog is 100%.
Bootstrap support for F2SG56 as seed ortholog is 100%.

Group of orthologs #1843. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 T.rubrum:200

Q5K9U0              	100.00%		F2SVW6              	100.00%
Bootstrap support for Q5K9U0 as seed ortholog is 100%.
Bootstrap support for F2SVW6 as seed ortholog is 100%.

Group of orthologs #1844. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 T.rubrum:145

Q5KKX5              	100.00%		F2SMA2              	100.00%
Bootstrap support for Q5KKX5 as seed ortholog is 100%.
Bootstrap support for F2SMA2 as seed ortholog is 100%.

Group of orthologs #1845. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 T.rubrum:200

Q5K979              	100.00%		F2SZX0              	100.00%
Bootstrap support for Q5K979 as seed ortholog is 100%.
Bootstrap support for F2SZX0 as seed ortholog is 100%.

Group of orthologs #1846. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 T.rubrum:200

Q5KHX0              	100.00%		F2SU94              	100.00%
Bootstrap support for Q5KHX0 as seed ortholog is 100%.
Bootstrap support for F2SU94 as seed ortholog is 100%.

Group of orthologs #1847. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 T.rubrum:71

Q5KNP5              	100.00%		F2SUR1              	100.00%
Bootstrap support for Q5KNP5 as seed ortholog is 100%.
Bootstrap support for F2SUR1 as seed ortholog is 96%.

Group of orthologs #1848. Best score 200 bits
Score difference with first non-orthologous sequence - C.neoformans:200 T.rubrum:200

Q5KKD1              	100.00%		F2SZH8              	100.00%
Bootstrap support for Q5KKD1 as seed ortholog is 100%.
Bootstrap support for F2SZH8 as seed ortholog is 100%.

Group of orthologs #1849. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 T.rubrum:45

Q5KE36              	100.00%		F2SW67              	100.00%
Q5KE37              	34.93%		
Bootstrap support for Q5KE36 as seed ortholog is 100%.
Bootstrap support for F2SW67 as seed ortholog is 94%.

Group of orthologs #1850. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 T.rubrum:199

Q5KAV8              	100.00%		F2SJS2              	100.00%
Bootstrap support for Q5KAV8 as seed ortholog is 100%.
Bootstrap support for F2SJS2 as seed ortholog is 100%.

Group of orthologs #1851. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 T.rubrum:199

Q5KDK4              	100.00%		F2SIA3              	100.00%
Bootstrap support for Q5KDK4 as seed ortholog is 100%.
Bootstrap support for F2SIA3 as seed ortholog is 100%.

Group of orthologs #1852. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 T.rubrum:199

Q5KHC0              	100.00%		F2SEZ2              	100.00%
Bootstrap support for Q5KHC0 as seed ortholog is 100%.
Bootstrap support for F2SEZ2 as seed ortholog is 100%.

Group of orthologs #1853. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 T.rubrum:199

Q5KHT9              	100.00%		F2SF90              	100.00%
Bootstrap support for Q5KHT9 as seed ortholog is 100%.
Bootstrap support for F2SF90 as seed ortholog is 100%.

Group of orthologs #1854. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 T.rubrum:199

Q5K8Y6              	100.00%		F2SNE1              	100.00%
Bootstrap support for Q5K8Y6 as seed ortholog is 100%.
Bootstrap support for F2SNE1 as seed ortholog is 100%.

Group of orthologs #1855. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 T.rubrum:199

Q5K8K8              	100.00%		F2SSW4              	100.00%
Bootstrap support for Q5K8K8 as seed ortholog is 100%.
Bootstrap support for F2SSW4 as seed ortholog is 100%.

Group of orthologs #1856. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 T.rubrum:199

Q5K8S9              	100.00%		F2STE1              	100.00%
Bootstrap support for Q5K8S9 as seed ortholog is 100%.
Bootstrap support for F2STE1 as seed ortholog is 100%.

Group of orthologs #1857. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 T.rubrum:199

Q5KH86              	100.00%		F2SS56              	100.00%
Bootstrap support for Q5KH86 as seed ortholog is 100%.
Bootstrap support for F2SS56 as seed ortholog is 100%.

Group of orthologs #1858. Best score 199 bits
Score difference with first non-orthologous sequence - C.neoformans:199 T.rubrum:199

Q5KIZ8              	100.00%		F2SZT9              	100.00%
Bootstrap support for Q5KIZ8 as seed ortholog is 100%.
Bootstrap support for F2SZT9 as seed ortholog is 100%.

Group of orthologs #1859. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubrum:106

Q5K9X0              	100.00%		F2SM29              	100.00%
Bootstrap support for Q5K9X0 as seed ortholog is 97%.
Bootstrap support for F2SM29 as seed ortholog is 98%.

Group of orthologs #1860. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubrum:156

Q5KGB5              	100.00%		F2SKR8              	100.00%
Bootstrap support for Q5KGB5 as seed ortholog is 100%.
Bootstrap support for F2SKR8 as seed ortholog is 100%.

Group of orthologs #1861. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:30 T.rubrum:71

Q5KCN9              	100.00%		F2SU06              	100.00%
Bootstrap support for Q5KCN9 as seed ortholog is 79%.
Bootstrap support for F2SU06 as seed ortholog is 96%.

Group of orthologs #1862. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 T.rubrum:198

Q5KD76              	100.00%		F2SVM4              	100.00%
Bootstrap support for Q5KD76 as seed ortholog is 100%.
Bootstrap support for F2SVM4 as seed ortholog is 100%.

Group of orthologs #1863. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 T.rubrum:198

Q5KQ86              	100.00%		F2SYG0              	100.00%
Bootstrap support for Q5KQ86 as seed ortholog is 100%.
Bootstrap support for F2SYG0 as seed ortholog is 100%.

Group of orthologs #1864. Best score 198 bits
Score difference with first non-orthologous sequence - C.neoformans:198 T.rubrum:198

Q5KPF9              	100.00%		F2T0Y3              	100.00%
Bootstrap support for Q5KPF9 as seed ortholog is 100%.
Bootstrap support for F2T0Y3 as seed ortholog is 100%.

Group of orthologs #1865. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 T.rubrum:197

Q5KEL7              	100.00%		F2SUV1              	100.00%
                    	       		F2SL56              	9.61%
Bootstrap support for Q5KEL7 as seed ortholog is 100%.
Bootstrap support for F2SUV1 as seed ortholog is 100%.

Group of orthologs #1866. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:4 T.rubrum:197

Q5KQ71              	100.00%		F2SZK1              	100.00%
Q5K9T3              	16.81%		
Bootstrap support for Q5KQ71 as seed ortholog is 44%.
Alternative seed ortholog is Q5KKJ9 (4 bits away from this cluster)
Bootstrap support for F2SZK1 as seed ortholog is 100%.

Group of orthologs #1867. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 T.rubrum:197

Q5KAX8              	100.00%		F2SME8              	100.00%
Bootstrap support for Q5KAX8 as seed ortholog is 100%.
Bootstrap support for F2SME8 as seed ortholog is 100%.

Group of orthologs #1868. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 T.rubrum:197

P0CO50              	100.00%		F2STC0              	100.00%
Bootstrap support for P0CO50 as seed ortholog is 100%.
Bootstrap support for F2STC0 as seed ortholog is 100%.

Group of orthologs #1869. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 T.rubrum:197

Q5KNT0              	100.00%		F2SE12              	100.00%
Bootstrap support for Q5KNT0 as seed ortholog is 100%.
Bootstrap support for F2SE12 as seed ortholog is 100%.

Group of orthologs #1870. Best score 197 bits
Score difference with first non-orthologous sequence - C.neoformans:197 T.rubrum:197

Q5KLP3              	100.00%		F2SLC1              	100.00%
Bootstrap support for Q5KLP3 as seed ortholog is 100%.
Bootstrap support for F2SLC1 as seed ortholog is 100%.

Group of orthologs #1871. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 T.rubrum:196

Q5K813              	100.00%		F2SKY2              	100.00%
                    	       		F2SKT7              	8.48%
Bootstrap support for Q5K813 as seed ortholog is 100%.
Bootstrap support for F2SKY2 as seed ortholog is 100%.

Group of orthologs #1872. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 T.rubrum:130

Q5K766              	100.00%		F2SFL3              	100.00%
Bootstrap support for Q5K766 as seed ortholog is 100%.
Bootstrap support for F2SFL3 as seed ortholog is 99%.

Group of orthologs #1873. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 T.rubrum:196

Q5KBI4              	100.00%		F2SCH6              	100.00%
Bootstrap support for Q5KBI4 as seed ortholog is 100%.
Bootstrap support for F2SCH6 as seed ortholog is 100%.

Group of orthologs #1874. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 T.rubrum:196

P0CN52              	100.00%		F2SJE7              	100.00%
Bootstrap support for P0CN52 as seed ortholog is 100%.
Bootstrap support for F2SJE7 as seed ortholog is 100%.

Group of orthologs #1875. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 T.rubrum:196

Q5K905              	100.00%		F2SK67              	100.00%
Bootstrap support for Q5K905 as seed ortholog is 100%.
Bootstrap support for F2SK67 as seed ortholog is 100%.

Group of orthologs #1876. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 T.rubrum:196

Q5KLK0              	100.00%		F2SDC9              	100.00%
Bootstrap support for Q5KLK0 as seed ortholog is 100%.
Bootstrap support for F2SDC9 as seed ortholog is 100%.

Group of orthologs #1877. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 T.rubrum:196

Q5K760              	100.00%		F2SSH1              	100.00%
Bootstrap support for Q5K760 as seed ortholog is 100%.
Bootstrap support for F2SSH1 as seed ortholog is 100%.

Group of orthologs #1878. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 T.rubrum:196

Q5KDW7              	100.00%		F2SQN4              	100.00%
Bootstrap support for Q5KDW7 as seed ortholog is 100%.
Bootstrap support for F2SQN4 as seed ortholog is 100%.

Group of orthologs #1879. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 T.rubrum:196

Q5KFJ2              	100.00%		F2SSP7              	100.00%
Bootstrap support for Q5KFJ2 as seed ortholog is 100%.
Bootstrap support for F2SSP7 as seed ortholog is 100%.

Group of orthologs #1880. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:66 T.rubrum:100

Q5K8F1              	100.00%		F2T0C4              	100.00%
Bootstrap support for Q5K8F1 as seed ortholog is 96%.
Bootstrap support for F2T0C4 as seed ortholog is 99%.

Group of orthologs #1881. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:3 T.rubrum:114

Q5KHG8              	100.00%		F2SWT1              	100.00%
Bootstrap support for Q5KHG8 as seed ortholog is 66%.
Alternative seed ortholog is Q5KN17 (3 bits away from this cluster)
Bootstrap support for F2SWT1 as seed ortholog is 99%.

Group of orthologs #1882. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:196 T.rubrum:196

Q5KMR2              	100.00%		F2SYG8              	100.00%
Bootstrap support for Q5KMR2 as seed ortholog is 100%.
Bootstrap support for F2SYG8 as seed ortholog is 100%.

Group of orthologs #1883. Best score 196 bits
Score difference with first non-orthologous sequence - C.neoformans:44 T.rubrum:196

Q5KKG2              	100.00%		F2T151              	100.00%
Bootstrap support for Q5KKG2 as seed ortholog is 87%.
Bootstrap support for F2T151 as seed ortholog is 100%.

Group of orthologs #1884. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 T.rubrum:195

Q5KLR3              	100.00%		F2SW75              	100.00%
Q5KLS4              	23.27%		
Bootstrap support for Q5KLR3 as seed ortholog is 100%.
Bootstrap support for F2SW75 as seed ortholog is 100%.

Group of orthologs #1885. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 T.rubrum:195

P0CQ50              	100.00%		F2SD38              	100.00%
Bootstrap support for P0CQ50 as seed ortholog is 100%.
Bootstrap support for F2SD38 as seed ortholog is 100%.

Group of orthologs #1886. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 T.rubrum:195

Q5K9X9              	100.00%		F2SN97              	100.00%
Bootstrap support for Q5K9X9 as seed ortholog is 100%.
Bootstrap support for F2SN97 as seed ortholog is 100%.

Group of orthologs #1887. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 T.rubrum:195

Q5KLB0              	100.00%		F2SET3              	100.00%
Bootstrap support for Q5KLB0 as seed ortholog is 100%.
Bootstrap support for F2SET3 as seed ortholog is 100%.

Group of orthologs #1888. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 T.rubrum:195

Q5K959              	100.00%		F2SWA5              	100.00%
Bootstrap support for Q5K959 as seed ortholog is 100%.
Bootstrap support for F2SWA5 as seed ortholog is 100%.

Group of orthologs #1889. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 T.rubrum:195

Q5KEZ8              	100.00%		F2SRT6              	100.00%
Bootstrap support for Q5KEZ8 as seed ortholog is 100%.
Bootstrap support for F2SRT6 as seed ortholog is 100%.

Group of orthologs #1890. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubrum:195

Q5KNU9              	100.00%		F2SNN5              	100.00%
Bootstrap support for Q5KNU9 as seed ortholog is 85%.
Bootstrap support for F2SNN5 as seed ortholog is 100%.

Group of orthologs #1891. Best score 195 bits
Score difference with first non-orthologous sequence - C.neoformans:195 T.rubrum:195

Q5KJ57              	100.00%		F2SVF8              	100.00%
Bootstrap support for Q5KJ57 as seed ortholog is 100%.
Bootstrap support for F2SVF8 as seed ortholog is 100%.

Group of orthologs #1892. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 T.rubrum:8

Q5KN56              	100.00%		F2SLM0              	100.00%
Q5K6U5              	8.66%		
Bootstrap support for Q5KN56 as seed ortholog is 100%.
Bootstrap support for F2SLM0 as seed ortholog is 60%.
Alternative seed ortholog is F2SW57 (8 bits away from this cluster)

Group of orthologs #1893. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:40 T.rubrum:108

Q5KDH5              	100.00%		F2SCU6              	100.00%
Bootstrap support for Q5KDH5 as seed ortholog is 85%.
Bootstrap support for F2SCU6 as seed ortholog is 99%.

Group of orthologs #1894. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 T.rubrum:194

Q5K8H3              	100.00%		F2SPH5              	100.00%
Bootstrap support for Q5K8H3 as seed ortholog is 100%.
Bootstrap support for F2SPH5 as seed ortholog is 100%.

Group of orthologs #1895. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:12 T.rubrum:194

Q5K9K0              	100.00%		F2SSQ2              	100.00%
Bootstrap support for Q5K9K0 as seed ortholog is 59%.
Alternative seed ortholog is Q5KJS3 (12 bits away from this cluster)
Bootstrap support for F2SSQ2 as seed ortholog is 100%.

Group of orthologs #1896. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 T.rubrum:194

Q5KBS2              	100.00%		F2SRI8              	100.00%
Bootstrap support for Q5KBS2 as seed ortholog is 100%.
Bootstrap support for F2SRI8 as seed ortholog is 100%.

Group of orthologs #1897. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 T.rubrum:194

Q5K8I0              	100.00%		F2SXW3              	100.00%
Bootstrap support for Q5K8I0 as seed ortholog is 100%.
Bootstrap support for F2SXW3 as seed ortholog is 100%.

Group of orthologs #1898. Best score 194 bits
Score difference with first non-orthologous sequence - C.neoformans:194 T.rubrum:194

Q5KKJ2              	100.00%		F2SMP1              	100.00%
Bootstrap support for Q5KKJ2 as seed ortholog is 100%.
Bootstrap support for F2SMP1 as seed ortholog is 100%.

Group of orthologs #1899. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 T.rubrum:193

Q5K9B4              	100.00%		F2SK56              	100.00%
Bootstrap support for Q5K9B4 as seed ortholog is 100%.
Bootstrap support for F2SK56 as seed ortholog is 100%.

Group of orthologs #1900. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:119 T.rubrum:99

Q5KAK0              	100.00%		F2SKI1              	100.00%
Bootstrap support for Q5KAK0 as seed ortholog is 99%.
Bootstrap support for F2SKI1 as seed ortholog is 99%.

Group of orthologs #1901. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 T.rubrum:193

P0CR50              	100.00%		F2SSH8              	100.00%
Bootstrap support for P0CR50 as seed ortholog is 100%.
Bootstrap support for F2SSH8 as seed ortholog is 100%.

Group of orthologs #1902. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 T.rubrum:193

Q5K889              	100.00%		F2SVA1              	100.00%
Bootstrap support for Q5K889 as seed ortholog is 100%.
Bootstrap support for F2SVA1 as seed ortholog is 100%.

Group of orthologs #1903. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:88 T.rubrum:193

Q5KAC3              	100.00%		F2SUM9              	100.00%
Bootstrap support for Q5KAC3 as seed ortholog is 95%.
Bootstrap support for F2SUM9 as seed ortholog is 100%.

Group of orthologs #1904. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 T.rubrum:60

Q5KHZ1              	100.00%		F2SP13              	100.00%
Bootstrap support for Q5KHZ1 as seed ortholog is 100%.
Bootstrap support for F2SP13 as seed ortholog is 98%.

Group of orthologs #1905. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 T.rubrum:193

Q5KL89              	100.00%		F2SND9              	100.00%
Bootstrap support for Q5KL89 as seed ortholog is 100%.
Bootstrap support for F2SND9 as seed ortholog is 100%.

Group of orthologs #1906. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 T.rubrum:193

Q5KLE1              	100.00%		F2SP05              	100.00%
Bootstrap support for Q5KLE1 as seed ortholog is 100%.
Bootstrap support for F2SP05 as seed ortholog is 100%.

Group of orthologs #1907. Best score 193 bits
Score difference with first non-orthologous sequence - C.neoformans:193 T.rubrum:193

Q5KNH9              	100.00%		F2SQY9              	100.00%
Bootstrap support for Q5KNH9 as seed ortholog is 100%.
Bootstrap support for F2SQY9 as seed ortholog is 100%.

Group of orthologs #1908. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 T.rubrum:192

Q5KBK0              	100.00%		F2SE79              	100.00%
Bootstrap support for Q5KBK0 as seed ortholog is 100%.
Bootstrap support for F2SE79 as seed ortholog is 100%.

Group of orthologs #1909. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 T.rubrum:192

P0CQ64              	100.00%		F2SPE4              	100.00%
Bootstrap support for P0CQ64 as seed ortholog is 100%.
Bootstrap support for F2SPE4 as seed ortholog is 100%.

Group of orthologs #1910. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 T.rubrum:192

Q5KF86              	100.00%		F2SHE5              	100.00%
Bootstrap support for Q5KF86 as seed ortholog is 100%.
Bootstrap support for F2SHE5 as seed ortholog is 100%.

Group of orthologs #1911. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 T.rubrum:192

Q5KB73              	100.00%		F2SYK8              	100.00%
Bootstrap support for Q5KB73 as seed ortholog is 100%.
Bootstrap support for F2SYK8 as seed ortholog is 100%.

Group of orthologs #1912. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 T.rubrum:192

Q5KKC1              	100.00%		F2SS97              	100.00%
Bootstrap support for Q5KKC1 as seed ortholog is 100%.
Bootstrap support for F2SS97 as seed ortholog is 100%.

Group of orthologs #1913. Best score 192 bits
Score difference with first non-orthologous sequence - C.neoformans:192 T.rubrum:192

Q5KP56              	100.00%		F2SXT0              	100.00%
Bootstrap support for Q5KP56 as seed ortholog is 100%.
Bootstrap support for F2SXT0 as seed ortholog is 100%.

Group of orthologs #1914. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:37 T.rubrum:191

Q5KP14              	100.00%		F2SZ25              	100.00%
Q5KNE4              	5.60%		
Bootstrap support for Q5KP14 as seed ortholog is 78%.
Bootstrap support for F2SZ25 as seed ortholog is 100%.

Group of orthologs #1915. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 T.rubrum:191

Q5K7Y8              	100.00%		F2SCL7              	100.00%
Bootstrap support for Q5K7Y8 as seed ortholog is 100%.
Bootstrap support for F2SCL7 as seed ortholog is 100%.

Group of orthologs #1916. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:38 T.rubrum:4

Q5KHL8              	100.00%		F2SBU3              	100.00%
Bootstrap support for Q5KHL8 as seed ortholog is 76%.
Bootstrap support for F2SBU3 as seed ortholog is 41%.
Alternative seed ortholog is F2SFF7 (4 bits away from this cluster)

Group of orthologs #1917. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 T.rubrum:191

Q5KCQ4              	100.00%		F2SIE6              	100.00%
Bootstrap support for Q5KCQ4 as seed ortholog is 100%.
Bootstrap support for F2SIE6 as seed ortholog is 100%.

Group of orthologs #1918. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 T.rubrum:191

Q5KKC0              	100.00%		F2SJ58              	100.00%
Bootstrap support for Q5KKC0 as seed ortholog is 100%.
Bootstrap support for F2SJ58 as seed ortholog is 100%.

Group of orthologs #1919. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 T.rubrum:191

Q5KLL5              	100.00%		F2SL23              	100.00%
Bootstrap support for Q5KLL5 as seed ortholog is 100%.
Bootstrap support for F2SL23 as seed ortholog is 100%.

Group of orthologs #1920. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 T.rubrum:191

Q5KPE9              	100.00%		F2SJ22              	100.00%
Bootstrap support for Q5KPE9 as seed ortholog is 100%.
Bootstrap support for F2SJ22 as seed ortholog is 100%.

Group of orthologs #1921. Best score 191 bits
Score difference with first non-orthologous sequence - C.neoformans:191 T.rubrum:191

Q5KMG9              	100.00%		F2SRM9              	100.00%
Bootstrap support for Q5KMG9 as seed ortholog is 100%.
Bootstrap support for F2SRM9 as seed ortholog is 100%.

Group of orthologs #1922. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 T.rubrum:190

Q5KQ44              	100.00%		F2SLU9              	100.00%
Q5KPV8              	46.54%		
Bootstrap support for Q5KQ44 as seed ortholog is 100%.
Bootstrap support for F2SLU9 as seed ortholog is 100%.

Group of orthologs #1923. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 T.rubrum:190

P0CQ26              	100.00%		F2SCU0              	100.00%
Bootstrap support for P0CQ26 as seed ortholog is 100%.
Bootstrap support for F2SCU0 as seed ortholog is 100%.

Group of orthologs #1924. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 T.rubrum:190

P0CS56              	100.00%		F2SER9              	100.00%
Bootstrap support for P0CS56 as seed ortholog is 100%.
Bootstrap support for F2SER9 as seed ortholog is 100%.

Group of orthologs #1925. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 T.rubrum:190

Q5K7J1              	100.00%		F2SSM8              	100.00%
Bootstrap support for Q5K7J1 as seed ortholog is 100%.
Bootstrap support for F2SSM8 as seed ortholog is 100%.

Group of orthologs #1926. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 T.rubrum:190

Q5KEQ0              	100.00%		F2SN18              	100.00%
Bootstrap support for Q5KEQ0 as seed ortholog is 100%.
Bootstrap support for F2SN18 as seed ortholog is 100%.

Group of orthologs #1927. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 T.rubrum:190

Q5K970              	100.00%		F2SYG6              	100.00%
Bootstrap support for Q5K970 as seed ortholog is 100%.
Bootstrap support for F2SYG6 as seed ortholog is 100%.

Group of orthologs #1928. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 T.rubrum:190

Q5KH61              	100.00%		F2STP3              	100.00%
Bootstrap support for Q5KH61 as seed ortholog is 100%.
Bootstrap support for F2STP3 as seed ortholog is 100%.

Group of orthologs #1929. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:190 T.rubrum:190

Q5KKZ0              	100.00%		F2SSB1              	100.00%
Bootstrap support for Q5KKZ0 as seed ortholog is 100%.
Bootstrap support for F2SSB1 as seed ortholog is 100%.

Group of orthologs #1930. Best score 190 bits
Score difference with first non-orthologous sequence - C.neoformans:37 T.rubrum:43

Q5KJ96              	100.00%		F2SU01              	100.00%
Bootstrap support for Q5KJ96 as seed ortholog is 87%.
Bootstrap support for F2SU01 as seed ortholog is 87%.

Group of orthologs #1931. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 T.rubrum:87

Q5KE44              	100.00%		F2SK00              	100.00%
                    	       		F2SZ47              	16.83%
                    	       		F2SKG2              	12.94%
Bootstrap support for Q5KE44 as seed ortholog is 100%.
Bootstrap support for F2SK00 as seed ortholog is 99%.

Group of orthologs #1932. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 T.rubrum:43

Q5KBG1              	100.00%		F2SJM6              	100.00%
Bootstrap support for Q5KBG1 as seed ortholog is 100%.
Bootstrap support for F2SJM6 as seed ortholog is 82%.

Group of orthologs #1933. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 T.rubrum:34

Q5KJ24              	100.00%		F2SEH0              	100.00%
Bootstrap support for Q5KJ24 as seed ortholog is 100%.
Bootstrap support for F2SEH0 as seed ortholog is 92%.

Group of orthologs #1934. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 T.rubrum:189

Q5KGM3              	100.00%		F2SGR9              	100.00%
Bootstrap support for Q5KGM3 as seed ortholog is 100%.
Bootstrap support for F2SGR9 as seed ortholog is 100%.

Group of orthologs #1935. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 T.rubrum:189

Q5KM68              	100.00%		F2SCH8              	100.00%
Bootstrap support for Q5KM68 as seed ortholog is 100%.
Bootstrap support for F2SCH8 as seed ortholog is 100%.

Group of orthologs #1936. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 T.rubrum:189

Q5KF53              	100.00%		F2SRZ3              	100.00%
Bootstrap support for Q5KF53 as seed ortholog is 100%.
Bootstrap support for F2SRZ3 as seed ortholog is 100%.

Group of orthologs #1937. Best score 189 bits
Score difference with first non-orthologous sequence - C.neoformans:189 T.rubrum:189

Q5KQ70              	100.00%		F2SLI2              	100.00%
Bootstrap support for Q5KQ70 as seed ortholog is 100%.
Bootstrap support for F2SLI2 as seed ortholog is 100%.

Group of orthologs #1938. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 T.rubrum:188

Q5KCD7              	100.00%		F2SDK3              	100.00%
Bootstrap support for Q5KCD7 as seed ortholog is 100%.
Bootstrap support for F2SDK3 as seed ortholog is 100%.

Group of orthologs #1939. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 T.rubrum:188

P0CP92              	100.00%		F2SN98              	100.00%
Bootstrap support for P0CP92 as seed ortholog is 100%.
Bootstrap support for F2SN98 as seed ortholog is 100%.

Group of orthologs #1940. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 T.rubrum:188

Q5KAJ6              	100.00%		F2SJS8              	100.00%
Bootstrap support for Q5KAJ6 as seed ortholog is 100%.
Bootstrap support for F2SJS8 as seed ortholog is 100%.

Group of orthologs #1941. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 T.rubrum:188

P0CS30              	100.00%		F2SP41              	100.00%
Bootstrap support for P0CS30 as seed ortholog is 100%.
Bootstrap support for F2SP41 as seed ortholog is 100%.

Group of orthologs #1942. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 T.rubrum:11

Q5KMD1              	100.00%		F2SF99              	100.00%
Bootstrap support for Q5KMD1 as seed ortholog is 100%.
Bootstrap support for F2SF99 as seed ortholog is 79%.

Group of orthologs #1943. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 T.rubrum:188

Q5KGW8              	100.00%		F2SRF8              	100.00%
Bootstrap support for Q5KGW8 as seed ortholog is 100%.
Bootstrap support for F2SRF8 as seed ortholog is 100%.

Group of orthologs #1944. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 T.rubrum:188

Q5KK01              	100.00%		F2SQ46              	100.00%
Bootstrap support for Q5KK01 as seed ortholog is 100%.
Bootstrap support for F2SQ46 as seed ortholog is 100%.

Group of orthologs #1945. Best score 188 bits
Score difference with first non-orthologous sequence - C.neoformans:188 T.rubrum:188

Q5KJZ9              	100.00%		F2ST37              	100.00%
Bootstrap support for Q5KJZ9 as seed ortholog is 100%.
Bootstrap support for F2ST37 as seed ortholog is 100%.

Group of orthologs #1946. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 T.rubrum:187

Q5KBI8              	100.00%		F2SCD8              	100.00%
Bootstrap support for Q5KBI8 as seed ortholog is 100%.
Bootstrap support for F2SCD8 as seed ortholog is 100%.

Group of orthologs #1947. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 T.rubrum:187

Q5KAE9              	100.00%		F2SNA2              	100.00%
Bootstrap support for Q5KAE9 as seed ortholog is 100%.
Bootstrap support for F2SNA2 as seed ortholog is 100%.

Group of orthologs #1948. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubrum:123

Q5KIX3              	100.00%		F2SKY0              	100.00%
Bootstrap support for Q5KIX3 as seed ortholog is 86%.
Bootstrap support for F2SKY0 as seed ortholog is 99%.

Group of orthologs #1949. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 T.rubrum:187

Q5KE33              	100.00%		F2SQD7              	100.00%
Bootstrap support for Q5KE33 as seed ortholog is 100%.
Bootstrap support for F2SQD7 as seed ortholog is 100%.

Group of orthologs #1950. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:141 T.rubrum:126

P0CR36              	100.00%		F2SZH4              	100.00%
Bootstrap support for P0CR36 as seed ortholog is 99%.
Bootstrap support for F2SZH4 as seed ortholog is 99%.

Group of orthologs #1951. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:9 T.rubrum:137

Q5KG84              	100.00%		F2SRM0              	100.00%
Bootstrap support for Q5KG84 as seed ortholog is 51%.
Alternative seed ortholog is Q5KPC9 (9 bits away from this cluster)
Bootstrap support for F2SRM0 as seed ortholog is 99%.

Group of orthologs #1952. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:187 T.rubrum:187

Q5K837              	100.00%		F2SZ09              	100.00%
Bootstrap support for Q5K837 as seed ortholog is 100%.
Bootstrap support for F2SZ09 as seed ortholog is 100%.

Group of orthologs #1953. Best score 187 bits
Score difference with first non-orthologous sequence - C.neoformans:111 T.rubrum:92

Q5KQ67              	100.00%		F2SM48              	100.00%
Bootstrap support for Q5KQ67 as seed ortholog is 99%.
Bootstrap support for F2SM48 as seed ortholog is 98%.

Group of orthologs #1954. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubrum:136

Q5K8H5              	100.00%		F2SLE9              	100.00%
                    	       		F2SML7              	100.00%
Bootstrap support for Q5K8H5 as seed ortholog is 100%.
Bootstrap support for F2SLE9 as seed ortholog is 100%.
Bootstrap support for F2SML7 as seed ortholog is 100%.

Group of orthologs #1955. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubrum:186

P0CO84              	100.00%		F2SLB5              	100.00%
Bootstrap support for P0CO84 as seed ortholog is 100%.
Bootstrap support for F2SLB5 as seed ortholog is 100%.

Group of orthologs #1956. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubrum:186

Q5K7B3              	100.00%		F2SKB2              	100.00%
Bootstrap support for Q5K7B3 as seed ortholog is 100%.
Bootstrap support for F2SKB2 as seed ortholog is 100%.

Group of orthologs #1957. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubrum:186

Q5K774              	100.00%		F2SQW2              	100.00%
Bootstrap support for Q5K774 as seed ortholog is 100%.
Bootstrap support for F2SQW2 as seed ortholog is 100%.

Group of orthologs #1958. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubrum:186

P0CR48              	100.00%		F2STI9              	100.00%
Bootstrap support for P0CR48 as seed ortholog is 100%.
Bootstrap support for F2STI9 as seed ortholog is 100%.

Group of orthologs #1959. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubrum:186

Q5KQ08              	100.00%		F2SC56              	100.00%
Bootstrap support for Q5KQ08 as seed ortholog is 100%.
Bootstrap support for F2SC56 as seed ortholog is 100%.

Group of orthologs #1960. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubrum:186

Q5KA76              	100.00%		F2SSP1              	100.00%
Bootstrap support for Q5KA76 as seed ortholog is 100%.
Bootstrap support for F2SSP1 as seed ortholog is 100%.

Group of orthologs #1961. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubrum:186

Q5KP45              	100.00%		F2SGG5              	100.00%
Bootstrap support for Q5KP45 as seed ortholog is 100%.
Bootstrap support for F2SGG5 as seed ortholog is 100%.

Group of orthologs #1962. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubrum:186

Q5KD06              	100.00%		F2SWI2              	100.00%
Bootstrap support for Q5KD06 as seed ortholog is 100%.
Bootstrap support for F2SWI2 as seed ortholog is 100%.

Group of orthologs #1963. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubrum:94

Q5KEI7              	100.00%		F2SVA8              	100.00%
Bootstrap support for Q5KEI7 as seed ortholog is 100%.
Bootstrap support for F2SVA8 as seed ortholog is 99%.

Group of orthologs #1964. Best score 186 bits
Score difference with first non-orthologous sequence - C.neoformans:186 T.rubrum:186

Q5KHY8              	100.00%		F2SY88              	100.00%
Bootstrap support for Q5KHY8 as seed ortholog is 100%.
Bootstrap support for F2SY88 as seed ortholog is 100%.

Group of orthologs #1965. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubrum:111

Q5KA34              	100.00%		F2SR87              	100.00%
Q5KJ68              	45.94%		
Q5KJ74              	42.24%		
Bootstrap support for Q5KA34 as seed ortholog is 90%.
Bootstrap support for F2SR87 as seed ortholog is 99%.

Group of orthologs #1966. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 T.rubrum:185

Q5KD57              	100.00%		F2SBJ7              	100.00%
Bootstrap support for Q5KD57 as seed ortholog is 100%.
Bootstrap support for F2SBJ7 as seed ortholog is 100%.

Group of orthologs #1967. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 T.rubrum:185

P0CL86              	100.00%		F2SJ14              	100.00%
Bootstrap support for P0CL86 as seed ortholog is 100%.
Bootstrap support for F2SJ14 as seed ortholog is 100%.

Group of orthologs #1968. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 T.rubrum:185

P0CQ06              	100.00%		F2SUN0              	100.00%
Bootstrap support for P0CQ06 as seed ortholog is 100%.
Bootstrap support for F2SUN0 as seed ortholog is 100%.

Group of orthologs #1969. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 T.rubrum:185

P0CO86              	100.00%		F2SX73              	100.00%
Bootstrap support for P0CO86 as seed ortholog is 100%.
Bootstrap support for F2SX73 as seed ortholog is 100%.

Group of orthologs #1970. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 T.rubrum:185

Q5KBT3              	100.00%		F2ST64              	100.00%
Bootstrap support for Q5KBT3 as seed ortholog is 100%.
Bootstrap support for F2ST64 as seed ortholog is 100%.

Group of orthologs #1971. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:26 T.rubrum:185

Q5KGL4              	100.00%		F2SP33              	100.00%
Bootstrap support for Q5KGL4 as seed ortholog is 70%.
Alternative seed ortholog is Q5KD04 (26 bits away from this cluster)
Bootstrap support for F2SP33 as seed ortholog is 100%.

Group of orthologs #1972. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 T.rubrum:185

Q5K844              	100.00%		F2SZ19              	100.00%
Bootstrap support for Q5K844 as seed ortholog is 100%.
Bootstrap support for F2SZ19 as seed ortholog is 100%.

Group of orthologs #1973. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 T.rubrum:185

P0CO66              	100.00%		F2T110              	100.00%
Bootstrap support for P0CO66 as seed ortholog is 100%.
Bootstrap support for F2T110 as seed ortholog is 100%.

Group of orthologs #1974. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 T.rubrum:185

Q5KN18              	100.00%		F2SQJ2              	100.00%
Bootstrap support for Q5KN18 as seed ortholog is 100%.
Bootstrap support for F2SQJ2 as seed ortholog is 100%.

Group of orthologs #1975. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 T.rubrum:185

Q5KNX7              	100.00%		F2SQW6              	100.00%
Bootstrap support for Q5KNX7 as seed ortholog is 100%.
Bootstrap support for F2SQW6 as seed ortholog is 100%.

Group of orthologs #1976. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 T.rubrum:185

Q5KIU9              	100.00%		F2SYQ3              	100.00%
Bootstrap support for Q5KIU9 as seed ortholog is 100%.
Bootstrap support for F2SYQ3 as seed ortholog is 100%.

Group of orthologs #1977. Best score 185 bits
Score difference with first non-orthologous sequence - C.neoformans:185 T.rubrum:185

Q5KMY4              	100.00%		F2T0N3              	100.00%
Bootstrap support for Q5KMY4 as seed ortholog is 100%.
Bootstrap support for F2T0N3 as seed ortholog is 100%.

Group of orthologs #1978. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 T.rubrum:184

Q5KQ68              	100.00%		F2SE23              	100.00%
Q5KDG0              	59.86%		F2SJY3              	40.00%
Bootstrap support for Q5KQ68 as seed ortholog is 100%.
Bootstrap support for F2SE23 as seed ortholog is 100%.

Group of orthologs #1979. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 T.rubrum:107

Q5KIP7              	100.00%		F2SG96              	100.00%
Bootstrap support for Q5KIP7 as seed ortholog is 100%.
Bootstrap support for F2SG96 as seed ortholog is 99%.

Group of orthologs #1980. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 T.rubrum:184

Q5KH74              	100.00%		F2SHN9              	100.00%
Bootstrap support for Q5KH74 as seed ortholog is 100%.
Bootstrap support for F2SHN9 as seed ortholog is 100%.

Group of orthologs #1981. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 T.rubrum:184

P0CN58              	100.00%		F2SVK0              	100.00%
Bootstrap support for P0CN58 as seed ortholog is 100%.
Bootstrap support for F2SVK0 as seed ortholog is 100%.

Group of orthologs #1982. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 T.rubrum:184

Q5KDU5              	100.00%		F2SPR3              	100.00%
Bootstrap support for Q5KDU5 as seed ortholog is 100%.
Bootstrap support for F2SPR3 as seed ortholog is 100%.

Group of orthologs #1983. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 T.rubrum:184

Q5K6Z0              	100.00%		F2SWQ3              	100.00%
Bootstrap support for Q5K6Z0 as seed ortholog is 100%.
Bootstrap support for F2SWQ3 as seed ortholog is 100%.

Group of orthologs #1984. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 T.rubrum:184

Q5KKS4              	100.00%		F2SK42              	100.00%
Bootstrap support for Q5KKS4 as seed ortholog is 100%.
Bootstrap support for F2SK42 as seed ortholog is 100%.

Group of orthologs #1985. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:132 T.rubrum:121

Q5KE49              	100.00%		F2SSF2              	100.00%
Bootstrap support for Q5KE49 as seed ortholog is 99%.
Bootstrap support for F2SSF2 as seed ortholog is 99%.

Group of orthologs #1986. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 T.rubrum:184

Q5K719              	100.00%		F2SZW0              	100.00%
Bootstrap support for Q5K719 as seed ortholog is 100%.
Bootstrap support for F2SZW0 as seed ortholog is 100%.

Group of orthologs #1987. Best score 184 bits
Score difference with first non-orthologous sequence - C.neoformans:184 T.rubrum:184

Q5KLP4              	100.00%		F2SLL7              	100.00%
Bootstrap support for Q5KLP4 as seed ortholog is 100%.
Bootstrap support for F2SLL7 as seed ortholog is 100%.

Group of orthologs #1988. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 T.rubrum:183

P0CP08              	100.00%		F2SBS6              	100.00%
Bootstrap support for P0CP08 as seed ortholog is 100%.
Bootstrap support for F2SBS6 as seed ortholog is 100%.

Group of orthologs #1989. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 T.rubrum:183

P0CN98              	100.00%		F2SIE2              	100.00%
Bootstrap support for P0CN98 as seed ortholog is 100%.
Bootstrap support for F2SIE2 as seed ortholog is 100%.

Group of orthologs #1990. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 T.rubrum:183

P0CO06              	100.00%		F2SLN3              	100.00%
Bootstrap support for P0CO06 as seed ortholog is 100%.
Bootstrap support for F2SLN3 as seed ortholog is 100%.

Group of orthologs #1991. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 T.rubrum:183

Q5KFC6              	100.00%		F2SH41              	100.00%
Bootstrap support for Q5KFC6 as seed ortholog is 100%.
Bootstrap support for F2SH41 as seed ortholog is 100%.

Group of orthologs #1992. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 T.rubrum:183

Q5KDT0              	100.00%		F2SNM6              	100.00%
Bootstrap support for Q5KDT0 as seed ortholog is 100%.
Bootstrap support for F2SNM6 as seed ortholog is 100%.

Group of orthologs #1993. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 T.rubrum:183

Q5KCK8              	100.00%		F2SQ97              	100.00%
Bootstrap support for Q5KCK8 as seed ortholog is 100%.
Bootstrap support for F2SQ97 as seed ortholog is 100%.

Group of orthologs #1994. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 T.rubrum:183

Q5K9N6              	100.00%		F2SZA9              	100.00%
Bootstrap support for Q5K9N6 as seed ortholog is 100%.
Bootstrap support for F2SZA9 as seed ortholog is 100%.

Group of orthologs #1995. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 T.rubrum:183

Q5KHG0              	100.00%		F2ST88              	100.00%
Bootstrap support for Q5KHG0 as seed ortholog is 100%.
Bootstrap support for F2ST88 as seed ortholog is 100%.

Group of orthologs #1996. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 T.rubrum:183

Q5KBA1              	100.00%		F2SYS8              	100.00%
Bootstrap support for Q5KBA1 as seed ortholog is 100%.
Bootstrap support for F2SYS8 as seed ortholog is 100%.

Group of orthologs #1997. Best score 183 bits
Score difference with first non-orthologous sequence - C.neoformans:183 T.rubrum:183

Q5KM03              	100.00%		F2SS32              	100.00%
Bootstrap support for Q5KM03 as seed ortholog is 100%.
Bootstrap support for F2SS32 as seed ortholog is 100%.

Group of orthologs #1998. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:182 T.rubrum:182

Q5K8V6              	100.00%		F2SC92              	100.00%
Bootstrap support for Q5K8V6 as seed ortholog is 100%.
Bootstrap support for F2SC92 as seed ortholog is 100%.

Group of orthologs #1999. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:182 T.rubrum:182

P0CO98              	100.00%		F2SGV2              	100.00%
Bootstrap support for P0CO98 as seed ortholog is 100%.
Bootstrap support for F2SGV2 as seed ortholog is 100%.

Group of orthologs #2000. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:182 T.rubrum:182

Q5KCI8              	100.00%		F2SE77              	100.00%
Bootstrap support for Q5KCI8 as seed ortholog is 100%.
Bootstrap support for F2SE77 as seed ortholog is 100%.

Group of orthologs #2001. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:182 T.rubrum:6

Q5KIP1              	100.00%		F2SHU2              	100.00%
Bootstrap support for Q5KIP1 as seed ortholog is 100%.
Bootstrap support for F2SHU2 as seed ortholog is 89%.

Group of orthologs #2002. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:182 T.rubrum:182

Q5KID1              	100.00%		F2SP02              	100.00%
Bootstrap support for Q5KID1 as seed ortholog is 100%.
Bootstrap support for F2SP02 as seed ortholog is 100%.

Group of orthologs #2003. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:182 T.rubrum:182

P0CR18              	100.00%		F2T0G5              	100.00%
Bootstrap support for P0CR18 as seed ortholog is 100%.
Bootstrap support for F2T0G5 as seed ortholog is 100%.

Group of orthologs #2004. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:182 T.rubrum:182

Q5KPS6              	100.00%		F2SNC9              	100.00%
Bootstrap support for Q5KPS6 as seed ortholog is 100%.
Bootstrap support for F2SNC9 as seed ortholog is 100%.

Group of orthologs #2005. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:182 T.rubrum:182

Q5KKH4              	100.00%		F2SXV7              	100.00%
Bootstrap support for Q5KKH4 as seed ortholog is 100%.
Bootstrap support for F2SXV7 as seed ortholog is 100%.

Group of orthologs #2006. Best score 182 bits
Score difference with first non-orthologous sequence - C.neoformans:182 T.rubrum:182

Q5KNA8              	100.00%		F2SZ45              	100.00%
Bootstrap support for Q5KNA8 as seed ortholog is 100%.
Bootstrap support for F2SZ45 as seed ortholog is 100%.

Group of orthologs #2007. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 T.rubrum:181

Q5K892              	100.00%		F2SDQ1              	100.00%
Bootstrap support for Q5K892 as seed ortholog is 100%.
Bootstrap support for F2SDQ1 as seed ortholog is 100%.

Group of orthologs #2008. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 T.rubrum:181

Q5KHB4              	100.00%		F2SFE2              	100.00%
Bootstrap support for Q5KHB4 as seed ortholog is 100%.
Bootstrap support for F2SFE2 as seed ortholog is 100%.

Group of orthologs #2009. Best score 181 bits
Score difference with first non-orthologous sequence - C.neoformans:181 T.rubrum:181

Q5K6W5              	100.00%		F2SW16              	100.00%
Bootstrap support for Q5K6W5 as seed ortholog is 100%.
Bootstrap support for F2SW16 as seed ortholog is 100%.

Group of orthologs #2010. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 T.rubrum:180

P0CP16              	100.00%		F2SEW4              	100.00%
Bootstrap support for P0CP16 as seed ortholog is 100%.
Bootstrap support for F2SEW4 as seed ortholog is 100%.

Group of orthologs #2011. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 T.rubrum:180

Q5K827              	100.00%		F2SEW5              	100.00%
Bootstrap support for Q5K827 as seed ortholog is 100%.
Bootstrap support for F2SEW5 as seed ortholog is 100%.

Group of orthologs #2012. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 T.rubrum:180

P0CO02              	100.00%		F2SIE3              	100.00%
Bootstrap support for P0CO02 as seed ortholog is 100%.
Bootstrap support for F2SIE3 as seed ortholog is 100%.

Group of orthologs #2013. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 T.rubrum:180

P0CO70              	100.00%		F2STT5              	100.00%
Bootstrap support for P0CO70 as seed ortholog is 100%.
Bootstrap support for F2STT5 as seed ortholog is 100%.

Group of orthologs #2014. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 T.rubrum:180

Q5KAG0              	100.00%		F2SQ43              	100.00%
Bootstrap support for Q5KAG0 as seed ortholog is 100%.
Bootstrap support for F2SQ43 as seed ortholog is 100%.

Group of orthologs #2015. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 T.rubrum:180

Q5KN65              	100.00%		F2SEM1              	100.00%
Bootstrap support for Q5KN65 as seed ortholog is 100%.
Bootstrap support for F2SEM1 as seed ortholog is 100%.

Group of orthologs #2016. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 T.rubrum:180

Q5KHK0              	100.00%		F2SLI4              	100.00%
Bootstrap support for Q5KHK0 as seed ortholog is 100%.
Bootstrap support for F2SLI4 as seed ortholog is 100%.

Group of orthologs #2017. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:58 T.rubrum:180

Q5K818              	100.00%		F2SWX7              	100.00%
Bootstrap support for Q5K818 as seed ortholog is 99%.
Bootstrap support for F2SWX7 as seed ortholog is 100%.

Group of orthologs #2018. Best score 180 bits
Score difference with first non-orthologous sequence - C.neoformans:180 T.rubrum:180

Q5KK13              	100.00%		F2SNP3              	100.00%
Bootstrap support for Q5KK13 as seed ortholog is 100%.
Bootstrap support for F2SNP3 as seed ortholog is 100%.

Group of orthologs #2019. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 T.rubrum:179

Q5KC44              	100.00%		F2SFB2              	100.00%
Bootstrap support for Q5KC44 as seed ortholog is 100%.
Bootstrap support for F2SFB2 as seed ortholog is 100%.

Group of orthologs #2020. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 T.rubrum:179

Q5K8H7              	100.00%		F2SKM2              	100.00%
Bootstrap support for Q5K8H7 as seed ortholog is 100%.
Bootstrap support for F2SKM2 as seed ortholog is 100%.

Group of orthologs #2021. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 T.rubrum:179

Q5K9V4              	100.00%		F2SV46              	100.00%
Bootstrap support for Q5K9V4 as seed ortholog is 100%.
Bootstrap support for F2SV46 as seed ortholog is 100%.

Group of orthologs #2022. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 T.rubrum:179

Q5KJN1              	100.00%		F2SMU9              	100.00%
Bootstrap support for Q5KJN1 as seed ortholog is 100%.
Bootstrap support for F2SMU9 as seed ortholog is 100%.

Group of orthologs #2023. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 T.rubrum:179

Q5KB43              	100.00%		F2SXF9              	100.00%
Bootstrap support for Q5KB43 as seed ortholog is 100%.
Bootstrap support for F2SXF9 as seed ortholog is 100%.

Group of orthologs #2024. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 T.rubrum:179

Q5KC37              	100.00%		F2SYM2              	100.00%
Bootstrap support for Q5KC37 as seed ortholog is 100%.
Bootstrap support for F2SYM2 as seed ortholog is 100%.

Group of orthologs #2025. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 T.rubrum:179

Q5KJP5              	100.00%		F2SS18              	100.00%
Bootstrap support for Q5KJP5 as seed ortholog is 100%.
Bootstrap support for F2SS18 as seed ortholog is 100%.

Group of orthologs #2026. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:133 T.rubrum:135

Q5KFR2              	100.00%		F2SXN2              	100.00%
Bootstrap support for Q5KFR2 as seed ortholog is 100%.
Bootstrap support for F2SXN2 as seed ortholog is 100%.

Group of orthologs #2027. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 T.rubrum:179

Q5KKU0              	100.00%		F2SVW7              	100.00%
Bootstrap support for Q5KKU0 as seed ortholog is 100%.
Bootstrap support for F2SVW7 as seed ortholog is 100%.

Group of orthologs #2028. Best score 179 bits
Score difference with first non-orthologous sequence - C.neoformans:179 T.rubrum:179

Q5KJP6              	100.00%		F2SYI0              	100.00%
Bootstrap support for Q5KJP6 as seed ortholog is 100%.
Bootstrap support for F2SYI0 as seed ortholog is 100%.

Group of orthologs #2029. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 T.rubrum:178

Q5K9T5              	100.00%		F2SQR5              	100.00%
Bootstrap support for Q5K9T5 as seed ortholog is 100%.
Bootstrap support for F2SQR5 as seed ortholog is 100%.

Group of orthologs #2030. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:178 T.rubrum:178

Q5KMF7              	100.00%		F2SJK6              	100.00%
Bootstrap support for Q5KMF7 as seed ortholog is 100%.
Bootstrap support for F2SJK6 as seed ortholog is 100%.

Group of orthologs #2031. Best score 178 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubrum:178

Q5KHT5              	100.00%		F2SZS6              	100.00%
Bootstrap support for Q5KHT5 as seed ortholog is 99%.
Bootstrap support for F2SZS6 as seed ortholog is 100%.

Group of orthologs #2032. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:177 T.rubrum:177

Q5KJZ4              	100.00%		F2SC77              	100.00%
Bootstrap support for Q5KJZ4 as seed ortholog is 100%.
Bootstrap support for F2SC77 as seed ortholog is 100%.

Group of orthologs #2033. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:177 T.rubrum:177

P0CR46              	100.00%		F2SR14              	100.00%
Bootstrap support for P0CR46 as seed ortholog is 100%.
Bootstrap support for F2SR14 as seed ortholog is 100%.

Group of orthologs #2034. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:177 T.rubrum:177

Q5K7J3              	100.00%		F2SRS0              	100.00%
Bootstrap support for Q5K7J3 as seed ortholog is 100%.
Bootstrap support for F2SRS0 as seed ortholog is 100%.

Group of orthologs #2035. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:177 T.rubrum:177

Q5KHZ6              	100.00%		F2SJ50              	100.00%
Bootstrap support for Q5KHZ6 as seed ortholog is 100%.
Bootstrap support for F2SJ50 as seed ortholog is 100%.

Group of orthologs #2036. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:177 T.rubrum:177

Q5K9S1              	100.00%		F2SSL6              	100.00%
Bootstrap support for Q5K9S1 as seed ortholog is 100%.
Bootstrap support for F2SSL6 as seed ortholog is 100%.

Group of orthologs #2037. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:177 T.rubrum:177

Q5K7W0              	100.00%		F2SUJ8              	100.00%
Bootstrap support for Q5K7W0 as seed ortholog is 100%.
Bootstrap support for F2SUJ8 as seed ortholog is 100%.

Group of orthologs #2038. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:177 T.rubrum:177

Q5KNC7              	100.00%		F2SKJ3              	100.00%
Bootstrap support for Q5KNC7 as seed ortholog is 100%.
Bootstrap support for F2SKJ3 as seed ortholog is 100%.

Group of orthologs #2039. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:177 T.rubrum:177

Q5KHQ9              	100.00%		F2SR33              	100.00%
Bootstrap support for Q5KHQ9 as seed ortholog is 100%.
Bootstrap support for F2SR33 as seed ortholog is 100%.

Group of orthologs #2040. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:177 T.rubrum:177

Q5KIX6              	100.00%		F2ST31              	100.00%
Bootstrap support for Q5KIX6 as seed ortholog is 100%.
Bootstrap support for F2ST31 as seed ortholog is 100%.

Group of orthologs #2041. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:130 T.rubrum:177

Q5KLA5              	100.00%		F2SSC3              	100.00%
Bootstrap support for Q5KLA5 as seed ortholog is 99%.
Bootstrap support for F2SSC3 as seed ortholog is 100%.

Group of orthologs #2042. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:177 T.rubrum:177

Q5KI55              	100.00%		F2SWN5              	100.00%
Bootstrap support for Q5KI55 as seed ortholog is 100%.
Bootstrap support for F2SWN5 as seed ortholog is 100%.

Group of orthologs #2043. Best score 177 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubrum:100

Q5KPC4              	100.00%		F2SVZ1              	100.00%
Bootstrap support for Q5KPC4 as seed ortholog is 99%.
Bootstrap support for F2SVZ1 as seed ortholog is 99%.

Group of orthologs #2044. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 T.rubrum:14

Q5K9P3              	100.00%		F2SCM8              	100.00%
                    	       		F2SHP5              	100.00%
                    	       		F2SY85              	39.30%
Bootstrap support for Q5K9P3 as seed ortholog is 100%.
Bootstrap support for F2SCM8 as seed ortholog is 59%.
Alternative seed ortholog is F2SI89 (14 bits away from this cluster)
Bootstrap support for F2SHP5 as seed ortholog is 59%.
Alternative seed ortholog is F2SI89 (14 bits away from this cluster)

Group of orthologs #2045. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 T.rubrum:176

Q5KA03              	100.00%		F2SVQ0              	100.00%
Q5KPE0              	13.03%		
Bootstrap support for Q5KA03 as seed ortholog is 100%.
Bootstrap support for F2SVQ0 as seed ortholog is 100%.

Group of orthologs #2046. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 T.rubrum:176

Q5KE48              	100.00%		F2SF24              	100.00%
Bootstrap support for Q5KE48 as seed ortholog is 100%.
Bootstrap support for F2SF24 as seed ortholog is 100%.

Group of orthologs #2047. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 T.rubrum:176

Q5KGV9              	100.00%		F2SGW8              	100.00%
Bootstrap support for Q5KGV9 as seed ortholog is 100%.
Bootstrap support for F2SGW8 as seed ortholog is 100%.

Group of orthologs #2048. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 T.rubrum:176

Q5KG23              	100.00%		F2SLI8              	100.00%
Bootstrap support for Q5KG23 as seed ortholog is 100%.
Bootstrap support for F2SLI8 as seed ortholog is 100%.

Group of orthologs #2049. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubrum:123

Q5KFG5              	100.00%		F2SNK7              	100.00%
Bootstrap support for Q5KFG5 as seed ortholog is 99%.
Bootstrap support for F2SNK7 as seed ortholog is 99%.

Group of orthologs #2050. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 T.rubrum:176

Q5K8W6              	100.00%		F2SUK1              	100.00%
Bootstrap support for Q5K8W6 as seed ortholog is 100%.
Bootstrap support for F2SUK1 as seed ortholog is 100%.

Group of orthologs #2051. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 T.rubrum:176

Q5KHW4              	100.00%		F2SM27              	100.00%
Bootstrap support for Q5KHW4 as seed ortholog is 100%.
Bootstrap support for F2SM27 as seed ortholog is 100%.

Group of orthologs #2052. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 T.rubrum:176

Q5KLX2              	100.00%		F2SP15              	100.00%
Bootstrap support for Q5KLX2 as seed ortholog is 100%.
Bootstrap support for F2SP15 as seed ortholog is 100%.

Group of orthologs #2053. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 T.rubrum:176

Q5KGJ6              	100.00%		F2SZF0              	100.00%
Bootstrap support for Q5KGJ6 as seed ortholog is 100%.
Bootstrap support for F2SZF0 as seed ortholog is 100%.

Group of orthologs #2054. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 T.rubrum:100

Q5KNN5              	100.00%		F2SWR8              	100.00%
Bootstrap support for Q5KNN5 as seed ortholog is 100%.
Bootstrap support for F2SWR8 as seed ortholog is 99%.

Group of orthologs #2055. Best score 176 bits
Score difference with first non-orthologous sequence - C.neoformans:176 T.rubrum:176

Q5KP05              	100.00%		F2SXM5              	100.00%
Bootstrap support for Q5KP05 as seed ortholog is 100%.
Bootstrap support for F2SXM5 as seed ortholog is 100%.

Group of orthologs #2056. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 T.rubrum:175

Q5K9I0              	100.00%		F2SE68              	100.00%
Bootstrap support for Q5K9I0 as seed ortholog is 100%.
Bootstrap support for F2SE68 as seed ortholog is 100%.

Group of orthologs #2057. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 T.rubrum:175

Q5KGZ7              	100.00%		F2SDQ4              	100.00%
Bootstrap support for Q5KGZ7 as seed ortholog is 100%.
Bootstrap support for F2SDQ4 as seed ortholog is 100%.

Group of orthologs #2058. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 T.rubrum:106

Q5KEB8              	100.00%		F2SKL4              	100.00%
Bootstrap support for Q5KEB8 as seed ortholog is 100%.
Bootstrap support for F2SKL4 as seed ortholog is 99%.

Group of orthologs #2059. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 T.rubrum:175

Q5KL28              	100.00%		F2SW60              	100.00%
Bootstrap support for Q5KL28 as seed ortholog is 100%.
Bootstrap support for F2SW60 as seed ortholog is 100%.

Group of orthologs #2060. Best score 175 bits
Score difference with first non-orthologous sequence - C.neoformans:175 T.rubrum:175

Q5KQ99              	100.00%		F2SYL6              	100.00%
Bootstrap support for Q5KQ99 as seed ortholog is 100%.
Bootstrap support for F2SYL6 as seed ortholog is 100%.

Group of orthologs #2061. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:6 T.rubrum:58

Q5KN03              	100.00%		F2SGQ7              	100.00%
                    	       		F2SH50              	12.08%
Bootstrap support for Q5KN03 as seed ortholog is 45%.
Alternative seed ortholog is Q5KKZ4 (6 bits away from this cluster)
Bootstrap support for F2SGQ7 as seed ortholog is 91%.

Group of orthologs #2062. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 T.rubrum:174

Q5K6Y2              	100.00%		F2SD96              	100.00%
Bootstrap support for Q5K6Y2 as seed ortholog is 100%.
Bootstrap support for F2SD96 as seed ortholog is 100%.

Group of orthologs #2063. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 T.rubrum:174

P0CM82              	100.00%		F2SH79              	100.00%
Bootstrap support for P0CM82 as seed ortholog is 100%.
Bootstrap support for F2SH79 as seed ortholog is 100%.

Group of orthologs #2064. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 T.rubrum:174

Q5KED8              	100.00%		F2STD0              	100.00%
Bootstrap support for Q5KED8 as seed ortholog is 100%.
Bootstrap support for F2STD0 as seed ortholog is 100%.

Group of orthologs #2065. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:88 T.rubrum:108

Q5KDR7              	100.00%		F2SV54              	100.00%
Bootstrap support for Q5KDR7 as seed ortholog is 98%.
Bootstrap support for F2SV54 as seed ortholog is 99%.

Group of orthologs #2066. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 T.rubrum:174

Q5KBA9              	100.00%		F2SZ92              	100.00%
Bootstrap support for Q5KBA9 as seed ortholog is 100%.
Bootstrap support for F2SZ92 as seed ortholog is 100%.

Group of orthologs #2067. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 T.rubrum:174

Q5KJL6              	100.00%		F2SUU0              	100.00%
Bootstrap support for Q5KJL6 as seed ortholog is 100%.
Bootstrap support for F2SUU0 as seed ortholog is 100%.

Group of orthologs #2068. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 T.rubrum:174

Q5KGM8              	100.00%		F2SZH2              	100.00%
Bootstrap support for Q5KGM8 as seed ortholog is 100%.
Bootstrap support for F2SZH2 as seed ortholog is 100%.

Group of orthologs #2069. Best score 174 bits
Score difference with first non-orthologous sequence - C.neoformans:174 T.rubrum:174

Q5KQ41              	100.00%		F2SZJ1              	100.00%
Bootstrap support for Q5KQ41 as seed ortholog is 100%.
Bootstrap support for F2SZJ1 as seed ortholog is 100%.

Group of orthologs #2070. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 T.rubrum:173

P0CP44              	100.00%		F2SC64              	100.00%
Bootstrap support for P0CP44 as seed ortholog is 100%.
Bootstrap support for F2SC64 as seed ortholog is 100%.

Group of orthologs #2071. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 T.rubrum:173

Q5KA81              	100.00%		F2SGS4              	100.00%
Bootstrap support for Q5KA81 as seed ortholog is 100%.
Bootstrap support for F2SGS4 as seed ortholog is 100%.

Group of orthologs #2072. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 T.rubrum:173

Q5KIP3              	100.00%		F2SE42              	100.00%
Bootstrap support for Q5KIP3 as seed ortholog is 100%.
Bootstrap support for F2SE42 as seed ortholog is 100%.

Group of orthologs #2073. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 T.rubrum:173

Q5KFR7              	100.00%		F2SIG9              	100.00%
Bootstrap support for Q5KFR7 as seed ortholog is 100%.
Bootstrap support for F2SIG9 as seed ortholog is 100%.

Group of orthologs #2074. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 T.rubrum:173

Q5K7S5              	100.00%		F2SUK0              	100.00%
Bootstrap support for Q5K7S5 as seed ortholog is 100%.
Bootstrap support for F2SUK0 as seed ortholog is 100%.

Group of orthologs #2075. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 T.rubrum:173

Q5K7I0              	100.00%		F2SWI1              	100.00%
Bootstrap support for Q5K7I0 as seed ortholog is 100%.
Bootstrap support for F2SWI1 as seed ortholog is 100%.

Group of orthologs #2076. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 T.rubrum:79

Q5KDC3              	100.00%		F2STB8              	100.00%
Bootstrap support for Q5KDC3 as seed ortholog is 100%.
Bootstrap support for F2STB8 as seed ortholog is 88%.

Group of orthologs #2077. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 T.rubrum:173

Q5KFU9              	100.00%		F2SR30              	100.00%
Bootstrap support for Q5KFU9 as seed ortholog is 100%.
Bootstrap support for F2SR30 as seed ortholog is 100%.

Group of orthologs #2078. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 T.rubrum:173

Q5KMY6              	100.00%		F2SJR2              	100.00%
Bootstrap support for Q5KMY6 as seed ortholog is 100%.
Bootstrap support for F2SJR2 as seed ortholog is 100%.

Group of orthologs #2079. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubrum:112

Q5KLY1              	100.00%		F2SNG1              	100.00%
Bootstrap support for Q5KLY1 as seed ortholog is 99%.
Bootstrap support for F2SNG1 as seed ortholog is 99%.

Group of orthologs #2080. Best score 173 bits
Score difference with first non-orthologous sequence - C.neoformans:173 T.rubrum:173

Q5KME8              	100.00%		F2SYV0              	100.00%
Bootstrap support for Q5KME8 as seed ortholog is 100%.
Bootstrap support for F2SYV0 as seed ortholog is 100%.

Group of orthologs #2081. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:172 T.rubrum:103

Q5KMU8              	100.00%		F2SYU7              	100.00%
Q5KAQ2              	66.55%		
Q5KN91              	63.03%		
Q5KMX5              	30.63%		
Bootstrap support for Q5KMU8 as seed ortholog is 100%.
Bootstrap support for F2SYU7 as seed ortholog is 99%.

Group of orthologs #2082. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:1 T.rubrum:87

Q5KFP9              	100.00%		F2SYH9              	100.00%
Q5KFP6              	35.96%		
Q5KAR9              	19.80%		
Bootstrap support for Q5KFP9 as seed ortholog is 54%.
Alternative seed ortholog is Q5KK27 (1 bits away from this cluster)
Bootstrap support for F2SYH9 as seed ortholog is 97%.

Group of orthologs #2083. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:172 T.rubrum:172

P0CM34              	100.00%		F2SPV5              	100.00%
Bootstrap support for P0CM34 as seed ortholog is 100%.
Bootstrap support for F2SPV5 as seed ortholog is 100%.

Group of orthologs #2084. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:172 T.rubrum:172

Q5K7W8              	100.00%		F2ST83              	100.00%
Bootstrap support for Q5K7W8 as seed ortholog is 100%.
Bootstrap support for F2ST83 as seed ortholog is 100%.

Group of orthologs #2085. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:172 T.rubrum:172

Q5KAS6              	100.00%		F2SS57              	100.00%
Bootstrap support for Q5KAS6 as seed ortholog is 100%.
Bootstrap support for F2SS57 as seed ortholog is 100%.

Group of orthologs #2086. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:46 T.rubrum:62

Q5KJW2              	100.00%		F2SPJ2              	100.00%
Bootstrap support for Q5KJW2 as seed ortholog is 95%.
Bootstrap support for F2SPJ2 as seed ortholog is 97%.

Group of orthologs #2087. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:172 T.rubrum:172

Q5KAN9              	100.00%		F2SXZ6              	100.00%
Bootstrap support for Q5KAN9 as seed ortholog is 100%.
Bootstrap support for F2SXZ6 as seed ortholog is 100%.

Group of orthologs #2088. Best score 172 bits
Score difference with first non-orthologous sequence - C.neoformans:57 T.rubrum:12

Q5KM13              	100.00%		F2SV77              	100.00%
Bootstrap support for Q5KM13 as seed ortholog is 96%.
Bootstrap support for F2SV77 as seed ortholog is 57%.
Alternative seed ortholog is F2T1A6 (12 bits away from this cluster)

Group of orthologs #2089. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 T.rubrum:171

Q5KB03              	100.00%		F2SCR8              	100.00%
Bootstrap support for Q5KB03 as seed ortholog is 100%.
Bootstrap support for F2SCR8 as seed ortholog is 100%.

Group of orthologs #2090. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 T.rubrum:171

Q5KHL3              	100.00%		F2SF16              	100.00%
Bootstrap support for Q5KHL3 as seed ortholog is 100%.
Bootstrap support for F2SF16 as seed ortholog is 100%.

Group of orthologs #2091. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 T.rubrum:171

Q5KC59              	100.00%		F2SKD4              	100.00%
Bootstrap support for Q5KC59 as seed ortholog is 100%.
Bootstrap support for F2SKD4 as seed ortholog is 100%.

Group of orthologs #2092. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 T.rubrum:171

Q5KDI9              	100.00%		F2SKN1              	100.00%
Bootstrap support for Q5KDI9 as seed ortholog is 100%.
Bootstrap support for F2SKN1 as seed ortholog is 100%.

Group of orthologs #2093. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 T.rubrum:171

Q5KKM7              	100.00%		F2SFN3              	100.00%
Bootstrap support for Q5KKM7 as seed ortholog is 100%.
Bootstrap support for F2SFN3 as seed ortholog is 100%.

Group of orthologs #2094. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 T.rubrum:171

Q5K7M2              	100.00%		F2SUZ8              	100.00%
Bootstrap support for Q5K7M2 as seed ortholog is 100%.
Bootstrap support for F2SUZ8 as seed ortholog is 100%.

Group of orthologs #2095. Best score 171 bits
Score difference with first non-orthologous sequence - C.neoformans:171 T.rubrum:171

Q5KQ42              	100.00%		F2SFL4              	100.00%
Bootstrap support for Q5KQ42 as seed ortholog is 100%.
Bootstrap support for F2SFL4 as seed ortholog is 100%.

Group of orthologs #2096. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 T.rubrum:170

Q5K7C8              	100.00%		F2SFU7              	100.00%
Bootstrap support for Q5K7C8 as seed ortholog is 100%.
Bootstrap support for F2SFU7 as seed ortholog is 100%.

Group of orthologs #2097. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:37 T.rubrum:170

Q5KHB8              	100.00%		F2SC17              	100.00%
Bootstrap support for Q5KHB8 as seed ortholog is 90%.
Bootstrap support for F2SC17 as seed ortholog is 100%.

Group of orthologs #2098. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 T.rubrum:170

Q5KFS9              	100.00%		F2SF58              	100.00%
Bootstrap support for Q5KFS9 as seed ortholog is 100%.
Bootstrap support for F2SF58 as seed ortholog is 100%.

Group of orthologs #2099. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 T.rubrum:170

P0CN20              	100.00%		F2SQF9              	100.00%
Bootstrap support for P0CN20 as seed ortholog is 100%.
Bootstrap support for F2SQF9 as seed ortholog is 100%.

Group of orthologs #2100. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 T.rubrum:170

P0CQ52              	100.00%		F2SR22              	100.00%
Bootstrap support for P0CQ52 as seed ortholog is 100%.
Bootstrap support for F2SR22 as seed ortholog is 100%.

Group of orthologs #2101. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 T.rubrum:170

Q5KDN0              	100.00%		F2ST69              	100.00%
Bootstrap support for Q5KDN0 as seed ortholog is 100%.
Bootstrap support for F2ST69 as seed ortholog is 100%.

Group of orthologs #2102. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubrum:8

Q5K713              	100.00%		F2SZP2              	100.00%
Bootstrap support for Q5K713 as seed ortholog is 99%.
Bootstrap support for F2SZP2 as seed ortholog is 57%.
Alternative seed ortholog is F2SXX1 (8 bits away from this cluster)

Group of orthologs #2103. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 T.rubrum:170

Q5KDF1              	100.00%		F2SUQ8              	100.00%
Bootstrap support for Q5KDF1 as seed ortholog is 100%.
Bootstrap support for F2SUQ8 as seed ortholog is 100%.

Group of orthologs #2104. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 T.rubrum:170

Q5KJX3              	100.00%		F2SQI1              	100.00%
Bootstrap support for Q5KJX3 as seed ortholog is 100%.
Bootstrap support for F2SQI1 as seed ortholog is 100%.

Group of orthologs #2105. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:125 T.rubrum:97

Q5KN04              	100.00%		F2SP25              	100.00%
Bootstrap support for Q5KN04 as seed ortholog is 99%.
Bootstrap support for F2SP25 as seed ortholog is 99%.

Group of orthologs #2106. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 T.rubrum:170

Q5KM51              	100.00%		F2SQ45              	100.00%
Bootstrap support for Q5KM51 as seed ortholog is 100%.
Bootstrap support for F2SQ45 as seed ortholog is 100%.

Group of orthologs #2107. Best score 170 bits
Score difference with first non-orthologous sequence - C.neoformans:170 T.rubrum:170

Q5KFR3              	100.00%		F2T077              	100.00%
Bootstrap support for Q5KFR3 as seed ortholog is 100%.
Bootstrap support for F2T077 as seed ortholog is 100%.

Group of orthologs #2108. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 T.rubrum:169

Q5KCX5              	100.00%		F2SF27              	100.00%
Bootstrap support for Q5KCX5 as seed ortholog is 100%.
Bootstrap support for F2SF27 as seed ortholog is 100%.

Group of orthologs #2109. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 T.rubrum:169

Q5K7A6              	100.00%		F2SN69              	100.00%
Bootstrap support for Q5K7A6 as seed ortholog is 100%.
Bootstrap support for F2SN69 as seed ortholog is 100%.

Group of orthologs #2110. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 T.rubrum:169

Q5KLJ6              	100.00%		F2SCD3              	100.00%
Bootstrap support for Q5KLJ6 as seed ortholog is 100%.
Bootstrap support for F2SCD3 as seed ortholog is 100%.

Group of orthologs #2111. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 T.rubrum:169

Q5KK99              	100.00%		F2SFT0              	100.00%
Bootstrap support for Q5KK99 as seed ortholog is 100%.
Bootstrap support for F2SFT0 as seed ortholog is 100%.

Group of orthologs #2112. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 T.rubrum:169

Q5KBS5              	100.00%		F2SRM5              	100.00%
Bootstrap support for Q5KBS5 as seed ortholog is 100%.
Bootstrap support for F2SRM5 as seed ortholog is 100%.

Group of orthologs #2113. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubrum:169

Q5KN37              	100.00%		F2SS78              	100.00%
Bootstrap support for Q5KN37 as seed ortholog is 100%.
Bootstrap support for F2SS78 as seed ortholog is 100%.

Group of orthologs #2114. Best score 169 bits
Score difference with first non-orthologous sequence - C.neoformans:169 T.rubrum:169

Q5KMH2              	100.00%		F2T0X2              	100.00%
Bootstrap support for Q5KMH2 as seed ortholog is 100%.
Bootstrap support for F2T0X2 as seed ortholog is 100%.

Group of orthologs #2115. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:20 T.rubrum:50

Q5KHE7              	100.00%		F2SR60              	100.00%
Q5KEI5              	31.67%		
Bootstrap support for Q5KHE7 as seed ortholog is 74%.
Alternative seed ortholog is Q5KFH1 (20 bits away from this cluster)
Bootstrap support for F2SR60 as seed ortholog is 81%.

Group of orthologs #2116. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 T.rubrum:168

Q5KFJ5              	100.00%		F2SGJ2              	100.00%
Bootstrap support for Q5KFJ5 as seed ortholog is 100%.
Bootstrap support for F2SGJ2 as seed ortholog is 100%.

Group of orthologs #2117. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 T.rubrum:168

Q5KJ00              	100.00%		F2SEE0              	100.00%
Bootstrap support for Q5KJ00 as seed ortholog is 100%.
Bootstrap support for F2SEE0 as seed ortholog is 100%.

Group of orthologs #2118. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 T.rubrum:168

Q5K7B9              	100.00%		F2SR35              	100.00%
Bootstrap support for Q5K7B9 as seed ortholog is 100%.
Bootstrap support for F2SR35 as seed ortholog is 100%.

Group of orthologs #2119. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 T.rubrum:168

Q5KE79              	100.00%		F2SLV4              	100.00%
Bootstrap support for Q5KE79 as seed ortholog is 100%.
Bootstrap support for F2SLV4 as seed ortholog is 100%.

Group of orthologs #2120. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 T.rubrum:168

Q5KMK5              	100.00%		F2SEN9              	100.00%
Bootstrap support for Q5KMK5 as seed ortholog is 100%.
Bootstrap support for F2SEN9 as seed ortholog is 100%.

Group of orthologs #2121. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 T.rubrum:168

Q5KCY2              	100.00%		F2SNT0              	100.00%
Bootstrap support for Q5KCY2 as seed ortholog is 100%.
Bootstrap support for F2SNT0 as seed ortholog is 100%.

Group of orthologs #2122. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 T.rubrum:168

Q5KL21              	100.00%		F2SKB5              	100.00%
Bootstrap support for Q5KL21 as seed ortholog is 100%.
Bootstrap support for F2SKB5 as seed ortholog is 100%.

Group of orthologs #2123. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 T.rubrum:168

Q5KDF8              	100.00%		F2SSY6              	100.00%
Bootstrap support for Q5KDF8 as seed ortholog is 100%.
Bootstrap support for F2SSY6 as seed ortholog is 100%.

Group of orthologs #2124. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 T.rubrum:168

Q5K764              	100.00%		F2SZH5              	100.00%
Bootstrap support for Q5K764 as seed ortholog is 100%.
Bootstrap support for F2SZH5 as seed ortholog is 100%.

Group of orthologs #2125. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 T.rubrum:119

Q5KDH4              	100.00%		F2SVC1              	100.00%
Bootstrap support for Q5KDH4 as seed ortholog is 100%.
Bootstrap support for F2SVC1 as seed ortholog is 99%.

Group of orthologs #2126. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 T.rubrum:168

Q5KP58              	100.00%		F2SLB2              	100.00%
Bootstrap support for Q5KP58 as seed ortholog is 100%.
Bootstrap support for F2SLB2 as seed ortholog is 100%.

Group of orthologs #2127. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 T.rubrum:168

Q5KCP3              	100.00%		F2SXS2              	100.00%
Bootstrap support for Q5KCP3 as seed ortholog is 100%.
Bootstrap support for F2SXS2 as seed ortholog is 100%.

Group of orthologs #2128. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 T.rubrum:168

Q5KLA0              	100.00%		F2SQE1              	100.00%
Bootstrap support for Q5KLA0 as seed ortholog is 100%.
Bootstrap support for F2SQE1 as seed ortholog is 100%.

Group of orthologs #2129. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 T.rubrum:168

Q5KFQ4              	100.00%		F2SW69              	100.00%
Bootstrap support for Q5KFQ4 as seed ortholog is 100%.
Bootstrap support for F2SW69 as seed ortholog is 100%.

Group of orthologs #2130. Best score 168 bits
Score difference with first non-orthologous sequence - C.neoformans:168 T.rubrum:168

Q5KIL1              	100.00%		F2SUM8              	100.00%
Bootstrap support for Q5KIL1 as seed ortholog is 100%.
Bootstrap support for F2SUM8 as seed ortholog is 100%.

Group of orthologs #2131. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 T.rubrum:167

Q5KKK1              	100.00%		F2SJ60              	100.00%
Bootstrap support for Q5KKK1 as seed ortholog is 100%.
Bootstrap support for F2SJ60 as seed ortholog is 100%.

Group of orthologs #2132. Best score 167 bits
Score difference with first non-orthologous sequence - C.neoformans:167 T.rubrum:167

Q5KEH2              	100.00%		F2T164              	100.00%
Bootstrap support for Q5KEH2 as seed ortholog is 100%.
Bootstrap support for F2T164 as seed ortholog is 100%.

Group of orthologs #2133. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 T.rubrum:166

Q5KAM6              	100.00%		F2SZN6              	100.00%
                    	       		F2SRQ4              	12.08%
Bootstrap support for Q5KAM6 as seed ortholog is 100%.
Bootstrap support for F2SZN6 as seed ortholog is 100%.

Group of orthologs #2134. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 T.rubrum:86

P0CS62              	100.00%		F2SDI0              	100.00%
Bootstrap support for P0CS62 as seed ortholog is 100%.
Bootstrap support for F2SDI0 as seed ortholog is 100%.

Group of orthologs #2135. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 T.rubrum:166

Q5KBQ8              	100.00%		F2SFS1              	100.00%
Bootstrap support for Q5KBQ8 as seed ortholog is 100%.
Bootstrap support for F2SFS1 as seed ortholog is 100%.

Group of orthologs #2136. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 T.rubrum:166

Q5K8W2              	100.00%		F2SK71              	100.00%
Bootstrap support for Q5K8W2 as seed ortholog is 100%.
Bootstrap support for F2SK71 as seed ortholog is 100%.

Group of orthologs #2137. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 T.rubrum:166

P0CQ44              	100.00%		F2SQW5              	100.00%
Bootstrap support for P0CQ44 as seed ortholog is 100%.
Bootstrap support for F2SQW5 as seed ortholog is 100%.

Group of orthologs #2138. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 T.rubrum:166

Q5K9R1              	100.00%		F2SSS5              	100.00%
Bootstrap support for Q5K9R1 as seed ortholog is 100%.
Bootstrap support for F2SSS5 as seed ortholog is 100%.

Group of orthologs #2139. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 T.rubrum:166

Q5KEC8              	100.00%		F2SU89              	100.00%
Bootstrap support for Q5KEC8 as seed ortholog is 100%.
Bootstrap support for F2SU89 as seed ortholog is 100%.

Group of orthologs #2140. Best score 166 bits
Score difference with first non-orthologous sequence - C.neoformans:166 T.rubrum:166

Q5KNT6              	100.00%		F2SKX9              	100.00%
Bootstrap support for Q5KNT6 as seed ortholog is 100%.
Bootstrap support for F2SKX9 as seed ortholog is 100%.

Group of orthologs #2141. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 T.rubrum:91

Q5KK19              	100.00%		F2SJM4              	100.00%
                    	       		F2SCB2              	28.87%
                    	       		F2SSI7              	25.15%
                    	       		F2SKM8              	11.76%
Bootstrap support for Q5KK19 as seed ortholog is 100%.
Bootstrap support for F2SJM4 as seed ortholog is 98%.

Group of orthologs #2142. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 T.rubrum:165

Q5K748              	100.00%		F2SCG7              	100.00%
Bootstrap support for Q5K748 as seed ortholog is 100%.
Bootstrap support for F2SCG7 as seed ortholog is 100%.

Group of orthologs #2143. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 T.rubrum:165

Q5K9S2              	100.00%		F2SD45              	100.00%
Bootstrap support for Q5K9S2 as seed ortholog is 100%.
Bootstrap support for F2SD45 as seed ortholog is 100%.

Group of orthologs #2144. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 T.rubrum:165

Q5K832              	100.00%		F2SGA1              	100.00%
Bootstrap support for Q5K832 as seed ortholog is 100%.
Bootstrap support for F2SGA1 as seed ortholog is 100%.

Group of orthologs #2145. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 T.rubrum:165

Q5KA60              	100.00%		F2SLW8              	100.00%
Bootstrap support for Q5KA60 as seed ortholog is 100%.
Bootstrap support for F2SLW8 as seed ortholog is 100%.

Group of orthologs #2146. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 T.rubrum:165

Q5KLD2              	100.00%		F2SE99              	100.00%
Bootstrap support for Q5KLD2 as seed ortholog is 100%.
Bootstrap support for F2SE99 as seed ortholog is 100%.

Group of orthologs #2147. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 T.rubrum:165

P0CM26              	100.00%		F2SW12              	100.00%
Bootstrap support for P0CM26 as seed ortholog is 100%.
Bootstrap support for F2SW12 as seed ortholog is 100%.

Group of orthologs #2148. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 T.rubrum:165

Q5KDV9              	100.00%		F2SR73              	100.00%
Bootstrap support for Q5KDV9 as seed ortholog is 100%.
Bootstrap support for F2SR73 as seed ortholog is 100%.

Group of orthologs #2149. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 T.rubrum:165

Q5KBH4              	100.00%		F2SU13              	100.00%
Bootstrap support for Q5KBH4 as seed ortholog is 100%.
Bootstrap support for F2SU13 as seed ortholog is 100%.

Group of orthologs #2150. Best score 165 bits
Score difference with first non-orthologous sequence - C.neoformans:165 T.rubrum:165

Q5KN73              	100.00%		F2SRM2              	100.00%
Bootstrap support for Q5KN73 as seed ortholog is 100%.
Bootstrap support for F2SRM2 as seed ortholog is 100%.

Group of orthologs #2151. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 T.rubrum:164

P0CO00              	100.00%		F2SN93              	100.00%
Bootstrap support for P0CO00 as seed ortholog is 100%.
Bootstrap support for F2SN93 as seed ortholog is 100%.

Group of orthologs #2152. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 T.rubrum:164

Q5K9Y6              	100.00%		F2SK81              	100.00%
Bootstrap support for Q5K9Y6 as seed ortholog is 100%.
Bootstrap support for F2SK81 as seed ortholog is 100%.

Group of orthologs #2153. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 T.rubrum:164

P0CS95              	100.00%		F2SQ87              	100.00%
Bootstrap support for P0CS95 as seed ortholog is 100%.
Bootstrap support for F2SQ87 as seed ortholog is 100%.

Group of orthologs #2154. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 T.rubrum:164

P0CN00              	100.00%		F2SSK7              	100.00%
Bootstrap support for P0CN00 as seed ortholog is 100%.
Bootstrap support for F2SSK7 as seed ortholog is 100%.

Group of orthologs #2155. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 T.rubrum:164

Q5KCU5              	100.00%		F2SMS8              	100.00%
Bootstrap support for Q5KCU5 as seed ortholog is 100%.
Bootstrap support for F2SMS8 as seed ortholog is 100%.

Group of orthologs #2156. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 T.rubrum:164

Q5KPN8              	100.00%		F2SCD4              	100.00%
Bootstrap support for Q5KPN8 as seed ortholog is 100%.
Bootstrap support for F2SCD4 as seed ortholog is 100%.

Group of orthologs #2157. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 T.rubrum:164

Q5KK70              	100.00%		F2SN80              	100.00%
Bootstrap support for Q5KK70 as seed ortholog is 100%.
Bootstrap support for F2SN80 as seed ortholog is 100%.

Group of orthologs #2158. Best score 164 bits
Score difference with first non-orthologous sequence - C.neoformans:164 T.rubrum:164

Q5KHD5              	100.00%		F2SXN9              	100.00%
Bootstrap support for Q5KHD5 as seed ortholog is 100%.
Bootstrap support for F2SXN9 as seed ortholog is 100%.

Group of orthologs #2159. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 T.rubrum:163

Q5KC19              	100.00%		F2SFY7              	100.00%
                    	       		F2SZR9              	13.07%
Bootstrap support for Q5KC19 as seed ortholog is 100%.
Bootstrap support for F2SFY7 as seed ortholog is 100%.

Group of orthologs #2160. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 T.rubrum:163

Q5KD43              	100.00%		F2SG18              	100.00%
Bootstrap support for Q5KD43 as seed ortholog is 100%.
Bootstrap support for F2SG18 as seed ortholog is 100%.

Group of orthologs #2161. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 T.rubrum:163

Q5K8V5              	100.00%		F2SPP3              	100.00%
Bootstrap support for Q5K8V5 as seed ortholog is 100%.
Bootstrap support for F2SPP3 as seed ortholog is 100%.

Group of orthologs #2162. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 T.rubrum:163

Q5KHU5              	100.00%		F2SP55              	100.00%
Bootstrap support for Q5KHU5 as seed ortholog is 100%.
Bootstrap support for F2SP55 as seed ortholog is 100%.

Group of orthologs #2163. Best score 163 bits
Score difference with first non-orthologous sequence - C.neoformans:163 T.rubrum:163

Q5KMQ6              	100.00%		F2SYN1              	100.00%
Bootstrap support for Q5KMQ6 as seed ortholog is 100%.
Bootstrap support for F2SYN1 as seed ortholog is 100%.

Group of orthologs #2164. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 T.rubrum:162

Q5KDS7              	100.00%		F2SDX6              	100.00%
Bootstrap support for Q5KDS7 as seed ortholog is 100%.
Bootstrap support for F2SDX6 as seed ortholog is 100%.

Group of orthologs #2165. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 T.rubrum:162

Q5KIH4              	100.00%		F2SCJ7              	100.00%
Bootstrap support for Q5KIH4 as seed ortholog is 100%.
Bootstrap support for F2SCJ7 as seed ortholog is 100%.

Group of orthologs #2166. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 T.rubrum:162

Q5K9Z0              	100.00%		F2SRS2              	100.00%
Bootstrap support for Q5K9Z0 as seed ortholog is 100%.
Bootstrap support for F2SRS2 as seed ortholog is 100%.

Group of orthologs #2167. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 T.rubrum:162

Q5KL26              	100.00%		F2SJ35              	100.00%
Bootstrap support for Q5KL26 as seed ortholog is 100%.
Bootstrap support for F2SJ35 as seed ortholog is 100%.

Group of orthologs #2168. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 T.rubrum:162

Q5KG96              	100.00%		F2SU12              	100.00%
Bootstrap support for Q5KG96 as seed ortholog is 100%.
Bootstrap support for F2SU12 as seed ortholog is 100%.

Group of orthologs #2169. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 T.rubrum:45

Q5KNA5              	100.00%		F2SWV9              	100.00%
Bootstrap support for Q5KNA5 as seed ortholog is 100%.
Bootstrap support for F2SWV9 as seed ortholog is 75%.

Group of orthologs #2170. Best score 162 bits
Score difference with first non-orthologous sequence - C.neoformans:162 T.rubrum:162

Q5KNH3              	100.00%		F2SXS9              	100.00%
Bootstrap support for Q5KNH3 as seed ortholog is 100%.
Bootstrap support for F2SXS9 as seed ortholog is 100%.

Group of orthologs #2171. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 T.rubrum:161

Q5KAN7              	100.00%		F2SHY5              	100.00%
Bootstrap support for Q5KAN7 as seed ortholog is 100%.
Bootstrap support for F2SHY5 as seed ortholog is 100%.

Group of orthologs #2172. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 T.rubrum:161

Q5K6X0              	100.00%		F2SQZ1              	100.00%
Bootstrap support for Q5K6X0 as seed ortholog is 100%.
Bootstrap support for F2SQZ1 as seed ortholog is 100%.

Group of orthologs #2173. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 T.rubrum:161

Q5KLP2              	100.00%		F2SFX2              	100.00%
Bootstrap support for Q5KLP2 as seed ortholog is 100%.
Bootstrap support for F2SFX2 as seed ortholog is 100%.

Group of orthologs #2174. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 T.rubrum:161

Q5KIU3              	100.00%		F2SLK5              	100.00%
Bootstrap support for Q5KIU3 as seed ortholog is 100%.
Bootstrap support for F2SLK5 as seed ortholog is 100%.

Group of orthologs #2175. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 T.rubrum:161

Q5KKV3              	100.00%		F2SR67              	100.00%
Bootstrap support for Q5KKV3 as seed ortholog is 100%.
Bootstrap support for F2SR67 as seed ortholog is 100%.

Group of orthologs #2176. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 T.rubrum:87

Q5KP43              	100.00%		F2SQD0              	100.00%
Bootstrap support for Q5KP43 as seed ortholog is 100%.
Bootstrap support for F2SQD0 as seed ortholog is 99%.

Group of orthologs #2177. Best score 161 bits
Score difference with first non-orthologous sequence - C.neoformans:161 T.rubrum:161

Q5KPG4              	100.00%		F2SXE2              	100.00%
Bootstrap support for Q5KPG4 as seed ortholog is 100%.
Bootstrap support for F2SXE2 as seed ortholog is 100%.

Group of orthologs #2178. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 T.rubrum:160

P0CQ12              	100.00%		F2SGV9              	100.00%
Bootstrap support for P0CQ12 as seed ortholog is 100%.
Bootstrap support for F2SGV9 as seed ortholog is 100%.

Group of orthologs #2179. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 T.rubrum:160

Q5KKH3              	100.00%		F2SDH6              	100.00%
Bootstrap support for Q5KKH3 as seed ortholog is 100%.
Bootstrap support for F2SDH6 as seed ortholog is 100%.

Group of orthologs #2180. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 T.rubrum:160

Q5KFF7              	100.00%		F2SIY9              	100.00%
Bootstrap support for Q5KFF7 as seed ortholog is 100%.
Bootstrap support for F2SIY9 as seed ortholog is 100%.

Group of orthologs #2181. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 T.rubrum:160

Q5KFN4              	100.00%		F2SJA6              	100.00%
Bootstrap support for Q5KFN4 as seed ortholog is 100%.
Bootstrap support for F2SJA6 as seed ortholog is 100%.

Group of orthologs #2182. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 T.rubrum:160

Q5KCK4              	100.00%		F2SMQ6              	100.00%
Bootstrap support for Q5KCK4 as seed ortholog is 100%.
Bootstrap support for F2SMQ6 as seed ortholog is 100%.

Group of orthologs #2183. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 T.rubrum:160

Q5KFS3              	100.00%		F2SM09              	100.00%
Bootstrap support for Q5KFS3 as seed ortholog is 100%.
Bootstrap support for F2SM09 as seed ortholog is 100%.

Group of orthologs #2184. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 T.rubrum:160

Q5KG33              	100.00%		F2SPC9              	100.00%
Bootstrap support for Q5KG33 as seed ortholog is 100%.
Bootstrap support for F2SPC9 as seed ortholog is 100%.

Group of orthologs #2185. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 T.rubrum:160

Q5KGQ8              	100.00%		F2SNX0              	100.00%
Bootstrap support for Q5KGQ8 as seed ortholog is 100%.
Bootstrap support for F2SNX0 as seed ortholog is 100%.

Group of orthologs #2186. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 T.rubrum:82

Q5KG76              	100.00%		F2SZN1              	100.00%
Bootstrap support for Q5KG76 as seed ortholog is 100%.
Bootstrap support for F2SZN1 as seed ortholog is 96%.

Group of orthologs #2187. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:104 T.rubrum:160

Q5KFU2              	100.00%		F2T163              	100.00%
Bootstrap support for Q5KFU2 as seed ortholog is 99%.
Bootstrap support for F2T163 as seed ortholog is 100%.

Group of orthologs #2188. Best score 160 bits
Score difference with first non-orthologous sequence - C.neoformans:160 T.rubrum:160

Q5KN51              	100.00%		F2SXY7              	100.00%
Bootstrap support for Q5KN51 as seed ortholog is 100%.
Bootstrap support for F2SXY7 as seed ortholog is 100%.

Group of orthologs #2189. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 T.rubrum:159

Q5KA83              	100.00%		F2SEG6              	100.00%
Bootstrap support for Q5KA83 as seed ortholog is 100%.
Bootstrap support for F2SEG6 as seed ortholog is 100%.

Group of orthologs #2190. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 T.rubrum:159

Q5KDK9              	100.00%		F2SBR5              	100.00%
Bootstrap support for Q5KDK9 as seed ortholog is 100%.
Bootstrap support for F2SBR5 as seed ortholog is 100%.

Group of orthologs #2191. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 T.rubrum:159

P0CQ68              	100.00%		F2SJT1              	100.00%
Bootstrap support for P0CQ68 as seed ortholog is 100%.
Bootstrap support for F2SJT1 as seed ortholog is 100%.

Group of orthologs #2192. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubrum:21

Q5K8L2              	100.00%		F2SLN0              	100.00%
Bootstrap support for Q5K8L2 as seed ortholog is 99%.
Bootstrap support for F2SLN0 as seed ortholog is 67%.
Alternative seed ortholog is F2SBS7 (21 bits away from this cluster)

Group of orthologs #2193. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 T.rubrum:159

Q5KN80              	100.00%		F2SDY4              	100.00%
Bootstrap support for Q5KN80 as seed ortholog is 100%.
Bootstrap support for F2SDY4 as seed ortholog is 100%.

Group of orthologs #2194. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 T.rubrum:159

Q5KA59              	100.00%		F2SW38              	100.00%
Bootstrap support for Q5KA59 as seed ortholog is 100%.
Bootstrap support for F2SW38 as seed ortholog is 100%.

Group of orthologs #2195. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 T.rubrum:159

Q5KGD0              	100.00%		F2SX77              	100.00%
Bootstrap support for Q5KGD0 as seed ortholog is 100%.
Bootstrap support for F2SX77 as seed ortholog is 100%.

Group of orthologs #2196. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 T.rubrum:5

Q5KH65              	100.00%		F2SZ79              	100.00%
Bootstrap support for Q5KH65 as seed ortholog is 100%.
Bootstrap support for F2SZ79 as seed ortholog is 52%.
Alternative seed ortholog is F2SNT8 (5 bits away from this cluster)

Group of orthologs #2197. Best score 159 bits
Score difference with first non-orthologous sequence - C.neoformans:159 T.rubrum:159

Q5KMJ1              	100.00%		F2SYF9              	100.00%
Bootstrap support for Q5KMJ1 as seed ortholog is 100%.
Bootstrap support for F2SYF9 as seed ortholog is 100%.

Group of orthologs #2198. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubrum:54

Q5K7F7              	100.00%		F2SLT8              	100.00%
Q5KKA1              	55.27%		
Q5KKA2              	43.66%		
Bootstrap support for Q5K7F7 as seed ortholog is 98%.
Bootstrap support for F2SLT8 as seed ortholog is 93%.

Group of orthologs #2199. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubrum:158

Q5KJD6              	100.00%		F2SK89              	100.00%
Q5KJA5              	25.85%		
Q5K8F0              	23.81%		
Bootstrap support for Q5KJD6 as seed ortholog is 100%.
Bootstrap support for F2SK89 as seed ortholog is 100%.

Group of orthologs #2200. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubrum:158

P0CR54              	100.00%		F2SDU8              	100.00%
Bootstrap support for P0CR54 as seed ortholog is 100%.
Bootstrap support for F2SDU8 as seed ortholog is 100%.

Group of orthologs #2201. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubrum:158

P0CN70              	100.00%		F2SKT9              	100.00%
Bootstrap support for P0CN70 as seed ortholog is 100%.
Bootstrap support for F2SKT9 as seed ortholog is 100%.

Group of orthologs #2202. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubrum:158

Q5KC60              	100.00%		F2SJT3              	100.00%
Bootstrap support for Q5KC60 as seed ortholog is 100%.
Bootstrap support for F2SJT3 as seed ortholog is 100%.

Group of orthologs #2203. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubrum:158

P0CR58              	100.00%		F2SS20              	100.00%
Bootstrap support for P0CR58 as seed ortholog is 100%.
Bootstrap support for F2SS20 as seed ortholog is 100%.

Group of orthologs #2204. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubrum:158

Q5KIS8              	100.00%		F2SK51              	100.00%
Bootstrap support for Q5KIS8 as seed ortholog is 100%.
Bootstrap support for F2SK51 as seed ortholog is 100%.

Group of orthologs #2205. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubrum:158

Q5KK17              	100.00%		F2SJK4              	100.00%
Bootstrap support for Q5KK17 as seed ortholog is 100%.
Bootstrap support for F2SJK4 as seed ortholog is 100%.

Group of orthologs #2206. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubrum:158

P0CO96              	100.00%		F2SYD0              	100.00%
Bootstrap support for P0CO96 as seed ortholog is 100%.
Bootstrap support for F2SYD0 as seed ortholog is 100%.

Group of orthologs #2207. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubrum:158

Q5KGW9              	100.00%		F2SPA4              	100.00%
Bootstrap support for Q5KGW9 as seed ortholog is 100%.
Bootstrap support for F2SPA4 as seed ortholog is 100%.

Group of orthologs #2208. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:70 T.rubrum:158

Q5KI52              	100.00%		F2SPS8              	100.00%
Bootstrap support for Q5KI52 as seed ortholog is 98%.
Bootstrap support for F2SPS8 as seed ortholog is 100%.

Group of orthologs #2209. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubrum:158

Q5K8W3              	100.00%		F2SZC2              	100.00%
Bootstrap support for Q5K8W3 as seed ortholog is 100%.
Bootstrap support for F2SZC2 as seed ortholog is 100%.

Group of orthologs #2210. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubrum:158

Q5KMD5              	100.00%		F2SP28              	100.00%
Bootstrap support for Q5KMD5 as seed ortholog is 100%.
Bootstrap support for F2SP28 as seed ortholog is 100%.

Group of orthologs #2211. Best score 158 bits
Score difference with first non-orthologous sequence - C.neoformans:158 T.rubrum:158

Q5KM60              	100.00%		F2T108              	100.00%
Bootstrap support for Q5KM60 as seed ortholog is 100%.
Bootstrap support for F2T108 as seed ortholog is 100%.

Group of orthologs #2212. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:98 T.rubrum:79

Q5KGT0              	100.00%		F2SIG6              	100.00%
Q5K977              	44.97%		F2T1C6              	27.24%
                    	       		F2SC66              	24.04%
Bootstrap support for Q5KGT0 as seed ortholog is 99%.
Bootstrap support for F2SIG6 as seed ortholog is 95%.

Group of orthologs #2213. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:82 T.rubrum:25

Q5KEU0              	100.00%		F2SCY0              	100.00%
Bootstrap support for Q5KEU0 as seed ortholog is 99%.
Bootstrap support for F2SCY0 as seed ortholog is 81%.

Group of orthologs #2214. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 T.rubrum:157

P0CM76              	100.00%		F2SR76              	100.00%
Bootstrap support for P0CM76 as seed ortholog is 100%.
Bootstrap support for F2SR76 as seed ortholog is 100%.

Group of orthologs #2215. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 T.rubrum:157

Q5KB24              	100.00%		F2SLT7              	100.00%
Bootstrap support for Q5KB24 as seed ortholog is 100%.
Bootstrap support for F2SLT7 as seed ortholog is 100%.

Group of orthologs #2216. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 T.rubrum:157

Q5K8J8              	100.00%		F2SPW5              	100.00%
Bootstrap support for Q5K8J8 as seed ortholog is 100%.
Bootstrap support for F2SPW5 as seed ortholog is 100%.

Group of orthologs #2217. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 T.rubrum:157

P0CO56              	100.00%		F2SY11              	100.00%
Bootstrap support for P0CO56 as seed ortholog is 100%.
Bootstrap support for F2SY11 as seed ortholog is 100%.

Group of orthologs #2218. Best score 157 bits
Score difference with first non-orthologous sequence - C.neoformans:157 T.rubrum:157

Q5KI44              	100.00%		F2SX06              	100.00%
Bootstrap support for Q5KI44 as seed ortholog is 100%.
Bootstrap support for F2SX06 as seed ortholog is 100%.

Group of orthologs #2219. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 T.rubrum:156

P0CS54              	100.00%		F2SGT9              	100.00%
Bootstrap support for P0CS54 as seed ortholog is 100%.
Bootstrap support for F2SGT9 as seed ortholog is 100%.

Group of orthologs #2220. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 T.rubrum:156

Q5K6Y6              	100.00%		F2SKL5              	100.00%
Bootstrap support for Q5K6Y6 as seed ortholog is 100%.
Bootstrap support for F2SKL5 as seed ortholog is 100%.

Group of orthologs #2221. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:60 T.rubrum:17

Q5KA37              	100.00%		F2SP94              	100.00%
Bootstrap support for Q5KA37 as seed ortholog is 93%.
Bootstrap support for F2SP94 as seed ortholog is 66%.
Alternative seed ortholog is F2SCN4 (17 bits away from this cluster)

Group of orthologs #2222. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 T.rubrum:156

Q5K7D5              	100.00%		F2SV47              	100.00%
Bootstrap support for Q5K7D5 as seed ortholog is 100%.
Bootstrap support for F2SV47 as seed ortholog is 100%.

Group of orthologs #2223. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 T.rubrum:156

Q5K7H9              	100.00%		F2SVG9              	100.00%
Bootstrap support for Q5K7H9 as seed ortholog is 100%.
Bootstrap support for F2SVG9 as seed ortholog is 100%.

Group of orthologs #2224. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 T.rubrum:156

Q5KIE6              	100.00%		F2SN07              	100.00%
Bootstrap support for Q5KIE6 as seed ortholog is 100%.
Bootstrap support for F2SN07 as seed ortholog is 100%.

Group of orthologs #2225. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 T.rubrum:156

Q5KDD8              	100.00%		F2SUE1              	100.00%
Bootstrap support for Q5KDD8 as seed ortholog is 100%.
Bootstrap support for F2SUE1 as seed ortholog is 100%.

Group of orthologs #2226. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 T.rubrum:156

Q5KM54              	100.00%		F2SUY6              	100.00%
Bootstrap support for Q5KM54 as seed ortholog is 100%.
Bootstrap support for F2SUY6 as seed ortholog is 100%.

Group of orthologs #2227. Best score 156 bits
Score difference with first non-orthologous sequence - C.neoformans:156 T.rubrum:156

Q5KPB1              	100.00%		F2STU9              	100.00%
Bootstrap support for Q5KPB1 as seed ortholog is 100%.
Bootstrap support for F2STU9 as seed ortholog is 100%.

Group of orthologs #2228. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 T.rubrum:52

Q5KCA8              	100.00%		F2SF46              	100.00%
Bootstrap support for Q5KCA8 as seed ortholog is 100%.
Bootstrap support for F2SF46 as seed ortholog is 95%.

Group of orthologs #2229. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 T.rubrum:155

Q5KC58              	100.00%		F2SH74              	100.00%
Bootstrap support for Q5KC58 as seed ortholog is 100%.
Bootstrap support for F2SH74 as seed ortholog is 100%.

Group of orthologs #2230. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 T.rubrum:155

Q5KIJ6              	100.00%		F2SDY1              	100.00%
Bootstrap support for Q5KIJ6 as seed ortholog is 100%.
Bootstrap support for F2SDY1 as seed ortholog is 100%.

Group of orthologs #2231. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 T.rubrum:155

Q5KKW8              	100.00%		F2SE00              	100.00%
Bootstrap support for Q5KKW8 as seed ortholog is 100%.
Bootstrap support for F2SE00 as seed ortholog is 100%.

Group of orthologs #2232. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 T.rubrum:98

Q5KLA4              	100.00%		F2SFC3              	100.00%
Bootstrap support for Q5KLA4 as seed ortholog is 100%.
Bootstrap support for F2SFC3 as seed ortholog is 99%.

Group of orthologs #2233. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 T.rubrum:155

Q5KF47              	100.00%		F2SND8              	100.00%
Bootstrap support for Q5KF47 as seed ortholog is 100%.
Bootstrap support for F2SND8 as seed ortholog is 100%.

Group of orthologs #2234. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 T.rubrum:155

Q5KKE8              	100.00%		F2SK74              	100.00%
Bootstrap support for Q5KKE8 as seed ortholog is 100%.
Bootstrap support for F2SK74 as seed ortholog is 100%.

Group of orthologs #2235. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 T.rubrum:155

Q5KCA1              	100.00%		F2STU0              	100.00%
Bootstrap support for Q5KCA1 as seed ortholog is 100%.
Bootstrap support for F2STU0 as seed ortholog is 100%.

Group of orthologs #2236. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 T.rubrum:155

Q5KMX2              	100.00%		F2SJW5              	100.00%
Bootstrap support for Q5KMX2 as seed ortholog is 100%.
Bootstrap support for F2SJW5 as seed ortholog is 100%.

Group of orthologs #2237. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 T.rubrum:155

Q5KAK3              	100.00%		F2SXZ5              	100.00%
Bootstrap support for Q5KAK3 as seed ortholog is 100%.
Bootstrap support for F2SXZ5 as seed ortholog is 100%.

Group of orthologs #2238. Best score 155 bits
Score difference with first non-orthologous sequence - C.neoformans:155 T.rubrum:155

Q5KLB3              	100.00%		F2SP69              	100.00%
Bootstrap support for Q5KLB3 as seed ortholog is 100%.
Bootstrap support for F2SP69 as seed ortholog is 100%.

Group of orthologs #2239. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 T.rubrum:25

Q5KF52              	100.00%		F2STN9              	100.00%
Q5KD83              	32.97%		
Q5KAD0              	30.54%		
Bootstrap support for Q5KF52 as seed ortholog is 100%.
Bootstrap support for F2STN9 as seed ortholog is 80%.

Group of orthologs #2240. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 T.rubrum:154

P0CR80              	100.00%		F2SJC2              	100.00%
Bootstrap support for P0CR80 as seed ortholog is 100%.
Bootstrap support for F2SJC2 as seed ortholog is 100%.

Group of orthologs #2241. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 T.rubrum:154

Q5KN92              	100.00%		F2SCS7              	100.00%
Bootstrap support for Q5KN92 as seed ortholog is 100%.
Bootstrap support for F2SCS7 as seed ortholog is 100%.

Group of orthologs #2242. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 T.rubrum:154

Q5K865              	100.00%		F2SRW9              	100.00%
Bootstrap support for Q5K865 as seed ortholog is 100%.
Bootstrap support for F2SRW9 as seed ortholog is 100%.

Group of orthologs #2243. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 T.rubrum:154

Q5KM88              	100.00%		F2SEK9              	100.00%
Bootstrap support for Q5KM88 as seed ortholog is 100%.
Bootstrap support for F2SEK9 as seed ortholog is 100%.

Group of orthologs #2244. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:83 T.rubrum:154

Q5KDS6              	100.00%		F2SP44              	100.00%
Bootstrap support for Q5KDS6 as seed ortholog is 94%.
Bootstrap support for F2SP44 as seed ortholog is 100%.

Group of orthologs #2245. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 T.rubrum:154

Q5KCI2              	100.00%		F2SRA1              	100.00%
Bootstrap support for Q5KCI2 as seed ortholog is 100%.
Bootstrap support for F2SRA1 as seed ortholog is 100%.

Group of orthologs #2246. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 T.rubrum:154

Q5KIA1              	100.00%		F2STS5              	100.00%
Bootstrap support for Q5KIA1 as seed ortholog is 100%.
Bootstrap support for F2STS5 as seed ortholog is 100%.

Group of orthologs #2247. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 T.rubrum:154

Q5KKF3              	100.00%		F2STR6              	100.00%
Bootstrap support for Q5KKF3 as seed ortholog is 100%.
Bootstrap support for F2STR6 as seed ortholog is 100%.

Group of orthologs #2248. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 T.rubrum:154

Q5KPS3              	100.00%		F2SU27              	100.00%
Bootstrap support for Q5KPS3 as seed ortholog is 100%.
Bootstrap support for F2SU27 as seed ortholog is 100%.

Group of orthologs #2249. Best score 154 bits
Score difference with first non-orthologous sequence - C.neoformans:154 T.rubrum:154

Q5KIZ3              	100.00%		F2SZG0              	100.00%
Bootstrap support for Q5KIZ3 as seed ortholog is 100%.
Bootstrap support for F2SZG0 as seed ortholog is 100%.

Group of orthologs #2250. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 T.rubrum:153

Q5K9K5              	100.00%		F2SEN8              	100.00%
Bootstrap support for Q5K9K5 as seed ortholog is 100%.
Bootstrap support for F2SEN8 as seed ortholog is 100%.

Group of orthologs #2251. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 T.rubrum:153

Q5KFS7              	100.00%		F2SF06              	100.00%
Bootstrap support for Q5KFS7 as seed ortholog is 100%.
Bootstrap support for F2SF06 as seed ortholog is 100%.

Group of orthologs #2252. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 T.rubrum:153

Q5K802              	100.00%		F2SQ37              	100.00%
Bootstrap support for Q5K802 as seed ortholog is 100%.
Bootstrap support for F2SQ37 as seed ortholog is 100%.

Group of orthologs #2253. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 T.rubrum:153

Q5KCV9              	100.00%		F2SNE6              	100.00%
Bootstrap support for Q5KCV9 as seed ortholog is 100%.
Bootstrap support for F2SNE6 as seed ortholog is 100%.

Group of orthologs #2254. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 T.rubrum:90

Q5K9G6              	100.00%		F2SRJ8              	100.00%
Bootstrap support for Q5K9G6 as seed ortholog is 100%.
Bootstrap support for F2SRJ8 as seed ortholog is 99%.

Group of orthologs #2255. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 T.rubrum:153

Q5KC52              	100.00%		F2ST19              	100.00%
Bootstrap support for Q5KC52 as seed ortholog is 100%.
Bootstrap support for F2ST19 as seed ortholog is 100%.

Group of orthologs #2256. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 T.rubrum:153

Q5K9S4              	100.00%		F2SX51              	100.00%
Bootstrap support for Q5K9S4 as seed ortholog is 100%.
Bootstrap support for F2SX51 as seed ortholog is 100%.

Group of orthologs #2257. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 T.rubrum:153

Q5KBR3              	100.00%		F2SVQ9              	100.00%
Bootstrap support for Q5KBR3 as seed ortholog is 100%.
Bootstrap support for F2SVQ9 as seed ortholog is 100%.

Group of orthologs #2258. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:71 T.rubrum:153

Q5K9P7              	100.00%		F2SZB9              	100.00%
Bootstrap support for Q5K9P7 as seed ortholog is 90%.
Bootstrap support for F2SZB9 as seed ortholog is 100%.

Group of orthologs #2259. Best score 153 bits
Score difference with first non-orthologous sequence - C.neoformans:153 T.rubrum:153

Q5KHV8              	100.00%		F2SYC9              	100.00%
Bootstrap support for Q5KHV8 as seed ortholog is 100%.
Bootstrap support for F2SYC9 as seed ortholog is 100%.

Group of orthologs #2260. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 T.rubrum:152

Q5K9E2              	100.00%		F2SCR7              	100.00%
Bootstrap support for Q5K9E2 as seed ortholog is 100%.
Bootstrap support for F2SCR7 as seed ortholog is 100%.

Group of orthologs #2261. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:107 T.rubrum:152

Q5K8W8              	100.00%		F2SVJ9              	100.00%
Bootstrap support for Q5K8W8 as seed ortholog is 96%.
Bootstrap support for F2SVJ9 as seed ortholog is 100%.

Group of orthologs #2262. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:152 T.rubrum:152

Q5KBT7              	100.00%		F2SSY8              	100.00%
Bootstrap support for Q5KBT7 as seed ortholog is 100%.
Bootstrap support for F2SSY8 as seed ortholog is 100%.

Group of orthologs #2263. Best score 152 bits
Score difference with first non-orthologous sequence - C.neoformans:90 T.rubrum:152

Q5KM35              	100.00%		F2SQ31              	100.00%
Bootstrap support for Q5KM35 as seed ortholog is 99%.
Bootstrap support for F2SQ31 as seed ortholog is 100%.

Group of orthologs #2264. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 T.rubrum:151

P0CP72              	100.00%		F2SC84              	100.00%
Bootstrap support for P0CP72 as seed ortholog is 100%.
Bootstrap support for F2SC84 as seed ortholog is 100%.

Group of orthologs #2265. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 T.rubrum:151

P0CN72              	100.00%		F2SD85              	100.00%
Bootstrap support for P0CN72 as seed ortholog is 100%.
Bootstrap support for F2SD85 as seed ortholog is 100%.

Group of orthologs #2266. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 T.rubrum:151

Q5K7Q0              	100.00%		F2SEQ3              	100.00%
Bootstrap support for Q5K7Q0 as seed ortholog is 100%.
Bootstrap support for F2SEQ3 as seed ortholog is 100%.

Group of orthologs #2267. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubrum:151

Q5KAP9              	100.00%		F2SCF4              	100.00%
Bootstrap support for Q5KAP9 as seed ortholog is 99%.
Bootstrap support for F2SCF4 as seed ortholog is 100%.

Group of orthologs #2268. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 T.rubrum:97

Q5K8G5              	100.00%		F2SG99              	100.00%
Bootstrap support for Q5K8G5 as seed ortholog is 100%.
Bootstrap support for F2SG99 as seed ortholog is 99%.

Group of orthologs #2269. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 T.rubrum:151

P0CP38              	100.00%		F2SK60              	100.00%
Bootstrap support for P0CP38 as seed ortholog is 100%.
Bootstrap support for F2SK60 as seed ortholog is 100%.

Group of orthologs #2270. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 T.rubrum:151

Q5KCV8              	100.00%		F2SF65              	100.00%
Bootstrap support for Q5KCV8 as seed ortholog is 100%.
Bootstrap support for F2SF65 as seed ortholog is 100%.

Group of orthologs #2271. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 T.rubrum:151

Q5KFI3              	100.00%		F2SFC5              	100.00%
Bootstrap support for Q5KFI3 as seed ortholog is 100%.
Bootstrap support for F2SFC5 as seed ortholog is 100%.

Group of orthologs #2272. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 T.rubrum:151

Q5KL74              	100.00%		F2SC12              	100.00%
Bootstrap support for Q5KL74 as seed ortholog is 100%.
Bootstrap support for F2SC12 as seed ortholog is 100%.

Group of orthologs #2273. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 T.rubrum:151

Q5KFN9              	100.00%		F2SNU2              	100.00%
Bootstrap support for Q5KFN9 as seed ortholog is 100%.
Bootstrap support for F2SNU2 as seed ortholog is 100%.

Group of orthologs #2274. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 T.rubrum:151

Q5KMC4              	100.00%		F2SI50              	100.00%
Bootstrap support for Q5KMC4 as seed ortholog is 100%.
Bootstrap support for F2SI50 as seed ortholog is 100%.

Group of orthologs #2275. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 T.rubrum:151

Q5KGK7              	100.00%		F2SRT4              	100.00%
Bootstrap support for Q5KGK7 as seed ortholog is 100%.
Bootstrap support for F2SRT4 as seed ortholog is 100%.

Group of orthologs #2276. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 T.rubrum:151

Q5K9W6              	100.00%		F2T0B6              	100.00%
Bootstrap support for Q5K9W6 as seed ortholog is 100%.
Bootstrap support for F2T0B6 as seed ortholog is 100%.

Group of orthologs #2277. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 T.rubrum:151

Q5K9M5              	100.00%		F2T0S7              	100.00%
Bootstrap support for Q5K9M5 as seed ortholog is 100%.
Bootstrap support for F2T0S7 as seed ortholog is 100%.

Group of orthologs #2278. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 T.rubrum:151

Q5KPP2              	100.00%		F2SUK2              	100.00%
Bootstrap support for Q5KPP2 as seed ortholog is 100%.
Bootstrap support for F2SUK2 as seed ortholog is 100%.

Group of orthologs #2279. Best score 151 bits
Score difference with first non-orthologous sequence - C.neoformans:151 T.rubrum:151

Q5KM44              	100.00%		F2T0W7              	100.00%
Bootstrap support for Q5KM44 as seed ortholog is 100%.
Bootstrap support for F2T0W7 as seed ortholog is 100%.

Group of orthologs #2280. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 T.rubrum:84

P0CL94              	100.00%		F2SBU6              	100.00%
Bootstrap support for P0CL94 as seed ortholog is 100%.
Bootstrap support for F2SBU6 as seed ortholog is 99%.

Group of orthologs #2281. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 T.rubrum:150

Q5KJ39              	100.00%		F2SC13              	100.00%
Bootstrap support for Q5KJ39 as seed ortholog is 100%.
Bootstrap support for F2SC13 as seed ortholog is 100%.

Group of orthologs #2282. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:58 T.rubrum:150

P0CS68              	100.00%		F2SSU4              	100.00%
Bootstrap support for P0CS68 as seed ortholog is 88%.
Bootstrap support for F2SSU4 as seed ortholog is 100%.

Group of orthologs #2283. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 T.rubrum:150

Q5KLM7              	100.00%		F2SNX6              	100.00%
Bootstrap support for Q5KLM7 as seed ortholog is 100%.
Bootstrap support for F2SNX6 as seed ortholog is 100%.

Group of orthologs #2284. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 T.rubrum:150

Q5KI23              	100.00%		F2SU76              	100.00%
Bootstrap support for Q5KI23 as seed ortholog is 100%.
Bootstrap support for F2SU76 as seed ortholog is 100%.

Group of orthologs #2285. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 T.rubrum:150

Q5KAG6              	100.00%		F2T157              	100.00%
Bootstrap support for Q5KAG6 as seed ortholog is 100%.
Bootstrap support for F2T157 as seed ortholog is 100%.

Group of orthologs #2286. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 T.rubrum:150

Q5KEK7              	100.00%		F2SYS5              	100.00%
Bootstrap support for Q5KEK7 as seed ortholog is 100%.
Bootstrap support for F2SYS5 as seed ortholog is 100%.

Group of orthologs #2287. Best score 150 bits
Score difference with first non-orthologous sequence - C.neoformans:150 T.rubrum:150

Q5KGU9              	100.00%		F2SZX7              	100.00%
Bootstrap support for Q5KGU9 as seed ortholog is 100%.
Bootstrap support for F2SZX7 as seed ortholog is 100%.

Group of orthologs #2288. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 T.rubrum:149

Q5KBM9              	100.00%		F2SQB4              	100.00%
Bootstrap support for Q5KBM9 as seed ortholog is 100%.
Bootstrap support for F2SQB4 as seed ortholog is 100%.

Group of orthologs #2289. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 T.rubrum:149

Q5K7U3              	100.00%		F2SVN2              	100.00%
Bootstrap support for Q5K7U3 as seed ortholog is 100%.
Bootstrap support for F2SVN2 as seed ortholog is 100%.

Group of orthologs #2290. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 T.rubrum:149

Q5KGS2              	100.00%		F2SQH4              	100.00%
Bootstrap support for Q5KGS2 as seed ortholog is 100%.
Bootstrap support for F2SQH4 as seed ortholog is 100%.

Group of orthologs #2291. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 T.rubrum:149

Q5KK61              	100.00%		F2SUI0              	100.00%
Bootstrap support for Q5KK61 as seed ortholog is 100%.
Bootstrap support for F2SUI0 as seed ortholog is 100%.

Group of orthologs #2292. Best score 149 bits
Score difference with first non-orthologous sequence - C.neoformans:149 T.rubrum:149

Q5KJH6              	100.00%		F2SYJ4              	100.00%
Bootstrap support for Q5KJH6 as seed ortholog is 100%.
Bootstrap support for F2SYJ4 as seed ortholog is 100%.

Group of orthologs #2293. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:74 T.rubrum:56

Q5KEJ3              	100.00%		F2SEG8              	100.00%
Q5KMX6              	41.95%		F2SHL4              	20.69%
Bootstrap support for Q5KEJ3 as seed ortholog is 94%.
Bootstrap support for F2SEG8 as seed ortholog is 77%.

Group of orthologs #2294. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:33 T.rubrum:19

Q5KM09              	100.00%		F2SEP5              	100.00%
Q5K9P4              	33.95%		
Bootstrap support for Q5KM09 as seed ortholog is 76%.
Bootstrap support for F2SEP5 as seed ortholog is 83%.

Group of orthologs #2295. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 T.rubrum:148

Q5KBX8              	100.00%		F2SIB1              	100.00%
Bootstrap support for Q5KBX8 as seed ortholog is 100%.
Bootstrap support for F2SIB1 as seed ortholog is 100%.

Group of orthologs #2296. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 T.rubrum:148

Q5KI10              	100.00%		F2SDT6              	100.00%
Bootstrap support for Q5KI10 as seed ortholog is 100%.
Bootstrap support for F2SDT6 as seed ortholog is 100%.

Group of orthologs #2297. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 T.rubrum:148

Q5KAL8              	100.00%		F2SLF4              	100.00%
Bootstrap support for Q5KAL8 as seed ortholog is 100%.
Bootstrap support for F2SLF4 as seed ortholog is 100%.

Group of orthologs #2298. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 T.rubrum:148

P0CM18              	100.00%		F2SS88              	100.00%
Bootstrap support for P0CM18 as seed ortholog is 100%.
Bootstrap support for F2SS88 as seed ortholog is 100%.

Group of orthologs #2299. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 T.rubrum:148

Q5KDQ4              	100.00%		F2SLT5              	100.00%
Bootstrap support for Q5KDQ4 as seed ortholog is 100%.
Bootstrap support for F2SLT5 as seed ortholog is 100%.

Group of orthologs #2300. Best score 148 bits
Score difference with first non-orthologous sequence - C.neoformans:148 T.rubrum:148

Q5K6X4              	100.00%		F2SXW7              	100.00%
Bootstrap support for Q5K6X4 as seed ortholog is 100%.
Bootstrap support for F2SXW7 as seed ortholog is 100%.

Group of orthologs #2301. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 T.rubrum:147

Q5KB67              	100.00%		F2SKL9              	100.00%
                    	       		F2SKM1              	87.67%
Bootstrap support for Q5KB67 as seed ortholog is 100%.
Bootstrap support for F2SKL9 as seed ortholog is 100%.

Group of orthologs #2302. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 T.rubrum:147

Q5K973              	100.00%		F2SBZ3              	100.00%
Bootstrap support for Q5K973 as seed ortholog is 100%.
Bootstrap support for F2SBZ3 as seed ortholog is 100%.

Group of orthologs #2303. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 T.rubrum:147

Q5K6U7              	100.00%		F2SR26              	100.00%
Bootstrap support for Q5K6U7 as seed ortholog is 100%.
Bootstrap support for F2SR26 as seed ortholog is 100%.

Group of orthologs #2304. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 T.rubrum:147

Q5KJG3              	100.00%		F2SIH8              	100.00%
Bootstrap support for Q5KJG3 as seed ortholog is 100%.
Bootstrap support for F2SIH8 as seed ortholog is 100%.

Group of orthologs #2305. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 T.rubrum:147

Q5KKW7              	100.00%		F2SI94              	100.00%
Bootstrap support for Q5KKW7 as seed ortholog is 100%.
Bootstrap support for F2SI94 as seed ortholog is 100%.

Group of orthologs #2306. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 T.rubrum:147

P0CR76              	100.00%		F2SWE1              	100.00%
Bootstrap support for P0CR76 as seed ortholog is 100%.
Bootstrap support for F2SWE1 as seed ortholog is 100%.

Group of orthologs #2307. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 T.rubrum:147

Q5KC05              	100.00%		F2STF4              	100.00%
Bootstrap support for Q5KC05 as seed ortholog is 100%.
Bootstrap support for F2STF4 as seed ortholog is 100%.

Group of orthologs #2308. Best score 147 bits
Score difference with first non-orthologous sequence - C.neoformans:147 T.rubrum:147

Q5KGD6              	100.00%		F2SU29              	100.00%
Bootstrap support for Q5KGD6 as seed ortholog is 100%.
Bootstrap support for F2SU29 as seed ortholog is 100%.

Group of orthologs #2309. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 T.rubrum:146

Q5KDS9              	100.00%		F2SEL8              	100.00%
Bootstrap support for Q5KDS9 as seed ortholog is 100%.
Bootstrap support for F2SEL8 as seed ortholog is 100%.

Group of orthologs #2310. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:22 T.rubrum:146

Q5KFK4              	100.00%		F2SE47              	100.00%
Bootstrap support for Q5KFK4 as seed ortholog is 27%.
Alternative seed ortholog is Q5K953 (22 bits away from this cluster)
Bootstrap support for F2SE47 as seed ortholog is 100%.

Group of orthologs #2311. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 T.rubrum:146

P0CO38              	100.00%		F2SRJ3              	100.00%
Bootstrap support for P0CO38 as seed ortholog is 100%.
Bootstrap support for F2SRJ3 as seed ortholog is 100%.

Group of orthologs #2312. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 T.rubrum:146

Q5KHF1              	100.00%		F2SNR6              	100.00%
Bootstrap support for Q5KHF1 as seed ortholog is 100%.
Bootstrap support for F2SNR6 as seed ortholog is 100%.

Group of orthologs #2313. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 T.rubrum:146

Q5K9I6              	100.00%		F2SWR5              	100.00%
Bootstrap support for Q5K9I6 as seed ortholog is 100%.
Bootstrap support for F2SWR5 as seed ortholog is 100%.

Group of orthologs #2314. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 T.rubrum:146

Q5KK92              	100.00%		F2SN92              	100.00%
Bootstrap support for Q5KK92 as seed ortholog is 100%.
Bootstrap support for F2SN92 as seed ortholog is 100%.

Group of orthologs #2315. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 T.rubrum:146

Q5KIC9              	100.00%		F2SU58              	100.00%
Bootstrap support for Q5KIC9 as seed ortholog is 100%.
Bootstrap support for F2SU58 as seed ortholog is 100%.

Group of orthologs #2316. Best score 146 bits
Score difference with first non-orthologous sequence - C.neoformans:146 T.rubrum:146

Q5KLK6              	100.00%		F2SRY3              	100.00%
Bootstrap support for Q5KLK6 as seed ortholog is 100%.
Bootstrap support for F2SRY3 as seed ortholog is 100%.

Group of orthologs #2317. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 T.rubrum:145

Q5KMX8              	100.00%		F2SN94              	100.00%
Bootstrap support for Q5KMX8 as seed ortholog is 100%.
Bootstrap support for F2SN94 as seed ortholog is 100%.

Group of orthologs #2318. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 T.rubrum:88

Q5KFB0              	100.00%		F2SX40              	100.00%
Bootstrap support for Q5KFB0 as seed ortholog is 100%.
Bootstrap support for F2SX40 as seed ortholog is 84%.

Group of orthologs #2319. Best score 145 bits
Score difference with first non-orthologous sequence - C.neoformans:145 T.rubrum:145

Q5KLG7              	100.00%		F2SV93              	100.00%
Bootstrap support for Q5KLG7 as seed ortholog is 100%.
Bootstrap support for F2SV93 as seed ortholog is 100%.

Group of orthologs #2320. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 T.rubrum:144

Q5KD71              	100.00%		F2SBQ6              	100.00%
Bootstrap support for Q5KD71 as seed ortholog is 100%.
Bootstrap support for F2SBQ6 as seed ortholog is 100%.

Group of orthologs #2321. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 T.rubrum:144

P0CO80              	100.00%		F2SVM3              	100.00%
Bootstrap support for P0CO80 as seed ortholog is 100%.
Bootstrap support for F2SVM3 as seed ortholog is 100%.

Group of orthologs #2322. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 T.rubrum:144

Q5KH59              	100.00%		F2SLA6              	100.00%
Bootstrap support for Q5KH59 as seed ortholog is 100%.
Bootstrap support for F2SLA6 as seed ortholog is 100%.

Group of orthologs #2323. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 T.rubrum:144

Q5KJP3              	100.00%		F2SMR2              	100.00%
Bootstrap support for Q5KJP3 as seed ortholog is 100%.
Bootstrap support for F2SMR2 as seed ortholog is 100%.

Group of orthologs #2324. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:72 T.rubrum:144

Q5KNQ8              	100.00%		F2SL92              	100.00%
Bootstrap support for Q5KNQ8 as seed ortholog is 99%.
Bootstrap support for F2SL92 as seed ortholog is 100%.

Group of orthologs #2325. Best score 144 bits
Score difference with first non-orthologous sequence - C.neoformans:144 T.rubrum:144

Q5KJQ0              	100.00%		F2STG4              	100.00%
Bootstrap support for Q5KJQ0 as seed ortholog is 100%.
Bootstrap support for F2STG4 as seed ortholog is 100%.

Group of orthologs #2326. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:74 T.rubrum:143

Q5KBW4              	100.00%		F2SC52              	100.00%
                    	       		F2SL01              	26.15%
Bootstrap support for Q5KBW4 as seed ortholog is 99%.
Bootstrap support for F2SC52 as seed ortholog is 100%.

Group of orthologs #2327. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 T.rubrum:143

Q5KA95              	100.00%		F2SD47              	100.00%
Bootstrap support for Q5KA95 as seed ortholog is 100%.
Bootstrap support for F2SD47 as seed ortholog is 100%.

Group of orthologs #2328. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 T.rubrum:143

Q5K6U4              	100.00%		F2SR81              	100.00%
Bootstrap support for Q5K6U4 as seed ortholog is 100%.
Bootstrap support for F2SR81 as seed ortholog is 100%.

Group of orthologs #2329. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 T.rubrum:143

Q5KDH7              	100.00%		F2SKF8              	100.00%
Bootstrap support for Q5KDH7 as seed ortholog is 100%.
Bootstrap support for F2SKF8 as seed ortholog is 100%.

Group of orthologs #2330. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 T.rubrum:143

Q5KIZ4              	100.00%		F2SHW7              	100.00%
Bootstrap support for Q5KIZ4 as seed ortholog is 100%.
Bootstrap support for F2SHW7 as seed ortholog is 100%.

Group of orthologs #2331. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 T.rubrum:143

P0CQ62              	100.00%		F2SVM0              	100.00%
Bootstrap support for P0CQ62 as seed ortholog is 100%.
Bootstrap support for F2SVM0 as seed ortholog is 100%.

Group of orthologs #2332. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 T.rubrum:143

Q5KAL4              	100.00%		F2SST1              	100.00%
Bootstrap support for Q5KAL4 as seed ortholog is 100%.
Bootstrap support for F2SST1 as seed ortholog is 100%.

Group of orthologs #2333. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 T.rubrum:143

Q5KP20              	100.00%		F2SHD8              	100.00%
Bootstrap support for Q5KP20 as seed ortholog is 100%.
Bootstrap support for F2SHD8 as seed ortholog is 100%.

Group of orthologs #2334. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 T.rubrum:143

Q5KEJ8              	100.00%		F2SU16              	100.00%
Bootstrap support for Q5KEJ8 as seed ortholog is 100%.
Bootstrap support for F2SU16 as seed ortholog is 100%.

Group of orthologs #2335. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 T.rubrum:143

Q5KD47              	100.00%		F2SWM7              	100.00%
Bootstrap support for Q5KD47 as seed ortholog is 100%.
Bootstrap support for F2SWM7 as seed ortholog is 100%.

Group of orthologs #2336. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 T.rubrum:34

Q5KAF7              	100.00%		F2SZE8              	100.00%
Bootstrap support for Q5KAF7 as seed ortholog is 100%.
Bootstrap support for F2SZE8 as seed ortholog is 91%.

Group of orthologs #2337. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:40 T.rubrum:54

Q5KFL2              	100.00%		F2SV13              	100.00%
Bootstrap support for Q5KFL2 as seed ortholog is 85%.
Bootstrap support for F2SV13 as seed ortholog is 95%.

Group of orthologs #2338. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 T.rubrum:143

Q5KN25              	100.00%		F2SUS0              	100.00%
Bootstrap support for Q5KN25 as seed ortholog is 100%.
Bootstrap support for F2SUS0 as seed ortholog is 100%.

Group of orthologs #2339. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 T.rubrum:90

Q5KPB0              	100.00%		F2SVF2              	100.00%
Bootstrap support for Q5KPB0 as seed ortholog is 100%.
Bootstrap support for F2SVF2 as seed ortholog is 99%.

Group of orthologs #2340. Best score 143 bits
Score difference with first non-orthologous sequence - C.neoformans:143 T.rubrum:143

Q5KPC7              	100.00%		F2SWZ8              	100.00%
Bootstrap support for Q5KPC7 as seed ortholog is 100%.
Bootstrap support for F2SWZ8 as seed ortholog is 100%.

Group of orthologs #2341. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 T.rubrum:142

Q5KFL6              	100.00%		F2SIK8              	100.00%
Bootstrap support for Q5KFL6 as seed ortholog is 100%.
Bootstrap support for F2SIK8 as seed ortholog is 100%.

Group of orthologs #2342. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 T.rubrum:142

Q5KF78              	100.00%		F2SJJ6              	100.00%
Bootstrap support for Q5KF78 as seed ortholog is 100%.
Bootstrap support for F2SJJ6 as seed ortholog is 100%.

Group of orthologs #2343. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 T.rubrum:142

P0CS58              	100.00%		F2SYJ1              	100.00%
Bootstrap support for P0CS58 as seed ortholog is 100%.
Bootstrap support for F2SYJ1 as seed ortholog is 100%.

Group of orthologs #2344. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 T.rubrum:142

Q5K8G0              	100.00%		F2SYL4              	100.00%
Bootstrap support for Q5K8G0 as seed ortholog is 100%.
Bootstrap support for F2SYL4 as seed ortholog is 100%.

Group of orthologs #2345. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 T.rubrum:142

Q5KMZ4              	100.00%		F2SRG8              	100.00%
Bootstrap support for Q5KMZ4 as seed ortholog is 100%.
Bootstrap support for F2SRG8 as seed ortholog is 100%.

Group of orthologs #2346. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:16 T.rubrum:22

Q5KKK2              	100.00%		F2SU40              	100.00%
Bootstrap support for Q5KKK2 as seed ortholog is 65%.
Alternative seed ortholog is Q5KHM4 (16 bits away from this cluster)
Bootstrap support for F2SU40 as seed ortholog is 68%.
Alternative seed ortholog is F2SI75 (22 bits away from this cluster)

Group of orthologs #2347. Best score 142 bits
Score difference with first non-orthologous sequence - C.neoformans:142 T.rubrum:142

Q5KM71              	100.00%		F2SYP2              	100.00%
Bootstrap support for Q5KM71 as seed ortholog is 100%.
Bootstrap support for F2SYP2 as seed ortholog is 100%.

Group of orthologs #2348. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 T.rubrum:141

Q5K7V2              	100.00%		F2SFE5              	100.00%
Bootstrap support for Q5K7V2 as seed ortholog is 100%.
Bootstrap support for F2SFE5 as seed ortholog is 100%.

Group of orthologs #2349. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 T.rubrum:141

Q5K8N6              	100.00%		F2SK46              	100.00%
Bootstrap support for Q5K8N6 as seed ortholog is 100%.
Bootstrap support for F2SK46 as seed ortholog is 100%.

Group of orthologs #2350. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 T.rubrum:141

P0CN80              	100.00%		F2SNP2              	100.00%
Bootstrap support for P0CN80 as seed ortholog is 100%.
Bootstrap support for F2SNP2 as seed ortholog is 100%.

Group of orthologs #2351. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 T.rubrum:141

P0CM52              	100.00%		F2SSD1              	100.00%
Bootstrap support for P0CM52 as seed ortholog is 100%.
Bootstrap support for F2SSD1 as seed ortholog is 100%.

Group of orthologs #2352. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 T.rubrum:141

Q5KGC3              	100.00%		F2SJH0              	100.00%
Bootstrap support for Q5KGC3 as seed ortholog is 100%.
Bootstrap support for F2SJH0 as seed ortholog is 100%.

Group of orthologs #2353. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 T.rubrum:141

Q5KIE2              	100.00%		F2SKB9              	100.00%
Bootstrap support for Q5KIE2 as seed ortholog is 100%.
Bootstrap support for F2SKB9 as seed ortholog is 100%.

Group of orthologs #2354. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 T.rubrum:141

Q5KDT1              	100.00%		F2SRM3              	100.00%
Bootstrap support for Q5KDT1 as seed ortholog is 100%.
Bootstrap support for F2SRM3 as seed ortholog is 100%.

Group of orthologs #2355. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 T.rubrum:141

Q5KMR1              	100.00%		F2SWR9              	100.00%
Bootstrap support for Q5KMR1 as seed ortholog is 100%.
Bootstrap support for F2SWR9 as seed ortholog is 100%.

Group of orthologs #2356. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 T.rubrum:141

Q5KLZ6              	100.00%		F2SZ30              	100.00%
Bootstrap support for Q5KLZ6 as seed ortholog is 100%.
Bootstrap support for F2SZ30 as seed ortholog is 100%.

Group of orthologs #2357. Best score 141 bits
Score difference with first non-orthologous sequence - C.neoformans:141 T.rubrum:141

Q5KNG8              	100.00%		F2SZY5              	100.00%
Bootstrap support for Q5KNG8 as seed ortholog is 100%.
Bootstrap support for F2SZY5 as seed ortholog is 100%.

Group of orthologs #2358. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 T.rubrum:140

Q5K9N0              	100.00%		F2SK70              	100.00%
Bootstrap support for Q5K9N0 as seed ortholog is 100%.
Bootstrap support for F2SK70 as seed ortholog is 100%.

Group of orthologs #2359. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 T.rubrum:140

Q5KE60              	100.00%		F2SHX6              	100.00%
Bootstrap support for Q5KE60 as seed ortholog is 100%.
Bootstrap support for F2SHX6 as seed ortholog is 100%.

Group of orthologs #2360. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 T.rubrum:140

Q5K7B2              	100.00%		F2SRG7              	100.00%
Bootstrap support for Q5K7B2 as seed ortholog is 100%.
Bootstrap support for F2SRG7 as seed ortholog is 100%.

Group of orthologs #2361. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:58 T.rubrum:140

Q5KDL1              	100.00%		F2SV73              	100.00%
Bootstrap support for Q5KDL1 as seed ortholog is 90%.
Bootstrap support for F2SV73 as seed ortholog is 100%.

Group of orthologs #2362. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 T.rubrum:140

Q5KPA4              	100.00%		F2SMS2              	100.00%
Bootstrap support for Q5KPA4 as seed ortholog is 100%.
Bootstrap support for F2SMS2 as seed ortholog is 100%.

Group of orthologs #2363. Best score 140 bits
Score difference with first non-orthologous sequence - C.neoformans:140 T.rubrum:140

Q5KPH1              	100.00%		F2SNT7              	100.00%
Bootstrap support for Q5KPH1 as seed ortholog is 100%.
Bootstrap support for F2SNT7 as seed ortholog is 100%.

Group of orthologs #2364. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 T.rubrum:139

Q5KCU3              	100.00%		F2SIR1              	100.00%
Bootstrap support for Q5KCU3 as seed ortholog is 100%.
Bootstrap support for F2SIR1 as seed ortholog is 100%.

Group of orthologs #2365. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 T.rubrum:139

Q5KFD2              	100.00%		F2SIX0              	100.00%
Bootstrap support for Q5KFD2 as seed ortholog is 100%.
Bootstrap support for F2SIX0 as seed ortholog is 100%.

Group of orthologs #2366. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 T.rubrum:139

Q5KFA1              	100.00%		F2SJ45              	100.00%
Bootstrap support for Q5KFA1 as seed ortholog is 100%.
Bootstrap support for F2SJ45 as seed ortholog is 100%.

Group of orthologs #2367. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:46 T.rubrum:49

Q5KNG9              	100.00%		F2SES7              	100.00%
Bootstrap support for Q5KNG9 as seed ortholog is 86%.
Bootstrap support for F2SES7 as seed ortholog is 87%.

Group of orthologs #2368. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 T.rubrum:139

Q5KHY7              	100.00%		F2SMD8              	100.00%
Bootstrap support for Q5KHY7 as seed ortholog is 100%.
Bootstrap support for F2SMD8 as seed ortholog is 100%.

Group of orthologs #2369. Best score 139 bits
Score difference with first non-orthologous sequence - C.neoformans:139 T.rubrum:139

Q5KPC0              	100.00%		F2SKL7              	100.00%
Bootstrap support for Q5KPC0 as seed ortholog is 100%.
Bootstrap support for F2SKL7 as seed ortholog is 100%.

Group of orthologs #2370. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 T.rubrum:138

Q5K9S8              	100.00%		F2SF02              	100.00%
Bootstrap support for Q5K9S8 as seed ortholog is 100%.
Bootstrap support for F2SF02 as seed ortholog is 100%.

Group of orthologs #2371. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 T.rubrum:138

Q5K932              	100.00%		F2SPC7              	100.00%
Bootstrap support for Q5K932 as seed ortholog is 100%.
Bootstrap support for F2SPC7 as seed ortholog is 100%.

Group of orthologs #2372. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 T.rubrum:138

Q5KAN8              	100.00%		F2SRJ5              	100.00%
Bootstrap support for Q5KAN8 as seed ortholog is 100%.
Bootstrap support for F2SRJ5 as seed ortholog is 100%.

Group of orthologs #2373. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 T.rubrum:138

Q5KKY5              	100.00%		F2SI64              	100.00%
Bootstrap support for Q5KKY5 as seed ortholog is 100%.
Bootstrap support for F2SI64 as seed ortholog is 100%.

Group of orthologs #2374. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 T.rubrum:138

Q5KF63              	100.00%		F2SQ83              	100.00%
Bootstrap support for Q5KF63 as seed ortholog is 100%.
Bootstrap support for F2SQ83 as seed ortholog is 100%.

Group of orthologs #2375. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 T.rubrum:138

Q5KG10              	100.00%		F2SPI5              	100.00%
Bootstrap support for Q5KG10 as seed ortholog is 100%.
Bootstrap support for F2SPI5 as seed ortholog is 100%.

Group of orthologs #2376. Best score 138 bits
Score difference with first non-orthologous sequence - C.neoformans:138 T.rubrum:138

Q5KCX6              	100.00%		F2STR3              	100.00%
Bootstrap support for Q5KCX6 as seed ortholog is 100%.
Bootstrap support for F2STR3 as seed ortholog is 100%.

Group of orthologs #2377. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 T.rubrum:137

Q5K9F9              	100.00%		F2SC60              	100.00%
Bootstrap support for Q5K9F9 as seed ortholog is 100%.
Bootstrap support for F2SC60 as seed ortholog is 100%.

Group of orthologs #2378. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 T.rubrum:137

Q5KLS8              	100.00%		F2SJC7              	100.00%
Bootstrap support for Q5KLS8 as seed ortholog is 100%.
Bootstrap support for F2SJC7 as seed ortholog is 100%.

Group of orthologs #2379. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 T.rubrum:137

Q5K8S2              	100.00%		F2SZP7              	100.00%
Bootstrap support for Q5K8S2 as seed ortholog is 100%.
Bootstrap support for F2SZP7 as seed ortholog is 100%.

Group of orthologs #2380. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 T.rubrum:137

Q5KMM2              	100.00%		F2STT1              	100.00%
Bootstrap support for Q5KMM2 as seed ortholog is 100%.
Bootstrap support for F2STT1 as seed ortholog is 100%.

Group of orthologs #2381. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 T.rubrum:137

Q5KMF3              	100.00%		F2SV57              	100.00%
Bootstrap support for Q5KMF3 as seed ortholog is 100%.
Bootstrap support for F2SV57 as seed ortholog is 100%.

Group of orthologs #2382. Best score 137 bits
Score difference with first non-orthologous sequence - C.neoformans:137 T.rubrum:137

Q5KPM8              	100.00%		F2SUI1              	100.00%
Bootstrap support for Q5KPM8 as seed ortholog is 100%.
Bootstrap support for F2SUI1 as seed ortholog is 100%.

Group of orthologs #2383. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 T.rubrum:136

P0CL90              	100.00%		F2SLM7              	100.00%
Bootstrap support for P0CL90 as seed ortholog is 100%.
Bootstrap support for F2SLM7 as seed ortholog is 100%.

Group of orthologs #2384. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 T.rubrum:136

Q5KDU6              	100.00%		F2SHB1              	100.00%
Bootstrap support for Q5KDU6 as seed ortholog is 100%.
Bootstrap support for F2SHB1 as seed ortholog is 100%.

Group of orthologs #2385. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 T.rubrum:136

P0CS64              	100.00%		F2SWK4              	100.00%
Bootstrap support for P0CS64 as seed ortholog is 100%.
Bootstrap support for F2SWK4 as seed ortholog is 100%.

Group of orthologs #2386. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 T.rubrum:136

Q5KLX0              	100.00%		F2SII2              	100.00%
Bootstrap support for Q5KLX0 as seed ortholog is 100%.
Bootstrap support for F2SII2 as seed ortholog is 100%.

Group of orthologs #2387. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:23 T.rubrum:136

Q5KIX8              	100.00%		F2SMK6              	100.00%
Bootstrap support for Q5KIX8 as seed ortholog is 70%.
Alternative seed ortholog is Q5KK15 (23 bits away from this cluster)
Bootstrap support for F2SMK6 as seed ortholog is 100%.

Group of orthologs #2388. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 T.rubrum:136

Q5KF40              	100.00%		F2SRL7              	100.00%
Bootstrap support for Q5KF40 as seed ortholog is 100%.
Bootstrap support for F2SRL7 as seed ortholog is 100%.

Group of orthologs #2389. Best score 136 bits
Score difference with first non-orthologous sequence - C.neoformans:136 T.rubrum:136

Q5KL77              	100.00%		F2SQX7              	100.00%
Bootstrap support for Q5KL77 as seed ortholog is 100%.
Bootstrap support for F2SQX7 as seed ortholog is 100%.

Group of orthologs #2390. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 T.rubrum:135

Q5KDN1              	100.00%		F2SE66              	100.00%
Bootstrap support for Q5KDN1 as seed ortholog is 100%.
Bootstrap support for F2SE66 as seed ortholog is 100%.

Group of orthologs #2391. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 T.rubrum:135

Q5KEZ3              	100.00%		F2SHW6              	100.00%
Bootstrap support for Q5KEZ3 as seed ortholog is 100%.
Bootstrap support for F2SHW6 as seed ortholog is 100%.

Group of orthologs #2392. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 T.rubrum:135

Q5KBW1              	100.00%		F2SL33              	100.00%
Bootstrap support for Q5KBW1 as seed ortholog is 100%.
Bootstrap support for F2SL33 as seed ortholog is 100%.

Group of orthologs #2393. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 T.rubrum:135

Q5KH32              	100.00%		F2SLE8              	100.00%
Bootstrap support for Q5KH32 as seed ortholog is 100%.
Bootstrap support for F2SLE8 as seed ortholog is 100%.

Group of orthologs #2394. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 T.rubrum:135

Q5KK88              	100.00%		F2SKF7              	100.00%
Bootstrap support for Q5KK88 as seed ortholog is 100%.
Bootstrap support for F2SKF7 as seed ortholog is 100%.

Group of orthologs #2395. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 T.rubrum:135

Q5KGI4              	100.00%		F2ST16              	100.00%
Bootstrap support for Q5KGI4 as seed ortholog is 100%.
Bootstrap support for F2ST16 as seed ortholog is 100%.

Group of orthologs #2396. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:135 T.rubrum:135

Q5KQ54              	100.00%		F2SNB3              	100.00%
Bootstrap support for Q5KQ54 as seed ortholog is 100%.
Bootstrap support for F2SNB3 as seed ortholog is 100%.

Group of orthologs #2397. Best score 135 bits
Score difference with first non-orthologous sequence - C.neoformans:19 T.rubrum:135

Q5KIS6              	100.00%		F2SUX6              	100.00%
Bootstrap support for Q5KIS6 as seed ortholog is 56%.
Alternative seed ortholog is Q5KPK3 (19 bits away from this cluster)
Bootstrap support for F2SUX6 as seed ortholog is 100%.

Group of orthologs #2398. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubrum:134

Q5KE04              	100.00%		F2SEY1              	100.00%
                    	       		F2T0M3              	17.42%
Bootstrap support for Q5KE04 as seed ortholog is 100%.
Bootstrap support for F2SEY1 as seed ortholog is 100%.

Group of orthologs #2399. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubrum:70

Q5KJ63              	100.00%		F2SDJ4              	100.00%
                    	       		F2SDJ8              	32.11%
Bootstrap support for Q5KJ63 as seed ortholog is 100%.
Bootstrap support for F2SDJ4 as seed ortholog is 96%.

Group of orthologs #2400. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubrum:134

Q5KA94              	100.00%		F2SCT8              	100.00%
Bootstrap support for Q5KA94 as seed ortholog is 100%.
Bootstrap support for F2SCT8 as seed ortholog is 100%.

Group of orthologs #2401. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:26 T.rubrum:134

Q5KBP1              	100.00%		F2SLP3              	100.00%
Bootstrap support for Q5KBP1 as seed ortholog is 46%.
Alternative seed ortholog is Q5K789 (26 bits away from this cluster)
Bootstrap support for F2SLP3 as seed ortholog is 100%.

Group of orthologs #2402. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubrum:134

Q5KBP9              	100.00%		F2SNC8              	100.00%
Bootstrap support for Q5KBP9 as seed ortholog is 100%.
Bootstrap support for F2SNC8 as seed ortholog is 100%.

Group of orthologs #2403. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubrum:134

Q5K750              	100.00%		F2STQ5              	100.00%
Bootstrap support for Q5K750 as seed ortholog is 100%.
Bootstrap support for F2STQ5 as seed ortholog is 100%.

Group of orthologs #2404. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubrum:134

Q5KI31              	100.00%		F2SL95              	100.00%
Bootstrap support for Q5KI31 as seed ortholog is 100%.
Bootstrap support for F2SL95 as seed ortholog is 100%.

Group of orthologs #2405. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubrum:134

Q5KAN5              	100.00%		F2STJ8              	100.00%
Bootstrap support for Q5KAN5 as seed ortholog is 100%.
Bootstrap support for F2STJ8 as seed ortholog is 100%.

Group of orthologs #2406. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubrum:134

Q5K7B1              	100.00%		F2SZR0              	100.00%
Bootstrap support for Q5K7B1 as seed ortholog is 100%.
Bootstrap support for F2SZR0 as seed ortholog is 100%.

Group of orthologs #2407. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:13 T.rubrum:134

Q5KI69              	100.00%		F2SSJ5              	100.00%
Bootstrap support for Q5KI69 as seed ortholog is 34%.
Alternative seed ortholog is Q5K778 (13 bits away from this cluster)
Bootstrap support for F2SSJ5 as seed ortholog is 100%.

Group of orthologs #2408. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubrum:134

Q5KEZ2              	100.00%		F2T0M5              	100.00%
Bootstrap support for Q5KEZ2 as seed ortholog is 100%.
Bootstrap support for F2T0M5 as seed ortholog is 100%.

Group of orthologs #2409. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubrum:134

Q5KMC3              	100.00%		F2SU71              	100.00%
Bootstrap support for Q5KMC3 as seed ortholog is 100%.
Bootstrap support for F2SU71 as seed ortholog is 100%.

Group of orthologs #2410. Best score 134 bits
Score difference with first non-orthologous sequence - C.neoformans:134 T.rubrum:134

Q5KMZ5              	100.00%		F2SW33              	100.00%
Bootstrap support for Q5KMZ5 as seed ortholog is 100%.
Bootstrap support for F2SW33 as seed ortholog is 100%.

Group of orthologs #2411. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:72 T.rubrum:66

Q5KCF9              	100.00%		F2SE31              	100.00%
Bootstrap support for Q5KCF9 as seed ortholog is 99%.
Bootstrap support for F2SE31 as seed ortholog is 99%.

Group of orthologs #2412. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 T.rubrum:133

P0CN24              	100.00%		F2SNZ7              	100.00%
Bootstrap support for P0CN24 as seed ortholog is 100%.
Bootstrap support for F2SNZ7 as seed ortholog is 100%.

Group of orthologs #2413. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 T.rubrum:133

Q5K946              	100.00%		F2SPZ5              	100.00%
Bootstrap support for Q5K946 as seed ortholog is 100%.
Bootstrap support for F2SPZ5 as seed ortholog is 100%.

Group of orthologs #2414. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 T.rubrum:133

Q5KMZ7              	100.00%		F2SEB5              	100.00%
Bootstrap support for Q5KMZ7 as seed ortholog is 100%.
Bootstrap support for F2SEB5 as seed ortholog is 100%.

Group of orthologs #2415. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 T.rubrum:133

Q5KPH7              	100.00%		F2SF76              	100.00%
Bootstrap support for Q5KPH7 as seed ortholog is 100%.
Bootstrap support for F2SF76 as seed ortholog is 100%.

Group of orthologs #2416. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 T.rubrum:133

Q5KDQ5              	100.00%		F2SQ53              	100.00%
Bootstrap support for Q5KDQ5 as seed ortholog is 100%.
Bootstrap support for F2SQ53 as seed ortholog is 100%.

Group of orthologs #2417. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 T.rubrum:133

Q5KJP0              	100.00%		F2SJS4              	100.00%
Bootstrap support for Q5KJP0 as seed ortholog is 100%.
Bootstrap support for F2SJS4 as seed ortholog is 100%.

Group of orthologs #2418. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 T.rubrum:133

Q5K8Q1              	100.00%		F2SUS8              	100.00%
Bootstrap support for Q5K8Q1 as seed ortholog is 100%.
Bootstrap support for F2SUS8 as seed ortholog is 100%.

Group of orthologs #2419. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 T.rubrum:133

Q5KE67              	100.00%		F2SZT4              	100.00%
Bootstrap support for Q5KE67 as seed ortholog is 100%.
Bootstrap support for F2SZT4 as seed ortholog is 100%.

Group of orthologs #2420. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 T.rubrum:133

Q5KPA9              	100.00%		F2SV58              	100.00%
Bootstrap support for Q5KPA9 as seed ortholog is 100%.
Bootstrap support for F2SV58 as seed ortholog is 100%.

Group of orthologs #2421. Best score 133 bits
Score difference with first non-orthologous sequence - C.neoformans:133 T.rubrum:133

Q5KPD6              	100.00%		F2SV64              	100.00%
Bootstrap support for Q5KPD6 as seed ortholog is 100%.
Bootstrap support for F2SV64 as seed ortholog is 100%.

Group of orthologs #2422. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 T.rubrum:132

Q5KFD7              	100.00%		F2SJC5              	100.00%
Q5KFD6              	49.08%		
Bootstrap support for Q5KFD7 as seed ortholog is 100%.
Bootstrap support for F2SJC5 as seed ortholog is 100%.

Group of orthologs #2423. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 T.rubrum:132

Q5KDF9              	100.00%		F2SP46              	100.00%
Q5KQ97              	14.99%		
Bootstrap support for Q5KDF9 as seed ortholog is 100%.
Bootstrap support for F2SP46 as seed ortholog is 100%.

Group of orthologs #2424. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:87 T.rubrum:75

Q5KN90              	100.00%		F2SPK4              	100.00%
Q5KN24              	54.15%		
Bootstrap support for Q5KN90 as seed ortholog is 94%.
Bootstrap support for F2SPK4 as seed ortholog is 91%.

Group of orthologs #2425. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 T.rubrum:132

Q5KFG9              	100.00%		F2SLV7              	100.00%
Bootstrap support for Q5KFG9 as seed ortholog is 100%.
Bootstrap support for F2SLV7 as seed ortholog is 100%.

Group of orthologs #2426. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 T.rubrum:132

Q5KL56              	100.00%		F2SGY9              	100.00%
Bootstrap support for Q5KL56 as seed ortholog is 100%.
Bootstrap support for F2SGY9 as seed ortholog is 100%.

Group of orthologs #2427. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 T.rubrum:132

Q5KFW1              	100.00%		F2SMH7              	100.00%
Bootstrap support for Q5KFW1 as seed ortholog is 100%.
Bootstrap support for F2SMH7 as seed ortholog is 100%.

Group of orthologs #2428. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 T.rubrum:89

Q5KND7              	100.00%		F2SHV9              	100.00%
Bootstrap support for Q5KND7 as seed ortholog is 100%.
Bootstrap support for F2SHV9 as seed ortholog is 97%.

Group of orthologs #2429. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 T.rubrum:132

Q5KL38              	100.00%		F2SKQ8              	100.00%
Bootstrap support for Q5KL38 as seed ortholog is 100%.
Bootstrap support for F2SKQ8 as seed ortholog is 100%.

Group of orthologs #2430. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 T.rubrum:132

Q5KEQ5              	100.00%		F2SVL5              	100.00%
Bootstrap support for Q5KEQ5 as seed ortholog is 100%.
Bootstrap support for F2SVL5 as seed ortholog is 100%.

Group of orthologs #2431. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 T.rubrum:132

Q5KHU0              	100.00%		F2SWD9              	100.00%
Bootstrap support for Q5KHU0 as seed ortholog is 100%.
Bootstrap support for F2SWD9 as seed ortholog is 100%.

Group of orthologs #2432. Best score 132 bits
Score difference with first non-orthologous sequence - C.neoformans:132 T.rubrum:132

Q5KP64              	100.00%		F2SXF8              	100.00%
Bootstrap support for Q5KP64 as seed ortholog is 100%.
Bootstrap support for F2SXF8 as seed ortholog is 100%.

Group of orthologs #2433. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubrum:131

Q5K7D1              	100.00%		F2SKW9              	100.00%
                    	       		F2SYX6              	24.95%
Bootstrap support for Q5K7D1 as seed ortholog is 100%.
Bootstrap support for F2SKW9 as seed ortholog is 100%.

Group of orthologs #2434. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubrum:131

Q5K788              	100.00%		F2SED4              	100.00%
Bootstrap support for Q5K788 as seed ortholog is 100%.
Bootstrap support for F2SED4 as seed ortholog is 100%.

Group of orthologs #2435. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubrum:131

Q5KCY0              	100.00%		F2SCN3              	100.00%
Bootstrap support for Q5KCY0 as seed ortholog is 100%.
Bootstrap support for F2SCN3 as seed ortholog is 100%.

Group of orthologs #2436. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubrum:131

Q5K708              	100.00%		F2SKH0              	100.00%
Bootstrap support for Q5K708 as seed ortholog is 100%.
Bootstrap support for F2SKH0 as seed ortholog is 100%.

Group of orthologs #2437. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubrum:131

Q5K7A4              	100.00%		F2SK98              	100.00%
Bootstrap support for Q5K7A4 as seed ortholog is 100%.
Bootstrap support for F2SK98 as seed ortholog is 100%.

Group of orthologs #2438. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubrum:131

Q5KBG2              	100.00%		F2SJ09              	100.00%
Bootstrap support for Q5KBG2 as seed ortholog is 100%.
Bootstrap support for F2SJ09 as seed ortholog is 100%.

Group of orthologs #2439. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubrum:131

Q5K7F8              	100.00%		F2SNS8              	100.00%
Bootstrap support for Q5K7F8 as seed ortholog is 100%.
Bootstrap support for F2SNS8 as seed ortholog is 100%.

Group of orthologs #2440. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubrum:131

Q5KFV0              	100.00%		F2SG95              	100.00%
Bootstrap support for Q5KFV0 as seed ortholog is 100%.
Bootstrap support for F2SG95 as seed ortholog is 100%.

Group of orthologs #2441. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubrum:131

Q5KLW2              	100.00%		F2SCL6              	100.00%
Bootstrap support for Q5KLW2 as seed ortholog is 100%.
Bootstrap support for F2SCL6 as seed ortholog is 100%.

Group of orthologs #2442. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubrum:131

Q5KN02              	100.00%		F2SDT0              	100.00%
Bootstrap support for Q5KN02 as seed ortholog is 100%.
Bootstrap support for F2SDT0 as seed ortholog is 100%.

Group of orthologs #2443. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubrum:131

Q5KPI6              	100.00%		F2SI78              	100.00%
Bootstrap support for Q5KPI6 as seed ortholog is 100%.
Bootstrap support for F2SI78 as seed ortholog is 100%.

Group of orthologs #2444. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubrum:131

Q5KCL5              	100.00%		F2SUU5              	100.00%
Bootstrap support for Q5KCL5 as seed ortholog is 100%.
Bootstrap support for F2SUU5 as seed ortholog is 100%.

Group of orthologs #2445. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubrum:85

Q5KD12              	100.00%		F2SXA1              	100.00%
Bootstrap support for Q5KD12 as seed ortholog is 100%.
Bootstrap support for F2SXA1 as seed ortholog is 99%.

Group of orthologs #2446. Best score 131 bits
Score difference with first non-orthologous sequence - C.neoformans:131 T.rubrum:59

Q5KPS0              	100.00%		F2T0Z3              	100.00%
Bootstrap support for Q5KPS0 as seed ortholog is 100%.
Bootstrap support for F2T0Z3 as seed ortholog is 85%.

Group of orthologs #2447. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 T.rubrum:130

Q5KN99              	100.00%		F2SZ99              	100.00%
Q5KFK5              	5.99%		
Bootstrap support for Q5KN99 as seed ortholog is 100%.
Bootstrap support for F2SZ99 as seed ortholog is 100%.

Group of orthologs #2448. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:21 T.rubrum:130

Q5K9I5              	100.00%		F2SC99              	100.00%
Bootstrap support for Q5K9I5 as seed ortholog is 68%.
Alternative seed ortholog is Q5K6U2 (21 bits away from this cluster)
Bootstrap support for F2SC99 as seed ortholog is 100%.

Group of orthologs #2449. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 T.rubrum:130

Q5KA82              	100.00%		F2SGJ6              	100.00%
Bootstrap support for Q5KA82 as seed ortholog is 100%.
Bootstrap support for F2SGJ6 as seed ortholog is 100%.

Group of orthologs #2450. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 T.rubrum:130

Q5KNI7              	100.00%		F2SXS7              	100.00%
Bootstrap support for Q5KNI7 as seed ortholog is 100%.
Bootstrap support for F2SXS7 as seed ortholog is 100%.

Group of orthologs #2451. Best score 130 bits
Score difference with first non-orthologous sequence - C.neoformans:130 T.rubrum:130

Q5KL58              	100.00%		F2T148              	100.00%
Bootstrap support for Q5KL58 as seed ortholog is 100%.
Bootstrap support for F2T148 as seed ortholog is 100%.

Group of orthologs #2452. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 T.rubrum:129

Q5KCE0              	100.00%		F2SE02              	100.00%
Bootstrap support for Q5KCE0 as seed ortholog is 100%.
Bootstrap support for F2SE02 as seed ortholog is 100%.

Group of orthologs #2453. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 T.rubrum:129

Q5K8W4              	100.00%		F2SHT0              	100.00%
Bootstrap support for Q5K8W4 as seed ortholog is 100%.
Bootstrap support for F2SHT0 as seed ortholog is 100%.

Group of orthologs #2454. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 T.rubrum:129

P40909              	100.00%		F2SQN7              	100.00%
Bootstrap support for P40909 as seed ortholog is 100%.
Bootstrap support for F2SQN7 as seed ortholog is 100%.

Group of orthologs #2455. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 T.rubrum:129

P0CP40              	100.00%		F2SR68              	100.00%
Bootstrap support for P0CP40 as seed ortholog is 100%.
Bootstrap support for F2SR68 as seed ortholog is 100%.

Group of orthologs #2456. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 T.rubrum:129

P0CL96              	100.00%		F2SRW6              	100.00%
Bootstrap support for P0CL96 as seed ortholog is 100%.
Bootstrap support for F2SRW6 as seed ortholog is 100%.

Group of orthologs #2457. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 T.rubrum:129

Q5K7N4              	100.00%		F2SQH7              	100.00%
Bootstrap support for Q5K7N4 as seed ortholog is 100%.
Bootstrap support for F2SQH7 as seed ortholog is 100%.

Group of orthologs #2458. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 T.rubrum:129

Q5KCM4              	100.00%		F2SLK0              	100.00%
Bootstrap support for Q5KCM4 as seed ortholog is 100%.
Bootstrap support for F2SLK0 as seed ortholog is 100%.

Group of orthologs #2459. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 T.rubrum:129

Q5KJS6              	100.00%		F2SH58              	100.00%
Bootstrap support for Q5KJS6 as seed ortholog is 100%.
Bootstrap support for F2SH58 as seed ortholog is 100%.

Group of orthologs #2460. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 T.rubrum:129

Q5KGD9              	100.00%		F2SPR5              	100.00%
Bootstrap support for Q5KGD9 as seed ortholog is 100%.
Bootstrap support for F2SPR5 as seed ortholog is 100%.

Group of orthologs #2461. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 T.rubrum:129

Q5KBQ4              	100.00%		F2SUE2              	100.00%
Bootstrap support for Q5KBQ4 as seed ortholog is 100%.
Bootstrap support for F2SUE2 as seed ortholog is 100%.

Group of orthologs #2462. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:65 T.rubrum:129

Q5KEH1              	100.00%		F2SSZ3              	100.00%
Bootstrap support for Q5KEH1 as seed ortholog is 99%.
Bootstrap support for F2SSZ3 as seed ortholog is 100%.

Group of orthologs #2463. Best score 129 bits
Score difference with first non-orthologous sequence - C.neoformans:129 T.rubrum:23

Q5KJT6              	100.00%		F2T0L8              	100.00%
Bootstrap support for Q5KJT6 as seed ortholog is 100%.
Bootstrap support for F2T0L8 as seed ortholog is 71%.
Alternative seed ortholog is F2SXE4 (23 bits away from this cluster)

Group of orthologs #2464. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 T.rubrum:128

Q5KAU4              	100.00%		F2SMJ7              	100.00%
Bootstrap support for Q5KAU4 as seed ortholog is 100%.
Bootstrap support for F2SMJ7 as seed ortholog is 100%.

Group of orthologs #2465. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 T.rubrum:128

Q5K7N6              	100.00%		F2SQX1              	100.00%
Bootstrap support for Q5K7N6 as seed ortholog is 100%.
Bootstrap support for F2SQX1 as seed ortholog is 100%.

Group of orthologs #2466. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 T.rubrum:128

Q5K829              	100.00%		F2SS51              	100.00%
Bootstrap support for Q5K829 as seed ortholog is 100%.
Bootstrap support for F2SS51 as seed ortholog is 100%.

Group of orthologs #2467. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 T.rubrum:128

Q5K9B0              	100.00%		F2STU1              	100.00%
Bootstrap support for Q5K9B0 as seed ortholog is 100%.
Bootstrap support for F2STU1 as seed ortholog is 100%.

Group of orthologs #2468. Best score 128 bits
Score difference with first non-orthologous sequence - C.neoformans:128 T.rubrum:128

Q5KGR1              	100.00%		F2SMK8              	100.00%
Bootstrap support for Q5KGR1 as seed ortholog is 100%.
Bootstrap support for F2SMK8 as seed ortholog is 100%.

Group of orthologs #2469. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 T.rubrum:127

Q5K7W3              	100.00%		F2SML4              	100.00%
Bootstrap support for Q5K7W3 as seed ortholog is 100%.
Bootstrap support for F2SML4 as seed ortholog is 100%.

Group of orthologs #2470. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 T.rubrum:127

Q5KF76              	100.00%		F2SGD0              	100.00%
Bootstrap support for Q5KF76 as seed ortholog is 100%.
Bootstrap support for F2SGD0 as seed ortholog is 100%.

Group of orthologs #2471. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 T.rubrum:127

P0CN16              	100.00%		F2SPU1              	100.00%
Bootstrap support for P0CN16 as seed ortholog is 100%.
Bootstrap support for F2SPU1 as seed ortholog is 100%.

Group of orthologs #2472. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 T.rubrum:127

Q5K811              	100.00%		F2SQN8              	100.00%
Bootstrap support for Q5K811 as seed ortholog is 100%.
Bootstrap support for F2SQN8 as seed ortholog is 100%.

Group of orthologs #2473. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 T.rubrum:127

Q5KFL5              	100.00%		F2SKI2              	100.00%
Bootstrap support for Q5KFL5 as seed ortholog is 100%.
Bootstrap support for F2SKI2 as seed ortholog is 100%.

Group of orthologs #2474. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 T.rubrum:127

Q5KBT9              	100.00%		F2SPJ1              	100.00%
Bootstrap support for Q5KBT9 as seed ortholog is 100%.
Bootstrap support for F2SPJ1 as seed ortholog is 100%.

Group of orthologs #2475. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:39 T.rubrum:127

Q5KJ65              	100.00%		F2SNX5              	100.00%
Bootstrap support for Q5KJ65 as seed ortholog is 88%.
Bootstrap support for F2SNX5 as seed ortholog is 100%.

Group of orthologs #2476. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 T.rubrum:127

Q5KBR9              	100.00%		F2SX29              	100.00%
Bootstrap support for Q5KBR9 as seed ortholog is 100%.
Bootstrap support for F2SX29 as seed ortholog is 100%.

Group of orthologs #2477. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 T.rubrum:127

Q5KFB6              	100.00%		F2SUN1              	100.00%
Bootstrap support for Q5KFB6 as seed ortholog is 100%.
Bootstrap support for F2SUN1 as seed ortholog is 100%.

Group of orthologs #2478. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 T.rubrum:127

Q5KFF9              	100.00%		F2SXN7              	100.00%
Bootstrap support for Q5KFF9 as seed ortholog is 100%.
Bootstrap support for F2SXN7 as seed ortholog is 100%.

Group of orthologs #2479. Best score 127 bits
Score difference with first non-orthologous sequence - C.neoformans:127 T.rubrum:127

Q5KDU3              	100.00%		F2SZG7              	100.00%
Bootstrap support for Q5KDU3 as seed ortholog is 100%.
Bootstrap support for F2SZG7 as seed ortholog is 100%.

Group of orthologs #2480. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:47 T.rubrum:32

Q5KDM8              	100.00%		F2SFQ3              	100.00%
Q5KDM5              	88.31%		
Bootstrap support for Q5KDM8 as seed ortholog is 99%.
Bootstrap support for F2SFQ3 as seed ortholog is 93%.

Group of orthologs #2481. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 T.rubrum:126

P0CP06              	100.00%		F2SFX1              	100.00%
Bootstrap support for P0CP06 as seed ortholog is 100%.
Bootstrap support for F2SFX1 as seed ortholog is 100%.

Group of orthologs #2482. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 T.rubrum:126

Q5KF95              	100.00%		F2SEN2              	100.00%
Bootstrap support for Q5KF95 as seed ortholog is 100%.
Bootstrap support for F2SEN2 as seed ortholog is 100%.

Group of orthologs #2483. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 T.rubrum:126

Q5K786              	100.00%		F2SPU7              	100.00%
Bootstrap support for Q5K786 as seed ortholog is 100%.
Bootstrap support for F2SPU7 as seed ortholog is 100%.

Group of orthologs #2484. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 T.rubrum:126

Q5KD37              	100.00%		F2SJW0              	100.00%
Bootstrap support for Q5KD37 as seed ortholog is 100%.
Bootstrap support for F2SJW0 as seed ortholog is 100%.

Group of orthologs #2485. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 T.rubrum:126

P0CN12              	100.00%		F2STU8              	100.00%
Bootstrap support for P0CN12 as seed ortholog is 100%.
Bootstrap support for F2STU8 as seed ortholog is 100%.

Group of orthologs #2486. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 T.rubrum:126

Q5KNN4              	100.00%		F2SG80              	100.00%
Bootstrap support for Q5KNN4 as seed ortholog is 100%.
Bootstrap support for F2SG80 as seed ortholog is 100%.

Group of orthologs #2487. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 T.rubrum:126

Q5KFE4              	100.00%		F2SQF7              	100.00%
Bootstrap support for Q5KFE4 as seed ortholog is 100%.
Bootstrap support for F2SQF7 as seed ortholog is 100%.

Group of orthologs #2488. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 T.rubrum:126

P0CO36              	100.00%		F2SZB0              	100.00%
Bootstrap support for P0CO36 as seed ortholog is 100%.
Bootstrap support for F2SZB0 as seed ortholog is 100%.

Group of orthologs #2489. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 T.rubrum:126

Q5KCT3              	100.00%		F2SWS0              	100.00%
Bootstrap support for Q5KCT3 as seed ortholog is 100%.
Bootstrap support for F2SWS0 as seed ortholog is 100%.

Group of orthologs #2490. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 T.rubrum:126

Q5KGH0              	100.00%		F2STX0              	100.00%
Bootstrap support for Q5KGH0 as seed ortholog is 100%.
Bootstrap support for F2STX0 as seed ortholog is 100%.

Group of orthologs #2491. Best score 126 bits
Score difference with first non-orthologous sequence - C.neoformans:126 T.rubrum:35

Q5KMV0              	100.00%		F2SQF3              	100.00%
Bootstrap support for Q5KMV0 as seed ortholog is 100%.
Bootstrap support for F2SQF3 as seed ortholog is 84%.

Group of orthologs #2492. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 T.rubrum:125

Q5KLH3              	100.00%		F2SE38              	100.00%
Bootstrap support for Q5KLH3 as seed ortholog is 100%.
Bootstrap support for F2SE38 as seed ortholog is 100%.

Group of orthologs #2493. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 T.rubrum:125

Q5KJ67              	100.00%		F2SQY0              	100.00%
Bootstrap support for Q5KJ67 as seed ortholog is 100%.
Bootstrap support for F2SQY0 as seed ortholog is 100%.

Group of orthologs #2494. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:30 T.rubrum:125

Q5KDT8              	100.00%		F2SYH3              	100.00%
Bootstrap support for Q5KDT8 as seed ortholog is 91%.
Bootstrap support for F2SYH3 as seed ortholog is 100%.

Group of orthologs #2495. Best score 125 bits
Score difference with first non-orthologous sequence - C.neoformans:125 T.rubrum:125

Q5KMY1              	100.00%		F2SVR1              	100.00%
Bootstrap support for Q5KMY1 as seed ortholog is 100%.
Bootstrap support for F2SVR1 as seed ortholog is 100%.

Group of orthologs #2496. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 T.rubrum:124

Q5KPS7              	100.00%		F2SQV9              	100.00%
                    	       		F2SZ88              	35.88%
Bootstrap support for Q5KPS7 as seed ortholog is 100%.
Bootstrap support for F2SQV9 as seed ortholog is 100%.

Group of orthologs #2497. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 T.rubrum:124

Q5K8U0              	100.00%		F2SFG2              	100.00%
Bootstrap support for Q5K8U0 as seed ortholog is 100%.
Bootstrap support for F2SFG2 as seed ortholog is 100%.

Group of orthologs #2498. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 T.rubrum:124

Q5K8D1              	100.00%		F2SMT2              	100.00%
Bootstrap support for Q5K8D1 as seed ortholog is 100%.
Bootstrap support for F2SMT2 as seed ortholog is 100%.

Group of orthologs #2499. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 T.rubrum:124

P0CQ38              	100.00%		F2STR7              	100.00%
Bootstrap support for P0CQ38 as seed ortholog is 100%.
Bootstrap support for F2STR7 as seed ortholog is 100%.

Group of orthologs #2500. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 T.rubrum:124

Q5KJ14              	100.00%		F2SHV0              	100.00%
Bootstrap support for Q5KJ14 as seed ortholog is 100%.
Bootstrap support for F2SHV0 as seed ortholog is 100%.

Group of orthologs #2501. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 T.rubrum:124

Q5KLV3              	100.00%		F2SIB6              	100.00%
Bootstrap support for Q5KLV3 as seed ortholog is 100%.
Bootstrap support for F2SIB6 as seed ortholog is 100%.

Group of orthologs #2502. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 T.rubrum:124

Q5KGX1              	100.00%		F2SRQ9              	100.00%
Bootstrap support for Q5KGX1 as seed ortholog is 100%.
Bootstrap support for F2SRQ9 as seed ortholog is 100%.

Group of orthologs #2503. Best score 124 bits
Score difference with first non-orthologous sequence - C.neoformans:124 T.rubrum:124

Q5KCF0              	100.00%		F2SZF9              	100.00%
Bootstrap support for Q5KCF0 as seed ortholog is 100%.
Bootstrap support for F2SZF9 as seed ortholog is 100%.

Group of orthologs #2504. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 T.rubrum:43

Q5KKR5              	100.00%		F2SYP7              	100.00%
Q5KKR6              	100.00%		F2T0G1              	100.00%
                    	       		F2SW15              	11.76%
Bootstrap support for Q5KKR5 as seed ortholog is 100%.
Bootstrap support for Q5KKR6 as seed ortholog is 100%.
Bootstrap support for F2SYP7 as seed ortholog is 92%.
Bootstrap support for F2T0G1 as seed ortholog is 75%.

Group of orthologs #2505. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 T.rubrum:123

Q5KAR5              	100.00%		F2SH81              	100.00%
Bootstrap support for Q5KAR5 as seed ortholog is 100%.
Bootstrap support for F2SH81 as seed ortholog is 100%.

Group of orthologs #2506. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 T.rubrum:123

Q5K704              	100.00%		F2SM45              	100.00%
Bootstrap support for Q5K704 as seed ortholog is 100%.
Bootstrap support for F2SM45 as seed ortholog is 100%.

Group of orthologs #2507. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 T.rubrum:123

Q5KL57              	100.00%		F2SI22              	100.00%
Bootstrap support for Q5KL57 as seed ortholog is 100%.
Bootstrap support for F2SI22 as seed ortholog is 100%.

Group of orthologs #2508. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 T.rubrum:123

Q5KLD3              	100.00%		F2SJT9              	100.00%
Bootstrap support for Q5KLD3 as seed ortholog is 100%.
Bootstrap support for F2SJT9 as seed ortholog is 100%.

Group of orthologs #2509. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 T.rubrum:123

Q5KFF0              	100.00%		F2STH0              	100.00%
Bootstrap support for Q5KFF0 as seed ortholog is 100%.
Bootstrap support for F2STH0 as seed ortholog is 100%.

Group of orthologs #2510. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 T.rubrum:123

Q5KKJ3              	100.00%		F2SVU0              	100.00%
Bootstrap support for Q5KKJ3 as seed ortholog is 100%.
Bootstrap support for F2SVU0 as seed ortholog is 100%.

Group of orthologs #2511. Best score 123 bits
Score difference with first non-orthologous sequence - C.neoformans:123 T.rubrum:123

Q5KKN4              	100.00%		F2SXJ3              	100.00%
Bootstrap support for Q5KKN4 as seed ortholog is 100%.
Bootstrap support for F2SXJ3 as seed ortholog is 100%.

Group of orthologs #2512. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 T.rubrum:122

Q5K909              	100.00%		F2SI15              	100.00%
Bootstrap support for Q5K909 as seed ortholog is 100%.
Bootstrap support for F2SI15 as seed ortholog is 100%.

Group of orthologs #2513. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 T.rubrum:122

Q5KL25              	100.00%		F2SLA1              	100.00%
Bootstrap support for Q5KL25 as seed ortholog is 100%.
Bootstrap support for F2SLA1 as seed ortholog is 100%.

Group of orthologs #2514. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 T.rubrum:122

Q5KF15              	100.00%		F2SV52              	100.00%
Bootstrap support for Q5KF15 as seed ortholog is 100%.
Bootstrap support for F2SV52 as seed ortholog is 100%.

Group of orthologs #2515. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 T.rubrum:122

Q5KDW2              	100.00%		F2SWA3              	100.00%
Bootstrap support for Q5KDW2 as seed ortholog is 100%.
Bootstrap support for F2SWA3 as seed ortholog is 100%.

Group of orthologs #2516. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 T.rubrum:122

Q5KJG4              	100.00%		F2SRX7              	100.00%
Bootstrap support for Q5KJG4 as seed ortholog is 100%.
Bootstrap support for F2SRX7 as seed ortholog is 100%.

Group of orthologs #2517. Best score 122 bits
Score difference with first non-orthologous sequence - C.neoformans:122 T.rubrum:122

Q5KIF0              	100.00%		F2SVN0              	100.00%
Bootstrap support for Q5KIF0 as seed ortholog is 100%.
Bootstrap support for F2SVN0 as seed ortholog is 100%.

Group of orthologs #2518. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubrum:121

Q5KPJ0              	100.00%		F2SSA2              	100.00%
Q5KJD9              	10.71%		
Bootstrap support for Q5KPJ0 as seed ortholog is 100%.
Bootstrap support for F2SSA2 as seed ortholog is 100%.

Group of orthologs #2519. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubrum:121

Q5KHN0              	100.00%		F2SC11              	100.00%
Bootstrap support for Q5KHN0 as seed ortholog is 100%.
Bootstrap support for F2SC11 as seed ortholog is 100%.

Group of orthologs #2520. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubrum:121

P0CR88              	100.00%		F2SN53              	100.00%
Bootstrap support for P0CR88 as seed ortholog is 100%.
Bootstrap support for F2SN53 as seed ortholog is 100%.

Group of orthologs #2521. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubrum:121

Q5KNW9              	100.00%		F2SCM4              	100.00%
Bootstrap support for Q5KNW9 as seed ortholog is 100%.
Bootstrap support for F2SCM4 as seed ortholog is 100%.

Group of orthologs #2522. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubrum:121

Q5KPR9              	100.00%		F2SCJ0              	100.00%
Bootstrap support for Q5KPR9 as seed ortholog is 100%.
Bootstrap support for F2SCJ0 as seed ortholog is 100%.

Group of orthologs #2523. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubrum:121

Q5KI82              	100.00%		F2SPM3              	100.00%
Bootstrap support for Q5KI82 as seed ortholog is 100%.
Bootstrap support for F2SPM3 as seed ortholog is 100%.

Group of orthologs #2524. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubrum:121

Q5K7Y5              	100.00%		F2T146              	100.00%
Bootstrap support for Q5K7Y5 as seed ortholog is 100%.
Bootstrap support for F2T146 as seed ortholog is 100%.

Group of orthologs #2525. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubrum:121

Q5KEY6              	100.00%		F2SWE9              	100.00%
Bootstrap support for Q5KEY6 as seed ortholog is 100%.
Bootstrap support for F2SWE9 as seed ortholog is 100%.

Group of orthologs #2526. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubrum:121

Q5KMX9              	100.00%		F2SP80              	100.00%
Bootstrap support for Q5KMX9 as seed ortholog is 100%.
Bootstrap support for F2SP80 as seed ortholog is 100%.

Group of orthologs #2527. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubrum:121

Q5KN44              	100.00%		F2SWE6              	100.00%
Bootstrap support for Q5KN44 as seed ortholog is 100%.
Bootstrap support for F2SWE6 as seed ortholog is 100%.

Group of orthologs #2528. Best score 121 bits
Score difference with first non-orthologous sequence - C.neoformans:121 T.rubrum:121

Q5KP46              	100.00%		F2SYZ9              	100.00%
Bootstrap support for Q5KP46 as seed ortholog is 100%.
Bootstrap support for F2SYZ9 as seed ortholog is 100%.

Group of orthologs #2529. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 T.rubrum:120

P0CM00              	100.00%		F2SJW3              	100.00%
Bootstrap support for P0CM00 as seed ortholog is 100%.
Bootstrap support for F2SJW3 as seed ortholog is 100%.

Group of orthologs #2530. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 T.rubrum:120

Q5KM48              	100.00%		F2SCH7              	100.00%
Bootstrap support for Q5KM48 as seed ortholog is 100%.
Bootstrap support for F2SCH7 as seed ortholog is 100%.

Group of orthologs #2531. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 T.rubrum:120

Q5K9G7              	100.00%		F2T0J5              	100.00%
Bootstrap support for Q5K9G7 as seed ortholog is 100%.
Bootstrap support for F2T0J5 as seed ortholog is 100%.

Group of orthologs #2532. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:40 T.rubrum:120

Q5KHP2              	100.00%		F2STA4              	100.00%
Bootstrap support for Q5KHP2 as seed ortholog is 83%.
Bootstrap support for F2STA4 as seed ortholog is 100%.

Group of orthologs #2533. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 T.rubrum:120

Q5K9W0              	100.00%		F2T0D9              	100.00%
Bootstrap support for Q5K9W0 as seed ortholog is 100%.
Bootstrap support for F2T0D9 as seed ortholog is 100%.

Group of orthologs #2534. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 T.rubrum:120

Q5KI22              	100.00%		F2STT4              	100.00%
Bootstrap support for Q5KI22 as seed ortholog is 100%.
Bootstrap support for F2STT4 as seed ortholog is 100%.

Group of orthologs #2535. Best score 120 bits
Score difference with first non-orthologous sequence - C.neoformans:120 T.rubrum:120

Q5KI01              	100.00%		F2SW35              	100.00%
Bootstrap support for Q5KI01 as seed ortholog is 100%.
Bootstrap support for F2SW35 as seed ortholog is 100%.

Group of orthologs #2536. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 T.rubrum:119

Q5KEE1              	100.00%		F2SGW7              	100.00%
Bootstrap support for Q5KEE1 as seed ortholog is 100%.
Bootstrap support for F2SGW7 as seed ortholog is 100%.

Group of orthologs #2537. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 T.rubrum:119

Q5KAE8              	100.00%		F2SRR0              	100.00%
Bootstrap support for Q5KAE8 as seed ortholog is 100%.
Bootstrap support for F2SRR0 as seed ortholog is 100%.

Group of orthologs #2538. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 T.rubrum:119

Q5K6V7              	100.00%		F2SVM2              	100.00%
Bootstrap support for Q5K6V7 as seed ortholog is 100%.
Bootstrap support for F2SVM2 as seed ortholog is 100%.

Group of orthologs #2539. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:32 T.rubrum:10

Q5KBA6              	100.00%		F2ST21              	100.00%
Bootstrap support for Q5KBA6 as seed ortholog is 93%.
Bootstrap support for F2ST21 as seed ortholog is 73%.
Alternative seed ortholog is F2SWV7 (10 bits away from this cluster)

Group of orthologs #2540. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 T.rubrum:119

Q5KKA0              	100.00%		F2SL29              	100.00%
Bootstrap support for Q5KKA0 as seed ortholog is 100%.
Bootstrap support for F2SL29 as seed ortholog is 100%.

Group of orthologs #2541. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 T.rubrum:119

Q5K7I4              	100.00%		F2SZW9              	100.00%
Bootstrap support for Q5K7I4 as seed ortholog is 100%.
Bootstrap support for F2SZW9 as seed ortholog is 100%.

Group of orthologs #2542. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 T.rubrum:119

Q5KPZ4              	100.00%		F2SSE8              	100.00%
Bootstrap support for Q5KPZ4 as seed ortholog is 100%.
Bootstrap support for F2SSE8 as seed ortholog is 100%.

Group of orthologs #2543. Best score 119 bits
Score difference with first non-orthologous sequence - C.neoformans:119 T.rubrum:119

Q5KJ49              	100.00%		F2T0H8              	100.00%
Bootstrap support for Q5KJ49 as seed ortholog is 100%.
Bootstrap support for F2T0H8 as seed ortholog is 100%.

Group of orthologs #2544. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubrum:118

Q5KH57              	100.00%		F2SKA2              	100.00%
Q5KH47              	14.25%		
Bootstrap support for Q5KH57 as seed ortholog is 100%.
Bootstrap support for F2SKA2 as seed ortholog is 100%.

Group of orthologs #2545. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubrum:118

Q5K8R3              	100.00%		F2SXC7              	100.00%
Q5KK52              	11.35%		
Bootstrap support for Q5K8R3 as seed ortholog is 100%.
Bootstrap support for F2SXC7 as seed ortholog is 100%.

Group of orthologs #2546. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:50 T.rubrum:71

P0CR12              	100.00%		F2SK80              	100.00%
Bootstrap support for P0CR12 as seed ortholog is 44%.
Alternative seed ortholog is P0CQ78 (50 bits away from this cluster)
Bootstrap support for F2SK80 as seed ortholog is 83%.

Group of orthologs #2547. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubrum:118

Q5KIB8              	100.00%		F2SBZ2              	100.00%
Bootstrap support for Q5KIB8 as seed ortholog is 100%.
Bootstrap support for F2SBZ2 as seed ortholog is 100%.

Group of orthologs #2548. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubrum:118

Q5KJG6              	100.00%		F2SCI8              	100.00%
Bootstrap support for Q5KJG6 as seed ortholog is 100%.
Bootstrap support for F2SCI8 as seed ortholog is 100%.

Group of orthologs #2549. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubrum:118

Q5KEN7              	100.00%		F2SL45              	100.00%
Bootstrap support for Q5KEN7 as seed ortholog is 100%.
Bootstrap support for F2SL45 as seed ortholog is 100%.

Group of orthologs #2550. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubrum:118

P0CP48              	100.00%		F2SVT8              	100.00%
Bootstrap support for P0CP48 as seed ortholog is 100%.
Bootstrap support for F2SVT8 as seed ortholog is 100%.

Group of orthologs #2551. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubrum:118

Q5K8K1              	100.00%		F2SWY3              	100.00%
Bootstrap support for Q5K8K1 as seed ortholog is 100%.
Bootstrap support for F2SWY3 as seed ortholog is 100%.

Group of orthologs #2552. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubrum:118

Q5KIN8              	100.00%		F2SQ66              	100.00%
Bootstrap support for Q5KIN8 as seed ortholog is 100%.
Bootstrap support for F2SQ66 as seed ortholog is 100%.

Group of orthologs #2553. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubrum:118

Q5KFY5              	100.00%		F2SUX1              	100.00%
Bootstrap support for Q5KFY5 as seed ortholog is 100%.
Bootstrap support for F2SUX1 as seed ortholog is 100%.

Group of orthologs #2554. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubrum:118

Q5KHN8              	100.00%		F2SVG7              	100.00%
Bootstrap support for Q5KHN8 as seed ortholog is 100%.
Bootstrap support for F2SVG7 as seed ortholog is 100%.

Group of orthologs #2555. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubrum:118

Q5KPT6              	100.00%		F2SUU4              	100.00%
Bootstrap support for Q5KPT6 as seed ortholog is 100%.
Bootstrap support for F2SUU4 as seed ortholog is 100%.

Group of orthologs #2556. Best score 118 bits
Score difference with first non-orthologous sequence - C.neoformans:118 T.rubrum:118

Q5KK58              	100.00%		F2T0I1              	100.00%
Bootstrap support for Q5KK58 as seed ortholog is 100%.
Bootstrap support for F2T0I1 as seed ortholog is 100%.

Group of orthologs #2557. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubrum:117

P0CR68              	100.00%		F2SPT1              	100.00%
Bootstrap support for P0CR68 as seed ortholog is 100%.
Bootstrap support for F2SPT1 as seed ortholog is 100%.

Group of orthologs #2558. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubrum:117

Q5KDT5              	100.00%		F2SK23              	100.00%
Bootstrap support for Q5KDT5 as seed ortholog is 100%.
Bootstrap support for F2SK23 as seed ortholog is 100%.

Group of orthologs #2559. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubrum:117

Q5KQ14              	100.00%		F2SBQ3              	100.00%
Bootstrap support for Q5KQ14 as seed ortholog is 100%.
Bootstrap support for F2SBQ3 as seed ortholog is 100%.

Group of orthologs #2560. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubrum:117

Q5KAA8              	100.00%		F2ST11              	100.00%
Bootstrap support for Q5KAA8 as seed ortholog is 100%.
Bootstrap support for F2ST11 as seed ortholog is 100%.

Group of orthologs #2561. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubrum:117

Q5KPA8              	100.00%		F2SFW2              	100.00%
Bootstrap support for Q5KPA8 as seed ortholog is 100%.
Bootstrap support for F2SFW2 as seed ortholog is 100%.

Group of orthologs #2562. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubrum:117

Q5KJW6              	100.00%		F2SLS4              	100.00%
Bootstrap support for Q5KJW6 as seed ortholog is 100%.
Bootstrap support for F2SLS4 as seed ortholog is 100%.

Group of orthologs #2563. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubrum:117

Q5KBJ7              	100.00%		F2SV07              	100.00%
Bootstrap support for Q5KBJ7 as seed ortholog is 100%.
Bootstrap support for F2SV07 as seed ortholog is 100%.

Group of orthologs #2564. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubrum:117

Q5KJE8              	100.00%		F2SP45              	100.00%
Bootstrap support for Q5KJE8 as seed ortholog is 100%.
Bootstrap support for F2SP45 as seed ortholog is 100%.

Group of orthologs #2565. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubrum:117

Q5K9C9              	100.00%		F2SZC4              	100.00%
Bootstrap support for Q5K9C9 as seed ortholog is 100%.
Bootstrap support for F2SZC4 as seed ortholog is 100%.

Group of orthologs #2566. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubrum:117

Q5KDC0              	100.00%		F2T0Y1              	100.00%
Bootstrap support for Q5KDC0 as seed ortholog is 100%.
Bootstrap support for F2T0Y1 as seed ortholog is 100%.

Group of orthologs #2567. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubrum:117

Q5KH87              	100.00%		F2SZA3              	100.00%
Bootstrap support for Q5KH87 as seed ortholog is 100%.
Bootstrap support for F2SZA3 as seed ortholog is 100%.

Group of orthologs #2568. Best score 117 bits
Score difference with first non-orthologous sequence - C.neoformans:117 T.rubrum:117

Q5KNI5              	100.00%		F2SYA2              	100.00%
Bootstrap support for Q5KNI5 as seed ortholog is 100%.
Bootstrap support for F2SYA2 as seed ortholog is 100%.

Group of orthologs #2569. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubrum:116

Q5K7U2              	100.00%		F2SH37              	100.00%
Bootstrap support for Q5K7U2 as seed ortholog is 100%.
Bootstrap support for F2SH37 as seed ortholog is 100%.

Group of orthologs #2570. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubrum:116

Q5K9X2              	100.00%		F2SFR0              	100.00%
Bootstrap support for Q5K9X2 as seed ortholog is 100%.
Bootstrap support for F2SFR0 as seed ortholog is 100%.

Group of orthologs #2571. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubrum:116

Q5KAB9              	100.00%		F2SFX0              	100.00%
Bootstrap support for Q5KAB9 as seed ortholog is 100%.
Bootstrap support for F2SFX0 as seed ortholog is 100%.

Group of orthologs #2572. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubrum:116

Q5KCS6              	100.00%		F2SEL5              	100.00%
Bootstrap support for Q5KCS6 as seed ortholog is 100%.
Bootstrap support for F2SEL5 as seed ortholog is 100%.

Group of orthologs #2573. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubrum:116

Q5KEG7              	100.00%		F2SF32              	100.00%
Bootstrap support for Q5KEG7 as seed ortholog is 100%.
Bootstrap support for F2SF32 as seed ortholog is 100%.

Group of orthologs #2574. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubrum:116

Q5KKL9              	100.00%		F2SEL1              	100.00%
Bootstrap support for Q5KKL9 as seed ortholog is 100%.
Bootstrap support for F2SEL1 as seed ortholog is 100%.

Group of orthologs #2575. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubrum:66

Q5KKK4              	100.00%		F2SF56              	100.00%
Bootstrap support for Q5KKK4 as seed ortholog is 100%.
Bootstrap support for F2SF56 as seed ortholog is 99%.

Group of orthologs #2576. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubrum:116

Q5KPN1              	100.00%		F2SDC2              	100.00%
Bootstrap support for Q5KPN1 as seed ortholog is 100%.
Bootstrap support for F2SDC2 as seed ortholog is 100%.

Group of orthologs #2577. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubrum:116

Q5KPP4              	100.00%		F2SEQ7              	100.00%
Bootstrap support for Q5KPP4 as seed ortholog is 100%.
Bootstrap support for F2SEQ7 as seed ortholog is 100%.

Group of orthologs #2578. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubrum:116

Q5KBB9              	100.00%		F2SS84              	100.00%
Bootstrap support for Q5KBB9 as seed ortholog is 100%.
Bootstrap support for F2SS84 as seed ortholog is 100%.

Group of orthologs #2579. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubrum:116

Q5KL47              	100.00%		F2SIY4              	100.00%
Bootstrap support for Q5KL47 as seed ortholog is 100%.
Bootstrap support for F2SIY4 as seed ortholog is 100%.

Group of orthologs #2580. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubrum:116

Q5KGQ1              	100.00%		F2SSK0              	100.00%
Bootstrap support for Q5KGQ1 as seed ortholog is 100%.
Bootstrap support for F2SSK0 as seed ortholog is 100%.

Group of orthologs #2581. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubrum:116

Q5KKV0              	100.00%		F2SR44              	100.00%
Bootstrap support for Q5KKV0 as seed ortholog is 100%.
Bootstrap support for F2SR44 as seed ortholog is 100%.

Group of orthologs #2582. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubrum:116

Q5KL67              	100.00%		F2SSD5              	100.00%
Bootstrap support for Q5KL67 as seed ortholog is 100%.
Bootstrap support for F2SSD5 as seed ortholog is 100%.

Group of orthologs #2583. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubrum:116

Q5KJU3              	100.00%		F2SUN8              	100.00%
Bootstrap support for Q5KJU3 as seed ortholog is 100%.
Bootstrap support for F2SUN8 as seed ortholog is 100%.

Group of orthologs #2584. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubrum:116

Q5KL84              	100.00%		F2SXM8              	100.00%
Bootstrap support for Q5KL84 as seed ortholog is 100%.
Bootstrap support for F2SXM8 as seed ortholog is 100%.

Group of orthologs #2585. Best score 116 bits
Score difference with first non-orthologous sequence - C.neoformans:116 T.rubrum:116

Q5KMI4              	100.00%		F2T116              	100.00%
Bootstrap support for Q5KMI4 as seed ortholog is 100%.
Bootstrap support for F2T116 as seed ortholog is 100%.

Group of orthologs #2586. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 T.rubrum:115

Q5KDY6              	100.00%		F2SC10              	100.00%
Bootstrap support for Q5KDY6 as seed ortholog is 100%.
Bootstrap support for F2SC10 as seed ortholog is 100%.

Group of orthologs #2587. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 T.rubrum:115

Q5KF26              	100.00%		F2SHA0              	100.00%
Bootstrap support for Q5KF26 as seed ortholog is 100%.
Bootstrap support for F2SHA0 as seed ortholog is 100%.

Group of orthologs #2588. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 T.rubrum:115

Q5KNU7              	100.00%		F2SDG4              	100.00%
Bootstrap support for Q5KNU7 as seed ortholog is 100%.
Bootstrap support for F2SDG4 as seed ortholog is 100%.

Group of orthologs #2589. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 T.rubrum:56

Q5KIW3              	100.00%		F2SJR8              	100.00%
Bootstrap support for Q5KIW3 as seed ortholog is 100%.
Bootstrap support for F2SJR8 as seed ortholog is 99%.

Group of orthologs #2590. Best score 115 bits
Score difference with first non-orthologous sequence - C.neoformans:115 T.rubrum:115

Q5KNW5              	100.00%		F2SZ91              	100.00%
Bootstrap support for Q5KNW5 as seed ortholog is 100%.
Bootstrap support for F2SZ91 as seed ortholog is 100%.

Group of orthologs #2591. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubrum:70

Q5KEF1              	100.00%		F2SBZ0              	100.00%
Bootstrap support for Q5KEF1 as seed ortholog is 100%.
Bootstrap support for F2SBZ0 as seed ortholog is 99%.

Group of orthologs #2592. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubrum:114

Q5KBY4              	100.00%		F2SJX8              	100.00%
Bootstrap support for Q5KBY4 as seed ortholog is 100%.
Bootstrap support for F2SJX8 as seed ortholog is 100%.

Group of orthologs #2593. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubrum:114

Q5KCG7              	100.00%		F2SMT0              	100.00%
Bootstrap support for Q5KCG7 as seed ortholog is 100%.
Bootstrap support for F2SMT0 as seed ortholog is 100%.

Group of orthologs #2594. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubrum:114

Q5KI35              	100.00%		F2SI16              	100.00%
Bootstrap support for Q5KI35 as seed ortholog is 100%.
Bootstrap support for F2SI16 as seed ortholog is 100%.

Group of orthologs #2595. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubrum:114

Q5KMF4              	100.00%		F2SEP3              	100.00%
Bootstrap support for Q5KMF4 as seed ortholog is 100%.
Bootstrap support for F2SEP3 as seed ortholog is 100%.

Group of orthologs #2596. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubrum:114

Q5KBI9              	100.00%		F2SRW2              	100.00%
Bootstrap support for Q5KBI9 as seed ortholog is 100%.
Bootstrap support for F2SRW2 as seed ortholog is 100%.

Group of orthologs #2597. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubrum:114

Q5KJU6              	100.00%		F2SK77              	100.00%
Bootstrap support for Q5KJU6 as seed ortholog is 100%.
Bootstrap support for F2SK77 as seed ortholog is 100%.

Group of orthologs #2598. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubrum:114

Q5KL90              	100.00%		F2SJG8              	100.00%
Bootstrap support for Q5KL90 as seed ortholog is 100%.
Bootstrap support for F2SJG8 as seed ortholog is 100%.

Group of orthologs #2599. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubrum:114

Q5KMS2              	100.00%		F2SI72              	100.00%
Bootstrap support for Q5KMS2 as seed ortholog is 100%.
Bootstrap support for F2SI72 as seed ortholog is 100%.

Group of orthologs #2600. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubrum:114

Q5K7R5              	100.00%		F2SX35              	100.00%
Bootstrap support for Q5K7R5 as seed ortholog is 100%.
Bootstrap support for F2SX35 as seed ortholog is 100%.

Group of orthologs #2601. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubrum:114

Q5KI04              	100.00%		F2SS54              	100.00%
Bootstrap support for Q5KI04 as seed ortholog is 100%.
Bootstrap support for F2SS54 as seed ortholog is 100%.

Group of orthologs #2602. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubrum:114

Q5KNP8              	100.00%		F2SMY5              	100.00%
Bootstrap support for Q5KNP8 as seed ortholog is 100%.
Bootstrap support for F2SMY5 as seed ortholog is 100%.

Group of orthologs #2603. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubrum:114

Q5KI05              	100.00%		F2STI6              	100.00%
Bootstrap support for Q5KI05 as seed ortholog is 100%.
Bootstrap support for F2STI6 as seed ortholog is 100%.

Group of orthologs #2604. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubrum:114

Q5KPE6              	100.00%		F2SPV8              	100.00%
Bootstrap support for Q5KPE6 as seed ortholog is 100%.
Bootstrap support for F2SPV8 as seed ortholog is 100%.

Group of orthologs #2605. Best score 114 bits
Score difference with first non-orthologous sequence - C.neoformans:114 T.rubrum:114

Q5KGP1              	100.00%		F2T0H3              	100.00%
Bootstrap support for Q5KGP1 as seed ortholog is 100%.
Bootstrap support for F2T0H3 as seed ortholog is 100%.

Group of orthologs #2606. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubrum:113

Q5KEC0              	100.00%		F2SKQ1              	100.00%
Bootstrap support for Q5KEC0 as seed ortholog is 100%.
Bootstrap support for F2SKQ1 as seed ortholog is 100%.

Group of orthologs #2607. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:26 T.rubrum:113

P0CP96              	100.00%		F2STQ4              	100.00%
Bootstrap support for P0CP96 as seed ortholog is 89%.
Bootstrap support for F2STQ4 as seed ortholog is 100%.

Group of orthologs #2608. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubrum:113

Q5KB06              	100.00%		F2SQ27              	100.00%
Bootstrap support for Q5KB06 as seed ortholog is 100%.
Bootstrap support for F2SQ27 as seed ortholog is 100%.

Group of orthologs #2609. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubrum:113

Q5KDJ5              	100.00%		F2SRY4              	100.00%
Bootstrap support for Q5KDJ5 as seed ortholog is 100%.
Bootstrap support for F2SRY4 as seed ortholog is 100%.

Group of orthologs #2610. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubrum:113

Q5KJS7              	100.00%		F2SMK9              	100.00%
Bootstrap support for Q5KJS7 as seed ortholog is 100%.
Bootstrap support for F2SMK9 as seed ortholog is 100%.

Group of orthologs #2611. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubrum:113

Q5KID6              	100.00%		F2SP95              	100.00%
Bootstrap support for Q5KID6 as seed ortholog is 100%.
Bootstrap support for F2SP95 as seed ortholog is 100%.

Group of orthologs #2612. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubrum:113

Q5K9N9              	100.00%		F2SYZ5              	100.00%
Bootstrap support for Q5K9N9 as seed ortholog is 100%.
Bootstrap support for F2SYZ5 as seed ortholog is 100%.

Group of orthologs #2613. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubrum:113

Q5KIG9              	100.00%		F2SSM1              	100.00%
Bootstrap support for Q5KIG9 as seed ortholog is 100%.
Bootstrap support for F2SSM1 as seed ortholog is 100%.

Group of orthologs #2614. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubrum:113

Q5KET0              	100.00%		F2SYM4              	100.00%
Bootstrap support for Q5KET0 as seed ortholog is 100%.
Bootstrap support for F2SYM4 as seed ortholog is 100%.

Group of orthologs #2615. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubrum:113

Q5KHA7              	100.00%		F2SZA6              	100.00%
Bootstrap support for Q5KHA7 as seed ortholog is 100%.
Bootstrap support for F2SZA6 as seed ortholog is 100%.

Group of orthologs #2616. Best score 113 bits
Score difference with first non-orthologous sequence - C.neoformans:113 T.rubrum:113

Q5KKG0              	100.00%		F2SXI6              	100.00%
Bootstrap support for Q5KKG0 as seed ortholog is 100%.
Bootstrap support for F2SXI6 as seed ortholog is 100%.

Group of orthologs #2617. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubrum:112

Q5KE42              	100.00%		F2SFV1              	100.00%
Bootstrap support for Q5KE42 as seed ortholog is 100%.
Bootstrap support for F2SFV1 as seed ortholog is 100%.

Group of orthologs #2618. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubrum:112

Q5K991              	100.00%		F2SNN2              	100.00%
Bootstrap support for Q5K991 as seed ortholog is 100%.
Bootstrap support for F2SNN2 as seed ortholog is 100%.

Group of orthologs #2619. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubrum:112

Q5KBQ0              	100.00%		F2SQ21              	100.00%
Bootstrap support for Q5KBQ0 as seed ortholog is 100%.
Bootstrap support for F2SQ21 as seed ortholog is 100%.

Group of orthologs #2620. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubrum:112

P0CO68              	100.00%		F2SX05              	100.00%
Bootstrap support for P0CO68 as seed ortholog is 100%.
Bootstrap support for F2SX05 as seed ortholog is 100%.

Group of orthologs #2621. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubrum:112

Q5KPQ5              	100.00%		F2SFJ5              	100.00%
Bootstrap support for Q5KPQ5 as seed ortholog is 100%.
Bootstrap support for F2SFJ5 as seed ortholog is 100%.

Group of orthologs #2622. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubrum:112

Q5K8K2              	100.00%		F2SYJ2              	100.00%
Bootstrap support for Q5K8K2 as seed ortholog is 100%.
Bootstrap support for F2SYJ2 as seed ortholog is 100%.

Group of orthologs #2623. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubrum:112

Q5KEJ2              	100.00%		F2STS0              	100.00%
Bootstrap support for Q5KEJ2 as seed ortholog is 100%.
Bootstrap support for F2STS0 as seed ortholog is 100%.

Group of orthologs #2624. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubrum:112

Q5KKG4              	100.00%		F2SSC7              	100.00%
Bootstrap support for Q5KKG4 as seed ortholog is 100%.
Bootstrap support for F2SSC7 as seed ortholog is 100%.

Group of orthologs #2625. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubrum:112

Q5KFX3              	100.00%		F2SWQ8              	100.00%
Bootstrap support for Q5KFX3 as seed ortholog is 100%.
Bootstrap support for F2SWQ8 as seed ortholog is 100%.

Group of orthologs #2626. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubrum:112

Q5KI32              	100.00%		F2SXK4              	100.00%
Bootstrap support for Q5KI32 as seed ortholog is 100%.
Bootstrap support for F2SXK4 as seed ortholog is 100%.

Group of orthologs #2627. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubrum:112

Q5KME4              	100.00%		F2SU15              	100.00%
Bootstrap support for Q5KME4 as seed ortholog is 100%.
Bootstrap support for F2SU15 as seed ortholog is 100%.

Group of orthologs #2628. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:58 T.rubrum:112

Q5KJ91              	100.00%		F2SXP7              	100.00%
Bootstrap support for Q5KJ91 as seed ortholog is 91%.
Bootstrap support for F2SXP7 as seed ortholog is 100%.

Group of orthologs #2629. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubrum:112

Q5KMK2              	100.00%		F2SXI5              	100.00%
Bootstrap support for Q5KMK2 as seed ortholog is 100%.
Bootstrap support for F2SXI5 as seed ortholog is 100%.

Group of orthologs #2630. Best score 112 bits
Score difference with first non-orthologous sequence - C.neoformans:112 T.rubrum:112

Q5KJK9              	100.00%		F2T0V5              	100.00%
Bootstrap support for Q5KJK9 as seed ortholog is 100%.
Bootstrap support for F2T0V5 as seed ortholog is 100%.

Group of orthologs #2631. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 T.rubrum:111

P0CR84              	100.00%		F2SGF5              	100.00%
Bootstrap support for P0CR84 as seed ortholog is 100%.
Bootstrap support for F2SGF5 as seed ortholog is 100%.

Group of orthologs #2632. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 T.rubrum:111

Q5KDG2              	100.00%		F2SBM8              	100.00%
Bootstrap support for Q5KDG2 as seed ortholog is 100%.
Bootstrap support for F2SBM8 as seed ortholog is 100%.

Group of orthologs #2633. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 T.rubrum:111

Q5K8A6              	100.00%		F2SJR5              	100.00%
Bootstrap support for Q5K8A6 as seed ortholog is 100%.
Bootstrap support for F2SJR5 as seed ortholog is 100%.

Group of orthologs #2634. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 T.rubrum:111

Q5KH04              	100.00%		F2SC37              	100.00%
Bootstrap support for Q5KH04 as seed ortholog is 100%.
Bootstrap support for F2SC37 as seed ortholog is 100%.

Group of orthologs #2635. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 T.rubrum:111

Q5KF35              	100.00%		F2SDX4              	100.00%
Bootstrap support for Q5KF35 as seed ortholog is 100%.
Bootstrap support for F2SDX4 as seed ortholog is 100%.

Group of orthologs #2636. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 T.rubrum:111

Q5KFH7              	100.00%		F2SJI2              	100.00%
Bootstrap support for Q5KFH7 as seed ortholog is 100%.
Bootstrap support for F2SJI2 as seed ortholog is 100%.

Group of orthologs #2637. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 T.rubrum:111

P0CS10              	100.00%		F2SU63              	100.00%
Bootstrap support for P0CS10 as seed ortholog is 100%.
Bootstrap support for F2SU63 as seed ortholog is 100%.

Group of orthologs #2638. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 T.rubrum:111

Q5KC36              	100.00%		F2SS79              	100.00%
Bootstrap support for Q5KC36 as seed ortholog is 100%.
Bootstrap support for F2SS79 as seed ortholog is 100%.

Group of orthologs #2639. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 T.rubrum:111

Q5KBB0              	100.00%		F2SV71              	100.00%
Bootstrap support for Q5KBB0 as seed ortholog is 100%.
Bootstrap support for F2SV71 as seed ortholog is 100%.

Group of orthologs #2640. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 T.rubrum:111

Q5KN66              	100.00%		F2SM73              	100.00%
Bootstrap support for Q5KN66 as seed ortholog is 100%.
Bootstrap support for F2SM73 as seed ortholog is 100%.

Group of orthologs #2641. Best score 111 bits
Score difference with first non-orthologous sequence - C.neoformans:111 T.rubrum:111

Q5KGV2              	100.00%		F2SYT6              	100.00%
Bootstrap support for Q5KGV2 as seed ortholog is 100%.
Bootstrap support for F2SYT6 as seed ortholog is 100%.

Group of orthologs #2642. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:7 T.rubrum:21

Q5KMT1              	100.00%		F2SYM1              	100.00%
                    	       		F2SWS5              	39.58%
Bootstrap support for Q5KMT1 as seed ortholog is 62%.
Alternative seed ortholog is Q5KLF1 (7 bits away from this cluster)
Bootstrap support for F2SYM1 as seed ortholog is 87%.

Group of orthologs #2643. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 T.rubrum:110

Q5KI87              	100.00%		F2SCJ5              	100.00%
Bootstrap support for Q5KI87 as seed ortholog is 100%.
Bootstrap support for F2SCJ5 as seed ortholog is 100%.

Group of orthologs #2644. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 T.rubrum:110

Q5KIH8              	100.00%		F2SGL7              	100.00%
Bootstrap support for Q5KIH8 as seed ortholog is 100%.
Bootstrap support for F2SGL7 as seed ortholog is 100%.

Group of orthologs #2645. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 T.rubrum:110

Q5KCS0              	100.00%		F2SM81              	100.00%
Bootstrap support for Q5KCS0 as seed ortholog is 100%.
Bootstrap support for F2SM81 as seed ortholog is 100%.

Group of orthologs #2646. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 T.rubrum:110

Q5KL55              	100.00%		F2SFN2              	100.00%
Bootstrap support for Q5KL55 as seed ortholog is 100%.
Bootstrap support for F2SFN2 as seed ortholog is 100%.

Group of orthologs #2647. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 T.rubrum:110

Q5KGP8              	100.00%		F2SNR2              	100.00%
Bootstrap support for Q5KGP8 as seed ortholog is 100%.
Bootstrap support for F2SNR2 as seed ortholog is 100%.

Group of orthologs #2648. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 T.rubrum:110

Q5KM32              	100.00%		F2SKB7              	100.00%
Bootstrap support for Q5KM32 as seed ortholog is 100%.
Bootstrap support for F2SKB7 as seed ortholog is 100%.

Group of orthologs #2649. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 T.rubrum:110

Q5KJN0              	100.00%		F2SPW3              	100.00%
Bootstrap support for Q5KJN0 as seed ortholog is 100%.
Bootstrap support for F2SPW3 as seed ortholog is 100%.

Group of orthologs #2650. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 T.rubrum:110

Q5KDZ7              	100.00%		F2SVK5              	100.00%
Bootstrap support for Q5KDZ7 as seed ortholog is 100%.
Bootstrap support for F2SVK5 as seed ortholog is 100%.

Group of orthologs #2651. Best score 110 bits
Score difference with first non-orthologous sequence - C.neoformans:110 T.rubrum:110

Q5KJJ0              	100.00%		F2SVI0              	100.00%
Bootstrap support for Q5KJJ0 as seed ortholog is 100%.
Bootstrap support for F2SVI0 as seed ortholog is 100%.

Group of orthologs #2652. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:17 T.rubrum:36

Q5KLN7              	100.00%		F2SNB1              	100.00%
Q5KLN8              	56.53%		
Bootstrap support for Q5KLN7 as seed ortholog is 70%.
Alternative seed ortholog is Q5KF03 (17 bits away from this cluster)
Bootstrap support for F2SNB1 as seed ortholog is 84%.

Group of orthologs #2653. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubrum:109

Q5KAU1              	100.00%		F2SEQ8              	100.00%
Bootstrap support for Q5KAU1 as seed ortholog is 100%.
Bootstrap support for F2SEQ8 as seed ortholog is 100%.

Group of orthologs #2654. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubrum:109

Q5KE76              	100.00%		F2SCE0              	100.00%
Bootstrap support for Q5KE76 as seed ortholog is 100%.
Bootstrap support for F2SCE0 as seed ortholog is 100%.

Group of orthologs #2655. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubrum:109

Q5KFG1              	100.00%		F2SDD4              	100.00%
Bootstrap support for Q5KFG1 as seed ortholog is 100%.
Bootstrap support for F2SDD4 as seed ortholog is 100%.

Group of orthologs #2656. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubrum:109

Q5KJ07              	100.00%		F2SCB9              	100.00%
Bootstrap support for Q5KJ07 as seed ortholog is 100%.
Bootstrap support for F2SCB9 as seed ortholog is 100%.

Group of orthologs #2657. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubrum:109

Q5KI30              	100.00%		F2SDS8              	100.00%
Bootstrap support for Q5KI30 as seed ortholog is 96%.
Bootstrap support for F2SDS8 as seed ortholog is 100%.

Group of orthologs #2658. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubrum:109

P0CN02              	100.00%		F2SRU3              	100.00%
Bootstrap support for P0CN02 as seed ortholog is 100%.
Bootstrap support for F2SRU3 as seed ortholog is 100%.

Group of orthologs #2659. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:8 T.rubrum:109

Q5KFD1              	100.00%		F2SIL5              	100.00%
Bootstrap support for Q5KFD1 as seed ortholog is 67%.
Alternative seed ortholog is Q5KFN1 (8 bits away from this cluster)
Bootstrap support for F2SIL5 as seed ortholog is 100%.

Group of orthologs #2660. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubrum:109

Q5K8I2              	100.00%		F2SRP3              	100.00%
Bootstrap support for Q5K8I2 as seed ortholog is 100%.
Bootstrap support for F2SRP3 as seed ortholog is 100%.

Group of orthologs #2661. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubrum:52

Q5KQ37              	100.00%		F2SCB5              	100.00%
Bootstrap support for Q5KQ37 as seed ortholog is 100%.
Bootstrap support for F2SCB5 as seed ortholog is 99%.

Group of orthologs #2662. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubrum:109

Q5KE19              	100.00%		F2SUE5              	100.00%
Bootstrap support for Q5KE19 as seed ortholog is 100%.
Bootstrap support for F2SUE5 as seed ortholog is 100%.

Group of orthologs #2663. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubrum:109

Q5KF14              	100.00%		F2SUV6              	100.00%
Bootstrap support for Q5KF14 as seed ortholog is 100%.
Bootstrap support for F2SUV6 as seed ortholog is 100%.

Group of orthologs #2664. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubrum:109

Q5KKW4              	100.00%		F2SPQ8              	100.00%
Bootstrap support for Q5KKW4 as seed ortholog is 100%.
Bootstrap support for F2SPQ8 as seed ortholog is 100%.

Group of orthologs #2665. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubrum:109

Q5KAC8              	100.00%		F2SZA5              	100.00%
Bootstrap support for Q5KAC8 as seed ortholog is 100%.
Bootstrap support for F2SZA5 as seed ortholog is 100%.

Group of orthologs #2666. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubrum:109

Q5KKD7              	100.00%		F2SQH2              	100.00%
Bootstrap support for Q5KKD7 as seed ortholog is 100%.
Bootstrap support for F2SQH2 as seed ortholog is 100%.

Group of orthologs #2667. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubrum:109

Q5KE66              	100.00%		F2SXB9              	100.00%
Bootstrap support for Q5KE66 as seed ortholog is 100%.
Bootstrap support for F2SXB9 as seed ortholog is 100%.

Group of orthologs #2668. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubrum:109

Q5KMV9              	100.00%		F2SUK7              	100.00%
Bootstrap support for Q5KMV9 as seed ortholog is 100%.
Bootstrap support for F2SUK7 as seed ortholog is 100%.

Group of orthologs #2669. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubrum:109

Q5KPB2              	100.00%		F2SUH0              	100.00%
Bootstrap support for Q5KPB2 as seed ortholog is 100%.
Bootstrap support for F2SUH0 as seed ortholog is 100%.

Group of orthologs #2670. Best score 109 bits
Score difference with first non-orthologous sequence - C.neoformans:109 T.rubrum:109

Q5KIV2              	100.00%		F2T101              	100.00%
Bootstrap support for Q5KIV2 as seed ortholog is 100%.
Bootstrap support for F2T101 as seed ortholog is 100%.

Group of orthologs #2671. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 T.rubrum:108

Q5KGV4              	100.00%		F2SFU9              	100.00%
Bootstrap support for Q5KGV4 as seed ortholog is 100%.
Bootstrap support for F2SFU9 as seed ortholog is 100%.

Group of orthologs #2672. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 T.rubrum:108

Q5KHI2              	100.00%		F2SHI3              	100.00%
Bootstrap support for Q5KHI2 as seed ortholog is 100%.
Bootstrap support for F2SHI3 as seed ortholog is 100%.

Group of orthologs #2673. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 T.rubrum:108

P0CQ54              	100.00%		F2STY4              	100.00%
Bootstrap support for P0CQ54 as seed ortholog is 100%.
Bootstrap support for F2STY4 as seed ortholog is 100%.

Group of orthologs #2674. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 T.rubrum:108

Q5KLV4              	100.00%		F2SNG6              	100.00%
Bootstrap support for Q5KLV4 as seed ortholog is 100%.
Bootstrap support for F2SNG6 as seed ortholog is 100%.

Group of orthologs #2675. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 T.rubrum:108

Q5KGT2              	100.00%		F2SYK0              	100.00%
Bootstrap support for Q5KGT2 as seed ortholog is 100%.
Bootstrap support for F2SYK0 as seed ortholog is 100%.

Group of orthologs #2676. Best score 108 bits
Score difference with first non-orthologous sequence - C.neoformans:108 T.rubrum:108

Q5KP19              	100.00%		F2SSE6              	100.00%
Bootstrap support for Q5KP19 as seed ortholog is 100%.
Bootstrap support for F2SSE6 as seed ortholog is 100%.

Group of orthologs #2677. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 T.rubrum:107

P0CS18              	100.00%		F2SC19              	100.00%
Bootstrap support for P0CS18 as seed ortholog is 100%.
Bootstrap support for F2SC19 as seed ortholog is 100%.

Group of orthologs #2678. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 T.rubrum:107

Q5KC16              	100.00%		F2SDA4              	100.00%
Bootstrap support for Q5KC16 as seed ortholog is 100%.
Bootstrap support for F2SDA4 as seed ortholog is 100%.

Group of orthologs #2679. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 T.rubrum:107

Q5K8A9              	100.00%		F2SLQ5              	100.00%
Bootstrap support for Q5K8A9 as seed ortholog is 100%.
Bootstrap support for F2SLQ5 as seed ortholog is 100%.

Group of orthologs #2680. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 T.rubrum:107

Q5K801              	100.00%		F2SR38              	100.00%
Bootstrap support for Q5K801 as seed ortholog is 100%.
Bootstrap support for F2SR38 as seed ortholog is 100%.

Group of orthologs #2681. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 T.rubrum:107

Q5KN27              	100.00%		F2SDX5              	100.00%
Bootstrap support for Q5KN27 as seed ortholog is 100%.
Bootstrap support for F2SDX5 as seed ortholog is 100%.

Group of orthologs #2682. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 T.rubrum:107

Q5KG40              	100.00%		F2SLB3              	100.00%
Bootstrap support for Q5KG40 as seed ortholog is 100%.
Bootstrap support for F2SLB3 as seed ortholog is 100%.

Group of orthologs #2683. Best score 107 bits
Score difference with first non-orthologous sequence - C.neoformans:107 T.rubrum:107

Q5KF20              	100.00%		F2SPL5              	100.00%
Bootstrap support for Q5KF20 as seed ortholog is 100%.
Bootstrap support for F2SPL5 as seed ortholog is 100%.

Group of orthologs #2684. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubrum:106

Q5K9W5              	100.00%		F2SNY0              	100.00%
Bootstrap support for Q5K9W5 as seed ortholog is 100%.
Bootstrap support for F2SNY0 as seed ortholog is 100%.

Group of orthologs #2685. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubrum:106

Q5KPD3              	100.00%		F2SFK0              	100.00%
Bootstrap support for Q5KPD3 as seed ortholog is 100%.
Bootstrap support for F2SFK0 as seed ortholog is 100%.

Group of orthologs #2686. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubrum:106

Q5KNF3              	100.00%		F2SIX8              	100.00%
Bootstrap support for Q5KNF3 as seed ortholog is 100%.
Bootstrap support for F2SIX8 as seed ortholog is 100%.

Group of orthologs #2687. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubrum:106

Q5KEQ1              	100.00%		F2SSP8              	100.00%
Bootstrap support for Q5KEQ1 as seed ortholog is 100%.
Bootstrap support for F2SSP8 as seed ortholog is 100%.

Group of orthologs #2688. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubrum:106

Q5K7Y3              	100.00%		F2T0V8              	100.00%
Bootstrap support for Q5K7Y3 as seed ortholog is 100%.
Bootstrap support for F2T0V8 as seed ortholog is 100%.

Group of orthologs #2689. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubrum:106

Q5KIT3              	100.00%		F2SRN3              	100.00%
Bootstrap support for Q5KIT3 as seed ortholog is 100%.
Bootstrap support for F2SRN3 as seed ortholog is 100%.

Group of orthologs #2690. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubrum:106

Q5KJM9              	100.00%		F2SSJ6              	100.00%
Bootstrap support for Q5KJM9 as seed ortholog is 100%.
Bootstrap support for F2SSJ6 as seed ortholog is 100%.

Group of orthologs #2691. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubrum:106

Q5KFU1              	100.00%		F2SXQ6              	100.00%
Bootstrap support for Q5KFU1 as seed ortholog is 100%.
Bootstrap support for F2SXQ6 as seed ortholog is 100%.

Group of orthologs #2692. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubrum:106

Q5KI51              	100.00%		F2SWC5              	100.00%
Bootstrap support for Q5KI51 as seed ortholog is 100%.
Bootstrap support for F2SWC5 as seed ortholog is 100%.

Group of orthologs #2693. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:5 T.rubrum:106

Q5KPV0              	100.00%		F2STW2              	100.00%
Bootstrap support for Q5KPV0 as seed ortholog is 94%.
Bootstrap support for F2STW2 as seed ortholog is 100%.

Group of orthologs #2694. Best score 106 bits
Score difference with first non-orthologous sequence - C.neoformans:106 T.rubrum:106

Q5KHG1              	100.00%		F2T0W4              	100.00%
Bootstrap support for Q5KHG1 as seed ortholog is 100%.
Bootstrap support for F2T0W4 as seed ortholog is 100%.

Group of orthologs #2695. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 T.rubrum:105

Q5K7E8              	100.00%		F2SGA8              	100.00%
Bootstrap support for Q5K7E8 as seed ortholog is 100%.
Bootstrap support for F2SGA8 as seed ortholog is 100%.

Group of orthologs #2696. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 T.rubrum:105

P0CO30              	100.00%		F2SUC6              	100.00%
Bootstrap support for P0CO30 as seed ortholog is 100%.
Bootstrap support for F2SUC6 as seed ortholog is 100%.

Group of orthologs #2697. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 T.rubrum:105

Q5KKU9              	100.00%		F2SG50              	100.00%
Bootstrap support for Q5KKU9 as seed ortholog is 100%.
Bootstrap support for F2SG50 as seed ortholog is 100%.

Group of orthologs #2698. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 T.rubrum:105

Q5K8K6              	100.00%		F2STV2              	100.00%
Bootstrap support for Q5K8K6 as seed ortholog is 100%.
Bootstrap support for F2STV2 as seed ortholog is 100%.

Group of orthologs #2699. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 T.rubrum:105

Q5KLY6              	100.00%		F2SHW8              	100.00%
Bootstrap support for Q5KLY6 as seed ortholog is 100%.
Bootstrap support for F2SHW8 as seed ortholog is 100%.

Group of orthologs #2700. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 T.rubrum:105

Q5KPJ3              	100.00%		F2SGS3              	100.00%
Bootstrap support for Q5KPJ3 as seed ortholog is 100%.
Bootstrap support for F2SGS3 as seed ortholog is 100%.

Group of orthologs #2701. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 T.rubrum:105

Q5KGC6              	100.00%		F2SPV6              	100.00%
Bootstrap support for Q5KGC6 as seed ortholog is 100%.
Bootstrap support for F2SPV6 as seed ortholog is 100%.

Group of orthologs #2702. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:61 T.rubrum:105

Q5K9Y9              	100.00%		F2SVU2              	100.00%
Bootstrap support for Q5K9Y9 as seed ortholog is 96%.
Bootstrap support for F2SVU2 as seed ortholog is 100%.

Group of orthologs #2703. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 T.rubrum:105

Q5K900              	100.00%		F2SWQ6              	100.00%
Bootstrap support for Q5K900 as seed ortholog is 100%.
Bootstrap support for F2SWQ6 as seed ortholog is 100%.

Group of orthologs #2704. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 T.rubrum:105

Q5K9L4              	100.00%		F2SWK8              	100.00%
Bootstrap support for Q5K9L4 as seed ortholog is 100%.
Bootstrap support for F2SWK8 as seed ortholog is 100%.

Group of orthologs #2705. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:105 T.rubrum:105

Q5KGZ8              	100.00%		F2SX83              	100.00%
Bootstrap support for Q5KGZ8 as seed ortholog is 100%.
Bootstrap support for F2SX83 as seed ortholog is 100%.

Group of orthologs #2706. Best score 105 bits
Score difference with first non-orthologous sequence - C.neoformans:42 T.rubrum:105

Q5KNS6              	100.00%		F2SXC5              	100.00%
Bootstrap support for Q5KNS6 as seed ortholog is 89%.
Bootstrap support for F2SXC5 as seed ortholog is 100%.

Group of orthologs #2707. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 T.rubrum:104

Q5KCD0              	100.00%		F2SU14              	100.00%
Bootstrap support for Q5KCD0 as seed ortholog is 100%.
Bootstrap support for F2SU14 as seed ortholog is 100%.

Group of orthologs #2708. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 T.rubrum:104

Q5KG74              	100.00%		F2SRM4              	100.00%
Bootstrap support for Q5KG74 as seed ortholog is 100%.
Bootstrap support for F2SRM4 as seed ortholog is 100%.

Group of orthologs #2709. Best score 104 bits
Score difference with first non-orthologous sequence - C.neoformans:104 T.rubrum:104

Q5KLI8              	100.00%		F2SPH6              	100.00%
Bootstrap support for Q5KLI8 as seed ortholog is 100%.
Bootstrap support for F2SPH6 as seed ortholog is 100%.

Group of orthologs #2710. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 T.rubrum:103

Q5KKA8              	100.00%		F2SV63              	100.00%
Q5KKA7              	37.95%		F2SLP8              	6.23%
Bootstrap support for Q5KKA8 as seed ortholog is 100%.
Bootstrap support for F2SV63 as seed ortholog is 100%.

Group of orthologs #2711. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 T.rubrum:103

Q5K963              	100.00%		F2SS23              	100.00%
Q5K962              	47.52%		
Bootstrap support for Q5K963 as seed ortholog is 100%.
Bootstrap support for F2SS23 as seed ortholog is 100%.

Group of orthologs #2712. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 T.rubrum:103

Q5KEG9              	100.00%		F2SJ06              	100.00%
Bootstrap support for Q5KEG9 as seed ortholog is 100%.
Bootstrap support for F2SJ06 as seed ortholog is 100%.

Group of orthologs #2713. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 T.rubrum:103

Q5KIL0              	100.00%		F2SM35              	100.00%
Bootstrap support for Q5KIL0 as seed ortholog is 100%.
Bootstrap support for F2SM35 as seed ortholog is 100%.

Group of orthologs #2714. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 T.rubrum:103

P0CQ28              	100.00%		F2SYW4              	100.00%
Bootstrap support for P0CQ28 as seed ortholog is 100%.
Bootstrap support for F2SYW4 as seed ortholog is 100%.

Group of orthologs #2715. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 T.rubrum:103

Q5K8R9              	100.00%		F2SXU5              	100.00%
Bootstrap support for Q5K8R9 as seed ortholog is 100%.
Bootstrap support for F2SXU5 as seed ortholog is 100%.

Group of orthologs #2716. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 T.rubrum:103

Q5K9D6              	100.00%		F2SYJ7              	100.00%
Bootstrap support for Q5K9D6 as seed ortholog is 100%.
Bootstrap support for F2SYJ7 as seed ortholog is 100%.

Group of orthologs #2717. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 T.rubrum:27

Q5KQ64              	100.00%		F2SNL3              	100.00%
Bootstrap support for Q5KQ64 as seed ortholog is 100%.
Bootstrap support for F2SNL3 as seed ortholog is 71%.
Alternative seed ortholog is F2SJ83 (27 bits away from this cluster)

Group of orthologs #2718. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:103 T.rubrum:103

Q5KJW8              	100.00%		F2SW89              	100.00%
Bootstrap support for Q5KJW8 as seed ortholog is 100%.
Bootstrap support for F2SW89 as seed ortholog is 100%.

Group of orthologs #2719. Best score 103 bits
Score difference with first non-orthologous sequence - C.neoformans:8 T.rubrum:103

Q5KM61              	100.00%		F2SX08              	100.00%
Bootstrap support for Q5KM61 as seed ortholog is 99%.
Bootstrap support for F2SX08 as seed ortholog is 100%.

Group of orthologs #2720. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubrum:102

Q5KB15              	100.00%		F2SWW3              	100.00%
Q5KE31              	26.70%		
Bootstrap support for Q5KB15 as seed ortholog is 100%.
Bootstrap support for F2SWW3 as seed ortholog is 100%.

Group of orthologs #2721. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubrum:102

Q5KDJ4              	100.00%		F2SBL4              	100.00%
Bootstrap support for Q5KDJ4 as seed ortholog is 100%.
Bootstrap support for F2SBL4 as seed ortholog is 100%.

Group of orthologs #2722. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubrum:102

Q5KAQ1              	100.00%		F2SHU5              	100.00%
Bootstrap support for Q5KAQ1 as seed ortholog is 100%.
Bootstrap support for F2SHU5 as seed ortholog is 100%.

Group of orthologs #2723. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubrum:102

Q5KIK2              	100.00%		F2SEE7              	100.00%
Bootstrap support for Q5KIK2 as seed ortholog is 100%.
Bootstrap support for F2SEE7 as seed ortholog is 100%.

Group of orthologs #2724. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubrum:102

Q5KGS4              	100.00%		F2SJI4              	100.00%
Bootstrap support for Q5KGS4 as seed ortholog is 100%.
Bootstrap support for F2SJI4 as seed ortholog is 100%.

Group of orthologs #2725. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubrum:102

P0CR20              	100.00%		F2SVK8              	100.00%
Bootstrap support for P0CR20 as seed ortholog is 100%.
Bootstrap support for F2SVK8 as seed ortholog is 100%.

Group of orthologs #2726. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubrum:102

Q5KK14              	100.00%		F2SJ49              	100.00%
Bootstrap support for Q5KK14 as seed ortholog is 100%.
Bootstrap support for F2SJ49 as seed ortholog is 100%.

Group of orthologs #2727. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubrum:102

P0CN22              	100.00%		F2SX60              	100.00%
Bootstrap support for P0CN22 as seed ortholog is 100%.
Bootstrap support for F2SX60 as seed ortholog is 100%.

Group of orthologs #2728. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubrum:102

Q5KBY2              	100.00%		F2SSF0              	100.00%
Bootstrap support for Q5KBY2 as seed ortholog is 100%.
Bootstrap support for F2SSF0 as seed ortholog is 100%.

Group of orthologs #2729. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubrum:102

Q5KB29              	100.00%		F2T022              	100.00%
Bootstrap support for Q5KB29 as seed ortholog is 100%.
Bootstrap support for F2T022 as seed ortholog is 100%.

Group of orthologs #2730. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubrum:102

Q5KP55              	100.00%		F2SP57              	100.00%
Bootstrap support for Q5KP55 as seed ortholog is 100%.
Bootstrap support for F2SP57 as seed ortholog is 100%.

Group of orthologs #2731. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubrum:102

Q5KNR5              	100.00%		F2SVP8              	100.00%
Bootstrap support for Q5KNR5 as seed ortholog is 100%.
Bootstrap support for F2SVP8 as seed ortholog is 100%.

Group of orthologs #2732. Best score 102 bits
Score difference with first non-orthologous sequence - C.neoformans:102 T.rubrum:102

Q5KJM2              	100.00%		F2T161              	100.00%
Bootstrap support for Q5KJM2 as seed ortholog is 100%.
Bootstrap support for F2T161 as seed ortholog is 100%.

Group of orthologs #2733. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 T.rubrum:101

Q5KHJ3              	100.00%		F2SGB4              	100.00%
Bootstrap support for Q5KHJ3 as seed ortholog is 100%.
Bootstrap support for F2SGB4 as seed ortholog is 100%.

Group of orthologs #2734. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 T.rubrum:101

Q5KAG4              	100.00%		F2SNQ2              	100.00%
Bootstrap support for Q5KAG4 as seed ortholog is 100%.
Bootstrap support for F2SNQ2 as seed ortholog is 100%.

Group of orthologs #2735. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 T.rubrum:101

Q5KIY8              	100.00%		F2SGE4              	100.00%
Bootstrap support for Q5KIY8 as seed ortholog is 100%.
Bootstrap support for F2SGE4 as seed ortholog is 100%.

Group of orthologs #2736. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 T.rubrum:101

Q5KMZ6              	100.00%		F2SE03              	100.00%
Bootstrap support for Q5KMZ6 as seed ortholog is 100%.
Bootstrap support for F2SE03 as seed ortholog is 100%.

Group of orthologs #2737. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 T.rubrum:101

Q5KJY3              	100.00%		F2SJB8              	100.00%
Bootstrap support for Q5KJY3 as seed ortholog is 100%.
Bootstrap support for F2SJB8 as seed ortholog is 100%.

Group of orthologs #2738. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 T.rubrum:101

Q5KB75              	100.00%		F2SUD8              	100.00%
Bootstrap support for Q5KB75 as seed ortholog is 100%.
Bootstrap support for F2SUD8 as seed ortholog is 100%.

Group of orthologs #2739. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 T.rubrum:101

Q5KHF7              	100.00%		F2SQQ2              	100.00%
Bootstrap support for Q5KHF7 as seed ortholog is 100%.
Bootstrap support for F2SQQ2 as seed ortholog is 100%.

Group of orthologs #2740. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 T.rubrum:101

Q5KP23              	100.00%		F2SR66              	100.00%
Bootstrap support for Q5KP23 as seed ortholog is 100%.
Bootstrap support for F2SR66 as seed ortholog is 100%.

Group of orthologs #2741. Best score 101 bits
Score difference with first non-orthologous sequence - C.neoformans:101 T.rubrum:101

Q5KMK6              	100.00%		F2SVP7              	100.00%
Bootstrap support for Q5KMK6 as seed ortholog is 100%.
Bootstrap support for F2SVP7 as seed ortholog is 100%.

Group of orthologs #2742. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:2 T.rubrum:100

Q5K7W6              	100.00%		F2SXP6              	100.00%
Q5KMH5              	7.58%		
Q5K7Z1              	6.70%		
Bootstrap support for Q5K7W6 as seed ortholog is 47%.
Alternative seed ortholog is Q5KQ90 (2 bits away from this cluster)
Bootstrap support for F2SXP6 as seed ortholog is 100%.

Group of orthologs #2743. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubrum:100

P0CN54              	100.00%		F2SED3              	100.00%
Bootstrap support for P0CN54 as seed ortholog is 100%.
Bootstrap support for F2SED3 as seed ortholog is 100%.

Group of orthologs #2744. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubrum:100

P0CM90              	100.00%		F2SHR8              	100.00%
Bootstrap support for P0CM90 as seed ortholog is 100%.
Bootstrap support for F2SHR8 as seed ortholog is 100%.

Group of orthologs #2745. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubrum:100

Q5KB27              	100.00%		F2SGH5              	100.00%
Bootstrap support for Q5KB27 as seed ortholog is 100%.
Bootstrap support for F2SGH5 as seed ortholog is 100%.

Group of orthologs #2746. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubrum:100

Q5KFE6              	100.00%		F2SDV0              	100.00%
Bootstrap support for Q5KFE6 as seed ortholog is 100%.
Bootstrap support for F2SDV0 as seed ortholog is 100%.

Group of orthologs #2747. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubrum:100

Q5KH00              	100.00%		F2SGG1              	100.00%
Bootstrap support for Q5KH00 as seed ortholog is 100%.
Bootstrap support for F2SGG1 as seed ortholog is 100%.

Group of orthologs #2748. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubrum:100

Q5KNQ0              	100.00%		F2SF42              	100.00%
Bootstrap support for Q5KNQ0 as seed ortholog is 100%.
Bootstrap support for F2SF42 as seed ortholog is 100%.

Group of orthologs #2749. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubrum:100

Q5KKG8              	100.00%		F2SUB9              	100.00%
Bootstrap support for Q5KKG8 as seed ortholog is 100%.
Bootstrap support for F2SUB9 as seed ortholog is 100%.

Group of orthologs #2750. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubrum:100

Q5KG70              	100.00%		F2T027              	100.00%
Bootstrap support for Q5KG70 as seed ortholog is 100%.
Bootstrap support for F2T027 as seed ortholog is 100%.

Group of orthologs #2751. Best score 100 bits
Score difference with first non-orthologous sequence - C.neoformans:100 T.rubrum:100

Q5KP22              	100.00%		F2SZZ5              	100.00%
Bootstrap support for Q5KP22 as seed ortholog is 100%.
Bootstrap support for F2SZZ5 as seed ortholog is 100%.

Group of orthologs #2752. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubrum:37

Q5KHA9              	100.00%		F2SLQ2              	100.00%
                    	       		F2SVW9              	15.20%
                    	       		F2SFB4              	14.45%
                    	       		F2SIR5              	7.69%
Bootstrap support for Q5KHA9 as seed ortholog is 100%.
Bootstrap support for F2SLQ2 as seed ortholog is 86%.

Group of orthologs #2753. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubrum:99

Q5KI21              	100.00%		F2SCP3              	100.00%
Bootstrap support for Q5KI21 as seed ortholog is 100%.
Bootstrap support for F2SCP3 as seed ortholog is 100%.

Group of orthologs #2754. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubrum:99

Q5KCS9              	100.00%		F2SHY4              	100.00%
Bootstrap support for Q5KCS9 as seed ortholog is 100%.
Bootstrap support for F2SHY4 as seed ortholog is 100%.

Group of orthologs #2755. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubrum:99

Q5KFV3              	100.00%		F2SJC6              	100.00%
Bootstrap support for Q5KFV3 as seed ortholog is 100%.
Bootstrap support for F2SJC6 as seed ortholog is 100%.

Group of orthologs #2756. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubrum:99

Q5KIL3              	100.00%		F2SH19              	100.00%
Bootstrap support for Q5KIL3 as seed ortholog is 100%.
Bootstrap support for F2SH19 as seed ortholog is 100%.

Group of orthologs #2757. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubrum:99

Q5KHC7              	100.00%		F2SIV2              	100.00%
Bootstrap support for Q5KHC7 as seed ortholog is 100%.
Bootstrap support for F2SIV2 as seed ortholog is 100%.

Group of orthologs #2758. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubrum:99

Q5K845              	100.00%		F2SWM8              	100.00%
Bootstrap support for Q5K845 as seed ortholog is 100%.
Bootstrap support for F2SWM8 as seed ortholog is 100%.

Group of orthologs #2759. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubrum:99

Q5KPH9              	100.00%		F2SKN0              	100.00%
Bootstrap support for Q5KPH9 as seed ortholog is 100%.
Bootstrap support for F2SKN0 as seed ortholog is 100%.

Group of orthologs #2760. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:48 T.rubrum:44

Q5KIE5              	100.00%		F2SSF1              	100.00%
Bootstrap support for Q5KIE5 as seed ortholog is 99%.
Bootstrap support for F2SSF1 as seed ortholog is 98%.

Group of orthologs #2761. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubrum:99

Q5KP80              	100.00%		F2SN75              	100.00%
Bootstrap support for Q5KP80 as seed ortholog is 100%.
Bootstrap support for F2SN75 as seed ortholog is 100%.

Group of orthologs #2762. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubrum:99

Q5KFG8              	100.00%		F2T0C9              	100.00%
Bootstrap support for Q5KFG8 as seed ortholog is 100%.
Bootstrap support for F2T0C9 as seed ortholog is 100%.

Group of orthologs #2763. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:99 T.rubrum:99

Q5KKZ1              	100.00%		F2SVH1              	100.00%
Bootstrap support for Q5KKZ1 as seed ortholog is 100%.
Bootstrap support for F2SVH1 as seed ortholog is 100%.

Group of orthologs #2764. Best score 99 bits
Score difference with first non-orthologous sequence - C.neoformans:35 T.rubrum:99

Q5KPW5              	100.00%		F2SW58              	100.00%
Bootstrap support for Q5KPW5 as seed ortholog is 81%.
Bootstrap support for F2SW58 as seed ortholog is 100%.

Group of orthologs #2765. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 T.rubrum:98

Q5KEH9              	100.00%		F2SDX0              	100.00%
                    	       		F2SL86              	7.38%
Bootstrap support for Q5KEH9 as seed ortholog is 100%.
Bootstrap support for F2SDX0 as seed ortholog is 100%.

Group of orthologs #2766. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 T.rubrum:98

Q5KBC2              	100.00%		F2SHJ9              	100.00%
Q5KJU5              	20.30%		
Bootstrap support for Q5KBC2 as seed ortholog is 100%.
Bootstrap support for F2SHJ9 as seed ortholog is 100%.

Group of orthologs #2767. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 T.rubrum:98

P0CQ48              	100.00%		F2SMR0              	100.00%
Bootstrap support for P0CQ48 as seed ortholog is 100%.
Bootstrap support for F2SMR0 as seed ortholog is 100%.

Group of orthologs #2768. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 T.rubrum:98

Q5KJJ5              	100.00%		F2SDK5              	100.00%
Bootstrap support for Q5KJJ5 as seed ortholog is 100%.
Bootstrap support for F2SDK5 as seed ortholog is 100%.

Group of orthologs #2769. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 T.rubrum:98

Q5K9H2              	100.00%		F2SR82              	100.00%
Bootstrap support for Q5K9H2 as seed ortholog is 100%.
Bootstrap support for F2SR82 as seed ortholog is 100%.

Group of orthologs #2770. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 T.rubrum:98

Q5K8B9              	100.00%		F2STK0              	100.00%
Bootstrap support for Q5K8B9 as seed ortholog is 100%.
Bootstrap support for F2STK0 as seed ortholog is 100%.

Group of orthologs #2771. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 T.rubrum:98

Q5KLG3              	100.00%		F2SH11              	100.00%
Bootstrap support for Q5KLG3 as seed ortholog is 100%.
Bootstrap support for F2SH11 as seed ortholog is 100%.

Group of orthologs #2772. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 T.rubrum:43

Q5KP28              	100.00%		F2SG38              	100.00%
Bootstrap support for Q5KP28 as seed ortholog is 100%.
Bootstrap support for F2SG38 as seed ortholog is 98%.

Group of orthologs #2773. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 T.rubrum:98

Q5KLJ9              	100.00%		F2SPD1              	100.00%
Bootstrap support for Q5KLJ9 as seed ortholog is 100%.
Bootstrap support for F2SPD1 as seed ortholog is 100%.

Group of orthologs #2774. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:27 T.rubrum:98

Q5KE82              	100.00%		F2SYN6              	100.00%
Bootstrap support for Q5KE82 as seed ortholog is 79%.
Bootstrap support for F2SYN6 as seed ortholog is 100%.

Group of orthologs #2775. Best score 98 bits
Score difference with first non-orthologous sequence - C.neoformans:98 T.rubrum:98

Q5KHC1              	100.00%		F2T0U1              	100.00%
Bootstrap support for Q5KHC1 as seed ortholog is 100%.
Bootstrap support for F2T0U1 as seed ortholog is 100%.

Group of orthologs #2776. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 T.rubrum:97

Q5KG49              	100.00%		F2T0J7              	100.00%
Q5KG50              	37.69%		F2SUQ9              	19.77%
Bootstrap support for Q5KG49 as seed ortholog is 100%.
Bootstrap support for F2T0J7 as seed ortholog is 100%.

Group of orthologs #2777. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 T.rubrum:97

P0CM78              	100.00%		F2SEC8              	100.00%
Bootstrap support for P0CM78 as seed ortholog is 100%.
Bootstrap support for F2SEC8 as seed ortholog is 100%.

Group of orthologs #2778. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 T.rubrum:97

Q5KCL9              	100.00%		F2SEV1              	100.00%
Bootstrap support for Q5KCL9 as seed ortholog is 100%.
Bootstrap support for F2SEV1 as seed ortholog is 100%.

Group of orthologs #2779. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 T.rubrum:97

Q5KI13              	100.00%		F2SI65              	100.00%
Bootstrap support for Q5KI13 as seed ortholog is 100%.
Bootstrap support for F2SI65 as seed ortholog is 100%.

Group of orthologs #2780. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 T.rubrum:97

Q5KJH2              	100.00%		F2SHM1              	100.00%
Bootstrap support for Q5KJH2 as seed ortholog is 100%.
Bootstrap support for F2SHM1 as seed ortholog is 100%.

Group of orthologs #2781. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 T.rubrum:97

Q5KH70              	100.00%		F2SMM7              	100.00%
Bootstrap support for Q5KH70 as seed ortholog is 100%.
Bootstrap support for F2SMM7 as seed ortholog is 100%.

Group of orthologs #2782. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 T.rubrum:97

Q5KBR2              	100.00%		F2SU64              	100.00%
Bootstrap support for Q5KBR2 as seed ortholog is 100%.
Bootstrap support for F2SU64 as seed ortholog is 100%.

Group of orthologs #2783. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 T.rubrum:97

Q5K7T5              	100.00%		F2SY36              	100.00%
Bootstrap support for Q5K7T5 as seed ortholog is 100%.
Bootstrap support for F2SY36 as seed ortholog is 100%.

Group of orthologs #2784. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 T.rubrum:97

Q5KJK7              	100.00%		F2SQ72              	100.00%
Bootstrap support for Q5KJK7 as seed ortholog is 100%.
Bootstrap support for F2SQ72 as seed ortholog is 100%.

Group of orthologs #2785. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 T.rubrum:97

Q5KDU9              	100.00%		F2SX79              	100.00%
Bootstrap support for Q5KDU9 as seed ortholog is 100%.
Bootstrap support for F2SX79 as seed ortholog is 100%.

Group of orthologs #2786. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 T.rubrum:97

Q5KMD8              	100.00%		F2SV96              	100.00%
Bootstrap support for Q5KMD8 as seed ortholog is 100%.
Bootstrap support for F2SV96 as seed ortholog is 100%.

Group of orthologs #2787. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 T.rubrum:97

Q5KL37              	100.00%		F2SYR1              	100.00%
Bootstrap support for Q5KL37 as seed ortholog is 100%.
Bootstrap support for F2SYR1 as seed ortholog is 100%.

Group of orthologs #2788. Best score 97 bits
Score difference with first non-orthologous sequence - C.neoformans:97 T.rubrum:97

Q5KPZ6              	100.00%		F2SXB4              	100.00%
Bootstrap support for Q5KPZ6 as seed ortholog is 100%.
Bootstrap support for F2SXB4 as seed ortholog is 100%.

Group of orthologs #2789. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubrum:96

Q5K7L8              	100.00%		F2SJ30              	100.00%
Bootstrap support for Q5K7L8 as seed ortholog is 100%.
Bootstrap support for F2SJ30 as seed ortholog is 100%.

Group of orthologs #2790. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubrum:44

Q5K8F3              	100.00%		F2SKA6              	100.00%
Bootstrap support for Q5K8F3 as seed ortholog is 100%.
Bootstrap support for F2SKA6 as seed ortholog is 80%.

Group of orthologs #2791. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubrum:96

Q5KBZ8              	100.00%		F2SL19              	100.00%
Bootstrap support for Q5KBZ8 as seed ortholog is 100%.
Bootstrap support for F2SL19 as seed ortholog is 100%.

Group of orthologs #2792. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubrum:96

Q5KJ18              	100.00%		F2SFS7              	100.00%
Bootstrap support for Q5KJ18 as seed ortholog is 100%.
Bootstrap support for F2SFS7 as seed ortholog is 100%.

Group of orthologs #2793. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubrum:96

Q5KJT9              	100.00%		F2SF67              	100.00%
Bootstrap support for Q5KJT9 as seed ortholog is 100%.
Bootstrap support for F2SF67 as seed ortholog is 100%.

Group of orthologs #2794. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubrum:96

Q5KPM7              	100.00%		F2SDH5              	100.00%
Bootstrap support for Q5KPM7 as seed ortholog is 100%.
Bootstrap support for F2SDH5 as seed ortholog is 100%.

Group of orthologs #2795. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubrum:96

Q5KAY1              	100.00%		F2SSW7              	100.00%
Bootstrap support for Q5KAY1 as seed ortholog is 100%.
Bootstrap support for F2SSW7 as seed ortholog is 100%.

Group of orthologs #2796. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubrum:96

P0CM86              	100.00%		F2SXQ7              	100.00%
Bootstrap support for P0CM86 as seed ortholog is 100%.
Bootstrap support for F2SXQ7 as seed ortholog is 100%.

Group of orthologs #2797. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubrum:96

Q5KMB4              	100.00%		F2SHS7              	100.00%
Bootstrap support for Q5KMB4 as seed ortholog is 100%.
Bootstrap support for F2SHS7 as seed ortholog is 100%.

Group of orthologs #2798. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubrum:96

Q5K8D9              	100.00%		F2SX59              	100.00%
Bootstrap support for Q5K8D9 as seed ortholog is 100%.
Bootstrap support for F2SX59 as seed ortholog is 100%.

Group of orthologs #2799. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubrum:96

Q5KNI2              	100.00%		F2SIL4              	100.00%
Bootstrap support for Q5KNI2 as seed ortholog is 100%.
Bootstrap support for F2SIL4 as seed ortholog is 100%.

Group of orthologs #2800. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubrum:96

Q5KI24              	100.00%		F2SPB4              	100.00%
Bootstrap support for Q5KI24 as seed ortholog is 100%.
Bootstrap support for F2SPB4 as seed ortholog is 100%.

Group of orthologs #2801. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:40 T.rubrum:96

Q5KIS4              	100.00%		F2SQ63              	100.00%
Bootstrap support for Q5KIS4 as seed ortholog is 53%.
Alternative seed ortholog is Q5KE10 (40 bits away from this cluster)
Bootstrap support for F2SQ63 as seed ortholog is 100%.

Group of orthologs #2802. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubrum:96

Q5KKG7              	100.00%		F2SNQ5              	100.00%
Bootstrap support for Q5KKG7 as seed ortholog is 100%.
Bootstrap support for F2SNQ5 as seed ortholog is 100%.

Group of orthologs #2803. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubrum:96

Q5KNV5              	100.00%		F2SL25              	100.00%
Bootstrap support for Q5KNV5 as seed ortholog is 100%.
Bootstrap support for F2SL25 as seed ortholog is 100%.

Group of orthologs #2804. Best score 96 bits
Score difference with first non-orthologous sequence - C.neoformans:96 T.rubrum:96

Q5KEW9              	100.00%		F2SYS6              	100.00%
Bootstrap support for Q5KEW9 as seed ortholog is 100%.
Bootstrap support for F2SYS6 as seed ortholog is 100%.

Group of orthologs #2805. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubrum:95

P0CP24              	100.00%		F2SC96              	100.00%
Bootstrap support for P0CP24 as seed ortholog is 100%.
Bootstrap support for F2SC96 as seed ortholog is 100%.

Group of orthologs #2806. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubrum:95

Q5K8H0              	100.00%		F2SEG5              	100.00%
Bootstrap support for Q5K8H0 as seed ortholog is 100%.
Bootstrap support for F2SEG5 as seed ortholog is 100%.

Group of orthologs #2807. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubrum:95

Q5KAQ5              	100.00%		F2SE19              	100.00%
Bootstrap support for Q5KAQ5 as seed ortholog is 100%.
Bootstrap support for F2SE19 as seed ortholog is 100%.

Group of orthologs #2808. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubrum:95

Q5KKY4              	100.00%		F2SHE8              	100.00%
Bootstrap support for Q5KKY4 as seed ortholog is 100%.
Bootstrap support for F2SHE8 as seed ortholog is 100%.

Group of orthologs #2809. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubrum:95

Q5KGS8              	100.00%		F2SMU1              	100.00%
Bootstrap support for Q5KGS8 as seed ortholog is 100%.
Bootstrap support for F2SMU1 as seed ortholog is 100%.

Group of orthologs #2810. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubrum:95

Q5KBA4              	100.00%		F2SSV4              	100.00%
Bootstrap support for Q5KBA4 as seed ortholog is 100%.
Bootstrap support for F2SSV4 as seed ortholog is 100%.

Group of orthologs #2811. Best score 95 bits
Score difference with first non-orthologous sequence - C.neoformans:95 T.rubrum:95

Q5KQ23              	100.00%		F2SNN6              	100.00%
Bootstrap support for Q5KQ23 as seed ortholog is 100%.
Bootstrap support for F2SNN6 as seed ortholog is 100%.

Group of orthologs #2812. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubrum:94

Q5KFM1              	100.00%		F2SC49              	100.00%
Bootstrap support for Q5KFM1 as seed ortholog is 100%.
Bootstrap support for F2SC49 as seed ortholog is 100%.

Group of orthologs #2813. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubrum:94

Q5KEV9              	100.00%		F2SFC6              	100.00%
Bootstrap support for Q5KEV9 as seed ortholog is 100%.
Bootstrap support for F2SFC6 as seed ortholog is 100%.

Group of orthologs #2814. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubrum:94

Q5K7S8              	100.00%		F2SN78              	100.00%
Bootstrap support for Q5K7S8 as seed ortholog is 100%.
Bootstrap support for F2SN78 as seed ortholog is 100%.

Group of orthologs #2815. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubrum:94

Q5KC62              	100.00%		F2SLG6              	100.00%
Bootstrap support for Q5KC62 as seed ortholog is 100%.
Bootstrap support for F2SLG6 as seed ortholog is 100%.

Group of orthologs #2816. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubrum:94

Q5K8M0              	100.00%		F2SSY7              	100.00%
Bootstrap support for Q5K8M0 as seed ortholog is 100%.
Bootstrap support for F2SSY7 as seed ortholog is 100%.

Group of orthologs #2817. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubrum:94

Q5KEC6              	100.00%		F2SPL4              	100.00%
Bootstrap support for Q5KEC6 as seed ortholog is 100%.
Bootstrap support for F2SPL4 as seed ortholog is 100%.

Group of orthologs #2818. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubrum:94

P0CR90              	100.00%		F2SXL0              	100.00%
Bootstrap support for P0CR90 as seed ortholog is 100%.
Bootstrap support for F2SXL0 as seed ortholog is 100%.

Group of orthologs #2819. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubrum:8

Q5KLI5              	100.00%		F2SNZ3              	100.00%
Bootstrap support for Q5KLI5 as seed ortholog is 100%.
Bootstrap support for F2SNZ3 as seed ortholog is 59%.
Alternative seed ortholog is F2SLU3 (8 bits away from this cluster)

Group of orthologs #2820. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubrum:94

Q5KGQ6              	100.00%		F2SUQ1              	100.00%
Bootstrap support for Q5KGQ6 as seed ortholog is 100%.
Bootstrap support for F2SUQ1 as seed ortholog is 100%.

Group of orthologs #2821. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubrum:94

Q5KMW4              	100.00%		F2SQ90              	100.00%
Bootstrap support for Q5KMW4 as seed ortholog is 100%.
Bootstrap support for F2SQ90 as seed ortholog is 100%.

Group of orthologs #2822. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubrum:94

Q5KLA8              	100.00%		F2SRW4              	100.00%
Bootstrap support for Q5KLA8 as seed ortholog is 100%.
Bootstrap support for F2SRW4 as seed ortholog is 100%.

Group of orthologs #2823. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:19 T.rubrum:94

Q5KMD6              	100.00%		F2SSK1              	100.00%
Bootstrap support for Q5KMD6 as seed ortholog is 63%.
Alternative seed ortholog is Q5KA49 (19 bits away from this cluster)
Bootstrap support for F2SSK1 as seed ortholog is 100%.

Group of orthologs #2824. Best score 94 bits
Score difference with first non-orthologous sequence - C.neoformans:94 T.rubrum:94

Q5KFB3              	100.00%		F2SZW5              	100.00%
Bootstrap support for Q5KFB3 as seed ortholog is 100%.
Bootstrap support for F2SZW5 as seed ortholog is 100%.

Group of orthologs #2825. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 T.rubrum:93

Q5KCL2              	100.00%		F2SEC3              	100.00%
Bootstrap support for Q5KCL2 as seed ortholog is 100%.
Bootstrap support for F2SEC3 as seed ortholog is 100%.

Group of orthologs #2826. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 T.rubrum:93

Q5KIE8              	100.00%		F2SHZ7              	100.00%
Bootstrap support for Q5KIE8 as seed ortholog is 100%.
Bootstrap support for F2SHZ7 as seed ortholog is 100%.

Group of orthologs #2827. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 T.rubrum:93

Q5KAA3              	100.00%		F2STR4              	100.00%
Bootstrap support for Q5KAA3 as seed ortholog is 100%.
Bootstrap support for F2STR4 as seed ortholog is 100%.

Group of orthologs #2828. Best score 93 bits
Score difference with first non-orthologous sequence - C.neoformans:93 T.rubrum:93

Q5KET9              	100.00%		F2SQH8              	100.00%
Bootstrap support for Q5KET9 as seed ortholog is 100%.
Bootstrap support for F2SQH8 as seed ortholog is 100%.

Group of orthologs #2829. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 T.rubrum:92

Q5KA18              	100.00%		F2SL71              	100.00%
                    	       		F2SWE5              	15.01%
                    	       		F2SVM6              	13.94%
Bootstrap support for Q5KA18 as seed ortholog is 100%.
Bootstrap support for F2SL71 as seed ortholog is 100%.

Group of orthologs #2830. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:29 T.rubrum:38

Q5KB78              	100.00%		F2SPA5              	100.00%
Q5K978              	8.33%		
Bootstrap support for Q5KB78 as seed ortholog is 76%.
Bootstrap support for F2SPA5 as seed ortholog is 82%.

Group of orthologs #2831. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 T.rubrum:92

Q5K9E5              	100.00%		F2SKH9              	100.00%
Bootstrap support for Q5K9E5 as seed ortholog is 100%.
Bootstrap support for F2SKH9 as seed ortholog is 100%.

Group of orthologs #2832. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 T.rubrum:92

Q5KK06              	100.00%		F2SCS9              	100.00%
Bootstrap support for Q5KK06 as seed ortholog is 100%.
Bootstrap support for F2SCS9 as seed ortholog is 100%.

Group of orthologs #2833. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 T.rubrum:92

Q5KIZ2              	100.00%		F2SF57              	100.00%
Bootstrap support for Q5KIZ2 as seed ortholog is 100%.
Bootstrap support for F2SF57 as seed ortholog is 100%.

Group of orthologs #2834. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 T.rubrum:92

P0CO24              	100.00%		F2SW04              	100.00%
Bootstrap support for P0CO24 as seed ortholog is 100%.
Bootstrap support for F2SW04 as seed ortholog is 100%.

Group of orthologs #2835. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 T.rubrum:92

Q5KPM0              	100.00%		F2SE91              	100.00%
Bootstrap support for Q5KPM0 as seed ortholog is 100%.
Bootstrap support for F2SE91 as seed ortholog is 100%.

Group of orthologs #2836. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 T.rubrum:92

Q5KLF3              	100.00%		F2SH76              	100.00%
Bootstrap support for Q5KLF3 as seed ortholog is 100%.
Bootstrap support for F2SH76 as seed ortholog is 100%.

Group of orthologs #2837. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 T.rubrum:92

P0CM10              	100.00%		F2SYA3              	100.00%
Bootstrap support for P0CM10 as seed ortholog is 100%.
Bootstrap support for F2SYA3 as seed ortholog is 100%.

Group of orthologs #2838. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 T.rubrum:92

Q5KMJ7              	100.00%		F2SI71              	100.00%
Bootstrap support for Q5KMJ7 as seed ortholog is 100%.
Bootstrap support for F2SI71 as seed ortholog is 100%.

Group of orthologs #2839. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 T.rubrum:92

Q5K7R2              	100.00%		F2SWU7              	100.00%
Bootstrap support for Q5K7R2 as seed ortholog is 100%.
Bootstrap support for F2SWU7 as seed ortholog is 100%.

Group of orthologs #2840. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 T.rubrum:92

Q5KBB3              	100.00%		F2SY87              	100.00%
Bootstrap support for Q5KBB3 as seed ortholog is 100%.
Bootstrap support for F2SY87 as seed ortholog is 100%.

Group of orthologs #2841. Best score 92 bits
Score difference with first non-orthologous sequence - C.neoformans:92 T.rubrum:92

Q5KPZ3              	100.00%		F2SZL3              	100.00%
Bootstrap support for Q5KPZ3 as seed ortholog is 100%.
Bootstrap support for F2SZL3 as seed ortholog is 100%.

Group of orthologs #2842. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubrum:91

Q5K9T9              	100.00%		F2SRB2              	100.00%
                    	       		F2SRB4              	22.26%
Bootstrap support for Q5K9T9 as seed ortholog is 100%.
Bootstrap support for F2SRB2 as seed ortholog is 100%.

Group of orthologs #2843. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubrum:21

Q5KC84              	100.00%		F2SF25              	100.00%
Bootstrap support for Q5KC84 as seed ortholog is 100%.
Bootstrap support for F2SF25 as seed ortholog is 77%.

Group of orthologs #2844. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubrum:91

Q5KHB1              	100.00%		F2SC41              	100.00%
Bootstrap support for Q5KHB1 as seed ortholog is 100%.
Bootstrap support for F2SC41 as seed ortholog is 100%.

Group of orthologs #2845. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubrum:91

Q5KK46              	100.00%		F2SHR9              	100.00%
Bootstrap support for Q5KK46 as seed ortholog is 100%.
Bootstrap support for F2SHR9 as seed ortholog is 100%.

Group of orthologs #2846. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubrum:91

Q5KBG4              	100.00%		F2SR41              	100.00%
Bootstrap support for Q5KBG4 as seed ortholog is 100%.
Bootstrap support for F2SR41 as seed ortholog is 100%.

Group of orthologs #2847. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubrum:91

P0CQ32              	100.00%		F2SXG4              	100.00%
Bootstrap support for P0CQ32 as seed ortholog is 100%.
Bootstrap support for F2SXG4 as seed ortholog is 100%.

Group of orthologs #2848. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubrum:91

Q5KFF8              	100.00%		F2SUQ0              	100.00%
Bootstrap support for Q5KFF8 as seed ortholog is 100%.
Bootstrap support for F2SUQ0 as seed ortholog is 100%.

Group of orthologs #2849. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubrum:91

Q5KJV2              	100.00%		F2SQX0              	100.00%
Bootstrap support for Q5KJV2 as seed ortholog is 100%.
Bootstrap support for F2SQX0 as seed ortholog is 100%.

Group of orthologs #2850. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubrum:91

Q5KFZ6              	100.00%		F2SVI6              	100.00%
Bootstrap support for Q5KFZ6 as seed ortholog is 100%.
Bootstrap support for F2SVI6 as seed ortholog is 100%.

Group of orthologs #2851. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubrum:91

Q5KG58              	100.00%		F2SVL9              	100.00%
Bootstrap support for Q5KG58 as seed ortholog is 100%.
Bootstrap support for F2SVL9 as seed ortholog is 100%.

Group of orthologs #2852. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubrum:91

Q5KBU2              	100.00%		F2SZK3              	100.00%
Bootstrap support for Q5KBU2 as seed ortholog is 100%.
Bootstrap support for F2SZK3 as seed ortholog is 100%.

Group of orthologs #2853. Best score 91 bits
Score difference with first non-orthologous sequence - C.neoformans:91 T.rubrum:91

Q5KPF6              	100.00%		F2STS2              	100.00%
Bootstrap support for Q5KPF6 as seed ortholog is 100%.
Bootstrap support for F2STS2 as seed ortholog is 100%.

Group of orthologs #2854. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 T.rubrum:90

Q5KIQ8              	100.00%		F2SFS9              	100.00%
Bootstrap support for Q5KIQ8 as seed ortholog is 100%.
Bootstrap support for F2SFS9 as seed ortholog is 100%.

Group of orthologs #2855. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 T.rubrum:90

Q5K8Z4              	100.00%		F2SPN9              	100.00%
Bootstrap support for Q5K8Z4 as seed ortholog is 100%.
Bootstrap support for F2SPN9 as seed ortholog is 100%.

Group of orthologs #2856. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 T.rubrum:90

Q5KM19              	100.00%		F2SDF5              	100.00%
Bootstrap support for Q5KM19 as seed ortholog is 100%.
Bootstrap support for F2SDF5 as seed ortholog is 100%.

Group of orthologs #2857. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 T.rubrum:90

Q5K734              	100.00%		F2SST2              	100.00%
Bootstrap support for Q5K734 as seed ortholog is 100%.
Bootstrap support for F2SST2 as seed ortholog is 100%.

Group of orthologs #2858. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 T.rubrum:90

Q5KC20              	100.00%		F2SVA3              	100.00%
Bootstrap support for Q5KC20 as seed ortholog is 100%.
Bootstrap support for F2SVA3 as seed ortholog is 100%.

Group of orthologs #2859. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 T.rubrum:90

Q5KJZ8              	100.00%		F2SRS5              	100.00%
Bootstrap support for Q5KJZ8 as seed ortholog is 100%.
Bootstrap support for F2SRS5 as seed ortholog is 100%.

Group of orthologs #2860. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 T.rubrum:90

Q5KE91              	100.00%		F2SXN6              	100.00%
Bootstrap support for Q5KE91 as seed ortholog is 100%.
Bootstrap support for F2SXN6 as seed ortholog is 100%.

Group of orthologs #2861. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 T.rubrum:90

Q5KCU7              	100.00%		F2T080              	100.00%
Bootstrap support for Q5KCU7 as seed ortholog is 100%.
Bootstrap support for F2T080 as seed ortholog is 100%.

Group of orthologs #2862. Best score 90 bits
Score difference with first non-orthologous sequence - C.neoformans:90 T.rubrum:90

Q5KH20              	100.00%		F2SZH1              	100.00%
Bootstrap support for Q5KH20 as seed ortholog is 100%.
Bootstrap support for F2SZH1 as seed ortholog is 100%.

Group of orthologs #2863. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubrum:89

Q5KP34              	100.00%		F2SRJ0              	100.00%
Q5KF09              	41.22%		
Bootstrap support for Q5KP34 as seed ortholog is 100%.
Bootstrap support for F2SRJ0 as seed ortholog is 100%.

Group of orthologs #2864. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubrum:89

Q5K8L5              	100.00%		F2SEA7              	100.00%
Bootstrap support for Q5K8L5 as seed ortholog is 100%.
Bootstrap support for F2SEA7 as seed ortholog is 100%.

Group of orthologs #2865. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubrum:89

Q5KKD6              	100.00%		F2SBL2              	100.00%
Bootstrap support for Q5KKD6 as seed ortholog is 100%.
Bootstrap support for F2SBL2 as seed ortholog is 100%.

Group of orthologs #2866. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubrum:89

Q5KGC7              	100.00%		F2SH29              	100.00%
Bootstrap support for Q5KGC7 as seed ortholog is 100%.
Bootstrap support for F2SH29 as seed ortholog is 100%.

Group of orthologs #2867. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubrum:89

Q5KG27              	100.00%		F2SPX1              	100.00%
Bootstrap support for Q5KG27 as seed ortholog is 100%.
Bootstrap support for F2SPX1 as seed ortholog is 100%.

Group of orthologs #2868. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubrum:89

Q5KIT8              	100.00%		F2SMR3              	100.00%
Bootstrap support for Q5KIT8 as seed ortholog is 100%.
Bootstrap support for F2SMR3 as seed ortholog is 100%.

Group of orthologs #2869. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubrum:47

Q5KKG3              	100.00%		F2SLD4              	100.00%
Bootstrap support for Q5KKG3 as seed ortholog is 100%.
Bootstrap support for F2SLD4 as seed ortholog is 97%.

Group of orthologs #2870. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubrum:89

Q5KKI4              	100.00%		F2SNV7              	100.00%
Bootstrap support for Q5KKI4 as seed ortholog is 100%.
Bootstrap support for F2SNV7 as seed ortholog is 100%.

Group of orthologs #2871. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubrum:89

Q5K9F5              	100.00%		F2T0P1              	100.00%
Bootstrap support for Q5K9F5 as seed ortholog is 100%.
Bootstrap support for F2T0P1 as seed ortholog is 100%.

Group of orthologs #2872. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubrum:89

Q5KLQ9              	100.00%		F2SR59              	100.00%
Bootstrap support for Q5KLQ9 as seed ortholog is 100%.
Bootstrap support for F2SR59 as seed ortholog is 100%.

Group of orthologs #2873. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubrum:89

Q5KN63              	100.00%		F2SSD7              	100.00%
Bootstrap support for Q5KN63 as seed ortholog is 100%.
Bootstrap support for F2SSD7 as seed ortholog is 100%.

Group of orthologs #2874. Best score 89 bits
Score difference with first non-orthologous sequence - C.neoformans:89 T.rubrum:89

Q5KNQ6              	100.00%		F2SSM0              	100.00%
Bootstrap support for Q5KNQ6 as seed ortholog is 100%.
Bootstrap support for F2SSM0 as seed ortholog is 100%.

Group of orthologs #2875. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 T.rubrum:88

Q5KEB2              	100.00%		F2SIB0              	100.00%
                    	       		F2SPK1              	25.00%
Bootstrap support for Q5KEB2 as seed ortholog is 100%.
Bootstrap support for F2SIB0 as seed ortholog is 100%.

Group of orthologs #2876. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:23 T.rubrum:88

Q5KM01              	100.00%		F2SKZ4              	100.00%
Q5KGK0              	5.35%		
Bootstrap support for Q5KM01 as seed ortholog is 71%.
Alternative seed ortholog is Q5K893 (23 bits away from this cluster)
Bootstrap support for F2SKZ4 as seed ortholog is 100%.

Group of orthologs #2877. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 T.rubrum:88

Q5K8P8              	100.00%		F2SCR2              	100.00%
Bootstrap support for Q5K8P8 as seed ortholog is 100%.
Bootstrap support for F2SCR2 as seed ortholog is 100%.

Group of orthologs #2878. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 T.rubrum:88

Q5KB39              	100.00%		F2SHB6              	100.00%
Bootstrap support for Q5KB39 as seed ortholog is 100%.
Bootstrap support for F2SHB6 as seed ortholog is 100%.

Group of orthologs #2879. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 T.rubrum:88

P0CM06              	100.00%		F2SPZ4              	100.00%
Bootstrap support for P0CM06 as seed ortholog is 100%.
Bootstrap support for F2SPZ4 as seed ortholog is 100%.

Group of orthologs #2880. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 T.rubrum:88

Q5KDT6              	100.00%		F2SLT3              	100.00%
Bootstrap support for Q5KDT6 as seed ortholog is 100%.
Bootstrap support for F2SLT3 as seed ortholog is 100%.

Group of orthologs #2881. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 T.rubrum:88

Q5KFN8              	100.00%		F2SNE0              	100.00%
Bootstrap support for Q5KFN8 as seed ortholog is 100%.
Bootstrap support for F2SNE0 as seed ortholog is 100%.

Group of orthologs #2882. Best score 88 bits
Score difference with first non-orthologous sequence - C.neoformans:88 T.rubrum:88

Q5KLF0              	100.00%		F2STW7              	100.00%
Bootstrap support for Q5KLF0 as seed ortholog is 100%.
Bootstrap support for F2STW7 as seed ortholog is 100%.

Group of orthologs #2883. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 T.rubrum:87

Q5KBL1              	100.00%		F2SLD9              	100.00%
Bootstrap support for Q5KBL1 as seed ortholog is 100%.
Bootstrap support for F2SLD9 as seed ortholog is 100%.

Group of orthologs #2884. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 T.rubrum:87

Q5KPB9              	100.00%		F2SJU1              	100.00%
Bootstrap support for Q5KPB9 as seed ortholog is 100%.
Bootstrap support for F2SJU1 as seed ortholog is 100%.

Group of orthologs #2885. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 T.rubrum:87

Q5KPQ1              	100.00%		F2SLJ7              	100.00%
Bootstrap support for Q5KPQ1 as seed ortholog is 100%.
Bootstrap support for F2SLJ7 as seed ortholog is 100%.

Group of orthologs #2886. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 T.rubrum:87

Q5KDX1              	100.00%		F2SXI4              	100.00%
Bootstrap support for Q5KDX1 as seed ortholog is 100%.
Bootstrap support for F2SXI4 as seed ortholog is 100%.

Group of orthologs #2887. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 T.rubrum:87

Q5KI28              	100.00%		F2SYI9              	100.00%
Bootstrap support for Q5KI28 as seed ortholog is 100%.
Bootstrap support for F2SYI9 as seed ortholog is 100%.

Group of orthologs #2888. Best score 87 bits
Score difference with first non-orthologous sequence - C.neoformans:87 T.rubrum:87

Q5KJX5              	100.00%		F2SZ36              	100.00%
Bootstrap support for Q5KJX5 as seed ortholog is 100%.
Bootstrap support for F2SZ36 as seed ortholog is 100%.

Group of orthologs #2889. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubrum:41

Q5KPW8              	100.00%		F2SHU7              	100.00%
                    	       		F2SBQ2              	10.14%
Bootstrap support for Q5KPW8 as seed ortholog is 100%.
Bootstrap support for F2SHU7 as seed ortholog is 82%.

Group of orthologs #2890. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubrum:86

Q5KE18              	100.00%		F2SFI4              	100.00%
Bootstrap support for Q5KE18 as seed ortholog is 100%.
Bootstrap support for F2SFI4 as seed ortholog is 100%.

Group of orthologs #2891. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubrum:86

Q5KGW1              	100.00%		F2SEW6              	100.00%
Bootstrap support for Q5KGW1 as seed ortholog is 100%.
Bootstrap support for F2SEW6 as seed ortholog is 100%.

Group of orthologs #2892. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubrum:86

Q5KK31              	100.00%		F2SD39              	100.00%
Bootstrap support for Q5KK31 as seed ortholog is 100%.
Bootstrap support for F2SD39 as seed ortholog is 100%.

Group of orthologs #2893. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubrum:86

Q5KPF0              	100.00%		F2SBX5              	100.00%
Bootstrap support for Q5KPF0 as seed ortholog is 100%.
Bootstrap support for F2SBX5 as seed ortholog is 100%.

Group of orthologs #2894. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubrum:86

Q5KPL9              	100.00%		F2SD98              	100.00%
Bootstrap support for Q5KPL9 as seed ortholog is 100%.
Bootstrap support for F2SD98 as seed ortholog is 100%.

Group of orthologs #2895. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubrum:86

Q5KFI5              	100.00%		F2SX27              	100.00%
Bootstrap support for Q5KFI5 as seed ortholog is 100%.
Bootstrap support for F2SX27 as seed ortholog is 100%.

Group of orthologs #2896. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubrum:86

Q5KPI7              	100.00%		F2SRQ0              	100.00%
Bootstrap support for Q5KPI7 as seed ortholog is 100%.
Bootstrap support for F2SRQ0 as seed ortholog is 100%.

Group of orthologs #2897. Best score 86 bits
Score difference with first non-orthologous sequence - C.neoformans:86 T.rubrum:86

Q5KL76              	100.00%		F2SZZ3              	100.00%
Bootstrap support for Q5KL76 as seed ortholog is 100%.
Bootstrap support for F2SZZ3 as seed ortholog is 100%.

Group of orthologs #2898. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 T.rubrum:85

Q5KA72              	100.00%		F2SMV5              	100.00%
Bootstrap support for Q5KA72 as seed ortholog is 100%.
Bootstrap support for F2SMV5 as seed ortholog is 100%.

Group of orthologs #2899. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 T.rubrum:85

Q5KJT0              	100.00%		F2SH02              	100.00%
Bootstrap support for Q5KJT0 as seed ortholog is 100%.
Bootstrap support for F2SH02 as seed ortholog is 100%.

Group of orthologs #2900. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 T.rubrum:85

Q5K8M3              	100.00%		F2SWV6              	100.00%
Bootstrap support for Q5K8M3 as seed ortholog is 100%.
Bootstrap support for F2SWV6 as seed ortholog is 100%.

Group of orthologs #2901. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 T.rubrum:85

Q5KCX3              	100.00%		F2SXW6              	100.00%
Bootstrap support for Q5KCX3 as seed ortholog is 100%.
Bootstrap support for F2SXW6 as seed ortholog is 100%.

Group of orthologs #2902. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 T.rubrum:85

Q5KLX8              	100.00%		F2SV76              	100.00%
Bootstrap support for Q5KLX8 as seed ortholog is 100%.
Bootstrap support for F2SV76 as seed ortholog is 100%.

Group of orthologs #2903. Best score 85 bits
Score difference with first non-orthologous sequence - C.neoformans:85 T.rubrum:85

Q5KL85              	100.00%		F2SZE2              	100.00%
Bootstrap support for Q5KL85 as seed ortholog is 100%.
Bootstrap support for F2SZE2 as seed ortholog is 100%.

Group of orthologs #2904. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:22 T.rubrum:17

Q5KML8              	100.00%		F2SKY6              	100.00%
Q5KJT3              	31.05%		F2T1A5              	33.82%
Bootstrap support for Q5KML8 as seed ortholog is 78%.
Bootstrap support for F2SKY6 as seed ortholog is 73%.
Alternative seed ortholog is F2SYC8 (17 bits away from this cluster)

Group of orthologs #2905. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 T.rubrum:84

Q5KFR6              	100.00%		F2SFK6              	100.00%
Bootstrap support for Q5KFR6 as seed ortholog is 100%.
Bootstrap support for F2SFK6 as seed ortholog is 100%.

Group of orthologs #2906. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 T.rubrum:84

Q5KBD5              	100.00%		F2SS82              	100.00%
Bootstrap support for Q5KBD5 as seed ortholog is 100%.
Bootstrap support for F2SS82 as seed ortholog is 100%.

Group of orthologs #2907. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 T.rubrum:84

Q5KF06              	100.00%		F2SQN9              	100.00%
Bootstrap support for Q5KF06 as seed ortholog is 100%.
Bootstrap support for F2SQN9 as seed ortholog is 100%.

Group of orthologs #2908. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 T.rubrum:84

Q5K964              	100.00%		F2SY41              	100.00%
Bootstrap support for Q5K964 as seed ortholog is 100%.
Bootstrap support for F2SY41 as seed ortholog is 100%.

Group of orthologs #2909. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 T.rubrum:84

Q5KB51              	100.00%		F2T106              	100.00%
Bootstrap support for Q5KB51 as seed ortholog is 100%.
Bootstrap support for F2T106 as seed ortholog is 100%.

Group of orthologs #2910. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 T.rubrum:84

Q5KIF7              	100.00%		F2SW11              	100.00%
Bootstrap support for Q5KIF7 as seed ortholog is 100%.
Bootstrap support for F2SW11 as seed ortholog is 100%.

Group of orthologs #2911. Best score 84 bits
Score difference with first non-orthologous sequence - C.neoformans:84 T.rubrum:84

Q5KNV4              	100.00%		F2SXC1              	100.00%
Bootstrap support for Q5KNV4 as seed ortholog is 100%.
Bootstrap support for F2SXC1 as seed ortholog is 100%.

Group of orthologs #2912. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 T.rubrum:83

Q5K817              	100.00%		F2SZ38              	100.00%
Q5KII5              	100.00%		
Bootstrap support for Q5K817 as seed ortholog is 100%.
Bootstrap support for Q5KII5 as seed ortholog is 100%.
Bootstrap support for F2SZ38 as seed ortholog is 100%.

Group of orthologs #2913. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 T.rubrum:83

P0CM94              	100.00%		F2SFM0              	100.00%
Bootstrap support for P0CM94 as seed ortholog is 100%.
Bootstrap support for F2SFM0 as seed ortholog is 100%.

Group of orthologs #2914. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 T.rubrum:83

Q5KL03              	100.00%		F2SBR7              	100.00%
Bootstrap support for Q5KL03 as seed ortholog is 100%.
Bootstrap support for F2SBR7 as seed ortholog is 100%.

Group of orthologs #2915. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 T.rubrum:83

Q5KJM3              	100.00%		F2SDV3              	100.00%
Bootstrap support for Q5KJM3 as seed ortholog is 100%.
Bootstrap support for F2SDV3 as seed ortholog is 100%.

Group of orthologs #2916. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 T.rubrum:83

P0CN06              	100.00%		F2SS07              	100.00%
Bootstrap support for P0CN06 as seed ortholog is 100%.
Bootstrap support for F2SS07 as seed ortholog is 100%.

Group of orthologs #2917. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 T.rubrum:83

Q5KGL2              	100.00%		F2SKT8              	100.00%
Bootstrap support for Q5KGL2 as seed ortholog is 100%.
Bootstrap support for F2SKT8 as seed ortholog is 100%.

Group of orthologs #2918. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 T.rubrum:83

Q5KJI3              	100.00%		F2SIX6              	100.00%
Bootstrap support for Q5KJI3 as seed ortholog is 100%.
Bootstrap support for F2SIX6 as seed ortholog is 100%.

Group of orthologs #2919. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 T.rubrum:83

Q5KA77              	100.00%		F2SV82              	100.00%
Bootstrap support for Q5KA77 as seed ortholog is 100%.
Bootstrap support for F2SV82 as seed ortholog is 100%.

Group of orthologs #2920. Best score 83 bits
Score difference with first non-orthologous sequence - C.neoformans:83 T.rubrum:83

Q5KK05              	100.00%		F2SSR1              	100.00%
Bootstrap support for Q5KK05 as seed ortholog is 100%.
Bootstrap support for F2SSR1 as seed ortholog is 100%.

Group of orthologs #2921. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 T.rubrum:82

Q5KLX4              	100.00%		F2SE10              	100.00%
Q5K9M6              	47.14%		
Q5KH93              	18.65%		
Bootstrap support for Q5KLX4 as seed ortholog is 100%.
Bootstrap support for F2SE10 as seed ortholog is 100%.

Group of orthologs #2922. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 T.rubrum:82

Q5KA20              	100.00%		F2SIV7              	100.00%
Bootstrap support for Q5KA20 as seed ortholog is 100%.
Bootstrap support for F2SIV7 as seed ortholog is 100%.

Group of orthologs #2923. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 T.rubrum:82

Q5KCE2              	100.00%		F2SH20              	100.00%
Bootstrap support for Q5KCE2 as seed ortholog is 100%.
Bootstrap support for F2SH20 as seed ortholog is 100%.

Group of orthologs #2924. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 T.rubrum:82

Q5KAI3              	100.00%		F2SIY1              	100.00%
Bootstrap support for Q5KAI3 as seed ortholog is 100%.
Bootstrap support for F2SIY1 as seed ortholog is 100%.

Group of orthologs #2925. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 T.rubrum:82

Q5KIY1              	100.00%		F2SBY7              	100.00%
Bootstrap support for Q5KIY1 as seed ortholog is 100%.
Bootstrap support for F2SBY7 as seed ortholog is 100%.

Group of orthologs #2926. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 T.rubrum:82

Q5KBN5              	100.00%		F2SNN9              	100.00%
Bootstrap support for Q5KBN5 as seed ortholog is 100%.
Bootstrap support for F2SNN9 as seed ortholog is 100%.

Group of orthologs #2927. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 T.rubrum:82

Q5K779              	100.00%		F2STG5              	100.00%
Bootstrap support for Q5K779 as seed ortholog is 100%.
Bootstrap support for F2STG5 as seed ortholog is 100%.

Group of orthologs #2928. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 T.rubrum:82

Q5KPU0              	100.00%		F2SCK3              	100.00%
Bootstrap support for Q5KPU0 as seed ortholog is 100%.
Bootstrap support for F2SCK3 as seed ortholog is 100%.

Group of orthologs #2929. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 T.rubrum:82

P0CM64              	100.00%		F2SW85              	100.00%
Bootstrap support for P0CM64 as seed ortholog is 100%.
Bootstrap support for F2SW85 as seed ortholog is 100%.

Group of orthologs #2930. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 T.rubrum:82

Q5KKH5              	100.00%		F2SQX4              	100.00%
Bootstrap support for Q5KKH5 as seed ortholog is 100%.
Bootstrap support for F2SQX4 as seed ortholog is 100%.

Group of orthologs #2931. Best score 82 bits
Score difference with first non-orthologous sequence - C.neoformans:82 T.rubrum:82

Q5KHA3              	100.00%		F2SV95              	100.00%
Bootstrap support for Q5KHA3 as seed ortholog is 100%.
Bootstrap support for F2SV95 as seed ortholog is 100%.

Group of orthologs #2932. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:24 T.rubrum:81

Q5KDZ6              	100.00%		F2SF26              	100.00%
Bootstrap support for Q5KDZ6 as seed ortholog is 94%.
Bootstrap support for F2SF26 as seed ortholog is 100%.

Group of orthologs #2933. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 T.rubrum:81

Q5KF56              	100.00%		F2SEP0              	100.00%
Bootstrap support for Q5KF56 as seed ortholog is 100%.
Bootstrap support for F2SEP0 as seed ortholog is 100%.

Group of orthologs #2934. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 T.rubrum:81

Q5K853              	100.00%		F2SNW9              	100.00%
Bootstrap support for Q5K853 as seed ortholog is 100%.
Bootstrap support for F2SNW9 as seed ortholog is 100%.

Group of orthologs #2935. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 T.rubrum:81

Q5K8Z9              	100.00%		F2SQP6              	100.00%
Bootstrap support for Q5K8Z9 as seed ortholog is 100%.
Bootstrap support for F2SQP6 as seed ortholog is 100%.

Group of orthologs #2936. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 T.rubrum:81

Q5KJL3              	100.00%		F2SNV6              	100.00%
Bootstrap support for Q5KJL3 as seed ortholog is 100%.
Bootstrap support for F2SNV6 as seed ortholog is 100%.

Group of orthologs #2937. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 T.rubrum:81

Q5KBV8              	100.00%		F2SX91              	100.00%
Bootstrap support for Q5KBV8 as seed ortholog is 100%.
Bootstrap support for F2SX91 as seed ortholog is 100%.

Group of orthologs #2938. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 T.rubrum:81

Q5KLP1              	100.00%		F2STT6              	100.00%
Bootstrap support for Q5KLP1 as seed ortholog is 100%.
Bootstrap support for F2STT6 as seed ortholog is 100%.

Group of orthologs #2939. Best score 81 bits
Score difference with first non-orthologous sequence - C.neoformans:81 T.rubrum:81

Q5KHQ2              	100.00%		F2T1C3              	100.00%
Bootstrap support for Q5KHQ2 as seed ortholog is 100%.
Bootstrap support for F2T1C3 as seed ortholog is 100%.

Group of orthologs #2940. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubrum:80

P0CR96              	100.00%		F2SID6              	100.00%
Bootstrap support for P0CR96 as seed ortholog is 100%.
Bootstrap support for F2SID6 as seed ortholog is 100%.

Group of orthologs #2941. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubrum:80

Q5KDD0              	100.00%		F2SIW1              	100.00%
Bootstrap support for Q5KDD0 as seed ortholog is 100%.
Bootstrap support for F2SIW1 as seed ortholog is 100%.

Group of orthologs #2942. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubrum:80

Q5KNP9              	100.00%		F2SBY8              	100.00%
Bootstrap support for Q5KNP9 as seed ortholog is 100%.
Bootstrap support for F2SBY8 as seed ortholog is 100%.

Group of orthologs #2943. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubrum:80

Q5KL91              	100.00%		F2SES8              	100.00%
Bootstrap support for Q5KL91 as seed ortholog is 100%.
Bootstrap support for F2SES8 as seed ortholog is 100%.

Group of orthologs #2944. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubrum:80

P0CR98              	100.00%		F2STI4              	100.00%
Bootstrap support for P0CR98 as seed ortholog is 100%.
Bootstrap support for F2STI4 as seed ortholog is 100%.

Group of orthologs #2945. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubrum:80

Q5KMD0              	100.00%		F2SGX0              	100.00%
Bootstrap support for Q5KMD0 as seed ortholog is 100%.
Bootstrap support for F2SGX0 as seed ortholog is 100%.

Group of orthologs #2946. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubrum:80

Q5KC12              	100.00%		F2STM0              	100.00%
Bootstrap support for Q5KC12 as seed ortholog is 100%.
Bootstrap support for F2STM0 as seed ortholog is 100%.

Group of orthologs #2947. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubrum:80

Q5K9V6              	100.00%		F2T0I3              	100.00%
Bootstrap support for Q5K9V6 as seed ortholog is 100%.
Bootstrap support for F2T0I3 as seed ortholog is 100%.

Group of orthologs #2948. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubrum:80

Q5KAI0              	100.00%		F2T0P5              	100.00%
Bootstrap support for Q5KAI0 as seed ortholog is 100%.
Bootstrap support for F2T0P5 as seed ortholog is 100%.

Group of orthologs #2949. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubrum:80

Q5KHK2              	100.00%		F2SV27              	100.00%
Bootstrap support for Q5KHK2 as seed ortholog is 100%.
Bootstrap support for F2SV27 as seed ortholog is 100%.

Group of orthologs #2950. Best score 80 bits
Score difference with first non-orthologous sequence - C.neoformans:80 T.rubrum:80

Q5KGY5              	100.00%		F2SZZ4              	100.00%
Bootstrap support for Q5KGY5 as seed ortholog is 100%.
Bootstrap support for F2SZZ4 as seed ortholog is 100%.

Group of orthologs #2951. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubrum:79

Q5KNC2              	100.00%		F2SN56              	100.00%
Q6U1Z4              	100.00%		F2SE71              	100.00%
Q5K836              	19.65%		F2SQT9              	30.78%
                    	       		F2SY44              	7.58%
Bootstrap support for Q5KNC2 as seed ortholog is 100%.
Bootstrap support for Q6U1Z4 as seed ortholog is 100%.
Bootstrap support for F2SN56 as seed ortholog is 100%.
Bootstrap support for F2SE71 as seed ortholog is 100%.

Group of orthologs #2952. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubrum:79

Q5K823              	100.00%		F2SE37              	100.00%
Bootstrap support for Q5K823 as seed ortholog is 100%.
Bootstrap support for F2SE37 as seed ortholog is 100%.

Group of orthologs #2953. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubrum:79

Q5K7K0              	100.00%		F2SGF8              	100.00%
Bootstrap support for Q5K7K0 as seed ortholog is 100%.
Bootstrap support for F2SGF8 as seed ortholog is 100%.

Group of orthologs #2954. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubrum:79

Q5KDI4              	100.00%		F2SFV9              	100.00%
Bootstrap support for Q5KDI4 as seed ortholog is 100%.
Bootstrap support for F2SFV9 as seed ortholog is 100%.

Group of orthologs #2955. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubrum:79

P0CS40              	100.00%		F2SQF8              	100.00%
Bootstrap support for P0CS40 as seed ortholog is 100%.
Bootstrap support for F2SQF8 as seed ortholog is 100%.

Group of orthologs #2956. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubrum:79

Q5KPA5              	100.00%		F2SCH9              	100.00%
Bootstrap support for Q5KPA5 as seed ortholog is 100%.
Bootstrap support for F2SCH9 as seed ortholog is 100%.

Group of orthologs #2957. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubrum:79

Q5KFF4              	100.00%		F2SLP6              	100.00%
Bootstrap support for Q5KFF4 as seed ortholog is 100%.
Bootstrap support for F2SLP6 as seed ortholog is 100%.

Group of orthologs #2958. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubrum:79

Q5KCQ0              	100.00%		F2SQG8              	100.00%
Bootstrap support for Q5KCQ0 as seed ortholog is 100%.
Bootstrap support for F2SQG8 as seed ortholog is 100%.

Group of orthologs #2959. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubrum:35

Q5KCM2              	100.00%		F2SWR2              	100.00%
Bootstrap support for Q5KCM2 as seed ortholog is 100%.
Bootstrap support for F2SWR2 as seed ortholog is 79%.

Group of orthologs #2960. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubrum:79

Q5KL33              	100.00%		F2SP56              	100.00%
Bootstrap support for Q5KL33 as seed ortholog is 100%.
Bootstrap support for F2SP56 as seed ortholog is 100%.

Group of orthologs #2961. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubrum:79

Q5KAC1              	100.00%		F2T094              	100.00%
Bootstrap support for Q5KAC1 as seed ortholog is 100%.
Bootstrap support for F2T094 as seed ortholog is 100%.

Group of orthologs #2962. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubrum:79

Q5KPR0              	100.00%		F2SPF9              	100.00%
Bootstrap support for Q5KPR0 as seed ortholog is 100%.
Bootstrap support for F2SPF9 as seed ortholog is 100%.

Group of orthologs #2963. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubrum:79

Q5KIE3              	100.00%		F2SYI2              	100.00%
Bootstrap support for Q5KIE3 as seed ortholog is 100%.
Bootstrap support for F2SYI2 as seed ortholog is 100%.

Group of orthologs #2964. Best score 79 bits
Score difference with first non-orthologous sequence - C.neoformans:79 T.rubrum:79

Q5KPM9              	100.00%		F2SU75              	100.00%
Bootstrap support for Q5KPM9 as seed ortholog is 100%.
Bootstrap support for F2SU75 as seed ortholog is 100%.

Group of orthologs #2965. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 T.rubrum:78

P0CS00              	100.00%		F2SLF7              	100.00%
Bootstrap support for P0CS00 as seed ortholog is 100%.
Bootstrap support for F2SLF7 as seed ortholog is 100%.

Group of orthologs #2966. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 T.rubrum:78

P0CM36              	100.00%		F2SQK8              	100.00%
Bootstrap support for P0CM36 as seed ortholog is 100%.
Bootstrap support for F2SQK8 as seed ortholog is 100%.

Group of orthologs #2967. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 T.rubrum:78

Q5KCK5              	100.00%		F2SYS4              	100.00%
Bootstrap support for Q5KCK5 as seed ortholog is 100%.
Bootstrap support for F2SYS4 as seed ortholog is 100%.

Group of orthologs #2968. Best score 78 bits
Score difference with first non-orthologous sequence - C.neoformans:78 T.rubrum:33

Q5KKY9              	100.00%		F2SSV7              	100.00%
Bootstrap support for Q5KKY9 as seed ortholog is 100%.
Bootstrap support for F2SSV7 as seed ortholog is 83%.

Group of orthologs #2969. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 T.rubrum:77

Q5K6U0              	100.00%		F2SRB3              	100.00%
Q5K6V2              	7.11%		F2SMI6              	9.00%
Bootstrap support for Q5K6U0 as seed ortholog is 100%.
Bootstrap support for F2SRB3 as seed ortholog is 100%.

Group of orthologs #2970. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 T.rubrum:77

P0CR24              	100.00%		F2SHF0              	100.00%
Bootstrap support for P0CR24 as seed ortholog is 100%.
Bootstrap support for F2SHF0 as seed ortholog is 100%.

Group of orthologs #2971. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 T.rubrum:77

Q5KM56              	100.00%		F2SEF7              	100.00%
Bootstrap support for Q5KM56 as seed ortholog is 100%.
Bootstrap support for F2SEF7 as seed ortholog is 100%.

Group of orthologs #2972. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 T.rubrum:77

Q5K957              	100.00%		F2SR83              	100.00%
Bootstrap support for Q5K957 as seed ortholog is 100%.
Bootstrap support for F2SR83 as seed ortholog is 100%.

Group of orthologs #2973. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 T.rubrum:77

Q5KGE8              	100.00%		F2SKC4              	100.00%
Bootstrap support for Q5KGE8 as seed ortholog is 100%.
Bootstrap support for F2SKC4 as seed ortholog is 100%.

Group of orthologs #2974. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 T.rubrum:77

Q5KI25              	100.00%		F2SK72              	100.00%
Bootstrap support for Q5KI25 as seed ortholog is 100%.
Bootstrap support for F2SK72 as seed ortholog is 100%.

Group of orthologs #2975. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 T.rubrum:77

Q5KC98              	100.00%		F2SSF8              	100.00%
Bootstrap support for Q5KC98 as seed ortholog is 100%.
Bootstrap support for F2SSF8 as seed ortholog is 100%.

Group of orthologs #2976. Best score 77 bits
Score difference with first non-orthologous sequence - C.neoformans:77 T.rubrum:77

Q5KDZ5              	100.00%		F2T099              	100.00%
Bootstrap support for Q5KDZ5 as seed ortholog is 100%.
Bootstrap support for F2T099 as seed ortholog is 100%.

Group of orthologs #2977. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 T.rubrum:76

P0CM48              	100.00%		F2SG79              	100.00%
Bootstrap support for P0CM48 as seed ortholog is 100%.
Bootstrap support for F2SG79 as seed ortholog is 100%.

Group of orthologs #2978. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 T.rubrum:76

P0CP28              	100.00%		F2SQ82              	100.00%
Bootstrap support for P0CP28 as seed ortholog is 100%.
Bootstrap support for F2SQ82 as seed ortholog is 100%.

Group of orthologs #2979. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 T.rubrum:76

Q5KCZ3              	100.00%		F2SKN3              	100.00%
Bootstrap support for Q5KCZ3 as seed ortholog is 100%.
Bootstrap support for F2SKN3 as seed ortholog is 100%.

Group of orthologs #2980. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 T.rubrum:76

Q5K9Z2              	100.00%		F2SQY8              	100.00%
Bootstrap support for Q5K9Z2 as seed ortholog is 100%.
Bootstrap support for F2SQY8 as seed ortholog is 100%.

Group of orthologs #2981. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 T.rubrum:76

Q5KIW2              	100.00%		F2SPJ9              	100.00%
Bootstrap support for Q5KIW2 as seed ortholog is 100%.
Bootstrap support for F2SPJ9 as seed ortholog is 100%.

Group of orthologs #2982. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 T.rubrum:76

Q5KEE4              	100.00%		F2SU82              	100.00%
Bootstrap support for Q5KEE4 as seed ortholog is 100%.
Bootstrap support for F2SU82 as seed ortholog is 100%.

Group of orthologs #2983. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 T.rubrum:76

Q5KJC8              	100.00%		F2SR39              	100.00%
Bootstrap support for Q5KJC8 as seed ortholog is 100%.
Bootstrap support for F2SR39 as seed ortholog is 100%.

Group of orthologs #2984. Best score 76 bits
Score difference with first non-orthologous sequence - C.neoformans:76 T.rubrum:76

Q5KGD4              	100.00%		F2T0R4              	100.00%
Bootstrap support for Q5KGD4 as seed ortholog is 100%.
Bootstrap support for F2T0R4 as seed ortholog is 100%.

Group of orthologs #2985. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubrum:75

Q5K7K1              	100.00%		F2SI69              	100.00%
                    	       		F2SXH0              	39.51%
Bootstrap support for Q5K7K1 as seed ortholog is 100%.
Bootstrap support for F2SI69 as seed ortholog is 100%.

Group of orthologs #2986. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubrum:75

Q5K7G1              	100.00%		F2SVZ9              	100.00%
Q5K7H2              	56.21%		
Bootstrap support for Q5K7G1 as seed ortholog is 100%.
Bootstrap support for F2SVZ9 as seed ortholog is 100%.

Group of orthologs #2987. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubrum:75

Q5KAC0              	100.00%		F2SYN9              	100.00%
                    	       		F2SYN7              	65.52%
Bootstrap support for Q5KAC0 as seed ortholog is 100%.
Bootstrap support for F2SYN9 as seed ortholog is 100%.

Group of orthologs #2988. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubrum:75

Q5KPU8              	100.00%		F2SUV4              	100.00%
Q5KID3              	8.35%		
Bootstrap support for Q5KPU8 as seed ortholog is 100%.
Bootstrap support for F2SUV4 as seed ortholog is 100%.

Group of orthologs #2989. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubrum:75

Q5K8Y9              	100.00%		F2SCX4              	100.00%
Bootstrap support for Q5K8Y9 as seed ortholog is 100%.
Bootstrap support for F2SCX4 as seed ortholog is 100%.

Group of orthologs #2990. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubrum:75

Q5K6X6              	100.00%		F2SIM4              	100.00%
Bootstrap support for Q5K6X6 as seed ortholog is 100%.
Bootstrap support for F2SIM4 as seed ortholog is 100%.

Group of orthologs #2991. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubrum:75

Q5KF64              	100.00%		F2SDU5              	100.00%
Bootstrap support for Q5KF64 as seed ortholog is 100%.
Bootstrap support for F2SDU5 as seed ortholog is 100%.

Group of orthologs #2992. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubrum:75

Q5KIB0              	100.00%		F2SHT4              	100.00%
Bootstrap support for Q5KIB0 as seed ortholog is 100%.
Bootstrap support for F2SHT4 as seed ortholog is 100%.

Group of orthologs #2993. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubrum:75

Q5KF81              	100.00%		F2SY47              	100.00%
Bootstrap support for Q5KF81 as seed ortholog is 100%.
Bootstrap support for F2SY47 as seed ortholog is 100%.

Group of orthologs #2994. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubrum:75

Q5KGC2              	100.00%		F2SYC7              	100.00%
Bootstrap support for Q5KGC2 as seed ortholog is 100%.
Bootstrap support for F2SYC7 as seed ortholog is 100%.

Group of orthologs #2995. Best score 75 bits
Score difference with first non-orthologous sequence - C.neoformans:75 T.rubrum:75

Q5KJ44              	100.00%		F2T000              	100.00%
Bootstrap support for Q5KJ44 as seed ortholog is 100%.
Bootstrap support for F2T000 as seed ortholog is 100%.

Group of orthologs #2996. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:19 T.rubrum:74

Q5K862              	100.00%		F2SPI1              	100.00%
Q5KD32              	100.00%		
Q5KD31              	61.93%		
Q5K861              	61.33%		
Q5KJE2              	52.72%		
Q5KEN0              	39.85%		
Q5KH90              	35.35%		
Bootstrap support for Q5K862 as seed ortholog is 71%.
Alternative seed ortholog is Q5K8E7 (19 bits away from this cluster)
Bootstrap support for Q5KD32 as seed ortholog is 73%.
Alternative seed ortholog is Q5K8E7 (19 bits away from this cluster)
Bootstrap support for F2SPI1 as seed ortholog is 100%.

Group of orthologs #2997. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 T.rubrum:74

Q5KDY1              	100.00%		F2SMS6              	100.00%
Bootstrap support for Q5KDY1 as seed ortholog is 100%.
Bootstrap support for F2SMS6 as seed ortholog is 100%.

Group of orthologs #2998. Best score 74 bits
Score difference with first non-orthologous sequence - C.neoformans:74 T.rubrum:74

Q5KPL4              	100.00%		F2ST43              	100.00%
Bootstrap support for Q5KPL4 as seed ortholog is 100%.
Bootstrap support for F2ST43 as seed ortholog is 100%.

Group of orthologs #2999. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 T.rubrum:73

Q5KCP0              	100.00%		F2SEG4              	100.00%
                    	       		F2SIK4              	13.72%
                    	       		F2ST24              	9.20%
                    	       		F2SKZ8              	6.60%
Bootstrap support for Q5KCP0 as seed ortholog is 100%.
Bootstrap support for F2SEG4 as seed ortholog is 100%.

Group of orthologs #3000. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 T.rubrum:73

Q5KGM6              	100.00%		F2SCH3              	100.00%
Bootstrap support for Q5KGM6 as seed ortholog is 100%.
Bootstrap support for F2SCH3 as seed ortholog is 100%.

Group of orthologs #3001. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 T.rubrum:73

Q5KHB2              	100.00%		F2SFP8              	100.00%
Bootstrap support for Q5KHB2 as seed ortholog is 100%.
Bootstrap support for F2SFP8 as seed ortholog is 100%.

Group of orthologs #3002. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 T.rubrum:73

Q5KES2              	100.00%		F2SJF4              	100.00%
Bootstrap support for Q5KES2 as seed ortholog is 100%.
Bootstrap support for F2SJF4 as seed ortholog is 100%.

Group of orthologs #3003. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 T.rubrum:73

Q5KLT4              	100.00%		F2SDK0              	100.00%
Bootstrap support for Q5KLT4 as seed ortholog is 100%.
Bootstrap support for F2SDK0 as seed ortholog is 100%.

Group of orthologs #3004. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 T.rubrum:24

Q5KNW0              	100.00%		F2SDX1              	100.00%
Bootstrap support for Q5KNW0 as seed ortholog is 100%.
Bootstrap support for F2SDX1 as seed ortholog is 77%.

Group of orthologs #3005. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 T.rubrum:73

Q5KK86              	100.00%		F2SK83              	100.00%
Bootstrap support for Q5KK86 as seed ortholog is 100%.
Bootstrap support for F2SK83 as seed ortholog is 100%.

Group of orthologs #3006. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:73 T.rubrum:73

Q5KGX3              	100.00%		F2SUR3              	100.00%
Bootstrap support for Q5KGX3 as seed ortholog is 100%.
Bootstrap support for F2SUR3 as seed ortholog is 100%.

Group of orthologs #3007. Best score 73 bits
Score difference with first non-orthologous sequence - C.neoformans:20 T.rubrum:73

Q5KDP7              	100.00%		F2SZ72              	100.00%
Bootstrap support for Q5KDP7 as seed ortholog is 87%.
Bootstrap support for F2SZ72 as seed ortholog is 100%.

Group of orthologs #3008. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 T.rubrum:72

Q5KIC2              	100.00%		F2SGM9              	100.00%
P0CP76              	11.07%		
Bootstrap support for Q5KIC2 as seed ortholog is 100%.
Bootstrap support for F2SGM9 as seed ortholog is 100%.

Group of orthologs #3009. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 T.rubrum:72

Q5K8X5              	100.00%		F2SDP8              	100.00%
Bootstrap support for Q5K8X5 as seed ortholog is 100%.
Bootstrap support for F2SDP8 as seed ortholog is 100%.

Group of orthologs #3010. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 T.rubrum:72

Q5KLH1              	100.00%		F2SK65              	100.00%
Bootstrap support for Q5KLH1 as seed ortholog is 100%.
Bootstrap support for F2SK65 as seed ortholog is 100%.

Group of orthologs #3011. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 T.rubrum:72

Q5K792              	100.00%		F2SZI9              	100.00%
Bootstrap support for Q5K792 as seed ortholog is 100%.
Bootstrap support for F2SZI9 as seed ortholog is 100%.

Group of orthologs #3012. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 T.rubrum:72

P0CR82              	100.00%		F2T095              	100.00%
Bootstrap support for P0CR82 as seed ortholog is 100%.
Bootstrap support for F2T095 as seed ortholog is 100%.

Group of orthologs #3013. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:26 T.rubrum:72

Q5KNX3              	100.00%		F2SQL8              	100.00%
Bootstrap support for Q5KNX3 as seed ortholog is 77%.
Bootstrap support for F2SQL8 as seed ortholog is 100%.

Group of orthologs #3014. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 T.rubrum:72

Q5KIV8              	100.00%		F2SZ16              	100.00%
Bootstrap support for Q5KIV8 as seed ortholog is 100%.
Bootstrap support for F2SZ16 as seed ortholog is 100%.

Group of orthologs #3015. Best score 72 bits
Score difference with first non-orthologous sequence - C.neoformans:72 T.rubrum:72

Q5KNM3              	100.00%		F2SUP7              	100.00%
Bootstrap support for Q5KNM3 as seed ortholog is 100%.
Bootstrap support for F2SUP7 as seed ortholog is 100%.

Group of orthologs #3016. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 T.rubrum:71

Q5K9J5              	100.00%		F2SL84              	100.00%
Bootstrap support for Q5K9J5 as seed ortholog is 100%.
Bootstrap support for F2SL84 as seed ortholog is 100%.

Group of orthologs #3017. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 T.rubrum:71

Q5K6Z4              	100.00%		F2SNN0              	100.00%
Bootstrap support for Q5K6Z4 as seed ortholog is 100%.
Bootstrap support for F2SNN0 as seed ortholog is 100%.

Group of orthologs #3018. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 T.rubrum:71

P0CR66              	100.00%		F2SP10              	100.00%
Bootstrap support for P0CR66 as seed ortholog is 100%.
Bootstrap support for F2SP10 as seed ortholog is 100%.

Group of orthologs #3019. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 T.rubrum:71

Q5KBE4              	100.00%		F2SZE4              	100.00%
Bootstrap support for Q5KBE4 as seed ortholog is 100%.
Bootstrap support for F2SZE4 as seed ortholog is 100%.

Group of orthologs #3020. Best score 71 bits
Score difference with first non-orthologous sequence - C.neoformans:71 T.rubrum:8

Q5KKY6              	100.00%		F2T0J2              	100.00%
Bootstrap support for Q5KKY6 as seed ortholog is 100%.
Bootstrap support for F2T0J2 as seed ortholog is 56%.
Alternative seed ortholog is F2SCF3 (8 bits away from this cluster)

Group of orthologs #3021. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 T.rubrum:70

Q5KKB6              	100.00%		F2SL37              	100.00%
Q5KH91              	54.00%		F2SN72              	14.09%
                    	       		F2SFZ3              	13.82%
                    	       		F2SUY7              	12.09%
                    	       		F2SUW7              	6.91%
Bootstrap support for Q5KKB6 as seed ortholog is 100%.
Bootstrap support for F2SL37 as seed ortholog is 100%.

Group of orthologs #3022. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 T.rubrum:70

Q5KF85              	100.00%		F2SHZ6              	100.00%
Bootstrap support for Q5KF85 as seed ortholog is 100%.
Bootstrap support for F2SHZ6 as seed ortholog is 100%.

Group of orthologs #3023. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:26 T.rubrum:70

Q5KKT1              	100.00%		F2SEK7              	100.00%
Bootstrap support for Q5KKT1 as seed ortholog is 80%.
Bootstrap support for F2SEK7 as seed ortholog is 100%.

Group of orthologs #3024. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 T.rubrum:70

Q5KPC5              	100.00%		F2SEU4              	100.00%
Bootstrap support for Q5KPC5 as seed ortholog is 100%.
Bootstrap support for F2SEU4 as seed ortholog is 100%.

Group of orthologs #3025. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 T.rubrum:70

Q5KND1              	100.00%		F2SGV3              	100.00%
Bootstrap support for Q5KND1 as seed ortholog is 100%.
Bootstrap support for F2SGV3 as seed ortholog is 100%.

Group of orthologs #3026. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 T.rubrum:70

Q5KKF2              	100.00%		F2SLM6              	100.00%
Bootstrap support for Q5KKF2 as seed ortholog is 100%.
Bootstrap support for F2SLM6 as seed ortholog is 100%.

Group of orthologs #3027. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 T.rubrum:70

Q5KP59              	100.00%		F2SKU0              	100.00%
Bootstrap support for Q5KP59 as seed ortholog is 100%.
Bootstrap support for F2SKU0 as seed ortholog is 100%.

Group of orthologs #3028. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 T.rubrum:70

Q5KLZ3              	100.00%		F2SRZ4              	100.00%
Bootstrap support for Q5KLZ3 as seed ortholog is 100%.
Bootstrap support for F2SRZ4 as seed ortholog is 100%.

Group of orthologs #3029. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 T.rubrum:70

Q5KH45              	100.00%		F2SYD8              	100.00%
Bootstrap support for Q5KH45 as seed ortholog is 100%.
Bootstrap support for F2SYD8 as seed ortholog is 100%.

Group of orthologs #3030. Best score 70 bits
Score difference with first non-orthologous sequence - C.neoformans:70 T.rubrum:70

Q5KNH1              	100.00%		F2STU7              	100.00%
Bootstrap support for Q5KNH1 as seed ortholog is 100%.
Bootstrap support for F2STU7 as seed ortholog is 100%.

Group of orthologs #3031. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 T.rubrum:69

P0CN88              	100.00%		F2SDA9              	100.00%
Bootstrap support for P0CN88 as seed ortholog is 100%.
Bootstrap support for F2SDA9 as seed ortholog is 100%.

Group of orthologs #3032. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 T.rubrum:69

Q5KD82              	100.00%		F2SBN3              	100.00%
Bootstrap support for Q5KD82 as seed ortholog is 100%.
Bootstrap support for F2SBN3 as seed ortholog is 100%.

Group of orthologs #3033. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 T.rubrum:69

Q5K8M7              	100.00%		F2SGT8              	100.00%
Bootstrap support for Q5K8M7 as seed ortholog is 100%.
Bootstrap support for F2SGT8 as seed ortholog is 100%.

Group of orthologs #3034. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 T.rubrum:69

Q07801              	100.00%		F2SKA9              	100.00%
Bootstrap support for Q07801 as seed ortholog is 100%.
Bootstrap support for F2SKA9 as seed ortholog is 100%.

Group of orthologs #3035. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 T.rubrum:69

P0CR94              	100.00%		F2SNE2              	100.00%
Bootstrap support for P0CR94 as seed ortholog is 100%.
Bootstrap support for F2SNE2 as seed ortholog is 100%.

Group of orthologs #3036. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 T.rubrum:69

Q5K8D8              	100.00%		F2SQK6              	100.00%
Bootstrap support for Q5K8D8 as seed ortholog is 100%.
Bootstrap support for F2SQK6 as seed ortholog is 100%.

Group of orthologs #3037. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 T.rubrum:69

Q5K9M9              	100.00%		F2SPR6              	100.00%
Bootstrap support for Q5K9M9 as seed ortholog is 100%.
Bootstrap support for F2SPR6 as seed ortholog is 100%.

Group of orthologs #3038. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 T.rubrum:69

Q5KN76              	100.00%		F2SH08              	100.00%
Bootstrap support for Q5KN76 as seed ortholog is 100%.
Bootstrap support for F2SH08 as seed ortholog is 100%.

Group of orthologs #3039. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 T.rubrum:69

Q5K9I1              	100.00%		F2SVX1              	100.00%
Bootstrap support for Q5K9I1 as seed ortholog is 100%.
Bootstrap support for F2SVX1 as seed ortholog is 100%.

Group of orthologs #3040. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 T.rubrum:69

Q5KPM1              	100.00%		F2SLM5              	100.00%
Bootstrap support for Q5KPM1 as seed ortholog is 100%.
Bootstrap support for F2SLM5 as seed ortholog is 100%.

Group of orthologs #3041. Best score 69 bits
Score difference with first non-orthologous sequence - C.neoformans:69 T.rubrum:69

Q5KP82              	100.00%		F2SUC4              	100.00%
Bootstrap support for Q5KP82 as seed ortholog is 100%.
Bootstrap support for F2SUC4 as seed ortholog is 100%.

Group of orthologs #3042. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 T.rubrum:68

Q5KCH4              	100.00%		F2SBQ4              	100.00%
Bootstrap support for Q5KCH4 as seed ortholog is 100%.
Bootstrap support for F2SBQ4 as seed ortholog is 100%.

Group of orthologs #3043. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 T.rubrum:68

Q5KAI8              	100.00%		F2SVB8              	100.00%
Bootstrap support for Q5KAI8 as seed ortholog is 100%.
Bootstrap support for F2SVB8 as seed ortholog is 100%.

Group of orthologs #3044. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 T.rubrum:68

Q5K8Y3              	100.00%		F2SX52              	100.00%
Bootstrap support for Q5K8Y3 as seed ortholog is 100%.
Bootstrap support for F2SX52 as seed ortholog is 100%.

Group of orthologs #3045. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 T.rubrum:68

Q5KC61              	100.00%		F2SYI1              	100.00%
Bootstrap support for Q5KC61 as seed ortholog is 100%.
Bootstrap support for F2SYI1 as seed ortholog is 100%.

Group of orthologs #3046. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 T.rubrum:68

Q5KPE2              	100.00%		F2SUA9              	100.00%
Bootstrap support for Q5KPE2 as seed ortholog is 100%.
Bootstrap support for F2SUA9 as seed ortholog is 100%.

Group of orthologs #3047. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 T.rubrum:68

Q5KJ54              	100.00%		F2T070              	100.00%
Bootstrap support for Q5KJ54 as seed ortholog is 100%.
Bootstrap support for F2T070 as seed ortholog is 100%.

Group of orthologs #3048. Best score 68 bits
Score difference with first non-orthologous sequence - C.neoformans:68 T.rubrum:68

Q5KJZ1              	100.00%		F2T0Y0              	100.00%
Bootstrap support for Q5KJZ1 as seed ortholog is 100%.
Bootstrap support for F2T0Y0 as seed ortholog is 100%.

Group of orthologs #3049. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubrum:67

Q5K7L3              	100.00%		F2SNS3              	100.00%
Q5KL49              	100.00%		
Bootstrap support for Q5K7L3 as seed ortholog is 100%.
Bootstrap support for Q5KL49 as seed ortholog is 100%.
Bootstrap support for F2SNS3 as seed ortholog is 100%.

Group of orthologs #3050. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubrum:67

Q5KB19              	100.00%		F2SGH4              	100.00%
Bootstrap support for Q5KB19 as seed ortholog is 100%.
Bootstrap support for F2SGH4 as seed ortholog is 100%.

Group of orthologs #3051. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubrum:67

Q5KD84              	100.00%		F2SHA8              	100.00%
Bootstrap support for Q5KD84 as seed ortholog is 100%.
Bootstrap support for F2SHA8 as seed ortholog is 100%.

Group of orthologs #3052. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubrum:67

Q5KDU1              	100.00%		F2SIZ1              	100.00%
Bootstrap support for Q5KDU1 as seed ortholog is 100%.
Bootstrap support for F2SIZ1 as seed ortholog is 100%.

Group of orthologs #3053. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubrum:67

Q5KAV4              	100.00%		F2SM49              	100.00%
Bootstrap support for Q5KAV4 as seed ortholog is 100%.
Bootstrap support for F2SM49 as seed ortholog is 100%.

Group of orthologs #3054. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubrum:67

Q5KBE1              	100.00%		F2SM71              	100.00%
Bootstrap support for Q5KBE1 as seed ortholog is 100%.
Bootstrap support for F2SM71 as seed ortholog is 100%.

Group of orthologs #3055. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubrum:67

Q5KKT6              	100.00%		F2SEB2              	100.00%
Bootstrap support for Q5KKT6 as seed ortholog is 100%.
Bootstrap support for F2SEB2 as seed ortholog is 100%.

Group of orthologs #3056. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubrum:67

Q5K7U8              	100.00%		F2SRL9              	100.00%
Bootstrap support for Q5K7U8 as seed ortholog is 100%.
Bootstrap support for F2SRL9 as seed ortholog is 100%.

Group of orthologs #3057. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubrum:67

Q5KNL8              	100.00%		F2SHF8              	100.00%
Bootstrap support for Q5KNL8 as seed ortholog is 100%.
Bootstrap support for F2SHF8 as seed ortholog is 100%.

Group of orthologs #3058. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubrum:67

Q5KAX3              	100.00%		F2SUJ0              	100.00%
Bootstrap support for Q5KAX3 as seed ortholog is 100%.
Bootstrap support for F2SUJ0 as seed ortholog is 100%.

Group of orthologs #3059. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubrum:67

Q5KI43              	100.00%		F2SPY0              	100.00%
Bootstrap support for Q5KI43 as seed ortholog is 100%.
Bootstrap support for F2SPY0 as seed ortholog is 100%.

Group of orthologs #3060. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubrum:67

Q5KK18              	100.00%		F2SRZ8              	100.00%
Bootstrap support for Q5KK18 as seed ortholog is 100%.
Bootstrap support for F2SRZ8 as seed ortholog is 100%.

Group of orthologs #3061. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubrum:67

Q5KBL3              	100.00%		F2T0T1              	100.00%
Bootstrap support for Q5KBL3 as seed ortholog is 100%.
Bootstrap support for F2T0T1 as seed ortholog is 100%.

Group of orthologs #3062. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubrum:67

Q5KFC0              	100.00%		F2T0N1              	100.00%
Bootstrap support for Q5KFC0 as seed ortholog is 100%.
Bootstrap support for F2T0N1 as seed ortholog is 100%.

Group of orthologs #3063. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubrum:6

Q5KLH4              	100.00%		F2SWH0              	100.00%
Bootstrap support for Q5KLH4 as seed ortholog is 100%.
Bootstrap support for F2SWH0 as seed ortholog is 59%.
Alternative seed ortholog is F2SRU2 (6 bits away from this cluster)

Group of orthologs #3064. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubrum:67

Q5KNT2              	100.00%		F2SZM1              	100.00%
Bootstrap support for Q5KNT2 as seed ortholog is 100%.
Bootstrap support for F2SZM1 as seed ortholog is 100%.

Group of orthologs #3065. Best score 67 bits
Score difference with first non-orthologous sequence - C.neoformans:67 T.rubrum:67

Q5KPL1              	100.00%		F2T0E0              	100.00%
Bootstrap support for Q5KPL1 as seed ortholog is 100%.
Bootstrap support for F2T0E0 as seed ortholog is 100%.

Group of orthologs #3066. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 T.rubrum:66

Q5KBS6              	100.00%		F2SFJ6              	100.00%
Bootstrap support for Q5KBS6 as seed ortholog is 100%.
Bootstrap support for F2SFJ6 as seed ortholog is 100%.

Group of orthologs #3067. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 T.rubrum:66

Q5KEF0              	100.00%		F2SN30              	100.00%
Bootstrap support for Q5KEF0 as seed ortholog is 100%.
Bootstrap support for F2SN30 as seed ortholog is 100%.

Group of orthologs #3068. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 T.rubrum:66

Q5KJR2              	100.00%		F2SJK8              	100.00%
Bootstrap support for Q5KJR2 as seed ortholog is 100%.
Bootstrap support for F2SJK8 as seed ortholog is 100%.

Group of orthologs #3069. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 T.rubrum:66

P0CM84              	100.00%		F2T180              	100.00%
Bootstrap support for P0CM84 as seed ortholog is 100%.
Bootstrap support for F2T180 as seed ortholog is 100%.

Group of orthologs #3070. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 T.rubrum:66

Q5K9N4              	100.00%		F2SZ68              	100.00%
Bootstrap support for Q5K9N4 as seed ortholog is 100%.
Bootstrap support for F2SZ68 as seed ortholog is 100%.

Group of orthologs #3071. Best score 66 bits
Score difference with first non-orthologous sequence - C.neoformans:66 T.rubrum:66

Q5KIG8              	100.00%		F2SXH3              	100.00%
Bootstrap support for Q5KIG8 as seed ortholog is 100%.
Bootstrap support for F2SXH3 as seed ortholog is 100%.

Group of orthologs #3072. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 T.rubrum:65

Q5KL80              	100.00%		F2SUJ2              	100.00%
                    	       		F2STG6              	18.67%
Bootstrap support for Q5KL80 as seed ortholog is 100%.
Bootstrap support for F2SUJ2 as seed ortholog is 100%.

Group of orthologs #3073. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 T.rubrum:65

Q5K9R0              	100.00%		F2SCC9              	100.00%
Bootstrap support for Q5K9R0 as seed ortholog is 100%.
Bootstrap support for F2SCC9 as seed ortholog is 100%.

Group of orthologs #3074. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 T.rubrum:65

Q5KFQ9              	100.00%		F2SDJ2              	100.00%
Bootstrap support for Q5KFQ9 as seed ortholog is 100%.
Bootstrap support for F2SDJ2 as seed ortholog is 100%.

Group of orthologs #3075. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 T.rubrum:65

P0CR42              	100.00%		F2SUH4              	100.00%
Bootstrap support for P0CR42 as seed ortholog is 100%.
Bootstrap support for F2SUH4 as seed ortholog is 100%.

Group of orthologs #3076. Best score 65 bits
Score difference with first non-orthologous sequence - C.neoformans:65 T.rubrum:65

Q5KGI7              	100.00%		F2SWM9              	100.00%
Bootstrap support for Q5KGI7 as seed ortholog is 100%.
Bootstrap support for F2SWM9 as seed ortholog is 100%.

Group of orthologs #3077. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 T.rubrum:64

Q5KJW3              	100.00%		F2SE35              	100.00%
Bootstrap support for Q5KJW3 as seed ortholog is 100%.
Bootstrap support for F2SE35 as seed ortholog is 100%.

Group of orthologs #3078. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 T.rubrum:64

Q5KDG5              	100.00%		F2SMS7              	100.00%
Bootstrap support for Q5KDG5 as seed ortholog is 100%.
Bootstrap support for F2SMS7 as seed ortholog is 100%.

Group of orthologs #3079. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 T.rubrum:64

Q5K768              	100.00%		F2STY2              	100.00%
Bootstrap support for Q5K768 as seed ortholog is 100%.
Bootstrap support for F2STY2 as seed ortholog is 100%.

Group of orthologs #3080. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 T.rubrum:64

Q5KNX8              	100.00%		F2SGA7              	100.00%
Bootstrap support for Q5KNX8 as seed ortholog is 100%.
Bootstrap support for F2SGA7 as seed ortholog is 100%.

Group of orthologs #3081. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 T.rubrum:64

Q5KBT0              	100.00%		F2STW6              	100.00%
Bootstrap support for Q5KBT0 as seed ortholog is 100%.
Bootstrap support for F2STW6 as seed ortholog is 100%.

Group of orthologs #3082. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 T.rubrum:64

Q5K783              	100.00%		F2T052              	100.00%
Bootstrap support for Q5K783 as seed ortholog is 100%.
Bootstrap support for F2T052 as seed ortholog is 100%.

Group of orthologs #3083. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 T.rubrum:64

Q5KDL6              	100.00%		F2SUK8              	100.00%
Bootstrap support for Q5KDL6 as seed ortholog is 100%.
Bootstrap support for F2SUK8 as seed ortholog is 100%.

Group of orthologs #3084. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:11 T.rubrum:64

Q5KLL6              	100.00%		F2SMT1              	100.00%
Bootstrap support for Q5KLL6 as seed ortholog is 63%.
Alternative seed ortholog is Q5KLC8 (11 bits away from this cluster)
Bootstrap support for F2SMT1 as seed ortholog is 100%.

Group of orthologs #3085. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 T.rubrum:64

Q5KM06              	100.00%		F2SMU6              	100.00%
Bootstrap support for Q5KM06 as seed ortholog is 100%.
Bootstrap support for F2SMU6 as seed ortholog is 100%.

Group of orthologs #3086. Best score 64 bits
Score difference with first non-orthologous sequence - C.neoformans:64 T.rubrum:64

Q5KNL6              	100.00%		F2SQ49              	100.00%
Bootstrap support for Q5KNL6 as seed ortholog is 100%.
Bootstrap support for F2SQ49 as seed ortholog is 100%.

Group of orthologs #3087. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 T.rubrum:63

Q5KBR8              	100.00%		F2SE06              	100.00%
Bootstrap support for Q5KBR8 as seed ortholog is 100%.
Bootstrap support for F2SE06 as seed ortholog is 100%.

Group of orthologs #3088. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 T.rubrum:63

Q5KES3              	100.00%		F2SD43              	100.00%
Bootstrap support for Q5KES3 as seed ortholog is 100%.
Bootstrap support for F2SD43 as seed ortholog is 100%.

Group of orthologs #3089. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 T.rubrum:63

Q5KJD8              	100.00%		F2SDJ3              	100.00%
Bootstrap support for Q5KJD8 as seed ortholog is 100%.
Bootstrap support for F2SDJ3 as seed ortholog is 100%.

Group of orthologs #3090. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 T.rubrum:63

Q5KG14              	100.00%		F2SI80              	100.00%
Bootstrap support for Q5KG14 as seed ortholog is 100%.
Bootstrap support for F2SI80 as seed ortholog is 100%.

Group of orthologs #3091. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 T.rubrum:63

Q5KME6              	100.00%		F2SDZ6              	100.00%
Bootstrap support for Q5KME6 as seed ortholog is 100%.
Bootstrap support for F2SDZ6 as seed ortholog is 100%.

Group of orthologs #3092. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 T.rubrum:63

Q5K9F0              	100.00%		F2SX42              	100.00%
Bootstrap support for Q5K9F0 as seed ortholog is 100%.
Bootstrap support for F2SX42 as seed ortholog is 100%.

Group of orthologs #3093. Best score 63 bits
Score difference with first non-orthologous sequence - C.neoformans:63 T.rubrum:63

Q5KPX4              	100.00%		F2SKI4              	100.00%
Bootstrap support for Q5KPX4 as seed ortholog is 100%.
Bootstrap support for F2SKI4 as seed ortholog is 100%.

Group of orthologs #3094. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 T.rubrum:62

Q5KKW0              	100.00%		F2SMF1              	100.00%
Q5KD69              	7.04%		
Bootstrap support for Q5KKW0 as seed ortholog is 100%.
Bootstrap support for F2SMF1 as seed ortholog is 100%.

Group of orthologs #3095. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 T.rubrum:62

Q5K9K3              	100.00%		F2SHM2              	100.00%
Bootstrap support for Q5K9K3 as seed ortholog is 100%.
Bootstrap support for F2SHM2 as seed ortholog is 100%.

Group of orthologs #3096. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 T.rubrum:62

Q5KAA6              	100.00%		F2SK57              	100.00%
Bootstrap support for Q5KAA6 as seed ortholog is 100%.
Bootstrap support for F2SK57 as seed ortholog is 100%.

Group of orthologs #3097. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 T.rubrum:62

Q5K848              	100.00%		F2SRA0              	100.00%
Bootstrap support for Q5K848 as seed ortholog is 100%.
Bootstrap support for F2SRA0 as seed ortholog is 100%.

Group of orthologs #3098. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 T.rubrum:62

Q5KN26              	100.00%		F2SND4              	100.00%
Bootstrap support for Q5KN26 as seed ortholog is 100%.
Bootstrap support for F2SND4 as seed ortholog is 100%.

Group of orthologs #3099. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 T.rubrum:62

Q5KIK7              	100.00%		F2SYE6              	100.00%
Bootstrap support for Q5KIK7 as seed ortholog is 100%.
Bootstrap support for F2SYE6 as seed ortholog is 100%.

Group of orthologs #3100. Best score 62 bits
Score difference with first non-orthologous sequence - C.neoformans:62 T.rubrum:62

Q5KK23              	100.00%		F2T0F2              	100.00%
Bootstrap support for Q5KK23 as seed ortholog is 100%.
Bootstrap support for F2T0F2 as seed ortholog is 100%.

Group of orthologs #3101. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 T.rubrum:61

Q5K9H7              	100.00%		F2SLA8              	100.00%
Q5K9I7              	8.96%		
Bootstrap support for Q5K9H7 as seed ortholog is 100%.
Bootstrap support for F2SLA8 as seed ortholog is 100%.

Group of orthologs #3102. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 T.rubrum:61

Q5K9S0              	100.00%		F2SCM3              	100.00%
Bootstrap support for Q5K9S0 as seed ortholog is 100%.
Bootstrap support for F2SCM3 as seed ortholog is 100%.

Group of orthologs #3103. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 T.rubrum:61

Q5K9Q9              	100.00%		F2SD74              	100.00%
Bootstrap support for Q5K9Q9 as seed ortholog is 100%.
Bootstrap support for F2SD74 as seed ortholog is 100%.

Group of orthologs #3104. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 T.rubrum:61

Q5KA73              	100.00%		F2SEW0              	100.00%
Bootstrap support for Q5KA73 as seed ortholog is 100%.
Bootstrap support for F2SEW0 as seed ortholog is 100%.

Group of orthologs #3105. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 T.rubrum:61

P0CP04              	100.00%		F2SLA9              	100.00%
Bootstrap support for P0CP04 as seed ortholog is 100%.
Bootstrap support for F2SLA9 as seed ortholog is 100%.

Group of orthologs #3106. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 T.rubrum:61

Q5K8Y7              	100.00%		F2SIU7              	100.00%
Bootstrap support for Q5K8Y7 as seed ortholog is 100%.
Bootstrap support for F2SIU7 as seed ortholog is 100%.

Group of orthologs #3107. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 T.rubrum:61

Q5K8X7              	100.00%		F2SJW4              	100.00%
Bootstrap support for Q5K8X7 as seed ortholog is 100%.
Bootstrap support for F2SJW4 as seed ortholog is 100%.

Group of orthologs #3108. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 T.rubrum:61

Q5KCM1              	100.00%		F2SIJ7              	100.00%
Bootstrap support for Q5KCM1 as seed ortholog is 100%.
Bootstrap support for F2SIJ7 as seed ortholog is 100%.

Group of orthologs #3109. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 T.rubrum:61

Q5KCB1              	100.00%		F2SR42              	100.00%
Bootstrap support for Q5KCB1 as seed ortholog is 100%.
Bootstrap support for F2SR42 as seed ortholog is 100%.

Group of orthologs #3110. Best score 61 bits
Score difference with first non-orthologous sequence - C.neoformans:61 T.rubrum:61

Q5KGC5              	100.00%		F2STM4              	100.00%
Bootstrap support for Q5KGC5 as seed ortholog is 100%.
Bootstrap support for F2STM4 as seed ortholog is 100%.

Group of orthologs #3111. Best score 60 bits
Score difference with first non-orthologous sequence - C.neoformans:60 T.rubrum:60

Q5KB74              	100.00%		F2SDZ2              	100.00%
Bootstrap support for Q5KB74 as seed ortholog is 100%.
Bootstrap support for F2SDZ2 as seed ortholog is 100%.

Group of orthologs #3112. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 T.rubrum:59

Q5KK80              	100.00%		F2SU98              	100.00%
                    	       		F2SBU5              	8.33%
Bootstrap support for Q5KK80 as seed ortholog is 100%.
Bootstrap support for F2SU98 as seed ortholog is 100%.

Group of orthologs #3113. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 T.rubrum:59

Q5KAN0              	100.00%		F2SD80              	100.00%
Bootstrap support for Q5KAN0 as seed ortholog is 100%.
Bootstrap support for F2SD80 as seed ortholog is 100%.

Group of orthologs #3114. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 T.rubrum:59

Q5K9F3              	100.00%		F2SK37              	100.00%
Bootstrap support for Q5K9F3 as seed ortholog is 100%.
Bootstrap support for F2SK37 as seed ortholog is 100%.

Group of orthologs #3115. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 T.rubrum:59

Q5KI26              	100.00%		F2SEF5              	100.00%
Bootstrap support for Q5KI26 as seed ortholog is 100%.
Bootstrap support for F2SEF5 as seed ortholog is 100%.

Group of orthologs #3116. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 T.rubrum:59

Q5KFB4              	100.00%		F2SH78              	100.00%
Bootstrap support for Q5KFB4 as seed ortholog is 100%.
Bootstrap support for F2SH78 as seed ortholog is 100%.

Group of orthologs #3117. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 T.rubrum:59

Q5KJF1              	100.00%		F2SE34              	100.00%
Bootstrap support for Q5KJF1 as seed ortholog is 100%.
Bootstrap support for F2SE34 as seed ortholog is 100%.

Group of orthologs #3118. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 T.rubrum:59

Q5KJ45              	100.00%		F2SG01              	100.00%
Bootstrap support for Q5KJ45 as seed ortholog is 100%.
Bootstrap support for F2SG01 as seed ortholog is 100%.

Group of orthologs #3119. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 T.rubrum:59

Q5KL18              	100.00%		F2SI87              	100.00%
Bootstrap support for Q5KL18 as seed ortholog is 100%.
Bootstrap support for F2SI87 as seed ortholog is 100%.

Group of orthologs #3120. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 T.rubrum:59

Q5KFV7              	100.00%		F2SS31              	100.00%
Bootstrap support for Q5KFV7 as seed ortholog is 100%.
Bootstrap support for F2SS31 as seed ortholog is 100%.

Group of orthologs #3121. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 T.rubrum:59

Q5KFP0              	100.00%		F2ST26              	100.00%
Bootstrap support for Q5KFP0 as seed ortholog is 100%.
Bootstrap support for F2ST26 as seed ortholog is 100%.

Group of orthologs #3122. Best score 59 bits
Score difference with first non-orthologous sequence - C.neoformans:59 T.rubrum:59

Q5KNJ0              	100.00%		F2SNI5              	100.00%
Bootstrap support for Q5KNJ0 as seed ortholog is 100%.
Bootstrap support for F2SNI5 as seed ortholog is 100%.

Group of orthologs #3123. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 T.rubrum:58

Q5K7S6              	100.00%		F2SQI7              	100.00%
Bootstrap support for Q5K7S6 as seed ortholog is 100%.
Bootstrap support for F2SQI7 as seed ortholog is 100%.

Group of orthologs #3124. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 T.rubrum:58

Q5KHB6              	100.00%		F2SNR8              	100.00%
Bootstrap support for Q5KHB6 as seed ortholog is 100%.
Bootstrap support for F2SNR8 as seed ortholog is 100%.

Group of orthologs #3125. Best score 58 bits
Score difference with first non-orthologous sequence - C.neoformans:58 T.rubrum:58

Q5KNR1              	100.00%		F2SKN2              	100.00%
Bootstrap support for Q5KNR1 as seed ortholog is 100%.
Bootstrap support for F2SKN2 as seed ortholog is 100%.

Group of orthologs #3126. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 T.rubrum:57

Q5K9B7              	100.00%		F2SFA2              	100.00%
Bootstrap support for Q5K9B7 as seed ortholog is 100%.
Bootstrap support for F2SFA2 as seed ortholog is 100%.

Group of orthologs #3127. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 T.rubrum:57

Q5KE02              	100.00%		F2SMC0              	100.00%
Bootstrap support for Q5KE02 as seed ortholog is 100%.
Bootstrap support for F2SMC0 as seed ortholog is 100%.

Group of orthologs #3128. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 T.rubrum:57

Q5KEZ4              	100.00%		F2SS87              	100.00%
Bootstrap support for Q5KEZ4 as seed ortholog is 100%.
Bootstrap support for F2SS87 as seed ortholog is 100%.

Group of orthologs #3129. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 T.rubrum:57

Q5KMS6              	100.00%		F2SLS0              	100.00%
Bootstrap support for Q5KMS6 as seed ortholog is 100%.
Bootstrap support for F2SLS0 as seed ortholog is 100%.

Group of orthologs #3130. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 T.rubrum:57

Q5KJE5              	100.00%		F2SSH2              	100.00%
Bootstrap support for Q5KJE5 as seed ortholog is 100%.
Bootstrap support for F2SSH2 as seed ortholog is 100%.

Group of orthologs #3131. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 T.rubrum:57

Q5KMK9              	100.00%		F2STD8              	100.00%
Bootstrap support for Q5KMK9 as seed ortholog is 100%.
Bootstrap support for F2STD8 as seed ortholog is 100%.

Group of orthologs #3132. Best score 57 bits
Score difference with first non-orthologous sequence - C.neoformans:57 T.rubrum:57

Q5KLQ0              	100.00%		F2SXM3              	100.00%
Bootstrap support for Q5KLQ0 as seed ortholog is 100%.
Bootstrap support for F2SXM3 as seed ortholog is 100%.

Group of orthologs #3133. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 T.rubrum:56

Q5K7P3              	100.00%		F2SI37              	100.00%
Bootstrap support for Q5K7P3 as seed ortholog is 100%.
Bootstrap support for F2SI37 as seed ortholog is 100%.

Group of orthologs #3134. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 T.rubrum:56

Q5KE32              	100.00%		F2SS11              	100.00%
Bootstrap support for Q5KE32 as seed ortholog is 100%.
Bootstrap support for F2SS11 as seed ortholog is 100%.

Group of orthologs #3135. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 T.rubrum:56

Q5KPD4              	100.00%		F2SK22              	100.00%
Bootstrap support for Q5KPD4 as seed ortholog is 100%.
Bootstrap support for F2SK22 as seed ortholog is 100%.

Group of orthologs #3136. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 T.rubrum:56

Q5KMK7              	100.00%		F2SPM7              	100.00%
Bootstrap support for Q5KMK7 as seed ortholog is 100%.
Bootstrap support for F2SPM7 as seed ortholog is 100%.

Group of orthologs #3137. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 T.rubrum:56

Q5KM59              	100.00%		F2SR75              	100.00%
Bootstrap support for Q5KM59 as seed ortholog is 100%.
Bootstrap support for F2SR75 as seed ortholog is 100%.

Group of orthologs #3138. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 T.rubrum:56

Q5KKF4              	100.00%		F2SU69              	100.00%
Bootstrap support for Q5KKF4 as seed ortholog is 100%.
Bootstrap support for F2SU69 as seed ortholog is 100%.

Group of orthologs #3139. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 T.rubrum:56

Q5KMT7              	100.00%		F2SSJ4              	100.00%
Bootstrap support for Q5KMT7 as seed ortholog is 100%.
Bootstrap support for F2SSJ4 as seed ortholog is 100%.

Group of orthologs #3140. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 T.rubrum:56

Q5KNK3              	100.00%		F2SSB3              	100.00%
Bootstrap support for Q5KNK3 as seed ortholog is 100%.
Bootstrap support for F2SSB3 as seed ortholog is 100%.

Group of orthologs #3141. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 T.rubrum:56

Q5KNS3              	100.00%		F2SU70              	100.00%
Bootstrap support for Q5KNS3 as seed ortholog is 100%.
Bootstrap support for F2SU70 as seed ortholog is 100%.

Group of orthologs #3142. Best score 56 bits
Score difference with first non-orthologous sequence - C.neoformans:56 T.rubrum:56

Q5KK91              	100.00%		F2SZR7              	100.00%
Bootstrap support for Q5KK91 as seed ortholog is 100%.
Bootstrap support for F2SZR7 as seed ortholog is 100%.

Group of orthologs #3143. Best score 55 bits
Score difference with first non-orthologous sequence - C.neoformans:55 T.rubrum:55

Q5KB82              	100.00%		F2SKC1              	100.00%
Bootstrap support for Q5KB82 as seed ortholog is 100%.
Bootstrap support for F2SKC1 as seed ortholog is 100%.

Group of orthologs #3144. Best score 55 bits
Score difference with first non-orthologous sequence - C.neoformans:55 T.rubrum:55

Q5KH60              	100.00%		F2SG78              	100.00%
Bootstrap support for Q5KH60 as seed ortholog is 100%.
Bootstrap support for F2SG78 as seed ortholog is 100%.

Group of orthologs #3145. Best score 55 bits
Score difference with first non-orthologous sequence - C.neoformans:55 T.rubrum:55

Q5KEH6              	100.00%		F2SK64              	100.00%
Bootstrap support for Q5KEH6 as seed ortholog is 100%.
Bootstrap support for F2SK64 as seed ortholog is 100%.

Group of orthologs #3146. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubrum:54

P0CM70              	100.00%		F2SGW3              	100.00%
Bootstrap support for P0CM70 as seed ortholog is 100%.
Bootstrap support for F2SGW3 as seed ortholog is 100%.

Group of orthologs #3147. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubrum:54

Q5KCT7              	100.00%		F2SJA0              	100.00%
Bootstrap support for Q5KCT7 as seed ortholog is 100%.
Bootstrap support for F2SJA0 as seed ortholog is 100%.

Group of orthologs #3148. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubrum:54

Q5KJV4              	100.00%		F2SE92              	100.00%
Bootstrap support for Q5KJV4 as seed ortholog is 100%.
Bootstrap support for F2SE92 as seed ortholog is 100%.

Group of orthologs #3149. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubrum:54

Q5KIZ7              	100.00%		F2SF69              	100.00%
Bootstrap support for Q5KIZ7 as seed ortholog is 100%.
Bootstrap support for F2SF69 as seed ortholog is 100%.

Group of orthologs #3150. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubrum:54

Q5KG80              	100.00%		F2SI00              	100.00%
Bootstrap support for Q5KG80 as seed ortholog is 100%.
Bootstrap support for F2SI00 as seed ortholog is 100%.

Group of orthologs #3151. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubrum:54

Q5KBG8              	100.00%		F2SPK3              	100.00%
Bootstrap support for Q5KBG8 as seed ortholog is 100%.
Bootstrap support for F2SPK3 as seed ortholog is 100%.

Group of orthologs #3152. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubrum:54

Q5KLP6              	100.00%		F2SIL2              	100.00%
Bootstrap support for Q5KLP6 as seed ortholog is 100%.
Bootstrap support for F2SIL2 as seed ortholog is 100%.

Group of orthologs #3153. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubrum:54

Q5KD49              	100.00%		F2SVM9              	100.00%
Bootstrap support for Q5KD49 as seed ortholog is 100%.
Bootstrap support for F2SVM9 as seed ortholog is 100%.

Group of orthologs #3154. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubrum:54

Q5KKN6              	100.00%		F2SVY4              	100.00%
Bootstrap support for Q5KKN6 as seed ortholog is 100%.
Bootstrap support for F2SVY4 as seed ortholog is 100%.

Group of orthologs #3155. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubrum:54

Q5KJR5              	100.00%		F2SXU4              	100.00%
Bootstrap support for Q5KJR5 as seed ortholog is 100%.
Bootstrap support for F2SXU4 as seed ortholog is 100%.

Group of orthologs #3156. Best score 54 bits
Score difference with first non-orthologous sequence - C.neoformans:54 T.rubrum:54

Q5KLG4              	100.00%		F2SZ41              	100.00%
Bootstrap support for Q5KLG4 as seed ortholog is 100%.
Bootstrap support for F2SZ41 as seed ortholog is 100%.

Group of orthologs #3157. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 T.rubrum:53

Q5KBF4              	100.00%		F2SEI0              	100.00%
Bootstrap support for Q5KBF4 as seed ortholog is 100%.
Bootstrap support for F2SEI0 as seed ortholog is 100%.

Group of orthologs #3158. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 T.rubrum:53

Q5KMT2              	100.00%		F2SDC5              	100.00%
Bootstrap support for Q5KMT2 as seed ortholog is 100%.
Bootstrap support for F2SDC5 as seed ortholog is 100%.

Group of orthologs #3159. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 T.rubrum:53

Q5KEK4              	100.00%		F2SQ84              	100.00%
Bootstrap support for Q5KEK4 as seed ortholog is 100%.
Bootstrap support for F2SQ84 as seed ortholog is 100%.

Group of orthologs #3160. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 T.rubrum:53

Q5KIN2              	100.00%		F2SMF9              	100.00%
Bootstrap support for Q5KIN2 as seed ortholog is 100%.
Bootstrap support for F2SMF9 as seed ortholog is 100%.

Group of orthologs #3161. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 T.rubrum:53

Q5KC66              	100.00%		F2STQ8              	100.00%
Bootstrap support for Q5KC66 as seed ortholog is 100%.
Bootstrap support for F2STQ8 as seed ortholog is 100%.

Group of orthologs #3162. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 T.rubrum:53

Q5KGJ2              	100.00%		F2SRY6              	100.00%
Bootstrap support for Q5KGJ2 as seed ortholog is 100%.
Bootstrap support for F2SRY6 as seed ortholog is 100%.

Group of orthologs #3163. Best score 53 bits
Score difference with first non-orthologous sequence - C.neoformans:53 T.rubrum:53

Q5KI39              	100.00%		F2SQZ2              	100.00%
Bootstrap support for Q5KI39 as seed ortholog is 100%.
Bootstrap support for F2SQZ2 as seed ortholog is 100%.

Group of orthologs #3164. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 T.rubrum:52

Q5K6T8              	100.00%		F2SHD3              	100.00%
Bootstrap support for Q5K6T8 as seed ortholog is 100%.
Bootstrap support for F2SHD3 as seed ortholog is 100%.

Group of orthologs #3165. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 T.rubrum:52

Q5KCJ7              	100.00%		F2SH80              	100.00%
Bootstrap support for Q5KCJ7 as seed ortholog is 100%.
Bootstrap support for F2SH80 as seed ortholog is 100%.

Group of orthologs #3166. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 T.rubrum:52

Q5KCP7              	100.00%		F2SS85              	100.00%
Bootstrap support for Q5KCP7 as seed ortholog is 100%.
Bootstrap support for F2SS85 as seed ortholog is 100%.

Group of orthologs #3167. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 T.rubrum:52

Q5KAK2              	100.00%		F2SV68              	100.00%
Bootstrap support for Q5KAK2 as seed ortholog is 100%.
Bootstrap support for F2SV68 as seed ortholog is 100%.

Group of orthologs #3168. Best score 52 bits
Score difference with first non-orthologous sequence - C.neoformans:52 T.rubrum:52

Q5KGD5              	100.00%		F2SRG6              	100.00%
Bootstrap support for Q5KGD5 as seed ortholog is 100%.
Bootstrap support for F2SRG6 as seed ortholog is 100%.

Group of orthologs #3169. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 T.rubrum:51

Q5KC40              	100.00%		F2SHA5              	100.00%
Bootstrap support for Q5KC40 as seed ortholog is 100%.
Bootstrap support for F2SHA5 as seed ortholog is 100%.

Group of orthologs #3170. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 T.rubrum:51

Q5KBG6              	100.00%		F2SJ02              	100.00%
Bootstrap support for Q5KBG6 as seed ortholog is 100%.
Bootstrap support for F2SJ02 as seed ortholog is 100%.

Group of orthologs #3171. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 T.rubrum:51

Q5KPZ7              	100.00%		F2SGU9              	100.00%
Bootstrap support for Q5KPZ7 as seed ortholog is 100%.
Bootstrap support for F2SGU9 as seed ortholog is 100%.

Group of orthologs #3172. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 T.rubrum:51

Q5KHC2              	100.00%		F2SXV0              	100.00%
Bootstrap support for Q5KHC2 as seed ortholog is 100%.
Bootstrap support for F2SXV0 as seed ortholog is 100%.

Group of orthologs #3173. Best score 51 bits
Score difference with first non-orthologous sequence - C.neoformans:51 T.rubrum:51

Q5KQ66              	100.00%		F2SW37              	100.00%
Bootstrap support for Q5KQ66 as seed ortholog is 100%.
Bootstrap support for F2SW37 as seed ortholog is 100%.

Group of orthologs #3174. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 T.rubrum:50

Q5KC46              	100.00%		F2SDE8              	100.00%
Bootstrap support for Q5KC46 as seed ortholog is 100%.
Bootstrap support for F2SDE8 as seed ortholog is 100%.

Group of orthologs #3175. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 T.rubrum:50

P0CS24              	100.00%		F2SLV5              	100.00%
Bootstrap support for P0CS24 as seed ortholog is 100%.
Bootstrap support for F2SLV5 as seed ortholog is 100%.

Group of orthologs #3176. Best score 50 bits
Score difference with first non-orthologous sequence - C.neoformans:50 T.rubrum:50

Q5K9P6              	100.00%		F2SLS5              	100.00%
Bootstrap support for Q5K9P6 as seed ortholog is 100%.
Bootstrap support for F2SLS5 as seed ortholog is 100%.

Group of orthologs #3177. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 T.rubrum:49

Q5K7A2              	100.00%		F2SNT9              	100.00%
Q5KNL4              	23.12%		
Q5KN09              	16.13%		
Bootstrap support for Q5K7A2 as seed ortholog is 100%.
Bootstrap support for F2SNT9 as seed ortholog is 100%.

Group of orthologs #3178. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 T.rubrum:49

Q5KL81              	100.00%		F2SC85              	100.00%
Bootstrap support for Q5KL81 as seed ortholog is 100%.
Bootstrap support for F2SC85 as seed ortholog is 100%.

Group of orthologs #3179. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 T.rubrum:49

Q5KH53              	100.00%		F2SP34              	100.00%
Bootstrap support for Q5KH53 as seed ortholog is 100%.
Bootstrap support for F2SP34 as seed ortholog is 100%.

Group of orthologs #3180. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 T.rubrum:49

Q5KQ05              	100.00%		F2SHY8              	100.00%
Bootstrap support for Q5KQ05 as seed ortholog is 100%.
Bootstrap support for F2SHY8 as seed ortholog is 100%.

Group of orthologs #3181. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 T.rubrum:49

Q5KH14              	100.00%		F2SQF4              	100.00%
Bootstrap support for Q5KH14 as seed ortholog is 100%.
Bootstrap support for F2SQF4 as seed ortholog is 100%.

Group of orthologs #3182. Best score 49 bits
Score difference with first non-orthologous sequence - C.neoformans:49 T.rubrum:49

Q5KIM9              	100.00%		F2SZH9              	100.00%
Bootstrap support for Q5KIM9 as seed ortholog is 100%.
Bootstrap support for F2SZH9 as seed ortholog is 100%.

Group of orthologs #3183. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 T.rubrum:47

Q5K9I9              	100.00%		F2STN2              	100.00%
Bootstrap support for Q5K9I9 as seed ortholog is 100%.
Bootstrap support for F2STN2 as seed ortholog is 100%.

Group of orthologs #3184. Best score 47 bits
Score difference with first non-orthologous sequence - C.neoformans:47 T.rubrum:47

Q5KHD2              	100.00%		F2SRS9              	100.00%
Bootstrap support for Q5KHD2 as seed ortholog is 100%.
Bootstrap support for F2SRS9 as seed ortholog is 100%.

Group of orthologs #3185. Best score 46 bits
Score difference with first non-orthologous sequence - C.neoformans:46 T.rubrum:46

Q5KHR2              	100.00%		F2SF29              	100.00%
Bootstrap support for Q5KHR2 as seed ortholog is 100%.
Bootstrap support for F2SF29 as seed ortholog is 100%.

Group of orthologs #3186. Best score 46 bits
Score difference with first non-orthologous sequence - C.neoformans:46 T.rubrum:46

Q5KIQ2              	100.00%		F2SSH9              	100.00%
Bootstrap support for Q5KIQ2 as seed ortholog is 100%.
Bootstrap support for F2SSH9 as seed ortholog is 100%.

Group of orthologs #3187. Best score 46 bits
Score difference with first non-orthologous sequence - C.neoformans:46 T.rubrum:46

Q5KJF5              	100.00%		F2SRV7              	100.00%
Bootstrap support for Q5KJF5 as seed ortholog is 100%.
Bootstrap support for F2SRV7 as seed ortholog is 100%.

Group of orthologs #3188. Best score 46 bits
Score difference with first non-orthologous sequence - C.neoformans:46 T.rubrum:46

Q5KP21              	100.00%		F2SYT1              	100.00%
Bootstrap support for Q5KP21 as seed ortholog is 100%.
Bootstrap support for F2SYT1 as seed ortholog is 100%.

Group of orthologs #3189. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 T.rubrum:45

Q5KG53              	100.00%		F2SRC3              	100.00%
Q5KEM9              	21.97%		
Q5KLC1              	21.97%		
Q5KFZ8              	21.45%		
Q5KA13              	12.11%		
Q5KD24              	6.97%		
Bootstrap support for Q5KG53 as seed ortholog is 100%.
Bootstrap support for F2SRC3 as seed ortholog is 100%.

Group of orthologs #3190. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 T.rubrum:45

Q5KBJ8              	100.00%		F2SFL8              	100.00%
Bootstrap support for Q5KBJ8 as seed ortholog is 100%.
Bootstrap support for F2SFL8 as seed ortholog is 100%.

Group of orthologs #3191. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 T.rubrum:45

Q5KDB8              	100.00%		F2SF31              	100.00%
Bootstrap support for Q5KDB8 as seed ortholog is 100%.
Bootstrap support for F2SF31 as seed ortholog is 100%.

Group of orthologs #3192. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 T.rubrum:45

Q5KF36              	100.00%		F2SE98              	100.00%
Bootstrap support for Q5KF36 as seed ortholog is 100%.
Bootstrap support for F2SE98 as seed ortholog is 100%.

Group of orthologs #3193. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 T.rubrum:45

Q5KD81              	100.00%		F2SGK9              	100.00%
Bootstrap support for Q5KD81 as seed ortholog is 100%.
Bootstrap support for F2SGK9 as seed ortholog is 100%.

Group of orthologs #3194. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 T.rubrum:45

Q5KHJ0              	100.00%		F2SJQ2              	100.00%
Bootstrap support for Q5KHJ0 as seed ortholog is 100%.
Bootstrap support for F2SJQ2 as seed ortholog is 100%.

Group of orthologs #3195. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 T.rubrum:45

Q5KII6              	100.00%		F2SPA6              	100.00%
Bootstrap support for Q5KII6 as seed ortholog is 100%.
Bootstrap support for F2SPA6 as seed ortholog is 100%.

Group of orthologs #3196. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 T.rubrum:45

Q5K8A0              	100.00%		F2SZ43              	100.00%
Bootstrap support for Q5K8A0 as seed ortholog is 100%.
Bootstrap support for F2SZ43 as seed ortholog is 100%.

Group of orthologs #3197. Best score 45 bits
Score difference with first non-orthologous sequence - C.neoformans:45 T.rubrum:45

Q5KMI2              	100.00%		F2SPN7              	100.00%
Bootstrap support for Q5KMI2 as seed ortholog is 100%.
Bootstrap support for F2SPN7 as seed ortholog is 100%.

Group of orthologs #3198. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 T.rubrum:44

Q5KGU4              	100.00%		F2SSG2              	100.00%
                    	       		F2SH35              	8.36%
Bootstrap support for Q5KGU4 as seed ortholog is 100%.
Bootstrap support for F2SSG2 as seed ortholog is 100%.

Group of orthologs #3199. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 T.rubrum:44

Q5KEJ0              	100.00%		F2SH84              	100.00%
Bootstrap support for Q5KEJ0 as seed ortholog is 100%.
Bootstrap support for F2SH84 as seed ortholog is 100%.

Group of orthologs #3200. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 T.rubrum:44

Q5KP00              	100.00%		F2SCI6              	100.00%
Bootstrap support for Q5KP00 as seed ortholog is 100%.
Bootstrap support for F2SCI6 as seed ortholog is 100%.

Group of orthologs #3201. Best score 44 bits
Score difference with first non-orthologous sequence - C.neoformans:44 T.rubrum:44

Q5KNB1              	100.00%		F2SL27              	100.00%
Bootstrap support for Q5KNB1 as seed ortholog is 100%.
Bootstrap support for F2SL27 as seed ortholog is 100%.

Group of orthologs #3202. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 T.rubrum:43

Q5KAT5              	100.00%		F2SE51              	100.00%
Q5KAV5              	42.35%		F2SBU9              	6.04%
Bootstrap support for Q5KAT5 as seed ortholog is 100%.
Bootstrap support for F2SE51 as seed ortholog is 100%.

Group of orthologs #3203. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 T.rubrum:43

Q5K904              	100.00%		F2SR52              	100.00%
Bootstrap support for Q5K904 as seed ortholog is 100%.
Bootstrap support for F2SR52 as seed ortholog is 100%.

Group of orthologs #3204. Best score 43 bits
Score difference with first non-orthologous sequence - C.neoformans:43 T.rubrum:43

Q5KJ05              	100.00%		F2SMM9              	100.00%
Bootstrap support for Q5KJ05 as seed ortholog is 100%.
Bootstrap support for F2SMM9 as seed ortholog is 100%.

Group of orthologs #3205. Best score 42 bits
Score difference with first non-orthologous sequence - C.neoformans:42 T.rubrum:42

Q5KL41              	100.00%		F2SJE3              	100.00%
Bootstrap support for Q5KL41 as seed ortholog is 100%.
Bootstrap support for F2SJE3 as seed ortholog is 100%.

Group of orthologs #3206. Best score 40 bits
Score difference with first non-orthologous sequence - C.neoformans:40 T.rubrum:40

Q5KCU2              	100.00%		F2T075              	100.00%
Bootstrap support for Q5KCU2 as seed ortholog is 100%.
Bootstrap support for F2T075 as seed ortholog is 100%.